-- dump date   	20140619_011539
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
NP_697044.1	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.
NP_697045.1	binds the polymerase to DNA and acts as a sliding clamp
NP_697046.1	Required for DNA replication; binds preferentially to single-stranded, linear DNA
NP_697047.1	ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase
NP_697048.1	identified by similarity to EGAD:90750; match to protein family HMM PF02826
NP_697049.1	identified by similarity to SP:P33916; match to protein family HMM PF00005
NP_697050.1	identified by similarity to GP:17983985; match to protein family HMM PF00528
NP_697051.1	identified by similarity to SP:P33914; match to protein family HMM PF00528
NP_697052.1	identified by similarity to SP:P33913; match to protein family HMM PF00496
NP_697053.1	identified by match to protein family HMM PF00496
NP_697057.1	identified by similarity to SP:P02917; match to protein family HMM PF01094
NP_697058.1	identified by similarity to OMNI:NTL02ML1891
NP_697059.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_697060.1	identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02785; match to protein family HMM PF02786
NP_697061.1	identified by match to protein family HMM PF01039
NP_697062.1	identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771
NP_697063.1	AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase
NP_697064.1	identified by similarity to OMNI:NTL02ML1269
NP_697065.1	identified by similarity to OMNI:CC1521; match to protein family HMM PF01757
NP_697066.1	identified by similarity to GP:15073181
NP_697067.1	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis
NP_697068.1	Catalyzes the formation of (d)CDP from ATP and (d)CMP
NP_697069.1	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins
NP_697070.1	identified by similarity to GP:15155628; match to protein family HMM PF03601
NP_697071.1	identified by match to protein family HMM PF00126; match to protein family HMM PF03466
NP_697074.1	involved in a recombinational process of DNA repair, independent of the recBC complex
NP_697075.1	identified by similarity to OMNI:NTL02ML4268; match to protein family HMM PF02575; match to protein family HMM TIGR00103
NP_697076.1	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA
NP_697077.1	identified by similarity to OMNI:NTL02ML4266; match to protein family HMM PF01230
NP_697078.1	identified by similarity to OMNI:NTL02ML4265; match to protein family HMM PF00293
NP_697079.1	catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis
NP_697080.1	CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS
NP_697081.1	identified by similarity to EGAD:14195; match to protein family HMM PF00034
NP_697082.1	identified by similarity to GP:14021137; match to protein family HMM PF00994
NP_697084.1	identified by similarity to EGAD:20044; match to protein family HMM TIGR01433
NP_697085.1	identified by similarity to EGAD:14783; match to protein family HMM PF00115
NP_697086.1	identified by similarity to EGAD:13682; match to protein family HMM PF00510
NP_697087.1	identified by similarity to EGAD:20825; match to protein family HMM PF03626
NP_697089.1	identified by similarity to GP:3511221
NP_697090.1	identified by similarity to OMNI:NTL02ML1304; match to protein family HMM PF01103
NP_697091.1	identified by similarity to GP:15076022; match to protein family HMM PF04357; match to protein family HMM TIGR01612
NP_697092.1	identified by similarity to GP:15160041; match to protein family HMM PF03734; match to protein family HMM TIGR01409
NP_697096.1	identified by similarity to GP:15074483; match to protein family HMM PF04314
NP_697098.1	identified by match to protein family HMM PF00903
NP_697099.1	identified by match to protein family HMM PF01883
NP_697100.1	catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate
NP_697102.1	identified by match to protein family HMM PF00126; match to protein family HMM PF03466
NP_697104.1	identified by similarity to GP:11066210
NP_697105.1	identified by match to protein family HMM PF01557
NP_697106.1	identified by similarity to GP:15073555
NP_697108.1	identified by similarity to OMNI:NTL02ML3554
NP_697109.1	identified by match to protein family HMM PF01464
NP_697110.1	identified by similarity to EGAD:38000; match to protein family HMM PF03006
NP_697111.1	DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.
NP_697112.1	identified by similarity to GP:14523587
NP_697113.1	identified by similarity to GP:15076199
NP_697114.1	identified by similarity to SP:P10858; match to protein family HMM PF03895; match to protein family HMM PF05658; match to protein family HMM PF05662
NP_697115.1	identified by similarity to GP:15073388
NP_697116.1	catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming
NP_697118.1	identified by similarity to OMNI:NTL02ML3355; match to protein family HMM PF04055; match to protein family HMM TIGR00048
NP_697121.1	identified by similarity to GP:15076241
NP_697122.1	identified by similarity to GP:15076242
NP_697123.1	4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction
NP_697124.1	identified by match to protein family HMM PF01451
NP_697125.1	identified by similarity to OMNI:NTL02ML3347
NP_697126.1	identified by match to protein family HMM PF00657
NP_697127.1	identified by match to protein family HMM PF00005
NP_697128.1	identified by match to protein family HMM PF02687
NP_697129.1	identified by similarity to GP:15076248; match to protein family HMM PF01027
NP_697130.1	identified by similarity to EGAD:8993; match to protein family HMM PF00583
NP_697131.1	identified by similarity to GP:15076253
NP_697132.1	identified by similarity to GP:15076254
NP_697134.1	Catalyzes the conversion of citrate to isocitrate
NP_697135.1	ATP-binding protein; required for proper cytochrome c maturation
NP_697136.1	identified by match to protein family HMM PF03379; match to protein family HMM TIGR01190
NP_697137.1	identified by similarity to SP:P30962; match to protein family HMM PF01578; match to protein family HMM TIGR01191
NP_697138.1	identified by similarity to EGAD:15659; match to protein family HMM PF04995
NP_697139.1	identified by match to protein family HMM TIGR00385
NP_697140.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
NP_697142.1	identified by similarity to GP:15157523
NP_697143.1	identified by similarity to OMNI:CC3015; match to protein family HMM PF00072
NP_697145.1	identified by similarity to GP:15155891
NP_697147.1	identified by similarity to EGAD:8060
NP_697148.1	identified by similarity to GP:17983880; match to protein family HMM PF01547; match to protein family HMM TIGR00971
NP_697149.1	identified by similarity to SP:Q01895; match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02139
NP_697150.1	identified by similarity to SP:P16702; match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140
NP_697151.1	identified by similarity to SP:P14788; match to protein family HMM PF00005; match to protein family HMM TIGR00968
NP_697152.1	identified by similarity to GP:3551791; match to protein family HMM TIGR01612
NP_697153.1	catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate
NP_697154.1	identified by similarity to EGAD:38480; match to protein family HMM PF02567; match to protein family HMM TIGR00654
NP_697155.1	identified by similarity to GP:15075131
NP_697156.1	identified by similarity to EGAD:15614; match to protein family HMM PF00294
NP_697157.1	identified by match to protein family HMM PF00106
NP_697158.1	identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074
NP_697160.1	identified by similarity to EGAD:151783
NP_697161.1	identified by match to protein family HMM PF01612
NP_697162.1	identified by match to protein family HMM PF01546
NP_697164.1	has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair
NP_697165.1	identified by similarity to SP:P23304; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880
NP_697166.1	negatively supercoils closed circular double-stranded DNA
NP_697168.1	identified by similarity to OMNI:NTL02ML5595; match to protein family HMM PF00756
NP_697169.1	identified by similarity to GP:14021760
NP_697170.1	identified by match to protein family HMM PF00583
NP_697171.1	identified by similarity to EGAD:97446; match to protein family HMM PF02583
NP_697172.1	identified by match to protein family HMM PF00512; match to protein family HMM PF02518
NP_697173.1	identified by similarity to EGAD:46813
NP_697174.1	identified by similarity to PIR:PN0685; match to protein family HMM PF01609
NP_697176.1	identified by match to protein family HMM PF00072; match to protein family HMM TIGR01199
NP_697177.1	identified by similarity to GP:15154914
NP_697178.1	identified by similarity to GP:9392598; match to protein family HMM PF03734
NP_697179.1	identified by match to protein family HMM PF01106
NP_697180.1	identified by similarity to GP:15155260; match to protein family HMM PF00582
NP_697181.2	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_697182.1	identified by similarity to SP:P56882; match to protein family HMM PF03023; match to protein family HMM TIGR01695
NP_697183.1	catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein
NP_697185.1	This protein performs the mismatch recognition step during the DNA repair process
NP_697186.1	identified by similarity to GP:15073322
NP_697187.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
NP_697188.1	identified by match to protein family HMM PF00588
NP_697189.1	identified by similarity to OMNI:NTL02ML2473
NP_697190.1	identified by similarity to GP:15073316
NP_697191.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
NP_697192.1	identified by match to protein family HMM PF01343; match to protein family HMM TIGR00706
NP_697193.1	identified by similarity to GP:15155241
NP_697194.1	identified by similarity to GP:15155240; match to protein family HMM PF03968
NP_697195.1	identified by similarity to GP:17983823; match to protein family HMM PF00005
NP_697196.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen
NP_697198.1	identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741
NP_697199.1	identified by match to protein family HMM PF00359; match to protein family HMM TIGR01419
NP_697200.1	identified by similarity to GP:15073342
NP_697201.1	identified by similarity to OMNI:CC3592; match to protein family HMM PF00011
NP_697203.1	identified by similarity to GP:15158767
NP_697204.1	identified by similarity to EGAD:18451; match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083
NP_697205.1	role in sulfur assimilation
NP_697207.1	identified by match to protein family HMM PF00294
NP_697208.1	identified by similarity to GP:15155036; match to protein family HMM PF03458
NP_697209.1	with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor
NP_697210.1	Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
NP_697211.1	RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs
NP_697212.1	identified by match to protein family HMM PF00903
NP_697213.1	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine
NP_697214.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
NP_697215.1	identified by similarity to OMNI:CC0144; match to protein family HMM PF00590; match to protein family HMM TIGR00096
NP_697216.1	identified by similarity to GP:15073266; match to protein family HMM PF02021
NP_697217.1	identified by similarity to SP:P11098; match to protein family HMM PF00590; match to protein family HMM TIGR01469; match to protein family HMM TIGR01470
NP_697218.1	identified by similarity to GP:15156533
NP_697219.1	identified by similarity to OMNI:CC1119; match to protein family HMM PF01077; match to protein family HMM PF03460
NP_697220.1	catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite
NP_697221.1	identified by similarity to GP:15156535
NP_697222.1	identified by similarity to GP:14021352
NP_697223.1	identified by similarity to OMNI:CC0659; match to protein family HMM PF01035; match to protein family HMM TIGR00589
NP_697224.1	identified by similarity to GP:14025509
NP_697225.1	identified by similarity to GP:15073804
NP_697226.1	one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity
NP_697228.1	identified by match to protein family HMM PF00196; match to protein family HMM PF03472
NP_697229.1	identified by match to protein family HMM PF00202
NP_697231.1	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP
NP_697232.1	in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis
NP_697233.1	identified by similarity to SP:P22255; match to protein family HMM PF00459; match to protein family HMM TIGR01331
NP_697234.1	identified by match to protein family HMM PF00027
NP_697236.1	identified by similarity to SP:P09392; match to protein family HMM PF00455
NP_697237.1	in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane
NP_697238.1	identified by match to protein family HMM PF00171
NP_697239.1	identified by similarity to SP:P42327; match to protein family HMM PF00107
NP_697240.1	identified by similarity to OMNI:NTL02ML5214; match to protein family HMM PF05610
NP_697244.1	identified by similarity to EGAD:17385; match to protein family HMM PF00171
NP_697245.1	identified by match to protein family HMM PF00528
NP_697246.1	identified by similarity to EGAD:24145; match to protein family HMM PF03070
NP_697248.1	Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate
NP_697249.1	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate
NP_697250.1	identified by similarity to SP:O32583; match to protein family HMM PF02597; match to protein family HMM TIGR01683
NP_697251.1	identified by match to protein family HMM PF01266
NP_697252.1	identified by match to protein family HMM TIGR00097
NP_697253.1	identified by match to protein family HMM PF00563; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254
NP_697254.1	identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR00003; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525
NP_697255.1	identified by match to protein family HMM PF00376
NP_697256.1	identified by match to protein family HMM PF00528
NP_697257.1	identified by match to protein family HMM PF00005
NP_697258.1	identified by similarity to SP:P33361; match to protein family HMM PF00528
NP_697259.1	identified by similarity to GP:17983752; match to protein family HMM PF04069
NP_697260.1	identified by similarity to OMNI:NTL02ML0782
NP_697261.1	identified by similarity to EGAD:22862; match to protein family HMM PF00208; match to protein family HMM PF02812
NP_697263.1	identified by similarity to SP:P40875; match to protein family HMM PF01266; match to protein family HMM TIGR01373
NP_697264.1	identified by similarity to EGAD:43131; match to protein family HMM PF04267; match to protein family HMM TIGR01374
NP_697265.1	identified by similarity to EGAD:43132; match to protein family HMM PF01571; match to protein family HMM TIGR01372
NP_697266.1	identified by similarity to EGAD:43133; match to protein family HMM PF04268
NP_697267.1	identified by similarity to OMNI:NTL02ML5639
NP_697268.1	identified by match to protein family HMM PF01614
NP_697269.1	identified by match to protein family HMM PF01547
NP_697270.1	identified by match to protein family HMM PF00528
NP_697271.1	identified by match to protein family HMM PF00528
NP_697272.1	identified by similarity to SP:Q00752; match to protein family HMM PF00005; match to protein family HMM PF03459
NP_697273.1	identified by match to protein family HMM PF01188; match to protein family HMM PF02746
NP_697274.1	identified by similarity to GP:15140572; match to protein family HMM PF05336
NP_697275.1	identified by match to protein family HMM PF01408
NP_697277.1	identified by match to protein family HMM PF00106
NP_697278.1	identified by similarity to GP:15140576; match to protein family HMM PF01557
NP_697279.1	identified by match to protein family HMM PF01188
NP_697281.1	identified by similarity to OMNI:NTL02ML5069; match to protein family HMM PF03884
NP_697282.1	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell
NP_697283.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
NP_697284.1	identified by match to protein family HMM PF01451
NP_697285.1	identified by similarity to OMNI:NTL02ML5073
NP_697286.1	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer
NP_697287.1	identified by similarity to GP:15073540
NP_697288.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
NP_697289.1	identified by similarity to OMNI:NTL02ML5077
NP_697290.1	identified by match to protein family HMM PF00589; match to protein family HMM PF02899
NP_697292.1	identified by match to protein family HMM PF02498
NP_697294.1	identified by match to protein family HMM PF00239
NP_697298.1	identified by similarity to OMNI:NTL02ML3521
NP_697301.1	identified by similarity to SP:P42888; match to protein family HMM PF01774
NP_697302.1	UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter
NP_697303.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active
NP_697304.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits
NP_697305.1	involved in the assembly of the urease metallocenter; possible nickel donor
NP_697306.1	identified by similarity to SP:Q07402; match to protein family HMM PF01730
NP_697307.1	identified by similarity to EGAD:19477; match to protein family HMM PF01495; match to protein family HMM TIGR00101
NP_697308.1	identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518
NP_697310.1	identified by similarity to GP:15075163; match to protein family HMM TIGR01730
NP_697311.1	identified by match to protein family HMM PF00873
NP_697312.1	catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position
NP_697313.1	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide
NP_697314.1	identified by match to protein family HMM PF00440
NP_697315.1	identified by match to protein family HMM PF00293
NP_697316.1	catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines
NP_697317.1	function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain
NP_697318.1	identified by similarity to GP:15073317
NP_697319.1	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family
NP_697320.1	identified by similarity to GP:15073237
NP_697321.1	identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549
NP_697322.1	identified by similarity to OMNI:NTL03PA01240
NP_697323.1	activates fatty acids by binding to coenzyme A
NP_697324.1	identified by match to protein family HMM PF00440
NP_697325.1	identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730
NP_697326.1	identified by match to protein family HMM PF00873; match to protein family HMM TIGR00915
NP_697329.1	identified by match to protein family HMM PF00497
NP_697330.1	identified by match to protein family HMM PF00535
NP_697331.1	identified by similarity to GP:15155336; match to protein family HMM PF03976
NP_697332.1	identified by match to protein family HMM PF00512; match to protein family HMM PF02518
NP_697333.1	identified by similarity to GP:15073446
NP_697335.1	DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine
NP_697336.1	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation
NP_697337.1	becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers
NP_697338.1	protein associated with Co2+ and Mg2+ efflux
NP_697339.1	catalyzes the conversion of O-succinylhomoserine and sulfide to homocysteine; second step in methionine biosynthesis
NP_697340.1	Catalyzes the deamination of dCTP to form dUTP
NP_697341.1	identified by match to protein family HMM PF00165; match to protein family HMM PF01965
NP_697342.1	identified by similarity to GP:15155415
NP_697343.1	identified by similarity to OMNI:NTL02ML6482; match to protein family HMM PF00188
NP_697344.1	identified by similarity to EGAD:8949; match to protein family HMM PF01554; match to protein family HMM TIGR00797
NP_697345.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors
NP_697346.1	identified by similarity to GP:15073480
NP_697347.1	identified by similarity to OMNI:NTL02ML4408
NP_697348.1	identified by similarity to EGAD:139406; match to protein family HMM PF00561; match to protein family HMM TIGR01249
NP_697349.1	identified by match to protein family HMM PF00072; match to protein family HMM PF00196
NP_697350.1	identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518
NP_697352.1	homopentamer; channel that opens in response to pressure or hypoosmotic shock
NP_697353.1	catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine
NP_697354.1	identified by match to protein family HMM PF01522
NP_697355.1	identified by similarity to GP:12837556; match to protein family HMM PF01755
NP_697356.1	identified by similarity to GP:15157577
NP_697358.1	identified by match to protein family HMM PF00126; match to protein family HMM PF03466
NP_697359.1	identified by similarity to OMNI:NTL03PA03432; match to protein family HMM PF03788
NP_697360.1	identified by similarity to OMNI:NTL03PA03431; match to protein family HMM PF04172
NP_697362.1	identified by similarity to GP:15155313
NP_697363.1	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine
NP_697364.1	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate
NP_697365.1	identified by similarity to SP:Q44532; match to protein family HMM PF00175; match to protein family HMM PF00970
NP_697368.1	identified by similarity to EGAD:19651; match to protein family HMM PF00278; match to protein family HMM TIGR01047
NP_697369.1	identified by similarity to GP:15141437; match to protein family HMM PF03435
NP_697371.1	identified by similarity to GP:9695312; match to protein family HMM PF05544
NP_697373.1	identified by similarity to SP:O82855; match to protein family HMM PF01554; match to protein family HMM TIGR00797
NP_697374.1	identified by match to protein family HMM PF00072; match to protein family HMM PF00196
NP_697375.1	identified by similarity to GP:15162042; match to protein family HMM PF04290
NP_697376.1	identified by match to protein family HMM TIGR00786
NP_697377.1	identified by match to protein family HMM PF03480; match to protein family HMM TIGR01409
NP_697378.1	identified by similarity to OMNI:NTL02ML3955
NP_697379.1	identified by similarity to OMNI:NTL02ML3956; match to protein family HMM PF01522
NP_697380.1	identified by similarity to GP:15140674
NP_697381.1	identified by similarity to OMNI:NTL02ML3958; match to protein family HMM PF00111; match to protein family HMM PF00941; match to protein family HMM PF01799; match to protein family HMM PF03450
NP_697382.1	identified by match to protein family HMM PF01315; match to protein family HMM PF02738
NP_697383.1	identified by similarity to OMNI:CC2617
NP_697384.1	identified by match to protein family HMM PF00126; match to protein family HMM PF03466
NP_697385.1	identified by similarity to GP:15140681
NP_697386.1	Catalyzes the deamination of guanine
NP_697387.1	identified by similarity to EGAD:40602; match to protein family HMM PF05161
NP_697388.1	identified by match to protein family HMM PF03597; match to protein family HMM TIGR00847
NP_697389.1	identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525
NP_697390.1	identified by similarity to EGAD:10086; match to protein family HMM PF05751
NP_697392.1	identified by match to protein family HMM PF00034; match to protein family HMM TIGR00782
NP_697393.1	identified by similarity to EGAD:125983; match to protein family HMM PF05545
NP_697394.1	CcoO; FixO
NP_697395.1	CcoN; FixN
NP_697396.1	identified by match to protein family HMM PF01475
NP_697398.1	identified by similarity to GP:13235366; match to protein family HMM PF01323; match to protein family HMM TIGR01409
NP_697399.1	identified by match to protein family HMM PF00171
NP_697400.1	identified by similarity to EGAD:7337; match to protein family HMM PF00165; match to protein family HMM PF01035; match to protein family HMM PF02805; match to protein family HMM TIGR00589
NP_697401.1	identified by similarity to GP:15073235; match to protein family HMM PF03960; match to protein family HMM TIGR01617
NP_697402.1	identified by similarity to GP:15156192
NP_697403.1	in Escherichia coli SbmA is involved in uptake of microcin J25; functions along with FhuA, TonB, and ExbB/D in this capacity; in Sinorhizobium meliloti, BacA is essential and required for symbiosis; defects appear to affect the cell envelope
NP_697404.1	identified by similarity to OMNI:NTL02ML5836
NP_697405.1	identified by similarity to OMNI:NTL02ML5837
NP_697406.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
NP_697407.1	identified by similarity to SP:P04475
NP_697409.1	identified by similarity to GP:14026921
NP_697412.1	identified by similarity to EGAD:21946
NP_697413.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0
NP_697414.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0
NP_697415.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B' is part of the membrane proton channel.
