-- dump date   	20140619_004125
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
NP_878920.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
NP_878921.1	Similar to Pseudomonas putida glucose inhibited division protein B GidB SW:GIDB_PSEPU (P25757) (216 aa) fasta scores: E(): 1e-24, 42.593% id in 216 aa, and to Escherichia coli glucose inhibited division protein B GidB or B3740 or Z5240 or Ecs4682 SW:GIDB_ECOLI (P17113) (207 aa) fasta scores: E(): 1.2e-12, 39.000% id in 200 aa
NP_878922.1	Similar to Caulobacter crescentus chromosome partitioning protein ParA or Cc3753 SW:PARA_CAUCR (O05189) (267 aa) fasta scores: E(): 1.9e-46, 49.412% id in 255 aa, and to Bacillus subtilis sporulation initiation inhibitor protein Soj SW:SOJ_BACSU (P37522) (253 aa) fasta scores: E(): 2.7e-44, 48.988% id in 247 aa
NP_878923.1	Similar to Caulobacter crescentus acetyltransferase, GnaT family Cc2209 TR:Q9A685 (EMBL:AE005892) (207 aa) fasta scores: E(): 1.8e-07, 34.653% id in 202 aa, and to Rhizobium meliloti acetyltransferase Smc02449 TR:CAC47203 (EMBL:AL591791) (308 aa) fasta scores: E(): 6.1e-05, 31.818% id in 242 aa
NP_878924.1	Similar to Pseudomonas putida probable chromosome partitioning protein ParB SW:PARB_PSEPU (P31857) (290 aa) fasta scores: E(): 3.9e-40, 48.136% id in 295 aa
NP_878925.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
NP_878926.1	forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force
NP_878927.1	Modulates Rho-dependent transcription termination
NP_878928.1	binds directly to 23S ribosomal RNA
NP_878929.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
NP_878930.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
NP_878931.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
NP_878932.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
NP_878933.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter
NP_878934.1	no significant database matches
NP_878935.1	no significant database matches
NP_878936.1	Similar to Caulobacter crescentus peptidoglycan binding domain protein CC3326 TR:Q9A378 (EMBL:AE005994) (457 aa) fasta scores: E(): 3.3e-23, 33.711% id in 353 aa
NP_878937.1	Similar to Zymomonas mobilis aerobic respiration control protein ArcA TR:Q9X3W0 (EMBL:AF088896) (241 aa) fasta scores: E(): 2.5e-10, 30.638% id in 235 aa, and to Rhodobacter sphaeroides DmsR TR:O32479 (EMBL:D89075) (232 aa) fasta scores: E(): 1.6e-10, 28.632% id in 234 aa.
NP_878938.1	transposase for IS481 element
NP_878939.1	Similar to Methanothermobacter thermautotrophicus conserved protein Mth1398 TR:O27449 (EMBL:AE000902) (133 aa) fasta scores: E(): 4.2e-06, 32.692% id in 104 aa, and to Archaeoglobus fulgidus conserved hypothetical protein Af0284 TR:O29957 (EMBL:AE001085) (165 aa) fasta scores: E(): 3.7e-05, 22.936% id in 109 aa
NP_878940.1	Similar to Mycobacterium tuberculosis CDC1551 nonspecific lipid-transfer protein mt1663 TR:AAK45933 (EMBL:AE007030) (402 aa) fasta scores: E(): 5.1e-14, 27.229% id in 415 aa, and to Pseudomonas fluorescens PhlC TR:Q51727 (EMBL:U41818) (398 aa) fasta scores: E(): 5.2e-15, 27.188% id in 320 aa
NP_878941.1	Similar to Archaeoglobus fulgidus MaoC protein af2313 TR:O27971 (EMBL:AE000944) (151 aa) fasta scores: E(): 3.3e-19, 46.154% id in 143 aa, and to Rhodococcus spNCIMB 9784. fad-binding protein CampD TR:AAK50623 (EMBL:AF323755) (167 aa) fasta scores: E(): 2.4e-12, 33.562% id in 146 aa
NP_878942.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator pa0877 TR:Q9I568 (EMBL:AE004522) (298 aa) fasta scores: E(): 1e-17, 27.985% id in 268 aa, and to Rhizobium loti probable transcriptional regulator mlr2195 TR:Q98IY2 (EMBL:AP002999) (397 aa) fasta scores: E(): 3.5e-17, 29.825% id in 285 aa
NP_878943.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_878944.1	Similar to Methanothermobacter thermautotrophicus conserved protein mth965 TR:O27046 (EMBL:AE000870) (452 aa) fasta scores: E(): 1.2e-26, 31.308% id in 428 aa, and to Agrobacterium tumefaciens Agr_l_2924p agr_l_2924 TR:AAK90029 (EMBL:AE008346) (448 aa) fasta scores: E(): 8.3e-24, 29.888% id in 445 aa
NP_878945.1	transposase for IS481 element
NP_878946.1	Similar to Rhodococcus fascians chloramphenicol resistance protein TR:Q52751 (EMBL:Z12001) (391 aa) fasta scores: E(): 1.6e-10, 25.193% id in 389 aa, and to Rhodococcus rhodochrous CmrA TR:O30679 (EMBL:AF015087) (391 aa) fasta scores: E(): 4.2e-12, 25.326% id in 383 aa
NP_878947.1	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
NP_878948.1	Similar to Escherichia coli glycyl-tRNA synthetase beta chain GlyS or GlyS(b) or B3559 SW:SYGB_ECOLI (P00961) (688 aa) fasta scores: E(): 3e-69, 40.056% id in 709 aa, and to Pseudomonas aeruginosa glycyl-tRNA synthetase beta chain GlyS or PA0008 TR:Q9I7B8 (EMBL:AE004440) (684 aa) fasta scores: E(): 6.1e-70, 44.600% id in 713 aa
NP_878949.1	Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate
NP_878950.1	Similar to Neisseria meningitidis lysophosphatidic acid acyltransferase homolog NlaB or NMA0404 TR:Q9XDL6 (EMBL:AF036242) (247 aa) fasta scores: E(): 4.2e-32, 41.277% id in 235 aa, and to Pseudomonas aeruginosa probable acyltransferase PA0005 TR:Q9I7C1 (EMBL:AE004440) (257 aa) fasta scores: E(): 2.1e-37, 42.437% id in 238 aa
NP_878951.1	Similar to Rhizobium loti Mlr5068 protein TR:Q98CP0 (EMBL:AP003005) (252 aa) fasta scores: E(): 3.9e-08, 28.458% id in 253 aa, and to Rhizobium meliloti conserved hypothetical protein smc02768 TR:CAC41413 (EMBL:AL591782) (251 aa) fasta scores: E(): 5.6e-08, 25.306% id in 245 aa
NP_878952.1	Similar to Escherichia coli lactoylglutathione lyase GloA or B1651 or Z2669 or ECS2360 SW:LGUL_ECOLI (Q59384) (135 aa) fasta scores: E(): 5.1e-34, 67.939% id in 131 aa, and to Neisseria meningitidis lactoylglutathione lyase GloA or NMA2147 or NMB0340 SW:LGUL_NEIMA (O33393) (138 aa) fasta scores: E(): 1.2e-42, 78.626% id in 131 aa
NP_878953.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
NP_878954.1	transposase for IS481 element
NP_878955.1	Similar to the N-terminal region of Escherichia coli resolvase rsvB TR:Q9S0Z7 (EMBL:AB024946) (269 aa) fasta scores: E(): 5.2, 30.357% id in 112 aa
NP_878956.1	Similar to the C-terminal regions of Vibrio anguillarum transcriptional activator protein VanR SW:VANR_VIBAN (P74946) (240 aa) fasta scores: E(): 6.7e-09, 48.611% id in 72 aa, and to Rhizobium loti transcriptional regulator mlr5637 TR:Q98BC5 (EMBL:AP003007) (243 aa) fasta scores: E(): 5.4e-08, 52.459% id in 61 aa
NP_878957.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa0188 TR:Q9I6U6 (EMBL:AE004456) (293 aa) fasta scores: E(): 2e-25, 35.172% id in 290 aa, and to Vibrio cholerae hypothetical protein Vc1229 vc1229 TR:Q9KSM7 (EMBL:AE004202) (291 aa) fasta scores: E(): 5.7e-15, 31.034% id in 290 aa
NP_878958.1	Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine
NP_878959.1	Similar to Neisseria meningitidis hypothetical protein Nmb0939 TR:Q9JZQ6 (EMBL:AE002445) (193 aa) fasta scores: E(): 8.9e-38, 56.085% id in 189 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0389 TR:Q9I6A6 (EMBL:AE004476) (206 aa) fasta scores: E(): 6.1e-35, 48.705% id in 193 aa
NP_878960.1	transposase for IS481 element
NP_878961.1	Similar to Escherichia coli AmpG protein or b0433 or z0536 or ecs0487 SW:AMPG_ECOLI (P36670) (491 aa) fasta scores: E(): 2.6e-88, 61.168% id in 394 aa, and to Neisseria meningitidis  integral membrane signal transducer protein nma2127 TR:Q9JSU7 (EMBL:AL162758) (427 aa) fasta scores: E(): 1.9e-44, 42.711% id in 391 aa
NP_878962.1	Similar to Desulfurococcus sp aspartate racemase TR:P71164 (EMBL:D84067) (235 aa) fasta scores: E(): 8.8e-20, 34.529% id in 223 aa, and to Pyrococcus abyssi aspartate racemase RacD-1 or PAB0912 TR:Q9UYY1 (EMBL:AJ248287) (228 aa) fasta scores: E(): 2.3e-20, 32.479% id in 234 aa. Its C-terminus is similar to BP1272, 55.140% identity (55.140% ungapped) in 107 aa overlap.
NP_878963.1	Similar to Escherichia coli glutamate/aspartate transport system permease GltK or b0653 or z0803 or ecs0692 SW:GLTK_ECOLI (P41075) (224 aa) fasta scores: E(): 1.9e-38, 51.339% id in 224 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa1340 TR:Q9I404 (EMBL:AE004563) (222 aa) fasta scores: E(): 1.7e-37, 52.915% id in 223 aa. Similar to BP0767, 56.696% identity in 224 aa overlap
NP_878964.1	Similar to Escherichia coli glutamate/aspartate transport system permease GltJ or b0654 SW:GLTJ_ECOLI (P41074) (246 aa) fasta scores: E(): 1.6e-40, 42.623% id in 244 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter PA1341 TR:Q9I403 (EMBL:AE004563) (248 aa) fasta scores: E(): 6e-44, 47.737% id in 243 aa. Similar to BP0766 57.759% identity (58.515% ungapped) in 232 aa overlap
NP_878965.1	Similar to Escherichia coli amino acid ABC transporter binding protein precursor YbeJ or b0655 SW:YBEJ_ECOLI (P37902) (302 aa) fasta scores: E(): 2.3e-48, 45.263% id in 285 aa, and to Pseudomonas aeruginosa probable binding protein component of ABC transporter PA1342 TR:Q9I402 (EMBL:AE004563) (302 aa) fasta scores: E(): 3.4e-51, 48.658% id in 298 aa. Similar to BP0765 51.325% identity (52.013% ungapped) in 302 aa overlap
NP_878966.1	transposase for IS481 element
NP_878967.1	Similar to Caulobacter crescentus hypothetical protein Cc2770 TR:Q9A4R0 (EMBL:AE005942) (435 aa) fasta scores: E(): 1.6e-10, 28.947% id in 418 aa, and to Erwinia amylovora hypothetical 47.8 kDa protein TR:Q9F814 (EMBL:AF264948) (427 aa) fasta scores: E(): 2.6e-05, 28.453% id in 362 aa
NP_878968.1	Similar to Caulobacter crescentus transcriptional regulator Cro/ci family cc2771 TR:Q9A4Q9 (EMBL:AE005942) (119 aa) fasta scores: E(): 0.001, 36.458% id in 96 aa, and to Bradyrhizobium japonicum Id619 TR:Q9AN22 (EMBL:AF322013) (83 aa) fasta scores: E(): 0.11, 34.328% id in 67 aa
NP_878969.1	no significant database matches
NP_878971.1	Similar to Pseudomonas aeruginosa hypothetical 29.4 kDa protein TR:Q9RPF6 (EMBL:AF161263) (281 aa) fasta scores: E(): 1.1e-29, 35.294% id in 272 aa, and to Variovorax paradoxus 2,4-diphenoxyacetic acid gene cluster TR:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 3.4e-28, 34.572% id in 269 aa
NP_878972.1	Similar to Pseudomonas aeruginosa hypothetical protein PA4336 TR:Q9HW65 (EMBL:AE004850) (194 aa) fasta scores: E(): 5.5e-52, 66.492% id in 191 aa, and to Agrobacterium tumefaciens Agr_l_853p agr_l_853 TR:AAK88998 (EMBL:AE008241) (188 aa) fasta scores: E(): 3.3e-49, 63.102% id in 187 aa. Also similar to BP1542, 65.104% identity (65.104% ungapped) in 192 aa overlap.
NP_878973.1	Similar to Marinosulfonomonas methylotropha ferredoxin TR:AAK84303 (EMBL:AF354805) (123 aa) fasta scores: E(): 1.8e-07, 35.955% id in 89 aa, and to Burkholderia cepacia Tbc2C monooxygenase TR:Q9EZN9 (EMBL:AF282898) (111 aa) fasta scores: E(): 3.6e-07, 34.694% id in 98 aa
NP_878974.1	Similar to Marinosulfonomonas methylotropha reductase TR:AAK84310 (EMBL:AF360864) (364 aa) fasta scores: E(): 3.5e-26, 29.830% id in 352 aa, and to Alcaligenes faecalis ferredoxin reductase phnaA TR:Q9WXG6 (EMBL:AB024945) (342 aa) fasta scores: E(): 3.5e-20, 29.167% id in 336 aa
NP_878975.1	Similar to Pseudomonas aeruginosa probable C4-dicarboxylate transporter pa0886 TR:Q9I559 (EMBL:AE004523) (427 aa) fasta scores: E(): 2.3e-37, 32.812% id in 384 aa, and to Pseudomonas stutzeri probable C4-dicarboxylate transporter DctM TR:CAC44173 (EMBL:AJ313422) (426 aa) fasta scores: E(): 1.3e-36, 32.041% id in 387 aa
NP_878976.1	Similar to Escherichia coli  ABC transporter periplasmic binding protein YiaO precursor or b3579 SW:YIAO_ECOLI (P37676) (328 aa) fasta scores: E(): 2.2e-08, 27.046% id in 281 aa, and to Rhizobium meliloti C4-dicarboxylate transporter periplasmic solute-binding protein precursor smb20981 TR:CAC49506 (EMBL:AL603646) (325 aa) fasta scores: E(): 4.9e-10, 26.761% id in 284 aa
NP_878977.1	transposase for IS481 element
NP_878978.1	Similar to Rhizobium meliloti transposase for insertion sequence element IsrM1 TR:CAC47072 (EMBL:AL591790) (123 aa) fasta scores: E(): 1.1, 21.212% id in 99 aa, and to Caulobacter crescentus ISCC3 transposase OrfA cc2728 or cc0625 or cc2657 TR:Q99QI0 (EMBL:AE005939) (125 aa) fasta scores: E(): 1.2, 27.523% id in 109 aa
NP_878979.1	molecular chaperone
NP_878980.1	Similar to Rhodococcus spAD45 glutathione S-transferase IsoJ TR:Q9RBP3 (EMBL:AJ249207) (233 aa) fasta scores: E(): 2.2e-12, 30.732% id in 205 aa, and to Pseudomonas aeruginosa probable glutathione S-transferase pa2813 TR:Q9I030 (EMBL:AE004708) (206 aa) fasta scores: E(): 4.6e-39, 48.058% id in 206 aa
NP_878981.1	Similar to Escherichia coli AmpD protein or b0110 SW:AMPD_ECOLI (P13016) (183 aa) fasta scores: E(): 5e-35, 51.977% id in 177 aa, and to Pseudomonas aeruginosa N-acetyl-anhydromuramyl-L-alanine amidase AmpD or pa4522 TR:Q9ZGA0 (EMBL:AF082575) (188 aa) fasta scores: E(): 1.9e-37, 58.960% id in 173 aa
NP_878982.1	Similar to Pseudomonas stutzeri hypothetical 9.0 kDa protein TR:Q9RLD2 (EMBL:AJ249642) (77 aa) fasta scores: E(): 0.021, 33.333% id in 81 aa
NP_878983.1	Similar to Neisseria meningitidis hypothetical inner membrane protein nma2189 TR:Q9JSQ1 (EMBL:AL162758) (268 aa) fasta scores: E(): 2.2e-25, 37.184% id in 277 aa, and to Azospirillum brasilense hypothetical 28.8 kDa protein in nifR3-like 5'region SW:YNR3_AZOBR (P45674) (271 aa) fasta scores: E(): 1.6e-13, 31.707% id in 287 aa
NP_878984.1	Similar to Escherichia coli signal recognition particle protein Ffh or b2610 or z3904 or ecs3473 SW:SR54_ECOLI (P07019) (453 aa) fasta scores: E(): 1.4e-68, 63.169% id in 467 aa, and to Neisseria meningitidis signal recognition particle protein Ffh TR:Q9JPK6 (EMBL:AJ391261) (456 aa) fasta scores: E(): 2.4e-71, 63.539% id in 469 aa
NP_878985.1	transposase for IS481 element
NP_878986.1	Identical to the previously sequenced Bordetella pertussis DNA for lipopolysaccharide biosynthesis locus BplL TR:Q45387 (EMBL:X90711) (624 aa) fasta scores: E(): 0, 100.000% id in 624 aa, and to Bordetella bronchiseptica nucleotide sugar epimerase/dehydratase WlbL TR:O87995 (EMBL:AJ007747) (624 aa) fasta scores: E(): 0, 99.679% id in 624 aa
NP_878987.1	Identical to the previously sequenced Bordetella pertussis and Bordetella bronchiseptica DNA for lipopolysaccharide biosynthesis locus BplI or WlbI TR:Q45383 (EMBL:X90711) (233 aa) fasta scores: E(): 6.6e-87, 100.000% id in 233 aa
NP_878988.1	Identical to the previously sequenced Bordetella parapertussis  glcnac transferase WlbH TR:O52848 (EMBL:AJ224768) (390 aa) fasta scores: E(): 1.1e-153, 99.487% id in 390 aa, and to Bordetella pertussis and B. bronchiseptica hypothetical 42.8 kDa protein BplH or WlbH TR:Q45386 (EMBL:X90711) (390 aa) fasta scores: E(): 2.2e-154, 99.744% id in 390 aa
NP_878989.1	Identical to the previously sequenced Bordetella pertussis DNA for lipopolysaccharide biosynthesis locus BplG TR:Q45382 (EMBL:X90711) (197 aa) fasta scores: E(): 2.6e-77, 100.000% id in 197 aa, and to Bordetella bronchiseptica  transferase WlbG TR:O87997 (EMBL:AJ007747) (197 aa) fasta scores: E(): 2.9e-76, 98.477% id in 197 aa
NP_878990.1	Identical to the previously sequenced Bordetella pertussis DNA for lipopolysaccharide biosynthesis locus BplF TR:Q45381 (EMBL:X90711) (395 aa) fasta scores: E(): 2.2e-156, 100.000% id in 395 aa, and to Bordetella bronchiseptica  amino-sugar biosynthesis protein WlbF TR:O87998 (EMBL:AJ007747) (395 aa) fasta scores: E(): 6.6e-154, 98.734% id in 395 aa
NP_878991.1	Identical to the previously sequenced Bordetella pertussis DNA for lipopolysaccharide biosynthesis locus BplE TR:Q45380 (EMBL:X90711) (403 aa) fasta scores: E(): 1.2e-163, 100.000% id in 403 aa, and to Bordetella bronchiseptica  transferase WlbE TR:O87999 (EMBL:AJ007747) (419 aa) fasta scores: E(): 6.7e-170, 99.523% id in 419 aa
NP_878992.1	Identical to the previously sequenced Bordetella pertussis DNA for lipopolysaccharide biosynthesis locus BplD TR:Q45379 (EMBL:X90711) (362 aa) fasta scores: E(): 1.8e-139, 100.000% id in 362 aa, and to Bordetella bronchiseptica  UDP-N-acetylglucosamine 2-epimerase WlbD TR:O88000 (EMBL:AJ007747) (362 aa) fasta scores: E(): 2.3e-138, 99.724% id in 362 aa
NP_878993.1	Identical to the previously sequenced Bordetella pertussis DNA for lipopolysaccharide biosynthesis locus BplC TR:Q45378 (EMBL:X90711) (366 aa) fasta scores: E(): 6.7e-144, 100.000% id in 366 aa, and to Bordetella bronchiseptica  amino-sugar biosynthesis protein WlbC TR:O88001 (EMBL:AJ007747) (366 aa) fasta scores: E(): 2.5e-143, 99.454% id in 366 aa
NP_878994.1	Identical to the previously sequenced Bordetella pertussis and Bordetella bronchiseptica DNA for lipopolysaccharide biosynthesis locus BplB or WlbB TR:Q45377 (EMBL:X90711) (191 aa) fasta scores: E(): 4.3e-79, 100.000% id in 191 aa, and to Pseudomonas aeruginosa probable acetyltransferase WbpD TR:P72135 (EMBL:U50396) (163 aa) fasta scores: E(): 4.2e-48, 77.483% id in 151 aa
NP_878995.1	Identical to Bordetella pertussis and Bordetella bronchiseptica DNA for lipopolysaccharide biosynthesis locus BplA or WlbA TR:Q45376 (EMBL:X90711) (350 aa) fasta scores: E(): 1.2e-144, 100.000% id in 350 aa, and similar to Vibrio anguillarum  dehydrogenase TR:Q9XBT9 (EMBL:AF156256) (318 aa) fasta scores: E(): 3.8e-83, 63.722% id in 317 aa
NP_878996.1	Identical to the previously sequenced Bordetella pertussis DNA for lipopolysaccharide biosynthesis locus RfaC TR:Q45375 (EMBL:X90711) (335 aa) fasta scores: E(): 6.2e-133, 100.000% id in 335 aa, and to Bordetella bronchiseptica  heptosyltransferase WaaC TR:O88002 (EMBL:AJ007747) (335 aa) fasta scores: E(): 1.3e-132, 99.701% id in 335 aa, and Similar to Escherichia coli lipopolysaccharide heptosyltransferase-1 RfaC or WaaC or Rfa-2 or B3621 SW:RFAC_ECOLI (P24173) (319 aa) fasta scores: E(): 7.6e-31, 48.485% id in 297 aa
NP_878997.1	Identical to the previously sequenced Bordetella pertussis DNA for lipopolysaccharide biosynthesis locus KdtA TR:Q45374 (EMBL:X90711) (428 aa) fasta scores: E(): 2.9e-167, 100.000% id in 428 aa, and to Bordetella bronchiseptica  3-deoxy-D-manno-octulosonic-acid transferase WaaA TR:O88003 (EMBL:AJ007747) (428 aa) fasta scores: E(): 2.1e-166, 99.533% id in 428 aa, and similar to Escherichia coli 3-deoxy-D-manno-octulosonic-acid transferase KdtA or WaaA or B3633 or Z5057 or ECS4508 SW:KDTA_ECOLI (P23282) (425 aa) fasta scores: E(): 8.9e-46, 39.450% id in 436 aa
NP_878998.1	Identical to the previously sequenced Bordetella bronchiseptica  secreted protein Bblps1.35C TR:O88004 (EMBL:AJ007747) (51 aa) fasta scores: E(): 2.6e-20, 100.000% id in 51 aa
NP_878999.1	type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP
NP_879000.1	Identical to the previously sequenced Bordetella pertussis  biotin protein ligase BirA TR:Q9ZIU6 (EMBL:AF016461) (288 aa) fasta scores: E(): 1.2e-110, 100.000% id in 288 aa, and Similar to Escherichia coli BirA bifunctional protein [includes: biotin operon repressor; biotin--[acetyl-coa-carboxylase] synthetase BirA or BioR or DhbB or B3973 SW:BIRA_ECOLI (P06709) (321 aa) fasta scores: E(): 9.5e-13, 32.130% id in 277 aa
NP_879001.1	Similar to Caulobacter crescentus  ABC transporter permease, Cc2318 TR:Q9A5X9 (EMBL:AE005902) (371 aa) fasta scores: E(): 2.2e-35, 35.925% id in 373 aa, and to Campylobacter jejuni  ABC transport system permease iamb or cj1646 TR:Q9PM30 (EMBL:AL139079) (369 aa) fasta scores: E(): 3.2e-31, 34.451% id in 328 aa
NP_879002.1	Similar to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter Pa3212 TR:Q9HZ28 (EMBL:AE004744) (264 aa) fasta scores: E(): 1.3e-42, 54.251% id in 247 aa, and to Caulobacter crescentus ABC transporter ATP-binding protein cc2319 TR:Q9A5X8 (EMBL:AE005902) (278 aa) fasta scores: E(): 2e-42, 54.032% id in 248 aa
NP_879003.1	Similar to Agrobacterium tumefaciens Agr_c_3031p TR:AAK87420 (EMBL:AE008086) (201 aa) fasta scores: E(): 2.5e-05, 31.551% id in 187 aa, and to Rhizobium meliloti hypothetical protein Smc00177 TR:CAC46409 (EMBL:AL591788) (204 aa) fasta scores: E(): 0.00019, 28.042% id in 189 aa
NP_879004.1	Similar to Neisseria meningitidis hypothetical protein Nmb0868 TR:Q9JZW7 (EMBL:AE002439) (213 aa) fasta scores: E(): 4.5e-24, 43.578% id in 218 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4440 TR:Q9HVX5 (EMBL:AE004858) (209 aa) fasta scores: E(): 2.9e-19, 40.909% id in 220 aa
NP_879005.1	Similar to Escherichia coli penicillin-binding protein 6 precursor DacC or B0839 SW:DACC_ECOLI (P08506) (400 aa) fasta scores: E(): 3.9e-51, 46.703% id in 364 aa, and to Pseudomonas aeruginosa penicillin-binding protein 5 precursor DacA or DacC or PA3999 TR:Q9X6V7 (EMBL:AF147448) (386 aa) fasta scores: E(): 1.3e-54, 45.528% id in 369 aa
NP_879006.1	Similar to Staphylococcus aureus D-alanine aminotransferase TR:Q9KWZ6 (EMBL:Y14816) (282 aa) fasta scores: E(): 3.7e-37, 38.849% id in 278 aa, and to Staphylococcus haemolyticus D-alanine aminotransferase Dat SW:DAAA_STAHA (P54694) (282 aa) fasta scores: E(): 1.1e-38, 38.989% id in 277 aa
NP_879007.1	Similar to Neisseria meningitidis hypothetical protein Nma1380 or Nmb1218 TR:Q9JRI4 (EMBL:AL162755) (91 aa) fasta scores: E(): 4.4e-11, 46.988% id in 83 aa, and to Escherichia coli hypothetical protein YbeD or B0631 or Z0776 or ECS0669 SW:YBED_ECOLI (P30977) (87 aa) fasta scores: E(): 4.4e-06, 38.554% id in 83 aa
NP_879008.1	lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein
NP_879009.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
NP_879010.1	Similar to Escherichia coli dTDP-4-dehydrorhamnose 3,5-epimerase RfbC or RmlC or B2038 SW:RFBC_ECOLI (P37745) (185 aa) fasta scores: E(): 8.2e-34, 52.326% id in 172 aa, and to Pseudomonas aeruginosa dTDP-4-dehydrorhamnose 3,5-epimerase RmlC or PA5164 TR:Q9HU21 (EMBL:AE004929) (181 aa) fasta scores: E(): 4.6e-49, 64.641% id in 181 aa
NP_879011.1	Similar to Escherichia coli dTDP-4-dehydrorhamnose reductase RfbD or RmlD or B2040 SW:RBD1_ECOLI (P37760) (299 aa) fasta scores: E(): 2.6e-40, 44.444% id in 297 aa, and to Pseudomonas aeruginosa dTDP-4-dehydrorhamnose reductase RmlD or PA5162 TR:Q9HU23 (EMBL:AE004929) (302 aa) fasta scores: E(): 7.8e-44, 47.651% id in 298 aa
NP_879012.1	Similar to Escherichia coli dTDP-glucose 4,6-dehydratase RfbB or RmlB or B2041 SW:RBB1_ECOLI (P37759) (361 aa) fasta scores: E(): 4.6e-73, 52.925% id in 359 aa, and to Pseudomonas aeruginosa dTDP-D-glucose 4,6-dehydratase RmlB or PA5161 TR:Q9HU24 (EMBL:AE004929) (352 aa) fasta scores: E(): 4e-92, 64.672% id in 351 aa
NP_879013.1	transposase for IS481 element
NP_879014.1	Similar to Bordetella avium cystathionine beta-lyase MetC SW:METC_BORAV (Q07703) (395 aa) fasta scores: E(): 1.1e-130, 79.747% id in 395 aa, and to Escherichia coli cystathionine beta-lyase MetC or B3008 SW:METC_ECOLI (P06721) (395 aa) fasta scores: E(): 5.5e-48, 36.567% id in 402 aa. Also similar to BP0815, 42.784% identity in 388 aa overlap
NP_879015.1	Similar to Burkholderia cepacia thiol:disulfide interchange protein DsbA precursor SW:DSBA_BURCE (Q9RHV8) (212 aa) fasta scores: E(): 1e-22, 36.620% id in 213 aa, and to Azotobacter vinelandii thiol:disulfide interchange protein DsbA precursor SW:DSBA_AZOVI (Q44504) (214 aa) fasta scores: E(): 2.5e-22, 37.619% id in 210 aa
NP_879016.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa5052 TR:Q9HUC7 (EMBL:AE004918) (231 aa) fasta scores: E(): 0.001, 28.807% id in 243 aa, and to Xylella fastidiosa hypothetical protein Xf0146 TR:Q9PH00 (EMBL:AE003868) (252 aa) fasta scores: E(): 6.8e-05, 29.167% id in 192 aa
NP_879017.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
NP_879018.1	Similar to Ralstonia solanacearum hypothetical protein Rsc0288 or Rs03255 SWALL:Q8Y2P7 (EMBL:AL646058) (105 aa) fasta scores: E(): 0.0019, 32.74% id in 113 aa
NP_879019.1	no significant database matches
NP_879020.1	Similar to Neisseria meningitidis invertase/transposase nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter spSE19. pilin inverting protein chnY TR:Q9F7E1 (EMBL:AF282240) (324 aa) fasta scores: E(): 8.2e-50, 47.516% id in 322 aa
NP_879021.1	Similar to Thermotoga maritima sugar ABC transporter permease Tm0598 TR:Q9WZ67 (EMBL:AE001734) (277 aa) fasta scores: E(): 3.9e-36, 43.860% id in 228 aa, and to Rhizobium meliloti  sugar ABC transporter permease Smb20233 TR:CAC48624 (EMBL:AL603642) (282 aa) fasta scores: E(): 2.5e-30, 34.717% id in 265 aa
NP_879022.1	Similar to Erwinia chrysanthemi inner membrane protein togM TR:CAC44118 (EMBL:AJ305144) (296 aa) fasta scores: E(): 9.7e-31, 37.091% id in 275 aa, and to Rhizobium loti permease of sugar ABC transporter mll1715 TR:Q98JZ2 (EMBL:AP002998) (307 aa) fasta scores: E(): 6.2e-41, 40.569% id in 281 aa
NP_879023.1	Similar to Escherichia coli glycerol-3-phosphate-binding periplasmic protein precursor UgpB or B3453 SW:UGPB_ECOLI (P10904) (438 aa) fasta scores: E(): 1.1e-30, 29.120% id in 443 aa, and to Thermotoga maritima glycerol-3-phosphate ABC transporter periplasmic glycerol-3- phosphate-binding protein Tm1120 TR:Q9X0K4 (EMBL:AE001770) (436 aa) fasta scores: E(): 3.1e-35, 31.829% id in 421 aa
NP_879024.1	Similar to Thermococcus litoralis trehalose/maltose transport ATP-hydrolyzing subunit MalK TR:Q9V306 (EMBL:AF126010) (372 aa) fasta scores: E(): 7.4e-44, 45.205% id in 365 aa, and to Rhizobium meliloti probable glycerol-3-phosphate ABC transporter ATP-binding protein TR:CAC48805 (EMBL:AL603643) (349 aa) fasta scores: E(): 2.1e-49, 50.000% id in 352 aa
NP_879025.1	Similar to Escherichia coli Icc protein or B3032 or Z4389 or ECS3920 SW:ICC_ECOLI (P36650) (275 aa) fasta scores: E(): 1.7e-14, 27.509% id in 269 aa, and to Rhizobium loti 3',5'-cyclic-nucleotide phosphodiesterase CpdA or Mll3631 TR:Q98FT1 (EMBL:AP003002) (305 aa) fasta scores: E(): 7.1e-25, 36.078% id in 255 aa
NP_879026.1	transposase for IS481 element
NP_879027.1	Similar to Rhizobium loti ABC transporter permease Mlr9016 TR:Q982L0 (EMBL:AP003015) (278 aa) fasta scores: E(): 9.8e-17, 31.395% id in 258 aa, and to Treponema pallidum spermidine/putrescine ABC transporter permease Tp0654 TR:O83660 (EMBL:AE001240) (272 aa) fasta scores: E(): 5.7e-13, 28.077% id in 260 aa
NP_879028.1	Similar to Campylobacter jejuni  periplasmic solute-binding protein Cj0727 TR:Q9PPI0 (EMBL:AL139076) (348 aa) fasta scores: E(): 1.5e-26, 32.333% id in 300 aa, and to Rhizobium loti ABC transporter periplasmic binding protein Mll3069 TR:Q98H18 (EMBL:AP003001) (368 aa) fasta scores: E(): 2.8e-24, 33.981% id in 309 aa
NP_879029.1	Similar to Pseudomonas putida amidase SW:AMID_PSEPU (O69768) (466 aa) fasta scores: E(): 6.3e-24, 35.526% id in 380 aa, and to Bradyrhizobium japonicum malonamidase E2 TR:Q9ZIV5 (EMBL:AF012735) (432 aa) fasta scores: E(): 2.5e-34, 39.012% id in 405 aa. Also similar to BP3713 (45.679% identity in 405 aa overlap)
NP_879030.1	Similar to Rhizobium meliloti 2-isopropylmalate synthase LeuA SW:LEU1_RHIME (Q9X7L2) (569 aa) fasta scores: E(): 5e-105, 49.374% id in 559 aa, and to Pseudomonas aeruginosa 2-isopropylmalate synthase LeuA or PA3792 TR:Q9HXK5 (EMBL:AE004798) (592 aa) fasta scores: E(): 7.9e-135, 58.803% id in 568 aa. The N-terminal region of this CDS is similar to BP0287, 68.598% identity (68.598% ungapped) in 328 aa overlap
NP_879031.1	no significant database matches
NP_879032.1	Similar to Escherichia coli RNA polymerase sigma-54 factor RpoN or GlnF or NtrA or B3202 SW:RP54_ECOLI (P24255) (477 aa) fasta scores: E(): 2.1e-63, 42.946% id in 482 aa, and to Alcaligenes eutrophus RNA polymerase sigma-54 factor TR:Q9EX69 (EMBL:AJ131690) (492 aa) fasta scores: E(): 9.5e-66, 49.600% id in 500 aa
NP_879033.1	Similar to Azotobacter vinelandii bacterioferritin-associated ferredoxin Bfd TR:Q9Z5W9 (EMBL:AF121138) (73 aa) fasta scores: E(): 0.004, 40.426% id in 47 aa, and to Neisseria meningitidis  ferredoxin Nma0965 or Nmb0752 TR:Q9JQR7 (EMBL:AL162754) (66 aa) fasta scores: E(): 4.5e-08, 53.704% id in 54 aa
NP_879034.1	Similar to Escherichia coli probable transcriptional regulator LrhA or GenR or B2289 SW:LRHA_ECOLI (P36771) (312 aa) fasta scores: E(): 5.4e-21, 33.212% id in 274 aa, and to Rhizobium meliloti LysR-family transcriptional regulator Sma1979 TR:AAK65745 (EMBL:AE007294) (290 aa) fasta scores: E(): 6.7e-40, 49.810% id in 263 aa
NP_879035.1	transposase for IS481 element
NP_879036.1	threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway
NP_879037.1	Similar to Neisseria meningitidis oxidoreductase, nmb0998 TR:Q9JZL6 (EMBL:AE002451) (1277 aa) fasta scores: E(): 3e-169, 61.515% id in 1307 aa
NP_879038.1	Similar to Deinococcus radiodurans transcriptional regulator, GntR family Dr0815 TR:Q9RW54 (EMBL:AE001936) (267 aa) fasta scores: E(): 1.7e-09, 30.041% id in 243 aa, and to Bacillus subtilis hypothetical transcriptional regulator YdhC SW:YDHC_BACSU (O05494) (224 aa) fasta scores: E(): 3e-10, 29.469% id in 207 aa
NP_879039.1	Identical to the N-terminal region of Bordetella pertussis hypothetical 29.3 kDa protein TR:O30450 (EMBL:AF006000) (273 aa) fasta scores: E(): 9.8e-105, 100.000% id in 273 aa, and similar to Pseudomonas aeruginosa hypothetical protein PA0446 TR:Q9I672 (EMBL:AE004482) (407 aa) fasta scores: E(): 2.7e-92, 57.248% id in 407 aa. Also similar to BP1779 (68.059% identity in 407 aa overlap), and BP3309 (57.143% identity in 399 aa overlap).
NP_879040.1	This CDS start with an isoleucine, whereas parapertussis and bronchiseptica start with a methionine. The sequence has been checked and believed to be correct. Identical to the previously sequenced Bordetella pertussis hypothetical 34.3 kDa protein TR:O30449 (EMBL:AF006000) (324 aa) fasta scores: E(): 2.8e-116, 100.000% id in 303 aa, and to Acinetobacter spSE19. acetyl-hydrolase chnC TR:Q9F7D7 (EMBL:AF282240) (300 aa) fasta scores: E(): 1.8e-28, 34.507% id in 284 aa. Also similar to BP2097, 39.583% identity in 288 aa overlap
NP_879041.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_879042.1	Identical to the previously sequenced Bordetella pertussis hypothetical 34.9 kDa protein in brg1 3'region precursor SW:YBR5_BORPE (O30446) (323 aa) fasta scores: E(): 6.7e-122, 100.000% id in 323 aa, and similar to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 8.9e-35, 35.220% id in 318 aa
NP_879043.1	Identical to the previously sequenced Bordetella pertussis hypothetical 29.0 kDa protein TR:O30445 (EMBL:AF006000) (260 aa) fasta scores: E(): 2.1e-107, 100.000% id in 260 aa, and similar to Pseudomonas aeruginosa probable transcriptional regulator pa1630 TR:Q9I392 (EMBL:AE004590) (288 aa) fasta scores: E(): 3e-31, 40.329% id in 243 aa
NP_879044.1	Identical to the previously sequenced Bordetella pertussis hypothetical 59.5 kDa protein TR:O30443 (EMBL:AF006000) (568 aa) fasta scores: E(): 2.8e-122, 100.000% id in 326 aa, and similar to Bacillus halodurans Bh1818 protein TR:Q9KBV6 (EMBL:AP001513) (331 aa) fasta scores: E(): 2.6e-41, 43.344% id in 323 aa
NP_879045.1	Identical to the previously sequenced Bordetella pertussis hypothetical 59.5 kDa protein TR:O30443 (EMBL:AF006000) (568 aa) fasta scores: E(): 3.9e-82, 99.103% id in 223 aa, and similar to Bacillus halodurans Bh1817 protein TR:Q9KBV7 (EMBL:AP001513) (225 aa) fasta scores: E(): 2.6e-26, 44.144% id in 222 aa
NP_879046.1	Identical to the previously sequenced Bordetella pertussis hypothetical 15.6 kDa protein TR:O30442 (EMBL:AF006000) (143 aa) fasta scores: E(): 6.4e-60, 100.000% id in 143 aa, and similar to Pseudomonas aeruginosa probable ring-cleaving dioxygenase Pa0817 TR:Q9I5C2 (EMBL:AE004517) (141 aa) fasta scores: E(): 6.1e-33, 60.584% id in 137 aa
NP_879047.1	Identical to the previously sequenced Bordetella pertussis Brg1 TR:O30441 (EMBL:AF006000) (291 aa) fasta scores: E(): 6.6e-108, 99.656% id in 291 aa, and similar to Pseudomonas aeruginosa probable transcriptional regulator pa0816 TR:Q9I5C3 (EMBL:AE004516) (294 aa) fasta scores: E(): 1.9e-38, 46.259% id in 294 aa
NP_879048.1	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate
NP_879049.1	Similar to Pasteurella multocida hypothetical protein Pm1939 TR:Q9CJQ5 (EMBL:AE006230) (151 aa) fasta scores: E(): 1.5e-25, 51.370% id in 146 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4714 TR:Q9HV84 (EMBL:AE004885) (149 aa) fasta scores: E(): 8.1e-21, 46.853% id in 143 aa
NP_879050.1	Similar to Escherichia coli sensor kinase CusS or B0570 SW:CUSS_ECOLI (P77485) (480 aa) fasta scores: E(): 3e-34, 33.124% id in 477 aa, and to Pseudomonas aeruginosa probable two-component sensor pa1438 TR:Q9I3Q9 (EMBL:AE004573) (481 aa) fasta scores: E(): 1e-37, 35.177% id in 452 aa
NP_879051.1	Similar to Escherichia coli transcriptional regulatory protein PcoR SW:PCOR_ECOLI (Q47456) (226 aa) fasta scores: E(): 4.7e-46, 53.846% id in 221 aa, and to Pseudomonas aeruginosa probable two-component response regulator Pa1437 TR:Q9I3R0 (EMBL:AE004573) (229 aa) fasta scores: E(): 9.4e-56, 63.393% id in 224 aa
NP_879052.1	Similar to Escherichia coli phosphate regulon sensor protein PhoR or NmpB or B0400 SW:PHOR_ECOLI (P08400) (431 aa) fasta scores: E(): 1e-55, 41.458% id in 439 aa, and to Klebsiella pneumoniae phosphate regulon sensor protein PhoR SW:PHOR_KLEPN (P45608) (431 aa) fasta scores: E(): 3.2e-55, 40.961% id in 437 aa
NP_879053.1	Similar to Escherichia coli phosphate regulon transcriptional regulatory protein PhoB or B0399 or Z0497 or ECS0449 SW:PHOB_ECOLI (P08402) (229 aa) fasta scores: E(): 2.6e-52, 59.211% id in 228 aa, and to Vibrio cholerae DNA-binding response regulator PhoB or VC0719 TR:Q9KU11 (EMBL:AE004158) (229 aa) fasta scores: E(): 1.3e-54, 60.526% id in 228 aa
NP_879054.1	Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone
NP_879055.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa5528 TR:Q9HT45 (EMBL:AE004965) (284 aa) fasta scores: E(): 1.7e-05, 35.294% id in 323 aa, and to Agrobacterium tumefaciens Agr_l_2266p agr_l_2266 TR:AAK89700 (EMBL:AE008313) (378 aa) fasta scores: E(): 2.7e-05, 28.075% id in 374 aa
NP_879056.1	Similar to Escherichia coli hypothetical 22.2 kDa protein in ubiE-rfaH intergenic region YigP or B3834 SW:YIGP_ECOLI (P27852) (201 aa) fasta scores: E(): 0.0058, 27.397% id in 219 aa, and to Vibrio cholerae hypothetical protein Vc0084 TR:Q9KVQ5 (EMBL:AE004099) (207 aa) fasta scores: E(): 0.00021, 24.413% id in 213 aa
NP_879057.1	an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions
NP_879058.1	transposase for IS481 element
NP_879059.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa1451 TR:Q9I3Q0 (EMBL:AE004574) (447 aa) fasta scores: E(): 4.6e-21, 48.387% id in 217 aa, and to Rhizobium loti Mll4127 protein Mll4127 TR:Q98EQ9 (EMBL:AP003003) (294 aa) fasta scores: E(): 3.1e-18, 37.011% id in 281 aa
NP_879060.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa0537 TR:Q9I5Z9 (EMBL:AE004490) (202 aa) fasta scores: E(): 8.8e-51, 71.981% id in 207 aa, and to Rhizobium loti Mll4130 protein TR:Q98EQ7 (EMBL:AP003003) (212 aa) fasta scores: E(): 2.3e-29, 48.205% id in 195 aa
NP_879061.1	Similar to Escherichia coli  ATP-dependent RNA helicase RhlE or B0797 SW:RHLE_ECOLI (P25888) (454 aa) fasta scores: E(): 9.3e-80, 58.658% id in 462 aa, and to Anabaena variabilis dead box RNA helicase homolog CrhA TR:Q9ZI52 (EMBL:AF040045) (425 aa) fasta scores: E(): 4e-74, 59.953% id in 422 aa. Also similar to BP3395 (50.740% identity in 473 aa overlap), and to BP3057 (41.314% identity in 472 aa overlap).
NP_879062.1	Similar to Escherichia coli homoserine/homoserine lactone efflux protein RhtB or B3824 SW:RHTB_ECOLI (P27847) (206 aa) fasta scores: E(): 2e-23, 37.198% id in 207 aa, and to Pseudomonas aeruginosa hypothetical protein Pa5249 TR:Q9HTU5 (EMBL:AE004937) (209 aa) fasta scores: E(): 4.7e-39, 54.106% id in 207 aa. Also similar to BP0568, 42.654% identity in 211 aa overlap
NP_879063.1	stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein
NP_879064.1	Similar to Mycobacterium leprae hypothetical proline rich protein Ml1505 TR:Q9CBW9 (EMBL:AL583922) (182 aa) fasta scores: E(): 7, 23.977% id in 171 aa
NP_879065.1	Similar to Escherichia coli bacterioferritin Bfr or B3336 SW:BFR_ECOLI (P11056) (158 aa) fasta scores: E(): 7.8e-33, 60.759% id in 158 aa, and to Pseudomonas aeruginosa bacterioferritin BfrB or Pa3531 TR:Q9HY79 (EMBL:AE004773) (158 aa) fasta scores: E(): 5.6e-39, 68.790% id in 157 aa
NP_879066.1	transposase for IS481 element
NP_879067.1	Similar to Synechocystis sp hypothetical 31.6 kDa protein Slr0841 TR:Q55426 (EMBL:D64003) (291 aa) fasta scores: E(): 3.1e-05, 31.081% id in 148 aa, and to Escherichia coli heat shock protein HslJ or B1379 SW:HSLJ_ECOLI (P52644) (140 aa) fasta scores: E(): 0.38, 28.571% id in 84 aa. Also similar to the N-terminal region of the adjacent CDS, BP0178, 44.643% identity (46.584% ungapped) in 168 aa overlap
NP_879068.1	Similar to Synechocystis sp hypothetical 31.6 kDa protein slr0841 TR:Q55426 (EMBL:D64003) (291 aa) fasta scores: E(): 0.00023, 33.775% id in 151 aa. Its N-terminal region is similar to the adjacent CDS, BP0177, 44.643% identity (46.584% ungapped) in 168 aa overlap
NP_879069.1	Similar to Xylella fastidiosa hypothetical protein Xf2609 TR:Q9PAA9 (EMBL:AE004068) (299 aa) fasta scores: E(): 9.9e-46, 55.230% id in 239 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0858 TR:Q9I583 (EMBL:AE004520) (312 aa) fasta scores: E(): 1.2e-32, 42.017% id in 238 aa
NP_879070.1	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content
NP_879071.1	Similar to Rhizobium meliloti hypothetical/unknown transmembrane protein Smc03794 TR:CAC47756 (EMBL:AL591793) (83 aa) fasta scores: E(): 4.5, 30.488% id in 82 aa
NP_879072.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3481 TR:Q9HYC8 (EMBL:AE004769) (364 aa) fasta scores: E(): 6.1e-63, 54.270% id in 363 aa, and to Xylella fastidiosa polysaccharide export protein Xf2301 TR:Q9PB44 (EMBL:AE004041) (303 aa) fasta scores: E(): 3.8e-62, 67.424% id in 264 aa. Also similar to BP1467, 60.000% identity (60.167% ungapped) in 360 aa overlap.
NP_879073.1	Similar to Xanthomonas oryzae pvoryzae  outer membrane protein TR:Q9EY32 (EMBL:AY010120) (593 aa) fasta scores: E(): 8.2e-16, 24.540% id in 652 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2543 TR:Q9I0U1 (EMBL:AE004682) (579 aa) fasta scores: E(): 9.1e-13, 24.342% id in 608 aa
NP_879074.1	Similar to Neisseria meningitidis  periplasmic protein Nma0295 TR:Q9JWM6 (EMBL:AL162752) (1371 aa) fasta scores: E(): 1.4e-18, 23.644% id in 1383 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2542 TR:Q9I0U2 (EMBL:AE004682) (1221 aa) fasta scores: E(): 7.2e-14, 27.344% id in 1280 aa
NP_879075.1	Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis
NP_879076.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa0803 TR:Q9I5D5 (EMBL:AE004515) (146 aa) fasta scores: E(): 1.4e-32, 61.111% id in 144 aa, and to Rhizobium loti Mlr1197 protein TR:Q98L34 (EMBL:AP002996) (137 aa) fasta scores: E(): 3.1e-19, 44.203% id in 138 aa
NP_879077.1	Similar to Streptomyces coelicolor  lyase Sci7.11C TR:Q9X9X9 (EMBL:AL096743) (130 aa) fasta scores: E(): 0.0041, 33.846% id in 130 aa, and to Streptomyces sp daunomycin C-14 hydroxylase TR:Q55078 (EMBL:U50973) (275 aa) fasta scores: E(): 0.015, 29.851% id in 134 aa
NP_879078.1	Similar to the C-terminal regions of Deinococcus radiodurans conserved hypothetical protein Dr0535 TR:Q9RWY0 (EMBL:AE001911) (825 aa) fasta scores: E(): 1.1, 29.762% id in 168 aa, and to Neisseria meningitidis alanyl-tRNA synthetase Nmb1595 TR:Q9JYG6 (EMBL:AE002510) (874 aa) fasta scores: E(): 1.2, 27.273% id in 154 aa
NP_879079.1	Similar to Escherichia coli biodegradative arginine decarboxylase AdiA or Adi or B4117 SW:ADIA_ECOLI (P28629) (755 aa) fasta scores: E(): 4.9e-69, 38.070% id in 767 aa, and to Pseudomonas aeruginosa probable orn/arg/lys decarboxylase Pa1818 TR:Q9I2S7 (EMBL:AE004608) (751 aa) fasta scores: E(): 3.1e-150, 49.340% id in 758 aa
NP_879080.1	Similar to Rhizobium meliloti conserved hypothetical protein Smc00763 TR:CAC45279 (EMBL:AL591784) (394 aa) fasta scores: E(): 4.8e-59, 57.431% id in 397 aa, and to Haemophilus influenzae hypothetical protein Hi0933 SW:YHIN_HAEIN (P44941) (401 aa) fasta scores: E(): 5.7e-65, 44.444% id in 396 aa
NP_879081.1	transposase for IS481 element
NP_879082.1	Previously sequenced as Bordetella pertussis superoxide dismutase [Mn] SodA SW:SODM_BORPE (P53642) (211 aa) fasta scores: E(): 1.1e-85, 100.000% id in 211 aa, and similar to Pseudomonas putida superoxide dismutase [Mn] SodA SW:SODM_PSEPU (P77929) (203 aa) fasta scores: E(): 1.4e-58, 73.399% id in 203 aa. Also similar to BP2761, 40.201% identity (41.885% ungapped) in 199 aa overlap.
NP_879083.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa4467 TR:Q9HVV1 (EMBL:AE004860) (310 aa) fasta scores: E(): 2.5e-41, 54.864% id in 257 aa, and to Myxococcus xanthus GufA protein SW:GUFA_MYXXA (Q06916) (254 aa) fasta scores: E(): 2.1e-36, 49.412% id in 255 aa. Also similar to BP2140, 47.458% identity (47.782% ungapped) in 295 aa overlap.
NP_879084.1	catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein
NP_879085.1	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor
NP_879086.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine
NP_879087.1	Similar to Escherichia coli  L-lactate dehydrogenase operon regulatory protein LldR or LctR or B3604 SW:LLDR_ECOLI (P33233) (258 aa) fasta scores: E(): 4.3e-12, 31.915% id in 235 aa, and to Streptomyces coelicolor  GntR-family transcriptional regulator Scc24.13C TR:Q9L0A4 (EMBL:AL163003) (235 aa) fasta scores: E(): 4.3e-14, 34.222% id in 225 aa
NP_879088.1	Similar to Rhizobium meliloti  conserved membrane-anchored protein Smb21182 TR:CAC49248 (EMBL:AL603645) (394 aa) fasta scores: E(): 2e-56, 40.769% id in 390 aa, and to Sphingomonas aromaticivorans hypothetical 41.0 kDa protein TR:O86014 (EMBL:AF079317) (388 aa) fasta scores: E(): 8.9e-55, 41.732% id in 381 aa
NP_879089.1	Similar to Pseudomonas putida and Pseudomonas sp hypothetical 34.5 kDa protein in clcB-clcD intergenic region precursor SW:YCLC_PSEPU (Q47100) (329 aa) fasta scores: E(): 1.3e-33, 36.246% id in 309 aa, and to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.8e-32, 34.663% id in 326 aa
NP_879090.1	transposase for IS481 element
NP_879091.1	transposase for IS481 element
NP_879092.1	Similar to Escherichia coli EcoVIII restriction endonuclease TR:Q46974 (EMBL:U48806) (333 aa) fasta scores: E(): 9.4e-22, 34.677% id in 248 aa, and to Haemophilus influenzae type II restriction enzyme HindIII or Hi1393 SW:T2D3_HAEIN (P43870) (300 aa) fasta scores: E(): 7.4e-20, 30.420% id in 286 aa
NP_879093.1	Similar to the C-terminal regions of Thermus thermophilus nusA/infB operon DNA TR:Q56428 (EMBL:Z48001) (275 aa) fasta scores: E(): 0.00019, 39.583% id in 96 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4718 TR:Q9HV80 (EMBL:AE004885) (158 aa) fasta scores: E(): 0.00051, 33.962% id in 106 aa
NP_879094.1	required for the synthesis of the hydromethylpyrimidine moiety of thiamine
NP_879095.1	Similar to Rhizobium meliloti  aldehyde dehydrogenase Smb20891 TR:CAC49585 (EMBL:AL603646) (477 aa) fasta scores: E(): 5.1e-123, 68.697% id in 476 aa, and to Rhizobium loti aldehyde dehydrogenase Mlr5236 TR:Q98CA3 (EMBL:AP003006) (479 aa) fasta scores: E(): 1.8e-118, 67.230% id in 473 aa. Similar to several B. pertussis CDSs including BP0360 (44.025% identity in 477 aa overlap), BP2303, BP0757, BP1976.
NP_879096.1	Similar to Rhizobium loti  oxidoreductase Mlr7440 TR:Q986B0 (EMBL:AP003011) (476 aa) fasta scores: E(): 8.5e-78, 46.970% id in 462 aa, and to Rhizobium meliloti oxidoreductase Smc00985 TR:CAC45439 (EMBL:AL591785) (496 aa) fasta scores: E(): 1.5e-76, 44.255% id in 470 aa. Also similar to BP3139, 49.785% identity in 466 aa overlap.
NP_879097.1	Similar to Rhizobium meliloti  GntR-family transcriptional regulator Sma0246 TR:AAK64788 (EMBL:AE007207) (233 aa) fasta scores: E(): 4e-20, 36.771% id in 223 aa, and to Rhizobium loti transcriptional regulator Mll8575 TR:Q982M5 (EMBL:AP003014) (247 aa) fasta scores: E(): 5.4e-19, 36.123% id in 227 aa
NP_879098.1	transposase for IS481 element
NP_879099.1	transposase for IS481 element
NP_879100.1	Similar to Staphylococcus cohnii streptogramin B lactonase VgbB TR:O87275 (EMBL:AF015628) (295 aa) fasta scores: E(): 1.4e-42, 41.637% id in 281 aa, and to Streptomyces coelicolor  hydrolase Scd6.27C TR:Q9KZX7 (EMBL:AL353815) (299 aa) fasta scores: E(): 3.6e-47, 46.875% id in 288 aa
NP_879101.1	Similar to Alcaligenes faecalis phosphinothricin N-acetyltransferase Pat SW:PAT_ALCFA (P31668) (197 aa) fasta scores: E(): 1.4e-35, 59.884% id in 172 aa, and to Caulobacter crescentus phosphinothricin N-acetyltransferase Cc0935 TR:Q9A9P1 (EMBL:AE005770) (180 aa) fasta scores: E(): 3.6e-32, 53.757% id in 173 aa
NP_879102.1	Similar to Caulobacter crescentus ExsB protein Cc3160 TR:Q9A3P2 (EMBL:AE005980) (242 aa) fasta scores: E(): 2.7e-64, 63.983% id in 236 aa, and to Rhizobium loti Mll5936 protein TR:Q98AM3 (EMBL:AP003007) (245 aa) fasta scores: E(): 8.9e-59, 60.606% id in 231 aa
NP_879103.1	catalyzes the formation of oxaloacetate from phosphoenolpyruvate
NP_879104.1	Previously sequenced as Bordetella pertussis autotransporter subtilisin-like protease SphB1 TR:CAC44081 (EMBL:AJ318229) (1039 aa) fasta scores: E(): 0, 100.000% id in 932 aa, and dimilar to Xylella fastidiosa serine protease Xf1026 TR:Q9PEK2 (EMBL:AE003939) (905 aa) fasta scores: E(): 1.1e-45, 31.919% id in 943 aa
NP_879105.1	converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA
NP_879106.1	Similar to Escherichia coli short-chain fatty acids transporter AtoE or B2223 SW:ATOE_ECOLI (P76460) (440 aa) fasta scores: E(): 1.4e-62, 39.636% id in 439 aa, and to Alcaligenes eutrophus hypothetical 47.8 kDa protein TR:Q9F189 (EMBL:AF042280) (446 aa) fasta scores: E(): 1.5e-125, 75.281% id in 445 aa. Also similar to BP0404, 44.988% identity (46.283% ungapped) in 429 aa overlap.
NP_879107.1	Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase Pa4162 TR:Q9HWL9 (EMBL:AE004832) (238 aa) fasta scores: E(): 3.1e-29, 45.887% id in 231 aa, and to Streptomyces coelicolor  short chain oxidoreductase 2 Scg61.28C TR:Q9K3Y7 (EMBL:AL359949) (253 aa) fasta scores: E(): 1.8e-20, 42.324% id in 241 aa. Similar to BP3244 (49.153% identity in 236 aa overlap) and to BP1222 (44.726% identity in 237 aa overlap
NP_879108.1	Similar to Rhodococcus opacus PcaR TR:O67983 (EMBL:AF003947) (265 aa) fasta scores: E(): 1.2e-41, 50.602% id in 249 aa, and to Rhizobium meliloti transcriptional regulator, IclR family protein Smb20586 TR:CAC49898 (EMBL:AL603647) (251 aa) fasta scores: E(): 2.2e-39, 48.780% id in 246 aa
NP_879109.1	Similar to Pseudomonas putida 3-oxoadipate CoA-transferase subunit A PcaI SW:PCAI_PSEPU (Q01103) (231 aa) fasta scores: E(): 3.6e-59, 71.689% id in 219 aa, and to Acinetobacter calcoaceticus 3-oxoadipate CoA-transferase subunit A PcaI and CatI SW:PCAI_ACICA (Q43973) (228 aa) fasta scores: E(): 7.8e-54, 65.929% id in 226 aa. Also similar to BP1788 (50.228% identity in 219 aa overlap), and to BP2401 (48.684% identity in 228 aa overlap).
NP_879110.1	Similar to Pseudomonas putida 3-oxoadipate CoA-transferase subunit B PcaJ SW:PCAJ_PSEPU (Q01104) (212 aa) fasta scores: E(): 1.9e-53, 66.190% id in 210 aa, and to Acinetobacter calcoaceticus 3-oxoadipate CoA-transferase subunit B PcaJ and CatJ SW:PCAJ_ACICA (Q59091) (218 aa) fasta scores: E(): 4.1e-50, 62.981% id in 208 aa. Also similar to BP1789 (50.472% identity in 212 aa overlap), and to BP2400 (49.268% identity in 205 aa overlap).
NP_879111.1	Similar to Alcaligenes eutrophus methylmuconolactone isomerase MmlJ TR:O51800 (EMBL:X99639) (91 aa) fasta scores: E(): 5.3e-23, 63.736% id in 91 aa, and to Acinetobacter lwoffii muconolactone delta-isomerase 2 CatC2 SW:CTC2_ACILW (O33951) (96 aa) fasta scores: E(): 1.7e-22, 63.736% id in 91 aa
NP_879112.1	unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity
NP_879113.1	Similar to Alcaligenes eutrophus 3-oxoadipate enol-lactone hydrolase CatD2 TR:Q9EV45 (EMBL:AF042280) (259 aa) fasta scores: E(): 4.2e-56, 58.915% id in 258 aa, and to Pseudomonas putida PcaD-like protein TR:Q9WWZ4 (EMBL:AF031417) (228 aa) fasta scores: E(): 1.1e-35, 45.778% id in 225 aa
NP_879114.1	Similar to Streptomyces coelicolor hypothetical 34.1 kDa protein Scif3.09C TR:CAC37528 (EMBL:AL590982) (320 aa) fasta scores: E(): 1e-08, 33.529% id in 340 aa
NP_879115.1	Similar to Escherichia coli phosphate starvation-inducible protein PsiF precursor or B0384 SW:PSIF_ECOLI (P27295) (106 aa) fasta scores: E(): 0.00082, 51.220% id in 82 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4874 TR:Q9HUT9 (EMBL:AE004901) (138 aa) fasta scores: E(): 2.9e-11, 50.562% id in 89 aa
NP_879116.1	transposase for IS481 element
NP_879117.1	Similar to Pseudomonas putida beta-D-hydroxybutyrate dehydrogenase BdhA TR:Q9AE70 (EMBL:AJ310211) (256 aa) fasta scores: E(): 1.6e-35, 45.349% id in 258 aa, and to Pseudomonas SpGM101 beta-hydroxybutyrate dehydrogenase HbdH TR:Q9KH52 (EMBL:AF271714) (255 aa) fasta scores: E(): 2.1e-35, 45.736% id in 258 aa
NP_879118.1	Similar to Acinetobacter calcoaceticus 4-carboxymuconolactone decarboxylase PcaC SW:DC4C_ACICA (P20370) (134 aa) fasta scores: E(): 1.2e-19, 43.333% id in 120 aa, and to Pseudomonas putida PcaC-like protein TR:Q9WWZ5 (EMBL:AF031417) (130 aa) fasta scores: E(): 2.7e-24, 55.556% id in 108 aa
NP_879119.1	Similar to Rhizobium loti transcriptional regulator Mll6786 TR:Q988D5 (EMBL:AP003010) (223 aa) fasta scores: E(): 8.7e-21, 40.196% id in 204 aa, and to Deinococcus radiodurans transcriptional regulator, GntR family Dr0815 TR:Q9RW54 (EMBL:AE001936) (267 aa) fasta scores: E(): 2e-17, 38.839% id in 224 aa
NP_879120.1	Similar to Rhodobacter capsulatus C4-dicarboxylate-binding periplasmic protein precursor DctP SW:DCTP_RHOCA (P37735) (333 aa) fasta scores: E(): 1.5e-08, 24.074% id in 324 aa, and to Rhizobium meliloti ABC transporter periplasmic solute-binding protein Smb20036 TR:CAC48439 (EMBL:AL603642) (338 aa) fasta scores: E(): 3.2e-09, 25.237% id in 317 aa
NP_879121.1	Similar to Pasteurella multocida hypothetical protein Pm1708 TR:Q9CKB6 (EMBL:AE006207) (634 aa) fasta scores: E(): 7e-37, 27.192% id in 673 aa, and to Haemophilus influenzae hypothetical protein Hi0147 SW:Y147_HAEIN (P44543) (633 aa) fasta scores: E(): 4.2e-36, 27.769% id in 641 aa
NP_879122.1	Similar to Variovorax paradoxus 2,4-diphenoxyacetic acid gene cluster TR:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 5.4e-37, 39.048% id in 315 aa, and to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.7e-39, 37.898% id in 314 aa
NP_879123.1	Similar to Escherichia coli 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase FolK or B0142 SW:HPPK_ECOLI (P26281) (158 aa) fasta scores: E(): 3.4e-15, 38.854% id in 157 aa, and to Pseudomonas fluorescens 7,8-dihydro-6-hydroxymethylpterin -pyrophosphokinase FolK TR:Q9ZEP9 (EMBL:AJ130846) (133 aa) fasta scores: E(): 1.1e-17, 52.101% id in 119 aa
NP_879124.1	Similar to Escherichia coli poly(A) polymerase PcnB or B0143 SW:PCNB_ECOLI (P13685) (472 aa) fasta scores: E(): 6e-64, 43.596% id in 445 aa, and to Pseudomonas aeruginosa poly(A) polymerase PcnB or Pa4727 TR:Q9HV72 (EMBL:AE004886) (467 aa) fasta scores: E(): 7.2e-77, 48.802% id in 459 aa
NP_879125.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa0335 TR:Q9I6F6 (EMBL:AE004471) (217 aa) fasta scores: E(): 1e-33, 46.575% id in 219 aa, and to Neisseria meningitidis hypothetical protein Nma1278 TR:Q9JUK0 (EMBL:AL162755) (222 aa) fasta scores: E(): 2e-31, 41.629% id in 221 aa
NP_879126.1	Similar to Neisseria meningitidis hypothetical protein Nma1279 TR:Q9JUJ9 (EMBL:AL162755) (243 aa) fasta scores: E(): 1e-19, 35.470% id in 234 aa, and to Escherichia coli hypothetical protein yfge YfgE or B2496 or Z3759 or Ecs3358 SW:YFGE_ECOLI (P76570) (248 aa) fasta scores: E(): 6.5e-15, 33.906% id in 233 aa
NP_879127.1	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
NP_879128.1	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity
NP_879129.1	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NP_879130.1	Similar to Escherichia coli Deda protein or B2317 or Z3579 or Ecs3201 SW:DEDA_ECOLI (P09548) (219 aa) fasta scores: E(): 6.7e-36, 51.485% id in 202 aa, and to Burkholderia mallei DedA TR:Q9AI54 (EMBL:AF285636) (226 aa) fasta scores: E(): 5.3e-51, 64.929% id in 211 aa
NP_879131.1	Similar to Escherichia coli N-acetylmuramoyl-L-alanine amidase AmiC precursor or B2817 SW:AMIC_ECOLI (Q46929) (417 aa) fasta scores: E(): 8.8e-41, 50.608% id in 411 aa, and to Pseudomonas aeruginosa N-acetylmuramoyl-L-alanine amidase AmiA or Pa5538 TR:Q9HT36 (EMBL:AE004966) (397 aa) fasta scores: E(): 1e-33, 41.667% id in 408 aa
NP_879132.1	Similar to Escherichia coli hypothetical protein YjeE or B4168 or Z5775 or Ecs5144 SW:YJEE_ECOLI (P31805) (153 aa) fasta scores: E(): 1.6e-19, 44.218% id in 147 aa, and to Neisseria meningitidis hypothetical protein Nmb0457 TR:Q9K0V2 (EMBL:AE002401) (153 aa) fasta scores: E(): 8.7e-18, 44.375% id in 160 aa
NP_879133.1	class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle
NP_879134.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa5466 TR:Q9HTA4 (EMBL:AE004959) (314 aa) fasta scores: E(): 1.1e-31, 43.189% id in 301 aa, and to Rhizobium meliloti hypothetical transmembrane protein Smc01358 TR:CAC45885 (EMBL:AL591786) (311 aa) fasta scores: E(): 3.2e-19, 31.922% id in 307 aa
NP_879135.1	Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.1e-49, 44.207% id in 328 aa, and to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1.3e-40, 39.752% id in 322 aa.
NP_879136.1	Similar to Escherichia coli transcriptional activator protein LysR or B2839 SW:LYSR_ECOLI (P03030) (311 aa) fasta scores: E(): 5.5e-19, 32.155% id in 283 aa, and to Rhizobium loti transcriptional regulator Mlr7023 TR:Q987J8 (EMBL:AP003010) (301 aa) fasta scores: E(): 1.7e-21, 34.237% id in 295 aa
NP_879137.1	Similar to Escherichia coli gamma-glutamyltranspeptidase precursor Ggt or B3447 SW:GGT_ECOLI (P18956) (580 aa) fasta scores: E(): 1.6e-52, 35.484% id in 589 aa, and to Vibrio cholerae gamma-glutamyltranspeptidase Vc0194 TR:Q9KVF2 (EMBL:AE004109) (588 aa) fasta scores: E(): 5e-98, 49.206% id in 567 aa
NP_879138.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3592 TR:Q9HY34 (EMBL:AE004779) (395 aa) fasta scores: E(): 1.4e-94, 68.144% id in 361 aa, and to Rhizobium meliloti  conserved membrane-anchored protein Smb21182 TR:CAC49248 (EMBL:AL603645) (394 aa) fasta scores: E(): 7.2e-57, 44.986% id in 369 aa
NP_879139.1	Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 5.2e-48, 45.122% id in 328 aa, and to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 4.8e-44, 43.750% id in 320 aa.
NP_879140.1	transposase for IS481 element
NP_879141.1	Similar to Agrobacterium tumefaciens Agr_l_1535p TR:AAK89343 (EMBL:AE008274) (214 aa) fasta scores: E(): 7.4e-40, 62.941% id in 170 aa, and to Methanococcus jannaschii hypothetical protein Mj1563 SW:YF63_METJA (Q58958) (152 aa) fasta scores: E(): 2.8e-06, 30.935% id in 139 aa
NP_879142.1	Similar to Escherichia coli cytochrome D ubiquinol oxidase subunit I CydA or Cyd-1 or B0733 SW:CYDA_ECOLI (P11026) (522 aa) fasta scores: E(): 1.8e-121, 60.980% id in 510 aa, and to Vibrio cholerae cytochrome D ubiquinol oxidase subunit I Vc1844 TR:Q9KR03 (EMBL:AE004260) (541 aa) fasta scores: E(): 1.7e-122, 60.148% id in 542 aa
NP_879143.1	Similar to Escherichia coli cytochrome D ubiquinol oxidase subunit II CydB or Cyd-2 or B0734 or Z0901 or Ecs0769 SW:CYDB_ECOLI (P11027) (379 aa) fasta scores: E(): 4.5e-71, 50.529% id in 378 aa, and to Brucella abortus cytochrome D oxidase subunit II CydB TR:Q9FDD0 (EMBL:AF284438) (384 aa) fasta scores: E(): 1.6e-78, 55.789% id in 380 aa.
NP_879144.1	Similar to Escherichia coli protein YbgT or B0734.1 SW:YBGT_ECOLI (P56100) (37 aa) fasta scores: E(): 0.00014, 56.250% id in 32 aa, and to Vibrio cholerae hypothetical protein Vc1842 TR:Q9KR05 (EMBL:AE004260) (35 aa) fasta scores: E(): 1.3e-07, 63.636% id in 33 aa
NP_879145.1	Similar to Escherichia coli transport ATP-binding protein CydD or HtrD or B0887 SW:CYDD_ECOLI (P29018) (588 aa) fasta scores: E(): 1.9e-57, 38.529% id in 571 aa, and to Shewanella sp barophilic bacterium DNA for pressure regulated cluster CydD TR:P96012 (EMBL:D88785) (601 aa) fasta scores: E(): 7.7e-53, 37.367% id in 562 aa
NP_879146.1	Similar to Escherichia coli transport ATP-binding protein CydC or MdrA or MdrH or SurB or B0886 SW:CYDC_ECOLI (P23886) (573 aa) fasta scores: E(): 5.4e-45, 34.535% id in 527 aa, and to Vibrio cholerae transport ATP-binding protein CydC or Vc1180 TR:Q9KSS6 (EMBL:AE004198) (573 aa) fasta scores: E(): 1.3e-48, 35.818% id in 550 aa
NP_879147.1	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis
NP_879148.1	no significant database matches. Similar to BP1766, BP2719, BP3099, BP3683, and BP3731
NP_879149.1	transposase for IS481 element
NP_879150.1	no significant database matches
NP_879151.1	no significant database matches
NP_879153.1	Similar to Escherichia coli stringent starvation protein B SspB or B3228 or Z4586 or Ecs4101 SW:SSPB_ECOLI (P25663) (165 aa) fasta scores: E(): 9.6e-13, 40.845% id in 142 aa, and to Neisseria meningitidis stringent starvation protein B Nmb1952 TR:Q9JXN9 (EMBL:AE002543) (130 aa) fasta scores: E(): 9.6e-19, 50.407% id in 123 aa
NP_879154.1	Similar to Escherichia coli stringent starvation protein A SspA or Ssp or Pog or B3229 SW:SSPA_ECOLI (P05838) (211 aa) fasta scores: E(): 5.4e-29, 42.857% id in 203 aa, and to Neisseria meningitidis stringent starvation protein A Nmb1953 TR:Q9JXN8 (EMBL:AE002543) (201 aa) fasta scores: E(): 1.4e-56, 70.443% id in 203 aa
NP_879155.1	Similar to Chromatium vinosum cytochrome C1 precursor PetC SW:CY1_CHRVI (O31216) (244 aa) fasta scores: E(): 2.7e-26, 41.637% id in 281 aa, and to Neisseria meningitidis ubiquinol--cytochrome C reductase, cytochrome C1 Nmb2051 TR:Q9JXH1 (EMBL:AE002555) (266 aa) fasta scores: E(): 6.6e-32, 42.908% id in 282 aa
NP_879156.1	Similar to Rhodocyclus gelatinosus cytochrome B PetB TR:AAK55422 (EMBL:AF380164) (423 aa) fasta scores: E(): 5.3e-99, 70.824% id in 449 aa, and to Neisseria meningitidis cytochrome B CytB or Petb or Nma0384 TR:Q9JWG5 (EMBL:AL162753) (449 aa) fasta scores: E(): 6.1e-92, 58.747% id in 463 aa
NP_879157.1	Similar to Chromatium vinosum ubiquinol-cytochrome C reductase iron-sulfur subunit PetA SW:UCRI_CHRVI (O31214) (207 aa) fasta scores: E(): 6.6e-34, 51.613% id in 186 aa, and to Rhodocyclus gelatinosus rieske protein PetA TR:AAK55421 (EMBL:AF380164) (198 aa) fasta scores: E(): 8.4e-50, 65.979% id in 194 aa
NP_879158.1	homopentamer; channel that opens in response to pressure or hypoosmotic shock
NP_879159.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa4445 TR:Q9HVX2 (EMBL:AE004859) (252 aa) fasta scores: E(): 8.6e-49, 53.516% id in 256 aa, and to Neisseria meningitidis hypothetical protein Nma0382 SW:Y382_NEIMA (Q9JWG6) (249 aa) fasta scores: E(): 6.7e-46, 50.996% id in 251 aa
NP_879160.1	Similar to Escherichia coli protease DegQ precursor or HhoA or B3234 SW:DEGQ_ECOLI (P39099) (455 aa) fasta scores: E(): 1.6e-38, 41.642% id in 341 aa, and to Pseudomonas aeruginosa AlgW protein or Pa4446 TR:Q9HVX1 (EMBL:AE004859) (389 aa) fasta scores: E(): 5.9e-58, 51.862% id in 376 aa
NP_879161.1	transposase for IS481 element
NP_879162.1	Similar to Bacillus subtilis protease synthase and sporulation negative regulatory protein Pai2 PaiB SW:PAIB_BACSU (P21341) (207 aa) fasta scores: E(): 3.2e-17, 30.476% id in 210 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4182 TR:Q9HWJ9 (EMBL:AE004834) (212 aa) fasta scores: E(): 3.6e-27, 41.237% id in 194 aa
NP_879163.1	Similar to Escherichia coli  2-hydroxyacid dehydrogenase in phoH-csgG intergenic region YcdW or B1033 SW:YCDW_ECOLI (P75913) (325 aa) fasta scores: E(): 2.7e-30, 36.364% id in 297 aa, and to Rhizobium loti probable dehydrogenase Mll7048 TR:Q987H7 (EMBL:AP003010) (307 aa) fasta scores: E(): 1.1e-35, 42.391% id in 276 aa
NP_879164.1	Similar to Rhizobium meliloti probable extracellular solute-binding protein, family 5 Sma2075 TR:AAK65791 (EMBL:AE007299) (543 aa) fasta scores: E(): 2e-63, 36.364% id in 539 aa, and to Rhizobium loti ABC transporter oligopeptide-binding protein Mlr3395 TR:Q98GC1 (EMBL:AP003001) (536 aa) fasta scores: E(): 8e-52, 33.594% id in 512 aa. Also similar to BP2293, 59.693% identity in 521 aa overlap.
NP_879165.1	Similar to Escherichia coli acetyl esterase Aes or B0476 SW:AES_ECOLI (P23872) (319 aa) fasta scores: E(): 2.7e-29, 35.032% id in 314 aa, and to Streptomyces coelicolor  lipase Sc4b10.32 TR:Q9FC55 (EMBL:AL391515) (316 aa) fasta scores: E(): 2.6e-28, 36.760% id in 321 aa
NP_879166.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa0791 TR:Q9I5E7 (EMBL:AE004514) (262 aa) fasta scores: E(): 1.2e-37, 44.898% id in 245 aa, and to Rhizobium loti probable transcriptional regulator Mll2686 TR:Q98HW2 (EMBL:AP003000) (292 aa) fasta scores: E(): 2.3e-36, 43.902% id in 246 aa. Also similar to BP0288 (40.840% identity in 262 aa overlap), and to BP3550 (41.121% identity in 214 aa overlap)
NP_879167.1	Similar to Corynebacterium glutamicum 2-isopropylmalate synthase LeuA SW:LEU1_CORGL (P42455) (616 aa) fasta scores: E(): 8.9e-69, 55.077% id in 325 aa, and to Mycobacterium tuberculosis 2-isopropylmalate synthase LeuA or Rv3710 or Mt3813 or Mtv025.058 SW:LEU1_MYCTU (P96420) (644 aa) fasta scores: E(): 3.1e-73, 58.154% id in 325 aa. Also similar to N-terminal region of BP0131, 68.598% identity (68.598% ungapped) in 328 aa overlap.
NP_879168.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa1235 TR:Q9I4A3 (EMBL:AE004553) (260 aa) fasta scores: E(): 1.1e-46, 52.697% id in 241 aa, and to Rhizobium loti probable transcriptional regulator Mll2686 TR:Q98HW2 (EMBL:AP003000) (292 aa) fasta scores: E(): 3.4e-35, 40.927% id in 259 aa
NP_879169.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
NP_879170.1	Similar to Rhizobium loti transmembrane efflux protein Mlr4084 TR:Q98EU2 (EMBL:AP003003) (397 aa) fasta scores: E(): 8.6e-82, 64.987% id in 397 aa, and to Streptomyces coelicolor  transmembrane efflux protein Sch24.37 TR:Q9X8V1 (EMBL:AL049826) (404 aa) fasta scores: E(): 2e-71, 56.566% id in 396 aa. Also similar to BP0940 (36.896% identity in 393 aa overlap), and to BP1608 (48.947% identity in 380 aa overlap)
NP_879171.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa1859 TR:Q9I2N6 (EMBL:AE004612) (295 aa) fasta scores: E(): 7e-66, 59.386% id in 293 aa, and to Neisseria meningitidis  LysR-family transcriptional regulator Nma0601 TR:Q9JW03 (EMBL:AL162753) (299 aa) fasta scores: E(): 7.2e-46, 45.392% id in 293 aa. Also similar to BP1607, 58.703% identity (58.703% ungapped) in 293 aa overlap.
NP_879172.1	Similar to Homo sapiens mitochondrial 5' Dnt-2 TR:Q9NPB1 (EMBL:AJ277557) (228 aa) fasta scores: E(): 4.3e-26, 44.865% id in 185 aa, and to Mus musculus 5' Dnt or Nt TR:Q9JM14 (EMBL:AF078840) (200 aa) fasta scores: E(): 5.1e-26, 42.162% id in 185 aa, and to Staphylococcus aureus subspaureus Mu50. conserved hypothetical protein sav0725 TR:BAB56887 (EMBL:AP003360) (180 aa) fasta scores: E(): 1.4e-05, 29.609% id in 179 aa
NP_879173.1	transposase for IS481 element
NP_879175.1	transposase for IS481 element
NP_879176.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa2789 TR:Q9I054 (EMBL:AE004706) (359 aa) fasta scores: E(): 6.5e-06, 33.134% id in 335 aa, and to Agrobacterium tumefaciens Agr_l_258p TR:AAK88699 (EMBL:AE008210) (357 aa) fasta scores: E(): 0.042, 26.897% id in 290 aa
NP_879177.1	Similar to Rhodopseudomonas palustris transcriptional activatory protein BadR SW:BADR_RHOPA (O07458) (175 aa) fasta scores: E(): 7.3e-06, 28.873% id in 142 aa, and to Rhizobium loti transcriptional regulator Mll5432 TR:Q98BT7 (EMBL:AP003006) (156 aa) fasta scores: E(): 6.6e-22, 48.905% id in 137 aa
NP_879178.1	Similar to Pseudomonas paucimobilis esterase TR:Q9APE2 (EMBL:AF305841) (284 aa) fasta scores: E(): 4.4e-12, 28.058% id in 278 aa, and to Pseudomonas spCA10. hypothetical 31.6 kDa protein TR:Q9AQQ0 (EMBL:AB047272) (289 aa) fasta scores: E(): 2.2e-63, 58.845% id in 277 aa
NP_879179.1	Similar to Rhodopseudomonas palustris  ABC transporter substrate-binding protein HbaE TR:O07470 (EMBL:U75364) (392 aa) fasta scores: E(): 4.5e-32, 32.741% id in 394 aa, and to Pseudomonas spCA10.  ABC transporter subunit TR:Q9AQP4 (EMBL:AB047548) (386 aa) fasta scores: E(): 1.7e-50, 41.237% id in 388 aa
NP_879180.1	Similar to Rhodopseudomonas palustris  ABC transporter subunit HbaF TR:O07469 (EMBL:U75364) (286 aa) fasta scores: E(): 1.9e-34, 45.333% id in 300 aa, and to Rhizobium meliloti  permease ABC transporter protein smc03118 TR:CAC47554 (EMBL:AL591792) (295 aa) fasta scores: E(): 1.9e-22, 35.593% id in 295 aa
NP_879181.1	Similar to Rhizobium meliloti  permease ABC transporter protein Smc03117 TR:CAC47555 (EMBL:AL591792) (330 aa) fasta scores: E(): 4.2e-27, 39.000% id in 300 aa, and to Agrobacterium tumefaciens Agr_l_1453p TR:AAK89305 (EMBL:AE008271) (335 aa) fasta scores: E(): 4.9e-28, 38.658% id in 313 aa
NP_879182.1	Similar to Streptomyces coelicolor  branched-chain amino acid transport ATP-binding protein Scf42.19C TR:Q9L2J9 (EMBL:AL137165) (266 aa) fasta scores: E(): 9.1e-30, 43.243% id in 259 aa, and to Rhizobium meliloti branched-chain amino acid uptake ABC transporter ATP-binding protein Smb20785 TR:CAC49877 (EMBL:AL603647) (254 aa) fasta scores: E(): 1.8e-26, 41.057% id in 246 aa
NP_879183.1	Similar to Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivF or B3454 SW:LIVF_ECOLI (P22731) (237 aa) fasta scores: E(): 7.5e-27, 44.915% id in 236 aa, and to Alcaligenes eutrophus TR:P95538 (EMBL:D64144) (240 aa) fasta scores: E(): 7e-54, 67.521% id in 234 aa
NP_879184.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_879185.1	Similar to Azoarcus evansii  acyl-CoA dehydrogenase TR:AAL02066 (EMBL:AF320253) (404 aa) fasta scores: E(): 2.7e-99, 71.318% id in 387 aa, and to Thauera aromatica acyl-CoA dehydrogenase TR:Q9AJS9 (EMBL:AJ278289) (388 aa) fasta scores: E(): 3e-95, 67.700% id in 387 aa
NP_879186.1	Similar to Rhodopseudomonas palustris benzoate-coenzyme A ligase BadA TR:Q59760 (EMBL:L42322) (521 aa) fasta scores: E(): 1.1e-49, 34.990% id in 523 aa, and to Azoarcus evansii 2-aminobenzoate-CoA ligase TR:AAL02069 (EMBL:AF320253) (542 aa) fasta scores: E(): 5.2e-121, 58.165% id in 545 aa
NP_879187.1	Similar to Pseudomonas SpdJ-12. 4-hydroxybenzoyl-CoA thioesterase FcbC TR:Q9RBQ8 (EMBL:AF051771) (142 aa) fasta scores: E(): 7.8e-07, 33.333% id in 132 aa, and to Bacillus halodurans 4-hydroxybenzoyl-CoA thioesterase Bh1999 TR:Q9KBC9 (EMBL:AP001514) (138 aa) fasta scores: E(): 3.8e-05, 26.772% id in 127 aa
NP_879188.1	Similar to Azoarcus evansii hypothetical 14.6 kDa protein TR:AAL02075 (EMBL:AF320254) (132 aa) fasta scores: E(): 3e-28, 55.303% id in 132 aa, and to Rhizobium loti Mll5429 protein TR:Q98BU0 (EMBL:AP003006) (137 aa) fasta scores: E(): 3.2e-31, 62.879% id in 132 aa
NP_879189.1	Similar to Vibrio cholerae hypothetical protein Vca1085 TR:Q9KKL8 (EMBL:AE004434) (556 aa) fasta scores: E(): 3.5e-23, 27.632% id in 456 aa, and to Thermotoga maritima conserved hypothetical protein Tm0735 TR:Q9WZJ4 (EMBL:AE001744) (455 aa) fasta scores: E(): 2.1e-13, 30.947% id in 475 aa
NP_879190.1	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway
NP_879191.1	Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate
NP_879192.1	Similar to Escherichia coli phosphomethylpyrimidine kinase ThiD or B2103 SW:THID_ECOLI (P76422) (266 aa) fasta scores: E(): 0.0004, 24.255% id in 235 aa, and to Pseudomonas aeruginosa phosphomethylpyrimidine kinase ThiD or Pa3975 TR:Q9HX41 (EMBL:AE004815) (265 aa) fasta scores: E(): 3.6e-12, 31.298% id in 262 aa
NP_879193.1	Similar to Acinetobacter calcoaceticus rubredoxin RubA SW:RUBR_ACICA (P42453) (54 aa) fasta scores: E(): 1.2e-15, 55.556% id in 54 aa, and to Pseudomonas aeruginosa rubredoxin Pa5350 TR:Q9HTK8 (EMBL:AE004947) (55 aa) fasta scores: E(): 6.2e-16, 62.963% id in 54 aa
NP_879194.1	Similar to Pseudomonas aeruginosa AlgH or Pa0405 TR:Q9RQ16 (EMBL:AF137022) (189 aa) fasta scores: E(): 2.9e-31, 49.730% id in 185 aa, and to Neisseria meningitidis hypothetical protein Nma1550 TR:Q9JU12 (EMBL:AL162756) (182 aa) fasta scores: E(): 7.6e-30, 43.407% id in 182 aa
NP_879195.1	similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function
NP_879196.1	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis
NP_879197.1	Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides
NP_879198.1	Similar to Neisseria gonorrhoeae 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC SW:PLSC_NEIGO (Q59601) (255 aa) fasta scores: E(): 5.3e-21, 33.862% id in 189 aa, and to Burkholderia pseudomallei  1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC TR:O69114 (EMBL:AF064070) (289 aa) fasta scores: E(): 6.4e-25, 34.694% id in 245 aa
NP_879199.1	hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP
NP_879200.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3827 TR:Q9HXH5 (EMBL:AE004800) (355 aa) fasta scores: E(): 3e-11, 28.212% id in 358 aa, and to Vibrio cholerae hypothetical protein Vc2499 TR:Q9KP76 (EMBL:AE004319) (356 aa) fasta scores: E(): 9.1e-10, 25.956% id in 366 aa
NP_879201.1	glycosyltransferase; polymerizes glycan strands in the peptidoglycan
NP_879202.1	transposase for IS481 element
NP_879203.1	Similar to Bacillus halodurans Bh0200 protein TR:Q9KGB0 (EMBL:AP001507) (107 aa) fasta scores: E(): 3.3, 30.108% id in 93 aa, and to the N-terminal region of Vibrio cholerae UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase Vc0918 TR:Q9KTI4 (EMBL:AE004175) (413 aa) fasta scores: E(): 8.2, 26.126% id in 111 aa. Also similar to BP0934, 48.598% identity (48.598% ungapped) in 107 aa overlap.
NP_879204.1	Similar to Pseudomonas diterpeniphila coenzyme A ligase TdtL TR:AAK95584 (EMBL:AF274704) (543 aa) fasta scores: E(): 3.2e-55, 36.813% id in 546 aa, and to Streptomyces griseus subspgriseus NonL TR:O85737 (EMBL:AF074603) (555 aa) fasta scores: E(): 4.4e-53, 35.754% id in 537 aa. Also similar to BP0930, 60.517% identity (61.308% ungapped) in 542 aa overlap.
NP_879205.1	Similar to Pseudomonas chlororaphis hypothetical 35.8 kDa protein TR:Q9L3W5 (EMBL:AJ271325) (336 aa) fasta scores: E(): 4e-24, 30.380% id in 316 aa, and to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.3e-23, 31.288% id in 326 aa
NP_879206.1	Similar to Methanococcus jannaschii hypothetical protein Mj1552 TR:Q58947 (EMBL:U67596) (141 aa) fasta scores: E(): 4.3e-07, 36.842% id in 95 aa, and to Archaeoglobus fulgidus conserved hypothetical protein TR:O29957 (EMBL:AE001085) (165 aa) fasta scores: E(): 2.2e-06, 25.424% id in 118 aa. Also similar to BP0932, 50.400% identity (50.806% ungapped) in 125 aa overlap.
NP_879207.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
NP_879208.1	Similar to Alteromonas carrageenovora arylsulfatase precursor AtsA or Ats SW:ARS_ALTCA (P28607) (328 aa) fasta scores: E(): 8.2e-09, 27.541% id in 305 aa, and to Caulobacter crescentus metallo-beta-lactamase family protein Cc1176 TR:Q9A918 (EMBL:AE005795) (317 aa) fasta scores: E(): 6.4e-13, 29.097% id in 299 aa
NP_879209.1	Similar to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1.3e-37, 41.176% id in 323 aa, and to Pseudomonas putida hypothetical 34.5 kDa protein in clcB-clcD intergenic region precursor SW:YCLC_PSEPU (Q47100) (329 aa) fasta scores: E(): 8.8e-35, 38.816% id in 304 aa
NP_879210.1	Similar to Rhizobium meliloti hypothetical 34.3 kDa protein Sma0689 TR:AAK65023 (EMBL:AE007228) (316 aa) fasta scores: E(): 4.7e-14, 32.971% id in 276 aa
NP_879211.1	no significant database matches
NP_879212.1	Similar to Escherichia coli methylated-DNA--protein-cysteine methyltransferase Ogt or B1335 SW:OGT_ECOLI (P09168) (171 aa) fasta scores: E(): 1e-25, 42.857% id in 168 aa, and to Caulobacter crescentus methylated-DNA--protein-cysteine methyltransferase Cc0689 TR:Q9AAB5 (EMBL:AE005744) (220 aa) fasta scores: E(): 2.5e-30, 53.254% id in 169 aa
NP_879213.1	Similar to Escherichia coli alkylated DNA repair protein AlkB or AidD or B2212 SW:ALKB_ECOLI (P05050) (216 aa) fasta scores: E(): 9.4e-44, 56.808% id in 213 aa, and to Brucella melitensis AlkB TR:Q9LA70 (EMBL:AF148683) (212 aa) fasta scores: E(): 9.9e-47, 58.294% id in 211 aa
NP_879214.1	Similar to Rhizobium loti Mlr1862 protein TR:Q98JN4 (EMBL:AP002998) (247 aa) fasta scores: E(): 2.1e-59, 61.039% id in 231 aa, and to Caulobacter crescentus hypothetical protein Cc0708 TR:Q9AA98 (EMBL:AE005746) (234 aa) fasta scores: E(): 7.4e-54, 57.778% id in 225 aa
NP_879215.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa0312 TR:Q9I6H9 (EMBL:AE004469) (164 aa) fasta scores: E(): 5.4e-27, 58.182% id in 165 aa, and to Rhizobium loti Mll0105 protein TR:Q98NK1 (EMBL:AP002994) (167 aa) fasta scores: E(): 1.1e-26, 59.236% id in 157 aa
NP_879216.1	with HmuTU is involved in the transport of hemin
NP_879217.1	Similar to Yersinia enterocolitica hemin permease HemU TR:P74980 (EMBL:X77867) (334 aa) fasta scores: E(): 4.8e-47, 50.000% id in 286 aa, and to Yersinia pestis hemin transport system permease HmuU SW:HMUU_YERPE (Q56992) (334 aa) fasta scores: E(): 7.3e-47, 49.141% id in 291 aa. Also similar to BP3340, 40.256% identity (42.568% ungapped) in 313 aa overlap.
NP_879218.1	Similar to Yersinia enterocolitica hemin binding protein HemT TR:P74979 (EMBL:X77867) (279 aa) fasta scores: E(): 8.2e-29, 37.638% id in 271 aa, and to Yersinia pestis hemin-binding periplasmic protein HmuT precursor SW:HMUT_YERPE (Q56991) (279 aa) fasta scores: E(): 9.4e-29, 37.638% id in 271 aa
NP_879219.1	Similar to Yersinia pestis hemin transport protein HmuS SW:HMUS_YERPE (Q56990) (345 aa) fasta scores: E(): 1.1e-46, 42.486% id in 346 aa, and to Yersinia enterocolitica hemin transport protein HemS SW:HEMS_YEREN (P31517) (345 aa) fasta scores: E(): 1.2e-46, 43.413% id in 334 aa
NP_879220.1	Previously sequenced as Bordetella pertussis outer membrane heme receptor BhuR TR:AAK38153 (EMBL:AY032627) (149 aa) fasta scores: E(): 2.7e-49, 100.000% id in 149 aa. Similar to Rhizobium meliloti  iron transport protein Smc02726 TR:CAC46967 (EMBL:AL591790) (743 aa) fasta scores: E(): 4.6e-37, 37.630% id in 768 aa
NP_879221.1	Similar to Escherichia coli protein FecR or B4292 SW:FECR_ECOLI (P23485) (317 aa) fasta scores: E(): 1e-22, 32.459% id in 305 aa, and to Pseudomonas aeruginosa probable transmembrane sensor Pa1911 TR:Q9I2J3 (EMBL:AE004617) (316 aa) fasta scores: E(): 2.4e-32, 41.118% id in 304 aa
NP_879222.1	Similar to Escherichia coli probable RNA polymerase sigma factor FecI or B4293 SW:FECI_ECOLI (P23484) (173 aa) fasta scores: E(): 1.2e-26, 50.649% id in 154 aa, and to Pseudomonas aeruginosa  RNA polymerase sigma factor Pa1912 TR:Q9I2J2 (EMBL:AE004617) (168 aa) fasta scores: E(): 8.9e-31, 55.689% id in 167 aa. Also similar to BP1136, 46.875% identity in 160 aa overlap
NP_879223.1	no significant database matches
NP_879224.1	Similar to Synechocystis sp ferredoxin PetF or Sll1382 TR:P74159 (EMBL:D90912) (122 aa) fasta scores: E(): 0.074, 28.125% id in 96 aa, and to Anabaena variabilis  TR:AAL05047 (EMBL:AF410434) (99 aa) fasta scores: E(): 0.015, 30.526% id in 95 aa
NP_879225.1	no significant database matches
NP_879226.1	Similar to Ralstonia spKN1 ferredoxin-like protein PhyF TR:Q9RAF3 (EMBL:AB031996) (115 aa) fasta scores: E(): 0.00015, 36.957% id in 92 aa, and to Pseudomonas putida ferredoxin, plant-type NahT SW:FERN_PSEPU (P23263) (108 aa) fasta scores: E(): 0.00022, 30.303% id in 99 aa
NP_879227.1	Similar to Halobacterium sp ornithine cyclodeaminase Ocd2 or Vng1364G TR:Q9HQ24 (EMBL:AE005056) (328 aa) fasta scores: E(): 3.7e-18, 31.494% id in 308 aa, and to Rhizobium loti ornithine cyclodeaminase Ocd2 or Mlr3204 TR:Q98GR8 (EMBL:AP003001) (321 aa) fasta scores: E(): 5.4e-16, 33.127% id in 323 aa
NP_879228.1	transposase for IS481 element
NP_879229.1	Similar to Rhizobium leguminosarum transcription activator MatR TR:Q9JP74 (EMBL:AF117694) (222 aa) fasta scores: E(): 9.1e-15, 37.824% id in 193 aa, and to Streptomyces coelicolor  transcriptional regulator Sc4b5.15 TR:Q9ZBV3 (EMBL:AL034443) (225 aa) fasta scores: E(): 1.1e-17, 33.028% id in 218 aa. Also similar to BP2975, 56.034% identity (56.522% ungapped) in 232 aa overlap.
NP_879230.1	Similar to Rhizobium meliloti hypothetical protein Sma1368 TR:AAK65408 (EMBL:AE007262) (241 aa) fasta scores: E(): 1e-21, 36.325% id in 234 aa, and to Vibrio cholerae hypothetical protein Vca1052 TR:Q9KKQ0 (EMBL:AE004431) (240 aa) fasta scores: E(): 2.8e-14, 28.507% id in 221 aa
NP_879231.1	Similar to Bacillus halodurans Bh2161 protein TR:Q9KAX5 (EMBL:AP001514) (477 aa) fasta scores: E(): 2.9e-34, 46.573% id in 496 aa, and to Bacillus subtilis hypothetical 48.8 kDa protein YhfA TR:O07599 (EMBL:Y14083) (463 aa) fasta scores: E(): 2.6e-16, 32.520% id in 492 aa. Also similar to BP2974, 65.139% identity (65.663% ungapped) in 502 aa overlap.
NP_879232.1	Similar to Chlamydia muridarum  coenzyme pqq synthesis protein C Tc0900 TR:Q9PJC9 (EMBL:AE002356) (236 aa) fasta scores: E(): 2.5e-11, 28.729% id in 181 aa, and to Pseudomonas aeruginosa pyrroloquinoline quinone biosynthesis protein C Pqqc or Pa1987 TR:Q9I2C2 (EMBL:AE004625) (250 aa) fasta scores: E(): 2e-06, 28.638% id in 213 aa
NP_879233.1	Similar to Bacillus stearothermophilus aldehyde dehydrogenase, thermostable AldhT SW:DHAL_BACST (P42329) (488 aa) fasta scores: E(): 1.1e-77, 46.008% id in 476 aa, and to Bacillus subtilis probable aldehyde dehydrogenase YcbD SW:DHA1_BACSU (P42236) (488 aa) fasta scores: E(): 7.9e-77, 45.702% id in 477 aa
NP_879234.1	Similar to Citrobacter freundii hypothetical 15.0 kDa protein in dhaT-dhaS intergenic region SW:YDHY_CITFR (P45517) (142 aa) fasta scores: E(): 4.1e-11, 33.803% id in 142 aa, and to Clostridium pasteurianum hypothetical 15.1 kDa protein TR:O30453 (EMBL:AF006034) (143 aa) fasta scores: E(): 5.6e-11, 36.957% id in 138 aa
NP_879235.1	Similar to Yersinia pseudotuberculosis CDP-6-deoxy-delta-3,4-glucoseen reductase AscD or RfbI SW:ASCD_YERPS (P37911) (328 aa) fasta scores: E(): 1.2e-35, 33.846% id in 325 aa, and to Yersinia pestis CDP-6-deoxy-delta-3,4-glucoseen reductase DdhD TR:CAB63270 (EMBL:AJ251713) (329 aa) fasta scores: E(): 4.9e-36, 33.739% id in 329 aa. Also similar to BP1817, 40.000% identity in 350 aa overlap
NP_879236.1	Similar to Rhizobium loti probable binding protein component of amino acid ABC transporter Mlr2201 TR:Q98IX6 (EMBL:AP002999) (262 aa) fasta scores: E(): 0.0001, 29.104% id in 134 aa, and to Synechocystis sp hypothetical 30.6 kDa protein Sll0174 TR:Q55556 (EMBL:D63999) (284 aa) fasta scores: E(): 4.9e-29, 41.304% id in 230 aa
NP_879237.1	Similar to Rhizobium meliloti conserved hypothetical protein Smb20179 TR:CAC48579 (EMBL:AL603642) (324 aa) fasta scores: E(): 1.3e-14, 24.615% id in 325 aa, and to Rhizobium loti Mlr3473 protein TR:Q98G63 (EMBL:AP003002) (390 aa) fasta scores: E(): 6.7e-12, 30.864% id in 324 aa
NP_879238.1	transposase for IS481 element
NP_879239.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa1037 TR:Q9I4T7 (EMBL:AE004536) (206 aa) fasta scores: E(): 1.7e-45, 60.294% id in 204 aa, and to Vibrio cholerae hypothetical protein Vc2115 TR:Q9KQ86 (EMBL:AE004285) (207 aa) fasta scores: E(): 3.4e-37, 51.515% id in 198 aa
NP_879240.1	converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer
NP_879241.1	Similar to Neisseria meningitidis  nuclease Nma0348 or Nmb2082 TR:Q9JR99 (EMBL:AL162752) (259 aa) fasta scores: E(): 5e-63, 56.705% id in 261 aa, and to Streptomyces coelicolor  exodeoxyribonuclease Sce87.25C TR:Q9RKB3 (EMBL:AL132674) (274 aa) fasta scores: E(): 2.3e-48, 47.388% id in 268 aa
NP_879242.1	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
NP_879243.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
NP_879244.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
NP_879245.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain
NP_879246.1	functions in MreBCD complex in some organisms
NP_879247.1	in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall
NP_879248.1	Similar to Escherichia coli rod shape-determining protein MreD or B3249 or Z4607 or Ecs4121 SW:MRED_ECOLI (P16927) (162 aa) fasta scores: E(): 1.5e-06, 33.333% id in 117 aa, and to Pseudomonas aeruginosa rod shape-determining protein MreD or Pa4479 TR:Q9HVU2 (EMBL:AE004862) (164 aa) fasta scores: E(): 1.5e-09, 31.507% id in 146 aa
NP_879249.1	Similar to Escherichia coli penicillin-binding protein 2 MrdA or PbpA or B0635 or Z0781 or Ecs0673 SW:PBP2_ECOLI (P08150) (633 aa) fasta scores: E(): 9.7e-85, 40.065% id in 614 aa, and to Pseudomonas aeruginosa penicillin-binding protein 2 PbpA or Pb or Pa4003 TR:Q9X6V3 (EMBL:AF147448) (646 aa) fasta scores: E(): 3.3e-93, 43.472% id in 651 aa
NP_879250.1	Similar to Escherichia coli rod shape-determining protein MrdB or RodA or B0634 or Z0780 or Ecs0672 SW:RODA_ECOLI (P15035) (370 aa) fasta scores: E(): 5.6e-36, 45.278% id in 360 aa, and to Vibrio cholerae rod shape-determining protein RodA or Vc0949 TR:Q9KTF3 (EMBL:AE004177) (373 aa) fasta scores: E(): 1.3e-35, 48.753% id in 361 aa
NP_879251.1	Similar to Alcaligenes eutrophus L-lactate dehydrogenase Ldh SW:LDH_ALCEU (Q07251) (349 aa) fasta scores: E(): 1.4e-89, 66.097% id in 351 aa, and to Escherichia coli hypothetical 38.9 kDa protein in dinG-glnQ intergenic region YbiC or B0801 SW:YBIC_ECOLI (P30178) (361 aa) fasta scores: E(): 5.4e-36, 35.277% id in 343 aa
NP_879252.1	Similar to Escherichia coli  tartrate carrier YgjE or B3063 SW:TTDT_ECOLI (P39414) (487 aa) fasta scores: E(): 1.6e-25, 26.141% id in 482 aa, and to Alcaligenes eutrophus membrane protein SW:MEMP_ALCEU (Q07252) (513 aa) fasta scores: E(): 1.6e-127, 72.525% id in 495 aa
NP_879253.1	FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly
NP_879254.1	Similar to Neisseria meningitidis hydrolase, Nmb0040 TR:Q9K1P1 (EMBL:AE002362) (237 aa) fasta scores: E(): 1e-20, 37.674% id in 215 aa, and to Rhizobium meliloti conserved hypothetical protein Smc01730 TR:CAC41872 (EMBL:AL591783) (258 aa) fasta scores: E(): 4.3e-20, 36.058% id in 208 aa
NP_879255.1	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate
NP_879256.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3931 TR:Q9HX85 (EMBL:AE004811) (259 aa) fasta scores: E(): 3.5e-62, 68.775% id in 253 aa, and to Xylella fastidiosa outer membrane protein Xf0873 TR:Q9PF05 (EMBL:AE003927) (261 aa) fasta scores: E(): 1.8e-53, 57.812% id in 256 aa. Also similar to BP2818, 53.585% identity in 265 aa overlap.
NP_879257.1	Similar to Treponema pallidum thioredoxin TptrX TR:Q9R788 (EMBL:U95250) (185 aa) fasta scores: E(): 1.5e-08, 32.143% id in 140 aa, and to Neisseria meningitidis thioredoxin,  Nmb1958 TR:Q9JXN4 (EMBL:AE002544) (166 aa) fasta scores: E(): 8e-16, 34.375% id in 160 aa
NP_879258.1	Similar to Haemophilus influenzae hypothetical protein Hi1658 precursor SW:YRAP_HAEIN (P45301) (193 aa) fasta scores: E(): 8.2e-20, 39.037% id in 187 aa, and to Pasteurella multocida hypothetical protein Pm0649 TR:Q9CN01 (EMBL:AE006101) (194 aa) fasta scores: E(): 5.4e-16, 36.464% id in 181 aa
NP_879259.1	catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate
NP_879260.1	Similar to Rhizobium meliloti conserved hypothetical protein Smc00416 TR:CAC41773 (EMBL:AL591783) (309 aa) fasta scores: E(): 5.7e-38, 49.286% id in 280 aa, and to Neisseria meningitidis hypothetical protein Nma0342 TR:Q9JWJ7 (EMBL:AL162752) (291 aa) fasta scores: E(): 1.4e-37, 46.290% id in 283 aa
NP_879261.1	Similar to Escherichia coli methylated-DNA--protein-cysteine methyltransferase Ogt or B1335 SW:OGT_ECOLI (P09168) (171 aa) fasta scores: E(): 8.1e-17, 48.598% id in 107 aa, and to Mycobacterium leprae methylated-DNA--protein-cysteine methyltransferase Ogt or Ml1151 SW:OGT_MYCLE (P52982) (165 aa) fasta scores: E(): 1.4e-24, 45.342% id in 161 aa
NP_879262.1	transposase for IS481 element
NP_879263.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa2306 TR:Q9I1G9 (EMBL:AE004657) (205 aa) fasta scores: E(): 2.9e-42, 57.436% id in 195 aa, and to Rhizobium meliloti hypothetical transmembrane protein Smc01425 TR:CAC46687 (EMBL:AL591789) (197 aa) fasta scores: E(): 2.5e-40, 55.959% id in 193 aa
NP_879264.1	Similar to Mycobacterium tuberculosis hypothetical 29.7 kDa protein Rv2307c or Mt2364 or Mtcy339.02 SW:YN07_MYCTU (Q50658) (281 aa) fasta scores: E(): 7.3e-16, 32.491% id in 277 aa, and to Escherichia coli from bases 2662068 to 2677236 Bem46 or B2534 TR:P77538 (EMBL:AE000340) (293 aa) fasta scores: E(): 9.3e-15, 28.279% id in 244 aa
NP_879265.1	Similar to Rhizobium meliloti hypothetical protein Sma1780 TR:AAK65640 (EMBL:AE007284) (147 aa) fasta scores: E(): 5.4e-17, 39.855% id in 138 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2880 TR:Q9HZW7 (EMBL:AE004714) (171 aa) fasta scores: E(): 1.1e-27, 51.064% id in 141 aa
NP_879266.1	Similar to Escherichia coli hypothetical 27.8 kDa protein in celF-katE intergenic region YdjC or B1733 SW:YDJC_ECOLI (P37794) (249 aa) fasta scores: E(): 0.00011, 25.993% id in 277 aa, and to Rhizobium loti Mll3087 protein TR:Q98H07 (EMBL:AP003001) (272 aa) fasta scores: E(): 2.7e-11, 34.420% id in 276 aa
NP_879267.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3556 TR:Q9HY61 (EMBL:AE004776) (549 aa) fasta scores: E(): 4.1e-31, 30.059% id in 509 aa, and to Salmonella typhimurium hypothetical 61.8 kDa protein in pmrG-pmrD intergenic region TR:O52327 (EMBL:AF036677) (548 aa) fasta scores: E(): 3.1e-26, 31.445% id in 353 aa
NP_879268.1	Similar to Shigella flexneri GtrbI TR:Q9RPZ6 (EMBL:AF139596) (306 aa) fasta scores: E(): 1.2e-41, 40.000% id in 305 aa, and to Synechocystis sp  glycosyl transferase Sll0501 sll0501 SW:Y501_SYNY3 (Q55487) (318 aa) fasta scores: E(): 3.7e-50, 44.118% id in 306 aa
NP_879269.1	Similar to Escherichia coli sodium/glutamate symport carrier protein GltS or GltC or B3653 SW:GLTS_ECOLI (P19933) (401 aa) fasta scores: E(): 1.3e-51, 40.786% id in 407 aa, and to Helicobacter pylori glutamate permease Hp1506 TR:O26036 (EMBL:AE000648) (408 aa) fasta scores: E(): 3.1e-54, 42.928% id in 403 aa
NP_879270.1	no significant database matches
NP_879271.1	Similar to Escherichia coli short-chain fatty acids transporter AtoE or B2223 SW:ATOE_ECOLI (P76460) (440 aa) fasta scores: E(): 2.5e-76, 47.018% id in 436 aa, and to Bacillus halodurans short-chain fatty acids transporter AtoE or bh0358 TR:Q9KFW3 (EMBL:AP001508) (441 aa) fasta scores: E(): 2.8e-96, 57.437% id in 437 aa. Also similar to BP0218, 44.988% identity (46.283% ungapped) in 429 aa overlap
NP_879272.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa2501 TR:Q9I0Y1 (EMBL:AE004677) (55 aa) fasta scores: E(): 0.93, 40.476% id in 42 aa
NP_879273.1	3'-5' exonuclease of DNA polymerase III
NP_879274.1	transposase for IS481 element
NP_879275.1	Similar to Bacillus subtilis hypothetical 15.9 kDa protein in bglH-wapA intergenic region precursor YxiE or N17E SW:YXIE_BACSU (P42297) (148 aa) fasta scores: E(): 6.3e-09, 33.775% id in 151 aa, and to Agrobacterium tumefaciens Agr_c_878p TR:AAK86309 (EMBL:AE007985) (160 aa) fasta scores: E(): 2.6e-13, 41.216% id in 148 aa
NP_879276.1	Similar to Caulobacter crescentus hypothetical protein Cc0924 TR:Q9A9Q0 (EMBL:AE005769) (135 aa) fasta scores: E(): 1.6e-09, 42.991% id in 107 aa, and to Rhizobium loti Mll8311 protein TR:Q983I8 (EMBL:AP003013) (112 aa) fasta scores: E(): 1e-13, 44.860% id in 107 aa
NP_879277.1	Similar to Rhizobium meliloti  transcriptional regulator protein Smb20039 TR:CAC48442 (EMBL:AL603642) (474 aa) fasta scores: E(): 3.8e-58, 40.517% id in 464 aa, and to Pseudomonas aeruginosa probable transcriptional regulator Pa5283 TR:Q9HTS1 (EMBL:AE004941) (458 aa) fasta scores: E(): 3.7e-44, 38.987% id in 454 aa
NP_879278.1	Similar to Salmonella typhimurium Mg(2+) transport ATPase C MgtC SW:ATMC_SALTY (P22037) (231 aa) fasta scores: E(): 1.3e-12, 40.972% id in 144 aa, and to Agrobacterium radiobacter AttV TR:Q9WWC7 (EMBL:U59485) (194 aa) fasta scores: E(): 1e-30, 58.750% id in 160 aa
NP_879279.1	Similar to Rhizobium meliloti hypothetical transmembrane protein Smc03171 TR:CAC47481 (EMBL:AL591792) (250 aa) fasta scores: E(): 2.2e-67, 75.410% id in 244 aa, and to Agrobacterium tumefaciens Agr_l_786p TR:AAK88966 (EMBL:AE008238) (275 aa) fasta scores: E(): 8.8e-68, 74.502% id in 251 aa. Also similar to the N-terminal regions of BP1903 (51.261% identity in 238 aa overlap), and to BP1173 (51.250% identity in 240 aa overlap)
NP_879280.1	Similar to Rhodococcus spAD45  racemase IsoG TR:Q9RBP6 (EMBL:AJ249207) (405 aa) fasta scores: E(): 6.1e-48, 37.940% id in 398 aa, and to Streptomyces coelicolor  racemase Scf41.21 TR:Q9RJU8 (EMBL:AL117387) (403 aa) fasta scores: E(): 5.3e-41, 37.317% id in 410 aa
NP_879281.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_879282.1	Similar to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1.8e-32, 36.218% id in 312 aa, and to Pseudomonas putida hypothetical 34.5 kDa protein in clcB-clcD intergenic region precursor SW:YCLC_PSEPU (Q47100) (329 aa) fasta scores: E(): 3.2e-32, 35.294% id in 306 aa
NP_879283.1	Similar to Bacillus subtilis als operon regulatory protein AlsR SW:ALSR_BACSU (Q04778) (302 aa) fasta scores: E(): 1.9e-26, 30.592% id in 304 aa, and to Pseudomonas aeruginosa probable transcriptional regulator Pa1826 TR:Q9I2R9 (EMBL:AE004609) (301 aa) fasta scores: E(): 4.1e-30, 39.781% id in 274 aa
NP_879284.1	Similar to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase Pa1022 TR:Q9I4V2 (EMBL:AE004534) (381 aa) fasta scores: E(): 2.4e-29, 33.159% id in 383 aa, and to Mycobacterium tuberculosis CDC1551 acyl-CoA dehydrogenase, Mt3665 TR:AAK48023 (EMBL:AE007168) (385 aa) fasta scores: E(): 5.6e-27, 33.508% id in 382 aa
NP_879285.1	Similar to Mycobacterium tuberculosis CDC1551 acyl-CoA dehydrogenase,  Mt3669 TR:AAK48027 (EMBL:AE007168) (318 aa) fasta scores: E(): 1.4e-09, 30.132% id in 302 aa, and to Streptomyces coelicolor acyl-CoA dehydrogenase Scf37.28C TR:Q9RJX3 (EMBL:AL133210) (362 aa) fasta scores: E(): 2.6e-05, 28.691% id in 359 aa
NP_879286.1	Similar to Alcaligenes eutrophus acetyl-CoA acetyltransferase PhbA SW:THIL_ALCEU (P14611) (393 aa) fasta scores: E(): 1.5e-60, 46.530% id in 389 aa, and to Rhizobium meliloti probable thiolase Sma1450 TR:AAK65449 (EMBL:AE007266) (396 aa) fasta scores: E(): 7e-83, 60.870% id in 391 aa. Also similar to BP0447 (53.684% identity in 380 aa overlap)
NP_879287.1	transposase for IS481 element
NP_879288.1	Similar to Alcaligenes eutrophus  regulator of catechol degradation CatR TR:Q9EV43 (EMBL:AF042281) (330 aa) fasta scores: E(): 2.1e-15, 28.136% id in 295 aa, and to Azorhizobium caulinodans nac gene TR:O66393 (EMBL:AJ006238) (311 aa) fasta scores: E(): 1.2e-21, 33.333% id in 300 aa
NP_879289.1	Similar to Escherichia coli cold shock protein CspA or B3556 SW:CSPA_ECOLI (P15277) (69 aa) fasta scores: E(): 9.5e-12, 55.385% id in 65 aa, and to Bordetella pertussis cold shock-like protein CspA SW:CSPA_BORPE (Q9Z5R4) (67 aa) fasta scores: E(): 2.9e-16, 68.657% id in 67 aa. Also similar to BP1770 (68.657% identity in 67 aa overlap), BP1772 (71.186% identity in 59 aa overlap), BP2757 (61.905% identity in 63 aa overlap), and to BP3871 (54.545% identity in 66 aa overlap).
