-- dump date 20240506_011019 -- class Genbank::Contig -- table contig_comment -- id comment NC_017082.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to AP012279.1.REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 dataREFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil.REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG)REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank ofREFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ)REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: JapanREFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: ShizuokaREFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: MishimaREFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 YataREFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540.REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/ConsedREFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5xREFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX TitaniumREFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,887REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,887 CDSs (total) :: 6,833REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,887 CDSs (total) :: 6,833 Genes (coding) :: 6,805REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,887 CDSs (total) :: 6,833 Genes (coding) :: 6,805 CDSs (with protein) :: 6,805REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,887 CDSs (total) :: 6,833 Genes (coding) :: 6,805 CDSs (with protein) :: 6,805 Genes (RNA) :: 54REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,887 CDSs (total) :: 6,833 Genes (coding) :: 6,805 CDSs (with protein) :: 6,805 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,887 CDSs (total) :: 6,833 Genes (coding) :: 6,805 CDSs (with protein) :: 6,805 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,887 CDSs (total) :: 6,833 Genes (coding) :: 6,805 CDSs (with protein) :: 6,805 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 47REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,887 CDSs (total) :: 6,833 Genes (coding) :: 6,805 CDSs (with protein) :: 6,805 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,887 CDSs (total) :: 6,833 Genes (coding) :: 6,805 CDSs (with protein) :: 6,805 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 4 Pseudo Genes (total) :: 28REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,887 CDSs (total) :: 6,833 Genes (coding) :: 6,805 CDSs (with protein) :: 6,805 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 4 Pseudo Genes (total) :: 28 CDSs (without protein) :: 28REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,887 CDSs (total) :: 6,833 Genes (coding) :: 6,805 CDSs (with protein) :: 6,805 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 4 Pseudo Genes (total) :: 28 CDSs (without protein) :: 28 Pseudo Genes (ambiguous residues) :: 0 of 28REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,887 CDSs (total) :: 6,833 Genes (coding) :: 6,805 CDSs (with protein) :: 6,805 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 4 Pseudo Genes (total) :: 28 CDSs (without protein) :: 28 Pseudo Genes (ambiguous residues) :: 0 of 28 Pseudo Genes (frameshifted) :: 11 of 28REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,887 CDSs (total) :: 6,833 Genes (coding) :: 6,805 CDSs (with protein) :: 6,805 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 4 Pseudo Genes (total) :: 28 CDSs (without protein) :: 28 Pseudo Genes (ambiguous residues) :: 0 of 28 Pseudo Genes (frameshifted) :: 11 of 28 Pseudo Genes (incomplete) :: 18 of 28REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,887 CDSs (total) :: 6,833 Genes (coding) :: 6,805 CDSs (with protein) :: 6,805 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 4 Pseudo Genes (total) :: 28 CDSs (without protein) :: 28 Pseudo Genes (ambiguous residues) :: 0 of 28 Pseudo Genes (frameshifted) :: 11 of 28 Pseudo Genes (incomplete) :: 18 of 28 Pseudo Genes (internal stop) :: 1 of 28REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,887 CDSs (total) :: 6,833 Genes (coding) :: 6,805 CDSs (with protein) :: 6,805 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 4 Pseudo Genes (total) :: 28 CDSs (without protein) :: 28 Pseudo Genes (ambiguous residues) :: 0 of 28 Pseudo Genes (frameshifted) :: 11 of 28 Pseudo Genes (incomplete) :: 18 of 28 Pseudo Genes (internal stop) :: 1 of 28 Pseudo Genes (multiple problems) :: 2 of 28REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,887 CDSs (total) :: 6,833 Genes (coding) :: 6,805 CDSs (with protein) :: 6,805 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 4 Pseudo Genes (total) :: 28 CDSs (without protein) :: 28 Pseudo Genes (ambiguous residues) :: 0 of 28 Pseudo Genes (frameshifted) :: 11 of 28 Pseudo Genes (incomplete) :: 18 of 28 Pseudo Genes (internal stop) :: 1 of 28 Pseudo Genes (multiple problems) :: 2 of 28 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP012279.1. the hybrid assembly of Sanger and 454 data an oligotrophic bacterium isolated from soil. institute_2: National Institute of Genetics (NIG) department_2: Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) country_2: Japan state_2: Shizuoka city_2: Mishima street_2: 1111 Yata zip_2: 411-8540. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler; Phred/Phrap/Consed Genome Coverage :: 4.5x Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/27/2023 01:31:05 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,887 CDSs (total) :: 6,833 Genes (coding) :: 6,805 CDSs (with protein) :: 6,805 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 4 Pseudo Genes (total) :: 28 CDSs (without protein) :: 28 Pseudo Genes (ambiguous residues) :: 0 of 28 Pseudo Genes (frameshifted) :: 11 of 28 Pseudo Genes (incomplete) :: 18 of 28 Pseudo Genes (internal stop) :: 1 of 28 Pseudo Genes (multiple problems) :: 2 of 28 ##Genome-Annotation-Data-END## COMPLETENESS: full length.