NP_697416.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.
NP_697417.1	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids
NP_697418.1	identified by similarity to GP:15073771; match to protein family HMM PF04055
NP_697419.1	identified by similarity to GP:15155690
NP_697425.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
NP_697427.1	identified by match to protein family HMM PF01343
NP_697428.1	exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH
NP_697430.1	identified by similarity to GP:15073779
NP_697431.1	identified by similarity to GP:15073778
NP_697432.1	identified by match to protein family HMM PF00348
NP_697433.1	identified by match to protein family HMM PF00515
NP_697434.1	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
NP_697435.1	glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
NP_697436.1	identified by match to protein family HMM PF01300; match to protein family HMM PF03481; match to protein family HMM TIGR00057
NP_697437.1	identified by match to protein family HMM PF01565; match to protein family HMM PF02913
NP_697438.1	identified by similarity to OMNI:VCA0423; match to protein family HMM PF05016
NP_697439.1	identified by similarity to GP:3337067
NP_697441.1	identified by similarity to GP:15155604
NP_697442.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_697443.1	identified by match to protein family HMM PF00441; match to protein family HMM PF02770
NP_697444.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
NP_697445.1	UbiA prenyltransferase catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin
NP_697446.1	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate
NP_697447.1	identified by similarity to GP:14026958
NP_697448.1	identified by match to protein family HMM PF00226; match to protein family HMM PF01556
NP_697450.1	Catalyzes a key regulatory step in fatty acid biosynthesis
NP_697453.1	identified by similarity to GP:15160282
NP_697454.1	identified by similarity to GP:14027592; match to protein family HMM PF04028
NP_697455.1	identified by similarity to GP:15073831
NP_697456.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
NP_697457.1	identified by match to protein family HMM PF00925; match to protein family HMM PF00926; match to protein family HMM TIGR00506
NP_697458.1	identified by match to protein family HMM PF00850
NP_697459.1	catalyzes the bidirectional exonucleolytic cleavage of DNA
NP_697460.1	identified by match to protein family HMM PF00597
NP_697461.1	identified by similarity to OMNI:NTL02ML3629; match to protein family HMM PF04226
NP_697462.1	identified by similarity to OMNI:NTL02ML3630
NP_697463.1	identified by similarity to OMNI:CC3178; match to protein family HMM PF02678; match to protein family HMM PF05726
NP_697464.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
NP_697465.1	identified by similarity to EGAD:20008; match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478
NP_697467.1	identified by similarity to GP:15074050; match to protein family HMM PF03641; match to protein family HMM TIGR00730
NP_697468.1	identified by similarity to GP:15157092
NP_697469.1	identified by match to protein family HMM PF01476
NP_697470.1	identified by match to protein family HMM PF00005; match to protein family HMM PF00664
NP_697471.1	catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine
NP_697472.1	identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473
NP_697473.1	identified by match to protein family HMM PF00106
NP_697474.1	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway
NP_697476.1	identified by similarity to OMNI:NTL02ML6179; match to protein family HMM PF02674
NP_697477.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
NP_697478.1	unwinds double stranded DNA
NP_697479.1	identified by similarity to SP:P30010; match to protein family HMM PF02353
NP_697480.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
NP_697481.1	identified by similarity to GP:15074068
NP_697482.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
NP_697483.1	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
NP_697484.1	identified by similarity to OMNI:VC2163
NP_697485.1	identified by similarity to EGAD:97846; match to protein family HMM PF00698; match to protein family HMM TIGR00128
NP_697486.1	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
NP_697487.1	carries the fatty acid chain in fatty acid biosynthesis
NP_697489.1	FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
NP_697490.1	identified by similarity to GP:15074077; match to protein family HMM PF02618; match to protein family HMM TIGR00247
NP_697491.1	identified by similarity to OMNI:NTL02ML6198; match to protein family HMM PF03755; match to protein family HMM TIGR00255
NP_697492.1	Essential for recycling GMP and indirectly, cGMP
NP_697493.1	identified by similarity to EGAD:30245; match to protein family HMM PF01523
NP_697494.1	identified by similarity to GP:15073834
NP_697495.1	identified by similarity to EGAD:8295; match to protein family HMM PF00116; match to protein family HMM PF02790
NP_697496.1	identified by similarity to EGAD:5976; match to protein family HMM PF00115
NP_697497.1	converts protoheme IX and farnesyl diphosphate to heme O
NP_697498.1	identified by similarity to OMNI:NTL02ML5908
NP_697499.1	involved in the insertion of copper into subunit I of cytochrome C oxidase
NP_697500.1	identified by match to protein family HMM PF00510
NP_697501.1	identified by similarity to GP:14026992
NP_697502.1	identified by match to protein family HMM PF02104
NP_697503.1	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
NP_697504.1	catalyzes the formation of O-phospho-L-homoserine from L-homoserine
NP_697505.1	An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids
NP_697506.1	identified by match to protein family HMM PF00578
NP_697507.1	identified by similarity to OMNI:NTL02ML5920
NP_697508.1	identified by similarity to OMNI:NTL02ML5921; match to protein family HMM PF02622
NP_697509.1	identified by match to protein family HMM PF00563; match to protein family HMM PF00785; match to protein family HMM PF00990; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254
NP_697510.1	identified by match to protein family HMM PF00583
NP_697511.1	identified by similarity to OMNI:NTL01BH2408; match to protein family HMM PF00675; match to protein family HMM PF05193
NP_697512.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
NP_697515.1	identified by similarity to OMNI:NTL03PA02200; match to protein family HMM PF00563
NP_697516.1	identified by similarity to OMNI:NTL02ML1736
NP_697517.1	identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549
NP_697518.1	identified by match to protein family HMM PF00654
NP_697519.1	identified by similarity to EGAD:154344; match to protein family HMM PF01555
NP_697520.1	identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509
NP_697521.1	identified by similarity to EGAD:19424; match to protein family HMM PF00730; match to protein family HMM TIGR01084
NP_697522.1	identified by similarity to GP:15073860
NP_697524.1	identified by similarity to GP:15155781; match to protein family HMM PF01323; match to protein family HMM TIGR01409
NP_697525.1	identified by similarity to OMNI:NTL02ML5933; match to protein family HMM PF02463; match to protein family HMM PF02483; match to protein family HMM TIGR02168
NP_697526.1	identified by similarity to SP:P13512; match to protein family HMM PF01545; match to protein family HMM TIGR01297
NP_697527.1	identified by match to protein family HMM PF00903
NP_697528.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
NP_697531.1	identified by similarity to OMNI:NTL02ML5941
NP_697532.1	identified by match to protein family HMM PF00753
NP_697533.1	identified by match to protein family HMM PF02632
NP_697534.1	catalyzes the formation of glyoxylate from (S)-ureidoglycolate
NP_697535.1	identified by similarity to GP:15157490; match to protein family HMM PF00576
NP_697536.1	identified by similarity to GP:15157607
NP_697537.1	identified by similarity to GP:6009656; match to protein family HMM PF02719
NP_697538.1	identified by match to protein family HMM PF00953
YP_089629.1	identified by similarity to GB:CAE42096.1
YP_089630.1	identified by similarity to OMNI:CC1206
NP_697539.1	identified by match to protein family HMM PF00551
NP_697540.1	identified by similarity to GP:4071215
NP_697541.1	identified by similarity to SP:Q56903; match to protein family HMM PF00005
NP_697542.1	identified by similarity to SP:Q56902; match to protein family HMM PF01061
NP_697543.1	identified by similarity to EGAD:15706; match to protein family HMM PF01041
NP_697544.1	identified by similarity to EGAD:11583; match to protein family HMM TIGR01472
NP_697545.1	identified by similarity to GP:4071219
YP_089631.1	identified by similarity to GP:4071222
NP_697546.1	identified by similarity to EGAD:46813
NP_697547.1	identified by similarity to PIR:PN0685; match to protein family HMM PF01609
YP_089632.1	identified by similarity to GP:4071222
NP_697548.1	identified by match to protein family HMM PF00534
NP_697549.1	identified by similarity to EGAD:36179
NP_697550.1	identified by similarity to GP:482819
NP_697551.1	identified by similarity to GP:4071219
NP_697552.1	identified by similarity to GP:4071222; match to protein family HMM PF01609
NP_697553.1	identified by similarity to EGAD:8806; match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880
NP_697554.1	identified by similarity to EGAD:97081; match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM TIGR01479
NP_697555.1	identified by similarity to SP:P29954
NP_697556.1	identified by similarity to GP:3249553; match to protein family HMM PF00534
NP_697558.1	identified by similarity to SP:P04983; match to protein family HMM PF00005
NP_697559.1	identified by similarity to SP:P36948; match to protein family HMM PF02653
NP_697560.1	identified by similarity to SP:P02926; match to protein family HMM PF00532
NP_697561.1	identified by similarity to GP:15075918
NP_697562.1	identified by match to protein family HMM PF01408; match to protein family HMM PF02894
NP_697563.1	catalyzes the interconversion of D-xylose to D-xylulose
NP_697564.1	identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01312
NP_697565.1	identified by match to protein family HMM PF00356; match to protein family HMM PF00532
NP_697566.1	identified by match to protein family HMM PF00165
NP_697568.1	catalyzes the formation of betaine from betaine aldehyde
NP_697569.1	catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine
NP_697570.1	HTH-type; bet1; Repressor involved in choline regulation of the bet genes
NP_697571.1	identified by similarity to OMNI:NTL02ML6007
NP_697572.1	identified by match to protein family HMM PF01272
NP_697573.1	identified by similarity to EGAD:69439; match to protein family HMM PF05012; match to protein family HMM TIGR01550
NP_697574.1	identified by match to protein family HMM PF04014; match to protein family HMM TIGR01439
NP_697575.1	identified by similarity to GP:15620053; match to protein family HMM PF01544
NP_697576.1	identified by match to protein family HMM PF00392
NP_697578.1	identified by similarity to GP:15073896
NP_697579.1	identified by similarity to OMNI:NTL02ML6012; match to protein family HMM PF05872
NP_697580.1	identified by similarity to GP:15141233; match to protein family HMM PF03734; match to protein family HMM TIGR01409
NP_697581.1	identified by similarity to SP:Q51645; match to protein family HMM PF00702; match to protein family HMM TIGR01428; match to protein family HMM TIGR01493
NP_697582.1	identified by match to protein family HMM PF00081; match to protein family HMM PF02777
NP_697584.1	identified by similarity to EGAD:17797; match to protein family HMM PF00326; match to protein family HMM PF02897
NP_697585.1	identified by similarity to EGAD:35422; match to protein family HMM PF05443
NP_697588.1	identified by similarity to GP:15155912
NP_697589.2	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
NP_697590.1	identified by similarity to OMNI:NTL02ML6032; match to protein family HMM PF02657
NP_697591.1	identified by similarity to SP:Q52968
NP_697593.1	identified by match to protein family HMM PF00512; match to protein family HMM PF02518
NP_697594.1	identified by match to protein family HMM PF01471
NP_697596.1	identified by similarity to GP:15073936
NP_697597.1	identified by similarity to GP:15073939
NP_697598.1	identified by similarity to OMNI:NTL02ML6040
NP_697599.1	identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074
NP_697602.1	identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537
NP_697603.1	identified by similarity to GP:15155959
NP_697604.1	identified by match to protein family HMM PF04586; match to protein family HMM TIGR01543
NP_697605.1	identified by match to protein family HMM TIGR01554
NP_697606.1	identified by similarity to GP:15155962
NP_697607.1	identified by similarity to GP:15155963; match to protein family HMM TIGR01563
NP_697609.1	identified by similarity to GP:15155964
NP_697610.1	identified by similarity to OMNI:CC2781; match to protein family HMM TIGR02126
NP_697611.1	identified by similarity to GP:15155967
NP_697612.1	identified by similarity to GP:15155972
NP_697613.1	identified by similarity to GP:15155973
NP_697614.1	identified by similarity to GP:15155974
NP_697615.1	identified by match to protein family HMM PF00877
NP_697616.1	identified by similarity to GP:15155977
NP_697617.1	identified by similarity to OMNI:NTL02ML6060
NP_697618.1	identified by similarity to OMNI:CC2766; match to protein family HMM PF00072; match to protein family HMM PF00486
NP_697619.1	identified by similarity to GP:14027143; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518
NP_697620.1	identified by similarity to GP:15073947
NP_697622.1	CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane
NP_697623.1	identified by similarity to EGAD:8346; match to protein family HMM PF01578; match to protein family HMM TIGR00353
NP_697624.1	identified by similarity to SP:P45406; match to protein family HMM PF03918
NP_697625.1	identified by similarity to EGAD:21403; match to protein family HMM PF00089; match to protein family HMM PF00595
NP_697626.1	identified by match to protein family HMM PF00072; match to protein family HMM PF00486
NP_697627.1	identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518
NP_697628.1	catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme
NP_697629.1	identified by similarity to GP:15156909; match to protein family HMM PF01755; match to protein family HMM PF04932
NP_697630.1	identified by match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF02518; match to protein family HMM TIGR00229
NP_697631.1	identified by similarity to OMNI:NTL02ML6073; match to protein family HMM PF01433
NP_697632.1	identified by match to protein family HMM PF00892
NP_697633.1	identified by match to protein family HMM PF00083
NP_697634.1	identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758
NP_697635.1	identified by similarity to EGAD:4120; match to protein family HMM PF05187
NP_697636.1	identified by similarity to OMNI:NTL02ML6082; match to protein family HMM PF03372
NP_697637.1	Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile
NP_697640.1	identified by similarity to OMNI:CC2434; match to protein family HMM PF00043; match to protein family HMM PF02798
NP_697641.1	identified by similarity to GP:15073978
NP_697643.1	identified by similarity to OMNI:NTL02ML6087
NP_697644.1	identified by similarity to OMNI:VC0940; match to protein family HMM PF02588
NP_697647.1	identified by similarity to OMNI:NTL02ML2997
NP_697648.1	identified by similarity to OMNI:NTL02ML6597; match to protein family HMM PF04241
NP_697649.1	catalyzes the formation of histidinol phosphate and 2-oxoglutarate from glutamate and imidazole acetol-phosphate
NP_697650.1	identified by match to protein family HMM PF00589; match to protein family HMM PF02899
NP_697651.1	identified by similarity to GP:841493; match to protein family HMM PF02530
NP_697653.1	identified by similarity to GP:841494; match to protein family HMM PF02530
NP_697656.1	identified by similarity to EGAD:126787
NP_697657.1	identified by match to protein family HMM PF01464
NP_697660.1	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis
NP_697661.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
NP_697662.1	identified by match to protein family HMM PF03167
NP_697663.1	identified by match to protein family HMM PF01936
NP_697665.1	Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
NP_697666.1	identified by match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691
NP_697667.1	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
NP_697668.1	identified by match to protein family HMM PF00027; match to protein family HMM PF00325
NP_697669.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
NP_697670.1	identified by similarity to EGAD:36955
NP_697671.1	identified by match to protein family HMM PF00165; match to protein family HMM PF02311
NP_697672.1	identified by similarity to GP:14027200
NP_697673.1	Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids
NP_697674.1	identified by similarity to OMNI:NTL02ML6121; match to protein family HMM PF00461
NP_697675.1	cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity
NP_697677.1	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome
NP_697678.1	involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA
NP_697679.1	identified by similarity to GP:15074034
NP_697680.1	identified by similarity to OMNI:NTL02ML6141
NP_697681.1	identified by match to protein family HMM PF01571
NP_697682.1	Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides
NP_697683.1	identified by similarity to GP:14027225
NP_697684.1	identified by similarity to GP:15074038
NP_697685.1	identified by similarity to OMNI:NTL02ML6146
NP_697686.1	identified by match to protein family HMM PF00293
NP_697687.1	identified by similarity to EGAD:107474; match to protein family HMM PF02586
NP_697688.1	identified by match to protein family HMM PF01810
NP_697691.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
NP_697693.1	catalyzes the formation of 2-isopropylmalate from 1-methyl-2-oxobutanoate and acetyl-CoA
NP_697694.1	identified by match to protein family HMM PF00892; match to protein family HMM TIGR00688
NP_697695.1	identified by match to protein family HMM PF01551
NP_697696.1	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin
NP_697697.1	catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate)
NP_697699.1	identified by similarity to EGAD:7471; match to protein family HMM PF04453
NP_697700.1	identified by similarity to OMNI:NTL02ML6205; match to protein family HMM PF03739
NP_697701.1	identified by match to protein family HMM PF03739
NP_697703.1	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides
NP_697704.1	binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB
NP_697705.1	identified by similarity to OMNI:NTL02ML6220
NP_697706.1	identified by match to protein family HMM PF00005
NP_697707.1	identified by similarity to OMNI:NTL02ML6242; match to protein family HMM PF05163
NP_697708.1	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate
NP_697709.1	identified by similarity to GP:14027320; match to protein family HMM PF03724
NP_697710.1	identified by similarity to SP:P30749; match to protein family HMM PF02391
NP_697711.1	identified by match to protein family HMM PF02597; match to protein family HMM TIGR01682
NP_697712.1	identified by similarity to SP:P06978; match to protein family HMM PF01066; match to protein family HMM TIGR00560
NP_697713.2	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
NP_697714.1	identified by match to protein family HMM PF00106
NP_697715.1	identified by similarity to SP:Q45689; match to protein family HMM PF01389
NP_697716.1	identified by similarity to OMNI:CC0147; match to protein family HMM PF02798
NP_697717.1	identified by match to protein family HMM PF00445
NP_697718.1	identified by similarity to OMNI:NTL02ML6225
NP_697719.1	identified by similarity to OMNI:NTL02ML6221; match to protein family HMM PF04378
NP_697720.1	identified by similarity to GP:15074178; match to protein family HMM PF00892
NP_697721.1	identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879
NP_697722.1	identified by similarity to OMNI:NTL02ML2404
NP_697723.2	glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate
NP_697724.1	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
NP_697727.1	identified by match to protein family HMM PF01594
NP_697728.1	identified by similarity to GP:14027358
NP_697731.1	identified by match to protein family HMM PF00106
NP_697734.1	identified by similarity to SP:P33231; match to protein family HMM PF02652; match to protein family HMM TIGR00795
NP_697735.1	identified by similarity to GP:15074650; match to protein family HMM PF04800
NP_697737.1	identified by match to protein family HMM PF00929
NP_697738.1	identified by similarity to EGAD:40466
NP_697739.1	identified by match to protein family HMM PF00583
NP_697740.1	identified by match to protein family HMM PF01381
NP_697743.1	identified by match to protein family HMM PF00665
NP_697744.1	identified by similarity to GP:11071899
NP_697750.1	identified by similarity to GP:15162152
NP_697753.1	catalyzes the formation of L-homocysteine from cystathionine
NP_697754.1	identified by match to protein family HMM PF01569
NP_697755.1	identified by similarity to EGAD:35379; match to protein family HMM PF00497; match to protein family HMM TIGR01096
NP_697757.1	identified by similarity to EGAD:35466; match to protein family HMM PF00528; match to protein family HMM TIGR01726
NP_697758.1	identified by similarity to SP:P45768; match to protein family HMM PF00528; match to protein family HMM TIGR01726
NP_697759.1	identified by similarity to EGAD:31037; match to protein family HMM PF00005
NP_697760.1	catalyzes the formation of catechol from salicylate
NP_697761.1	identified by similarity to GP:15074414
NP_697762.1	catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate
NP_697763.1	identified by match to protein family HMM PF02541
NP_697764.1	identified by similarity to GP:17739552; match to protein family HMM PF00570; match to protein family HMM PF01612; match to protein family HMM TIGR01388
NP_697765.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
NP_697766.1	identified by similarity to GP:14027664
NP_697768.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
NP_697769.1	Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate
NP_697770.1	identified by similarity to OMNI:NTL02ML6587
NP_697771.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
NP_697772.1	catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA
NP_697773.1	identified by similarity to OMNI:NTL02ML6608
NP_697774.1	identified by match to protein family HMM PF01047
NP_697776.1	identified by match to protein family HMM PF01471; match to protein family HMM TIGR01409
NP_697779.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
NP_697780.1	identified by similarity to GP:14027700; match to protein family HMM PF03477; match to protein family HMM TIGR00244
NP_697781.1	identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00326
NP_697782.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
NP_697783.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
NP_697784.1	Regulates rRNA biosynthesis by transcriptional antitermination
NP_697785.1	pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient
NP_697786.1	identified by similarity to GP:15074151; match to protein family HMM PF04355
NP_697787.1	identified by similarity to OMNI:NTL02ML6629; match to protein family HMM PF03981
NP_697788.1	identified by similarity to GP:15074153
NP_697790.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
NP_697791.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
NP_697792.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
NP_697793.1	identified by similarity to OMNI:NTL02ML6634
NP_697794.1	identified by similarity to SP:P30743; match to protein family HMM PF00893
NP_697795.1	identified by match to protein family HMM PF02397
NP_697796.1	identified by similarity to GP:14027725
NP_697797.1	identified by similarity to EGAD:19692; match to protein family HMM PF02563
NP_697800.1	identified by similarity to OMNI:NTL02ML6654
NP_697801.1	identified by match to protein family HMM PF02628
NP_697802.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis
NP_697803.1	catalyzes the formation of putrescine from agmatine
NP_697804.1	forms a direct contact with the tRNA during translation
NP_697805.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
NP_697806.1	identified by similarity to OMNI:NTL02ML6663; match to protein family HMM PF03061; match to protein family HMM TIGR00369
NP_697807.1	catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
NP_697816.1	Catalyzes the transfer of electrons from NADH to quinone
NP_697817.1	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen
NP_697818.1	Catalyzes the transfer of electrons from NADH to quinone
NP_697819.1	Catalyzes the transfer of electrons from NADH to quinone
NP_697820.1	Catalyzes the transfer of electrons from NADH to quinone
NP_697821.1	part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase
NP_697822.1	Catalyzes the transfer of electrons from NADH to quinone
NP_697823.1	Catalyzes the transfer of electrons from NADH to quinone
NP_697824.1	Catalyzes the transfer of electrons from NADH to quinone
NP_697825.1	Catalyzes the transfer of electrons from NADH to quinone
NP_697826.1	Catalyzes the transfer of electrons from NADH to quinone
NP_697827.1	Catalyzes the transfer of electrons from NADH to ubiquinone
NP_697828.1	Catalyzes the transfer of electrons from NADH to quinone
NP_697829.1	Catalyzes the transfer of electrons from NADH to quinone
NP_697830.1	catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon
NP_697831.1	identified by match to protein family HMM PF00753
NP_697832.1	identified by match to protein family HMM PF00903
NP_697833.1	identified by similarity to OMNI:NTL02ML1060
NP_697836.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
NP_697837.1	identified by match to protein family HMM PF02687
NP_697838.1	identified by similarity to SP:P75957; match to protein family HMM PF00005
NP_697839.1	catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase
NP_697840.1	identified by similarity to OMNI:NTL02ML0034
NP_697842.1	identified by similarity to OMNI:NTL02ML1990
NP_697844.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
NP_697845.1	TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs
NP_697846.1	identified by match to protein family HMM PF00459
NP_697847.1	identified by match to protein family HMM PF00083; match to protein family HMM TIGR00710
NP_697849.1	identified by match to protein family HMM TIGR00365
NP_697850.1	identified by match to protein family HMM PF01722
NP_697851.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
NP_697853.1	identified by match to protein family HMM PF00043
NP_697854.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
NP_697855.1	With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway
NP_697856.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
NP_697857.1	identified by similarity to OMNI:NTL02ML0054
NP_697858.1	identified by similarity to EGAD:11526; match to protein family HMM PF03328
NP_697859.1	identified by similarity to GP:15074696
NP_697862.1	identified by match to protein family HMM PF00903
NP_697863.1	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide
NP_697864.1	identified by similarity to EGAD:101737; match to protein family HMM PF00834; match to protein family HMM TIGR01163
NP_697865.1	Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA
NP_697866.1	identified by match to protein family HMM PF00107
NP_697867.1	FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.