NP_879290.1	Similar to Caulobacter crescentus hypothetical protein Cc3247 TR:Q9A3F7 (EMBL:AE005988) (108 aa) fasta scores: E(): 4, 34.524% id in 84 aa
NP_879291.1	Similar to Rhizobium meliloti  transcriptional regulator, GntR family protein Smb20773 TR:CAC49865 (EMBL:AL603647) (228 aa) fasta scores: E(): 7e-10, 32.203% id in 177 aa, and to Streptomyces coelicolor  GntR-family regulatory protein Scbac8d1.07C TR:CAC37896 (EMBL:AL591084) (263 aa) fasta scores: E(): 5.8e-22, 38.164% id in 207 aa
NP_879292.1	Similar to Homo sapiens delta-1-pyrroline-5-carboxylate dehydrogenase precursor AldH4a1 or P5cdh or AldH4 SW:PUT2_HUMAN (P30038) (563 aa) fasta scores: E(): 7.8e-101, 50.094% id in 531 aa, and to Mycobacterium tuberculosis delta-1-pyrroline-5-carboxylate dehydrogenase RocA or Rv1187 or Mtv005.23 TR:O50443 (EMBL:AL010186) (543 aa) fasta scores: E(): 1.7e-118, 58.868% id in 530 aa
NP_879293.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa2002 TR:Q9I2A7 (EMBL:AE004626) (474 aa) fasta scores: E(): 7.3e-97, 53.564% id in 463 aa, and to Haemophilus influenzae short-chain fatty acids transporter AtoE or Hi0772 SW:ATOE_HAEIN (P44051) (447 aa) fasta scores: E(): 9.5e-33, 28.788% id in 462 aa
NP_879294.1	Similar to Salmonella typhimurium thiosulfate reductase precursor PhsA SW:PHSA_SALTY (P37600) (758 aa) fasta scores: E(): 6.8e-17, 23.279% id in 799 aa, and to Archaeoglobus fulgidus molybdopterin oxidoreductase, molybdopterin binding subunit Af1203 TR:O29065 (EMBL:AE001021) (741 aa) fasta scores: E(): 2.9e-26, 26.489% id in 789 aa
NP_879295.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa4173 TR:Q9HWK8 (EMBL:AE004833) (132 aa) fasta scores: E(): 1.7e-40, 75.194% id in 129 aa, and to Escherichia coli O157:H7 EDL933 Orf, hypothetical protein YjgH TR:AAG59447 (EMBL:AE005657) (131 aa) fasta scores: E(): 3.7e-30, 62.791% id in 129 aa
NP_879296.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa4174 TR:Q9HWK7 (EMBL:AE004834) (307 aa) fasta scores: E(): 3.7e-80, 70.588% id in 306 aa, and to Rhizobium meliloti  transcription regulator protein Smc01092 TR:CAC41866 (EMBL:AL591783) (296 aa) fasta scores: E(): 5.1e-50, 46.918% id in 292 aa
NP_879297.1	Similar to Rhodococcus erythropolis dehydratase/racemase TR:Q9AH11 (EMBL:AF323606) (400 aa) fasta scores: E(): 2.6e-21, 29.398% id in 415 aa, and to Caulobacter crescentus hypothetical protein Cc3562 TR:Q9A2J9 (EMBL:AE006014) (433 aa) fasta scores: E(): 7.5e-21, 29.056% id in 413 aa
NP_879298.1	Similar to Salmonella enteritidis FkbR2 =TR:AAK97549 (EMBL:AF376036) (175 aa) fasta scores: E(): 1.7e-27, 55.634% id in 142 aa, and to Streptomyces hygroscopicus varascomyceticus FkbR2 TR:Q9KIF1 (EMBL:AF235504) (175 aa) fasta scores: E(): 7e-27, 52.055% id in 146 aa
NP_879299.1	Similar to Escherichia coli cyn operon transcriptional activator CynR or B0338 SW:CYNR_ECOLI (P27111) (311 aa) fasta scores: E(): 2.3e-21, 31.119% id in 286 aa, and to Rhizobium meliloti  transcriptional regulator protein Smb20123 TR:CAC48523 (EMBL:AL603642) (298 aa) fasta scores: E(): 7.4e-25, 30.104% id in 289 aa
NP_879300.1	Similar to Caulobacter crescentus hypothetical protein Cc3562 TR:Q9A2J9 (EMBL:AE006014) (433 aa) fasta scores: E(): 1.5e-66, 42.750% id in 400 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3733 TR:Q9HXQ9 (EMBL:AE004792) (409 aa) fasta scores: E(): 2.3e-59, 40.786% id in 407 aa
NP_879301.1	transposase for IS481 element
NP_879302.1	Similar to Rhizobium loti probable transcriptional regulator Mll1317 TR:Q98KU4 (EMBL:AP002997) (128 aa) fasta scores: E(): 1.2e-16, 44.915% id in 118 aa, and to Pseudomonas aeruginosa probable transcriptional regulator Pa2016 TR:Q9I295 (EMBL:AE004628) (134 aa) fasta scores: E(): 1.9e-16, 50.000% id in 122 aa
NP_879303.1	Similar to Caulobacter crescentus metallo-beta-lactamase family protein Cc0395 TR:Q9AB39 (EMBL:AE005712) (317 aa) fasta scores: E(): 2.2e-44, 39.812% id in 319 aa, and to Deinococcus radiodurans conserved hypothetical protein Dr2076 TR:Q9RSP8 (EMBL:AE002043) (347 aa) fasta scores: E(): 1.8e-14, 29.969% id in 327 aa
NP_879304.1	transposase for IS481 element
NP_879305.1	Similar to Clostridium acetobutylicum acetyl-CoA acetyltransferase Thl or Cac2873 SW:THL_CLOAB (P45359) (392 aa) fasta scores: E(): 4e-66, 50.674% id in 371 aa, and to Pseudomonas putida FadaX fadaX TR:Q9AHY0 (EMBL:AF290950) (397 aa) fasta scores: E(): 4e-84, 61.579% id in 380 aa
NP_879306.1	Similar to Myxococcus xanthus acetyl-CoA carboxylase carboxyltransferase AccB TR:Q9FAF6 (EMBL:AB039884) (538 aa) fasta scores: E(): 1.7e-93, 47.330% id in 543 aa, and to Homo sapiens 3-methylcrotonyl-Coa carboxylase subunit MccB TR:AAK49409 (EMBL:AF261884) (563 aa) fasta scores: E(): 8.1e-142, 68.182% id in 528 aa
NP_879307.1	Similar to Myxococcus xanthus acetyl-Coa Carboxylase biotin carboxylase subunit AccA TR:Q9FAF5 (EMBL:AB039884) (573 aa) fasta scores: E(): 8.6e-85, 46.667% id in 570 aa, and to Escherichia coli biotin carboxylase AccC or FabG or B3256 SW:ACCC_ECOLI (P24182) (449 aa) fasta scores: E(): 6.6e-76, 51.106% id in 452 aa. Also similar to BP0889 (50.224% identity in 446 aa overlap), and BP2996 (47.903% identity in 453 aa overlap)
NP_879308.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3012 TR:Q9HZJ4 (EMBL:AE004726) (124 aa) fasta scores: E(): 9.3e-07, 42.667% id in 75 aa, and to Clostridium acetobutylicum hypothetical protein Cac1208 TR:Q97JR5 (EMBL:AE007634) (173 aa) fasta scores: E(): 0.75, 33.333% id in 57 aa
NP_879309.1	DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine
NP_879310.1	Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.9e-42, 41.956% id in 317 aa, and to Agrobacterium tumefaciens Agr_l_312p TR:AAK88723 (EMBL:AE008213) (329 aa) fasta scores: E(): 3.3e-40, 41.009% id in 317 aa
NP_879311.1	Similar to Arthrobacter sp metal-activated pyridoxal enzyme TR:O82872 (EMBL:AB010956) (379 aa) fasta scores: E(): 8.3e-99, 71.698% id in 371 aa, and to Alcaligenes xylosoxydans xylosoxydans low-specificity D-threonine aldolase TR:Q9RBG6 (EMBL:AB026892) (377 aa) fasta scores: E(): 8.3e-44, 45.195% id in 385 aa
NP_879312.1	Similar to Brucella abortus 31 kDa immunogenic protein precursor Bcsp31 SW:BCSP_BRUAB (P12920) (329 aa) fasta scores: E(): 1.8e-68, 61.329% id in 331 aa, and to Archaeoglobus fulgidus immunogenic protein Af0635 TR:O29620 (EMBL:AE001060) (330 aa) fasta scores: E(): 1.7e-37, 45.098% id in 306 aa
NP_879313.1	Similar to Bacillus halodurans Bh2945 protein Bh2945 TR:Q9K8Q8 (EMBL:AP001517) (656 aa) fasta scores: E(): 1.6e-57, 41.705% id in 657 aa, and to Pasteurella multocida hypothetical protein Pm1580 TR:Q9CKN1 (EMBL:AE006195) (660 aa) fasta scores: E(): 1.5e-56, 37.065% id in 661 aa
NP_879314.1	Similar to Haemophilus ducreyi TonB-dependent heme receptor A precursor TdhA TR:O87381 (EMBL:AF052977) (739 aa) fasta scores: E(): 1.4e-134, 48.743% id in 716 aa, and to Haemophilus influenzae heme/hemopexin utilization protein C precursor HxuC or Hi0113 SW:HXC1_HAEIN (P44523) (744 aa) fasta scores: E(): 2.8e-139, 48.299% id in 735 aa
NP_879315.1	Similar to Escherichia coli protein Smg or B3284 SW:SMG_ECOLI (P30853) (157 aa) fasta scores: E(): 3.5e-12, 40.506% id in 158 aa, and to Vibrio cholerae Smg protein Vc0049 TR:Q9KVU0 (EMBL:AE004096) (158 aa) fasta scores: E(): 4.1e-12, 39.490% id in 157 aa
NP_879316.1	Similar to Pasteurella multocida hypothetical protein Pm0986 TR:Q9CM56 (EMBL:AE006137) (824 aa) fasta scores: E(): 4e-10, 26.310% id in 897 aa
NP_879317.1	decatenates replicating daughter chromosomes
NP_879318.1	Similar to Rhizobium loti ABC transporter substrate-binding protein Mlr7949 TR:Q984L7 (EMBL:AP003013) (337 aa) fasta scores: E(): 2.5e-08, 25.085% id in 295 aa, and to Agrobacterium tumefaciens Agr_l_1197p TR:AAK89177 (EMBL:AE008258) (333 aa) fasta scores: E(): 2.6e-07, 25.267% id in 281 aa
NP_879319.1	Similar to Streptomyces coelicolor  ABC transporter ATP-binding protein Sc8g12.21 TR:Q9KYY4 (EMBL:AL355753) (270 aa) fasta scores: E(): 3.4e-32, 45.312% id in 256 aa, and to Agrobacterium tumefaciens Agr_l_1200p agr_l_1200 TR:AAK89178 (EMBL:AE008258) (273 aa) fasta scores: E(): 2.9e-34, 48.261% id in 230 aa
NP_879320.1	Similar to Escherichia coli taurine transport system permease TauC or SsiC or B0367 SW:TAUC_ECOLI (Q47539) (275 aa) fasta scores: E(): 7.1e-16, 28.195% id in 266 aa, and to Rhizobium loti ABC transporter permease Mlr7951 TR:Q984L5 (EMBL:AP003013) (292 aa) fasta scores: E(): 8.7e-36, 37.681% id in 276 aa
NP_879321.1	Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate
NP_879322.1	Similar to Ustilago maydis indole-3-acetaldehyde dehydrogenase Iad1 TR:Q92460 (EMBL:U74468) (497 aa) fasta scores: E(): 1.2e-68, 42.827% id in 474 aa, and to Bacillus halodurans NADP-dependent aldehyde dehydrogenase DhaS or Bh0539 TR:Q9KFE2 (EMBL:AP001508) (498 aa) fasta scores: E(): 1.3e-69, 41.788% id in 481 aa
NP_879323.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
NP_879324.1	Similar to Saccharomyces cerevisiae acetolactate synthase, mitochondrial precursor Ilv2 or Smr1 or Ymr108w or Ym9718.07 SW:ILVB_YEAST (P07342) (687 aa) fasta scores: E(): 1.7e-87, 42.710% id in 583 aa, and to Rhizobium meliloti probable acetolactate synthase isozyme III large subunit protein TR:CAC46693 (EMBL:AL591789) (592 aa) fasta scores: E(): 1.3e-81, 52.860% id in 577 aa. Also similar to BP0789 (50.000% identity in 580 aa overlap)
NP_879325.1	Similar to Pseudomonas putida bkd operon transcriptional regulator BkdR SW:BKDR_PSEPU (P42179) (161 aa) fasta scores: E(): 1.3e-19, 39.073% id in 151 aa, and to Pseudomonas aeruginosa probable transcriptional regulator Pa4508 TR:Q9HVR3 (EMBL:AE004864) (157 aa) fasta scores: E(): 1.4e-20, 42.105% id in 152 aa. Also similar to BP2981 (41.333% identity in 150 aa overlap), and to BP1122 (42.667% identity in 150 aa overlap)
NP_879326.1	Similar to Escherichia coli O157:H7 hypothetical 36.8 kDa protein Ecs2127 TR:BAB35550 (EMBL:AP002557) (321 aa) fasta scores: E(): 2.3e-34, 38.170% id in 317 aa, and to Rhizobium loti Mll4386 protein TR:Q98E66 (EMBL:AP003004) (309 aa) fasta scores: E(): 8.8e-45, 45.724% id in 304 aa
NP_879327.1	Similar to Xylella fastidiosa hypothetical protein Xf1478 TR:Q9PDA1 (EMBL:AE003977) (139 aa) fasta scores: E(): 4.3e-20, 48.227% id in 141 aa, and to Homo sapiens similar to kiaa0304 gene product TR:AAH07353 (EMBL:BC007353) (175 aa) fasta scores: E(): 1.8e-14, 37.908% id in 153 aa
NP_879328.1	DHBP synthase; functions during riboflavin biosynthesis
NP_879329.1	transposase for IS481 element
NP_879330.1	Similar to Clostridium perfringens choloylglycine hydrolase SW:CBH_CLOPE (P54965) (329 aa) fasta scores: E(): 1.7e-06, 25.959% id in 339 aa, and to Rhizobium loti Mlr8141 protein TR:Q983W5 (EMBL:AP003013) (350 aa) fasta scores: E(): 7.4e-110, 80.059% id in 341 aa
NP_879331.1	Similar to Escherichia coli ribonuclease E Rne or Ams or Hmp1 or B1084 SW:RNE_ECOLI (P21513) (1061 aa) fasta scores: E(): 1.6e-93, 44.328% id in 1049 aa, and to Neisseria meningitidis ribonuclease E Nmb0196 TR:Q9K1F8 (EMBL:AE002377) (919 aa) fasta scores: E(): 5.8e-109, 50.558% id in 985 aa
NP_879332.1	Similar to Escherichia coli ribosomal large subunit pseudouridine synthase C RluC or B1086 SW:RLUC_ECOLI (P23851) (319 aa) fasta scores: E(): 5.8e-52, 50.000% id in 316 aa, and to Pasteurella multocida RluC or Pm0992 TR:Q9CM51 (EMBL:AE006138) (326 aa) fasta scores: E(): 1e-53, 50.157% id in 319 aa
NP_879333.1	Similar to Erwinia chrysanthemi indigoidine systhesis protein IdgB TR:Q9KHB5 (EMBL:AF265211) (230 aa) fasta scores: E(): 4.8e-18, 40.777% id in 206 aa, and to Pseudomonas aeruginosa probable hydrolase Pa2974 TR:Q9HZN0 (EMBL:AE004723) (230 aa) fasta scores: E(): 2.1e-26, 44.340% id in 212 aa
NP_879334.1	in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ
NP_879335.1	in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme
NP_879336.1	transposase for IS481 element
NP_879337.1	Similar to Rhizobium meliloti  transcription regulator protein Smc03170 TR:CAC47480 (EMBL:AL591792) (279 aa) fasta scores: E(): 2.4e-11, 30.515% id in 272 aa, and to Bacillus halodurans Bh0401 protein TR:Q9KFS6 (EMBL:AP001508) (299 aa) fasta scores: E(): 4.2e-08, 27.119% id in 295 aa
NP_879338.1	Similar to Escherichia coli L-lactate dehydrogenase LldD or LctD or B3605 SW:LLDD_ECOLI (P33232) (396 aa) fasta scores: E(): 3.5e-63, 46.825% id in 378 aa, and to Pseudomonas aeruginosa L-lactate dehydrogenase LldA or Pa2382 TR:Q9I197 (EMBL:AE004664) (383 aa) fasta scores: E(): 2.1e-118, 78.068% id in 383 aa
NP_879339.1	Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 4.4e-38, 36.013% id in 311 aa, and to Comamonas testosteroni Orf4 protein TR:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 3e-34, 32.923% id in 325 aa
NP_879340.1	Similar to Pseudomonas aeruginosa probable amidase Pa4342 TR:Q9HW59 (EMBL:AE004850) (494 aa) fasta scores: E(): 3.5e-67, 45.436% id in 482 aa, and to Rhizobium loti amidotransferase, subunit A Mlr3187 TR:Q98GT2 (EMBL:AP003001) (472 aa) fasta scores: E(): 1.8e-58, 41.226% id in 473 aa
NP_879341.1	Similar to Pseudomonas putida pca regulon regulatory protein PcaR SW:PCAR_PSEPU (Q52154) (291 aa) fasta scores: E(): 1.8e-22, 31.250% id in 272 aa, and to Rhizobium meliloti  transcriptional regulator, Iclr family protein Smb20586 TR:CAC49898 (EMBL:AL603647) (251 aa) fasta scores: E(): 1.8e-23, 33.471% id in 242 aa
NP_879342.1	negatively supercoils closed circular double-stranded DNA
NP_879343.1	binds the polymerase to DNA and acts as a sliding clamp
NP_879344.1	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.
NP_879345.1	in Escherichia coli transcription of this gene is enhanced by polyamines
NP_879346.1	protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates
NP_879347.1	Similar to Pseudomonas putida hypothetical 9.2 kDa protein in rnpA 3'region SW:YIDD_PSEPU (P25753) (81 aa) fasta scores: E(): 2.2e-18, 65.714% id in 70 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2045 SW:YK45_PSEAE (Q9I270) (86 aa) fasta scores: E(): 3.4e-16, 57.831% id in 83 aa
NP_879348.1	functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria
NP_879349.1	transposase for IS481 element
NP_879350.1	Similar to Rhizobium meliloti  transcription regulator protein Smc01330 TR:CAC45914 (EMBL:AL591787) (313 aa) fasta scores: E(): 1.1e-45, 44.027% id in 293 aa, and to Pseudomonas aeruginosa probable transcriptional regulator Pa1961 TR:Q9I2E3 (EMBL:AE004622) (311 aa) fasta scores: E(): 2.4e-42, 43.464% id in 306 aa
NP_879351.1	no significant database matches
NP_879352.1	no significant database matches
NP_879354.1	Similar to Escherichia coli shufflon-specific DNA recombinase Rci SW:RCI1_ECOLI (P10487) (384 aa) fasta scores: E(): 7.5e-17, 30.796% id in 289 aa, and to Pasteurella multocida  integrase/recombinase Rci TR:Q9L6A5 (EMBL:AF237934) (329 aa) fasta scores: E(): 2.4e-36, 37.651% id in 332 aa
NP_879355.1	Similar to Bacteriophage P4 hypothetical 9.7 kDa protein SW:Y9K_BPP4 (P12552) (88 aa) fasta scores: E(): 0.82, 30.357% id in 56 aa, and to Vibrio cholerae transcriptional regulator Vc0497 TR:Q9KUL8 (EMBL:AE004136) (66 aa) fasta scores: E(): 0.023, 28.571% id in 63 aa
NP_879356.1	no significant database matches
NP_879357.1	Similar to Bacteriophage D3 Orf39 orf39 TR:Q9MC83 (EMBL:AF165214) (108 aa) fasta scores: E(): 0.018, 36.937% id in 111 aa, and to Mycobacteriophage TM4 Gp13 TR:Q9ZX64 (EMBL:AF068845) (139 aa) fasta scores: E(): 9.6, 32.609% id in 92 aa
NP_879358.1	no significant database matches
NP_879359.1	Similar to the internal region of Bordetella pertussis pertactin outer membrane protein PrnA TR:AAK92093 (EMBL:AF348485) (910 aa) fasta scores: E(): 2.5, 25.767% id in 163 aa, and to Bordetella pertussis pertactin Prn7 TR:Q9S6N1 (EMBL:AJ133784) (910 aa) fasta scores: E(): 3.4, 24.540% id in 163 aa
NP_879360.1	Similar to Escherichia coli O157:H7 exonuclease Ecs1174 TR:BAB34597 (EMBL:AP002554) (226 aa) fasta scores: E(): 2.4e-11, 30.918% id in 207 aa, and to Bacteriophage VT2-Sa exonuclease Exo TR:Q9T1N7 (EMBL:AP000363) (226 aa) fasta scores: E(): 2.8e-11, 30.918% id in 207 aa
NP_879361.1	Similar to Escherichia coli RecT protein RecT or B1349 SW:RECT_ECOLI (P33228) (269 aa) fasta scores: E(): 3.4e-09, 30.047% id in 213 aa, and to Escherichia coli O157:H7 recombinase RecT protein Ecs1933 TR:BAB35356 (EMBL:AP002556) (269 aa) fasta scores: E(): 1.3e-09, 30.516% id in 213 aa
NP_879362.1	no significant database matches
NP_879363.1	no significant database matches
NP_879364.1	no significant database matches
NP_879365.1	transposase for IS481 element
NP_879366.1	no significant database matches
NP_879368.1	transposase for IS481 element
NP_879369.1	Similar to Saccharomyces cerevisiae highdosage growth inhibitor Hig1 TR:BAB20815 (EMBL:AB050475) (129 aa) fasta scores: E(): 6.3e-10, 34.579% id in 107 aa, and to Halobacterium sp Vng2099C TR:Q9HNH7 (EMBL:AE005099) (127 aa) fasta scores: E(): 2e-10, 38.532% id in 109 aa
NP_879370.1	Similar to Loligo opalescens S-crystallin TR:Q25368 (EMBL:U19300) (217 aa) fasta scores: E(): 3.2e-06, 24.537% id in 216 aa, and to Rhizobium meliloti probable glutathione S-transferase TR:CAC49678 (EMBL:AL603646) (240 aa) fasta scores: E(): 5.3e-42, 52.321% id in 237 aa
NP_879371.1	Similar to Escherichia coli HflC protein HflC or HflA or B4175 or Z5782 or Ecs5151 SW:HFLC_ECOLI (P25661) (334 aa) fasta scores: E(): 2.4e-06, 24.806% id in 258 aa, and to Thermotoga maritima FtsH protease activity modulator HflC Tm1823 TR:Q9X2E3 (EMBL:AE001819) (283 aa) fasta scores: E(): 4.3e-09, 26.210% id in 248 aa
NP_879372.1	Similar to Escherichia coli hypothetical 12.0 kDa protein in baeR-ogrK intergenic region YegP or B2080 SW:YEGP_ECOLI (P76402) (110 aa) fasta scores: E(): 2.1e-17, 54.545% id in 110 aa, and to Pasteurella multocida hypothetical protein Pm0519 TR:Q9CNB3 (EMBL:AE006087) (114 aa) fasta scores: E(): 7.9e-14, 47.222% id in 108 aa
NP_879373.1	Similar to Arthrobacter sp metal-activated pyridoxal enzyme TR:O82872 (EMBL:AB010956) (379 aa) fasta scores: E(): 1.6e-16, 31.026% id in 390 aa, and to Agrobacterium tumefaciens Agr_l_1808p TR:AAK89478 (EMBL:AE008289) (397 aa) fasta scores: E(): 7.1e-74, 55.526% id in 380 aa
NP_879374.1	Similar to Pseudomonas putida 2-haloalkanoic acid dehalogenase H-109 DehH109 SW:HAD2_PSEPU (Q59728) (224 aa) fasta scores: E(): 1.5e-05, 28.241% id in 216 aa, and to Thermus thermophilus hypothetical 24.1 kDa protein YsaA TR:Q9F1Q2 (EMBL:AB048605) (218 aa) fasta scores: E(): 6.3e-07, 35.567% id in 194 aa
NP_879375.1	Pseudogene (remnant). Similar to the N-terminal region of Escherichia coli  lambdoid prophage Rac integrase IntR or B1345 SW:INTR_ECOLI (P76056) (411 aa) fasta scores: E(): 0.7, 39.583% id in 48 aa, and to Bacteriophage 933W integrase Int TR:Q9XJG6 (EMBL:AF125520) (444 aa) fasta scores: E(): 5.1, 37.778% id in 45 aa
NP_879376.2	no significant database matches
NP_879377.1	Similar to Escherichia coli anti-toxin entericidin A precursor EcnA or B4147.1 SW:ECNA_ECOLI (P56548) (41 aa) fasta scores: E(): 0.86, 42.857% id in 42 aa, and to Rickettsia conorii hypothetical 6.7 kDa protein Rc1154 TR:AAL03692 (EMBL:AE008664) (64 aa) fasta scores: E(): 0.008, 46.512% id in 43 aa. Note in E. coli ecnA is located next to the bacteriolytic toxin ecnB. This is not the situation in B. pertusis. However, B. pertusis does possess an ecnB orthologue BP2531. B. pertusis also carries a second possible ecnA paralogue, BP2565
NP_879378.1	Similar to Mycobacterium tuberculosis PgrS-family protein Rv3345c or Mtv004.01C or Mtv016.45C TR:O53395 (EMBL:AL021841) (1538 aa) fasta scores: E(): 5.8e-17, 26.329% id in 1618 aa, and to Salmonella typhimurium ShdA TR:Q9XCJ4 (EMBL:AF140550) (2035 aa) fasta scores: E(): 6.6e-16, 26.428% id in 2206 aa
NP_879379.1	Similar to Burkholderia cepacia ureidoglycolate hydrolase AllA TR:Q9AP01 (EMBL:AF317836) (177 aa) fasta scores: E(): 0.0025, 28.289% id in 152 aa, and to Rhodobacter capsulatus probable ureidoglycolate hydrolase SW:ALLA_RHOCA (O68109) (161 aa) fasta scores: E(): 0.0036, 32.558% id in 129 aa
NP_879380.1	Similar to Variovorax paradoxus 2,4-diphenoxyacetic acid gene cluster TR:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 3.2e-27, 34.323% id in 303 aa, and to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 3.5e-28, 32.407% id in 324 aa
NP_879381.1	Similar to Mycobacterium tuberculosis CDC1551 substrate--CoA ligase Mt2580 TR:AAK46884 (EMBL:AE007094) (547 aa) fasta scores: E(): 2.8e-44, 32.422% id in 512 aa, and to Rhizobium meliloti  fatty-acid-CoA ligase Smc00261 TR:CAC46268 (EMBL:AL591788) (549 aa) fasta scores: E(): 1.5e-41, 32.184% id in 522 aa
NP_879382.1	Similar to Pseudomonas putida efflux pump regulator SrpS TR:Q9R9U0 (EMBL:AF061937) (259 aa) fasta scores: E(): 4.8e-12, 33.471% id in 242 aa, and to Streptomyces coelicolor  transcriptional regulator Stah10.11C TR:Q9RKU6 (EMBL:AL132824) (270 aa) fasta scores: E(): 1.6e-11, 33.065% id in 248 aa
NP_879383.1	Similar to Clostridium acetobutylicum 3-hydroxybutyryl-CoA dehydratase Crt or Cac2712 SW:CRT_CLOAB (P52046) (261 aa) fasta scores: E(): 1.8e-17, 31.624% id in 234 aa, and to Sulfolobus solfataricus enoyl CoA hydratase Orf-C09_013 or Paaf-2 TR:Q9UX44 (EMBL:Y18930) (252 aa) fasta scores: E(): 2.7e-17, 29.279% id in 222 aa
NP_879384.1	Similar to Haemophilus influenzae hypothetical protein Hi1053 SW:YA53_HAEIN (Q57498) (113 aa) fasta scores: E(): 3.8e-17, 52.885% id in 104 aa, and to Neisseria meningitidis hypothetical protein Nmb1590 TR:Q9JYH0 (EMBL:AE002509) (111 aa) fasta scores: E(): 6.7e-16, 50.459% id in 109 aa
NP_879385.1	transposase for IS481 element
NP_879386.1	Similar to Bacillus caldovelox arginase RocF SW:ARGI_BACCD (P53608) (299 aa) fasta scores: E(): 3.5e-44, 44.000% id in 300 aa, and to Rhizobium loti arginase Mll6778 TR:Q988E1 (EMBL:AP003010) (310 aa) fasta scores: E(): 3.2e-44, 45.847% id in 301 aa
NP_879387.1	Similar to Bacillus subtilis ornithine aminotransferase RocD SW:OAT_BACSU (P38021) (401 aa) fasta scores: E(): 7.1e-82, 52.083% id in 384 aa, and to Bacillus halodurans ornithine aminotransferase RocD or Bh3943 TR:Q9K5Z2 (EMBL:AP001520) (400 aa) fasta scores: E(): 2.7e-84, 50.249% id in 402 aa
NP_879388.1	transposase for IS481 element
NP_879389.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa1269 TR:Q9I475 (EMBL:AE004556) (222 aa) fasta scores: E(): 1.7e-28, 42.347% id in 196 aa, and to Rhizobium loti transcriptional regulator Mlr7144 TR:Q986Z8 (EMBL:AP003011) (253 aa) fasta scores: E(): 2.9e-20, 34.715% id in 193 aa
NP_879390.1	Similar to Pseudomonas chlororaphis hypothetical 35.8 kDa protein TR:Q9L3W5 (EMBL:AJ271325) (336 aa) fasta scores: E(): 1.2e-36, 39.264% id in 326 aa, and to Pseudomonas sp hypothetical 35.9 kDa protein in tcbD-tcbE intergenic region precursor SW:YTCB_PSESQ (P27103) (336 aa) fasta scores: E(): 3.5e-36, 39.144% id in 327 aa
NP_879391.1	Similar to Rhizobium loti probable oxidoreductase Mll7103 TR:Q987C9 (EMBL:AP003011) (427 aa) fasta scores: E(): 1.1e-46, 39.394% id in 396 aa, and to Pseudomonas aeruginosa probable oxidoreductase Pa1028 TR:Q9I4U6 (EMBL:AE004535) (428 aa) fasta scores: E(): 7e-40, 37.084% id in 391 aa
NP_879392.1	4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown
NP_879393.1	catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit
NP_879394.1	Similar to Azotobacter vinelandii bacterioferritin Bfr SW:BFR_AZOVI (P22759) (156 aa) fasta scores: E(): 3.5e-05, 30.345% id in 145 aa, and to Pseudomonas aeruginosa probable bacterioferritin Pa4880 TR:Q9HUT3 (EMBL:AE004901) (177 aa) fasta scores: E(): 3.7e-41, 71.084% id in 166 aa
NP_879395.1	Similar to Eikenella corrodens lysine decarboxylase TR:Q9Z4R8 (EMBL:U89166) (183 aa) fasta scores: E(): 7.3e-25, 43.353% id in 173 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4923 SW:YDC3_PSEAE (P48636) (195 aa) fasta scores: E(): 8.9e-40, 53.684% id in 190 aa
NP_879396.1	no significant database matches
NP_879397.1	Similar to Caulobacter crescentus hydrolase, haloacid dehalogenase-like family cc1643 TR:Q9A7S7 (EMBL:AE005839) (246 aa) fasta scores: E(): 2.3e-26, 42.574% id in 202 aa, and to Agrobacterium radiobacter VirP protein TR:O52276 (EMBL:AF242881) (210 aa) fasta scores: E(): 1.4e-21, 36.318% id in 201 aa
NP_879398.1	Similar to Caulobacter crescentus hypothetical protein Cc2577 TR:Q9A580 (EMBL:AE005926) (204 aa) fasta scores: E(): 4.3e-46, 60.099% id in 203 aa, and to Rhizobium loti Mll0539 protein TR:Q98MK8 (EMBL:AP002995) (203 aa) fasta scores: E(): 9e-44, 58.000% id in 200 aa
NP_879399.1	modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth
NP_879400.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
NP_879401.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa2080 TR:Q9I235 (EMBL:AE004635) (416 aa) fasta scores: E(): 6.6e-108, 63.462% id in 416 aa, and to Rhizobium loti probable kynureninase Mll0621 TR:Q98MD7 (EMBL:AP002995) (415 aa) fasta scores: E(): 1.4e-87, 54.348% id in 414 aa
NP_879402.1	Similar to Escherichia coli leucine-responsive regulatory protein Lrp or AlsB or LivR or Ihb or Oppi or b0889 SW:LRP_ECOLI (P19494) (163 aa) fasta scores: E(): 4.8e-16, 38.667% id in 150 aa, and to Rhizobium meliloti leucine-responsive regulatory protein Lrp or R01568 or Smc01223 SW:LRP_RHIME (P56901) (156 aa) fasta scores: E(): 1.6e-18, 43.243% id in 148 aa
NP_879403.1	Similar to Escherichia coli Smf protein Smf or B3285/B3286 SW:SMF_ECOLI (P30852) (374 aa) fasta scores: E(): 1.5e-32, 43.974% id in 307 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0021 pa0021 TR:Q9I7A6 (EMBL:AE004441) (362 aa) fasta scores: E(): 5.2e-50, 51.639% id in 366 aa
NP_879404.1	catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA
NP_879405.1	no significant database matches
NP_879406.1	Similar to Rhizobium leguminosarum general L-amino acid-binding periplasmic protein AapJ precursor SW:AAPJ_RHILV (Q52812) (341 aa) fasta scores: E(): 3.3e-75, 56.932% id in 339 aa, and to Vibrio cholerae amino acid ABC transporter periplasmic amino acid-binding protein vc1362 TR:Q9KS97 (EMBL:AE004216) (342 aa) fasta scores: E(): 5.2e-79, 58.333% id in 336 aa
NP_879407.1	Similar to Thermococcus profundus multiple substrate aminotransferase TR:Q9V2W5 (EMBL:AB027131) (417 aa) fasta scores: E(): 2.9e-42, 36.693% id in 387 aa, and to Streptomyces coelicolor  aminotransferase Sce68.04C TR:Q9WX27 (EMBL:AL079345) (404 aa) fasta scores: E(): 8.4e-59, 48.429% id in 382 aa
NP_879408.1	Similar to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 8.8e-35, 36.957% id in 322 aa, and to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 8.3e-40, 38.907% id in 311 aa
NP_879409.1	Similar to Rhizobium loti Mll3326 protein TR:Q98GH4 (EMBL:AP003001) (179 aa) fasta scores: E(): 6.4e-18, 41.830% id in 153 aa, and to Neisseria meningitidis hypothetical protein Nmb1557 TR:Q9JYJ5 (EMBL:AE002506) (157 aa) fasta scores: E(): 1e-15, 40.541% id in 148 aa
NP_879410.1	specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport
NP_879411.1	Similar to Streptomyces coelicolor  membrane transport protein Sc5f8.18 TR:Q9K4K6 (EMBL:AL357613) (204 aa) fasta scores: E(): 4.7e-24, 42.714% id in 199 aa, and to Pseudomonas aeruginosa probable transporter Pa4365 TR:Q9HW36 (EMBL:AE004852) (200 aa) fasta scores: E(): 2.7e-22, 41.500% id in 200 aa
NP_879412.1	transposase for IS481 element
NP_879413.1	Similar to Rhizobium meliloti hypothetical/unknown protein Smc01026 TR:CAC46020 (EMBL:AL591787) (296 aa) fasta scores: E(): 0.25, 27.090% id in 299 aa, and to Agrobacterium tumefaciens Agr_c_2627p TR:AAK87216 (EMBL:AE008068) (292 aa) fasta scores: E(): 0.21, 27.852% id in 298 aa
NP_879414.1	catalyzes the formation of L-aspartate to iminoaspartate in NAD(+) biosynthesis
NP_879415.1	Similar to Escherichia coli homoserine/homoserine lactone efflux protein RhtB or B3824 SW:RHTB_ECOLI (P27847) (206 aa) fasta scores: E(): 1.6e-14, 31.100% id in 209 aa, and to Rhizobium meliloti  amino acid efflux transmembrane protein Smc02981 TR:CAC47452 (EMBL:AL591792) (211 aa) fasta scores: E(): 1.3e-40, 58.852% id in 209 aa
NP_879416.1	Similar to Escherichia coli Sun protein Sun or Fmu or Fmv or Rsmb or B3289 SW:SUN_ECOLI (P36929) (429 aa) fasta scores: E(): 7.1e-43, 36.406% id in 434 aa, and to Neisseria meningitidis Sun homolog Nma0162 TR:Q9JWZ0 (EMBL:AL162752) (419 aa) fasta scores: E(): 3.8e-54, 44.651% id in 430 aa
NP_879417.1	Similar to Neisseria meningitidis hypothetical protein Nma0161 TR:Q9JWZ1 (EMBL:AL162752) (199 aa) fasta scores: E(): 3.5e-12, 31.088% id in 193 aa, and to Neisseria meningitidis hypothetical protein Nmb0113 TR:Q9K1K4 (EMBL:AE002370) (180 aa) fasta scores: E(): 5.1e-11, 32.278% id in 158 aa
NP_879418.1	Similar to Azorhizobium caulinodans nitrogen regulation protein NtrY SW:NTRY_AZOCA (Q04850) (771 aa) fasta scores: E(): 8.8e-14, 29.107% id in 773 aa, and to Neisseria meningitidis nitrogen regulation protein NtrY, Nmb0114 TR:Q9K1K3 (EMBL:AE002370) (706 aa) fasta scores: E(): 6.2e-41, 37.748% id in 755 aa
NP_879419.1	Similar to Salmonella typhimurium transcriptional regulatory protein HydG SW:HYDG_SALTY (P25852) (441 aa) fasta scores: E(): 7.1e-09, 35.849% id in 159 aa, and to Neisseria meningitidis  two-component trancriptional regulator Nma0159 TR:Q9JWZ3 (EMBL:AL162752) (425 aa) fasta scores: E(): 1.2e-25, 53.939% id in 165 aa
NP_879420.1	involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain
NP_879421.1	Similar to Escherichia coli Trk system potassium uptake protein TrkH or B3849 or Z5371 or Ecs4777 SW:TRKH_ECOLI (P21166) (483 aa) fasta scores: E(): 4e-74, 42.798% id in 486 aa, and to Salmonella typhimurium Trk system potassium uptake protein TrkH or Stmd1.3 SW:TRKH_SALTY (Q9L6L2) (483 aa) fasta scores: E(): 2e-74, 43.004% id in 486 aa
NP_879422.1	Similar to Escherichia coli transcriptional regulator protein SlyA TR:Q9F8R8 (EMBL:AF242208) (135 aa) fasta scores: E(): 2.1e-06, 29.630% id in 135 aa, and to Streptomyces coelicolor  transcriptional regulator Sc4c6.14 TR:Q9XAM6 (EMBL:AL079355) (154 aa) fasta scores: E(): 8.9e-15, 40.000% id in 135 aa
NP_879423.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa4618 TR:Q9HVH3 (EMBL:AE004876) (323 aa) fasta scores: E(): 7.3e-44, 42.271% id in 317 aa. Also similar to BP2128, 50.893% identity (53.271% ungapped) in 336 aa overlap.
NP_879424.1	Similar to Caulobacter crescentus hypothetical protein Cc0019 TR:Q9AC47 (EMBL:AE005676) (210 aa) fasta scores: E(): 7e-13, 41.176% id in 204 aa, and to Agrobacterium tumefaciens Agr_pat_742p TR:AAK90876 (EMBL:AE007918) (230 aa) fasta scores: E(): 1.5e-09, 37.056% id in 197 aa
NP_879425.1	Similar to Synechocystis sp hypothetical 38.3 kDa protein Slr0619 TR:Q55861 (EMBL:D64004) (348 aa) fasta scores: E(): 1e-44, 47.569% id in 288 aa, and to Agrobacterium tumefaciens Agr_c_4595p TR:AAK88260 (EMBL:AE008165) (327 aa) fasta scores: E(): 3.2e-35, 45.260% id in 327 aa
NP_879426.1	Similar to Serratia marcescens maleate cis-trans isomerase MaiA TR:Q9KWI0 (EMBL:AB035810) (250 aa) fasta scores: E(): 3.6e-69, 78.800% id in 250 aa, and to Bacillus stearothermophilus maleate cis-trans isomerase MaiA TR:Q9WX57 (EMBL:AB015134) (251 aa) fasta scores: E(): 4.3e-57, 65.339% id in 251 aa. Identical to BP1955, 99.600% identity (99.600% ungapped) in 250 aa overlap.
NP_879427.1	Similar to Pyrococcus horikoshii hypothetical 34.8 kDa protein Ph1048 TR:O58749 (EMBL:AP000004) (320 aa) fasta scores: E(): 1.5e-06, 25.429% id in 350 aa. Identical to BP1957, 100.000% identity (100.000% ungapped) in 343 aa overlap.
NP_879428.1	Similar to Arthrobacter sp N-carbamoylsarcosine amidase SW:CSH_ARTSP (P32400) (264 aa) fasta scores: E(): 2e-14, 32.673% id in 202 aa, and to Thermoplasma volcanium isochorismatase Tvg0787823 TR:Q97AM6 (EMBL:AP000993) (175 aa) fasta scores: E(): 6.1e-07, 28.409% id in 176 aa. Identical to BP1958, 100.000% identity (100.000% ungapped) in 205 aa overlap.
NP_879429.1	Similar to Pseudomonas sp salicylate-5-hydroxylase small oxygenase component NagH TR:O52380 (EMBL:AF036940) (161 aa) fasta scores: E(): 1.4e-17, 36.364% id in 154 aa, and to Burkholderia sp RasC ferredoxin oxidoreductase TR:Q9Z5Q7 (EMBL:U62430) (161 aa) fasta scores: E(): 8.8e-18, 36.364% id in 154 aa
NP_879430.1	Similar to Pseudomonas sp salicylate-5-hydroxylase large oxygenase component NagG TR:O52379 (EMBL:AF036940) (423 aa) fasta scores: E(): 4.2e-80, 46.731% id in 413 aa, and to Pseudomonas aeruginosa O-halobenzoate dioxygenase alpha subunit OhbB TR:O87618 (EMBL:AF087482) (421 aa) fasta scores: E(): 2.5e-76, 46.229% id in 411 aa
NP_879431.1	Similar to Pseudomonas sp ferredoxin reductase BphA4 TR:Q52437 (EMBL:D16831) (408 aa) fasta scores: E(): 5.8e-45, 40.244% id in 410 aa, and to Rhizobium meliloti MocF TR:Q9R9P5 (EMBL:AF076471) (408 aa) fasta scores: E(): 2.2e-49, 43.826% id in 413 aa
NP_879432.1	Similar to Pseudomonas putida naphthalene 1,2-dioxygenase system ferredoxin component NdoA or NahaB or DoxA or NdoC1 SW:NDOA_PSEPU (P23082) (103 aa) fasta scores: E(): 1.4e-20, 55.882% id in 102 aa, and to Pseudomonas sp ferredoxin NagaB or PahaB TR:O52381 (EMBL:AF036940) (104 aa) fasta scores: E(): 1.9e-19, 49.505% id in 101 aa
NP_879433.1	Similar to Rhodobacter sphaeroides periplasmic mannitol-binding protein SmoM TR:O30835 (EMBL:AF018073) (365 aa) fasta scores: E(): 2.1e-68, 47.411% id in 367 aa, and to Agrobacterium tumefaciens Agr_pat_385p TR:AAK90643 (EMBL:AE007896) (370 aa) fasta scores: E(): 3.8e-69, 48.189% id in 359 aa. Also similar to BP2963 (55.249% identity in 362 aa overlap), BP1487 (54.521% identity in 365 aa overlap), and to BP2661 (48.916% identity in 323 aa overlap)
NP_879434.1	Similar to Pseudomonas putida quinoline 2-oxidoreductase, large chain QorL TR:P72224 (EMBL:X98131) (788 aa) fasta scores: E(): 1.2e-91, 36.882% id in 789 aa, and to Mycobacterium tuberculosis CDC1551 carbon monoxide dehydrogenase, large subunit,  Mt0388 TR:AAK44610 (EMBL:AE006943) (799 aa) fasta scores: E(): 3.4e-84, 36.181% id in 796 aa
NP_879435.1	Similar to Pseudomonas putida quinoline 2-oxidoreductase, medium chain QorM TR:P72222 (EMBL:X98131) (288 aa) fasta scores: E(): 4.4e-20, 38.182% id in 220 aa, and to Arthrobacter nicotinovorans nicotine dehydrogenase, medium chain NdhA TR:Q59127 (EMBL:X75338) (283 aa) fasta scores: E(): 4.5e-23, 36.015% id in 261 aa
NP_879436.1	The N-terminal region of this CDS is similar to Pseudomonas putida quinoline 2-oxidoreductase, small chain QorS TR:P72223 (EMBL:X98131) (168 aa) fasta scores: E(): 2.3e-22, 47.260% id in 146 aa, and to Mycobacterium tuberculosis CDC1551 carbon monoxide dehydrogenase, small subunit,  Mt0389 TR:AAK44611 (EMBL:AE006943) (159 aa) fasta scores: E(): 4.7e-22, 50.000% id in 146 aa.
NP_879437.1	Similar to Rhizobium loti Mlr6799 protein Mlr6799 TR:Q988C5 (EMBL:AP003010) (336 aa) fasta scores: E(): 1.4e-16, 27.879% id in 330 aa, and to Agrobacterium tumefaciens Agr_l_129gMp TR:AAK88849 (EMBL:AE008228) (329 aa) fasta scores: E(): 2.8e-16, 26.074% id in 326 aa
NP_879438.1	Similar to Arthrobacter keyseri transporter ATPase PtrA TR:Q9AGL2 (EMBL:AF331043) (275 aa) fasta scores: E(): 3.8e-32, 48.018% id in 227 aa, and to Agrobacterium tumefaciens Agr_l_1027gMp TR:AAK88847 (EMBL:AE008228) (269 aa) fasta scores: E(): 1.5e-36, 48.583% id in 247 aa
NP_879439.1	Similar to Rhizobium loti ABC transporter permease Mlr6798 TR:Q988C6 (EMBL:AP003010) (275 aa) fasta scores: E(): 9.2e-31, 39.592% id in 245 aa, and to Agrobacterium tumefaciens Agr_l_128gMp TR:AAK88848 (EMBL:AE008228) (267 aa) fasta scores: E(): 8e-32, 42.105% id in 228 aa
NP_879440.1	Similar to Rhizobium loti Mll5171 protein Mll5171 TR:Q98CF5 (EMBL:AP003005) (194 aa) fasta scores: E(): 5.1e-34, 50.785% id in 191 aa, and to Agrobacterium tumefaciens Agr_pat_389p TR:AAK90645 (EMBL:AE007896) (222 aa) fasta scores: E(): 5.4e-38, 53.333% id in 180 aa. Almost identical to BP1488, 99.522% identity in 209 aa overlap.
NP_879441.1	Similar to Rhizobium meliloti hypothetical transmembrane protein Smc04249 TR:CAC46498 (EMBL:AL591788) (597 aa) fasta scores: E(): 4.8e-127, 61.922% id in 562 aa, and to Rhizobium loti Mll5170 protein TR:Q98CF6 (EMBL:AP003005) (589 aa) fasta scores: E(): 7.4e-122, 61.749% id in 549 aa
NP_879442.1	ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity
NP_879443.1	Similar to Neisseria meningitidis hypothetical protein Nmb0271 TR:Q9K196 (EMBL:AE002383) (262 aa) fasta scores: E(): 1.6e-17, 35.102% id in 245 aa, and to Xylella fastidiosa biotin synthesis protein Xf2099 TR:Q9PBP1 (EMBL:AE004025) (295 aa) fasta scores: E(): 1.1e-13, 33.910% id in 289 aa
NP_879444.1	Similar to Pseudomonas aeruginosa probable phosphoribosyl transferase Pa0489 TR:Q9I629 (EMBL:AE004486) (241 aa) fasta scores: E(): 2.9e-13, 39.109% id in 202 aa, and to Neisseria meningitidis hypothetical protein Nma2217 TR:Q9JSM9 (EMBL:AL162758) (241 aa) fasta scores: E(): 1.5e-12, 35.644% id in 202 aa
NP_879445.1	Similar to Escherichia coli hypothetical tRNA/rRNA methyltransferase YibK or B3606 SW:YIBK_ECOLI (P33899) (157 aa) fasta scores: E(): 5.4e-28, 51.282% id in 156 aa, and to Neisseria meningitidis RNA methyltransferase, TrmH family Nmb0268 TR:Q9K199 (EMBL:AE002383) (154 aa) fasta scores: E(): 8.9e-33, 58.974% id in 156 aa
NP_879446.1	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate
NP_879447.1	molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA
NP_879448.1	Similar to Escherichia coli glutaredoxin 3 GrxC or B3610 SW:GLR3_ECOLI (P37687) (82 aa) fasta scores: E(): 5.4e-14, 56.250% id in 80 aa, and to Pseudomonas fluorescens glutaredoxin 3 Grx3 TR:AAK38716 (EMBL:AF359453) (84 aa) fasta scores: E(): 4.2e-15, 56.627% id in 83 aa
NP_879449.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa5130 TR:Q9HU54 (EMBL:AE004926) (139 aa) fasta scores: E(): 6.5e-09, 33.846% id in 130 aa, and to Xylella fastidiosa hypothetical protein Xf1800 TR:Q9PCH9 (EMBL:AE004001) (161 aa) fasta scores: E(): 2.8e-08, 30.935% id in 139 aa
NP_879450.1	2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate
NP_879451.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa5133 TR:Q9HU51 (EMBL:AE004926) (428 aa) fasta scores: E(): 4.3e-20, 33.665% id in 502 aa, and to Escherichia coli hypothetical 46.6 kDa protein in secB-tdh intergenic region YibP or B3613 SW:YIBP_ECOLI (P37690) (419 aa) fasta scores: E(): 1e-14, 31.218% id in 394 aa
NP_879452.1	Similar to Bartonella bacilliformis carboxy-terminal processing protease precursor CtpA SW:CTPA_BARBA (Q44879) (434 aa) fasta scores: E(): 8.3e-36, 44.545% id in 440 aa, and to Bartonella quintana carboxy-terminal protease CtpA TR:Q9ZF67 (EMBL:AF110497) (441 aa) fasta scores: E(): 1.5e-38, 44.622% id in 437 aa
NP_879453.1	Similar to Escherichia coli adenylyltransferase ThiF or B3992 SW:THIF_ECOLI (P30138) (251 aa) fasta scores: E(): 1.1e-41, 50.000% id in 252 aa, and to Pseudomonas aeruginosa molybdopterin biosynthesis MoeB protein or Pa4663 TR:Q9HVC9 (EMBL:AE004880) (252 aa) fasta scores: E(): 5.7e-48, 54.365% id in 252 aa
NP_879454.1	transposase for IS481 element
NP_879455.1	Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 6.5e-37, 36.196% id in 326 aa, and to Comamonas testosteroni Orf4 protein TR:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 3.9e-36, 35.831% id in 307 aa
NP_879456.1	Similar to Erwinia chrysanthemi pectin degradation repressor protein KdgR SW:KDGR_ERWCH (P37728) (305 aa) fasta scores: E(): 1.7e-11, 29.057% id in 265 aa, and to Pseudomonas aeruginosa probable transcriptional regulator Pa2010 TR:Q9I2A1 (EMBL:AE004627) (267 aa) fasta scores: E(): 2.3e-26, 35.178% id in 253 aa. Also similar to BP3482 (47.244% identity in 254 aa overlap)
NP_879457.1	Similar to Comamonas testosteroni Orf4 protein TR:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 1.7e-32, 38.782% id in 312 aa, and to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 5.6e-29, 32.399% id in 321 aa
NP_879458.1	Similar to Mycobacterium tuberculosis CDC1551 conserved hypothetical protein Mt3614 TR:AAK47972 (EMBL:AE007164) (278 aa) fasta scores: E(): 4.2e-15, 27.698% id in 278 aa, and to Agrobacterium tumefaciens Agr_c_2623p TR:AAK87214 (EMBL:AE008068) (291 aa) fasta scores: E(): 8.6e-11, 30.516% id in 213 aa
NP_879459.1	Similar to Caulobacter crescentus transcriptional regulator, TetR family Cc0992 TR:Q9A9I8 (EMBL:AE005777) (210 aa) fasta scores: E(): 1.8e-13, 34.503% id in 171 aa, and to Rhodococcus spNCIMB 9784. transcriptional repressor CampR TR:AAK50621 (EMBL:AF323755) (206 aa) fasta scores: E(): 2.3e-11, 25.000% id in 184 aa
NP_879460.1	Similar to Escherichia coli dihydrolipoamide dehydrogenase LpdA or Lpd or B0116 SW:DLDH_ECOLI (P00391) (473 aa) fasta scores: E(): 4.1e-94, 55.579% id in 466 aa, and to Salmonella enterica subspenterica serovar Typhimurium. dihydrolipoamide dehydrogenase Lpd TR:Q9ACP1 (EMBL:AJ297525) (475 aa) fasta scores: E(): 4.7e-94, 55.246% id in 467 aa
NP_879461.1	Similar to Thermotoga maritima branched chain amino acid ABC transporter ATP-binding protein Tm1139 TR:Q9X0M3 (EMBL:AE001771) (239 aa) fasta scores: E(): 4.2e-29, 46.186% id in 236 aa, and to Deinococcus radiodurans branched-chain amino acid ABC transporter ATP-binding protein Dr2118 TR:Q9RSK6 (EMBL:AE002047) (236 aa) fasta scores: E(): 8.1e-29, 43.644% id in 236 aa
NP_879462.1	Similar to Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivG or B3455 or Z4825 or Ecs4302 SW:LIVG_ECOLI (P22730) (255 aa) fasta scores: E(): 2.2e-23, 36.905% id in 252 aa, and to Deinococcus radiodurans branched-chain amino acid ABC tranpsorter, ATP binding protein Dra0261 TR:Q9RYP8 (EMBL:AE001863) (587 aa) fasta scores: E(): 6.1e-44, 34.028% id in 576 aa
NP_879463.1	Similar to Escherichia coli high-affinity branched-chain amino acid transport system permease LivH or B3457 SW:LIVH_ECOLI (P08340) (308 aa) fasta scores: E(): 8.7e-22, 32.895% id in 304 aa, and to Salmonella typhimurium high-affinity branched-chain amino acid transport system permease LivH or LivA SW:LIVH_SALTY (P30295) (308 aa) fasta scores: E(): 2.1e-22, 32.895% id in 304 aa
NP_879464.1	Similar to Escherichia coli leu/ile/val-binding protein precursor LivJ or B3460 SW:LIVJ_ECOLI (P02917) (367 aa) fasta scores: E(): 5e-13, 28.428% id in 299 aa, and to Rhizobium meliloti probable leu/ile/val-binding protein TR:CAC45495 (EMBL:AL591785) (368 aa) fasta scores: E(): 6.4e-15, 32.861% id in 353 aa
NP_879465.1	activates fatty acids by binding to coenzyme A
NP_879466.1	Similar to Pseudomonas putida FadfX TR:Q9AHX9 (EMBL:AF290950) (375 aa) fasta scores: E(): 8.8e-34, 33.425% id in 362 aa, and to Archaeoglobus fulgidus acyl-CoA dehydrogenase Af0964 TR:O29298 (EMBL:AE001038) (394 aa) fasta scores: E(): 5.4e-66, 44.810% id in 395 aa
NP_879467.1	Similar to Clostridium acetobutylicum 3-hydroxybutyryl-coa dehydratase Crt or Cac2712 SW:CRT_CLOAB (P52046) (261 aa) fasta scores: E(): 8.7e-33, 39.764% id in 254 aa, and to Clostridium thermosaccharolyticum crotonase Crt TR:P97087 (EMBL:Z92974) (259 aa) fasta scores: E(): 8.7e-33, 40.698% id in 258 aa
NP_879468.1	Similar to Zea mays pyruvate dehydrogenase E1 beta subunit isoform 2 Pdh2 TR:Q9ZQY2 (EMBL:AF069909) (374 aa) fasta scores: E(): 4.3e-56, 47.077% id in 325 aa, and to Rhizobium loti acetoin dehydrogenase Mll3628 TR:Q98FT4 (EMBL:AP003002) (332 aa) fasta scores: E(): 3.5e-60, 51.713% id in 321 aa
NP_879469.1	Similar to Clostridium magnum TPP-dependent acetoin dehydrogenase alpha-subunit TR:Q46142 (EMBL:L31844) (326 aa) fasta scores: E(): 8.2e-48, 43.631% id in 314 aa, and to Pseudomonas aeruginosa probable dehydrogenase e1 component Pa4150 TR:Q9HWN1 (EMBL:AE004831) (324 aa) fasta scores: E(): 3.1e-48, 45.541% id in 314 aa
NP_879470.1	Similar to Escherichia coli negative regulator of allantoin and glyoxylate utilization operons AllR or GlxA3 or B0506 or Z0660 or Ecs0567 SW:ALLR_ECOLI (P77734) (271 aa) fasta scores: E(): 1.7e-10, 27.237% id in 257 aa, and to Pseudomonas aeruginosa probable transcriptional regulator Pa1015 TR:Q9I4V8 (EMBL:AE004534) (266 aa) fasta scores: E(): 4.6e-31, 39.184% id in 245 aa
NP_879471.1	Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 5.4e-41, 39.577% id in 331 aa, and to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 7.1e-42, 42.368% id in 321 aa
NP_879472.1	Similar to Bacillus subtilis acyl-CoA dehydrogenase AcdA or Acd SW:ACDA_BACSU (P45867) (379 aa) fasta scores: E(): 1.1e-49, 40.849% id in 377 aa, and to Bacillus halodurans acyl-CoA dehydrogenase AcdA or Bh3798 TR:Q9K6D1 (EMBL:AP001520) (380 aa) fasta scores: E(): 5.8e-53, 41.270% id in 378 aa
NP_879473.1	Similar to Escherichia coli probable enoyl-CoA hydratase PaaG or B1394 SW:PAAG_ECOLI (P77467) (262 aa) fasta scores: E(): 5.2e-25, 33.846% id in 260 aa, and to Rhizobium meliloti  enoyl-CoA hydratase TR:CAC49952 (EMBL:AL603647) (263 aa) fasta scores: E(): 8.5e-28, 39.147% id in 258 aa
NP_879474.1	Similar to Rhodococcus spNCIMB 9784 non-specific lipid carrier-like protein CampC TR:AAK50624 (EMBL:AF323755) (408 aa) fasta scores: E(): 8.1e-37, 35.106% id in 376 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1016 TR:Q9I4V7 (EMBL:AE004534) (383 aa) fasta scores: E(): 2.1e-46, 41.425% id in 379 aa
NP_879475.1	Similar to Thermoplasma volcanium hypothetical protein Tvg0142586 TR:Q97CG7 (EMBL:AP000991) (135 aa) fasta scores: E(): 1.1e-07, 36.522% id in 115 aa, and to Archaeoglobus fulgidus conserved hypothetical protein Af0284 TR:O29957 (EMBL:AE001085) (165 aa) fasta scores: E(): 2.2e-06, 29.091% id in 110 aa
NP_879476.1	no significant database matches
NP_879477.1	Similar to Archaeoglobus fulgidus monoamine oxidase regulatory protein,  Af0198 TR:O30041 (EMBL:AE001092) (146 aa) fasta scores: E(): 6.9e-07, 44.444% id in 90 aa, and to Archaeoglobus fulgidus conserved hypothetical protein Af1124 TR:O29141 (EMBL:AE001026) (159 aa) fasta scores: E(): 1.6e-06, 28.182% id in 110 aa
NP_879478.1	Similar to Pseudomonas putida FadfX TR:Q9AHX9 (EMBL:AF290950) (375 aa) fasta scores: E(): 3.6e-38, 33.858% id in 381 aa, and to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase Pa2889 TR:Q9HZV8 (EMBL:AE004715) (386 aa) fasta scores: E(): 6.2e-86, 55.584% id in 385 aa
NP_879479.1	Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.5e-40, 40.000% id in 315 aa, and to Agrobacterium tumefaciens Agr_l_312p TR:AAK88723 (EMBL:AE008213) (329 aa) fasta scores: E(): 4.7e-39, 40.312% id in 320 aa
NP_879480.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3592 TR:Q9HY34 (EMBL:AE004779) (395 aa) fasta scores: E(): 1.9e-30, 35.567% id in 388 aa, and to Rhodococcus erythropolis  dehydratase/racemase TR:Q9AH11 (EMBL:AF323606) (400 aa) fasta scores: E(): 8.9e-30, 32.626% id in 377 aa
NP_879481.1	Similar to Escherichia coli transcriptional activator protein LysR or B2839 SW:LYSR_ECOLI (P03030) (311 aa) fasta scores: E(): 1.9e-27, 34.843% id in 287 aa, and to Pseudomonas aeruginosa probable transcriptional regulator Pa5085 TR:Q9HU98 (EMBL:AE004921) (318 aa) fasta scores: E(): 1e-25, 35.395% id in 291 aa
NP_879482.1	Similar to Thermotoga maritima dihydrodipicolinate synthase DapA or Tm1521 SW:DAPA_THEMA (Q9X1K9) (294 aa) fasta scores: E(): 8.1e-16, 28.400% id in 250 aa, and to Agrobacterium tumefaciens Agr_pat_671p TR:AAK90832 (EMBL:AE007915) (302 aa) fasta scores: E(): 6.3e-20, 32.056% id in 287 aa
NP_879483.1	transposase for IS481 element
NP_879484.1	transposase for IS481 element
NP_879485.1	Similar to Pyrococcus abyssi hypothetical 13.6 kDa protein Pab1062 TR:Q9UY93 (EMBL:AJ248288) (130 aa) fasta scores: E(): 4e-09, 30.328% id in 122 aa, and to Pyrococcus horikoshii hypothetical 14.0 kDa protein Ph0353 SW:Y353_PYRHO (O58091) (134 aa) fasta scores: E(): 2.1e-08, 31.405% id in 121 aa
NP_879486.1	Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.4e-43, 43.168% id in 322 aa, and to Agrobacterium tumefaciens Agr_l_312p TR:AAK88723 (EMBL:AE008213) (329 aa) fasta scores: E(): 5.1e-43, 41.667% id in 324 aa
NP_879487.1	Similar to Azospirillum brasilense galactose-binding protein regulator GbpR SW:GBPR_AZOBR (P52661) (342 aa) fasta scores: E(): 1.7e-23, 31.683% id in 303 aa, and to Pseudomonas aeruginosa probable transcriptional regulator Pa2206 TR:Q9I1R1 (EMBL:AE004647) (315 aa) fasta scores: E(): 4.2e-28, 32.468% id in 308 aa
NP_879488.1	component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent
NP_879489.1	Similar to Caulobacter crescentus acyl-CoA dehydrogenase family protein Cc1311 TR:Q9A8P2 (EMBL:AE005806) (401 aa) fasta scores: E(): 2.8e-46, 40.476% id in 378 aa, and to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase Pa0746 TR:Q9I5I3 (EMBL:AE004509) (387 aa) fasta scores: E(): 3.9e-26, 31.622% id in 370 aa
NP_879490.1	Similar to Caulobacter crescentus acyl-CoA dehydrogenase family protein Cc1310 TR:Q9A8P3 (EMBL:AE005806) (404 aa) fasta scores: E(): 2e-81, 50.495% id in 404 aa, and to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase Pa1022 TR:Q9I4V2 (EMBL:AE004534) (381 aa) fasta scores: E(): 2e-46, 41.582% id in 392 aa
NP_879491.1	Similar to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1.4e-36, 37.690% id in 329 aa, and to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 4.1e-35, 36.677% id in 319 aa
NP_879492.1	catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine
NP_879493.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa5391 TR:Q9HTH3 (EMBL:AE004951) (224 aa) fasta scores: E(): 1.9e-54, 68.304% id in 224 aa, and to Aeropyrum pernix hypothetical 32.5 kDa protein Ape1388 TR:Q9YC63 (EMBL:AP000061) (301 aa) fasta scores: E(): 2.2e-18, 42.771% id in 166 aa
NP_879494.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa5392 TR:Q9HTH2 (EMBL:AE004951) (140 aa) fasta scores: E(): 5.7e-50, 92.086% id in 139 aa, and to Rhizobium meliloti hypothetical 14.1 kDa protein Sma2289 TR:AAK65890 (EMBL:AE007308) (130 aa) fasta scores: E(): 2.3e-07, 33.333% id in 123 aa
NP_879495.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa5393 TR:Q9HTH1 (EMBL:AE004951) (450 aa) fasta scores: E(): 2.8e-129, 75.962% id in 416 aa, and to Synechocystis sp hypothetical 46.6 kDa protein Slr0801 TR:Q55951 (EMBL:D64005) (416 aa) fasta scores: E(): 1.8e-54, 40.594% id in 404 aa
NP_879496.1	Similar to Escherichia coli protein YhdH or B3253 SW:YHDH_ECOLI (P26646) (324 aa) fasta scores: E(): 3.9e-65, 57.500% id in 320 aa, and to Rhizobium loti dehydrogenase, zinc-binding alcohol dehydrogenase, NADPH quinone oxidoreductase, oxidoreductase Mlr3212 TR:Q98GR0 (EMBL:AP003001) (329 aa) fasta scores: E(): 8.3e-71, 59.752% id in 323 aa
NP_879497.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa0218 TR:Q9I6S0 (EMBL:AE004459) (306 aa) fasta scores: E(): 9.4e-28, 32.886% id in 298 aa, and to Rhizobium loti transcriptional regulator Mll7443 TR:Q986A7 (EMBL:AP003011) (303 aa) fasta scores: E(): 2.3e-21, 29.097% id in 299 aa
NP_879498.1	Similar to Entamoeba histolytica acetyl-CoA synthetase TR:Q9NAT4 (EMBL:AF286346) (713 aa) fasta scores: E(): 7.1e-57, 32.460% id in 687 aa, and to Pseudomonas aeruginosa pimeloyl-CoA synthetase pa1017 TR:Q9I4V6 (EMBL:AE004534) (715 aa) fasta scores: E(): 5.4e-63, 32.345% id in 708 aa
NP_879499.1	Similar to Clostridium acetobutylicum 3-hydroxybutyryl-CoA dehydratase Crt or Cac2712 SW:CRT_CLOAB (P52046) (261 aa) fasta scores: E(): 8.8e-24, 33.725% id in 255 aa, and to Halobacterium sp enoyl-CoA hydratase Fad2 or Vng0428G TR:Q9HS32 (EMBL:AE004998) (256 aa) fasta scores: E(): 8.7e-24, 35.878% id in 262 aa
NP_879500.1	Similar to Streptomyces coelicolor  lipoprotein Scbac1a6.20C TR:Q9ADG7 (EMBL:AL589708) (367 aa) fasta scores: E(): 0.0011, 26.549% id in 226 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3449 TR:Q9HYF7 (EMBL:AE004765) (333 aa) fasta scores: E(): 0.006, 24.473% id in 237 aa
NP_879501.1	Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.9e-44, 39.752% id in 322 aa, and to Agrobacterium tumefaciens Agr_l_312p TR:AAK88723 (EMBL:AE008213) (329 aa) fasta scores: E(): 1.4e-44, 40.426% id in 329 aa
NP_879502.1	Similar to Saccharopolyspora erythraea thymidine diphosphoglucose 4,6-dehydratase Gdh TR:Q54116 (EMBL:L37354) (329 aa) fasta scores: E(): 2.7e-13, 26.524% id in 328 aa, and to Streptomyces tenebrarius AprE TR:Q9F5R6 (EMBL:AF306787) (332 aa) fasta scores: E(): 3.6e-13, 29.429% id in 333 aa
NP_879503.1	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
NP_879504.1	Similar to Escherichia coli hypothetical transcriptional regulator YbaO or B0447 SW:YBAO_ECOLI (P54986) (152 aa) fasta scores: E(): 2.4e-13, 33.333% id in 150 aa, and to Haemophilus influenzae hypothetical transcriptional regulator Hi0224 SW:Y224_HAEIN (P44580) (168 aa) fasta scores: E(): 1.6e-17, 37.162% id in 148 aa
NP_879505.1	Similar to Cucurbita maxima 3-ketoacyl-CoA thiolase precursor TR:P93112 (EMBL:D70895) (461 aa) fasta scores: E(): 1.1e-50, 42.569% id in 397 aa, and to Deinococcus radiodurans acetyl-CoA acetyltransferase Dr1428 TR:Q9RUF8 (EMBL:AE001987) (402 aa) fasta scores: E(): 4.6e-94, 65.140% id in 393 aa
NP_879506.1	Similar to Cavia porcellus peroxisomal bifunctional enzyme EhhadH SW:ECHP_CAVPO (P55100) (725 aa) fasta scores: E(): 1.9e-65, 41.018% id in 707 aa, and to Rhizobium loti enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase Nll4199 TR:Q98EK7 (EMBL:AP003003) (689 aa) fasta scores: E(): 6.5e-103, 46.802% id in 688 aa
NP_879507.1	Similar to Escherichia coli AidB protein B4187 SW:AIDB_ECOLI (P33224) (541 aa) fasta scores: E(): 1.4e-32, 30.983% id in 468 aa, and to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase Pa3593 TR:Q9HY33 (EMBL:AE004779) (575 aa) fasta scores: E(): 7.1e-91, 47.120% id in 573 aa
NP_879508.1	Similar to Variovorax paradoxus 2,4-diphenoxyacetic acid gene cluster TR:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 1.3e-29, 32.288% id in 319 aa, and to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 7.6e-31, 32.110% id in 327 aa
NP_879509.1	Similar to Pseudomonas mendocina pimeloyl-CoA synthetase TR:Q9ZER2 (EMBL:AJ012480) (711 aa) fasta scores: E(): 2.2e-99, 40.979% id in 715 aa, and to Entamoeba histolytica acetyl-CoA synthetase TR:Q9NAT4 (EMBL:AF286346) (713 aa) fasta scores: E(): 1.1e-55, 31.549% id in 710 aa
NP_879510.1	Catalyzes the first step in the citric acid cycle. Oxaloacetate and acetyl-CoA bind to citrate synthase, which then catalyzes the reaction which joins the two compounds together
NP_879511.1	Similar to Salmonella typhimurium acetate operon repressor IclR SW:ICLR_SALTY (P17430) (274 aa) fasta scores: E(): 9.3e-08, 25.410% id in 244 aa, and to Caulobacter crescentus transcriptional regulator,  Cc1811 TR:Q9A7B3 (EMBL:AE005855) (257 aa) fasta scores: E(): 3.5e-17, 29.555% id in 247 aa
NP_879512.1	Similar to Rhodobacter sphaeroides biotin sulfoxide reductase SW:BISC_RHOSH (P54934) (744 aa) fasta scores: E(): 9.8e-113, 42.457% id in 749 aa, and to Mycobacterium tuberculosis CDC1551 molybdopterin oxidoreductase Mt1487 TR:AAK45750 (EMBL:AE007018) (766 aa) fasta scores: E(): 6.1e-146, 49.547% id in 773 aa
NP_879513.1	transposase for IS481 element
NP_879514.1	catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins
NP_879515.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
NP_879516.1	Similar to Escherichia coli HemK protein or B1212 SW:HEMK_ECOLI (P37186) (277 aa) fasta scores: E(): 1.2e-32, 42.578% id in 256 aa, and to Neisseria meningitidis HemK protein or Nma0369 TR:Q9JWH6 (EMBL:AL162753) (273 aa) fasta scores: E(): 7.5e-41, 48.846% id in 260 aa
NP_879517.1	Similar to Neisseria meningitidis hypothetical protein Nma0984 or Nmb0773 TR:Q9JR73 (EMBL:AL162754) (103 aa) fasta scores: E(): 2.8e-24, 66.337% id in 101 aa, and to Rhizobium meliloti conserved hypothetical protein Smc00538 TR:CAC46360 (EMBL:AL591788) (111 aa) fasta scores: E(): 9.6e-21, 57.009% id in 107 aa
NP_879518.1	catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate
NP_879519.1	Similar to Variovorax paradoxus 2,4-diphenoxyacetic acid gene cluster TR:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 1.4e-38, 36.577% id in 298 aa, and to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 2.3e-42, 38.769% id in 325 aa
NP_879520.1	Similar to Burkholderia cepacia 4,5-dihydroxyphthalate decarboxylase OphC TR:Q9ZFR0 (EMBL:AF095748) (330 aa) fasta scores: E(): 6.3e-68, 49.848% id in 329 aa, and to Comamonas testosteroni 4,5-dihydroxyphthalate decarboxylase PhtD SW:PHTD_COMTE (Q59727) (330 aa) fasta scores: E(): 3.6e-65, 48.632% id in 329 aa
NP_879521.1	Similar to Pseudomonas thermocarboxydovorans carbon monoxide oxygenase [cytochrome b-561], small chain Cut C TR:Q52589 (EMBL:X77931) (163 aa) fasta scores: E(): 1.1e-31, 57.051% id in 156 aa, and to Sulfolobus solfataricus carbon monoxide dehydrogenase, small chain amino-end fragment CutC-2 TR:Q97VI6 (EMBL:AE006859) (163 aa) fasta scores: E(): 5.3e-32, 54.658% id in 161 aa
NP_879522.1	Similar to Pseudomonas putida quinoline 2-oxidoreductase, large chain QorL TR:P72224 (EMBL:X98131) (788 aa) fasta scores: E(): 7.5e-52, 36.189% id in 782 aa, and to Arthrobacter nicotinovorans ketone dehydrogenase large subunit KdhL TR:CAC37487 (EMBL:AJ306904) (794 aa) fasta scores: E(): 9.9e-82, 35.379% id in 766 aa
NP_879523.1	transposase for IS481 element
NP_879524.1	Similar to Pseudomonas aeruginosa rare lipoprotein A precursor RlpA or Pa4000 TR:Q9X6V6 (EMBL:AF147448) (342 aa) fasta scores: E(): 8.6e-23, 39.869% id in 306 aa, and to Vibrio cholerae rare lipoprotein A,  Vc0948 TR:Q9KTF4 (EMBL:AE004177) (263 aa) fasta scores: E(): 3.4e-23, 37.079% id in 267 aa
NP_879525.1	Similar to Neisseria meningitidis hypothetical protein Nmb0738 TR:Q9K080 (EMBL:AE002428) (284 aa) fasta scores: E(): 6e-48, 46.643% id in 283 aa, and to Vibrio cholerae hypothetical protein Vc2532 TR:Q9KP47 (EMBL:AE004322) (286 aa) fasta scores: E(): 1.9e-42, 43.554% id in 287 aa
NP_879526.1	Similar to Pectobacterium cypripedii cytochrome C precursor TR:O34215 (EMBL:U97665) (441 aa) fasta scores: E(): 2.7e-35, 41.106% id in 416 aa, and to Acetobacter pasteurianus cytochrome C subunit of alcohol dehydrogenase TR:Q57536 (EMBL:D13893) (472 aa) fasta scores: E(): 2.7e-34, 40.146% id in 411 aa
NP_879527.1	catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system
NP_879528.1	Similar to Escherichia coli nitrogen regulatory IIA protein PtsN or RpoP or B3204 SW:PTSN_ECOLI (P31222) (163 aa) fasta scores: E(): 6.2e-13, 40.000% id in 120 aa, and to Alcaligenes eutrophus hypothetical 16.5 kDa protein TR:Q9EX66 (EMBL:AJ131690) (151 aa) fasta scores: E(): 1.6e-37, 65.986% id in 147 aa
NP_879529.1	Similar to Rhizobium leguminosarum ABC-type permease homolog TR:Q52785 (EMBL:U23471) (258 aa) fasta scores: E(): 3.3e-47, 60.938% id in 256 aa, and to Alcaligenes eutrophus hypothetical 28.7 kDa protein TR:Q9EX70 (EMBL:AJ131690) (263 aa) fasta scores: E(): 1.6e-57, 69.811% id in 265 aa
NP_879530.1	Similar to Escherichia coli protein YhbN precursor YhbN or B3200 or Z4563 or Ecs4079 SW:YHBN_ECOLI (P38685) (185 aa) fasta scores: E(): 0.19, 28.877% id in 187 aa, and to Alcaligenes eutrophus hypothetical 16.9 kDa protein TR:Q9EX71 (EMBL:AJ131690) (155 aa) fasta scores: E(): 2.3e-09, 37.984% id in 129 aa
NP_879531.1	Similar to Neisseria meningitidis  periplasmic hypothetical protein Nma2133 TR:Q9JSU4 (EMBL:AL162758) (193 aa) fasta scores: E(): 0.00062, 23.711% id in 194 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4459 TR:Q9HVV8 (EMBL:AE004860) (190 aa) fasta scores: E(): 0.04, 22.989% id in 174 aa
NP_879532.1	Similar to Neisseria meningitidis hypothetical protein Nma2134 TR:Q9JSU3 (EMBL:AL162758) (178 aa) fasta scores: E(): 3.7e-25, 44.706% id in 170 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4458 TR:Q9HVV9 (EMBL:AE004860) (179 aa) fasta scores: E(): 4.9e-25, 48.428% id in 159 aa
NP_879533.1	Similar to Escherichia coli GutQ protein GutQ or SrlQ or B2708 SW:GUTQ_ECOLI (P17115) (321 aa) fasta scores: E(): 2e-49, 48.438% id in 320 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4457 TR:Q9HVW0 (EMBL:AE004860) (326 aa) fasta scores: E(): 6.5e-60, 56.190% id in 315 aa
NP_879534.1	non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis
NP_879535.1	transposase for IS481 element
NP_879536.1	Similar to Roseateles depolymerans Orf428 protein TR:Q9F206 (EMBL:AB028938) (428 aa) fasta scores: E(): 7.6e-89, 58.080% id in 427 aa, and to Xylella fastidiosa hypothetical protein Xf0042 TR:Q9PHA2 (EMBL:AE003858) (420 aa) fasta scores: E(): 4.2e-44, 53.682% id in 421 aa
NP_879537.1	Similar to Streptomyces coelicolor hypothetical 10.8 kDa protein Sce22.04 TR:Q9KYV8 (EMBL:AL355832) (110 aa) fasta scores: E(): 2.8e-07, 34.653% id in 101 aa, and to Mycobacterium leprae hypothetical ser-rich C-terminus protein Ml0180 TR:Q9CD66 (EMBL:AL583917) (99 aa) fasta scores: E(): 9.8e-05, 32.673% id in 101 aa
NP_879538.1	Similar to Neisseria meningitidis  integral membrane protein Nma2020 TR:Q9JT22 (EMBL:AL162757) (245 aa) fasta scores: E(): 1.3e-33, 47.143% id in 210 aa, and to Rhizobium meliloti hypothetical transmembrane protein Smc00229 TR:CAC46233 (EMBL:AL591788) (230 aa) fasta scores: E(): 3.8e-26, 41.627% id in 209 aa
NP_879539.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
NP_879540.1	Similar to Escherichia coli hypothetical protein YbhP or B0790 or Z1009 or Ecs0868 SW:YBHP_ECOLI (P75772) (253 aa) fasta scores: E(): 2.3e-20, 36.426% id in 291 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2156 TR:Q9I1V9 (EMBL:AE004642) (245 aa) fasta scores: E(): 4.6e-20, 37.457% id in 291 aa. Also similar to BP1340, 37.801% identity (46.610% ungapped) in 291 aa overlap.
NP_879541.1	Similar to Escherichia coli cardiolipin synthetase Cls or Nov or B1249 SW:CLS_ECOLI (P31071) (486 aa) fasta scores: E(): 2.8e-13, 28.378% id in 370 aa, and to Escherichia coli hypothetical protein YbhO or B0789 or Z1008 or Ecs0867 SW:YBHO_ECOLI (P75771) (413 aa) fasta scores: E(): 9.9e-28, 38.265% id in 392 aa
NP_879542.1	Similar to Vibrio cholerae hypothetical protein Vca0090 TR:Q9KN75 (EMBL:AE004352) (297 aa) fasta scores: E(): 9.3e-45, 47.887% id in 284 aa, and to Rhizobium loti Mlr1585 protein TR:Q98K88 (EMBL:AP002997) (305 aa) fasta scores: E(): 4.8e-22, 34.343% id in 297 aa
NP_879543.1	Similar to Streptomyces hygroscopicus carboxyvinyl-carboxyphosphonate phosphorylmutase BcpA SW:CPPM_STRHY (P11435) (294 aa) fasta scores: E(): 2.5e-36, 39.789% id in 284 aa, and to Sulfolobus solfataricus carboxyphosphonoenolpyruvate phosphonomutase PrpB TR:Q97VN2 (EMBL:AE006855) (285 aa) fasta scores: E(): 1e-39, 46.099% id in 282 aa
NP_879544.1	Similar to Thermoplasma volcanium Tvg1306680 protein TR:Q978Z7 (EMBL:AP000996) (64 aa) fasta scores: E(): 7.1, 33.333% id in 48 aa, and to Agrobacterium tumefaciens Agr_c_4413p TR:AAK88168 (EMBL:AE008157) (121 aa) fasta scores: E(): 1.3e-13, 59.375% id in 64 aa
NP_879545.1	Similar to Bilophila wadsworthia taurine:pyruvate aminotransferase TR:Q9APM5 (EMBL:AF269146) (456 aa) fasta scores: E(): 9.3e-99, 54.000% id in 450 aa, and to Bacillus subtilis probable aminotransferase YhxA SW:YHXA_BACSU (P33189) (450 aa) fasta scores: E(): 7.4e-62, 37.418% id in 457 aa
NP_879546.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
NP_879547.1	Similar to Rhizobium meliloti probable ABC transporter ATP-binding protein Sma1434 TR:AAK65441 (EMBL:AE007265) (550 aa) fasta scores: E(): 1e-76, 46.125% id in 542 aa, and to Agrobacterium tumefaciens Agr_l_3504p TR:AAK90329 (EMBL:AE008378) (575 aa) fasta scores: E(): 7.1e-84, 48.780% id in 533 aa
NP_879548.1	Similar to Rhizobium sp probable peptide ABC transporter permease Y4tQ SW:Y4TQ_RHISN (Q53192) (291 aa) fasta scores: E(): 1.4e-52, 53.307% id in 257 aa, and to Rhizobium loti ABC transporter permease mlr6290 TR:Q989T2 (EMBL:AP003008) (280 aa) fasta scores: E(): 5.7e-46, 47.547% id in 265 aa. Also similar to several B. pertussis CDSs such as BP3161 (57.348% identity in 279 aa overlap), BP1825 (57.977% identity in 257 aa overlap), BP3459 (55.725% identity in 262 aa overlap), P2592 (40.304% identity in 263 aa overlap)
NP_879549.1	Similar to Rhizobium sp probable peptide ABC transporter permease Y4tP SW:Y4TP_RHISN (Q53191) (313 aa) fasta scores: E(): 3.2e-65, 54.839% id in 310 aa, and to Rhizobium loti ABC transporter permease Mlr6289 TR:Q989T3 (EMBL:AP003008) (314 aa) fasta scores: E(): 5e-52, 47.284% id in 313 aa. Also similar to several B. pertussis CDSs such as BP3160 (58.147% identity in 313 aa overlap), BP3458 (54.633% identity in 313 aa overlap), BP1824 (53.922% identity in 306 aa overlap), BP2395 (44.268% identity in 314 aa overlap), and BP2691 (40.256% identity in 313 aa overlap)
NP_879550.1	Similar to Rhizobium sp probable peptide ABC transporter periplasmic binding protein Y4tO precursor SW:Y4TO_RHISN (P55669) (531 aa) fasta scores: E(): 5.6e-64, 37.786% id in 524 aa, and to Bradyrhizobium japonicum  ABC transporter TR:Q9RH65 (EMBL:AF065159) (516 aa) fasta scores: E(): 1.1e-62, 37.670% id in 515 aa
NP_879551.1	Similar to Rhodococcus opacus  regulator of catechol degradative operon CatR TR:O33539 (EMBL:X99622) (256 aa) fasta scores: E(): 1.1e-17, 33.468% id in 248 aa, and to Alcaligenes eutrophus hypothetical 30.8 kDa protein TR:Q9L789 (EMBL:AF225972) (279 aa) fasta scores: E(): 3.4e-22, 33.871% id in 248 aa
NP_879552.1	Similar to Streptomyces roseosporus TetR homologue WhiR TR:P72569 (EMBL:U58281) (179 aa) fasta scores: E(): 0.00038, 28.814% id in 118 aa, and to Pseudomonas aeruginosa probable transcriptional regulator Pa1283 TR:Q9I461 (EMBL:AE004558) (186 aa) fasta scores: E(): 8.1e-17, 32.973% id in 185 aa. IS481 inserted immediately upstream of the start codon. It is not clear whether this insertion has any effect on the expression of this gene
NP_879553.1	transposase for IS481 element
NP_879554.1	Similar to Vibrio alginolyticus carboxynorspermidine decarboxylase NspC TR:Q56575 (EMBL:D31783) (377 aa) fasta scores: E(): 1.4e-71, 52.291% id in 371 aa, and to Rhizobium meliloti carboxynorspermidine decarboxylase TR:CAC49950 (EMBL:AL603647) (365 aa) fasta scores: E(): 6.7e-103, 69.041% id in 365 aa
NP_879555.1	Similar to Rhizobium meliloti conserved hypothetical protein Smb21630 TR:CAC49949 (EMBL:AL603647) (413 aa) fasta scores: E(): 2.6e-117, 67.317% id in 410 aa, and to Agrobacterium tumefaciens Agr_l_1365p TR:AAK89265 (EMBL:AE008267) (412 aa) fasta scores: E(): 4.7e-117, 67.317% id in 410 aa
NP_879556.1	transposase for IS481 element
NP_879558.1	Similar to Xylella fastidiosa hypothetical protein Xf1840 TR:Q9PCE1 (EMBL:AE004005) (237 aa) fasta scores: E(): 4e-29, 47.486% id in 179 aa, and to Zymomonas mobilis hypothetical 22.3 kDa protein zm10orf9 TR:Q9XBR4 (EMBL:AF157493) (204 aa) fasta scores: E(): 1.4e-18, 34.807% id in 181 aa
NP_879559.1	Similar to Escherichia coli ferrichrome-iron receptor precursor FhuA or TonA or B0150 SW:FHUA_ECOLI (P06971) (747 aa) fasta scores: E(): 7.8e-38, 40.000% id in 725 aa, and to Pseudomonas aeruginosa probable hydroxamate-type ferrisiderophore receptor Pa0470 TR:Q9I648 (EMBL:AE004484) (802 aa) fasta scores: E(): 1.4e-103, 40.000% id in 815 aa
NP_879560.1	Similar to Bordetella bronchiseptica  inner membrane sensor BupR TR:Q9L429 (EMBL:AJ251793) (344 aa) fasta scores: E(): 7.6e-19, 33.025% id in 324 aa, and to Pseudomonas aeruginosa probable transmembrane sensor Pa2388 TR:Q9I192 (EMBL:AE004665) (331 aa) fasta scores: E(): 3.9e-47, 44.377% id in 329 aa
NP_879561.1	transposase for IS481 element
NP_879562.1	no significant database matches
NP_879563.1	Similar to Bacteriophage 434 repressor protein CI SW:RPC1_BP434 (P16117) (94 aa) fasta scores: E(): 1.2, 35.088% id in 57 aa, and to Bacillus subtilis hypothetical 15.6 kDa protein TR:O52855 (EMBL:U09819) (139 aa) fasta scores: E(): 0.38, 33.333% id in 69 aa. It's possible that the upstream IS481 element has inserted within the N-terminus of this CDS. Also similar to BP0744, 65.972% identity (70.370% ungapped) in 144 aa overlap.
NP_879564.1	Similar to Bacteriophage 434 repressor protein CI SW:RPC1_BP434 (P16117) (94 aa) fasta scores: E(): 0.021, 37.097% id in 62 aa, and to Bacillus subtilis hypothetical transcriptional regulator YqaE yqaE SW:YQAE_BACSU (P45902) (116 aa) fasta scores: E(): 0.058, 27.083% id in 96 aa. Also similar to BP0741, 65.972% identity (70.370% ungapped) in 144 aa overlap.
NP_879565.1	Similar to Neisseria cinerea BasR TR:Q9F9Y4 (EMBL:AF139614) (222 aa) fasta scores: E(): 0.17, 28.729% id in 181 aa, and to Bordetella pertussis transcriptional regulatory protein,  BasR TR:Q9S3M3 (EMBL:AJ132741) (223 aa) fasta scores: E(): 0.0027, 28.319% id in 226 aa
NP_879566.2	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
NP_879567.1	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication
NP_879568.1	involved in the peptidyltransferase reaction during translation
NP_879569.1	Similar to Escherichia coli 50S ribosomal protein L21 RplU or B3186 or Z4549 or Ecs4065 SW:RL21_ECOLI (P02422) (103 aa) fasta scores: E(): 4.8e-18, 47.573% id in 103 aa, and to Burkholderia pseudomallei 50S ribosomal protein L21 RplU TR:Q9FD29 (EMBL:AF292383) (103 aa) fasta scores: E(): 1.4e-29, 80.583% id in 103 aa
NP_879570.1	Similar to Streptomyces coelicolor hypothetical 41.1 kDa protein Scf41.20C TR:Q9RJU9 (EMBL:AL117387) (390 aa) fasta scores: E(): 2.9e-72, 54.856% id in 381 aa, and to Agrobacterium tumefaciens Agr_c_4970p TR:AAK88456 (EMBL:AE008188) (386 aa) fasta scores: E(): 7e-73, 53.457% id in 376 aa
NP_879571.1	Similar to Escherichia coli octaprenyl-diphosphate synthase IspB or Cel or B3187 SW:ISPB_ECOLI (P19641) (323 aa) fasta scores: E(): 1.2e-63, 53.560% id in 323 aa, and to Vibrio cholerae octaprenyl-diphosphate synthase Vc0434 TR:Q9KUT1 (EMBL:AE004131) (348 aa) fasta scores: E(): 3.1e-63, 53.870% id in 323 aa
NP_879572.1	Similar to Escherichia coli transcriptional activator protein LysR or B2839 SW:LYSR_ECOLI (P03030) (311 aa) fasta scores: E(): 4.6e-23, 34.507% id in 284 aa, and to Agrobacterium tumefaciens regulatory protein NocR SW:NOCR_AGRT5 (Q00678) (300 aa) fasta scores: E(): 5.3e-22, 33.333% id in 285 aa
NP_879573.1	Similar to Pseudomonas sp hydantoin utilization protein A HyuA SW:HYUA_PSESN (Q01262) (690 aa) fasta scores: E(): 2.8e-78, 35.044% id in 682 aa, and to Rhizobium loti hydantoin utilization protein A Mlr7024 TR:Q987J7 (EMBL:AP003010) (692 aa) fasta scores: E(): 2.1e-118, 47.415% id in 677 aa
NP_879574.1	Similar to Pseudomonas sp hydantoin utilization protein B HyuB SW:HYUB_PSESN (Q01263) (592 aa) fasta scores: E(): 1.7e-52, 31.134% id in 591 aa, and to Rhizobium loti hydantoin utilization protein B Mlr7025 TR:Q987J6 (EMBL:AP003010) (661 aa) fasta scores: E(): 4.6e-142, 55.807% id in 663 aa. Also similar to BP0821 (58.133% identity in 664 aa overlap)
NP_879575.1	Similar to Proteus vulgaris L-amino acid deaminase Lad TR:Q9LCB2 (EMBL:AB030003) (471 aa) fasta scores: E(): 9.2e-29, 31.628% id in 430 aa, and to Proteus mirabilis amino acid deaminase Aad TR:Q51890 (EMBL:U35383) (473 aa) fasta scores: E(): 7e-29, 28.638% id in 426 aa
NP_879576.1	Similar to Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD or B2661 SW:GABD_ECOLI (P25526) (482 aa) fasta scores: E(): 4.7e-99, 52.664% id in 488 aa, and to Agrobacterium radiobacter AttK TR:Q9WWD5 (EMBL:U59485) (484 aa) fasta scores: E(): 4.7e-106, 57.819% id in 486 aa
NP_879577.1	Identical to the previously sequenced Bordetella pertussis cyclolysin-activating lysine-acyltransferase CyaC SW:CYAC_BORPE (Q45359) (185 aa) fasta scores: E(): 2.1e-78, 99.459% id in 185 aa, and to Escherichia coli hemolysin-activating lysine-acyltransferase HlyC SW:HLYC_ECOLI (P06736) (170 aa) fasta scores: E(): 1.5e-24, 40.698% id in 172 aa
NP_879578.1	Identical to the previously sequenced Bordetella pertussis bifunctional hemolysin-adenylate cyclase precursor Cya or CyaA SW:CYAA_BORPE (P15318) (1706 aa) fasta scores: E(): 0, 99.941% id in 1706 aa, and to Bordetella parapertussis bifunctional hemolysin-adenylate cyclase precursor CyaA TR:Q9L469 (EMBL:AJ249835) (1706 aa) fasta scores: E(): 0, 97.714% id in 1706 aa
NP_879579.1	Identical to the previously sequenced Bordetella pertussis cyclolysin secretion ATP-binding protein CyaB SW:CYAB_BORPE (P18770) (712 aa) fasta scores: E(): 0, 97.199% id in 714 aa, and to Escherichia coli hemolysin secretion ATP-binding protein, chromosomal HlyB SW:HLY2_ECOLI (P10089) (707 aa) fasta scores: E(): 1.6e-133, 52.841% id in 704 aa
NP_879580.1	Identical to the previously sequenced Bordetella pertussis CyaD protein cyaD SW:CYAD_BORPE (P11091) (440 aa) fasta scores: E(): 6.9e-151, 99.318% id in 440 aa
NP_879581.1	Identical to the previously sequenced Bordetella pertussis protein CyaE precursor CyaE SW:CYAE_BORPE (P11092) (474 aa) fasta scores: E(): 2.3e-165, 100.000% id in 474 aa
NP_879582.1	Identical to the previously sequenced Bordetella pertussis unknown Orf CyaX TR:Q45360 (EMBL:X14199) (285 aa) fasta scores: E(): 1.6e-99, 93.411% id in 258 aa, and similar to Escherichia coli transcriptional activator protein IlvY or B3773 SW:ILVY_ECOLI (P05827) (297 aa) fasta scores: E(): 1.3e-09, 26.733% id in 303 aa
NP_879583.1	Similar to Escherichia coli amino acid ABC transporter binding protein YbeJ precursor YbeJ or B0655 SW:YBEJ_ECOLI (P37902) (302 aa) fasta scores: E(): 2.3e-50, 47.038% id in 287 aa, and to Pseudomonas aeruginosa probable binding protein component of ABC transporter Pa1342 TR:Q9I402 (EMBL:AE004563) (302 aa) fasta scores: E(): 2.5e-52, 47.797% id in 295 aa. Also similar to BP0057, 51.325% identity (52.013% ungapped) in 302 aa overlap.
NP_879584.1	Similar to Escherichia coli glutamate/aspartate transport system permease GltK or B0653 or Z0803 or Ecs0692 SW:GLTK_ECOLI (P41075) (224 aa) fasta scores: E(): 6.2e-33, 48.214% id in 224 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter Pa1340 TR:Q9I404 (EMBL:AE004563) (222 aa) fasta scores: E(): 3e-32, 45.701% id in 221 aa. Also similar to BP0055, 56.696% identity (56.696% ungapped) in 224 aa overlap.
NP_879585.1	Similar to Escherichia coli glutamate/aspartate transport ATP-binding protein GltL or B0652 or Z0802 or Ecs0691 SW:GLTL_ECOLI (P41076) (241 aa) fasta scores: E(): 5.2e-51, 65.000% id in 240 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter Pa1339 TR:Q9I405 (EMBL:AE004563) (244 aa) fasta scores: E(): 5.5e-57, 69.262% id in 244 aa. Similar to several B. pertussis CDSs: BP1181, P3828, BP1534, BP1855, BP1575, BP1362, P0054, and BP1510.
NP_879586.1	Similar to Staphylococcus aureus D-alanine aminotransferase TR:Q9KWZ6 (EMBL:Y14816) (282 aa) fasta scores: E(): 4.4e-32, 39.130% id in 276 aa, and to Brucella suis hypothetical 32.0 kDa protein TR:CAC67779 (EMBL:AJ305234) (289 aa) fasta scores: E(): 1.5e-47, 48.387% id in 279 aa
NP_879587.1	Similar to Rhizobium meliloti conserved hypothetical protein Smb20087 TR:CAC48487 (EMBL:AL603642) (201 aa) fasta scores: E(): 0.00043, 27.807% id in 187 aa, and to Rhizobium loti Mll2445 protein Mll2445 TR:Q98ID9 (EMBL:AP002999) (200 aa) fasta scores: E(): 9e-06, 28.495% id in 186 aa
NP_879588.1	Similar to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 3e-27, 34.727% id in 311 aa, and to Alcaligenes eutrophus hypothetical 35.6 kDa protein in gbd 5'region precursor SW:YGB7_ALCEU (Q44018) (327 aa) fasta scores: E(): 3.9e-30, 37.294% id in 303 aa
NP_879589.1	catalyzes the conversion of 3-hydroxyacyl-CoA to 3-oxyacyl-CoA
NP_879590.1	catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; catalytic
NP_879591.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa5525 TR:Q9HT48 (EMBL:AE004965) (246 aa) fasta scores: E(): 8.4e-20, 37.069% id in 232 aa, and to Rhizobium loti probable transcriptional regulator Mlr1038 TR:Q98LF9 (EMBL:AP002996) (226 aa) fasta scores: E(): 1e-19, 34.483% id in 203 aa
NP_879592.1	Similar to the C-terminal region of Serratia marcescens extracellular serine protease precursor SW:PRTS_SERMA (P09489) (1045 aa) fasta scores: E(): 1.2e-19, 30.435% id in 276 aa, and to Rhizobium loti serine proteinase Mlr1935 TR:Q98JH8 (EMBL:AP002998) (1213 aa) fasta scores: E(): 1.9e-29, 35.275% id in 309 aa. Also similar to the C-terminal regions of BP1661 (43.344% identity in 323 aa overlap) and BP1110 (42.722% identity in 316 aa overlap)
NP_879593.1	Similar to Chelatobacter heintzii nta operon transcriptional regulator NtaR or NmoR SW:NTRA_CHEHE (P54988) (210 aa) fasta scores: E(): 5.8e-21, 40.476% id in 210 aa, and to EDTA-degrading bacterium BNC1 EmoR TR:Q9F9T1 (EMBL:AF176664) (207 aa) fasta scores: E(): 7.5e-20, 37.255% id in 204 aa
NP_879594.1	Similar to Rhodopseudomonas palustris NADPH:quinone oxidoreductase BadC TR:O07459 (EMBL:U75363) (339 aa) fasta scores: E(): 5.9e-22, 34.393% id in 346 aa, and to Halobacterium sp alcohol dehydrogenase Adh4 or Vng1821G TR:Q9HP38 (EMBL:AE005083) (347 aa) fasta scores: E(): 5.3e-29, 43.875% id in 351 aa
NP_879595.1	Similar to Amycolatopsis spHR167 feruloyl-CoA synthetase Fcs TR:Q9EY88 (EMBL:AJ290449) (491 aa) fasta scores: E(): 2.9e-35, 33.758% id in 471 aa, and to Rhizobium loti probable acid-CoA ligase mlr1843 TR:Q98JP7 (EMBL:AP002998) (495 aa) fasta scores: E(): 1.3e-35, 31.911% id in 492 aa
NP_879596.1	Weakly similar to Vibrio cholerae hypothetical protein Vca0936 TR:Q9KL13 (EMBL:AE004420) (312 aa) fasta scores: E(): 0.077, 25.258% id in 194 aa. Similar to BP2869, 43.785% identity (43.909% ungapped) in 354 aa overlap.
NP_879597.1	Similar to Pasteurella multocida hypothetical protein Pm1265 TR:Q9CLG9 (EMBL:AE006165) (254 aa) fasta scores: E(): 1.9e-27, 35.628% id in 247 aa, and to Agrobacterium tumefaciens Agr_l_128gMp TR:AAK88848 (EMBL:AE008228) (267 aa) fasta scores: E(): 4.4e-29, 36.052% id in 233 aa
NP_879598.1	Similar to Arthrobacter keyseri transporter ATPase PtrA TR:Q9AGL2 (EMBL:AF331043) (275 aa) fasta scores: E(): 2.6e-35, 48.963% id in 241 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter Pa2294 TR:Q9I1I1 (EMBL:AE004655) (284 aa) fasta scores: E(): 1.1e-36, 46.457% id in 254 aa
NP_879599.1	Similar to Agrobacterium tumefaciens Agr_l_3061p TR:AAK90103 (EMBL:AE008354) (316 aa) fasta scores: E(): 3.6e-08, 27.181% id in 298 aa, and to Rhizobium loti Mll8573 protein Mll8573 TR:Q982M7 (EMBL:AP003014) (342 aa) fasta scores: E(): 7.9e-11, 26.796% id in 362 aa. Also similar to BP2866, 46.197% identity (47.536% ungapped) in 355 aa overlap.
NP_879600.1	Similar to Rhizobium loti Mlr0372 protein Mlr0372 TR:Q98MZ7 (EMBL:AP002994) (296 aa) fasta scores: E(): 0.00021, 24.510% id in 306 aa, and to Agrobacterium tumefaciens Agr_c_2627p TR:AAK87216 (EMBL:AE008068) (292 aa) fasta scores: E(): 0.022, 28.525% id in 305 aa
NP_879601.1	Similar to Escherichia coli acetolactate synthase isozyme III large subunit IlvI or B0077 SW:ILVI_ECOLI (P00893) (574 aa) fasta scores: E(): 1e-42, 30.515% id in 544 aa, and to Methanococcus aeolicus acetohydroxyacid synthase large subunit IlvB TR:O08353 (EMBL:U35458) (599 aa) fasta scores: E(): 5.4e-59, 34.581% id in 561 aa
NP_879602.1	Similar to Rhizobium loti probable integral membrane protein Mlr0973 TR:Q98LL9 (EMBL:AP002996) (410 aa) fasta scores: E(): 1.5e-13, 28.019% id in 207 aa, and to Rhizobium meliloti conserved hypothetical membrane protein Smb20863 TR:CAC49557 (EMBL:AL603646) (343 aa) fasta scores: E(): 6.1e-13, 26.054% id in 261 aa
NP_879603.1	transposase for IS481 element
NP_879604.1	Similar to Escherichia coli acetolactate synthase isozyme III large subunit IlvI or B0077 SW:ILVI_ECOLI (P00893) (574 aa) fasta scores: E(): 4.5e-129, 56.098% id in 574 aa, and to Neisseria meningitidis acetolactate synthase III, large subunit Nmb1577 TR:Q9JYI0 (EMBL:AE002508) (575 aa) fasta scores: E(): 2.2e-152, 64.311% id in 566 aa
NP_879605.1	with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit
NP_879606.1	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis
NP_879607.1	Similar to Agrobacterium sp31749 phosphatidylserine synthase TR:AAL01116 (EMBL:AF410774) (274 aa) fasta scores: E(): 2.3e-21, 40.930% id in 215 aa, and to Pseudomonas aeruginosa phosphatidylserine synthase PssA or Pa4693 TR:Q9HVA3 (EMBL:AE004883) (271 aa) fasta scores: E(): 2.5e-47, 61.778% id in 225 aa
NP_879608.1	no significant database matches
NP_879609.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
NP_879610.1	Similar to Escherichia coli polyribonucleotide nucleotidyltransferase Pnp or B3164 SW:PNP_ECOLI (P05055) (711 aa) fasta scores: E(): 2.2e-165, 62.691% id in 721 aa, and to Neisseria meningitidis  polyribonucleotide nucleotidyltransferase Pnp or Nma0969 TR:Q9JV72 (EMBL:AL162754) (706 aa) fasta scores: E(): 1.9e-172, 65.260% id in 711 aa
NP_879611.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3069 TR:Q9HZD9 (EMBL:AE004731) (205 aa) fasta scores: E(): 3.5e-40, 54.634% id in 205 aa, and to Pseudomonas sp hypothetical 28.9 kDa protein Orf58 TR:AAK50290 (EMBL:U66917) (257 aa) fasta scores: E(): 1.1e-35, 45.852% id in 229 aa
NP_879612.1	transposase for IS481 element
NP_879613.1	catalyzes the formation of 2-oxobutanoate from L-threonine
NP_879614.1	Similar to Sphingomonas aromaticivorans hypothetical 21.4 kDa protein TR:O85864 (EMBL:AF079317) (196 aa) fasta scores: E(): 0.0065, 28.571% id in 161 aa
NP_879615.1	Similar to Rhizobium loti NADPH quinone oxidoreductase Mll3767 TR:Q98FI0 (EMBL:AP003002) (326 aa) fasta scores: E(): 3e-60, 57.669% id in 326 aa, and to Rhizobium meliloti  oxidoreductase Smc00034 TR:CAC45525 (EMBL:AL591785) (327 aa) fasta scores: E(): 8.3e-58, 53.681% id in 326 aa
NP_879616.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
NP_879617.1	Similar to Escherichia coli protein-export membrane protein SecG or B3175 or Z4537 or Ecs4054 SW:SECG_ECOLI (P33582) (110 aa) fasta scores: E(): 3.4e-06, 35.965% id in 114 aa, and to Xylella fastidiosa protein-export membrane protein Xf0304 TR:Q9PGJ6 (EMBL:AE003883) (132 aa) fasta scores: E(): 1.3e-08, 39.098% id in 133 aa
NP_879618.1	Similar to Escherichia coli high-affinity choline transport protein BetT or B0314 or Z0401 or Ecs0360 SW:BETT_ECOLI (P17447) (677 aa) fasta scores: E(): 2.5e-111, 44.296% id in 675 aa, and to Erwinia amylovora high-affinity choline transport protein BetT TR:Q9F806 (EMBL:AF264948) (676 aa) fasta scores: E(): 1.5e-109, 43.004% id in 679 aa. Also similar to BP0831, 37.348% identity (38.522% ungapped) in 656 aa overlap.
NP_879619.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa3174 TR:Q9HZ60 (EMBL:AE004741) (242 aa) fasta scores: E(): 1.4e-13, 31.048% id in 248 aa, and to Rhizobium meliloti  transcription regulator protein Smc00263 TR:CAC46270 (EMBL:AL591788) (282 aa) fasta scores: E(): 1.4e-14, 30.000% id in 250 aa
NP_879620.1	Similar to Clostridium tetanomorphum methylaspartate ammonia-lyase SW:MAAL_CLOTT (Q05514) (413 aa) fasta scores: E(): 4.5e-51, 36.520% id in 408 aa, and to Citrobacter amalonaticus 3-methylaspartate ammonia-lyase TR:O66145 (EMBL:AB005294) (413 aa) fasta scores: E(): 1e-53, 38.107% id in 412 aa. Also similar to BP3177, 40.500% identity (40.704% ungapped) in 400 aa overlap.
NP_879621.1	Similar to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1.3e-34, 35.737% id in 319 aa, and to Agrobacterium tumefaciens Agr_l_312p TR:AAK88723 (EMBL:AE008213) (329 aa) fasta scores: E(): 3.9e-38, 39.048% id in 315 aa
NP_879622.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa0881 TR:Q9I564 (EMBL:AE004522) (450 aa) fasta scores: E(): 8e-29, 33.842% id in 393 aa, and to Agrobacterium tumefaciens Agr_l_2924p TR:AAK90029 (EMBL:AE008346) (448 aa) fasta scores: E(): 4.2e-31, 35.280% id in 428 aa
NP_879623.1	Similar to Variovorax paradoxus 2,4-diphenoxyacetic acid gene cluster TR:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 9e-44, 42.415% id in 323 aa, and to Burkholderia cepacia hypothetical 35.5 kDa protein TR:AAK81675 (EMBL:AF029344) (337 aa) fasta scores: E(): 9e-44, 42.415% id in 323 aa
NP_879624.1	Similar to Neisseria meningitidis invertase/transposase nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter spSE19. pilin inverting protein chnY TR:Q9F7E1 (EMBL:AF282240) (324 aa) fasta scores: E(): 8.2e-50, 47.516% id in 322 aa
NP_879625.1	Similar to Rhizobium loti probable short-chain dehydrogenase/reductase Mlr0808 TR:Q98LZ5 (EMBL:AP002995) (259 aa) fasta scores: E(): 1.2e-30, 45.985% id in 274 aa, and to Rhizobium meliloti  oxidoreductase Smc01157 TR:CAC41799 (EMBL:AL591783) (259 aa) fasta scores: E(): 2.3e-21, 41.791% id in 268 aa
NP_879626.1	Similar to Escherichia coli probable transcriptional regulator LrhA or GenR or B2289 SW:LRHA_ECOLI (P36771) (312 aa) fasta scores: E(): 3.9e-37, 36.396% id in 283 aa, and to Erwinia chrysanthemi pectinase gene transcriptional regulator PecT SW:PECT_ERWCH (P52662) (316 aa) fasta scores: E(): 3.5e-36, 36.704% id in 267 aa
NP_879627.1	Similar to Escherichia coli cystathionine beta-lyase MetC or B3008 SW:METC_ECOLI (P06721) (395 aa) fasta scores: E(): 1.1e-56, 41.795% id in 390 aa, and to Rhizobium meliloti probable cystathionine beta-lyase TR:CAC46058 (EMBL:AL591787) (395 aa) fasta scores: E(): 2.6e-63, 46.073% id in 382 aa. Also similar to BP0112, 42.784% identity in 388 aa overlap.
NP_879628.1	Similar to Rhizobium loti Mlr7142 protein TR:Q987A0 (EMBL:AP003011) (349 aa) fasta scores: E(): 2.1e-12, 26.901% id in 342 aa, and to Rhizobium meliloti hypothetical protein Smb20435 TR:CAC48821 (EMBL:AL603643) (331 aa) fasta scores: E(): 2.3e-12, 26.586% id in 331 aa
NP_879629.1	Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 5.6e-32, 35.474% id in 327 aa, and to Agrobacterium tumefaciens Agr_l_312p TR::AAK88723 (EMBL:AE008213) (329 aa) fasta scores: E(): 6e-30, 33.739% id in 329 aa
NP_879630.1	Similar to Pseudomonas aeruginosa probable thiosulfate sulfurtransferase Pa2603 TR:Q9I0N4 (EMBL:AE004689) (527 aa) fasta scores: E(): 1.4e-45, 40.310% id in 516 aa, and to Agrobacterium tumefaciens Agr_pti_bx104p TR:AAK91049 (EMBL:AE007935) (395 aa) fasta scores: E(): 9.6e-31, 41.987% id in 312 aa
NP_879631.1	Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 4.4e-35, 37.037% id in 324 aa, and to Pseudomonas putida hypothetical 34.5 kDa protein in clcB-clcD intergenic region precursor SW:YCLC_PSEPU (Q47100) (329 aa) fasta scores: E(): 3.7e-32, 34.375% id in 320 aa
NP_879632.1	Similar to Agrobacterium tumefaciens Agr_l_1811p TR:AAK89479 (EMBL:AE008289) (440 aa) fasta scores: E(): 1.4e-42, 32.143% id in 448 aa, and to Rhizobium meliloti oxidoreductase Sma1850 TR:AAK65676 (EMBL:AE007288) (425 aa) fasta scores: E(): 2.5e-39, 33.724% id in 427 aa
NP_879633.1	Similar to Pseudomonas sp hydantoin utilization protein B HyuB SW:HYUB_PSESN (Q01263) (592 aa) fasta scores: E(): 4.3e-44, 29.223% id in 592 aa, and to Rhizobium loti hydantoin utilization protein B Mlr7025 TR:Q987J6 (EMBL:AP003010) (661 aa) fasta scores: E(): 5.8e-133, 52.108% id in 664 aa
NP_879634.1	Similar to Pseudomonas sp hydantoin utilization protein A hyuA SW:HYUA_PSESN (Q01262) (690 aa) fasta scores: E(): 1.3e-75, 34.776% id in 693 aa, and to Rhizobium loti hydantoin utilization protein A Mlr7024 TR:Q987J7 (EMBL:AP003010) (692 aa) fasta scores: E(): 8.9e-130, 53.254% id in 676 aa
NP_879635.1	Similar to Pseudomonas putida pca regulon regulatory protein PcaR SW:PCAR_PSEPU (Q52154) (291 aa) fasta scores: E(): 6e-07, 31.655% id in 139 aa, and to Rhodococcus opacus PcaR TR:O67983 (EMBL:AF003947) (265 aa) fasta scores: E(): 3.5e-08, 28.108% id in 185 aa
NP_879636.1	Identical to the previously sequenced Bordetella bronchiseptica azurin SW:AZUR_BORBR (P00278) (129 aa) fasta scores: E(): 4.2e-49, 100.000% id in 129 aa,and similar to Alcaligenes xylosoxydans xylosoxydans azurin-I precursor Az1 TR:O87169 (EMBL:AB013077) (150 aa) fasta scores: E(): 4e-42, 74.667% id in 150 aa
NP_879637.1	Similar to Vibrio cholerae hypothetical protein Vc2666 TR:Q9KNR5 (EMBL:AE004332) (205 aa) fasta scores: E(): 2.1e-30, 43.781% id in 201 aa, and to Bacillus halodurans Bh3429 protein Bh3429 TR:Q9K7D5 (EMBL:AP001518) (215 aa) fasta scores: E(): 3.8e-14, 31.818% id in 198 aa
NP_879638.1	Similar to Pseudomonas aeruginosa mexE, mexF & oprN genes OprN TR:P95423 (EMBL:X99514) (472 aa) fasta scores: E(): 5e-47, 39.703% id in 471 aa, and to Xanthomonas maltophilia (Pseudomonas maltophilia) (Stenotrophomonas SmeC TR:Q9RBY7 (EMBL:AF173226) (471 aa) fasta scores: E(): 1.1e-31, 33.612% id in 479 aa
NP_879639.1	Similar to Pseudomonas aeruginosa probable Rnd efflux transporter Pa4207 TR:Q9HWH4 (EMBL:AE004837) (1029 aa) fasta scores: E(): 0, 69.697% id in 1023 aa, and to Vibrio cholerae multidrug resistance protein,  Vc0164 TR:Q9KVI2 (EMBL:AE004106) (1036 aa) fasta scores: E(): 3.4e-183, 48.309% id in 1035 aa
NP_879640.1	Similar to Pseudomonas aeruginosa probable Rnd efflux membrane fusion protein precursor Pa4206 TR:Q9HWH5 (EMBL:AE004837) (370 aa) fasta scores: E(): 4.6e-48, 48.011% id in 352 aa, and to Vibrio cholerae hypothetical protein Vc0165 TR:Q9KVI1 (EMBL:AE004106) (368 aa) fasta scores: E(): 1.7e-30, 36.593% id in 317 aa
NP_879641.1	Similar to Streptomyces lipmanii StgU TR:O88133 (EMBL:AJ006517) (210 aa) fasta scores: E(): 7.2e-21, 41.743% id in 218 aa, and to Streptomyces coelicolor hypothetical 23.3 kDa protein Sc2h4.05 TR:O86588 (EMBL:AL031514) (216 aa) fasta scores: E(): 1.1e-19, 39.524% id in 210 aa
NP_879642.1	transposase for IS481 element
NP_879643.1	Similar to Escherichia coli high-affinity choline transport protein BetT or B0314 or Z0401 or Ecs0360 SW:BETT_ECOLI (P17447) (677 aa) fasta scores: E(): 2.1e-92, 42.249% id in 658 aa, and to Pseudomonas aeruginosa probable choline transporter Pa5291 TR:Q9HTR3 (EMBL:AE004941) (661 aa) fasta scores: E(): 2.5e-188, 74.732% id in 653 aa. Also similar to BP0804, 37.348% identity (38.522% ungapped) in 656 aa overlap.
NP_879644.1	Similar to Yersinia pestis hypothetical transcriptional regulator TR:Q9ZC44 (EMBL:AL031866) (320 aa) fasta scores: E(): 3.9e-39, 54.091% id in 220 aa, and to Rhizobium meliloti  LysR-type regulator Sma0498 TR:AAK64920 (EMBL:AE007219) (299 aa) fasta scores: E(): 2.7e-13, 31.364% id in 220 aa
NP_879645.1	Similar to Rhizobium loti 3',5'-cyclic-nucleotide phosphodiesterase CpdA homolog Mll9676 TR:Q98NZ2 (EMBL:AP003017) (269 aa) fasta scores: E(): 2.2e-26, 35.659% id in 258 aa, and to Caulobacter crescentus hypothetical protein Cc3556 TR:Q9A2K5 (EMBL:AE006014) (262 aa) fasta scores: E(): 5.4e-20, 35.484% id in 248 aa
NP_879646.1	Similar to Bacillus megaterium hypothetical 24.9 kDa protein in cytochrome p450meg gene 3'region TR:Q06074 (EMBL:Z21972) (216 aa) fasta scores: E(): 9.7e-13, 31.658% id in 199 aa, and to Caulobacter crescentus Pap2 superfamily protein Cc3019 TR:Q9A424 (EMBL:AE005965) (259 aa) fasta scores: E(): 1.3e-10, 36.134% id in 238 aa
NP_879647.1	Similar to Rhizobium meliloti  oxidoreductase Smc01572 TR:CAC46902 (EMBL:AL591790) (155 aa) fasta scores: E(): 0.00047, 32.593% id in 135 aa, and to Rhizobium loti probable oxidoreductase Mlr0254 TR:Q98N82 (EMBL:AP002994) (305 aa) fasta scores: E(): 0.016, 30.075% id in 133 aa
NP_879648.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa4093 TR:Q9HWT5 (EMBL:AE004825) (138 aa) fasta scores: E(): 1.2e-09, 40.164% id in 122 aa, and to Rhizobium meliloti hypothetical transmembrane protein Smc01805 TR:CAC45823 (EMBL:AL591786) (143 aa) fasta scores: E(): 3e-08, 34.815% id in 135 aa
NP_879649.1	transposase for IS481 element
NP_879650.1	Identical to the previously sequenced Bordetella pertussis outer membrane porin protein precursor SW:OMP_BORPE (Q04064) (385 aa) fasta scores: E(): 4e-149, 100.000% id in 385 aa. Also similar to BP2851 (53.728%% identity in 389 aa overlap), and BP0267 (58.844% identity in 294 aa overlap), and its C-terminus is similar to BP0138 (66.667% identity in 90 aa overlap).
NP_879651.1	Similar to Paracoccus denitrificans NADH-ubiquinone oxidoreductase chain 7 Nqo7 SW:NQO7_PARDE (P29919) (121 aa) fasta scores: E(): 5e-28, 60.345% id in 116 aa, and to Rhodobacter capsulatus NADH dehydrogenase I chain A NuoA SW:NUOA_RHOCA (O84969) (126 aa) fasta scores: E(): 1.1e-28, 60.345% id in 116 aa
NP_879652.1	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen
NP_879653.1	Catalyzes the transfer of electrons from NADH to quinone
NP_879654.1	Catalyzes the transfer of electrons from NADH to quinone
NP_879655.1	Catalyzes the transfer of electrons from NADH to quinone
NP_879656.1	Similar to Rhizobium meliloti NADH dehydrogenase I chain F 2 NuoF2 SW:NUF2_RHIME (P56913) (421 aa) fasta scores: E(): 3.8e-86, 52.518% id in 417 aa, and to Neisseria meningitidis NADH dehydrogenase I chain F NuoF or Nma0014 TR:Q9JX83 (EMBL:AL162752) (433 aa) fasta scores: E(): 2.7e-133, 77.240% id in 413 aa
NP_879657.1	Catalyzes the transfer of electrons from NADH to ubiquinone
NP_879658.1	Catalyzes the transfer of electrons from NADH to quinone
NP_879659.1	Catalyzes the transfer of electrons from NADH to quinone
NP_879660.1	Similar to Paracoccus denitrificans NADH-ubiquinone oxidoreductase chain 10 Nqo10 SW:NQOA_PARDE (P29922) (200 aa) fasta scores: E(): 4.2e-21, 46.927% id in 179 aa, and to Neisseria meningitidis NADH dehydrogenase I, J subunit Nmb0253 TR:Q9K1B2 (EMBL:AE002382) (223 aa) fasta scores: E(): 5.4e-28, 46.009% id in 213 aa
NP_879661.1	Catalyzes the transfer of electrons from NADH to quinone
NP_879662.1	Similar to Synechococcus sp NADH-plastoquinone oxidoreductase chain 5 NdhF SW:NU5C_SYNP2 (P31971) (664 aa) fasta scores: E(): 3.2e-81, 42.285% id in 674 aa, and to Neisseria meningitidis NADH dehydrogenase I chain L NuoL or Nma0002 SW:NUOL_NEIMA (Q9JX92) (674 aa) fasta scores: E(): 9.9e-147, 61.367% id in 673 aa
NP_879663.1	Catalyzes the transfer of electrons from NADH to quinone
NP_879664.1	Catalyzes the transfer of electrons from NADH to quinone
NP_879665.1	Similar to Neisseria meningitidis hypothetical inner membrane protein Nma2227 TR:Q9JSL9 (EMBL:AL162758) (116 aa) fasta scores: E(): 4.5e-10, 36.634% id in 101 aa
NP_879666.1	Similar to Pseudomonas aeruginosa hydroxamate-type ferrisiderophore receptor PiuA or Fiu or Pa4514 TR:O68590 (EMBL:AF051690) (753 aa) fasta scores: E(): 1.1e-95, 37.317% id in 753 aa, and to Caulobacter crescentus TonB-dependent receptor Cc0028 TR:Q9AC38 (EMBL:AE005677) (851 aa) fasta scores: E(): 1.7e-47, 38.562% id in 765 aa
NP_879667.1	Similar to Pseudomonas aeruginosa hydroxamate-type ferrisiderophore receptor PiuA or Fiu or Pa4514 TR:O68590 (EMBL:AF051690) (753 aa) fasta scores: E(): 3.4e-106, 43.742% id in 775 aa, and to Escherichia coli probable TonB-dependent receptor YbiL precursor YbiL or B0805 SW:YBIL_ECOLI (P75780) (760 aa) fasta scores: E(): 7.2e-50, 35.058% id in 773 aa
NP_879668.1	Similar to Caulobacter crescentus acetyltransferase, GnaT family Cc1083 TR:Q9A9B1 (EMBL:AE005785) (173 aa) fasta scores: E(): 3.2e-14, 32.530% id in 166 aa, and to Rhizobium loti Mll3172 protein Mll3172 TR:Q98GU4 (EMBL:AP003001) (179 aa) fasta scores: E(): 1.5e-13, 32.544% id in 169 aa
NP_879669.1	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
NP_879670.1	catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; catalytic
NP_879671.1	Similar to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 8.7e-43, 38.889% id in 324 aa, and to Agrobacterium tumefaciens Agr_l_312p TR:AAK88723 (EMBL:AE008213) (329 aa) fasta scores: E(): 4.2e-49, 46.226% id in 318 aa
NP_879672.1	Similar to Salmonella typhimurium OsmT protein OsmT TR:CAC44465 (EMBL:AJ313506) (308 aa) fasta scores: E(): 1.3e-25, 34.354% id in 294 aa, and to Rhizobium meliloti transcriptional regulator protein smb20123 TR:CAC48523 (EMBL:AL603642) (298 aa) fasta scores: E(): 8.2e-30, 35.932% id in 295 aa
NP_879673.1	Similar to Escherichia coli, and phosphoserine phosphatase SerB or B4388 or Z5989 or Ecs5346 SW:SERB_ECOLI (P06862) (322 aa) fasta scores: E(): 2.1e-28, 46.444% id in 239 aa, and to Neisseria meningitidis  phosphoserine phosphatase SerB or nma1179 TR:Q9JUR1 (EMBL:AL162755) (277 aa) fasta scores: E(): 1.6e-31, 49.327% id in 223 aa
NP_879674.1	Similar to Escherichia coli transcription-repair coupling factor Mfd or B1114 SW:MFD_ECOLI (P30958) (1148 aa) fasta scores: E(): 6e-212, 51.619% id in 1143 aa, and to Pseudomonas aeruginosa transcription-repair coupling protein Mfd or Pa3002 TR:Q9HZK3 (EMBL:AE004725) (1148 aa) fasta scores: E(): 0, 54.440% id in 1126 aa
NP_879675.1	4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers
NP_879676.1	catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate
NP_879677.1	transposase for IS481 element
NP_879678.1	catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate
NP_879679.1	Similar to Escherichia coli aminopeptidase N PepN or B0932 SW:AMPN_ECOLI (P04825) (869 aa) fasta scores: E(): 1.6e-65, 47.052% id in 899 aa, and to Caulobacter crescentus aminopeptidase N PepN or Cc2481 SW:AMPN_CAUCR (P37893) (863 aa) fasta scores: E(): 1.3e-70, 48.946% id in 901 aa
NP_879680.1	Similar to Zymomonas mobilis hypothetical 23.9 kDa protein TR:Q9EZA0 (EMBL:AF300471) (220 aa) fasta scores: E(): 0.00027, 33.333% id in 207 aa
NP_879681.1	transposase for IS481 element
NP_879682.1	Similar to Rhizobium loti ATP-binding protein of ABC transporter Mll0815 TR:Q98LY9 (EMBL:AP002995) (601 aa) fasta scores: E(): 3.1e-156, 74.624% id in 599 aa, and to Agrobacterium tumefaciens Agr_l_309p TR:AAK88722 (EMBL:AE008213) (600 aa) fasta scores: E(): 4.1e-147, 68.781% id in 599 aa
NP_879683.1	catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds; may be involved in selenium cycling by forming dimethylselenide and/or dimethyldiselenide
NP_879684.1	Identical to the previously sequenced Bordetella pertussis vir-repressed protein Vir-18 TR:Q04274 (EMBL:M37228) (23 aa) fasta scores: E(): 0.0007, 100.000% id in 23 aa
NP_879685.1	no significant database matches
NP_879686.1	Similar to Escherichia coli hypothetical lipoprotein YdcL precursor YdcL or B1431 or Z2287 or Ecs2036 SW:YDCL_ECOLI (P76101) (222 aa) fasta scores: E(): 4.1e-13, 30.942% id in 223 aa, and to Rhizobium meliloti polysaccharide export system periplasmic transmembrane protein Smc01794 TR:CAC45812 (EMBL:AL591786) (191 aa) fasta scores: E(): 2.1, 28.161% id in 174 aa
NP_879687.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3353 TR:Q9HYP3 (EMBL:AE004757) (263 aa) fasta scores: E(): 0.00072, 27.426% id in 237 aa
NP_879688.1	Similar to Campylobacter coli phospholipase A PldA TR:O32349 (EMBL:Y11031) (297 aa) fasta scores: E(): 1.3e-09, 27.170% id in 265 aa, and to Campylobacter jejuni phospholipase A PldA or Cj1351 TR:Q9PMU8 (EMBL:AL139078) (329 aa) fasta scores: E(): 2.8e-09, 26.459% id in 257 aa
NP_879689.1	Similar to Methanothermobacter thermautotrophicus conserved protein Mth965 TR:O27046 (EMBL:AE000870) (452 aa) fasta scores: E(): 2.8e-21, 27.912% id in 455 aa, and to Agrobacterium tumefaciens Agr_l_2924p TR:AAK90029 (EMBL:AE008346) (448 aa) fasta scores: E(): 2e-24, 29.899% id in 398 aa
NP_879690.1	Similar to Glycine max acetyl-CoA carboxylase AccB-1 TR:AAF80463 (EMBL:AF162283) (262 aa) fasta scores: E(): 1.8e-07, 33.939% id in 165 aa, and to Synechococcus sp biotin carboxyl carrier protein accB TR:Q54761 (EMBL:U59235) (158 aa) fasta scores: E(): 5.9e-12, 41.358% id in 162 aa. Also similar to BP2997, 41.333% identity (44.928% ungapped) in 150 aa overlap.