NP_697868.1	FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
NP_697869.1	Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides
NP_697870.1	identified by similarity to OMNI:NTL02ML6731; match to protein family HMM PF05838
NP_697871.1	identified by similarity to EGAD:30590; match to protein family HMM PF01263
NP_697872.1	identified by similarity to SP:P37647; match to protein family HMM PF00294
NP_697873.1	identified by similarity to GP:15141057
NP_697874.1	identified by match to protein family HMM PF01979
NP_697875.1	identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549
NP_697876.1	identified by similarity to OMNI:CC1306; match to protein family HMM PF01207; match to protein family HMM TIGR00742
NP_697877.1	identified by similarity to OMNI:NTL02ML0447; match to protein family HMM PF00077
NP_697878.1	identified by similarity to OMNI:NTL02ML0446
NP_697879.1	catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole
NP_697880.1	catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole
NP_697881.1	identified by match to protein family HMM PF01037
NP_697882.1	identified by similarity to GP:15074814
NP_697883.1	identified by match to protein family HMM PF00565
NP_697885.1	identified by similarity to EGAD:35423
NP_697886.1	identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633
NP_697887.1	identified by similarity to GP:15075908; match to protein family HMM PF04391
NP_697888.1	identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049
NP_697889.1	dGTPase type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate
NP_697890.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
NP_697891.1	identified by similarity to OMNI:NTL02ML0862
NP_697892.1	identified by match to protein family HMM PF00933
NP_697893.1	identified by similarity to GP:14021929; match to protein family HMM PF02616
NP_697894.1	identified by similarity to OMNI:NTL02ML0859; match to protein family HMM PF04079; match to protein family HMM TIGR00281
NP_697895.1	TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes
NP_697896.1	mediates the export of protein precursors bearing twin-arginine signal peptides
NP_697897.1	identified by similarity to EGAD:10132; match to protein family HMM PF00902; match to protein family HMM TIGR00945
NP_697898.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_697899.1	catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate
NP_697900.1	catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins
NP_697901.1	identified by match to protein family HMM PF01476; match to protein family HMM PF01551
NP_697902.1	identified by similarity to OMNI:NTL02ML0849; match to protein family HMM PF05673
NP_697903.1	identified by similarity to SP:Q9ZG87; match to protein family HMM PF02699; match to protein family HMM TIGR00739
NP_697904.1	part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF
NP_697905.1	identified by similarity to GP:14021915; match to protein family HMM PF04635
NP_697906.1	identified by similarity to OMNI:NTL02ML0845
NP_697907.1	TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine
NP_697908.1	identified by similarity to GP:15074478
NP_697909.1	identified by similarity to OMNI:NTL02ML0840
NP_697911.1	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer
NP_697912.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
NP_697913.1	identified by match to protein family HMM PF00583
NP_697915.1	Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis
NP_697917.1	identified by similarity to GP:15074249
NP_697918.1	leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys
NP_697919.1	an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
NP_697920.1	composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism
NP_697921.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
NP_697922.1	identified by match to protein family HMM PF01323
NP_697923.1	identified by similarity to GP:14021229; match to protein family HMM PF01435
NP_697924.1	identified by match to protein family HMM PF00155
NP_697925.1	identified by match to protein family HMM TIGR00757
NP_697928.1	identified by similarity to OMNI:NTL02ML0166; match to protein family HMM PF01520
NP_697929.1	identified by similarity to SP:P02918; match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074
NP_697931.1	identified by similarity to EGAD:46813
NP_697934.1	identified by similarity to GP:15074676; match to protein family HMM PF04305
NP_697935.1	identified by similarity to EGAD:18740; match to protein family HMM PF00578
NP_697936.1	identified by similarity to GP:14021072
NP_697937.1	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
NP_697938.1	catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling
NP_697939.1	identified by similarity to GP:12024949; match to protein family HMM PF00893
NP_697940.1	identified by similarity to GP:15074671
NP_697941.1	identified by similarity to EGAD:14639; match to protein family HMM PF00266
NP_697942.1	with SufCD activates cysteine desulfurase SufS
NP_697943.1	identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978
NP_697944.1	identified by similarity to OMNI:NTL02ML0017; match to protein family HMM PF01458; match to protein family HMM TIGR01981
NP_697945.1	identified by match to protein family HMM PF00266; match to protein family HMM TIGR01979
NP_697946.1	identified by similarity to GP:14021086; match to protein family HMM PF01883
NP_697947.1	identified by match to protein family HMM PF00535
NP_697948.1	catalyzes the phosphorylation of NAD to NADP
NP_697949.1	identified by similarity to EGAD:20681; match to protein family HMM PF00270; match to protein family HMM PF00271
NP_697950.1	identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049
NP_697951.1	identified by similarity to OMNI:NTL02ML0072
NP_697953.1	identified by match to protein family HMM PF00403
NP_697955.1	identified by similarity to OMNI:NTL02ML0876; match to protein family HMM PF01135
NP_697956.1	identified by match to protein family HMM PF02321; match to protein family HMM TIGR01844
NP_697957.1	identified by similarity to GP:14021943
NP_697959.1	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain
NP_697960.1	identified by match to protein family HMM PF03446
NP_697961.1	identified by match to protein family HMM PF02798
NP_697962.1	identified by similarity to EGAD:6543; match to protein family HMM PF00528; match to protein family HMM TIGR01726
NP_697963.1	identified by similarity to EGAD:8421; match to protein family HMM PF00528; match to protein family HMM TIGR01726
NP_697965.1	identified by similarity to EGAD:37042; match to protein family HMM PF00497
NP_697966.1	identified by similarity to SP:P32125; match to protein family HMM PF03205; match to protein family HMM TIGR00176
NP_697967.1	identified by similarity to SP:P32173
NP_697968.1	together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z
NP_697969.1	identified by similarity to OMNI:NTL02ML0426
NP_697970.1	identified by match to protein family HMM PF01360
NP_697971.1	identified by similarity to SP:P00923; match to protein family HMM PF05681; match to protein family HMM PF05683; match to protein family HMM TIGR00722; match to protein family HMM TIGR00723
NP_697972.1	identified by similarity to GP:15156702
NP_697974.1	identified by similarity to GP:15159178; match to protein family HMM PF04226
NP_697976.1	identified by match to protein family HMM PF00589
NP_697981.1	identified by similarity to EGAD:151783
NP_697982.1	identified by similarity to EGAD:176501
NP_697984.1	identified by similarity to GP:15073548
NP_697985.1	identified by similarity to GP:15073547
NP_697986.1	identified by similarity to EGAD:46813
NP_697989.1	identified by similarity to GP:5616097
NP_697990.1	identified by similarity to EGAD:103475; match to protein family HMM PF00534
NP_697992.1	identified by similarity to OMNI:PG0293; match to protein family HMM PF05838
NP_697997.1	identified by similarity to EGAD:91898; match to protein family HMM PF03960; match to protein family HMM TIGR00014
NP_697998.1	identified by match to protein family HMM PF03330; match to protein family HMM TIGR00413
NP_697999.1	identified by match to protein family HMM PF00768
NP_698000.1	catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP)
NP_698001.1	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA
NP_698003.1	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content
NP_698004.1	identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010
NP_698005.1	identified by similarity to GP:15074532; match to protein family HMM PF00753
NP_698006.1	responsible for transport of beta-1,2-glucans from the cytoplasm to periplasm; inner membrane ABC transporter permease component; Cgt; ChvA; NdvA
YP_089633.1	identified by similarity to EGAD:7861; match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005
NP_698008.1	identified by match to protein family HMM PF00892
NP_698009.1	identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549
NP_698010.1	identified by similarity to GP:15156553
NP_698011.1	identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653
NP_698012.1	identified by similarity to EGAD:35417; match to protein family HMM PF00543
NP_698013.1	identified by similarity to OMNI:CC1965; match to protein family HMM PF01256; match to protein family HMM PF03853; match to protein family HMM TIGR00196; match to protein family HMM TIGR00197
NP_698015.1	catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate
NP_698017.1	Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway
NP_698018.1	identified by similarity to OMNI:NTL02ML0413
NP_698019.1	catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense
NP_698020.1	identified by match to protein family HMM PF01474; match to protein family HMM TIGR01358
NP_698021.1	identified by similarity to SP:P00556; match to protein family HMM PF01219
NP_698022.1	NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers
NP_698023.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
NP_698024.1	NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate
NP_698025.1	identified by match to protein family HMM PF01188; match to protein family HMM PF02746
NP_698026.1	identified by match to protein family HMM PF01740; match to protein family HMM PF02405
NP_698027.1	identified by match to protein family HMM PF00005
NP_698028.1	identified by match to protein family HMM PF02470
NP_698029.1	identified by similarity to GP:15156733; match to protein family HMM PF03886
NP_698031.1	identified by similarity to GP:15074750; match to protein family HMM TIGR01369; match to protein family HMM TIGR01612
NP_698033.1	identified by similarity to EGAD:5699; match to protein family HMM PF00111
NP_698034.1	identified by similarity to OMNI:NTL02ML0625
NP_698035.1	identified by similarity to SP:P28822; match to protein family HMM PF00809; match to protein family HMM TIGR01496
NP_698036.1	identified by similarity to EGAD:14090; match to protein family HMM PF02152; match to protein family HMM TIGR00525; match to protein family HMM TIGR00526
NP_698037.1	identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498
NP_698038.1	identified by similarity to GP:14021684
NP_698039.1	identified by similarity to OMNI:NTL02ML0615; match to protein family HMM PF05128; match to protein family HMM TIGR01620
NP_698040.1	identified by similarity to GP:14021682; match to protein family HMM PF04317
NP_698041.1	identified by similarity to GP:14021681
NP_698042.1	identified by similarity to EGAD:19456; match to protein family HMM PF01258
NP_698045.1	identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229
NP_698046.1	identified by similarity to GP:15140178; match to protein family HMM PF03486
NP_698047.1	identified by match to protein family HMM PF00144
NP_698048.1	Catalyzes the rate-limiting step in dNTP synthesis
NP_698050.1	identified by match to protein family HMM PF00293
NP_698051.1	catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively
NP_698052.1	identified by similarity to OMNI:NTL02ML0109; match to protein family HMM PF00582
NP_698053.1	identified by match to protein family HMM PF00994
NP_698054.1	stationary phase that binds TrpR repressor
NP_698056.1	catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic
NP_698057.1	identified by similarity to GP:14021336; match to protein family HMM PF00270; match to protein family HMM PF00271
NP_698058.1	CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis
NP_698059.1	identified by similarity to GP:15156264
NP_698060.1	identified by similarity to GP:15074554; match to protein family HMM PF00581
NP_698061.1	identified by match to protein family HMM PF00583
NP_698062.1	identified by similarity to OMNI:NTL02ML3729; match to protein family HMM PF00990; match to protein family HMM TIGR00254
NP_698063.1	identified by match to protein family HMM PF02550
NP_698064.1	identified by match to protein family HMM PF00083; match to protein family HMM TIGR00711
NP_698065.1	identified by match to protein family HMM PF00529
NP_698066.1	identified by similarity to SP:P42327; match to protein family HMM PF00107
NP_698067.1	identified by similarity to OMNI:NTL01XF00221; match to protein family HMM PF00557
NP_698068.1	identified by similarity to GP:15157001; match to protein family HMM PF00515
NP_698069.1	identified by similarity to GP:2708271; match to protein family HMM PF01758
NP_698071.1	identified by similarity to EGAD:45971; match to protein family HMM PF01370; match to protein family HMM TIGR01179
NP_698072.1	functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase Era
NP_698073.1	identified by similarity to OMNI:NTL02ML0717
NP_698074.1	identified by match to protein family HMM PF00881
NP_698075.1	identified by similarity to OMNI:NTL02ML0719
NP_698076.1	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)
NP_698077.1	identified by match to protein family HMM PF00768
NP_698078.1	identified by similarity to OMNI:NTL02ML0724; match to protein family HMM PF01809; match to protein family HMM TIGR00278
NP_698079.1	identified by match to protein family HMM PF01592
NP_698080.1	involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer
NP_698081.2	PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers
NP_698082.1	identified by similarity to OMNI:NTL02ML0729; match to protein family HMM PF01734
NP_698083.1	identified by match to protein family HMM PF00589
NP_698087.1	identified by match to protein family HMM PF00239
NP_698088.1	identified by match to protein family HMM PF02498
NP_698089.1	identified by match to protein family HMM PF02515
NP_698090.1	identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771
NP_698091.1	identified by match to protein family HMM PF00126; match to protein family HMM PF03466
NP_698092.1	identified by match to protein family HMM PF00296
NP_698093.1	identified by match to protein family HMM PF00873
NP_698094.1	identified by similarity to OMNI:VC0165; match to protein family HMM TIGR01730
NP_698095.1	identified by match to protein family HMM PF00440
NP_698096.1	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)
NP_698097.1	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step
NP_698098.1	identified by similarity to OMNI:NTL02ML0580; match to protein family HMM PF00160
NP_698099.1	identified by similarity to OMNI:CC1584; match to protein family HMM PF00160
NP_698100.1	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA
NP_698102.1	negatively supercoils closed circular double-stranded DNA
NP_698103.1	identified by similarity to OMNI:NTL02ML0590; match to protein family HMM PF01914; match to protein family HMM TIGR00427
NP_698105.1	identified by match to protein family HMM PF00392
NP_698107.1	identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621
NP_698109.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
NP_698110.1	identified by similarity to EGAD:8582; match to protein family HMM PF00216
NP_698111.1	identified by similarity to EGAD:18728; match to protein family HMM PF00004; match to protein family HMM PF02190; match to protein family HMM PF05362; match to protein family HMM TIGR00763
NP_698113.1	binds and unfolds substrates as part of the ClpXP protease
NP_698114.1	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates
NP_698116.1	Stimulates the elongation of poly(A) tails
NP_698119.1	involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain
NP_698120.1	identified by similarity to EGAD:5624; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199
NP_698121.1	identified by similarity to EGAD:10502; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM TIGR00229
NP_698122.1	identified by similarity to EGAD:19665; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199; match to protein family HMM TIGR01818
NP_698123.1	identified by similarity to EGAD:22187; match to protein family HMM PF00512; match to protein family HMM PF02518
NP_698124.1	identified by similarity to EGAD:30550; match to protein family HMM PF01207; match to protein family HMM TIGR00737
NP_698125.2	bifunctional enzyme involved in formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate and 2-C-methyl-D-erythritol 2,4-cyclodiphosphate and CMP from 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; binds divalent cations
NP_698126.1	identified by similarity to GP:15074388; match to protein family HMM PF02464; match to protein family HMM TIGR00199
NP_698127.1	identified by match to protein family HMM PF00106
NP_698128.1	identified by similarity to OMNI:NTL02ML0302; match to protein family HMM PF03654
NP_698129.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
NP_698131.1	E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide
NP_698132.1	identified by similarity to SP:Q9R9N3; match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; match to protein family HMM TIGR01349
NP_698133.1	catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase
NP_698134.1	identified by similarity to SP:Q9R9N5; match to protein family HMM PF00676
NP_698135.1	identified by similarity to OMNI:NTL02ML0293; match to protein family HMM PF04977
NP_698136.1	identified by similarity to OMNI:CC1925
NP_698137.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
NP_698138.1	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis
NP_698139.1	CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
NP_698141.1	identified by similarity to GP:15157507; match to protein family HMM PF03734
NP_698142.1	identified by match to protein family HMM PF03840
NP_698143.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
NP_698145.1	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate
NP_698146.1	involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water
NP_698147.1	MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis
NP_698148.1	identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177
NP_698149.1	Represses a number of genes involved in the response to DNA damage
NP_698150.1	identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360
NP_698152.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
NP_698153.1	type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH
NP_698154.1	catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM
NP_698155.1	identified by similarity to GP:15074439
NP_698156.1	catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis
NP_698157.1	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP
NP_698158.1	adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis
NP_698159.1	identified by match to protein family HMM PF01103
NP_698161.1	identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054
NP_698162.1	identified by similarity to EGAD:108469; match to protein family HMM PF01148
NP_698163.1	catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate
NP_698164.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
NP_698165.2	Catalyzes the phosphorylation of UMP to UDP
NP_698166.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
NP_698167.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
NP_698168.1	identified by similarity to GP:9107039
NP_698169.1	identified by similarity to OMNI:NTL02ML0524
NP_698170.1	identified by similarity to OMNI:NTL02ML0525; match to protein family HMM PF01042
NP_698171.1	identified by similarity to EGAD:9938; match to protein family HMM PF03009
NP_698172.1	identified by similarity to OMNI:NTL02ML0527; match to protein family HMM PF04339
NP_698173.1	identified by match to protein family HMM PF01230
NP_698174.1	identified by similarity to EGAD:17776; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM TIGR01967
NP_698175.1	involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA
NP_698177.1	identified by match to protein family HMM PF00768
NP_698178.1	identified by similarity to GP:15074343
NP_698179.1	identified by similarity to OMNI:NTL02ML0534
NP_698180.1	identified by similarity to SP:P42630; match to protein family HMM PF03313; match to protein family HMM PF03315; match to protein family HMM TIGR00720
NP_698182.1	identified by similarity to OMNI:NTL02ML0537; match to protein family HMM PF02698
NP_698183.1	identified by similarity to OMNI:NTL02ML1038
NP_698184.1	identified by match to protein family HMM PF00376
NP_698186.1	identified by similarity to GP:15141218
NP_698187.1	identified by similarity to GP:15156035
NP_698188.1	NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis
NP_698191.1	identified by similarity to OMNI:CC2122
NP_698192.1	identified by similarity to GP:15159740; match to protein family HMM PF01381
NP_698193.1	identified by similarity to EGAD:2033; match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02785; match to protein family HMM PF02786
NP_698194.1	MDM; functions in conversion of succinate to propionate
NP_698195.1	identified by similarity to GP:15140764
NP_698196.1	identified by similarity to OMNI:NTL01BH2941; match to protein family HMM TIGR02123
NP_698198.1	identified by similarity to EGAD:7185; match to protein family HMM TIGR02122
NP_698199.1	converts L-glutamate to D-glutamate, a component of peptidoglycan