NP_879691.1	Similar to Methanococcus jannaschii pyruvate carboxylase subunit B PycB or Mj1231 SW:PYCB_METJA (Q58628) (567 aa) fasta scores: E(): 5.8e-52, 35.685% id in 482 aa, and to Pyrococcus horikoshii 571aa long hypothetical oxaloacetate decarboxylase alpha chain ph0834 TR:O58564 (EMBL:AP000003) (571 aa) fasta scores: E(): 3.8e-49, 38.073% id in 436 aa
NP_879693.1	Similar to Mycobacterium tuberculosis CDC1551 conserved hypothetical protein Mt2360 TR:AAK46645 (EMBL:AE007078) (307 aa) fasta scores: E(): 2e-09, 25.498% id in 251 aa, and to Agrobacterium tumefaciens Agr_c_2623p TR:AAK87214 (EMBL:AE008068) (291 aa) fasta scores: E(): 6e-07, 24.413% id in 213 aa
NP_879694.1	Similar to Arabidopsis thaliana induced upon wounding stress TR:Q39171 (EMBL:X99793) (386 aa) fasta scores: E(): 9.1e-20, 30.458% id in 371 aa, and to Arabidopsis thaliana hypothetical 44.2 kDa protein T22a6.50 or At4g24220 TR:Q9STX2 (EMBL:AL078637) (388 aa) fasta scores: E(): 6.2e-26, 31.892% id in 370 aa
NP_879695.1	Similar to Bacillus subtilis hypothetical transcriptional regulator YurK SW:YURK_BACSU (O32152) (242 aa) fasta scores: E(): 2.1e-15, 30.472% id in 233 aa, and to Deinococcus radiodurans transcriptional regulator, GntR family dra0211 TR:Q9RYU6 (EMBL:AE001863) (279 aa) fasta scores: E(): 3.7e-12, 29.046% id in 241 aa
NP_879696.1	Similar to Escherichia coli biotin carboxylase AccC or FabG or B3256 SW:ACCC_ECOLI (P24182) (449 aa) fasta scores: E(): 9.6e-86, 54.018% id in 448 aa, and to Anabaena sp biotin carboxylase AccC SW:ACCC_ANASP (Q06862) (447 aa) fasta scores: E(): 5.9e-93, 56.629% id in 445 aa
NP_879697.1	transposase for IS481 element
NP_879698.1	no significant database matches
NP_879699.1	no significant database matches
NP_879700.1	Similar to Rhizobium meliloti mannose-6-phosphate isomerase Pmi or R02982 or Smc03111 SW:MANA_RHIME (P29954) (387 aa) fasta scores: E(): 4.5, 27.763% id in 389 aa, and to Caulobacter crescentus mannose-6-phosphate isomerase Cc3617 TR:Q9A2E8 (EMBL:AE006020) (386 aa) fasta scores: E(): 1.3e-13, 32.031% id in 384 aa
NP_879701.1	Similar to Halobacterium sp 50S ribosomal protein l44E Rpl44e or Vng0551G TR:Q9HRT6 (EMBL:AE005006) (61 aa) fasta scores: E(): 8.8, 39.024% id in 41 aa
NP_879702.1	no significant database matches
NP_879703.1	transposase for IS481 element
NP_879704.1	Similar to Pseudomonas spCA10 ferredoxin component of carbazole 1,9a-dioxygenase CaraC TR:O32475 (EMBL:D89064) (107 aa) fasta scores: E(): 0.16, 28.736% id in 87 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4711 TR:Q9HV87 (EMBL:AE004885) (115 aa) fasta scores: E(): 3.9e-10, 35.965% id in 114 aa
NP_879705.1	Similar to Rhizobium loti ABC transporter ATP-binding protein Mlr7818 TR:Q984W3 (EMBL:AP003012) (627 aa) fasta scores: E(): 1.9e-115, 56.324% id in 593 aa, and to Rhizobium meliloti probable ABC transporter ATP-binding transmembrane protein Smc00550 TR:CAC45699 (EMBL:AL591786) (627 aa) fasta scores: E(): 5.7e-117, 57.022% id in 591 aa
NP_879706.1	Similar to Corynebacterium SP 2,5-diketo-D-gluconic acid reductase TR:P06632 (EMBL:M12799) (278 aa) fasta scores: E(): 5.9e-54, 53.008% id in 266 aa, and to Streptomyces coelicolor  oxidoreductase Sc4b5.01C TR:Q9ZBW7 (EMBL:AL034443) (277 aa) fasta scores: E(): 1.7e-61, 58.303% id in 271 aa
NP_879707.1	Similar to Streptomyces coelicolor  aldo/keto reductase Scf81.28C TR:Q9RJC4 (EMBL:AL133171) (307 aa) fasta scores: E(): 6.4e-83, 66.667% id in 309 aa, and to Escherichia coli hypothetical oxidoreductase YajO or b0419 SW:YAJO_ECOLI (P77735) (324 aa) fasta scores: E(): 9.9e-80, 61.846% id in 325 aa
NP_879708.1	Similar to Caulobacter crescentus hypothetical protein Cc2926 TR:Q9A4B1 (EMBL:AE005957) (70 aa) fasta scores: E(): 0.0073, 44.231% id in 52 aa
NP_879709.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa1909 TR:Q9I2J5 (EMBL:AE004617) (383 aa) fasta scores: E(): 1.4e-72, 52.910% id in 378 aa, and to Caulobacter crescentus hypothetical protein Cc2927 TR:Q9A4B0 (EMBL:AE005957) (394 aa) fasta scores: E(): 2.4e-53, 50.681% id in 367 aa
NP_879710.1	Similar to Escherichia coli serine/threonine protein phosphatase 1 PphA or PrpA or B1838 SW:PRP1_ECOLI (P55798) (218 aa) fasta scores: E(): 1.9e-18, 34.821% id in 224 aa, and to Bacteriophage lambda serine/threonine protein phosphatase SW:PP_LAMBD (P03772) (221 aa) fasta scores: E(): 1.2e-18, 33.803% id in 213 aa
NP_879711.1	Similar to Escherichia coli penicillin-binding protein 1A MrcA or PonA or B3396 SW:PBPA_ECOLI (P02918) (850 aa) fasta scores: E(): 2.1e-61, 37.243% id in 827 aa, and to Pseudomonas aeruginosa penicillin-binding protein 1A MrcA or PonA or Pa5045 SW:PBPA_PSEAE (Q07806) (822 aa) fasta scores: E(): 3.7e-62, 38.882% id in 805 aa
NP_879712.1	Similar to Rickettsia conorii acylamino acid-releasing enzyme Rc0603 TR:AAL03141 (EMBL:AE008621) (676 aa) fasta scores: E(): 2.3e-62, 34.783% id in 621 aa, and to Caulobacter crescentus prolyl oligopeptidase family protein Cc3723 TR:Q9A243 (EMBL:AE006030) (667 aa) fasta scores: E(): 3.4e-42, 30.653% id in 659 aa
NP_879713.1	Similar to Halobacterium halobium hypothetical 15.6 kDa protein in phr 5'region SW:YPHR_HALHA (P20378) (151 aa) fasta scores: E(): 2e-08, 29.688% id in 128 aa, and to Halobacterium sp Vng1336C TR:Q9HQ45 (EMBL:AE005055) (151 aa) fasta scores: E(): 2e-08, 29.688% id in 128 aa
NP_879714.1	involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function
NP_879715.1	transposase for IS481 element
NP_879716.1	Similar to Streptomyces wedmorensis phosphonopyruvate decarboxylase Fom2 TR:Q56190 (EMBL:AB016934) (384 aa) fasta scores: E(): 0.00013, 32.278% id in 158 aa, and to Methanothermobacter thermautotrophicus phosphonopyruvate decarboxylase related protein Mth1206 TR:O27274 (EMBL:AE000888) (165 aa) fasta scores: E(): 9.5e-10, 36.957% id in 138 aa
NP_879717.1	Similar to Escherichia coli  aliphatic sulfonates binding protein precursor SsuA or B0936 SW:SSUA_ECOLI (P75853) (319 aa) fasta scores: E(): 1.7e-09, 24.903% id in 257 aa, and to Agrobacterium tumefaciens Agr_l_1399p TR:AAK89280 (EMBL:AE008268) (338 aa) fasta scores: E(): 2.9e-13, 28.197% id in 305 aa
NP_879718.1	Similar to Escherichia coli taurine transport system permease TauC or SsiC or B0367 SW:TAUC_ECOLI (Q47539) (275 aa) fasta scores: E(): 1e-26, 35.887% id in 248 aa, and to Pseudomonas aeruginosa probable permease of ABC taurine transporter Pa3936 TR:Q9HX80 (EMBL:AE004811) (272 aa) fasta scores: E(): 4.9e-27, 33.585% id in 265 aa
NP_879719.1	Similar to Escherichia coli taurine transport system permease TauC or SsiC or B0367 SW:TAUC_ECOLI (Q47539) (275 aa) fasta scores: E(): 2.1e-25, 32.530% id in 249 aa, and to Rhizobium loti taurine transport system permease Mlr4519 TR:Q98DW5 (EMBL:AP003004) (286 aa) fasta scores: E(): 4.4e-24, 32.830% id in 265 aa
NP_879720.1	Similar to Methanothermobacter thermautotrophicus conserved protein Mth965 TR:O27046 (EMBL:AE000870) (452 aa) fasta scores: E(): 3.4e-34, 32.143% id in 420 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0881 TR:Q9I564 (EMBL:AE004522) (450 aa) fasta scores: E(): 2.2e-30, 29.556% id in 450 aa
NP_879721.1	Similar to Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD or B2661 SW:GABD_ECOLI (P25526) (482 aa) fasta scores: E(): 1.3e-46, 35.532% id in 470 aa, and to Bacillus halodurans NADP-dependent glyceraldehyde-3-phosphate dehydrogenase Bh1738 TR:Q9KC36 (EMBL:AP001513) (482 aa) fasta scores: E(): 7.4e-67, 40.812% id in 468 aa
NP_879722.1	catalyzes the oxidation of tricarballylate to cis-aconitate; FAD-dependent; required for the utilization of tricarballylate as a carbon and energy source by S. enterica
NP_879723.1	Similar to Escherichia coli citrate utilization protein B CitB SW:CIT2_ECOLI (P05853) (379 aa) fasta scores: E(): 2.6e-91, 60.743% id in 377 aa, and to Salmonella typhi  citrate utilisation protein CitB TR:Q9L5J7 (EMBL:AF250878) (379 aa) fasta scores: E(): 2.3e-90, 60.212% id in 377 aa
NP_879724.1	Similar to Bacillus subtilis hypothetical 39.5 kDa protein in sigZ-csn intergenic region YraM SW:YRAM_BACSU (O07931) (367 aa) fasta scores: E(): 3.4e-41, 38.462% id in 364 aa, and to Vibrio cholerae hypothetical protein Vc1339 TR:Q9KSB9 (EMBL:AE004213) (400 aa) fasta scores: E(): 5.1e-39, 34.896% id in 384 aa. Also similar to BP2370, 35.459% identity (36.968% ungapped) in 392 aa overlap.
NP_879725.1	Similar to Methanococcus jannaschii hypothetical protein Mj0255 SW:Y255_METJA (Q57703) (251 aa) fasta scores: E(): 2.6e-16, 32.500% id in 240 aa, and to Methanothermobacter thermautotrophicus conserved protein Mth1674 TR:O27710 (EMBL:AE000925) (258 aa) fasta scores: E(): 3.5e-16, 30.116% id in 259 aa
NP_879726.1	Similar to Klebsiella oxytoca CymJ TR:Q48400 (EMBL:X86014) (268 aa) fasta scores: E(): 5.8e-10, 24.895% id in 237 aa, and to Bacillus subtilis YrhO TR:O05405 (EMBL:U93874) (275 aa) fasta scores: E(): 4.8e-13, 25.704% id in 284 aa
NP_879727.1	Similar to Homo sapiens unknown TR:AAH09403 (EMBL:BC009403) (314 aa) fasta scores: E(): 1.5e-30, 41.702% id in 235 aa, and to naphthalenesulfonate-degrading bacterium BN6 homolog to 2-hydroxyhepta-2 TR:Q50913 (EMBL:U38978) (144 aa) fasta scores: E(): 2.1e-31, 58.451% id in 142 aa
NP_879728.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa1213 TR:Q9I4C5 (EMBL:AE004551) (319 aa) fasta scores: E(): 2.2e-14, 30.556% id in 288 aa
NP_879729.1	Similar to Comamonas testosteroni Orf4 protein TR:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 2.6e-40, 36.977% id in 311 aa, and to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 9.2e-39, 35.647% id in 317 aa
NP_879730.1	Similar to alpha proteobacterium Y3F LysR family transcriptional regulator PcaQ TR:Q9L5A8 (EMBL:AF253466) (308 aa) fasta scores: E(): 5.8e-19, 30.293% id in 307 aa, and to Pseudomonas aeruginosa probable transcriptional regulator Pa2206 TR:Q9I1R1 (EMBL:AE004647) (315 aa) fasta scores: E(): 5.6e-22, 31.707% id in 287 aa
NP_879731.1	Similar to Helicobacter pylori J99  Jhp0345 TR:Q9ZM77 (EMBL:AE001470) (189 aa) fasta scores: E(): 0.02, 22.527% id in 182 aa, and to Streptomyces coelicolor membrane protein Sc5e9.11 TR:Q9EWM6 (EMBL:AL446003) (233 aa) fasta scores: E(): 0.15, 28.333% id in 180 aa
NP_879732.1	Similar to Pseudomonas diterpeniphila coenzyme A ligase TdtL TR:AAK95584 (EMBL:AF274704) (543 aa) fasta scores: E(): 7.2e-54, 33.333% id in 546 aa, and to Escherichia coli probable crotonobetaine/carnitine-CoA ligase CaiC or B0037 SW:CAIC_ECOLI (P31552) (522 aa) fasta scores: E(): 1.7e-38, 29.039% id in 489 aa
NP_879733.1	Similar to Burkholderia cepacia hypothetical 35.5 kDa protein TR:AAK81675 (EMBL:AF029344) (337 aa) fasta scores: E(): 5.3e-24, 33.779% id in 299 aa, and to Comamonas testosteroni Orf4 protein TR:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 3e-25, 33.750% id in 320 aa
NP_879734.1	Similar to Methanothermobacter thermautotrophicus conserved protein Mth1398 TR:O27449 (EMBL:AE000902) (133 aa) fasta scores: E(): 1.1e-07, 35.398% id in 113 aa, and to Archaeoglobus fulgidus conserved hypothetical protein Af2417 TR:O30254 (EMBL:AE001108) (122 aa) fasta scores: E(): 2.2e-07, 37.349% id in 83 aa
NP_879735.1	no significant database matches. Similar to BP0328, 48.598% identity (48.598% ungapped) in 107 aa overlap.
NP_879736.1	Similar to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1e-39, 39.264% id in 326 aa, and to Agrobacterium tumefaciens Agr_l_312p TR:AAK88723 (EMBL:AE008213) (329 aa) fasta scores: E(): 9.5e-39, 38.509% id in 322 aa
NP_879737.1	Similar to Caulobacter crescentus isoleucine biosynthesis transcriptional activator IlvR or Cc3045 SW:ILVR_CAUCR (P52670) (296 aa) fasta scores: E(): 1.2e-22, 37.091% id in 275 aa, and to Pseudomonas aeruginosa probable transcriptional regulator Pa1826 TR:Q9I2R9 (EMBL:AE004609) (301 aa) fasta scores: E(): 5.1e-28, 39.373% id in 287 aa
NP_879738.1	Similar to Bacteriophage HP1 hypothetical 14.9 kDa protein in rep-hol intergenic region SW:YO14_BPHP1 (P51716) (133 aa) fasta scores: E(): 5.6e-11, 37.795% id in 127 aa, and to Haemophilus influenzae phage HP2 Orf14 TR:AAK37796 (EMBL:AY027935) (133 aa) fasta scores: E(): 5.6e-11, 37.795% id in 127 aa
NP_879739.1	transposase for IS481 element
NP_879740.1	Similar to Rhizobium loti Msr2149 protein Msr2149 TR:Q98J18 (EMBL:AP002999) (62 aa) fasta scores: E(): 2.3e-09, 51.667% id in 60 aa, and to Rhizobium meliloti hypothetical protein Smc04441 TR:CAC46618 (EMBL:AL591789) (62 aa) fasta scores: E(): 8.8e-09, 50.000% id in 60 aa
NP_879741.1	Similar to Erwinia chrysanthemi sugar efflux transpoter SotB TR:Q9S3J9 (EMBL:AJ249181) (395 aa) fasta scores: E(): 1.7e-30, 31.967% id in 366 aa, and to Pseudomonas aeruginosa probable Mfs transporter pa2933 TR:Q9HZR4 (EMBL:AE004719) (392 aa) fasta scores: E(): 1e-82, 64.541% id in 392 aa
NP_879742.1	Similar to Alcaligenes eutrophus phosphoglycolate phosphatase, chromosomal CbbzC SW:GPHC_ALCEU (P40852) (231 aa) fasta scores: E(): 2.9e-17, 36.316% id in 190 aa, and to Neisseria meningitidis  phosphatase Nma0828 TR:Q9JVI3 (EMBL:AL162754) (220 aa) fasta scores: E(): 8.7e-29, 40.278% id in 216 aa
NP_879743.1	Involved in ubiquinone biosynthesis
NP_879744.1	Highly similar to Bordetella avium outer membrane protein A precursor OmpA SW:OMPA_BORAV (Q05146) (194 aa) fasta scores: E(): 5.7e-67, 91.753% id in 194 aa, and to Bordetella petrii OmpA protein OmpA TR:Q9S3M1 (EMBL:AJ242599) (152 aa) fasta scores: E(): 5.1e-49, 88.079% id in 151 aa
NP_879745.1	negatively supercoils closed circular double-stranded DNA
NP_879746.1	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine
NP_879747.1	Similar to Escherichia coli P-protein [includes: chorismate mutase and prephenate dehydratase] PheA or B2599 or Z3891 or Ecs3462 SW:PHEA_ECOLI (P07022) (386 aa) fasta scores: E(): 4.9e-27, 33.773% id in 379 aa, and to Neisseria meningitidis chorismate mutase/prephenate dehydratase nmb0446 TR:Q9K0W1 (EMBL:AE002401) (362 aa) fasta scores: E(): 3.3e-66, 50.276% id in 362 aa
NP_879748.1	Similar to Bordetella bronchiseptica prephenate dehydrogenase TyrA TR:Q9RND8 (EMBL:AF182427) (299 aa) fasta scores: E(): 4.1e-108, 99.331% id in 299 aa, and to Rhizobium meliloti  cyclohexadienyl dehydrogenase and adh prephenate dehydrogenase TR:CAC47240 (EMBL:AL591791) (307 aa) fasta scores: E(): 1.2e-33, 43.110% id in 283 aa
NP_879749.1	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis
NP_879750.1	Catalyzes the formation of (d)CDP from ATP and (d)CMP
NP_879751.2	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins
NP_879752.1	Similar to Escherichia coli integration host factor beta-subunit IhfB or HimD or Hip or B0912 or Z1258 or Ecs0995 SW:IHFB_ECOLI (P08756) (94 aa) fasta scores: E(): 5.1e-16, 56.383% id in 94 aa, and to Pseudomonas aeruginosa integration host factor beta-subunit IhfB or HimD or Pa3161 SW:IHFB_PSEAE (Q51473) (94 aa) fasta scores: E(): 4.3e-18, 62.637% id in 91 aa
NP_879753.1	Similar to Neisseria meningitidis  inner membrane hypothetical protein Nma2149 TR:Q9JST1 (EMBL:AL162758) (104 aa) fasta scores: E(): 0.0012, 33.981% id in 103 aa, and to Bacillus halodurans Bh1239 protein Bh1239 TR:Q9KDH4 (EMBL:AP001511) (105 aa) fasta scores: E(): 7.1, 27.059% id in 85 aa
NP_879754.1	Similar to Escherichia coli hypothetical protein YciM precursor YciM or B1280 or Z2526 or Ecs1853 SW:YCIM_ECOLI (P45576) (389 aa) fasta scores: E(): 4.3e-21, 31.486% id in 397 aa, and to Xylella fastidiosa hypothetical protein Xf2435 TR:Q9PAR0 (EMBL:AE004052) (398 aa) fasta scores: E(): 4e-25, 33.668% id in 398 aa
NP_879755.1	Similar to Salmonella typhimurium ADP-heptose synthase RfaE TR:Q9AJ74 (EMBL:AF155126) (477 aa) fasta scores: E(): 7.1e-50, 52.508% id in 299 aa, and to Burkholderia pseudomallei  ADP-heptose synthase WaaE TR:Q9WWX7 (EMBL:AF159428) (307 aa) fasta scores: E(): 6.6e-59, 59.603% id in 302 aa
NP_879756.1	Similar to Escherichia coli ADP-L-glycero-D-manno-heptose-6-epimerase RfaD or HtrM or B3619 or Z5046 or Ecs4497 SW:RFAD_ECOLI (P17963) (310 aa) fasta scores: E(): 4.9e-49, 52.134% id in 328 aa, and to Burkholderia pseudomallei  ADP-glycero-mannoheptose epimerase GmhD TR:Q9WWX6 (EMBL:AF159428) (330 aa) fasta scores: E(): 2.2e-81, 62.346% id in 324 aa
NP_879757.1	Similar to Neisseria gonorrhoeae ComE TR:Q9EU10 (EMBL:AF268317) (99 aa) fasta scores: E(): 0.0033, 35.714% id in 84 aa, and to Xylella fastidiosa hypothetical protein Xf0593 xf0593 TR:Q9PFR4 (EMBL:AE003905) (109 aa) fasta scores: E(): 0.07, 34.524% id in 84 aa
NP_879758.1	transposase for IS481 element
NP_879759.1	catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide
NP_879760.1	Similar to Escherichia coli membrane-bound lytic murein transglycosylase B precursor MltB or B2701 SW:MLTB_ECOLI (P41052) (361 aa) fasta scores: E(): 4.8e-28, 35.696% id in 381 aa, and to Pseudomonas aeruginosa membrane-bound lytic transglycosylase precursor MltB TR:Q9X6V5 (EMBL:AF147448) (336 aa) fasta scores: E(): 5.8e-29, 39.172% id in 314 aa
NP_879761.1	Similar to Neisseria meningitidis histone deacetylase family protein Nmb0605 TR:Q9K0J2 (EMBL:AE002416) (369 aa) fasta scores: E(): 2.4e-50, 44.156% id in 308 aa, and to Rhizobium meliloti conserved hypothetical protein Smc00969 TR:CAC45455 (EMBL:AL591785) (309 aa) fasta scores: E(): 9.7e-49, 45.192% id in 312 aa
NP_879762.1	Similar to Bradyrhizobium japonicum electron transfer flavoprotein beta-subunit EtfB or EtfS SW:ETFB_BRAJA (P53575) (249 aa) fasta scores: E(): 9.4e-59, 69.076% id in 249 aa, and to Pseudomonas aeruginosa electron transfer flavoprotein beta-subunit EtfB or Pa2952 TR:Q9HZP6 (EMBL:AE004721) (249 aa) fasta scores: E(): 3.5e-62, 74.297% id in 249 aa
NP_879763.1	Similar to Bradyrhizobium japonicum electron transfer flavoprotein alpha-subunit EtfA or EtfL SW:ETFA_BRAJA (P53573) (314 aa) fasta scores: E(): 4.3e-64, 68.065% id in 310 aa, and to Pseudomonas aeruginosa electron transfer flavoprotein alpha-subunit EtfA or Pa2951 TR:Q9HZP7 (EMBL:AE004721) (309 aa) fasta scores: E(): 2.5e-67, 70.550% id in 309 aa
NP_879764.1	Similar to Rhizobium loti probable acyl-CoA dehydrogenase Mlr6975 TR:Q987P3 (EMBL:AP003010) (583 aa) fasta scores: E(): 2.9e-96, 50.984% id in 610 aa, and to Rhizobium meliloti  acyl-CoA dehydrogenase Smc00977 TR:CAC45447 (EMBL:AL591785) (593 aa) fasta scores: E(): 1.2e-95, 48.571% id in 595 aa
NP_879765.1	Similar to Mus musculus antioxidant protein 2 Aop2 or Ltw4 or Prdx5 SW:AOP2_MOUSE (O08709) (223 aa) fasta scores: E(): 1.3e-42, 55.605% id in 223 aa, and to Pseudomonas aeruginosa probable antioxidant protein Pa3450 TR:Q9HYF6 (EMBL:AE004765) (212 aa) fasta scores: E(): 6.9e-68, 79.048% id in 210 aa
NP_879766.1	Similar to Escherichia coli sulfate-binding protein precursor Sbp or B3917 SW:SUBI_ECOLI (P06997) (329 aa) fasta scores: E(): 3.5e-85, 67.732% id in 313 aa, and to Enterobacter cloacae  sulfur-binding protein SbP TR:Q9Z6C2 (EMBL:AF098509) (329 aa) fasta scores: E(): 5.5e-87, 68.889% id in 315 aa
NP_879767.1	Similar to Escherichia coli sulfate transport ATP-binding protein CysA or B2422 SW:CYSA_ECOLI (P16676) (365 aa) fasta scores: E(): 5.3e-56, 56.190% id in 315 aa, and to Cucumis sativus hypothetical 39.3 kDa protein TR:Q9G4F5 (EMBL:AF285185) (350 aa) fasta scores: E(): 7e-85, 88.929% id in 280 aa
NP_879768.1	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP
NP_879769.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa0069 TR:Q9I763 (EMBL:AE004446) (352 aa) fasta scores: E(): 3.3e-66, 56.818% id in 308 aa, and to Rhizobium meliloti hypothetical protein Smc00866 TR:CAC45412 (EMBL:AL591785) (385 aa) fasta scores: E(): 6.7e-62, 45.170% id in 383 aa
NP_879770.1	no significant database matches
NP_879771.1	Similar to Streptomyces coelicolor  integral membrane protein Sce87.15C TR:Q9RKC3 (EMBL:AL132674) (281 aa) fasta scores: E(): 4.3e-14, 29.537% id in 281 aa, and to Rhizobium loti Mll3062 protein Mll3062 TR:Q98H24 (EMBL:AP003001) (281 aa) fasta scores: E(): 1.9e-18, 31.849% id in 292 aa
NP_879772.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
NP_879773.1	Similar to Caulobacter crescentus MutT/NudiX family protein Cc0407 TR:Q9AB27 (EMBL:AE005713) (216 aa) fasta scores: E(): 6.1e-27, 47.959% id in 196 aa, and to Rhizobium loti Mll2727 protein mll2727 TR:Q98HS8 (EMBL:AP003000) (204 aa) fasta scores: E(): 4e-24, 42.640% id in 197 aa
NP_879774.1	Similar to Pseudomonas aeruginosa probable oxidoreductase Pa4434 TR:Q9HVY1 (EMBL:AE004857) (345 aa) fasta scores: E(): 1.1e-83, 61.318% id in 349 aa, and to Vibrio cholerae oxidoreductase Tas, aldo/keto reductase family Vc0667 TR:Q9KU57 (EMBL:AE004153) (352 aa) fasta scores: E(): 1.6e-81, 60.172% id in 349 aa
NP_879776.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa5357 TR:Q9HTK1 (EMBL:AE004947) (178 aa) fasta scores: E(): 3.5, 35.519% id in 183 aa, and to Pseudomonas putida hypothetical 20.6 kDa protein TR:Q9FD32 (EMBL:AF292094) (182 aa) fasta scores: E(): 2.3, 34.884% id in 172 aa
NP_879777.1	Similar to Caulobacter crescentus RNA pseudouridylate synthase,  Cc0855 TR:Q9A9V6 (EMBL:AE005762) (255 aa) fasta scores: E(): 5.2e-38, 49.587% id in 242 aa, and to Neisseria meningitidis RNA-binding protein Nma1016 TR:Q9JV32 (EMBL:AL162754) (252 aa) fasta scores: E(): 1e-57, 66.116% id in 242 aa
NP_879778.1	Similar to Rhizobium meliloti  LysR-family transcriptional regulator Sma1602 TR:AAK65531 (EMBL:AE007274) (302 aa) fasta scores: E(): 3.4e-51, 51.020% id in 294 aa, and to Pseudomonas aeruginosa probable transcriptional regulator Pa3135 TR:Q9HZ90 (EMBL:AE004737) (306 aa) fasta scores: E(): 4.3e-30, 39.322% id in 295 aa
NP_879779.1	Similar to Escherichia coli acriflavine resistance protein B AcrB or AcrE or B0462 SW:ACRB_ECOLI (P31224) (1049 aa) fasta scores: E(): 0, 67.143% id in 1050 aa, and to Pseudomonas aeruginosa multidrug resistance protein MexB or Pa0426 SW:MEXB_PSEAE (P52002) (1046 aa) fasta scores: E(): 0, 71.539% id in 1033 aa
NP_879780.1	Similar to Escherichia coli probable outer membrane lipoprotein CusC precursor CusC or IbeB or B0572 SW:CUSC_ECOLI (P77211) (457 aa) fasta scores: E(): 4.9e-38, 39.655% id in 464 aa, and to Pseudomonas aeruginosa outer membrane protein OprM precursor OprM or OprK or Pa0427 SW:OPRM_PSEAE (Q51487) (485 aa) fasta scores: E(): 5.3e-67, 55.717% id in 481 aa
NP_879781.1	Similar to Rhizobium meliloti hypothetical protein Sma1766 TR:AAK65633 (EMBL:AE007284) (83 aa) fasta scores: E(): 3.7e-12, 52.439% id in 82 aa, and to Pseudomonas aeruginosa hypothetical protein Pa5424 TR:Q9HTE0 (EMBL:AE004955) (81 aa) fasta scores: E(): 2.6e-11, 51.250% id in 80 aa
NP_879782.1	Similar to Neisseria meningitidis  lipoprotein Nma1767 TR:Q9JTI0 (EMBL:AL162757) (217 aa) fasta scores: E(): 1.6e-19, 39.490% id in 157 aa, and to Caulobacter crescentus Sco1/2 family protein Cc3503 TR:Q9A2Q3 (EMBL:AE006008) (190 aa) fasta scores: E(): 6.8e-18, 37.173% id in 191 aa
NP_879783.1	Similar to Escherichia coli oligopeptidase A PrlC or OpdA or B3498 SW:OPDA_ECOLI (P27298) (680 aa) fasta scores: E(): 7.2e-123, 46.009% id in 689 aa, and to Xylella fastidiosa oligopeptidase A Xf0127 TR:Q9PH19 (EMBL:AE003866) (674 aa) fasta scores: E(): 2.1e-134, 54.839% id in 682 aa
NP_879784.1	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate
NP_879785.1	Similar to Bradyrhizobium japonicum transcriptional regulatory protein FixJ SW:FIXJ_BRAJA (P23221) (205 aa) fasta scores: E(): 3e-26, 41.146% id in 192 aa, and to Pseudomonas sp transcriptional activator StdR TR:O50213 (EMBL:AF031161) (207 aa) fasta scores: E(): 1.2e-27, 47.644% id in 191 aa
NP_879786.1	Similar to Azorhizobium caulinodans sensor protein FixL SW:FIXL_AZOCA (P26489) (504 aa) fasta scores: E(): 1.7e-37, 47.893% id in 261 aa, and to Caulobacter crescentus sensory box histidine kinase FixL Cc0759 TR:Q9AA47 (EMBL:AE005751) (504 aa) fasta scores: E(): 2.4e-35, 45.059% id in 253 aa
NP_879787.1	E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC
NP_879788.1	Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA
NP_879789.1	Similar to Escherichia coli dihydrolipoamide dehydrogenase LpdA or Lpd or B0116 or Z0126 or ecs0120 SW:DLDH_ECOLI (P00391) (473 aa) fasta scores: E(): 7.8e-97, 63.713% id in 474 aa, and to Alcaligenes eutrophus dihydrolipoamide dehydrogenase PdhL TR:Q59099 (EMBL:U09865) (594 aa) fasta scores: E(): 4.8e-147, 75.541% id in 601 aa
NP_879790.1	structural flagella protein
NP_879791.1	transposase for IS481 element
NP_879792.1	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
NP_879793.1	catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase
NP_879794.1	Similar to Pseudomonas aeruginosa glyceraldehyde 3-phosphate dehydrogenase Gap or HexC or pa3195 SWALL:G3P_PSEAE (SWALL:P27726) (334 aa) fasta scores: E(): 9.1e-84, 66.07% id in 336 aa, and to Alcaligenes eutrophus glyceraldehyde 3-phosphate dehydrogenase, plasmid cbbgP SWALL:G3PP_ALCEU (SWALL:P50322) (336 aa) fasta scores: E(): 1.1e-107, 84.52% id in 336 aa
NP_879795.1	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway
NP_879796.1	Catalyzes a key regulatory step in fatty acid biosynthesis
NP_879797.1	AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA
NP_879798.1	catalyzes the formation of acetyl phosphate from acetyl-CoA and phosphate; can also act with other short-chain acyl-CoAs
NP_879799.1	Similar to Rhizobium meliloti hypothetical 80.6 kDa protein in ackA 5'region SW:YACK_RHIME (Q9X447) (733 aa) fasta scores: E(): 4.3e-155, 56.428% id in 739 aa
NP_879800.1	Similar to Escherichia coli hypothetical Gst-like protein YfcF or B2301 SW:YFCF_ECOLI (P77544) (214 aa) fasta scores: E(): 1e-33, 52.683% id in 205 aa, and to Pseudomonas aeruginosa probable glutathione S-transferase Pa4401 TR:Q9HW05 (EMBL:AE004855) (211 aa) fasta scores: E(): 5.6e-08, 31.905% id in 210 aa
NP_879801.1	Similar to Bacillus subtilis DinB protein DinB SW:DINB_BACSU (Q02886) (172 aa) fasta scores: E(): 0.0003, 28.571% id in 161 aa, and to Rhizobium meliloti conserved hypothetical protein Smc00593 TR:CAC45741 (EMBL:AL591786) (170 aa) fasta scores: E(): 4.6e-09, 38.554% id in 166 aa
NP_879802.1	Similar to Synechocystis sp hypothetical 19.4 kDa protein Slr1340 TR:P74076 (EMBL:D90912) (178 aa) fasta scores: E(): 9.8e-35, 55.346% id in 159 aa, and to Anabaena sp  acetyltransferase TR:Q9KHE3 (EMBL:AF262218) (164 aa) fasta scores: E(): 2.3e-07, 31.111% id in 135 aa
NP_879803.1	Similar to Escherichia coli curved DNA-binding protein CbpA or B1000 SW:CBPA_ECOLI (P36659) (306 aa) fasta scores: E(): 2.9e-26, 41.772% id in 316 aa, and to Caulobacter crescentus DnaJ family protein cc2772 TR:Q9A4Q8 (EMBL:AE005942) (314 aa) fasta scores: E(): 4.2e-31, 41.742% id in 333 aa
NP_879804.1	Similar to Thermus thermophilus dnaK operon DafA TR:P77527 (EMBL:Y07826) (78 aa) fasta scores: E(): 0.93, 38.776% id in 49 aa, and to Rhizobium meliloti hypothetical 13.0 kDa protein Sma0117 TR:AAK64718 (EMBL:AE007200) (112 aa) fasta scores: E(): 0.48, 39.706% id in 68 aa
NP_879805.1	Similar to Escherichia coli low-affinity inorganic phosphate transporter 1 PitA or Pit or B3493 or Z4893 or Ecs4365 SW:PITA_ECOLI (P37308) (499 aa) fasta scores: E(): 1.3e-66, 57.085% id in 494 aa, and to Pseudomonas aeruginosa probable phosphate transporter pa4292 TR:Q9HWA8 (EMBL:AE004845) (489 aa) fasta scores: E(): 2e-152, 80.493% id in 487 aa
NP_879806.1	forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis
NP_879807.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa2759 TR:Q9I084 (EMBL:AE004704) (104 aa) fasta scores: E(): 1.1, 27.027% id in 111 aa
NP_879808.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3787 TR:Q9HXK8 (EMBL:AE004797) (282 aa) fasta scores: E(): 1.9e-72, 68.978% id in 274 aa, and to Xylella fastidiosa hypothetical protein Xf0987 TR:Q9PEP1 (EMBL:AE003937) (285 aa) fasta scores: E(): 5.5e-25, 38.462% id in 247 aa
NP_879809.1	no significant database matches
NP_879810.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
NP_879811.1	transposase for IS481 element
NP_879812.1	Similar to Escherichia coli RNA polymerase sigma factor for flagellar operon FliA or FlaD or B1922 or Z3012 or Ecs2661 SW:FLIA_ECOLI (P31804) (239 aa) fasta scores: E(): 9.2e-37, 52.466% id in 223 aa, and to Yersinia enterocolitica RNA polymerase sigma factor for flagellar operon FliA SW:FLIA_YEREN (P52621) (230 aa) fasta scores: E(): 1.1e-38, 52.402% id in 229 aa
NP_879813.1	with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems
NP_879814.1	With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems
NP_879815.1	With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine
NP_879816.1	with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine
NP_879817.1	Similar to Escherichia coli chemotaxis protein CheA or B1888 SW:CHEA_ECOLI (P07363) (654 aa) fasta scores: E(): 8.2e-86, 61.21% id in 673 aa, and to Salmonella typhimurium chemotaxis protein CheA SW:CHEA_SALTY (P09384) (671 aa) fasta scores: E(): 9.8e-94, 62.16% id in 674 aa
NP_879818.1	Similar to Escherichia coli chemotaxis protein CheW or B1887 or Z2941 or Ecs2597 SW:CHEW_ECOLI (P07365) (167 aa) fasta scores: E(): 1.3e-41, 74.83% id in 155 aa, and to Burkholderia pseudomallei (Pseudomonas pseudomallei) chemotaxis protein CheW TR:O05183 (EMBL:U92493) (175 aa) fasta scores: E(): 7e-43, 72.56% id in 164 aa
NP_879819.1	Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or B4355 SW:MCP1_ECOLI (P02942) (551 aa) fasta scores: E(): 3e-64, 46.71% id in 533 aa, and to Salmonella typhimurium methyl-accepting chemotaxis protein II TaR SW:MCP2_SALTY (P02941) (553 aa) fasta scores: E(): 1.2e-63, 45.87% id in 558 aa. Also similar to BP1384 (64.476% identity in 563 aa overlap), BP1385 (61.649% identity in 558 aa overlap), BP2268 (56.415% identity in 491 aa overlap), and to BP1591 (44.216% identity in 536 aa overlap)
NP_879820.1	regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins
NP_879821.1	Similar to Escherichia coli chemotaxis protein CheY or B1882 or Z2936 or Ecs2592 TR:AAG56872 (EMBL:K02175) (129 aa) fasta scores: E(): 5.1e-36, 78.73% id in 127 aa, and to Burkholderia pseudomallei (Pseudomonas pseudomallei) CheY TR:P94342 (EMBL:U78087) (131 aa) fasta scores: E(): 1.9e-37, 80.31% id in 127 aa
NP_879822.1	cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation
NP_879823.1	Similar to Neisseria meningitidis invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter spSE19 pilin inverting protein ChnY TR:Q9F7E1 (EMBL:AF282240) (324 aa) fasta scores: E(): 8.2e-50, 47.516% id in 322 aa
NP_879824.1	Similar to Rhizobium meliloti  aldoketo reductase Smb20500 TR:CAC48882 (EMBL:AL603643) (331 aa) fasta scores: E(): 7.8e-35, 39.26% id in 326 aa, and to Agrobacterium tumefaciens Agr_l_1936p TR:AAK89542 (EMBL:AE008296) (332 aa) fasta scores: E(): 2e-31, 36.44% id in 332 aa
NP_879825.1	Similar to Salmonella typhimurium magnesium and cobalt efflux protein CorC SW:CORC_SALTY (Q9R874) (292 aa) fasta scores: E(): 7.9e-39, 40.95% id in 293 aa, and to Neisseria meningitidis hypothetical protein Nma0716 TR:Q9JVS6 (EMBL:AL162754) (274 aa) fasta scores: E(): 1.5e-43, 46.44% id in 267 aa
NP_879826.1	Similar to Xylella fastidiosa hypothetical protein Xf0903 TR:Q9PEX5 (EMBL:AE003930) (161 aa) fasta scores: E(): 2.1e-19, 45.8% id in 155 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3982 TR:Q9HX37 (EMBL:AE004816) (160 aa) fasta scores: E(): 6.9e-18, 46.35% id in 151 aa
NP_879827.1	Similar to Escherichia coli PhoH-like protein YbeZ or B0660 or Z0809 or Ecs0698 SW:PHOL_ECOLI (P77349) (359 aa) fasta scores: E(): 2.6e-60, 54.74% id in 316 aa, and to Salmonella typhimurium YbeZ protein TR:Q9RCI1 (EMBL:AJ249116) (361 aa) fasta scores: E(): 1.8e-60, 52.94% id in 340 aa
NP_879828.1	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)
NP_879829.1	Similar to Neisseria meningitidis invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter spSE19. pilin inverting protein ChnY TR:Q9F7E1 (EMBL:AF282240) (324 aa) fasta scores: E(): 8.2e-50, 47.516% id in 322 aa
NP_879830.1	forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF
NP_879831.1	part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane
NP_879832.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3822 TR:Q9HXI0 (EMBL:AE004799) (112 aa) fasta scores: E(): 1.2e-14, 48.27% id in 116 aa, and to Escherichia coli hypothetical protein YajC or B0407 or Z0506 or Ecs0458 SW:YAJC_ECOLI (P19677) (110 aa) fasta scores: E(): 6.2e-14, 45.28% id in 106 aa
NP_879833.1	transposase for IS481 element
NP_879834.1	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)
NP_879835.1	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step
NP_879836.1	Similar to Escherichia coli penicillin-binding protein 4 precursor DacB or B3182 SW:PBP4_ECOLI (P24228) (477 aa) fasta scores: E(): 2.5e-21, 29.19% id in 435 aa, and to Pseudomonas aeruginosa probable D-alanyl-D-alanine carboxypeptidase Pa3047 TR:Q9HZG1 (EMBL:AE004729) (476 aa) fasta scores: E(): 4.4e-57, 40.21% id in 470 aa
NP_879837.1	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate
NP_879838.1	Similar to Neisseria meningitidis invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter spSE19. pilin inverting protein ChnY TR:Q9F7E1 (EMBL:AF282240) (324 aa) fasta scores: E(): 8.2e-50, 47.516% id in 322 aa
NP_879839.1	Identical to the previously sequenced Bordetella pertussis pertactin precursor Prn or Omp69A SW:PERT_BORPE (P14283) (910 aa) fasta scores: E(): 0, 100% id in 910 aa, and to Bordetella bronchiseptica pertactin precursor Prn SW:PERT_BORBR (Q03035) (911 aa) fasta scores: E(): 1.4e-160, 91.31% id in 921 aa
NP_879840.1	Similar to Escherichia coli siroheme synthase CysG or B3368 or Z4729 or Ecs4219 SW:CYSG_ECOLI (P11098) (457 aa) fasta scores: E(): 5.7e-77, 49.56% id in 462 aa, and to Xylella fastidiosa siroheme synthase Xf0832 TR:Q9PF46 (EMBL:AE003922) (476 aa) fasta scores: E(): 2e-95, 60% id in 470 aa
NP_879841.1	Weakly similar to Bacteriophage Mx8 p64 TR:AAK94399 (EMBL:AF396866) (357 aa) fasta scores: E(): 6.6, 25.54% id in 137 aa
NP_879842.1	Similar to Escherichia coli ElaB protein ElaB or B2266 or Z3526 or Ecs3154 SW:ELAB_ECOLI (P52084) (101 aa) fasta scores: E(): 1.1e-06, 35.86% id in 92 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3040 TR:Q9HZG8 (EMBL:AE004729) (109 aa) fasta scores: E(): 5.6e-10, 39.45% id in 109 aa
NP_879843.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3041 TR:Q9HZG7 (EMBL:AE004729) (126 aa) fasta scores: E(): 0.00021, 34.48% id in 116 aa
NP_879844.1	Weakly similar to Synechocystis sp hypothetical 23.9 kDa protein Slr1949 TR:P74511 (EMBL:D90915) (212 aa) fasta scores: E(): 8.6, 22.85% id in 140 aa
NP_879845.1	Similar to Escherichia coli 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD or B3843 SW:UBID_ECOLI (P26615) (497 aa) fasta scores: E(): 2.7e-65, 68.15% id in 515 aa, and to Neisseria meningitidis 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD or Nmb1694 SW:UBID_NEIMB (Q9JY86) (494 aa) fasta scores: E(): 4.6e-70, 70.68% id in 515 aa
NP_879846.1	Similar to Neisseria meningitidis  transglycosylase Nma1674 TR:Q9JTQ7 (EMBL:AL162756) (207 aa) fasta scores: E(): 0.017, 30.05% id in 193 aa, and to Caulobacter crescentus transglycosylase,  Cc2416 TR:Q9A5N1 (EMBL:AE005911) (218 aa) fasta scores: E(): 0.034, 31.32% id in 166 aa
NP_879847.1	Similar to Thermus aquaticus aspartate aminotransferase AspC SW:AAT_THETH (Q56232) (385 aa) fasta scores: E(): 9.9e-32, 34.27% id in 388 aa, and to Pseudomonas aeruginosa probable aminotransferase Pa4722 TR:Q9HV76 (EMBL:AE004885) (390 aa) fasta scores: E(): 7e-65, 47.89% id in 380 aa
NP_879848.1	Similar to Mycobacterium tuberculosis hypothetical 27.6 kDa protein Rv1249c or Mtv006.21C TR:O50464 (EMBL:AL021006) (262 aa) fasta scores: E(): 0.28, 33.92% id in 168 aa, and to Streptomyces coelicolor hypothetical 37.5 kDa protein Scbac19f3.03C TR:CAC44326 (EMBL:AL596102) (377 aa) fasta scores: E(): 4, 28.98% id in 314 aa
NP_879849.1	NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate
NP_879850.1	Similar to Xylella fastidiosa hypothetical protein Xf2616 TR:Q9PAA2 (EMBL:AE004068) (138 aa) fasta scores: E(): 0.34, 27.92% id in 111 aa
NP_879851.1	transposase for IS481 element
NP_879852.1	ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation
NP_879853.1	Similar to Escherichia coli phosphate transport system permease PstA or PhoT or B3726 SW:PSTA_ECOLI (P07654) (296 aa) fasta scores: E(): 1.8e-60, 58.45% id in 272 aa, and to Pasteurella multocida PstA or Pm0434 TR:Q9CNJ6 (EMBL:AE006079) (280 aa) fasta scores: E(): 7.7e-74, 72% id in 275 aa
NP_879854.1	Similar to Escherichia coli phosphate transport system permease PstC or PhoW or B3727 or Z5218 or Ecs4663 SW:PSTC_ECOLI (P07653) (319 aa) fasta scores: E(): 9.9e-70, 64.56% id in 302 aa, and to Pasteurella multocida PstC or Pm0435 TR:Q9CNJ5 (EMBL:AE006079) (320 aa) fasta scores: E(): 1.4e-82, 71.33% id in 307 aa
NP_879855.1	Similar to Escherichia coli phosphate-binding periplasmic protein precursor PstS or PhoS or B3728 SW:PSTS_ECOLI (P06128) (346 aa) fasta scores: E(): 1.2e-71, 56.67% id in 337 aa, and to Pasteurella multocida PstS or Pm0436 TR:Q9CNJ4 (EMBL:AE006079) (403 aa) fasta scores: E(): 1.3e-89, 69.97% id in 333 aa
NP_879856.1	catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate
NP_879857.1	Similar to Escherichia coli, and exopolyphosphatase Ppx or B2502 or Z3765 or Ecs3364 SW:PPX_ECOLI (P29014) (512 aa) fasta scores: E(): 1.8e-68, 40.88% id in 499 aa, and to Neisseria meningitidis exopolyphosphatase Nmb1467 TR:Q9JYR3 (EMBL:AE002496) (502 aa) fasta scores: E(): 1.2e-86, 47.18% id in 498 aa
NP_879858.1	Similar to Streptomyces coelicolor hypothetical 28.0 kDa protein Scm10.09C TR:Q9RCY9 (EMBL:AL133469) (256 aa) fasta scores: E(): 7.9e-44, 50% id in 250 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4350 TR:Q9HW51 (EMBL:AE004851) (251 aa) fasta scores: E(): 2.3e-37, 43.9% id in 246 aa
NP_879859.1	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NP_879860.1	Similar to Escherichia coli dihydropteroate synthase FolP or DhpS or B3177 SW:DHPS_ECOLI (P26282) (282 aa) fasta scores: E(): 2.1e-44, 48.47% id in 262 aa, and to Pseudomonas aeruginosa dihydropteroate synthase FolP or Pa4750 TR:Q9HV49 (EMBL:AE004888) (283 aa) fasta scores: E(): 4.9e-49, 51.3% id in 269 aa
NP_879861.1	Similar to Escherichia coli cell division protein FtsH or HflB or MrsC or TolZ or B3178 SW:FTSH_ECOLI (P28691) (644 aa) fasta scores: E(): 1.2e-139, 64.32% id in 611 aa, and to Neisseria meningitidis cell division protein FtsH or Nmb0798 TR:Q9K027 (EMBL:AE002433) (655 aa) fasta scores: E(): 2.7e-144, 66.28% id in 608 aa
NP_879862.1	Similar to Escherichia coli ribosomal RNA large subunit methyltransferase J RrmJ or FtsJ or MrsF or B3179 or Z4541 or Ecs4058 SW:RRMJ_ECOLI (P28692) (209 aa) fasta scores: E(): 1.1e-30, 46.07% id in 204 aa, and to Neisseria meningitidis  cell division protein FtsJ or Nma1008 or Nmb0799 TR:Q9JQX5 (EMBL:AL162754) (206 aa) fasta scores: E(): 1.3e-39, 53.39% id in 206 aa
NP_879863.1	Its N-terminal region is similar to Neisseria meningitidis hypothetical protein Nmb0800 TR:Q9K026 (EMBL:AE002433) (94 aa) fasta scores: E(): 2.7e-09, 47.87% id in 94 aa, and to Escherichia coli hypothetical protein YhbY or B3180 or Z4542 or Ecs4059 SW:YHBY_ECOLI (P42550) (97 aa) fasta scores: E(): 1.1e-07, 46.59% id in 88 aa
NP_879864.1	transposase for IS481 element
NP_879865.1	no significant database matches
NP_879866.1	catalyzes the formation of O-phospho-L-homoserine from L-homoserine
NP_879867.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa2795 TR:Q9I048 (EMBL:AE004707) (332 aa) fasta scores: E(): 4.8e-62, 54.25% id in 317 aa, and to Neisseria meningitidis hypothetical protein Nma2139 TR:Q9JST8 (EMBL:AL162758) (336 aa) fasta scores: E(): 5.6e-62, 51.54% id in 324 aa
NP_879868.1	transposase for IS481 element
NP_879869.1	Similar to Mycobacterium tuberculosis hypothetical 15.1 kDa protein Rv2406c or Mtcy253.14 TR:P71737 (EMBL:Z81368) (142 aa) fasta scores: E(): 1.6e-11, 26.61% id in 139 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0250 TR:Q9I6N9 (EMBL:AE004463) (144 aa) fasta scores: E(): 5e-10, 33.09% id in 142 aa
NP_879870.1	Its N-terminal region is similar to Escherichia coli ribonuclease BN rbn or B3886 or Z5425 or Ecs4809 SW:RBN_ECOLI (P32146) (290 aa) fasta scores: E(): 1.8e-33, 39.2% id in 250 aa, and to Neisseria meningitidis ribonuclease BN,  Nmb0524 TR:Q9K0R0 (EMBL:AE002408) (406 aa) fasta scores: E(): 1.2e-36, 36.36% id in 396 aa
NP_879871.1	Similar to Neisseria meningitidis hypothetical protein Nma0801 TR:Q9JVK4 (EMBL:AL162754) (117 aa) fasta scores: E(): 1.1e-13, 45.45% id in 99 aa, and to Vibrio cholerae hypothetical protein Vc2167 TR:Q9KQ37 (EMBL:AE004288) (145 aa) fasta scores: E(): 0.00097, 31.13% id in 106 aa
NP_879872.1	Similar to Escherichia coli hypothetical protein YdiU or B1706 SW:YDIU_ECOLI (P77649) (478 aa) fasta scores: E(): 1.9e-77, 48.33% id in 480 aa, and to Pseudomonas aeruginosa hypothetical protein Pa5023 TR:Q9HUE6 (EMBL:AE004915) (486 aa) fasta scores: E(): 1.1e-76, 46.15% id in 494 aa
NP_879873.1	Similar to Rhodobacter sphaeroides DmsO/TmaO-response regulator DorR TR:O30741 (EMBL:AF016236) (232 aa) fasta scores: E(): 8.7e-18, 33.76% id in 234 aa, and to Pseudomonas aeruginosa probable two-component response regulator Pa4983 TR:Q9HUI2 (EMBL:AE004911) (244 aa) fasta scores: E(): 2.2e-17, 33.33% id in 243 aa
NP_879874.1	Similar to Escherichia coli sensor protein KdpD or B0695 SW:KDPD_ECOLI (P21865) (894 aa) fasta scores: E(): 6.1e-11, 30.9% id in 233 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1433 TR:Q9I3R4 (EMBL:AE004573) (650 aa) fasta scores: E(): 2.9e-27, 24.77% id in 654 aa
NP_879875.1	transposase for IS481 element
NP_879876.1	Similar to Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivG or B3455 or Z4825 or Ecs4302 SW:LIVG_ECOLI (P22730) (255 aa) fasta scores: E(): 7e-31, 41.73% id in 254 aa, and to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraF or Pa1071 SW:BRAF_PSEAE (P21629) (255 aa) fasta scores: E(): 3.5e-34, 45.85% id in 253 aa
NP_879877.1	Similar to Escherichia coli high-affinity branched-chain amino acid transport system permease LivH or B3457 SW:LIVH_ECOLI (P08340) (308 aa) fasta scores: E(): 4.1e-17, 33.88% id in 304 aa, and to Salmonella typhimurium high-affinity branched-chain amino acid transport system permease LivH or LivA SW:LIVH_SALTY (P30295) (308 aa) fasta scores: E(): 3.9e-18, 35.19% id in 304 aa
NP_879878.1	Due to a possible large deletion event immediately upstream, this CDS may be lacking part of its amino terminal region. Similar to Escherichia coli leucine-specific binding protein precursor LivK or B3458 SW:LIVK_ECOLI (P04816) (369 aa) fasta scores: E(): 1.2e-09, 23.1% id in 329 aa, and to Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC or pa1074 SW:BRAC_PSEAE (P21175) (373 aa) fasta scores: E(): 3.5e-10, 22.74% id in 321 aa
NP_879879.1	Similar to Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivF or B3454 SW:LIVF_ECOLI (P22731) (237 aa) fasta scores: E(): 1.2e-26, 43.75% id in 240 aa, and to Rhizobium loti ABC transporter ATP-binding protein Mlr5224 TR:Q98CB2 (EMBL:AP003006) (268 aa) fasta scores: E(): 2.1e-38, 51.41% id in 247 aa
NP_879880.1	Similar to Vibrio cholerae long-chain-fatty-acid--CoA ligase,  Vc2484 TR:Q9KP89 (EMBL:AE004318) (601 aa) fasta scores: E(): 2e-51, 31.82% id in 597 aa, and to Aeropyrum pernix 651aa long hypothetical long-chain-fatty-acid--CoA ligase Ape1307 TR:Q9YCF0 (EMBL:AP000061) (651 aa) fasta scores: E(): 5.9e-68, 34.65% id in 629 aa
NP_879881.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa2885 TR:Q9HZW2 (EMBL:AE004714) (198 aa) fasta scores: E(): 3.9e-24, 45.45% id in 176 aa, and to Pseudomonas fluorescens  transcriptional regulator Pfi2 TR:Q9RFR4 (EMBL:AF173683) (207 aa) fasta scores: E(): 6.4e-23, 43.88% id in 180 aa
NP_879882.1	no significant database matches
NP_879883.1	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1
NP_879884.1	Similar to Homo sapiens sepiapterin reductase Spr SW:SPRE_HUMAN (P35270) (261 aa) fasta scores: E(): 2.1e-15, 38.4% id in 250 aa, and to Bacillus subtilis YueD protein TR:O32099 (EMBL:Z99120) (243 aa) fasta scores: E(): 1.1e-20, 36.25% id in 251 aa
NP_879885.1	recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1
NP_879886.1	Similar to Escherichia coli single-stranded-DNA-specific exonuclease RecJ or B2892 SW:RECJ_ECOLI (P21893) (577 aa) fasta scores: E(): 2.1e-86, 46.6% id in 575 aa, and to Neisseria meningitidis single-stranded-DNA-specific exonuclease RecJ or Nma1052 TR:Q9JV09 (EMBL:AL162755) (566 aa) fasta scores: E(): 3.2e-110, 54.32% id in 567 aa
NP_879887.1	Similar to Xanthomonas campestris regulatory protein RpfE TR:Q9L4D4 (EMBL:AJ245997) (306 aa) fasta scores: E(): 6e-10, 30.59% id in 317 aa, and to Xylella fastidiosa hypothetical protein Xf1109 TR:Q9PEB9 (EMBL:AE003946) (293 aa) fasta scores: E(): 1.2e-06, 29.06% id in 234 aa
NP_879888.1	Similar to Escherichia coli lipoprotein releasing system transmembrane protein LolE or B1118 SW:LOLE_ECOLI (P75958) (413 aa) fasta scores: E(): 1.4e-42, 36.27% id in 408 aa, and to Escherichia coli lipoprotein releasing system transmembrane protein LolC or B1116 or Z1757 or Ecs1494 SW:LOLC_ECOLI (P75956) (399 aa) fasta scores: E(): 2.7e-22, 34.86% id in 413 aa
NP_879889.1	Similar to Escherichia coli lipoprotein releasing system ATP-binding protein LolD or B1117 SW:LOLD_ECOLI (P75957) (233 aa) fasta scores: E(): 1e-39, 57.79% id in 218 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter Pa2987 TR:Q9HZL7 (EMBL:AE004724) (227 aa) fasta scores: E(): 1.1e-38, 57.14% id in 224 aa
NP_879890.1	Similar to Escherichia coli  deoxyribonuclease YjjV or B4378 SW:YJJV_ECOLI (P39408) (259 aa) fasta scores: E(): 7.3e-29, 42.06% id in 252 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3564 TR:Q9HY53 (EMBL:AE004777) (225 aa) fasta scores: E(): 1.2e-25, 40.62% id in 224 aa
NP_879891.1	Similar to Pseudomonas tolaasii serine protease EprS TR:O87811 (EMBL:AJ007828) (985 aa) fasta scores: E(): 1.1e-18, 25% id in 1060 aa, and to Serratia marcescens Ssp-h1 TR:Q54483 (EMBL:D78380) (1036 aa) fasta scores: E(): 9.3e-26, 27.08% id in 1067 aa
NP_879892.1	no significant database matches
NP_879893.1	Similar to Bordetella bronchiseptica  outer membrane ligand binding protein BipA TR:Q9APE8 (EMBL:AF304006) (1578 aa) fasta scores: E(): 0, 79.75% id in 1576 aa, and to Escherichia coli O157:H7 EDL933 adhesin EaeH TR:AAG54632 (EMBL:AE005207) (1417 aa) fasta scores: E(): 1.6e-17, 23.88% id in 1390 aa. Also similar to BP3204, 41.856% identity (43.284% ungapped) in 970 aa overlap.
NP_879894.1	Similar to Acidovorax spSA1 D-(-)-3-hydroxybutyrate oligomer hydrolase TR:Q9F1T8 (EMBL:AB044565) (291 aa) fasta scores: E(): 2.2e-10, 35.92% id in 309 aa, and to Rickettsia prowazekii hypothetical 33.7 kDa protein Rp444 TR:Q9ZD98 (EMBL:AJ235271) (293 aa) fasta scores: E(): 3.4e-10, 28.42% id in 292 aa
NP_879895.1	Similar to Salmonella typhimurium protein TrpH SW:TRPH_SALTY (O54453) (289 aa) fasta scores: E(): 1.8e-32, 39.78% id in 274 aa, and to Neisseria meningitidis hypothetical protein Nmb1824 TR:Q9JXZ5 (EMBL:AE002531) (278 aa) fasta scores: E(): 3e-45, 50.18% id in 271 aa
NP_879896.1	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NP_879897.1	transposase for IS481 element
NP_879898.1	Previously sequenced as Bordetella pertussis serotype 2 fimbrial subunit precursor Fim2 SW:FM2_BORPE (P05788) (207 aa) fasta scores: E(): 1.6e-76, 100% id in 207 aa, and highly similar to Bordetella bronchiseptica fimbrial subunit precursor Fim2 TR:Q44885 (EMBL:X74119) (208 aa) fasta scores: E(): 1.9e-55, 71.63% id in 208 aa, and to Bordetella bronchiseptica fimbrial subunit protein FimN TR:Q9F8W4 (EMBL:AF231910) (209 aa) fasta scores: E(): 2e-42, 62.43% id in 205 aa. Also similar to BP2674 (57.619% identity in 210 aa overlap), and to BP1568 (56.338% identity in 213 aa overlap)
NP_879899.1	NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate
NP_879900.1	paralogs to the E1 component of pyruvate dehydrogenase subunit E1
NP_879901.1	Similar to Escherichia coli leucine-responsive regulatory protein Lrp or AlsB or LivR or Ihb or OppI or B0889 SW:LRP_ECOLI (P19494) (163 aa) fasta scores: E(): 1.8e-21, 41.29% id in 155 aa, and to Pseudomonas putida bkd operon transcriptional regulator BkdR SW:BKDR_PSEPU (P42179) (161 aa) fasta scores: E(): 2.6e-32, 61.33% id in 150 aa
NP_879902.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3934 TR:Q9HX82 (EMBL:AE004811) (678 aa) fasta scores: E(): 1.7e-151, 66.22% id in 678 aa, and to Neisseria meningitidis  integral membrane protein Nma0207 TR:Q9JWW6 (EMBL:AL162752) (672 aa) fasta scores: E(): 4e-127, 56.58% id in 668 aa
NP_879903.1	SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide
NP_879904.1	component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA
NP_879905.1	E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide
NP_879906.1	Similar to Alcaligenes eutrophus odhA, odhB, odhL, orf1 and orf5 genes TR:Q44029 (EMBL:X91877) (186 aa) fasta scores: E(): 5e-56, 77.83% id in 185 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4438 pa4438 TR:Q9HVX7 (EMBL:AE004858) (364 aa) fasta scores: E(): 1e-64, 49.31% id in 363 aa
NP_879907.1	Similar to Escherichia coli 3-oxoacyl-[acyl-carrier protein] reductase FabG or B1093 SW:FABG_ECOLI (P25716) (244 aa) fasta scores: E(): 6e-23, 38.73% id in 253 aa, and to Pseudomonas aeruginosa 3-oxoacyl-[acyl-carrier protein] reductase FabG or Pa2967 SW:FABG_PSEAE (O54438) (247 aa) fasta scores: E(): 5.2e-25, 40.07% id in 252 aa
NP_879908.1	Similar to Frateuria spANA-18 regulator of cat2 gene cluster OrfR2 TR:Q9Z9Y2 (EMBL:AB009373) (295 aa) fasta scores: E(): 3.1e-30, 37.96% id in 295 aa, and to Deinococcus radiodurans transcriptional regulator, LysR family dr0615 TR:Q9RWQ1 (EMBL:AE001919) (317 aa) fasta scores: E(): 1.4e-31, 39.35% id in 310 aa
NP_879909.1	transposase for IS481 element
NP_879910.1	Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.2e-52, 46.95% id in 328 aa, and to Agrobacterium tumefaciens Agr_l_312p TR:AAK88723 (EMBL:AE008213) (329 aa) fasta scores: E(): 1.4e-49, 45.39% id in 315 aa
NP_879911.1	Similar to Vibrio harveyi 3-oxoacyl-[acyl-carrier protein] reductase FabG SW:FABG_VIBHA (P55336) (244 aa) fasta scores: E(): 6.5e-16, 40.85% id in 235 aa, and to Pseudomonas aeruginosa probable short-chain dehydrogenase Pa4162 TR:Q9HWL9 (EMBL:AE004832) (238 aa) fasta scores: E(): 4.7e-32, 47.8% id in 228 aa
NP_879912.1	transposase for IS481 element
NP_879913.1	Similar to Escherichia coli probable RNA polymerase sigma factor FecI or B4293 SW:FECI_ECOLI (P23484) (173 aa) fasta scores: E(): 1e-21, 43.82% id in 162 aa, and to Pseudomonas aeruginosa  RNA polymerase sigma factor Pa3899 TR:Q9HXB4 (EMBL:AE004807) (169 aa) fasta scores: E(): 1.9e-31, 54.54% id in 165 aa. Also similar to BP0349, 46.875% identity in 160 aa overlap
NP_879914.1	Similar to Escherichia coli protein FecR or B4292 SW:FECR_ECOLI (P23485) (317 aa) fasta scores: E(): 5.3e-19, 32.17% id in 317 aa, and to Pseudomonas putida pupI and pupR genes PupR TR:Q52209 (EMBL:X77918) (324 aa) fasta scores: E(): 1.3e-28, 37.88% id in 322 aa
NP_879915.1	Similar to Escherichia coli ferrichrome-iron receptor precursor FhuA or TonA or B0150 SW:FHUA_ECOLI (P06971) (747 aa) fasta scores: E(): 4.9e-61, 38.21% id in 717 aa, and to Burkholderia cepacia ornibactin receptor precursor OrbA TR:Q9F480 (EMBL:AF013993) (755 aa) fasta scores: E(): 6.7e-72, 36.05% id in 746 aa
NP_879916.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa0800 TR:Q9I5D8 (EMBL:AE004515) (177 aa) fasta scores: E(): 1.4e-08, 44.82% id in 87 aa
NP_879917.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa0802 TR:Q9I5D6 (EMBL:AE004515) (107 aa) fasta scores: E(): 8.5e-05, 37.25% id in 102 aa
NP_879918.1	transposase for IS481 element
NP_879919.1	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_879920.1	Identical to the previously sequenced Bordetella pertussis Tex protein SW:TEX_BORPE (Q45388) (791 aa) fasta scores: E(): 0, 99.36% id in 791 aa, and to Escherichia coli protein YhgF or B3407 SW:YHGF_ECOLI (P46837) (773 aa) fasta scores: E(): 5.2e-166, 61.35% id in 766 aa
NP_879921.1	Similar to Escherichia coli probable ATP-dependent helicase DinG or RarB or B0799 SW:DING_ECOLI (P27296) (716 aa) fasta scores: E(): 2.1e-27, 30.15% id in 703 aa, and to Escherichia coli probable ATP-dependent helicase YoaA or B1808 SW:YOAA_ECOLI (P76257) (636 aa) fasta scores: E(): 3.1e-41, 40.49% id in 684 aa
NP_879922.1	Similar to Neisseria gonorrhoeae competence lipoprotein ComL precursor SW:COML_NEIGO (Q50985) (267 aa) fasta scores: E(): 2.2e-40, 45.17% id in 259 aa, and to Pseudomonas aeruginosa hypothetical lipoprotein Pa4545 precursor SW:Y9F5_PSEAE (P33641) (341 aa) fasta scores: E(): 1.7e-35, 41.47% id in 258 aa
NP_879923.1	Similar to Escherichia coli ribosomal large subunit pseudouridine synthase D RluD or Sfhb or B2594 SW:RLUD_ECOLI (P33643) (326 aa) fasta scores: E(): 5.1e-40, 44.26% id in 314 aa, and to Neisseria meningitidis ribosomal large subunit pseudouridine synthase D Nmb0704 TR:Q9K0B0 (EMBL:AE002425) (374 aa) fasta scores: E(): 1.1e-45, 46.84% id in 333 aa
NP_879924.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa4543 SW:Y9E3_PSEAE (P33663) (242 aa) fasta scores: E(): 9.1e-33, 49.78% id in 229 aa, and to Escherichia coli hypothetical protein YfiH or B2593 SW:YFIH_ECOLI (P33644) (243 aa) fasta scores: E(): 1.4e-31, 47.61% id in 231 aa
NP_879925.1	Similar to Alcaligenes eutrophus poly-beta-hydroxybutyrate polymerase PhbC SW:PHBC_ALCEU (P23608) (589 aa) fasta scores: E(): 8.2e-129, 58.96% id in 541 aa, and to Burkholderia SpDSMZ 9242. phac TR:Q9RB82 (EMBL:AF153086) (625 aa) fasta scores: E(): 1.6e-124, 55.78% id in 545 aa
NP_879926.1	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
NP_879927.1	Similar to Alcaligenes eutrophus hypothetical 21.0 kDa protein TR:O68272 (EMBL:AF026544) (183 aa) fasta scores: E(): 2.8e-48, 73.48% id in 181 aa, and to Burkholderia spDSMZ 9242. hypothetical 21.8 kDa protein TR:Q9RB79 (EMBL:AF153086) (188 aa) fasta scores: E(): 2.1e-47, 71.5% id in 179 aa
NP_879928.1	Similar to Pasteurella multocida hypothetical protein Pm0452 TR:Q9CNH9 (EMBL:AE006081) (173 aa) fasta scores: E(): 3.9e-34, 55.74% id in 174 aa, and to Campylobacter jejuni periplasmic protein P19 or Cj1659 TR:Q9PM18 (EMBL:AL139079) (179 aa) fasta scores: E(): 1.2e-32, 51.09% id in 182 aa
NP_879929.1	Similar to Prochlorothrix hollandica plastocyanin precursor PetE SW:PLAS_PROHO (P50057) (131 aa) fasta scores: E(): 2.7, 27.2% id in 125 aa, and to Rickettsia prowazekii hypothetical protein Rp394 SW:Y394_RICPR (Q9ZDD7) (125 aa) fasta scores: E(): 0.00021, 39.74% id in 78 aa
NP_879930.1	Similar to Neisseria meningitidis hypothetical protein Nmb0034 TR:Q9K1P7 (EMBL:AE002362) (279 aa) fasta scores: E(): 2.1e-20, 31.59% id in 269 aa, and to Streptomyces coelicolor  membrane protein Scc75a.23 TR:Q9RKQ1 (EMBL:AL133220) (290 aa) fasta scores: E(): 3.3e-18, 34.4% id in 250 aa
NP_879931.1	Similar to Synechocystis sp nitrogen assimilation regulatory protein Slr1529 TR:P74210 (EMBL:D90913) (835 aa) fasta scores: E(): 1.5e-09, 26.03% id in 434 aa, and to Achromobacter cycloclastes regulatory protein NosR TR:O68476 (EMBL:AF047429) (731 aa) fasta scores: E(): 0.05, 24.9% id in 261 aa, and to Rhizobium meliloti regulatory protein NosR TR:O68483 (EMBL:AF047430) (755 aa) fasta scores: E(): 1.4, 24.9% id in 249 aa
NP_879932.1	Similar to Pseudomonas aeruginosa phenazine/pyocyanine biosynthesis protein PhzF SW:PHZF_PSEAE (O69754) (278 aa) fasta scores: E(): 2.7e-08, 31.43% id in 299 aa, and to Erwinia chrysanthemi antibiotic biosynthesis protein Pab TR:CAC59746 (EMBL:AJ310612) (293 aa) fasta scores: E(): 1.5e-17, 36.42% id in 302 aa
NP_879933.1	transposase for IS481 element
NP_879934.1	Similar to Agrobacterium tumefaciens Agr_l_1189p TR:AAK89172 (EMBL:AE008257) (134 aa) fasta scores: E(): 1.3e-30, 65.89% id in 129 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3956 TR:Q9HX60 (EMBL:AE004813) (144 aa) fasta scores: E(): 4.3e-15, 45.9% id in 122 aa
NP_879935.1	Similar to Pseudomonas paucimobilis 2-pyrone-4,6-dicarboxylic acid hydrolase LigI TR:O87170 (EMBL:AB015964) (293 aa) fasta scores: E(): 6.8e-17, 30.76% id in 273 aa, and to Sphingomonas spLB126 FldB protein TR:Q9L399 (EMBL:AJ277295) (295 aa) fasta scores: E(): 4.1e-19, 32.24% id in 276 aa
NP_879936.1	Similar to Burkholderia cepacia hypothetical 35.5 kDa protein TR:AAK81675 (EMBL:AF029344) (337 aa) fasta scores: E(): 3.1e-31, 37.1% id in 318 aa, and to Variovorax paradoxus 2,4-diphenoxyacetic acid gene cluster TR:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 3.1e-31, 37.1% id in 318 aa
NP_879937.1	Similar to Rhizobium loti Mlr3365 protein TR:Q98GE6 (EMBL:AP003001) (389 aa) fasta scores: E(): 5.1e-26, 31.16% id in 385 aa, and to Streptomyces coelicolor isomerase Sce65.11C TR:Q9RKG2 (EMBL:AL133236) (377 aa) fasta scores: E(): 3.7e-24, 32.04% id in 362 aa
NP_879938.1	Similar to the previously sequenced Bordetella pertussis Brg1 TR:O30441 (EMBL:AF006000) (291 aa) fasta scores: E(): 3.4e-23, 34.02% id in 288 aa, and to Pseudomonas aeruginosa probable transcriptional regulator Pa0816 TR:Q9I5C3 (EMBL:AE004516) (294 aa) fasta scores: E(): 3e-23, 33.9% id in 289 aa
NP_879939.1	Similar to Picea abies short-chain type dehydrogenase/reductase SW:SDR1_PICAB (Q08632) (271 aa) fasta scores: E(): 1.4e-22, 38.37% id in 258 aa, and to Streptomyces coelicolor reductase Stah10.29 TR:Q9RKS8 (EMBL:AL132824) (262 aa) fasta scores: E(): 5e-40, 54.43% id in 248 aa
NP_879940.1	Similar to Zymomonas mobilis tetracenomycin C resistance and export protein YjcC TR:Q9X3X9 (EMBL:AF088896) (487 aa) fasta scores: E(): 6.8e-48, 45.64% id in 436 aa, and to Escherichia coli hypothetical transport protein YebQ or B1828 SW:YEBQ_ECOLI (P76269) (457 aa) fasta scores: E(): 6.9e-46, 45.59% id in 443 aa
NP_879941.1	Similar to Escherichia coli sodium/pantothenate symporter PanF or B3258 SW:PANF_ECOLI (P16256) (483 aa) fasta scores: E(): 7.4e-16, 25.22% id in 448 aa, and to Haemophilus influenzae sodium/pantothenate symporter PanF or Hi0975 SW:PANF_HAEIN (P44963) (484 aa) fasta scores: E(): 8.4e-14, 22.05% id in 467 aa
NP_879942.1	no significant database matches
NP_879943.1	Similar to Escherichia coli muramoyltetrapeptide carboxypeptidase LdcA or B1192 SW:LDCA_ECOLI (P76008) (304 aa) fasta scores: E(): 1.3e-16, 32.83% id in 265 aa, and to Streptomyces coelicolor hypothetical protein Sc9c7.25 SW:YC25_STRCO (Q9ZBI5) (310 aa) fasta scores: E(): 7.3e-24, 40.62% id in 320 aa
NP_879944.1	Similar to Rhizobium meliloti  adolase/adducin sma1976 TR:AAK65743 (EMBL:AE007294) (249 aa) fasta scores: E(): 3.9e-36, 48.01% id in 227 aa, and to Pseudomonas aeruginosa hypothetical aldolase class ii protein Pa3430 SW:YY30_PSEAE (Q9HYH5) (259 aa) fasta scores: E(): 6.5e-19, 34.48% id in 232 aa
NP_879945.1	Similar to Escherichia coli transcriptional activator protein LysR or B2839 SW:LYSR_ECOLI (P03030) (311 aa) fasta scores: E(): 3.4e-21, 32.36% id in 275 aa, and to Pseudomonas aeruginosa probable transcriptional regulator Pa5085 TR:Q9HU98 (EMBL:AE004921) (318 aa) fasta scores: E(): 7.8e-27, 34% id in 300 aa
NP_879946.1	Similar to Escherichia coli 2-hydroxy-3-oxopropionate reductase GarR or B3125 SW:GARR_ECOLI (P23523) (294 aa) fasta scores: E(): 6.8e-21, 31.61% id in 291 aa, and to Homo sapiens 3-hydroxyisobutyrate dehydrogenase, mitochondrial precursor HibadH SW:D3HI_HUMAN (P31937) (336 aa) fasta scores: E(): 1.9e-21, 32% id in 300 aa
NP_879947.1	Similar to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 4.1e-36, 37.73% id in 318 aa, and to Burkholderia cepacia hypothetical 35.5 kDa protein TR:AAK81675 (EMBL:AF029344) (337 aa) fasta scores: E(): 1.4e-32, 35.69% id in 311 aa
NP_879948.1	Similar to Rhizobium loti Mll4877 protein TR:Q98D37 (EMBL:AP003005) (194 aa) fasta scores: E(): 1.2e-33, 49.48% id in 194 aa, and to Eubacterium barkeri hypothetical protein in mgm 5' region TR:Q45883 (EMBL:X77484) (123 aa) fasta scores: E(): 5.3e-16, 44.53% id in 119 aa
NP_879949.1	no significant database matches
NP_879950.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa0320 TR:Q9I6H1 (EMBL:AE004470) (116 aa) fasta scores: E(): 3.7e-06, 35.05% id in 97 aa, and to Escherichia coli protein YgiW precursor or B3024 or Z4376 or Ecs3906 SW:YGIW_ECOLI (P52083) (130 aa) fasta scores: E(): 3.8e-05, 36.63% id in 101 aa
NP_879951.1	Similar to Pseudomonas aeruginosa succinylglutamate desuccinylase AstE or AruE or Pa0901 SW:ASTE_PSEAE (O50177) (332 aa) fasta scores: E(): 0.23, 25.82% id in 302 aa, and to Agrobacterium tumefaciens Agr_pat_335p TR:AAK90609 (EMBL:AE007893) (335 aa) fasta scores: E(): 0.0023, 26.44% id in 276 aa
NP_879952.1	transposase for IS481 element
NP_879953.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa2712 TR:Q9I0D0 (EMBL:AE004699) (287 aa) fasta scores: E(): 6.3e-48, 52.77% id in 288 aa, and to Rhizobium loti Mlr3480 protein TR:Q98G57 (EMBL:AP003002) (303 aa) fasta scores: E(): 3.5e-08, 31.67% id in 281 aa
NP_879954.1	Similar to the previously sequenced Bordetella pertussis Brg1 TR:O30441 (EMBL:AF006000) (291 aa) fasta scores: E(): 8e-11, 28.74% id in 254 aa, and to Yersinia pestis similar to hypothetical transcriptional regulator TR:Q9ZC44 (EMBL:AL031866) (320 aa) fasta scores: E(): 8.5e-23, 30.36% id in 303 aa
NP_879955.1	Similar to Bacillus stearothermophilus glutamine transport ATP-binding protein GlnQ SW:GLNQ_BACST (P27675) (242 aa) fasta scores: E(): 1.6e-52, 61.15% id in 242 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter Pa4192 TR:Q9HWI9 (EMBL:AE004835) (247 aa) fasta scores: E(): 9.6e-59, 70.29% id in 239 aa
NP_879956.1	Similar to Pseudomonas aeruginosa probable permease of ABC transporter Pa4193 TR:Q9HWI8 (EMBL:AE004835) (234 aa) fasta scores: E(): 3.1e-45, 57.33% id in 218 aa, and to Agrobacterium tumefaciens Agr_l_1163p TR:AAK89156 (EMBL:AE008256) (252 aa) fasta scores: E(): 4.6e-43, 52.42% id in 227 aa
NP_879957.1	Similar to Escherichia coli glutamate/aspartate transport system permease gltj gltj or b0654 SW:GLTJ_ECOLI (P41074) (246 aa) fasta scores: E(): 6.4e-22, 32.47% id in 234 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter Pa4194 TR:Q9HWI7 (EMBL:AE004835) (232 aa) fasta scores: E(): 7.6e-36, 47.03% id in 219 aa
NP_879958.1	Similar to Escherichia coli cystine-binding periplasmic protein precursor FliY or B1920 SW:FLIY_ECOLI (P39174) (266 aa) fasta scores: E(): 4.8e-13, 26% id in 223 aa, and to Pseudomonas aeruginosa probable binding protein component of ABC transporter Pa4195 TR:Q9HWI6 (EMBL:AE004836) (276 aa) fasta scores: E(): 8.1e-24, 36.17% id in 235 aa
NP_879959.1	Similar to Rhizobium leguminosarum aspartate aminotransferase AspC or AatA SW:AAT_RHILP (O86459) (400 aa) fasta scores: E(): 3.8e-76, 51.76% id in 396 aa, and to Rhizobium meliloti aspartate aminotransferase A AatA or R02325 or smc01578 SW:AATA_RHIME (Q02635) (400 aa) fasta scores: E(): 4.4e-76, 50.75% id in 396 aa
NP_879960.1	Similar to Pseudomonas straminea 4-hydroxy-4-methyl-2-oxoglutarate aldolase ProA TR:Q9AQI0 (EMBL:AB050935) (227 aa) fasta scores: E(): 1.2e-20, 39.37% id in 193 aa, and to Agrobacterium tumefaciens Agr_pat_472p TR:AAK90703 (EMBL:AE007901) (227 aa) fasta scores: E(): 2.8e-31, 46.39% id in 222 aa
NP_879961.1	Similar to the internal region of Bordetella bronchiseptica adhesin FhaB TR:Q9JP78 (EMBL:AF111796) (3634 aa) fasta scores: E(): 0.8, 28.31% id in 226 aa
NP_879962.1	Similar to Homo sapiens MHC class III region complement C4A TR:Q30211 (EMBL:S58715) (79 aa) fasta scores: E(): 4.1, 32.87% id in 73 aa
NP_879963.1	Similar to Vibrio cholerae lipoprotein Vc1962 TR:Q9KQN6 (EMBL:AE004271) (163 aa) fasta scores: E(): 5.4e-15, 42.63% id in 129 aa, and to Treponema pallidum 17 kDa lipoprotein precursor Tpp17 or Tp0435 SW:TA17_TREPA (P29722) (156 aa) fasta scores: E(): 0.0073, 30.06% id in 153 aa
NP_879964.1	Similar to Rhizobium loti Mll1641 protein TR:Q98K47 (EMBL:AP002997) (152 aa) fasta scores: E(): 1e-31, 54.11% id in 146 aa, and to Agrobacterium tumefaciens Agr_c_871p TR:AAK86305 (EMBL:AE007984) (167 aa) fasta scores: E(): 1.3e-30, 52.05% id in 146 aa. Also similar to BP2382, 42.553% identity (42.553% ungapped) in 141 aa overlap.
NP_879965.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
NP_879966.1	Similar to Burkholderia cepacia phosphate transport protein TR:Q9RMS6 (EMBL:AF190626) (181 aa) fasta scores: E(): 7.3, 31.63% id in 98 aa
NP_879967.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3612 TR:Q9HY14 (EMBL:AE004781) (73 aa) fasta scores: E(): 1.6e-11, 51.47% id in 68 aa, and to Vibrio cholerae hypothetical protein Vca0163 TR:Q9KN03 (EMBL:AE004357) (70 aa) fasta scores: E(): 4.5e-09, 49.2% id in 63 aa
NP_879968.1	Similar to Thermotoga maritima conserved hypothetical protein Tm1181 TR:Q9X0R3 (EMBL:AE001774) (179 aa) fasta scores: E(): 7.8e-26, 45.18% id in 166 aa, and to Bacillus halodurans Bh1524 protein TR:Q9KCP5 (EMBL:AP001512) (183 aa) fasta scores: E(): 7.4e-24, 41.95% id in 174 aa
NP_879969.1	Similar to Synechococcus sp ferredoxin II SW:FER2_SYNP6 (P08451) (104 aa) fasta scores: E(): 0.00022, 37.5% id in 96 aa, and to Vibrio cholerae ferredoxin Vc0311 TR:Q9KV47 (EMBL:AE004119) (89 aa) fasta scores: E(): 1.3e-06, 40.47% id in 84 aa
NP_879970.1	no significant database matches
NP_879971.1	Similar to the previously sequenced Bordetella pertussis transcriptional regulatory protein Btr SW:BTR_BORPE (Q08530) (241 aa) fasta scores: E(): 9.9e-65, 78.68% id in 244 aa. The previously sequenced btr may contain a frameshift following codon 26.
NP_879972.1	Similar to Escherichia coli clpB protein ClpB or HtpM or b2592 SW:CLPB_ECOLI (P03815) (857 aa) fasta scores: E(): 2.6e-183, 65.77% id in 862 aa, and to Neisseria meningitidis ClpB protein ClpB or Nma1683 TR:Q9JTP9 (EMBL:AL162756) (859 aa) fasta scores: E(): 3.1e-197, 69.98% id in 863 aa. Also similar to BP2753, 37.133% identity (46.014% ungapped) in 886 aa overlap.
NP_879973.1	transposase for IS481 element
NP_879974.1	Identical to the previously sequenced Bordetella pertussis tracheal colonization factor precursor Tcfa2 TR:O86135 (EMBL:AJ009785) (647 aa) fasta scores: E(): 1.7e-171, 99.84% id in 647 aa
NP_879975.1	Similar to Rhizobium loti transcriptional regulator Mll3386 TR:Q98GC7 (EMBL:AP003001) (219 aa) fasta scores: E(): 2.1e-34, 50.73% id in 205 aa, and to Mycobacterium tuberculosis CDC1551 transcriptional regulator, TetR family Mt3262 TR:AAK47601 (EMBL:AE007140) (200 aa) fasta scores: E(): 4.3e-05, 30.23% id in 172 aa
NP_879976.1	Similar to Rhizobium loti Mll9388 protein Mll9388 TR:Q981G1 (EMBL:AP003016) (408 aa) fasta scores: E(): 5.5e-89, 63.03% id in 395 aa, and to Rhizobium sp hypothetical protein Y4ou precursor Y4ou SW:Y4OU_RHISN (P55606) (402 aa) fasta scores: E(): 7.6e-88, 62.02% id in 395 aa
NP_879977.1	Similar to Rhizobium meliloti conserved hypothetical protein Sma1332 TR:AAK65386 (EMBL:AE007260) (280 aa) fasta scores: E(): 9.4e-70, 69.09% id in 275 aa, and to Rhizobium loti Mll9387 protein Mll9387 TR:Q981G2 (EMBL:AP003016) (285 aa) fasta scores: E(): 1.1e-69, 69.34% id in 274 aa
NP_879978.1	Similar to Rhizobium loti Mlr1698 protein Mlr1698 TR:Q98K03 (EMBL:AP002998) (147 aa) fasta scores: E(): 5.6e-16, 38.29% id in 141 aa, and to Mycobacterium tuberculosis hypothetical 16.8 kDa protein Rv1919c or Mtv050.03C TR:O53961 (EMBL:AL022020) (154 aa) fasta scores: E(): 0.046, 29.41% id in 136 aa
NP_879979.1	Similar to Salmonella typhimurium OsmT protein TR:CAC44465 (EMBL:AJ313506) (308 aa) fasta scores: E(): 3.8e-19, 31.66% id in 300 aa, and to Agrobacterium tumefaciens Agr_l_1195p TR:AAK89175 (EMBL:AE008258) (298 aa) fasta scores: E(): 5.7e-25, 34.25% id in 289 aa
NP_879980.1	Similar to Alcaligenes xylosoxydans xylosoxydans N-acyl-D-glutamate deacylase SW:NDED_ALCXX (P94211) (488 aa) fasta scores: E(): 1.9e-144, 78.78% id in 476 aa, and to Alcaligenes faecalis D-aminoacylase TR:Q9AGH8 (EMBL:AF332548) (484 aa) fasta scores: E(): 2e-73, 48.13% id in 482 aa
NP_879981.1	Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 4.6e-47, 44.98% id in 309 aa, and to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 6.7e-42, 41.45% id in 316 aa
NP_879982.1	Similar to Escherichia coli sulfite reductase [NADPH] flavoprotein alpha-component CysJ or B2764 SW:CYSJ_ECOLI (P38038) (598 aa) fasta scores: E(): 7.2e-14, 27.01% id in 596 aa, and to Caulobacter crescentus sulfite reductase Cc3063 TR:Q9A3Y7 (EMBL:AE005969) (504 aa) fasta scores: E(): 1.3e-40, 51.88% id in 503 aa
NP_879983.1	Similar to Salmonella typhimurium thiamine biosynthesis lipoprotein ApbE precursor ApbE SW:APBE_SALTY (P41780) (350 aa) fasta scores: E(): 3.9e-27, 34.15% id in 325 aa, and to Caulobacter crescentus thiamine biosynthesis protein ApbE,  Cc3062 TR:Q9A3Y8 (EMBL:AE005969) (342 aa) fasta scores: E(): 1.4e-49, 47.02% id in 336 aa
NP_879984.1	Similar to Xylella fastidiosa hypothetical protein Xf0595 TR:Q9PFR2 (EMBL:AE003905) (267 aa) fasta scores: E(): 4e-46, 50.76% id in 260 aa, and to Caulobacter crescentus hypothetical protein Cc3061 TR:Q9A3Y9 (EMBL:AE005969) (247 aa) fasta scores: E(): 7.2e-34, 49.5% id in 200 aa
NP_879985.1	Similar to Caulobacter crescentus hypothetical protein Cc3060 TR:Q9A3Z0 (EMBL:AE005969) (171 aa) fasta scores: E(): 1.3e-34, 55.23% id in 172 aa, and to Xylella fastidiosa hypothetical protein Xf0596 TR:Q9PFR1 (EMBL:AE003905) (174 aa) fasta scores: E(): 1.9e-33, 52.63% id in 171 aa
NP_879986.1	Similar to Caulobacter crescentus hypothetical protein Cc3059 TR:Q9A3Z1 (EMBL:AE005969) (209 aa) fasta scores: E(): 2.7e-43, 55.92% id in 211 aa, and to Xylella fastidiosa hypothetical protein Xf0597 TR:Q9PFR0 (EMBL:AE003905) (218 aa) fasta scores: E(): 7.7e-45, 56.73% id in 208 aa
NP_879987.1	Similar to Rhizobium loti nodulation ATP-binding protein I NodI or Mlr6164 SW:NODI_RHILO (P23703) (340 aa) fasta scores: E(): 3.7e-62, 63.14% id in 312 aa, and to Rhizobium tropici NodI TR:AAL02416 (EMBL:AY029295) (304 aa) fasta scores: E(): 6.2e-63, 63.33% id in 300 aa
NP_879988.1	Similar to Rhizobium sp nodulation protein J NodJ or Y4hE SW:NODJ_RHISN (P55475) (262 aa) fasta scores: E(): 2.2e-39, 42.3% id in 260 aa, and to Bradyrhizobium spWM9 probable nodulation ABC transporter permease nodJ TR:Q9AQ19 (EMBL:AF222753) (261 aa) fasta scores: E(): 3.8e-39, 44.7% id in 255 aa
NP_879989.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa5409 TR:Q9HTF5 (EMBL:AE004953) (186 aa) fasta scores: E(): 1.1e-33, 55.3% id in 179 aa, and to Rhizobium loti Mll6732 protein Mll6732 TR:Q988I2 (EMBL:AP003010) (200 aa) fasta scores: E(): 0.00082, 25.59% id in 168 aa
NP_879990.1	may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling
NP_879991.1	Similar to Zymomonas mobilis shc hpnE TR:Q56996 (EMBL:X80766) (414 aa) fasta scores: E(): 4.8e-06, 25.87% id in 456 aa, and to Neisseria meningitidis oxidoreductase Nma1338 TR:Q9JUF6 (EMBL:AL162755) (437 aa) fasta scores: E(): 5.1e-33, 38.92% id in 447 aa
NP_879992.1	Similar to Narcissus pseudonarcissus phytoene synthase precursor Psy SW:PSY_NARPS (P53797) (423 aa) fasta scores: E(): 8.1e-29, 32.72% id in 275 aa, and to Neisseria meningitidis phytoene synthase,  Nmb1168 or Nmb1130 TR:Q9JRU9 (EMBL:AE002465) (290 aa) fasta scores: E(): 3.7e-54, 51.43% id in 278 aa
NP_879993.1	Similar to Streptomyces griseus phytoene synthase CrtB or CrtI SW:CRTB_STRGR (P54977) (342 aa) fasta scores: E(): 2.4e-14, 34.57% id in 269 aa, and to Neisseria meningitidis  transferase Nma1721 TR:Q9JTL7 (EMBL:AL162756) (276 aa) fasta scores: E(): 1.9e-49, 50.54% id in 275 aa
NP_879994.1	Similar to Escherichia coli alanine racemase, catabolic DadX or DadB or AlnB or B1190 SW:ALR2_ECOLI (P29012) (356 aa) fasta scores: E(): 7.2e-61, 51.88% id in 372 aa, and to Salmonella typhimurium alanine racemase, catabolic DadB SW:ALR2_SALTY (P06191) (356 aa) fasta scores: E(): 1.3e-62, 52.81% id in 373 aa. Also similar to BP2228, 41.398% identity (42.659% ungapped) in 372 aa overlap.
NP_879995.1	Similar to Streptococcus agalactiae CylG TR:Q9X429 (EMBL:AF093787) (240 aa) fasta scores: E(): 1e-20, 34.16% id in 240 aa, and to Pseudomonas aeruginosa probable short-chain dehydrogenase Pa4162 TR:Q9HWL9 (EMBL:AE004832) (238 aa) fasta scores: E(): 2.6e-52, 61.53% id in 234 aa
NP_879996.1	no significant database matches
NP_879997.1	transposase for IS481 element
NP_879998.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
NP_879999.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
NP_880000.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa2847 TR:Q9HZZ6 (EMBL:AE004711) (249 aa) fasta scores: E(): 2.8e-32, 45.45% id in 242 aa, and to Streptomyces coelicolor hypothetical 26.0 kDa protein Sc7a8.24C TR:Q9L2D4 (EMBL:AL137187) (260 aa) fasta scores: E(): 8.7e-10, 29.8% id in 255 aa
NP_880001.1	no significant database matches
NP_880002.1	Similar to Escherichia coli multidrug resistance protein NorM or B1663 SW:NORM_ECOLI (P37340) (457 aa) fasta scores: E(): 1.2e-33, 32% id in 450 aa, and to Neisseria meningitidis probable multidrug resistance protein NorM or Nmb0812 SW:NORM_NEIMB (Q9K015) (459 aa) fasta scores: E(): 3e-46, 35.21% id in 443 aa
NP_880003.1	Similar to Neisseria meningitidis  inner membrane protein Nma0497 TR:Q9JW86 (EMBL:AL162753) (558 aa) fasta scores: E(): 2.5e-18, 26.04% id in 599 aa, and to Xylella fastidiosa hypothetical protein Xf0929 TR:Q9PEU9 (EMBL:AE003932) (583 aa) fasta scores: E(): 2.8e-06, 27.3% id in 498 aa
NP_880004.1	RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome
NP_880005.1	Similar to Anopheles gambiae tryptophan oxygenase To TR:O77457 (EMBL:L76433) (392 aa) fasta scores: E(): 1.3e-09, 31.32% id in 332 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2579 pa2579 TR:Q9I0Q7 (EMBL:AE004686) (288 aa) fasta scores: E(): 3.9e-70, 62.84% id in 288 aa
NP_880006.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa2081 TR:Q9I234 (EMBL:AE004635) (213 aa) fasta scores: E(): 3.2e-46, 58.25% id in 206 aa, and to Synechocystis sp hypothetical 23.8 kDa protein Slr2121 TR:P73988 (EMBL:D90911) (215 aa) fasta scores: E(): 9.2e-14, 31.62% id in 215 aa
NP_880007.1	Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase
NP_880008.1	Similar to Escherichia coli, and FkbP-type 16 kDa peptidyl-prolyl cis-trans isomerase FkbP or SlpA or B0028 or Z0033 or Ecs0031 SW:FKBX_ECOLI (P22563) (148 aa) fasta scores: E(): 5.9e-11, 33.56% id in 146 aa, and to Vibrio cholerae peptidyl-prolyl cis-trans isomerase, FkbP-type Vc0684 TR:Q9KU45 (EMBL:AE004154) (144 aa) fasta scores: E(): 5.4e-14, 38.35% id in 146 aa
NP_880009.1	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
NP_880010.1	Similar to Pseudomonas sp glutathione-S-transferase homolog NagL TR:O86043 (EMBL:AF036940) (212 aa) fasta scores: E(): 4.3e-42, 53.52% id in 213 aa, and to Rhizobium loti glutathione S-transferase mlr1135 TR:Q98L85 (EMBL:AP002996) (216 aa) fasta scores: E(): 6.3e-47, 57.27% id in 213 aa
NP_880011.1	Similar to Helicobacter pylori J99  jhp0839 TR:Q9ZKU6 (EMBL:AE001513) (99 aa) fasta scores: E(): 0.0048, 30% id in 80 aa
NP_880012.1	Similar to Rhizobium meliloti conserved hypothetical protein SMC00684 TR:CAC47266 (EMBL:AL591791) (381 aa) fasta scores: E(): 1.8e-27, 35.07% id in 345 aa, and to Agrobacterium tumefaciens Agr_l_2389p agr_l_2389 TR:AAK89764 (EMBL:AE008321) (411 aa) fasta scores: E(): 9.5e-27, 33.7% id in 359 aa, and to Escherichia coli hypothetical protein YjiA or b4352 SW:YJIA_ECOLI (P24203) (318 aa) fasta scores: E(): 4.7e-21, 31.15% id in 321 aa
NP_880013.1	Similar to Agrobacterium tumefaciens Agr_c_4536p TR:AAK88228 (EMBL:AE008162) (196 aa) fasta scores: E(): 3.4e-34, 53.96% id in 189 aa, and to Escherichia coli from bases 1061668 to 1073377 b1008 TR:P75894 (EMBL:AE000202) (196 aa) fasta scores: E(): 2.2e-34, 54.05% id in 185 aa
NP_880014.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa0056 TR:Q9I776 (EMBL:AE004445) (306 aa) fasta scores: E(): 1.8e-68, 61.33% id in 300 aa, and to Vibrio cholerae transcriptional regulator, LysR family Vca1055 TR:Q9KKP7 (EMBL:AE004431) (307 aa) fasta scores: E(): 4.1e-38, 43.49% id in 292 aa
NP_880015.1	Similar to Xylella fastidiosa hypothetical protein Xf2452 TR:Q9PAP3 (EMBL:AE004054) (327 aa) fasta scores: E(): 8.6e-19, 36.48% id in 296 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3197 TR:Q9HZ43 (EMBL:AE004743) (332 aa) fasta scores: E(): 1.3e-16, 37% id in 300 aa
NP_880016.1	Similar to Rhizobium loti Mlr8253 protein TR:Q983N1 (EMBL:AP003013) (546 aa) fasta scores: E(): 5.6e-20, 31.49% id in 562 aa, and to Escherichia coli hypothetical protein YciL or B1269 SW:YCIL_ECOLI (P37765) (291 aa) fasta scores: E(): 2.1e-31, 50.17% id in 293 aa
NP_880017.1	in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins
NP_880018.1	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination
NP_880019.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
NP_880020.1	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock
NP_880021.1	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs
NP_880022.1	Similar to Escherichia coli GTP-binding protein TypA/BipA TypA or BipA or B3871 SW:TYPA_ECOLI (P32132) (591 aa) fasta scores: E(): 2.4e-140, 63.34% id in 592 aa, and to Neisseria meningitidis GTP-binding protein TypA Nmb1199 TR:Q9JZB7 (EMBL:AE002467) (603 aa) fasta scores: E(): 1.5e-162, 72.91% id in 598 aa
NP_880023.1	Similar to the previously sequenced Bordetella pertussis pertussis toxin subunit 2 precursor PtxB SW:TOX2_BORPE (P04978) (226 aa) fasta scores: E(): 1.6e-06, 30.43% id in 207 aa, and to Bordetella pertussis pertussis toxin subunit 3 precursor PtxC SW:TOX3_BORPE (P04979) (227 aa) fasta scores: E(): 1.8e-06, 32.67% id in 202 aa
NP_880024.1	no significant database matches
NP_880025.1	Similar to Neisseria meningitidis hypothetical protein Nmb0283 TR:Q9K184 (EMBL:AE002385) (210 aa) fasta scores: E(): 1.1e-35, 55.89% id in 195 aa, and to Neisseria meningitidis hypothetical protein Nma2204 TR:Q9JSP2 (EMBL:AL162758) (210 aa) fasta scores: E(): 1.7e-35, 55.89% id in 195 aa
NP_880026.1	has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair
NP_880027.1	no significant database matches
NP_880028.1	Similar to Escherichia coli carboxymethylenebutenolidase YsgA or B3830 SW:DLHH_ECOLI (P56262) (258 aa) fasta scores: E(): 3.8e-48, 51.58% id in 252 aa, and to Methylobacterium extorquens carboxymethylenebutenolidase SW:DLHH_METEX (P71505) (291 aa) fasta scores: E(): 7.5e-53, 55.93% id in 261 aa. Also similar to BP2713, 55.253% identity (55.469% ungapped) in 257 aa overlap.
NP_880029.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa4822 TR:Q9HUY8 (EMBL:AE004895) (555 aa) fasta scores: E(): 1.1e-66, 44.82% id in 551 aa, and to Rhizobium meliloti hypothetical transmembrane protein Smc00233 TR:CAC46237 (EMBL:AL591788) (548 aa) fasta scores: E(): 1.8e-57, 37.47% id in 555 aa
NP_880030.1	Similar to Escherichia coli L-serine dehydratase 1 SdaA or B1814 SW:SDHL_ECOLI (P16095) (454 aa) fasta scores: E(): 1e-88, 53.89% id in 462 aa, and to Pseudomonas aeruginosa L-serine dehydratase SdaA or Pa2443 TR:Q9I139 (EMBL:AE004671) (458 aa) fasta scores: E(): 4.7e-121, 68.53% id in 464 aa
NP_880031.1	Similar to Xylella fastidiosa hypothetical protein Xf2273 TR:Q9PB71 (EMBL:AE004039) (236 aa) fasta scores: E(): 1.1e-72, 79.42% id in 209 aa, and to Pasteurella multocida hypothetical protein Pm0345 TR:Q9CNT0 (EMBL:AE006070) (233 aa) fasta scores: E(): 7.1e-70, 74.17% id in 213 aa
NP_880032.1	catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme
NP_880033.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
NP_880034.1	Similar to Escherichia coli thioredoxin 1 TrxA or TsnC or FipA or B3781 SW:THIO_ECOLI (P00274) (108 aa) fasta scores: E(): 6.4e-28, 66.35% id in 107 aa, and to Pseudomonas aeruginosa thioredoxin TrxA or Trx or Pa5240 SW:THIO_PSEAE (Q9X2T1) (108 aa) fasta scores: E(): 7.2e-32, 75.92% id in 108 aa. Also similar to BP1713, 39.000% identity in 100 aa overlap.
NP_880035.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
NP_880036.1	Similar to Streptomyces coelicolor  membrane protein Sc10h5.06 TR:O86498 (EMBL:AL031232) (207 aa) fasta scores: E(): 1.8, 32.14% id in 140 aa
NP_880037.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
NP_880038.1	Similar to Bacillus subtilis hypothetical 46.2 kDa protein in asnH-gntR intergenic region YxaH or S14H SW:YXAH_BACSU (P42107) (402 aa) fasta scores: E(): 8.4e-27, 31% id in 400 aa, and to Bacillus halodurans Bh3693 protein Bh3693 TR:Q9K6N5 (EMBL:AP001519) (405 aa) fasta scores: E(): 1.5e-26, 31.42% id in 401 aa
NP_880039.1	transposase for IS481 element
NP_880040.1	Similar to Pseudomonas spB4 glutathione S-transferase BphK TR:Q9RBS6 (EMBL:AJ245982) (196 aa) fasta scores: E(): 4.4e-08, 29.95% id in 207 aa, and to Escherichia coli O157:H7  transferase Ecs2058 TR:BAB35481 (EMBL:AP002557) (205 aa) fasta scores: E(): 7.2e-21, 38.04% id in 205 aa
NP_880041.1	Similar to Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivF or B3454 SW:LIVF_ECOLI (P22731) (237 aa) fasta scores: E(): 6.7e-53, 67.81% id in 233 aa, and to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraG or Pa1070 SW:BRAG_PSEAE (P21630) (233 aa) fasta scores: E(): 5.1e-54, 67.38% id in 233 aa
NP_880042.1	Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine
NP_880043.1	Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine
NP_880044.1	Similar to Escherichia coli high-affinity branched-chain amino acid transport system permease LivH or B3457 SW:LIVH_ECOLI (P08340) (308 aa) fasta scores: E(): 3.7e-61, 58.52% id in 311 aa, and to Salmonella typhimurium high-affinity branched-chain amino acid transport system permease LivH or LivA SW:LIVH_SALTY (P30295) (308 aa) fasta scores: E(): 7.7e-62, 59.67% id in 310 aa
NP_880045.1	Similar to Escherichia coli leu/ile/val-binding protein precursor LivJ or B3460 SW:LIVJ_ECOLI (P02917) (367 aa) fasta scores: E(): 7.4e-64, 48.05% id in 360 aa, and to Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC or Pa1074 SW:BRAC_PSEAE (P21175) (373 aa) fasta scores: E(): 1.6e-72, 52.02% id in 371 aa
NP_880046.1	transposase for IS481 element
NP_880047.1	Similar to Agrobacterium tumefaciens Agr_l_2416p TR:AAK89778 (EMBL:AE008321) (245 aa) fasta scores: E(): 2.4e-23, 46.34% id in 205 aa, and to Rhizobium meliloti hypothetical transmembrane protein Smc00703 TR:CAC47248 (EMBL:AL591791) (212 aa) fasta scores: E(): 1.2e-21, 46.82% id in 205 aa
NP_880048.1	Similar to Pseudomonas aeruginosa pyrroline-5-carboxylate reductase ProC or Pa0393 SW:PROC_PSEAE (P22008) (272 aa) fasta scores: E(): 8.7e-36, 45.95% id in 272 aa, and to Xylella fastidiosa pyrroline-5-carboxylate reductase Xf2712 TR:Q9PA08 (EMBL:AE004077) (305 aa) fasta scores: E(): 1.8e-31, 43.49% id in 269 aa
NP_880049.1	Similar to Escherichia coli glycerol-3-phosphate-binding periplasmic protein precursor UgpB or B3453 SW:UGPB_ECOLI (P10904) (438 aa) fasta scores: E(): 4.6e-91, 54.21% id in 439 aa, and to Agrobacterium tumefaciens Agr_l_3248p TR:AAK90201 (EMBL:AE008365) (439 aa) fasta scores: E(): 1.1e-78, 48.02% id in 431 aa
NP_880050.1	Similar to Escherichia coli sn-glycerol-3-phosphate transport system permease UgpA or B3452 SW:UGPA_ECOLI (P10905) (295 aa) fasta scores: E(): 2.1e-66, 59.65% id in 290 aa, and to Rhizobium meliloti probable glycerol-3-phosphate ABC transporter permease TR:CAC48803 (EMBL:AL603643) (293 aa) fasta scores: E(): 2e-74, 63.91% id in 291 aa
NP_880051.1	Similar to Escherichia coli sn-glycerol-3-phosphate transport system permease UgpE or B3451 SW:UGPE_ECOLI (P10906) (281 aa) fasta scores: E(): 2.1e-69, 61.48% id in 283 aa, and to Rhizobium meliloti probable glycerol-3-phosphate ABC transporter permease TR:CAC48804 (EMBL:AL603643) (282 aa) fasta scores: E(): 4.1e-70, 61.4% id in 285 aa
NP_880052.1	part of the UgpABCE glycerol-3-phosphate uptake system
NP_880053.1	Similar to Escherichia coli leu/ile/val-binding protein precursor LivJ or B3460 SW:LIVJ_ECOLI (P02917) (367 aa) fasta scores: E(): 3.8e-67, 49.86% id in 361 aa, and to Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC or Pa1074 SW:BRAC_PSEAE (P21175) (373 aa) fasta scores: E(): 8.8e-78, 58.1% id in 370 aa
NP_880054.1	Similar to Caulobacter crescentus hypothetical protein Cc2185 TR:Q9A6A9 (EMBL:AE005890) (207 aa) fasta scores: E(): 9.9e-30, 49.24% id in 199 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0201 TR:Q9I6T7 (EMBL:AE004458) (193 aa) fasta scores: E(): 4.3e-29, 48.04% id in 179 aa
NP_880055.1	transposase for IS481 element
NP_880056.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa0379 TR:Q9I6B6 (EMBL:AE004475) (125 aa) fasta scores: E(): 8.1e-17, 52.1% id in 119 aa, and to Bacillus subtilis hypothetical 12.0 kDa protein in ung-rocA intergenic region YwdK or Ipa-61D SW:YWDK_BACSU (P39619) (113 aa) fasta scores: E(): 2e-15, 54.45% id in 101 aa
NP_880057.1	Similar to Yersinia enterocolitica hypothetical 16.3 kDa protein TR:Q9F4G7 (EMBL:AY008264) (148 aa) fasta scores: E(): 5.1e-08, 31.75% id in 148 aa, and to Rhizobium meliloti hypothetical protein Smb20696 TR:CAC49803 (EMBL:AL603647) (161 aa) fasta scores: E(): 0.0009, 31.35% id in 118 aa
NP_880058.1	Similar to Yersinia enterocolitica hypothetical 17.2 kDa protein TR:Q9F4G8 (EMBL:AY008264) (152 aa) fasta scores: E(): 0.00042, 31.32% id in 166 aa, and to Rhizobium loti Mlr9079 protein Mlr9079 TR:Q982G8 (EMBL:AP003015) (160 aa) fasta scores: E(): 0.0017, 32.12% id in 165 aa
NP_880059.1	Similar to Escherichia coli  lipoprotein YaeC precursor YaeC or B0197 SW:YAEC_ECOLI (P28635) (271 aa) fasta scores: E(): 9.1e-26, 36.53% id in 260 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2349 TR:Q9I1C9 (EMBL:AE004661) (264 aa) fasta scores: E(): 3e-36, 44.09% id in 254 aa
NP_880060.1	Similar to Escherichia coli L-lactate dehydrogenase LldD or LctD or B3605 SW:LLDD_ECOLI (P33232) (396 aa) fasta scores: E(): 2.2e-37, 38.16% id in 359 aa, and to Streptomyces rishiriensis dehydrogenase CumR TR:Q9F8T4 (EMBL:AF235050) (389 aa) fasta scores: E(): 6.8e-42, 43.01% id in 365 aa
NP_880061.1	catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine
NP_880062.1	no significant database matches
NP_880063.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa4972 TR:Q9HUJ3 (EMBL:AE004910) (248 aa) fasta scores: E(): 1.5e-25, 37.61% id in 226 aa, and to Streptomyces coelicolor hypothetical 23.4 kDa protein Sc5c7.29 TR:O86726 (EMBL:AL031515) (226 aa) fasta scores: E(): 3.3, 29% id in 131 aa
NP_880064.1	Similar to Pyrococcus abyssi lipoate-protein ligase A related Pab1916 TR:Q9V0V8 (EMBL:AJ248285) (249 aa) fasta scores: E(): 2e-24, 37.02% id in 235 aa, and to Pyrococcus horikoshii 249aa long hypothetical lipoate protein ligase Ph1487 TR:O59156 (EMBL:AP000006) (249 aa) fasta scores: E(): 5e-23, 34.89% id in 235 aa
NP_880065.1	Similar to Halobacterium sp Vng6255C TR:Q9HHS3 (EMBL:AE005157) (89 aa) fasta scores: E(): 5.3e-08, 40.21% id in 92 aa
NP_880066.1	Similar to Streptomyces griseus regulatory protein for C-P lyase PhnO-like TR:Q54244 (EMBL:D29961) (150 aa) fasta scores: E(): 7.3e-26, 52% id in 150 aa, and to Rhizobium loti probable transcriptional regulator Mll1819 TR:Q98JR4 (EMBL:AP002998) (150 aa) fasta scores: E(): 4.9e-35, 61.74% id in 149 aa
NP_880067.1	Similar to Zea mays glutathione transferase III Gst3B TR:Q9SM20 (EMBL:AJ010296) (221 aa) fasta scores: E(): 1.2e-10, 30.28% id in 208 aa, and to Pseudomonas aeruginosa probable glutathione S-transferase Pa1033 TR:Q9I4U1 (EMBL:AE004536) (213 aa) fasta scores: E(): 2.2e-68, 77.61% id in 210 aa
NP_880068.1	Similar to Schizosaccharomyces pombe glutathione peroxidase Gpx1 or Spbc32f12.03C SW:GSHJ_SCHPO (O59858) (158 aa) fasta scores: E(): 1.7e-32, 50.96% id in 155 aa, and to Pseudomonas aeruginosa glutathione peroxidase Pa2826 TR:Q9I017 (EMBL:AE004709) (161 aa) fasta scores: E(): 1.3e-39, 61.68% id in 154 aa
NP_880069.1	Similar to Caulobacter crescentus hypothetical protein Cc1979 TR:Q9A6V4 (EMBL:AE005871) (407 aa) fasta scores: E(): 1.1e-29, 32.41% id in 398 aa, and to Agrobacterium tumefaciens Agr_l_3459p TR:AAK90303 (EMBL:AE008375) (407 aa) fasta scores: E(): 2.1e-27, 32.67% id in 407 aa
NP_880070.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa0015 TR:Q9I7B1 (EMBL:AE004441) (105 aa) fasta scores: E(): 2e-17, 55.44% id in 101 aa, and to Agrobacterium tumefaciens Agr_l_275p TR:AAK88708 (EMBL:AE008211) (129 aa) fasta scores: E(): 1.7e-10, 40.4% id in 99 aa
NP_880071.1	Its C-terminal region is similar to hypothetical racemases from a wide range of bacteria. No significant similarity over the entire length of the CDS.
NP_880072.1	Similar to Escherichia coli arsenate reductase ArsC or ArsG or B3503 SW:ARSC_ECOLI (P37311) (141 aa) fasta scores: E(): 9.4e-21, 57.52% id in 113 aa, and to Rhizobium meliloti hypothetical arsenate reductase TR:CAC45654 (EMBL:AL591786) (140 aa) fasta scores: E(): 1.4e-23, 59.48% id in 116 aa. Also similar to BP1681, 56.140% identity (57.658% ungapped) in 114 aa overlap.
NP_880073.1	Similar to Escherichia coli bacterioferritin comigratory protein Bcp or B2480 or Z3739 or Ecs3342 SW:BCP_ECOLI (P23480) (156 aa) fasta scores: E(): 1e-06, 28.84% id in 156 aa, and to Caulobacter crescentus bacterioferritin comigratory protein,  Cc1673 TR:Q9A7P7 (EMBL:AE005842) (177 aa) fasta scores: E(): 2.1e-26, 49.41% id in 170 aa
NP_880074.1	transposase for IS481 element
NP_880075.1	Similar to Bacillus halodurans YfiD or Bh3304 TR:Q9RC47 (EMBL:AB024562) (129 aa) fasta scores: E(): 2.8e-07, 35.04% id in 117 aa, and to Vibrio cholerae hypothetical protein Vca1019 TR:Q9KKT1 (EMBL:AE004428) (148 aa) fasta scores: E(): 2.5e-06, 38.71% id in 124 aa
NP_880076.1	Similar to Pseudomonas aeruginosa hypothetical 19.7 kDa protein TR:Q9L885 (EMBL:AF214673) (192 aa) fasta scores: E(): 6.1, 33.64% id in 107 aa
NP_880077.1	Similar to Rhizobium meliloti  oxidoreductase Smb20656 TR:CAC49763 (EMBL:AL603646) (289 aa) fasta scores: E(): 5.6e-44, 44.52% id in 274 aa, and to Rhizobium meliloti probable oxidoreductase Sma2157 TR:AAK65830 (EMBL:AE007303) (327 aa) fasta scores: E(): 3.4e-32, 38.21% id in 280 aa
NP_880078.1	Similar to Halobacterium sp Vng1536C TR:Q9HPP5 (EMBL:AE005067) (147 aa) fasta scores: E(): 3.5e-10, 36.23% id in 138 aa, and to Methanococcus jannaschii hypothetical protein Mj0531 SW:Y531_METJA (Q57951) (170 aa) fasta scores: E(): 7.4e-09, 32.62% id in 141 aa
NP_880079.1	no significant database matches
NP_880080.1	Similar to Salmonella typhimurium  transcriptional regulatory protein PtsJ SW:PTSJ_SALTY (P40193) (430 aa) fasta scores: E(): 1.7e-73, 54.31% id in 429 aa, and to Streptomyces coelicolor  GntR-family transcriptional regulator Sc10a9.02C TR:Q9AKA2 (EMBL:AL583943) (445 aa) fasta scores: E(): 1.9e-46, 43.3% id in 418 aa
NP_880081.1	Similar to Xylella fastidiosa hypothetical protein Xf1717 TR:Q9PCR1 (EMBL:AE003995) (266 aa) fasta scores: E(): 1e-62, 67.82% id in 258 aa, and to Bacillus halodurans Bh2550 protein TR:Q9K9U5 (EMBL:AP001515) (228 aa) fasta scores: E(): 1.3e-27, 43.04% id in 230 aa. Also similar to BP0560, 57.576% identity (58.333% ungapped) in 231 aa overlap.
NP_880082.1	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal
NP_880083.1	Similar to Streptomyces coelicolor  alpha amylase Scbac1a6.05C TR:Q9ADI2 (EMBL:AL589708) (805 aa) fasta scores: E(): 8.8e-23, 38.42% id in 864 aa, and to Pseudomonas aeruginosa probable glycosyl hydrolase Pa2162 TR:Q9I1V3 (EMBL:AE004643) (926 aa) fasta scores: E(): 4.1e-28, 45.05% id in 930 aa
NP_880084.1	Similar to Sulfolobus shibatae maltooligosyl trehalose trehalohydrolase TreZ TR:Q9UWN9 (EMBL:AF201335) (559 aa) fasta scores: E(): 3.4e-50, 34.79% id in 500 aa, and to Pseudomonas aeruginosa probable glycosyl hydrolase Pa2164 TR:Q9I1V1 (EMBL:AE004643) (583 aa) fasta scores: E(): 3.1e-101, 53.79% id in 554 aa
NP_880085.1	Similar to Escherichia coli glycogen operon protein GlgX or GlyX or B3431 SW:GLGX_ECOLI (P15067) (657 aa) fasta scores: E(): 5.3e-95, 47.25% id in 656 aa, and to Pseudomonas aeruginosa probable glycosyl hydrolase Pa2160 TR:Q9I1V5 (EMBL:AE004643) (716 aa) fasta scores: E(): 8.2e-151, 55.61% id in 712 aa
NP_880086.1	catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain
NP_880087.1	Similar to Pimelobacter sp trehalose synthase treS TR:P72235 (EMBL:D78198) (573 aa) fasta scores: E(): 2.4e-90, 58.22% id in 553 aa, and to Pseudomonas aeruginosa probable trehalose synthase Pa2152 TR:Q9I1W3 (EMBL:AE004642) (1100 aa) fasta scores: E(): 0, 58.35% id in 1107 aa
NP_880088.1	transposase for IS481 element
NP_880089.1	no significant database matches.
NP_880090.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa2168 TR:Q9I1U7 (EMBL:AE004644) (258 aa) fasta scores: E(): 8.8e-66, 65% id in 240 aa
NP_880091.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa2167 TR:Q9I1U8 (EMBL:AE004644) (365 aa) fasta scores: E(): 2.1e-39, 41.48% id in 364 aa
NP_880092.1	transposase for IS481 element
NP_880093.1	Similar to Pseudomonas aeruginosa probable phospholipase Pa2155 TR:Q9I1W0 (EMBL:AE004642) (401 aa) fasta scores: E(): 3.6e-84, 58.2% id in 390 aa, and to Escherichia coli hypothetical protein YbhO or B0789 or Z1008 or Ecs0867 SW:YBHO_ECOLI (P75771) (413 aa) fasta scores: E(): 1.4e-81, 52.68% id in 391 aa
NP_880094.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa2156 TR:Q9I1V9 (EMBL:AE004642) (245 aa) fasta scores: E(): 2.2e-62, 63.93% id in 244 aa, and to Escherichia coli hypothetical protein YbhP or B0790 or Z1009 or Ecs0868 SW:YBHP_ECOLI (P75772) (253 aa) fasta scores: E(): 2.8e-53, 53.72% id in 255 aa. Also similar to BP0710, 37.801% identity (46.610% ungapped) in 291 aa overlap.
NP_880095.1	Similar to Rhizobium loti Mll2459 protein Mll2459 TR:Q98ID0 (EMBL:AP002999) (180 aa) fasta scores: E(): 2.1e-16, 41.11% id in 180 aa, and to Escherichia coli hypothetical protein YqjI or B3071 SW:YQJI_ECOLI (Q46872) (207 aa) fasta scores: E(): 7e-11, 41.54% id in 142 aa
NP_880096.1	Similar to Agrobacterium tumefaciens Agr_pat_528p TR:AAK90738 (EMBL:AE007905) (921 aa) fasta scores: E(): 4.8e-42, 33.19% id in 931 aa, and to Bordetella pertussis BapA protein bapA TR:Q9F4B4 (EMBL:AJ277632) (903 aa) fasta scores: E(): 1.3e-18, 29.75% id in 894 aa
NP_880097.1	Similar to Mycobacterium tuberculosis hypothetical 123.1 kDa protein Rv1251c or Mtv006.23C TR:O50466 (EMBL:AL021006) (1139 aa) fasta scores: E(): 3e-51, 37.83% id in 1171 aa, and to Mycobacterium leprae hypothetical protein Ml1098 TR:Q9CC95 (EMBL:AL583920) (1152 aa) fasta scores: E(): 2.9e-45, 36.9% id in 1176 aa
NP_880098.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa2417 TR:Q9I164 (EMBL:AE004669) (312 aa) fasta scores: E(): 4.1e-55, 52.72% id in 294 aa, and to Rhizobium meliloti  transcription regulator protein Smc01570 TR:CAC46900 (EMBL:AL591790) (296 aa) fasta scores: E(): 6.3e-42, 41.69% id in 295 aa
NP_880099.1	Similar to Rhizobium loti Mll5191 protein Mll5191 TR:Q98CD9 (EMBL:AP003005) (203 aa) fasta scores: E(): 4.2e-35, 52.17% id in 184 aa, and to Streptomyces coelicolor  reductase Scah10.16 TR:Q9RKU1 (EMBL:AL132824) (185 aa) fasta scores: E(): 1.8e-21, 40.32% id in 186 aa
NP_880100.1	Similar to Leuconostoc mesenteroides citrate lyase beta chain CitE SW:CILB_LEUMC (O53078) (302 aa) fasta scores: E(): 1.8e-26, 35.06% id in 288 aa, and to Caulobacter crescentus citrate lyase beta subunit,  Cc3659 TR:Q9A2A7 (EMBL:AE006024) (295 aa) fasta scores: E(): 1.3e-42, 47.22% id in 288 aa
NP_880101.1	Similar to Rhizobium meliloti  transcriptional regulator, GntR family protein Smb20773 TR:CAC49865 (EMBL:AL603647) (228 aa) fasta scores: E(): 4.7e-14, 35.29% id in 204 aa, and to Pseudomonas aeruginosa probable transcriptional regulator Pa0797 TR:Q9I5E1 (EMBL:AE004515) (240 aa) fasta scores: E(): 1.8e-13, 31.28% id in 211 aa
NP_880102.1	Similar to Giardia lamblia acetyl-CoA synthetase TR:Q9Y1N2 (EMBL:AF107206) (726 aa) fasta scores: E(): 8.7e-33, 27.75% id in 735 aa, and to Archaeoglobus fulgidus conserved hypothetical protein Af1211 TR:O29057 (EMBL:AE001020) (685 aa) fasta scores: E(): 1.6e-41, 31.98% id in 691 aa
NP_880103.1	Catalyzes the first step in the citric acid cycle. Oxaloacetate and acetyl-CoA bind to citrate synthase, which then catalyzes the reaction which joins the two compounds together
NP_880104.1	Similar to Rhizobium meliloti  conserved membrane-anchored protein Smb21182 TR:CAC49248 (EMBL:AL603645) (394 aa) fasta scores: E(): 8.4e-39, 37.01% id in 389 aa, and to Streptomyces coelicolor racemase Scf41.21 TR:Q9RJU8 (EMBL:AL117387) (403 aa) fasta scores: E(): 3.5e-37, 38.06% id in 402 aa
NP_880105.1	Similar to Pseudomonas putida hypothetical 34.5 kDa protein in clcB-clcD intergenic region precursor SW:YCLC_PSEPU (Q47100) (329 aa) fasta scores: E(): 6.3e-30, 33.11% id in 308 aa, and to Alcaligenes eutrophus hypothetical 35.7 kDa protein MacB TR:Q9RBG2 (EMBL:AF130250) (340 aa) fasta scores: E(): 1.8e-29, 34.61% id in 312 aa
NP_880106.1	Similar to Escherichia coli transcriptional repressor CytR or B3934 or Z5481 or Ecs4861 SW:CYTR_ECOLI (P06964) (341 aa) fasta scores: E(): 8.7e-25, 30% id in 350 aa, and to Streptomyces coelicolor probable LacI-family transcriptional regulator Scc57a.16 TR:Q9RDI2 (EMBL:AL136519) (347 aa) fasta scores: E(): 4e-27, 30.03% id in 323 aa
NP_880107.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
NP_880108.1	Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.2e-42, 39.37% id in 320 aa, and to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1.4e-40, 38.87% id in 319 aa
NP_880109.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa4041 TR:Q9HWY6 (EMBL:AE004821) (389 aa) fasta scores: E(): 1.7e-54, 43.97% id in 382 aa, and to Sulfolobus tokodaii 373aa long hypothetical mandelate racemase St1108 TR:BAB66141 (EMBL:AP000985) (373 aa) fasta scores: E(): 1.9e-13, 28.92% id in 325 aa
NP_880110.1	Similar to Streptococcus pyogenes 2-dehydropantoate 2-reductase ApbA or Spy0852 TR:Q9A0B3 (EMBL:AE006535) (307 aa) fasta scores: E(): 7.2e-19, 29.04% id in 303 aa, and to Halobacterium sp Vng0730C TR:Q9HRF0 (EMBL:AE005017) (303 aa) fasta scores: E(): 3.1e-18, 31.04% id in 306 aa
NP_880111.1	transposase for IS481 element
NP_880112.1	Similar to Rhizobium meliloti  amino acid ABC transporter ATP-binding protein Smc03894 TR:CAC47856 (EMBL:AL591793) (253 aa) fasta scores: E(): 1.3e-55, 69.91% id in 246 aa, and to Clostridium acetobutylicum amino acid ABC-type transporter ATPase component Cac3327 TR:Q97DZ3 (EMBL:AE007829) (247 aa) fasta scores: E(): 1.3e-39, 49.59% id in 246 aa. Similar to several B. pertussis CDSs: BP1181, P3828, BP1534, BP1855, BP1575, BP0054, P0768, and BP1510.
NP_880113.1	Similar to Rhizobium meliloti  amino acid transport system permease ABC transporter protein Smc03893 TR:CAC47855 (EMBL:AL591793) (226 aa) fasta scores: E(): 1.2e-57, 71.3% id in 223 aa, and to Clostridium acetobutylicum amino acid ABC-type transporter permease component Cac3326 TR:Q97DZ4 (EMBL:AE007829) (227 aa) fasta scores: E(): 3.2e-47, 64.95% id in 214 aa
NP_880114.1	Similar to Rhizobium loti amino acid ABC transporter periplasmic amino acid-binding protein Mll3861 TR:Q98FA8 (EMBL:AP003002) (267 aa) fasta scores: E(): 1.8e-58, 65.88% id in 255 aa, and to Clostridium acetobutylicum periplasmic amino acid binding protein cac3325 TR:Q97DZ5 (EMBL:AE007829) (269 aa) fasta scores: E(): 1.5e-47, 57.85% id in 242 aa
NP_880115.1	Similar to Neisseria meningitidis invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter spSE19. pilin inverting protein ChnY TR:Q9F7E1 (EMBL:AF282240) (324 aa) fasta scores: E(): 8.2e-50, 47.516% id in 322 aa
NP_880116.1	membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export
NP_880117.1	Similar to Pseudomonas aeruginosa FlgN TR:AAK31637 (EMBL:AY029221) (156 aa) fasta scores: E(): 3.5, 28.16% id in 142 aa
NP_880118.1	Similar to Escherichia coli negative regulator of flagellin synthesis FlgM or B1071 SW:FLGM_ECOLI (P43532) (97 aa) fasta scores: E(): 0.0023, 37.36% id in 91 aa, and to Salmonella typhimurium negative regulator of flagellin synthesis FlgM or FlgR or MviS SW:FLGM_SALTY (P26477) (97 aa) fasta scores: E(): 0.00074, 36.55% id in 93 aa
NP_880119.1	required for the assembly of the flagellar basal body P-ring
NP_880120.1	with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella
NP_880121.1	with FlgF and B makes up the proximal portion of the flagellar basal body rod
NP_880122.1	acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod
NP_880123.1	the hook connects flagellar basal body to the flagellar filament
NP_880124.1	FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod
NP_880125.1	makes up the distal portion of the flagellar basal body rod
NP_880126.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod
NP_880127.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum
NP_880128.1	Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space
NP_880129.1	with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook
NP_880130.1	With FlgK acts as a hook filament junction protein to join the flagellar filament to the hook
NP_880131.1	Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or Ched or B4355 SW:MCP1_ECOLI (P02942) (551 aa) fasta scores: E(): 1.4e-54, 46.18% id in 550 aa, and to Escherichia coli methyl-accepting chemotaxis protein II Tar or Chem or B1886 SW:MCP2_ECOLI (P07017) (553 aa) fasta scores: E(): 1.3e-53, 45.24% id in 557 aa
NP_880132.1	Similar to Escherichia coli methyl-accepting chemotaxis protein II Tar or CheM or B1886 SW:MCP2_ECOLI (P07017) (553 aa) fasta scores: E(): 1.8e-64, 45.36% id in 529 aa, and to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or B4355 SW:MCP1_ECOLI (P02942) (551 aa) fasta scores: E(): 1.1e-62, 45.59% id in 522 aa
NP_880133.1	Similar to Neisseria meningitidis invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter spSE19. pilin inverting protein ChnY TR:Q9F7E1 (EMBL:AF282240) (324 aa) fasta scores: E(): 8.2e-50, 47.516% id in 322 aa
NP_880134.1	Similar to Escherichia coli flagellar biosynthetic protein FliR or FlaP or B1950 SW:FLIR_ECOLI (P33135) (261 aa) fasta scores: E(): 3.9e-43, 49.8% id in 259 aa, and to Salmonella typhimurium flagellar biosynthetic protein FliR or FlaP SW:FLIR_SALTY (P54702) (264 aa) fasta scores: E(): 2.5e-42, 49.41% id in 257 aa
NP_880135.1	Similar to Escherichia coli flagellar biosynthetic protein FliQ or FlaQ or B1949 or Z3039 or Ecs2688 SW:FLIQ_ECOLI (P33134) (89 aa) fasta scores: E(): 6e-17, 60.22% id in 88 aa, and to Salmonella typhimurium flagellar biosynthetic protein FliQ or FlaQ SW:FLIQ_SALTY (P54701) (89 aa) fasta scores: E(): 5.2e-17, 61.36% id in 88 aa
NP_880136.1	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus
NP_880137.1	Similar to Escherichia coli flagellar protein FliO or FlbD or FlaP or B1947 SW:FLIO_ECOLI (P22586) (121 aa) fasta scores: E(): 2.8e-06, 36.36% id in 110 aa, and to Salmonella typhimurium flagellar protein FliO or FlbD or FlaP SW:FLIO_SALTY (P54699) (124 aa) fasta scores: E(): 2.1e-07, 37.61% id in 109 aa
NP_880138.1	Similar to Escherichia coli flagellar motor switch protein FliN or MotD or FlaN or B1946 SW:FLIN_ECOLI (P15070) (137 aa) fasta scores: E(): 1.3e-23, 61.53% id in 130 aa, and to Salmonella typhimurium flagellar motor switch protein FliN or MotD or FlaNf SW:FLIN_SALTY (P26419) (137 aa) fasta scores: E(): 3.7e-24, 63.84% id in 130 aa
NP_880139.1	Similar to Escherichia coli flagellar motor switch protein FliM or Fla AII or Fla QII or CheC2 or B1945 SW:FLIM_ECOLI (P06974) (334 aa) fasta scores: E(): 3.6e-66, 52.32% id in 323 aa, and to Salmonella typhimurium flagellar motor switch protein FliM or Fla AII or Fla QII or CheC2 SW:FLIM_SALTY (P26418) (334 aa) fasta scores: E(): 1.6e-67, 52.96% id in 321 aa
NP_880140.1	Similar to Escherichia coli flagellar protein FliL or Fla AI or Fla QI or CheC1 or b1944 or z3034 or ecs2683 SW:FLIL_ECOLI (P06973) (154 aa) fasta scores: E(): 2.7e-10, 43.92% id in 107 aa, and to Salmonella typhimurium flagellar protein FliL or Fla AI or Fla QI or CheC1 SW:FLIL_SALTY (P26417) (155 aa) fasta scores: E(): 2.4e-11, 39.26% id in 163 aa
NP_880141.1	transposase for IS481 element
NP_880142.1	Similar to Escherichia coli flagellar protein FliJ or FlaO or FlaS or B1942 SW:FLIJ_ECOLI (P52613) (147 aa) fasta scores: E(): 5.2e-10, 33.1% id in 145 aa, and to Salmonella typhimurium flagellar protein FliJ or FlaO or FlaS SW:FLIJ_SALTY (P26463) (147 aa) fasta scores: E(): 6e-10, 33.79% id in 145 aa
NP_880143.1	Similar to Escherichia coli flagellum-specific ATP synthase FliI or Fla AIII or FlaC or B1941 SW:FLII_ECOLI (P52612) (457 aa) fasta scores: E(): 4.1e-87, 64.95% id in 468 aa, and to Salmonella typhimurium flagellum-specific ATP synthase FliI or Fla AIII or FlaC SW:FLII_SALTY (P26465) (456 aa) fasta scores: E(): 4.1e-87, 65.58% id in 462 aa
NP_880144.1	binds to and inhibits the function of flagella specific ATPase FliI
NP_880145.1	One of three proteins involved in switching the direction of the flagellar rotation
NP_880146.1	the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod
NP_880147.1	Similar to Escherichia coli flagellar hook-basal body complex protein FliE or FlaN or Fla AI or B1937 or Z3027 or Ecs2676 SW:FLIE_ECOLI (P25797) (103 aa) fasta scores: E(): 3e-12, 47.22% id in 108 aa, and to Salmonella typhimurium flagellar hook-basal body complex protein FliE or FlaN or Fla AI SW:FLIE_SALTY (P26462) (103 aa) fasta scores: E(): 1.9e-11, 45.79% id in 107 aa
NP_880148.1	no significant database matches
NP_880149.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa1473 TR:Q9I3N9 (EMBL:AE004576) (111 aa) fasta scores: E(): 2e-07, 43.18% id in 88 aa, and to Bacillus subtilis YlqH protein TR:O34867 (EMBL:AJ000975) (93 aa) fasta scores: E(): 2.7e-07, 42.68% id in 82 aa
NP_880150.1	Similar to Salmonella typhimurium flagellar protein FliT SW:FLIT_SALTY (P26611) (122 aa) fasta scores: E(): 0.0035, 26.78% id in 112 aa, and to Escherichia coli flagellar protein FliT or B1926 or Z3016 or Ecs2665 SW:FLIT_ECOLI (P26610) (121 aa) fasta scores: E(): 0.009, 28.94% id in 114 aa
NP_880151.1	Similar to Salmonella typhimurium flagellar protein FliS SW:FLIS_SALTY (P26609) (135 aa) fasta scores: E(): 4.5e-19, 47.86% id in 117 aa, and to Escherichia coli flagellar protein FliS or B1925 SW:FLIS_ECOLI (P26608) (136 aa) fasta scores: E(): 1.8e-11, 33.33% id in 123 aa
NP_880152.1	Similar to Escherichia coli flagellar hook-associated protein 2 FliD or FlbC or FlaV or B1924 SW:FLID_ECOLI (P24216) (467 aa) fasta scores: E(): 1.8e-32, 35.24% id in 471 aa, and to Salmonella typhimurium flagellar hook-associated protein 2 FliD or FlbC or FlaV SW:FLID_SALTY (P16328) (466 aa) fasta scores: E(): 6.2e-27, 34.18% id in 471 aa
NP_880153.1	Similar to Pseudomonas aeruginosa FlaG TR:O33420 (EMBL:L81176) (128 aa) fasta scores: E(): 0.033, 31.35% id in 118 aa, and to Riftia pachyptila endosymbiont FlaG TR:Q9ZFD5 (EMBL:AF105060) (115 aa) fasta scores: E(): 0.049, 28.42% id in 95 aa
NP_880154.1	Similar to Escherichia coli FolC bifunctional protein [includes: folylpolyglutamate synthase and dihydrofolate synthase] FolC or DedC or B2315 SW:FOLC_ECOLI (P08192) (422 aa) fasta scores: E(): 4.1e-62, 48% id in 427 aa, and to Neisseria gonorrhoeae FolC bifunctional protein [includes: folylpolyglutamate synthase and dihydrofolate synthase] FolC TR:Q50990 (EMBL:Z68205) (424 aa) fasta scores: E(): 1.8e-72, 49.18% id in 429 aa
NP_880155.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa5052 TR:Q9HUC7 (EMBL:AE004918) (231 aa) fasta scores: E(): 0.00036, 35.71% id in 168 aa
NP_880156.1	Similar to Escherichia coli colicin V production protein CvpA or DedE or B2313 SW:CVPA_ECOLI (P08550) (162 aa) fasta scores: E(): 1.5e-10, 32.7% id in 159 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3109 TR:Q9HZB0 (EMBL:AE004735) (180 aa) fasta scores: E(): 1.1e-13, 36.25% id in 160 aa
NP_880157.1	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway
NP_880158.1	Similar to Escherichia coli disulfide bond formation protein B DsbB or RoxB or B1185 or Z1948 or Ecs1680 SW:DSBB_ECOLI (P30018) (176 aa) fasta scores: E(): 3.1e-05, 28.47% id in 144 aa, and to Pseudomonas aeruginosa disulfide bond formation protein B 1 DsbB1 or Pa5256 SW:DSB1_PSEAE (P21482) (163 aa) fasta scores: E(): 8.3e-08, 30.57% id in 157 aa
NP_880159.1	catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein
NP_880160.1	Similar to Escherichia coli, and methionine aminopeptidase Map or B0168 or Z0178 or Ecs0170 SW:AMPM_ECOLI (P07906) (264 aa) fasta scores: E(): 1.5e-53, 53.99% id in 263 aa, and to Xylella fastidiosa methionine aminopeptidase Xf0111 TR:Q9PH35 (EMBL:AE003865) (259 aa) fasta scores: E(): 5.7e-59, 60.08% id in 248 aa
NP_880161.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
NP_880162.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
NP_880163.1	Catalyzes the phosphorylation of UMP to UDP
NP_880164.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
NP_880165.1	catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate
NP_880166.1	Similar to Escherichia coli phosphatidate cytidylyltransferase CdsA or Cds or B0175 or Z0186 or Ecs0177 SW:CDSA_ECOLI (P06466) (249 aa) fasta scores: E(): 1.1e-15, 33.72% id in 255 aa, and to Haemophilus influenzae phosphatidate cytidylyltransferase CdsA or Cds or Hi0919 SW:CDSA_HAEIN (P44937) (288 aa) fasta scores: E(): 1.4e-19, 32.51% id in 286 aa
NP_880167.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
NP_880168.1	Similar to Escherichia coli inner membrane protein EcfE TR:AAL01378 (EMBL:AF407012) (450 aa) fasta scores: E(): 4e-55, 40.17% id in 448 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3649 TR:Q9HXY3 (EMBL:AE004785) (450 aa) fasta scores: E(): 7.8e-55, 43.45% id in 451 aa
NP_880169.1	Similar to Pseudomonas aeruginosa probable outer membrane protein Pa3648 TR:Q9HXY4 (EMBL:AE004784) (797 aa) fasta scores: E(): 7.3e-103, 39.77% id in 802 aa, and to Xylella fastidiosa outer membrane antigen Xf1046 TR:Q9PEI2 (EMBL:AE003941) (784 aa) fasta scores: E(): 1.9e-88, 37.58% id in 785 aa
NP_880170.1	Similar to Salmonella typhimurium outer membrane protein OmpH precursor OmpH SW:OMPH_SALTY (P16974) (161 aa) fasta scores: E(): 3.6e-06, 28.84% id in 156 aa, and to Neisseria meningitidis  outer membrane protein Nma0086 TR:Q9JX30 (EMBL:AL162752) (166 aa) fasta scores: E(): 8.9e-13, 39.63% id in 164 aa
NP_880171.1	adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis
NP_880172.1	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP
NP_880173.1	catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis
NP_880174.1	catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM
NP_880175.1	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids
NP_880176.1	Similar to Neisseria meningitidis  RNA methyltransferase Nma1351 TR:Q9JUE8 (EMBL:AL162755) (261 aa) fasta scores: E(): 7.7e-33, 42.91% id in 261 aa, and to Synechocystis sp hypothetical tRNA/rRNA methyltransferase Slr1673 SW:YG73_SYNY3 (P74261) (274 aa) fasta scores: E(): 5.4e-18, 32.95% id in 264 aa
NP_880177.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa1769 TR:Q9I2X0 (EMBL:AE004602) (274 aa) fasta scores: E(): 1.2e-51, 49.44% id in 269 aa, and to Neisseria meningitidis hypothetical protein Nmb0619 TR:Q9K0I1 (EMBL:AE002417) (273 aa) fasta scores: E(): 1.2e-48, 48.16% id in 272 aa
NP_880178.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
NP_880179.1	Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group
NP_880180.1	Similar to Neisseria meningitidis  membrane protein Nma1383 TR:Q9JUC5 (EMBL:AL162755) (135 aa) fasta scores: E(): 4e-06, 29.92% id in 137 aa, and to Mycobacterium tuberculosis hypothetical 15.2 kDa protein Cy277.08 precursor Rv1487 or Mtcy277.08 TR:P71767 (EMBL:Z79701) (144 aa) fasta scores: E(): 0.012, 30.07% id in 143 aa
NP_880181.1	transposase for IS481 element
NP_880182.1	Similar to Rickettsia conorii hypothetical 34.0 kDa protein Rc0452 TR:AAL02990 (EMBL:AE008609) (312 aa) fasta scores: E(): 2.1e-55, 53.33% id in 300 aa, and to Neisseria meningitidis membrane protein Gna1220 TR:Q9JPN3 (EMBL:AF226519) (315 aa) fasta scores: E(): 3.4e-53, 64.83% id in 310 aa
NP_880183.1	Similar to Rhizobium meliloti hypothetical transmembrane protein Smc01464 TR:CAC46726 (EMBL:AL591789) (426 aa) fasta scores: E(): 4.8e-25, 33.42% id in 377 aa, and to Rhizobium loti Mll4270 protein TR:Q98EF3 (EMBL:AP003003) (403 aa) fasta scores: E(): 1.3e-19, 29.72% id in 397 aa
NP_880184.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
NP_880185.1	Similar to Vibrio cholerae hypothetical protein Vc0849 SW:Y849_VIBCH (P52122) (144 aa) fasta scores: E(): 2.9e-24, 46.52% id in 144 aa, and to Escherichia coli hypothetical protein YfjG or B2619 SW:YFJG_ECOLI (P52121) (158 aa) fasta scores: E(): 1.1e-23, 42.25% id in 142 aa
NP_880186.1	Similar to Escherichia coli protein YfjF or B2618 SW:YFJF_ECOLI (P52119) (96 aa) fasta scores: E(): 9.8e-07, 43.52% id in 85 aa, and to Neisseria meningitidis hypothetical protein nma1005 or nmb0796 SW:YA05_NEIMA (Q9JRC2) (92 aa) fasta scores: E(): 6.1e-07, 36.78% id in 87 aa
NP_880187.1	Similar to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase Pa0746 TR:Q9I5I3 (EMBL:AE004509) (387 aa) fasta scores: E(): 2.8e-92, 62.36% id in 380 aa, and to Caulobacter crescentus acyl-CoA dehydrogenase Cc1350 TR:Q9A8K3 (EMBL:AE005810) (379 aa) fasta scores: E(): 5.4e-85, 56.99% id in 379 aa
NP_880188.1	Similar to Pseudomonas putida enoyl-coenzyme A hydratase TR:Q51969 (EMBL:U24215) (355 aa) fasta scores: E(): 1.9e-29, 38.66% id in 375 aa, and to Pseudomonas aeruginosa probable enoyl-CoA hydratase/isomerase Pa0744 TR:Q9I5I5 (EMBL:AE004509) (367 aa) fasta scores: E(): 1.5e-41, 46.47% id in 383 aa
NP_880189.1	Similar to Pseudomonas aeruginosa 3-hydroxyisobutyrate dehydrogenase MmsB or Pa3569 SW:MMSB_PSEAE (P28811) (298 aa) fasta scores: E(): 4.2e-66, 67% id in 294 aa, and to Rhizobium loti 3-hydroxyisobutyrate dehydrogenase Mlr1203 TR:Q98L30 (EMBL:AP002996) (294 aa) fasta scores: E(): 3.1e-44, 50.69% id in 290 aa
NP_880190.1	Similar to Rhizobium loti Mlr6946 protein TR:Q987R7 (EMBL:AP003010) (171 aa) fasta scores: E(): 5.5e-18, 48.85% id in 131 aa, and to Agrobacterium tumefaciens Agr_c_483p TR:AAK86098 (EMBL:AE007967) (149 aa) fasta scores: E(): 7.3e-14, 39.09% id in 133 aa
NP_880191.1	Similar to Caulobacter crescentus nodulin-related protein Cc0717 TR:Q9AA89 (EMBL:AE005747) (233 aa) fasta scores: E(): 8.4e-38, 60.71% id in 224 aa, and to Rhizobium loti Mlr6622 protein TR:Q988S0 (EMBL:AP003009) (231 aa) fasta scores: E(): 3.8e-37, 60.26% id in 224 aa
NP_880192.1	transposase for IS481 element
NP_880193.1	Maintains the balance of metabolites in the pentose-phosphate pathway
NP_880194.1	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers
NP_880195.1	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity
NP_880196.1	Similar to Escherichia coli probable phosphoglycerate mutase 2 GpmB or B4395 SW:PMG2_ECOLI (P36942) (215 aa) fasta scores: E(): 6e-15, 31.16% id in 215 aa, and to Arabidopsis thaliana  phosphoglyerate mutase TR:AAK59606 (EMBL:AY035101) (230 aa) fasta scores: E(): 2.2e-21, 38.57% id in 210 aa
NP_880197.1	Similar to the previously sequenced Bordetella pertussis Brg1 TR:O30441 (EMBL:AF006000) (291 aa) fasta scores: E(): 9.6e-14, 30.46% id in 302 aa, and to Neisseria meningitidis  LysR-family transcriptional regulator Nma1437 or Nmb1049 TR:Q9JRJ3 (EMBL:AL162755) (304 aa) fasta scores: E(): 5e-19, 31.52% id in 295 aa
NP_880198.1	Similar to Escherichia coli putrescine transport ATP-binding protein PotG or B0855 SW:POTG_ECOLI (P31134) (377 aa) fasta scores: E(): 4.2e-46, 44.1% id in 331 aa, and to Rhizobium meliloti  ATP-binding ABC transporter protein smc01608 TR:CAC46799 (EMBL:AL591790) (353 aa) fasta scores: E(): 1.2e-48, 45.74% id in 341 aa
NP_880199.1	Similar to Actinobacillus pleuropneumoniae ferric transport system permease AfuB SW:AFUB_ACTPL (Q44123) (687 aa) fasta scores: E(): 4.3e-38, 28% id in 550 aa, and to Agrobacterium tumefaciens Agr_l_586p agr_l_586 TR:AAK88866 (EMBL:AE008229) (561 aa) fasta scores: E(): 2.3e-50, 34.22% id in 564 aa
NP_880200.1	transposase for IS481 element
NP_880201.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
NP_880202.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa4632 TR:Q9HVF9 (EMBL:AE004877) (273 aa) fasta scores: E(): 6.6e-50, 53% id in 266 aa, and to Vibrio cholerae hypothetical protein Vca0581 TR:Q9KM08 (EMBL:AE004389) (263 aa) fasta scores: E(): 5.6e-24, 36.53% id in 271 aa
NP_880203.1	Similar to Escherichia coli molybdopterin-guanine dinucleotide biosynthesis protein B MobB or B3856 SW:MOBB_ECOLI (P32125) (174 aa) fasta scores: E(): 1.4e-19, 42.51% id in 167 aa, and to Rhizobium loti molybdopterin-guanine dinucleotide biosynthesis protein B Mlr0548 TR:Q98MK1 (EMBL:AP002995) (167 aa) fasta scores: E(): 4.9e-29, 54.08% id in 159 aa
NP_880204.1	Similar to Escherichia coli molybdopterin biosynthesis protein MoeA or ChlE or BisB or NarE or B0827 SW:MOEA_ECOLI (P12281) (411 aa) fasta scores: E(): 1.5e-63, 47.5% id in 400 aa, and to Vibrio cholerae molybdopterin biosynthesis MoeA protein Vc1527 TR:Q9KRV7 (EMBL:AE004231) (606 aa) fasta scores: E(): 6.6e-59, 43.72% id in 430 aa
NP_880205.1	in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis
NP_880206.1	Similar to Escherichia coli Mrp protein Mrp or B2113 SW:MRP_ECOLI (P21590) (369 aa) fasta scores: E(): 1e-54, 50% id in 334 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3481 TR:Q9HYC8 (EMBL:AE004769) (364 aa) fasta scores: E(): 3.9e-65, 53.61% id in 360 aa.Also similar to BP0182, 60.000% identity (60.167% ungapped) in 360 aa overlap.
NP_880209.1	Similar to Vibrio cholerae iron-sulfur cluster-binding protein Vc1516 TR:Q9KRW8 (EMBL:AE004230) (553 aa) fasta scores: E(): 7.7e-19, 35.92% id in 451 aa
NP_880210.1	Similar to Vibrio cholerae chaperone, formate dehydrogenase-specific,  Vc1515 TR:Q9KRW9 (EMBL:AE004230) (218 aa) fasta scores: E(): 1.1e-21, 43.54% id in 186 aa, and to Vibrio cholerae TorD protein Vc1720 TR:Q9KRC2 (EMBL:AE004250) (220 aa) fasta scores: E(): 0.0061, 25% id in 204 aa
NP_880211.1	Similar to Wolinella succinogenes formate dehydrogenase large subunit precursor FdhA TR:P28179 (EMBL:X54057) (939 aa) fasta scores: E(): 2.4e-89, 43.78% id in 973 aa, and to Campylobacter jejuni  formate dehydrogenase large subunit FdhA or Cj1511 TR:Q9PMF2 (EMBL:AL139078) (934 aa) fasta scores: E(): 9.8e-103, 44.84% id in 961 aa
NP_880212.1	no significant database matches
NP_880213.1	Similar to Wolinella succinogenes formate dehydrogenase subunit C precursor FdhC TR:P28180 (EMBL:X54057) (306 aa) fasta scores: E(): 2.3e-08, 27.75% id in 245 aa, and to Vibrio cholerae formate dehydrogenase, cytochrome B556 subunit Vc1511 TR:Q9KRX2 (EMBL:AE004229) (357 aa) fasta scores: E(): 3e-34, 36.9% id in 336 aa
NP_880214.1	no significant database matches
NP_880215.1	Similar to Alcaligenes eutrophus formate dehydrogenase FdsR TR:Q9RBF7 (EMBL:AJ007718) (299 aa) fasta scores: E(): 5.6e-30, 39.23% id in 288 aa, and to Bacillus subtilis YvgK protein YvgK TR:O32207 (EMBL:Z99121) (308 aa) fasta scores: E(): 7.8e-19, 30.47% id in 315 aa
NP_880216.1	Similar to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter Pa3442 TR:Q9HYG4 (EMBL:AE004765) (274 aa) fasta scores: E(): 1.7e-16, 41.12% id in 214 aa, and to Agrobacterium tumefaciens Agr_l_1395p TR:AAK89278 (EMBL:AE008268) (276 aa) fasta scores: E(): 2.6e-17, 37.26% id in 212 aa
NP_880217.1	Similar to Eubacterium acidaminophilum extracellular tungstate binding protein precursor TupA TR:CAC40782 (EMBL:AJ291988) (286 aa) fasta scores: E(): 1e-40, 51.21% id in 248 aa, and to Vibrio cholerae hypothetical protein Vc1523 TR:Q9KRW1 (EMBL:AE004231) (275 aa) fasta scores: E(): 2.8e-42, 47.14% id in 263 aa
NP_880218.1	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
NP_880219.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
NP_880220.1	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis
NP_880221.1	catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde
NP_880222.1	Similar to The N-terminal region of Pseudomonas aeruginosa twitching motility protein FimV TR:O87015 (EMBL:U93274) (927 aa) fasta scores: E(): 4.1e-09, 28.87% id in 561 aa
NP_880223.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
NP_880224.1	Similar to Rhodobacter sphaeroides periplasmic mannitol-binding protein SmoM TR:O30835 (EMBL:AF018073) (365 aa) fasta scores: E(): 1.1e-78, 54.9% id in 357 aa, and to Rhizobium loti periplasmic mannitol-binding protein, SmoM Mlr5166 TR:Q98CF9 (EMBL:AP003005) (369 aa) fasta scores: E(): 5.4e-77, 54.62% id in 368 aa
NP_880225.1	Similar to Rhizobium meliloti hypothetical transmembrane protein Smc04248 TR:CAC46497 (EMBL:AL591788) (191 aa) fasta scores: E(): 6.9e-34, 53.48% id in 172 aa, and to Rhizobium loti Mll5171 protein TR:Q98CF5 (EMBL:AP003005) (194 aa) fasta scores: E(): 3.9e-34, 50.78% id in 191 aa. Almost identical to BP0596, 99.522% identity in 209 aa overlap.
NP_880226.1	Similar to Rhizobium meliloti hypothetical transmembrane protein Smc04249 TR:CAC46498 (EMBL:AL591788) (597 aa) fasta scores: E(): 8.1e-127, 61.42% id in 560 aa, and to Rhizobium loti Mll5170 protein Mll5170 TR:Q98CF6 (EMBL:AP003005) (589 aa) fasta scores: E(): 2.5e-122, 61.38% id in 549 aa
NP_880227.1	catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis
NP_880228.1	transposase for IS481 element
NP_880229.1	Similar to the C-terminal regions of Salmonella typhimurium AdrA protein AdrA TR:Q9L401 (EMBL:AJ271071) (370 aa) fasta scores: E(): 8.8e-15, 34.71% id in 193 aa, and to Escherichia coli hypothetical protein YaiC or B0385 SW:YAIC_ECOLI (P21830) (371 aa) fasta scores: E(): 1e-14, 34.57% id in 188 aa
NP_880230.1	transposase for IS481 element
NP_880231.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3688 TR:Q9HXV2 (EMBL:AE004788) (114 aa) fasta scores: E(): 3.7, 27.55% id in 98 aa
NP_880232.1	Similar to Escherichia coli capsular synthesis regulator component B RcsB or B2217 or Z3476 or Ecs3106 SW:RCSB_ECOLI (P14374) (216 aa) fasta scores: E(): 1.7e-12, 30.73% id in 205 aa, and to Pseudomonas aeruginosa probable two-component response regulator Pa3714 TR:Q9HXS7 (EMBL:AE004790) (213 aa) fasta scores: E(): 6.9e-16, 32.38% id in 210 aa
NP_880233.1	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)
NP_880234.1	IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits
NP_880235.1	catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione
NP_880236.1	Similar to Vibrio furnissii PTS permease for mannose subunit IIIman N terminal domain ManW TR:P96165 (EMBL:U65015) (146 aa) fasta scores: E(): 0.00043, 33.33% id in 138 aa, and to Neisseria meningitidis sugar transport PTS system IIa component nma0390 TR:Q9JWF9 (EMBL:AL162753) (145 aa) fasta scores: E(): 9.9e-08, 29.85% id in 134 aa
NP_880237.1	Similar to Alcaligenes eutrophus phosphocarrier protein HPr PhbH SW:PTHP_ALCEU (P23537) (89 aa) fasta scores: E(): 1.6e-15, 57.3% id in 89 aa, and to Neisseria meningitidis phosphocarrier protein HPr PtsH or Nma0391 or Nmb2045 SW:PTHP_NEIMA (Q9JQN1) (89 aa) fasta scores: E(): 3e-13, 49.43% id in 89 aa
NP_880238.1	Similar to Escherichia coli phosphoenolpyruvate-protein phosphotransferase PtsI or B2416 SW:PT1_ECOLI (P08839) (575 aa) fasta scores: E(): 1.9e-68, 39.03% id in 561 aa, and to Neisseria meningitidis phosphoenolpyruvate-protein phosphotransferase PtsI or Nma0392 TR:Q9JWF8 (EMBL:AL162753) (591 aa) fasta scores: E(): 1.8e-85, 44.82% id in 551 aa
NP_880239.1	Similar to Homo sapiens proline rich peptide P-B precursor PbII TR:Q9UBN0 (EMBL:D29833) (79 aa) fasta scores: E(): 6.7, 38.59% id in 57 aa
NP_880240.1	catalyzes the formation of L-proline from L-ornithine
NP_880241.1	Similar to Deinococcus radiodurans branched-chain amino acid ABC transporter periplasmic amino acid- binding protein Dra0263 TR:Q9RYP6 (EMBL:AE001863) (424 aa) fasta scores: E(): 1.3e-66, 50.81% id in 370 aa, and to Agrobacterium tumefaciens Agr_c_2609p TR:AAK87205 (EMBL:AE008067) (387 aa) fasta scores: E(): 1.5e-52, 44.08% id in 372 aa. Similar to BP3568 (52.926% identity in 376 aa overlap)
NP_880242.1	Similar to Desulfitobacterium dehalogenans ABC transporter binding protein-like protein AabH TR:Q9APF8 (EMBL:AF299117) (269 aa) fasta scores: E(): 7.4e-41, 45.98% id in 274 aa, and to Streptomyces coelicolor probable amino acid ABC transporter protein, solute-binding component Sce20.02 TR:Q9RDC3 (EMBL:AL136058) (309 aa) fasta scores: E(): 1e-39, 43.1% id in 290 aa
NP_880243.1	Similar to Rhizobium meliloti  amino acid ABC transporter permease Smb20429 TR:CAC48815 (EMBL:AL603643) (219 aa) fasta scores: E(): 1.9e-33, 52.91% id in 206 aa, and to Agrobacterium tumefaciens Agr_l_252p TR:AAK88696 (EMBL:AE008210) (221 aa) fasta scores: E(): 1.7e-30, 49.75% id in 207 aa
NP_880244.1	Similar to Rhizobium meliloti  amino acid ABC transporter permease Smb20430 TR:CAC48816 (EMBL:AL603643) (220 aa) fasta scores: E(): 3.2e-42, 55.45% id in 211 aa, and to Streptomyces coelicolor probable amino acid ABC transporter protein, integral membrane component Sce20.04 TR:Q9RDC1 (EMBL:AL136058) (216 aa) fasta scores: E(): 2.2e-36, 52.31% id in 216 aa
NP_880245.1	Similar to Rhizobium sp probable amino acid ABC transporter ATP-binding protein Y4th SW:Y4TH_RHISN () (257 aa) fasta scores: E(): 2e-45, 54.29% id in 256 aa, and to Rhizobium meliloti  amino acid ABC transporter ATP-binding protein smb20427 TR:CAC48813 (EMBL:AL603643) (261 aa) fasta scores: E(): 7.4e-45, 53.57% id in 252 aa. Similar to several B. pertussis CDSs: BP1181, P3828, BP1534, BP1855, BP1575, BP1362, P0768, and BP0054.
NP_880246.1	transposase for IS481 element
NP_880247.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa2706 TR:Q9I0D6 (EMBL:AE004698) (131 aa) fasta scores: E(): 2.7e-20, 48.06% id in 129 aa, and to Rhizobium loti Mll0824 protein TR:Q98LY2 (EMBL:AP002995) (138 aa) fasta scores: E(): 1.9e-15, 38.76% id in 129 aa
NP_880248.1	Catalyzes the reversible two-electron oxidation of formate to carbon dioxide. It allows the assimilation of carbon dioxide and provides energy for growth through oxidative phosphorylation coupled to the reduction of oxygen, nitrate, sulphate or fumarate
NP_880249.1	Similar to Methylophilus methylotrophus  regulatory protein FmdB SW:FMDB_METME () (112 aa) fasta scores: E(): 6.1e-09, 39.82% id in 113 aa, and to Caulobacter crescentus hypothetical protein Cc2510 TR:Q9A5E0 (EMBL:AE005919) (106 aa) fasta scores: E(): 1.2, 34.24% id in 73 aa
NP_880250.1	Similar to Streptococcus salivarius UreI TR:Q55052 (EMBL:AF042344) (171 aa) fasta scores: E(): 2e-18, 39.53% id in 172 aa, and to Pseudomonas aeruginosa  transporter protein AmiS SW:AMIS_PSEAE () (171 aa) fasta scores: E(): 1.8e-30, 51.47% id in 169 aa
NP_880251.1	Similar to Methylophilus methylotrophus formamidase FmdA SW:FMDA_METME (Q50228) (407 aa) fasta scores: E(): 2e-125, 71.53% id in 397 aa, and to Emericella nidulans formamidase FmdS TR:Q9C453 (EMBL:AF274009) (411 aa) fasta scores: E(): 2e-91, 53.56% id in 407 aa
NP_880252.1	Similar to Rhizobium loti Mll1934 protein TR:Q98JH9 (EMBL:AP002998) (390 aa) fasta scores: E(): 5.7e-09, 23.54% id in 361 aa, and to Agrobacterium tumefaciens Agr_c_3081p TR:AAK87447 (EMBL:AE008089) (365 aa) fasta scores: E(): 3e-07, 24.28% id in 350 aa
NP_880253.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa4875 TR:Q9HUT8 (EMBL:AE004901) (98 aa) fasta scores: E(): 1.9e-18, 61.22% id in 98 aa, and to Deinococcus radiodurans hypothetical 12.2 kDa protein Dr0134 TR:Q9RY18 (EMBL:AE001876) (114 aa) fasta scores: E(): 3.5e-16, 47.32% id in 112 aa
NP_880254.1	class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis
NP_880255.1	Similar to Caulobacter crescentus hypothetical protein Cc3092 TR:Q9A3V9 (EMBL:AE005972) (134 aa) fasta scores: E(): 4.2e-22, 46.97% id in 132 aa, and to Rhizobium loti Mlr0112 protein TR:Q98NJ4 (EMBL:AP002994) (132 aa) fasta scores: E(): 1.4e-12, 34.09% id in 132 aa
NP_880256.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
NP_880257.1	Similar to Alcaligenes eutrophus hypothetical 10.9 kDa protein TR:Q9ZAL5 (EMBL:Y10831) (98 aa) fasta scores: E(): 1.1e-16, 71.93% id in 57 aa, and to Xylella fastidiosa hypothetical protein Xf2490 TR:Q9PAL4 (EMBL:AE004057) (100 aa) fasta scores: E(): 6.4e-12, 67.24% id in 58 aa
NP_880258.1	Similar to Alcaligenes eutrophus hypothetical 14.2 kDa protein TR:Q9ZAL4 (EMBL:Y10831) (133 aa) fasta scores: E(): 3.3e-41, 77.27% id in 132 aa, and to Xylella fastidiosa hypothetical protein Xf2491 TR:Q9PAL3 (EMBL:AE004057) (133 aa) fasta scores: E(): 1.9e-34, 65.15% id in 132 aa
NP_880259.1	no significant database matches
NP_880260.1	Similar to Agrobacterium tumefaciens Agr_l_2587p TR:AAK89860 (EMBL:AE008329) (171 aa) fasta scores: E(): 0.96, 29.03% id in 155 aa
NP_880261.1	Similar to Escherichia coli phosphoribosylaminoimidazole carboxylase catalytic subunit PurE or B0523 or Z0678 or Ecs0585 SW:PUR6_ECOLI (P09028) (168 aa) fasta scores: E(): 2e-25, 56.08% id in 148 aa, and to Neisseria meningitidis phosphoribosylaminoimidazole carboxylase catalytic subunit PurE or nma1651 TR:Q9JTS6 (EMBL:AL162756) (161 aa) fasta scores: E(): 5e-35, 67.09% id in 155 aa
NP_880262.1	With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway
NP_880263.1	Similar to Thermomonospora fusca hypothetical 34.2 kDa protein TR:Q9XCD2 (EMBL:AF144563) (335 aa) fasta scores: E(): 4.6e-26, 46.47% id in 340 aa, and to Bacillus halodurans Bh3771 protein TR:Q9K6F8 (EMBL:AP001519) (348 aa) fasta scores: E(): 1e-22, 38.71% id in 341 aa
NP_880264.1	Similar to Escherichia coli  amino acid ABC transporter binding protein YhdW precursor YhdW or B3268 SW:YHDW_ECOLI (P45766) (341 aa) fasta scores: E(): 2.5e-70, 54.22% id in 343 aa, and to Rhizobium meliloti probable general L-amino acid-binding periplasmic ABC transporter protein TR:CAC46057 (EMBL:AL591787) (341 aa) fasta scores: E(): 3.4e-70, 53.93% id in 343 aa
NP_880265.1	Similar to Pseudomonas putida PcaR protein TR:Q9R9T0 (EMBL:AJ252090) (291 aa) fasta scores: E(): 6.5e-21, 31.66% id in 240 aa, and to Pseudomonas aeruginosa transcriptional regulator PcaR or Pa0155 TR:Q9I6X7 (EMBL:AE004453) (279 aa) fasta scores: E(): 7.9e-22, 32.66% id in 248 aa
NP_880266.1	Similar to Pseudomonas aeruginosa agmatinase SpeB1 or Pa0288 TR:Q9I6K2 (EMBL:AE004466) (318 aa) fasta scores: E(): 5.2e-33, 39.8% id in 304 aa, and to Streptomyces coelicolor agmatinase SpeB TR:Q9L083 (EMBL:AL163641) (302 aa) fasta scores: E(): 3.7e-32, 40.92% id in 281 aa
NP_880267.1	Similar to Escherichia coli cystine-binding periplasmic protein precursor FliY or B1920 SW:FLIY_ECOLI (P39174) (266 aa) fasta scores: E(): 3.8e-16, 30.38% id in 260 aa, and to Salmonella typhimurium FliY TR:Q9ZNM2 (EMBL:AB010947) (266 aa) fasta scores: E(): 1.9e-16, 31.03% id in 261 aa
NP_880268.1	Similar to Thermotoga maritima amino acid ABC transporter permease Tm0592 TR:Q9WZ61 (EMBL:AE001734) (216 aa) fasta scores: E(): 1e-28, 42.57% id in 202 aa, and to Clostridium acetobutylicum amino acid ABC transporter permease component Cac3619 TR:Q97D61 (EMBL:AE007858) (217 aa) fasta scores: E(): 1.4e-27, 38.42% id in 216 aa
NP_880269.1	Similar to Escherichia coli hypothetical amino acid ABC transporter ATP-binding protein YhdZ YhdZ or B3271 SW:YHDZ_ECOLI (P45769) (252 aa) fasta scores: E(): 1.5e-58, 66.93% id in 245 aa, and to Pseudomonas marginalis pvalfalfae. hypothetical 28.9 kDa protein TR:O68330 (EMBL:AF033673) (254 aa) fasta scores: E(): 5.2e-59, 67.48% id in 243 aa. Similar to several B. pertussis CDSs: BP1181, P3828, BP0054, BP1855, BP1575, BP1362, P0768, and BP1510.
NP_880270.1	thiamine-pyrophosphate requiring enzyme
NP_880271.1	Similar to Rhizobium loti Mlr2698 protein TR:Q98HV2 (EMBL:AP003000) (156 aa) fasta scores: E(): 2.3e-18, 42.75% id in 145 aa, and to Agrobacterium tumefaciens Agr_c_4066p TR:AAK87976 (EMBL:AE008139) (169 aa) fasta scores: E(): 3.9e-18, 40.97% id in 144 aa
NP_880272.1	Similar to Mus musculus glutaryl-CoA dehydrogenase, mitochondrial precursor GcdH SW:GCDH_MOUSE (Q60759) (438 aa) fasta scores: E(): 3.4e-105, 65.99% id in 397 aa, and to Pseudomonas aeruginosa glutaryl-CoA dehydrogenase GcdH or Pa0447 TR:Q9I671 (EMBL:AE004482) (393 aa) fasta scores: E(): 1.1e-138, 84.38% id in 397 aa
NP_880273.1	catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit
NP_880274.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa0448 TR:Q9I670 (EMBL:AE004482) (302 aa) fasta scores: E(): 3.2e-45, 44.33% id in 291 aa, and to Rhizobium meliloti probable transcription regulator protein Smc04882 TR:CAC47866 (EMBL:AL591793) (297 aa) fasta scores: E(): 8.5e-39, 37.75% id in 294 aa
NP_880275.1	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs
NP_880276.1	Similar to Burkholderia solanacearum conserved hypothetical protein Rsc2545 TR:CAD16252 (EMBL:AL646070) (163 aa) fasta scores: E(): 7.4e-44, 69.75% id in 162 aa, and to Neisseria meningitidis hypothetical protein Nma1462 TR:Q9JU74 (EMBL:AL162756) (159 aa) fasta scores: E(): 2.6e-27, 44.72% id in 161 aa
NP_880277.1	Similar to Burkholderia solanacearum conserved hypothetical protein Rsc0416 TR:CAD13944 (EMBL:AL646059) (192 aa) fasta scores: E(): 1.1e-59, 77.6% id in 192 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4336 TR:Q9HW65 (EMBL:AE004850) (194 aa) fasta scores: E(): 4.2e-58, 78.53% id in 191 aa. Also similar to BP0064, 65.104% identity (65.104% ungapped) in 192 aa overlap.
NP_880278.1	Similar to Burkholderia solanacearum hypothetical protein Rsc0415 TR:CAD13943 (EMBL:AL646059) (134 aa) fasta scores: E(): 1.7e-32, 73.55% id in 121 aa, and to Agrobacterium tumefaciens Agr_l_852p TR:AAK88997 (EMBL:AE008241) (152 aa) fasta scores: E(): 5.8e-19, 49.13% id in 116 aa
NP_880279.1	transposase for IS481 element
NP_880280.1	Similar to Escherichia coli penicillin-binding protein 7 precursor PbpG or B2134 SW:PBP7_ECOLI (P33364) (313 aa) fasta scores: E(): 3.1e-43, 49.81% id in 263 aa, and to Burkholderia solanacearum D-alanyl-D-alanine-endopeptidase Rsc1609 TR:CAD15311 (EMBL:AL646065) (375 aa) fasta scores: E(): 6.1e-50, 59.83% id in 244 aa
NP_880281.1	no significant database matches
NP_880282.1	Similar to Pseudomonas aeruginosa probable MFS transporter Pa1286 TR:Q9I458 (EMBL:AE004558) (399 aa) fasta scores: E(): 9.9e-65, 49.61% id in 389 aa, and to Agrobacterium tumefaciens Agr_c_1918p TR:AAK86848 (EMBL:AE008034) (414 aa) fasta scores: E(): 4.1e-56, 41.87% id in 406 aa. Also similar to BP1973, 42.965% identity (43.959% ungapped) in 398 aa overlap.
NP_880283.1	Weakly similar to Caulobacter crescentus hypothetical protein Cc3537 TR:Q9A2M0 (EMBL:AE006012) (996 aa) fasta scores: E(): 1.6e-09, 26.54% id in 859 aa
NP_880284.1	Similar to Escherichia coli exodeoxyribonuclease V beta chain RecB or RorA or B2820 SW:EX5B_ECOLI (P08394) (1180 aa) fasta scores: E(): 0.0011, 23.34% id in 1118 aa, and to Rhizobium meliloti  ATP-dependent nuclease/helicase Smc02760 TR:CAC41421 (EMBL:AL591782) (1189 aa) fasta scores: E(): 6.7e-17, 27.9% id in 1229 aa
NP_880285.1	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA
NP_880286.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa1533 TR:Q9I3I0 (EMBL:AE004581) (108 aa) fasta scores: E(): 4.5e-23, 63.88% id in 108 aa, and to Haemophilus influenzae protein Hi0442 SW:YBAB_HAEIN (P44711) (109 aa) fasta scores: E(): 3.9e-23, 63.2% id in 106 aa
NP_880287.1	involved in a recombinational process of DNA repair, independent of the recBC complex
NP_880288.1	transposase for IS481 element
NP_880289.1	no significant database matches
NP_880290.1	no significant database matches
NP_880291.1	Similar to Salmonella typhimurium LT2  inner membrane protein Stm2486 TR:AAL21380 (EMBL:AE008812) (287 aa) fasta scores: E(): 1.1e-58, 54.16% id in 288 aa, and to Yersinia pestis  membrane protein Ypo3058 TR:CAC92300 (EMBL:AJ414155) (288 aa) fasta scores: E(): 6.4e-58, 52.92% id in 291 aa
NP_880292.1	Similar to Neisseria meningitidis hypothetical protein Nmb0436 TR:Q9K0X0 (EMBL:AE002400) (213 aa) fasta scores: E(): 9.9e-40, 54.54% id in 209 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3199 TR:Q9HZ41 (EMBL:AE004744) (209 aa) fasta scores: E(): 4.8e-38, 49.26% id in 203 aa
NP_880293.1	transposase for IS481 element
NP_880294.1	Similar to Rhizobium loti Mlr5529 protein TR:Q98BK7 (EMBL:AP003006) (367 aa) fasta scores: E(): 8.4e-57, 45.92% id in 368 aa, and to Agrobacterium tumefaciens Agr_c_487p TR:AAK86100 (EMBL:AE007967) (364 aa) fasta scores: E(): 5e-42, 36.92% id in 371 aa
NP_880295.1	Similar to Agrobacterium tumefaciens Agr_c_491p TR:AAK86102 (EMBL:AE007967) (513 aa) fasta scores: E(): 7.2e-104, 56.35% id in 472 aa, and to Rhizobium loti Mlr5527 protein TR:Q98BK9 (EMBL:AP003006) (533 aa) fasta scores: E(): 7.4e-104, 56.14% id in 472 aa
NP_880296.1	Similar to Rhizobium meliloti hypothetical signal peptide protein Smc00402 TR:CAC41759 (EMBL:AL591783) (426 aa) fasta scores: E(): 3e-56, 63.07% id in 436 aa, and to Agrobacterium tumefaciens Agr_c_493p TR:AAK86103 (EMBL:AE007967) (447 aa) fasta scores: E(): 3.2e-56, 63.69% id in 438 aa
NP_880297.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3436 TR:Q9HYH0 (EMBL:AE004764) (185 aa) fasta scores: E(): 3e-32, 48.86% id in 176 aa, and to Deinococcus radiodurans conserved hypothetical protein Dr2141 TR:Q9RSI3 (EMBL:AE002048) (184 aa) fasta scores: E(): 2.1e-15, 31.79% id in 173 aa
NP_880298.1	Similar to Pseudomonas putida chromate reductase ChrR TR:AAK56852 (EMBL:AF375641) (186 aa) fasta scores: E(): 5.4e-24, 42.13% id in 178 aa, and to Rhizobium loti Mlr0414 protein TR:Q98MW2 (EMBL:AP002994) (192 aa) fasta scores: E(): 1.5e-26, 42.3% id in 182 aa
NP_880299.1	Similar to Streptomyces coelicolor hypothetical 9.6 kDa protein Scm10.03 TR:Q9RCZ5 (EMBL:AL133469) (85 aa) fasta scores: E(): 9.8e-16, 59.15% id in 71 aa, and to Rhizobium meliloti hypothetical protein Smb20068 TR:CAC48468 (EMBL:AL603642) (69 aa) fasta scores: E(): 1.3e-14, 61.76% id in 68 aa
NP_880300.1	This protein performs the mismatch recognition step during the DNA repair process
NP_880301.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa2630 TR:Q9I0K8 (EMBL:AE004691) (389 aa) fasta scores: E(): 1.6e-40, 39.85% id in 409 aa, and to Escherichia coli hypothetical protein YcfD ycfd or b1128 SW:YCFD_ECOLI (P27431) (373 aa) fasta scores: E(): 3.3e-31, 35.24% id in 383 aa
NP_880302.1	Identical to the previously sequenced Bordetella pertussis serotype 3 fimbrial subunit precursor Fim3 SW:FM3_BORPE (P17835) (204 aa) fasta scores: E(): 1.7e-74, 100% id in 204 aa
NP_880303.1	Similar to Burkholderia solanacearum probable transmembrane protein Rsc1146 TR:CAD14848 (EMBL:AL646062) (398 aa) fasta scores: E(): 8.6e-37, 41.99% id in 381 aa, and to Neisseria meningitidis hypothetical protein Nmb0928 TR:Q9JZR5 (EMBL:AE002444) (398 aa) fasta scores: E(): 1.7e-32, 32.97% id in 376 aa
NP_880304.1	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis
NP_880305.1	transposase for IS481 element
NP_880306.1	similar to periplasmic-binding component of ABC transporters
NP_880307.1	similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine
NP_880308.1	similar to ATP-binding component of ABC transporters
NP_880309.1	Similar to Escherichia coli guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase SpoT or B3650 or Z5076 or Ecs4525 SW:SPOT_ECOLI (P17580) (702 aa) fasta scores: E(): 5.2e-106, 48.09% id in 709 aa, and to Burkholderia solanacearum probable bifunctional enzyme : SpoT TR:CAD15860 (EMBL:AL646068) (735 aa) fasta scores: E(): 8.3e-164, 57.3% id in 726 aa
NP_880310.1	Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
NP_880311.1	Essential for recycling GMP and indirectly, cGMP
NP_880312.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa2481 TR:Q9I101 (EMBL:AE004676) (291 aa) fasta scores: E(): 2.4e-61, 58.8% id in 284 aa, and to Wolinella succinogenes CytA protein precursor cytA TR:CAC50081 (EMBL:AJ318778) (371 aa) fasta scores: E(): 5e-16, 36.14% id in 285 aa
NP_880313.1	Similar to Thiobacillus ferrooxidans  cytochrome C-552 diheme precursor CycA TR:Q9KIW6 (EMBL:AF220499) (260 aa) fasta scores: E(): 1e-14, 34.84% id in 221 aa, and to Pseudomonas aeruginosa probable cytochrome C Pa2482 TR:Q9I100 (EMBL:AE004676) (217 aa) fasta scores: E(): 6.6e-25, 46.11% id in 206 aa
NP_880314.1	Similar to Streptomyces coelicolor  oxidoreductase Scc75a.33 TR:Q9RKP1 (EMBL:AL133220) (263 aa) fasta scores: E(): 3.1e-58, 67.33% id in 248 aa, and to Rhizobium loti oxidoreductase Mll2989 TR:Q98H81 (EMBL:AP003000) (251 aa) fasta scores: E(): 2e-52, 57.49% id in 247 aa
NP_880315.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3472 TR:Q9HYD4 (EMBL:AE004768) (198 aa) fasta scores: E(): 3.5e-21, 42.22% id in 180 aa, and to Xylella fastidiosa hypothetical protein Xf0653 TR:Q9PFK4 (EMBL:AE003909) (212 aa) fasta scores: E(): 1.9e-18, 40.67% id in 177 aa
NP_880316.1	Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile
NP_880317.1	Similar to Rickettsia conorii hypothetical protein Rc1223 TR:AAL03761 (EMBL:AE008669) (142 aa) fasta scores: E(): 4.2e-09, 42.35% id in 85 aa, and to Agrobacterium tumefaciens Agr_c_3184p TR:AAK87504 (EMBL:AE008095) (95 aa) fasta scores: E(): 0.0021, 34.92% id in 63 aa
NP_880318.1	Similar to an internal region of EDTA-degrading bacterium BNC1 ribosomal protein L1 TR:Q9EVJ4 (EMBL:AF176664) (232 aa) fasta scores: E(): 1.1, 42.42% id in 33 aa
NP_880319.1	Similar to Rickettsia conorii hypothetical protein Rc1222 TR:AAL03760 (EMBL:AE008669) (78 aa) fasta scores: E(): 0.0014, 40.9% id in 44 aa
NP_880320.1	Similar to Escherichia coli protein YicC or B3644 SW:YICC_ECOLI (P23839) (287 aa) fasta scores: E(): 7e-13, 37.86% id in 309 aa, and to Pseudomonas aeruginosa hypothetical protein Pa5335 TR:Q9HTM3 (EMBL:AE004946) (287 aa) fasta scores: E(): 2.8e-16, 40.9% id in 308 aa
NP_880321.1	RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs
NP_880322.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa0881 TR:Q9I564 (EMBL:AE004522) (450 aa) fasta scores: E(): 3.3e-104, 63.9% id in 446 aa, and to Methanothermobacter thermautotrophicus conserved protein Mth965 TR:O27046 (EMBL:AE000870) (452 aa) fasta scores: E(): 1.1e-29, 31.32% id in 447 aa
NP_880323.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator pa0877 TR:Q9I568 (EMBL:AE004522) (298 aa) fasta scores: E(): 3.2e-53, 47.63% id in 296 aa, and to Acinetobacter lwoffii hypothetical 32.3 kDa protein TR:O86997 (EMBL:U77659) (296 aa) fasta scores: E(): 1.5e-38, 37.71% id in 289 aa
NP_880324.1	Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or B4355 SW:MCP1_ECOLI (P02942) (551 aa) fasta scores: E(): 2.2e-49, 39.74% id in 556 aa, and to Salmonella typhimurium LT2 methyl-accepting chemotaxis protein I, serine sensor receptor Tsr TR:AAL23351 (EMBL:AE008913) (553 aa) fasta scores: E(): 4.5e-50, 40.9% id in 533 aa
NP_880325.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3258 TR:Q9HYY2 (EMBL:AE004748) (601 aa) fasta scores: E(): 1.4e-72, 37.3% id in 571 aa, and to Agrobacterium tumefaciens Agr_c_1510p TR:AAK86632 (EMBL:AE008015) (603 aa) fasta scores: E(): 3e-46, 30.32% id in 587 aa
NP_880326.1	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine
NP_880327.1	transposase for IS481 element
NP_880328.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
NP_880329.1	Similar to Escherichia coli glutamine synthetase GlnA or B3870 or Z5406 or Ecs4792 SW:GLNA_ECOLI (P06711) (468 aa) fasta scores: E(): 1.9e-129, 64.95% id in 468 aa, and to Herbaspirillum seropedicae glutamine synthetase GlnA TR:O86055 (EMBL:AF082873) (471 aa) fasta scores: E(): 1.6e-160, 81.5% id in 465 aa
NP_880330.1	Similar to Escherichia coli nitrogen regulation protein NR(II) GlnL or NtrB or GlnR or B3869 or Z5405 or Ecs4791 SW:NTRB_ECOLI (P06712) (349 aa) fasta scores: E(): 2.4e-37, 41.42% id in 350 aa, and to Herbaspirillum seropedicae histidine kinase NtrB TR:O86056 (EMBL:AF082873) (364 aa) fasta scores: E(): 3e-55, 48.59% id in 356 aa
NP_880331.1	Similar to Escherichia coli nitrogen regulation protein NR(I) GlnG or NtrC or GlnT or B3868 or Z5404 or Ecs4790 SW:NTRC_ECOLI (P06713) (469 aa) fasta scores: E(): 5.3e-85, 58.38% id in 495 aa, and to Herbaspirillum seropedicae transcriptional activator NtrC TR:O86057 (EMBL:AF082873) (500 aa) fasta scores: E(): 1.2e-100, 61.95% id in 502 aa
NP_880332.1	Similar to Escherichia coli hypothetical transcriptional regulator YeeY or B2015 SW:YEEY_ECOLI (P76369) (309 aa) fasta scores: E(): 5.6e-33, 39.38% id in 292 aa, and to Vibrio cholerae transcriptional regulator, LysR family Vca0575 TR:Q9KM14 (EMBL:AE004388) (295 aa) fasta scores: E(): 1.7e-32, 37.11% id in 291 aa
NP_880333.1	Similar to Synechocystis sp hypothetical 25.7 kDa protein Sll1773 SW:YH73_SYNY3 (P73623) (232 aa) fasta scores: E(): 3.3e-52, 55.79% id in 233 aa, and to Escherichia coli protein YhhW or B3439 SW:YHHW_ECOLI (P46852) (231 aa) fasta scores: E(): 1.1e-46, 52.79% id in 233 aa
NP_880334.1	Similar to Rhizobium loti pirin-related protein Mlr7473 TR:Q985Y4 (EMBL:AP003011) (306 aa) fasta scores: E(): 1.1e-56, 51.74% id in 286 aa, and to Agrobacterium tumefaciens Agr_c_1354p TR:AAK86555 (EMBL:AE008008) (307 aa) fasta scores: E(): 2.6e-55, 48.61% id in 288 aa
NP_880335.1	transposase for IS481 element
NP_880336.1	Similar to Pasteurella haemolytica  transmembrane permease FbpB TR:Q9ZHY1 (EMBL:AF047427) (525 aa) fasta scores: E(): 4.3e-63, 37.59% id in 524 aa, and to Agrobacterium tumefaciens Agr_c_717p TR:AAK86223 (EMBL:AE007978) (558 aa) fasta scores: E(): 3.6e-112, 56.78% id in 560 aa
NP_880337.1	Similar to Neisseria gonorrhoeae major ferric iron binding protein precursor FbP SW:FBP_NEIGO (P17259) (330 aa) fasta scores: E(): 2.1e-13, 27.55% id in 352 aa, and to Agrobacterium tumefaciens Agr_c_715p TR:AAK86222 (EMBL:AE007978) (351 aa) fasta scores: E(): 1.1e-85, 65.33% id in 349 aa
NP_880338.1	Similar to Azotobacter vinelandii ferredoxin--NADP reductase Fpr SW:FENR_AZOVI (Q44532) (257 aa) fasta scores: E(): 1.1e-70, 70.98% id in 255 aa, and to Pseudomonas aeruginosa ferredoxin--NADP+ reductase Fpr or Pa3397 TR:Q9HYK7 (EMBL:AE004761) (258 aa) fasta scores: E(): 6e-73, 71.7% id in 258 aa. Also similar to BP3581, 40.000% identity (42.276% ungapped) in 260 aa overlap.
NP_880339.1	Similar to Yersinia pestis LysR-family regulatory protein Ypo0669 TR:CAC89523 (EMBL:AJ414144) (303 aa) fasta scores: E(): 3.9e-68, 63.14% id in 293 aa, and to Burkholderia solanacearum probable transcription regulator protein Rsc1152 TR:CAD14854 (EMBL:AL646063) (297 aa) fasta scores: E(): 4.2e-72, 66.66% id in 291 aa
NP_880340.1	catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid
NP_880341.1	Similar to Homo sapiens 14.5 kDa translational inhibitor protein Psp SW:UK14_HUMAN (P52758) (137 aa) fasta scores: E(): 2.5e-16, 43.2% id in 125 aa, and to Xylella fastidiosa translation initiation inhibitor Xf0353 TR:Q9PGE9 (EMBL:AE003887) (127 aa) fasta scores: E(): 3.2e-22, 55.46% id in 128 aa
NP_880342.1	catalyzes branch migration in Holliday junction intermediates
NP_880343.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa5344 TR:Q9HTL4 (EMBL:AE004946) (310 aa) fasta scores: E(): 7.8e-62, 54.15% id in 301 aa, and to Neisseria meningitidis transcriptional regulator, LysR family Nmb0173 TR:Q9K1H8 (EMBL:AE002374) (306 aa) fasta scores: E(): 2.7e-53, 48.86% id in 307 aa
NP_880344.1	Similar to Caulobacter crescentus transcriptional regulator, LysR family Cc1474 TR:Q9A889 (EMBL:AE005821) (298 aa) fasta scores: E(): 2.2e-30, 41.4% id in 256 aa, and to Rhizobium loti probable transcriptional regulator Mlr1930 TR:Q98JI3 (EMBL:AP002998) (297 aa) fasta scores: E(): 2.6e-30, 37.54% id in 293 aa
NP_880345.1	Similar to Burkholderia solanacearum probable transmembrane aldehyde dehydrogenase oxidoreductase Rsp1055 TR:CAD18206 (EMBL:AL646082) (499 aa) fasta scores: E(): 3.7e-110, 61.27% id in 501 aa, and to Pseudomonas aeruginosa probable aldehyde dehydrogenase Pa0130 TR:Q9I702 (EMBL:AE004451) (497 aa) fasta scores: E(): 6.9e-95, 53.8% id in 500 aa
NP_880346.1	Similar to Burkholderia solanacearum  DNA protection during starvation or oxidative stress transcription regulator protein Dps TR:CAD16394 (EMBL:AL646071) (166 aa) fasta scores: E(): 2.1e-39, 64.24% id in 165 aa, and to Pseudomonas aeruginosa probable DNA-binding stress protein Pa0962 TR:Q9I4Z7 (EMBL:AE004530) (156 aa) fasta scores: E(): 3.8e-37, 69.07% id in 152 aa
NP_880349.1	no significant database matches
NP_880351.1	Similar to Escherichia coli polysialic acid transport protein KpsM SW:KPM2_ECOLI (P24584) (258 aa) fasta scores: E(): 1.3e-24, 31.49% id in 254 aa, and to Rhizobium meliloti  cell surface polysaccharide export ABC-2 transporter permease, close relative to Wzm1y20833 TR:CAC48962 (EMBL:AL603644) (274 aa) fasta scores: E(): 7.7e-29, 36.21% id in 243 aa
NP_880352.1	Similar to Escherichia coli polysialic acid transport ATP-binding protein KpsT SW:KST5_ECOLI (P24586) (224 aa) fasta scores: E(): 4.7e-25, 39.7% id in 204 aa, and to Pasteurella multocida HexA hexa or pm0781 TR:O85464 (EMBL:AF067175) (219 aa) fasta scores: E(): 2.6e-28, 43.47% id in 207 aa
NP_880353.1	Similar to Escherichia coli capsule polysaccharide export inner-membrane protein KpsE SW:KSE5_ECOLI (P42214) (382 aa) fasta scores: E(): 2.8e-21, 26.74% id in 359 aa, and to Neisseria meningitidis capsule polysaccharide export inner-membrane protein CtrB or Nmb0072 SW:CTRB_NEIMB (P32014) (387 aa) fasta scores: E(): 2.7e-22, 29.49% id in 373 aa
NP_880354.1	Similar to Salmonella typhi Vi polysaccharide biosynthesis protein VipC or TviE or Sty4656 SW:VIPC_SALTI (Q04975) (578 aa) fasta scores: E(): 5.7e-49, 33.15% id in 567 aa, and to Citrobacter freundii Vi biosynthesis protein VipD TR:Q9AP43 (EMBL:AF316551) (578 aa) fasta scores: E(): 5e-47, 32.68% id in 566 aa
NP_880355.1	Similar to Citrobacter freundii Vi biosynthesis protein VipC TR:Q9AP44 (EMBL:AF316551) (831 aa) fasta scores: E(): 2.5e-10, 23.73% id in 257 aa
NP_880356.1	Similar to Escherichia coli  polysaccharide export protein Wza precursor Wza or B2062 or Z3227 or Ecs2867 SW:WZA_ECOLI (P76388) (379 aa) fasta scores: E(): 7.9e-23, 32.14% id in 364 aa, and to Salmonella typhimurium  outer membrane lipoprotein Wza TR:Q9F7B3 (EMBL:AF285084) (378 aa) fasta scores: E(): 6e-23, 32.15% id in 367 aa
NP_880357.1	Similar to Pseudomonas aeruginosa WbpO TR:Q9RHD7 (EMBL:AF035937) (422 aa) fasta scores: E(): 3.1e-132, 80.23% id in 420 aa, and to Plesiomonas shigelloides orf1p WbgT TR:Q9S0Y5 (EMBL:AB025970) (437 aa) fasta scores: E(): 2.2e-120, 70.69% id in 430 aa. Almost identical to BP3150, 99.762% identity in 420 aa overlap.
NP_880358.1	Similar to Pseudomonas aeruginosa WbpP TR:Q9RHD6 (EMBL:AF035937) (341 aa) fasta scores: E(): 9.9e-97, 69.79% id in 341 aa, and to Salmonella typhi Vi polysaccharide biosynthesis protein VipB or TviC or Sty4660 SW:VIPB_SALTI (Q04973) (348 aa) fasta scores: E(): 2.8e-85, 63.17% id in 334 aa
NP_880359.1	Similar to Escherichia coli capsule polysaccharide export protein KpsC SW:KSC5_ECOLI (P42217) (675 aa) fasta scores: E(): 1.9e-87, 42.81% id in 689 aa, and to Pasteurella multocida LipA TR:Q9L9L5 (EMBL:AF169324) (682 aa) fasta scores: E(): 1.5e-98, 42.28% id in 629 aa
NP_880360.1	transposase for IS481 element
NP_880361.1	Similar to Rhizobium meliloti  arylsulfatase TR:Q92UC0 (EMBL:AL603646) (537 aa) fasta scores: E(): 1.8e-115, 57.43% id in 498 aa, and to Escherichia coli arylsulfatase AslA or AtsA or B3801 SW:ASLA_ECOLI (P25549) (551 aa) fasta scores: E(): 1.7e-34, 31.31% id in 463 aa
NP_880362.1	Similar to Rhizobium meliloti nonspecific acid phosphatase precursor NapE TR:AAK39518 (EMBL:AF354653) (334 aa) fasta scores: E(): 1.7e-72, 56.96% id in 323 aa
NP_880363.1	no significant database matches
NP_880364.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3074 TR:Q9HZD4 (EMBL:AE004731) (586 aa) fasta scores: E(): 1.1e-15, 33.07% id in 508 aa, and to Vibrio cholerae hypothetical protein Vca0171 TR:Q9KMZ5 (EMBL:AE004357) (646 aa) fasta scores: E(): 4.8e-11, 29.45% id in 499 aa
NP_880365.1	Similar to Bacteroides fragilis BatA SWALL:Q9X4N3 (EMBL:AF116251) (327 aa) fasta scores: E(): 1.4e-13, 31.29% id in 262 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3073 SWALL:Q9HZD5 (EMBL:AE004731) (340 aa) fasta scores: E(): 1.8e-31, 41.44% id in 345 aa
NP_880366.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3071 TR:Q9HZD7 (EMBL:AE004731) (312 aa) fasta scores: E(): 8.8e-30, 36.53% id in 312 aa, and to Vibrio cholerae hypothetical protein Vca0174 TR:Q9KMZ2 (EMBL:AE004357) (311 aa) fasta scores: E(): 1.2e-18, 37.39% id in 246 aa
NP_880367.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3070 TR:Q9HZD8 (EMBL:AE004731) (326 aa) fasta scores: E(): 4e-61, 54.85% id in 319 aa, and to Vibrio cholerae MoxR-related protein vca0175 TR:Q9KMZ1 (EMBL:AE004357) (318 aa) fasta scores: E(): 2.4e-58, 53.54% id in 310 aa
NP_880368.1	Similar to Rhizobium loti Mll5467 protein Mll5467 TR:Q98BQ7 (EMBL:AP003006) (319 aa) fasta scores: E(): 7.8e-27, 32.46% id in 308 aa, and to Comamonas testosteroni OrfX protein TR:Q9RHN7 (EMBL:AB029044) (296 aa) fasta scores: E(): 0.56, 27.71% id in 285 aa
NP_880369.1	Similar to Rhizobium meliloti hypothetical protein Sma1927 TR:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 8.7e-47, 41.46% id in 328 aa, and to Agrobacterium tumefaciens Agr_l_312p TR:AAK88723 (EMBL:AE008213) (329 aa) fasta scores: E(): 2.6e-45, 42.07% id in 328 aa
NP_880370.1	Similar to Mycobacterium tuberculosis dehydrogenase Rv2857c or Mtv003.03C TR:O33339 (EMBL:AL008883) (258 aa) fasta scores: E(): 2.7e-28, 40.47% id in 252 aa, and to Rhizobium sp  short-chain type dehydrogenase/reductase Y4lA SW:Y4LA_RHISN (P55541) (278 aa) fasta scores: E(): 5.9e-28, 36.86% id in 255 aa
NP_880371.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa1170 TR:Q9I4G7 (EMBL:AE004547) (244 aa) fasta scores: E(): 2.6e-42, 54.27% id in 234 aa, and to Bacillus subtilis YjbE protein TR:O31603 (EMBL:Z99110) (218 aa) fasta scores: E(): 2.6e-26, 46.66% id in 180 aa. Also similar to BP2538 (69.456% identity in 239 aa overlap), and to BP2539 (45.982% identity in 224 aa overlap).
NP_880372.1	transposase for IS481 element
NP_880373.1	Similar to Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivG or B3455 or Z4825 or Ecs4302 SW:LIVG_ECOLI (P22730) (255 aa) fasta scores: E(): 3.2e-33, 46.58% id in 249 aa, and to Deinococcus radiodurans branched-chain amino acid ABC transporter ATP-binding protein Dr0283 TR:Q9RXM7 (EMBL:AE001889) (290 aa) fasta scores: E(): 7.8e-35, 47.65% id in 256 aa
NP_880374.1	Similar to Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivF or B3454 SW:LIVF_ECOLI (P22731) (237 aa) fasta scores: E(): 1.9e-34, 46.12% id in 232 aa, and to Streptomyces coelicolor  branched chain amino acid transport ATP-binding protein Sc7h2.26 TR:Q9S2J1 (EMBL:AL109732) (238 aa) fasta scores: E(): 4.3e-42, 55.55% id in 234 aa
NP_880375.1	Similar to Bacillus halodurans transcriptional regulator Bh2958 TR:Q9K8P5 (EMBL:AP001517) (215 aa) fasta scores: E(): 8e-09, 28.1% id in 185 aa, and to Pseudomonas fluorescens  transcriptional regulator Pfi2 TR:Q9RFR4 (EMBL:AF173683) (207 aa) fasta scores: E(): 1.2e-07, 24.06% id in 187 aa
NP_880377.1	transposase for IS481 element
NP_880378.1	Similar to Rhizobium meliloti capsular polysaccharide biosynthesis protein RkpI or R00574 or smc02270 SW:RKPI_RHIME (Q52938) (538 aa) fasta scores: E(): 1.9e-18, 29.24% id in 489 aa, and to Burkholderia mallei WcbQ TR:Q9AI31 (EMBL:AF285636) (511 aa) fasta scores: E(): 6e-45, 39.2% id in 500 aa
NP_880379.1	Similar to Myxococcus xanthus hypothetical oxidoreductase in uraA 5'region SW:YURA_MYXXA (P25970) (258 aa) fasta scores: E(): 1.4e-15, 39.35% id in 216 aa, and to Burkholderia mallei WcbP TR:Q9AI32 (EMBL:AF285636) (262 aa) fasta scores: E(): 2.1e-33, 44.26% id in 253 aa
NP_880380.1	transposase for IS481 element
NP_880382.1	The C-terminal region of this CDS is Similar to Deinococcus radiodurans sensor histidine kinase Dr0577 TR:Q9RWT8 (EMBL:AE001916) (590 aa) fasta scores: E(): 1.4e-05, 31.27% id in 227 aa, and to Pseudomonas aeruginosa probable two-component sensor pa1979 TR:Q9I2C8 (EMBL:AE004624) (216 aa) fasta scores: E(): 1.6e-06, 32.38% id in 176 aa
NP_880383.1	Similar to Streptomyces reticuli response regulatory protein SenR TR:Q9RIM0 (EMBL:Y14336) (217 aa) fasta scores: E(): 1.8e-15, 34.52% id in 223 aa, and to Streptomyces coelicolor AbsA2 or Sce8.19 TR:Q53894 (EMBL:U51332) (222 aa) fasta scores: E(): 3.9e-16, 30.88% id in 204 aa
NP_880384.1	sequence contains 6 Ns. to be corrected
NP_880385.1	Similar to Vibrio cholerae hypothetical protein Vca0469 TR:Q9KMA5 (EMBL:AE004379) (104 aa) fasta scores: E(): 7.4e-05, 33.69% id in 92 aa, and to Agrobacterium tumefaciens Agr_c_3184p TR:AAK87504 (EMBL:AE008095) (95 aa) fasta scores: E(): 3.6e-05, 32.94% id in 85 aa
NP_880387.1	Similar to Escherichia coli glutathione S-transferase Gst or B1635 or Z2647 or Ecs2344 SW:GT_ECOLI (P39100) (201 aa) fasta scores: E(): 8.3e-17, 34.15% id in 202 aa, and to Rhizobium meliloti  glutathione S-transferase TR:CAC45528 (EMBL:AL591785) (206 aa) fasta scores: E(): 3.8e-45, 57.71% id in 201 aa
NP_880388.1	Similar to Alcaligenes eutrophus alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase TfdA SW:TFDA_ALCEU (P10088) (287 aa) fasta scores: E(): 3.2e-37, 43.21% id in 280 aa, and to Alcaligenes denitrificans 2,4-d dioxygenase TfdA TR:Q9KX47 (EMBL:U32188) (287 aa) fasta scores: E(): 2.3e-34, 41.28% id in 281 aa
NP_880389.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa2115 TR:Q9I200 (EMBL:AE004639) (317 aa) fasta scores: E(): 2.2e-09, 22.48% id in 298 aa, and to Rhizobium meliloti LysR family transcriptional regulator, probable Sma0557 TR:AAK64948 (EMBL:AE007221) (295 aa) fasta scores: E(): 3.3e-07, 26.15% id in 260 aa
NP_880390.1	Similar to Rhizobium meliloti hypothetical protein Sma1927 TR:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 4.3e-37, 36.66% id in 300 aa, and to Pseudomonas putida hypothetical 34.5 kDa protein in clcB-clcD intergenic region precursor SW:YCLC_PSEPU (Q47100) (329 aa) fasta scores: E(): 8.6e-37, 37.82% id in 312 aa
NP_880391.1	Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase Pa5524 TR:Q9HT49 (EMBL:AE004965) (260 aa) fasta scores: E(): 1.6e-22, 38.43% id in 255 aa, and to Streptomyces cinnamonensis monensin polyketide synthase  ketoacyl reductase SW:DHKR_STRCM (P41177) (261 aa) fasta scores: E(): 7.4e-21, 36.92% id in 260 aa
NP_880392.1	Similar to Neisseria meningitidis lactate dehydrogenase LldA or Nmb1377 TR:Q51135 (EMBL:U58911) (390 aa) fasta scores: E(): 3.4e-45, 36.05% id in 380 aa, and to Pseudomonas aeruginosa L-lactate dehydrogenase LldA or Pa2382 TR:Q9I197 (EMBL:AE004664) (383 aa) fasta scores: E(): 4.7e-49, 38.48% id in 382 aa
NP_880393.1	Similar to Burkholderia solanacearum conserved hypothetical protein Rsc1824 TR:CAD15526 (EMBL:AL646066) (319 aa) fasta scores: E(): 1.8e-19, 35.39% id in 308 aa
NP_880394.1	Similar to Escherichia coli 3-oxoacyl-[acyl-carrier protein] reductase FabG or B1093 SW:FABG_ECOLI (P25716) (244 aa) fasta scores: E(): 1.2e-07, 27.23% id in 246 aa, and to Streptomyces coelicolor  dehydrogenase/reductase Scah10.14C TR:Q9RKU3 (EMBL:AL132824) (258 aa) fasta scores: E(): 9.6e-08, 31.14% id in 244 aa
NP_880395.1	Similar to Escherichia coli 3-oxoacyl-[acyl-carrier protein] reductase FabG or B1093 SW:FABG_ECOLI (P25716) (244 aa) fasta scores: E(): 7.6e-21, 34.69% id in 245 aa, and to Agrobacterium tumefaciens Agr_l_2601p agr_l_2601 TR:AAK89866 (EMBL:AE008330) (246 aa) fasta scores: E(): 7.2e-29, 44.13% id in 247 aa
NP_880396.1	Similar to Variovorax paradoxus 2,4-diphenoxyacetic acid gene cluster TR:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 1.9e-39, 38.8% id in 317 aa, and to Pseudomonas chlororaphis hypothetical 35.8 kDa protein TR:Q9L3W5 (EMBL:AJ271325) (336 aa) fasta scores: E(): 2.9e-39, 37.85% id in 317 aa
NP_880397.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa2206 TR:Q9I1R1 (EMBL:AE004647) (315 aa) fasta scores: E(): 5.9e-19, 28.85% id in 305 aa, and to Burkholderia solanacearum probable transcriptional regulatory DNA-binding transcription regulator protein PcaQ TR:CAD15142 (EMBL:AL646064) (319 aa) fasta scores: E(): 2.1e-16, 34.82% id in 313 aa
NP_880398.1	Similar to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 4.8e-32, 34.47% id in 322 aa, and to Alcaligenes eutrophus hypothetical 35.7 kDa protein MacB TR:Q9RBG2 (EMBL:AF130250) (340 aa) fasta scores: E(): 3.3e-30, 35.87% id in 315 aa
NP_880399.1	transposase for IS481 element
NP_880400.1	Similar to Thiobacillus ferrooxidans ArsH-like protein TR:Q9L9D0 (EMBL:AF173880) (240 aa) fasta scores: E(): 1.2e-60, 69.29% id in 228 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2280 TR:Q9I1J5 (EMBL:AE004653) (230 aa) fasta scores: E(): 2e-61, 69.56% id in 230 aa
NP_880401.1	Similar to Rhizobium meliloti  transport protein Smb21575 TR:CAC49415 (EMBL:AL603645) (401 aa) fasta scores: E(): 1.2e-30, 35.16% id in 401 aa, and to Agrobacterium tumefaciens Agr_pat_464p TR:AAK90697 (EMBL:AE007901) (417 aa) fasta scores: E(): 9.9e-31, 36.17% id in 387 aa
NP_880402.1	Similar to Thiobacillus ferrooxidans ArsR-like protein TR:Q9L9D2 (EMBL:AF173880) (118 aa) fasta scores: E(): 1.3e-11, 45.09% id in 102 aa, and to Caulobacter crescentus transcriptional regulator, ArsR family Cc1505 TR:Q9A859 (EMBL:AE005825) (109 aa) fasta scores: E(): 2e-11, 42.2% id in 109 aa
NP_880403.1	Similar to Rhizobium meliloti hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.5e-43, 40.37% id in 322 aa, and to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 5.1e-39, 39.37% id in 320 aa
NP_880404.1	Similar to Pseudomonas abietaniphila DitG TR:Q9X4X1 (EMBL:AF119621) (244 aa) fasta scores: E(): 1.9e-35, 50.22% id in 227 aa, and to Rhizobium loti short-chain dehydrogenase/reductase family mlr5208 TR:Q98CC5 (EMBL:AP003006) (235 aa) fasta scores: E(): 7.2e-19, 37.11% id in 229 aa
NP_880405.1	Similar to Agrobacterium tumefaciens pca operon transcriptional activator PcaQ SW:PCAQ_AGRTU (P52668) (311 aa) fasta scores: E(): 9.2e-13, 27.55% id in 294 aa, and to Rhizobium meliloti  transcriptional regulator protein Smb20123 TR:CAC48523 (EMBL:AL603642) (298 aa) fasta scores: E(): 1.4e-14, 29.43% id in 248 aa
NP_880406.1	Similar to Drosophila melanogaster Cg13065 protein TR:Q9VV13 (EMBL:AE003528) (140 aa) fasta scores: E(): 2.2, 39.53% id in 86 aa, and to Streptomyces coelicolor hypothetical 9.1 kDa protein Sch22a.29 TR:Q9L0V4 (EMBL:AL159178) (89 aa) fasta scores: E(): 8.7, 36.5% id in 63 aa
NP_880407.1	transposase for IS481 element
NP_880408.1	subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+
NP_880409.1	subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali
NP_880410.1	subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone
NP_880411.1	subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport
NP_880412.1	subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport
NP_880413.1	subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali
NP_880414.1	transposase for IS481 element
NP_880415.1	no significant database matches
NP_880416.1	Similar to Borrelia burgdorferi hypothetical protein Bb0007 SW:Y007_BORBU (O51040) (285 aa) fasta scores: E(): 7.4e-16, 26.31% id in 285 aa
NP_880417.1	Similar to Pseudomonas putida CumB TR:Q9X3V3 (EMBL:AF086638) (145 aa) fasta scores: E(): 5.4e-31, 59.31% id in 145 aa, and to Burkholderia solanacearum hydrolase rsc1451 TR:CAD15153 (EMBL:AL646064) (183 aa) fasta scores: E(): 6.3e-32, 63.69% id in 146 aa
NP_880418.1	Similar to Escherichia coli muramoyltetrapeptide carboxypeptidase LdcA or B1192 SW:LDCA_ECOLI (P76008) (304 aa) fasta scores: E(): 2.6e-36, 40% id in 300 aa, and to Neisseria meningitidis hypothetical protein Nma1819 or MccF TR:Q9JR41 (EMBL:AL162757) (394 aa) fasta scores: E(): 9.9e-35, 41.28% id in 281 aa
NP_880419.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_880420.1	Similar to Rhizobium meliloti  transmembrane protein Smc04283 TR:CAC46625 (EMBL:AL591789) (579 aa) fasta scores: E(): 3.8e-49, 49.83% id in 610 aa
NP_880421.1	Similar to Rhizobium meliloti hypothetical transmembrane protein Smc04287 TR:CAC46626 (EMBL:AL591789) (233 aa) fasta scores: E(): 5e-40, 52.63% id in 209 aa, and to Rhizobium loti Mll5171 protein TR:Q98CF5 (EMBL:AP003005) (194 aa) fasta scores: E(): 4.3e-14, 40.24% id in 164 aa
NP_880422.1	Similar to Rhizobium meliloti hypothetical protein Smc04289 TR:CAC46627 (EMBL:AL591789) (339 aa) fasta scores: E(): 1.1e-92, 69.27% id in 332 aa, and to Rhizobium loti periplasmic mannitol-binding protein, SmoM Mlr5166 TR:Q98CF9 (EMBL:AP003005) (369 aa) fasta scores: E(): 3.4e-29, 30.98% id in 355 aa
NP_880423.1	Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein Rsc1453 TR:CAD15155 (EMBL:AL646064) (540 aa) fasta scores: E(): 1.2e-125, 72.5% id in 542 aa, and to Escherichia coli hypothetical ABC transporter ATP-binding protein YbiT or B0820 or Z1042 or Ecs0897 SW:YBIT_ECOLI (P75790) (530 aa) fasta scores: E(): 5e-116, 67.41% id in 534 aa
NP_880424.1	Similar to Streptomyces coelicolor  ABC transporter ATP-binding protein Sc8g12.21 TR:Q9KYY4 (EMBL:AL355753) (270 aa) fasta scores: E(): 4.4e-32, 49.52% id in 212 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter Pa2294 TR:Q9I1I1 (EMBL:AE004655) (284 aa) fasta scores: E(): 2.7e-30, 45.65% id in 230 aa
NP_880425.1	Similar to Methanobacterium bryantii copper response extracellular protein TR:Q48929 (EMBL:U40213) (353 aa) fasta scores: E(): 1.3e-14, 29.32% id in 266 aa, and to Deinococcus radiodurans ABC transporter periplasmic substrate-binding protein,  dr1277 TR:Q9RUV4 (EMBL:AE001975) (325 aa) fasta scores: E(): 6.4e-14, 29.76% id in 299 aa
NP_880426.1	Similar to Pseudomonas aeruginosa probable permease of ABC transporter Pa3448 TR:Q9HYF8 (EMBL:AE004765) (274 aa) fasta scores: E(): 2.7e-18, 35.4% id in 257 aa, and to Streptomyces coelicolor  ABC transporter membrane component sc8g12.20 TR:Q9KYY5 (EMBL:AL355753) (267 aa) fasta scores: E(): 4e-18, 29.96% id in 257 aa
NP_880427.1	transposase for IS481 element
NP_880428.1	Similar to Rhizobium meliloti hypothetical protein Smc01701 TR:CAC41902 (EMBL:AL591783) (194 aa) fasta scores: E(): 1.3e-36, 54.01% id in 187 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0168 TR:Q9I6W4 (EMBL:AE004454) (196 aa) fasta scores: E(): 4.1e-35, 52.66% id in 188 aa
NP_880429.1	Similar to Escherichia coli thioredoxin 2 TrxC or B2582 or Z3867 or Ecs3448 SW:THI2_ECOLI (P33636) (139 aa) fasta scores: E(): 2.2e-13, 51.28% id in 78 aa, and to Streptomyces coelicolor thioredoxin TrxA2 TR:Q9RD25 (EMBL:AL133422) (134 aa) fasta scores: E(): 7.1e-23, 49.23% id in 130 aa. Also similar to BP1263, 39.000% identity in 100 aa overlap.
NP_880430.1	Similar to Pseudomonas fluorescens OrfX protein TR:Q9RHS8 (EMBL:AB023289) (431 aa) fasta scores: E(): 4.7e-101, 64.33% id in 429 aa, and to Rhizobium meliloti integral membrane transporter protein, xanthineuracil permeases family smb21281 TR:CAC49185 (EMBL:AL603644) (457 aa) fasta scores: E(): 1.3e-125, 78.37% id in 430 aa
NP_880431.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
NP_880432.1	Similar to Neisseria meningitidis invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter spSE19. pilin inverting protein ChnY TR:Q9F7E1 (EMBL:AF282240) (324 aa) fasta scores: E(): 8.2e-50, 47.516% id in 322 aa
NP_880433.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX
NP_880434.1	catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate
NP_880435.1	Similar to Escherichia coli protein-L-isoaspartate O-methyltransferase Pcm or B2743 or Z4051 or Ecs3597 SW:PIMT_ECOLI (P24206) (207 aa) fasta scores: E(): 2.6e-31, 51.7% id in 205 aa, and to Rhodocyclus gelatinosus Pcm protein TR:Q9JP91 (EMBL:AB034704) (270 aa) fasta scores: E(): 5.7e-33, 52.75% id in 218 aa
NP_880436.1	Similar to Escherichia coli lipoprotein NlpD precursor NlpD or B2742 SW:NLPD_ECOLI (P33648) (379 aa) fasta scores: E(): 2.2e-18, 39.39% id in 264 aa, and to Rhodocyclus gelatinosus NlpD protein nlpD TR:Q9JP90 (EMBL:AB034704) (314 aa) fasta scores: E(): 2.5e-29, 43.77% id in 297 aa
NP_880437.1	Similar to Neisseria meningitidis hypothetical protein Nma1628 TR:Q9JTU6 (EMBL:AL162756) (264 aa) fasta scores: E(): 6.4e-60, 55.89% id in 263 aa, and to Campylobacter jejuni hypothetical protein Cj1132C TR:Q9PNG2 (EMBL:AL139077) (264 aa) fasta scores: E(): 2.1e-26, 35.56% id in 239 aa
NP_880438.1	Weakly similar to Epiphyas postvittana apolipophorin-iii-like protein TR:Q9GPN5 (EMBL:AF314181) (186 aa) fasta scores: E(): 5.3, 22.89% id in 166 aa
NP_880439.1	Similar to Ralstonia solanacearum probable signal peptide protein Rsc0341 TR:CAD13869 (EMBL:AL646058) (268 aa) fasta scores: E(): 3.5e-18, 37.9% id in 277 aa, and to Caulobacter crescentus hypothetical protein Cc2658 TR:Q9A513 (EMBL:AE005933) (230 aa) fasta scores: E(): 2.5e-11, 34.65% id in 202 aa
NP_880440.1	in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]
NP_880441.1	Similar to Rhizobium meliloti heavy metal dependent transcription regulator HmrR SW:HMRR_RHIME (Q9X5X4) (147 aa) fasta scores: E(): 1.2e-35, 71.53% id in 130 aa, and to Agrobacterium tumefaciens strC58 Agr_c_1709p TR:AAK86743 (EMBL:AE008024) (140 aa) fasta scores: E(): 3.7e-29, 60.3% id in 131 aa. Also similar to BP3173, 58.333% identity in 84 aa overlap.
NP_880442.1	Similar to Pseudomonas syringae OrfH protein TR:Q9KWM7 (EMBL:AB033420) (65 aa) fasta scores: E(): 2.9e-05, 43.54% id in 62 aa, and to Agrobacterium tumefaciens strC58 Agr_c_2220p TR:AAK87005 (EMBL:AE008049) (84 aa) fasta scores: E(): 2.5e-07, 47.61% id in 63 aa
NP_880443.1	Similar to Vibrio cholerae peroxiredoxin family protein/glutaredoxin Vc2637 TR:Q9KNU3 (EMBL:AE004330) (247 aa) fasta scores: E(): 3.4e-61, 65.14% id in 241 aa, and to Neisseria meningitidis  redoxin Nma1141 or Nmb0946 TR:Q9JQS4 (EMBL:AL162755) (245 aa) fasta scores: E(): 4e-59, 64.31% id in 241 aa
NP_880444.1	Catalyzes the oxidation of dihydrolipoamide to lipoamide
NP_880445.1	Similar to Neisseria meningitidis hypothetical protein Nmb1061 TR:Q9JZH0 (EMBL:AE002456) (281 aa) fasta scores: E(): 9.7e-50, 45.77% id in 284 aa, and to Escherichia coli O157:H7 hypothetical 32.0 kDa protein Ecs4371 TR:BAB37794 (EMBL:AP002565) (280 aa) fasta scores: E(): 1.4e-45, 42.8% id in 271 aa
NP_880446.1	hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate
NP_880447.1	Similar to Escherichia coli peptidyl-prolyl cis-trans isomerase D PpiD or B0441 SW:PPID_ECOLI (P77241) (623 aa) fasta scores: E(): 2.9e-17, 26.07% id in 652 aa, and to Pseudomonas aeruginosa peptidyl-prolyl cis-trans isomerase D PpiD or Pa1805 TR:Q9I2T8 (EMBL:AE004606) (621 aa) fasta scores: E(): 6.5e-30, 31.49% id in 651 aa
NP_880448.1	Similar to Escherichia coli acyl-CoA thioesterase I precursor TesA or ApeA or PldC or B0494 SW:TESA_ECOLI (P29679) (208 aa) fasta scores: E(): 9.7e-24, 42.07% id in 183 aa, and to Pseudomonas aeruginosa acyl-CoA thioesterase I precursor TesA or Pa2856 TR:Q9HZY8 (EMBL:AE004712) (201 aa) fasta scores: E(): 2.1e-36, 56.28% id in 183 aa
NP_880449.1	transposase for IS481 element
NP_880450.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa4739 TR:Q9HV60 (EMBL:AE004887) (114 aa) fasta scores: E(): 2.6e-06, 40.18% id in 107 aa, and to the N-terminal region of Escherichia coli osmotically inducible protein Y precursor OsmY or B4376 SW:OSMY_ECOLI (P27291) (201 aa) fasta scores: E(): 5.6e-06, 33.33% id in 120 aa
NP_880451.1	Similar to Rhizobium loti Msr3702 protein TR:Q98FM7 (EMBL:AP003002) (54 aa) fasta scores: E(): 1.3e-08, 60.37% id in 53 aa, and to Pseudomonas aeruginosa hypothetical protein Pa5482 TR:Q9HT88 (EMBL:AE004961) (53 aa) fasta scores: E(): 4.5e-07, 63.46% id in 52 aa
NP_880452.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa4738 TR:Q9HV61 (EMBL:AE004887) (65 aa) fasta scores: E(): 1.5e-13, 60.93% id in 64 aa, and to Escherichia coli protein YjbJ or B4045 or Z5644 or ecs5028 SW:YJBJ_ECOLI (P32691) (69 aa) fasta scores: E(): 2.7e-10, 52.3% id in 65 aa
NP_880453.1	catalyze the formation of cyanophycin which may act to store excess nitrogen
NP_880454.1	catalyze the formation of cyanophycin which may act to store excess nitrogen
NP_880455.1	no significant database matches
NP_880456.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3230 TR:Q9HZ10 (EMBL:AE004746) (374 aa) fasta scores: E(): 1e-64, 46.88% id in 369 aa, and to Ralstonia solanacearum conserved hypothetical protein TR:CAD16055 (EMBL:AL646069) (408 aa) fasta scores: E(): 1.8e-74, 51.44% id in 381 aa
NP_880457.1	Similar to Neisseria meningitidis hypothetical protein Nmb0621 TR:Q9K0H9 (EMBL:AE002417) (275 aa) fasta scores: E(): 6.4e-40, 53.94% id in 241 aa, and to Pasteurella multocida hypothetical protein Pm0569 TR:Q9CN70 (EMBL:AE006092) (287 aa) fasta scores: E(): 7.4e-37, 52.83% id in 229 aa
NP_880458.1	Similar to Pseudomonas aeruginosa probable transglycolase Pa1171 TR:Q9I4G6 (EMBL:AE004547) (398 aa) fasta scores: E(): 2.8e-92, 62.46% id in 389 aa, and to Caulobacter crescentus peptidoglycan-binding protein, Cc3322 TR:Q9A382 (EMBL:AE005994) (433 aa) fasta scores: E(): 1.6e-49, 41.23% id in 388 aa
NP_880459.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3796 TR:Q9HXK1 (EMBL:AE004798) (195 aa) fasta scores: E(): 9.9e-12, 41.61% id in 149 aa, and to Escherichia coli hypothetical protein YidB or B3698 SW:YIDB_ECOLI (P09996) (132 aa) fasta scores: E(): 5.3e-05, 31.72% id in 145 aa
NP_880460.1	transposase for IS481 element
NP_880461.1	Similar to Rhizobium loti transcriptional regulator Mll7935 TR:Q984M5 (EMBL:AP003013) (159 aa) fasta scores: E(): 1.9e-15, 36.42% id in 151 aa, and to Agrobacterium tumefaciens StrC58 Agr_c_1339p TR:AAK86548 (EMBL:AE008008) (150 aa) fasta scores: E(): 8e-23, 45.27% id in 148 aa
NP_880462.1	Similar to Agrobacterium tumefaciens strC58 Agr_c_1338p TR:AAK86547 (EMBL:AE008008) (320 aa) fasta scores: E(): 1.6e-32, 33.44% id in 296 aa, and to Bacillus halodurans Bh3588 protein TR:Q9K6Y6 (EMBL:AP001519) (317 aa) fasta scores: E(): 1.1e-14, 26.35% id in 296 aa
NP_880463.1	catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine
NP_880464.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
NP_880465.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme
NP_880466.1	catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities
NP_880467.1	Similar to Ralstonia solanacearum hypothetical protein Rsc2453 or Rs01153 SWALL:Q8XWM1 (EMBL:AL646070) (417 aa) fasta scores: E(): 2.2e-77, 54.41% id in 419 aa, and to Neisseria meningitidis fmu and fmv protein, nmb1351 SWALL:Q9JZ03 (EMBL:AE002483) (418 aa) fasta scores: E(): 1e-67, 48.81% id in 420 aa
NP_880468.1	transposase for IS481 element
NP_880469.1	Similar to the N-terminal region of Escherichia coli PilL TR:AAL05516 (EMBL:AF399919) (357 aa) fasta scores: E(): 3.8, 33.01% id in 106 aa
NP_880470.1	Similar to Azotobacter vinelandii stearoyl-CoA desaturase TR:Q59162 (EMBL:U37517) (367 aa) fasta scores: E(): 7.8e-68, 47.7% id in 348 aa, and to Pseudomonas aeruginosa probable fatty acid desaturase pa0286 TR:Q9I6K4 (EMBL:AE004466) (392 aa) fasta scores: E(): 2.5e-79, 49.23% id in 392 aa
NP_880471.1	Similar to Escherichia coli DNA helicase II UvrD or MutU or PdeB or Rad or RecL or B3813 SW:UVRD_ECOLI (P03018) (720 aa) fasta scores: E(): 1.3e-94, 46.5% id in 772 aa, and to Neisseria meningitidis DNA helicase II Nmb0232 TR:Q9K1D0 (EMBL:AE002380) (735 aa) fasta scores: E(): 1.2e-108, 53.78% id in 766 aa
NP_880472.1	Similar to Pseudomonas aeruginosa probable siderophore receptor Pa1365 TR:Q9I3X9 (EMBL:AE004565) (813 aa) fasta scores: E(): 1.1e-08, 23.6% id in 771 aa, and to Escherichia coli hypothetical protein Yddb or B1495 SW:YDDB_ECOLI (P31827) (790 aa) fasta scores: E(): 3.1e-72, 32.65% id in 781 aa
NP_880473.1	Similar to Escherichia coli hypothetical ABC transporter ATP-binding protein YheS or B3352 or Z4713 or Ecs4203 SW:YHES_ECOLI (P45535) (637 aa) fasta scores: E(): 2.4e-90, 50.31% id in 632 aa, and to Pasteurella multocida hypothetical protein Pm1582 TR:Q9CKM9 (EMBL:AE006195) (640 aa) fasta scores: E(): 1.6e-89, 49.68% id in 638 aa
NP_880474.1	involved in methylation of ribosomal protein L3
NP_880475.1	dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.
NP_880476.1	catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway
NP_880477.1	no significant database matches. Similar to BP0266, BP2719, BP3099, BP3683, and BP3731
NP_880478.1	Identical to the previously sequenced Bordetella pertussis Phg protein TR:Q9Z5R3 (EMBL:AJ009835) (418 aa) fasta scores: E(): 1.6e-154, 100% id in 418 aa
NP_880479.1	no significant database matches
NP_880480.1	no significant database matches
NP_880481.1	Identical to the previously sequenced Bordetella pertussis cold shock-like protein CspA SW:CSPA_BORPE (Q9Z5R4) (67 aa) fasta scores: E(): 3.4e-26, 100% id in 67 aa, and similar to Ralstonia solanacearum probable cold shock-like CspC transcription regulator protein CspC TR:CAD16944 (EMBL:AL646074) (67 aa) fasta scores: E(): 5.5e-17, 67.69% id in 65 aa
NP_880482.1	Similar to Caulobacter crescentus hypothetical protein Cc2122 TR:Q9A6H2 (EMBL:AE005885) (187 aa) fasta scores: E(): 1.9e-37, 54.74% id in 179 aa, and to Rhizobium meliloti hypothetical protein Smc00282 TR:CAC46289 (EMBL:AL591788) (221 aa) fasta scores: E(): 5.3e-40, 54.25% id in 188 aa
NP_880483.1	Similar to Bordetella pertussis cold shock-like protein CspA SW:CSPA_BORPE (Q9Z5R4) (67 aa) fasta scores: E(): 1.2e-15, 71.66% id in 60 aa, and to Escherichia coli cold shock protein CspA or B3556 or Z4981 or Ecs4441 or Sty4153 SW:CSPA_ECOLI (P15277) (69 aa) fasta scores: E(): 6.2e-14, 68.42% id in 57 aa
NP_880484.1	Similar to Bradyrhizobium japonicum PipA TR:Q9L8L2 (EMBL:AF200320) (193 aa) fasta scores: E(): 1.6e-48, 76.16% id in 172 aa, and to Pasteurella multocida hypothetical protein Pm1258 SW:YC58_PASMU (P57929) (192 aa) fasta scores: E(): 4.5e-36, 56.52% id in 184 aa
NP_880485.1	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer
NP_880486.1	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates
NP_880487.1	binds and unfolds substrates as part of the ClpXP protease
NP_880488.1	Similar to Escherichia coli ATP-dependent protease La Lon or CapR or Deg or Muc or LopA or B0439 SW:LON_ECOLI (P08177) (784 aa) fasta scores: E(): 5.6e-127, 68.24% id in 781 aa, and to Neisseria meningitidis ATP-dependent protease La Lon or Nma1398 TR:Q9JUC0 (EMBL:AL162755) (820 aa) fasta scores: E(): 4.7e-177, 67.83% id in 799 aa
NP_880489.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa1826 TR:Q9I2R9 (EMBL:AE004609) (301 aa) fasta scores: E(): 5e-36, 43.19% id in 294 aa, and to Ralstonia solanacearum probable transcription regulator protein Rsp1326 TR:CAD18477 (EMBL:AL646084) (306 aa) fasta scores: E(): 1.2e-27, 38.17% id in 296 aa
NP_880490.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa0446 TR:Q9I672 (EMBL:AE004482) (407 aa) fasta scores: E(): 7.6e-94, 56.71% id in 402 aa, and to Acinetobacter spNCIMB9871 L-carnitine dehydrogenase-like protein Orf17 TR:BAB61747 (EMBL:AB026669) (405 aa) fasta scores: E(): 4.3e-82, 51.11% id in 405 aa. Also similar to BP0143 (68.059% identity in 407 aa overlap), and BP3309 (57.644% identity in 399 aa overlap).
NP_880491.1	Similar to Comamonas testosteroni Orf4 protein TR:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 6.8e-40, 39.93% id in 313 aa, and to Variovorax paradoxus, and 2,4-diphenoxyacetic acid gene cluster TR:AAK81675 (EMBL:AB028643) (337 aa) fasta scores: E(): 1.7e-32, 35.57% id in 312 aa
NP_880492.1	Similar to Rhizobium leguminosarum nodulation protein N NodN SW:NODN_RHILV (P08634) (161 aa) fasta scores: E(): 4e-18, 43.84% id in 130 aa, and to Mycobacterium tuberculosis hypothetical 16.0 kDa protein rv0130 or mtci5.04 TR:P96807 (EMBL:Z92770) (151 aa) fasta scores: E(): 6.5e-20, 48.43% id in 128 aa
NP_880493.1	Similar to Escherichia coli probable enoyl-CoA hydratase PaaG or B1394 SW:PAAG_ECOLI (P77467) (262 aa) fasta scores: E(): 4e-24, 38.79% id in 250 aa, and to Caulobacter crescentus enoyl-CoA hydratase/isomerase family protein cc2575 TR:Q9A582 (EMBL:AE005925) (265 aa) fasta scores: E(): 4.2e-25, 35.84% id in 265 aa
NP_880494.1	Similar to Pyrococcus abyssi AcaC protein or Pab0908 TR:Q9UYY6 (EMBL:AJ248287) (134 aa) fasta scores: E(): 1.3e-05, 29.83% id in 124 aa, and to Archaeoglobus fulgidus conserved hypothetical protein Af1292 TR:O28977 (EMBL:AE001015) (136 aa) fasta scores: E(): 3.8e-05, 29.66% id in 118 aa
NP_880495.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa1016 TR:Q9I4V7 (EMBL:AE004534) (383 aa) fasta scores: E(): 7.5e-88, 60.31% id in 378 aa, and to Methanothermobacter thermautotrophicus lipid-transfer protein Mth793 TR:O26884 (EMBL:AE000857) (383 aa) fasta scores: E(): 8e-31, 32.03% id in 384 aa
NP_880496.1	Similar to Escherichia coli 3-oxoacyl-[acyl-carrier protein] reductase FabG or B1093 SW:FABG_ECOLI (P25716) (244 aa) fasta scores: E(): 3.3e-24, 36.69% id in 248 aa, and to Thermotoga maritima 3-oxoacyl-[acyl-carrier protein] reductase FabG or Tm1724 SW:FABG_THEMA (Q9X248) (246 aa) fasta scores: E(): 2.2e-27, 41.5% id in 253 aa
NP_880497.1	Similar to Pseudomonas putida 3-oxoadipate CoA-transferase subunit A PcaI SW:PCAI_PSEPU (Q01103) (231 aa) fasta scores: E(): 1.9e-43, 52.51% id in 219 aa, and to Ralstonia solanacearum probable 3-oxoadipate CoA-transferase subunit A protein PcaI TR:CAD15961 (EMBL:AL646069) (229 aa) fasta scores: E(): 4.8e-44, 52.51% id in 219 aa. Also similar to BP0221 (50.228% identity in 219 aa overlap), and to BP2401 (46.083% identity in 217 aa overlap).
NP_880498.1	Similar to Pseudomonas putida 3-oxoadipate CoA-transferase subunit B PcaJ SW:PCAJ_PSEPU (Q01104) (212 aa) fasta scores: E(): 8.3e-38, 52.45% id in 204 aa, and to Caulobacter crescentus 3-oxoadipate CoA-transferase, beta subunit Cc0207 TR:Q9ABM0 (EMBL:AE005695) (213 aa) fasta scores: E(): 8e-36, 50.96% id in 208 aa. Also similar to BP222 (50.472% identity in 212 aa overlap), and to BP2400 (46.667% identity in 210 aa overlap).
NP_880499.1	transposase for IS481 element
NP_880500.1	Represses a number of genes involved in the response to DNA damage
NP_880501.1	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate
NP_880502.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
NP_880503.1	Similar to Streptomyces coelicolor low molecular weight protein-tyrosine-phosphatase PtpA or Scq11.04C SW:PTPA_STRCO (P53433) (164 aa) fasta scores: E(): 2.9e-20, 45.28% id in 159 aa, and to Pseudomonas aeruginosa phosphotyrosine protein phosphatase Pt or Pa2978 TR:Q9HZM6 (EMBL:AE004723) (154 aa) fasta scores: E(): 6.6e-27, 51.29% id in 154 aa
NP_880504.1	Similar to Ralstonia solanacearum conserved hypothetical protein Rsc1018 TR:CAD14720 (EMBL:AL646062) (193 aa) fasta scores: E(): 9.9e-42, 70.58% id in 170 aa, and to Neisseria meningitidis hypothetical protein Nma1593/Nmb1378 precursor Nma1593 or Nmb1378 SW:YF93_NEIMA (Q51134) (148 aa) fasta scores: E(): 6.3e-28, 60.87% id in 138 aa
NP_880505.1	catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis
NP_880506.1	Similar to Azotobacter vinelandii IscU TR:O31270 (EMBL:AF010139) (128 aa) fasta scores: E(): 1.3e-40, 81.74% id in 126 aa, and to Escherichia coli, and NifU-like protein NifU or B2529 or Z3796 or ecs3395 SW:NIFU_ECOLI (P77310) (128 aa) fasta scores: E(): 7.7e-42, 82.81% id in 128 aa
NP_880507.1	Similar to Azotobacter vinelandii IscA TR:O31271 (EMBL:AF010139) (107 aa) fasta scores: E(): 1.5e-28, 68.22% id in 107 aa, and to Pseudomonas aeruginosa probable iron-binding protein isca isca or pa3812 TR:Q9HXJ0 (EMBL:AE004799) (107 aa) fasta scores: E(): 1.5e-29, 71.02% id in 107 aa. Also similar to BP2958, 39.623% identity (40.000% ungapped) in 106 aa overlap.
NP_880508.1	J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins
NP_880509.1	involved in the maturation of iron-sulfur cluster-containing proteins
NP_880510.1	Similar to Escherichia coli ferredoxin, 2Fe-2S Fdx or B2525 or Z3792 or Ecs3391 TR:AAG57639 (EMBL:M88654) (111 aa) fasta scores: E(): 1.5e-28, 62.5% id in 112 aa, and to Neisseria meningitidis  ferredoxin Fdx or Nma1344 or Nmb1172 TR:Q9JQT7 (EMBL:AL162755) (113 aa) fasta scores: E(): 7.3e-33, 67.25% id in 113 aa. Also similar to BP3174, 63.964% identity (64.545% ungapped) in 111 aa overlap.
NP_880511.1	Similar to Azotobacter vinelandii hypothetical 7.9 kDa protein TR:O69223 (EMBL:AF010139) (68 aa) fasta scores: E(): 1.3e-14, 62.5% id in 64 aa, and to Neisseria meningitidis hypothetical protein Nma1347 or Nmb1175 TR:Q9JR02 (EMBL:AL162755) (65 aa) fasta scores: E(): 9.5e-14, 60% id in 65 aa
NP_880512.1	The C-terminal region of this CDS is similar to Brucella abortus methylglyoxal synthase MgsA SW:MGSA_BRUAB (Q44615) (125 aa) fasta scores: E(): 3.6e-10, 41.12% id in 124 aa, and to Rhizobium meliloti probable methylglyoxal synthase TR:CAC41545 (EMBL:AL591782) (126 aa) fasta scores: E(): 1.1e-07, 40.95% id in 105 aa
NP_880513.1	transposase for IS481 element
NP_880514.1	Similar to Escherichia coli probable enoyl-CoA hydratase PaaG or B1394 SW:PAAG_ECOLI (P77467) (262 aa) fasta scores: E(): 2.3e-24, 38.79% id in 250 aa, and to Rhizobium meliloti  enoyl-CoA hydratase TR:Q92TG7 (EMBL:AL603647) (263 aa) fasta scores: E(): 7.3e-25, 37.73% id in 265 aa
NP_880515.1	transposase for IS481 element
NP_880516.1	transposase for IS481 element
NP_880517.1	Similar to Rhizobium meliloti hypothetical protein Smb20670 TR:CAC49777 (EMBL:AL603646) (425 aa) fasta scores: E(): 4.8e-08, 30.02% id in 433 aa, and to Escherichia coli hypothetical protein YgbK or B2737 SW:YGBK_ECOLI (Q46889) (388 aa) fasta scores: E(): 2.1e-07, 28.98% id in 383 aa
NP_880518.1	Similar to Escherichia coli pyridoxal phosphate biosynthetic protein PdxA or B0052 SW:PDXA_ECOLI (P19624) (329 aa) fasta scores: E(): 1.2e-18, 31.7% id in 287 aa, and to Caulobacter crescentus pyridoxal phosphate biosynthetic protein PdxA Cc1686 TR:Q9A7N4 (EMBL:AE005843) (333 aa) fasta scores: E(): 1.1e-26, 36.33% id in 333 aa. Also similar to BP2789, 46.233% identity (49.451% ungapped) in 292 aa overlap.
NP_880519.1	Similar to Rhizobium meliloti  transcription regulator protein Smc02340 TR:CAC47147 (EMBL:AL591791) (244 aa) fasta scores: E(): 3.8e-18, 33.47% id in 239 aa, and to Deinococcus radiodurans transcriptional regulator, GntR family Dra0211 TR:Q9RYU6 (EMBL:AE001863) (279 aa) fasta scores: E(): 3.8e-17, 37.7% id in 244 aa
NP_880520.1	Similar to Rhizobium meliloti hypothetical protein Smc02631 TR:CAC45671 (EMBL:AL591786) (283 aa) fasta scores: E(): 1e-13, 36.45% id in 288 aa, and to Streptomyces coelicolor conserved hypothetical protein 2 Scd46.31C TR:Q9FCF3 (EMBL:AL391406) (294 aa) fasta scores: E(): 4.9e-13, 34.89% id in 298 aa
NP_880521.1	Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5)
NP_880522.1	catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose
NP_880523.1	Similar to Escherichia coli D-amino acid dehydrogenase small subunit DadA or DadR or B1189 or Z1952 or Ecs1684 SW:DADA_ECOLI (P29011) (432 aa) fasta scores: E(): 4.2e-68, 45.14% id in 412 aa, and to Salmonella typhimurium LT2 D-amino acid dehydrogenase subunit DadA TR:AAL20718 (EMBL:AE008780) (432 aa) fasta scores: E(): 3.7e-68, 44.63% id in 410 aa. Also similar to BP2634, 42.079% identity in 404 aa overlap
NP_880524.1	Similar to Escherichia coli glycerol-3-phosphate-binding periplasmic protein precursor UgpB or B3453 or Z4822 or Ecs4299 SW:UGPB_ECOLI (P10904) (438 aa) fasta scores: E(): 5.3e-42, 30.76% id in 429 aa, and to Yersinia pestis glycerol-3-phosphate-binding periplasmic protein UgpB TR:CAC93263 (EMBL:AJ414159) (439 aa) fasta scores: E(): 1.7e-43, 32.54% id in 424 aa
NP_880525.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa1998 TR:Q9I2B1 (EMBL:AE004626) (306 aa) fasta scores: E(): 4.7e-30, 36.3% id in 314 aa, and to Rhizobium loti transcriptional regulator Mlr6981 TR:Q987N6 (EMBL:AP003010) (299 aa) fasta scores: E(): 1.1e-28, 36.23% id in 287 aa
NP_880527.1	Similar to Rhizobium sp probable peptide ABC transporter periplasmic binding protein Y4tO precursor y4tO SW:Y4TO_RHISN (P55669) (531 aa) fasta scores: E(): 2e-70, 39.92% id in 521 aa, and to Bradyrhizobium japonicum  ABC transporter TR:Q9RH65 (EMBL:AF065159) (516 aa) fasta scores: E(): 1.5e-64, 38.35% id in 524 aa
NP_880528.1	Similar to Rhizobium sp probable peptide ABC transporter permease Y4tP SW:Y4TP_RHISN (Q53191) (313 aa) fasta scores: E(): 7e-57, 48.89% id in 317 aa, and to Rhizobium loti ABC transporter permease Mlr6289 TR:Q989T3 (EMBL:AP003008) (314 aa) fasta scores: E(): 9.3e-54, 45.36% id in 313 aa
NP_880529.1	Similar to Rhizobium sp probable peptide ABC transporter permease Y4tQ SW:Y4TQ_RHISN (Q53192) (291 aa) fasta scores: E(): 1e-49, 52.96% id in 270 aa, and to Rhizobium loti ABC transporter permease Mlr6290 TR:Q989T2 (EMBL:AP003008) (280 aa) fasta scores: E(): 5.1e-46, 49.8% id in 261 aa
NP_880530.1	Similar to Rhizobium meliloti probable ABC transporter ATP-binding protein Sma1434 TR:AAK65441 (EMBL:AE007265) (550 aa) fasta scores: E(): 4.3e-80, 48.08% id in 549 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter Pa2061 TR:Q9I254 (EMBL:AE004632) (536 aa) fasta scores: E(): 1.5e-76, 49.24% id in 526 aa
NP_880531.1	Similar to Pseudomonas putida amidase SW:AMID_PSEPU (O69768) (466 aa) fasta scores: E(): 2e-26, 32.39% id in 460 aa, and to Rhizobium meliloti  amidase Smc02881 TR:CAC41593 (EMBL:AL591782) (453 aa) fasta scores: E(): 2.4e-38, 35.57% id in 447 aa
NP_880532.1	Similar to Escherichia coli lipoprotein PilN TR:O07372 (EMBL:AB021078) (560 aa) fasta scores: E(): 2.3e-11, 24.69% id in 567 aa
NP_880533.1	no significant database matches
NP_880534.1	The N-terminal region of this CDS is similar to Streptomyces coelicolor hypothetical 7.7 kDa protein Sc7h1.36C TR:O54195 (EMBL:AL021411) (81 aa) fasta scores: E(): 0.24, 45.45% id in 66 aa
NP_880535.1	Similar to Escherichia coli integral membrane protein PilR TR:O07376 (EMBL:AB021078) (365 aa) fasta scores: E(): 3.3e-06, 24.07% id in 353 aa, and to Caulobacter crescentus general secretion pathway protein F Cc0175 TR:Q9ABQ1 (EMBL:AE005692) (403 aa) fasta scores: E(): 0.052, 23.94% id in 355 aa
NP_880536.1	Similar to Escherichia coli type IV prepilin PilS TR:O88170 (EMBL:AB007463) (204 aa) fasta scores: E(): 0.62, 24.49% id in 196 aa, and to Salmonella typhi PilS protein TR:Q9ZIU9 (EMBL:AF000001) (206 aa) fasta scores: E(): 0.71, 29.78% id in 188 aa
NP_880537.1	no significant database matches
NP_880538.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_880539.1	Similar to Neisseria meningitidis hypothetical protein Nma0882 or Nmb0681 SW:Y882_NEIMA (Q9JR98) (74 aa) fasta scores: E(): 1.1e-10, 61.66% id in 60 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1006 TR:Q9I4W7 (EMBL:AE004533) (83 aa) fasta scores: E(): 1.6e-10, 45.23% id in 84 aa
NP_880540.1	Weakly similar to Bacillus subtilis endoglucanase precursor TR:Q03882 (EMBL:M38634) (148 aa) fasta scores: E(): 4, 26.71% id in 131 aa
NP_880541.1	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity
NP_880542.1	Essential for efficient processing of 16S rRNA
NP_880543.1	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
NP_880544.1	Similar to Escherichia coli selenocysteine lyase CsdB or SufS or B1680 SW:CSDB_ECOLI (P77444) (406 aa) fasta scores: E(): 1.3e-18, 29.57% id in 355 aa, and to Streptomyces capreolus capreomycin acetyltransferase Cac TR:Q53824 (EMBL:U13077) (359 aa) fasta scores: E(): 8.9e-38, 39.33% id in 361 aa
NP_880545.1	Similar to Rhizobium meliloti hypothetical protein Smc02103 TR:CAC46072 (EMBL:AL591787) (154 aa) fasta scores: E(): 2.4e-22, 50% id in 156 aa, and to Agrobacterium tumefaciens strC58 Agr_c_2535p TR:AAK87164 (EMBL:AE008063) (156 aa) fasta scores: E(): 8.6e-21, 46.75% id in 154 aa
NP_880546.1	transposase for IS481 element
NP_880547.1	Similar to Escherichia coli unknown protein from 2D-PAGE YgfZ or B2898 SW:UP14_ECOLI (P39179) (325 aa) fasta scores: E(): 7.2e-17, 31.3% id in 345 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0759 TR:Q9I5H0 (EMBL:AE004511) (314 aa) fasta scores: E(): 1.6e-13, 32.91% id in 316 aa
NP_880548.1	Similar to Ralstonia solanacearum conserved hypothetical protein Rsc1783 TR:CAD15485 (EMBL:AL646066) (377 aa) fasta scores: E(): 1.8e-60, 50% id in 334 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2963 TR:Q9HZN7 (EMBL:AE004722) (349 aa) fasta scores: E(): 3.3e-46, 44.27% id in 332 aa
NP_880549.1	catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP)
NP_880550.1	Similar to Escherichia coli DNA polymerase III, delta' subunit HolB or B1099 SW:HOLB_ECOLI (P28631) (334 aa) fasta scores: E(): 8e-10, 29.94% id in 354 aa, and to Neisseria meningitidis  DNA polymerase III, delta' subunit HolB or Nma0980 TR:Q9JV62 (EMBL:AL162754) (325 aa) fasta scores: E(): 3.6e-17, 34.4% id in 343 aa
NP_880551.1	Similar to Neisseria meningitidis hypothetical protein Nmb0771 TR:Q9K050 (EMBL:AE002431) (259 aa) fasta scores: E(): 1.5e-44, 50% id in 252 aa, and to Vibrio cholerae hypothetical protein Vc2014 TR:Q9KQI4 (EMBL:AE004276) (255 aa) fasta scores: E(): 1.7e-43, 49.8% id in 255 aa
NP_880552.1	Similar to Chromatium vinosum ankyrin homolog precursor SW:ANKH_CHRVI (Q06527) (323 aa) fasta scores: E(): 3.1e-09, 32.87% id in 219 aa
NP_880553.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa3174 TR:Q9HZ60 (EMBL:AE004741) (242 aa) fasta scores: E(): 1e-28, 41.77% id in 237 aa, and to Vibrio cholerae transcriptional regulator,  Vca0029 TR:Q9KND6 (EMBL:AE004346) (244 aa) fasta scores: E(): 2.7e-19, 34.02% id in 241 aa
NP_880554.1	Similar to Escherichia coli glutamine-binding periplasmic protein precursor GlnH or B0811 or Z1033 or Ecs0889 SW:GLNH_ECOLI (P10344) (248 aa) fasta scores: E(): 5.1e-24, 36% id in 250 aa, and to Yersinia pestis glutamine-binding periplasmic protein glnH TR:CAC91317 (EMBL:AJ414152) (247 aa) fasta scores: E(): 9.6e-25, 38.79% id in 250 aa
NP_880555.1	Similar to Bacillus stearothermophilus glutamine transport ATP-binding protein GlnQ SW:GLNQ_BACST (P27675) (242 aa) fasta scores: E(): 1.3e-40, 52.84% id in 246 aa, and to Archaeoglobus fulgidus glutamine ABC transporter ATP-binding protein af0680 TR:O29577 (EMBL:AE001058) (242 aa) fasta scores: E(): 5.3e-44, 59.83% id in 244 aa. Similar to several B. pertussis CDSs: BP1181, P3828, BP1534, BP0054, BP1575, BP1362, P0768, and BP1510.
NP_880556.1	Similar to Thermotoga maritima glutamate dehydrogenase GdhA or Gdh or Tm1015 SW:DHE3_THEMA (P96110) (415 aa) fasta scores: E(): 2.3e-86, 55.17% id in 406 aa, and to Deinococcus radiodurans glutamate dehydrogenase, Dr0980 TR:Q9RVP5 (EMBL:AE001950) (392 aa) fasta scores: E(): 3.4e-85, 67.08% id in 322 aa
NP_880557.1	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide
NP_880558.1	catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit
NP_880559.1	Similar to Escherichia coli citrate lyase beta chain CitE or B0616 SW:CILB_ECOLI (P77770) (302 aa) fasta scores: E(): 4.8e-19, 31.48% id in 289 aa, and to Salmonella enteritidis CitE TR:AAK97548 (EMBL:AF376036) (280 aa) fasta scores: E(): 3.7e-18, 30.96% id in 281 aa
NP_880560.1	Similar to Rhizobium meliloti  C4-dicarboxylate transport system, permease large protein transmembrane Smb21436 TR:CAC49665 (EMBL:AL603646) (426 aa) fasta scores: E(): 1.5e-80, 54.97% id in 422 aa, and to Caulobacter crescentus DedA family protein Cc1448 TR:Q9A8A6 (EMBL:AE005819) (426 aa) fasta scores: E(): 8.7e-55, 39.37% id in 419 aa
NP_880561.1	Similar to Rhizobium meliloti  C4-dicarboxylate transport system, permease small protein transmembrane Smb21437 TR:CAC49666 (EMBL:AL603646) (186 aa) fasta scores: E(): 1.7e-15, 40.13% id in 147 aa, and to Agrobacterium tumefaciens strC58 Agr_l_3346p TR:AAK90250 (EMBL:AE008369) (183 aa) fasta scores: E(): 1.8e-05, 27.04% id in 159 aa
NP_880562.1	Similar to Rhizobium meliloti  C4-dicarboxylate transport system, C4-dicarboxylate-binding protein precursor signal peptide Smb21438 TR:Q926B4 (EMBL:AL603646) (332 aa) fasta scores: E(): 1.1e-71, 56.44% id in 326 aa, and to Pasteurella multocida hypothetical protein Pm1252 TR:Q9CLH9 (EMBL:AE006164) (328 aa) fasta scores: E(): 6.7e-35, 33.75% id in 320 aa
NP_880563.1	Similar to Erwinia chrysanthemi exu regulon transcriptional regulator ExuR SW:EXUR_ERWCH (Q9X9E0) (259 aa) fasta scores: E(): 1.5e-19, 34.57% id in 214 aa, and to Rhizobium meliloti  transcriptional regulator protein Smb20441 TR:CAC48823 (EMBL:AL603643) (246 aa) fasta scores: E(): 3.4e-23, 40% id in 235 aa
NP_880564.1	transposase for IS481 element
NP_880566.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
NP_880567.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa2116 TR:Q9I1Z9 (EMBL:AE004639) (265 aa) fasta scores: E(): 3e-59, 63.11% id in 244 aa, and to Bacillus subtilis hypothetical 28.1 kDa protein in sipU-kipI intergenic region YcsI SW:YCSI_BACSU (P42966) (257 aa) fasta scores: E(): 1.7e-57, 56.8% id in 257 aa
NP_880568.1	Previously sequenced as Bordetella pertussis BvgR TR:O85677 (EMBL:AF071567) (291 aa) fasta scores: E(): 5.1e-121, 100% id in 291 aa
NP_880569.1	Previously sequenced as Bordetella pertussis virulence sensor protein BvgS precursor bvgS SW:BVGS_BORPE (P16575) (1238 aa) fasta scores: E(): 0, 99.83% id in 1238 aa
NP_880570.1	Previously sequenced as Bordetella pertussis virulence factors  positive transcription regulator BvgA bvgA SW:BVGA_BORPE (P16574) (209 aa) fasta scores: E(): 3e-77, 100% id in 209 aa
NP_880571.1	Previously sequenced as Bordetella pertussis filamentous hemagglutinin FhaB or BP1879 SW:FHAB_BORPE (P12255) (3591 aa) fasta scores: E(): 0, 99.91% id in 3573 aa. Also similar to Bordetella bronchiseptica adhesin FhaB TR:Q9JP78 (EMBL:AF111796) (3634 aa) fasta scores: E(): 0, 92.38% id in 3639 aa. The product of this CDS is also similar to B. pertussis BP2667 E(): 9.8e-120 37.940% identity in 2670 aa and BP2907 fasta scores: E(): 9e-125, 33.52% id in 2750 aa.