NP_698200.1	identified by match to protein family HMM PF00588; match to protein family HMM TIGR00050
NP_698201.1	identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382
NP_698202.1	identified by similarity to OMNI:NTL03PA04336
NP_698203.1	Converts isocitrate to alpha ketoglutarate
NP_698204.1	identified by similarity to SP:P00634; match to protein family HMM PF00245
NP_698205.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_698206.1	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs
NP_698208.1	identified by match to protein family HMM PF00691
NP_698209.1	identified by similarity to GP:15075335
NP_698210.1	identified by match to protein family HMM PF00004
NP_698211.1	identified by similarity to EGAD:18959; match to protein family HMM PF00089; match to protein family HMM PF00595
NP_698212.1	is a component of the macrolide binding site in the peptidyl transferase center
NP_698213.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
NP_698214.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
NP_698215.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
NP_698216.1	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP
NP_698217.1	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase
NP_698218.1	late assembly protein
NP_698219.1	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7
NP_698220.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
NP_698221.1	binds 5S rRNA along with protein L5 and L25
NP_698222.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
NP_698223.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
NP_698224.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif
NP_698225.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
NP_698226.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
NP_698227.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
NP_698228.1	primary binding protein; helps mediate assembly; involved in translation fidelity
NP_698229.1	one of the stabilizing components for the large ribosomal subunit
NP_698230.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
NP_698231.1	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation
NP_698232.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
NP_698233.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
NP_698234.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
NP_698235.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
NP_698236.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
NP_698237.1	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
NP_698238.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
NP_698239.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
NP_698240.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
NP_698241.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
NP_698242.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
NP_698245.1	identified by similarity to GP:15074283
NP_698246.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter
NP_698247.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
NP_698249.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
NP_698250.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
NP_698251.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
NP_698252.1	binds directly to 23S ribosomal RNA
NP_698253.1	Modulates Rho-dependent transcription termination
NP_698254.1	forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force
NP_698255.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
NP_698258.1	identified by match to protein family HMM PF00588; match to protein family HMM TIGR00186
NP_698259.1	identified by match to protein family HMM PF01694
NP_698261.1	identified by similarity to OMNI:NTL02ML0144
NP_698262.1	identified by similarity to OMNI:NTL02ML0142
NP_698263.1	identified by similarity to OMNI:NTL02ML0140; match to protein family HMM PF00132
NP_698264.1	identified by similarity to GP:15074417
NP_698265.1	identified by match to protein family HMM PF00132; match to protein family HMM TIGR01172
NP_698267.1	identified by match to protein family HMM PF00561
NP_698268.1	identified by similarity to GP:14021198; match to protein family HMM PF02643
NP_698269.1	identified by match to protein family HMM PF00313
NP_698271.1	identified by match to protein family HMM PF00903
NP_698272.1	identified by similarity to OMNI:NT01MC4682
NP_698273.1	identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644
NP_698274.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
NP_698276.1	type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese
NP_698277.1	catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine
NP_698278.1	identified by match to protein family HMM PF00155
NP_698280.1	identified by similarity to GP:14021808
NP_698281.1	identified by similarity to OMNI:NTL02ML0128
NP_698284.1	Regulatory factor involved in maltose metabolism
NP_698285.1	catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn
NP_698286.1	Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase
NP_698287.1	identified by similarity to GP:14018349
NP_698288.1	identified by match to protein family HMM PF00590; match to protein family HMM TIGR01468
NP_698289.1	identified by match to protein family HMM PF01077; match to protein family HMM PF03460
NP_698290.1	catalyzes the interconversion of precorrin-8X and hydrogenobyrinate
NP_698291.1	catalyzes the formation of precorrin-3 from precorrin-2
NP_698292.1	identified by match to protein family HMM PF00590; match to protein family HMM PF01890; match to protein family HMM TIGR01466
NP_698295.1	identified by match to protein family HMM PF01613
NP_698296.1	identified by similarity to SP:P02917; match to protein family HMM PF01094
NP_698297.1	CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
NP_698298.1	identified by similarity to SP:P21633; match to protein family HMM PF00155
NP_698299.1	responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid
NP_698300.1	identified by similarity to SP:P21631; match to protein family HMM PF00590; match to protein family HMM TIGR01469
NP_698301.1	Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A
NP_698302.1	CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6
NP_698303.1	identified by similarity to SP:P21922; match to protein family HMM PF00590; match to protein family HMM TIGR01465
NP_698305.1	identified by similarity to OMNI:NTL02ML0945
NP_698306.1	identified by similarity to OMNI:NTL02ML0946; match to protein family HMM PF01925
NP_698307.1	identified by match to protein family HMM PF00892
NP_698308.1	catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide
NP_698309.1	with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism
NP_698310.1	identified by match to protein family HMM PF02492
NP_698311.1	catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP
NP_698312.1	identified by similarity to OMNI:NTL02ML1033
NP_698313.1	identified by similarity to GP:14022104
NP_698314.1	catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
NP_698316.1	identified by match to protein family HMM PF03446; match to protein family HMM TIGR01692
NP_698318.1	identified by similarity to OMNI:CC3473
NP_698320.1	identified by match to protein family HMM PF00165; match to protein family HMM PF01965
NP_698321.1	identified by similarity to OMNI:NTL02ML1001
NP_698323.1	part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF
NP_698324.1	identified by match to protein family HMM PF00999; match to protein family HMM PF02254; match to protein family HMM TIGR00932
NP_698326.1	identified by similarity to GP:15074696
NP_698327.1	identified by similarity to SP:P16702; match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140
NP_698328.1	identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02139
NP_698329.1	identified by similarity to SP:P06997; match to protein family HMM PF01547; match to protein family HMM TIGR00971
NP_698331.1	identified by match to protein family HMM PF00571; match to protein family HMM PF03471; match to protein family HMM PF03741
NP_698332.1	identified by match to protein family HMM PF00597
NP_698335.1	identified by similarity to EGAD:154080; match to protein family HMM PF00036
NP_698336.1	identified by match to protein family HMM PF05025
NP_698337.1	identified by similarity to OMNI:NTL02ML3842; match to protein family HMM PF00106
NP_698338.1	identified by match to protein family HMM PF00005
NP_698339.1	identified by similarity to GP:6273663; match to protein family HMM PF02653
NP_698341.1	identified by similarity to GP:6273662; match to protein family HMM PF00532
NP_698342.1	identified by match to protein family HMM PF01408; match to protein family HMM PF02894
NP_698343.1	identified by similarity to SP:P15031; match to protein family HMM PF00005
NP_698344.1	identified by match to protein family HMM PF01032
NP_698345.1	identified by similarity to PIR:S54437; match to protein family HMM PF01497
NP_698346.1	identified by similarity to SP:P06129; match to protein family HMM PF00593
NP_698349.1	identified by match to protein family HMM PF00005
NP_698350.1	identified by match to protein family HMM PF00529
NP_698353.1	identified by similarity to OMNI:NTL02EC1981; match to protein family HMM PF02638
NP_698355.1	UreA, with UreB and UreC, catalyzes the hydrolysis of urea to ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter
NP_698356.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) does not seem to be involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo
NP_698357.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits
NP_698358.1	involved in the assembly of the urease metallocenter; possible nickel donor
NP_698359.1	identified by similarity to EGAD:8726; match to protein family HMM PF01730
NP_698360.1	identified by similarity to SP:P42871; match to protein family HMM PF01495; match to protein family HMM TIGR00101
NP_698361.1	identified by similarity to EGAD:20614; match to protein family HMM PF01774
NP_698362.1	identified by similarity to GP:1905970; match to protein family HMM PF03253
NP_698364.1	catalyzes the ATP-dependent transport of cobalt
NP_698365.1	identified by similarity to EGAD:28613
NP_698366.1	identified by similarity to GP:6138845; match to protein family HMM PF02361
NP_698367.1	identified by match to protein family HMM PF00005
NP_698368.1	identified by match to protein family HMM PF02537; match to protein family HMM PF03625
NP_698369.1	may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling
NP_698371.1	identified by similarity to EGAD:6639
NP_698373.1	identified by similarity to EGAD:38480; match to protein family HMM PF02567; match to protein family HMM TIGR00654
NP_698374.1	identified by similarity to OMNI:NTL02ML1103
NP_698375.1	identified by similarity to GP:3236220
NP_698376.1	identified by match to protein family HMM PF00155
NP_698378.1	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis
NP_698379.1	identified by match to protein family HMM PF00440
NP_698381.1	identified by similarity to SP:P30016; match to protein family HMM PF02705
NP_698383.1	involved in the de novo synthesis of pyridoxine (Vitamin B6)
NP_698385.1	identified by similarity to OMNI:NTL02ML1120
NP_698386.1	with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit
NP_698387.1	catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive
NP_698388.1	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity
NP_698389.1	identified by match to protein family HMM PF00702; match to protein family HMM TIGR00338; match to protein family HMM TIGR01488
NP_698390.1	identified by similarity to OMNI:CC1477; match to protein family HMM PF03486; match to protein family HMM TIGR00275
NP_698392.1	identified by similarity to OMNI:CC2758; match to protein family HMM PF00089; match to protein family HMM PF00595
NP_698393.1	identified by similarity to GP:14022214
NP_698394.1	identified by similarity to EGAD:9363; match to protein family HMM PF01145; match to protein family HMM TIGR01932
NP_698395.1	identified by similarity to SP:Q9KV09; match to protein family HMM PF01145; match to protein family HMM TIGR01933
NP_698396.1	identified by match to protein family HMM PF00186
NP_698397.1	ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived
NP_698398.1	identified by similarity to OMNI:NTL02ML1156
NP_698399.1	identified by match to protein family HMM PF00083; match to protein family HMM TIGR00710
NP_698401.1	identified by match to protein family HMM PF00440
NP_698402.1	identified by similarity to OMNI:NTL02ML1160
NP_698404.1	identified by similarity to OMNI:NTL02ML1161
NP_698405.1	identified by similarity to OMNI:NTL02ML1162
NP_698406.1	identified by similarity to OMNI:NTL02ML1167; match to protein family HMM PF05170
NP_698408.1	identified by match to protein family HMM PF01565; match to protein family HMM PF02913
NP_698409.1	identified by similarity to OMNI:NTL02ML3966
NP_698410.1	identified by similarity to OMNI:NTL01XF00279
NP_698411.1	identified by similarity to EGAD:14237; match to protein family HMM PF00580
NP_698412.1	identified by similarity to GP:14022272
NP_698413.1	identified by similarity to OMNI:NTL02ML1201; match to protein family HMM PF00132
NP_698414.1	identified by match to protein family HMM PF02630
NP_698415.1	methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype
NP_698416.1	identified by similarity to OMNI:NTL02ML1206; match to protein family HMM PF00557
NP_698417.1	identified by similarity to GP:14022279
NP_698418.1	this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB
NP_698419.1	identified by similarity to SP:P05824; match to protein family HMM TIGR00634
NP_698420.1	identified by similarity to EGAD:40678; match to protein family HMM PF03696
NP_698422.1	zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis
NP_698423.1	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function
NP_698424.1	identified by similarity to SP:O30994; match to protein family HMM PF02491; match to protein family HMM TIGR01174
NP_698425.1	identified by similarity to SP:O30993; match to protein family HMM PF03799
NP_698426.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
NP_698427.1	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis
NP_698428.1	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
NP_698429.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
NP_698430.1	identified by similarity to EGAD:20048; match to protein family HMM PF01098
NP_698431.1	UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation
NP_698432.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NP_698433.1	identified by similarity to EGAD:15807; match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM TIGR01143
NP_698434.1	involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate
NP_698435.1	identified by match to protein family HMM PF00905; match to protein family HMM PF03717
NP_698436.1	identified by similarity to GP:14022298
NP_698437.1	identified by similarity to GP:15075206; match to protein family HMM PF01795; match to protein family HMM TIGR00006
NP_698439.1	identified by similarity to GP:17740175; match to protein family HMM PF01566; match to protein family HMM TIGR01197
NP_698441.1	identified by match to protein family HMM PF01464
NP_698442.1	identified by match to protein family HMM PF01471; match to protein family HMM PF01510
NP_698443.1	identified by match to protein family HMM PF00226
NP_698445.1	identified by match to protein family HMM PF01183
NP_698446.1	identified by match to protein family HMM PF02219; match to protein family HMM TIGR00676
NP_698447.1	identified by match to protein family HMM PF01022; match to protein family HMM PF01209
NP_698448.1	identified by similarity to OMNI:NTL02ML1250
NP_698449.1	identified by match to protein family HMM PF00083; match to protein family HMM TIGR00883
NP_698451.1	catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate
NP_698452.1	ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence
NP_698454.1	identified by similarity to OMNI:NTL02ML1266
NP_698456.1	identified by similarity to OMNI:NTL01PM1376
NP_698457.1	identified by match to protein family HMM PF00355
NP_698458.1	identified by similarity to EGAD:91746; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970
NP_698459.1	identified by similarity to SP:P16680; match to protein family HMM PF03831
NP_698460.1	identified by similarity to SP:P21369; match to protein family HMM PF00857
NP_698461.1	identified by match to protein family HMM PF04332
NP_698464.1	identified by match to protein family HMM PF02275
NP_698465.1	identified by similarity to GP:14523684
NP_698470.1	identified by match to protein family HMM PF00589
NP_698471.1	identified by similarity to EGAD:40996; match to protein family HMM PF04402
NP_698473.1	identified by similarity to OMNI:NTL02ML1869; match to protein family HMM PF05779
NP_698474.1	identified by similarity to OMNI:NTL02ML1900
NP_698475.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria
NP_698476.1	synthesizes RNA primers at the replication forks
NP_698477.1	identified by match to protein family HMM PF02690
NP_698478.1	identified by similarity to GP:15075342; match to protein family HMM PF02637
NP_698479.1	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers
NP_698481.1	identified by similarity to GP:15074511; match to protein family HMM PF04228
NP_698482.1	identified by similarity to GP:15157321
NP_698483.1	identified by similarity to GP:15157322; match to protein family HMM PF04397
NP_698484.1	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity
NP_698486.1	identified by similarity to GP:2808503
NP_698487.1	identified by match to protein family HMM PF00293
NP_698488.1	identified by similarity to SP:Q9Z3S6; match to protein family HMM PF00313
NP_698489.1	identified by match to protein family HMM PF00043; match to protein family HMM PF02798
NP_698491.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
NP_698494.1	identified by match to protein family HMM PF00126; match to protein family HMM PF03466
NP_698495.1	identified by similarity to SP:P09625; match to protein family HMM PF00070; match to protein family HMM TIGR01292
NP_698496.1	identified by similarity to GP:3288671; match to protein family HMM PF02386
NP_698498.1	identified by similarity to SP:P56901; match to protein family HMM PF01037
NP_698499.1	identified by similarity to SP:O68547; match to protein family HMM PF00534
NP_698500.1	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NP_698501.1	identified by similarity to EGAD:91665
NP_698503.1	identified by match to protein family HMM PF00892
NP_698504.1	identified by match to protein family HMM PF04342
NP_698505.1	identified by similarity to GP:15074829
NP_698506.1	identified by match to protein family HMM PF03061
NP_698507.1	identified by similarity to GP:15162152
NP_698508.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
NP_698509.1	identified by match to protein family HMM PF00313
NP_698511.1	identified by similarity to GP:15075354
NP_698512.1	identified by match to protein family HMM PF00753
NP_698515.1	identified by match to protein family HMM PF01047
NP_698516.1	identified by similarity to EGAD:19467; match to protein family HMM PF00072; match to protein family HMM PF00486
NP_698517.1	identified by similarity to EGAD:163236; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518
NP_698519.1	identified by similarity to SP:P37584; match to protein family HMM PF01588
NP_698520.1	identified by similarity to OMNI:NTL02ML2065
NP_698521.1	identified by similarity to GP:15075365; match to protein family HMM PF04380
NP_698523.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
NP_698524.1	identified by similarity to OMNI:NTL02ML2069; match to protein family HMM PF02636
NP_698525.1	identified by similarity to OMNI:NTL02ML2070; match to protein family HMM PF02578; match to protein family HMM TIGR00726
NP_698526.1	identified by match to protein family HMM PF00557
NP_698527.1	identified by similarity to GP:15075370
NP_698528.1	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP
NP_698529.1	identified by similarity to GP:15074722
NP_698530.1	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response
NP_698531.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
NP_698532.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
NP_698533.1	identified by match to protein family HMM PF01575
NP_698534.1	identified by match to protein family HMM PF01575
NP_698535.1	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis
NP_698536.1	identified by match to protein family HMM PF02167
NP_698537.1	identified by similarity to EGAD:46867; match to protein family HMM PF00032; match to protein family HMM PF00033
NP_698538.1	identified by similarity to EGAD:9907; match to protein family HMM PF00355; match to protein family HMM TIGR01409; match to protein family HMM TIGR01416
NP_698539.1	identified by match to protein family HMM PF00588
NP_698541.1	identified by similarity to GP:15074760
NP_698542.1	catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis
NP_698543.1	identified by match to protein family HMM PF00583
NP_698544.1	identified by match to protein family HMM PF01743
NP_698545.1	identified by match to protein family HMM PF00293
NP_698546.1	identified by similarity to OMNI:NTL02ML2109
NP_698547.1	identified by similarity to GP:2689172
NP_698548.1	identified by similarity to OMNI:NTL02ML2111; match to protein family HMM PF01882
NP_698550.1	identified by similarity to OMNI:NTL02ML2113
NP_698551.1	identified by match to protein family HMM PF00583
NP_698553.1	identified by match to protein family HMM PF03922
NP_698554.1	identified by match to protein family HMM PF00293
NP_698555.1	identified by similarity to GP:14023230; match to protein family HMM PF00149
NP_698557.2	identified by match to protein family HMM PF00682; match to protein family HMM TIGR00970
NP_698559.1	identified by similarity to GP:14023215; match to protein family HMM PF01545; match to protein family HMM TIGR01297