NP_880572.1	Previously sequenced as Bordetella pertussis chaperone protein fimb/fhad precursor fimb or fhaD SW:FIMB_BORPE (P33409) (244 aa) fasta scores: E(): 2.6e-99, 99.59% id in 244 aa
NP_880573.1	Previously sequenced as Bordetella pertussis outer membrane usher protein FimC precursor FimC or fhaA SW:FIMC_BORPE (P33410) (873 aa) fasta scores: E(): 0, 100% id in 873 aa
NP_880574.1	Previously sequenced as Bordetella pertussis protein FhaE precursor FhaE or FimD SW:FHAE_BORPE (Q00879) (376 aa) fasta scores: E(): 1.9e-143, 100% id in 365 aa
NP_880575.1	Previously sequenced as Bordetella pertussis hemolysin activator-like protein FhaC precursor fhaC SW:FHAC_BORPE (P35077) (584 aa) fasta scores: E(): 0, 100% id in 584 aa, and to Bordetella bronchiseptica FhaC TR:Q9RGR3 (EMBL:AF111795) (583 aa) fasta scores: E(): 0, 97.43% id in 584 aa
NP_880576.1	Similar to Pseudomonas spDJ-1. transmembrane protein FcbT2 TR:Q9RBR0 (EMBL:AF051771) (181 aa) fasta scores: E(): 0.011, 26.89% id in 145 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3780 TR:Q9HXL5 (EMBL:AE004797) (164 aa) fasta scores: E(): 0.31, 27.21% id in 147 aa
NP_880577.1	Similar to Ralstonia solanacearum  signal peptide protein Rsc2166 TR:CAD15873 (EMBL:AL646068) (339 aa) fasta scores: E(): 4.6e-38, 34.37% id in 320 aa, and to Pasteurella multocida hypothetical protein Pm1252 TR:Q9CLH9 (EMBL:AE006164) (328 aa) fasta scores: E(): 1.3e-11, 26.23% id in 324 aa
NP_880578.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3780 TR:Q9HXL5 (EMBL:AE004797) (164 aa) fasta scores: E(): 1e-05, 32.05% id in 156 aa, and to Pseudomonas spDJ-12 transmembrane protein FcbT2 TR:Q9RBR0 (EMBL:AF051771) (181 aa) fasta scores: E(): 1.2e-06, 31.12% id in 151 aa
NP_880579.1	Similar to Ralstonia solanacearum  signal peptide protein Rsc2510 TR:CAD16217 (EMBL:AL646070) (338 aa) fasta scores: E(): 3.2e-27, 30.15% id in 325 aa, and to Salmonella typhimurium LT2  dicarboxylate-binding periplasmic protein Stm3169 TR:AAL22043 (EMBL:AE008845) (327 aa) fasta scores: E(): 3.1e-11, 25.62% id in 281 aa
NP_880580.1	Similar to Agrobacterium tumefaciens strC58 Agr_l_563p TR:AAK88851 (EMBL:AE008228) (228 aa) fasta scores: E(): 1.7e-09, 29.25% id in 188 aa
NP_880581.1	Similar to Agrobacterium tumefaciens StrC58 Agr_c_1544p TR:AAK86653 (EMBL:AE008017) (152 aa) fasta scores: E(): 0.22, 28.47% id in 144 aa, and to Agrobacterium tumefaciens StrC58 Agr_pat_395p TR:AAK90650 (EMBL:AE007897) (147 aa) fasta scores: E(): 1.6, 26.81% id in 138 aa
NP_880582.1	Similar to Rattus norvegicus 5-oxoprolinase OplaH SW:OPLA_RAT (P97608) (1288 aa) fasta scores: E(): 3.5e-94, 45.17% id in 1264 aa, and to Rhizobium loti 5-oxoprolinase Mlr1573 TR:Q98K99 (EMBL:AP002997) (1210 aa) fasta scores: E(): 0, 59.37% id in 1216 aa
NP_880583.1	Similar to Ralstonia solanacearum conserved hypothetical protein Rsc1742 TR:CAD15444 (EMBL:AL646066) (350 aa) fasta scores: E(): 2.1e-57, 46.84% id in 333 aa, and to Emericella nidulans acyl-coenzyme acyl coenzyme A:6-aminopenicillanic-acid-acyltransferase precursor PendE or Aat SW:AAAA_EMENI (P21133) (357 aa) fasta scores: E(): 4.9e-06, 24.31% id in 329 aa
NP_880584.1	Similar to Agrobacterium tumefaciens StrC58 Agr_c_1937p TR:AAK86858 (EMBL:AE008035) (273 aa) fasta scores: E(): 3.7e-33, 44.39% id in 232 aa, and to Rhizobium loti Mlr4006 protein TR:Q98EZ8 (EMBL:AP003003) (283 aa) fasta scores: E(): 1.4e-30, 39.23% id in 260 aa
NP_880585.1	Similar to Rhizobium meliloti  transcription regulator protein Smc00263 TR:Q92PP5 (EMBL:AL591788) (282 aa) fasta scores: E(): 6.2e-22, 36.03% id in 247 aa, and to Rhizobium loti transcription regulator Mll9009 TR:Q982L6 (EMBL:AP003015) (269 aa) fasta scores: E(): 1.6e-15, 32.89% id in 228 aa
NP_880586.1	Similar to Rhizobium meliloti hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.1e-55, 48.32% id in 329 aa, and to Agrobacterium tumefaciens StrC58 Agr_l_312p TR:AAK88723 (EMBL:AE008213) (329 aa) fasta scores: E(): 2.7e-52, 46.6% id in 324 aa
NP_880587.1	Similar to Pseudomonas aeruginosa probable methyltransferase Pa3817 TR:Q9HXI5 (EMBL:AE004799) (257 aa) fasta scores: E(): 2.5e-30, 41.93% id in 248 aa, and to Azotobacter vinelandii hypothetical 28.2 kDa protein TR:O69217 (EMBL:AF010139) (257 aa) fasta scores: E(): 1e-28, 41.15% id in 243 aa
NP_880588.1	Similar to Escherichia coli extragenic suppressor protein SuhB or SsyA or b2533 SW:SUHB_ECOLI (P22783) (267 aa) fasta scores: E(): 3.2e-41, 46.33% id in 259 aa, and to Ralstonia solanacearum probable inositol monophosphatase suhB TR:CAD14862 (EMBL:AL646063) (270 aa) fasta scores: E(): 7.4e-54, 55.34% id in 262 aa. Also similar to BP2813, 40.000% identity (43.200% ungapped) in 270 aa overlap
NP_880589.1	Similar to Salmonella enterica subspenterica serovar Typhi  membrane protein Sty1958 TR:CAD05511 (EMBL:AL627272) (519 aa) fasta scores: E(): 1e-110, 59.22% id in 515 aa, and to Escherichia coli hypothetical protein YoaE or B1816 or Z2859 or Ecs2525 SW:YOAE_ECOLI (P76262) (518 aa) fasta scores: E(): 6.4e-109, 57.87% id in 527 aa
NP_880590.1	BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell
NP_880591.1	catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine
NP_880592.1	Similar to Escherichia coli peptidyl-prolyl cis-trans isomerase B ppiB or B0525 SW:PPIB_ECOLI (P23869) (164 aa) fasta scores: E(): 2.3e-41, 66.87% id in 163 aa, and to Ralstonia solanacearum probable peptidyl-prolyl cis-trans isomerase B PpiB TR:CAD14866 (EMBL:AL646063) (179 aa) fasta scores: E(): 1.8e-49, 75.73% id in 169 aa
NP_880593.1	Similar to Rhodobacter sphaeroides hypothetical 21.1 kDa protein  Orf TR:Q53172 (EMBL:Z50182) (197 aa) fasta scores: E(): 0.41, 29.33% id in 150 aa, and to Desulfotomaculum thermocisternum hypothetical 25.2 kDa protein TR:Q9ZH15 (EMBL:AF074396) (224 aa) fasta scores: E(): 0.098, 25.98% id in 127 aa
NP_880594.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
NP_880595.1	Similar to Schizosaccharomyces pombe DNA-3-methyladenine glycosylase Mag1 or Spapb24d3.04C SW:MAG1_SCHPO (Q92383) (228 aa) fasta scores: E(): 2e-16, 34.84% id in 198 aa, and to Halobacterium sp 3-methyladenine DNA glycosylase AlkA or Vng1311G TR:Q9HQ62 (EMBL:AE005053) (191 aa) fasta scores: E(): 5.2e-20, 38.74% id in 191 aa
NP_880596.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein
NP_880597.1	transposase for IS481 element
NP_880598.1	Similar to Escherichia coli  cell cycle protein MesJ or B0188 SW:MESJ_ECOLI (P52097) (432 aa) fasta scores: E(): 8e-17, 34.89% id in 278 aa, and to Ralstonia solanacearum  cell cycle protein MesJ TR:CAD14872 (EMBL:AL646063) (462 aa) fasta scores: E(): 8.5e-28, 43.55% id in 326 aa
NP_880599.1	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.
NP_880600.1	Similar to Neisseria meningitidis invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter spSE19. pilin inverting protein ChnY TR:Q9F7E1 (EMBL:AF282240) (324 aa) fasta scores: E(): 8.2e-50, 47.516% id in 322 aa
NP_880601.1	Similar to Streptomyces glaucescens tetracenomycin polyketide synthesis protein TcmJ SW:TCMJ_STRGA (P16558) (149 aa) fasta scores: E(): 0.00089, 26.84% id in 149 aa, and to Streptomyces coelicolor 16.7 kDa protein in whie locus Sc6g9.14 SW:WH16_STRCO (P23157) (157 aa) fasta scores: E(): 1.1e-05, 34.4% id in 93 aa
NP_880602.1	Similar to Rhizobium meliloti hypothetical protein Sma0797 TR:AAK65090 (EMBL:AE007233) (108 aa) fasta scores: E(): 8.5e-16, 42.15% id in 102 aa, and to Agrobacterium tumefaciens StrC58 Agr_l_1239p TR:AAK89197 (EMBL:AE008260) (104 aa) fasta scores: E(): 2.3e-17, 42.71% id in 103 aa
NP_880603.1	Converts (S)-3-hydroxyactk-CoA to 3-oxoayl-CoA
NP_880604.1	Similar to Bacillus halodurans C4-dicarboxylate transport system Bh2672 TR:Q9K9H5 (EMBL:AP001516) (183 aa) fasta scores: E(): 1.4e-07, 29.6% id in 152 aa, and to Agrobacterium tumefaciens StrC58 Agr_l_3346p TR:AAK90250 (EMBL:AE008369) (183 aa) fasta scores: E(): 2.4e-06, 30.3% id in 165 aa
NP_880605.1	Similar to Pasteurella multocida hypothetical protein Pm0273 TR:Q9CNZ7 (EMBL:AE006062) (427 aa) fasta scores: E(): 1.8e-62, 43.91% id in 419 aa, and to Bacillus halodurans C4-dicarboxylate transport system bh2671 TR:Q9K9H6 (EMBL:AP001516) (426 aa) fasta scores: E(): 4.3e-65, 46.77% id in 419 aa
NP_880606.1	Similar to Rhizobium meliloti  ABC transporter periplasmic solute-binding protein Smb20036 TR:CAC48439 (EMBL:AL603642) (338 aa) fasta scores: E(): 4.7e-25, 32.12% id in 330 aa, and to Bacillus halodurans C4-dicarboxylate transport system bh0701 TR:Q9KEZ8 (EMBL:AP001509) (341 aa) fasta scores: E(): 2.1e-23, 31.2% id in 282 aa
NP_880607.1	Similar to Kurthia sp538-KA26 BioH TR:Q9AJM9 (EMBL:AB045874) (267 aa) fasta scores: E(): 1.4e-15, 30.36% id in 247 aa, and to Caulobacter crescentus hydrolase, alpha/beta hydrolase fold family Cc2797 TR:Q9A4N3 (EMBL:AE005945) (269 aa) fasta scores: E(): 6.7e-19, 36.54% id in 249 aa
NP_880608.1	catalyzes the formation of L-aspartate to iminoaspartate in NAD(+) biosynthesis
NP_880609.1	Similar to Brevibacterium spHCU cyclohexanol dehydrogenase ChnA TR:AAK73164 (EMBL:AF257214) (256 aa) fasta scores: E(): 8.4e-30, 42.29% id in 253 aa, and to Streptomyces coelicolor probable oxidoreductase Scf41.15 TR:Q9RJV4 (EMBL:AL117387) (263 aa) fasta scores: E(): 2.4e-31, 45.23% id in 252 aa
NP_880610.1	Similar to Burkholderia pseudomallei regulator AmrR TR:O87934 (EMBL:AF072887) (187 aa) fasta scores: E(): 0.18, 26.11% id in 180 aa, and to Agrobacterium tumefaciens StrC58 Agr_c_1821p TR:AAK86802 (EMBL:AE008030) (208 aa) fasta scores: E(): 0.092, 24.36% id in 197 aa
NP_880611.1	Similar to Escherichia coli transcriptional activator protein LysR or B2839 SW:LYSR_ECOLI (P03030) (311 aa) fasta scores: E(): 1.7e-20, 30.63% id in 284 aa, and to Rhizobium loti transcriptional regulator Mlr7023 TR:Q987J8 (EMBL:AP003010) (301 aa) fasta scores: E(): 1.9e-20, 31.72% id in 290 aa
NP_880612.1	Similar to Rhizobium loti ABC transporter binding protein Mlr7676 TR:Q985H2 (EMBL:AP003012) (370 aa) fasta scores: E(): 5.6e-54, 41.92% id in 353 aa, and to Agrobacterium tumefaciens StrC58 Agr_l_1237p TR:AAK89196 (EMBL:AE008260) (336 aa) fasta scores: E(): 7.3e-34, 34.81% id in 316 aa
NP_880613.1	Similar to Rhizobium loti ABC transporter permease Mlr7677 TR:Q985H1 (EMBL:AP003012) (277 aa) fasta scores: E(): 3.1e-35, 39.62% id in 265 aa, and to Rhizobium loti Mll2950 protein TR:Q98HA9 (EMBL:AP003000) (294 aa) fasta scores: E(): 3.3e-35, 41.98% id in 262 aa
NP_880614.1	Similar to Rhizobium loti ABC transporter permease Mll2949 TR:Q98HB0 (EMBL:AP003000) (265 aa) fasta scores: E(): 3.9e-31, 40.4% id in 250 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter Pa0606 TR:Q9I5T2 (EMBL:AE004497) (276 aa) fasta scores: E(): 3.3e-30, 38.4% id in 263 aa
NP_880615.1	Similar to Rhizobium loti ABC transporter ATP-binding protein Mll2948 TR:Q98HB1 (EMBL:AP003000) (371 aa) fasta scores: E(): 3.5e-46, 43.86% id in 367 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter Pa0603 TR:Q9I5T5 (EMBL:AE004496) (369 aa) fasta scores: E(): 8.6e-46, 43.37% id in 362 aa
NP_880616.1	Similar to Vibrio cholerae NADH-dependent flavin oxidoreductase, Oye family Vca0998 TR:Q9KKV2 (EMBL:AE004426) (347 aa) fasta scores: E(): 1.1e-27, 35.46% id in 344 aa, and to Xylella fastidiosa NAD Xf1732 TR:Q9PCP6 (EMBL:AE003996) (368 aa) fasta scores: E(): 5.4e-26, 35.92% id in 348 aa
NP_880617.1	Similar to Pseudomonas mendocina pimeloyl-CoA synthetase TR:Q9ZER2 (EMBL:AJ012480) (711 aa) fasta scores: E(): 1.5e-62, 35.15% id in 694 aa, and to Pseudomonas aeruginosa pimeloyl-CoA synthetase pa1017 TR:Q9I4V6 (EMBL:AE004534) (715 aa) fasta scores: E(): 1.1e-62, 34.97% id in 712 aa
NP_880618.1	Similar to Rhizobium meliloti hypothetical protein Sma1927 TR:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.1e-48, 47.26% id in 311 aa, and to Agrobacterium tumefaciens StrC58 Agr_l_312p TR:AAK88723 (EMBL:AE008213) (329 aa) fasta scores: E(): 3.6e-43, 41.08% id in 314 aa
NP_880619.1	Similar to Rhizobium meliloti hypothetical protein Sma2289 TR:AAK65890 (EMBL:AE007308) (130 aa) fasta scores: E(): 2.1e-10, 34.4% id in 125 aa, and to Streptomyces coelicolor conserved hypothetical protein Sc9c7.14C TR:Q9ZBJ6 (EMBL:AL035161) (132 aa) fasta scores: E(): 2e-09, 37.81% id in 119 aa
NP_880620.1	Similar to Streptomyces coelicolor hypothetical 15.2 kDa protein Scd82.08 TR:Q9L0M3 (EMBL:AL160431) (142 aa) fasta scores: E(): 0.0063, 26.38% id in 144 aa
NP_880621.1	no significant database matches
NP_880622.1	no significant database matches
NP_880623.1	Similar to Rhizobium meliloti  transcription regulator protein Smc01226 TR:CAC46144 (EMBL:AL591787) (96 aa) fasta scores: E(): 1.5e-27, 72.04% id in 93 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4354 R:Q9HW47 (EMBL:AE004851) (100 aa) fasta scores: E(): 1.6e-23, 60% id in 100 aa
NP_880624.1	Similar to Escherichia coli N-ethylmaleimide reductase NemA or B1650 SW:NEMA_ECOLI (P77258) (365 aa) fasta scores: E(): 7.3e-64, 51.74% id in 373 aa, and to Rhizobium loti morphinone reductase Mll2211 TR:Q98IX0 (EMBL:AP002999) (371 aa) fasta scores: E(): 5.3e-102, 71.96% id in 371 aa
NP_880625.1	no significant database matches
NP_880626.1	predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein
NP_880627.1	Similar to Yersinia pestis HmsF protein TR:Q9R7V4 (EMBL:AL031866) (673 aa) fasta scores: E(): 1.3e-94, 40.2% id in 679 aa, and to Escherichia coli hypothetical lipoprotein YcdR precursor YcdR or B1023 SW:YCDR_ECOLI (P75906) (672 aa) fasta scores: E(): 3.3e-89, 39.38% id in 655 aa
NP_880628.1	Similar to Yersinia pestis HmsH TR:Q56939 (EMBL:U22837) (822 aa) fasta scores: E(): 1.5e-25, 24.39% id in 701 aa
NP_880629.1	no significant database matches
NP_880630.1	Similar to Rhizobium loti transcriptional regulator Mll4876 TR:Q98D38 (EMBL:AP003005) (153 aa) fasta scores: E(): 1.3e-15, 44.44% id in 135 aa, and to Pseudomonas aeruginosa probable transcriptional regulator Pa1603 TR:Q9I3B8 (EMBL:AE004588) (140 aa) fasta scores: E(): 3.1e-12, 37.03% id in 135 aa
NP_880631.1	transposase for IS481 element
NP_880632.1	Similar to Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC or Pa1074 SW:BRAC_PSEAE (P21175) (373 aa) fasta scores: E(): 3.9e-12, 24.37% id in 357 aa, and to Streptococcus pneumoniae branched-chain amino acid ABC transporter amino acid-binding protein Sp0749 TR:Q97RQ0 (EMBL:AE007382) (386 aa) fasta scores: E(): 9.5e-12, 24.3% id in 362 aa
NP_880633.1	Similar to Pseudomonas aeruginosa  membrane spanning protein OhbE TR:O87621 (EMBL:AF087482) (614 aa) fasta scores: E(): 1e-31, 31.4% id in 449 aa
NP_880634.1	Similar to Streptococcus pneumoniae branched-chain amino acid ABC transporter ATP-binding protein sp0752 TR:Q97RP7 (EMBL:AE007382) (254 aa) fasta scores: E(): 1.2e-30, 42.23% id in 251 aa, and to Rhizobium meliloti high-affinity branched-chain amino acid transport ATP-binding ABC transporter protein smc02357 TR:CAC47163 (EMBL:AL591791) (244 aa) fasta scores: E(): 3e-27, 40.98% id in 244 aa
NP_880635.1	Similar to Pseudomonas aeruginosa  substrate binding protein OhbG TR:O87623 (EMBL:AF087482) (239 aa) fasta scores: E(): 5.2e-31, 46.44% id in 239 aa, and to Rhizobium meliloti  ATP-binding ABC transporter protein Smc03119 TR:CAC47553 (EMBL:AL591792) (233 aa) fasta scores: E(): 9.8e-31, 43.69% id in 238 aa
NP_880636.1	Similar to Brevundimonas diminuta isoquinoline 1-oxidoreductase alpha subunit IorA SW:IORA_BREDI (Q51697) (152 aa) fasta scores: E(): 1.7e-22, 49.27% id in 138 aa, and to Pseudomonas aeruginosa probable oxidoreductase Pa1602 TR:Q9I3B9 (EMBL:AE004588) (163 aa) fasta scores: E(): 3e-38, 65.98% id in 147 aa
NP_880637.1	Similar to Streptomyces coelicolor  salicylate hydroxylase Sce29.14C TR:Q9Z4Y6 (EMBL:AL035707) (420 aa) fasta scores: E(): 2.3e-46, 40.42% id in 329 aa, and to Acinetobacter SpADP1. hypothetical 42.4 kDa protein TR:O24844 (EMBL:AF009672) (381 aa) fasta scores: E(): 1.2e-50, 38.19% id in 377 aa
NP_880638.1	Similar to Serratia marcescens maleate cis-trans isomerase MaiA TR:Q9KWI0 (EMBL:AB035810) (250 aa) fasta scores: E(): 8.2e-69, 79.67% id in 246 aa, and to Bacillus stearothermophilus maleate cis-trans isomerase MaiA TR:Q9WX57 (EMBL:AB015134) (251 aa) fasta scores: E(): 1.1e-56, 65.46% id in 249 aa. Identical to BP0579, 99.600% identity (99.600% ungapped) in 250 aa overlap.
NP_880639.1	Similar to Pyrococcus horikoshii hypothetical 38.8 kDa protein Ph1046 TR:O58751 (EMBL:AP000004) (350 aa) fasta scores: E(): 3.5e-09, 27% id in 274 aa, and to Pyrococcus horikoshii hypothetical 34.8 kDa protein Ph1048 TR:O58749 (EMBL:AP000004) (320 aa) fasta scores: E(): 1.5e-06, 25.42% id in 350 aa. Identical to BP0581, 100.000% identity (100.000% ungapped) in 343 aa overlap.
NP_880640.1	Similar to Arthrobacter sp N-carbamoylsarcosine amidase SW:CSH_ARTSP (P32400) (264 aa) fasta scores: E(): 2e-14, 32.67% id in 202 aa, and to Arthrobacter keyseri phthalate ester hydrolase pehA TR:Q9AGK9 (EMBL:AF331043) (218 aa) fasta scores: E(): 3.4e-19, 37.3% id in 193 aa. Identical to BP1958, 100.000% identity (100.000% ungapped) in 205 aa overlap.
NP_880641.1	Similar to Neisseria meningitidis invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter spSE19. pilin inverting protein ChnY TR:Q9F7E1 (EMBL:AF282240) (324 aa) fasta scores: E(): 8.2e-50, 47.516% id in 322 aa
NP_880642.1	Similar to Vibrio cholerae oxidoreductase,  Vca0151 TR:Q9KN15 (EMBL:AE004356) (450 aa) fasta scores: E(): 6.2e-50, 35.92% id in 451 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0545 TR:Q9I5Z1 (EMBL:AE004491) (434 aa) fasta scores: E(): 8e-43, 44.02% id in 452 aa
NP_880643.1	Similar to Pseudomonas aeruginosa hydroxamate-type ferrisiderophore receptor FiuA TR:O68595 (EMBL:AF051691) (802 aa) fasta scores: E(): 1.7e-71, 36.83% id in 714 aa, and to Salmonella typhimurium ferrichrome iron receptor FhuA TR:O86925 (EMBL:Y14025) (729 aa) fasta scores: E(): 2e-65, 35.72% id in 725 aa
NP_880644.1	Similar to Ralstonia spU2 NagM TR:Q9Z3X3 (EMBL:AF036940) (341 aa) fasta scores: E(): 1.1e-27, 32.39% id in 321 aa, and to Rhizobium meliloti hypothetical protein Sma1927 TR:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 7.3e-25, 30.06% id in 306 aa
NP_880645.1	Similar to Pseudomonas aeruginosa probable two-component response regulator Pa1980 TR:Q9I2C7 (EMBL:AE004624) (225 aa) fasta scores: E(): 2.7e-08, 31.19% id in 218 aa, and to Streptomyces coelicolor  two component response regulator sci5.09C TR:Q9X9Z1 (EMBL:AL079332) (210 aa) fasta scores: E(): 1.9e-07, 29.85% id in 211 aa
NP_880646.1	Similar to Bordetella bronchiseptica phosphoglucomutase Pgm TR:Q9S3V9 (EMBL:AF171632) (392 aa) fasta scores: E(): 4.2e-74, 50.89% id in 393 aa, and to Pseudomonas aeruginosa phosphomannomutase AlgC or Pa5322 SW:ALGC_PSEAE (P26276) (462 aa) fasta scores: E(): 5.6e-67, 43.57% id in 459 aa
NP_880647.1	Similar to Zymomonas mobilis glucose-6-phosphate isomerase Pgi SW:G6PI_ZYMMO (P28718) (507 aa) fasta scores: E(): 6.4e-34, 31.46% id in 464 aa, and to Xanthomonas campestris glucose-6-phosphate isomerase Pgi TR:O68824 (EMBL:AF054807) (562 aa) fasta scores: E(): 1.4e-32, 31.1% id in 524 aa. Also similar to BP3142, 40.891% identity (43.238% ungapped) in 516 aa overlap.
NP_880648.1	Similar to Synechococcus sp serine acetyltransferase, plasmid SrpH SW:SRPH_SYNP7 (Q59967) (319 aa) fasta scores: E(): 8.6e-57, 53.07% id in 309 aa, and to Trypanosoma cruzi serine acetyltransferase Sat TR:Q9BKB1 (EMBL:AF296848) (348 aa) fasta scores: E(): 1.1e-28, 48.93% id in 188 aa
NP_880649.1	Similar to Pseudomonas aeruginosa probable Mfs transporter Pa1286 TR:Q9I458 (EMBL:AE004558) (399 aa) fasta scores: E(): 2.4e-63, 49.5% id in 400 aa, and to Agrobacterium tumefaciens StrC58 Agr_c_1918p TR:AAK86848 (EMBL:AE008034) (414 aa) fasta scores: E(): 1.2e-55, 43.07% id in 390 aa. Also similar to BP1546, 42.569% identity (43.333% ungapped) in 397 aa overlap.
NP_880650.1	Modulates the activities of several enzymes which are inactive in their acetylated form
NP_880651.1	Similar to Escherichia coli extragenic suppressor protein SuhB or SsyA or B2533 SW:SUHB_ECOLI (P22783) (267 aa) fasta scores: E(): 3.5e-13, 32.43% id in 222 aa, and to Rhizobium loti monophosphatase-like protein Mlr0048 TR:Q98NP3 (EMBL:AP002994) (275 aa) fasta scores: E(): 1.1e-49, 48.7% id in 271 aa
NP_880652.1	Similar to Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD or B2661 SW:GABD_ECOLI (P25526) (482 aa) fasta scores: E(): 7e-125, 66.66% id in 480 aa, and to Alcaligenes eutrophus succinate semialdehyde dehydrogenase GabD TR:Q9RBF6 (EMBL:AF175740) (483 aa) fasta scores: E(): 2.8e-127, 66.87% id in 480 aa
NP_880653.1	Similar to Escherichia coli 4-aminobutyrate aminotransferase GoaG or B1302 SW:GOAG_ECOLI (P50457) (421 aa) fasta scores: E(): 2.8e-108, 68.09% id in 420 aa, and to Yersinia pestis  aminobutyrate aminotransferase GoaG TR:CAC92096 (EMBL:AJ414154) (429 aa) fasta scores: E(): 4.7e-105, 64.33% id in 429 aa
NP_880654.1	Similar to Streptomyces coelicolor hypothetical 32.4 kDa protein Sc9b5.25 TR:Q9ZBF5 (EMBL:AL035206) (292 aa) fasta scores: E(): 6.1e-30, 39.04% id in 292 aa, and to Bacillus halodurans Bh3455 protein Bh3455 TR:Q9K7B1 (EMBL:AP001518) (282 aa) fasta scores: E(): 1.3e-15, 32.41% id in 290 aa
NP_880655.1	Similar to Escherichia coli DNA helicase II UvrD or MutU or PdeB or Rad or RecL or B3813 SW:UVRD_ECOLI (P03018) (720 aa) fasta scores: E(): 2.1e-28, 32.46% id in 687 aa, and to Ralstonia solanacearum probable ATP-dependent DNA helicase II protein rsp1276 TR:CAD18427 (EMBL:AL646083) (710 aa) fasta scores: E(): 1.2e-168, 63.84% id in 697 aa
NP_880656.1	Similar to Escherichia coli YeaA protein YeaA TR:Q9F541 (EMBL:AP002527) (171 aa) fasta scores: E(): 3.3e-12, 35.58% id in 163 aa, and to Escherichia coli protein ParB SW:PAB4_ECOLI (P22997) (281 aa) fasta scores: E(): 1.2e-09, 31.22% id in 221 aa
NP_880657.1	no significant database matches
NP_880658.1	Similar to Bacillus subtilis oligopeptide transport system permease AppB SW:APPB_BACSU (P42062) (317 aa) fasta scores: E(): 6.3e-22, 28.52% id in 333 aa, and to Streptococcus pneumoniae R6 ABC transporter membrane-spanning permease-oligopeptide transport AppB TR:AAK99996 (EMBL:AE008491) (331 aa) fasta scores: E(): 1.5e-21, 28.31% id in 332 aa
NP_880659.1	Similar to Streptomyces coelicolor oligopeptide transport integral membrane protein Sc2a11.10 TR:O86571 (EMBL:AL031184) (335 aa) fasta scores: E(): 5.7e-22, 32.79% id in 247 aa, and to Deinococcus radiodurans peptide ABC transporter permease Dr0958 TR:Q9RVR4 (EMBL:AE001948) (332 aa) fasta scores: E(): 3.3e-18, 31.68% id in 243 aa
NP_880660.1	Similar to Agrobacterium tumefaciens MoaD TR:O50270 (EMBL:AF242881) (588 aa) fasta scores: E(): 2.2e-81, 48.35% id in 548 aa, and to Rhizobium meliloti  peptide transport ATP-binding ABC transporter protein smc04288 TR:CAC46528 (EMBL:AL591789) (593 aa) fasta scores: E(): 3.3e-86, 48.91% id in 554 aa
NP_880661.1	Similar to Streptomyces coelicolor hypothetical 19.0 kDa protein Sc10b7.04 TR:Q9X957 (EMBL:Y13833) (174 aa) fasta scores: E(): 1.5e-07, 37.24% id in 145 aa, and to Bacillus subtilis YcgE protein YcgE TR:O31472 (EMBL:Z99105) (155 aa) fasta scores: E(): 1.8e-07, 32.85% id in 140 aa
NP_880662.1	Similar to Serratia marcescens hemolysin activator protein precursor ShlB SW:HLYB_SERMA (P15321) (557 aa) fasta scores: E(): 0.016, 23.73% id in 535 aa, and to Pseudomonas aeruginosa hypothetical protein PA4624 TR:Q9HVG7 (EMBL:AE004876) (568 aa) fasta scores: E(): 7.2e-25, 25.75% id in 567 aa
NP_880663.1	N-terminus is similar to the N-terminal region of similar to Pseudomonas aeruginosa hypothetical protein PaA1727 TR:Q9I310 (EMBL:AE004599) (685 aa) fasta scores: E(): 1.5e-17, 38.62% id in 189 aa. Similar to N-terminal region of Pseudomonas carboxydovorans hypothetical protein CoxC TR:Q9KX27 (EMBL:X82447) (402 aa) fasta scores: E(): 6.7e-16, 33.33% id in 264 aa
NP_880664.1	Similar to Caulobacter crescentus pilus subunit protein CC2948 TR:Q9L720 (EMBL:AF229646) (59 aa) fasta scores: E(): 4.6e-05, 54% id in 50 aa, and to Rhizobium meliloti probable pSymA plasmid PilA2 pilus assembly protein TR:AAK65511 (EMBL:AE007272) (56 aa) fasta scores: E(): 0.00024, 50% id in 54 aa
NP_880665.1	Similar to Bacillus halodurans late competence protein required for processing and translocation BH3035 TR:Q9K8H1 (EMBL:AP001517) (162 aa) fasta scores: E(): 0.0035, 26.41% id in 159 aa, and to the C-terminal region of Aeromonas hydrophila type 4 prepilin-like proteins leader peptide processing enzyme [includes: leader peptidase; N-methyltransferase] TapD SW:LEP4_AERHY (P45794) (290 aa) fasta scores: E(): 0.45, 27.84% id in 176 aa
NP_880666.1	Poor database matches. Similar to the C-terminal region of Pseudomonas aeruginosa hypothetical protein PA4294 TR:Q9HWA6 (EMBL:AE004845) (168 aa) fasta scores: E(): 0.0027, 32.16% id in 143 aa
NP_880667.1	Similar to Pseudomonas aeruginosa hypothetical protein PA5409 TR:Q9HTF5 (EMBL:AE004953) (186 aa) fasta scores: E(): 2.5, 29.8% id in 151 aa. N-terminus is similar to N-terminal region of Rhizobium meliloti hypothetical protein SMA1572 TR:AAK65512 (EMBL:AE007272) (141 aa) fasta scores: E(): 0.029, 38.82% id in 85 aa
NP_880668.1	N-terminus is similar to the N-terminal region of Pseudomonas aeruginosa hypothetical protein PA4305 TR:Q9HW95 (EMBL:AE004846) (303 aa) fasta scores: E(): 3.9e-14, 36.36% id in 242 aa, and Rhizobium meliloti pilus assembly signal peptide protein TR:CAC41527 (EMBL:AL591782) (269 aa) fasta scores: E(): 0.0098, 33.2% id in 250 aa
NP_880669.1	Similar to Pseudomonas aeruginosa probable type II secretion system protein PA4304 TR:Q9HW96 (EMBL:AE004846) (416 aa) fasta scores: E(): 1e-32, 39.73% id in 453 aa. C-terminus is similar to the C-terminal region of Aeromonas salmonicida general secretion pathway protein D precursor ExeD SW:GSPD_AERSA (P45778) (678 aa) fasta scores: E(): 6.1e-12, 26.47% id in 374 aa
NP_880670.1	Similar to Ralstonia solanacearum probable pilus assembly protein Cpae2 or Rsp1086 or Rs02593 SWALL:Q8XQY2 (EMBL:AL646082) (439 aa) fasta scores: E(): 9.8e-23, 34.31% id in 440 aa
NP_880671.1	Similar to Pseudomonas aeruginosa hypothetical protein PA4301 TR:Q9HW99 (EMBL:AE004846) (294 aa) fasta scores: E(): 4e-19, 33.01% id in 309 aa, and to Rhizobium loti hypothetical protein MLR6484 TR:Q989C6 (EMBL:AP003009) (323 aa) fasta scores: E(): 1.8e-08, 26.79% id in 306 aa
NP_880672.1	Similar to N-terminal approx. 250 aa of Pseudomonas aeruginosa hypothetical protein PA4299 TR:Q9HWA1 (EMBL:AE004846) (245 aa) fasta scores: E(): 9.8e-12, 34.363% id in 259 aa
NP_880673.1	Similar, except at C-terminus, to Pseudomonas aeruginosa hypothetical protein PA4297 TR:Q9HWA3 (EMBL:AE004846) (556 aa) fasta scores: E(): 2.8e-12, 28.798% id in 441 aa, Rhizobium meliloti hypothetical protein SMC00158 TR:CAC46429 (EMBL:AL591788) (577 aa) fasta scores: E(): 1e-07, 25.175% id in 572 aa and to Agrobacterium tumefaciens hypothetical protein AGR_C_2962 TR:AAK87388 (EMBL:AE008083) (546 aa) fasta scores: E(): 4.1e-06, 23.833% id in 407 aa
NP_880674.1	Similar, except at N-terminus, to Pseudomonas aeruginosa type 4 fimbriae expression regulatory protein PilR, pilR or PA4547 SW:PILR_PSEAE (Q00934) (445 aa) fasta scores: E(): 2e-35, 40.123% id in 324 aa. Similar to many other bacterial response regulators
NP_880675.1	Unknown function
NP_880676.1	Similar to Rhizobium loti hypothetical protein MLL3449 TR:Q98G81 (EMBL:AP003002) (99 aa) fasta scores: E(): 4.7e-06, 42.268% id in 97 aa, Caulobacter crescentus hypothetical protein CC0827 TR:Q9A9Y4 (EMBL:AE005759) (145 aa) fasta scores: E(): 1.2e-05, 41.549% id in 142 aa and to Agrobacterium tumefaciens hypothetical protein AGR_l_2637 TR:AAK89886 (EMBL:AE008331) (142 aa) fasta scores: E(): 4.5e-05, 42.466% id in 146 aa
NP_880677.1	member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
NP_880678.1	Contains a region with similarity to bacterial hypothetical proteins e.g. Deinococcus radiodurans hypothetical protein DRA0258 TR:Q9RYQ1 (EMBL:AE001863) (288 aa) fasta scores: E(): 0.0007, 30.726% id in 179 aa
NP_880679.1	Similar to many cytochromes C e.g. Rhodopseudomonas viridis cytochrome c2 precursor CycA, cycA SW:CY2_RHOVI (P00083) (127 aa) fasta scores: E(): 1.8e-14, 45.045% id in 111 aa
NP_880680.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
NP_880681.1	Similar to Pseudomonas aeruginosa hypothetical protein PA2852 TR:Q9HZZ1 (EMBL:AE004711) (376 aa) fasta scores: E(): 1.6e-53, 47.013% id in 385 aa and to Neisseria meningitidis hypothetical protein NMA1132 TR:Q9JUU3 (EMBL:AL162755) (382 aa) fasta scores: E(): 3e-37, 37.105% id in 380 aa
NP_880682.1	Similar to Leishmania major hypothetical protein LM12.86 TR:Q9N746 (EMBL:AL390114) (163 aa) fasta scores: E(): 9.1e-20, 43.949% id in 157 aa and to Leishmania major hypothetical protein LM12.84 TR:Q9GY60 (EMBL:AL390114) (153 aa) fasta scores: E(): 5.2e-10, 48.718% id in 78 aa
NP_880683.1	Similar to bacterial hypothetical proteins e.g. Pseudomonas aeruginosa hypothetical protein PA2839 TR:Q9I004 (EMBL:AE004710) (256 aa) fasta scores: E(): 2.2e-43, 49.612% id in 258 aa. Also similar to parts of some eukaryotic proteins e.g. Arabidopsis thaliana hypothetical protein AT4G15090 TR:O23363 (EMBL:Z97337) (1705 aa) fasta scores: E(): 2.5e-32, 40.417% id in 240 aa and Neurospora crassa conserved hypothetical protein B2J23.80 TR:Q9HFJ4 (EMBL:AL442164) (379 aa) fasta scores: E(): 7.7e-21, 37.607% id in 234 aa
NP_880684.1	catalyzes the conversion of citrate to isocitrate
NP_880685.1	Similar to Pseudomonas aeruginosa hypothetical protein PA2230 TR:Q9I1N9 (EMBL:AE004649) (223 aa) fasta scores: E(): 2e-68, 78.351% id in 194 aa and to Rhizobium meliloti  transmembrane protein SMC01561 TR:CAC46891 (EMBL:AL591790) (189 aa) fasta scores: E(): 2e-28, 41.053% id in 190 aa
NP_880686.1	Similar to Yersinia enterocolitica ferrichrome receptor FcuA, fcuA SW:FCUA_YEREN (Q05202) (758 aa) fasta scores: E(): 5.1e-99, 40.909% id in 726 aa and to Bordetella bronchiseptica  ferric siderophore receptor BrfB, bfrB TR:P94265 (EMBL:U77671) (734 aa) fasta scores: E(): 0, 98.638% id in 734 aa. Show to be iron-regulated in Bordetella bronchiseptica
NP_880687.1	Show weak similarity to Pseudomonas sp. 2-haloalkanoic acid dehalogenase I SW:HAD1_PSESP (P24069) (227 aa) fasta scores: E(): 2.4e-09, 28.821% id in 229 aa. Also similar to many haloacid-type hydrolases e.g. Pseudomonas aeruginosa probable haloacid dehalogenase PA0810 TR:Q9I5C9 (EMBL:AE004516) (233 aa) fasta scores: E(): 1.7e-35, 42.797% id in 236 aa
NP_880688.1	transposase for IS481 element
NP_880689.1	Similar in part to Rhizobium meliloti hypothetical transmembrane protein SMC00354 TR:CAC41711 (EMBL:AL591783) (221 aa) fasta scores: E(): 2.1e-09, 33.908% id in 174 aa and to other  outer membrane proteins. Also similar to part of Escherichia coli outer membrane protein A OmpA, ompA SW:OMPA_ECOLI (P02934) (346 aa) fasta scores: E(): 2.4e-07, 40.860% id in 93 aa. May be truncated by the downstream insertion element
NP_880690.1	no significant database hits
NP_880691.1	catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate
NP_880692.1	Similar to the N-terminal half of Bacillus subtilis DNA polymerase III PolC-type polC or dnaF or mutI SW:DPO3_BACSU (P13267) (1437 aa) fasta scores: E(): 3.7e-07, 33.918% id in 171 aa and to many other exonucleases e.g. Deinococcus radiodurans  DNA polymerase III, epsilon subunit DR0856 TR:Q9RW13 (EMBL:AE001939) (197 aa) fasta scores: E(): 4.2e-14, 37.949% id in 195 aa
NP_880693.1	Similar to Mus musculus RS21-C6 TDRG-Tl1 TR:Q9QY93 (EMBL:AF110764) (170 aa) fasta scores: E(): 1.6e-15, 51.456% id in 103 aa and to other bacterial hypothetical proteins e.g. Pseudomonas aeruginosa hypothetical protein PA4789 TR:Q9HV19 (EMBL:AE004892) (101 aa) fasta scores: E(): 1.9e-09, 45.055% id in 91 aa
NP_880694.1	Similar to bacterial hypothetical proteins e.g. Bacillus subtilis hypothetical protein YczJ yczJ SW:YCZJ_BACSU (O31484) (95 aa) fasta scores: E(): 2.5e-09, 33.684% id in 95 aa and Deinococcus radiodurans conserved hypothetical protein DR1636 TR:Q9RTW6 (EMBL:AE002007) (122 aa) fasta scores: E(): 1e-08, 38.889% id in 90 aa
NP_880695.1	unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity
NP_880696.1	Similar to bacterial  integral membrane proteins e.g. Caulobacter crescentus integral membrane protein CC3090 TR:Q9A3W1 (EMBL:AE005972) (300 aa) fasta scores: E(): 1.3e-58, 57.388% id in 291 aa and Pseudomonas aeruginosa hypothetical protein PA4779 TR:Q9HV29 (EMBL:AE004891) (297 aa) fasta scores: E(): 1.6e-36, 45.890% id in 292 aa
NP_880697.1	Shows weak similarity to many bacterial  integral membrane proteins e.g. Escherichia coli O157:H7 hypothetical membrane protein ECS4801 TR:BAB38224 (EMBL:AP002567) (291 aa) fasta scores: E(): 4.4e-09, 28.235% id in 255 aa
NP_880698.1	Unknown function
NP_880699.1	transposase for IS481 element
NP_880700.1	Similar to e.g. Escherichia coli cyn operon transcriptional activator CynR, cynR SW:CYNR_ECOLI (P27111) (311 aa) fasta scores: E(): 5.7e-19, 29.085% id in 306 aa and to Vibrio cholerae transcriptional regulator, lysR family VC2103 TR:Q9KQ97 (EMBL:AE004284) (292 aa) fasta scores: E(): 1.7e-38, 39.161% id in 286 aa
NP_880701.1	Similar to many e.g. Pseudomonas aeruginosa coenzyme A transferase PsecoA, psecoA TR:O84911 (EMBL:AF010184) (497 aa) fasta scores: E(): 1.9e-121, 66.397% id in 494 aa
NP_880702.1	Similar to many e.g. Citrobacter diversus transcriptional activator protein AmpR ampR SW:AMPR_CITDI (P52658) (285 aa) fasta scores: E(): 1.3e-21, 33.904% id in 292 aa
NP_880704.1	Similar to many e.g. Rhizobium meliloti conserved hypothetical protein SMC00656 TR:CAC47295 (EMBL:AL591791) (93 aa) fasta scores: E(): 2.9e-08, 34.831% id in 89 aa, Pseudomonas aeruginosa hypothetical protein PA1749 TR:Q9I2Y8 (EMBL:AE004601) (161 aa) fasta scores: E(): 2.7e-07, 43.529% id in 85 aa and Streptomyces coelicolor conserved hypothetical protein SC8D11.19 TR:Q9AK00 (EMBL:AL512944) (102 aa) fasta scores: E(): 2e-06, 38.750% id in 80 aa
NP_880705.1	Similar to Streptomyces coelicolor probable hydroxyacyl-CoA dehydrogenase SCBAC20F6.15 TR:Q53926 (EMBL:X62373) (307 aa) fasta scores: E(): 1.3e-37, 41.613% id in 310 aa and to many other  hydroxyacyl-CoA dehydrogenases e.g. Pseudomonas aeruginosa probable 3-hydroxyacyl-CoA dehydrogenase PA5386 TR:Q9HTH8 (EMBL:AE004951) (321 aa) fasta scores: E(): 9e-48, 47.097% id in 310 aa
NP_880706.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
NP_880707.1	Unknown function
NP_880708.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
NP_880709.1	required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA
NP_880710.1	Unknown function
NP_880711.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
NP_880712.1	Similar to many  transport proteins e.g. Escherichia coli O157:H7  transport protein ECS3543 TR:BAB36966 (EMBL:AP002562) (394 aa) fasta scores: E(): 2.3e-76, 58.115% id in 382 aa
NP_880713.1	Similar to e.g. Erwinia chrysanthemi regulatory protein PecS, pecS SW:PECS_ERWCH (P42195) (166 aa) fasta scores: E(): 3e-17, 38.816% id in 152 aa and Streptomyces coelicolor  MarR-family regulatory protein SC8E4A.17 TR:Q9L1Y8 (EMBL:AL138662) (172 aa) fasta scores: E(): 2.6e-25, 49.045% id in 157 aa
NP_880714.2	Histone H1 homologue, DNA-binding protein Bph2, bph2 TR:P94344 (EMBL:U82555) (145 aa) fasta scores: E(): 2.2e-44, 100.000% id in 145 aa
NP_880715.1	transposase for IS481 element
NP_880716.1	Similar to e.g. Pseudomonas aeruginosa probable sulfate transporter PA0029 TR:Q9I7A1 (EMBL:AE004442) (517 aa) fasta scores: E(): 4e-48, 38.815% id in 523 aa and Stylosanthes hamata high affinity sulphate transporter 2 st2 SW:SUT2_STYHA (P53392) (662 aa) fasta scores: E(): 1.3e-33, 26.165% id in 558 aa
NP_880717.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif
NP_880718.1	required for 70S ribosome assembly
NP_880719.1	Similar to many e.g. Pseudomonas aeruginosa probable MFS transporter PA3573 TR:Q9HY47 (EMBL:AE004778) (392 aa) fasta scores: E(): 2.1e-54, 45.455% id in 396 aa; and Escherichia coli bicyclomycin resistance protein, bcr or b2182 SW:BCR_ECOLI (P28246) (396 aa) fasta scores: E():2.3e-39, 35.476% id in 389 aa
NP_880720.1	transposase for IS481 element
NP_880721.1	Similar to many e.g. Escherichia coli glycine betaine-binding periplasmic protein, proX or proU or b2679 SW:PROX_ECOLI (P14177) (330 aa) fasta scores: E(): 4e-08, 24.096% id in 332 aa. Also similar to BP3572, 53.012% identity (53.659% ungapped) in 332 aa overlap.
NP_880722.1	Similar to many e.g. Escherichia coli glycine betaine/L-proline transport system permease, proW or b2678 SW:PROW_ECOLI (P14176) (354 aa) fasta scores: E(): 1.4e-42, 47.566% id in 267 aa
NP_880723.1	Similar to many e.g. Lactococcus lactis BusaA busaA TR:Q9RQ06 (EMBL:AF139575) (407 aa) fasta scores: E(): 1.8e-58, 47.783% id in 406 aa and to Salmonella typhimurium glycine betaine/L-proline transport ATP-binding protein ProV proV SW:PROV_SALTY (P17328) (400 aa) fasta scores: E(): 6.2e-58, 46.770% id in 387 aa
NP_880724.1	Shows weak similarity over the N-terminal 60 residues to tautomerases e.g. Pseudomonas putida 4-oxalocrotonate tautomerase xylH SW:XYLH_PSEPU (Q01468) (62 aa) fasta scores: E(): 0.017, 33.333% id in 60 aa. Shows full-length similarity to  tautomerases e.g. Pseudomonas pavonaceae  tautomerase TR:Q9EV83 (EMBL:AJ290446) (130 aa) fasta scores: E(): 0.0049, 35.484% id in 124 aa and to hypothetical proteins
NP_880725.1	catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA
NP_880726.1	Similar to many hypothetical proteins e.g. Neisseria meningitidis  transferase NMA1087 or NMB0869 TR:Q9JQL8 (EMBL:AL162755) (263 aa) fasta scores: E(): 1.5e-19, 32.432% id in 259 aa and Pseudomonas aeruginosa hypothetical protein PA2842 TR:Q9I001 (EMBL:AE004711) (249 aa) fasta scores: E(): 1.3e-06, 25.909% id in 220 aa
NP_880727.1	Similar to many  transcriptional regulators e.g. Rhizobium meliloti  transcriptional regulator SMB20773 TR:CAC49865 (EMBL:AL603647) (228 aa) fasta scores: E(): 6.7e-17, 38.350% id in 206 aa and Acinetobacter calcoaceticus  transcriptional repressor MdcY mdcY TR:Q9F0Q8 (EMBL:AF209728) (224 aa) fasta scores: E(): 3.9e-15, 33.498% id in 203 aa
NP_880728.1	Similar to e.g. Rhizobium leguminosarum malonyl-CoA decarboxylase matA TR:Q9ZIP6 (EMBL:AF117694) (462 aa) fasta scores: E(): 4.7e-36, 46.012% id in 326 aa and Homo sapiens malonyl-CoA decarboxylase, mitochondrial precursor mlycD SW:DCMC_HUMAN (O95822) (493 aa) fasta scores: E(): 2.3e-28, 35.714% id in 434 aa
NP_880729.1	Similar to many enoyl-CoA hydratase family proteins e.g. Streptomyces coelicolor  enoyl CoA hydratase SC5f2A.31C TR:Q9X7Q4 (EMBL:AL049587) (257 aa) fasta scores: E(): 6.3e-22, 37.121% id in 264 aa. Not similar enough to experimentally characterised proteins to suggest function
NP_880730.1	Similar to many bacterial hypothetical proteins e.g Rhizobium meliloti conserved hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 9.6e-47, 43.396% id in 318 aa
NP_880731.1	Similar to many e.g. Salmonella typhimurium superoxide dismutase [Cu-Zn] precursor sodC SW:SODC_SALTY (P53636) (177 aa) fasta scores: E(): 2.2e-31, 55.294% id in 170 aa
NP_880732.1	Similar to many hypothetical proteins e.g. Pseudomonas aeruginosa hypothetical protein PA3836 TR:Q9HXG8 (EMBL:AE004801) (325 aa) fasta scores: E(): 1.9e-83, 76.543% id in 324 aa
NP_880733.1	Similar to many ABC-transporter ATP-binding components e.g. Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa3838 TR:Q9HXG6 (EMBL:AE004801) (264 aa) fasta scores: E(): 2.1e-76, 88.258% id in 264 aa
NP_880734.1	Similar to Azotobacter vinelandii molybdenum transport protein ModA SW:MODA_AZOVI (P37733) (270 aa) fasta scores: E(): 3e-33, 46.341% id in 246 aa and Rhodobacter capsulatus molybdenum-pterin binding protein MopA SW:MOPA_RHOCA (Q08385) (265 aa) fasta scores: E(): 7.6e-27, 42.308% id in 260 aa
NP_880735.1	Similar to Pseudomonas aeruginosa hypothetical protein PA4793 TR:Q9HV15 (EMBL:AE004892) (187 aa) fasta scores: E(): 4.2e-06, 27.374% id in 179 aa
NP_880736.1	Similar to hypothetical proteins e.g. Rhizobium loti hypothetical protein MLR2398 TR:Q98IH7 (EMBL:AP002999) (390 aa) fasta scores: E(): 7.7e-67, 52.660% id in 376 aa
NP_880737.1	Similar to the C-termini of two-component response regulators e.g. Rhodobacter sphaeroides DmsR dmsR TR:O32479 (EMBL:D89075) (232 aa) fasta scores: E(): 1.9e-05, 36.842% id in 114 aa. Possibly a pseudogene
NP_880738.1	Similar to e.g. Escherichia coli acriflavine resistance protein E precursor acrE or envC or b3265 SW:ACRE_ECOLI (P24180) (385 aa) fasta scores: E(): 1.4e-43, 47.684% id in 367 aa and Neisseria gonorrhoeae membrane fusion protein MtrC precursor mtrC SW:MTRC_NEIGO (P43505) (412 aa) fasta scores: E(): 2.5e-37, 41.304% id in 414 aa. Probably attached to inner membrane
NP_880739.1	Similar to e.g. Escherichia coli acriflavine resistance protein B acrB or acrE or b0462 SW:ACRB_ECOLI (P31224) (1049 aa) fasta scores: E(): 3.1e-201, 52.073% id in 1037 aa and Neisseria gonorrhoeae rnd protein MtrD mtrD TR:Q51073 (EMBL:U60099) (1067 aa) fasta scores: E(): 3e-174, 51.873% id in 1068 aa
NP_880740.1	involved in the de novo synthesis of pyridoxine (Vitamin B6)
NP_880741.1	Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids
NP_880742.1	hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides
NP_880743.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
NP_880744.1	Similar to many e.g. Escherichia coli CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase pgsA or b1912 SW:PGSA_ECOLI (P06978) (181 aa) fasta scores: E(): 7.1e-27, 50.276% id in 181 aa
NP_880745.1	catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis
NP_880746.1	Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates
NP_880747.1	Unknown function. C-terminus has been interrupted by an insertion element
NP_880748.1	transposase for IS481 element
NP_880749.1	Similar to many  ABC transporter permeases e.g. Streptomyces coelicolor  branched amino acid transport system permease SC8A11.11 TR:Q9FBZ9 (EMBL:AL391041) (290 aa) fasta scores: E(): 2.5e-39, 46.735% id in 291 aa. Also similar to Salmonella typhimurium high-affinity branched-chain amino acid transport system permease LivH livH or livA SW:LIVH_SALTY (P30295) (308 aa) fasta scores: E(): 3.2e-17, 32.566% id in 304 aa
NP_880750.1	Similar to many ABC-transporter substrate-binding proteins e.g. Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor braC or PA1074 SW:BRAC_PSEAE (P21175) (373 aa) fasta scores: E(): 2.2e-09, 25.360% id in 347 aa
NP_880751.1	Similar to many dioxygenase components e.g. Pseudomonas putida large subunit of terminal dioxygenase tdnA1 TR:P95531 (EMBL:D85415) (448 aa) fasta scores: E(): 9.9e-42, 34.954% id in 432 aa, and Pseudomonas putida toluate 1,2-dioxygenase alpha subunit xylX SW:XYLX_PSEPU (P23099) (454 aa) fasta scores: E(): 1.1e-32, 31.720% id in 372 aa
NP_880752.1	Similar to many e.g. Pseudomonas putida p-cumate dioxygenase small subunit cmtAc TR:Q51975 (EMBL:U24215) (180 aa) fasta scores: E(): 3.1e-10, 27.647% id in 170 aa and Pseudomonas putida toluate 1,2-dioxygenase beta subunit xylY SW:XYLY_PSEPU (P23100) (162 aa) fasta scores: E(): 1.7e-05, 33.696% id in 92 aa
NP_880753.1	Similar to many e.g. Streptomyces collinus 2-cyclohexenylcarbonyl CoA isomerase chcB TR:Q9L4S8 (EMBL:AF268489) (269 aa) fasta scores: E(): 9e-18, 34.100% id in 261 aa and Rhodopseudomonas palustris cyclohex-1-ene-1-carboxyl-CoA hydratase badK TR:O07453 (EMBL:U75363) (258 aa) fasta scores: E(): 1.5e-17, 34.340% id in 265 aa
NP_880754.1	Similar to many e.g. Zoogloea ramigera acetoacetyl-CoA reductase phbB SW:PHBB_ZOORA (P23238) (241 aa) fasta scores: E(): 1.7e-24, 41.494% id in 241 aa and to Vibrio cholerae 3-oxoacyl-[acyl-carrier protein] reductase fabG or VC2021 SW:FABG_VIBCH (Q9KQH7) (244 aa) fasta scores: E(): 2.4e-23, 41.176% id in 238 aa
NP_880755.1	Similar to many e.g. Caulobacter crescentus ferredoxin, 2fe-2s fdxB or fdxP or CC3524 SW:FER2_CAUCR (P37098) (106 aa) fasta scores: E(): 1.6e-17, 50.495% id in 101 aa
NP_880756.1	Similar to many e.g. Rattus norvegicus alpha-methylacyl-CoA racemase AMACR SW:AMAC_RAT (P70473) (381 aa) fasta scores: E(): 8.3e-53, 44.416% id in 385 aa and Streptomyces coelicolor  racemase SC5F2A.13 TR:Q9X7N6 (EMBL:AL049587) (398 aa) fasta scores: E(): 9.4e-68, 51.697% id in 383 aa
NP_880757.1	Similar to e.g. Streptomyces hygroscopicus acetyl-hydrolase bah SW:BAH_STRHY (Q01109) (299 aa) fasta scores: E(): 1.2e-24, 39.912% id in 228 aa and to Bordetella pertussis hypothetical protein TR:O30449 (EMBL:AF006000) (324 aa) fasta scores: E(): 4.6e-27, 39.502% id in 281 aa
NP_880758.1	Similar to Azoarcus evansii aerobic phenylacetate-CoA ligase paaK or pacD TR:Q9L9C1 (EMBL:AF176259) (440 aa) fasta scores: E(): 2.1e-39, 33.710% id in 442 aa and Escherichia coli phenylacetate-CoA ligase paaK or b1398 SW:PAAK_ECOLI (P76085) (437 aa) fasta scores: E(): 1.3e-35, 31.735% id in 438 aa
NP_880759.1	Similar to many  thiolases e.g. Caulobacter crescentus thiolase family protein CC1432 TR:Q9A8C2 (EMBL:AE005818) (400 aa) fasta scores: E(): 1.5e-111, 67.929% id in 396 aa
NP_880760.1	Similar to Caulobacter crescentus hypothetical protein CC1431 TR:Q9A8C3 (EMBL:AE005818) (488 aa) fasta scores: E(): 3e-65, 44.136% id in 469 aa
NP_880761.1	Similar to many e.g. Salmonella typhimurium OsmT protein osmT TR:CAC44465 (EMBL:AJ313506) (308 aa) fasta scores: E(): 1.1e-13, 28.777% id in 278 aa
NP_880762.1	Similar to many hypothetical proteins e.g. Rhizobium meliloti conserved hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 2.4e-41, 40.694% id in 317 aa
NP_880763.1	transposase for IS481 element
NP_880764.1	transposase for IS481 element
NP_880765.1	Similar to hypothetical proteins e.g. Pseudomonas aeruginosa hypothetical protein PA3338 TR:Q9HYQ7 (EMBL:AE004756) (96 aa) fasta scores: E(): 3.1e-25, 70.213% id in 94 aa and Rhizobium loti hypothetical protein Mll3944 TR:Q98F45 (EMBL:AP003003) (115 aa) fasta scores: E(): 3.6e-23, 72.414% id in 87 aa
NP_880766.1	Similar to hypothetical proteins e.g. Caulobacter crescentus hypothetical protein CC3056 TR:Q9A3Z4 (EMBL:AE005969) (137 aa) fasta scores: E(): 6.6e-14, 43.590% id in 117 aa
NP_880767.1	Similar to hypothetical proteins e.g. Pseudomonas aeruginosa hypothetical protein PA2662 TR:Q9I0H6 (EMBL:AE004695) (397 aa) fasta scores: E(): 7.8e-34, 39.747% id in 395 aa
NP_880768.1	Similar to hypothetical proteins e.g. Neisseria meningitidis hypothetical protein NMB0013 TR:Q9K1Q7 (EMBL:AE002359) (149 aa) fasta scores: E(): 2.4e-16, 44.444% id in 144 aa and Helicobacter pylori J99 hypothetical protein JHP1395 TR:Q9ZJB8 (EMBL:AE001561) (145 aa) fasta scores: E(): 9.7e-09, 33.333% id in 144 aa
NP_880769.1	Similar to many e.g. Escherichia coli exodeoxyribonuclease III xthA or b1749 SW:EX3_ECOLI (P09030) (268 aa) fasta scores: E(): 1.2e-18, 36.842% id in 266 aa and Neisseria meningitidis  exodeoxyribonuclease III NMA2086 TR:Q9JSY0 (EMBL:AL162758) (256 aa) fasta scores: E(): 2.4e-47, 50.382% id in 262 aa. It should be noted that at least one protein in this family, Pseudomonas aeruginosa crc or PA5332, TR:Q51380 (EMBL:U38241), appears to have no exonuclease activity and is unable to complement DNA-repair deficient E. coli
NP_880770.1	Similar to many hypothetical proteins from Rhizobium spp. e.g. Rhizobium loti hypothetical protein MLR6294 TR:Q989S9 (EMBL:AP003008) (525 aa) fasta scores: E(): 2.4e-71, 44.177% id in 498 aa
NP_880772.1	Similar to many hydrolases e.g. Rhodococcus opacus 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase pcaL TR:O67982 (EMBL:AF003947) (400 aa) fasta scores: E(): 1.3e-10, 29.04% id in 272 aa
NP_880773.1	Similar to hypothetical proteins e.g. Helicobacter pylori J99 hypothetical protein JHP0295 TR:Q9ZMC6 (EMBL:AE001466) (293 aa) fasta scores: E(): 2.6e-24, 36.8% id in 288 aa and Yersinia pseudotuberculosis hypothetical protein TR:Q9X9F8 (EMBL:AJ236887) (293 aa) fasta scores: E(): 8.9e-20, 37.5% id in 288 aa
NP_880774.1	Similar to hypothetical proteins e.g. Rhizobium meliloti conserved hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.1e-40, 38.26% id in 311 aa and Bordetella pertussis hypothetical kDa protein SW:YBR5_BORPE (O30446) (323 aa) fasta scores: E(): 2e-28, 32.82% id in 326 aa
NP_880775.1	Similar to Pseudomonas aeruginosa hypothetical protein PA0490 TR:Q9I628 (EMBL:AE004486) (97 aa) fasta scores: E(): 1.6e-12, 50.53% id in 93 aa
NP_880776.1	catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense
NP_880777.1	Similar to Neisseria meningitidis invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter spSE19. pilin inverting protein ChnY TR:Q9F7E1 (EMBL:AF282240) (324 aa) fasta scores: E(): 8.2e-50, 47.516% id in 322 aa
NP_880778.1	Similar to hypothetical proteins e.g. Rhizobium meliloti hypothetical protein SMB20006 TR:CAC48409 (EMBL:AL603642) (317 aa) fasta scores: E(): 5.3e-55, 52.34% id in 298 aa
NP_880779.1	Similar to many  transcriptional regulators e.g. Rhizobium meliloti  gstR-like transcriptional regulator protein TR:CAC48407 (EMBL:AL603642) (301 aa) fasta scores: E(): 4e-44, 43.47% id in 299 aa
NP_880780.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa1969 TR:Q9I2D5 (EMBL:AE004623) (130 aa) fasta scores: E()=4.5e-06, 38.18% id in 110 aa.
NP_880781.1	Similar to e.g. Brevundimonas diminuta isoquinoline 1-oxidoreductase alpha subunit iorA SW:IORA_BREDI (Q51697) (152 aa) fasta scores: E(): 1.3e-27, 50.98% id in 153 aa and Pseudomonas aeruginosa probable oxidoreductase PA1881 TR:Q9I2L6 (EMBL:AE004614) (153 aa) fasta scores: E(): 6.1e-37, 65.13% id in 152 aa
NP_880782.1	Similar to e.g. Brevundimonas diminuta isoquinoline 1-oxidoreductase beta subunit iorB SW:IORB_BREDI (Q51698) (781 aa) fasta scores: E(): 4e-16, 34.58% id in 775 aa and Rhizobium meliloti  aldehyde dehydrogenase SMB20342 TR:CAC48728 (EMBL:AL603643) (737 aa) fasta scores: E(): 1.4e-92, 50% id in 746 aa
NP_880783.1	Similar to many e.g. Pseudomonas aeruginosa hypothetical protein PA4618 TR:Q9HVH3 (EMBL:AE004876) (323 aa) fasta scores: E(): 2.4e-34, 37.72% id in 326 aa. Also similar to BP0576, 50.893% identity (53.271% ungapped) in 336 aa overlap.
NP_880784.1	Similar to many  transcriptional regulators e.g. Pseudomonas aeruginosa probable transcriptional regulator PA2047 TR:Q9I268 (EMBL:AE004631) (329 aa) fasta scores: E(): 7.8e-55, 55.47% id in 292 aa
NP_880785.1	Similar to Xanthomonas axonopodis hypothetical protein Xac2490 SWALL:AAM37341 (EMBL:AE011886) (294 aa) fasta scores: E(): 1.3e-28, 54.26% id in 293 aa, and to Xanthomonas campestris hypothetical protein Xcc2358 SWALL:AAM41636 (EMBL:AE012344) (364 aa) fasta scores: E(): 7.3e-28, 52.74% id in 292 aa
NP_880786.1	Similar to hypothetical proteins e.g. Pseudomonas aeruginosa hypothetical protein PA4012 TR:Q9HX15 (EMBL:AE004818) (197 aa) fasta scores: E(): 5.1e-10, 32.97% id in 188 aa
NP_880787.1	Similar to hypothetical proteins e.g. Pseudomonas aeruginosa hypothetical protein PA1353 TR:Q9I3Z1 (EMBL:AE004565) (137 aa) fasta scores: E(): 6.3e-21, 47.69% id in 130 aa
NP_880788.1	Similar to many e.g. Streptomyces lavendulae mitomycin C translocase mct TR:Q9WVV3 (EMBL:AF127374) (484 aa) fasta scores: E(): 8.6e-53, 41.7% id in 470 aa and Streptomyces lipmanii puromycin resistance protein Pur8 SW:PUR8_STRLP (P42670) (503 aa) fasta scores: E(): 7.2e-49, 40.51% id in 464 aa
NP_880789.1	Similar to hypothetical proteins e.g. Agrobacterium tumefaciens hypothetical protein TR:AAK88141 (EMBL:AE008154) (118 aa) fasta scores: E(): 2.1e-19, 42.98% id in 114 aa and Arabidopsis thaliana hypothetical protein F2K13_90 TR:Q9LFK7 (EMBL:AL391141) (135 aa) fasta scores: E(): 8.5e-11, 33.04% id in 115 aa
NP_880790.1	transposase for IS481 element
NP_880791.1	transposase for IS481 element
NP_880792.1	Similar to ABC-transporter ATP-binding components e.g. Vibrio cholerae  toxin secretion transporter VC1446 TR:Q9KS15 (EMBL:AE004223) (721 aa) fasta scores: E(): 3.2e-44, 32.58% id in 577 aa
NP_880793.1	Unknown function
NP_880794.1	Similar to e.g. Pseudomonas aeruginosa hypothetical protein PA4467 TR:Q9HVV1 (EMBL:AE004860) (310 aa) fasta scores: E(): 6.6e-31, 48.42% id in 254 aa and Myxococcus xanthus GufA protein gufA SW:GUFA_MYXXA (Q06916) (254 aa) fasta scores: E(): 9.6e-28, 43.65% id in 252 aa. Also similar to BP0194, 47.458% identity (47.782% ungapped) in 295 aa overlap.
NP_880795.1	Unknown function
NP_880796.1	Similar to many e.g. Rhizobium meliloti transcription regulator protein SMC02425 TR:CAC47179 (EMBL:AL591791) (225 aa) fasta scores: E(): 9.6e-26, 36.6% id in 224 aa
NP_880797.1	Similar to many e.g. Vibrio cholerae sulfate permease family protein VCA0077 TR:Q9KN88 (EMBL:AE004350) (553 aa) fasta scores: E(): 1.8e-139, 68.14% id in 540 aa
NP_880798.1	Similar to Agrobacterium tumefaciens hypothetical protein AGR_C_3685P TR:AAK87787 (EMBL:AE008120) (182 aa) fasta scores: E(): 2e-21, 37.83% id in 185 aa and Rhizobium meliloti hypothetical protein SMA0191 TR:AAK64759 (EMBL:AE007204) (176 aa) fasta scores: E(): 1.3e-19, 42.19% id in 173 aa
NP_880799.1	Similar to many e.g. Agrobacterium tumefaciens hypothetical protein AGR_C_3686P TR:AAK87788 (EMBL:AE008120) (142 aa) fasta scores: E(): 1.1e-21, 51.66% id in 120 aa. Also similar to BP3466, 43.137% identity (43.137% ungapped) in 102 aa overlap.
NP_880800.1	Similar, except at the N-terminus, to Deinococcus radiodurans hydrolase-related protein DR1403 TR:Q9RUI3 (EMBL:AE001985) (277 aa) fasta scores: E(): 3.7e-37, 45.57% id in 237 aa
NP_880801.1	Similar to e.g. Neisseria meningitidis hypothetical protein NMB0783 TR:Q9K039 (EMBL:AE002432) (159 aa) fasta scores: E(): 5.5e-15, 44.65% id in 159 aa and Haemophilus ducreyi hypothetical protein TR:Q9L7U8 (EMBL:AF219260) (149 aa) fasta scores: E(): 4.2e-11, 39.66% id in 121 aa
NP_880802.1	Similar to Rhizobium loti hypothetical protein MSR0042 TR:Q98NP7 (EMBL:AP002994) (62 aa) fasta scores: E(): 1.2e-11, 67.79% id in 59 aa
NP_880803.1	Similar to many e.g. Agrobacterium tumefaciens AGR_PAT_562P TR:AAK90764 (EMBL:AE007908) (340 aa) fasta scores: E(): 7e-25, 32.45% id in 265 aa
NP_880804.1	Similar to e.g. Rhizobium meliloti conserved hypothetical protein SMC01560 TR:CAC46890 (EMBL:AL591790) (117 aa) fasta scores: E(): 8.1e-22, 52.17% id in 115 aa and Escherichia coli hypothetical protein ybaA or b0456 SW:YBAA_ECOLI (P09161) (117 aa) fasta scores: E(): 4.3e-18, 46.95% id in 115 aa
NP_880805.1	Similar to e.g. Streptomyces coelicolor oxidoreductase SCF55.14 TR:Q9RJQ0 (EMBL:AL132991) (289 aa) fasta scores: E(): 1.4e-35, 46.12% id in 284 aa and Pseudomonas chlororaphis phenazine biosynthesis protein PhzF phzF or phzC SW:PHZF_PSECL (Q51520) (278 aa) fasta scores: E(): 1.4e-12, 31.78% id in 280 aa
NP_880806.1	Similar to many e.g. Burkholderia cepacia 2,2-dialkylglycine decarboxylase repressor protein dgdR SW:DGDR_BURCE (P16931) (293 aa) fasta scores: E(): 4e-24, 32.62% id in 282 aa
NP_880807.1	Similar to e.g. Xylella fastidiosa hypothetical protein Xf1278 TR:Q9PDV1 (EMBL:AE003961) (451 aa) fasta scores: E(): 9.3e-87, 56.77% id in 421 aa and Escherichia coli hypothetical protein YjiN yjiN or b4336 SW:YJIN_ECOLI (P39385) (426 aa) fasta scores: E(): 1.1e-42, 36.69% id in 417 aa
NP_880808.1	Similar to Bacillus subtilis hypothetical 20.5 kDa protein ywqN TR:P96726 (EMBL:Z92952) (181 aa) fasta scores: E(): 5e-08, 27.07% id in 181 aa, and to Clostridium acetobutylicum multimeric flavodoxin wrba family protein cac3334 TR:Q97DY6 (EMBL:AE007830) (178 aa) fasta scores: E(): 6.8e-07, 29.78% id in 188 aa
NP_880809.1	Similar to Alcaligenes eutrophus acetaldehyde dehydrogenase II AcoD SW:DHA2_ALCEU (P46368) (506 aa) fasta scores: E(): 1.1e-155, 74.65% id in 509 aa
NP_880810.1	Similar to Yersinia pseudotuberculosis transcriptional regulator TR:Q9AGD7 (EMBL:AF335466) (614 aa) fasta scores: E(): 1.1e-60, 39.49% id in 628 aa, and to Alcaligenes eutrophus acetoin catabolism regulatory protein acoR SW:ACOR_ALCEU (P28614) (668 aa) fasta scores: E(): 1e-36, 37.26% id in 628 aa
NP_880811.1	Similar to Clostridium acetobutylicum predicted membrane protein yohj family cac0612 TR:Q97LE9 (EMBL:AE007576) (117 aa) fasta scores: E(): 3.4e-06, 32.99% id in 97 aa
NP_880812.1	N-terminal region similar to many eg.Escherichia coli biotin synthesis protein BioC or b0777 SW:BIOC_ECOLI (P12999) (251 aa) fasta scores: E(): 3.4e-13, 33.98% id in 256 aa. C-terminal region similar to many eg. Bacillus subtilis dethiobiotin synthetase bioD SW:BIOD_BACSU (P53558) (231 aa) fasta scores: E(): 1.4e-09, 34.59% id in 211 aa
NP_880813.1	Weakly similar to predicted hydrolases eg. Streptomyces coelicolor  hydrolase SCE87.22C TR:Q9RKB6 (EMBL:AL132674) (314 aa) fasta scores: E(): 0.017, 30.62% id in 258 aa, and to Streptomyces peucetius 10-carbomethoxy-13-deoxycarminomycin esterase DnrP TR:Q54809 (EMBL:L40425) (298 aa) fasta scores: E(): 2.8, 31.25% id in 112 aa
NP_880814.1	Similar to biotin synthesis enzymes eg. Kurthia sp538-KA26. KapA synthase-II BioFII TR:Q9AJM7 (EMBL:AB045875) (398 aa) fasta scores: E(): 2.6e-49, 41.73% id in 381 aa, and to Bacillus subtilis 8-amino-7-oxononanoate synthase BioF SW:BIOF_BACSU (P53556) (389 aa) fasta scores: E(): 7.3e-44, 38.24% id in 387 aa
NP_880815.1	catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate
NP_880816.1	transposase for IS481 element
NP_880817.1	Similar to Vibrio cholerae cation transport ATPase, E1-E2 family VC1437 TR:Q9KS24 (EMBL:AE004222) (790 aa) fasta scores: E(): 5.4e-11, 29.43% id in 316 aa, and to Pseudomonas aeruginosa probable cation-transporting p-type ATPase PA1549 TR:Q9I3G8 (EMBL:AE004583) (811 aa) fasta scores: E(): 9.6e-11, 39.24% id in 158 aa
NP_880818.1	Similar to Neisseria meningitidis (serogroup A), and  inner membrane protein NMA1716 or NMB1516 TR:Q9JR08 (EMBL:AL162756) (62 aa) fasta scores: E(): 0.0012, 36.17% id in 47 aa, and to Caulobacter crescentus cytochrome oxidase maturation protein, cbb3-type cc1408 TR:Q9A8E6 (EMBL:AE005815) (55 aa) fasta scores: E(): 0.68, 36.95% id in 46 aa
NP_880819.1	CcoO; FixO
NP_880820.1	Similar to Vibrio cholerae cytochrome C oxidase, subunit CcoQ VC1440 TR:Q9KS21 (EMBL:AE004222) (54 aa) fasta scores: E(): 0.25, 34.78% id in 46 aa
NP_880821.1	Similar to Neisseria meningitidis cytochrome C oxidase, subunit III NMB1723 TR:Q9JY60 (EMBL:AE002522) (365 aa) fasta scores: E(): 1.3e-51, 44.82% id in 319 aa
NP_880822.1	Similar to many predicted ferredoxins eg. Neisseria meningitidis  ferredoxin NMA1668 TR:Q9JTR2 (EMBL:AL162756) (498 aa) fasta scores: E(): 2.7e-76, 44.93% id in 494 aa
NP_880823.1	similar to Ralstonia solanacearum probable lipoprotein SWALL:Q8XZW4 (EMBL:AL646063) Rsc1281 or Rs02794; length 76 aa; id=54.34%; ungapped id=56.81%; E()=3.4e-05; 46 aa overlap; query 1-45 aa; subject 24-68 aa
NP_880826.1	Similar to Rhizobium meliloti conserved hypothetical protein SMC00230 TR:CAC46234 (EMBL:AL591788) (165 aa) fasta scores: E(): 3.6e-31, 56.09% id in 164 aa, and to Pseudomonas aeruginosa hypothetical protein PA0711 TR:Q9I5L7 (EMBL:AE004506) (168 aa) fasta scores: E(): 7.7e-27, 52.46% id in 162 aa
NP_880827.1	Similar to many eg. Caulobacter crescentus ABC transporter ATP-binding protein CC3373 TR:Q9A333 (EMBL:AE005998) (314 aa) fasta scores: E(): 4.8e-77, 77.12% id in 306 aa
NP_880828.1	Similar to Caulobacter crescentus ABC-2 type transporter  cc3372 TR:Q9A334 (EMBL:AE005998) (253 aa) fasta scores: E(): 1.6e-69, 75.79% id in 252 aa
NP_880829.1	Similar to many eg. Rhizobium meliloti conserved hypothetical protein sma0665 TR:AAK65009 (EMBL:AE007226) (413 aa) fasta scores: E(): 9.9e-38, 38.28% id in 350 aa, and to Escherichia coli hypothetical protein ydik or b1688 SW:YDIK_ECOLI (P77175) (370 aa) fasta scores: E(): 9.4e-27, 28.85% id in 350 aa
NP_880830.1	transposase for IS481 element
NP_880831.1	Lies in region of unusual DNA content. Weakly similar to Xylella fastidiosa hypothetical protein Xf2507 TR:Q9PAK8 (EMBL:AE004058) (110 aa) fasta scores: E(): 1.3e-05, 31.57% id in 95 aa
NP_880832.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria
NP_880833.1	Similar to Escherichia coli DNA primase DnaG or DnaP or ParB or b3066 or z4419 or ecs3949 SW:PRIM_ECOLI (P02923) (581 aa) fasta scores: E(): 2.7e-63, 46.18% id in 446 aa, and to Neisseria meningitidis DNA primase dnag or nma1736 SW:PRIM_NEIMA (P57028) (590 aa) fasta scores: E(): 7.4e-76, 46.45% id in 508 aa
NP_880834.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
NP_880835.1	Similar to Archaeoglobus fulgidus xanthine-guanine phosphoribosyltransferase AF0239 TR:O30000 (EMBL:AE001089) (194 aa) fasta scores: E(): 1e-09, 31.81% id in 154 aa
NP_880836.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
NP_880837.1	May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
NP_880838.1	Similar to predicted proteases eg. Pseudomonas aeruginosa protease subunit HflC or PA4941 TR:Q9HUM3 (EMBL:AE004907) (289 aa) fasta scores: E(): 7.3e-37, 40.13% id in 289 aa
NP_880839.1	Similar to Pseudomonas aeruginosa protease subunit HflK or PA4942 TR:Q9HUM2 (EMBL:AE004907) (400 aa) fasta scores: E(): 3.1e-34, 42.5% id in 400 aa, and to Escherichia coli and HflK protein or HflA or b4174 or z5781 or ecs5150 SW:HFLK_ECOLI (P25662) (419 aa) fasta scores: E(): 3e-31, 39.04% id in 420 aa
NP_880840.1	Similar to Escherichia coli GTP-binding protein HflX or b4173 SW:HFLX_ECOLI (P25519) (426 aa) fasta scores: E(): 1e-60, 56.62% id in 332 aa
NP_880841.1	Stimulates the elongation of poly(A) tails
NP_880842.1	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis
NP_880843.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
NP_880844.1	Similar to Pseudomonas aeruginosa hypothetical protein PA3800 TR:Q9HXJ7 (EMBL:AE004798) (380 aa) fasta scores: E(): 5e-36, 33.33% id in 375 aa, and to Vibrio cholerae hypothetical protein VC0762 TR:Q9KTW8 (EMBL:AE004161) (386 aa) fasta scores: E(): 3.8e-33, 30.31% id in 376 aa. Contains six PQQ enzyme repeats.
NP_880845.1	Similar to Neisseria meningitidis  membrane protein NMA1064 TR:Q9JV00 (EMBL:AL162755) (209 aa) fasta scores: E(): 4.8e-16, 35.07% id in 211 aa
NP_880846.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
NP_880847.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
NP_880849.1	Similar to Rhizobium loti Mlr4359 protein TR:Q98E86 (EMBL:AP003004) (410 aa) fasta scores: E(): 2.2e-56, 44.96% id in 387 aa, and to Neisseria meningitidis hypothetical protein NMB1308 TR:Q9JZ42 (EMBL:AE002479) (364 aa) fasta scores: E(): 1.5e-54, 63.88% id in 360 aa
NP_880850.1	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate
NP_880851.1	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain
NP_880852.1	Similar to Caulobacter crescentus  outer membrane protein Cc0351 precursor SW:Y351_CAUCR (Q9AB80) (254 aa) fasta scores: E(): 5.8e-12, 29.38% id in 245 aa, and to Escherichia coli mlta-interacting protein precursor MipA or b1782 SW:MIPA_ECOLI (P77486) (248 aa) fasta scores: E(): 3e-07, 27.64% id in 246 aa
NP_880853.1	Similar to Escherichia coli probable sensor protein YgiY or b3026 SW:YGIY_ECOLI (P40719) (449 aa) fasta scores: E(): 4.2e-34, 32.82% id in 460 aa
NP_880854.1	transposase for IS481 element
NP_880855.1	catalyzes the oxidative deamination of D-amino acids
NP_880856.1	Similar to Escherichia coli, hypothetical protein YjeB or b4178 or z5785 or ecs5154 SW:YJEB_ECOLI (P21498) (141 aa) fasta scores: E(): 3.1e-18, 44.61% id in 130 aa
NP_880857.1	flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine
NP_880858.1	Similar to Vibrio cholerae hypothetical protein Vc0519 TR:Q9KUK0 (EMBL:AE004138) (147 aa) fasta scores: E(): 2.4e-18, 51.04% id in 143 aa, and to Neisseria meningitidis hypothetical protein NMB1951 TR:Q9JXP0 (EMBL:AE002543) (180 aa) fasta scores: E(): 9.2e-18, 47.02% id in 168 aa
NP_880859.1	transposase for IS481 element
NP_880860.1	Similar to Halomonas elongata L-2,4-diaminobutyric acid acetyltransferase ectA SW:ECA2_HALEL (O52249) (192 aa) fasta scores: E(): 2.7e-25, 43.82% id in 178 aa, and to Bacillus pasteurii EctA TR:Q9AP35 (EMBL:AF316874) (180 aa) fasta scores: E(): 1.1e-11, 34.17% id in 158 aa
NP_880861.1	Similar to Vibrio cholerae transcriptional regulator, MarR family vc1278 TR:Q9KSH8 (EMBL:AE004207) (159 aa) fasta scores: E(): 3.1e-11, 36.02% id in 136 aa
NP_880862.1	Similar to Rhizobium meliloti  transcriptional regulator protein smb20276 TR:CAC48666 (EMBL:AL603642) (296 aa) fasta scores: E(): 6.8e-19, 34.53% id in 304 aa
NP_880863.1	Similar to Rhizobium meliloti probable aminotransferase smb20277 TR:CAC48667 (EMBL:AL603642) (447 aa) fasta scores: E(): 2.6e-118, 69.14% id in 444 aa, and to Bacillus sphaericus adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA SW:BIOA_BACSH (P22805) (455 aa) fasta scores: E(): 5.2e-46, 34% id in 447 aa
NP_880864.1	Similar to Rhizobium meliloti hypothetical immunogenic protein smb20292 TR:CAC48682 (EMBL:AL603642) (327 aa) fasta scores: E(): 8e-93, 73.62% id in 326 aa, and to Brucella abortus 31 kDa immunogenic protein precursor BcsP31 SW:BCSP_BRUAB (P12920) (329 aa) fasta scores: E(): 3e-35, 36.69% id in 327 aa
NP_880865.1	Similar to Rhizobium meliloti hypothetical 88.3 kDa protein smb20291 TR:CAC48681 (EMBL:AL603642) (827 aa) fasta scores: E(): 1.1e-160, 54.67% id in 834 aa
NP_880866.1	transposase for IS481 element
NP_880867.1	No significant database matches. May be disrupted by downsteam IS481
NP_880868.1	Previously sequenced as Bordetella pertussis BapA protein BapA TR:Q9F4B4 (EMBL:AJ277632) (903 aa) fasta scores: E(): 0, 100% id in 903 aa
NP_880869.1	Similar to Rhizobium meliloti  cardiolipin synthetase transmembrane protein TR:CAC46099 (EMBL:AL591787) (487 aa) fasta scores: E(): 6.5e-100, 54% id in 487 aa, and to Bacillus firmus cardiolipin synthetase Cls SW:CLS_BACFI (O66043) (503 aa) fasta scores: E(): 2e-36, 28.21% id in 475 aa
NP_880870.1	Similar to Bacillus subtilis anti-sigma F factor antagonist spoIIAa SW:SP21_BACSU (P10727) (116 aa) fasta scores: E(): 1.1e-06, 30.84% id in 107 aa
NP_880871.1	Similar to Chlamydia muridarum RsbW protein, tc0837 TR:Q9PJJ2 (EMBL:AE002350) (152 aa) fasta scores: E(): 6.3e-05, 28.57% id in 126 aa, and to Bacillus subtilis anti-sigma b factor RsbW SW:RSBW_BACSU (P17904) (160 aa) fasta scores: E(): 0.16, 23.88% id in 134 aa
NP_880872.1	Similar to Klebsiella aerogenes alanine racemase, catabolic DadB SW:ALR2_KLEAE (O30746) (356 aa) fasta scores: E(): 4.1e-40, 39.45% id in 365 aa, and to Escherichia coli alanine racemase, biosynthetic Alr or b4053 SW:ALR1_ECOLI (P29743) (359 aa) fasta scores: E(): 1.5e-34, 36.01% id in 361 aa. Also similar to BP1221, 41.398% identity (42.659% ungapped) in 372 aa overlap.
NP_880873.1	Similar to Pseudomonas aeruginosa probable MFS transporter pa4096 TR:Q9HWT2 (EMBL:AE004826) (419 aa) fasta scores: E(): 1.1e-10, 28.57% id in 406 aa, and to Streptomyces coelicolor  integral membrane transport protein SCI30a.30c TR:Q9S243 (EMBL:AL096811) (463 aa) fasta scores: E(): 1.6e-09, 27.27% id in 396 aa
NP_880874.1	Similar to Chlamydia trachomatis sigma regulatory family protein-pp2c phosphatase rbsu or ct588 TR:O84592 (EMBL:AE001329) (650 aa) fasta scores: E(): 5e-19, 27.88% id in 373 aa, and to Bacillus subtilis sigma factor sigb regulation protein RsbU rsbU SW:RSBU_BACSU (P40399) (335 aa) fasta scores: E(): 1.1e-13, 26.51% id in 264 aa
NP_880878.1	Similar to Erwinia amylovora  RNA polymerase sigma factor HrpL SWALL:Q46616 (EMBL:U36244) (182 aa) fasta scores: E(): 5.7e-14, 37.41% id in 155 aa, and to Escherichia coli RNA polymerase sigma-E factor RpoE or SigE or B2573 or Z3855 or Ecs3439 SWALL:RPOE_ECOLI (SWALL:P34086) (191 aa) fasta scores: E(): 7.9e-14, 36.09% id in 169 aa
NP_880879.1	Similar to Pseudomonas aeruginosa type II secretion protein PscC or Pa1716 SWALL:Q9I319 (EMBL:AE004598) (600 aa) fasta scores: E(): 1.6e-28, 36.15% id in 531 aa, and to Yersinia enterocolitica YscC SWALL:AAK69235 (EMBL:AF336309) (607 aa) fasta scores: E(): 4e-19, 36.21% id in 533 aa
NP_880881.1	Similar to many eg. Pseudomonas aeruginosa translocation protein in type III secretion PscU or Pa1690 TR:Q9I337 (EMBL:AE004596) (349 aa) fasta scores: E(): 1.3e-46, 41.88% id in 339 aa, and to Yersinia enterocolitica YscU TR:Q56844 (EMBL:AF102990) (354 aa) fasta scores: E(): 4.7e-45, 38.96% id in 349 aa
NP_880882.1	Similar to Pseudomonas aeruginosa translocation protein in type III secretion PscT or pa1691 TR:Q9I336 (EMBL:AE004596) (262 aa) fasta scores: E(): 3.1e-29, 38.84% id in 242 aa, and to Yersinia pestis Yop proteins translocation protein TR:AAC62558 (EMBL:AF074612) (261 aa) fasta scores: E(): 4.8e-29, 35.45% id in 251 aa
NP_880883.1	Similar to Bordetella bronchiseptica BscS TR:Q9L9D8 (EMBL:AF172245) (88 aa) fasta scores: E(): 3.9e-30, 97.72% id in 88 aa, and to Yersinia pestis Yop translocation protein S SW:YSCS_YERPE (P40298) (79 aa) fasta scores: E(): 3e-13, 56.57% id in 76 aa
NP_880884.1	part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response
NP_880885.1	Similar to Bordetella bronchiseptica BscQ TR:Q9L9E0 (EMBL:AF172245) (123 aa) fasta scores: E(): 3.4e-34, 98.9% id in 91 aa, and to Yersinia pestis Yop translocation protein Q SW:YSCQ_YERPE (P42713) (307 aa) fasta scores: E(): 7e-07, 46.37% id in 69 aa
NP_880887.1	Similar to many eg. Bordetella bronchiseptica BscO TR:O68540 (EMBL:AF049488) (143 aa) fasta scores: E(): 3.3e-46, 97.88% id in 142 aa, and to Pseudomonas aeruginosa translocation protein in type III secretion PscO or pa1696 TR:Q9I331 (EMBL:AE004596) (158 aa) fasta scores: E(): 4.5e-05, 30.61% id in 147 aa
NP_880888.1	Similar to many eg. Bordetella bronchiseptica BscN TR:O68539 (EMBL:AF049488) (444 aa) fasta scores: E(): 2.6e-162, 99.32% id in 444 aa, and to Pseudomonas aeruginosa ATP synthase in type III secretion system pa1697 TR:Q9I330 (EMBL:AE004596) (440 aa) fasta scores: E(): 1.8e-103, 68.19% id in 415 aa
NP_880889.1	Similar to many eg. Bordetella bronchiseptica BscL TR:O68538 (EMBL:AF049488) (212 aa) fasta scores: E(): 8e-72, 98.58% id in 212 aa, and to Pseudomonas aeruginosa type III export protein PscL or pa1725 TR:Q9I312 (EMBL:AE004598) (214 aa) fasta scores: E(): 2.6e-23, 42.56% id in 195 aa
NP_880890.1	Similar to Bordetella bronchiseptica BscK TR:O68537 (EMBL:AF049488) (220 aa) fasta scores: E(): 9.4e-87, 98.18% id in 220 aa
NP_880891.1	Similar to many eg. Bordetella bronchiseptica BscJ TR:O68536 (EMBL:AF049488) (274 aa) fasta scores: E(): 4.5e-97, 98.17% id in 274 aa, and to Erwinia amylovora harpin secretion HrcJ precursor TR:Q46620 (EMBL:U56662) (260 aa) fasta scores: E(): 2.7e-29, 44.89% id in 245 aa
NP_880892.1	Similar to Bordetella bronchiseptica BscI TR:O68535 (EMBL:AF049488) (115 aa) fasta scores: E(): 8.1e-32, 90.43% id in 115 aa, and to Pseudomonas aeruginosa type III export protein PscI or pa1722 TR:Q9I315 (EMBL:AE004598) (112 aa) fasta scores: E(): 2.1, 28.07% id in 114 aa
NP_880894.1	Weakly similar to many Pseudomonas aeruginosa regulatory protein PcrH or pa1707 TR:Q9I325 (EMBL:AE004597) (167 aa) fasta scores: E(): 0.0042, 25.34% id in 146 aa, and to Yersinia pestis low calcium response locus protein H Lcrh or ypcd1.30c or y0051 SW:LCRH_YERPE (P21207) (168 aa) fasta scores: E(): 0.063, 23.81% id in 126 aa
NP_880895.1	Similar to Bordetella bronchiseptica outer protein B BopB TR:Q9REZ5 (EMBL:AF207789) (400 aa) fasta scores: E(): 2e-118, 96.75% id in 400 aa
NP_880896.1	Similar to Bordetella bronchiseptica outer protein D BopD TR:Q9REZ6 (EMBL:AF207788) (313 aa) fasta scores: E(): 3.5e-86, 98.4% id in 313 aa
NP_880897.1	Similar to Pseudomonas aeruginosa regulatory protein PcrH or pa1707 TR:Q9I325 (EMBL:AE004597) (167 aa) fasta scores: E(): 1.4e-12, 37.41% id in 155 aa, and to Yersinia pestis low calcium response locus protein H LcrH or ypcd1.30c or y0051 SW:LCRH_YERPE (P21207) (168 aa) fasta scores: E(): 4.7e-08, 31.66% id in 120 aa
NP_880899.1	Strongly similar to Bordetella bronchiseptica secreted protein 22 Bsp22 TR:Q9REZ7 (EMBL:AF207787) (205 aa) fasta scores: E(): 4.1e-68, 96.58% id in 205 aa
NP_880900.1	Similar to many eg. Bordetella bronchiseptica outer protein N BopN TR:Q9REZ4 (EMBL:AF207790) (365 aa) fasta scores: E(): 4.3e-132, 99.17% id in 365 aa, and to Pseudomonas syringae hypersensitivity response secretion protein HrpJ SW:HRPJ_PSESY (Q05395) (346 aa) fasta scores: E(): 5e-08, 26.94% id in 308 aa
NP_880902.1	Similar to Pseudomonas aeruginosa pcr3 pcr3 or pa1701 TR:O30534 (EMBL:AF010150) (121 aa) fasta scores: E(): 0.52, 31.49% id in 127 aa
NP_880903.1	Similar to Bradyrhizobium japonicum Id192 TR:Q9ANI6 (EMBL:AF322012) (142 aa) fasta scores: E(): 0.99, 29.2% id in 113 aa, and to Chlamydia muridarum type III secretion chaperone,  tc0546 TR:Q9PKC0 (EMBL:AE002323) (139 aa) fasta scores: E(): 5.1, 31.13% id in 106 aa
NP_880904.1	Similar to many eg. Chlamydophila caviae Cds2 protein TR:O34019 (EMBL:U88070) (709 aa) fasta scores: E(): 6e-116, 47.14% id in 700 aa, and to Salmonella typhimurium Invasion protein InvA SW:INVA_SALTY (P35657) (665 aa) fasta scores: E(): 1.4e-90, 43.96% id in 671 aa. Also similar to BP1367, 36.510% identity (38.426% ungapped) in 682 aa overlap.
NP_880905.1	Weak but full length similarity to Pseudomonas aeruginosa type III secretion protein PscD TR:P95432 (EMBL:U56077) (432 aa) fasta scores: E(): 0.00018, 25.57% id in 438 aa
NP_880907.1	Similar to Pseudomonas aeruginosa  type III secretion protein PscF or pa1719 TR:P95434 (EMBL:U56077) (85 aa) fasta scores: E(): 0.013, 27.9% id in 86 aa
NP_880909.1	transposase for IS481 element
NP_880910.1	Similar to Escherichia coli transcription elongation factor GreA or b3181 SW:GREA_ECOLI (P21346) (158 aa) fasta scores: E(): 4.5e-32, 62.02% id in 158 aa. Also similar to BPBP1117, 40.789% identity (41.060% ungapped) in 152 aa overlap.
NP_880911.1	Similar to Escherichia coli methyl-accepting chemotaxis protein ii tar or chem or b1886 SW:MCP2_ECOLI (P07017) (553 aa) fasta scores: E(): 2.1e-60, 46.69% id in 484 aa
NP_880912.1	Similar to Escherichia coli  purine permease YcdG or b1006 SW:YCDG_ECOLI (P75892) (442 aa) fasta scores: E(): 4.5e-99, 66.58% id in 431 aa, and to Streptomyces coelicolor  uracyl permease SCl6.07 TR:Q9L109 (EMBL:AL159139) (478 aa) fasta scores: E(): 6.5e-52, 45.9% id in 440 aa
NP_880913.1	Similar to Salmonella typhimurium phosphoglycerate transport regulatory protein PgtC precursor pgtC SW:PGTC_SALTY (P37591) (397 aa) fasta scores: E(): 2.7e-23, 28.57% id in 392 aa
NP_880914.1	transposase for IS481 element
NP_880915.1	Similar to many eg. Rhizobium meliloti  iron uptake ABC transporter periplasmic solute-binding protein smb21540 TR:CAC49381 (EMBL:AL603645) (340 aa) fasta scores: E(): 6.1e-81, 61.28% id in 328 aa, and to Vibrio cholerae ABC transporter periplasmic substrate-binding protein vca0603 TR:Q9KLY8 (EMBL:AE004390) (339 aa) fasta scores: E(): 1.1e-62, 48.96% id in 337 aa
NP_880916.1	catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate
NP_880917.1	Similar to many eg. Rhizobium meliloti  iron uptake ABC transporter permease smb21542 TR:CAC49383 (EMBL:AL603645) (680 aa) fasta scores: E(): 2.1e-99, 56.09% id in 492 aa
NP_880918.1	Similar to Pseudomonas putida ABC transporter TR:Q9KHS9 (EMBL:AF249736) (282 aa) fasta scores: E(): 2.6e-60, 67.98% id in 278 aa, and to Vibrio cholerae ABC transporter ATP-binding protein vca0602 TR:Q9KLY9 (EMBL:AE004390) (403 aa) fasta scores: E(): 1.1e-46, 47.32% id in 355 aa
NP_880919.1	Similar to Pseudomonas putida response regulator TR:Q9KHT0 (EMBL:AF249736) (289 aa) fasta scores: E(): 6.2e-53, 51.91% id in 287 aa, and to Rhodospirillum rubrum rubisco operon transcriptional regulator cbbR SW:CBBR_RHORU (P52595) (298 aa) fasta scores: E(): 3e-20, 28.92% id in 287 aa
NP_880920.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa2804 TR:Q9I039 (EMBL:AE004707) (193 aa) fasta scores: E(): 8.3e-24, 45.66% id in 173 aa, and to Rhizobium loti Mll1439 protein TR:Q98KK1 (EMBL:AP002997) (194 aa) fasta scores: E(): 6.6e-20, 40.46% id in 173 aa
NP_880921.1	Similar to Pseudomonas aeruginosa probable 3-mercaptopyruvate sulfurtransferase SseA or pa1292 TR:Q9I452 (EMBL:AE004558) (284 aa) fasta scores: E(): 5.6e-46, 49.82% id in 281 aa, and to Rattus norvegicus 3-mercaptopyruvate sulfurtransferase MpsT SW:THTM_RAT (P97532) (296 aa) fasta scores: E(): 1.2e-22, 36.73% id in 245 aa
NP_880922.1	metalloprotease
NP_880923.1	Similar to Escherichia coli quinone oxidoreductase Qor or Hcz or b4051 SW:QOR_ECOLI (P28304) (327 aa) fasta scores: E(): 3.7e-67, 58.64% id in 324 aa, and to Pseudomonas aeruginosa quinone oxidoreductase Qor or pa0023 SW:QOR_PSEAE (P43903) (325 aa) fasta scores: E(): 8e-80, 66.25% id in 323 aa
NP_880924.1	Similar to Bacillus subtilis hypothetical 34.0 kDa protein in gltP-pcp intergenic region YcbK SW:YCBK_BACSU (P42243) (312 aa) fasta scores: E(): 7.1e-20, 28.84% id in 312 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3358 TR:Q9HYN8 (EMBL:AE004758) (292 aa) fasta scores: E(): 9.6e-10, 29.13% id in 302 aa
NP_880925.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3222 TR:Q9HZ18 (EMBL:AE004745) (299 aa) fasta scores: E(): 2e-56, 60.07% id in 278 aa, and to Pasteurella multocida hypothetical protein Pm0461 TR:Q9CNH0 (EMBL:AE006082) (286 aa) fasta scores: E(): 4e-44, 45.68% id in 278 aa
NP_880926.1	Similar to Burkholderia pseudomallei hypothetical 18.0 kDa protein TR:Q9ZF73 (EMBL:AF110185) (163 aa) fasta scores: E(): 3.6e-17, 46.26% id in 134 aa, and to Salmonella typhimurium multiple antibiotic resistance protein MarR or stm1520 SW:MARR_SALTY (Q56069) (144 aa) fasta scores: E(): 2.9e-10, 33.33% id in 129 aa
NP_880927.1	Similar to Pseudomonas aeruginosa multidrug resistance protein Pa5159 TR:Q9HU25 (EMBL:AE004928) (394 aa) fasta scores: E(): 5.6e-47, 52.03% id in 394 aa, and to Escherichia coli multidrug resistance protein A EmrA or b2685 SW:EMRA_ECOLI (P27303) (390 aa) fasta scores: E(): 9.6e-37, 46.21% id in 383 aa. May form pores for efflux of toxins.
NP_880928.1	Similar to Escherichia coli, and multidrug resistance protein A EmrB or b2686 or z3987 or ecs3548 SW:EMRB_ECOLI (P27304) (512 aa) fasta scores: E(): 9.4e-102, 54.72% id in 508 aa, and to Haemophilus influenzae multidrug resistance protein B homolog EmrB or hi0897 SW:EMRB_HAEIN (P44927) (510 aa) fasta scores: E(): 2.7e-98, 52.89% id in 501 aa
NP_880929.1	Similar to Pseudomonas putida tartrate dehydrogenase SW:TTUC_PSEPU (Q51945) (364 aa) fasta scores: E(): 2.7e-99, 67.77% id in 360 aa, and to Escherichia coli probable tartrate dehydrogenase YeaU or b1800 SW:TTUC_ECOLI (P76251) (361 aa) fasta scores: E(): 7.8e-104, 69.49% id in 354 aa
NP_880930.1	Similar to many eg. Rhizobium meliloti probable rhizopine catabolism regulatory protein MocR SW:MOCR_RHIME (P49309) (493 aa) fasta scores: E(): 1.4e-63, 41.43% id in 473 aa
NP_880931.1	Similar to Agrobacterium tumefaciens Agr_l_2786p TR:AAK89959 (EMBL:AE008339) (585 aa) fasta scores: E(): 8.4e-66, 37.86% id in 515 aa, and to Rhizobium loti ABC transporter oligopeptide-binding protein Mlr3395 TR:Q98GC1 (EMBL:AP003001) (536 aa) fasta scores: E(): 5.6e-55, 35.48% id in 527 aa. Also similar to BP0284, 59.693% identity (60.155% ungapped) in 521 aa overlap.
NP_880932.1	Similar to many eg. Rhizobium loti ABC transporter permease Mlr3397 TR:Q98GC0 (EMBL:AP003001) (328 aa) fasta scores: E(): 4.1e-47, 47.07% id in 325 aa
NP_880933.1	Similar to Rhizobium meliloti probable ABC transporter permease Sma2083 TR:AAK65795 (EMBL:AE007299) (332 aa) fasta scores: E(): 1.4e-52, 52.2% id in 272 aa
NP_880934.1	Similar to many eg. Agrobacterium tumefaciens Agr_l_3504p TR:AAK90329 (EMBL:AE008378) (575 aa) fasta scores: E(): 2.8e-114, 60.74% id in 535 aa, and to Rhizobium meliloti  oligopeptide ABC transporter ATP-binding protein Smb20111 TR:CAC48511 (EMBL:AL603642) (546 aa) fasta scores: E(): 1e-84, 48.53% id in 546 aa
NP_880935.1	transposase for IS481 element
NP_880936.1	Similar to many eg. Escherichia coli 4-aminobutyrate aminotransferase GabT or b2662 SW:GABT_ECOLI (P22256) (426 aa) fasta scores: E(): 1.3e-88, 56.97% id in 416 aa, and to Rhizobium meliloti 4-aminobutyrate aminotransferase TR:CAC49252 (EMBL:AL603645) (422 aa) fasta scores: E(): 2e-102, 66.18% id in 414 aa
NP_880937.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa0131 TR:Q9I701 (EMBL:AE004451) (95 aa) fasta scores: E(): 1.3e-20, 66.3% id in 92 aa, and to Rhizobium loti Mll5080 protein TR:Q98CN0 (EMBL:AP003005) (93 aa) fasta scores: E(): 2.1e-16, 55.05% id in 89 aa
NP_880938.1	Similar to Rhizobium loti acetylpolyamine aminohydrolase Mll0103 TR:Q98NK3 (EMBL:AP002994) (342 aa) fasta scores: E(): 5.8e-47, 46.88% id in 337 aa, and to Mycoplana ramosa acetylpolyamine aminohydrolase AphA or Aph SW:APHA_MYCRA (Q48935) (341 aa) fasta scores: E(): 1.1e-35, 37.65% id in 332 aa
NP_880939.1	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide
NP_880940.1	Similar to many eg. Pseudomonas aeruginosa hypothetical protein Pa0239 TR:Q9I6P9 (EMBL:AE004462) (292 aa) fasta scores: E(): 1.1e-23, 36.17% id in 293 aa
NP_880941.1	Similar to many eg. Pseudomonas aeruginosa probable aldehyde dehydrogenase Pa0219 TR:Q9I6R9 (EMBL:AE004460) (496 aa) fasta scores: E(): 1e-116, 60.97% id in 492 aa, and to Homo sapiens aldehyde dehydrogenase 1a2 AldH1a2 or raldh2 SW:DHA2_HUMAN (O94788) (499 aa) fasta scores: E(): 1.4e-78, 43.51% id in 478 aa
NP_880942.1	Similar to many eg. Escherichia coli  2-hydroxyacid dehydrogenase YcdW or b1033 SW:YCDW_ECOLI (P75913) (325 aa) fasta scores: E(): 2.5e-48, 45.72% id in 304 aa
NP_880943.1	Similar to many eg. Pseudomonas fluorescens family II aminotransferase TR:Q9FDI7 (EMBL:AF247644) (458 aa) fasta scores: E(): 1.5e-99, 58.64% id in 428 aa
NP_880944.1	Similar to many eg. Pseudomonas aeruginosa probable sodium:alanine symporter Pa2533 TR:Q9I0V1 (EMBL:AE004681) (449 aa) fasta scores: E(): 2.1e-125, 75.78% id in 446 aa
NP_880945.1	Similar to Escherichia coli hypothetical protein yjgr yjgr or b4263 SW:YJGR_ECOLI (P39342) (500 aa) fasta scores: E(): 9.7e-112, 63.24% id in 506 aa
NP_880946.1	Similar to many eg. Neisseria meningitidis hypothetical protein Nmb1648 TR:Q9JYC7 (EMBL:AE002515) (242 aa) fasta scores: E(): 6.6e-60, 67.22% id in 241 aa
NP_880947.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
NP_880948.1	catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis
NP_880949.1	Similar to Neisseria meningitidis probable nicotinate-nucleotide adenylyltransferase NadD or nmb2024 SW:NADD_NEIMB (P57090) (201 aa) fasta scores: E(): 6.3e-22, 39.69% id in 199 aa, and to Escherichia coli nicotinate-nucleotide adenylyltransferase NadD or b0639 SW:NADD_ECOLI (P52085) (213 aa) fasta scores: E(): 4.9e-12, 35.4% id in 209 aa
NP_880950.1	Similar to many eg. Neisseria meningitidis (serogroup A), and hypothetical protein Nma0417 TR:Q9JQR0 (EMBL:AL162753) (128 aa) fasta scores: E(): 6.8e-16, 48.14% id in 108 aa
NP_880951.1	SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA
NP_880952.1	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell
NP_880953.1	Previously sequenced as Bordetella pertussis Vag8 protein Vag8-2 SWALL:Q8VV95 (EMBL:AJ420993) (915 aa) fasta scores: E(): 0, 100% id in 915 aa
NP_880954.1	transposase for IS481 element
NP_880955.1	Similar to a family of proteins involved in processing of the 5'end of 16S rRNA and implicated in the formation of cytoplasmic axial filaments during chromosome segregation and cell division, eg. Neisseria meningitidis cytoplasmic axial filament protein nmb1791 TR:Q9JY14 (EMBL:AE002529) (509 aa) fasta scores: E(): 5.2e-111, 60.41% id in 485 aa, and to Escherichia coli, and ribonuclease G CafA or Rng or b3247 or z4605 or ecs4119 SW:RNG_ECOLI (P25537) (488 aa) fasta scores: E(): 6.6e-98, 52.24% id in 490 aa
NP_880956.1	Similar to Amycolatopsis methanolica prephenate dehydratase PheA or Pdt SW:PHEA_AMYME (Q44104) (304 aa) fasta scores: E(): 3.1e-19, 35.76% id in 274 aa, and to Neisseria gonorrhoeae P-protein PheA SW:PHEA_NEIGO (Q9ZHY3) (362 aa) fasta scores: E(): 3.8e-17, 30.07% id in 266 aa
NP_880957.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1283 TR:Q9I461 (EMBL:AE004558) (186 aa) fasta scores: E(): 2.1e-41, 60.94% id in 169 aa
NP_880958.1	Similar to many major facilitator family proteins eg. Pseudomonas aeruginosa probable MFS transporter pa1282 TR:Q9I462 (EMBL:AE004557) (501 aa) fasta scores: E(): 1.2e-90, 58.07% id in 489 aa, and to Salmonella typhimurium methyl viologen resistance protein SmvA SW:SMVA_SALTY (P37594) (496 aa) fasta scores: E(): 2.2e-53, 38.91% id in 496 aa
NP_880959.1	Similar to many ABC transporters eg. Neisseria meningitidis  ABC transporter ATP-binding protein nma0535 TR:Q9JW59 (EMBL:AL162753) (621 aa) fasta scores: E(): 2.3e-75, 40.39% id in 604 aa, and to Escherichia coli, and probable transport ATP-binding protein MsbA or b0914 or z1260 or ecs0997 SW:MSBA_ECOLI (P27299) (582 aa) fasta scores: E(): 1.3e-71, 37.87% id in 573 aa. Includes both ATP-binding and integral membrane subunits.
NP_880960.1	Previously sequenced as Bordetella pertussis heptosyltransferase II WaaF TR:O07076 (EMBL:Y13475) (321 aa) fasta scores: E(): 2.3e-125, 100% id in 321 aa, and to Escherichia coli ADP-heptose--LPS heptosyltransferase II RfaF or WaaF or b3620 SW:RFAF_ECOLI (P37692) (348 aa) fasta scores: E(): 3.2e-08, 29.58% id in 311 aa
NP_880961.1	Previously sequenced as Bordetella pertussis hypothetical 19.1 kDa protein TR:O07077 (EMBL:Y13475) (179 aa) fasta scores: E(): 2.6e-63, 100% id in 179 aa, and similar to many eg. Myxococcus xanthus hypothetical 28.3 kDa protein TR:AAK83000 (EMBL:AF285783) (258 aa) fasta scores: E(): 2e-14, 32.95% id in 264 aa
NP_880962.1	Similar to others Escherichia coli hypothetical protein yeiw yeiw or b2170.1 SW:YEIW_ECOLI (P58039) (84 aa) fasta scores: E(): 2.8e-21, 65.47% id in 84 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1578.1 pa1578.1 SW:YF7A_PSEAE (P58040) (84 aa) fasta scores: E(): 4.2e-17, 56.09% id in 82 aa
NP_880963.1	May be involved in LPS biosynthesis. Similar to many eg. Pseudomonas aeruginosa glucosyltransferase I WaaG TR:Q9S648 (EMBL:AF090724) (373 aa) fasta scores: E(): 3e-13, 29.21% id in 356 aa, and to Serratia marcescens glycosyltransferase TR:Q9X977 (EMBL:U52844) (375 aa) fasta scores: E(): 3.6e-10, 28.98% id in 376 aa
NP_880964.1	Similar to Xylella fastidiosa hypothetical protein Xf0878 TR:Q9PF00 (EMBL:AE003927) (257 aa) fasta scores: E(): 2.5e-36, 47.89% id in 238 aa, and to Streptomyces coelicolor  polysaccharide deacetylase SCC61a.31 TR:Q9KYG2 (EMBL:AL356595) (229 aa) fasta scores: E(): 1.9e-20, 38.29% id in 235 aa
NP_880965.2	Similar to many eg. Escherichia coli outer-membrane protein YhbX precursor or b3173 SW:YHBX_ECOLI (P42640) (541 aa) fasta scores: E(): 4.4e-53, 36.45% id in 480 aa
NP_880966.1	May be involved in LPS biosynthesis. Similar to Deinococcus radiodurans conserved hypothetical protein dr1555 TR:Q9RU40 (EMBL:AE001999) (411 aa) fasta scores: E(): 1.8e-12, 27.9% id in 301 aa, and to Rhizobium meliloti lipopolysaccharide core biosynthesis mannosyltransferase lpsb lpsb or r01572 or smc01219 SW:LPSB_RHIME (Q9R9N2) (351 aa) fasta scores: E(): 7.6e-08, 25.58% id in 383 aa
NP_880967.1	May be involved in LPS biosynthesis. Similar to many eg. Haemophilus ducreyi beta 1-4 glucosyltransferase LgtF TR:Q9L875 (EMBL:AF215936) (252 aa) fasta scores: E(): 5.2e-38, 44.49% id in 245 aa
NP_880968.1	Similar to many eg. Xylella fastidiosa hypothetical protein Xf1469 xf1469 TR:Q9PDB0 (EMBL:AE003977) (284 aa) fasta scores: E(): 1.4e-61, 56.02% id in 282 aa
NP_880969.1	May be involved in LPS biosynthesis. Similar to Xylella fastidiosa hypothetical protein Xf1470 TR:Q9PDA9 (EMBL:AE003977) (376 aa) fasta scores: E(): 7e-29, 44.41% id in 376 aa, and to Rhizobium meliloti lipopolysaccharide core biosynthesis mannosyltransferase LpsB or r01572 or smc01219 SW:LPSB_RHIME (Q9R9N2) (351 aa) fasta scores: E(): 3.2e-13, 29.64% id in 280 aa
NP_880970.1	catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase
NP_880971.1	Similar to Xylella fastidiosa aspartyl/asparaginyl beta-hydroxylase xf2100 TR:Q9PBP0 (EMBL:AE004025) (301 aa) fasta scores: E(): 2.1e-76, 57.33% id in 300 aa, and to Salmonella typhimurium, and  dioxygenase LpxO or PagQ TR:Q9KGX6 (EMBL:AF279438) (302 aa) fasta scores: E(): 2.4e-69, 55.67% id in 291 aa
NP_880972.1	Similar to Pseudomonas aeruginosa probable ATP-dependent helicase pa3297 TR:Q9HYU6 (EMBL:AE004752) (1326 aa) fasta scores: E(): 1.4e-181, 47.69% id in 1325 aa, and to Escherichia coli ATP-dependent helicase HrpA or b1413 SW:HRPA_ECOLI (P43329) (1300 aa) fasta scores: E(): 2.5e-85, 46.11% id in 1275 aa
NP_880973.1	catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis
NP_880974.1	Similar to Neisseria meningitidis (serogroup A), and hypothetical protein nma0419 or nmb2021 TR:Q9JQP5 (EMBL:AL162753) (88 aa) fasta scores: E(): 2.2e-19, 60.92% id in 87 aa, and to Escherichia coli, and protein YggX or b2962 or z4307 or ecs3838 SW:YGGX_ECOLI (P52065) (90 aa) fasta scores: E(): 1.2e-15, 54.65% id in 86 aa
NP_880975.1	Similar to Pseudomonas aeruginosa non-hemolytic phospholipase C precursor PlcN or pa3319 SW:PHLN_PSEAE (P15713) (692 aa) fasta scores: E(): 1.9e-64, 45.1% id in 674 aa
NP_880976.1	Similar to proteins thought to be involved in phosphate transport eg. Pseudomonas putida phosphate transport system protein PhoU SW:PHOU_PSEPU (Q9Z410) (256 aa) fasta scores: E(): 6.3e-38, 46.98% id in 249 aa, and to Escherichia coli phosphate transport system protein PhoU or nmpa or b3724 SW:PHOU_ECOLI (P07656) (241 aa) fasta scores: E(): 2.3e-29, 40.92% id in 237 aa
NP_880977.1	Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway
NP_880978.1	Similar to Escherichia coli AidB protein or b4187 SW:AIDB_ECOLI (P33224) (541 aa) fasta scores: E(): 2.3e-87, 48% id in 550 aa
NP_880979.1	Similar to Xylella fastidiosa hypothetical protein Xf0413 TR:Q9PG89 (EMBL:AE003892) (456 aa) fasta scores: E(): 1.9e-67, 50.8% id in 437 aa, and to Streptococcus pyogenes hypothetical protein Spy0266 TR:Q9A1H6 (EMBL:AE006493) (423 aa) fasta scores: E(): 1.6e-44, 41.83% id in 392 aa
NP_880980.1	Weakly similar to Escherichia coli O157:H7 EDL933 hypothetical protein YrbL TR:AAG58341 (EMBL:AE005548) (210 aa) fasta scores: E(): 0.023, 26.57% id in 207 aa. Also similar to BP3672, 45.673% identity (47.500% ungapped) in 208 aa overlap.
NP_880981.1	responsible for recognizing base lesions in the genome and initiating base excision DNA repair
NP_880982.1	Similar to many eg. Xylella fastidiosa hypothetical protein Xf0115 TR:Q9PH31 (EMBL:AE003865) (124 aa) fasta scores: E(): 1.9e-19, 49.12% id in 114 aa, and to Rhizobium meliloti hypothetical protein Smc00386 TR:CAC41743 (EMBL:AL591783) (116 aa) fasta scores: E(): 8.8e-13, 37.71% id in 114 aa
NP_880983.1	Similar to Escherichia coli putrescine transport system permease PotI or b0857 SW:POTI_ECOLI (P31136) (281 aa) fasta scores: E(): 3.6e-58, 59.14% id in 257 aa, and to Neisseria meningitidis  polyamine permease inner membrane protein NMA0818 TR:Q9JVJ1 (EMBL:AL162754) (295 aa) fasta scores: E(): 2.7e-55, 54.78% id in 261 aa
NP_880984.1	Similar to Pseudomonas aeruginosa polyamine transport protein PotH or pa0303 TR:Q9I6I8 (EMBL:AE004468) (293 aa) fasta scores: E(): 1.8e-66, 58.88% id in 287 aa, and to Escherichia coli putrescine transport system permease or b0856 SW:POTH_ECOLI (P31135) (317 aa) fasta scores: E(): 2.9e-65, 56.53% id in 283 aa
NP_880985.1	Similar to Neisseria meningitidis  polyamine permease ATP-binding protein NMA0816 TR:Q9JVJ3 (EMBL:AL162754) (374 aa) fasta scores: E(): 1.1e-73, 55.28% id in 369 aa, and to Escherichia coli putrescine transport ATP-binding protein PotG or b0855 SW:POTG_ECOLI (P31134) (377 aa) fasta scores: E(): 2.5e-67, 52.79% id in 358 aa
NP_880986.1	Similar to Escherichia coli O157:H7 periplasmic putrescine-binding permease ecs0934 TR:BAB34357 (EMBL:AP002553) (370 aa) fasta scores: E(): 2.2e-71, 49.17% id in 362 aa, and to Escherichia coli putrescine-binding periplasmic protein precursor PotF or b0854 SW:POTF_ECOLI (P31133) (370 aa) fasta scores: E(): 5.3e-71, 48.89% id in 362 aa
NP_880987.1	catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position
NP_880988.1	Similar to Burkholderia pseudomallei  globin TR:AAK38159 (EMBL:AY030274) (170 aa) fasta scores: E(): 7.6e-35, 60% id in 140 aa, and to Mycobacterium tuberculosis, and hemoglobin-like protein Hbo GlbO or Rv2470 or Mt2546 or Mtv008.26 TR:AAK46846 (EMBL:AL021246) (134 aa) fasta scores: E(): 3.3e-09, 41.34% id in 104 aa
NP_880989.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa2858 TR:Q9HZY6 (EMBL:AE004712) (830 aa) fasta scores: E(): 7.8e-109, 42.34% id in 836 aa
NP_880990.1	Similar to Rhizobium meliloti  C4-dicarboxylate transport system, C4-dicarboxylate-binding protein precursor signal peptide Smb21438 TR:CAC49667 (EMBL:AL603646) (332 aa) fasta scores: E(): 9.2e-37, 36.19% id in 315 aa, and to Escherichia coli  ABC transporter periplasmic binding protein YiaO precursor or b3579 SW:YIAO_ECOLI (P37676) (328 aa) fasta scores: E(): 5.1e-33, 35.43% id in 302 aa
NP_880991.1	Similar to Bacillus halodurans c4-dicarboxylate transport system Bh0702 TR:Q9KEZ7 (EMBL:AP001509) (177 aa) fasta scores: E(): 1.8e-08, 29.16% id in 144 aa, and to Rhizobium meliloti  permease Bmb20296 TR:CAC48686 (EMBL:AL603642) (172 aa) fasta scores: E(): 4.4e-07, 27.77% id in 144 aa
NP_880992.1	Similar to Bacillus halodurans C4-dicarboxylate transport system Bh2671 TR:Q9K9H6 (EMBL:AP001516) (426 aa) fasta scores: E(): 2.1e-63, 43.26% id in 416 aa, and to Pseudomonas aeruginosa probable C4-dicarboxylate transporter Pa5169 TR:Q9HU16 (EMBL:AE004929) (427 aa) fasta scores: E(): 2.8e-59, 42.92% id in 417 aa
NP_880993.1	transposase for IS481 element
NP_880994.1	type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH
NP_880995.1	Similar to many eg. Pseudomonas aeruginosa hypothetical protein Pa0760 TR:Q9I5G9 (EMBL:AE004511) (84 aa) fasta scores: E(): 5.6e-05, 36.47% id in 85 aa, and to Vibrio cholerae hypothetical protein Vc2471 TR:Q9KPA2 (EMBL:AE004316) (86 aa) fasta scores: E(): 0.00038, 31.64% id in 79 aa
NP_880996.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase
NP_880997.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol
NP_880998.1	Similar to Escherichia coli succinate dehydrogenase hydrophobic membrane anchor protein SdhD or b0722 SW:DHSD_ECOLI (P10445) (115 aa) fasta scores: E(): 1.2e-08, 35.45% id in 110 aa, and to Rhodoferax fermentans fumarate reductase cytochrome b small subunit TR:O83000 (EMBL:AB015757) (121 aa) fasta scores: E(): 4.3e-17, 43.9% id in 123 aa
NP_880999.1	Similar to Escherichia coli, and succinate dehydrogenase cytochrome B-556 subunit SdhC or CybA or b0721 or z0875 or ecs0746 SW:DHSC_ECOLI (P10446) (129 aa) fasta scores: E(): 1.7e-06, 27.27% id in 132 aa, and to Rhodoferax fermentans fumarate reductase cytochrome B large subunit TR:O82999 (EMBL:AB015757) (147 aa) fasta scores: E(): 4e-17, 44.89% id in 147 aa
NP_881000.1	Similar to Deinococcus radiodurans transcriptional regulator, GntR family Dra0211 TR:Q9RYU6 (EMBL:AE001863) (279 aa) fasta scores: E(): 2.9e-18, 35.71% id in 238 aa, and to Streptomyces coelicolor  GntR-family transcriptional regulator sc7e4.28C TR:Q9K492 (EMBL:AL359214) (254 aa) fasta scores: E(): 2.5e-14, 31.44% id in 229 aa
NP_881001.1	catalyzes the oxidation of malate to oxaloacetate
NP_881002.1	catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity
NP_881003.2	Catalyzes the conversion of citrate to isocitrate
NP_881004.1	Similar to Alcaligenes eutrophus hypothetical 41.5 kDa protein TR:AAL03991 (EMBL:AF325554) (396 aa) fasta scores: E(): 3.3e-118, 78.28% id in 396 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0793 TR:Q9I5E5 (EMBL:AE004514) (395 aa) fasta scores: E(): 1.8e-110, 71.97% id in 396 aa. Also similar to BP0922, 35.459% identity (36.968% ungapped) in 392 aa overlap.
NP_881005.1	functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C
NP_881006.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa0661 TR:Q9I5R0 (EMBL:AE004501) (140 aa) fasta scores: E(): 1.2e-26, 49.28% id in 140 aa, and to Neisseria meningitidis conserved hypothetical inner membrane protein NMA2177 TR:Q9JSR1 (EMBL:AL162758) (145 aa) fasta scores: E(): 6.3e-22, 45.2% id in 146 aa
NP_881007.1	Similar to Neisseria meningitidis Tou5 TR:Q9RMM0 (EMBL:AF194079) (380 aa) fasta scores: E(): 1.2e-58, 43.53% id in 379 aa. Also similar to the N-terminal portion of others eg. Escherichia coli hypothetical protein YcbY or b0948 SW:YCBY_ECOLI (P75864) (702 aa) fasta scores: E(): 2.6e-39, 34.36% id in 387 aa. Note possible alternative downstream translational start sites.
NP_881009.1	Similar to Caulobacter crescentus hypothetical protein Cc3344 TR:Q9A362 (EMBL:AE005996) (281 aa) fasta scores: E(): 3.3e-64, 58.98% id in 256 aa, and to Rhizobium loti Mll0806 protein Mll0806 TR:Q98LZ6 (EMBL:AP002995) (260 aa) fasta scores: E(): 1.6e-56, 52.84% id in 246 aa
NP_881010.1	Similar to many predicted fatty-acid-CoA ligases eg. Rhizobium meliloti  fatty-acid-CoA ligase Smc00741 TR:CAC47210 (EMBL:AL591791) (548 aa) fasta scores: E(): 2.7e-92, 45.38% id in 553 aa
NP_881011.1	Similar to Caulobacter crescentus bacterial transferase family protein cc2643 TR:Q9A526 (EMBL:AE005932) (176 aa) fasta scores: E(): 2.7e-29, 49.71% id in 173 aa, and to Escherichia coli phenylacetic acid degradation protein PaaY or b1400 SW:PAAY_ECOLI (P77181) (196 aa) fasta scores: E(): 3.6e-19, 41.35% id in 162 aa
NP_881012.1	Similar to Escherichia coli, and 33 kDa chaperonin HslO or b3401 or z4755 or ecs4243 SW:HSLO_ECOLI (P45803) (292 aa) fasta scores: E(): 1.1e-18, 36.66% id in 300 aa, and to Pseudomonas aeruginosa 33 kDa chaperonin HslO or pa5193 SW:HSLO_PSEAE (Q9HTZ6) (297 aa) fasta scores: E(): 1.3e-38, 42.61% id in 291 aa
NP_881014.1	Similar to Rhizobium loti Mlr0979 protein TR:Q98LL3 (EMBL:AP002996) (138 aa) fasta scores: E(): 1.7e-09, 36.15% id in 130 aa, and to Agrobacterium tumefaciens strC58 Agr_l_1124p TR:AAK89137 (EMBL:AE008254) (137 aa) fasta scores: E(): 2.2e-09, 39.23% id in 130 aa
NP_881015.1	Similar to many eg. Rhizobium loti Mll1641 protein TR:Q98K47 (EMBL:AP002997) (152 aa) fasta scores: E(): 4.1e-24, 46.89% id in 145 aa, and to Streptomyces coelicolor hypothetical 17.3 kDa protein SCC57A.14 TR:Q9RDI4 (EMBL:AL136519) (161 aa) fasta scores: E(): 3.5e-19, 46.66% id in 135 aa. Streptomyces coelicolor appears to contain many paralogues of this protein. Also similar to BP1190, 42.553% identity (42.553% ungapped) in 141 aa overlap.
NP_881016.1	Similar to many eg. Rhizobium meliloti hypothetical protein Smb20701 TR:CAC49808 (EMBL:AL603647) (250 aa) fasta scores: E(): 1e-59, 68.67% id in 249 aa, and to Streptomyces coelicolor conserved hypothetical protein SC4B10.09C TR:Q9FC78 (EMBL:AL391515) (248 aa) fasta scores: E(): 6.5e-54, 63% id in 246 aa. Streptomyces coelicolor appears to contain many paralogues of this protein.
NP_881017.1	Similar to many from Rhizobium spp., one of which (SW:CYA3_RHIME) lies alongside an adenylate cyclase. It seems possible that many of the Rhizobium spp. proteins have mistakenly been predicted to be adenylate cyclases rather than transcriptional regulators. Similar to Rhizobium meliloti  regulatory protein, possibly two-component response regulator smb20702 TR:CAC49809 (EMBL:AL603647) (554 aa) fasta scores: E(): 4.9e-103, 62.43% id in 567 aa and to Rhizobium meliloti  adenylate cyclase 3 Cya3 or sma1583 SW:CYA3_RHIME (Q9Z3Q0) (586 aa) fasta scores: E(): 5.1e-38, 35.52% id in 442 aa.
NP_881018.1	forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein
NP_881019.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
NP_881020.1	Similar to Rhizobium meliloti hypothetical protein Smc00411 TR:CAC41768 (EMBL:AL591783) (95 aa) fasta scores: E(): 8.3e-08, 38.46% id in 91 aa, and to Agrobacterium tumefaciens strC58 Agr_c_513p TR:AAK86112 (EMBL:AE007968) (95 aa) fasta scores: E(): 2.2e-07, 38.46% id in 91 aa
NP_881021.1	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis
NP_881022.1	CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
NP_881023.1	transposase for IS481 element
NP_881024.1	Similar to many (pro- and eukaryotic) eg. Neisseria meningitidis aminopeptidase,  nmb1428 TR:Q9JYU4 (EMBL:AE002492) (598 aa) fasta scores: E(): 4.4e-121, 53.83% id in 600 aa, and to Homo sapiens cytosolic aminopeptidase P TR:Q9NQW7 (EMBL:AF272981) (623 aa) fasta scores: E(): 1.6e-37, 38.71% id in 620 aa, and to Mus musculus cytosolic aminopeptidase P TR:AAK48945 (EMBL:AF363970) (623 aa) fasta scores: E(): 4.7e-37, 38.54% id in 620 aa
NP_881025.1	Similar to predicted (no evidence) aminopeptidases eg. Rhizobium meliloti  D-aminopeptidase sma0095 TR:AAK64706 (EMBL:AE007199) (345 aa) fasta scores: E(): 4.3e-51, 48.29% id in 352 aa, and to Ochrobactrum anthropi D-aminopeptidase DmpA TR:Q59632 (EMBL:X97669) (375 aa) fasta scores: E(): 9.9e-34, 37.7% id in 358 aa
NP_881026.1	Similar to Escherichia coli hypothetical ABC transporter permease YliD or b0832 SW:YLID_ECOLI (P75799) (303 aa) fasta scores: E(): 1.4e-80, 71.88% id in 281 aa, and to Bacillus firmus dipeptide transport system permease DppC SW:DPPC_BACFI (P94312) (304 aa) fasta scores: E(): 1.6e-45, 45.12% id in 277 aa
NP_881027.1	Similar to Escherichia coli hypothetical ABC transporter permease YliC or b0831 SW:YLIC_ECOLI (P75798) (306 aa) fasta scores: E(): 9.4e-92, 76.47% id in 306 aa, and to Bacillus subtilis dipeptide transport system permease DppB or dciaB SW:DPPB_BACSU (P26903) (308 aa) fasta scores: E(): 9.5e-39, 37.25% id in 306 aa
NP_881028.1	Similar to Escherichia coli  binding protein YliB precursor or b0830 SW:YLIB_ECOLI (P75797) (512 aa) fasta scores: E(): 1.3e-117, 57.17% id in 516 aa, and to Escherichia coli periplasmic dipeptide transport protein precursor DppA or b3544 SW:DPPA_ECOLI (P23847) (535 aa) fasta scores: E(): 2e-32, 30.54% id in 537 aa
NP_881029.1	Similar to Agrobacterium tumefaciens strC58 Agr_l_685p TR:AAK88917 (EMBL:AE008234) (606 aa) fasta scores: E(): 3.4e-108, 55.39% id in 621 aa, and to Escherichia coli hypothetical ABC transporter ATP-binding protein YliA or b0829 SW:YLIA_ECOLI (P75796) (629 aa) fasta scores: E(): 5.9e-70, 66.98% id in 621 aa
NP_881030.1	Similar to Vibrio cholerae asparaginase,  vc2603 TR:Q9KNX7 (EMBL:AE004327) (326 aa) fasta scores: E(): 4.2e-47, 48.75% id in 320 aa, and to Lupinus luteus L-asparaginase SW:ASPG_LUPLU (Q9ZSD6) (325 aa) fasta scores: E(): 9.7e-40, 42.99% id in 307 aa
NP_881031.1	Similar to Clostridium acetobutylicum transcriptional regulators, RpiR family cac1850 TR:Q97I06 (EMBL:AE007693) (293 aa) fasta scores: E(): 1.3e-17, 33.46% id in 263 aa
NP_881032.1	Similar to Deinococcus radiodurans CoA transferase, subunit B dra0067 TR:Q9RZ87 (EMBL:AE001862) (209 aa) fasta scores: E(): 6.4e-61, 80.09% id in 211 aa, and to Helicobacter pylori succinyl-coa:3-ketoacid-coenzyme A transferase subunit B ScoB or hp0692 SW:SCOB_HELPY (P56007) (207 aa) fasta scores: E(): 2.8e-44, 60.76% id in 209 aa. Also similar to BP1789 (46.667% identity in 210 aa overlap), and to BP222 (49.756% identity in 205 aa overlap).
NP_881033.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa2801 TR:Q9I042 (EMBL:AE004707) (134 aa) fasta scores: E(): 4.8e-12, 36.97% id in 119 aa
NP_881034.1	Similar to many eg. Pseudomonas aeruginosa electron transfer flavoprotein-ubiquinone oxidoreductase Pa2953 TR:Q9HZP5 (EMBL:AE004721) (551 aa) fasta scores: E(): 1.7e-137, 61.9% id in 546 aa, and to Homo sapiens electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial precursor EtfdH SW:ETFD_HUMAN (Q16134) (617 aa) fasta scores: E(): 4.5e-83, 55.43% id in 552 aa
NP_881035.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa5343 TR:Q9HTL5 (EMBL:AE004946) (283 aa) fasta scores: E(): 2.3e-30, 42.6% id in 284 aa, and to Escherichia coli, and protein YeeZ precursor or b2016 or z3178 or ecs2818 SW:YEEZ_ECOLI (P76370) (274 aa) fasta scores: E(): 2.4e-13, 32.5% id in 283 aa
NP_881036.1	Similar to Streptomyces galilaeus AknT TR:Q9L4U5 (EMBL:AF264025) (443 aa) fasta scores: E(): 0.0076, 28.02% id in 389 aa, and to Rhodococcus fascians cytochrome p450 Fas1 or cyp105e1 SW:FAS1_RHOFA (P46373) (399 aa) fasta scores: E(): 0.48, 23.63% id in 402 aa
NP_881037.1	Similar to Rhizobium loti Mll4602 protein TR:Q98DQ1 (EMBL:AP003004) (114 aa) fasta scores: E(): 9.8e-29, 69.36% id in 111 aa
NP_881038.1	Similar to Escherichia coli low-specificity L-threonine aldolase LtaE or b0870 SWALL:LTAE_ECOLI (SWALL:P75823) (333 aa) fasta scores: E(): 8.3e-65, 55.49% id in 337 aa, and to Pseudomonas aeruginosa L-allo-threonine aldolase Gly1 or pa0902 SWALL:O50178 (EMBL:AF011922) (334 aa) fasta scores: E(): 2e-69, 61.81% id in 330 aa
NP_881039.1	Similar to several including: Escherichia coli O157:H7 EDL933 hypothetical protein YijE TR:AAG59144 (EMBL:AE005625) (312 aa) fasta scores: E(): 5.7e-41, 44.01% id in 284 aa and to Escherichia coli hypothetical protein YijE or b3943 SW:YIJE_ECOLI (P32667) (301 aa) fasta scores: E(): 9.6e-41, 44.01% id in 284 aa
NP_881040.1	Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA
NP_881041.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa5352 pa5352 TR:Q9HTK6 (EMBL:AE004947) (133 aa) fasta scores: E(): 4.8e-26, 60.9% id in 133 aa, and to Escherichia coli protein glcg glcg or b2977 SW:GLCG_ECOLI (P45504) (134 aa) fasta scores: E(): 8.9e-24, 56.39% id in 133 aa
NP_881042.1	Similar in parts to several including: Neisseria meningitidis outer membrane protein precursor Gna2001 TR:Q9JPN8 (EMBL:AF226471) (251 aa) fasta scores: E(): 2.1e-23, 44.37% id in 160 aa and to Xylella fastidiosa hypothetical protein Xf0653 TR:Q9PFK4 (EMBL:AE003909) (212 aa) fasta scores: E(): 1.5e-19, 47.93% id in 121 aa
NP_881043.1	Similar to Campylobacter jejuni hypothetical protein Cj1384C TR:Q9PMR6 (EMBL:AL139078) (104 aa) fasta scores: E(): 0.0014, 30.58% id in 85 aa and to Clostridium acetobutylicum predicted diverged chey-domain Cac1602 TR:Q97IN8 (EMBL:AE007670) (103 aa) fasta scores: E(): 1.4e-07, 34.06% id in 91 aa
NP_881044.1	transposase for IS481 element
NP_881045.1	Similar to several LysR-family transcriptional regulators including: Pseudomonas aeruginosa CysB or pa1754 TR:O05926 (EMBL:U95379) (324 aa) fasta scores: E(): 1.6e-49, 46.45% id in 310 aa and to Salmonella typhimurium cys regulon transcriptional activator CysB or Stm1713 SW:CYSB_SALTY (P06614) (324 aa) fasta scores: E(): 6.7e-49, 45.68% id in 313 aa
NP_881046.1	Highly similar to Eukaryotic methylmalonate semi-aldehyde dehydrogenases. Note as you would expect the predicted product of this CDS lacks the N-terminal Mitochondrial targeting signal sequence possessed by the Eukaryotic proteins. Similar to Arabidopsis thaliana methylmalonate semi-aldehyde dehydrogenase At2g14170 TR:Q9SI43 (EMBL:AC007197) (607 aa) fasta scores: E(): 4.5e-113, 56.87% id in 487 aa and to Homo sapiens methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial precursor MmsdH SW:MMSA_HUMAN (Q02252) (535 aa) fasta scores: E(): 1.6e-110, 55.27% id in 474 aa. Also similar to prokaryotic dehydrogenases inculding: Pseudomonas aeruginosa probable aldehyde dehydrogenase Pa0747 TR:Q9I5I2 (EMBL:AE004509) (502 aa) fasta scores: E(): 4.4e-102, 53.13% id in 495 aa
NP_881047.1	Similar to many members of the ABC family of transport proteins incuding: Rhizobium meliloti periplasmic binding ABC transporter protein Smc03121 TR:CAC47551 (EMBL:AL591792) (401 aa) fasta scores: E(): 3.7e-75, 50.5% id in 394 aa and to Azoarcus evansii substrate binding protein TR:AAL02070 (EMBL:AF320253) (391 aa) fasta scores: E(): 1.5e-13, 25.26% id in 372 aa
NP_881048.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa3711 SWALL:Q9HXT0 (EMBL:AE004790) (301 aa) fasta scores: E(): 7.6e-46, 43.37% id in 302 aa, and to Rhizobium meliloti transcription regulator protein R02971 or Smc03122 SWALL:Q92LQ9 (EMBL:AL591792) (315 aa) fasta scores: E(): 2.4e-42, 39.93% id in 303 aa
NP_881049.1	Similar to Neisseria meningitidis hypothetical protein Nmb1570 TR:Q9JYI6 (EMBL:AE002507) (371 aa) fasta scores: E(): 1.6e-33, 32.86% id in 359 aa and to Neisseria meningitidis conserved integral membrane hypothetical protein Nma1759 TR:Q9JTI7 (EMBL:AL162757) (371 aa) fasta scores: E(): 2.1e-33, 32.78% id in 363 aa
NP_881050.1	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides
NP_881051.1	Similar to Rhizobium meliloti hypothetical protein Smc00586 TR:CAC45735 (EMBL:AL591786) (149 aa) fasta scores: E(): 8.8e-06, 29.8% id in 151 aa and weakly to Escherichia coli DNA polymerase III, chi subunit HolC or b4259 SW:HOLC_ECOLI (P28905) (147 aa) fasta scores: E(): 0.00013, 26.24% id in 141 aa
NP_881052.1	no significant database hits
NP_881053.1	Similar to several including: Escherichia coli hypothetical protein YccA or b0970 SW:YCCA_ECOLI (P06967) (219 aa) fasta scores: E(): 3.5e-22, 42.38% id in 210 aa and to Escherichia coli O157:H7  carrier/transport protein Ecs1054 TR:BAB34477 (EMBL:AP002554) (219 aa) fasta scores: E(): 4.6e-22, 42.38% id in 210 aa
NP_881054.1	Similar in parts to Rhizobium meliloti hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 3.2e-45, 43.75% id in 320 aa, and to Alcaligenes eutrophus hypothetical 35.7 kDa protein MacB TR:Q9RBG2 (EMBL:AF130250) (340 aa) fasta scores: E(): 1.4e-36, 38.65% id in 313 aa
NP_881055.1	Weakly similar to several proteins of undefined function including: Agrobacterium tumefaciens StrC58 TR:AAK90609 (EMBL:AE007893) (335 aa) fasta scores: E(): 5.1e-19, 31.81% id in 286 aa, and to Rhizobium loti Mlr7142 protein TR:Q987A0 (EMBL:AP003011) (349 aa) fasta scores: E(): 1.6e-16, 29.24% id in 277 aa
NP_881056.1	Similar to many LysR-family transcriptional regulators including: Escherichia coli LysR or b2839 SW:LYSR_ECOLI (P03030) (311 aa) fasta scores: E(): 6.5e-21, 31.74% id in 293 aa and to Rhizobium loti Mlr7023 TR:Q987J8 (EMBL:AP003010) (301 aa) fasta scores: E(): 3.9e-17, 29.23% id in 301 aa
NP_881057.1	Similar to the N-termini of many RecO orthologues involved in recombination repair, including: Vibrio cholerae DNA repair protein RecO or Vc2459 TR:Q9KPB4 (EMBL:AE004316) (241 aa) fasta scores: E(): 2.7e-18, 42.85% id in 161 aa and to Pasteurella multocida DNA repair protein RecO or Pm1867 SW:RECO_PASMU (P57974) (240 aa) fasta scores: E(): 1.8e-17, 45.39% id in 141 aa
NP_881058.1	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome
NP_881059.1	cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity
NP_881060.1	Previously sequenced Bordetella pertussis leader peptidase Lep TR:Q9RN42 (EMBL:AF188620) (294 aa) fasta scores: E(): 1.9e-121, 100% id in 294 aa. Highly similar to Escherichia coli signal peptidase I LepB or b2568 SW:LEP_ECOLI (P00803) (324 aa) fasta scores: E(): 3.7e-22, 41.81% id in 342 aa, and to
NP_881061.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
NP_881062.1	Similar to Pseudomonas aeruginosa serine protease MucD or Pa0766 TR:Q57155 (EMBL:U49151) (474 aa) fasta scores: E(): 1.4e-63, 45.88% id in 486 aa and to Azotobacter vinelandii MucD TR:Q44476 (EMBL:U30799) (473 aa) fasta scores: E(): 2.4e-47, 37.89% id in 504 aa
NP_881063.1	Similar to many regulators of rpoE/algU which is located upstream, including: Azotobacter vinelandii MucB TR:Q9RCH6 (EMBL:U22660) (317 aa) fasta scores: E(): 4.7e-15, 32.11% id in 327 aa and Escherichia coli sigma-e factor regulatory protein RseB precursor SW:RSEB_ECOLI (P46186) (318 aa) fasta scores: E(): 9.5e-10, 25.32% id in 308 aa
NP_881064.1	no significant database hits
NP_881065.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response
NP_881066.1	weakly similar to Gallus gallus transport associated protein 2 Tap2 TR:O73903 (EMBL:AL023516) (701 aa) fasta scores: E(): 1.6, 32.21% id in 149 aa and to Streptomyces coelicolor  integral membrane protein Sc3c9.20C TR:CAC42759 (EMBL:AL592262) (618 aa) fasta scores: E(): 3.8, 32.94% id in 173 aa
NP_881067.1	FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
NP_881068.1	carries the fatty acid chain in fatty acid biosynthesis
NP_881069.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
NP_881070.1	Highly similar to Escherichia coli malonyl CoA-acyl carrier protein transacylase FabD or TfpA or b1092 SW:FABD_ECOLI (P25715) (308 aa) fasta scores: E(): 2.9e-55, 58.36% id in 305 aa and to Salmonella typhimurium malonyl CoA-acyl carrier protein transacylase FabD or Stm1194 SW:FABD_SALTY (O85140) (308 aa) fasta scores: E(): 6.9e-56, 59.01% id in 305 aa
NP_881071.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
NP_881072.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
NP_881073.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
NP_881074.1	Weakly similar to Neisseria meningitidis hypothetical protein Nma0545 TR:Q9JW51 (EMBL:AL162753) (167 aa) fasta scores: E(): 2e-07, 30.38% id in 181 aa and to Escherichia coli hypothetical protein YceD or b1088 or z1727 or Ecs1466 SW:YCED_ECOLI (P14189) (173 aa) fasta scores: E(): 3.7e-07, 39.82% id in 113 aa
NP_881075.1	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell
NP_881076.1	Similar to many including: Neisseria meningitidis hypothetical protein Nmb1908 TR:Q9JXS3 (EMBL:AE002540) (241 aa) fasta scores: E(): 2.4e-36, 47.45% id in 236 aa. Also similar to many proposed methyltransferases e.g. Chlamydia trachomatis SAM-dependent methyltransferase YraL or Ct048 TR:O84051 (EMBL:AE001279) (237 aa) fasta scores: E(): 1.3e-19, 38.75% id in 240 aa
NP_881077.1	Similar to Escherichia coli probable N-acetylmuramoyl-L-alanine amidase YbjR or b0867 SW:YBJR_ECOLI (P75820) (276 aa) fasta scores: E(): 7.3e-29, 43.79% id in 274 aa, and to Caulobacter crescentus N-acetylmuramoyl-L-alanine amidase Cc2567 TR:Q9A590 (EMBL:AE005925) (242 aa) fasta scores: E(): 5.2e-16, 42.55% id in 235 aa
NP_881078.1	Similar to membrane transport proteins including: Legionella pneumophila  transport protein TR:Q9RG52 (EMBL:AF153695) (387 aa) fasta scores: E(): 1.4e-13, 26.82% id in 369 aa, Pseudomonas aeruginosa probable mfs transporter pa3303 TR:Q9HYU1 (EMBL:AE004752) (391 aa) fasta scores: E(): 2.4e-09, 30.33% id in 333 aa and Bacillus subtilis hexuronate transporter exuT SW:EXUT_BACSU (O34456) (422 aa) fasta scores: E(): 1.2e-06, 24.1% id in 419 aa
NP_881079.1	Similar to several including: Vibrio cholerae hypothetical protein Vc2355 vc2355 TR:Q9KPL2 (EMBL:AE004305) (257 aa) fasta scores: E(): 1.3e-51, 51.56% id in 256 aa, and to Escherichia coli protein yaaa yaaa or b0006 SW:YAAA_ECOLI (P11288) (258 aa) fasta scores: E(): 2.5e-51, 52.36% id in 254 aa
NP_881080.1	transposase for IS481 element
NP_881081.1	Similar to Alcaligenes eutrophus D-beta-hydroxybutyrate dehydrogenase HbdH1 SW:BDHA_ALCEU (Q9X6U2) (258 aa) fasta scores: E(): 7.9e-57, 63.84% id in 260 aa and to Rhizobium meliloti D-beta-hydroxybutyrate dehydrogenase BdhA or Rb1136 or Smb21010 SW:BDHA_RHIME (O86034) (258 aa) fasta scores: E(): 1e-45, 54.29% id in 256 aa
NP_881082.1	Similar to Escherichia coli glutathione-regulated potassium-efflux system protein KefB or TrkB or b3350 SW:KEFB_ECOLI (P45522) (601 aa) fasta scores: E(): 2.2e-55, 45.78% id in 380 aa and to Vibrio cholerae glutathione-regulated potassium-efflux system protein KefB vc2606 TR:Q9KNX4 (EMBL:AE004327) (656 aa) fasta scores: E(): 2.8e-53, 46.25% id in 387 aa
NP_881083.1	Previously sequenced in Bordetella bronchiseptica alcaligin biosynthesis enzyme AlcA SW:ALCA_BORBR (Q44740) (461 aa) fasta scores: E(): 1.4e-197, 100% id in 461 aa. Also similar to Escherichia coli L-lysine 6-monooxygenase IucD or AerA SW:IUCD_ECOLI (P11295) (425 aa) fasta scores: E(): 2.5e-37, 28.97% id in 428 aa
NP_881084.1	Previously sequenced in Bordetella bronchiseptica AlcB iron siderophore alcaligin biosynthetic protein TR:P94254 (EMBL:U61153) (201 aa) fasta scores: E(): 7.8e-87, 100% id in 201 aa. Also similar to Escherichia coli aerobactin siderophore biosynthesis protein IucB SW:IUCB_ECOLI (Q47317) (315 aa) fasta scores: E(): 1.1e-05, 24.4% id in 168 aa
NP_881085.1	Previously sequenced in Bordetella bronchiseptica AlcC iron siderophore alcaligin biosynthesis protein TR:P94255 (EMBL:U61153) (618 aa) fasta scores: E(): 0, 99.83% id in 618 aa. Also similar to Echerichia coli aerobactin siderophore biosynthesis protein IucC SW:IUCC_ECOLI (Q47318) (580 aa) fasta scores: E(): 8.9e-46, 28.57% id in 595 aa
NP_881086.1	Previously sequenced in Bordetella bronchiseptica hypothetical protein AlcD predicted to be involved in the iron siderophore alcaligin biosynthesis TR:O52832 (EMBL:AJ000061) (267 aa) fasta scores: E(): 3.7e-105, 93.63% id in 267 aa
NP_881087.1	Previously sequenced in Bordetella bronchiseptica AlcE, involved in the iron siderophore alcaligin biosynthesis, TR:O52833 (EMBL:AJ000061) (397 aa) fasta scores: E(): 7.3e-176, 99.74% id in 397 aa. Also similar to BP2804, 71.842% identity in 380 aa overlap.
NP_881088.1	Previously sequenced Bordetella pertussis AlcR the regulator of alcaligin siderophore biosynthesis TR:O52066 (EMBL:AF018255) (324 aa) fasta scores: E(): 3.4e-130, 100% id in 324 aa
NP_881089.1	Previously sequenced in Bordetella bronchiseptica Bcr protein TR:O52835 (EMBL:AJ000061) (110 aa) fasta scores: E(): 4.8e-35, 96.36% id in 110 aa. Note the differing C-termini. Also similar to Escherichia coli bicyclomycin resistance protein Bcr or BicR or BicR or Sur or SuxA or b2182 SW:BCR_ECOLI (P28246) (396 aa) fasta scores: E(): 1.1e-25, 29.41% id in 391 aa
NP_881090.1	Previously sequenced Bordetella pertussis ferric alcaligin siderophore receptor FauA TR:Q9X6A5 (EMBL:AF135154) (734 aa) fasta scores: E(): 0, 100% id in 734 aa
NP_881091.1	Similar to many proteins involved in multiple antibiotic resistance including: Salmonella typhimurium multiple antibiotic resistance protein MarC SW:MARC_SALTY (Q56068) (221 aa) fasta scores: E(): 6.2e-17, 29.68% id in 219 aa and to Escherichia coli multiple antibiotic resistance protein MarC SW:MARC_ECOLI (P31123) (221 aa) fasta scores: E(): 1.5e-16, 30.18% id in 222 aa. Previously sequenced as Bordetella pertussis  multiple antibiotic resistance protein Mar TR:Q9X6A6 (EMBL:AF135154) (132 aa) fasta scores: E(): 1.2e-36, 100% id in 111 aa. Note the differing N-termini with the previously reported Bordetella protein.
NP_881092.1	Database similarities to the predicted product o fthis CDS covers a region defined by the PFAM motif PF00990, GGDEF domain, the function of which is unknown. Similar in parts to several regulators including: Rhizobium meliloti  response regulator sma2301 TR:AAK65897 (EMBL:AE007308) (448 aa) fasta scores: E(): 1e-16, 42.16% id in 185 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1107 pa1107 TR:Q9I4M8 (EMBL:AE004541) (398 aa) fasta scores: E(): 1.1e-16, 38.91% id in 185 aa
NP_881093.1	No siginificant database matches
NP_881094.1	Weakly similar to Xylella fastidiosa phage-related protein Xf0485 TR:Q9PG17 (EMBL:AE003898) (181 aa) fasta scores: E(): 3e-06, 29.18% id in 185 aa
NP_881095.1	Previously sequenced Bordetella pertussis virulence related protein, Vrg-6 TR:Q45395 (EMBL:M77374) (105 aa) fasta scores: E(): 4.2e-36, 100% id in 105 aa
NP_881096.1	no significant database hits
NP_881097.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_881098.1	Similar to Burkholderia solanacearum conserved hypothetical protein Rsc2338 TR:CAD16045 (EMBL:AL646069) (449 aa) fasta scores: E(): 1e-98, 67.92% id in 452 aa, and to Salmonella enterica subspenterica serovar Typhi conserved hypothetical protein Sty0960 TR:CAD05362 (EMBL:AL627268) (447 aa) fasta scores: E(): 8.5e-76, 54.34% id in 449 aa
NP_881099.1	participates with LolB in the incorporation of lipoprotein into the outer membrane
NP_881100.1	Similar to many including: Burkholderia solanacearum probable cell division transmembrane protein FtsK TR:CAD16048 (EMBL:AL646069) (781 aa) fasta scores: E(): 1.1e-166, 66.62% id in 785 aa, and to Coxiella burnetii cell division protein FtsK SW:FTSK_COXBU (P39920) (778 aa) fasta scores: E(): 3.8e-125, 47.78% id in 766 aa. Also similar to the C-terminal of Escherichia coli cell division protein Ftsk or b0890 SW:FTSK_ECOLI (P46889) (1329 aa) fasta scores: E(): 5.4e-111, 60.81% id in 541 aa
NP_881101.1	Similar to Escherichia coli thioredoxin reductase TrxB or b0888 or z1232 or Ecs0973 SW:TRXB_ECOLI (P09625) (320 aa) fasta scores: E(): 1e-84, 71.65% id in 314 aa, and to Vibrio cholerae thioredoxin reductase Vc1182 TR:Q9KSS4 (EMBL:AE004198) (318 aa) fasta scores: E(): 1.9e-90, 73.04% id in 319 aa
NP_881102.1	Similar to several including: Xylella fastidiosa hypothetical protein Xf1295 TR:Q9PDT4 (EMBL:AE003963) (180 aa) fasta scores: E(): 1.4e-10, 37.85% id in 177 aa and to Neisseria meningitidis hypothetical protein Nma1237 TR:Q9JUM1 (EMBL:AL162755) (201 aa) fasta scores: E(): 5.3e-08, 31.6% id in 212 aa
NP_881103.1	Similar to Escherichia coli quaternary ammonium compound-resistance protein QacE SW:QACE_ECOLI (Q57225) (110 aa) fasta scores: E(): 1.4e-20, 58.18% id in 110 aa and to Pseudomonas aeruginosa GacE2 protein TR:Q9ZEH0 (EMBL:AJ223604) (110 aa) fasta scores: E(): 3.3e-21, 57.27% id in 110 aa
NP_881104.1	transposase for IS481 element
NP_881105.1	Similar to Aquifex aeolicus Na Ssf or aq_2106 TR:O67873 (EMBL:AE000773) (487 aa) fasta scores: E(): 2e-25, 38.81% id in 572 aa and to Escherichia coli symporter YjcG or b4067 SW:YJCG_ECOLI (P32705) (549 aa) fasta scores: E(): 1.1e-13, 24.57% id in 639 aa
NP_881106.1	no significant database hits
NP_881107.1	catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions
NP_881108.1	Similar to Escherichia coli potassium-transporting ATPase B chain KdpB or b0697 SW:ATKB_ECOLI (P03960) (682 aa) fasta scores: E(): 5.4e-136, 66.71% id in 694 aa, and to Escherichia coli O157:H7 high-affinity potassium-transporting ATPase B chain Ecs0725 TR:BAB34148 (EMBL:AP002552) (682 aa) fasta scores: E(): 6.2e-136, 66.57% id in 694 aa
NP_881109.1	One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex
NP_881110.1	Similar to Escherichia coli sensor protein KdpD or b0695 SW:KDPD_ECOLI (P21865) (894 aa) fasta scores: E(): 1.2e-68, 46.35% id in 863 aa and to Burkholderia solanacearum probable two-component sensor kinase KdpD transcription regulator protein TR:CAD16882 (EMBL:AL646075) (937 aa) fasta scores: E(): 1.6e-84, 58.87% id in 885 aa
NP_881111.1	Similar to Escherichia coli Kdp operon (involved in potassium transport) transcriptional regulatory protein KdpE or b0694 SW:KDPE_ECOLI (P21866) (225 aa) fasta scores: E(): 2.9e-54, 63.8% id in 221 aa and to Escherichia coli O157:H7 EDL933 regulator of Kdp operon KdpE TR:AAG55015 (EMBL:AE005247) (225 aa) fasta scores: E(): 4.5e-54, 63.34% id in 221 aa
NP_881112.1	transposase for IS481 element
NP_881113.1	weakly similar to Haemophilus influenzae hypothetical protein Hi0874 SW:Y874_HAEIN (P44067) (399 aa) fasta scores: E(): 1.4e-09, 22.42% id in 223 aa
NP_881114.1	Weakly similar to Aquifex aeolicus hypothetical 30.0 kDa protein Aq_362 TR:O66687 (EMBL:AE000686) (265 aa) fasta scores: E(): 1.1e-05, 29.38% id in 211 aa
NP_881115.1	Converts isocitrate to alpha ketoglutarate
NP_881116.1	Similar to Neisseria meningitidis hypothetical protein Nma1720 TR:Q9JTL8 (EMBL:AL162756) (156 aa) fasta scores: E(): 5.3e-17, 40.58% id in 138 aa
NP_881117.1	Similar in parts to many cytochromes including: to Vibrio cholerae cytochrome C554 Vc2241 TR:Q9KPX1 (EMBL:AE004296) (107 aa) fasta scores: E(): 4.7e-06, 41.07% id in 112 aa and to Pseudomonas stutzeri cytochrome C4 precursor Cc4 SW:CYC4_PSEST (Q52369) (210 aa) fasta scores: E(): 2.2e-05, 32.71% id in 107 aa
NP_881118.1	Similar in parts to many cytochromes including: Burkholderia solanacearum  periplasmic cytochrome type-C oxidoreductase Srsc0999 TR:CAD14701 (EMBL:AL646062) (115 aa) fasta scores: E(): 3.2e-21, 64.7% id in 102 aa and to Paracoccus sp cytochrome C-554 SW:C554_PARSP (P00105) (83 aa) fasta scores: E(): 3.8e-07, 41.66% id in 84 aa
NP_881119.1	transposase for IS481 element
NP_881120.1	Similar to many including: Burkholderia solanacearum conserved hypothetical protein Rsc0998 TR:CAD14700 (EMBL:AL646062) (290 aa) fasta scores: E(): 1.9e-79, 76.4% id in 284 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2707 TR:Q9I0D5 (EMBL:AE004698) (281 aa) fasta scores: E(): 7.7e-74, 71.42% id in 280 aa
NP_881121.1	highly similar to several including: Rhizobium loti Mlr3961 protein TR:Q98F34 (EMBL:AP003003) (396 aa) fasta scores: E(): 8.7e-89, 57.97% id in 395 aa and to Pseudomonas aeruginosa hypothetical protein Pa2705 TR:Q9I0D7 (EMBL:AE004698) (393 aa) fasta scores: E(): 2.7e-88, 55.58% id in 394 aa
NP_881122.1	Similar to Staphylococcus aureus (strain N315) protein Sa2317 or Sav2529 TR:BAB58691 (EMBL:AP003137) (163 aa) fasta scores: E(): 1.3e-29, 47.53% id in 162 aa, Escherichia coli O157:H7  resistance protein Ecs2052 TR:BAB35475 (EMBL:AP002557) (172 aa) fasta scores: E(): 3.3e-23, 45.28% id in 159 aa and to Rhizobium meliloti acetyltransferase Smc01229 TR:CAC46141 (EMBL:AL591787) (169 aa) fasta scores: E(): 2.4e-22, 43.13% id in 153 aa
NP_881123.1	no significant database hits
NP_881124.1	Similar to many proposed proteases including: Deinococcus radiodurans protease DR1598 TR:Q9RTZ9 (EMBL:AE002003) (951 aa) fasta scores: E(): 4.7e-130, 42.77% id in 886 aa and to Rhodothermus sp protease PrT TR:Q9ZIG1 (EMBL:AF028721) (300 aa) fasta scores: E(): 1.5e-28, 42.24% id in 258 aa
NP_881125.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
NP_881126.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
NP_881127.1	Weakly similar to several thioredoxins including: Rhodospirillum rubrum thioredoxin TrxA SW:THIO_RHORU (P10473) (104 aa) fasta scores: E(): 0.073, 27.000% id in 100 aa
NP_881128.1	with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor
NP_881129.1	no significant database hits
NP_881130.1	protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic
NP_881131.1	Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
NP_881132.1	catalyzes the phosphorylation of NAD to NADP
NP_881133.1	Similar to Escherichia coli DNA repair protein RecN or b2616 SW:RECN_ECOLI (P05824) (553 aa) fasta scores: E(): 5.7e-66, 42.754% id in 552 aa
NP_881134.1	Previously sequenced Bordetella pertussis ferric ion uptake regulator Fur TR:Q9S6N2 (EMBL:AJ238308) (104 aa) fasta scores: E(): 2e-38, 100.000% id in 104 aa
NP_881135.1	Previously sequenced as Bordetella pertussis  outer membrane lipoprotein OmlA TR:Q9X6Z0 (EMBL:AJ238308) (182 aa) fasta scores: E(): 1.1e-69, 100.000% id in 182 aa. Also similar to Burkholderia pseudomallei outer membrane lipoprotein OmlA TR:Q9F9X1 (EMBL:AF153356) (133 aa) fasta scores: E(): 5.8e-12, 43.860% id in 114 aa
NP_881136.1	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis
NP_881137.1	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis
NP_881138.1	Similar to several including: Caulobacter crescentus hydrolase, alpha/beta hydrolase fold family CC2797 TR:Q9A4N3 (EMBL:AE005945) (269 aa) fasta scores: E(): 1.9e-15, 28.782% id in 271 aa
NP_881139.1	Similar to several e.g. Bacillus subtilis hypothetical 47.8 kDa protein YxeQ or lp9I SW:YXEQ_BACSU (P54956) (445 aa) fasta scores: E(): 3.8e-31, 30.588% id in 425 aa
NP_881140.1	Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.2e-42, 38.889% id in 324 aa
NP_881141.1	Similar to several including Corynebacterium sp formyltetrahydrofolate deformylase PurU SW:PURU_CORSP (Q46339) (286 aa) fasta scores: E(): 9.7e-50, 46.809% id in 282 aa
NP_881142.1	Weakly similar to Rhizobium loti sarcosine oxidase gamma subunit Mlr1276 TR:Q98KX5 (EMBL:AP002997) (195 aa) fasta scores: E(): 0.0011, 27.273% id in 187 aa
NP_881143.1	Similar to Rhizobium meliloti sarcosine oxidase alpha subunit SoxA or r00083 or smc02606 SW:SOXA_RHIME (O87386) (987 aa) fasta scores: E(): 5.8e-146, 46.479% id in 994 aa
NP_881144.1	Similar to Rhizobium meliloti sarcosine oxidase delta subunit SoxD or r00084 or smc02607 SW:SOXD_RHIME (O87387) (92 aa) fasta scores: E(): 4.4e-14, 52.113% id in 71 aa
NP_881145.1	Similar to Rhizobium meliloti sarcosine oxidase beta subunit SoxB or r00085 or smc02608 SW:SAOX_RHIME (O87388) (416 aa) fasta scores: E(): 7.9e-109, 64.269% id in 417 aa
NP_881146.1	Similar to many  and proven dipeptidases from Prokaryotes and Eukaryotes e.g Rhizobium meliloti dipeptidase Smc03264 TR:CAC47695 (EMBL:AL591792) (336 aa) fasta scores: E(): 7.1e-25, 27.976% id in 336 aa and Mus musculus microsomal dipeptidase precursor Dpep1 SW:MDP1_MOUSE (P31428) (410 aa) fasta scores: E(): 1.5e-15, 30.943% id in 265 aa. Note codon 13 offers an alternative translational start site.
NP_881147.1	Similar to many members of the LysR-family of regulatory proteins including: Mycobacterium marinum probable hydrogen peroxide-inducible genes activator OxyR SW:OXYR_MYCMR (O87324) (311 aa) fasta scores: E(): 2.3e-13, 27.899% id in 276 aa and Acinetobacter lwoffii probable cat1 operon transcriptional activator CatR SW:CATR_ACILW (O33945) (303 aa) fasta scores: E(): 3.7e-12, 26.101% id in 318 aa
NP_881148.1	Weakly similar to several including: Methanothermus fervidus malate dehydrogenase Mdh SW:MDH_METFE (P16142) (339 aa) fasta scores: E(): 7e-27, 31.212% id in 330 aa
NP_881149.1	Similar to Bacillus subtilis FolD bifunctional protein [includes: methylenetetrahydrofolate dehydrogenase and Methenyltetrahydrofolate cyclohydrolase] FolD SW:FOLD_BACSU (P54382) (283 aa) fasta scores: E(): 5.5e-51, 50.890% id in 281 aa and Haemophilus influenzae FolD bifunctional protein [includes: methylenetetrahydrofolate dehydrogenase SW:FOLD_HAEIN (P44313) (281 aa) fasta scores: E(): 2.6e-50, 53.571% id in 280 aa. Also highly similar to BP0990, 76.241% identity in 282 aa overlap.
NP_881150.1	Similar to several proteins of undefined function e.g. Comamonas testosteroni Orf4 protein TR:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 4.5e-28, 31.975% id in 319 aa
NP_881151.1	transposase for IS481 element
NP_881153.1	Similar to many proteins associated with secretion and pilus assembly e.g.Pseudomonas aeruginosa fimbrial assembly protein PilQ pa5040 SW:PILQ_PSEAE (P34750) (714 aa) fasta scores: E(): 2.5e-12, 27.110% id in 391 aa, Rhizobium loti probable secretory protein mll0899 TR:Q98LS6 (EMBL:AP002996) (461 aa) fasta scores: E(): 1e-21, 27.845% id in 413 aa and Rhizobium loti pilus assembly protein Mll6479 TR:Q989D0 (EMBL:AP003009) (481 aa) fasta scores: E(): 1.1e-16, 27.660% id in 423 aa. Note codon 18 may offer an alternative translational start site.
NP_881154.1	Weakly similar to several e.g. Rhizobium meliloti pilus assembly signal peptide protein TR:CAC41527 (EMBL:AL591782) (269 aa) fasta scores: E(): 0.014, 24.545% id in 220 aa
NP_881155.1	no significant database hits
NP_881156.1	no significant database hits
NP_881157.1	Similar to the N-terminus of Xylella fastidiosa fimbrial protein xf2542 TR:Q9PAH6 (EMBL:AE004061) (148 aa) fasta scores: E(): 0.68, 36.364% id in 77 aa
NP_881158.1	Similar to Escherichia coli bacteriolytic toxin entericidin B precursor EcnB or B4147.2 SW:ECNB_ECOLI (P56549) (48 aa) fasta scores: E(): 0.0016, 44.444% id in 45 aa and Citrobacter freundii entericidin B precursor EcnB SW:ECNB_CITFR (P56550) (48 aa) fasta scores: E(): 0.0064, 42.222% id in 45 aa. Note in E. coli ecnB is located next to the anti-toxin ecnA. This is not the situation in B. pertusis. However, B. pertusis possess two possible ecnA paralogues BP0527 and BP2565.
NP_881159.1	Similar to many proteins of unproven function including: Escherichia coli O157:H7  isomerase Ecs3029 TR:BAB36452 (EMBL:AP002560) (233 aa) fasta scores: E(): 1.5e-60, 63.755% id in 229 aa and Caulobacter crescentus fumarylacetoacetate hydrolase family protein cc3567 TR:Q9A2J4 (EMBL:AE006015) (226 aa) fasta scores: E(): 9.1e-47, 54.911% id in 224 aa
NP_881160.1	Highly similar to Escherichia coli inorganic pyrophosphatase Ppa or B4226 SW:IPYR_ECOLI (P17288) (175 aa) fasta scores: E(): 1.1e-42, 65.341% id in 176 aa
NP_881161.1	Weakly similar to several including: Escherichia coli HemY protein involved in porphyrin biosynthesis SW:HEMY_ECOLI (P09128) (398 aa) fasta scores: E(): 2.6e-09, 24.165% id in 389 aa and Pseudomonas aeruginosa hypothetical protein Pa5257 TR:Q9HTT8 (EMBL:AE004938) (412 aa) fasta scores: E(): 6.1e-14, 29.882% id in 425 aa
NP_881162.1	no significant database hits
NP_881163.1	Similar to several invloved in porphyrin biosynthesis including: Salmonella typhimurium uroporphyrinogen-III synthase HemD or Stmd1.54 SW:HEM4_SALTY (Q9L6Q3) (246 aa) fasta scores: E(): 2.2e-06, 27.755% id in 245 aa and Escherichia coli uroporphyrinogen-III synthase HemD or b3804 SW:HEM4_ECOLI (P09126) (246 aa) fasta scores: E(): 5.9e-06, 27.236% id in 246 aa
NP_881164.1	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis
NP_881165.1	Similar to several e.g. Pseudomonas aeruginosa hypothetical protein Pa1170 TR:Q9I4G7 (EMBL:AE004547) (244 aa) fasta scores: E(): 6.1e-43, 52.790% id in 233 aa. Also similar to BP1646 (69.456% identity in 239 aa), and to BP2539 (46.222% identity in 225 aa)
NP_881166.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa1170 pa1170 TR:Q9I4G7 (EMBL:AE004547) (244 aa) fasta scores: E(): 1.1e-34, 51.092% id in 229 aa. Also similar to BP2538 (46.222% identity in 225 aa), and to BP1646 45.982% identity in 239 aa.
NP_881167.1	Catalyzes the only substrate-level phosphorylation in the TCA cycle
NP_881168.1	catalyzes the interconversion of succinyl-CoA and succinate
NP_881169.1	Similar to Ralstonia solanacearum hypothetical protein Rsc0553 or Rs04912 SWALL:Q8Y1Y4 (EMBL:AL646059) (208 aa) fasta scores: E(): 1.3e-24, 48.14% id in 189 aa
NP_881170.1	catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine
NP_881171.1	Similar to Pseudomonas putida transcriptional activator MetR TR:Q9AF88 (EMBL:AF363278) (309 aa) fasta scores: E(): 4e-71, 56.863% id in 306 aa, and to Escherichia coli, and transcriptional activator protein MetR SW:METR_ECOLI (P19797) (317 aa) fasta scores: E(): 2.4e-46, 43.607% id in 305 aa
NP_881172.1	binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities
NP_881173.1	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs
NP_881174.1	Similar to many regulatory proteins including: Salmonella typhimurium transcriptional regulatory protein TctD SW:TCTD_SALTY (P22104) (224 aa) fasta scores: E(): 1.8e-36, 50.000% id in 220 aa and Pseudomonas aeruginosa probable two-component response regulator Pa0756 TR:Q9I5H3 (EMBL:AE004510) (223 aa) fasta scores: E(): 2.1e-40, 53.812% id in 223 aa.
NP_881175.1	Similar to several two-component system, histidine kinases e.g. Rhizobium loti Mll7952 TR:Q984L4 (EMBL:AP003013) (452 aa) fasta scores: E(): 1.3e-44, 37.360% id in 447 aa and Salmonella typhi TctE TR:O68289 (EMBL:AF029846) (439 aa) fasta scores: E(): 1.2e-29, 32.576% id in 396 aa
NP_881176.1	Similar to several e.g. Caulobacter crescentus major facilitator family transporter protein Cc0980 TR:Q9A9K0 (EMBL:AE005775) (567 aa) fasta scores: E(): 2.3e-144, 67.956% id in 543 aa
NP_881177.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_881178.1	Similar to many including: Pseudomonas aeruginosa probable ATP-binding component of ABC transporter Pa0603 TR:Q9I5T5 (EMBL:AE004496) (369 aa) fasta scores: E(): 1.5e-46, 46.006% id in 363 aa and Escherichia coli O157:H7 EDL933  ATP-binding component of a transport system AfuC TR:AAG54709 (EMBL:AE005215) (352 aa) fasta scores: E(): 2.8e-40, 39.589% id in 341 aa
NP_881179.1	Similar to many e.g. Rhizobium loti ABC transport system permease Mll3625 TR:Q98FT7 (EMBL:AP003002) (567 aa) fasta scores: E(): 4e-31, 26.964% id in 560 aa and Streptomyces coelicolor  membrane protein Sc10a5.29C TR:O54120 (EMBL:AL021529) (589 aa) fasta scores: E(): 1.4e-40, 32.192% id in 584 aa, and to
NP_881180.1	Weakly similar to several e.g. Rhizobium loti ABC transporter periplasmic substrate-binding protein Mll3626 TR:Q98FT6 (EMBL:AP003002) (328 aa) fasta scores: E(): 3.6e-12, 27.306% id in 271 aa
NP_881181.1	Similar to Escherichia coli 3-oxoacyl-[acyl-carrier protein] reductase FabG or B1093 SW:FABG_ECOLI (P25716) (244 aa) fasta scores: E(): 3.5e-29, 41.597% id in 238 aa
NP_881182.1	Similarover the whole range to proteins of unproven function e.g. Archaeoglobus fulgidus MaoC protein af2313 TR:O27971 (EMBL:AE000944) (151 aa) fasta scores: E(): 1.3e-13, 40.000% id in 130 aa. Similar to the the very C-terminus of Escherichia coli phenylacetic acid degradation protein MaoC SW:MAOC_ECOLI (P77455) (681 aa) fasta scores: E(): 1.6e-08, 35.821% id in 134 aa
NP_881183.1	Weakly similar to many proteins of undefined function e.g. Thermoplasma acidophilum hypothetical protein Ta1457 ta1457 TR:Q9HI85 (EMBL:AL445067) (135 aa) fasta scores: E(): 0.018, 25.210% id in 119 aa
NP_881184.1	Similar to many e.g. Pseudomonas aeruginosa hypothetical protein Pa1016 TR:Q9I4V7 (EMBL:AE004534) (383 aa) fasta scores: E(): 2.6e-46, 43.669% id in 387 aa
NP_881185.1	Similar to many e.g. Escherichia coli, and glycine cleavage system transcriptional activator GcvA or B2808 or Z4125 or Ecs3668 SW:GCVA_ECOLI (P32064) (305 aa) fasta scores: E(): 1.3e-22, 30.208% id in 288 aa
NP_881186.1	Similar to many e.g. Escherichia coli hypothetical protein YfdE or B2371 SW:YFDE_ECOLI (P76518) (381 aa) fasta scores: E(): 5.3e-53, 37.333% id in 375 aa
NP_881187.1	no significant database hits
NP_881188.1	Required for efficient pilin antigenic variation
NP_881189.1	catalyzes the conversion of carbamoyl phosphate and aspartate to form N-carbamoyl aspartate
NP_881191.1	no significant database hits
NP_881192.1	Similar to many including: Escherichia coli anti-toxin entericidin A precursor EcnaA or B4147.1 SW:ECNA_ECOLI (P56548) (41 aa) fasta scores: E(): 0.29, 44.737% id in 38 aa, Rhizobium meliloti  entericidin b signal peptide protein TR:CAC46557 (EMBL:AL591789) (52 aa) fasta scores: E(): 0.035, 48.837% id in 43 aa and Rickettsia conorii hypothetical 6.7 kDa protein Rc1154 TR:AAL03692 (EMBL:AE008664) (64 aa) fasta scores: E(): 0.004, 38.095% id in 42 aa. Note in E. coli ecnA is located next to the bacteriolytic toxin ecnB. This is not the situation in B. pertusis. However, B. pertusis does possess an ecnB orthologue BP2531. B. pertusis also carries a second possible ecnA paralogue, BP0527.
NP_881193.1	Similar to many nucleases e.g. Escherichia coli O157:H7 EDL933 DNA-specific endonuclease I EndA TR:AAG58076 (EMBL:AE005525) (235 aa) fasta scores: E(): 2.4e-39, 47.154% id in 246 aa
NP_881194.1	no significant database hits
NP_881195.1	transposase for IS481 element
NP_881197.1	no significant database hits
NP_881198.1	Similar to in regions to possible DNA-binding domains of several proteins of undefined function e.g. Xylella fastidiosa hypothetical protein Xf0744 xf0744 TR:Q9PFD4 (EMBL:AE003916) (120 aa) fasta scores: E(): 3.5e-22, 66.667% id in 108 aa
NP_881199.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
NP_881200.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily
NP_881201.2	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
NP_881202.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
NP_881203.1	Similar to Pseudomonas syringae 50s ribosomal protein l35 RpmI SW:RL35_PSESY (P52830) (64 aa) fasta scores: E(): 1.9e-10, 58.065% id in 62 aa and to Neisseria meningitidis (serogroup A)  50s ribosomal protein l35 RpmI or Nma0931 TR:Q9JQN7 (EMBL:AL162754) (65 aa) fasta scores: E(): 1.6e-16, 69.231% id in 65 aa
NP_881204.1	transposase for IS481 element
NP_881205.1	catalyzes the formation of dUMP from dUTP
NP_881206.1	transposase for IS481 element
NP_881207.1	Similar to several including: Pseudomonas aeruginosa probable transcriptional regulator Pa2897 TR:Q9HZV0 (EMBL:AE004716) (479 aa) fasta scores: E(): 1e-58, 37.844% id in 473 aa and Escherichia coli O157:H7 regulator Ecs5302 TR:BAB38725 (EMBL:AP002569) (470 aa) fasta scores: E(): 2.4e-53, 35.106% id in 470 aa
NP_881208.1	no significant database hits
NP_881209.1	transposase for IS481 element
NP_881210.1	no significant database hits
NP_881211.1	Similar to several members of the DedA-family of membrane proteins e.g. Caulobacter crescentus deda family protein Cc1701 TR:Q9A7M1 (EMBL:AE005844) (205 aa) fasta scores: E(): 2.9e-18, 34.135% id in 208 aa
NP_881212.1	Similar to several including: Pasteurella multocida hypothetical protein Pm0419 TR:Q9CNK9 (EMBL:AE006078) (345 aa) fasta scores: E(): 1.3e-69, 51.604% id in 343 aa, and to Escherichia coli hypothetical protein YbcI or B0527 SW:YBCI_ECOLI (P45570) (173 aa) fasta scores: E(): 0.0012, 31.579% id in 152 aa
NP_881213.1	transposase for IS481 element
NP_881214.1	no significant database hits
NP_881215.1	Similar to many  regulatory proteins e.g. Streptomyces coelicolor  LacI-family transcriptional regulator Sce65.21C TR:Q9RKF2 (EMBL:AL133236) (349 aa) fasta scores: E(): 7.7e-30, 34.746% id in 354 aa
NP_881216.1	Similar to many ABC transport proteins e.g. Mycobacterium tuberculosis CDC1551 peptide ABC transporter ATP-binding protein,  Mt3764 TR:AAK48128 (EMBL:AE007174) (548 aa) fasta scores: E(): 5.1e-72, 47.689% id in 541 aa
NP_881217.1	Similar to several ABC-transporter proteins including: Rhizobium loti ABC transporter permease Mlr5418 TR:Q98BU9 (EMBL:AP003006) (303 aa) fasta scores: E(): 1.8e-41, 43.396% id in 265 aa and to Escherichia coli dipeptide transport system permease DppC or Ecs4422 SW:DPPC_ECOLI (P37315) (300 aa) fasta scores: E(): 4.5e-38, 41.791% id in 268 aa
NP_881218.1	Similar to several including: Rhizobium sp probable peptide ABC transporter permease Y4tP SW:Y4TP_RHISN (Q53191) (313 aa) fasta scores: E(): 8.8e-43, 39.936% id in 313 aa and Agrobacterium radiobacter MoaB protein TR:O50268 (EMBL:AF242881) (313 aa) fasta scores: E(): 1.8e-39, 41.066% id in 319 aa
NP_881219.1	Similar to several including: Rhizobium loti ABC transporter substrate-binding protein Mll7247 TR:Q986Q9 (EMBL:AP003011) (505 aa) fasta scores: E(): 9.2e-37, 29.741% id in 501 aa and Escherichia coli  ABC transporter periplasmic binding protein YddS precursor B1487 SW:YDDS_ECOLI (P76128) (516 aa) fasta scores: E(): 1.8e-29, 28.516% id in 512 aa
NP_881220.1	Similar to Rhizobium meliloti hypothetical protein Smb21005 TR:CAC49531 (EMBL:AL603646) (155 aa) fasta scores: E(): 8.5e-38, 68.590% id in 156 aa
NP_881221.1	Similar to several proteins of undefined function e.g. Rhizobium loti Mlr6177 protein TR:Q98A30 (EMBL:AP003008) (216 aa) fasta scores: E(): 7.8e-32, 52.427% id in 206 aa
NP_881222.1	Similar to several including: Pseudomonas aeruginosa hypothetical protein Pa4182 TR:Q9HWJ9 (EMBL:AE004834) (212 aa) fasta scores: E(): 8.9e-50, 61.576% id in 203 aa and Rhizobium loti transcriptional regulator mll0013 TR:Q98NS0 (EMBL:AP002994) (216 aa) fasta scores: E(): 7.7e-32, 42.512% id in 207 aa
NP_881223.1	Similar to several  e.g. regulators Rhizobium loti transcriptional regulator Mlr6174 TR:Q98A34 (EMBL:AP003008) (489 aa) fasta scores: E(): 2.2e-79, 52.218% id in 496 aa and Rhizobium meliloti probable rhizopine catabolism regulatory protein MocR SW:MOCR_RHIME (P49309) (493 aa) fasta scores: E(): 5.7e-46, 37.657% id in 478 aa
NP_881224.1	Similar to several including: Rhizobium loti Mlr8412 protein TR:Q983A8 (EMBL:AP003014) (405 aa) fasta scores: E(): 2.7e-60, 47.594% id in 374 aa and Rhizobium meliloti  transport transmembrane protein Smc01779 TR:CAC45796 (EMBL:AL591786) (408 aa) fasta scores: E(): 1.7e-50, 39.216% id in 408 aa. Also similar to BP0980, 49.746% identity in 394 aa overlap.
NP_881225.1	Similar to Bacillus stearothermophilus alcohol dehydrogenase SW:ADH3_BACST (P42328) (339 aa) fasta scores: E(): 2.9e-34, 37.615% id in 327 aa
NP_881226.1	Similar to Rhizobium loti Mll3668 hypothetical protein TR:Q98FQ2 (EMBL:AP003002) (436 aa) fasta scores: E(): 1.8e-10, 30.820% id in 451 aa
NP_881227.1	no significant database hits
NP_881228.1	Similar to several proposed regulatory proteins Rhizobium loti glycine cleavage system transcription activator Mlr1973 TR:Q98JE9 (EMBL:AP002998) (303 aa) fasta scores: E(): 2.8e-37, 42.857% id in 280 aa
NP_881229.1	Similar to several proposed regulatory proteins including: Pseudomonas aeruginosa probable transcriptional regulator Pa3782 TR:Q9HXL3 (EMBL:AE004797) (317 aa) fasta scores: E(): 2.8e-63, 53.968% id in 315 aa and Streptomyces coelicolor Arac-family transcriptional regulator AdpA TR:Q9L062 (EMBL:AL163641) (398 aa) fasta scores: E(): 4.4e-54, 47.097% id in 310 aa
NP_881230.1	Similar in parts to several e.g. Escherichia coli O157:H7 hypothetical 29.1 kDa protein Ecs0400 TR:BAB33823 (EMBL:AP002551) (262 aa) fasta scores: E(): 4.7e-49, 51.331% id in 263 aa
NP_881231.1	Similar to several membrane proteins including: Campylobacter jejuni  integral membrane protein Cj0557C TR:Q9PHV8 (EMBL:AL139075) (361 aa) fasta scores: E(): 1.9e-09, 23.193% id in 332 aa and Streptomyces coelicolor integral membrane protein Scg4.15C TR:Q9K3P9 (EMBL:AL360034) (577 aa) fasta scores: E(): 1.1e-07, 35.938% id in 192 aa
NP_881232.1	transposase for IS481 element
NP_881233.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3614 pa3614 TR:Q9HY12 (EMBL:AE004781) (467 aa) fasta scores: E(): 2.7e-43, 40.870% id in 460 aa
NP_881234.1	Similar to many proposed s including : Pseudomonas aeruginosa Pa1647 TR:Q9I378 (EMBL:AE004592) (573 aa) fasta scores: E(): 1.2e-71, 40.146% id in 548 aa and Mycobacterium tuberculosis CDC1551 Mt1781 TR:AAK46054 (EMBL:AE007038) (560 aa) fasta scores: E(): 4.2e-69, 37.613% id in 553 aa
NP_881235.1	Weakly similar to Archaeoglobus fulgidus hypothetical protein Af0055 af0055 SW:Y055_ARCFU (O30181) (132 aa) fasta scores: E(): 3.1e-09, 33.898% id in 118 aa, and to Pyrococcus abyssi hypothetical 13.6 kDa protein pab1062 TR:Q9UY93 (EMBL:AJ248288) (130 aa) fasta scores: E(): 4.1e-09, 31.667% id in 120 aa
NP_881236.1	Similar to several e.g. Rhizobium loti Mll1737 protein Mll1737 TR:Q98JX4 (EMBL:AP002998) (416 aa) fasta scores: E(): 3.9e-32, 29.496% id in 417 aa
NP_881237.1	Similar to many ABC transport proteins including: Streptomyces coelicolor  ABC transporter membrane component Sc8g12.20 TR:Q9KYY5 (EMBL:AL355753) (267 aa) fasta scores: E(): 2.4e-26, 34.426% id in 244 aa and Rhizobium loti taurine transport system permease Mlr4519 TR:Q98DW5 (EMBL:AP003004) (286 aa) fasta scores: E(): 1.6e-25, 33.955% id in 268 aa
NP_881238.1	Similar to many ABC transport proteins including: Clostridium acetobutylicum ABC-type sulfate transporter ATPase component cac0107 TR:Q97MT4 (EMBL:AE007523) (279 aa) fasta scores: E(): 1.3e-35, 47.598% id in 229 aa
NP_881239.1	Similar to many ABC transport proteins e.g. Escherichia coli taurine-binding periplasmic protein precursor taua or ssia or b0365 SW:TAUA_ECOLI (Q47537) (320 aa) fasta scores: E(): 4e-10, 25.081% id in 307 aa
NP_881240.1	Similar to many proteins of undefined function e.g. Deinococcus radiodurans conserved hypothetical protein Dr2540 TR:Q9RRF2 (EMBL:AE002083) (496 aa) fasta scores: E(): 4.2e-25, 32.037% id in 437 aa
NP_881242.1	Similar to many membrane efflux proteins including: Streptomyces avermitilis transmembrane efflux protein TR:BAB69223 (EMBL:AB070943) (489 aa) fasta scores: E(): 1.7e-55, 42.217% id in 469 aa and Streptomyces coelicolor transmembrane efflux protein Sce22.16C TR:Q9KYU6 (EMBL:AL355832) (505 aa) fasta scores: E(): 2e-52, 39.535% id in 473 aa
NP_881243.1	Similar to many proposed TetR-family transcriptional regulators including: Streptomyces coelicolor Sck13.32 TR:Q9AD73 (EMBL:AL512667) (200 aa) fasta scores: E(): 8.9e-17, 37.838% id in 185 aa, and to Rhizobium meliloti Smc04134 TR:CAC41505 (EMBL:AL591782) (225 aa) fasta scores: E(): 0.0011, 27.273% id in 165 aa
NP_881244.1	Similar to Escherichia coli protein HipA or b1507 SWALL:HIPA_ECOLI (SWALL:P23874) (440 aa) fasta scores: E(): 2.8e-54, 41.92% id in 427 aa, and to Ralstonia solanacearum  hipa transcription regulator protein hipa or rsc1446 or rs03861 SWALL:Q8XZF5 (EMBL:AL646064) (445 aa) fasta scores: E(): 7.9e-82, 51.03% id in 437 aa
NP_881245.1	Similar to Escherichia coli protein HipB or b1508 SWALL:HIPB_ECOLI (SWALL:P23873) (88 aa) fasta scores: E(): 0.22, 27.38% id in 84 aa, and to Ralstonia solanacearum transcription regulator protein rsc1447 or rs03860 SWALL:Q8XZF4 (EMBL:AL646064) (84 aa) fasta scores: E(): 1.7e-05, 41.97% id in 81 aa
NP_881246.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
NP_881247.1	Similar to Escherichia coli inosine-5'-monophosphate dehydrogenase GuaB B2508 or Z3772 or Ecs3370 SW:IMDH_ECOLI (P06981) (488 aa) fasta scores: E(): 2.5e-110, 63.711% id in 485 aa
NP_881248.1	Similar to several proteins of undefined function e.g. Pseudomonas aeruginosa hypothetical protein Pa3765 pa3765 TR:Q9HXN0 (EMBL:AE004795) (194 aa) fasta scores: E(): 8.6e-32, 55.026% id in 189 aa
NP_881249.1	transposase for IS481 element
NP_881250.1	Similar to several Prokaryotic and Eukaryotic proteins of undefined function e.g. Mycobacterium leprae hypothetical protein Ml1120 TR:Q9CC83 (EMBL:AL583920) (873 aa) fasta scores: E(): 7.6e-19, 28.02% id in 910 aa and Leishmania major hypothetical protein L6202.3 TR:Q9NKT9 (EMBL:AC005802) (2354 aa) fasta scores: E(): 1.5e-10, 31.59% id in 652 aa
NP_881251.1	Weakly similar to many hypothetical proteins and to several exonucleases including: Mycobacterium leprae hypothetical protein Ml1119 TR:Q9CC84 (EMBL:AL583920) (383 aa) fasta scores: E(): 2.7e-16, 31.49% id in 381 aa, and to Escherichia coli, and exonuclease SbcD or B0398 or Z0496 or Ecs0448 SW:SBCD_ECOLI (P13457) (400 aa) fasta scores: E(): 0.12, 28.13% id in 295 aa
NP_881252.1	Highly similar to many including: Escherichia coli leucine-responsive regulatory protein Lrp SW:LRP_ECOLI (P19494) (163 aa) fasta scores: E(): 7.2e-29, 53.28% id in 152 aa and Neisseria meningitidis leucine-responsive regulatory protein Nmb1650 TR:Q9JYC5 (EMBL:AE002515) (154 aa) fasta scores: E(): 3.7e-35, 60.39% id in 154 aa
NP_881253.1	weakly similar to many proteins of unknown function including: Neisseria meningitidis hypothetical protein Nmb0465 TR:Q9K0U6 (EMBL:AE002403) (233 aa) fasta scores: E(): 9.3e-06, 28.79% id in 191 aa and Rhizobium loti Mll0832 protein TR:Q98LX6 (EMBL:AP002995) (250 aa) fasta scores: E(): 0.00035, 25% id in 244 aa
NP_881254.1	no significant database hits
NP_881255.1	Highly similar to several Agrobacterium tumefaciens Agr_l_1912p agr_l_1912 TR:AAK89528 (EMBL:AE008295) (573 aa) fasta scores: E(): 9.6e-149, 63.73% id in 579 aa and to Rhizobium loti ABC transporter periplasmic substrate-binding protein Mll5302 TR:Q98C44 (EMBL:AP003006) (443 aa) fasta scores: E(): 6.2e-08, 25.73% id in 443 aa
NP_881256.1	Similar to Rhizobium loti hypothetical protein Msl0703 protein TR:Q98M71 (EMBL:AP002995) (97 aa) fasta scores: E(): 6.2e-10, 50% id in 78 aa
NP_881257.1	Similar to many  ABC transport proteins e.g. Rhizobium meliloti  transport system permease ABC transporter protein Smc02516 TR:CAC47598 (EMBL:AL591792) (274 aa) fasta scores: E(): 1.2e-79, 73.4% id in 267 aa
NP_881258.1	Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein Rsc3047 or Rs00488 SWALL:Q8XUY6 (EMBL:AL646073) (365 aa) fasta scores: E(): 9.2e-74, 61.74% id in 366 aa.
NP_881259.1	Similar to many e.g. Pseudomonas aeruginosa glycerol-3-phosphate regulon repressor GlpR or Pa3583 SW:GLPR_PSEAE (Q51391) (251 aa) fasta scores: E(): 5e-48, 55.55% id in 252 aa
NP_881260.1	Similar to several Prokaryotic and Eukaryotic glycerol-3-phosphate dehydrogenases including: Deinococcus radiodurans glycerol-3-phosphate dehydrogenase Dr1019 TR:Q9RVK8 (EMBL:AE001953) (522 aa) fasta scores: E(): 6.5e-102, 55.51% id in 535 aa and to Caenorhabditis elegans probable glycerol-3-phosphate dehydrogenase, mitochondrial precursor T25g3.4 SW:GPDM_CAEEL (P90795) (722 aa) fasta scores: E(): 2e-58, 41.31% id in 547 aa
NP_881261.1	Similar to many IclR-family regulatory proteins including: Pectobacterium carotovorum subsp. carotovorum global regulatory protein, KdgR TR:Q9RB25 (EMBL:AF135395) (263 aa) fasta scores: E(): 2.6e-20, 33.6% id in 247 aa and Bacillus halodurans transcriptional regulator Bh2137 TR:Q9KAZ9 (EMBL:AP001514) (251 aa) fasta scores: E(): 7.6e-21, 29.04% id in 241 aa
NP_881262.1	Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.4e-29, 33.76% id in 308 aa and Comamonas testosteroni hypothetical protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 2.7e-27, 33.65% id in 312 aa
NP_881263.1	Similar to several including: Shewanella frigidimarina fumarate reductase flavoprotein subunit precursor SW:FRDA_SHEFR (Q02469) (596 aa) fasta scores: E(): 1.1e-21, 30.71% id in 459 aa and Salmonella typhi hypothetical protein R0146 TR:Q9L5J6 (EMBL:AF250878) (467 aa) fasta scores: E(): 8.5e-17, 28.86% id in 485 aa
NP_881264.1	Similar to several e.g. Mycobacterium tuberculosis CDC1551 conserved hypothetical protein mt3614 TR:AAK47972 (EMBL:AE007164) (278 aa) fasta scores: E(): 4e-17, 29.31% id in 290 aa
NP_881265.1	Similar to several e.g. Pseudomonas aeruginosa hypothetical protein Pa0339 pa0339 TR:Q9I6F4 (EMBL:AE004471) (251 aa) fasta scores: E(): 5.6e-44, 50% id in 254 aa
NP_881266.1	no significant database hits
NP_881267.1	Similar to many including: Burkholderia cepacia hypothetical 35.5 kDa protein TR:AAK81675 (EMBL:AF029344) (337 aa) fasta scores: E(): 3.1e-43, 42.63% id in 319 aa and Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 5.2e-43, 42.05% id in 321 aa
NP_881268.1	Similar to many e.g. Neisseria meningitidis dihydrodipicolinate synthase DapA or Nmb0929 SW:DAPA_NEIMB (Q9JZR4) (291 aa) fasta scores: E(): 3.8e-17, 27.57% id in 301 aa
NP_881269.1	Similar to several  IclR-family regulatory proteins e.g. Rhizobium loti transcription regulator Mll9009 TR:Q982L6 (EMBL:AP003015) (269 aa) fasta scores: E(): 3.2e-26, 37.55% id in 245 aa
NP_881270.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa0540 pa0540 TR:Q9I5Z6 (EMBL:AE004490) (128 aa) fasta scores: E(): 2.6e-12, 43.3% id in 127 aa and Neisseria meningitidis  membrane protein nma1176 TR:Q9JUR4 (EMBL:AL162755) (127 aa) fasta scores: E(): 3.7e-11, 42.5% id in 120 aa
NP_881271.1	Similar to Pasteurella multocida hypothetical protein Pm1879 TR:Q9CJW2 (EMBL:AE006225) (205 aa) fasta scores: E(): 1.4e-20, 40.51% id in 195 aa and Escherichia coli hypothetical 23.4 kDa protein in melb-fumb intergenic region YjdF or B4121 SW:YJDF_ECOLI (P39270) (209 aa) fasta scores: E(): 7.7e-18, 40.75% id in 211 aa
NP_881272.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa0868 pa0868 TR:Q9I573 (EMBL:AE004521) (137 aa) fasta scores: E(): 3.6e-25, 56.29% id in 135 aa. Also similar to a region in many peptide chain release factors e.g. Mycobacterium leprae peptide chain release factor 1 PrfA or Ml1134 SW:RF1_MYCLE (P45833) (361 aa) fasta scores: E(): 1.9, 29.91% id in 117 aa
NP_881273.1	Similar to many proteins of undefined function e.g. Caulobacter crescentus hypothetical protein Cc3159 cc3159 TR:Q9A3P3 (EMBL:AE005980) (210 aa) fasta scores: E(): 9.3e-59, 69.52% id in 210 aa
NP_881274.1	Similar to Neisseria meningitidis hypothetical protein Nma0704 nma0704 TR:Q9JVT6 (EMBL:AL162754) (140 aa) fasta scores: E(): 6.6e-14, 36.8% id in 144 aa. Also similar to several proposed tetrahydrobiopterin synthases e.g. Neisseria meningitidis 6-pyruvoyl tetrahydrobiopterin synthase,  nmb0527 TR:Q9K0Q7 (EMBL:AE002408) (140 aa) fasta scores: E(): 4.8e-14, 36.8% id in 144 aa
NP_881275.1	Similar to many including: Agrobacterium tumefaciens Agr_l_2908p agr_l_2908 TR:AAK90021 (EMBL:AE008345) (365 aa) fasta scores: E(): 1.4e-67, 49.58% id in 363 aa and to Rhizobium meliloti mannitol-binding periplasmic signal peptide protein Smc04251 TR:CAC46500 (EMBL:AL591788) (368 aa) fasta scores: E(): 1.7e-63, 47.26% id in 366 aa
NP_881276.1	Similar to several aldolases e.g.Pseudomonas aeruginosa probable aldolase Pa0224 TR:Q9I6R4 (EMBL:AE004460) (260 aa) fasta scores: E(): 3.9e-55, 53.57% id in 252 aa and Haemophilus influenzae L-fuculose phosphate aldolase FucA or Hi0611 SW:FUCA_HAEIN (P44777) (216 aa) fasta scores: E(): 3e-08, 26.7% id in 176 aa
NP_881277.1	Weakly similar to several e.g. Rhizobium loti transcriptional regulator Mll2952 TR:Q98HA7 (EMBL:AP003000) (219 aa) fasta scores: E(): 1.4e-07, 28.2% id in 195 aa
NP_881278.1	Similar to several MarR-family regulatory proteins e.g. Escherichia coli transcriptional regulator SlyA SW:SLYA_ECOLI (P55740) (146 aa) fasta scores: E(): 1.3e-07, 34.35% id in 131 aa and to Serratia sp. ATCC39006 global regulator of antibiotic and pigment production, Rap TR:Q9RA96 (EMBL:AF168597) (145 aa) fasta scores: E(): 1.5e-07, 33.08% id in 136 aa
NP_881279.1	transposase for IS481 element
NP_881280.1	Highly similar to Bordetella pertussis filamentous hemagglutinin FhaB or BP1879 SW:FHAB_BORPE (P12255) (3591 aa) fasta scores: E(): 6.4e-175, 48.23% id in 2606 aa, and to Bordetella bronchiseptica adhesin FhaB TR:Q9JP78 (EMBL:AF111796) (3634 aa) fasta scores: E(): 2.7e-173, 46.99% id in 2679 aa. The product of this CDS is also similar to B. pertussis BP2907 E(): 9.8e-120 37.940% identity in 2670 aa.
NP_881281.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
NP_881282.1	Similar in parts to several e.g. Escherichia coli hypothetical protein YiaM B3577 SW:YIAM_ECOLI (P37674) (157 aa) fasta scores: E(): 3.5e-07, 34.05% id in 138 aa
NP_881283.1	Similar to many including: Rhizobium meliloti c4-dicarboxylate transport system, permease Smb21436 TR:CAC49665 (EMBL:AL603646) (426 aa) fasta scores: E(): 6.6e-47, 37.76% id in 421 aa and Rhizobium meliloti conserved hypothetical DedA-like protein Sma0250 TR:AAK64791 (EMBL:AE007207) (425 aa) fasta scores: E(): 7.6e-45, 38.39% id in 435 aa
NP_881284.1	Similar to Rhizobium meliloti  periplasmic binding protein Smc00271 TR:CAC46278 (EMBL:AL591788) (325 aa) fasta scores: E(): 1.2e-29, 34.74% id in 331 aa
NP_881285.1	transposase for IS481 element
NP_881286.1	transposase for IS1002 element
NP_881287.1	Previously sequenced as B. pertussis fimbrial protein FimX precursor SW:FMFX_BORPE (P09808) (201 aa) fasta scores: E(): 9.5e-77, 99% id in 201 aa. Also similar to many other Bordetella fimbrial proteins including: Bordetella bronchiseptica fimbrial subunit precursor Fim2 TR:Q44885 (EMBL:X74119) (208 aa) fasta scores: E(): 6.7e-38, 59.11% id in 203 aa and Bordetella parapertussis major fimbrial structural subunit FimA TR:O54541 (EMBL:AF022306) (201 aa) fasta scores: E(): 1.5e-22, 43.16% id in 183 aa
NP_881288.1	Similar to Escherichia coli phenylacetate-coenzyme A ligase PaaK or B1398 SW:PAAK_ECOLI (P76085) (437 aa) fasta scores: E(): 2e-112, 65.5% id in 432 aa
NP_881289.1	Similar to Escherichia coli phenylacetic acid degradation protein PaaI B1396 SW:PAAI_ECOLI (P76084) (140 aa) fasta scores: E(): 4.5e-25, 51.56% id in 128 aa
NP_881290.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_881291.1	Similar to Streptomyces coelicolor  dehydrogenase Sch69.05 TR:Q9XA29 (EMBL:AL079308) (563 aa) fasta scores: E(): 4.9e-114, 56.81% id in 558 aa and to Azoarcus evansii PaaZ TR:Q9F9V2 (EMBL:AF176259) (562 aa) fasta scores: E(): 6.2e-112, 56.44% id in 551 aa
NP_881292.1	transposase for IS481 element
NP_881293.1	Similar to Escherichia coli phenylacetic acid degradation protein PaaD B1391 SW:PAAD_ECOLI (P76080) (167 aa) fasta scores: E(): 9.2e-28, 47.56% id in 164 aa
NP_881294.1	Similar to Escherichia coli phenylacetic acid degradation protein PaaC or B1390 SW:PAAC_ECOLI (P76079) (248 aa) fasta scores: E(): 1.4e-49, 54.58% id in 251 aa
NP_881295.1	with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation
NP_881296.1	with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA
NP_881297.1	Similar to Escherichia coli phenylacetic acid degradation operon negative regulatory protein paaX or B1399 SW:PAAX_ECOLI (P76086) (316 aa) fasta scores: E(): 1.3e-34, 35.94% id in 306 aa
NP_881298.1	Similar to N-terminus of many proteins of undefined function e.g. Xylella fastidiosa hypothetical protein Xf0757 xf0757 TR:Q9PFC1 (EMBL:AE003917) (473 aa) fasta scores: E(): 9e-18, 46.79% id in 203 aa. Also similar over the entire length to Schizosaccharomyces pombe hypothetical 26.5 kDa protein C15a10.05c in chromosome I SW:YDO5_SCHPO () (242 aa) fasta scores: E(): 0.0004, 28.64% id in 185 aa
NP_881299.1	3'-5' exoribonuclease specific for small oligoribonuclotides
NP_881300.1	Similar to many  metalloproteases e.g. Campylobacter jejuni  integral membrane zinc-metalloprotease Cj0723C TR:Q9PPI4 (EMBL:AL139076) (395 aa) fasta scores: E(): 1.4e-38, 33.07% id in 393 aa
NP_881301.1	EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity
NP_881302.1	Similar to many membrane transport proteins including: Agrobacterium tumefaciens Agr_l_323p agr_l_323 TR:AAK88730 (EMBL:AE008214) (328 aa) fasta scores: E(): 1.6e-77, 67.53% id in 308 aa, and to Bacillus subtilis oligopeptide transport system permease AppB SW:APPB_BACSU () (317 aa) fasta scores: E(): 1.2e-42, 40.06% id in 317 aa
NP_881303.1	Similar to many membrane transport proteins including: Agrobacterium tumefaciens Agr_l_325p agr_l_325 TR:AAK88731 (EMBL:AE008214) (502 aa) fasta scores: E(): 6.6e-100, 51.78% id in 504 aa, and to Bacillus halodurans oligopeptide ABC transporter Bh3026 TR:Q9K8I0 (EMBL:AP001517) (525 aa) fasta scores: E(): 1.6e-32, 30.48% id in 492 aa
NP_881304.1	Similar to many  gamma-glutamyltranspeptidases e.g. Mycobacterium tuberculosis  gamma-glutamyltranspeptidase Rv0773c TR:P71828 (EMBL:Z80226) (512 aa) fasta scores: E(): 1.5e-90, 56.76% id in 525 aa. Also similar to Pseudomonas sp acylase acy 1 [includes: cephalosporin acylase SW:PAC1_PSES3 () (557 aa) fasta scores: E(): 1.1e-45, 31.81% id in 550 aa
NP_881305.1	Similar to many  transcriptional regulators e.g. Pseudomonas aeruginosa probable transcriptional regulator Pa0816 TR:Q9I5C3 (EMBL:AE004516) (294 aa) fasta scores: E(): 1.8e-20, 33.88% id in 304 aa
NP_881306.1	Similar to Bacteriophage T4 endonuclease V DenV SW:END5_BPT4 (P04418) (138 aa) fasta scores: E(): 2.2e-13, 40.83% id in 120 aa and to Chlorella virus pyrimidine dimer-specific glycosylase TR:Q9W976 (EMBL:AF128157) (139 aa) fasta scores: E(): 2.1e-12, 38.71% id in 124 aa
NP_881307.1	Similar to many nitrogen regulatory proteins e.g. Rhodobacter sphaeroides P-II SW:GLNB_RHOSH () (112 aa) fasta scores: E(): 8.4e-31, 76.78% id in 112 aa
NP_881308.1	NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers
NP_881309.1	Similar to many proteins of undefined function e.g. Escherichia coli hypothetical protein YbdG SW:YBDG_ECOLI (P39455) (415 aa) fasta scores: E(): 3.3e-60, 42.23% id in 393 aa
NP_881310.1	catalyzes the formation of arginine from (N-L-arginino)succinate
NP_881311.1	Similar to many proteins of undefined function e.g. Pseudomonas aeruginosa hypothetical protein Pa3208 TR:Q9HZ32 (EMBL:AE004744) (186 aa) fasta scores: E(): 9.6e-18, 38.83% id in 188 aa
NP_881312.1	transposase for IS481 element
NP_881313.1	Similar to several including : Clostridium acetobutylicum molybdate-binding protein Cac0252 TR:Q97ME6 (EMBL:AE007538) (319 aa) fasta scores: E(): 1.6e-14, 34.68% id in 173 aa and Alcaligenes eutrophus formate dehydrogenase FdsR TR:Q9RBF7 (EMBL:AJ007718) (299 aa) fasta scores: E(): 5.4e-48, 50.17% id in 293 aa
NP_881314.1	together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z
NP_881315.1	Similar to many including: Escherichia coli molybdopterin biosynthesis protein MoeA or Chle or BisB or NarE or B0827 SW:MOEA_ECOLI (P12281) (411 aa) fasta scores: E(): 8.4e-42, 37.73% id in 371 aa
NP_881316.1	Similar to Escherichia coli, and molybdenum cofactor biosynthesis protein B MoaB or Chla2 or B0782 or Z1001 or Ecs0860 SW:MOAB_ECOLI (P30746) (169 aa) fasta scores: E(): 1e-29, 52.56% id in 156 aa
NP_881317.1	Similar to Haemophilus influenzae molybdopterin converting factor, subunit 2 MoaE or Hi1673 SW:MOAE_HAEIN (P45308) (150 aa) fasta scores: E(): 1.9e-23, 44.37% id in 151 aa
NP_881318.1	Similar to Escherichia coli molybdopterin converting factor, subunit 1 MoaD or Chla4 or ChlM or B0784 SW:MOAD_ECOLI (P30748) (81 aa) fasta scores: E(): 4.9e-05, 46.34% id in 82 aa
NP_881319.1	Similar to Haemophilus influenzae molybdenum cofactor biosynthesis protein C MoaC or Hi1675 SW:MOAC_HAEIN (P45310) (160 aa) fasta scores: E(): 4.2e-24, 49.02% id in 153 aa
NP_881320.1	Similar over entire range to Pseudomonas aeruginosa hypothetical protein Pa4735 TR:Q9HV64 (EMBL:AE004887) (1088 aa) fasta scores: E(): 2.2e-37, 28.25% id in 1161 aa
NP_881321.1	Similar to Methylobacterium extorquens carboxymethylenebutenolidase SW:DLHH_METEX (P71505) (291 aa) fasta scores: E(): 4.8e-59, 56.8% id in 294 aa. Also similar to BP1256, 55.253% identity (55.469% ungapped) in 257 aa overlap.
NP_881323.1	Similar to Caulobacter crescentus ahpc/tsa family protein Cc3394 TR:Q9A312 (EMBL:AE006000) (160 aa) fasta scores: E(): 2.3e-30, 53.61% id in 166 aa and Rhizobium meliloti hypothetical peroxiredoxin protein Smc00072 TR:CAC45487 (EMBL:AL591785) (161 aa) fasta scores: E(): 5.1e-27, 50.9% id in 165 aa
NP_881324.1	Similar to many membrane transport proteins e.g. Pseudomonas aeruginosa probable MFS transporter Pa4887 TR:Q9HUS6 (EMBL:AE004901) (438 aa) fasta scores: E(): 1.2e-78, 54.5% id in 455 aa
NP_881325.1	Similar to many proteins of undefined function e.g. Neisseria meningitidis hypothetical protein Nmb1028 TR:Q9JZJ2 (EMBL:AE002453) (291 aa) fasta scores: E(): 3.1e-51, 52.26% id in 287 aa
NP_881326.1	Similar to many e.g. Haemophilus influenzae biotin synthase BioB or Hi1022 SW:BIOB_HAEIN (P44987) (333 aa) fasta scores: E(): 1.9e-79, 63.29% id in 316 aa
NP_881327.1	no significant database hits. Similar to BP0266, BP1766, BP3099, BP3683, and BP3731
NP_881328.1	Similar to many proposed regulators e.g. Rhizobium loti transcriptional regulator Mlr4666 TR:Q98DK2 (EMBL:AP003004) (195 aa) fasta scores: E(): 2.7e-15, 34.09% id in 176 aa
NP_881329.1	Similar to Neisseria meningitidis invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter spSE19. pilin inverting protein ChnY TR:Q9F7E1 (EMBL:AF282240) (324 aa) fasta scores: E(): 8.2e-50, 47.516% id in 322 aa
NP_881330.1	Similar to Pseudomonas putida Cadmium-Transporting ATPase CadA TR:AAK48831 (EMBL:AF333961) (737 aa) fasta scores: E(): 6.3e-147, 62% id in 737 aa and to Pseudomonas aeruginosa probable metal-transporting P-type ATPase pa3690 TR:Q9HXV0 (EMBL:AE004788) (740 aa) fasta scores: E(): 5.2e-141, 60.85% id in 746 aa
NP_881331.1	Similar to Pseudomonas putida MerR-family response regulator CadR TR:AAK48830 (EMBL:AF333961) (147 aa) fasta scores: E(): 8e-24, 51.72% id in 145 aa, and to Haemophilus influenzae Zn ZntR or Hi1623 SW:ZNTR_HAEIN (P45277) (135 aa) fasta scores: E(): 4.6e-17, 46.61% id in 118 aa
NP_881332.1	transposase for IS481 element
NP_881333.1	Similar to Caulobacter crescentus formiminoglutamase Cc0958 TR:Q9A9M0 (EMBL:AE005772) (271 aa) fasta scores: E(): 8e-43, 45.72% id in 269 aa and to Pseudomonas aeruginosa N-formylglutamate amidohydrolase HutG or Pa5091 TR:Q9HU92 (EMBL:AE004922) (266 aa) fasta scores: E(): 7.3e-41, 45.86% id in 266 aa
NP_881334.1	Similar to many inculding several proposed Prokaryotic and Eukaryotic acyl carrier proteins: Rhizobium loti 3-oxoacyl-acyl carrier protein reductase Mll1830 TR:Q98JQ5 (EMBL:AP002998) (234 aa) fasta scores: E(): 6.3e-55, 64.53% id in 234 aa and Cuphea lanceolata 3-oxoacyl-[acyl-carrier protein] reductase, chloroplast precursor Clkr27 SW:FABG_CUPLA (P28643) (320 aa) fasta scores: E(): 1.1e-17, 32.52% id in 246 aa 72.22% id in 234 aa
NP_881335.1	Similar to many SurF1-family proteins including: Caulobacter crescentus Cc1769 TR:Q9A7F4 (EMBL:AE005851) (225 aa) fasta scores: E(): 9.8e-41, 57.01% id in 228 aa and Rhizobium meliloti Smb21490 TR:CAC49719 (EMBL:AL603646) (251 aa) fasta scores: E(): 4.2e-23, 46.36% id in 179 aa
NP_881336.1	Similar to Escherichia coli cytochrome O ubiquinol oxidase CyoD or B0429 or Z0532 or Ecs0483 SW:CYOD_ECOLI (P18403) (109 aa) fasta scores: E(): 1.7e-18, 54.71% id in 106 aa and to Rhizobium loti cytochrome O ubiquinol oxidase subunit IV Mlr6849 TR:Q987Y8 (EMBL:AP003010) (125 aa) fasta scores: E(): 1.4e-28, 63.41% id in 123 aa
NP_881337.1	Similar to Escherichia coli cytochrome O ubiquinol oxidase subunit III CyoC or B0430 SW:CYOC_ECOLI (P18402) (204 aa) fasta scores: E(): 1.4e-45, 59.89% id in 187 aa and Rhizobium meliloti  cytochrome O ubiquinol oxidase chain III protein TR:CAC49717 (EMBL:AL603646) (210 aa) fasta scores: E(): 9.6e-60, 69.48% id in 213 aa. Also similar to BP2931, 57.310% identity in 171 aa overlap
NP_881338.1	Similar to Escherichia coli ubiquinol oxidase polypeptide I CyoB or B0431 or Z0534 or Ecs0485 SW:CYOB_ECOLI (P18401) (663 aa) fasta scores: E(): 1e-175, 65.74% id in 648 aa. Also similar to BP2932 (65.284% identity in 651 aa overlap), and to BP3743 (42.636% identity in 516 aa overlap)
NP_881339.1	Similar to many proposed membrane transport proteins e.g. Rhizobium meliloti  metabolite transport protein Smb21486 TR:CAC49714 (EMBL:AL603646) (431 aa) fasta scores: E(): 4.3e-91, 58.21% id in 414 aa
NP_881340.1	transposase for IS481 element
NP_881341.1	Pseudogene. This CDS appears to have a frameshift mutation following codon 274. The frameshift occurs within a polymeric tract of (C)5. The sequence has been checked and believed to be correct. Similar to many including: Neisseria meningitidis  chelatase Nma2080 TR:Q9JSY3 (EMBL:AL162758) (498 aa) fasta scores: E(): 2.2e-82, 55.66% id in 503 aa and to Xylella fastidiosa competence related protein Xf1179 TR:Q9PE49 (EMBL:AE003951) (506 aa) fasta scores: E(): 6.9e-76, 52.57% id in 504 aa
NP_881342.1	Similar to several e.g. Neisseria meningitidis hypothetical protein Nmb0404 TR:Q9K0Z7 (EMBL:AE002396) (106 aa) fasta scores: E(): 3.7e-09, 44.31% id in 88 aa
NP_881343.1	Similar to many e.g. Escherichia coli nitrogen regulatory protein P-II 2 GlnK or B0450 or Z0562 or Ecs0504 SW:GLNK_ECOLI (P38504) (112 aa) fasta scores: E(): 1.4e-27, 69.64% id in 112 aa. Note this CDS is also highly similar to the upstrean CDS BP2699 fasta scores: E(): 3.6e-29 75% identity in 112 aa.
NP_881344.1	Previously characterised as Bordetella pertussis autotransporter BapC TR:O86044 (EMBL:AF081494) (759 aa) fasta scores: E(): 0, 100% id in 759 aa. Also highly similar to Bordetella parapertussis pertactin precursor an agglutinogen that binds Eukaryotic cells, Prn SW:PERT_BORPA (P24328) (922 aa) fasta scores: E(): 6.6e-75, 44.29% id in 806 aa.
NP_881345.1	Similar to many  transcriptional regulators e.g. Rhizobium loti transcriptional regulatory protein Mlr4117 TR:Q98ER4 (EMBL:AP003003) (205 aa) fasta scores: E(): 3.5e-42, 63.21% id in 193 aa
NP_881346.1	Similar to many  membrane transport proteins e.g. Rhizobium loti transmembrane transport protein Mll4118 TR:Q98ER5 (EMBL:AP003003) (446 aa) fasta scores: E(): 4.8e-105, 66.9% id in 414 aa
NP_881347.1	Similar to many  membrane transport proteins e.g. Thermotoga maritima branched chain amino acid ABC transporter ATP-binding protein Tm1139 TR:Q9X0M3 (EMBL:AE001771) (239 aa) fasta scores: E(): 9.5e-43, 55.5% id in 236 aa
NP_881348.1	Similar to many  membrane transport proteins e.g. Deinococcus radiodurans branched-chain amino acid ABC transporter ATP-binding protein Dr2119 TR:Q9RSK5 (EMBL:AE002047) (259 aa) fasta scores: E(): 2.5e-44, 57.83% id in 249 aa
NP_881349.1	Similar to many  membrane transport proteins e.g. Deinococcus radiodurans branched-chain amino acid ABC transporter permease dr1036 TR:Q9RVJ2 (EMBL:AE001955) (471 aa) fasta scores: E(): 2.8e-50, 48.04% id in 358 aa
NP_881350.1	Similar to many  membrane transport proteins including: Rhizobium meliloti probable high-affinity branched-chain amino acid transport permease ABC transporter protein TR:CAC47064 (EMBL:AL591790) (300 aa) fasta scores: E(): 9.8e-43, 48.52% id in 305 aa and Escherichia coli high-affinity branched-chain amino acid transport system permease livH or B3457 or Z4827 or Ecs4304 SW:LIVH_ECOLI (P08340) (308 aa) fasta scores: E(): 1e-39, 45.09% id in 306 aa
NP_881351.1	Similar to many  membrane transport solute-binding proteins including: Rhizobium meliloti  leucine-specific binding protein precursor TR:CAC47059 (EMBL:AL591790) (372 aa) fasta scores: E(): 3.8e-35, 36.21% id in 359 aa and Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC or Pa1074 SW:BRAC_PSEAE (P21175) (373 aa) fasta scores: E(): 4.3e-32, 33.33% id in 357 aa
NP_881352.1	transposase for IS481 element
NP_881353.1	proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein
NP_881354.1	no significant database hits
NP_881355.1	Similar to many including: Neisseria meningitidis (serogroup A) hypothetical integral membrane protein Nma1929 or Nmb1671 TR:Q9JRE7 (EMBL:AL162757) (553 aa) fasta scores: E(): 4.3e-47, 32.27% id in 567 aa and Escherichia coli paraquat-inducible protein B PqiB SW:PQIB_ECOLI (P43671) (546 aa) fasta scores: E(): 9.6e-37, 33.14% id in 528 aa
NP_881356.1	Similar to Escherichia coli paraquat-inducible protein a pqia or pqi5a or b0950 SW:PQIA_ECOLI (P43670) (417 aa) fasta scores: E(): 8.1e-35, 36.09% id in 374 aa
NP_881357.1	Similar to Escherichia coli ATP-dependent Clp protease ATP-binding protein ClpA or LopD or B0882 or Z1119 or Ecs0968 SW:CLPA_ECOLI (P15716) (758 aa) fasta scores: E(): 8.5e-171, 61.73% id in 763 aa. Also similar to BP1198, 37.133% identity (46.014% ungapped) in 886 aa overlap.
NP_881358.1	Similar to Escherichia coli penicillin-binding protein 1c PbpC or B2519 SW:PBPC_ECOLI (P76577) (770 aa) fasta scores: E(): 1.3e-106, 46.04% id in 771 aa
NP_881359.1	Similar to Xylella fastidiosa hypothetical protein Xf1252 TR:Q9PDX7 (EMBL:AE003959) (1641 aa) fasta scores: E(): 9.2e-134, 37.23% id in 1708 aa
NP_881360.1	involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA
NP_881361.1	Similar to Salmonella typhimurium cold shock protein CspA SW:CSPA_SALTY (P37410) (69 aa) fasta scores: E(): 8.7e-15, 66.66% id in 66 aa. Also similar to many cold shock-like proteins e.g. Stigmatella aurantiaca cold shock-like protein CspA SW:CSPA_STIAU (P72366) (68 aa) fasta scores: E(): 6.8e-17, 72.3% id in 65 aa
NP_881362.1	Similar in parts to several including: Plasmid pSB102 hypothetical 17.7 kDa protein TR:CAC79159 (EMBL:AJ304453) (160 aa) fasta scores: E(): 4.9e-15, 36.91% id in 149 aa and Treponema pallidum conserved hypothetical protein tp0087 TR:O83125 (EMBL:AE001193) (179 aa) fasta scores: E(): 7.1e-14, 41.81% id in 110 aa
NP_881363.1	catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA
NP_881364.1	Similar to several chloride-channel proteins including: Burkholderia cepacia chloride-channel protein TR:AAK81672 (EMBL:AF029344) (443 aa) fasta scores: E(): 2.8e-45, 40.82% id in 414 aa and to Escherichia coli voltage-gated Clc-type chloride channel EriC or B0155 SW:ERIC_ECOLI (P37019) (473 aa) fasta scores: E(): 1.1e-17, 30.11% id in 455 aa
NP_881365.1	Previously sequence: Bordetella pertussis superoxide dismutase [fe] SodB SW:SODF_BORPE (P37369) (192 aa) fasta scores: E(): 3.9e-80, 99.47% id in 192 aa. Also similar to BP0193, 40.201% identity (41.885% ungapped) in 199 aa overlap.
NP_881366.1	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides
NP_881367.1	transposase for IS481 element
NP_881368.1	Similar to several e.g. Synechocystis sp biopolymer transport ExbB-like protein 3 sll1404 SW:EXB3_SYNY3 (P72604) (210 aa) fasta scores: E(): 2.4e-09, 29.89% id in 184 aa
NP_881369.1	Similar to many including Vibrio cholerae biopolymer transport protein Exbd2 or Vc1545 SW:EXD2_VIBCH (Q9ZHV9) (134 aa) fasta scores: E(): 5.3e-06, 30.3% id in 132 aa and to Bordetella pertussis ExbD protein TR:Q9S3M4 (EMBL:AJ132741) (155 aa) fasta scores: E(): 9.4e-06, 31.61% id in 136 aa
NP_881370.1	transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate
NP_881371.1	Similar to Escherichia coli, and protein YcaR or B0917 or Z1263 or Ecs1000 SW:YCAR_ECOLI (P75844) (60 aa) fasta scores: E(): 2.6e-11, 53.57% id in 56 aa
NP_881372.1	CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS
NP_881373.1	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP
NP_881374.1	Similar to many Prokaryotic and Eukaryotic dehydrogenases e.g. Pseudomonas aeruginosa probable short-chain dehydrogenase Pa2554 TR:Q9I0T0 (EMBL:AE004683) (255 aa) fasta scores: E(): 3.8e-60, 67.05% id in 255 aa and Drosophila melanogaster 3-hydroxyacyl-coa dehydrogenase type II Scu or Cg7113 SW:HCD2_DROME (O18404) (255 aa) fasta scores: E(): 6.6e-45, 55.9% id in 254 aa
NP_881375.1	Similar to many proteins which display high sequence similarity to the MviN virulence factor. The function of these related proteins remains unclear e.g. Escherichia coli virulence factor homolog MviN or B1069 or Z1707 or Ecs1447 SW:MVIN_ECOLI (P75932) (511 aa) fasta scores: E(): 3.2e-89, 49.71% id in 521 aa
NP_881376.1	Weakly similar to many proposed trancriptional regulators e.g. Escherichia coli protein FecR or B4292 SW:FECR_ECOLI (P23485) (317 aa) fasta scores: E(): 4.4e-17, 30.38% id in 316 aa
NP_881377.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase
NP_881378.1	cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate
NP_881379.1	transposase for IS481 element
NP_881380.1	Similar to several e.g. Pyrococcus abyssi malate dehydrogenase Mdh or Pab1791 SW:MDH_PYRAB (Q9V0D5) (362 aa) fasta scores: E(): 1e-28, 34.88% id in 344 aa.
NP_881381.1	transposase for IS481 element
NP_881382.1	Similar to many proteins of undefined function e.g. Pseudomonas aeruginosa hypothetical 8.0 kDa protein Pa3031 TR:O68801 (EMBL:AF053982) (73 aa) fasta scores: E(): 4.7e-10, 51.51% id in 66 aa
NP_881383.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
NP_881384.1	catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine
NP_881385.1	Similar to Escherichia coli hypothetical aminotransferase YfdZ or B2379 SW:YFDZ_ECOLI (P77434) (412 aa) fasta scores: E(): 4.8e-129, 79.64% id in 393 aa
NP_881386.1	Similar in parts to Methylobacillus flagellatum membrane protein TR:Q9RAN1 (EMBL:L78665) (122 aa) fasta scores: E(): 3e-05, 35.17% id in 145 aa
NP_881387.1	Similar to many bacterioferritin comigratory proteins the function of which are unclear e.g. Pseudomonas aeruginosa Bcp or Pa1008 TR:Q9I4W5 (EMBL:AE004533) (157 aa) fasta scores: E(): 1.9e-35, 62.33% id in 154 aa
NP_881388.1	The C-terminus of the product of this CDS is similar to many hypothetical proteins e.g. Vibrio cholerae hypothetical protein Vc2507 vc2507 TR:Q9KP69 (EMBL:AE004321) (458 aa) fasta scores: E(): 1.3e-48, 42.85% id in 462 aa. The N-terminus displays no significant database hits and conrtains a proline rich repeat region with 4xPAPA repeats.
NP_881389.1	Weakly similar to a number of pyridoxal phosphate biosynthetic proteins e.g. Escherichia coli PdxA or B0052 SW:PDXA_ECOLI (P19624) (329 aa) fasta scores: E(): 9.4e-36, 38.43% id in 320 aa. Also similar to BP1813, 46.233% identity (49.451% ungapped) in 292 aa overlap.
NP_881390.1	Similar to several proteins of undefined function e.g. Pseudomonas aeruginosa hypothetical protein Pa2026 SW:YK26_PSEAE (P39879) (333 aa) fasta scores: E(): 8.2e-82, 65.83% id in 322 aa
NP_881391.1	unwinds double stranded DNA
NP_881392.1	no significant database hits
NP_881393.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
NP_881394.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
NP_881395.1	binds single-stranded DNA at the primosome assembly site
NP_881396.1	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
NP_881397.1	similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis
NP_881398.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
NP_881399.1	Similar to Bradyrhizobium japonicum probable geranyltranstransferase SW:ISPA_BRAJA (Q45220) (332 aa) fasta scores: E(): 2.2e-42, 49.65% id in 288 aa
NP_881400.1	catalyzes the bidirectional exonucleolytic cleavage of DNA
NP_881401.1	Similar in the C-terminus to many  transcriptional regulators e.g. Rhizobium meliloti  transcriptional regulator IclR family protein Smb20586 TR:CAC49898 (EMBL:AL603647) (251 aa) fasta scores: E(): 6.9e-13, 30.08% id in 246 aa. Similar over the entire range to Pseudomonas putida pca regulon regulatory protein PcaR SW:PCAR_PSEPU (Q52154) (291 aa) fasta scores: E(): 3.1e-12, 27.64% id in 293 aa
NP_881402.1	Similar to several proteins of undefined function e.g. Bordetella pertussis hypothetical 34.9 kDa protein SW:YBR5_BORPE (O30446) (323 aa) fasta scores: E(): 8.8e-37, 34.29% id in 312 aa
NP_881403.1	no significant database hits
NP_881404.1	Similar to Bordetella bronchiseptica AlcE, involved in the iron siderophore alcaligin biosynthesis, SWALL:O52833 (EMBL:AJ000061) (397 aa) fasta scores: E(): 3.3e-120, 71.57% id in 380 aa. Also similar to BP2460, 71.842% identity in 380 aa overlap.
NP_881405.1	Similar to many  Mg transporters e.g. Pseudomonas aeruginosa probable Mg transporter MgtE or Pa0913 TR:Q9I544 (EMBL:AE004525) (482 aa) fasta scores: E(): 7.3e-87, 55.36% id in 475 aa
NP_881406.1	Similar to several  thioesterases e.g. Escherichia coli  acyl-CoA thioester hydrolase precursor YciA SW:YCIA_ECOLI (P04379) (132 aa) fasta scores: E(): 1.3e-15, 43.65% id in 126 aa
NP_881407.1	Similar to severale.g. Pseudomonas aeruginosa hypothetical protein Pa5383 TR:Q9HTI1 (EMBL:AE004951) (355 aa) fasta scores: E(): 1.5e-45, 42.45% id in 351 aa
NP_881408.1	Similar to many transcriptional regulators e.g. Chromatium vinosum rubisco operon transcriptional regulator RbcR SW:RBCR_CHRVI (P25544) (302 aa) fasta scores: E(): 1e-21, 36.96% id in 257 aa
NP_881409.1	Similar to many e.g. Pseudomonas aeruginosa probable hydrolase Pa2922 TR:Q9HZS5 (EMBL:AE004718) (389 aa) fasta scores: E(): 3.3e-76, 49.87% id in 395 aa and to Arabidopsis thaliana IAA-amino acid hydrolase 3 precursor Iar3 or Ill1 or At5g56650 SW:ILR3_ARATH (P54969) (438 aa) fasta scores: E(): 1.6e-50, 40.62% id in 384 aa. Also similar to BP3857 (57.179% identity in 397 aa overlap), and to BP3036 (49.873% identity in 393 aa overlap)
NP_881410.1	Similar to Escherichia coli long-chain-fatty-acid--CoA ligase FadD SW:LCFA_ECOLI (P29212) (561 aa) fasta scores: E(): 4e-115, 54.93% id in 557 aa
NP_881411.1	transposase for IS481 element
NP_881412.1	Similar in the C-terminus to many extragenic suppressor proteins e.g. Escherichia coli extragenic suppressor protein SuhB or SsyA or B2533 SW:SUHB_ECOLI (P22783) (267 aa) fasta scores: E(): 2.4e-20, 41.87% id in 277 aa. Also similar to Vibrio cholerae inositol monophosphate family protein vc0745 TR:Q9KTY5 (EMBL:AE004160) (288 aa) fasta scores: E(): 3.7e-16, 39.24% id in 265 aa. Also similar to BP1902, 40.000% identity (43.200% ungapped) in 270 aa overlap.
NP_881413.1	Weakly similar to several e.g. Thermotoga maritima alpha-xylosidase Tm0308 TR:Q9WYE4 (EMBL:AE001712) (764 aa) fasta scores: E(): 2.3e-34, 25.7% id in 607 aa
NP_881414.1	Similar to Escherichia coli ATP-binding protein ABC SW:ABC_ECOLI (P30750) (343 aa) fasta scores: E(): 2.1e-49, 44.28% id in 350 aa
NP_881415.1	Similar to many ABC transport proteins e.g. Rhizobium loti ABC transporter permease Mll4791 TR:Q98DA3 (EMBL:AP003005) (218 aa) fasta scores: E(): 3.7e-40, 65.32% id in 199 aa
NP_881416.1	Similar to Rhizobium meliloti  outer membrane lipoprotein Smc03157 TR:CAC47467 (EMBL:AL591792) (258 aa) fasta scores: E(): 3.2e-54, 58.39% id in 262 aa
NP_881417.1	transposase for IS481 element
NP_881418.1	Similar to several including: Pseudomonas putida alcohol dehydrogenase AdhA TR:O68647 (EMBL:AF052750) (382 aa) fasta scores: E(): 2e-38, 39.06% id in 384 aa and to Escherichia coli ethanolamine utilization protein EutG or b2453 SW:EUTG_ECOLI (P76553) (395 aa) fasta scores: E(): 9.7e-33, 33.77% id in 379 aa
NP_881419.1	transposase for IS481 element
NP_881420.1	Similar to several proteins of undefined function e.g. Pyrococcus abyssi hypothetical 13.6 kDa protein pab1062 TR:Q9UY93 (EMBL:AJ248288) (130 aa) fasta scores: E(): 4e-10, 32.2% id in 118 aa
NP_881421.1	Similar to several proteins of undefined function e.g. Methanothermobacter thermautotrophicus conserved protein Mth1421 TR:O27472 (EMBL:AE000904) (399 aa) fasta scores: E(): 1.9e-34, 33.5% id in 391 aa
NP_881422.1	Similar to Rhizobium meliloti  GntR-family transcription factor Sma1442 TR:AAK65446 (EMBL:AE007265) (254 aa) fasta scores: E(): 2.5e-11, 28.82% id in 229 aa
NP_881423.1	Similar to several e.g. Rhizobium meliloti conserved hypothetical protein sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 8.5e-40, 37.22% id in 317 aa
NP_881424.1	no significant database hits
NP_881425.1	Similar to Streptococcus pneumoniae ABC transporter permease Sp1689 TR:Q97PE2 (EMBL:AE007461) (294 aa) fasta scores: E(): 5.9e-31, 31.56% id in 282 aa and to Rhizobium loti sugar ABC transporter permease Mlr7226 TR:Q986S7 (EMBL:AP003011) (298 aa) fasta scores: E(): 1.5e-27, 31.84% id in 292 aa
NP_881426.1	Similar to many  membrane transport proteins e.g. Rhizobium meliloti  sugar uptake ABC transporter permease Smb21458 TR:CAC49684 (EMBL:AL603646) (291 aa) fasta scores: E(): 2.1e-29, 35.98% id in 264 aa
NP_881427.1	Similar to many  membrane transport proteins e.g. Rhizobium loti sugar binding protein of ABC transporter mll1716 TR:Q98JZ1 (EMBL:AP002998) (383 aa) fasta scores: E(): 2.7e-41, 40.47% id in 378 aa
NP_881428.1	Similar to Escherichia coli  ABC transporter periplasmic binding protein YcjN precursor or B1310 SW:YCJN_ECOLI (P76042) (430 aa) fasta scores: E(): 1.3e-18, 24.53% id in 428 aa
NP_881429.1	Weakly similar to Rhizobium loti transcription regulator Mll9009 TR:Q982L6 (EMBL:AP003015) (269 aa) fasta scores: E(): 6.5e-05, 24.41% id in 213 aa
NP_881430.1	Similar to Pseudomonas aeruginosa redox-sensitive transcriptional activator SoxR or Pa2273 SW:SOXR_PSEAE (Q51506) (156 aa) fasta scores: E(): 1.6e-33, 62.41% id in 149 aa
NP_881431.1	Similar to many DNA hydrolases responsble for DNA damage repair e.g. Escherichia coli DNA-3-methyladenine glycosylase I Tag or B3549 SW:3MG1_ECOLI (P05100) (187 aa) fasta scores: E(): 6.5e-31, 48.6% id in 179 aa
NP_881432.1	Highly similar to several proteins of undefined function e.g. Pseudomonas aeruginosa hypothetical protein Pa4879 pa4879 TR:Q9HUT4 (EMBL:AE004901) (689 aa) fasta scores: E(): 9e-116, 58.92% id in 706 aa
NP_881433.1	Similar to many proposed regulators e.g. Rhizobium loti probable transcriptional regulator Mlr0535 TR:Q98ML2 (EMBL:AP002995) (204 aa) fasta scores: E(): 6e-33, 51.92% id in 208 aa
NP_881434.1	Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase Pa0182 TR:Q9I6V0 (EMBL:AE004456) (250 aa) fasta scores: E(): 1.5e-43, 55.2% id in 250 aa and to Bacillus subtilis 3-oxoacyl-[acyl-carrier protein] reductase FabG SW:FABG_BACSU (P51831) (246 aa) fasta scores: E(): 7.9e-25, 37.86% id in 243 aa
NP_881435.1	transposase for IS481 element
NP_881436.1	transposase for IS481 element
NP_881437.1	Similar to several transcriptional regulators e.g. Escherichia coli hca operon transcriptional activator HcaR or PhdR or B2537 SW:HCAR_ECOLI (Q47141) (296 aa) fasta scores: E(): 9.7e-08, 27.3% id in 282 aa
NP_881438.1	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate
NP_881439.1	Highly similar to the Bordetella pertussis outer membrane porin protein precursor (BP0840) SW:OMP_BORPE (Q04064) (385 aa) fasta scores: E(): 6.4e-58, 53.72% id in 389 aa. Also similar to BP0267 (63.345% identity in 281 aa overlap), and BP0840 (53.728% identity in 389 aa overlap).
NP_881440.1	transposase for IS481 element
NP_881441.1	Similar to several e.g. Streptomyces exfoliatus 20-beta-hydroxysteroid dehydrogenase SW:2BHD_STREX (P19992) (255 aa) fasta scores: E(): 1e-26, 41.4% id in 256 aa
NP_881442.1	Similar to Bacillus subtilis glucose 1-dehydrogenase ii ycdF SW:DHG2_BACSU (P80869) (258 aa) fasta scores: E(): 1.7e-26, 38.34% id in 253 aa
NP_881443.1	Similar to many membrane transport proteins e.g. Escherichia coli alpha-ketoglutarate permease KgtP or WitA or B2587 SW:KGTP_ECOLI (P17448) (432 aa) fasta scores: E(): 1.3e-45, 34.81% id in 428 aa
NP_881444.1	Similar to several proteins of unknown function e.g. Escherichia coli hypothetical 31.7 kDa protein SW:YPT2_ECOLI (Q99390) (286 aa) fasta scores: E(): 8.1e-15, 27.11% id in 284 aa
NP_881445.1	Similar to several including: Caulobacter crescentus isoleucine biosynthesis transcriptional activator Ilvr or Cc3045 SW:ILVR_CAUCR (P52670) (296 aa) fasta scores: E(): 1.2e-18, 33.11% id in 311 aa
NP_881446.1	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate
NP_881447.1	Similar to many proteins of unknown function e.g. Escherichia coli O157:H7 hypothetical 25.8 kDa protein Ecs2700 TR:BAB36123 (EMBL:AP002559) (231 aa) fasta scores: E(): 3.5e-32, 50.46% id in 214 aa
NP_881448.1	Highly similar to Rhizobium meliloti copper-transporting ATPase ActP SW:ATCU_RHIME (Q9X5X3) (827 aa) fasta scores: E(): 1.5e-179, 66.58% id in 802 aa, and to Synechococcus sp cation-transporting ATPase PacS SW:ATCS_SYNP7 (P37279) (747 aa) fasta scores: E(): 2.3e-110, 49.33% id in 748 aa. Note the differing predicted N-termini of these proteins. The Bordetella protein is predicted to be ~18 aa shorter than the other two examples. The upstream IS481 element may offer one explanation for this. It is also not clear if the insertion of this IS element affects the expression of this CDS.
NP_881449.1	transposase for IS481 element
NP_881450.1	Similar to several proteins of undefined function e.g. Rhizobium loti Mll7047 protein TR:Q987H8 (EMBL:AP003010) (126 aa) fasta scores: E(): 1.1e-09, 37.06% id in 116 aa
NP_881451.1	Similar to several proteins of undefined function e.g. Rhizobium loti Mlr0372 protein TR:Q98MZ7 (EMBL:AP002994) (296 aa) fasta scores: E(): 8.7e-07, 26.91% id in 301 aa
NP_881452.1	Similar to many  alcohol dehydrogenases e.g. Halobacterium sp alcohol dehydrogenase Adh4 or Vng1821G TR:Q9HP38 (EMBL:AE005083) (347 aa) fasta scores: E(): 1.7e-29, 42.33% id in 352 aa
NP_881453.1	Similar to several proteins of undefined function e.g. Sphingomonas aromaticivorans hypothetical 14.5 kDa protein TR:O85848 (EMBL:AF079317) (137 aa) fasta scores: E(): 5.1e-06, 31.91% id in 141 aa
NP_881454.1	Similar to many membrane transport proteins e.g. Escherichia coli taurine transport ATP-binding protein TauB or SsiB or B0366 SW:TAUB_ECOLI (Q47538) (255 aa) fasta scores: E(): 2.9e-29, 45.37% id in 216 aa
NP_881455.1	Similar to many membrane transport proteins e.g. Rhizobium loti ABC transporter permease mlr6798 TR:Q988C6 (EMBL:AP003010) (275 aa) fasta scores: E(): 5.8e-26, 34.28% id in 245 aa, and to Escherichia coli  aliphatic sulfonates transport permease ssuc ssuc or b0934 SW:SSUC_ECOLI (P75851) (263 aa) fasta scores: E(): 4.6e-19, 28.92% id in 242 aa
NP_881456.1	The very N-terminus of the predicted product of this CDS is similar to Rhizobium loti Msr6094 protein TR:Q98A99 (EMBL:AP003008) (79 aa) fasta scores: E(): 9.3e-05, 44.59% id in 74 aa. Otherwise there are no significant database hits. Similar to BP0779, 43.785% identity (43.909% ungapped) in 354 aa overlap.
NP_881457.1	Similar to many  acid CoA ligases e.g. Rhizobium loti Mlr1843 TR:Q98JP7 (EMBL:AP002998) (495 aa) fasta scores: E(): 4.9e-39, 33.12% id in 486 aa
NP_881458.1	no significant database hits. Similar to BP3011, 45.562% identity (47.531% ungapped) in 169 aa overlap.
NP_881459.1	Similar to many proposed transcriptional regulators e.g. Rhizobium meliloti  transcription regulator protein Smc00131 TR:CAC46458 (EMBL:AL591788) (162 aa) fasta scores: E(): 7.2e-38, 63.57% id in 151 aa
NP_881460.1	Similar to many proteins of undefined function e.g. Rhizobium meliloti hypothetical protein Sma1927 sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.9e-52, 48.91% id in 321 aa
NP_881461.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
NP_881462.1	Similar to Pseudomonas putida amidase SW:AMID_PSEPU (O69768) (466 aa) fasta scores: E(): 5.2e-18, 27.98% id in 461 aa and to Rhizobium loti glu-trna amidotransferase, subunit a mlr6081 TR:Q98AB0 (EMBL:AP003008) (478 aa) fasta scores: E(): 3.4e-23, 31.6% id in 443 aa
NP_881463.1	Similar to many transcriptional regulators e.g. Escherichia coli glycine cleavage system transcriptional activator GcvA or b2808 or Z4125 or Ecs3668 SW:GCVA_ECOLI (P32064) (305 aa) fasta scores: E(): 2.4e-34, 37.5% id in 288 aa
NP_881464.1	Similar to many membrane transport proteins e.g. Escherichia coli cyanate transport protein CynX or b0341 SW:CYNX_ECOLI (P17583) (384 aa) fasta scores: E(): 1.9e-46, 41.36% id in 382 aa
NP_881465.1	Similar to several proteins of undefined function e.g. Pseudomonas aeruginosa probable deaminase Pa2499 TR:Q9I0Y3 (EMBL:AE004677) (151 aa) fasta scores: E(): 8e-31, 59.45% id in 148 aa
NP_881466.1	Similar to many proteins carrying the mainly Eukaryotic Ankyrin repeat motif e.g. Pseudomonas aeruginosa hypothetical protein Pa2498 pa2498 TR:Q9I0Y4 (EMBL:AE004677) (210 aa) fasta scores: E(): 2.2e-42, 66.19% id in 213 aa, and to Burkholderia solanacearum probable ankyrin repeat harboring signal peptide protein rsc0781 TR:CAD14483 (EMBL:AL646061) (261 aa) fasta scores: E(): 2.7e-26, 49.73% id in 189 aa
NP_881467.1	Similar to many proposed transcriptional regulators including: Streptomyces coelicolor Sc4b5.05C TR:Q9ZBW3 (EMBL:AL034443) (292 aa) fasta scores: E(): 1.5e-24, 38.43% id in 281 aa and to Pseudomonas aeruginosa Pa2497 TR:Q9I0Y5 (EMBL:AE004677) (292 aa) fasta scores: E(): 8.5e-67, 66.31% id in 285 aa
NP_881468.1	transposase for IS481 element
NP_881469.1	Similar to many proteins of undefined function e.g. Pseudomonas aeruginosa hypothetical protein Pa2651 TR:Q9I0I7 (EMBL:AE004694) (352 aa) fasta scores: E(): 1.2e-93, 76.1% id in 339 aa, and to Escherichia coli hypothetical protein YdiK or B1688 SW:YDIK_ECOLI (P77175) (370 aa) fasta scores: E(): 3.8e-19, 28.32% id in 346 aa
NP_881471.1	no significant database hits
NP_881472.1	Similar to Chromatium vinosum hydrogenase cytochrome B-type subunit homolog TR:Q46471 (EMBL:U25811) (231 aa) fasta scores: E(): 4.2e-30, 45.07% id in 213 aa
NP_881473.1	Similar to Alcaligenes xylosoxydans xylosoxydans cytochrome c' SW:CYCP_ALCXX (P00138) (127 aa) fasta scores: E(): 1.2e-39, 81.89% id in 127 aa and to Neisseria meningitidis  C-type cytochrome Nma1119 TR:Q9JUV4 (EMBL:AL162755) (152 aa) fasta scores: E(): 2.3e-15, 38.81% id in 152 aa
NP_881474.1	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide
NP_881475.1	Similar to serveral including: Escherichia coli hypothetical Gst-like protein YibF or b3592 SW:YIBF_ECOLI (P32105) (202 aa) fasta scores: E(): 1.5e-26, 40.88% id in 203 aa, and to Escherichia coli O157:H7 EDL933 S-transferase YibF TR:AAG58736 (EMBL:AE005586) (202 aa) fasta scores: E(): 1.5e-26, 40.88% id in 203 aa
NP_881476.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa0340 pa0340 TR:Q9I6F3 (EMBL:AE004472) (267 aa) fasta scores: E(): 3e-32, 41.4% id in 256 aa, and to Neisseria meningitidis hypothetical protein Nmb1319 nmb1319 TR:Q9JZ32 (EMBL:AE002480) (257 aa) fasta scores: E(): 1.4e-28, 37.74% id in 257 aa
NP_881477.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
NP_881478.1	Similar to several including: Pseudomonas aeruginosa probable transcriptional regulator Pa0448 TR:Q9I670 (EMBL:AE004482) (302 aa) fasta scores: E(): 1.3e-48, 43.05% id in 295 aa and to Escherichia coli glycine cleavage system transcriptional activator GcvA or b2808 or z4125 or Ecs3668 SW:GCVA_ECOLI (P32064) (305 aa) fasta scores: E(): 5.1e-32, 34.78% id in 299 aa
NP_881479.1	Similar to many including: Rhizobium meliloti hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.5e-51, 45.79% id in 321 aa and to Streptomyces coelicolor  secreted protein 2Scg38.31 TR:Q9EWY8 (EMBL:AL445503) (332 aa) fasta scores: E(): 6e-14, 26.39% id in 322 aa
NP_881480.1	Similar to many proposed hydrolases including: Rhizobium loti N-formylglutamate amidohydrolase Mll3040 TR:Q98H42 (EMBL:AP003001) (313 aa) fasta scores: E(): 4.9e-33, 40.6% id in 266 aa, and to Rhizobium loti N-formylglutamate amidohydrolase, hutg mlr8322 TR:Q983H9 (EMBL:AP003013) (273 aa) fasta scores: E(): 7e-11, 30.14% id in 282 aa
NP_881481.1	Similar to Rhodospirillum rubrum NAD(P) transhydrogenase, alpha subunit part 1 PntaA or NntA1 SWALL:Q60164 (EMBL:U05294) (384 aa) fasta scores: E(): 8.2e-59, 51.32% id in 378 aa, and to Ralstonia solanacearum probable NAD(P) transhydrogenase PntaA or Rsc2730 or Rs00124 SWALL:CAD16437 (EMBL:AL646071) (379 aa) fasta scores: E(): 2.6e-96, 73.51% id in 370 aa
NP_881482.1	Similar in the C-terminus to several transcriptional regulators including: Salmonella typhimurium  transcriptional activator in FoxA 5'region TR:O69047 (EMBL:AF060876) (325 aa) fasta scores: E(): 6.3e-12, 31.75% id in 296 aa and to Bordetella bronchiseptica AlcR TR:O52834 (EMBL:AJ000061) (303 aa) fasta scores: E(): 7.5e-11, 28.17% id in 291 aa
NP_881483.1	Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space
NP_881484.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa2689 SWALL:Q9I0F2 (EMBL:AE004697) (304 aa) fasta scores: E(): 2.4e-25, 39.79% id in 289 aa, and to Escherichia coli IroE protein SWALL:CAC43425 (EMBL:X16664) (318 aa) fasta scores: E(): 1.8e-16, 34.01% id in 244 aa; Weakly similar to several proteins of undefined function e.g. Pseudomonas aeruginosa hypothetical protein Pa2689 TR:Q9I0F2 (EMBL:AE004697) (304 aa) fasta scores: E(): 2.4e-25, 39.79% id in 289 aa
NP_881485.1	Similar to Escherichia coli glycolate oxidase iron-sulfur subunit GlcF or Gox or b2978 SW:GLCF_ECOLI (P52074) (407 aa) fasta scores: E(): 3.4e-77, 52.69% id in 408 aa and to Rhizobium loti glycolate oxidase subunit Mlr6920 TR:Q987T7 (EMBL:AP003010) (441 aa) fasta scores: E(): 4.7e-34, 42.79% id in 423 aa
NP_881486.1	Similar to Pseudomonas aeruginosa glycolate oxidase subunit GlcE or Pa5354 TR:Q9HTK4 (EMBL:AE004947) (359 aa) fasta scores: E(): 2.9e-36, 51.51% id in 363 aa, and to Escherichia coli glycolate oxidase subunit GlcE or Gox or b2977.1 SW:GLCE_ECOLI (P52073) (350 aa) fasta scores: E(): 7.5e-36, 47.93% id in 363 aa
NP_881487.1	Similar to Escherichia coli glycolate oxidase subunit GlcD or Gox or b2979 SW:GLCD_ECOLI (P52075) (499 aa) fasta scores: E(): 1.7e-117, 60.2% id in 495 aa, and to Pseudomonas aeruginosa glycolate oxidase subunit GlcD or Pa5355 TR:Q9HTK3 (EMBL:AE004947) (499 aa) fasta scores: E(): 8.2e-120, 62.02% id in 503 aa
NP_881488.1	Similar to many including: Rhizobium loti probable D-lactate dehydrogenase Mll1488 TR:Q98KG4 (EMBL:AP002997) (575 aa) fasta scores: E(): 5.3e-98, 55.26% id in 456 aa and to Kluyveromyces lactis D-lactate dehydrogenase [cytochrome] mitochondrial precursor Dld1 SW:DLD1_KLULA (Q12627) (579 aa) fasta scores: E(): 3.2e-62, 40.61% id in 426 aa and to Escherichia coli glycolate oxidase subunit GlcD GlcD or Gox or b2979 SW:GLCD_ECOLI (P52075) (499 aa) fasta scores: E(): 1e-39, 31.38% id in 462 aa. Also weakly similar to the adjoining CDS: BP2905 fasta scores: E(): 3.8e-39 30.655% identity in 473 aa
NP_881489.1	Similar to Bordetella bronchiseptica adhesin FhaB or BP1879 TR:Q9JP78 (EMBL:AF111796) (3634 aa)fasta scores: E(): 9e-125, 33.527% id in 2750 aa and to Bordetella pertussis filamentous hemagglutinin fhaB SW:FHAB_BORPE (P12255) (3591 aa) fasta scores: E(): 1.4e-123, 33.67% id in 2705 aa. The product of this CDS is also similar to B. pertussis BP2667 E(): 7.1e-117, 37.949% identity in 2672 aa.