NP_698561.1	trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II
NP_698562.1	identified by similarity to SP:P19494; match to protein family HMM PF01037
NP_698563.1	identified by match to protein family HMM PF01047
NP_698564.1	identified by similarity to GP:17430574
NP_698565.1	identified by similarity to GP:14027266
NP_698566.1	identified by similarity to OMNI:NTL02ML2131
NP_698570.1	identified by similarity to GP:19880073; match to protein family HMM PF04069
NP_698571.1	identified by similarity to GP:17982347; match to protein family HMM PF00528
NP_698572.1	identified by similarity to SP:P46920; match to protein family HMM PF00005
NP_698573.1	identified by similarity to SP:P37313; match to protein family HMM PF00005
NP_698574.1	identified by similarity to SP:P37314; match to protein family HMM PF00005
NP_698575.1	identified by similarity to SP:P94312; match to protein family HMM PF00528
NP_698576.1	identified by similarity to SP:P94311; match to protein family HMM PF00528
NP_698579.1	identified by match to protein family HMM PF01022
NP_698580.1	identified by match to protein family HMM PF00588
NP_698581.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
NP_698583.1	identified by similarity to GP:15075739
NP_698584.1	identified by similarity to GP:15075740
NP_698585.1	identified by similarity to GP:14023239
NP_698586.1	identified by similarity to GP:17740928
NP_698588.1	identified by similarity to OMNI:NTL02ML2168
NP_698589.1	identified by similarity to EGAD:41053; match to protein family HMM PF00072; match to protein family HMM PF00486
NP_698590.1	identified by similarity to GP:15075741
NP_698591.1	identified by match to protein family HMM PF01041
NP_698592.1	identified by match to protein family HMM PF01408; match to protein family HMM PF02894
NP_698595.1	identified by match to protein family HMM PF01755
NP_698596.1	identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229
NP_698598.1	identified by similarity to EGAD:20142; match to protein family HMM PF05170
NP_698599.1	identified by similarity to GP:16502083; match to protein family HMM PF00528
NP_698600.1	identified by similarity to SP:P23860; match to protein family HMM PF00528
NP_698601.1	identified by similarity to SP:P31134; match to protein family HMM PF00005; match to protein family HMM TIGR01187
NP_698602.1	identified by similarity to GP:15979381; match to protein family HMM PF01547
NP_698603.1	identified by match to protein family HMM PF01381
NP_698604.1	Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates
NP_698605.1	identified by similarity to OMNI:NTL02ML5126
NP_698608.1	Acts on the hydroxyl group at position 7 of the steroid frame
NP_698609.1	identified by similarity to EGAD:23950; match to protein family HMM PF00106
NP_698611.1	identified by similarity to EGAD:10584; match to protein family HMM PF01914
NP_698612.1	identified by similarity to EGAD:150060; match to protein family HMM PF01389
NP_698617.1	identified by match to protein family HMM PF00106
NP_698618.1	identified by similarity to OMNI:NTL02ML0801; match to protein family HMM PF00532
NP_698619.1	identified by similarity to SP:P04984; match to protein family HMM PF02653
NP_698620.1	identified by similarity to SP:P04983; match to protein family HMM PF00005
NP_698626.1	identified by match to protein family HMM PF01614
NP_698627.1	identified by similarity to EGAD:16804; match to protein family HMM PF00171; match to protein family HMM TIGR01780
NP_698630.1	identified by match to protein family HMM PF01844
NP_698633.1	identified by match to protein family HMM PF00730
NP_698634.1	this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu
NP_698635.1	catalyzes the formation of malate from glyoxylate and acetyl-CoA
NP_698636.1	identified by match to protein family HMM PF00583
NP_698637.1	binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters
YP_089634.1	identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005
NP_698640.1	identified by similarity to SP:O30976; match to protein family HMM PF01475
NP_698643.1	in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media
NP_698644.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
NP_698645.1	identified by match to protein family HMM PF02518; match to protein family HMM PF05227
NP_698647.1	identified by similarity to OMNI:NTL02ML2854
NP_698648.1	identified by similarity to OMNI:NTL02ML2849; match to protein family HMM PF05239
NP_698652.1	identified by similarity to SP:P18783; match to protein family HMM PF01618
NP_698653.1	identified by similarity to SP:Q05606; match to protein family HMM PF02472
NP_698654.1	identified by match to protein family HMM TIGR01352
NP_698655.1	identified by similarity to GP:15074996
NP_698656.1	identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730
NP_698657.1	identified by similarity to EGAD:46813
NP_698658.1	identified by similarity to PIR:PN0685; match to protein family HMM PF01609
NP_698660.1	catalyzes the formation of dUMP from dUTP
NP_698661.1	identified by match to protein family HMM PF01037; match to protein family HMM TIGR01199
NP_698662.1	identified by similarity to OMNI:NTL02ML4136
NP_698663.1	identified by similarity to GP:13932326; match to protein family HMM PF00310
NP_698664.1	identified by match to protein family HMM PF01988
NP_698665.1	identified by match to protein family HMM PF00083
NP_698666.1	identified by similarity to OMNI:NTL02ML2989
NP_698668.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
NP_698669.1	identified by match to protein family HMM PF00583
NP_698670.1	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate
NP_698672.1	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate
NP_698673.1	identified by match to protein family HMM PF01758
NP_698674.1	identified by similarity to GP:17742129
NP_698675.1	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NP_698676.1	identified by similarity to EGAD:13183; match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM TIGR01241
NP_698677.1	identified by similarity to GP:15075760; match to protein family HMM PF01171
NP_698680.1	identified by similarity to EGAD:9123; match to protein family HMM PF00691
NP_698682.1	forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA
NP_698683.1	identified by similarity to GP:13898975
NP_698684.1	identified by match to protein family HMM PF02472
NP_698685.1	identified by match to protein family HMM PF01618
NP_698687.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
NP_698688.1	plays an essential role in ATP-dependent branch migration of the Holliday junction
NP_698689.1	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity
NP_698690.1	identified by similarity to OMNI:NTL02ML3016
NP_698691.1	identified by similarity to GP:9961345
NP_698692.1	catalyzes the formation of thiamine monophosphate from 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate and 4-methyl-5-(2-phosphono-oxyethyl)-thiazole
NP_698693.1	identified by similarity to GP:14024100
NP_698695.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
NP_698696.1	identified by similarity to EGAD:15335; match to protein family HMM PF00459
NP_698698.1	identified by similarity to GP:15075801
NP_698699.1	identified by match to protein family HMM PF00691
NP_698700.1	identified by match to protein family HMM PF00005; match to protein family HMM PF00664
NP_698701.1	RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome
NP_698702.1	identified by similarity to GP:15075777; match to protein family HMM PF01709; match to protein family HMM TIGR01033
NP_698703.1	identified by match to protein family HMM PF02632
NP_698704.1	identified by similarity to GP:14026938
NP_698705.1	identified by similarity to OMNI:NTL02ML3047; match to protein family HMM PF03741
NP_698706.1	identified by similarity to OMNI:NTL02ML3048; match to protein family HMM PF00149; match to protein family HMM TIGR00282
NP_698707.1	identified by match to protein family HMM PF01812
NP_698708.1	identified by similarity to OMNI:NTL02ML2891; match to protein family HMM PF05164
NP_698711.1	catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase
NP_698712.1	catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate
NP_698713.1	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway
NP_698714.1	identified by similarity to GP:15075794
NP_698715.1	identified by match to protein family HMM PF00501
NP_698716.1	identified by similarity to GP:7206791
NP_698720.1	identified by similarity to OMNI:CC2103; match to protein family HMM PF03061; match to protein family HMM TIGR00369
NP_698721.1	identified by similarity to GP:15076354
NP_698722.1	identified by match to protein family HMM PF00107
NP_698723.1	identified by similarity to GP:15075796
NP_698725.1	identified by match to protein family HMM PF04325
NP_698727.1	identified by similarity to OMNI:NTL02ML2929; match to protein family HMM PF04325
NP_698728.1	identified by similarity to SP:P09028; match to protein family HMM PF00731; match to protein family HMM TIGR01162
NP_698729.1	With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway
NP_698730.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif
NP_698731.1	identified by match to protein family HMM PF00515
NP_698732.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
NP_698734.1	identified by match to protein family HMM PF05013
NP_698737.1	identified by similarity to GP:15157929; match to protein family HMM PF00005
NP_698740.1	identified by similarity to OMNI:NTL02ML2986; match to protein family HMM PF04263
NP_698741.1	part of the thiamine and TPP transport system tbpA-thiPQ
NP_698742.1	permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine
NP_698743.1	identified by match to protein family HMM PF00005; match to protein family HMM TIGR01277
NP_698745.1	identified by match to protein family HMM PF01435
NP_698746.1	identified by similarity to OMNI:NTL03PA02229; match to protein family HMM PF03473
NP_698747.1	binds with the catalytic core of RNA polymerase to produce the holoenzyme; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma-32 is responsible for the expression of heat shock promoters; there are paralogs in Rhizobium and Sinorhizobium; the proteins in this cluster act as secondary heat shock sigma factors; the Rhizobium sigma-32 factor may also be involved in exopolysaccharide production
NP_698750.1	identified by similarity to OMNI:NTL02ML2976; match to protein family HMM PF02559
NP_698751.1	identified by similarity to EGAD:22805; match to protein family HMM PF00037
NP_698753.1	identified by match to protein family HMM PF01479
NP_698755.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis
NP_698757.1	identified by similarity to OMNI:NTL02ML2916; match to protein family HMM PF03928
NP_698758.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
NP_698759.1	glycosyltransferase; polymerizes glycan strands in the peptidoglycan
NP_698760.1	identified by similarity to SP:Q08291; match to protein family HMM PF00348
NP_698761.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
NP_698762.1	identified by similarity to SP:O86034; match to protein family HMM PF00106; match to protein family HMM TIGR01963
NP_698763.1	biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate
NP_698764.1	identified by similarity to SP:P04816; match to protein family HMM PF01094
NP_698767.1	identified by similarity to SP:P04816; match to protein family HMM PF01094
NP_698769.1	identified by similarity to OMNI:NTL02ML3062
NP_698770.1	identified by match to protein family HMM PF00005
NP_698771.1	identified by match to protein family HMM PF02653
NP_698772.1	identified by match to protein family HMM PF02653
NP_698773.1	identified by similarity to GP:9695312; match to protein family HMM PF05544
NP_698775.1	identified by match to protein family HMM PF00392
NP_698776.1	identified by similarity to EGAD:16739; match to protein family HMM PF01047
NP_698778.1	part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane
NP_698779.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
NP_698780.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit
NP_698781.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
NP_698782.1	Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex
NP_698783.1	identified by similarity to GP:15076063
NP_698784.1	binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity
NP_698785.1	similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity
NP_698786.1	identified by similarity to OMNI:NTL02ML3139
NP_698787.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
NP_698788.1	identified by similarity to OMNI:NTL02ML3141; match to protein family HMM PF01168; match to protein family HMM TIGR00044
NP_698790.1	identified by similarity to EGAD:13628
NP_698791.1	Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA
NP_698792.1	identified by similarity to GP:14024231
NP_698793.1	metalloprotease
NP_698794.1	identified by match to protein family HMM PF01029; match to protein family HMM PF01189
NP_698795.1	identified by similarity to GP:14024235
NP_698796.1	involved in de novo purine biosynthesis
NP_698799.1	identified by similarity to GP:15076346; match to protein family HMM PF05088; match to protein family HMM TIGR01612
NP_698800.1	identified by similarity to GP:14024253
NP_698801.1	identified by similarity to GP:14024255; match to protein family HMM PF04536
NP_698802.1	identified by similarity to EGAD:149857; match to protein family HMM PF04011
NP_698804.1	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity
NP_698805.1	catalyzes the interconversion of chorismate to prephenate
NP_698806.1	identified by similarity to EGAD:6526; match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959
NP_698808.1	identified by similarity to OMNI:VC1956
NP_698809.1	identified by match to protein family HMM PF00484
NP_698810.1	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal
NP_698811.1	identified by similarity to OMNI:NTL02ML3181
NP_698812.1	identified by similarity to SP:P28810; match to protein family HMM PF00171; match to protein family HMM TIGR01722
NP_698813.1	identified by match to protein family HMM PF00126; match to protein family HMM PF03466
NP_698814.1	identified by similarity to OMNI:NTL03PA00256
NP_698816.1	hydrolyzes diadenosine polyphosphate
NP_698817.1	identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225
NP_698820.1	SPOUT methyltransferase; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA
NP_698821.1	identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090
NP_698822.1	transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria
NP_698823.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
NP_698824.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
NP_698825.1	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication
NP_698827.1	identified by match to protein family HMM PF00583
NP_698828.1	identified by match to protein family HMM PF00583
NP_698829.1	involved in the peptidyltransferase reaction during translation
NP_698830.1	identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061
NP_698832.1	identified by match to protein family HMM PF01381
NP_698833.1	identified by match to protein family HMM PF03591
NP_698836.1	identified by similarity to OMNI:CC1732
NP_698841.1	identified by match to protein family HMM PF01551
NP_698842.1	identified by similarity to GP:15075231; match to protein family HMM PF03734
NP_698844.1	identified by similarity to EGAD:20010; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM TIGR01369
NP_698845.1	identified by similarity to GP:15159086
NP_698848.1	identified by match to protein family HMM TIGR00536
NP_698849.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
NP_698850.1	identified by similarity to EGAD:36619; match to protein family HMM PF00391; match to protein family HMM PF01590; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01417
NP_698851.1	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.
NP_698852.1	Involved in ubiquinone biosynthesis
NP_698853.1	identified by match to protein family HMM PF00892
NP_698854.1	identified by similarity to GP:15159831
NP_698855.1	identified by match to protein family HMM PF00795
NP_698856.1	identified by similarity to SP:P37687; match to protein family HMM PF00462
NP_698858.1	identified by similarity to EGAD:18112
NP_698859.1	identified by similarity to GP:15075644
NP_698861.1	identified by similarity to GP:14024323
NP_698863.1	identified by similarity to GP:15076107
NP_698864.1	identified by similarity to OMNI:NTL02ML3249
NP_698865.1	catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane
NP_698866.1	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis
NP_698867.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
NP_698868.1	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate
NP_698869.1	unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity
NP_698870.1	identified by similarity to GP:15157855; match to protein family HMM PF04543
NP_698871.1	identified by similarity to GP:15076099
NP_698872.1	identified by match to protein family HMM PF00892
NP_698873.1	identified by similarity to EGAD:30442; match to protein family HMM PF01580
NP_698874.1	identified by similarity to GP:3136068; match to protein family HMM PF00909; match to protein family HMM TIGR00836
NP_698876.1	identified by similarity to SP:P23911; match to protein family HMM PF02551; match to protein family HMM TIGR00189
NP_698877.1	identified by match to protein family HMM PF01360
NP_698878.1	identified by match to protein family HMM PF00903
NP_698879.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase
NP_698880.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol
NP_698881.1	identified by similarity to EGAD:23053; match to protein family HMM PF01127
NP_698882.1	identified by similarity to EGAD:15755; match to protein family HMM PF01127
NP_698883.1	identified by match to protein family HMM PF00583
NP_698884.1	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
NP_698885.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
NP_698886.1	identified by match to protein family HMM PF02133
NP_698887.1	identified by similarity to GP:7739616
NP_698888.1	identified by similarity to GP:15156392; match to protein family HMM PF03992
NP_698889.1	identified by similarity to GP:15156391
NP_698890.1	identified by match to protein family HMM PF01022
NP_698891.1	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
NP_698892.1	Essential for efficient processing of 16S rRNA
NP_698893.1	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs
NP_698894.1	identified by similarity to GP:15157831
NP_698895.1	Catalyzes the oxidation of dihydrolipoamide to lipoamide
NP_698896.1	identified by similarity to GP:14024383
NP_698897.1	identified by match to protein family HMM PF01810
NP_698898.1	identified by similarity to GP:15157838; match to protein family HMM PF01124
NP_698899.1	component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA
NP_698900.1	SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide
NP_698902.1	Catalyzes the only substrate-level phosphorylation in the TCA cycle
NP_698903.1	catalyzes the interconversion of succinyl-CoA and succinate
NP_698904.1	Catalyzes the reversible oxidation of malate to oxaloacetate
NP_698906.1	identified by similarity to GP:15076082; match to protein family HMM PF03969
NP_698907.1	identified by similarity to GP:954748
NP_698909.1	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate
NP_698910.1	identified by similarity to GP:15076264; match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01579
NP_698911.1	identified by similarity to EGAD:5681; match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064
NP_698912.1	Involved in cell division; probably involved in intracellular septation
NP_698913.1	identified by similarity to EGAD:35929; match to protein family HMM PF00753
NP_698915.1	identified by similarity to OMNI:NTL02ML2661
NP_698916.1	identified by similarity to EGAD:16514; match to protein family HMM PF00293
NP_698917.1	identified by match to protein family HMM PF00583
NP_698918.1	bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate
NP_698920.1	identified by similarity to EGAD:7364; match to protein family HMM PF00639
NP_698922.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins
NP_698924.1	identified by similarity to GP:14023746
NP_698925.1	identified by match to protein family HMM PF00884; match to protein family HMM PF02418
NP_698928.1	identified by match to protein family HMM PF00126; match to protein family HMM PF03466
NP_698930.1	identified by match to protein family HMM PF00497
NP_698931.1	identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726
NP_698932.1	identified by match to protein family HMM PF00005
NP_698933.1	identified by match to protein family HMM PF00491
NP_698934.1	catalyzes the formation of fumarate from aspartate
NP_698935.1	identified by similarity to EGAD:31037; match to protein family HMM PF00005
NP_698936.1	identified by similarity to EGAD:14317; match to protein family HMM PF00710
NP_698937.1	identified by match to protein family HMM PF00392
NP_698938.1	identified by similarity to SP:P43843; match to protein family HMM PF00710
NP_698939.1	identified by match to protein family HMM PF00083
NP_698941.1	catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine
NP_698942.1	identified by match to protein family HMM PF00582
NP_698944.1	converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA
NP_698945.1	identified by similarity to SP:P38974; match to protein family HMM PF00766
NP_698946.1	identified by similarity to EGAD:17375; match to protein family HMM PF01012
NP_698947.1	identified by match to protein family HMM TIGR00364
NP_698948.1	identified by match to protein family HMM PF01242
NP_698949.1	identified by match to protein family HMM PF04055
NP_698950.1	identified by match to protein family HMM PF01923; match to protein family HMM TIGR00636
NP_698951.1	identified by similarity to OMNI:NTL02ML2682
NP_698952.1	identified by match to protein family HMM PF00106
NP_698953.1	identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765
NP_698954.1	identified by match to protein family HMM PF02639
NP_698956.1	catalyzes the formation of arginine from (N-L-arginino)succinate
NP_698958.1	identified by match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01048
NP_698959.1	identified by similarity to GP:15075674
NP_698960.1	Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively
NP_698961.1	identified by similarity to GP:15075687
NP_698962.1	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis
NP_698963.1	dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate
NP_698964.1	identified by similarity to OMNI:NTL02ML2723
NP_698966.1	identified by similarity to SP:P39163; match to protein family HMM PF04752
NP_698967.1	identified by similarity to EGAD:140445; match to protein family HMM PF02325
NP_698968.1	catalyzes the hydrolysis of pyrophosphate to phosphate
NP_698969.1	identified by match to protein family HMM PF01553
NP_698970.1	identified by similarity to GP:15075681
NP_698971.1	identified by similarity to OMNI:NTL02ML2714
NP_698972.1	identified by similarity to EGAD:7038; match to protein family HMM PF00005
NP_698976.1	porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure
NP_698978.1	identified by similarity to GP:15157980
NP_698979.1	identified by similarity to OMNI:NTL02ML3264; match to protein family HMM PF03372; match to protein family HMM TIGR00633
NP_698980.1	identified by match to protein family HMM PF00027
NP_698981.1	identified by similarity to OMNI:NTL02ML3262; match to protein family HMM PF00072; match to protein family HMM PF00486
NP_698982.1	identified by similarity to GP:14024337
NP_698988.1	identified by similarity to GP:15162141; match to protein family HMM PF03797; match to protein family HMM TIGR01414; match to protein family HMM TIGR01612
NP_698989.1	identified by similarity to GP:15075693; match to protein family HMM PF02592; match to protein family HMM TIGR00697
NP_698990.1	required for 70S ribosome assembly
NP_698991.1	identified by similarity to OMNI:NTL02ML2738
NP_698992.1	identified by match to protein family HMM PF00376
NP_698993.1	identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525
NP_698994.1	identified by similarity to GP:15141324
NP_698996.1	identified by similarity to SP:P29934; match to protein family HMM TIGR01651
NP_698997.1	identified by similarity to SP:P29933; match to protein family HMM TIGR01650
NP_698999.1	identified by match to protein family HMM PF00226
NP_699001.1	identified by similarity to SP:P15298; match to protein family HMM PF01722
NP_699002.1	identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471
NP_699003.1	catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis
NP_699004.1	catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis
NP_699006.1	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs
NP_699007.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein
NP_699008.1	identified by similarity to GP:15159690
NP_699009.1	identified by similarity to GP:15075708; match to protein family HMM PF01206
NP_699010.1	identified by match to protein family HMM PF02492
NP_699011.1	identified by match to protein family HMM PF00768
NP_699012.1	identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891
NP_699014.1	identified by similarity to EGAD:23256; match to protein family HMM PF00106
NP_699015.1	identified by similarity to GP:15157579; match to protein family HMM PF04828
NP_699016.1	identified by similarity to OMNI:NTL03PA01934
NP_699017.1	identified by similarity to EGAD:149670; match to protein family HMM PF00732; match to protein family HMM PF05199
NP_699018.1	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
NP_699020.1	identified by similarity to EGAD:149672; match to protein family HMM PF00171
NP_699021.1	identified by match to protein family HMM PF00378
NP_699022.1	identified by match to protein family HMM PF01144
NP_699023.1	identified by match to protein family HMM PF01408; match to protein family HMM PF02894
NP_699024.1	identified by match to protein family HMM PF00356; match to protein family HMM PF00532
NP_699025.1	identified by similarity to GP:15076333
NP_699026.1	identified by match to protein family HMM PF00296
NP_699028.1	identified by similarity to GP:15076239; match to protein family HMM PF04392
NP_699030.1	identified by match to protein family HMM PF02653
NP_699031.1	identified by match to protein family HMM PF00005
NP_699032.1	required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA
NP_699033.1	identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180
NP_699034.1	identified by similarity to SP:O05189; match to protein family HMM PF00991
NP_699035.1	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA
NP_699036.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
NP_699037.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
NP_699038.1	identified by similarity to GP:14024528; match to protein family HMM PF03190
NP_699039.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
NP_699040.1	identified by similarity to OMNI:NTL02ML3455; match to protein family HMM PF03653; match to protein family HMM TIGR00701
NP_699041.1	catalyzes the formation of coproporphyrinogen from uroporphyrinogen III
NP_699042.1	identified by similarity to GP:14024532; match to protein family HMM PF03618
NP_699043.1	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell
NP_699044.1	AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate
NP_699045.1	catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis
NP_699046.1	3'-5' exonuclease of DNA polymerase III
NP_699047.1	molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA
NP_699048.1	F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein
NP_699049.1	identified by similarity to GP:15154866
NP_699050.1	identified by match to protein family HMM PF03562
NP_699051.1	identified by match to protein family HMM PF01713
NP_699052.1	identified by similarity to GP:15154869; match to protein family HMM PF01381
NP_699053.1	identified by similarity to GP:15154911
NP_699054.1	heat shock protein involved in degradation of misfolded proteins
NP_699055.1	heat shock protein involved in degradation of misfolded proteins
NP_699056.1	catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis
NP_699057.1	identified by similarity to GP:15072982
NP_699058.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
NP_699059.1	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide
NP_699060.1	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase
NP_699061.1	catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis
NP_699062.1	catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis
NP_699063.1	identified by match to protein family HMM PF00472
NP_699064.1	PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP
NP_699065.1	identified by similarity to GP:2947107; match to protein family HMM PF00072; match to protein family HMM PF00486
NP_699066.1	identified by similarity to GP:2947211; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518
NP_699067.1	identified by similarity to GP:14024999
NP_699069.1	identified by similarity to EGAD:7066; match to protein family HMM PF03610
NP_699070.1	identified by similarity to SP:P08877; match to protein family HMM PF00381; match to protein family HMM TIGR01003
NP_699072.1	catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine
NP_699074.1	identified by match to protein family HMM PF00512; match to protein family HMM PF02518
NP_699075.1	identified by similarity to OMNI:NTL02ML3919; match to protein family HMM PF02367; match to protein family HMM TIGR00150
NP_699076.1	identified by similarity to GP:14024993; match to protein family HMM PF00483
NP_699077.1	identified by similarity to OMNI:NTL02ML3917
NP_699078.1	identified by similarity to OMNI:CC3538; match to protein family HMM PF00580
NP_699080.1	identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068
NP_699081.1	identified by match to protein family HMM TIGR01499
NP_699082.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits
NP_699083.1	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis
NP_699085.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
NP_699086.1	catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis
NP_699087.1	identified by similarity to OMNI:VC1698
NP_699088.1	identified by similarity to GP:15154876; match to protein family HMM PF01863
NP_699089.1	identified by similarity to GP:15072953
NP_699090.1	identified by match to protein family HMM PF03594; match to protein family HMM TIGR00843
NP_699091.1	identified by similarity to OMNI:NTL02ML3900
NP_699092.1	IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits
NP_699093.1	identified by similarity to EGAD:42737
NP_699094.1	identified by similarity to SP:P55874; match to protein family HMM PF01632; match to protein family HMM TIGR00001
NP_699095.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
NP_699096.1	identified by similarity to GP:15155150
NP_699097.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
NP_699098.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily
NP_699099.1	identified by match to protein family HMM PF01408; match to protein family HMM PF02894
NP_699100.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
NP_699101.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
NP_699102.1	identified by similarity to GP:9966391
NP_699103.1	OMP decarboxylase; OMPDCase; OMPdecase; type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase
NP_699104.1	identified by similarity to GP:15155195
NP_699105.1	identified by similarity to OMNI:NTL02ML3653; match to protein family HMM PF03758
NP_699106.1	catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione
NP_699107.1	identified by match to protein family HMM PF01078; match to protein family HMM TIGR00368
NP_699108.1	identified by similarity to GP:15074346
NP_699110.1	identified by match to protein family HMM PF03330; match to protein family HMM TIGR00413
NP_699112.1	identified by similarity to EGAD:35582
NP_699114.1	identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138
NP_699115.1	identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974
NP_699116.1	ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation
NP_699117.1	identified by similarity to EGAD:14202; match to protein family HMM PF01895; match to protein family HMM TIGR02135
NP_699118.1	identified by similarity to EGAD:5895; match to protein family HMM PF00072; match to protein family HMM PF00486; match to protein family HMM TIGR02154
NP_699120.1	identified by similarity to OMNI:NTL02ML4270
NP_699121.1	identified by similarity to GP:15155785
NP_699123.1	identified by similarity to SP:Q9X4A7; match to protein family HMM PF02073
NP_699124.1	binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage
NP_699125.1	identified by match to protein family HMM PF00814
NP_699126.1	identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575
NP_699127.1	identified by match to protein family HMM PF01553
NP_699128.1	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)
NP_699130.1	identified by match to protein family HMM PF02562
NP_699131.1	identified by similarity to OMNI:NTL02ML4294; match to protein family HMM PF02130; match to protein family HMM TIGR00043
NP_699132.1	identified by similarity to OMNI:VC0959; match to protein family HMM PF00571; match to protein family HMM PF03471
NP_699133.1	Transfers the fatty acyl group on membrane lipoproteins
NP_699134.1	identified by match to protein family HMM PF01381
NP_699135.1	methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
NP_699136.1	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine
NP_699137.1	in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins
NP_699138.1	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination
NP_699139.1	identified by similarity to GP:15073167; match to protein family HMM PF04296
NP_699140.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
NP_699141.1	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock
YP_089635.1	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs
NP_699142.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
NP_699143.1	identified by similarity to SP:P05055; match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726
NP_699144.1	identified by match to protein family HMM PF05175
NP_699145.1	Catalyzes a key regulatory step in fatty acid biosynthesis
NP_699146.1	FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
NP_699147.1	catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP
NP_699148.1	identified by match to protein family HMM PF01475
NP_699149.1	identified by match to protein family HMM PF03180; match to protein family HMM TIGR00363
NP_699150.1	identified by similarity to GP:14025396
NP_699151.1	Involved in the metabolism of aromatic amino acids
NP_699153.1	identified by match to protein family HMM PF00877
NP_699154.1	identified by similarity to GP:15073078
NP_699155.1	identified by match to protein family HMM PF00883
NP_699156.1	identified by similarity to OMNI:CC2948
NP_699157.1	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases
NP_699158.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_699159.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase
NP_699208.1	identified by match to PFAM protein family HMM PF03428
NP_699212.1	similar to GB:M77016, SP:P28289, PID:339948, GB:M77016, SP:P28289, and PID:339948; identified by sequence similarity
NP_699213.1	identified by match to PFAM protein family HMM PF01156
NP_699214.1	identified by match to TIGR protein family HMM TIGR00023
NP_699215.1	similar to GP:13022200, and GP:17134506; identified by sequence similarity
NP_699216.1	similar to GP:13162075, GB:X52974, SP:P40598, and PID:48736; identified by sequence similarity
NP_699217.1	similar to GP:11065692; identified by sequence similarity
NP_699218.1	similar to GP:15141208, and GP:15141208; identified by sequence similarity
NP_699219.1	similar to GP:15158815, and GP:6018425; identified by sequence similarity
NP_699220.1	catalyzes the formation of 2,3-dihydroxybenzoate from 2,3-dihydro-2,3-dihydroxybenzoate; involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin
NP_699221.1	identified by match to PFAM protein family HMM PF00550
NP_699222.1	bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate
NP_699223.1	synthesizes isochorismate acid from chorismate
NP_699224.1	similar to GP:13959028, and GP:1778502; identified by sequence similarity
NP_699225.1	identified by match to PFAM protein family HMM PF00174
NP_699226.1	identified by match to PFAM protein family HMM PF01292
NP_699227.1	similar to GP:15157425, and GP:15157425; identified by sequence similarity
NP_699228.1	similar to GP:15157424; identified by sequence similarity
NP_699229.1	similar to GP:15157423, and GP:15157423; identified by sequence similarity
NP_699230.1	similar to GP:14523197; identified by sequence similarity
NP_699231.1	similar to GB:Z11566, GB:J04991, GB:X53305, GB:M31303, GB:D28428, GB:X94912, SP:P16949, PID:1246757, PID:189388, PID:189426, PID:35595, and PID:57870; identified by sequence similarity
NP_699232.1	similar to GP:15076000; identified by sequence similarity
NP_699233.1	similar to GB:M93015, SP:P29916, and PID:150623; identified by sequence similarity
NP_699234.1	similar to GP:15159144; identified by sequence similarity
NP_699235.1	similar to GB:M93015, SP:P29916, and PID:150623; identified by sequence similarity
NP_699236.1	identified by match to PFAM protein family HMM PF00903
NP_699237.1	similar to GB:L13289, SP:P47721, PID:551904, GB:M11147, GB:M10119, GB:M12938, GB:X03742, GB:X03743, SP:P02792, PID:1340145, PID:1340146, PID:182514, PID:182516, PID:182518, PID:2230869, and PID:28519; identified by sequence similarity
NP_699238.1	identified by match to TIGR protein family HMM TIGR01500
NP_699239.1	similar to SP:P27746, GB:X52592, and PID:46994; identified by sequence similarity
NP_699240.1	identified by match to TIGR protein family HMM TIGR01348
NP_699241.1	identified by match to TIGR protein family HMM TIGR00507
NP_699244.1	similar to GP:397973; identified by sequence similarity
NP_699247.1	similar to GB:L33799, and PID:642908; identified by sequence similarity
NP_699248.1	similar to GB:M57423, SP:P09329, SP:P11908, SP:P21108, PID:190522, and PID:2160401; identified by sequence similarity
NP_699249.1	similar to GB:L22075, SP:Q14344, and PID:404722; identified by sequence similarity
NP_699250.1	identified by match to PFAM protein family HMM PF00072
NP_699252.1	identified by match to TIGR protein family HMM TIGR01330
NP_699253.1	similar to GB:X15949, SP:P14316, and PID:33967; identified by sequence similarity
NP_699258.1	similar to GB:X01703, GB:K00557, SP:P04687, SP:P05215, PID:340019, PID:340021, and PID:37492; identified by sequence similarity
NP_699261.1	similar to SP:P04993, GB:X04581, GB:X04582, PID:42683, PID:42691, PID:882711, GB:U00096, and PID:1789182; identified by sequence similarity
NP_699262.1	glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate
NP_699263.1	similar to SP:O06005, GB:M86808, SP:P29803, and PID:190790; identified by sequence similarity
NP_699264.1	similar to GP:15075833; identified by sequence similarity
NP_699265.1	identified by match to PFAM protein family HMM PF00691
NP_699266.1	similar to GP:5929876, and GP:8163894; identified by sequence similarity
NP_699267.1	similar to GP:5929875, and GP:5929875; identified by sequence similarity
NP_699268.1	similar to GP:5929874, and GP:5929874; identified by sequence similarity
NP_699269.1	similar to GP:5929873, and GP:5929873; identified by sequence similarity
NP_699270.1	similar to GP:5929872; identified by sequence similarity
NP_699271.1	similar to GP:8163889, and GP:8163889; identified by sequence similarity
NP_699272.1	similar to GP:5929870, and GP:5929870; identified by sequence similarity
NP_699273.1	similar to GP:8163887, and GP:8163887; identified by sequence similarity
NP_699274.1	similar to GP:5929868, and GP:5929868; identified by sequence similarity
NP_699275.1	similar to GP:5929867, and GP:5929867; identified by sequence similarity
NP_699276.1	similar to GP:5929866, and GP:5929866; identified by sequence similarity
NP_699277.1	identified by match to PFAM protein family HMM PF01471
NP_699278.1	identified by match to TIGR protein family HMM TIGR01208
NP_699279.1	similar to GP:14023404; identified by sequence similarity
NP_699280.1	similar to GP:15159530; identified by sequence similarity
NP_699282.1	similar to GP:15159532; identified by sequence similarity
NP_699283.1	protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic
NP_699284.1	similar to GP:13877130, and GP:13877130; identified by sequence similarity
NP_699285.1	similar to GP:2276407; identified by sequence similarity
NP_699286.1	similar to GP:14023390, and GP:14023390; identified by sequence similarity
NP_699287.1	catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine
NP_699288.1	identified by match to PFAM protein family HMM PF01432
NP_699289.1	similar to GP:15159542; identified by sequence similarity
NP_699290.1	similar to GP:14023385; identified by sequence similarity
NP_699291.1	identified by match to PFAM protein family HMM PF00581
NP_699293.1	similar to GP:15157753; identified by sequence similarity
NP_699294.1	part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE
NP_699295.1	similar to SP:P09833; identified by sequence similarity
NP_699296.1	identified by match to PFAM protein family HMM PF00583
NP_699300.1	identified by match to TIGR protein family HMM TIGR01598
NP_699301.1	identified by match to PFAM protein family HMM PF03741
NP_699302.1	similar to GP:15158721; identified by sequence similarity
NP_699303.1	identified by match to PFAM protein family HMM PF02492
NP_699304.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
NP_699305.1	similar to SP:O50657; identified by sequence similarity
NP_699306.1	similar to GP:15141223; identified by sequence similarity
NP_699308.1	similar to GP:14026189; identified by sequence similarity
NP_699309.1	identified by match to PFAM protein family HMM PF03808
NP_699312.1	identified by match to PFAM protein family HMM PF00535
NP_699314.1	similar to GP:15076091; identified by sequence similarity
NP_699315.1	similar to GP:6469270; identified by sequence similarity
NP_699316.1	catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate
NP_699317.1	similar to GP:15157291; identified by sequence similarity
NP_699318.1	similar to GP:15075242, and GP:17740614; identified by sequence similarity
NP_699319.1	similar to GP:15075241, and GP:17740613; identified by sequence similarity
NP_699320.1	similar to GP:15075240; identified by sequence similarity
NP_699321.1	identified by match to PFAM protein family HMM PF04039
NP_699322.1	identified by match to PFAM protein family HMM PF00440
NP_699323.1	similar to GP:9622950; identified by sequence similarity
NP_699324.1	similar to GP:15073579, and GP:15073579; identified by sequence similarity
NP_699325.1	membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export
NP_699326.1	identified by match to PFAM protein family HMM PF01052
NP_699328.1	similar to SP:O54246; identified by sequence similarity
NP_699329.1	With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine
NP_699330.1	similar to GP:15155497, and GP:15073585; identified by sequence similarity
NP_699331.1	FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
NP_699332.1	involved in type III protein export during flagellum assembly
NP_699333.1	similar to GP:2916792, and GP:2459710; identified by sequence similarity
NP_699334.1	identified by match to PFAM protein family HMM PF01569
NP_699337.1	identified by match to PFAM protein family HMM PF03751
NP_699338.1	similar to GB:Z17227, SP:Q08334, PID:393379, and PID:571296; identified by sequence similarity
NP_699339.1	identified by match to PFAM protein family HMM PF03633