NP_881490.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive
NP_881491.1	Similar to many proteins displaying simlarity to the E. coli suppressor protein TldD e.g. Neisseria meningitidis protein TldD homolog or Nma0367 TR:Q9JWH8 (EMBL:AL162752) (480 aa) fasta scores: E(): 6.2e-116, 63.91% id in 485 aa. Also similar to the Escherichia coli TldD protein SW:TLDD_ECOLI (P46473) (481 aa) fasta scores: E(): 1.7e-106, 59% id in 483 aa
NP_881492.1	Similar to many including: Neisseria meningitidis nitrilase Nmb0441 TR:Q9K0W5 (EMBL:AE002400) (270 aa) fasta scores: E(): 5.6e-52, 53.23% id in 263 aa and to Pseudomonas aeruginosa hypothetical protein Pa4475 TR:Q9HVU6 (EMBL:AE004861) (282 aa) fasta scores: E(): 5.1e-42, 46.86% id in 271 aa
NP_881493.1	Previously sequenced Bordetella pertussis Bph3 TR:O07507 (EMBL:U82566) (123 aa) fasta scores: E(): 5.2e-42, 100% id in 123 aa
NP_881494.1	transposase for IS481 element
NP_881495.1	Similar to several including: Agrobacterium tumefaciens Agr_c_3680p agr_c_3680 TR:AAK87785 (EMBL:AE008119) (262 aa) fasta scores: E(): 5.1e-25, 37.02% id in 262 aa and to Pseudomonas fluorescens transmembrane regulator PrtR TR:Q9KIN0 (EMBL:AF228766) (242 aa) fasta scores: E(): 1.7e-12, 31.25% id in 240 aa
NP_881496.1	Similar to many  RNA polymerase sigma factors e.g. Bradyrhizobium japonicum EcfA TR:Q9EXR8 (EMBL:AJ304855) (172 aa) fasta scores: E(): 1.6e-20, 51.22% id in 164 aa
NP_881497.1	Similar to several including: Pseudomonas syringae pvmaculicola hypothetical protein TR:AAK49553 (EMBL:AF359557) (126 aa) fasta scores: E(): 2.7e-25, 58.62% id in 116 aa and to Rhizobium meliloti hypothetical signal peptide protein Smc01418 TR:CAC46680 (EMBL:AL591789) (124 aa) fasta scores: E(): 5.3e-19, 48.36% id in 122 aa
NP_881498.1	nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription
NP_881499.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa1044 TR:Q9I4T0 (EMBL:AE004536) (154 aa) fasta scores: E(): 2e-14, 43.05% id in 144 aa
NP_881500.1	Similar to Bacillus halodurans Bh3119 protein TR:Q9K887 (EMBL:AP001517) (134 aa) fasta scores: E(): 2.8e-27, 50.39% id in 127 aa, and to Rhizobium meliloti hypothetical protein Smc01879 TR:Q92NM9 (EMBL:AL591789) (134 aa) fasta scores: E(): 5.2e-26, 53.54% id in 127 aa
NP_881501.1	Similar to Salmonella enterica subsp enterica serovar Typhi possible lipoprotein Sty3194 TR:CAD02868 (EMBL:AL627277) (250 aa) fasta scores: E(): 1.8e-19, 37.44% id in 243 aa and to Pseudomonas aeruginosa lipoprotein NlpD/LppB homolog precursor Pa3623 SW:NLPD_PSEAE (P45682) (297 aa) fasta scores: E(): 1.1e-18, 39.1% id in 289 aa
NP_881502.1	Similar to Pseudomonas aeruginosa probable transporter Pa4289 TR:Q9HWB1 (EMBL:AE004845) (401 aa) fasta scores: E(): 4.4e-72, 59.55% id in 403 aa and to Bacillus halodurans chromate transporter ChrA or Bh0574 TR:Q9KFB1 (EMBL:AP001509) (397 aa) fasta scores: E(): 2e-59, 50.9% id in 387 aa
NP_881503.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa0435 TR:Q9I682 (EMBL:AE004480) (492 aa) fasta scores: E(): 1.8e-84, 51.11% id in 495 aa
NP_881504.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa0434 TR:Q9I683 (EMBL:AE004480) (730 aa) fasta scores: E(): 7.2e-136, 49.52% id in 737 aa, and to Escherichia coli ferrichrome-iron receptor precursor FhuA or TonA or b0150 SW:FHUA_ECOLI (P06971) (747 aa) fasta scores: E(): 3.7e-14, 22.9% id in 786 aa
NP_881505.1	no significant database hits
NP_881506.1	Weakly similar to Burkholderia solanacearum probable signal peptide protein Rsp1034 TR:CAD18185 (EMBL:AL646082) (89 aa) fasta scores: E(): 2e-07, 49.33% id in 75 aa
NP_881507.1	Similar to Rhizobium meliloti hypothetical protein Smb20529 TR:CAC48908 (EMBL:AL603643) (309 aa) fasta scores: E(): 3.9e-53, 52.76% id in 271 aa and to Caulobacter crescentus hypothetical protein Cc3255 TR:Q9A3E9 (EMBL:AE005989) (280 aa) fasta scores: E(): 1.2e-44, 48.14% id in 270 aa
NP_881508.1	Weakly similar to Rhizobium meliloti hypothetical protein Smb20528 TR:CAC48907 (EMBL:AL603643) (266 aa) fasta scores: E(): 3.4e-19, 35.08% id in 248 aa and to Caulobacter crescentus hypothetical protein Cc3256 TR:Q9A3E8 (EMBL:AE005989) (254 aa) fasta scores: E(): 3.3e-14, 33.07% id in 254 aa
NP_881509.1	Similar in parts to Caulobacter crescentus hypothetical protein Cc3257 TR:Q9A3E7 (EMBL:AE005989) (150 aa) fasta scores: E(): 4.7e-15, 46.66% id in 135 aa and to Rhizobium meliloti hypothetical protein Smb20527 TR:CAC48906 (EMBL:AL603643) (144 aa) fasta scores: E(): 8.9e-12, 38.88% id in 144 aa
NP_881510.1	Similar to many  membrane transport proteins including: Streptomyces avermitilis MFS transporter protein TR:BAB69375 (EMBL:AB070955) (465 aa) fasta scores: E(): 6e-81, 54.64% id in 463 aa and to Nocardia lactamdurans cephamycin export protein CmcT SW:CMCT_NOCLA (Q04733) (486 aa) fasta scores: E(): 7.3e-42, 38.28% id in 465 aa
NP_881511.1	Similar to several  ArsR-family regulatory proteins including: Rhizobium meliloti regulator NitR TR:Q9AH16 (EMBL:AF323118) (123 aa) fasta scores: E(): 1.4e-10, 44.89% id in 98 aa and Rhizobium loti probable regulatory protein Mlr2511 TR:Q98I91 (EMBL:AP002999) (118 aa) fasta scores: E(): 2.7e-11, 45.09% id in 102 aa
NP_881512.1	Similar to Escherichia coli cytochrome O ubiquinol oxidase CyoD or b0429 or z0532 or Ecs0483 SW:CYOD_ECOLI (P18403) (109 aa) fasta scores: E(): 3.1e-15, 47.27% id in 110 aa and to Pseudomonas putida cytochrome O ubiquinol oxidase CyoD SW:CYOD_PSEPU (Q9WWR4) (110 aa) fasta scores: E(): 4.2e-15, 43.92% id in 107 aa
NP_881513.1	Similar to Escherichia coli cytochrome O ubiquinol oxidase subunit III CyoC or b0430 SW:CYOC_ECOLI (P18402) (204 aa) fasta scores: E(): 1.9e-47, 60.29% id in 204 aa and to Pseudomonas putida cytochrome O ubiquinol oxidase subunit III CyoC SW:CYOC_PSEPU (Q9WWR3) (207 aa) fasta scores: E(): 4.6e-49, 61.57% id in 203 aa
NP_881514.1	Similar to Escherichia coli cytochrome O ubiquinol oxidase polypeptide I CyoB or B0431 or Z0534 or Ecs0485 SW:CYOB_ECOLI (P18401) (663 aa) fasta scores: E(): 4.1e-193, 70.27% id in 656 aa and to Pseudomonas putida ubiquinol oxidase polypeptide I CyoB SW:CYOB_PSEPU (Q9WWR2) (672 aa) fasta scores: E(): 7.3e-181, 66.92% id in 659 aa
NP_881515.1	Similar to Escherichia coli ubiquinol oxidase polypeptide II precursor CyoA or B0432 SW:CYOA_ECOLI (P18400) (315 aa) fasta scores: E(): 1.1e-59, 55.19% id in 279 aa and to Pseudomonas putida ubiquinol oxidase polypeptide II precursor CyoA SW:CYOA_PSEPU (Q9WWR1) (314 aa) fasta scores: E(): 2.5e-61, 54.15% id in 301 aa. Also similar to BP2731, 50.000% identity (52.107% ungapped) in 272 aa overlap.
NP_881516.1	Similar to many two component system response regulators including: Xylella fastidiosa two-component system, regulatory protein Xf2578 TR:Q9PAE0 (EMBL:AE004064) (192 aa) fasta scores: E(): 6.1e-40, 66.66% id in 177 aa and to Rhodovulum sulfidophilum photosynthetic apparatus regulatory protein RegA SW:REGA_RHOSU (O82868) (183 aa) fasta scores: E(): 1e-20, 43.93% id in 173 aa
NP_881517.1	Similar to many two component system histidine kinases including: Xylella fastidiosa two-component system Xf2577 TR:Q9PAE1 (EMBL:AE004064) (405 aa) fasta scores: E(): 2.1e-72, 52.76% id in 398 aa and to Rhodobacter sphaeroides sensor histidine kinase RegB or PrrB SW:REGB_RHOSH (Q53068) (462 aa) fasta scores: E(): 1.6e-15, 29.06% id in 406 aa
NP_881518.1	no significant database hits
NP_881519.1	Similar to Yersinia pestis conserved hypothetical protein Ypo2149 TR:CAC90958 (EMBL:AJ414151) (289 aa) fasta scores: E(): 7.6e-78, 67.24% id in 287 aa and to Salmonella typhimurium LT2  cytoplasmic protein Stm0951 TR:AAL19886 (EMBL:AE008740) (286 aa) fasta scores: E(): 1.7e-74, 65.15% id in 287 aa
NP_881520.1	Similar to many  transcriptional regulators e.g. Rhizobium meliloti  transcriptional activator Sma1933 TR:AAK65718 (EMBL:AE007292) (204 aa) fasta scores: E(): 2.1e-26, 51.38% id in 181 aa. Note that the BP2939 lacks the first ~25 aa possessed by almost all of the database hits.
NP_881521.1	Similar to many  membrane transport proteins including: Rhizobium meliloti  transmembrane transport protein Sma1937 TR:AAK65720 (EMBL:AE007292) (412 aa) fasta scores: E(): 5.7e-47, 43.87% id in 392 aa and to Pseudomonas aeruginosa probable MFS transporter Pa3718 TR:Q9HXS3 (EMBL:AE004791) (413 aa) fasta scores: E(): 1.6e-33, 36.95% id in 387 aa
NP_881522.1	Similar to Streptomyces coelicolor  racemase Sc5f2a.13 TR:Q9X7N6 (EMBL:AL049587) (398 aa) fasta scores: E(): 1e-70, 55.22% id in 364 aa, and to Mycobacterium tuberculosis CDC1551 fatty acid-coA racemase Mt1176 TR:AAK45435 (EMBL:AE006996) (395 aa) fasta scores: E(): 3.7e-69, 51.16% id in 387 aa
NP_881523.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa1826 TR:Q9I2R9 (EMBL:AE004609) (301 aa) fasta scores: E(): 5.4e-29, 39% id in 300 aa and to Bacillus subtilis Als operon regulatory protein AlsR SW:ALSR_BACSU (Q04778) (302 aa) fasta scores: E(): 3.4e-25, 34% id in 250 aa
NP_881524.1	Similar to several proteins of undefined function e.g. Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 8.5e-43, 42.02% id in 326 aa and to Rhizobium meliloti hypothetical protein Sma1927 TR:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 5e-40, 38.58% id in 324 aa
NP_881525.1	Weakly similar to Sulfolobus tokodaii hypothetical protein St0068 TR:BAB65025 (EMBL:AP000981) (165 aa) fasta scores: E(): 4.8e-09, 30.87% id in 149 aa and to Rhodococcus sp NCIMB 9784 FAD-binding protein CampD TR:AAK50623 (EMBL:AF323755) (167 aa) fasta scores: E(): 1.2e-07, 32.41% id in 145 aa
NP_881526.1	Similar to several  transcriptional regulators including: Pseudomonas aeruginosa probable transcriptional regulator Pa0279 TR:Q9I6L1 (EMBL:AE004466) (232 aa) fasta scores: E(): 4.6e-34, 46.94% id in 213 aa and to Caulobacter crescentus transcriptional regulator Cc3070 TR:Q9A3Y1 (EMBL:AE005970) (234 aa) fasta scores: E(): 9e-28, 43.98% id in 216 aa
NP_881527.1	transposase for IS481 element
NP_881528.1	Similar to Escherichia coli riboflavin biosynthesis protein (diamino hydroxyphospho ribosylaminopyrimidine deaminase) RibD or RibG or b0414 SW:RIBD_ECOLI (P25539) (367 aa) fasta scores: E(): 1.6e-50, 46.46% id in 368 aa and to Xylella fastidiosa riboflavin-specific deaminase Xf0950 TR:Q9PES8 (EMBL:AE003934) (364 aa) fasta scores: E(): 1.1e-53, 48.77% id in 367 aa
NP_881529.1	Similar in parts to several including: Agrobacterium tumefaciens TR:AAK86081 (EMBL:AE007965) (239 aa) fasta scores: E(): 1.6e-18, 50.82% id in 183 aa and to Pseudomonas aeruginosa hypothetical protein Pa1677TR:Q9I348 (EMBL:AE004595) (198 aa) fasta scores: E(): 1.9e-07, 30.47% id in 210 aa
NP_881530.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa4057 SW:Y4F7_PSEAE (Q9HWX1) (154 aa) fasta scores: E(): 4.9e-29, 52.38% id in 147 aa and to Vibrio cholerae hypothetical protein Vc2272 SW:YM72_VIBCH (Q9KPU0) (149 aa) fasta scores: E(): 6.4e-29, 54.73% id in 148 aa
NP_881531.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
NP_881532.1	Similar to Thauera aromatica ypothetical protein BbsI TR:Q9KJE6 (EMBL:AF173961) (209 aa) fasta scores: E(): 2.9e-49, 58.04% id in 205 aa and to Xylella fastidiosa hypothetical protein Xf2170 TR:Q9PBH4 (EMBL:AE004031) (204 aa) fasta scores: E(): 7.3e-40, 50.24% id in 205 aa
NP_881533.1	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
NP_881534.1	transposase for IS481 element
NP_881535.1	Weakly similar to several including: Pseudomonas aeruginosa hypothetical protein Pa0667 TR:Q9I5Q4 (EMBL:AE004501) (447 aa) fasta scores: E(): 5.2e-42, 39.83% id in 369 aa and to Neisseria meningitidis hypothetical protein Nmb0315 TR:Q9K163 (EMBL:AE002388) (430 aa) fasta scores: E(): 2.4e-35, 32.8% id in 445 aa
NP_881536.1	catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling
NP_881537.1	essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors
NP_881538.1	Weakly similar in parts to Pseudomonas aeruginosa hypothetical protein Pa0663 TR:Q9I5Q8 (EMBL:AE004501) (239 aa) fasta scores: E(): 9.1e-06, 28.82% id in 222 aa
NP_881539.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate
NP_881540.1	forms a direct contact with the tRNA during translation
NP_881541.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
NP_881542.1	Similar to many proposed extracellular solute binding proteins including: Rhodobacter sphaeroides periplasmic mannitol-binding protein SmoM TR:O30835 (EMBL:AF018073) (365 aa) fasta scores: E(): 1.4e-78, 52.87% id in 365 aa and to Rhodobacter capsulatus C4-dicarboxylate-binding periplasmic protein precursor DctP SW:DCTP_RHOCA (P37735) (333 aa) fasta scores: E(): 9.7e-05, 21.53% id in 325 aa
NP_881543.1	Similar to several proteins of the PmbA/TldD family including: Pseudomonas aeruginosa PmbA protein TR:Q9HVU9 (EMBL:AE004861) (449 aa) fasta scores: E(): 1e-82, 52.86% id in 437 aa, and to Escherichia coli PmbA protein thought to be involved with secretion and maturation of microcin B17 (TldE or b4235 or z5845 or Ecs5212) SW:PMBA_ECOLI (P24231) (450 aa) fasta scores: E(): 2.7e-77, 49.66% id in 445 aa
NP_881544.1	Weakly similar to several proteins of undefined function including: Pasteurella multocida hypothetical protein Pm0119 TR:Q9CPC8 (EMBL:AE006047) (180 aa) fasta scores: E(): 1.8e-18, 44.02% id in 159 aa and to Vibrio cholerae hypothetical protein Vc2536 TR:Q9KP43 (EMBL:AE004323) (193 aa) fasta scores: E(): 5.7e-16, 41.11% id in 180 aa
NP_881545.1	Similar to many carboxylesterases including: Xylella fastidiosa Xf1624 TR:Q9PCY0 (EMBL:AE003989) (224 aa) fasta scores: E(): 1.5e-37, 49.53% id in 216 aa and to Pseudomonas fluorescens EstA SW:EST1_PSEFL (Q51758) (218 aa) fasta scores: E(): 2.9e-26, 41.31% id in 213 aa
NP_881546.1	Similar to Clostridium acetobutylicum nitrate ABC transporter ATP binding protein Cac0619 TR:Q97LE3 (EMBL:AE007577) (253 aa) fasta scores: E(): 2e-42, 48.42% id in 254 aa, and to Bacillus subtilis  transporter YtlC TR:O34314 (EMBL:AF008220) (260 aa) fasta scores: E(): 2.9e-38, 47.58% id in 248 aa
NP_881547.1	Similar to Clostridium acetobutylicum uncharacterised permease Cac0618 TR:Q97LE4 (EMBL:AE007577) (264 aa) fasta scores: E(): 3.7e-38, 40.99% id in 261 aa and to Pseudomonas aeruginosa probable permease of ABC transporter Pa3512 TR:Q9HY97 (EMBL:AE004771) (258 aa) fasta scores: E(): 1.9e-19, 32.5% id in 240 aa
NP_881548.1	Similar to many proteins of undefined function including: Rhizobium loti Mlr4169 protein TR:Q98EN3 (EMBL:AP003003) (223 aa) fasta scores: E(): 5.1e-11, 32.74% id in 226 aa, and to Streptomyces coelicolor hydrolase Scd65.07C TR:Q9F2S5 (EMBL:AL392176) (224 aa) fasta scores: E(): 1.2e-07, 28.76% id in 226 aa
NP_881549.1	Similar to Streptomyces coelicolor conserved hypothetical protein Scf76.17 TR:Q9RJF7 (EMBL:AL121600) (130 aa) fasta scores: E(): 6.3e-27, 58.91% id in 129 aa, and to Bacillus subtilis YurT protein TR:O32161 (EMBL:Z99120) (127 aa) fasta scores: E(): 3.4e-25, 57.93% id in 126 aa
NP_881550.1	exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA
NP_881551.1	Similar to several including: Bacillus halodurans Bh2161 protein TR:Q9KAX5 (EMBL:AP001514) (477aa) fasta scores: E(): 1.3e-38, 51.11% id in 493 aa, and to Bacillus subtilis hypothetical 48.8 kDa protein YhfA TR:O07599 (EMBL:Y14083) (463 aa) fasta scores: E(): 2e-17, 33.8% id in 497 aa. Also highly similar to BP0358, 65.339% identity in 502 aa overlap.
NP_881552.1	Similar to several including: Streptomyces coelicolor  GntR-family transcriptional regulator Scgd3.11C TR:Q9XA67 (EMBL:AL096822) (216 aa) fasta scores: E(): 3.1e-14, 36.09% id in 205 aa and to Acinetobacter calcoaceticus transcriptional repressor MdcY TR:Q9F0Q8 (EMBL:AF209728) (224 aa) fasta scores: E(): 1.7e-13, 35.35% id in 198 aa
NP_881553.1	transposase for IS481 element
NP_881554.1	Similar to several proteins of undefined function e.g. Escherichia coli O157:H7 hypothetical 52.7 kDa protein Ecs3450 TR:BAB36873 (EMBL:AP002562) (484 aa) fasta scores: E(): 4.1e-28, 32% id in 475 aa
NP_881555.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
NP_881556.1	Similar to many proposed transport proteins e.g. Clostridium acetobutylicum permease, MDR related, probably tetracycline resistance protein Cap0124 TR:Q97TH7 (EMBL:AE001438) (393 aa) fasta scores: E(): 3e-22, 26.89% id in 357 aa and to Pseudomonas aeruginosa probable MFS transporter Pa3303 TR:Q9HYU1 (EMBL:AE004752) (391 aa) fasta scores: E(): 1.8e-13, 28.53% id in 382 aa
NP_881557.1	no significant database hits
NP_881558.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa4508 TR:Q9HVR3 (EMBL:AE004864) (157 aa) fasta scores: E(): 7.9e-21, 44% id in 150 aa and to Caulobacter crescentus leucine-responsive regulatory protein Cc0805 TR:Q9AA06 (EMBL:AE005757) (155 aa) fasta scores: E(): 2.7e-19, 44% id in 150 aa
NP_881559.1	Catalyzes the rate-limiting step in dNTP synthesis
NP_881560.1	Catalyzes the rate-limiting step in dNTP synthesis
NP_881561.1	Previously sequenced in Bordetella pertussis as histone H1 TR:Q45370 (EMBL:L37438) (182 aa) fasta scores: E(): 1.1e-39, 97.14% id in 175 aa
NP_881562.1	Similar to Escherichia coli hypothetical protein YggT or b2952 or z4297 or Ecs3828 SW:YGGT_ECOLI (P52058) (188 aa) fasta scores: E(): 3.3e-14, 35.75% id in 179 aa and to Vibrio cholerae hypothetical protein Vc0459 TR:Q9KUQ6 (EMBL:AE004132) (185 aa) fasta scores: E(): 4.9e-14, 38.69% id in 168 aa
NP_881563.1	Similar to Lactococcus lactis D-alanine activating enzyme DltA TR:Q9CG49 (EMBL:AE006358) (499 aa) fasta scores: E(): 6.8e-40, 32.8% id in 445 aa and to Bacillus subtilis D-alanine-activating enzyme DltA SW:DLTA_BACSU (P39581) (503 aa) fasta scores: E(): 1e-32, 36.99% id in 492 aa
NP_881564.1	Similar to Bacillus subtilis protein DltB thought to be involved in D-alanine transport SW:DLTB_BACSU (P39580) (395 aa) fasta scores: E(): 5.5e-25, 33.68% id in 282 aa, and to Lactococcus lactis peptidoglycan biosynthesis protein DltB TR:Q9CG50 (EMBL:AE006358) (407 aa) fasta scores: E(): 1.8e-23, 34.69% id in 245 aa
NP_881566.1	Similar to Staphylococcus xylosus DltD dltD SWALL:Q9X2N7 (EMBL:AF032440) (382 aa) fasta scores: E(): 3.8e-07, 21.71% id in 327 aa, and to Streptococcus agalactiae secreted protein, DltD dltD SWALL:Q8VM64 (EMBL:AJ291784) (420 aa) fasta scores: E(): 0.00019, 22.72% id in 330 aa
NP_881567.1	Similar to in regions to: Escherichia coli O157:H7 EDL933  acyl carrier protein z4853 TR:AAG58588 (EMBL:AE005571) (85 aa) fasta scores: E(): 0.0049, 37.03% id in 81 aa and to Bacillus subtilis D-alanyl carrier protein DltC SW:DLTC_BACSU (P39579) (78 aa) fasta scores: E(): 0.14, 30.5% id in 59 aa
NP_881568.1	Similar to many Pectobacterium carotovorum subspcarotovorum. outer membrane lipoprotein Pcp TR:Q9RB08 (EMBL:AF168687) (155 aa) fasta scores: E(): 3.6e-13, 40.64% id in 155 aa and to Salmonella typhimurium outer membrane lipoprotein SlyB SW:SLYB_SALTY (Q53549) (155 aa) fasta scores: E(): 8.1e-14, 40.64% id in 155 aa. Note the extended N-terminal region of the Bordetella orthologue.
NP_881569.1	Similar to Streptomyces coelicolor  kinase Sc6g10.31C TR:Q9X816 (EMBL:AL049497) (338 aa) fasta scores: E(): 1.2e-28, 35.69% id in 311 aa and in the C-terminal region to Haemophilus influenzae ribokinase RbsK or Hi0505 SW:RBSK_HAEIN (P44331) (306 aa) fasta scores: E(): 0.0005, 24.34% id in 267 aa
NP_881570.1	Weakly similar in parts to Pseudomonas aeruginosa hypothetical protein Pa4851 TR:Q9HUW2 (EMBL:AE004898) (421 aa) fasta scores: E(): 0.00026, 27.27% id in 418 aa
NP_881571.1	an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
NP_881572.1	composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism
NP_881573.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
NP_881574.1	Similar in parts to many thioredoxins e.g. Xylella fastidiosa thioredoxin Xf1990 TR:Q9PBZ5 (EMBL:AE004018) (211 aa) fasta scores: E(): 3.6e-12, 35.46% id in 141 aa and to Bradyrhizobium japonicum thiol:disulfide interchange protein TlpA SW:TLPA_BRAJA (P43221) (221 aa) fasta scores: E(): 1.9e-09, 34.1% id in 173 aa
NP_881575.1	Similar to Escherichia coli UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diami nopimelate ligase Mpl or b4233 SW:MPL_ECOLI (P37773) (457 aa) fasta scores: E(): 2.3e-91, 55.79% id in 457 aa, and to Pseudomonas aeruginosa UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diami nopimelate ligase Mpl or Pa4020 TR:Q9HX07 (EMBL:AE004818) (451 aa) fasta scores: E(): 1.7e-101, 60.83% id in 457 aa
NP_881576.1	Similar to Pseudomonas aeruginosa hypothetical protein PA4968 TR:Q9HUJ7 (EMBL:AE004909) (206 aa) fasta scores: E(): 2.5e-20, 42.56% id in 195 aa
NP_881577.1	Similar to Neisseria meningitidis hypothetical protein NMA2205 TR:Q9JSP1 (EMBL:AL162758) (635 aa) fasta scores: E(): 1.2e-70, 40.63% id in 598 aa, and to Neisseria meningitidis ribonuclease II-related protein NMB0282 TR:Q9K185 (EMBL:AE002385) (626 aa) fasta scores: E(): 9.7e-70, 40.13% id in 598 aa
NP_881578.1	Similar to Pseudomonas aeruginosa hypothetical protein PA0406 TR:Q9I698 (EMBL:AE004477) (319 aa) fasta scores: E(): 7.2e-18, 31.63% id in 294 aa
NP_881579.1	AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate
NP_881580.1	transposase for IS481 element
NP_881581.1	catalyzes the transfer of palmitate to lipid A
NP_881582.1	Similar to Rhizobium loti hypothetical protein MLL3532 TR:Q98G14 (EMBL:AP003002) (184 aa) fasta scores: E(): 1.2e-23, 48.12% id in 160 aa. Also similar to BP3250, 57.714% identity (57.714% ungapped) in 175 aa overlap.
NP_881583.1	Similar to Zymomonas mobilis glutamate uptake regulatory protein Grp SW:GRP_ZYMMO (P74996) (164 aa) fasta scores: E(): 1.1e-25, 51.67% id in 149 aa
NP_881584.1	Similar to Escherichia coli D-amino acid dehydrogenase small subunit DadA or DadR or B1189 or Z1952 or ECS1684 SW:DADA_ECOLI (P29011) (432 aa) fasta scores: E(): 1.2e-60, 41.62% id in 418 aa
NP_881585.1	Similar to Rhizobium meliloti  oxidoreductase SMC01157 TR:CAC41799 (EMBL:AL591783) (259 aa) fasta scores: E(): 3e-26, 39.01% id in 264 aa
NP_881586.1	Weakly similar to Pseudomonas aeruginosa hypothetical protein PA2602 TR:Q9I0N5 (EMBL:AE004689) (201 aa) fasta scores: E(): 2.8e-08, 28.57% id in 133 aa. Also similar to BP2871, 45.562% identity (47.531% ungapped) in 169 aa overlap.
NP_881587.1	Similar to Rhizobium meliloti conserved hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.3e-40, 39.02% id in 328 aa
NP_881588.1	Poor database matches. Weakly similar to the N-terminal regions of Agrobacterium tumefaciens hypothetical protein AGR_C_2627p TR:AAK87216 (EMBL:AE008068) (292 aa) fasta scores: E(): 0.0046, 28.75% id in 240 aa, and Rhizobium loti hypothetical protein MLR0372 TR:Q98MZ7 (EMBL:AP002994) (296 aa) fasta scores: E(): 0.018, 25.45% id in 220 aa
NP_881589.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins
NP_881590.1	Similar to Shewanella violacea hypothetical protein YebA TR:Q9F1M5 (EMBL:AB052554) (299 aa) fasta scores: E(): 1.6e-20, 37.33% id in 233 aa, and to Xylella fastidiosa hypothetical protein XF0805 TR:Q9PF73 (EMBL:AE003920) (319 aa) fasta scores: E(): 5e-21, 36.13% id in 238 aa
NP_881591.1	Poor database matches. Similar to Neisseria meningitidis hypothetical protein NMA1734 TR:Q9JTK8 (EMBL:AL162757) (140 aa) fasta scores: E(): 0.01, 29% id in 131 aa
NP_881592.1	zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis
NP_881593.1	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function
NP_881594.1	Similar to Escherichia coli cell division protein FtsA or DivA or B0094 or Z0104 or ECS0098 SW:FTSA_ECOLI (P06137) (420 aa) fasta scores: E(): 5.2e-64, 45.76% id in 413 aa, and to Pseudomonas aeruginosa cell division protein FtsA or PA4408 SW:FTSA_PSEAE (P47203) (417 aa) fasta scores: E(): 5.2e-86, 58.16% id in 404 aa
NP_881595.1	Similar to Pseudomonas aeruginosa  cell division protein FtsQ or PA4409 TR:Q9LCT5 (EMBL:U19797) (287 aa) fasta scores: E(): 7e-19, 32.12% id in 249 aa, and to Escherichia coli cell division protein FtsQ or B0093 SW:FTSQ_ECOLI (P06136) (276 aa) fasta scores: E(): 2.3e-14, 29.32% id in 266 aa
NP_881596.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
NP_881597.1	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
NP_881598.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
NP_881599.1	Similar to Escherichia coli cell division protein FtsW or B0089 or Z0099 or ECS0093 SW:FTSW_ECOLI (P16457) (414 aa) fasta scores: E(): 6.3e-53, 40.63% id in 379 aa
NP_881600.1	UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation
NP_881601.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NP_881602.1	fused protein. N-terminal region is similar to Escherichia coli UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimela te ligase MurE SW:MURE_ECOLI (P22188) (494 aa) fasta scores: E(): 2e-41, 42.77% id in 491 aa. C-terminal region is similar to to Escherichia coli UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate --D-alanyl-D-alanyl ligase MurF SW:MURF_ECOLI (P11880) (452 aa) fasta scores: E(): 6.5e-52, 42.55% id in 430 aa. Possibly bifunctional, catalysing the last two steps in the synthesis of UDP-N-acetylmuramyl-pentapeptide
NP_881603.1	Similar to Escherichia coli peptidoglycan synthetase FtsI precursor or PbpB or B0084 or Z0094 or ECS0088 SW:FTSI_ECOLI (P04286) (588 aa) fasta scores: E(): 2.7e-79, 43.27% id in 550 aa, and to Neisseria gonorrhoeae penicillin-binding protein 2 PenA SW:PBP2_NEIGO (P08149) (581 aa) fasta scores: E(): 1.7e-86, 41.23% id in 553 aa
NP_881604.1	Similar to Escherichia coli cell division protein FtsL or MraR or B0083 or Z0093 or ECS0087 SW:FTSL_ECOLI (P22187) (121 aa) fasta scores: E(): 0.005, 29.11% id in 79 aa
NP_881605.1	Similar to Escherichia coli hypothetical protein YabC or B0082 or Z0092 or ECS0086 SW:YABC_ECOLI (P18595) (313 aa) fasta scores: E(): 2.3e-52, 52.94% id in 289 aa, and to Neisseria meningitidis hypothetical protein NMA2074 TR:Q9JSY9 (EMBL:AL162758) (328 aa) fasta scores: E(): 2.7e-59, 58.74% id in 303 aa
NP_881606.1	MraZ; UPF0040; crystal structure shows similarity to AbrB
NP_881607.1	Similar to Escherichia coli ABC transporter ATP-binding protein Uup or B0949 SW:UUP_ECOLI (P43672) (635 aa) fasta scores: E(): 9.7e-71, 46.03% id in 630 aa, and to Caulobacter crescentus holdfast attachment protein C HfaC or CC2631 SW:HFAC_CAUCR (Q45978) (608 aa) fasta scores: E(): 2.7e-62, 42.88% id in 611 aa
NP_881608.1	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis
NP_881609.1	Similar to Rhizobium meliloti  hippurate hydrolase TR:CAC45132 (EMBL:AL591784) (389 aa) fasta scores: E(): 1.6e-72, 52.52% id in 377 aa
NP_881610.1	Similar to Chlamydia muridarum hypothetical protein TC0745 TR:Q9PJT3 (EMBL:AE002343) (86 aa) fasta scores: E(): 5.8e-15, 54.21% id in 83 aa
NP_881612.1	Similar to Escherichia coli, leucine-responsive regulatory protein Lrp or AlsB or LivR or Ihb or OppI or B0889 or Z1234 or ECD0974 SW:LRP_ECOLI (P19494) (163 aa) fasta scores: E(): 3.6e-23, 44.23% id in 156 aa, and to Neisseria meningitidis  AsnC-family transcriptional regulator NMA0756 TR:Q9JVP4 (EMBL:AL162754) (160 aa) fasta scores: E(): 4.1e-25, 46.15% id in 156 aa
NP_881613.1	Similar to Vibrio vulnificus hemolysin VllY SW:VLLY_VIBVU (O06695) (357 aa) fasta scores: E(): 9.6e-47, 56.78% id in 361 aa, and to Pseudomonas aeruginosa 4-hydroxyphenylpyruvate dioxygenase Hpd or PA0865 TR:Q9I576 (EMBL:AE004521) (357 aa) fasta scores: E(): 6.5e-54, 57.61% id in 361 aa
NP_881614.1	this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress
NP_881615.1	Similar to Nitrosomonas europaea Cytochrome c-552 precursor Cyt SW:C552_NITEU (P95339) (103 aa) fasta scores: E(): 8.4e-16, 53.46% id in 101 aa
NP_881616.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
NP_881617.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
NP_881618.1	transposase for IS481 element
NP_881619.1	Similar to Neisseria meningitidis (serogroup A) hypothetical protein NMA0377 or NMB2058 TR:Q9JRG6 (EMBL:AL162753) (101 aa) fasta scores: E(): 3.7e-05, 35.05% id in 97 aa
NP_881620.1	Low similarity to N-teminal region of Mycobacterium tuberculosis hypothetical protein RV2229c or MT2288 or MTCY427.10c SW:YM29_MYCTU (Q10513) (245 aa) fasta scores: E(): 0.32, 30.51% id in 154 aa
NP_881621.1	transposase for IS481 element
NP_881622.1	Similar to Agrobacterium tumefaciens AGR_C_182p TR:AAK85937 (EMBL:AE007953) (153 aa) fasta scores: E(): 2.8e-11, 35.33% id in 133 aa
NP_881623.1	Similar to Agrobacterium tumefaciens Agr_c_184p TR:AAK85938 (EMBL:AE007953) (501 aa) fasta scores: E(): 5.5e-122, 65.86% id in 501 aa, and to Rhizobium meliloti conserved hypothetical protein SMB20027 TR:CAC48430 (EMBL:AL603642) (501 aa) fasta scores: E(): 1.1e-121, 65.26% id in 501 aa. Also similar to BP3869, 42.886% identity (43.776% ungapped) in 492 aa overlap.
NP_881624.1	Similar to Mycobacterium tuberculosis CDC1551 gamma-glutamyltransferase MT0797 TR:AAK45039 (EMBL:AE006970) (512 aa) fasta scores: E(): 4.2e-112, 56.73% id in 520 aa, and to Pseudomonas sp acylase AcyI SW:PAC1_PSES3 (P15557) (557 aa) fasta scores: E(): 5.3e-37, 33.03% id in 557 aa
NP_881625.1	Similar to Escherichia coli 2-hydroxy-3-oxopropionate reductase GlxR SW:GLXR_ECOLI (P77161) (292 aa) fasta scores: E(): 4.5e-25, 34.54% id in 275 aa, and to Rhizobium meliloti  oxidoreductase SMC00133 TR:CAC46456 (EMBL:AL591788) (289 aa) fasta scores: E(): 2.1e-70, 69.56% id in 276 aa. CDS is truncated at the N-terminus in comparison to similar proteins. Similarity extends beyond the predicted translational start, however no start codons exsist
NP_881626.1	transposase for IS481 element
NP_881627.1	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NP_881628.1	Similar to Escherichia coli  ATP-dependent RNA helicase RhlE SW:RHLE_ECOLI (P25888) (454 aa) fasta scores: E(): 9.2e-52, 43.36% id in 475 aa, and to Escherichia coli cold-shock DeaD-box protein A DeaD SW:DEAD_ECOLI (P23304) (628 aa) fasta scores: E(): 2.1e-47, 40.5% id in 511 aa. CDS contains an imperfect internal repeat (hexamer x15), residues 423 to 542. Similarity in the repeat region is poor
NP_881629.1	Similar to Neisseria meningitidis hypothetical protein NMA2076 TR:Q9JSY7 (EMBL:AL162758) (405 aa) fasta scores: E(): 2.8e-46, 40.49% id in 405 aa
NP_881630.1	catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity
NP_881631.1	Similar to Escherichia coli soluble lytic murein transglycosylase precursor Slt SW:SLT_ECOLI (645 aa) fasta scores: E(): 1.4e-22, 23.39% id in 607 aa, and to Neisseria meningitidis  transglycosylase NMA0503 TR:Q9JW81 (EMBL:AL162753) (616 aa) fasta scores: E(): 9e-47, 36.42% id in 582 aa. Possible alternative translational start sites
NP_881632.1	Similar to Rhizobium meliloti conserved hypothetical protein SMC02594 TR:CAC41462 (EMBL:AL591782) (222 aa) fasta scores: E(): 1.2e-14, 34.42% id in 183 aa, and to Escherichia coli hypothetical protein YgfA SW:YGFA_ECOLI () (182 aa) fasta scores: E(): 1.5e-07, 29.84% id in 191 aa
NP_881633.1	Similar to Streptomyces coelicolor  integral membrane transport protein 2SCG2.23 TR:Q9EX30 (EMBL:AL445963) (478 aa) fasta scores: E(): 3.6e-57, 42.82% id in 418 aa, and to Escherichia coli shikimate transporter ShiA SW:SHIA_ECOLI (438 aa) fasta scores: E(): 2.2e-52, 36.96% id in 422 aa
NP_881634.1	Similar to Rhizobium loti acetylpolyamine aminohydrolase MLL0103 TR:Q98NK3 (EMBL:AP002994) (342 aa) fasta scores: E(): 3.3e-59, 44.67% id in 338 aa, and to Mycoplana ramosa acetylpolyamine aminohydrolase AphA SW:APHA_MYCRA (EMBL:D10463) (341 aa) fasta scores: E(): 2.5e-43, 36.65% id in 341 aa
NP_881635.1	Similar to Rhizobium meliloti  transcriptional regulator, LysR family protein, SMB21180 TR:CAC49246 (EMBL:AL603645) (317 aa) fasta scores: E(): 1.2e-32, 36.89% id in 290 aa, and to Chromatium vinosum rubisco operon transcriptional regulator RbcR SW:RBCR_CHRVI (EMBL:M64032) (302 aa) fasta scores: E(): 2.1e-12, 26.4% id in 284 aa
NP_881636.1	transposase for IS481 element
NP_881637.1	Similar to Pseudomonas aeruginosa 5,10-methylenetetrahydrofolate reductase MetF or PA0430 TR:Q9I687 (EMBL:AE004480) (290 aa) fasta scores: E(): 3.4e-64, 60.93% id in 279 aa, and to Escherichia coli 5,10-methylenetetrahydrofolate reductase MetF SW:METF_ECOLI (EMBL:V01502) (296 aa) fasta scores: E(): 1.2e-36, 40.97% id in 266 aa
NP_881638.1	Similar to Synechocystis sp hypothetical protein SLR0284 TR:P74406 (EMBL:D90914) (116 aa) fasta scores: E(): 3.2e-13, 44.64% id in 112 aa, and to Streptomyces coelicolor hypothetical protein SCQ11.05c SW:YPT3_STRCO (EMBL:U37580) (125 aa) fasta scores: E(): 6.8e-09, 42.1% id in 114 aa
NP_881639.1	catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine
NP_881640.1	Similar to Caulobacter crescentus glycosyl transferase, group 1 family protein CC3345 TR:Q9A361 (EMBL:AE005996) (363 aa) fasta scores: E(): 2.1e-58, 47.8% id in 341 aa, and to Rhizobium loti probable glycosyl transferase MLR2668 TR:Q98HX4 (EMBL:AP003000) (340 aa) fasta scores: E(): 6.9e-56, 48.62% id in 327 aa
NP_881641.1	Similar to Escherichia coli hypothetical protein YdhL SW:YDHL_ECOLI (P76188) (125 aa) fasta scores: E(): 0.039, 36.17% id in 94 aa. C-terminal region is similar to Pseudomonas aeruginosa hypothetical protein PA1788 TR:Q9I2V4 (EMBL:AE004604) (155 aa) fasta scores: E(): 6.1e-05, 51.11% id in 45 aa
NP_881642.1	methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
NP_881643.1	Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA
NP_881644.1	Similar to Neisseria meningitidis HtrB/MsbB family protein NMB1418 TR:Q9JYV2 (EMBL:AE002491) (289 aa) fasta scores: E(): 1.2e-32, 35.14% id in 276 aa, and to Escherichia coli lipid A biosynthesis lauroyl acyltransferase HtrB SW:HTRB_ECOLI (EMBL:X61000) (306 aa) fasta scores: E(): 4.5e-28, 34.19% id in 272 aa
NP_881645.1	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate
NP_881646.1	Similar to Xylella fastidiosa hypothetical protein XF1482 TR:Q9PD97 (EMBL:AE003977) (226 aa) fasta scores: E(): 6.6e-13, 32.27% id in 220 aa
NP_881647.1	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs
NP_881648.1	Similar to Neisseria meningitidis  outer-membrane receptor protein NMA1161 TR:Q9JUS2 (EMBL:AL162755) (764 aa) fasta scores: E(): 2e-34, 35.94% id in 740 aa
NP_881649.1	Similar to Rhizobium meliloti hypothetical transmembrane protein SMC02986 TR:CAC47457 (EMBL:AL591792) (344 aa) fasta scores: E(): 2.4e-23, 44.54% id in 330 aa
NP_881650.1	Similar to Rhizobium meliloti conserved hypothetical protein SMC02985 TR:CAC47456 (EMBL:AL591792) (214 aa) fasta scores: E(): 2.1e-09, 27.91% id in 197 aa
NP_881651.1	Similar to Rhizobium loti ABC transporter periplasmic binding protein MLL8313 TR:Q983I7 (EMBL:AP003013) (313 aa) fasta scores: E(): 8.5e-44, 44.72% id in 313 aa, and to Neisseria meningitidis adhesin,  NMB0586 TR:Q9K0K8 (EMBL:AE002414) (304 aa) fasta scores: E(): 2.5e-41, 42.12% id in 311 aa
NP_881652.1	Similar to Rhizobium loti ABC transporter permease MLL8314 TR:Q983I6 (EMBL:AP003013) (291 aa) fasta scores: E(): 6.8e-52, 59.85% id in 269 aa, and to Neisseria meningitidis membrane protein NMB0587 TR:Q9K0K7 (EMBL:AE002415) (291 aa) fasta scores: E(): 5.7e-51, 55.05% id in 287 aa
NP_881653.1	Similar to Rhizobium loti ABC transporter ATP-binding protein MLL8315 TR:Q983I5 (EMBL:AP003013) (272 aa) fasta scores: E(): 3.5e-36, 51.73% id in 230 aa, and to Neisseria meningitidis ABC transporter ATP-binding protein NMB0588 TR:Q9K0K6 (EMBL:AE002415) (251 aa) fasta scores: E(): 2.5e-29, 47.11% id in 225 aa
NP_881654.1	Similar to Pseudomonas aeruginosa transcriptional regulator NP20 or PA5499 TR:Q9HT74 (EMBL:AE004962) (167 aa) fasta scores: E(): 6.6e-17, 37.34% id in 158 aa, and to Escherichia coli zinc uptake regulation protein Zur SW:ZUR_ECOLI (EMBL:U00006) (171 aa) fasta scores: E(): 8.2e-16, 37.41% id in 155 aa
NP_881655.1	Similar to Caulobacter crescentus hypothetical protein CC0321 TR:Q9ABB0 (EMBL:AE005705) (365 aa) fasta scores: E(): 9.5e-60, 47.79% id in 362 aa.
NP_881656.1	Similar to Neisseria meningitidis  dnaK suppressor protein DksA or NMA0213 TR:Q9JWW3 (EMBL:AL162752) (138 aa) fasta scores: E(): 2.9e-26, 61.19% id in 134 aa, and to Escherichia coli dnaK suppressor protein DksA or B0145 or Z0156 or ECS0149SW:DKSA_ECOLI (EMBL:M34945) (151 aa) fasta scores: E(): 2e-14, 37.06% id in 143 aa
NP_881657.1	heat shock protein involved in degradation of misfolded proteins
NP_881658.1	heat shock protein involved in degradation of misfolded proteins
NP_881659.1	Similar to Agrobacterium tumefaciens hypothetical protein Agr_l_1727p TR:AAK89437 (EMBL:AE008284) (94 aa) fasta scores: E(): 9.9e-08, 43.67% id in 87 aa
NP_881660.1	Similar to Pseudomonas aeruginosa hypothetical protein PA4399 TR:Q9HW07 (EMBL:AE004855) (192 aa) fasta scores: E(): 1.4e-26, 48.95% id in 192 aa. Similar to BP0266, BP1766, BP2719, BP3683, and BP3731
NP_881661.1	transposase for IS481 element
NP_881662.1	Similar to Neisseria meningitidis phopholipase D-family protein NMA1646 TR:Q9JTT1 (EMBL:AL162756) (525 aa) fasta scores: E(): 5.7e-86, 49.51% id in 519 aa
NP_881663.1	Similar to Azotobacter vinelandii molybdenum transport ATP-binding protein ModD SW:MODD_AZOVI (EMBL:X69077) (380 aa) fasta scores: E(): 8.8e-76, 65.92% id in 358 aa
NP_881664.1	Similar to Azotobacter vinelandii molybdenum transport system permease ModC SW:MODC_AZOVI (EMBL:X69077) (226 aa) fasta scores: E(): 2.1e-66, 80.45% id in 220 aa
NP_881665.1	Similar to Azotobacter vinelandii molybdate-binding periplasmic protein precursor ModB SW:MODB_AZOVI (EMBL:X69077) (252 aa) fasta scores: E(): 7.4e-61, 69.7% id in 241 aa. Also similar to BP3105, 45.600% identity (45.783% ungapped) in 250 aa overlap.
NP_881666.1	Similar to Saccharomyces cerevisiae hypothetical protein SW:YN93_YEAST (EMBL:Z71679) (290 aa) fasta scores: E(): 1.3e-44, 44.16% id in 274 aa
NP_881667.1	Similar to Streptomyces coelicolor hypothetical protein SCE59.14c TR:Q9L1U0 (EMBL:AL138851) (196 aa) fasta scores: E(): 2.2e-09, 33.33% id in 195 aa
NP_881670.1	Similar to Rhizobium meliloti hypothetical/unknown transmembrane protein SMC00031 TR:CAC45518 (EMBL:AL591785) (159 aa) fasta scores: E(): 9.6e-08, 36.42% id in 140 aa
NP_881671.1	Similar to Rhodobacter capsulatus proline dehydrogenase transcriptional activator PutR SW:PUTR_RHOCA (Q52710) (154 aa) fasta scores: E(): 8.5e-08, 30.13% id in 146 aa, and to Rhizobium meliloti  transcriptional regulator, AsnC family protein SMB21493 TR:CAC49722 (EMBL:AL603646) (153 aa) fasta scores: E(): 1.5e-22, 52.2% id in 136 aa
NP_881672.1	transposase for IS481 element
NP_881673.1	Similar to Rhodobacter capsulatus molybdate-binding periplasmic protein precursor ModA SW:MODA_RHOCA (EMBL:L06254) (252 aa) fasta scores: E(): 9.2e-27, 37.84% id in 251 aa, and to Escherichia coli molybdate-binding periplasmic protein precursor ModA SW:MODA_ECOLI (EMBL:L34009) (257 aa) fasta scores: E(): 1.6e-09, 27.3% id in 249 aa. Also similar to BP3095, 45.600% identity (45.783% ungapped) in 250 aa overlap.
NP_881674.1	Similar to Rhizobium meliloti conserved hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 3.7e-51, 43.93% id in 330 aa
NP_881675.1	Similar to Streptomyces coelicolor gamma-glutamyltranspeptidase SC3C8.26 TR:O69935 (EMBL:AL023861) (603 aa) fasta scores: E(): 3.6e-36, 31.41% id in 573 aa, and to Escherichia coli gamma-glutamyltranspeptidase precursor Ggt or B3447 SW:GGT_ECOLI () (580 aa) fasta scores: E(): 1.5e-21, 31.52% id in 533 aa
NP_881676.1	Similar to Pseudomonas aeruginosa hypothetical protein PA1917 TR:Q9I2I7 (EMBL:AE004617) (115 aa) fasta scores: E(): 8.7e-17, 50% id in 114 aa, and to Pseudomonas aeruginosa hypothetical protein PA3425 TR:Q9HYI0 (EMBL:AE004763) (114 aa) fasta scores: E(): 6.4e-18, 55.76% id in 104 aa
NP_881677.1	Similar to Pseudomonas aeruginosa hypothetical protein PA1918 TR:Q9I2I6 (EMBL:AE004617) (466 aa) fasta scores: E(): 1.4e-104, 59.09% id in 462 aa, and to Pseudomonas aeruginosa hypothetical protein PA3424 TR:Q9HYI1 (EMBL:AE004763) (468 aa) fasta scores: E(): 3.2e-29, 32.19% id in 469 aa
NP_881678.1	Similar to Rhizobium meliloti hypothetical protein SMB21187 TR:CAC49253 (EMBL:AL603645) (276 aa) fasta scores: E(): 3.8e-34, 41.32% id in 271 aa, and to Pseudomonas aeruginosa probable transcriptional regulator PA4987 TR:Q9HUH8 (EMBL:AE004911) (199 aa) fasta scores: E(): 1.3e-10, 30.8% id in 198 aa
NP_881679.1	transposase for IS481 element
NP_881680.1	transposase for IS481 element
NP_881681.1	Very low similarity to Sulfolobus tokodaii 382aa long hypothetical protein ST2010 TR:BAB67105 (EMBL:AP000988) (382 aa) fasta scores: E(): 0.0051, 20.61% id in 388 aa
NP_881682.1	Similar in its N-terminal region to Thermoplasma volcanium modification methylase TVG1542167 TR:Q978C7 (EMBL:AP000996) (616 aa) fasta scores: E(): 1.4e-12, 25.46% id in 534 aa. From residue 646 to residue 839 presents low similarity to Vibrio cholera RtxA toxin TR:Q9X4W2 (EMBL:AF119150) blast scores: E(): 1.7, score: 35 20% id
NP_881683.1	Low similarity to Thermoplasma volcanium TVG1539639 protein TR:Q978C8 (EMBL:AP000996) (843 aa) fasta scores: E(): 0.0031, 22.79% id in 974 aa
NP_881684.1	Similar to Escherichia coli O157:H7 hypothetical 48.5 kDa protein ECS4465 TR:BAB37888 (EMBL:AP002566) (431 aa) fasta scores: E(): 7.4e-09, 27.41% id in 321 aa
NP_881685.1	Similar to Escherichia coli prophage cp4-57 integrase IntA or SlpA or IntX or B2622 SW:INTA_ECOLI (P32053) (413 aa) fasta scores: E(): 4.4e-37, 31.93% id in 404 aa
NP_881686.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
NP_881687.1	no significant database matches
NP_881688.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
NP_881689.1	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response
NP_881690.1	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP
NP_881691.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
NP_881692.1	Incorporates lipoproteins in the outer membrane after they are released by the LolA protein
NP_881693.1	Similar to Pseudomonas aeruginosa hypothetical protein PA4667 SW:YAG7_PSEAE (P42810) (590 aa) fasta scores: E(): 9.6e-24, 28.9% id in 609 aa, and to Neisseria meningitidis  periplasmic protein NMA1090 TR:Q9JUX9 (EMBL:AL162755) (612 aa) fasta scores: E(): 1.4e-18, 24.55% id in 619 aa
NP_881694.1	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases
NP_881695.1	Similar to Aquifex aeolicus beta lactamase precursor CphA1 or AQ_1798 TR:O67667 (EMBL:AE000757) (326 aa) fasta scores: E(): 3.2e-20, 28.62% id in 297 aa
NP_881696.1	Similar to Streptomyces argillaceus oxygenase MtmOII TR:O86481 (EMBL:AJ007932) (531 aa) fasta scores: E(): 4.6e-36, 33.57% id in 557 aa, and to Escherichia coli 3-(3-hydroxy-phenyl)propionate hydroxylase MhpA or B0347 SW:MHPA_ECOLI (P77397) (554 aa) fasta scores: E(): 6.3e-23, 27.63% id in 532 aa
NP_881697.1	Similar to Ralstonia solanacearum hypothetical protein rsp0701 rsp0701 or rs01748 SWALL:Q8XRY0 (EMBL:AL646080) (68 aa) fasta scores: E(): 2.6e-13, 69.84% id in 63 aa
NP_881698.1	Similar to Pseudomonas putida transcriptional activator protein NahR SW:NAHR_PSEPU (P10183) (300 aa) fasta scores: E(): 5.1e-46, 43.81% id in 299 aa
NP_881699.1	An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine
NP_881700.1	Similar to Emericella nidulans fumarylacetoacetase Fah or FahA TR:Q00770 (EMBL:L41670) (431 aa) fasta scores: E(): 5.9e-54, 41% id in 439 aa, and to Pseudomonas aeruginosa fumarylacetoacetase FahA or Pa2008 TR:Q9I2A2 (EMBL:AE004627) (432 aa) fasta scores: E(): 9.9e-93, 57.84% id in 427 aa
NP_881701.1	Similar to Haemophilus influenzae hypothetical protein HI1246 SW:YC46_HAEIN (P44135) (647 aa) fasta scores: E(): 1.1e-113, 47.61% id in 628 aa
NP_881702.1	Similar to Pseudomonas aeruginosa probable two-component sensor PA4380 TR:Q9HW22 (EMBL:AE004854) (426 aa) fasta scores: E(): 2.4e-23, 29.38% id in 439 aa
NP_881703.1	Similar to Pseudomonas aeruginosa probable two-component response regulator PA4381 TR:Q9HW21 (EMBL:AE004854) (227 aa) fasta scores: E(): 8.3e-34, 47.57% id in 227 aa
NP_881704.1	Similar to Agrobacterium tumefaciens Agr_C_1314p TR:AAK86533 (EMBL:AE008006) (478 aa) fasta scores: E(): 3.2e-83, 49.46% id in 463 aa
NP_881705.1	Similar to central region of Streptomyces coelicolor  acetyl/propionyl CoA carboxylase, alpha subunit SCD10.13 TR:Q9K3W3 (EMBL:AL359988) (614 aa) fasta scores: E(): 0.033, 30.33% id in 178 aa
NP_881706.1	Identical to the Bordetella bronchiseptica phosphoglucomutase Pgm TR:Q9S3V9 (EMBL:AF171632) (392 aa) fasta scores: E(): 1.1e-149, 99.23% id in 392 aa, and similar to Pseudomonas aeruginosa phosphomannomutase AlgC or PA5322 SW:ALGC_PSEAE (P26276) (462 aa) fasta scores: E(): 3.9e-93, 53.26% id in 460 aa, and to Neisseria meningitidis phosphoglucomutase Pgm or NMB0790 SW:PGMU_NEIMB (P40391) (460 aa) fasta scores: E(): 1.2e-91, 54.54% id in 440 aa, and to Neisseria gonorrhoeae phosphoglucomutase PGM SW:PGMU_NEIGO (P40390) (460 aa) fasta scores: E(): 1.3e-90, 53.52% id in 454 aa
NP_881707.1	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family
NP_881708.1	Similar to Pseudomonas aeruginosa WbpU TR:Q9RHD0 (EMBL:AF035937) (376 aa) fasta scores: E(): 1e-80, 62.06% id in 369 aa, and to Vibrio cholerae Orf139-23 protein TR:O87140 (EMBL:AB012956) (376 aa) fasta scores: E(): 7.4e-67, 53.63% id in 371 aa
NP_881709.1	Similar to Pseudomonas aeruginosa WbpT TR:Q9RHD1 (EMBL:AF035937) (383 aa) fasta scores: E(): 7.7e-49, 43.55% id in 388 aa
NP_881710.1	Similar to Yersinia enterocolitica WbcM protein WbcM TR:Q56916 (EMBL:Z47767) (358 aa) fasta scores: E(): 8e-13, 26.31% id in 361 aa, and to Rhizobium meliloti glycosyltransferase Smb21250 TR:CAC49154 (EMBL:AL603644) (427 aa) fasta scores: E(): 4.1e-22, 37.05% id in 367 aa. Also similar to BP3147, 41.509% identity (42.897% ungapped) in 371 aa overlap.
NP_881711.1	Similar to Pseudomonas aeruginosa WbpS TR:Q9RHD2 (EMBL:AF035937) (627 aa) fasta scores: E(): 1.5e-123, 53.29% id in 638 aa, and to Rhizobium loti asparagine synthase MLR6755 TR:Q988G2 (EMBL:AP003010) (665 aa) fasta scores: E(): 3.9e-68, 46.56% id in 655 aa
NP_881712.1	Similar to Rhizobium meliloti  glycosyltransferase SMB21250 TR:CAC49154 (EMBL:AL603644) (427 aa) fasta scores: E(): 9.2e-37, 37.46% id in 371 aa, and to Streptomyces coelicolor  transferase SC1c3.12 TR:O69854 (EMBL:AL023702) (697 aa) fasta scores: E(): 4.8e-19, 28.97% id in 390 aa, and to Yersinia enterocolitica TrsD TR:Q56916 (EMBL:Z47767) (358 aa) fasta scores: E(): 3.8e-18, 28.13% id in 359 aa. Also similar to BP3145, 41.509% identity (42.897% ungapped) in 371 aa overlap.
NP_881713.1	Similar to Rhizobium loti virulence factor Mvin-like protein MLL5320 TR:Q98C28 (EMBL:AP003006) (526 aa) fasta scores: E(): 1.3e-13, 25.71% id in 420 aa, and to Streptomyces coelicolor  integral membrane protein SCC61a.30 TR:Q9KYG3 (EMBL:AL356595) (523 aa) fasta scores: E(): 1.5e-11, 28.97% id in 421 aa
NP_881714.1	Similar to Salmonella typhi vi polysaccharide biosynthesis protein VipB or TviC or Sty4660 SW:VIPB_SALTI (Q04973) (348 aa) fasta scores: E(): 2.8e-85, 63.17% id in 334 aa, and to Pseudomonas aeruginosa WbpP TR:Q9RHD6 (EMBL:AF035937) (341 aa) fasta scores: E(): 1e-96, 69.79% id in 341 aa
NP_881715.1	Similar to Salmonella typhi Vi polysaccharide biosynthesis protein VipA or TviB or Sty4661 SW:VIPA_SALTI (Q04972) (425 aa) fasta scores: E(): 1.1e-118, 68.72% id in 422 aa, and to Pseudomonas aeruginosa WbpO TR:Q9RHD7 (EMBL:AF035937) (422 aa) fasta scores: E(): 3.6e-132, 80.09% id in 422 aa. Almost identical to BP1629, 99.762% identity in 420 aa overlap
NP_881716.1	Similar to Burkholderia pseudomallei undecaprenol phosphate N-acetylglucosaminyl transferase TR:O69131 (EMBL:AF064070) (368 aa) fasta scores: E(): 7.8e-51, 41.12% id in 355 aa, and to Pseudomonas aeruginosa glycosyltransferase wbpl wbpl or pa3145 TR:Q9HZ82 (EMBL:AE004738) (339 aa) fasta scores: E(): 3.5e-16, 29.05% id in 327 aa
NP_881717.1	Similar to Pseudomonas aeruginosa hypothetical protein PA0655 TR:Q9I5R6 (EMBL:AE004500) (215 aa) fasta scores: E(): 8e-35, 49.28% id in 211 aa
NP_881718.1	Similar to Pseudomonas aeruginosa hypothetical protein PAa0653 TR:O05133 (EMBL:U89892) (140 aa) fasta scores: E(): 6.9e-25, 53.57% id in 140 aa
NP_881719.1	ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived
NP_881720.1	Similar to Escherichia coli dihydrofolate reductase FolA or TmrA or B0048 SW:DYR_ECOLI (P00379) (159 aa) fasta scores: E(): 1.9e-23, 46.54% id in 159 aa, and to Salmonella typhimurium dihydrofolate reductase type III DhfrIII SW:DYR3_SALTY (P12833) (162 aa) fasta scores: E(): 3.6e-25, 47.17% id in 159 aa
NP_881721.1	Similar to Rhizobium meliloti  transcriptional regulator protein SMBb20039 TR:CAC48442 (EMBL:AL603642) (474 aa) fasta scores: E(): 2.6e-54, 39.15% id in 475 aa, and to Pseudomonas aeruginosa probable transcriptional regulator PA5283 TR:Q9HTS1 (EMBL:AE004941) (458 aa) fasta scores: E(): 3.4e-52, 37.77% id in 458 aa
NP_881722.1	catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate
NP_881723.1	Similar to Rhizobium sp probable peptide ABC transporter periplasmic binding protein Y4tO precursor SW:Y4TO_RHISN (P55669) (531 aa) fasta scores: E(): 2.9e-69, 40.76% id in 520 aa
NP_881724.1	Similar to Rhizobium sp probable peptide ABC transporter permease Y4tP SW:Y4TP_RHISN (Q53191) (313 aa) fasta scores: E(): 4e-60, 52.07% id in 313 aa
NP_881725.1	Similar to Rhizobium sp probable peptide ABC transporter permease Y4tQ SW:Y4TQ_RHISN (Q53192) (291 aa) fasta scores: E(): 3.3e-44, 49.47% id in 283 aa, and to Bacillus firmus dipeptide transport system permease DppC SW:DPPC_BACFI (P94312) (304 aa) fasta scores: E(): 6.6e-33, 38.02% id in 284 aa
NP_881726.1	Similar to Rhizobium loti MLR6294 protein TR:Q989S9 (EMBL:AP003008) (525 aa) fasta scores: E(): 1.1e-43, 33.66% id in 499 aa
NP_881727.1	transposase for IS481 element
NP_881728.1	Identical to Bordetella bronchiseptica urease accessory protein UreG SW:UREG_BORBR (O06709) (214 aa) fasta scores: E(): 1e-74, 99.53% id in 214 aa, and similar to Escherichia coli urease accessory protein UreG SW:UREG_ECOLI (Q03287) (205 aa) fasta scores: E(): 1.4e-44, 65.98% id in 197 aa
NP_881730.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits
NP_881731.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active
NP_881732.1	Similar to Bordetella bronchiseptica urease accessory protein UreJ TR:O06706 (EMBL:AF000579) (202 aa) fasta scores: E(): 7.6e-73, 99.5% id in 202 aa, and to Rhizobium leguminosarum HupE protein precursor SW:HUPE_RHILV (P27650) (191 aa) fasta scores: E(): 6.2e-18, 38.69% id in 199 aa
NP_881733.1	UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter
NP_881734.1	Identical to Bordetella bronchiseptica urease accessory protein UreD SW:URED_BORBR (O06704) (284 aa) fasta scores: E(): 3.6e-121, 100% id in 284 aa, and similar to Escherichia coli urease accessory protein UreD SW:URED_ECOLI (Q03285) (278 aa) fasta scores: E(): 1.5e-24, 33.68% id in 282 aa
NP_881736.1	Similar to Rhizobium loti MLL4859 protein TR:Q98D49 (EMBL:AP003005) (134 aa) fasta scores: E(): 8.4e-23, 46.34% id in 123 aa
NP_881737.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator PA2299 TR:Q9I1H6 (EMBL:AE004655) (249 aa) fasta scores: E(): 1.6e-16, 33.04% id in 227 aa
NP_881738.1	Similar to Clostridium tetanomorphum methylaspartate ammonia-lyase SW:MAAL_CLOTT (Q05514) (413 aa) fasta scores: E(): 2.1e-44, 36.67% id in 409 aa. Also similar to BP0806, 40.500% identity (40.704% ungapped) in 400 aa overlap.
NP_881739.1	Similar to Rhizobium meliloti conserved hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 3.7e-53, 49.07% id in 324 aa
NP_881740.1	Similar to Agrobacterium tumefaciens AGR_l_2924p TR:AAK90029 (EMBL:AE008346) (448 aa) fasta scores: E(): 2.3e-29, 34.33% id in 434 aa
NP_881741.1	Similar to Streptomyces coelicolor  nitrate/nitrite transporter protein SCJ12.25c TR:Q9RI35 (EMBL:AL109989) (412 aa) fasta scores: E(): 2.4e-06, 27.6% id in 413 aa
NP_881742.1	Similar to Pseudomonas aeruginosa hypothetical protein PA0586 TR:Q9I5V1 (EMBL:AE004494) (517 aa) fasta scores: E(): 2.6e-137, 66.06% id in 498 aa, and to Escherichia coli hypothetical protein YcgB or B1188 SW:YCGB_ECOLI (P29013) (510 aa) fasta scores: E(): 1.1e-127, 60.32% id in 494 aa
NP_881743.1	Similar to Vibrio cholerae hypothetical protein VC1873 TR:Q9KQX4 (EMBL:AE004263) (423 aa) fasta scores: E(): 1e-79, 48.82% id in 426 aa, and to Escherichia coli hypothetical protein YeaH or B1784 SW:YEAH_ECOLI (P76235) (427 aa) fasta scores: E(): 2.8e-79, 49.52% id in 424 aa
NP_881744.1	transposase for IS481 element
NP_881745.1	transposase for IS481 element
NP_881746.1	Similar to Streptomyces coelicolor  dehydratase SCE66.09 TR:Q9K3T4 (EMBL:AL359989) (391 aa) fasta scores: E(): 2e-14, 30.44% id in 381 aa
NP_881747.1	Similar to Escherichia coli phenylacetate-coenzyme A ligase PaaK or B1398 SW:PAAK_ECOLI (P76085) (437 aa) fasta scores: E(): 2.2e-40, 34.97% id in 446 aa, and to Archaeoglobus fulgidus coenzyme F390 synthetase Af2013 TR:O28266 (EMBL:AE000964) (440 aa) fasta scores: E(): 2.3e-53, 38.51% id in 444 aa
NP_881748.1	Similar to Deinococcus radiodurans transcriptional regulator, TetR family Dr2376 TR:Q9RRV9 (EMBL:AE002068) (197 aa) fasta scores: E(): 3.9e-08, 27.97% id in 193 aa
NP_881749.1	Similar to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase PA2552 TR:Q9I0T2 (EMBL:AE004683) (375 aa) fasta scores: E(): 7.5e-50, 40.22% id in 363 aa, and to Bacillus subtilis acyl-CoA dehydrogenase AcdA or Acd SW:ACDA_BACSU (P45867) (379 aa) fasta scores: E(): 1.1e-46, 39.88% id in 361 aa
NP_881750.1	Similar to Deinococcus radiodurans branched-chain amino acid ABC transporter permease DR0282 TR:Q9RXM8 (EMBL:AE001889) (334 aa) fasta scores: E(): 6.5e-21, 31.46% id in 321 aa
NP_881751.1	Similar to Deinococcus radiodurans branched-chain amino acid ABC transporter permease DR0281 TR:Q9RXM9 (EMBL:AE001889) (285 aa) fasta scores: E(): 2.4e-25, 31.57% id in 285 aa
NP_881752.1	Similar to Deinococcus radiodurans branched-chain amino acid ABC transporter ATP-binding protein DRA0260 TR:Q9RYP9 (EMBL:AE001863) (238 aa) fasta scores: E(): 2e-30, 50% id in 240 aa, and to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraG or PA1070 SW:BRAG_PSEAE (P21630) (233 aa) fasta scores: E(): 9.8e-27, 42.19% id in 237 aa
NP_881753.1	Similar to Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivG or B3455 or Z4825 or ECS4302 SW:LIVG_ECOLI (P22730) (255 aa) fasta scores: E(): 6.6e-23, 36.86% id in 255 aa
NP_881754.1	Similar to Escherichia coli Leu/Ile/Val-binding protein precursor LivJ or B3460 SW:LIVJ_ECOLI (P02917) (367 aa) fasta scores: E(): 3.6e-14, 27.74% id in 364 aa
NP_881755.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_881756.1	Similar to Sulfolobus solfataricus hypothetical protein SSO2626 TR:Q97VJ8 (EMBL:AE006858) (128 aa) fasta scores: E(): 3.4e-05, 28.15% id in 103 aa
NP_881757.1	Similar to Pseudomonas aeruginosa (R)-specific enoyl-CoA hydratase PhaJ2 or PA1018 TR:Q9LBK1 (EMBL:AB040026) (288 aa) fasta scores: E(): 8.3e-39, 46.09% id in 282 aa, and to Mycobacterium tuberculosis CDC1551 maoc family protein mt3496 TR:AAK47833 (EMBL:AE007156) (290 aa) fasta scores: E(): 5.4e-31, 41.27% id in 298 aa
NP_881758.1	Similar to Arabidopsis thaliana hypothetical 44.2 kDa protein T22A6.50 or At4G24220 TR:Q9STX2 (EMBL:AL078637) (388 aa) fasta scores: E(): 3.8e-17, 29.75% id in 373 aa
NP_881759.1	transposase for IS481 element
NP_881760.1	Weak similarity to Synechococcus vulcanus delta 9 acyl-lipid fatty acid desaturase DesC TR:Q9ZAP7 (EMBL:U90417) (279 aa) fasta scores: E(): 0.0008, 25.09% id in 255 aa, and to Anabaena sp delta-9 desaturase DesC TR:BAB76690 (EMBL:AP003598) (285 aa) fasta scores: E(): 0.0015, 23.22% id in 254 aa
NP_881761.1	transposase for IS481 element
NP_881762.1	An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids
NP_881763.1	Similar to Pseudomonas aeruginosa hypothetical protein PA1814 TR:Q9I2T0 (EMBL:AE004608) (253 aa) fasta scores: E(): 1.3e-18, 31.47% id in 251 aa
NP_881764.1	Similar to Escherichia coli probable hydroxyacylglutathione hydrolase GloB or b0212 or z0236 or ecs0208 SWALL:GLO2_ECOLI (SWALL:Q47677) (251 aa) fasta scores: E(): 1.1e-36, 47.45% id in 255 aa
NP_881765.1	Similar to Escherichia coli membrane-bound lytic murein transglycosylase D precursor MltD or DniR or B0211 SW:MLTD_ECOLI (P23931) (452 aa) fasta scores: E(): 2.4e-29, 32.05% id in 443 aa, and to Pseudomonas aeruginosa membrane-bound lytic murein transglycosylase d precursor MltD or Pa1812 TR:Q9I2T2 (EMBL:AE004607) (534 aa) fasta scores: E(): 1.1e-47, 38.84% id in 484 aa; membrane-bound precursor protein
NP_881766.1	Catalyzes a key regulatory step in fatty acid biosynthesis
NP_881767.1	Similar to Neisseria meningitidis invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter spSE19. pilin inverting protein ChnY TR:Q9F7E1 (EMBL:AF282240) (324 aa) fasta scores: E(): 8.2e-50, 47.516% id in 322 aa
NP_881768.1	Similar to Pseudomonas aeruginosa hypothetical protein PA1203 TR:Q9I4D5 (EMBL:AE004550) (135 aa) fasta scores: E(): 3.9e-09, 33.58% id in 134 aa
NP_881769.1	Similar to Pseudomonas aeruginosa hypothetical protein PA3712 TR:Q9HXS9 (EMBL:AE004790) (231 aa) fasta scores: E(): 1.7e-39, 58.4% id in 226 aa
NP_881770.1	Similar to Rhizobium meliloti conserved hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 8.5e-42, 41.61% id in 310 aa
NP_881771.1	transposase for IS481 element
NP_881772.1	Similar to Escherichia coli transcriptional regulatory protein OmpR or OmpB or Kmt or B3405 or Z4760 or ECS4247 SW:OMPR_ECOLI (P03025) (239 aa) fasta scores: E(): 9.5e-40, 50.87% id in 230 aa, and to Bordetella pertussis, Bordetella bronchiseptica, Bordetella avium, and Bordetella parapertussis RisA proteinTR:O88117 (EMBL:AJ224798) (244 aa) fasta scores: E(): 8.4e-40, 50.21% id in 235 aa
NP_881773.1	Similar to Pseudomonas aeruginosa two-component sensor EnvZ or PA5199 TR:Q9HTZ0 (EMBL:AE004932) (439 aa) fasta scores: E(): 5.9e-24, 31.87% id in 480 aa, and to Bordetella pertussis, Bordetella bronchiseptica, Bordetella avium, and Bordetella parapertussis RisS protein TR:O88100 (EMBL:AJ224799) (474 aa) fasta scores: E(): 4.6e-22, 34.2% id in 307 aa
NP_881774.1	Similar to Escherichia coli cytochrome D ubiquinol oxidase subunit II CydB SW:CYDB_ECOLI (P11027) (379 aa) fasta scores: E(): 0.022, 21.97% id in 364 aa, and to Rhizobium loti quinol oxidase, subunit II MLR4525 TR:Q98DW0 (EMBL:AP003004) (334 aa) fasta scores: E(): 1.9e-39, 35.78% id in 327 aa
NP_881775.1	Similar to Ralstonia solanacearum  transmembrane cytochrome BD-II oxidase Rsp1242 TR:CAD18393 (EMBL:AL646083) (462 aa) fasta scores: E(): 1.7e-56, 41.14% id in 435 aa, and to Rhizobium loti quinol oxidase subunit I mlr4524 TR:Q98DW1 (EMBL:AP003004) (453 aa) fasta scores: E(): 7.3e-52, 38.03% id in 447 aa
NP_881776.1	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_881777.1	blocks the formation of polar Z-ring septums
NP_881778.1	Similar to Escherichia coli septum site-determining protein MinD SW:MIND_ECOLI (P18197) (269 aa) fasta scores: E(): 4.8e-70, 73.13% id in 268 aa, and to Vibrio cholerae septum site-determining protein mind VC1960 TR:Q9KQN8 (EMBL:AE004271) (276 aa) fasta scores: E(): 1.4e-70, 70.9% id in 275 aa
NP_881779.1	works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell
NP_881780.1	Similar to Neisseria meningitidis invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 5.2e-17, 28.165% id in 316 aa and Acinetobacter spSE19. pilin inverting protein ChnY TR:Q9F7E1 (EMBL:AF282240) (324 aa) fasta scores: E(): 1.9e-49, 47.205% id in 322 aa
NP_881781.1	Similar to Escherichia coli osmotically inducible lipoprotein B precursor OsmB or B1283 or Z2523 or Ecs1856 SW:OSMB_ECOLI (P17873) (72 aa) fasta scores: E(): 6.7e-08, 51.47% id in 68 aa
NP_881782.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa4287 TR:Q9HWB3 (EMBL:AE004845) (296 aa) fasta scores: E(): 6.9e-45, 50.17% id in 289 aa, and to Rhizobium meliloti hypothetical transmembrane protein Smc00642 TR:CAC47308 (EMBL:AL591791) (296 aa) fasta scores: E(): 6.1e-22, 30.98% id in 284 aa. Lies alongside a  ABC transport protein.
NP_881784.1	Similar to Rhizobium meliloti  peptide-binding periplasmic ABC transporter protein smc02417 TR:CAC47172 (EMBL:AL591791) (520 aa) fasta scores: E(): 1.6e-72, 39.18% id in 518 aa
NP_881785.1	Similar to proteins involved in polysaccharide biosynthesis eg. Yersinia enterocolitica WbcL protein TR:Q56915 (EMBL:Z47767) (292 aa) fasta scores: E(): 5.7e-18, 28.51% id in 270 aa, and to Streptococcus agalactiae CpsvN TR:Q9AFH5 (EMBL:AF349539) (295 aa) fasta scores: E(): 1.2e-10, 28.5% id in 228 aa
NP_881786.1	Similar to many eg. Pseudomonas aeruginosa transcriptional regulator PtxR or pa2258 SW:PTXR_PSEAE (P72131) (312 aa) fasta scores: E(): 1.1e-21, 30.69% id in 316 aa. Also similar to BP0265, 49.329% identity (50.690% ungapped) in 298 aa overlap.
NP_881787.1	Similar to Neisseria meningitidis; periplasmic protein Nma2065 SWALL:Q9JSZ4 (EMBL:AL162758)(90 aa) fasta scores: E()3.9 45.65% id in 46 aa overlap
NP_881788.1	Full length similarity to Deinococcus radiodurans excinuclease ABC subunit A UvrA or dr1771 SW:UVRA_DEIRA (Q46577) (1016 aa) fasta scores: E(): 2.9e-103, 39.43% id in 1070 aa, and partial sinilarity to others eg. Escherichia coli excinuclease ABC subunit A UvrA or DinE or b4058 SW:UVRA_ECOLI (P07671) (940 aa) fasta scores: E(): 4.7e-66, 42.29% id in 960 aa
NP_881789.1	catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine
NP_881790.1	Similar to Rhizobium loti Mlr3007 protein TR:Q98H69 (EMBL:AP003000) (220 aa) fasta scores: E(): 4.6e-18, 36.71% id in 207 aa, and to Rhizobium meliloti hypothetical protein Smc04014 TR:CAC47377 (EMBL:AL591791) (208 aa) fasta scores: E(): 4.7e-17, 40.77% id in 206 aa
NP_881791.1	Similar to Neisseria meningitidis invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter spSE19. pilin inverting protein ChnY TR:Q9F7E1 (EMBL:AF282240) (324 aa) fasta scores: E(): 8.2e-50, 47.516% id in 322 aa
NP_881792.1	Similar to Streptomyces galilaeus  aklaviketone reductase AknU TR:Q9L4U4 (EMBL:AF264025) (267 aa) fasta scores: E(): 7.4e-22, 40.16% id in 244 aa, and to Streptomyces peucetius daunorubicin-doxorubicin polyketide synthase DnrH TR:Q54810 (EMBL:L35560) (251 aa) fasta scores: E(): 1.7e-19, 40.89% id in 247 aa
NP_881793.1	Similar to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 9.7e-39, 40.37% id in 317 aa, and to Variovorax paradoxus 2,4-diphenoxyacetic acid gene cluster protein TR:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 1.6e-35, 35.84% id in 332 aa
NP_881794.1	activates fatty acids by binding to coenzyme A
NP_881795.1	Similar to Klebsiella aerogenes histidine utilization repressor HutC SW:HUTC_KLEAE (P12380) (241 aa) fasta scores: E(): 5.8e-09, 25.64% id in 234 aa
NP_881796.1	Similar to Escherichia coli hypothetical protein YgdL or b2812 SW:YGDL_ECOLI (Q46927) (268 aa) fasta scores: E(): 8.8e-33, 42.85% id in 273 aa, and to Neisseria meningitidis hypothetical protein NMA1704 TR:Q9JTN0 (EMBL:AL162756) (258 aa) fasta scores: E(): 1.7e-32, 45.31% id in 267 aa
NP_881797.1	Similar to Streptomyces coelicolor  integral membrane transport protein SCI30A.30C TR:Q9S243 (EMBL:AL096811) (463 aa) fasta scores: E(): 6.1e-19, 30.78% id in 393 aa, and to Streptoverticillium netropsis SpcT TR:Q9S1M2 (EMBL:U70376) (433 aa) fasta scores: E(): 6.8e-08, 27.29% id in 392 aa
NP_881798.1	Similar to Rhizobium loti Mll3532 protein TR:Q98G14 (EMBL:AP003002) (184 aa) fasta scores: E(): 1.2e-24, 46.15% id in 169 aa, and to Escherichia coli cation transport protein ChaC or b1218 SW:CHAC_ECOLI (P39163) (231 aa) fasta scores: E(): 1.2e-22, 38.61% id in 202 aa. Also similar to BP3007, 57.714% identity (57.714% ungapped) in 175 aa overlap.
NP_881799.1	Similar to Escherichia coli pyridoxamine 5'-phosphate oxidase PdxH or b1638 SW:PDXH_ECOLI (P28225) (217 aa) fasta scores: E(): 4.8e-34, 45.23% id in 210 aa, and to Pseudomonas aeruginosa pyridoxine 5'-phosphate oxidase PdxH or pa1049 TR:Q9I4S5 (EMBL:AE004537) (215 aa) fasta scores: E(): 3.9e-46, 58.87% id in 214 aa
NP_881800.1	Similar to Chelatobacter heintzii nitrilotriacetate monooxygenase component B NtaB or NmoB SW:NTAB_CHEHE (P54990) (322 aa) fasta scores: E(): 8.1e-20, 38.78% id in 165 aa
NP_881801.1	Similar to Agrobacterium tumefaciens StrC58 Agr_c_4955p TR:AAK88449 (EMBL:AE008187) (367 aa) fasta scores: E(): 9.3e-78, 59.51% id in 368 aa, and to Caulobacter crescentus hypothetical protein Cc3174 TR:Q9A3M8 (EMBL:AE005981) (372 aa) fasta scores: E(): 4.1e-67, 51.64% id in 364 aa
NP_881802.1	produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine
NP_881803.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa3594 TR:Q9HY32 (EMBL:AE004780) (295 aa) fasta scores: E(): 6.6e-45, 47.26% id in 292 aa, and to Bacillus subtilis als operon regulatory protein AlsR SW:ALSR_BACSU (Q04778) (302 aa) fasta scores: E(): 4.8e-27, 37.65% id in 247 aa
NP_881804.1	transposase for IS481 element
NP_881805.1	involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water
NP_881806.1	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate
NP_881807.1	TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity
NP_881808.1	with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine
NP_881809.1	Similar to Alcaligenes eutrophus phosphoglycolate phosphatase CbbzC SW:GPHC_ALCEU (P40852) (231 aa) fasta scores: E(): 1.3e-28, 47.14% id in 210 aa
NP_881810.1	Similar to Alcaligenes eutrophus ribulose-phosphate 3-epimerase, plasmid CbbEP or CfxE SW:RPEP_ALCEU (Q04539) (241 aa) fasta scores: E(): 1.1e-62, 69.74% id in 238 aa, and to Escherichia coli, and ribulose-phosphate 3-epimerase Rpe or Dod or b3386 or z4739 or ecs4228 SW:RPE_ECOLI (P32661) (225 aa) fasta scores: E(): 1.3e-58, 72.27% id in 220 aa
NP_881811.1	protein associated with Co2+ and Mg2+ efflux
NP_881812.1	Similar to Pseudomonas aeruginosa probable membrane-bound lytic murein transglycolase A Pa1222 TR:Q9I4B6 (EMBL:AE004552) (385 aa) fasta scores: E(): 8.8e-50, 41.99% id in 381 aa, and to many from Neisseria spp. eg. Neisseria meningitidis outer membrane lipoprotein Gna33 TR:Q9JPQ9 (EMBL:AF226404) (441 aa) fasta scores: E(): 2.7e-33, 34.7% id in 461 aa, and to Escherichia coli membrane-bound lytic murein transglycosylase A precursor MltA or Mlt or b2813 or z4130 or ecs3673 SW:MLTA_ECOLI (P46885) (365 aa) fasta scores: E(): 9.1e-16, 33.11% id in 302 aa
NP_881813.1	Similar to Pseudomonas aeruginosa probable FAD-dependent monooxygenase Pa5221 TR:Q9HTW9 (EMBL:AE004935) (405 aa) fasta scores: E(): 1.1e-33, 39.01% id in 387 aa, and to Escherichia coli 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase UbiF or b0662 SW:UBIF_ECOLI (P75728) (391 aa) fasta scores: E(): 2.1e-29, 34.17% id in 395 aa
NP_881814.1	Similar to Neisseria meningitidis (serogroup A), and  thiol:disulphide interchange protein NMA0730 or NMB0550 TR:Q9JR63 (EMBL:AL162754) (260 aa) fasta scores: E(): 3.9e-26, 36.9% id in 233 aa, and to Escherichia coli thiol:disulfide interchange protein DsbC precursor or XprA or b2893 or z4231 or ecs3765 SW:DSBC_ECOLI (P21892) (236 aa) fasta scores: E(): 9e-12, 28.57% id in 231 aa
NP_881815.1	Similar to Streptomyces coelicolor  2-hydroxyacid dehydrogenase SCC61A.17 TR:Q9KYH6 (EMBL:AL356595) (330 aa) fasta scores: E(): 1.2e-49, 49.67% id in 308 aa, and to Bacillus subtilis D-3-phosphoglycerate dehydrogenase SerA SW:SERA_BACSU (P35136) (525 aa) fasta scores: E(): 1.4e-22, 32.48% id in 274 aa
NP_881816.1	transposase for IS481 element
NP_881817.1	TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs
NP_881818.1	Similar to Escherichia coli dihydroneopterin aldolase FolB or b3058 SW:FOLB_ECOLI (P31055) (122 aa) fasta scores: E(): 2.2e-05, 32.43% id in 111 aa, and to Xylella fastidiosa dihydroneopterin aldolase Xf0436 TR:Q9PG66 (EMBL:AE003894) (120 aa) fasta scores: E(): 2.6e-09, 40% id in 115 aa
NP_881819.1	Similar to C-terminal portion of many eg. Salmonella typhimurium alkyl hydroperoxide reductase subunit F AhpF or stm0609 SW:AHPF_SALTY (P19480) (521 aa) fasta scores: E(): 8.1e-08, 28.84% id in 312 aa, and to Escherichia coli alkyl hydroperoxide reductase subunit F AhpF or b0606 SW:AHPF_ECOLI (P35340) (521 aa) fasta scores: E(): 2.4e-07, 27.65% id in 311 aa
NP_881820.1	Similar to Neisseria meningitidis hypothetical protein NMB1726 TR:Q9JY58 (EMBL:AE002523) (582 aa) fasta scores: E(): 1.1e-56, 40.9% id in 594 aa
NP_881821.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_881822.1	transposase for IS481 element
NP_881823.1	Similar to Neisseria meningitidis hypothetical protein Nmb1941 TR:Q9JXP8 (EMBL:AE002542) (117 aa) fasta scores: E(): 0.032, 32.69% id in 104 aa, and to Vibrio cholerae ATP synthase I AtpI or vc2771 SW:ATPZ_VIBCH (Q9KNG8) (129 aa) fasta scores: E(): 0.095, 39.7% id in 68 aa
NP_881824.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0
NP_881825.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0
NP_881826.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.
NP_881827.1	Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex
NP_881828.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
NP_881829.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit
NP_881830.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
NP_881831.1	part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane
NP_881833.1	catalyzes the formation of coproporphyrinogen from uroporphyrinogen III
NP_881834.1	Similar to Neisseria meningitidis primosomal protein N` NMB0551 TR:Q9K0N6 (EMBL:AE002411) (729 aa) fasta scores: E(): 6.6e-91, 42.97% id in 740 aa, and to Escherichia coli primosomal protein N' PriA or b3935 SW:PRIA_ECOLI (P17888) (732 aa) fasta scores: E(): 1.9e-77, 39.56% id in 738 aa
NP_881835.1	Similar to Escherichia coli ATP-dependent DNA helicase Rep or b3778 SW:REP_ECOLI (P09980) (673 aa) fasta scores: E(): 4.4e-103, 49.48% id in 677 aa
NP_881836.1	transposase for IS481 element
NP_881837.1	Similar to Bacillus halodurans carboxypeptidase G2 bh0352 TR:Q9KFW8 (EMBL:AP001508) (374 aa) fasta scores: E(): 1e-41, 37.46% id in 363 aa, and to Pseudomonas sp carboxypeptidase G2 precursor cpg2 SW:CBPG_PSES6 (P06621) (415 aa) fasta scores: E(): 2e-21, 26.41% id in 371 aa
NP_881839.1	Similar to Agrobacterium tumefaciens strC58 Agr_pat_365p TR:AAK90629 (EMBL:AE007895) (318 aa) fasta scores: E(): 9.6e-58, 53.95% id in 291 aa, and to Escherichia coli dipeptide transport system permease DppC or b3542 or z4959 or ecs4422 SW:DPPC_ECOLI (P37315) (300 aa) fasta scores: E(): 3.6e-35, 39.56% id in 273 aa
NP_881840.1	Similar to Agrobacterium tumefaciens strC58 Agr_pat_363p TR:AAK90628 (EMBL:AE007895) (323 aa) fasta scores: E(): 2.2e-66, 53.43% id in 320 aa, and to Bacillus subtilis oligopeptide transport system permease AppB SW:APPB_BACSU (P42062) (317 aa) fasta scores: E(): 1.9e-40, 36.64% id in 322 aa
NP_881843.1	Similar to many eg. Neisseria meningitidis hypothetical protein NMA1369 TR:Q9JUD3 (EMBL:AL162755) (296 aa) fasta scores: E(): 8.5e-36, 47.23% id in 271 aa
NP_881844.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_881845.1	Similar to Caulobacter crescentus enoyl-CoA hydratase/isomerase family protein cc0397 TR:Q9AB37 (EMBL:AE005712) (256 aa) fasta scores: E(): 4.8e-33, 46.41% id in 237 aa, and to Mus musculus peroxisomal 3,2-trans-enoyl-CoA isomerase PecI SW:PECI_MOUSE (Q9WUR2) (358 aa) fasta scores: E(): 4.6e-20, 34.13% id in 249 aa
NP_881846.1	Similar to many eg. Rhizobium meliloti hypothetical protein Smc02150 TR:CAC41942 (EMBL:AL591783) (336 aa) fasta scores: E(): 8.8e-66, 57.37% id in 312 aa
NP_881847.1	Similar to many eg. Rhodococcus spNCIMB 9784. transcriptional repressor CamPR TR:AAK50621 (EMBL:AF323755) (206 aa) fasta scores: E(): 4.3e-13, 30.69% id in 202 aa
NP_881848.1	Similar to many eg. Pseudomonas aeruginosa probable acyl-CoA dehydrogenase Pa1631 TR:Q9I391 (EMBL:AE004590) (384 aa) fasta scores: E(): 2.1e-106, 70.6% id in 381 aa, and to Clostridium acetobutylicum acyl-CoA dehydrogenase, short-chain specific Bcd or Cac2711 SW:ACDS_CLOAB (P52042) (379 aa) fasta scores: E(): 3.3e-46, 38.91% id in 370 aa
NP_881849.1	transposase for IS481 element
NP_881850.1	transposase for IS1002 element
NP_881851.1	transposase for IS481 element
NP_881852.1	Similar to Rhizobium meliloti  copper oxidase, possibly exported Sma1041 TR:AAK65222 (EMBL:AE007246) (170 aa) fasta scores: E(): 9.2e-17, 43.75% id in 160 aa, and to Aeromonas veronii bvSobria. CopC associated with copper tolerance TR:Q9L912 (EMBL:AF187849) (177 aa) fasta scores: E(): 5.4e-16, 46.52% id in 144 aa
NP_881853.1	Similar to Ralstonia metallidurans CopA protein TR:Q9F3S1 (EMBL:AJ278983) (614 aa) fasta scores: E(): 1.2e-133, 59.63% id in 602 aa, and to Pseudomonas syringae copper resistance protein A precursor CopA SW:COPA_PSESM (P12374) (609 aa) fasta scores: E(): 2.8e-95, 61.85% id in 603 aa, and to Escherichia coli copper resistance protein A precursor PcoA SW:PCOA_ECOLI (Q47452) (605 aa) fasta scores: E(): 5.4e-91, 59.05% id in 613 aa
NP_881854.1	Similar to Pseudomonas aeruginosa copper resistance protein B precursor PcoB or Pa2064 TR:Q9I251 (EMBL:AE004633) (325 aa) fasta scores: E(): 3.3e-41, 42.76% id in 318 aa, and to Pseudomonas syringae copper resistance protein B precursor CopB SW:COPB_PSESM (P12375) (328 aa) fasta scores: E(): 4.2e-39, 42.66% id in 300 aa, and to Escherichia coli copper resistance protein B precursor PcoB SW:PCOB_ECOLI (Q47453) (296 aa) fasta scores: E(): 1.3e-34, 39.66% id in 295 aa
NP_881855.1	Similar to Mycobacterium tuberculosis probable enoyl-CoA hydratase EchA6 or Rv0905 or Mt0928 or mtcy31.33 SW:ECH6_MYCTU (Q10533) (243 aa) fasta scores: E(): 2.9e-11, 34.41% id in 215 aa
NP_881856.1	Similar to Escherichia coli transcriptional regulator KdgR or b1827 SW:KDGR_ECOLI (P76268) (263 aa) fasta scores: E(): 7.8e-25, 37.94% id in 253 aa, and to Pectobacterium carotovorum subspcarotovorum. KdgR TR:Q9RB25 (EMBL:AF135395) (263 aa) fasta scores: E(): 1.2e-21, 35.17% id in 253 aa
NP_881857.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa2602 TR:Q9I0N5 (EMBL:AE004689) (201 aa) fasta scores: E(): 2.3e-38, 55.31% id in 188 aa
NP_881858.1	Similar to Rhizobium meliloti  amidase Sma1377 TR:AAK65414 (EMBL:AE007262) (471 aa) fasta scores: E(): 1.2e-38, 35.2% id in 446 aa, and to Pseudomonas putida amidase SW:AMID_PSEPU (O69768) (466 aa) fasta scores: E(): 3.9e-24, 37.5% id in 456 aa
NP_881859.1	Similar to Streptococcus pneumoniae R6 ABC transporter substrate-binding protein-branched chain amino acid transport livJ TR:AAK99463 (EMBL:AE008443) (386 aa) fasta scores: E(): 3.5e-30, 33.76% id in 388 aa, and to Salmonella typhimurium leucine-specific binding protein precursor livk or livC SW:LIVK_SALTY (P17216) (369 aa) fasta scores: E(): 4.2e-22, 27.4% id in 354 aa
NP_881860.1	transposase for IS481 element
NP_881861.1	4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction
NP_881863.1	Similar to many eg. Neisseria meningitidis sugar-phosphate nucleotidyl transferase nma0615 TR:Q9JVZ0 (EMBL:AL162753) (231 aa) fasta scores: E(): 2.4e-43, 58.55% id in 222 aa
NP_881864.1	Similar to many eg. Pseudomonas aeruginosa hypothetical protein Pa0596 TR:Q9I5U1 (EMBL:AE004496) (338 aa) fasta scores: E(): 1.9e-52, 45.85% id in 338 aa
NP_881865.1	Similar to Xylella fastidiosa organic solvent tolerance precursor xf0837 TR:Q9PF41 (EMBL:AE003923) (792 aa) fasta scores: E(): 2.4e-46, 30.18% id in 815 aa, and to Escherichia coli organic solvent tolerance protein precursor Imp or OstA or b0054 SW:OSTA_ECOLI (P31554) (784 aa) fasta scores: E(): 4e-40, 26.97% id in 812 aa
NP_881866.1	Similar to Xylella fastidiosa peptidyl-prolyl cis-trans isomerase xf0838 TR:Q9PF40 (EMBL:AE003923) (464 aa) fasta scores: E(): 9.3e-12, 31.37% id in 510 aa, and to Escherichia coli, and survival protein SurA precursor or b0053 or z0062 or ecs0058 SW:SURA_ECOLI (P21202) (428 aa) fasta scores: E(): 2e-07, 33.18% id in 461 aa. Thought to assist the correct folding of outer membrane proteins.
NP_881867.1	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin
NP_881868.1	Similar to Escherichia coli glycerate kinase 2 GarK or b3124 SW:GRK2_ECOLI (P23524) (381 aa) fasta scores: E(): 2.8e-57, 49.6% id in 379 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1052 TR:Q9I4S2 (EMBL:AE004537) (381 aa) fasta scores: E(): 1.6e-81, 68.09% id in 373 aa
NP_881869.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
NP_881870.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa5478 TR:Q9HT92 (EMBL:AE004960) (409 aa) fasta scores: E(): 6e-116, 78.18% id in 408 aa. C-terminus similar to Bacillus subtilis spore maturation protein B SpmB SW:SPMB_BACSU (P35158) (179 aa) fasta scores: E(): 3.4e-17, 41.61% id in 173 aa
NP_881871.1	transposase for IS481 element
NP_881872.1	Similar to Escherichia coli ferrichrome transport ATP-binding protein FhuC or b0151 SW:FHUC_ECOLI (P07821) (265 aa) fasta scores: E(): 4.2e-19, 38.49% id in 239 aa
NP_881873.1	Similar to Rhizobium meliloti  iron ABC transporter permease smb21430 TR:CAC49658 (EMBL:AL603646) (356 aa) fasta scores: E(): 4.7e-59, 52.41% id in 332 aa, and to Corynebacterium diphtheriae HmuU TR:Q9XD88 (EMBL:AF109162) (350 aa) fasta scores: E(): 1.4e-35, 37.69% id in 329 aa. Also similar to BP0344, 40.256% identity (42.568% ungapped) in 313 aa overlap.
NP_881874.1	Similar to Pseudomonas aeruginosa periplasmic protein pa0974 TR:Q9RNV2 (EMBL:AF177774) (274 aa) fasta scores: E(): 2.7e-09, 30.47% id in 210 aa
NP_881875.1	Similar to Haemophilus ducreyi 18 kDa outer membrane protein TR:Q47958 (EMBL:U42466) (157 aa) fasta scores: E(): 1.1e-19, 46.01% id in 163 aa, and to Escherichia coli peptidoglycan-associated lipoprotein precursor Pal or ExcC or b0741 or z0909 or ecs0776 SW:PAL_ECOLI (P07176) (173 aa) fasta scores: E(): 2.3e-15, 38.23% id in 170 aa
NP_881876.1	forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA
NP_881877.1	No significant database matches. Contains possible coiled-coil region at residues 131-202.
NP_881878.1	Similar to Escherichia coli TolR protein or b0738 or z0906 or ecs0773 SW:TOLR_ECOLI (P05829) (142 aa) fasta scores: E(): 9.1e-09, 33.33% id in 138 aa
NP_881879.1	Similar to Escherichia coli TolQ protein or Fii or b0737 or z0905 or ecs0772 SW:TOLQ_ECOLI (P05828) (230 aa) fasta scores: E(): 3.2e-38, 50.68% id in 219 aa
NP_881880.1	Similar to many eg. Pasteurella multocida hypothetical protein Pm0971 TR:Q9CM67 (EMBL:AE006136) (136 aa) fasta scores: E(): 1.4e-19, 43.9% id in 123 aa
NP_881881.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
NP_881882.1	hydrolyzes diadenosine polyphosphate
NP_881883.1	Similar to Salmonella typhimurium transcriptional regulatory protein TctD TR:AAL21670 (EMBL:M28368) (224 aa) fasta scores: E(): 1.1e-37, 50.68% id in 219 aa, and to Ralstonia solanacearum  response regulator transcription regulator protein RSC2935 TR:CAD16642 (EMBL:AL646072) (235 aa) fasta scores: E(): 2.8e-55, 66.36% id in 223 aa
NP_881885.1	Similar to Salmonella typhimurium gifsy-2 prophage stm1053 SWALL:Q8ZQ78 (EMBL:AE008745) (208 aa) fasta scores: E(): 6.8e-16, 38.83% id in 188 aa, and to Bacteriophage SPBc2 YoqW protein SWALL:O64131 (EMBL:AF020713) (224 aa) fasta scores: E(): 3.3e-09, 27.19% id in 228 aa
NP_881886.1	no significant database matches.
NP_881887.1	no significant database matches
NP_881888.1	Weakly similar to Bacteriophage N15 protein gp55 precursor 55 SW:VG55_BPN15 (O64363) (181 aa) fasta scores: E(): 0.00017, 31.76% id in 170 aa. Also similar to Escherichia coli hypothetical protein YdfP precursor YdfP SW:YDFP_ECOLI (P76158) (165 aa) fasta scores: E(): 4.5e-06, 32.71% id in 162 aa
NP_881889.1	Similar to Serratia marcescens phage lysozyme RegB SWALL:Q54423 (EMBL:U31763) (179 aa) fasta scores: E(): 0.05, 30.76% id in 169 aa, and to Bacteriophage phi-Ea1h lysozyme LyZ SWALL:Q9FZS7 (EMBL:AJ278614) (178 aa) fasta scores: E(): 0.079, 26.7% id in 191 aa
NP_881890.1	Weakly similar to Serratia marcescens extracellular secretory protein NucE TR:Q54418 (EMBL:U11698) (89 aa) fasta scores: E(): 0.26, 31.08% id in 74 aa, and to Haemophilus somnus holin TR:Q48281 (EMBL:U28154) (74 aa) fasta scores: E(): 2.6, 28.57% id in 63 aa
NP_881891.1	no significant database matches
NP_881892.1	no significant database matches
NP_881893.1	no significant database matches
NP_881894.1	Similar to Bacteriophage D3 Orf26 TR:Q9MC95 (EMBL:AF165214) (909 aa) fasta scores: E(): 4.5e-23, 26.57% id in 700 aa, and to Bacteriophage HK022 GP24 TR:Q9MCU0 (EMBL:AF069308) (1183 aa) fasta scores: E(): 3.4e-08, 22.26% id in 1051 aa. Possible alternative translational start sites.
NP_881895.1	Similar to Bacteriophage D3 Orf25 TR:Q9MC96 (EMBL:AF165214) (135 aa) fasta scores: E(): 0.0012, 32.03% id in 128 aa
NP_881896.1	Similar to Bacteriophage D3 Orf22 TR:Q9MC99 (EMBL:AF165214) (163 aa) fasta scores: E(): 0.41, 23.12% id in 173 aa
NP_881897.1	Similar to Bacteriophage D3 Orf21 TR:Q9MCA0 (EMBL:AF165214) (159 aa) fasta scores: E(): 9.9e-05, 34.31% id in 102 aa, and weakly similar to the C-terminal portion of Drosophila melanogaster protein CG3415 TR:AAK92917 (EMBL:AE003501) (598 aa) fasta scores: E(): 6.4, 26.59% id in 94 aa
NP_881898.1	Similar to Bacteriophage lambda minor tail protein precursor H SW:VMTH_LAMBD (P03736) (853 aa) fasta scores: E(): 1.3e-26, 26.31% id in 859 aa, and to Escherichia coli O157:H7  tail length tape measure protein precursor ECS0837 TR:BAB34260 (EMBL:AP002553) (1021 aa) fasta scores: E(): 9.4e-34, 26.83% id in 831 aa
NP_881899.1	Similar to Yersinia pestis hypothetical phage protein Ypo2118 ypo2118 SWALL:Q8ZEP2 (EMBL:AJ414151) (73 aa) fasta scores: E(): 1.2e-08, 52.05% id in 73 aa
NP_881900.1	Similar to Yersinia pestis hypothetical phage protein Ypo2117 ypo2117 SWALL:Q8ZEP3 (EMBL:AJ414151) (103 aa) fasta scores: E(): 2.7e-07, 36.79% id in 106 aa
NP_881901.1	Similar to Ralstonia solanacearum hypothetical protein rsc1689 rsc1689 or rs04083 SWALL:Q8XYR9 (EMBL:AL646065) (217 aa) fasta scores: E(): 4.3e-22, 41.07% id in 168 aa
NP_881902.1	Similar to Escherichia coli O157:H7 hypothetical protein ECS3504 TR:BAB36927 (EMBL:AP002562) (188 aa) fasta scores: E(): 2.5e-14, 37.5% id in 144 aa. C-terminal region is similar to bacteriophage T7 gene 3.8 hypothetical protein SW:Y38_BPT7 (P03797) (121 aa) fasta scores: E(): 0.0023, 30.39% id in 102 aa
NP_881903.1	Similar to Rhizobium loti hypothetical protein MLR8015 TR:Q984G5 (EMBL:AP003013) (137 aa) fasta scores: E(): 0.0066, 30.43% id in 115 aa
NP_881904.1	Weakly similar to Yersinia pestis hypothetical phage protein Ypo2114 ypo2114 SWALL:Q8ZEP6 (EMBL:AJ414151) (194 aa) fasta scores: E(): 1.8e-08, 36.93% id in 111 aa
NP_881905.1	Similar to Rhizobium loti hypothetical protein MLR8012 TR:Q984G8 (EMBL:AP003013) (130 aa) fasta scores: E(): 0.25, 29.26% id in 123 aa
NP_881906.1	no significant database matches
NP_881911.1	Similar to Yersinia pestis hypothetical phage protein Ypo2108 ypo2108 SWALL:Q8ZEQ2 (EMBL:AJ414151) (370 aa) fasta scores: E(): 4.5e-51, 43.61% id in 360 aa, and to Deinococcus radiodurans head morphogenesis protein, dra0097 SWALL:Q9RZ57 (EMBL:AE001862) (253 aa) fasta scores: E(): 0.73, 23.44% id in 273 aa
NP_881912.1	Poor database matches. Similar to the N-terminal region of bacteriophage MB78 protein Gp62 TR:Q9T0Q3 (EMBL:Y19202) (540 aa) fasta scores: E(): 1.8e-30, 30.54% id in 455 aa
NP_881913.1	Similar to Bacillus subtilis PBSX phage terminase large subunit XtmB SW:XTMB_BACSU (P39786) (433 aa) fasta scores: E(): 0.39, 21.1% id in 417 aa, and to Yersinia pestis hypothetical protein YPMT1.24c TR:O68741 (EMBL:AF074611) (418 aa) fasta scores: E(): 9.3e-18, 27.23% id in 437 aa
NP_881914.1	Similar to Lactococcus lactis bacteriophage Tuc2009 hypothetical protein TR:Q9AYX3 (EMBL:AF109874) (153 aa) fasta scores: E(): 1.9e-11, 44.11% id in 102 aa, and to Bacillus halodurans hypothetical protein BH3534 TR:Q9K739 (EMBL:AP001519) (159 aa) fasta scores: E(): 7.4e-10, 41.12% id in 107 aa
NP_881915.1	transposase for IS481 element
NP_881916.1	no significant database matches
NP_881917.1	no significant database matches
NP_881918.1	No significant database matches to the full length CDS. C-terminus is similar to the C-terminal region of bacteriophage D3 repressor protein cI SW:RPC1_BPD3 (Q37906) (223 aa) fasta scores: E(): 1.9e-05, 28.67% id in 143 aa, and to Neisseria meningitidis  regulator nma1884 TR:Q9JTC1 (EMBL:AL162757) (234 aa) fasta scores: E(): 7e-06, 28.72% id in 188 aa
NP_881919.1	Poor database matches. Similar to Neisseria meningitidis hypothetical protein NNMB2100 TR:Q9JXD3 (EMBL:AE002559) (77 aa) fasta scores: E(): 2.4, 35.29% id in 51 aa
NP_881920.1	transposase for IS481 element
NP_881921.1	Similar to Rhizobium meliloti  transmembrane protein smc02882 TR:CAC41594 (EMBL:AL591782) (244 aa) fasta scores: E(): 0.09, 24.64% id in 211 aa
NP_881922.1	Similar to Ralstonia solanacearum  thioredoxin-like protein Rsc0067 or Rs02246 SWALL:Q8Y3B3 (EMBL:AL646057) (129 aa) fasta scores: E(): 7.1e-20, 51.12% id in 133 aa
NP_881923.1	Similar to Escherichia coli  ATP-dependent RNA helicase RhlE or b0797 SW:RHLE_ECOLI (P25888) (454 aa) fasta scores: E(): 9e-72, 50% id in 456 aa
NP_881924.1	Similar to Streptomyces avermitilis hypothetical 10.3 kDa protein TR:BAB69324 (EMBL:AB070950) (97 aa) fasta scores: E(): 0.00047, 33.67% id in 98 aa, and to Staphylococcus aureus (strain N315) hypothetical protein Sas001 or Sav0011 TR:BAB56173 (EMBL:AP003129) (109 aa) fasta scores: E(): 0.19, 26.47% id in 102 aa
NP_881925.1	Similar to Rhodobacter sphaeroides  membrane protein TR:Q9KX17 (EMBL:Y09560) (235 aa) fasta scores: E(): 1.5e-15, 28.94% id in 228 aa
NP_881926.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
NP_881927.1	Similar to Neisseria meningitidis hypothetical protein NMA0721 TR:Q9JVS1 (EMBL:AL162754) (67 aa) fasta scores: E(): 6.4e-07, 48.27% id in 58 aa
NP_881929.1	Similar to Escherichia coli hypothetical protein YheT or b3353 SW:YHET_ECOLI (P45524) (340 aa) fasta scores: E(): 1.1e-31, 36.8% id in 269 aa
NP_881930.1	Similar to Vibrio cholerae hypothetical protein Vc2164 TR:Q9KQ40 (EMBL:AE004288) (484 aa) fasta scores: E(): 8.4e-33, 31.91% id in 495 aa
NP_881931.1	Similar to Bacillus subtilis UTP--glucose-1-phosphate uridylyltransferase GtaB SW:GTAB_BACSU (Q05852) (292 aa) fasta scores: E(): 1.3e-50, 54.68% id in 267 aa
NP_881932.1	Weakly similar to Streptomyces coelicolor  integral membrane protein 2SCG58.15 TR:Q9FC98 (EMBL:AL391017) (316 aa) fasta scores: E(): 6.4e-07, 24.11% id in 282 aa
NP_881933.1	Previously described as Bordetella pertussis OmpQ TR:Q45342 (EMBL:U16266) (364 aa) fasta scores: E(): 1.5e-148, 99.72% id in 364 aa. Similar to Bordetella pertussis outer membrane porin protein precursor SW:OMP_BORPE (Q04064) (385 aa) fasta scores: E(): 2.4e-13, 34.25% id in 400 aa, and to Neisseria meningitidis major outer membrane protein Porb or nma0398 SW:OMB_NEIMA (P57042) (329 aa) fasta scores: E(): 7e-05, 24.5% id in 351 aa
NP_881934.1	transposase for IS481 element
NP_881935.1	transposase for IS481 element
NP_881937.1	Similar to Treponema pallidum conserved hypothetical integral membrane protein tp1034 TR:O83997 (EMBL:AE001271) (341 aa) fasta scores: E(): 0.00026, 26.87% id in 346 aa, and to Escherichia coli hypothetical protein YrbG or b3196 SW:YRBG_ECOLI (P45394) (325 aa) fasta scores: E(): 0.016, 25.64% id in 351 aa
NP_881938.1	Similar to Pseudomonas aeruginosa aminopeptidase P PepP or pa5224 TR:Q9HTW6 (EMBL:AE004935) (444 aa) fasta scores: E(): 7.3e-84, 51.14% id in 436 aa, and to Escherichia coli Xaa-Pro aminopeptidase PepP or b2908 SW:AMPP_ECOLI (P15034) (440 aa) fasta scores: E(): 2.2e-66, 44.95% id in 436 aa
NP_881940.1	Similar to Pseudomonas aeruginosa UbiH protein or pa5223 TR:Q9HTW7 (EMBL:AE004935) (394 aa) fasta scores: E(): 1.1e-26, 37.34% id in 399 aa, and to Escherichia coli 2-octaprenyl-6-methoxyphenol hydroxylase UbiH or VisB or b2907 SW:UBIH_ECOLI (P25534) (392 aa) fasta scores: E(): 1.3e-25, 34.17% id in 398 aa
NP_881941.1	Similar to many eg. Escherichia coli hypothetical protein YhdG or b3260 or z4620 or ecs4132 SW:YHDG_ECOLI (P25717) (321 aa) fasta scores: E(): 1.6e-63, 55.76% id in 321 aa
NP_881942.1	Similar to Escherichia coli, DNA-binding protein Fis or b3261 or z4621 or ecs4133 or stm3385 or sty3565 SW:FIS_ECOLI (P11028) (98 aa) fasta scores: E(): 1.9e-07, 40.9% id in 66 aa
NP_881943.1	involved in de novo purine biosynthesis
NP_881944.1	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity
NP_881945.1	plays an essential role in ATP-dependent branch migration of the Holliday junction
NP_881946.1	Similar to many proposed oxidoreductases eg. Caulobacter crescentus NADH-ubiquinone oxidoreductase 39 kDa subunit precursor cc3604 TR:Q9A2G1 (EMBL:AE006018) (319 aa) fasta scores: E(): 1.6e-35, 39.8% id in 309 aa
NP_881947.1	catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine
NP_881948.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
NP_881949.1	Similar to Escherichia coli ATP-dependent DNA helicase RecQ or b3822 SW:RECQ_ECOLI (P15043) (607 aa) fasta scores: E(): 2.3e-87, 45.07% id in 599 aa
NP_881950.1	transposase for IS481 element
NP_881951.1	Similar to Rhizobium meliloti  carbonic anhydrase TR:CAC47897 (EMBL:AL591793) (227 aa) fasta scores: E(): 3.7e-41, 50.47% id in 210 aa, and to Escherichia coli carbonic anhydrase CynT or b0339 or z0435 or ecs0392 SW:CYNT_ECOLI (P17582) (219 aa) fasta scores: E(): 1.1e-17, 31.4% id in 207 aa
NP_881952.1	Similar to Mycobacterium smegmatis nicotinamidase/pyrazinamidase PzaA TR:Q9ZHK8 (EMBL:AF058285) (468 aa) fasta scores: E(): 1.4e-42, 37.21% id in 481 aa, and to Pseudomonas putida amidase SW:AMID_PSEPU (O69768) (466 aa) fasta scores: E(): 4.4e-35, 37.75% id in 482 aa
NP_881955.1	Similar to Streptococcus pneumoniae branched-chain amino acid ABC transporter permease sp0750 TR:Q97RP9 (EMBL:AE007382) (289 aa) fasta scores: E(): 1.4e-27, 33.56% id in 286 aa, and to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport system permease BraD or pa1073 SW:BRAD_PSEAE (P21627) (307 aa) fasta scores: E(): 2.1e-13, 30.06% id in 296 aa
NP_881956.1	Similar to many predicted transporters eg. Rhizobium meliloti  high-affinity branched-chain amino acid transport ATP-binding ABC transporter protein smc02357 TR:CAC47163 (EMBL:AL591791) (244 aa) fasta scores: E(): 4.7e-23, 36.17% id in 235 aa, and to Thermotoga maritima ABC transporter ATP-binding protein Tm1054 TR:Q9X0E4 (EMBL:AE001765) (236 aa) fasta scores: E(): 1e-22, 34.61% id in 234 aa
NP_881957.1	Similar to Deinococcus radiodurans branched-chain amino acid ABC transporter ATP-binding protein Dra0260 TR:Q9RYP9 (EMBL:AE001863) (238 aa) fasta scores: E(): 6.1e-27, 41.35% id in 237 aa, and to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraG or pa1070 SW:BRAG_PSEAE (P21630) (233 aa) fasta scores: E(): 4e-22, 38.02% id in 213 aa
NP_881958.1	Similar to Pseudomonas aeruginosa sulfite reductase CysI TR:O31037 (EMBL:AF026066) (552 aa) fasta scores: E(): 1.5e-133, 64.31% id in 566 aa
NP_881959.1	Similar to Pseudomonas aeruginosa hypothetical protein PA1837 TR:Q9I2Q8 (EMBL:AE004609) (165 aa) fasta scores: E(): 1.4e-15, 37.34% id in 158 aa, and to Caulobacter crescentus hypothetical protein CC1120 TR:Q9A974 (EMBL:AE005790) (168 aa) fasta scores: E(): 1e-09, 35.57% id in 149 aa
NP_881960.1	Similar to Pasteurella haemolytica outer membrane lipoprotein 3 precursor PlpC SW:PLPC_PASHA (Q08870) (263 aa) fasta scores: E(): 1.2e-34, 41.5% id in 265 aa, and to Rhizobium meliloti  outer membrane lipoprotein transmembrane SMC03157 TR:CAC47467 (EMBL:AL591792) (258 aa) fasta scores: E(): 1.5e-39, 45.8% id in 262 aa
NP_881961.1	Similar to Arabidopsis thaliana hypothetical protein MZE19.4 TR:Q9LHE6 (EMBL:AP002050) (450 aa) fasta scores: E(): 1.2e-14, 31.69% id in 426 aa
NP_881962.1	transposase for IS481 element
NP_881963.1	Similar to Neisseria meningitidis CinA-related protein NMB2128 TR:Q9JXC2 (EMBL:AE002560) (266 aa) fasta scores: E(): 6.9e-42, 51.66% id in 240 aa, and to the N-terminal region of Streptococcus pneumoniae competence-damage protein CinA SW:CINA_STRPN (P54184) (418 aa) fasta scores: E(): 0.1, 24.51% id in 257 aa
NP_881964.1	Similar to Escherichia coli acetate operon repressor IclR SW:ICLR_ECOLI (P16528) (274 aa) fasta scores: E(): 1e-19, 30.76% id in 273 aa, and to Streptomyces coelicolor  transcriptional regulator SCAH10.11c TR:Q9RKU6 (EMBL:AL132824) (270 aa) fasta scores: E(): 4.8e-22, 37.4% id in 270 aa
NP_881965.1	Previously sequenced as Bordetella pertussis dermonecrotic toxin Dnt TR:Q45336 (EMBL:U10527) (1451 aa) fasta scores: E(): 0, 100% id in 1451 aa. Almost identical to Bordetella bronchiseptica dermonecrotizing toxin TR:Q9S5D5 (EMBL:AB020025) (1464 aa) fasta scores: E(): 0, 98.97% id in 1464 aa
NP_881966.1	Similar to Rhizobium meliloti hypothetical protein SMB20025 TR:CAC48428 (EMBL:AL603642) (325 aa) fasta scores: E(): 9.8e-62, 54.4% id in 318 aa, and to Agrobacterium tumefaciens hypothetical protein AGR_C_180p TR:AAK85936 (EMBL:AE007953) (337 aa) fasta scores: E(): 1.6e-58, 52.58% id in 310 aa
NP_881967.1	Similar to Alcaligenes eutrophus granule-associated protein PhaP TR:Q44013 (EMBL:X85729) (192 aa) fasta scores: E(): 5.6e-23, 44.79% id in 192 aa. Weakly similar to an internal region of Escherichia coli membrane protein involved in colicin uptake TolA SW:TOLA_ECOLI (P19934) (421 aa) fasta scores: E(): 1.4, 27.02% id in 185 aa
NP_881968.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors
NP_881969.1	Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate
NP_881970.1	Similar to the C-terminal region of Escherichia coli NADH pyrophosphatase NudC SW:NUDC_ECOLI (P32664) (257 aa) fasta scores: E(): 0.0015, 26.81% id in 179 aa, and to the full length Pseudomonas aeruginosa hypothetical protein PA3755 TR:Q9HXP0 (EMBL:AE004794) (184 aa) fasta scores: E(): 1.1e-37, 55.49% id in 173 aa
NP_881971.1	Similar to Vibrio cholerae LysR family transcriptional regulator VCA0982 TR:Q9KKW8 (EMBL:AE004424) (299 aa) fasta scores: E(): 2.6e-40, 42.25% id in 284 aa, and to Rhizobium loti transcriptional regulator MLL2784 TR:Q98HN8 (EMBL:AP003000) (307 aa) fasta scores: E(): 3e-41, 41.41% id in 297 aa
NP_881972.1	Similar to Bacillus halodurans hypothetical protein YfiD TR:Q9RC47 (EMBL:AB024562) (129 aa) fasta scores: E(): 6.6e-06, 36.44% id in 118 aa, and to Bacillus subtilis hypothetical protein YdfP TR:P96694 (EMBL:AB001488) (129 aa) fasta scores: E(): 4.2e-07, 35.48% id in 124 aa
NP_881973.1	Similar to Ralstonia solanacearum hypothetical protein Rsc0562 or Rs04903 SWALL:Q8Y1X5 (EMBL:AL646060) (195 aa) fasta scores: E(): 2.6e-19, 37.68% id in 207 aa
NP_881974.1	Poor database matches. C-terminus is similar to similar to Rhizobium meliloti  signal peptide protein SMC00809 TR:Q92RU0 (EMBL:AL591784) (88 aa) fasta scores: E(): 0.0094, 40.26% id in 77 aa. Possible alternative translational start site
NP_881975.1	transposase for IS481 element
NP_881976.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator PA0797 TR:Q9I5E1 (EMBL:AE004515) (240 aa) fasta scores: E(): 5.1e-09, 27.42% id in 237 aa, and to Streptomyces seoulensis  transcriptonal regulator PdhR TR:Q9JP85 (EMBL:AF047034) (207 aa) fasta scores: E(): 2.6e-08, 31.73% id in 208 aa
NP_881977.1	catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit
NP_881978.1	Similar to Comamonas testosteroni hypothetical protein OrfJ TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 2.4e-43, 44.41% id in 322 aa, and to Rhizobium meliloti hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 7.9e-44, 40.68% id in 322 aa
NP_881979.1	Similar to Escherichia coli alpha-ketoglutarate-dependent taurine dioxygenase TauD SW:TAUD_ECOLI (P37610) (282 aa) fasta scores: E(): 5.4e-31, 35.08% id in 285 aa, and to Pseudomonas aeruginosa taurine dioxygenase PA3935 TR:Q9HX81 (EMBL:AE004811) (277 aa) fasta scores: E(): 3.8e-35, 40.98% id in 283 aa
NP_881980.1	catalyzes the oxidative decarboxylation of malate to form pyruvate
NP_881981.1	Similar to Agrobacterium tumefaciens pca operon transcriptional activator PcaQ SW:PCAQ_AGRTU (P52668) (311 aa) fasta scores: E(): 4.6e-15, 28.8% id in 302 aa, and to Pseudomonas aeruginosa probable transcriptional regulator PA2206 TR:Q9I1R1 (EMBL:AE004647) (315 aa) fasta scores: E(): 2.4e-23, 30.36% id in 303 aa
NP_881982.1	Similar to Bacillus subtilis oligopeptide transport system permease AppB SW:APPB_BACSU (P42062) (317 aa) fasta scores: E(): 6.4e-39, 37.22% id in 317 aa, and to Rhizobium sp probable peptide ABC transporter permease Y4TP SW:Y4TP_RHISN (Q53191) (313 aa) fasta scores: E(): 1.7e-58, 51.43% id in 313 aa
NP_881983.1	Similar to Escherichia coli dipeptide transport system permease DppC SW:DPPC_ECOLI (P37315) (300 aa) fasta scores: E(): 5.6e-34, 38.04% id in 276 aa, and to Rhizobium loti ABC transporter permease MLR6290 TR:Q989T2 (EMBL:AP003008) (280 aa) fasta scores: E(): 6.8e-51, 52.06% id in 267 aa
NP_881984.1	Similar to Escherichia coli hypothetical ABC transporter ATP-binding protein YliA SW:YLIA_ECOLI (P75796) (629 aa) fasta scores: E(): 9.7e-133, 62.29% id in 602 aa. C-terminal region is similar to Bacillus subtilis oligopeptide transport ATP-binding protein AppF SW:APPF_BACSU (P42065) (329 aa) fasta scores: E(): 1.5e-47, 47.07% id in 325 aa
NP_881985.1	Similar to Rhizobium loti hypothetical protein MLL6676 TR:Q988M5 (EMBL:AP003009) (488 aa) fasta scores: E(): 2.7e-28, 31.18% id in 497 aa, and to Rhizobium meliloti hypothetical protein SMB21161 TR:CAC49227 (EMBL:AL603645) (477 aa) fasta scores: E(): 2.3e-25, 29.05% id in 499 aa
NP_881986.1	Similar to Escherichia coli cyn operon transcriptional activator CynR SW:CYNR_ECOLI (P27111) (311 aa) fasta scores: E(): 7.6e-13, 25.08% id in 295 aa, and to Rhizobium leguminosarum LysR family transcriptional regulator TR:Q52868 (EMBL:U39409) (300 aa) fasta scores: E(): 1.1e-18, 31.54% id in 298 aa
NP_881987.1	Poor database matches. C-terminus is similar to an internal region of Bordetella bronchiseptica  membrane protein BbLPS1.18c TR:O87991 (EMBL:AJ007747) (340 aa) fasta scores: E(): 1.2e-09, 30.3% id in 198 aa
NP_881988.1	Similar to Rhizobium meliloti hypothetical protein SMC01149 TR:CAC41808 (EMBL:AL591783) (160 aa) fasta scores: E(): 3.7e-20, 40.76% id in 157 aa, and to Caulobacter crescentus hypothetical protein CC3077 TR:Q9A3X4 (EMBL:AE005971) (158 aa) fasta scores: E(): 3.4e-18, 37.5% id in 152 aa
NP_881989.1	Similar to Rhizobium loti transcriptional regulator MLL3772 TR:Q98FH5 (EMBL:AP003002) (111 aa) fasta scores: E(): 1.5e-16, 47.27% id in 110 aa, and to Agrobacterium tumefaciens hypothetical protein AGR_C_3675p TR:AAK87782 (EMBL:AE008119) (124 aa) fasta scores: E(): 8.9e-17, 46.42% id in 112 aa. Also similar to BP2145, 43.137% identity (43.137% ungapped) in 102 aa overlap.