NP_699340.1	similar to GP:4433524; identified by sequence similarity
NP_699342.1	similar to GP:15159134; identified by sequence similarity
NP_699344.1	identified by match to PFAM protein family HMM PF01527
NP_699346.1	similar to GP:5281442, GB:U12431, SP:P26378, PID:521144, and PID:905387; identified by sequence similarity
NP_699347.1	identified by match to TIGR protein family HMM TIGR00760
NP_699348.1	similar to GB:M31651, GB:M27542, GB:X16351, GB:X05403, GB:X05792, GB:X16349, GB:X16350, SP:P04278, SP:P14689, PID:1335305, PID:36452, PID:825718, GB:M31651, GB:M27542, GB:X16351, GB:X05403, GB:X05792, GB:X16349, GB:X16350, SP:P04278, SP:P14689, PID:1335305, PID:36452, and PID:825718; identified by sequence similarity
NP_699349.1	similar to GB:J00222, GB:S55273, SP:P01854, PID:184760, PID:2300106, and PID:386807; identified by sequence similarity
NP_699350.1	similar to GP:10197687, GB:J03799, GB:X15005, GB:S37431, GB:M14199, GB:X61156, GB:U36484, SP:P08865, PID:1125065, PID:34272, and PID:386857; identified by sequence similarity
NP_699351.1	similar to GB:J00222, GB:S55273, SP:P01854, PID:184760, PID:2300106, and PID:386807; identified by sequence similarity
NP_699353.1	with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the proteins in this cluster are associated with the thin flagella
NP_699354.1	with FlgF and B makes up the proximal portion of the flagellar basal body rod
NP_699355.1	forms a junction between the M-ring and FlgB during flagella biosynthesis; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
NP_699356.1	makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella
NP_699357.1	required for the assembly of the flagellar basal body P-ring; Bradyrhizobium japonicum has two types of flagella, a single thick flagella and a few thin flagella; the protein in this cluster is associated with the thin flagella
NP_699358.2	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum
NP_699359.1	similar to GP:12057224; identified by sequence similarity
NP_699360.1	part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod
NP_699361.1	similar to GP:15073597, GB:X56253, GB:X56254, GB:X56255, GB:X56256, GB:X56257, GB:M16985, SP:P20645, PID:307147, and PID:825692; identified by sequence similarity
NP_699362.1	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus
NP_699364.1	similar to GP:15130936; identified by sequence similarity
NP_699365.1	similar to GP:3419687; identified by sequence similarity
NP_699368.1	identified by match to PFAM protein family HMM PF02515
NP_699369.1	identified by match to PFAM protein family HMM PF01524
NP_699370.1	identified by match to PFAM protein family HMM PF03328
NP_699372.1	similar to GB:L25675, PID:409767, and SP:P53641; identified by sequence similarity
NP_699375.1	similar to GP:15162141, and GP:15162141; identified by sequence similarity
NP_699376.1	similar to GB:L11566, SP:Q07020, PID:337493, GB:L11566, SP:Q07020, and PID:337493; identified by sequence similarity
NP_699379.1	similar to GP:15073704; identified by sequence similarity
NP_699380.1	similar to GP:15073706; identified by sequence similarity
NP_699382.1	similar to SP:P32718, PID:396419, GB:U00096, and PID:1790522; identified by sequence similarity
NP_699383.1	similar to GP:14026515, and SP:P52073; identified by sequence similarity
NP_699384.1	similar to SP:P52074; identified by sequence similarity
NP_699385.1	similar to GP:4007669; identified by sequence similarity
NP_699386.1	similar to GP:15155625, and GP:15073711; identified by sequence similarity
NP_699387.1	identified by match to TIGR protein family HMM TIGR00624
NP_699388.1	identified by match to TIGR protein family HMM TIGR00948
NP_699389.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
NP_699390.1	May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
NP_699391.1	short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ
NP_699393.1	class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle
NP_699396.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth
NP_699397.1	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring
NP_699400.1	identified by match to TIGR protein family HMM TIGR01668
NP_699402.1	catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities
NP_699403.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase; some organisms carry two different copies of this enzyme
NP_699404.1	similar to GP:15073729; identified by sequence similarity
NP_699405.1	similar to SP:P08732; identified by sequence similarity
NP_699406.1	similar to GP:15155649; identified by sequence similarity
NP_699407.1	identified by match to PFAM protein family HMM PF03602
NP_699408.1	identified by match to PFAM protein family HMM PF01734
NP_699409.1	similar to GP:15073737; identified by sequence similarity
NP_699410.1	similar to GB:V00566, GB:J00299, GB:M29386, GB:D00411, SP:P01236, GB:U75583, PID:1620399, PID:1658518, PID:190354, PID:190356, PID:220018, PID:34211, PID:531101, and PID:531103; identified by sequence similarity
NP_699411.1	identified by match to TIGR protein family HMM TIGR01330
NP_699412.1	similar to GP:15155658, and GP:15073740; identified by sequence similarity
NP_699413.1	similar to GP:14027592; identified by sequence similarity
NP_699414.1	catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A
NP_699415.1	transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate
NP_699416.1	similar to GP:15073746; identified by sequence similarity
NP_699417.1	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NP_699418.1	similar to GB:Z25795, SP:P39118, PID:397488, PID:2293136, GB:AL009126, GB:Z25795, SP:P39118, PID:397488, PID:2293136, and GB:AL009126; identified by sequence similarity
NP_699419.1	similar to SP:P45857; identified by sequence similarity
NP_699420.1	identified by match to PFAM protein family HMM PF01614
NP_699421.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_699422.1	converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation
NP_699423.1	similar to GP:14587414; identified by sequence similarity
NP_699424.1	identified by match to PFAM protein family HMM PF00376
NP_699425.1	identified by match to TIGR protein family HMM TIGR01382
NP_699426.1	similar to GP:15159266; identified by sequence similarity
NP_699430.1	identified by match to PFAM protein family HMM PF03929
NP_699431.1	similar to SP:P41780; identified by sequence similarity
NP_699432.1	similar to GP:15073890; identified by sequence similarity
NP_699433.1	similar to GP:15159282; identified by sequence similarity
NP_699435.1	similar to GP:15140120; identified by sequence similarity
NP_699436.1	similar to GP:15140121; identified by sequence similarity
NP_699437.1	similar to GP:15140123; identified by sequence similarity
NP_699440.1	identified by match to PFAM protein family HMM PF03772
NP_699441.1	similar to GP:6978955; identified by sequence similarity
NP_699442.1	similar to GP:6978956, and GP:6978956; identified by sequence similarity
NP_699443.1	similar to GP:6978957; identified by sequence similarity
NP_699444.1	similar to GP:6978958, and GP:6978958; identified by sequence similarity
NP_699445.1	similar to GP:6978959, and SP:Q51662; identified by sequence similarity
NP_699446.1	similar to GP:6978960, and SP:P98008; identified by sequence similarity
NP_699447.1	similar to GP:6978961, GB:U10072, SP:P98177, and PID:501087; identified by sequence similarity
NP_699448.1	similar to GP:6978962, GB:K00396, GB:M10065, GB:M12529, GB:X00199, GB:Z70760, GB:X92000, SP:P02649, PID:1263123, PID:178849, PID:178851, PID:178853, PID:579590, and PID:929610; identified by sequence similarity
NP_699449.1	similar to GP:14523804; identified by sequence similarity
NP_699450.1	similar to GP:14523803, and GP:14523803; identified by sequence similarity
NP_699451.1	similar to GP:14523802, and GP:14523802; identified by sequence similarity
NP_699452.1	similar to GP:14523801, and GP:14523801; identified by sequence similarity
NP_699453.1	similar to GP:15156967, and GP:15156967; identified by sequence similarity
NP_699454.1	similar to GP:15074522, and GP:15074522; identified by sequence similarity
NP_699455.1	identified by match to TIGR protein family HMM TIGR01409
NP_699457.1	similar to GB:J05016, SP:P13667, PID:181508, GB:J05016, SP:P13667, and PID:181508; identified by sequence similarity
NP_699458.1	similar to GP:14523796, and GP:2773329; identified by sequence similarity
NP_699459.1	similar to GP:6978954; identified by sequence similarity
NP_699460.1	similar to GP:15140338; identified by sequence similarity
NP_699462.1	similar to GP:2661681; identified by sequence similarity
NP_699463.1	similar to GP:2661682, and GP:12659326; identified by sequence similarity
NP_699464.1	similar to GP:2661683, and GP:2661683; identified by sequence similarity
NP_699465.1	similar to GP:11036625, GB:M57506, GB:M57502, SP:P22362, PID:184506, and PID:339729; identified by sequence similarity
NP_699466.1	similar to GP:15158921; identified by sequence similarity
NP_699467.1	similar to GP:15158337, and GP:15158337; identified by sequence similarity
NP_699468.1	similar to SP:P08500, GB:M18576, PID:551957, PID:581499, SP:P08500, GB:M18576, PID:551957, and PID:581499; identified by sequence similarity
NP_699470.1	similar to GP:14523755; identified by sequence similarity
NP_699471.1	reduces nitrous oxide to nitrogen
NP_699472.1	similar to SP:P19843, GB:X04803, SP:P02248, PID:1304128, PID:1490419, PID:340058, PID:340068, and PID:825728; identified by sequence similarity
NP_699473.1	similar to SP:P19844, GB:X04803, SP:P02248, PID:1304128, PID:1490419, PID:340058, PID:340068, and PID:825728; identified by sequence similarity
NP_699474.1	similar to GP:2177176, GB:L06175, and PID:189449; identified by sequence similarity
NP_699475.1	similar to GP:2177177; identified by sequence similarity
NP_699476.1	similar to GP:14523761, and GP:2177178; identified by sequence similarity
NP_699477.1	similar to GP:15158856, GB:L06214, PID:153222, and PID:886941; identified by sequence similarity
NP_699478.1	similar to GP:15158853, and GP:14523798; identified by sequence similarity
NP_699480.1	similar to GP:15158995; identified by sequence similarity
NP_699481.1	identified by match to TIGR protein family HMM TIGR00972
NP_699484.1	similar to GP:15158836; identified by sequence similarity
NP_699485.1	similar to GP:15158837; identified by sequence similarity
NP_699486.1	similar to GP:15158838, and GP:15158838; identified by sequence similarity
NP_699487.1	similar to GP:14523816; identified by sequence similarity
NP_699488.1	catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate
NP_699491.1	similar to GB:M64929, SP:Q00005, SP:Q00007, and PID:190422; identified by sequence similarity
NP_699492.1	similar to GP:11344603, GB:L08239, and PID:950412; identified by sequence similarity
NP_699493.1	similar to GB:D90359, GB:M73442, GB:M73444, GB:X07024, SP:P21675, and PID:29733; identified by sequence similarity
NP_699494.1	similar to SP:P09152; identified by sequence similarity
NP_699495.1	similar to GP:14348603; identified by sequence similarity
NP_699496.1	upregulated by FixLJ/FixK under oxygen limitation; involved in regulation of genes involved in carbon and amino acid metabolism
NP_699497.1	similar to GP:5802909; identified by sequence similarity
NP_699499.1	similar to GP:5802910, and GP:2828820; identified by sequence similarity
NP_699500.1	similar to GP:5802911, and GP:2828821; identified by sequence similarity
NP_699501.1	similar to GP:5802912, and GP:13517311; identified by sequence similarity
NP_699502.1	similar to GP:5802913; identified by sequence similarity
NP_699503.1	similar to GP:5802914; identified by sequence similarity
NP_699504.1	similar to GP:5802915; identified by sequence similarity
NP_699506.1	similar to GP:15073164, and GP:12055084; identified by sequence similarity
NP_699509.1	similar to GP:1800061; identified by sequence similarity
NP_699510.1	in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF
NP_699511.1	Catalyzes the rate-limiting step in dNTP synthesis
NP_699512.1	B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE
NP_699516.1	blocks the formation of polar Z-ring septums
NP_699517.1	similar to GP:15160138, and SP:P18197; identified by sequence similarity
NP_699518.1	works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell
NP_699520.1	similar to GP:15159179, and GP:15159179; identified by sequence similarity
NP_699521.1	similar to GP:14524112, and GP:17428750; identified by sequence similarity
NP_699522.1	similar to GP:14524111; identified by sequence similarity
NP_699523.1	similar to GP:14524110, and SP:P23860; identified by sequence similarity
NP_699524.1	similar to GP:14524109, GB:X59932, SP:P41240, PID:30256, and PID:30315; identified by sequence similarity
NP_699529.1	similar to GP:15141215; identified by sequence similarity
NP_699530.1	similar to GP:14524048; identified by sequence similarity
NP_699533.1	catalyzes the formation of glutamate from glutamine
NP_699534.1	inactive form
NP_699537.1	similar to SP:P77473; identified by sequence similarity
NP_699539.1	identified by match to PFAM protein family HMM PF03466
NP_699540.1	similar to GP:3510759; identified by sequence similarity
NP_699541.1	similar to GP:2738951, SP:P06187, GB:K03551, GB:X52093, PID:154137, and PID:47739; identified by sequence similarity
NP_699542.1	similar to GP:7799513, and GP:7799513; identified by sequence similarity
NP_699543.1	identified by match to PFAM protein family HMM PF03595
NP_699545.1	catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate
NP_699546.1	similar to GP:15140396; identified by sequence similarity
NP_699547.1	similar to GP:4098965, and GP:4098965; identified by sequence similarity
NP_699548.1	similar to SP:Q59170, GB:L08666, SP:P45880, PID:190200, and PID:190201; identified by sequence similarity
NP_699549.1	similar to GP:9082308; identified by sequence similarity
NP_699550.1	identified by match to PFAM protein family HMM PF02600
NP_699551.1	identified by match to TIGR protein family HMM TIGR00563
NP_699552.1	identified by match to PFAM protein family HMM PF02584
NP_699553.1	Enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine
NP_699554.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
NP_699555.1	identified by match to PFAM protein family HMM PF00589
NP_699556.1	similar to SP:P37447, GB:X76902, and PID:436890; identified by sequence similarity
NP_699557.1	similar to GP:8117186, and GP:8117186; identified by sequence similarity
NP_699559.1	similar to GB:X72841, SP:P31149, SP:Q09028, SP:Q16576, PID:1016273, and PID:297904; identified by sequence similarity
NP_699561.1	similar to SP:P03833, GB:X01007, GB:X13109, GB:X16345, GB:Y00525, PID:43821, SP:P03833, GB:X01007, GB:X13109, GB:X16345, GB:Y00525, and PID:43821; identified by sequence similarity
NP_699564.1	similar to GP:14523605, GB:L33243, GB:L43601, GB:L43602, GB:L43604, GB:L43605, GB:L43610, GB:L43617, GB:L43618, SP:P98161, PID:799335, PID:903758, and PID:904223; identified by sequence similarity
NP_699565.1	similar to SP:P17909; identified by sequence similarity
NP_699566.1	similar to GB:X62949, GB:L35249, SP:P15313, SP:P21281, PID:179563, PID:37794, PID:522193, PID:587442, GB:X62949, GB:L35249, SP:P15313, SP:P21281, PID:179563, PID:37794, PID:522193, and PID:587442; identified by sequence similarity
NP_699570.1	identified by match to TIGR protein family HMM TIGR00634
NP_699572.1	similar to GB:M23326, GB:X15261, GB:X13954, PID:1049195, PID:2358067, PID:312412, PID:37046, PID:37048, PID:37298, PID:37324, and PID:540457; identified by sequence similarity
NP_699574.1	similar to GB:D14695, and PID:285961; identified by sequence similarity
NP_699575.1	similar to GB:M20730, SP:P16534, GB:M24197, PID:150496, and PID:150515; identified by sequence similarity
NP_699576.1	similar to GP:6469262, and GP:6469262; identified by sequence similarity
NP_699577.1	similar to SP:P35097, and GB:Z47792; identified by sequence similarity
NP_699578.1	similar to SP:Q9AEM9; identified by sequence similarity
NP_699579.1	Enables the production of acetyl-CoA by phosphorylating acetate in the presence of ATP and a divalent cation
NP_699581.1	identified by match to PFAM protein family HMM PF00067
NP_699582.1	similar to GP:14524114; identified by sequence similarity
NP_699584.1	identified by match to TIGR protein family HMM TIGR00692
NP_699585.1	similar to SP:P04816, GB:L19201, SP:P32174, PID:304996, GB:U00096, and PID:1790325; identified by sequence similarity
NP_699586.1	similar to GP:19715091; identified by sequence similarity
NP_699587.1	similar to SP:P22731; identified by sequence similarity
NP_699588.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
NP_699589.1	identified by match to PFAM protein family HMM PF00745
NP_699590.1	identified by match to PFAM protein family HMM PF00070
NP_699591.1	similar to GP:15159844; identified by sequence similarity
NP_699592.1	similar to SP:P02917, GB:L19201, SP:P32174, PID:304996, GB:U00096, and PID:1790325; identified by sequence similarity
NP_699593.1	similar to GP:15075876; identified by sequence similarity
NP_699594.1	similar to SP:P49307; identified by sequence similarity
NP_699595.1	identified by match to PFAM protein family HMM PF01408
NP_699596.1	similar to SP:P24137, GB:M88627, SP:P43334, and PID:476741; identified by sequence similarity
NP_699597.1	similar to GB:M88627, SP:P43334, and PID:476741; identified by sequence similarity
NP_699598.1	similar to GP:12541464; identified by sequence similarity
NP_699599.1	similar to GP:15160372; identified by sequence similarity
NP_699600.1	similar to GB:X07820, SP:P09238, and PID:36629; identified by sequence similarity
NP_699601.1	similar to GP:15158790, and GP:6969001; identified by sequence similarity
NP_699602.1	identified by match to PFAM protein family HMM PF00392
NP_699603.1	identified by match to PFAM protein family HMM PF00218
NP_699605.1	similar to GP:5478244, and GP:5478244; identified by sequence similarity
NP_699606.1	similar to GP:5478243, and GP:5478243; identified by sequence similarity
NP_699607.1	similar to GP:5478242, and GP:5478242; identified by sequence similarity
NP_699608.1	similar to GP:5478241, GP:5478241, GB:M83667, SP:P49716, and PID:189176; identified by sequence similarity
NP_699609.1	similar to GP:5478240; identified by sequence similarity
NP_699610.1	similar to GP:5478239, and SP:P15527; identified by sequence similarity
NP_699611.1	similar to GP:5478237, and GP:5478237; identified by sequence similarity
NP_699612.1	similar to GP:5478236, and GP:5478236; identified by sequence similarity
NP_699613.1	similar to GB:X70959, SP:P42459, PID:452384, GB:X70959, SP:P42459, and PID:452384; identified by sequence similarity
NP_699614.1	similar to GP:5478235; identified by sequence similarity
NP_699615.1	similar to GP:5478233, and GP:5478233; identified by sequence similarity
NP_699616.1	similar to GP:5478232; identified by sequence similarity
NP_699617.1	similar to GP:15158359, GB:J00109, GB:K03512, GB:M28637, GB:A15601, GB:K03513, GB:A11954, GB:X15943, SP:P01258, SP:P06881, PID:1340176, PID:179799, PID:179828, PID:180466, PID:296638, and PID:457134; identified by sequence similarity
NP_699618.1	similar to GP:15158365; identified by sequence similarity
NP_699619.1	similar to GP:15158366; identified by sequence similarity
NP_699620.1	similar to GP:15158364, and GP:15158364; identified by sequence similarity
NP_699621.1	similar to GP:15158361; identified by sequence similarity
NP_699622.1	catalyzes the formation of 5-aminovulinate from (S)-4-amino-5-oxopentanoate
NP_699623.1	similar to GP:15158360, and GP:15158360; identified by sequence similarity
NP_699624.1	similar to GP:15158370; identified by sequence similarity
NP_699625.1	similar to GP:15158371, and GP:15158371; identified by sequence similarity
NP_699626.1	similar to SP:P29202, and PID:148782; identified by sequence similarity
NP_699627.1	similar to GP:15158375; identified by sequence similarity
NP_699628.1	similar to GP:15158376; identified by sequence similarity
NP_699629.1	similar to GP:15158377, and GP:6066675; identified by sequence similarity
NP_699631.1	similar to GP:15160336; identified by sequence similarity
NP_699632.1	similar to SP:O66131; identified by sequence similarity
NP_699633.1	identified by match to PFAM protein family HMM PF04024
NP_699634.1	similar to GP:4106617; identified by sequence similarity
NP_699635.1	this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress
NP_699636.1	similar to GP:15159873, and SP:P45857; identified by sequence similarity
NP_699637.1	similar to GB:X03342, SP:P02433, and PID:36132; identified by sequence similarity
NP_699638.1	similar to GP:9948613, GB:M29297, and SP:P20189; identified by sequence similarity
NP_699639.1	similar to GB:M25667, GB:S66533, GB:S66534, GB:S66541, SP:P17677, and PID:182970; identified by sequence similarity
NP_699640.1	similar to GP:14523919; identified by sequence similarity
NP_699642.1	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate
NP_699643.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
NP_699644.1	similar to GB:Z29635, SP:P46374, PID:455002, GB:Z29635, SP:P46374, and PID:455002; identified by sequence similarity
NP_699645.1	identified by match to PFAM protein family HMM PF01022
NP_699646.1	similar to GP:14523677, and GP:14523677; identified by sequence similarity
NP_699648.1	similar to GP:14524042; identified by sequence similarity
NP_699649.1	identified by match to PFAM protein family HMM PF01594
NP_699651.1	identified by match to PFAM protein family HMM PF03130
NP_699652.1	identified by match to TIGR protein family HMM TIGR00998
NP_699653.1	similar to GP:17427173; identified by sequence similarity
NP_699654.1	similar to GP:15158870, and GP:15074195; identified by sequence similarity
NP_699655.1	similar to GP:13021750, and SP:Q47539; identified by sequence similarity
NP_699656.1	similar to SP:P37338, GB:U00096, and PID:1789018; identified by sequence similarity