NP_881990.1	Similar to Escherichia coli suppressor of OmpF assembly mutants, outer membrane protein AsmA SW:ASMA_ECOLI (P28249) (617 aa) fasta scores: E(): 0.0063, 23.79% id in 395 aa, and to Vibrio cholerae AsmA protein VC1039 TR:Q9KT66 (EMBL:AE004185) (703 aa) fasta scores: E(): 5.5e-20, 25.44% id in 837 aa
NP_881991.1	Poor database matches. Similar to the N-terminal regions of Streptomyces coelicolor hypothetical protein SCG20A.02 TR:Q9K3N8 (EMBL:AL360055) (275 aa) fasta scores: E(): 0.025, 29.6% id in 125 aa, and Pseudomonas aeruginosa hypothetical protein PA3022 TR:Q9HZI4 (EMBL:AE004727) (268 aa) fasta scores: E(): 0.015, 31.06% id in 103 aa
NP_881992.1	Similar to Acinetobacter calcoaceticus benzoate membrane transport protein BenE SW:BENE_ACICA (P07775) (394 aa) fasta scores: E(): 1.1e-45, 40.21% id in 373 aa, and to Rhizobium loti hypothetical protein MLR5064 TR:Q98CP3 (EMBL:AP003005) (382 aa) fasta scores: E(): 3.5e-45, 39.72% id in 370 aa
NP_881993.1	Similar to Chromatium vinosum ferredoxin Fdx SW:FER_CHRVI (P00208) (82 aa) fasta scores: E(): 1.2e-17, 61.25% id in 80 aa, and to Pseudomonas aeruginosa ferredoxin PA0362 TR:Q9I6D2 (EMBL:AE004474) (83 aa) fasta scores: E(): 2.7e-21, 66.26% id in 83 aa
NP_881994.1	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA
NP_881995.1	Similar to Escherichia coli  methylase YhhF SW:YHHF_ECOLI (P10120) (198 aa) fasta scores: E(): 4.3e-24, 44.94% id in 198 aa, and to Salmonella enterica subspenterica serovar Typhi conserved hypothetical protein STY4239 TR:CAD08058 (EMBL:AL627281) (198 aa) fasta scores: E(): 1.2e-23, 45.02% id in 191 aa
NP_881996.1	Similar to the C-terminal regions of Escherichia coli cell division protein FtsY SW:FTSY_ECOLI (P10121) (497 aa) fasta scores: E(): 5.5e-34, 46.57% id in 350 aa, and Neisseria meningitidis cell division protein FtsY homologue NMA0291 SW:FTSY_NEIMA (P57010) (421 aa) fasta scores: E(): 4.1e-41, 54.15% id in 349 aa. Possibly truncated at the N-terminus
NP_881997.1	Similar to Escherichia coli phosphonates transport system permease PhnE b4013/b4104 SW:PHNE_ECOLI (P16683) (276 aa) fasta scores: E(): 2.1e-22, 33.33% id in 246 aa, and to Bacillus halodurans alkylphosphonate ABC tranporter PH2976 TR:Q9K8M9 (EMBL:AP001517) (266 aa) fasta scores: E(): 1.9e-27, 37.03% id in 270 aa
NP_881998.1	Similar to Escherichia coli phosphonates transport system permease PhnE SW:PHNE_ECOLI (P16683) (276 aa) fasta scores: E(): 4.8e-31, 39.54% id in 263 aa, and to Pseudomonas stutzeri  inner membrane component of binding-protein-dependent phosphite transporter protein PtxC TR:O69053 (EMBL:AF061070) (275 aa) fasta scores: E(): 2.4e-26, 36.96% id in 257 aa
NP_881999.1	transposase for IS481 element
NP_882000.1	Weakly similar to Escherichia coli phosphonates-binding periplasmic protein precursor PhnD SW:PHND_ECOLI (P16682) (338 aa) fasta scores: E(): 6.7e-09, 23.91% id in 276 aa, and to Pseudomonas stutzeri binding protein component of binding-protein-dependent phosphite transporter PtxB TR:O69052 (EMBL:AF061070) (287 aa) fasta scores: E(): 6.9e-14, 28.13% id in 263 aa
NP_882001.1	Similar to Streptomyces coelicolor glycerol operon regulatory protein GylR SW:GYLR_STRCO (P15360) (254 aa) fasta scores: E(): 3.9e-09, 26.74% id in 258 aa, and to Pseudomonas aeruginosa probable transcriptional regulator PA2010 TR:Q9I2A1 (EMBL:AE004627) (267 aa) fasta scores: E(): 7.1e-22, 34.45% id in 267 aa
NP_882002.1	Poor database matches. Weakly similar to Mycobacterium leprae hypothetical protein ML0089 TR:Q9CDB9 (EMBL:AL583917) (281 aa) fasta scores: E(): 2.2, 25.44% id in 279 aa, and to Streptomyces coelicolor conserved hypothetical protein SCD16A.02c TR:Q9XAS3 (EMBL:AL078618) (269 aa) fasta scores: E(): 6.9, 26.54% id in 275 aa
NP_882003.1	bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis
NP_882004.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
NP_882005.1	Regulates rRNA biosynthesis by transcriptional antitermination
NP_882006.1	catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP
NP_882007.1	Similar to Escherichia coli phosphatidylglycerophosphatase A PgpA SW:PGPA_ECOLI (P18200) (172 aa) fasta scores: E(): 1e-15, 39.31% id in 145 aa, and to Pseudomonas aeruginosa phosphatidylglycerophosphatase A PA4050 TR:Q9HWX8 (EMBL:AE004821) (171 aa) fasta scores: E(): 1.2e-21, 39.28% id in 168 aa
NP_882008.1	Similar to Enterobacter agglomerans hypothetical protein SW:YGAD_ENTAG (P51967) (164 aa) fasta scores: E(): 7.4e-22, 50.6% id in 166 aa, and to the C-terminal region of Streptococcus pneumoniae  competence-damage protein CinA SW:CINA_STRPN (P54184) (418 aa) fasta scores: E(): 5.1e-08, 37.33% id in 150 aa. CDS contains extra residues at the N-terminus in comparison to orthologues
NP_882009.1	OMP decarboxylase; OMPDCase; OMPdecase; type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase
NP_882010.1	Similar to Escherichia coli NADH dehydrogenase Ndh SW:DHNA_ECOLI (P00393) (433 aa) fasta scores: E(): 1.6e-60, 43.18% id in 433 aa, and to Pseudomonas fluorescens NADH dehydrogenase II Ndh TR:Q9KGX0 (EMBL:AF281147) (432 aa) fasta scores: E(): 3.5e-68, 46.89% id in 435 aa
NP_882011.1	Similar to Escherichia coli diacylglycerol kinase DgkA SW:KDGL_ECOLI (P00556) (121 aa) fasta scores: E(): 8.8e-15, 46.61% id in 118 aa, and to Pseudomonas aeruginosa diacylglycerol kinase PA3603 TR:Q9HY23 (EMBL:AE004780) (123 aa) fasta scores: E(): 6.6e-19, 50% id in 120 aa
NP_882012.1	Similar to Bordetella pertussis serum resistance protein BrkB TR:Q45339 (EMBL:U12276) (296 aa) fasta scores: E(): 3.8e-111, 100% id in 296 aa. Similar to the N-terminal region of Rhizobium loti hypothetical protein MLL2378 TR:Q98IJ2 (EMBL:AP002999) (339 aa) fasta scores: E(): 3.1e-35, 39.28% id in 280 aa
NP_882013.1	Previously sequenced as Bordetella pertussis serum resistance protein BrkA TR:Q45340 (EMBL:U12276) (1010 aa) fasta scores: E(): 0, 100% id in 1010 aa. Similar to Bordetella pertussis pertactin precursor Prn SW:PERT_BORPE (P14283) (910 aa) fasta scores: E(): 4.2e-52, 38.36% id in 915 aa
NP_882014.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth
NP_882015.1	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring
NP_882016.1	No significant database matches to the full length CDS. N-terminus is similar to the N-terminal region of Agrobacterium tumefaciens AGR_L_563p TR:AAK88851 (EMBL:AE008228) (228 aa) fasta scores: E(): 8.2e-07, 36.58% id in 82 aa. Also similar to BP3499, 40.385% identity (41.584% ungapped) in 208 aa overlap.
NP_882017.1	Similar to Bordetella bronchiseptica arylmalonate decarboxylase SW:AMDA_BORBR (Q05115) (240 aa) fasta scores: E(): 3.9e-06, 27.31% id in 216 aa, and to Pyrococcus horikoshii hypothetical arylmalonate decarboxylase PH1150 TR:O58884 (EMBL:AP000005) (236 aa) fasta scores: E(): 5.2e-15, 30% id in 210 aa. Possible alternative translational start site
NP_882018.1	No significant database matches to the full length CDS. N-terminus is similar to the N-terminal region of Agrobacterium tumefaciens AGR_L_563p TR:AAK88851 (EMBL:AE008228) (228 aa) fasta scores: E(): 9.4e-05, 38.15% id in 76 aa. Also similar to BP3497, 40.385% identity (41.584% ungapped) in 208 aa overlap.
NP_882019.1	proposed role in polysaccahride synthesis
NP_882020.1	Similar to Rhizobium meliloti hypothetical protein SMA1927 TR:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 5e-38, 39.22% id in 311 aa, and to Comamonas testosteroni hypothetical protein OrfJ TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1.3e-35, 36.67% id in 319 aa
NP_882021.1	Similar to Caulobacter crescentus isoleucine biosynthesis transcriptional activator IlvR SW:ILVR_CAUCR (P52670) (296 aa) fasta scores: E(): 1.8e-12, 27.45% id in 244 aa, and to Neisseria meningitidis  LysR-family transcriptional regulator NMA1437 TR:Q9JRJ3 (EMBL:AL162755) (304 aa) fasta scores: E(): 4.1e-16, 27.81% id in 284 aa
NP_882022.1	proposed role in polysaccahride synthesis
NP_882023.1	transposase for IS481 element
NP_882024.1	Similar to Escherichia coli pyrazinamidase/nicotinamidase [includes: pyrazinamidase; nicotinamidase] PncA SW:PNCA_ECOLI (P21369) (213 aa) fasta scores: E(): 2.1e-07, 31.81% id in 198 aa, and to Pseudomonas aeruginosa hypothetical protein PA4918 TR:Q9HUP5 (EMBL:AE004905) (219 aa) fasta scores: E(): 3.9e-49, 67.35% id in 193 aa
NP_882025.1	Limited database matches to the full length CDS. Similar to Escherichia coli hypothetical protein YhcK TR:P77793 (EMBL:AE000246) (460 aa) fasta scores: E(): 1.2e-52, 34.74% id in 449 aa. N-terminus is similar to the N-terminal region of Rhizobium loti response regulator protein mll0859 TR:Q98LV6 (EMBL:AP002995) (408 aa) fasta scores: E(): 5.9e-20, 48.48% id in 165 aa
NP_882026.1	Similar to Bacillus halodurans hypothetical protein BH3794 TR:Q9K6D5 (EMBL:AP001520) (231 aa) fasta scores: E(): 2.9e-13, 31.76% id in 170 aa, and to the C-terminal region of Thermotoga maritima conserved hypothetical protein TM1699 TR:Q9X225 (EMBL:AE001810) (558 aa) fasta scores: E(): 3.3e-23, 42.1% id in 171 aa. Possible gene remnant resulting from the insertion of the upstream IS element and subsequent recombination events
NP_882027.1	transposase for IS481 element
NP_882028.1	No significan database matches
NP_882031.1	Similar to Mycobacterium tuberculosis hypothetical protein MTV025.049c TR:O69669 (EMBL:AL022121) (321 aa) fasta scores: E(): 1.1e-25, 35.14% id in 313 aa. N-terminal region is similar to Streptomyces coelicolor hypothetical protein SCM1.46 TR:Q9RCZ8 (EMBL:AL133422) (251 aa) fasta scores: E(): 7.8e-26, 43.85% id in 244 aa
NP_882032.1	Similar to Rhizobium loti hypothetical protein MLL2445 TR:Q98ID9 (EMBL:AP002999) (200 aa) fasta scores: E(): 1.6, 24.61% id in 195 aa, and to Agrobacterium tumefaciens hypothetical protein AGR_pAT_413p TR:AAK90663 (EMBL:AE007898) (199 aa) fasta scores: E(): 2, 26.37% id in 182 aa
NP_882033.1	C-terminus is similar to the C-terminal region of Bacillus firmus cardiolipin synthetase Cls SW:CLS_BACFI (O66043) (503 aa) fasta scores: E(): 7.5e-18, 33.41% id in 389 aa, and to Bacillus subtilis probable cardiolipin synthetase 1 YwiE SW:CLS1_BACSU (P45860) (500 aa) fasta scores: E(): 9.5e-19, 32.11% id in 383 aa
NP_882034.1	transposase for IS481 element
NP_882035.1	transposase for IS481 element
NP_882036.1	Similar to Pseudomonas aeruginosa hypothetical protein PA3602 TR:Q9HY24 (EMBL:AE004780) (536 aa) fasta scores: E(): 1.1e-144, 65.1% id in 533 aa. Internal region of the CDS is similar to an internal region of Porphyra purpurea ferredoxin-dependent glutamate synthase GltB SW:GLSF_PORPU (P51375) (1538 aa) fasta scores: E(): 6.9e-22, 32.84% id in 341 aa
NP_882037.1	Similar to Pseudomonas aeruginosa hypothetical protein PA5430 TR:Q9HTD6 (EMBL:AE004955) (404 aa) fasta scores: E(): 1.7e-89, 63.59% id in 401 aa, and to Rhizobium meliloti hypothetical protein SMB21550 TR:CAC49391 (EMBL:AL603645) (413 aa) fasta scores: E(): 1.9e-74, 52.81% id in 409 aa. Possible alternative translational start site
NP_882038.1	Similar to Agrobacterium tumefaciens hypothetical protein AGR_C_3303p TR:AAK87565 (EMBL:AE008100) (312 aa) fasta scores: E(): 1.2e-22, 32.81% id in 320 aa, and to Rhizobium meliloti  malonate transporter SMC00317 SW:MDCF_RHIME (P56949) (320 aa) fasta scores: E(): 7.4e-22, 31.94% id in 313 aa
NP_882039.1	Similar to Bacillus halodurans hypothetical protein BH1438 TR:Q9KCY1 (EMBL:AP001512) (144 aa) fasta scores: E(): 4.1e-15, 38.73% id in 142 aa, and to Pseudomonas aeruginosa probable acetyl transferase PA2631 TR:Q9I0K7 (EMBL:AE004691) (141 aa) fasta scores: E(): 9.9e-15, 40.87% id in 137 aa. Possible alternative translational start site
NP_882040.1	Similar to Pseudomonas aeruginosa hypothetical protein PA1424 TR:Q9I3S0 (EMBL:AE004572) (203 aa) fasta scores: E(): 2.8e-39, 58.91% id in 202 aa, and to Vibrio cholerae hypothetical protein VC1980 TR:Q9KQL8 (EMBL:AE004273) (200 aa) fasta scores: E(): 1.3e-15, 34.67% id in 199 aa
NP_882041.1	Similar to Shigella flexneri ribonuclease R VacB SW:RNR_SHIFL (P30851) (770 aa) fasta scores: E(): 6.2e-76, 46.18% id in 773 aa, and to Vibrio cholerae ribonuclease R VC2599 TR:Q9KNY1 (EMBL:AE004327) (821 aa) fasta scores: E(): 8.7e-92, 46.41% id in 836 aa
NP_882042.1	Similar to Neisseria meningitidis TrmH family RNA methyltransferase NMB0931 TR:Q9JZR3 (EMBL:AE002444) (250 aa) fasta scores: E(): 3.4e-50, 56.96% id in 244 aa, and to Burkholderia sp. hypothetical protein YjfH TR:Q9RED7 (EMBL:AJ242786) (247 aa) fasta scores: E(): 2.6e-47, 55.14% id in 243 aa
NP_882043.1	Similar to Corynebacterium glutamicum cystathionine gamma-synthase MetB TR:Q9RQ97 (EMBL:AF126953) (386 aa) fasta scores: E(): 1.2e-21, 32.43% id in 407 aa, and to Clostridium acetobutylicum O-acetylhomoserine sulfhydrylase CAC0102 TR:Q97MT9 (EMBL:AE007523) (409 aa) fasta scores: E(): 8.4e-46, 32.18% id in 407 aa
NP_882044.1	Previously sequenced as Bordetella bronchiseptica hypothetical protein TR:Q9S3N8 (EMBL:AJ132742) (226 aa) fasta scores: E(): 2e-91, 100% id in 226 aa. Similar to Pseudomonas aeruginosa hypothetical protein PA4515 TR:Q9HVQ7 (EMBL:AE004865) (226 aa) fasta scores: E(): 3.4e-61, 66.37% id in 226 aa
NP_882045.1	Similar to Escherichia coli DNA-binding protein Hu-beta HupB SW:DBHB_ECOLI (P02341) (90 aa) fasta scores: E(): 2.9e-20, 71.11% id in 90 aa. Previously sequenced as Bordetella pertussis DNA-binding protein Hu-beta HupB TR:Q9R336 (EMBL:AJ132741) (90 aa) fasta scores: E(): 1.1e-30, 100% id in 90 aa
NP_882046.1	Previously sequenced as Bordetella pertussis siderophore-mediated iron transport protein TonB TR:Q9S3M6 (EMBL:AJ132741) (266 aa) fasta scores: E(): 2.2e-64, 100% id in 266 aa. Similar to Pseudomonas aeruginosa siderophore-mediated iron transport protein TonB SW:TONB_PSEAE (Q51368) (342 aa) fasta scores: E(): 8.2e-11, 34.9% id in 255 aa. Contains a proline rich region, residues 74 to 150
NP_882047.1	C-terminal region is similar to Escherichia coli inner membrane protein that maintains integrity of cell envelope and tolerance to group A colicins TolQ SW:TOLQ_ECOLI (P05828) (230 aa) fasta scores: E(): 2.1e-13, 31.87% id in 229 aa. Previously sequenced as Bordetella pertussis  biopolymer transport protein ExbB TR:Q9S3M5 (EMBL:AJ132741) (325 aa) fasta scores: E(): 1.2e-103, 100% id in 325 aa
NP_882048.1	Similar to Escherichia coli biopolymer transport protein ExbD SW:EXBD_ECOLI (P18784) (141 aa) fasta scores: E(): 2.1e-09, 31.53% id in 130 aa. Previously sequenced as Bordetella pertussis  biopolymer transport protein ExbD TR:Q9S3M4 (EMBL:AJ132741) (155 aa) fasta scores: E(): 4.4e-53, 100% id in 155 aa
NP_882049.1	Two-component regulatory system family, response regulator protein. Similar to Salmonella typhimurium transcriptional regulatory protein TctD SW:TCTD_SALTY (P22104) (224 aa) fasta scores: E(): 1.3e-29, 43.37% id in 219 aa. Previously sequenced as Bordetella pertussis transcriptional  regulatory protein BasR TR:Q9S3M3 (EMBL:AJ132741) (223 aa) fasta scores: E(): 3.4e-81, 100% id in 223 aa. Similar to BP2547, 53.881% identity (53.881% ungapped) in 219 aa overlap
NP_882050.1	Two-component regulatory system family, sensor kinase. No significant database matches to the full length CDS. C-terminus is similar to the C-terminal regions of Escherichia coli sensor protein BasS SW:BASS_ECOLI (P30844) (363 aa) fasta scores: E(): 5.4e-19, 32.29% id in 288 aa, and Rhizobium loti two-component system, sensor protein MLL7952 TR:Q984L4 (EMBL:AP003013) (452 aa) fasta scores: E(): 3.9e-28, 38.83% id in 291 aa
NP_882051.1	Similar to Escherichia coli minor potassium uptake system protein Kup SW:KUP_ECOLI (P30016) (622 aa) fasta scores: E(): 3.8e-114, 50.48% id in 616 aa, and to Pseudomonas aeruginosa potassium uptake protein PA0917 TR:Q9I540 (EMBL:AE004526) (634 aa) fasta scores: E(): 2.2e-122, 53.54% id in 635 aa
NP_882052.1	catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis
NP_882053.1	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation
NP_882054.1	catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine
NP_882055.1	Similar to Ralstonia solanacearum hypothetical protein rsc2555 rsc2555 or rs00734 SWALL:Q8XWB9 (EMBL:AL646070) (117 aa) fasta scores: E(): 6.2e-20, 60.63% id in 94 aa
NP_882056.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator PA2877 TR:Q9HZX0 (EMBL:AE004714) (297 aa) fasta scores: E(): 1e-67, 60.46% id in 301 aa, and to Pseudomonas aeruginosa probable transcriptional regulator PA2534 TR:Q9I0V0 (EMBL:AE004681) (303 aa) fasta scores: E(): 1.2e-45, 46.1% id in 295 aa
NP_882057.1	Similar to Picea abies short-chain type dehydrogenase/reductase SW:SDR1_PICAB (Q08632) (271 aa) fasta scores: E(): 2.1e-15, 31.25% id in 240 aa, and to Pseudomonas aeruginosa probable short-chain dehydrogenase PA2918 TR:Q9HZS9 (EMBL:AE004718) (257 aa) fasta scores: E(): 1.8e-69, 82.57% id in 241 aa
NP_882058.1	Similar to Hyphomicrobium methylovorum glycerate dehydrogenase SW:DHGY_HYPME (P36234) (321 aa) fasta scores: E(): 9.8e-27, 32.29% id in 322 aa, and to Agrobacterium tumefaciens hypothetical protein AGR_L_379p TR:AAK88759 (EMBL:AE008217) (311 aa) fasta scores: E(): 1.6e-49, 47.26% id in 311 aa
NP_882059.1	Similar to Rhizobium meliloti hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 9.7e-43, 39.62% id in 318 aa, and to Agrobacterium tumefaciens hypothetical protein AGR_L_312p TR:AAK88723 (EMBL:AE008213) (329 aa) fasta scores: E(): 1.6e-39, 38.8% id in 317 aa
NP_882060.1	Poor database matches. Similar to C-terminal region of Comamonas testosteroni hypothetical protein Orf5 TR:Q9S154 (EMBL:AB024335) (278 aa) fasta scores: E(): 0.21, 33.33% id in 54 aa. Possible gene remnant
NP_882061.1	Similar to Corynebacterium glutamicum dihydrodipicolinate synthase DapA SW:DAPA_CORGL (P19808) (301 aa) fasta scores: E(): 1.8, 20.35% id in 280 aa, and to Rhizobium meliloti hypothetical protein SMB20107 TR:CAC48507 (EMBL:AL603642) (318 aa) fasta scores: E(): 2.4e-43, 41.15% id in 294 aa
NP_882062.1	Similar to Escherichia coli pyruvate dehydrogenase complex repressor PdhR SW:PDHR_ECOLI (P06957) (254 aa) fasta scores: E(): 1.3e-13, 33.9% id in 233 aa, and to Rhizobium meliloti  transcription regulator protein SMC04143 TR:CAC41496 (EMBL:AL591782) (240 aa) fasta scores: E(): 4.9e-37, 49.15% id in 236 aa
NP_882063.1	transposase for IS481 element
NP_882064.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator PA1235 TR:Q9I4A3 (EMBL:AE004553) (260 aa) fasta scores: E(): 1.6e-13, 42.14% id in 242 aa, and to Rhizobium loti probable transcriptional regulator MLL2686 TR:Q98HW2 (EMBL:AP003000) (292 aa) fasta scores: E(): 5.4e-14, 39.92% id in 253 aa
NP_882065.1	Similar to Mycobacterium tuberculosis, and Mycobacterium bovis AhpD protein or rv2429 or mt2504 or mtcy428.17C SWALL:AHPD_MYCTU (SWALL:Q57353) (177 aa) fasta scores: E(): 2e-12, 37.95% id in 166 aa, and to Ralstonia solanacearum  antioxidant protein AhpD or rsc1645 or rs04020 SWALL:Q8XYW1 (EMBL:AL646065) (175 aa) fasta scores: E(): 4.1e-41, 63.58% id in 173 aa
NP_882066.1	Similar to Streptomyces coelicolor alkyl hydroperoxide reductase AhpC SWALL:Q9RN72 (EMBL:AF186371) (184 aa) fasta scores: E(): 9.6e-31, 51.09% id in 182 aa, and to Ralstonia solanacearum  alkyl hydroperoxide reductase AhpC2 or rsc1646 or rs04022 SWALL:Q8XYW0 (EMBL:AL646065) (230 aa) fasta scores: E(): 2.4e-63, 85.16% id in 182 aa
NP_882067.1	part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation
NP_882068.1	N-terminal region is similar to Pseudomonas aeruginosa hypothetical protein PA3685 TR:Q9HXV5 (EMBL:AE004788) (226 aa) fasta scores: E(): 3.2e-14, 40% id in 235 aa. C-terminal region is similar to Escherichia coli ribosomal-protein-alanine acetyltransferase RimI SW:RIMI_ECOLI (P09453) (148 aa) fasta scores: E(): 9.7e-10, 36.84% id in 133 aa. Full length CDS is similar to Mycobacterium leprae hypothetical protein ML0378 SW:YY21_MYCLE (Q49857) (359 aa) fasta scores: E(): 1.8e-05, 30.4% id in 375 aa
NP_882069.1	C-terminus is similar to the C-terminal regions of Rhizobium loti MLL7705 TR:Q985F0 (EMBL:AP003012) (291 aa) fasta scores: E(): 9.6e-24, 46.66% id in 255 aa, and Treponema pallidum bacteriophage-type DNA polymerase TP0229 TR:O83257 (EMBL:AE001204) (277 aa) fasta scores: E(): 5e-23, 46.18% id in 223 aa. Possible alternative translational start site
NP_882070.1	Similar to Escherichia coli hypothetical protein YgeD SW:YGED_ECOLI (P39196) (397 aa) fasta scores: E(): 4.7e-21, 37.19% id in 414 aa, and to Neisseria meningitidis  integral membrane protein NMA1715 TR:Q9JTM1 (EMBL:AL162756) (436 aa) fasta scores: E(): 2.2e-05, 23.38% id in 449 aa
NP_882071.1	Similar to Bacillus subtilis chromosome partition protein Smc SW:SMC_BACSU (P51834) (1186 aa) fasta scores: E(): 2.8e-30, 29.01% id in 1213 aa, and to Pseudomonas aeruginosa hypothetical protein PA1527 TR:Q9I3I6 (EMBL:AE004581) (1162 aa) fasta scores: E(): 3.6e-59, 40.7% id in 1199 aa
NP_882072.1	Poor database matches. C-terminus is similar to the C-terminal region of Neisseria meningitidis hypothetical protein NMB0667 TR:Q9K0E2 (EMBL:AE002421) (428 aa) fasta scores: E(): 0.00024, 24.05% id in 316 aa
NP_882073.1	Similar to Escherichia coli DNA ligase LigA SW:DNLJ_ECOLI (P15042) (671 aa) fasta scores: E(): 3e-82, 54.4% id in 693 aa, and to Alteromonas haloplanktis DNA ligase TR:Q9RBF2 (EMBL:AF126866) (672 aa) fasta scores: E(): 2.1e-81, 53.92% id in 688 aa
NP_882074.1	Similar to Campylobacter jejuni cell binding factor 2 precursor Cbf2 SW:CBF2_CAMJE (Q46105) (273 aa) fasta scores: E(): 8.7e-17, 30.25% id in 271 aa, and to Rhizobium meliloti  outer membrane protein SMC02451 TR:CAC47205 (EMBL:AL591791) (284 aa) fasta scores: E(): 3.3e-16, 31.98% id in 272 aa
NP_882075.1	Similar to Escherichia coli general stress response protein and possible regulator of murein genes, BolA SW:BOLA_ECOLI (P15298) (105 aa) fasta scores: E(): 0.00043, 36.84% id in 76 aa, and to Neisseria meningitidis hypothetical protein NMA2143 TR:Q9JST5 (EMBL:AL162758) (92 aa) fasta scores: E(): 1.8e-09, 43.9% id in 82 aa
NP_882076.1	Similar to Shigella flexneri intracellular septation protein IspZ SW:ISPZ_SHIFL (P95745) (179 aa) fasta scores: E(): 6e-28, 42.85% id in 182 aa, and to Escherichia coli, and probable intracellular septation protein IspZ SW:ISPZ_ECOLI (P21366) (179 aa) fasta scores: E(): 1.4e-29, 44.5% id in 182 aa
NP_882077.1	this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress
NP_882078.1	Similar to Deinococcus radiodurans ABC transporter ATP-binding protein DR2469 TR:Q9RRL9 (EMBL:AE002076) (226 aa) fasta scores: E(): 5.9e-39, 59.72% id in 221 aa, and to Rhizobium meliloti  ATP-binding ABC transporter protein SMC00962 TR:CAC45462 (EMBL:AL591785) (226 aa) fasta scores: E(): 1.9e-33, 52.25% id in 222 aa
NP_882079.1	Similar to Deinococcus radiodurans conserved hypothetical protein DR2468 TR:Q9RRM0 (EMBL:AE002076) (198 aa) fasta scores: E(): 1.1e-21, 46.76% id in 201 aa, and to Rhizobium meliloti hypothetical transmembrane protein SMC00963 TR:CAC45461 (EMBL:AL591785) (201 aa) fasta scores: E(): 2.5e-19, 43.41% id in 205 aa
NP_882080.1	Similar to Bacillus sphaericus biotin synthase BioY SW:BIOY_BACSH (P22819) (196 aa) fasta scores: E(): 1.1e-08, 33.51% id in 188 aa, and to Rhizobium meliloti hypothetical transmembrane protein SMC00964 TR:CAC45460 (EMBL:AL591785) (187 aa) fasta scores: E(): 2e-28, 54.64% id in 183 aa
NP_882081.1	N-terminus is similar to the N-terminal region of Salmonella typhimurium Leu/Ile/Val/Thr-binding protein precursor LivJ SW:LIVJ_SALTY (P17215) (365 aa) fasta scores: E(): 3.1e-06, 23.12% id in 294 aa. Full length CDS is similar to Deinococcus radiodurans branched-chain amino acid ABC transporter periplasmic amino acid- binding protein DRA0263 TR:Q9RYP6 (EMBL:AE001863) (424 aa) fasta scores: E(): 4.5e-83, 57.25% id in 400 aa. Similar to BP1506, 52.926% identity (53.495% ungapped) in 376 aa overlap
NP_882082.1	Similar to Escherichia coli high-affinity branched-chain amino acid transport system permease LivH SW:LIVH_ECOLI (P08340) (308 aa) fasta scores: E(): 2.4e-11, 27.62% id in 333 aa, and to Deinococcus radiodurans branched-chain amino acid ABC transporter permease DRA0262 TR:Q9RYP7 (EMBL:AE001863) (349 aa) fasta scores: E(): 5.4e-63, 59.88% id in 344 aa
NP_882083.1	Similar to Streptomyces coelicolor  branched amino acid transport system permease sco7184 or sc8a11.12 SWALL:Q9FBZ8 (EMBL:AL391041) (349 aa) fasta scores: E(): 9e-21, 32.23% id in 335 aa; Due to a large deletion following codon 519, this CDS may have resulted from the fusion of two adjacent CDSs. N-terminal region is similar to Streptomyces coelicolor branched amino acid transport system permease sco7184 or sc8a11.12 SWALL:Q9FBZ8 (EMBL:AL391041) (349 aa) fasta scores: E(): 9e-21, 32.23% id in 335 aa. C-terminal region is similar to Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivG SW:LIVG_ECOLI (P22730) (255 aa) fasta scores: E(): 2e-23, 40.56% id in 249 aa. Full length CDS is similar to Agrobacterium tumefaciens hypothetical protein AGR_C_2606p TR:AAK87203 (EMBL:AE008066) (595 aa) fasta scores: E(): 2e-94, 54.18% id in 585 aa
NP_882084.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
NP_882085.1	Similar to Escherichia coli glycine betaine-binding periplasmic protein precursor ProX SW:PROX_ECOLI (P14177) (330 aa) fasta scores: E(): 1.8e-07, 23.07% id in 338 aa, and to Rhizobium meliloti  periplasmic binding transmembrane protein SMC02378 TR:CAC45606 (EMBL:AL591785) (332 aa) fasta scores: E(): 5.6e-37, 32.51% id in 326 aa. Also similar to BP2055, 53.012% identity (53.659% ungapped) in 332 aa overlap.
NP_882086.1	Similar to Agrobacterium tumefaciens hypothetical protein AGR_L_1453p TR:AAK89305 (EMBL:AE008271) (335 aa) fasta scores: E(): 1.2e-57, 58.87% id in 321 aa, and to Rhizobium meliloti  permease ABC transporter protein SMC03117 TR:CAC47555 (EMBL:AL591792) (330 aa) fasta scores: E(): 1.3e-56, 60.46% id in 301 aa
NP_882087.1	Similar to Rhizobium meliloti  permease ABC transporter protein SMC03118 TR:CAC47554 (EMBL:AL591792) (295 aa) fasta scores: E(): 5.6e-77, 72.1% id in 294 aa, and to Agrobacterium tumefaciens hypothetical protein AGR_L_1455p TR:AAK89306 (EMBL:AE008271) (295 aa) fasta scores: E(): 1.3e-76, 71.42% id in 294 aa
NP_882088.1	Similar to Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC SW:BRAC_PSEAE (P21175) (373 aa) fasta scores: E(): 0.0012, 20.4% id in 343 aa, and to Agrobacterium tumefaciens hypothetical protein AGR_L_1462p TR:AAK89309 (EMBL:AE008271) (402 aa) fasta scores: E(): 1e-77, 51.25% id in 400 aa
NP_882089.1	Similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraG SW:BRAG_PSEAE (P21630) (233 aa) fasta scores: E(): 3.1e-24, 39.91% id in 233 aa, and to Rhizobium meliloti ATP-binding ABC transporter protein SMC03119 TR:CAC47553 (EMBL:AL591792) (233 aa) fasta scores: E(): 3.3e-50, 59.65% id in 233 aa
NP_882090.1	Similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraF SW:BRAF_PSEAE (P21629) (255 aa) fasta scores: E(): 2.7e-27, 39.84% id in 256 aa, and to Rhizobium meliloti ATP-binding ABC transporter protein SMC03120 TR:CAC47552 (EMBL:AL591792) (262 aa) fasta scores: E(): 4.8e-45, 57.61% id in 243 aa
NP_882091.1	Similar to Escherichia coli endonuclease III Nth SW:END3_ECOLI (P20625) (211 aa) fasta scores: E(): 3e-56, 71.15% id in 208 aa, and to Pseudomonas aeruginosa endonuclease III PA3495 TR:Q9HYB4 (EMBL:AE004770) (212 aa) fasta scores: E(): 1.6e-59, 73.68% id in 209 aa
NP_882092.1	Involved in the electron transport chain
NP_882093.1	Similar to Alcaligenes eutrophus intracellular poly[D(-)-3-hydroxybutyrate] (PHB) depolymerase PhaZ TR:O87189 (EMBL:AB017612) (419 aa) fasta scores: E(): 1.2e-107, 64.8% id in 412 aa, and to Rhizobium meliloti hypothetical protein SMC02770 TR:CAC41411 (EMBL:AL591782) (424 aa) fasta scores: E(): 6.4e-85, 52.69% id in 408 aa
NP_882094.1	Similar to Azotobacter vinelandii ferredoxin--NADP reductase Fpr SW:FENR_AZOVI (Q44532) (257 aa) fasta scores: E(): 1.4e-28, 37.59% id in 258 aa, and to Pseudomonas aeruginosa probable oxidoreductase PA4615 TR:Q9HVH6 (EMBL:AE004875) (258 aa) fasta scores: E(): 9.6e-43, 46.81% id in 267 aa. Also similar to BP1606, 40.385% identity (42.276% ungapped) in 260 aa overlap.
NP_882095.1	Similar to Pseudomonas stutzeri ferredoxin SW:FER_PSEST (P08811) (106 aa) fasta scores: E(): 3e-28, 67.92% id in 106 aa, and to Azotobacter vinelandii ferredoxin I FdxA SW:FER1_AZOVI (P00214) (106 aa) fasta scores: E(): 2e-27, 67.3% id in 104 aa
NP_882096.1	catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate
NP_882097.1	Similar to Haemophilus ducreyi hypothetical protein Hypo117 SW:Y117_HAEDU (O30825) (117 aa) fasta scores: E(): 3e-25, 60.17% id in 113 aa, and to Xylella fastidiosa hypothetical protein XF1711 TR:Q9PCR7 (EMBL:AE003995) (117 aa) fasta scores: E(): 6.2e-23, 59.29% id in 113 aa
NP_882098.1	Similar to Streptomyces coelicolor hypothetical protein SCF56.21 TR:Q9RD46 (EMBL:AL133424) (151 aa) fasta scores: E(): 2.6e-12, 40.47% id in 168 aa, and to Mycobacterium leprae hypothetical protein ML1525 TR:Q9CBV8 (EMBL:AL583922) (151 aa) fasta scores: E(): 4.1e-10, 38.78% id in 165 aa
NP_882099.1	Similar to Pseudomonas aeruginosa hypothetical protein PA4030 TR:Q9HWZ7 (EMBL:AE004820) (276 aa) fasta scores: E(): 2.8e-06, 40.97% id in 266 aa, and to Escherichia coli hypothetical protein YeeI SW:YEEI_ECOLI (P76346) (265 aa) fasta scores: E(): 0.0081, 32.61% id in 279 aa
NP_882100.1	Similar to Escherichia coli GTP pyrophosphokinase RelA SW:RELA_ECOLI (P11585) (744 aa) fasta scores: E(): 5.3e-78, 40.89% id in 719 aa, and to Pseudomonas aeruginosa GTP pyrophosphokinase PA0934 TR:Q9I524 (EMBL:AE004528) (747 aa) fasta scores: E(): 3.2e-112, 43.78% id in 740 aa
NP_882101.1	catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine
NP_882102.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
NP_882103.1	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis
NP_882104.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits
NP_882105.1	transposase for IS481 element
NP_882106.1	one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity
NP_882107.1	Similar to Salmonella typhimurium vitamin B12 receptor precursor BtuB SW:BTUB_SALTY (P37409) (614 aa) fasta scores: E(): 5.4e-37, 28.33% id in 614 aa, and to Pseudomonas aeruginosa probable tonb-dependent receptor PA1271 TR:Q9I473 (EMBL:AE004557) (616 aa) fasta scores: E(): 3.2e-39, 35.2% id in 625 aa
NP_882108.1	Similar to Salmonella typhimurium cobalamin periplasmic binding protein BtuF TR:Q9ZFP9 (EMBL:AF096877) (266 aa) fasta scores: E(): 2.9e-15, 34.66% id in 251 aa, and to Vibrio cholerae hypothetical protein VC2381 TR:Q9KPI6 (EMBL:AE004308) (276 aa) fasta scores: E(): 4e-24, 38.82% id in 255 aa
NP_882109.1	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate
NP_882110.1	Similar to Escherichia coli phosphomethylpyrimidine kinase ThiD SW:THID_ECOLI (P76422) (266 aa) fasta scores: E(): 3e-44, 51.47% id in 272 aa, and to Rhizobium meliloti phosphomethylpyrimidine kinase SMB20962 TR:CAC49487 (EMBL:AF070520) (266 aa) fasta scores: E(): 2.1e-43, 52.07% id in 265 aa. CDS contains extra residues at the N-terminus in comparison to orthologues
NP_882111.1	Similar to Escherichia coli protein-L-isoaspartate O-methyltransferase Pcm SW:PIMT_ECOLI (P24206) (207 aa) fasta scores: E(): 2.9e-16, 39.42% id in 175 aa, and to Neisseria meningitidis protein-L-isoaspartate O-methyltransferase NMB1885 TR:Q9JXU0 (EMBL:AE002538) (218 aa) fasta scores: E(): 8e-28, 46.81% id in 220 aa
NP_882112.1	Similar to the C-terminal region of Escherichia coli ADP-heptose synthase RfaE SW:RFAE_ECOLI (P76658) (477 aa) fasta scores: E(): 2.8e-20, 48.36% id in 153 aa, and to the full length Alcaligenes eutrophus Aut TR:Q43999 (EMBL:U07639) (164 aa) fasta scores: E(): 2.6e-35, 65.45% id in 165 aa
NP_882113.1	Similar to Neisseria meningitidis invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 3.3e-17, 28.165% id in 316 aa and Acinetobacter spSE19. pilin inverting protein ChnY TR:Q9F7E1 (EMBL:AF282240) (324 aa) fasta scores: E(): 7.4e-50, 47.205% id in 322 aa
NP_882114.1	Similar to Rhizobium meliloti hypothetical protein SMA0447 TR:AAK64892 (EMBL:AE007216) (373 aa) fasta scores: E(): 1.4e-29, 33.61% id in 357 aa, and to Pseudomonas aeruginosa hypothetical protein PA1625 TR:Q9I397 (EMBL:AE004590) (355 aa) fasta scores: E(): 2.7e-22, 29.22% id in 349 aa
NP_882115.1	Poor database matches. Weakly similar to Homo sapiens peroxisomal phytanoyl-CoA dioxygenase PHYH SW:PAHX_HUMAN (O14832) (338 aa) fasta scores: E(): 1.4e-08, 24.08% id in 245 aa, and to Caenorhabditis elegans probable phytanoyl-CoA dioxygenase ZK550.6 SW:PAHX_CAEEL (O62515) (312 aa) fasta scores: E(): 3.7e-06, 21.81% id in 243 aa
NP_882116.1	Similar to Escherichia coli  potassium channel protein Kch SW:KCH_ECOLI (P31069) (417 aa) fasta scores: E(): 5.6e-43, 39.73% id in 375 aa, and to Halobacterium sp potassium channel homologue VNG1847G TR:Q9HP16 (EMBL:AE005085) (411 aa) fasta scores: E(): 2.2e-19, 29.42% id in 333 aa. Possibly truncated at the C-terminus by the insertion of the downstream IS element
NP_882117.1	transposase for IS481 element
NP_882118.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
NP_882119.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
NP_882120.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
NP_882121.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
NP_882122.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
NP_882123.2	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
NP_882124.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
NP_882125.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
NP_882126.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
NP_882127.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
NP_882128.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
NP_882129.1	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation
NP_882130.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
NP_882131.1	one of the stabilizing components for the large ribosomal subunit
NP_882132.1	primary binding protein; helps mediate assembly; involved in translation fidelity
NP_882133.1	Similar to Acidovorax sp. SA1 D-(-)-3-hydroxybutyrate oligomer hydrolase TR:Q9F1T8 (EMBL:AB044565) (291 aa) fasta scores: E(): 1.3e-65, 58.8% id in 284 aa, and to Rickettsia conorii hypothetical protein RC0617 TR:AAL03155 (EMBL:AE008622) (290 aa) fasta scores: E(): 3e-15, 27.44% id in 266 aa
NP_882134.1	Similar to Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD SW:GABD_ECOLI (P25526) (482 aa) fasta scores: E(): 3.4e-75, 43.12% id in 473 aa, and to Acinetobacter sp. 6-oxohexanoate dehydrogenase ChnE TR:BAB61739 (EMBL:AB006902) (477 aa) fasta scores: E(): 1.2e-117, 60.75% id in 474 aa
NP_882135.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
NP_882136.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
NP_882137.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
NP_882138.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif
NP_882139.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
NP_882140.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
NP_882141.1	binds 5S rRNA along with protein L5 and L25
NP_882142.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
NP_882143.1	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7
NP_882144.1	late assembly protein
NP_882145.1	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase
NP_882146.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
NP_882147.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif
NP_882148.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
NP_882149.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
NP_882150.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
NP_882151.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
NP_882152.1	is a component of the macrolide binding site in the peptidyl transferase center
NP_882153.1	Similar to Escherichia coli, and Escherichia coli O157:H7 periplasmic divalent cation tolerance protein CutA or CycY or CutA1 or b4137 or z5742 or ecs5118 SWALL:CUTA_ECOLI (SWALL:P36654) (112 aa) fasta scores: E(): 1.3e-10, 38.54% id in 96 aa, and to Methanopyrus kandleri uncharacterized protein implicated in tolerance to divalent cations CutA or mk1492 SWALL:Q8TVA0 (EMBL:AE010440) (102 aa) fasta scores: E(): 2.1e-15, 50% id in 100 aa
NP_882154.1	Similar to Pseudomonas aeruginosa thiol:disulfide interchange protein DipZ SW:DSD1_PSEAE (Q9HUW5) (591 aa) fasta scores: E(): 6.8e-53, 41.54% id in 609 aa, and to Neisseria meningitidis thiol:disulfide interchange protein NMA1719 SW:DSBD_NEIMA (Q9JTL9) (601 aa) fasta scores: E(): 2.5e-63, 37.76% id in 617 aa
NP_882155.1	Similar to Bacillus halodurans hypothetical protein BH1741 TR:Q9KC33 (EMBL:AP001513) (306 aa) fasta scores: E(): 3.1e-22, 33.21% id in 283 aa, and to Pseudomonas aeruginosa hypothetical protein PA4287 TR:Q9HWB3 (EMBL:AE004845) (296 aa) fasta scores: E(): 2e-16, 31.59% id in 307 aa
NP_882156.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
NP_882157.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
NP_882158.1	Similar to Azotobacter vinelandii cytochrome c4 precursor CycA SW:CYC4_AZOVI (P43302) (210 aa) fasta scores: E(): 2.2e-18, 39.89% id in 193 aa, and to Pseudomonas stutzeri cytochrome c4 precursor CC4 SW:CYC4_PSEST (Q52369) (210 aa) fasta scores: E(): 9.6e-18, 37.82% id in 193 aa. Possible alternative translational start sites
NP_882159.1	Similar to Neisseria meningitidis  cytochrome c-type biogenesis protein NMB1804 TR:Q9JY04 (EMBL:AE002530) (671 aa) fasta scores: E(): 3.1e-46, 37.75% id in 694 aa, and to Thiobacillus ferrooxidans cytochrome c-type maturation protein ResB TR:Q9ZG10 (EMBL:AF220499) (591 aa) fasta scores: E(): 2.1e-39, 31.79% id in 673 aa
NP_882160.1	C-terminus is similar to the C-terminal region of Chlamydomonas reinhardtii cytochrome c biogenesis protein CcsA SW:CCSA_CHLRE (P48269) (353 aa) fasta scores: E(): 1.4e-16, 32.75% id in 287 aa. Similar to Neisseria meningitidis  cytochrome c-type biogenesis protein NMB1803 TR:Q9JY05 (EMBL:AE002530) (395 aa) fasta scores: E(): 1.3e-41, 48.81% id in 422 aa
NP_882161.1	Similar to Pseudomonas aeruginosa diaminopimelate decarboxylase LysA SW:DCDA_PSEAE (P19572) (415 aa) fasta scores: E(): 4.3e-93, 62.31% id in 414 aa, and to Vibrio cholerae diaminopimelate decarboxylase VC0125 SW:DCDA_VIBCH (Q9KVL7) (417 aa) fasta scores: E(): 7.7e-93, 59.28% id in 420 aa
NP_882162.1	Similar to hypothetical protein Escherichia coli CyaY SW:CYAY_ECOLI (P27838) (106 aa) fasta scores: E(): 7.7e-13, 37.03% id in 108 aa, and to Vibrio cholerae hypothetical protein VC0123 SW:CYAY_VIBCH (Q9KVL8) (104 aa) fasta scores: E(): 2.2e-13, 44.34% id in 106 aa
NP_882163.1	Similar to Escherichia coli penicillin-binding protein 1A MrcA SW:PBPA_ECOLI (P02918) (850 aa) fasta scores: E(): 2.2e-84, 37.45% id in 841 aa, and to Pseudomonas aeruginosa penicillin-binding protein 1A PA5045 SW:PBPA_PSEAE (Q07806) (822 aa) fasta scores: E(): 2.6e-85, 40.69% id in 774 aa. Similar to BP0905, 67.640% identity (68.473% ungapped) in 822 aa overlap
NP_882164.1	catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis
NP_882165.1	catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis
NP_882166.1	dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate
NP_882167.1	Similar to Dianthus caryophyllus glutathione S-transferase 1 Gst1 SW:GTZ1_DIACA (P28342) (221 aa) fasta scores: E(): 2.2e-07, 31.6% id in 174 aa, and to Rhizobium meliloti  glutathione S-transferase TR:CAC47844 (EMBL:AL591793) (215 aa) fasta scores: E(): 1.3e-35, 50.23% id in 211 aa
NP_882168.1	Similar to Haemophilus influenzae excinuclease ABC subunit A UvrA SW:UVRA_HAEIN (P44410) (943 aa) fasta scores: E(): 0, 65.01% id in 949 aa, and to Salmonella typhimurium excinuclease ABC subunit A UvrA SW:UVRA_SALTY (P37434) (941 aa) fasta scores: E(): 0, 65.15% id in 950 aa
NP_882169.1	Weakly similar to Escherichia coli tetracycline resistance protein TetA SW:TCR3_ECOLI (P02981) (396 aa) fasta scores: E(): 5.4e-10, 26.78% id in 392 aa. Similar to the N-terminal region of Pseudomonas aeruginosa probable MFS transporter PA4233 TR:Q9HWG1 (EMBL:AE004840) (462 aa) fasta scores: E(): 2.2e-58, 48.07% id in 389 aa
NP_882170.1	Similar to Proteus mirabilis single-strand binding protein Ssb SW:SSB_PROMI (P28046) (173 aa) fasta scores: E(): 2.4e-27, 56.72% id in 171 aa, and to Serratia marcescens single-strand binding protein Ssb SW:SSB_SERMA (P25762) (175 aa) fasta scores: E(): 3.9e-27, 56.32% id in 174 aa
NP_882171.1	Similar to Vibrio anguillarum ferric anguibactin receptor precursor FatA SW:FATA_VIBAN (P11461) (726 aa) fasta scores: E(): 1.9e-33, 24.84% id in 664 aa, and to Pseudomonas aeruginosa probable TonB-dependent receptor protein PA1910 TR:Q9I2J4 (EMBL:AE004617) (804 aa) fasta scores: E(): 6.2e-37, 28.2% id in 741 aa. Highly similar to Bordetella bronchiseptica unidentified ferric siderophore receptor BfrC TR:P94274 (EMBL:U79564) (724 aa) fasta scores: E(): 0, 98.61% id in 724 aa
NP_882172.1	Similar to Pseudomonas aeruginosa hypothetical protein PA4095 TR:Q9HWT3 (EMBL:AE004825) (177 aa) fasta scores: E(): 2e-14, 32.23% id in 152 aa, and to Alcaligenes sp. 2,4'-dihydroxyacetophenone dioxygenase Dad TR:Q9REI7 (EMBL:AJ133820) (176 aa) fasta scores: E(): 3.3e-12, 31.69% id in 142 aa
NP_882173.1	Similar to Pseudomonas chlororaphis hypothetical protein TR:Q9L3W5 (EMBL:AJ271325) (336 aa) fasta scores: E(): 5.5e-29, 35.42% id in 319 aa, and to Alcaligenes eutrophus plasmid pENH91 hypothetical protein TR:Q9WXD0 (EMBL:AB019032) (336 aa) fasta scores: E(): 7.2e-29, 35.42% id in 319 aa
NP_882174.1	Similar to Streptomyces coelicolor  GntR-family regulatory protein SC6F7.27c TR:Q9KZB5 (EMBL:AL353870) (261 aa) fasta scores: E(): 3e-05, 28% id in 250 aa, and to Deinococcus radiodurans GntR family transcriptional regulator DRA0211 TR:Q9RYU6 (EMBL:AE001863) (279 aa) fasta scores: E(): 2.3e-07, 28.38% id in 229 aa
NP_882175.1	Similar to Pseudomonas putida plasmid NAH7 transcriptional activator protein NahR SW:NAHR_PSEPU (P10183) (300 aa) fasta scores: E(): 3.5e-26, 33.09% id in 278 aa, and to Ralstonia sp. U2 plasmid pWWU2 LysR-like regulator protein NagR TR:Q9EXL7 (EMBL:AF036940) (301 aa) fasta scores: E(): 2.2e-26, 35.12% id in 279 aa
NP_882176.1	Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline
NP_882177.1	Similar to Rhizobium meliloti hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 3.6e-35, 36.84% id in 323 aa, and to Comamonas testosteroni hypothetical protein OrfJ TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 3e-34, 36.19% id in 326 aa
NP_882178.1	Similar to Xylella fastidiosa hypothetical protein XF1470 TR:Q9PDA9 (EMBL:AE003977) (376 aa) fasta scores: E(): 4e-28, 43.31% id in 374 aa. Weak similarity to Rhizobium meliloti lipopolysaccharide core biosynthesis glycosyl transferase LpsE SW:LPSE_RHIME (Q9R9N1) (340 aa) fasta scores: E(): 1.1e-11, 29.49% id in 339 aa. Similar to BP2331, 69.315% identity (69.315% ungapped) in 365 aa overlap
NP_882179.1	Poor database matches. Weakly similar to Escherichia coli hypothetical protein YrbL SW:YRBL_ECOLI (P46021) (210 aa) fasta scores: E(): 0.024, 25.88% id in 197 aa. Also similar to BP2342, 45.673% identity (47.500% ungapped) in 208 aa overlap.
NP_882180.1	Similar to Salmonella typhimurium transcriptional activator protein MetR SW:METR_SALTY (P05984) (317 aa) fasta scores: E(): 1.9e-09, 25.67% id in 296 aa, and to Pseudomonas aeruginosa probable transcriptional regulator PA0816 TR:Q9I5C3 (EMBL:AE004516) (294 aa) fasta scores: E(): 4e-11, 27.39% id in 303 aa
NP_882181.1	Similar to Escherichia coli taurine-binding periplasmic protein precursor TauA SW:TAUA_ECOLI (Q47537) (320 aa) fasta scores: E(): 5.4e-18, 31.84% id in 292 aa, and to Rhizobium meliloti  taurine uptake ABC transporter periplasmic solute-binding protein TR:CAC49365 (EMBL:AL603645) (339 aa) fasta scores: E(): 1.7e-17, 31.02% id in 332 aa
NP_882182.1	Similar to Escherichia coli taurine transport system permease TauC SW:TAUC_ECOLI (Q47539) (275 aa) fasta scores: E(): 3.3e-34, 37.34% id in 241 aa, and to Pseudomonas aeruginosa probable permease of ABC taurine transporter PA3936 TR:Q9HX80 (EMBL:AE004811) (272 aa) fasta scores: E(): 1e-37, 39.5% id in 243 aa
NP_882183.1	Similar to Escherichia coli taurine transport ATP-binding protein TauB SW:TAUB_ECOLI (Q47538) (255 aa) fasta scores: E(): 3.2e-30, 41.5% id in 253 aa, and to Rhizobium loti ATP-binding protein of ABC transporter MLL1253 TR:Q98KZ4 (EMBL:AP002997) (267 aa) fasta scores: E(): 8.4e-44, 47.65% id in 256 aa
NP_882184.1	Similar to Pseudomonas aeruginosa hypothetical protein PA4186 TR:Q9HWJ5 (EMBL:AE004835) (439 aa) fasta scores: E(): 9.9e-53, 37.26% id in 432 aa, and to Agrobacterium tumefaciens hypothetical protein AGR_L_1791p TR:AAK89468 (EMBL:AE008288) (468 aa) fasta scores: E(): 2.6e-27, 33.18% id in 446 aa
NP_882186.1	Similar to Streptomyces coelicolor positive regulator of secondary metabolite formation and sporulation CprA TR:O66121 (EMBL:AB000384) (215 aa) fasta scores: E(): 0.0019, 25% id in 164 aa, and to Streptomyces coelicolor  TetR-family transcriptional regulator SCK13.32 TR:Q9AD73 (EMBL:AL512667) (200 aa) fasta scores: E(): 9.3e-12, 30.61% id in 196 aa. Possible alternative translational start sites
NP_882187.1	catalyzes the formation of malate from glyoxylate and acetyl-CoA
NP_882188.1	Similar to Agrobacterium tumefaciens conserved hypothetical protein AGR_C_1727p TR:AAK86751 (EMBL:AE008025) (366 aa) fasta scores: E(): 3e-75, 54.59% id in 359 aa, and to Bacillus stearothermophilus L-lysine dehydrogenase LysDH TR:Q9AJC6 (EMBL:AB052732) (385 aa) fasta scores: E(): 7.2e-15, 29.25% id in 376 aa
NP_882189.1	No significant database matches. Similar to N-terminal region of Ralstonia solanacearum probable flagellar hook-length control protein FliK TR:CAD17546 (EMBL:AL646078) (516 aa) fasta scores: E(): 9.2, 43.59% id in 39 aa. Similar to BP0266, BP1766, BP2719, BP3090, and BP3731
NP_882190.1	catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway
NP_882191.1	Similar to Thermococcus litoralis alanine glyoxylate transaminase Agt TR:Q9C4M4 (EMBL:AB033996) (407 aa) fasta scores: E(): 5.7e-34, 34.76% id in 397 aa, and to Pyrococcus abyssi aminotransferase PAB2227 TR:Q9V282 (EMBL:AJ248283) (410 aa) fasta scores: E(): 5.1e-68, 47.44% id in 392 aa
NP_882192.1	Similar to Xylella fastidiosa hypothetical protein XF1230 TR:Q9PDZ8 (EMBL:AE003957) (162 aa) fasta scores: E(): 6.4e-38, 60.39% id in 154 aa. N-terminal region is weakly similar to N-terminus of Escherichia coli xanthosine phosphorylase XapA SW:XAPA_ECOLI (P45563) (277 aa) fasta scores: E(): 2.1, 29.32% id in 133 aa
NP_882193.1	Similar to Nicotiana sylvestris dihydrodipicolinate synthase DHDPS-R1 TR:Q42940 (EMBL:X79060) (308 aa) fasta scores: E(): 4e-07, 26.61% id in 263 aa, and to Neisseria meningitidis dihydrodipicolinate synthase NMA1124 SW:DAPA_NEIMA (Q9JUU9) (291 aa) fasta scores: E(): 3.2e-13, 32.39% id in 284 aa
NP_882194.1	Similar to Escherichia coli hypothetical protein YgaU SW:UP04_ECOLI (P39169) (148 aa) fasta scores: E(): 1.3e-18, 49.32% id in 148 aa, and to Pseudomonas aeruginosa hypothetical protein PA5178 TR:Q9HU11 (EMBL:AE004930) (145 aa) fasta scores: E(): 6e-22, 54.11% id in 146 aa. Contains LysM (lysin motif) found in bacterial cell wall degradation enzymes
NP_882195.1	Weakly similar to Pseudomonas aeruginosa hypothetical protein PA0380 TR:Q9I6B5 (EMBL:AE004475) (66 aa) fasta scores: E(): 9.2e-10, 54.54% id in 66 aa, and to Caulobacter crescentus hypothetical protein CC1881 TR:Q9A745 (EMBL:AE005862) (66 aa) fasta scores: E(): 4.8e-09, 50% id in 66 aa
NP_882196.1	Similar to Serratia marcescens proline iminopeptidase Pip SW:PIP_SERMA (O32449) (317 aa) fasta scores: E(): 3.1e-81, 63.34% id in 311 aa, and to Rhizobium meliloti  proline iminopeptidase TR:CAC45694 (EMBL:AL591786) (316 aa) fasta scores: E(): 1.8e-86, 66.77% id in 310 aa
NP_882197.1	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine
NP_882198.1	Similar to Rhodobacter capsulatus LysR-type transcriptional activator CbbRI TR:O34014 (EMBL:U87283) (298 aa) fasta scores: E(): 1.1e-17, 31.89% id in 301 aa, and to Pseudomonas aeruginosa probable transcriptional regulator PA0877 TR:Q9I568 (EMBL:AE004522) (298 aa) fasta scores: E(): 3.7e-42, 42.21% id in 289 aa
NP_882199.1	Similar to Rattus norvegicus hydroxymethylglutaryl-CoA lyase, mitochondrial precursor HMGCL SW:HMGL_RAT (P97519) (325 aa) fasta scores: E(): 5.1e-38, 41.17% id in 272 aa, and to Bacillus subtilis hypothetical protein YngG TR:O34873 (EMBL:Z99113) (299 aa) fasta scores: E(): 2.6e-44, 48.17% id in 274 aa
NP_882200.1	Similar to Rhizobium meliloti hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.7e-36, 43.35% id in 256 aa, and to Agrobacterium tumefaciens AGR_L_312p TR:AAK88723 (EMBL:AE008213) (329 aa) fasta scores: E(): 2e-33, 39.4% id in 269 aa
NP_882201.1	transposase for IS481 element
NP_882202.1	Weakly similar to Rhizobium loti transcriptional regulator MLL4768 TR:Q98DC1 (EMBL:AP003004) (260 aa) fasta scores: E(): 1.1e-06, 24.49% id in 245 aa, and to Agrobacterium tumefaciens AGR_L_2068p agr_l_2068 TR:AAK89608 (EMBL:AE008303) (327 aa) fasta scores: E(): 1.2e-06, 26.31% id in 228 aa. Possible alternative translational start sites. Also similar to BP3702, 45.353% identity (46.743% ungapped) in 269 aa overlap.
NP_882203.1	Similar to Rhizobium meliloti hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 3.7e-37, 37.23% id in 325 aa, and to Agrobacterium tumefaciens AGR_L_312p TR:AAK88723 (EMBL:AE008213) (329 aa) fasta scores: E(): 2.9e-35, 35.86% id in 329 aa
NP_882204.1	Similar to Bacillus subtilis  aliphatic sulfonates binding protein precursor SsuA SW:SSUA_BACSU (P40400) (332 aa) fasta scores: E(): 2.1e-12, 28.88% id in 270 aa, and to Rhizobium loti taurine transport system periplasmic protein MLR4517 TR:Q98DW7 (EMBL:AP003004) (337 aa) fasta scores: E(): 2.5e-10, 25.07% id in 351 aa. Also similar to BP3704, 53.666% identity (54.464% ungapped) in 341 aa overlap
NP_882205.1	Similar to Pseudomonas putida histidine utilization repressor HutC SW:HUTC_PSEPU (P22773) (248 aa) fasta scores: E(): 3.5e-06, 27.38% id in 252 aa, and to Pseudomonas syringae HutC-like protein TR:Q9AGU6 (EMBL:AF326719) (249 aa) fasta scores: E(): 2.8e-07, 26.64% id in 274 aa. Also similar to BP3699, 45.353% identity (46.743% ungapped) in 269 aa overlap.
NP_882206.1	Similar to Escherichia coli taurine transport system permease TauC SW:TAUC_ECOLI (Q47539) (275 aa) fasta scores: E(): 1.9e-33, 36.32% id in 256 aa, and to Pseudomonas aeruginosa probable permease of ABC taurine transporter PA3936 TR:Q9HX80 (EMBL:AE004811) (272 aa) fasta scores: E(): 1.4e-30, 37.34% id in 241 aa
NP_882207.1	Similar to Rhizobium loti taurine transport system periplasmic protein MLR4517 TR:Q98DW7 (EMBL:AP003004) (337 aa) fasta scores: E(): 7e-07, 25.44% id in 334 aa> N-terminus is similar to the N-terminal region of Bacillus subtilis  aliphatic sulfonates binding protein precursor SsuA SW:SSUA_BACSU (P40400) (332 aa) fasta scores: E(): 1.1e-09, 28.33% id in 240 aa. Also similar to BP3701, 54.227% identity (55.689% ungapped) in 343 aa overlap
NP_882208.1	Similar to Escherichia coli taurine transport ATP-binding protein TauB SW:TAUB_ECOLI (Q47538) (255 aa) fasta scores: E(): 4.8e-33, 44.04% id in 252 aa, and to Rhizobium loti ATP-binding protein of ABC transporter MLL1253 TR:Q98KZ4 (EMBL:AP002997) (267 aa) fasta scores: E(): 2.1e-43, 49.07% id in 271 aa
NP_882209.1	Similar to Clostridium acetobutylicum 3-hydroxybutyryl-CoA dehydratase Crt SW:CRT_CLOAB (P52046) (261 aa) fasta scores: E(): 6.5e-26, 38.95% id in 249 aa, and to Thauera aromatica  E-phenylitaconyl-CoA hydratase BbsH TR:Q9KJE7 (EMBL:AF173961) (256 aa) fasta scores: E(): 9e-28, 39.84% id in 256 aa
NP_882210.1	Similar to Comamonas testosteroni hypothetical protein Orf4 TR:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 4.6e-34, 36.36% id in 319 aa, and to Rhizobium meliloti hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 8.8e-36, 36.65% id in 311 aa
NP_882211.1	Similar to Caulobacter crescentus zinc-containing alcohol dehydrogenase CC0770 TR:Q9AA38 (EMBL:AE005752) (325 aa) fasta scores: E(): 8.5e-43, 43.71% id in 334 aa, and to Rhodocyclus gelatinosus hypothetical protein TR:Q9JP93 (EMBL:AB034704) (326 aa) fasta scores: E(): 1.7e-42, 42.9% id in 331 aa
NP_882212.1	Similar to Rhodococcus sp. AD45  racemase IsoG TR:Q9RBP6 (EMBL:AJ249207) (405 aa) fasta scores: E(): 1.1e-50, 38% id in 400 aa, and to Streptomyces coelicolor racemase SCF41.21 TR:Q9RJU8 (EMBL:AL117387) (403 aa) fasta scores: E(): 4.8e-41, 37.56% id in 402 aa. Similar to BP0416, 52.525% identity (53.061% ungapped) in 396 aa overlap
NP_882213.1	Similar to Mycobacterium tuberculosis hypothetical protein MTV032.01 TR:O53641 (EMBL:AL021927) (214 aa) fasta scores: E(): 1.4e-07, 30.39% id in 204 aa, and to Streptomyces coelicolor  TetR transcriptional regulator SCI30A.12c TR:Q9S261 (EMBL:AL096811) (251 aa) fasta scores: E(): 3.3e-05, 29.26% id in 205 aa
NP_882214.1	Similar to Escherichia coli NADH pyrophosphatase NudC SW:NUDC_ECOLI (P32664) (257 aa) fasta scores: E(): 2.8e-27, 46.98% id in 166 aa. Similar to Pasteurella multocida NADH pyrophosphatase PM1735 SW:NUDC_PASMU (P57965) (264 aa) fasta scores: E(): 5e-31, 39.18% id in 245 aa
NP_882215.1	Similar to Pseudomonas pseudoalcaligenes phenoxybenzoate dioxygenase beta subunit PobB SW:POBB_PSEPS (Q52186) (319 aa) fasta scores: E(): 4.9e-32, 40.88% id in 318 aa, and to Pseudomonas sp CA10 reductase component TR:Q9AQN2 (EMBL:AB047548) (315 aa) fasta scores: E(): 2.9e-44, 49.13% id in 289 aa
NP_882216.1	Similar to Pseudomonas putida amidase SW:AMID_PSEPU (O69768) (466 aa) fasta scores: E(): 1.1e-18, 32.71% id in 434 aa, and to Bradyrhizobium japonicum malonamidase E2 TR:Q9ZIV5 (EMBL:AF012735) (432 aa) fasta scores: E(): 1.1e-39, 39.53% id in 387 aa. Also similar toBP0130, 45.679% identity (47.804% ungapped) in 405 aa overlap.
NP_882217.1	No significant database matches to the full length CDS. C-terminal region is similar to an internal region of Pseudomonas aeruginosa probable oxidoreductase PA5234 TR:Q9HTV6 (EMBL:AE004936) (325 aa) fasta scores: E(): 2.8e-05, 27.45% id in 204 aa, and Pseudomonas aeruginosa probable oxidoreductase PA3256 TR:Q9HYY4 (EMBL:AE004748) (320 aa) fasta scores: E(): 9.5e-05, 26.75% id in 228 aa
NP_882218.1	Similar to Erwinia chrysanthemi hydrogen peroxide-inducible genes activator OxyR SW:OXYR_ERWCH (Q9X725) (305 aa) fasta scores: E(): 2.9e-15, 27.92% id in 308 aa, and to Pseudomonas aeruginosa probable transcriptional regulator PA0218 TR:Q9I6S0 (EMBL:AE004459) (306 aa) fasta scores: E(): 1.6e-29, 34.42% id in 305 aa
NP_882219.1	Similar to Salmonella typhimurium Leu/Ile/Val/Thr-binding protein precursor LivJ SW:LIVJ_SALTY (P17215) (365 aa) fasta scores: E(): 6.8e-10, 24.49% id in 343 aa, and to Streptomyces coelicolor  branched amino acid binding secreted protein SC8A11.13 TR:Q9FBZ7 (EMBL:AL391041) (396 aa) fasta scores: E(): 6.9e-25, 29.91% id in 361 aa
NP_882220.1	Similar to Escherichia coli hypothetical protein YlbE SW:YLBE_ECOLI (P77129) (419 aa) fasta scores: E(): 2.8e-27, 32.27% id in 409 aa, and to Streptomyces coelicolor hypothetical protein SC3F9.09 TR:O69949 (EMBL:AL023862) (363 aa) fasta scores: E(): 0.11, 29.28% id in 379 aa
NP_882221.1	N-terminal region is similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraF SW:BRAF_PSEAE (P21629) (255 aa) fasta scores: E(): 7.3e-23, 38.15% id in 249 aa. Full length CDS is similar to Agrobacterium tumefaciens hypothetical protein AGR_pTi_138p TR:AAK91029 (EMBL:AE007933) (528 aa) fasta scores: E(): 1.6e-23, 29.79% id in 527 aa. CDS appears to contain two similar domains, N-terminal half of the protein is similar to the C-terminal half
NP_882222.1	Similar to the C-terminal region of Escherichia coli high-affinity branched-chain amino acid transport system permease LivM SW:LIVM_ECOLI (P22729) (425 aa) fasta scores: E(): 8.4e-09, 29.73% id in 333 aa, and to the full length Streptomyces coelicolor  branched amino acid transport system permease SC8A11.12 TR:Q9FBZ8 (EMBL:AL391041) (349 aa) fasta scores: E(): 7.1e-26, 32.09% id in 324 aa
NP_882223.1	Similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport system permease BraD SW:BRAD_PSEAE (P21627) (307 aa) fasta scores: E(): 1.3e-18, 34.88% id in 301 aa, and to Streptomyces coelicolor  branched amino acid transport system permease SC8A11.11 TR:Q9FBZ9 (EMBL:AL391041) (290 aa) fasta scores: E(): 4.4e-34, 40.78% id in 282 aa
NP_882225.1	N-terminal region is similar to Pseudomonas pseudoalcaligenes phenoxybenzoate dioxygenase alpha subunit PobA SW:POBA_PSEPS (Q52185) (409 aa) fasta scores: E(): 6.4e-32, 36.9% id in 401 aa, and Pseudomonas putida phthalate 4,5-dioxygenase oxygenase subunit Pht3 SW:PHT3_PSEPU (Q05183) (439 aa) fasta scores: E(): 1.5e-24, 31.07% id in 399 aa
NP_882227.1	Similar to Agrobacterium tumefaciens conserved hypothetical protein AGR_L_1509p TR:AAK89332 (EMBL:AE008274) (315 aa) fasta scores: E(): 1.8e-71, 60.81% id in 319 aa, and to Rhizobium loti hypothetical protein MLL5836 TR:Q98AV6 (EMBL:AP003007) (319 aa) fasta scores: E(): 8.1e-71, 63.15% id in 304 aa
NP_882228.1	catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide
NP_882229.1	transposase for IS481 element
NP_882230.1	Weakly similar to Rhizobium meliloti lipopolysaccharide core biosynthesis glycosyl transferase LpsD SW:LPSD_RHIME (Q9R9N0) (343 aa) fasta scores: E(): 0.0003, 23.14% id in 363 aa, and to Rhizobium meliloti glycosyltransferase SMB21242 TR:CAC49146 (EMBL:AL603644) (374 aa) fasta scores: E(): 3.9e-10, 27.92% id in 351 aa
NP_882231.1	Similar to Rhizobium meliloti udp-glucose 6-dehydrogenase RkpK SW:UDG_RHIME (O54068) (437 aa) fasta scores: E(): 1e-76, 48.19% id in 442 aa, and to Burkholderia pseudomallei  UDP-glucose dehydrogenase Udg TR:Q9WWX8 (EMBL:AF159428) (466 aa) fasta scores: E(): 8.3e-108, 63.07% id in 455 aa
NP_882232.1	Similar to Streptomyces coelicolor methylenomycin A resistance protein Mmr SW:MMR_STRCO (P11545) (475 aa) fasta scores: E(): 1e-23, 28.69% id in 453 aa, and to Escherichia coli hypothetical transport protein YebQ SW:YEBQ_ECOLI (P76269) (457 aa) fasta scores: E(): 6.1e-68, 44.69% id in 443 aa
NP_882233.1	Similar to Escherichia coli bifunctional protein [includes: UDP-N-acetylglucosamine pyrophosphorylase; glucosamine-1-phosphate N-acyltransferase] GlmU SW:GLMU_ECOLI (P17114) (456 aa) fasta scores: E(): 8.5e-84, 54.38% id in 456 aa, and to Pseudomonas aeruginosa glucosamine-1-phosphate acetyltransferase/N-acetylglucosamine-1-phosphate uridyltransferase PA5552 TR:Q9HT22 (EMBL:AE004967) (454 aa) fasta scores: E(): 4.4e-93, 59.34% id in 455 aa
NP_882234.1	Similar to Ralstonia solanacearum hypothetical protein rsc0305 rsc0305 or rs03272 SWALL:Q8Y2N0 (EMBL:AL646058) (294 aa) fasta scores: E(): 4e-07, 39.76% id in 259 aa
NP_882235.1	C-terminus is weakly similar to the C-terminal region of Salmonella typhimurium outer membrane lipoprotein precursor SlyB SW:SLYB_SALTY (Q53549) (155 aa) fasta scores: E(): 0.00012, 40% id in 105 aa, and to the full length Escherichia coli hypothetical protein YcfJ SW:YCFJ_ECOLI (P37796) (179 aa) fasta scores: E(): 1.3e-05, 31.48% id in 162 aa
NP_882236.1	Similar to Ralstonia solanacearum hypothetical protein Rsc3357 or Rs02632 SWALL:Q8XU37 (EMBL:AL646074) (75 aa) fasta scores: E(): 6.7e-14, 61.19% id in 67 aa
NP_882237.1	Similar to Caulobacter crescentus SCO1/2 family protein CC3503 TR:Q9A2Q3 (EMBL:AE006008) (190 aa) fasta scores: E(): 3.9e-28, 50% id in 170 aa, and to Rhizobium meliloti  cytochrome c oxidase assembly factor transmembrane protein TR:CAC46733 (EMBL:AL591789) (199 aa) fasta scores: E(): 3e-20, 38.37% id in 172 aa
NP_882238.1	converts protoheme IX and farnesyl diphosphate to heme O
NP_882239.1	Similar to Pseudomonas aeruginosa hypothetical protein PA0112 TR:Q9I720 (EMBL:AE004449) (357 aa) fasta scores: E(): 5.1e-44, 44% id in 325 aa, and to Xylella fastidiosa hypothetical protein XF1359 TR:Q9PDM0 (EMBL:AE003967) (387 aa) fasta scores: E(): 2.6e-27, 33.77% id in 382 aa
NP_882240.1	Similar to Pseudomonas stutzeri hypothetical protein SW:YAPT_PSEST (P47206) (193 aa) fasta scores: E(): 0.061, 28.57% id in 182 aa, and to Pseudomonas aeruginosa hypothetical protein PA0111 TR:Q9I721 (EMBL:AE004449) (192 aa) fasta scores: E(): 3.2e-05, 27.88% id in 208 aa
NP_882241.1	Similar to the C-terminal regions of Streptomyces coelicolor  membrane protein SCI8.14 TR:Q9RJ39 (EMBL:AL132644) (290 aa) fasta scores: E(): 2.5e-06, 30.31% id in 254 aa, and Schizosaccharomyces pombe surf-family protein SPBC1215.01 TR:Q9Y810 (EMBL:AL096846) (290 aa) fasta scores: E(): 1.6e-05, 24.38% id in 242 aa. Possible alternative translational start sites
NP_882242.1	Poor database matches. Similar to Pseudomonas aeruginosa hypothetical protein PA0109 TR:Q9I723 (EMBL:AE004449) (69 aa) fasta scores: E(): 0.0016, 35.48% id in 62 aa
NP_882243.1	Similar to Pseudomonas aeruginosa cytochrome c oxidase, subunit III PA0108 TR:Q9I724 (EMBL:AE004449) (295 aa) fasta scores: E(): 1.4e-52, 50.34% id in 288 aa, and to Dinornis giganteus cytochrome c oxidase subunit III TR:Q9B6W4 (EMBL:AY016013) (261 aa) fasta scores: E(): 1.4e-27, 40.42% id in 282 aa
NP_882245.1	Poor database matches. Similar to Rhizobium meliloti hypothetical transmembrane protein SMC00130 TR:CAC45479 (EMBL:AL591785) (46 aa) fasta scores: E(): 7.9, 44.82% id in 29 aa, and to Paracoccus denitrificans cox locus hypothetical protein 2 SW:YCO2_PARDE (P08302) (89 aa) fasta scores: E(): 8.7, 46.42% id in 28 aa
NP_882246.1	Similar to Bradyrhizobium japonicum cytochrome c oxidase polypeptide I CtaD SW:COX1_BRAJA (P31833) (541 aa) fasta scores: E(): 2.9e-117, 55.69% id in 544 aa, and to Pseudomonas aeruginosa cytochrome c oxidase, subunit I PA0106 TR:Q9I726 (EMBL:AE004449) (530 aa) fasta scores: E(): 3.8e-148, 68.65% id in 536 aa
NP_882247.1	N-terminal region is similar to Paracoccus denitrificans cytochrome c oxidase polypeptide II precursor CtaC SW:COX2_PARDE (P08306) (298 aa) fasta scores: E(): 7.9e-29, 35.08% id in 285 aa. Similar to Pseudomonas aeruginosa cytochrome c oxidase, subunit II PA0105 TR:Q9I727 (EMBL:AE004449) (374 aa) fasta scores: E(): 6.2e-73, 53.16% id in 348 aa. C-terminal region contains cytochrome c domain
NP_882248.1	Similar to the N-terminal region of Schizosaccharomyces pombe thiamine pyrophosphokinase TNR3 SW:TNR3_SCHPO (P41888) (569 aa) fasta scores: E(): 2.8e-05, 23.9% id in 251 aa, and to the full length Neisseria meningitidis hypothetical protein NMA0394 TR:Q9JWF6 (EMBL:AL162753) (291 aa) fasta scores: E(): 7.8e-16, 32.63% id in 239 aa
NP_882249.1	N-terminus is similar to the N-terminal region of Oncorhynchus mykiss sodium-hydrogen exchange protein-beta SW:NAHB_ONCMY (Q01345) (759 aa) fasta scores: E(): 2.6e-22, 25.95% id in 447 aa, and to the full length Synechocystis sp. eukaryotic Na+/H+ exchanger SLR1727 TR:P73863 (EMBL:D90910) (527 aa) fasta scores: E(): 9e-32, 29.15% id in 511 aa. C-terminal region conatains a cyclic nucleotide-binding domain
NP_882250.1	Similar to Pseudomonas aeruginosa hypothetical protein PA4969 TR:Q9HUJ6 (EMBL:AE004910) (272 aa) fasta scores: E(): 2.8e-42, 48.82% id in 256 aa, and to Anabaena sp. 3',5'-cyclic-nucleotide phosphodiesterase ALR5338 TR:BAB77037 (EMBL:AP003599) (266 aa) fasta scores: E(): 4.2e-30, 37.75% id in 249 aa
NP_882251.1	binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters
NP_882252.1	Poor database matches. Similar to Pseudomonas aeruginosa hypothetical protein PA1825 TR:Q9I2S0 (EMBL:AE004609) (214 aa) fasta scores: E(): 1.1e-07, 28.64% id in 199 aa
NP_882253.1	Similar to Homo sapiens esterase D ESD SW:ESTD_HUMAN (P10768) (282 aa) fasta scores: E(): 4.5e-60, 51.77% id in 282 aa, and to Pseudomonas aeruginosa probable esterase PA3628 TR:Q9HY02 (EMBL:AE004783) (283 aa) fasta scores: E(): 1.9e-60, 55.79% id in 276 aa
NP_882254.1	Similar to Rhodobacter sphaeroides alcohol dehydrogenase class III AdhI SW:ADHI_RHOSH (P72324) (376 aa) fasta scores: E(): 3.6e-113, 75.79% id in 376 aa, and to Anabaena azollae glutathione dependent formaldehyde dehydrogenase GDFALDH TR:O24687 (EMBL:U89767) (369 aa) fasta scores: E(): 5.2e-112, 75.33% id in 369 aa
NP_882255.1	Similar to Ralstonia solanacearum hypothetical protein Rsc2966 or Rs01331 SWALL:Q8XV65 (EMBL:AL646072) (241 aa) fasta scores: E(): 1.6e-25, 40.16% id in 249 aa, and to Rhizobium loti hypothetical protein MLL6832 TR:Q988A1 (EMBL:AP003010) (220 aa) fasta scores: E(): 7.7e-07, 30.3% id in 231 aa, and to Caulobacter crescentus hypothetical protein CC1445 TR:Q9A8A9 (EMBL:AE005819) (221 aa) fasta scores: E(): 0.00026, 25.53% id in 235 aa
NP_882256.1	Similar to Escherichia coli glutamate synthase [NADPH] large chain precursor GltB SW:GLTB_ECOLI (P09831) (1517 aa) fasta scores: E(): 8.3e-106, 44.45% id in 1597 aa, and to Deinococcus radiodurans glutamate synthase, large subunit DR0183 TR:Q9RXX2 (EMBL:AE001880) (1615 aa) fasta scores: E(): 0, 70.42% id in 1579 aa
NP_882257.2	glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate
NP_882258.1	Similar to Vibrio cholerae outer membrane protein OmpW SW:OMPW_VIBCH (P17266) (217 aa) fasta scores: E(): 2.3e-18, 44.6% id in 213 aa, and to Escherichia coli outer membrane protein OmpW SW:OMPW_ECOLI (P21364) (212 aa) fasta scores: E(): 6.9e-32, 46.6% id in 206 aa
NP_882259.1	Similar to Rhizobium meliloti hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.5e-48, 42.18% id in 320 aa, and to Pseudomonas chlororaphis hypothetical protein TR:Q9L3W5 (EMBL:AJ271325) (336 aa) fasta scores: E(): 3.1e-45, 42.94% id in 312 aa
NP_882260.1	Similar to Vibrio cholerae ABC transporter ATP-binding protein VC2520 TR:Q9KP56 (EMBL:AE004321) (267 aa) fasta scores: E(): 4.6e-41, 51.16% id in 258 aa, and to Neisseria meningitidis ABC transporter ATP-binding protein NMB1966 TR:Q9JXN0 (EMBL:AE002544) (266 aa) fasta scores: E(): 2.4e-40, 51.4% id in 249 aa
NP_882261.1	Similar to Pseudomonas putida toluene tolerance protein Ttg2B TR:Q9Z401 (EMBL:AF106002) (265 aa) fasta scores: E(): 6.1e-45, 57.02% id in 242 aa, and to Pasteurella multocida hypothetical protein PM0175 TR:Q9CP79 (EMBL:AE006052) (261 aa) fasta scores: E(): 2.6e-48, 60.9% id in 243 aa
NP_882262.1	Similar to Pseudomonas putida toluene tolerance protein Ttg2C TR:Q9Z400 (EMBL:AF106002) (161 aa) fasta scores: E(): 4.7e-22, 46.54% id in 159 aa, and to Neisseria meningitidis  outer membrane transport protein NMA0487 TR:Q9JR43 (EMBL:AL162753) (164 aa) fasta scores: E(): 3.3e-28, 53.04% id in 164 aa
NP_882263.1	Similar to Shigella flexneri lipoprotein required for intercellular spreading, VacJ SW:VACJ_SHIFL (P43262) (251 aa) fasta scores: E(): 2e-22, 35.77% id in 246 aa, and to Pseudomonas aeruginosa hypothetical protein PA2800 TR:Q9I043 (EMBL:AE004707) (234 aa) fasta scores: E(): 1.7e-27, 40.26% id in 231 aa
NP_882264.1	Similar to Neisseria meningitidis  periplasmic transport protein NMA0488 TR:Q9JW92 (EMBL:AL162753) (196 aa) fasta scores: E(): 4.3e-16, 33.82% id in 204 aa, and to Escherichia coli hypothetical protein YrbC SW:YRBC_ECOLI (P45390) (211 aa) fasta scores: E(): 1.8e-12, 29.41% id in 204 aa
NP_882265.1	Similar to Neisseria meningitidis capsule polysaccharide export inner-membrane protein CtrC SW:CTRC_NEIMB (P32015) (265 aa) fasta scores: E(): 7e-06, 27.23% id in 257 aa, and to Caulobacter crescentus ABC-2 type transporter CC2244 TR:Q9A651 (EMBL:AE005895) (273 aa) fasta scores: E(): 9.4e-38, 47.81% id in 274 aa
NP_882266.1	Similar to Escherichia coli  general stress response and morphology regulator BolA SW:BOLA_ECOLI (P15298) (105 aa) fasta scores: E(): 0.00069, 38.46% id in 52 aa, and to Neisseria meningitidis hypothetical protein NMA0256 TR:Q9JWS9 (EMBL:AL162752) (82 aa) fasta scores: E(): 3.3e-10, 52.63% id in 76 aa
NP_882267.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
NP_882268.1	short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ
NP_882269.1	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer
NP_882270.1	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis
NP_882271.1	catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis
NP_882272.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
NP_882273.1	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide
NP_882274.1	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase
NP_882275.1	PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers
NP_882276.1	catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis
NP_882277.1	Similar to Homo sapiens protein kinase C interacting protein 1, PKCI-1 SW:HINT_HUMAN (P49773) (125 aa) fasta scores: E(): 3.1e-16, 44.86% id in 107 aa, and to Neisseria gonorrhoeae histidine triad containing protein HitA SW:HITA_NEIGO (O07817) (107 aa) fasta scores: E(): 6.5e-18, 52.29% id in 109 aa
NP_882278.1	TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes
NP_882279.1	Similar to the N-terminal regions of Escherichia coli Sec-independent protein translocase tatb tatb or mtta2 or b3838 or z5359 or ecs4767 SW:TATB_ECOLI (O69415) (171 aa) fasta scores: E(): 0.0003, 27.97% id in 143 aa, and Neisseria meningitidis Sec-independent protein translocase TatB homologue NMB0600 SW:TATB_NEIMB (Q9K0J6) (228 aa) fasta scores: E(): 1.6e-09, 39.43% id in 142 aa
NP_882280.1	Similar to Escherichia coli Sec-independent protein translocase TatC SW:TATC_ECOLI (P27857) (258 aa) fasta scores: E(): 5.5e-47, 49.39% id in 249 aa, and to Neisseria meningitidis hypothetical protein NMB0599 TR:Q9K0J7 (EMBL:AE002415) (256 aa) fasta scores: E(): 2.6e-49, 54.25% id in 247 aa
NP_882281.1	Similar to Comamonas testosteroni hypothetical protein OrfJ TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 4.3e-43, 41.71% id in 326 aa, and to Agrobacterium tumefaciens hypothetical protein AGR_L_312p TR:AAK88723 (EMBL:AE008213) (329 aa) fasta scores: E(): 1.5e-38, 39.81% id in 319 aa
NP_882282.1	Previously sequenced as Bordetella pertussis pertussis toxin subunit 1 precursor, NAD-dependent ADP-ribosyltransferase, PtxA SW:TOX1_BORPE (P04977) (269 aa) fasta scores: E(): 1.5e-110, 100% id in 269 aa
NP_882283.1	Previously sequenced as Bordetella pertussis pertussis toxin subunit 2 precursor PtxB SW:TOX2_BORPE (P04978) (226 aa) fasta scores: E(): 5.2e-95, 99.55% id in 226 aa. Similar to Bordetella pertussis pertussis toxin subunit 3 precursor PtxC SW:TOX3_BORPE (P04979) (227 aa) fasta scores: E(): 1.7e-64, 68.61% id in 223 aa. Similar to BP3787, 67.544% identity (67.544% ungapped) in 228 aa overlap
NP_882284.1	Previously sequenced as Bordetella pertussis pertussis toxin subunit 4 precursor PtxD SW:TOX4_BORPE (P04980) (152 aa) fasta scores: E(): 9.8e-60, 100% id in 152 aa
NP_882285.1	Previously sequenced as Bordetella pertussis pertussis toxin subunit 5 precursor PtxE SW:TOX5_BORPE (P04981) (133 aa) fasta scores: E(): 2.7e-50, 100% id in 120 aa
NP_882286.1	Previously sequenced as Bordetella pertussis pertussis toxin subunit 3 precursor PtxC SW:TOX3_BORPE (P04979) (227 aa) fasta scores: E(): 4.4e-92, 100% id in 227 aa. Similar to Bordetella pertussis pertussis toxin subunit 2 precursor PtxB SW:TOX2_BORPE (P04978) (226 aa) fasta scores: E(): 3.2e-62, 68.16% id in 223 aa. Similar to BP3784, 67.544% identity (67.544% ungapped) in 228 aa overlap
NP_882287.1	Previously sequenced as Bordetella pertussis pertussis toxin transport protein PtlA TR:Q45390 (EMBL:M14378) (102 aa) fasta scores: E(): 5.8e-38, 100% id in 102 aa. Similar to Brucella suis and Brucella abortus type IV secretion system protein VirB2 TR:Q9RPY3 (EMBL:AF141604) (105 aa) fasta scores: E(): 2e-13, 49.48% id in 97 aa
NP_882288.1	Previously sequenced as Bordetella pertussis pertussis toxin transport protein PtlB TR:Q45391 (EMBL:M14378) (104 aa) fasta scores: E(): 1.4e-43, 100% id in 104 aa. Similar to Brucella suis and Brucella abortus type IV secretion system protein VirB3 TR:Q9RPY2 (EMBL:AF141604) (116 aa) fasta scores: E(): 3.7e-16, 45.36% id in 97 aa
NP_882289.1	Similar to Agrobacterium tumefaciens (plasmid pTiC58)  T-DNA transport apparatus protein VirB4 SW:VIB4_AGRT9 (P05353) (789 aa) fasta scores: E(): 2.9e-40, 32.68% id in 817 aa, and to Brucella abortus type IV secretion system protein VirB4 TR:Q9KIS9 (EMBL:AF226278) (831 aa) fasta scores: E(): 1.2e-176, 52.61% id in 823 aa
NP_882290.1	Poor database matches. C-terminal region is similar to Caulobacter crescentus hypothetical protein CC2420 TR:Q9A5M7 (EMBL:AE005911) (386 aa) fasta scores: E(): 0.019, 26.98% id in 352 aa, and Escherichia coli plasmid pKM101  conjugal transfer protein TR:O50333 (EMBL:X81123) (342 aa) fasta scores: E(): 0.002, 22.22% id in 315 aa
NP_882291.1	Similar to Brucella suis and Brucella abortus  type IV secretion system protein VirB7 TR:Q9RPX8 (EMBL:AF141604) (57 aa) fasta scores: E(): 0.51, 37.2% id in 43 aa
NP_882292.1	Similar to Agrobacterium tumefaciens (plasmid pTiC58)  T-DNA transport apparatus protein Virb8 SW:VIB8_AGRT5 (P17798) (237 aa) fasta scores: E(): 6.4e-11, 31.96% id in 219 aa, and to Brucella suis and Brucella abortus  type IV secretion system protein VirB8 TR:Q9RPX7 (EMBL:AF141604) (239 aa) fasta scores: E(): 8e-38, 40.77% id in 233 aa
NP_882293.1	Similar to Agrobacterium tumefaciens (plasmid pTiC58)  T-DNA transport apparatus protein VirB9 SW:VIB9_AGRT5 (P17799) (293 aa) fasta scores: E(): 0.15, 27.88% id in 269 aa, and to Brucella suis and Brucella abortus  type IV secretion system protein VirB9 TR:Q9RPX6 (EMBL:AF141604) (289 aa) fasta scores: E(): 7.4e-34, 43.66% id in 284 aa
NP_882294.1	Similar to Agrobacterium tumefaciens (plasmids pTi15955 and pTiA6)  T-DNA transport apparatus protein VirB10 SW:VIBX_AGRT5 (P17800) (377 aa) fasta scores: E(): 7.1e-18, 38.01% id in 313 aa, and to Brucella abortus type IV secretion system protein VirB10 TR:Q9KIS6 (EMBL:AF226278) (388 aa) fasta scores: E(): 5e-22, 36.36% id in 363 aa
NP_882295.1	Similar to Agrobacterium tumefaciens (plasmids pTi15955 and pTiA6) T-DNA transport apparatus protein VirB11 SW:VIBY_AGRT9 (P05360) (343 aa) fasta scores: E(): 1.4e-25, 35.91% id in 323 aa, and to Brucella abortus type IV secretion system protein VirB11 TR:Q9KIS5 (EMBL:AF226278) (362 aa) fasta scores: E(): 1e-48, 47.91% id in 336 aa
NP_882296.1	Similar to Escherichia coli probable amino acid metabolite efflux pump EamA SW:EAMA_ECOLI (P31125) (299 aa) fasta scores: E(): 2.9e-09, 27.39% id in 303 aa, and to Pseudomonas aeruginosa hypothetical protein PA3897 TR:Q9HXB6 (EMBL:AE004807) (300 aa) fasta scores: E(): 9.8e-78, 73.44% id in 290 aa
NP_882297.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator PA3898 TR:Q9HXB5 (EMBL:AE004807) (293 aa) fasta scores: E(): 1.4e-56, 53.1% id in 290 aa, and to Pantoea citrea regulatory protein GdhBR TR:Q9Z676 (EMBL:AF102513) (288 aa) fasta scores: E(): 2.5e-29, 36.95% id in 276 aa
NP_882298.1	Similar to Rhizobium meliloti hypothetical protein SMC03833 TR:CAC47795 (EMBL:AL591793) (125 aa) fasta scores: E(): 8.8e-09, 40.18% id in 107 aa, and to Rhizobium loti hypothetical protein MLR4351 TR:Q98E91 (EMBL:AP003003) (120 aa) fasta scores: E(): 1.6e-07, 39.78% id in 93 aa
NP_882299.1	Similar to Pseudomonas aeruginosa hypothetical protein PA0345 TR:Q9I6E8 (EMBL:AE004472) (461 aa) fasta scores: E(): 1.1e-68, 49.78% id in 460 aa, and to Neisseria meningitidis  integral membrane protein NMA1899 TR:Q9JTB3 (EMBL:AL162757) (449 aa) fasta scores: E(): 9.2e-20, 31.6% id in 443 aa
NP_882300.1	Similar to Pseudomonas aeruginosa hypothetical protein PA0344 TR:Q9I6E9 (EMBL:AE004472) (459 aa) fasta scores: E(): 6.6e-91, 58.07% id in 458 aa, and to Neisseria meningitidis hypothetical protein NMB1644 TR:Q9JYD1 (EMBL:AE002515) (446 aa) fasta scores: E(): 5.1e-40, 39.78% id in 465 aa
NP_882301.1	Similar to Rhodobacter sphaeroides f. sp. denitrificans dipeptide transport protein DppA TR:Q9F1X4 (EMBL:AB036425) (533 aa) fasta scores: E(): 7.6e-14, 28.18% id in 550 aa, and to Rhizobium meliloti peptide-binding periplasmic ABC transporter protein SMC02417 TR:CAC47172 (EMBL:AL591791) (520 aa) fasta scores: E(): 1.3e-53, 37.81% id in 521 aa
NP_882302.1	Similar to Bacillus subtilis oligopeptide transport system permease AppB SW:APPB_BACSU (P42062) (317 aa) fasta scores: E(): 3.4e-37, 38% id in 321 aa, and to Agrobacterium tumefaciens AGR_L_368p TR:AAK88754 (EMBL:AE008216) (332 aa) fasta scores: E(): 6.1e-73, 59.69% id in 325 aa. Similar to BP3236, 70.533% identity (70.533% ungapped) in 319 aa overlap
NP_882303.1	Similar to Escherichia coli dipeptide transport system permease DppC SW:DPPC_ECOLI (P37315) (300 aa) fasta scores: E(): 6.7e-20, 39.79% id in 294 aa, and to Agrobacterium tumefaciens AGR_L_366p TR:AAK88753 (EMBL:AE008216) (315 aa) fasta scores: E(): 1.3e-63, 56% id in 300 aa
NP_882304.1	transposase for IS481 element
NP_882305.1	bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate
NP_882306.1	Similar to Neisseria meningitidis hypothetical protein NMA1415 TR:Q9JUA7 (EMBL:AL162755) (287 aa) fasta scores: E(): 6.7e-54, 56.38% id in 282 aa, and to Pseudomonas aeruginosa hypothetical protein PA2823 TR:Q9I020 (EMBL:AE004709) (296 aa) fasta scores: E(): 1.3e-48, 50% id in 288 aa
NP_882307.1	N-terminus is similar to Proteus vulgaris mutator protein MutT SW:MUTT_PROVU (P32090) (112 aa) fasta scores: E(): 6.6e-08, 43.15% id in 95 aa, and to Xylella fastidiosa bifunctional dGTP-pyrophosphohydrolase/thiamine phosphate synthase XF1120 TR:Q9PEA8 (EMBL:AE003948) (320 aa) fasta scores: E(): 3.5e-29, 38.75% id in 320 aa
NP_882308.1	transposase for IS1002 element
NP_882309.1	transposase for IS481 element
NP_882310.1	Similar to Pseudomonas aeruginosa outer membrane protein precursor OprM SW:OPRM_PSEAE (Q51487) (485 aa) fasta scores: E(): 2.1e-35, 32.58% id in 488 aa, and to Pseudomonas aeruginosa probable outer membrane lipoprotein precursor PA2525 TR:Q9I0V8 (EMBL:AE004680) (498 aa) fasta scores: E(): 2e-79, 57.41% id in 479 aa
NP_882311.1	Similar to Escherichia coli hypothetical protein YegO SW:YEGO_ECOLI (P76399) (1025 aa) fasta scores: E(): 0, 60.8% id in 1023 aa, and to Pseudomonas aeruginosa probable RND efflux transporter PA2526 TR:Q9I0V7 (EMBL:AE004680) (1036 aa) fasta scores: E(): 0, 61.08% id in 1033 aa. Similar to BP3814, 50.193% identity (51.590% ungapped) in 1034 aa overlap
NP_882312.1	Similar to Pseudomonas aeruginosa probable RND efflux transporter PA1436 TR:Q9I3R1 (EMBL:AE004573) (1036 aa) fasta scores: E(): 1.2e-171, 50.49% id in 1016 aa, and to Rhizobium loti RND efflux transporter MLL5779 TR:Q98B06 (EMBL:AP003007) (1038 aa) fasta scores: E(): 2.3e-168, 52.25% id in 1020 aa. Similar to BP3813, 50.193% identity (51.590% ungapped) in 1034 aa overlap
NP_882313.1	Similar to Pseudomonas aeruginosa probable RND efflux membrane fusion protein precursor PA2528 TR:Q9I0V5 (EMBL:AE004680) (426 aa) fasta scores: E(): 1.6e-64, 51.74% id in 402 aa, and to Burkholderia solanacearum resistance transmembrane protein RSP1197 TR:CAD18348 (EMBL:AL646083) (449 aa) fasta scores: E(): 1.6e-69, 51.71% id in 408 aa
NP_882314.1	Similar to Vibrio cholerae hypothetical protein VC2428 TR:Q9KPE2 (EMBL:AE004312) (246 aa) fasta scores: E(): 1.1e-22, 31.3% id in 246 aa, and to Escherichia coli hypothetical protein YacF SW:YACF_ECOLI (P36680) (247 aa) fasta scores: E(): 1.7e-20, 31.72% id in 249 aa
NP_882315.1	catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis
NP_882316.1	Similar to Pseudomonas aeruginosa type 4 prepilin-like proteins leader peptide processing enzyme [includes: prepilin peptidase; and N-methyltransferase] PilD SW:LEP4_PSEAE (P22610) (290 aa) fasta scores: E(): 1.3e-38, 46.57% id in 277 aa, and to Burkholderia pseudomallei type 4 prepilin-like proteins leader peptide processing enzyme GspO SW:LEP4_BURPS (Q9ZF70) (275 aa) fasta scores: E(): 2.5e-42, 50.36% id in 272 aa
NP_882317.1	Poor database matches. Weakly similar to Vibrio cholerae lipoprotein VC1962 TR:Q9KQN6 (EMBL:AE004271) (163 aa) fasta scores: E(): 0.065, 28.36% id in 141 aa
NP_882318.1	Similar to the C-terminal regions of Salmonella typhimurium transcriptional regulatory protein UhpA SW:UHPA_SALTY (P27667) (196 aa) fasta scores: E(): 2.6e-05, 47.29% id in 74 aa, and Escherichia coli transcriptional regulatory protein UhpA SW:UHPA_ECOLI (P10940) (196 aa) fasta scores: E(): 6.3e-05, 45.94% id in 74 aa
NP_882319.1	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine
NP_882320.1	Similar to Neisseria meningitidis hypothetical protein NMB1504 TR:Q9JYN0 (EMBL:AE002500) (284 aa) fasta scores: E(): 5.5e-48, 54.41% id in 272 aa, and to Xylella fastidiosa hypothetical protein XF2451 TR:Q9PAP4 (EMBL:AE004054) (338 aa) fasta scores: E(): 1.1e-45, 50.53% id in 283 aa. Possible alternative translational start site
NP_882321.1	Similar to Burkholderia solanacearum conserved hypothetical protein RSC2385 TR:CAD16092 (EMBL:AL646069) (62 aa) fasta scores: E(): 3.7e-09, 58.33% id in 60 aa, and to Neisseria meningitidis hypothetical protein NMA1654 TR:Q9JTS3 (EMBL:AL162756) (61 aa) fasta scores: E(): 6e-06, 44.06% id in 59 aa
NP_882322.1	Similar to Escherichia coli multidrug resistance protein B EmrB SW:EMRB_ECOLI (P27304) (512 aa) fasta scores: E(): 1.5e-26, 28.46% id in 411 aa, and to Rhizobium loti probable transporter MLL1728 TR:Q98JY3 (EMBL:AP002998) (477 aa) fasta scores: E(): 1.7e-75, 46.96% id in 477 aa. Possible alternative translational start site
NP_882323.1	Converts glycerol and ADP to glycerol-3-phosphate and ADP
NP_882324.1	Similar to Pseudomonas aeruginosa hypothetical protein PA0661 TR:Q9I5R0 (EMBL:AE004501) (140 aa) fasta scores: E(): 1.7e-05, 31.46% id in 143 aa, and to Rhizobium loti hypothetical protein MLL4486 TR:Q98DY7 (EMBL:AP003004) (162 aa) fasta scores: E(): 2.2e-05, 31.91% id in 141 aa. Possible alternative translational start site
NP_882325.1	Similar to Rhizobium meliloti hypothetical protein SMA1927 TR:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.7e-48, 44.61% id in 334 aa, and to Agrobacterium tumefaciens AGR_L_312p TR:AAK88723 (EMBL:AE008213) (329 aa) fasta scores: E(): 2.2e-45, 43.28% id in 335 aa
NP_882326.1	Similar to Rhizobium leguminosarum general L-amino acid transport ATP-binding protein AapP SW:AAPP_RHILV (Q52815) (257 aa) fasta scores: E(): 1.7e-67, 77.95% id in 245 aa, and to Pseudomonas marginalis pv. alfalfae hypothetical protein TR:O68330 (EMBL:AF033673) (254 aa) fasta scores: E(): 2.9e-69, 80.32% id in 244 aa. . Similar to several B. pertussis CDSs: BP1181, BP0054, BP1534, BP1855, BP1575, BP1362, P0768, and BP1510.
NP_882327.1	Similar to Rhizobium leguminosarum general L-amino acid transport system permease AapM SW:AAPM_RHILV (Q52814) (384 aa) fasta scores: E(): 1.8e-59, 49.32% id in 369 aa, and to Pseudomonas marginalis pv. alfalfae hypothetical protein TR:O68329 (EMBL:AF033673) (365 aa) fasta scores: E(): 1.7e-71, 53.26% id in 368 aa
NP_882328.1	Similar to Rhizobium leguminosarum general L-amino acid transport system permease AapQ SW:AAPQ_RHILV (Q52813) (400 aa) fasta scores: E(): 5.1e-67, 50.52% id in 378 aa, and to Vibrio cholerae amino acid ABC transporter permease VC1361 TR:Q9KS98 (EMBL:AE004215) (401 aa) fasta scores: E(): 9.4e-70, 49.75% id in 402 aa
NP_882329.1	Similar to Rhizobium leguminosarum general L-amino acid-binding periplasmic protein precursor AapJ SW:AAPJ_RHILV (Q52812) (341 aa) fasta scores: E(): 1.1e-74, 55.75% id in 339 aa, and to Vibrio cholerae amino acid ABC transporter periplasmic amino acid-binding protein VC1362 TR:Q9KS97 (EMBL:AE004216) (342 aa) fasta scores: E(): 4.7e-79, 58.63% id in 336 aa. Similar to BP1529, 67.059% identity (67.456% ungapped) in 340 aa overlap, and to BP0558, 66.471% identity (67.262% ungapped) in 340 aa overlap
NP_882330.1	Similar to Escherichia coli cell division ATP-binding protein FtsE SW:FTSE_ECOLI (P10115) (222 aa) fasta scores: E(): 9e-36, 50.9% id in 220 aa, and to Neisseria meningitidis ABC transporter ATP-binding protein NMA0254 TR:Q9JWT1 (EMBL:AL162752) (216 aa) fasta scores: E(): 1.6e-34, 48.83% id in 215 aa
NP_882331.1	Similar to Neisseria gonorrhoeae  cell division protein FtsX SW:FTSX_NEIGO (P95357) (305 aa) fasta scores: E(): 1e-20, 32.31% id in 294 aa, and to the C-terminal region of Escherichia coli cell division protein FtsX SW:FTSX_ECOLI (P10122) (352 aa) fasta scores: E(): 9.4e-18, 30.53% id in 298 aa
NP_882332.1	catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors
NP_882333.1	Similar to Escherichia coli A/G-specific adenine glycosylase MutY SW:MUTY_ECOLI (P17802) (350 aa) fasta scores: E(): 4.8e-56, 42.04% id in 352 aa, and to Pseudomonas aeruginosa A/G specific adenine glycosylase PA5147 TR:Q9HU37 (EMBL:AE004927) (355 aa) fasta scores: E(): 6.3e-63, 49.56% id in 347 aa
NP_882334.1	Similar to Rhizobium loti hypothetical protein MLL1636 TR:Q98K51 (EMBL:AP002997) (290 aa) fasta scores: E(): 5.6e-33, 36.12% id in 263 aa, and to Streptomyces coelicolor  DNA-binding protein 2SCK31.04c TR:Q9ADL0 (EMBL:AL451182) (291 aa) fasta scores: E(): 4.5e-31, 42.58% id in 263 aa. Possible alternative translational start site
NP_882335.1	Similar to Erwinia herbicola biotin synthesis protein BioC SW:BIOC_ERWHE (O06898) (251 aa) fasta scores: E(): 9.1e-07, 31.4% id in 207 aa. C-terminal region is similar to Pseudomonas aeruginosa hypothetical protein PA3119 TR:O87011 (EMBL:U93274) (187 aa) fasta scores: E(): 1.1e-39, 62.08% id in 182 aa
NP_882336.1	transposase for IS481 element
NP_882337.1	Similar to Escherichia coli hypothetical protein YfdE SW:YFDE_ECOLI (P76518) (381 aa) fasta scores: E(): 1.5e-39, 32.62% id in 377 aa, and to Drosophila melanogaster hypothetical protein CG10877 TR:Q9VDL4 (EMBL:AE003731) (441 aa) fasta scores: E(): 5.1e-44, 36.53% id in 375 aa
NP_882338.1	Similar to Salmonella typhimurium 2-methylcitrate dehydratase PrpD SW:PRPD_SALTY (P74840) (483 aa) fasta scores: E(): 1.3e-07, 24.77% id in 436 aa, and to Agrobacterium tumefaciens AGR_L_2924p TR:AAK90029 (EMBL:AE008346) (448 aa) fasta scores: E(): 4e-23, 27.89% id in 441 aa
NP_882339.1	Similar to Comamonas testosteroni hypothetical protein Orf4 TR:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 1.6e-32, 35.87% id in 315 aa, and to Pseudomonas putida hypothetical protein SW:YCLC_PSEPU (Q47100) (329 aa) fasta scores: E(): 1.5e-28, 34.7% id in 317 aa
NP_882340.1	Similar to Archaeoglobus fulgidus enoyl-CoA hydratase AF0963 TR:O29299 (EMBL:AE001038) (259 aa) fasta scores: E(): 1.4e-25, 36.51% id in 241 aa, and to Bacillus subtilis  hydroxybutyryl-dehydratase FenO TR:Q9L7W1 (EMBL:AF218939) (260 aa) fasta scores: E(): 1.6e-25, 35.84% id in 265 aa
NP_882341.1	Similar to Burkholderia solanacearum probable oxidoreductase RSC1608 TR:CAD15310 (EMBL:AL646065) (235 aa) fasta scores: E(): 1.5e-35, 44.73% id in 228 aa, and to Rhizobium loti nitroreductase MLL1278 TR:Q98KX3 (EMBL:AP002997) (234 aa) fasta scores: E(): 9.1e-33, 44.14% id in 222 aa
NP_882342.1	Similar to Mycobacterium tuberculosis CDC1551 TetR family transcriptional regulator MT2581 TR:AAK46885 (EMBL:AE007094) (231 aa) fasta scores: E(): 1.1e-05, 28.77% id in 212 aa, and to Pseudomonas fluorescens transcriptional regulator Pfi2 TR:Q9RFR4 (EMBL:AF173683) (207 aa) fasta scores: E(): 3.7e-10, 27.58% id in 203 aa
NP_882343.1	Similar to Homo sapiens mitochondrial hydroxymethylglutaryl-CoA lyase precursor HMGCL SW:HMGL_HUMAN (P35914) (325 aa) fasta scores: E(): 4.7e-18, 35.94% id in 306 aa, and to Pseudomonas mevalonii hydroxymethylglutaryl-CoA lyase MvaB SW:HMGL_PSEMV (P13703) (301 aa) fasta scores: E(): 7.2e-17, 36.03% id in 308 aa
NP_882344.1	Similar to Mus musculus AU-binding enoyl-CoA hydratase AUH TR:Q9JLZ3 (EMBL:AF118386) (314 aa) fasta scores: E(): 4.3e-15, 30.15% id in 262 aa, and to Mycobacterium tuberculosis hypothetical protein MTCY08D5.17 TR:P96404 (EMBL:Z92669) (262 aa) fasta scores: E(): 4.3e-23, 39.6% id in 250 aa
NP_882345.1	Similar to Agrobacterium tumefaciens AGR_C_3858p TR:AAK87874 (EMBL:AE008129) (419 aa) fasta scores: E(): 8.2e-40, 34.09% id in 393 aa, and to Rhizobium meliloti conserved membrane-anchored protein SMB21182 TR:CAC49248 (EMBL:AL603645) (394 aa) fasta scores: E(): 1.5e-37, 33.58% id in 396 aa. Possible alternative translational start site
NP_882346.1	transposase for IS481 element
NP_882347.1	Similar to Vibrio fischeri catalase KatA SW:CATA_VIBFI (O68146) (482 aa) fasta scores: E(): 1.5e-147, 70.58% id in 476 aa. Previously sequenced as Bordetella pertussis catalase KatA SW:CATA_BORPE (P48062) (482 aa) fasta scores: E(): 8.2e-207, 100% id in 482 aa. Possible alternative translational start site at residue 4
NP_882348.1	Similar to Escherichia coli  aliphatic sulfonates transport permease SsuC SW:SSUC_ECOLI (P75851) (263 aa) fasta scores: E(): 2.5e-17, 29.48% id in 251 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter PA2307 TR:Q9I1G8 (EMBL:AE004657) (288 aa) fasta scores: E(): 1.1e-78, 74.46% id in 282 aa
NP_882349.1	Similar to Klebsiella pneumoniae nitrate transport protein NasD SW:NASD_KLEPN (P39459) (262 aa) fasta scores: E(): 2.4e-27, 42.15% id in 223 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter PA2308 TR:Q9I1G7 (EMBL:AE004657) (282 aa) fasta scores: E(): 4.8e-62, 72.76% id in 257 aa
NP_882350.1	Similar to Escherichia coli taurine-binding periplasmic protein precursor TauA SW:TAUA_ECOLI (Q47537) (320 aa) fasta scores: E(): 7.6, 23.31% id in 296 aa, and to Pseudomonas aeruginosa hypothetical protein PA2309 TR:Q9I1G6 (EMBL:AE004657) (340 aa) fasta scores: E(): 2.5e-86, 67.75% id in 338 aa
NP_882351.1	Similar to Escherichia coli alpha-ketoglutarate-dependent taurine dioxygenase TauD SW:TAUD_ECOLI (P37610) (282 aa) fasta scores: E(): 4.2e-34, 40.2% id in 291 aa, and to Pseudomonas aeruginosa hypothetical protein PA2310 TR:Q9I1G5 (EMBL:AE004657) (295 aa) fasta scores: E(): 1.6e-84, 69.36% id in 297 aa. Possible alternative translational start site
NP_882352.1	Similar to Campylobacter jejuni hippurate hydrolase HipO SW:HIPO_CAMJE (P45493) (383 aa) fasta scores: E(): 9.4e-51, 42.17% id in 396 aa, and to Pseudomonas aeruginosa probable hydrolase PA4344 TR:Q9HW57 (EMBL:AE004850) (406 aa) fasta scores: E(): 2e-72, 52.15% id in 395 aa. Similar to BP2810, 57.179% identity (57.614% ungapped) in 397 aa overlap, and to BP3036, 50.000% identity (51.813% ungapped) in 400 aa overlap
NP_882353.1	Similar to Bacillus subtilis oligopeptide transport ATP-binding protein AppF SW:APPF_BACSU (P42065) (329 aa) fasta scores: E(): 6.9e-50, 51.86% id in 295 aa, and to Agrobacterium tumefaciens AGR_pAT_367p TR:AAK90631 (EMBL:AE007895) (329 aa) fasta scores: E(): 1.5e-64, 59.07% id in 325 aa. Similar to the C-terminal region of BP3297, 60.927% identity (61.130% ungapped) in 302 aa overlap
NP_882354.1	Similar to Salmonella typhimurium oligopeptide transport ATP-binding protein OppD SW:OPPD_SALTY (P04285) (335 aa) fasta scores: E(): 1.8e-49, 47.44% id in 333 aa, and to Agrobacterium tumefaciens AGR_pAT_366p TR:AAK90630 (EMBL:AE007895) (324 aa) fasta scores: E(): 8.3e-63, 59.81% id in 316 aa. Similar to the N-terminal region of BP3297, 63.273% identity (63.273% ungapped) in 275 aa overlap
NP_882355.1	Similar to Escherichia coli dipeptide transport system permease DppC SW:DPPC_ECOLI (P37315) (300 aa) fasta scores: E(): 5.4e-40, 40.33% id in 295 aa, and to Agrobacterium tumefaciens AGR_pAT_365p TR:AAK90629 (EMBL:AE007895) (318 aa) fasta scores: E(): 2.4e-61, 57.24% id in 283 aa. Similar to BP3298, 60.000% identity (60.417% ungapped) in 290 aa overlap
NP_882356.1	Similar to Bacillus subtilis oligopeptide transport system permease AppB SW:APPB_BACSU (P42062) (317 aa) fasta scores: E(): 1.6e-38, 37.18% id in 320 aa, and to Agrobacterium tumefaciens AGR_pAT_363p TR:AAK90628 (EMBL:AE007895) (323 aa) fasta scores: E(): 1.5e-65, 51.58% id in 316 aa. Similar to BP3299, 54.430% identity (54.430% ungapped) in 316 aa overlap
NP_882357.1	Similar to Escherichia coli nickel-binding periplasmic protein precursor NikA SW:NIKA_ECOLI (P33590) (524 aa) fasta scores: E(): 1.2e-24, 26.8% id in 526 aa, and to Rhizobium meliloti  oligopeptidemurein peptide ABC transporter periplasmic solute-binding protein SMB21037 TR:CAC49009 (EMBL:AL603644) (531 aa) fasta scores: E(): 5.8e-55, 37.34% id in 498 aa
NP_882358.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
NP_882359.1	Similar to an internal region of Rattus norvegicus monocarboxylate transporter 4 MCT4 SW:MOT4_RAT (O35910) (471 aa) fasta scores: E(): 0.002, 24.23% id in 425 aa, and to the full length Pseudomonas aeruginosa hypothetical protein PA2589 TR:Q9I0P8 (EMBL:AE004687) (404 aa) fasta scores: E(): 4.2e-07, 26.05% id in 403 aa. Possible alternative translational start site
NP_882360.1	Two-component regulatory system family, response regulator protein. Similar to Salmonella typhimurium transcriptional regulatory protein TctD SW:TCTD_SALTY (P22104) (224 aa) fasta scores: E(): 2.4e-35, 48.18% id in 220 aa, and to Rhizobium loti two-component response regulator MLL7953 TR:Q984L3 (EMBL:AP003013) (223 aa) fasta scores: E(): 2.4e-34, 47.96% id in 221 aa. Similar to BP3350, 53.302% identity (53.555% ungapped) in 212 aa overlap, and to BP2547, 50.455% identity (50.685% ungapped) in 220 aa overlap
NP_882361.1	Two-component regulatory system family, sensor kinase. Similar to Burkholderia solanacearum transmembrane sensor kinase transcription regulator protein RSC2936 TR:CAD16643 (EMBL:AL646072) (500 aa) fasta scores: E(): 2e-59, 45.27% id in 466 aa, and to Pseudomonas aeruginosa probable two-component sensor PA0757 TR:Q9I5H2 (EMBL:AE004510) (460 aa) fasta scores: E(): 2.8e-41, 36.2% id in 453 aa
NP_882362.1	Similar to Salmonella enterica hypothetical protein TctC TR:Q9FA46 (EMBL:AF020810) (325 aa) fasta scores: E(): 3.2e-76, 63.93% id in 305 aa, and to Pseudomonas aeruginosa hypothetical protein PA0754 TR:Q9I5H5 (EMBL:AE004510) (327 aa) fasta scores: E(): 2e-73, 58.84% id in 328 aa
NP_882363.1	Similar to Salmonella enterica hypothetical protein TctB TR:Q9FA45 (EMBL:AF020810) (144 aa) fasta scores: E(): 2.2e-15, 37.14% id in 140 aa, and to Pseudomonas aeruginosa hypothetical protein PA0753 TR:Q9I5H6 (EMBL:AE004510) (156 aa) fasta scores: E(): 7.7e-11, 31.54% id in 149 aa. Possible alternative translational start site
NP_882364.1	Similar to Pseudomonas aeruginosa hypothetical protein PA0752 TR:Q9I5H7 (EMBL:AE004510) (505 aa) fasta scores: E(): 1.9e-113, 62.72% id in 499 aa, and to Salmonella enterica hypothetical protein TctA TR:Q9FA44 (EMBL:AF020810) (504 aa) fasta scores: E(): 6.9e-112, 60.56% id in 497 aa
NP_882365.1	catalyzes the transfer of an amino moiety
NP_882366.1	Similar to Escherichia coli cold shock-like protein CspC SW:CSPC_ECOLI (P36996) (68 aa) fasta scores: E(): 1.1e-14, 62.9% id in 62 aa, and to Salmonella typhimurium cold shock protein CspA SW:CSPA_SALTY (P37410) (69 aa) fasta scores: E(): 1.1e-14, 64.06% id in 64 aa. Similar to BP1770, 60.606% identity (60.606% ungapped) in 66 aa overlap, BP2757, 62.295% identity (62.295% ungapped) in 61 aa overlap, BP1772, 59.677% identity (59.677% ungapped) in 62 aa overlap, and to BP0426, 54.545% identity (54.545% ungapped) in 66 aa overlap