NP_699657.1	identified by match to PFAM protein family HMM PF00497
NP_699658.1	similar to GP:15074065; identified by sequence similarity
NP_699659.1	similar to GP:15156118; identified by sequence similarity
NP_699660.1	identified by match to TIGR protein family HMM TIGR01386
NP_699661.1	similar to GP:14023190; identified by sequence similarity
NP_699665.1	similar to GP:14026911; identified by sequence similarity
NP_699666.1	similar to GP:15075101; identified by sequence similarity
NP_699667.1	similar to GP:15155841; identified by sequence similarity
NP_699668.1	similar to GP:15075862; identified by sequence similarity
NP_699670.1	similar to GP:15074955; identified by sequence similarity
NP_699673.1	catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis
NP_699674.1	similar to GP:15140555; identified by sequence similarity
NP_699675.1	FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
NP_699676.1	catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate
NP_699677.1	DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium
NP_699678.1	catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine
NP_699679.1	similar to GB:L05091, GB:U58682, SP:P25112, PID:1518637, and PID:337403; identified by sequence similarity
NP_699683.1	forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis
NP_699686.1	identified by match to PFAM protein family HMM PF00070
NP_699687.1	subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+
NP_699688.1	subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali
NP_699689.1	subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone
NP_699690.1	subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali
NP_699691.1	subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport
NP_699692.1	subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali
NP_699694.1	similar to GP:15159185, GB:Z27502, GB:Z29983, SP:P04438, PID:1335182, PID:32878, PID:474960, PID:505435, and PID:563647; identified by sequence similarity
NP_699695.1	similar to GP:9858820, GB:M24400, SP:P17538, and PID:181190; identified by sequence similarity
NP_699696.1	similar to GP:9858821; identified by sequence similarity
NP_699697.1	similar to GP:9858822, and SP:P11026; identified by sequence similarity
NP_699698.1	similar to GB:X59066, GB:X65460, GB:D28126, GB:D14710, SP:P25705, PID:28938, PID:34468, PID:559317, and PID:559325; identified by sequence similarity
NP_699699.1	similar to SP:P30858, GB:X86160, PID:769790, GB:U00096, PID:1651397, and PID:1787089; identified by sequence similarity
NP_699700.1	similar to GP:15073129; identified by sequence similarity
NP_699701.1	similar to GP:15073128, and GP:15073128; identified by sequence similarity
NP_699703.1	similar to GP:15073126, and SP:Q00749; identified by sequence similarity
NP_699705.1	similar to GP:15073125, and SP:P29823; identified by sequence similarity
NP_699706.1	similar to GP:15073124; identified by sequence similarity
NP_699707.1	similar to GP:15073123; identified by sequence similarity
NP_699708.1	similar to GP:15073122, and SP:Q01937; identified by sequence similarity
NP_699711.1	similar to GP:15075957, and SP:P09060; identified by sequence similarity
NP_699712.1	identified by match to PFAM protein family HMM PF02780
NP_699713.1	Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA
NP_699714.1	E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide
NP_699715.1	identified by match to PFAM protein family HMM PF02104
NP_699717.1	similar to GB:L07807, GB:L07810, GB:L07808, GB:L07809, SP:Q05193, PID:181849, and PID:181851; identified by sequence similarity
NP_699718.1	identified by match to PFAM protein family HMM PF03576
NP_699719.1	similar to GP:15157414; identified by sequence similarity
NP_699720.1	similar to GB:J05175, SP:P16442, PID:1783208, PID:1783212, PID:1783214, PID:1783218, PID:1783226, PID:2352626, PID:340078, and PID:992596; identified by sequence similarity
NP_699721.1	similar to GP:15158999; identified by sequence similarity
NP_699722.1	similar to GP:15140749; identified by sequence similarity
NP_699723.1	similar to GP:15158997, and SP:P24138; identified by sequence similarity
NP_699724.1	similar to GP:13235555, and SP:P77348; identified by sequence similarity
NP_699725.1	similar to GP:15158996, and SP:P06202; identified by sequence similarity
NP_699727.1	similar to GP:15074850; identified by sequence similarity
NP_699729.1	similar to GP:15140313; identified by sequence similarity
NP_699730.1	similar to SP:P23157, GB:X55942, and PID:46921; identified by sequence similarity
NP_699731.1	similar to GP:15140315; identified by sequence similarity
NP_699732.1	identified by match to TIGR protein family HMM TIGR00745
NP_699733.1	similar to GP:15140316, and GP:15140316; identified by sequence similarity
NP_699734.1	similar to GP:15140317; identified by sequence similarity
NP_699735.1	similar to GP:15140318, and GP:15140318; identified by sequence similarity
NP_699736.1	similar to GP:15160059; identified by sequence similarity
NP_699737.1	identified by match to PFAM protein family HMM PF00165
NP_699738.1	similar to GB:X07282, SP:P10826, PID:184477, PID:32026, PID:35883, GB:D38554, PID:1354931, and PID:559705; identified by sequence similarity
NP_699739.1	identified by match to PFAM protein family HMM PF02566
NP_699740.1	similar to SP:P14040, GB:X15970, and PID:44784; identified by sequence similarity
NP_699741.1	similar to GP:15140549, SP:P37811, GB:Z28592, PID:433988, and GB:AL009126; identified by sequence similarity
NP_699742.1	similar to GP:15076151, SP:P37811, GB:Z28592, PID:433988, and GB:AL009126; identified by sequence similarity
NP_699743.1	similar to GP:15076150, and GP:15076150; identified by sequence similarity
NP_699745.1	identified by match to TIGR protein family HMM TIGR00011
NP_699746.1	rhizobial iron regulator; in Sinorhizobium meliloti mutations in this gene affect the expression of a number of iron-responsive operons
NP_699747.1	similar to GP:13277326, and GP:13277326; identified by sequence similarity
NP_699748.1	similar to GP:15076196; identified by sequence similarity
NP_699749.1	similar to SP:P22759; identified by sequence similarity
NP_699750.1	catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit
NP_699751.1	similar to GP:15156897; identified by sequence similarity
NP_699752.1	similar to GP:15156898; identified by sequence similarity
NP_699753.1	similar to GP:13937515; identified by sequence similarity
NP_699754.1	similar to GP:13937516; identified by sequence similarity
NP_699755.1	similar to GP:15074605; identified by sequence similarity
NP_699756.1	similar to GP:6739568; identified by sequence similarity
NP_699757.1	similar to SP:P25534; identified by sequence similarity
NP_699758.1	similar to GP:15074574; identified by sequence similarity
NP_699759.1	similar to GP:14021474; identified by sequence similarity
NP_699760.1	similar to GP:15074576; identified by sequence similarity
NP_699761.1	identified by match to PFAM protein family HMM PF03046
NP_699762.1	identified by match to PFAM protein family HMM PF00903
NP_699763.1	identified by match to TIGR protein family HMM TIGR01587
NP_699764.1	similar to GP:15074586, and GP:15074586; identified by sequence similarity
NP_699765.1	catalyzes branch migration in Holliday junction intermediates
NP_699766.1	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
NP_699767.1	forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis
NP_699768.1	similar to GP:6714962; identified by sequence similarity
NP_699769.1	similar to GP:15074112; identified by sequence similarity
NP_699770.1	similar to GP:15157711, and GP:1196970; identified by sequence similarity
NP_699771.1	similar to GP:3236220; identified by sequence similarity
NP_699772.1	identified by match to PFAM protein family HMM PF00989
NP_699773.1	lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein
NP_699774.1	similar to GP:15156645; identified by sequence similarity
NP_699775.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
NP_699778.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
NP_699779.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain
NP_699780.1	catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins
NP_699781.1	similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function
NP_699782.1	identified by match to PFAM protein family HMM PF02771
NP_699783.1	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis
NP_699784.1	Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides
NP_699785.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX
NP_699786.1	similar to GP:15156358; identified by sequence similarity
NP_699788.1	catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity
NP_699789.1	similar to SP:P21499; identified by sequence similarity
NP_699791.1	similar to GP:6525218; identified by sequence similarity
NP_699792.1	similar to GP:6525219; identified by sequence similarity
NP_699793.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif
NP_699794.1	involved in swarmer-to-stalked cell differentiation in Caulobacter crescentus; catalyzes the condensation of two GTP molecules to form the secondary messenger cyclic di-GMP (c-di-GMP); upon phosphorylation of domain D1 the protein dimerizes; presumably this allows the two GTP-bound GGDEF (diguanylate cyclase) domains to catalyze the condensation reaction; allosterically inhibited by c-di-GMP
NP_699796.1	similar to GP:6513589; identified by sequence similarity
NP_699797.1	similar to GP:15074224; identified by sequence similarity
NP_699798.1	Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation
NP_699799.1	involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function
NP_699800.1	similar to GP:15156313, and GP:15074191; identified by sequence similarity
NP_699802.1	identified by match to TIGR protein family HMM TIGR00254
NP_699805.1	similar to SP:P09795, and PID:154350; identified by sequence similarity
NP_699810.1	identified by match to TIGR protein family HMM TIGR01406
NP_699811.1	similar to GP:15074546, and GP:15074546; identified by sequence similarity
NP_699812.1	identified by match to PFAM protein family HMM PF00165
NP_699814.1	similar to GP:15073672, and SP:Q98B75; identified by sequence similarity
NP_699815.1	similar to SP:P33548, PID:155324, and PID:155328; identified by sequence similarity
NP_699816.1	similar to SP:P33548, PID:155324, and PID:155328; identified by sequence similarity
NP_699817.1	identified by match to PFAM protein family HMM PF00899
NP_699818.1	identified by match to PFAM protein family HMM PF01047
NP_699819.1	identified by match to TIGR protein family HMM TIGR01409
NP_699820.1	catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA
NP_699821.1	similar to GP:15158666, and SP:Q01104; identified by sequence similarity
NP_699822.1	similar to GP:15158667, and SP:Q01103; identified by sequence similarity
NP_699823.1	similar to GP:15141386; identified by sequence similarity
NP_699824.1	similar to GP:6682325; identified by sequence similarity
NP_699825.1	catalyzes the formation of protocatechuate from 4-hydroxybenzoate
NP_699826.1	similar to GP:15141380, GB:D21235, SP:P54725, PID:1905912, and PID:498146; identified by sequence similarity
NP_699827.1	similar to GP:15141379, and SP:P00632; identified by sequence similarity
NP_699828.1	similar to GP:15141378; identified by sequence similarity
NP_699829.1	similar to GP:11037223, and SP:P00437; identified by sequence similarity
NP_699830.1	similar to GP:11037224, GB:M12783, GB:X02811, GB:M19719, GB:X03702, GB:K01918, GB:X03493, GB:Y00389, GB:K01402, GB:X02745, GB:K01399, GB:X00560, GB:K01915, GB:K01917, GB:K01401, GB:X00562, GB:K01916, GB:K01400, GB:X00561, GB:K01913, GB:K01914, GB:J00121, GB:K01398, GB:X02744, GB:M32009, SP:P01127, PID:1335308, PID:1335309, PID:1335310, PID:1335311, PID:1621242, PID:1888419, PID:2294400, PID:2294421, PID:2294425, PID:2297379, PID:30247, PID:338199, PID:338209, PID:338211, PID:35372, PID:35375, PID:35377, PID:36481, and PID:951025; identified by sequence similarity
NP_699831.1	Catalyzes the cycloisomerization of cis,cis-muconate
NP_699832.1	similar to GP:15158698; identified by sequence similarity
NP_699833.1	similar to GP:15158699; identified by sequence similarity
NP_699834.1	similar to GP:15158700; identified by sequence similarity
NP_699835.1	similar to GP:15158701; identified by sequence similarity
NP_699836.1	similar to GP:15158702; identified by sequence similarity
NP_699837.1	similar to GB:Y00636, GB:X06296, SP:P19256, PID:34347, PID:34350, and PID:540515; identified by sequence similarity
NP_699838.1	similar to GP:15157708; identified by sequence similarity
NP_699839.1	similar to GP:15140275, and GP:43244; identified by sequence similarity
NP_699840.1	similar to GP:15140276; identified by sequence similarity
NP_699841.1	similar to GP:15160208; identified by sequence similarity
NP_699842.1	part of the UgpABCE glycerol-3-phosphate uptake system
NP_699843.1	similar to GP:15075030; identified by sequence similarity
NP_699844.1	similar to GP:15074401; identified by sequence similarity
NP_699845.1	similar to GP:15140670; identified by sequence similarity
NP_699848.1	similar to GP:15073153; identified by sequence similarity
NP_699849.1	similar to GP:15156879; identified by sequence similarity
NP_699851.1	identified by match to PFAM protein family HMM PF03647
NP_699852.1	proposed role in polysaccahride synthesis
NP_699855.1	similar to GP:15075528; identified by sequence similarity
NP_699857.1	similar to GP:15157658, and SP:P15028; identified by sequence similarity
NP_699858.1	similar to GP:15157659, and SP:P37738; identified by sequence similarity
NP_699859.1	similar to GP:15157660, and SP:P37737; identified by sequence similarity
NP_699860.1	similar to GP:15157661, and GP:15023678; identified by sequence similarity
NP_699861.1	similar to GP:14023727; identified by sequence similarity
NP_699863.1	similar to GP:15139898; identified by sequence similarity
NP_699864.1	similar to GP:15076300; identified by sequence similarity
NP_699865.1	similar to GP:15076302; identified by sequence similarity
NP_699866.1	similar to GP:15076303, GB:J00128, GB:M58569, GB:M64982, GB:J00127, GB:K02272, GB:M26878, SP:P02671, GB:S82092, PID:182407, PID:182424, PID:182426, PID:182428, PID:458554, PID:458555, GB:J00128, GB:M58569, GB:M64982, GB:J00127, GB:K02272, GB:M26878, SP:P02671, GB:S82092, PID:182407, PID:182424, PID:182426, PID:182428, PID:458554, PID:458555, GB:J00128, GB:M58569, GB:M64982, GB:J00127, GB:K02272, GB:M26878, SP:P02671, GB:S82092, PID:182407, PID:182424, PID:182426, PID:182428, PID:458554, and PID:458555; identified by sequence similarity
NP_699867.1	identified by match to TIGR protein family HMM TIGR01622
NP_699868.1	identified by match to TIGR protein family HMM TIGR00438
NP_699869.1	identified by match to TIGR protein family HMM TIGR00897
NP_699872.1	similar to GP:15076325; identified by sequence similarity
NP_699873.1	similar to GP:13936895, and GP:2828821; identified by sequence similarity
NP_699874.1	similar to GP:9964068, GB:L19113, SP:P39143, PID:437318, and GB:AL009126; identified by sequence similarity
NP_699876.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
NP_699877.1	identified by match to TIGR protein family HMM TIGR01244
NP_699879.1	similar to GP:15155325, and SP:P71338; identified by sequence similarity
NP_699880.1	similar to GP:15155324, and SP:P35755; identified by sequence similarity
NP_699881.1	similar to GP:15155323; identified by sequence similarity
NP_699882.1	similar to GP:15075956; identified by sequence similarity
NP_699883.1	similar to GB:M92844, GB:M63625, GB:M92843, SP:P26651, PID:183443, PID:183445, PID:340013, SP:P20922, and PID:581487; identified by sequence similarity
NP_699884.1	laccase; copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification
NP_699886.1	similar to GP:15075195; identified by sequence similarity
NP_699887.1	similar to GP:12620484; identified by sequence similarity
NP_699888.1	similar to GP:12620485, and GP:12620485; identified by sequence similarity
NP_699889.1	similar to GB:L04510, SP:P36406, and PID:292070; identified by sequence similarity
NP_699890.1	similar to GP:15159268, SP:P07002, GB:X66086, PID:42457, GB:U00096, PID:1742636, PID:1742642, PID:1742653, and PID:1787886; identified by sequence similarity
NP_699891.1	similar to GP:15159273, and SP:O68965; identified by sequence similarity
NP_699892.1	similar to GP:15158705; identified by sequence similarity
NP_699893.1	similar to GP:15158707, and GP:7209271; identified by sequence similarity
NP_699894.1	similar to GP:15158708; identified by sequence similarity
NP_699895.1	similar to GP:15140221, GB:X56692, GB:M11725, GB:M11880, GB:M35163, SP:P02741, PID:181066, PID:181068, PID:181073, and PID:30213; identified by sequence similarity
NP_699896.1	similar to GP:15140222; identified by sequence similarity
NP_699897.1	similar to GP:15158391, and GP:17743296; identified by sequence similarity
NP_699898.1	similar to GP:15140224; identified by sequence similarity
YP_002519392.1	proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the protein from Pseudomonas does not have this domain
NP_699900.1	similar to GB:M64551, SP:P26514, PID:153527, GB:M64551, SP:P26514, and PID:153527; identified by sequence similarity
NP_699902.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine
NP_699903.1	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor
NP_699904.1	catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein
NP_699905.1	similar to GP:15074478; identified by sequence similarity
NP_699906.1	identified by match to TIGR protein family HMM TIGR01424
NP_699907.1	similar to GP:15024826; identified by sequence similarity
NP_699909.1	identified by match to PFAM protein family HMM PF00120
NP_699911.1	similar to GB:M33308, SP:P18206, PID:292902, and PID:340237; identified by sequence similarity
NP_699912.1	similar to GP:3236220, and GP:3236220; identified by sequence similarity
NP_699914.1	similar to GP:15075527; identified by sequence similarity
NP_699915.1	similar to GP:19747452; identified by sequence similarity
NP_699916.1	similar to GP:6119662, and GP:6119854; identified by sequence similarity
NP_699917.1	similar to SP:P46920, GB:M88282, SP:P40200, and PID:338672; identified by sequence similarity
NP_699920.1	similar to GP:15140598; identified by sequence similarity
NP_699921.1	identified by match to TIGR protein family HMM TIGR00441
NP_699922.1	similar to SP:P55604; identified by sequence similarity
NP_699923.1	similar to GP:14024269; identified by sequence similarity
NP_699925.1	similar to GP:2828820; identified by sequence similarity
NP_699926.1	similar to GP:2828821; identified by sequence similarity
NP_699927.1	identified by match to TIGR protein family HMM TIGR00969
NP_699928.1	identified by match to TIGR protein family HMM TIGR00004
NP_699931.1	similar to GP:15139930, and GP:8217385; identified by sequence similarity
NP_699932.1	similar to GP:15139929; identified by sequence similarity
NP_699933.1	similar to GP:15159961, and GP:8546929; identified by sequence similarity
NP_699935.1	similar to GP:15162366; identified by sequence similarity
NP_699936.1	similar to GB:M23114, GB:M23116, GB:M23278, GB:M23115, SP:P16614, SP:P16615, PID:306850, PID:306851, PID:567108, GB:M23114, GB:M23116, GB:M23278, GB:M23115, SP:P16614, SP:P16615, PID:306850, PID:306851, and PID:567108; identified by sequence similarity
NP_699937.1	similar to GP:15162367; identified by sequence similarity
NP_699938.1	similar to GP:15074064; identified by sequence similarity
NP_699939.2	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
NP_699940.1	identified by match to TIGR protein family HMM TIGR01436
NP_699941.1	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides
NP_699942.1	identified by match to PFAM protein family HMM PF00126
NP_699945.1	identified by match to PFAM protein family HMM PF00120
NP_699946.1	crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown
NP_699947.1	similar to SP:Q9Z3S3; identified by sequence similarity
NP_699948.1	identified by match to PFAM protein family HMM PF01047
NP_699950.1	identified by match to PFAM protein family HMM PF01037
NP_699951.1	similar to SP:O07942; identified by sequence similarity
NP_699953.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
NP_699954.1	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate
NP_699955.1	catalyzes the formation of 6-phospho-D-gluconate from 6-phospho-D-glucono-1,5-lactone
NP_699956.1	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate
NP_699957.1	catalyzes the formation of L-proline from pyrroline-5-carboxylate
NP_699958.1	similar to SP:Q53192; identified by sequence similarity
NP_699959.1	similar to SP:Q53191; identified by sequence similarity
NP_699960.1	similar to GP:17741829; identified by sequence similarity
NP_699961.1	similar to GP:15141400, and GP:15141400; identified by sequence similarity
NP_699962.1	similar to GP:14277936; identified by sequence similarity
NP_699963.1	identified by match to PFAM protein family HMM PF03794
NP_699964.1	class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine
NP_699965.1	similar to GP:14025443; identified by sequence similarity
NP_699966.1	similar to GP:15155410; identified by sequence similarity
NP_699967.1	similar to GB:X65488, SP:Q00839, PID:32358, and PID:532037; identified by sequence similarity
NP_699968.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
NP_699969.1	identified by match to PFAM protein family HMM PF02771
NP_699972.1	identified by match to PFAM protein family HMM PF02771
NP_699973.1	with NikABCD is involved with nickel transport into the cell
NP_699974.1	with NikABCE is involved in nickel transport into the cell
NP_699975.1	with NikABDE is involved in nickel transport into the cell
NP_699976.1	with NikACDE is involved in nickel transport into the cell
NP_699977.1	similar to GP:12331180, and GP:12331180; identified by sequence similarity
NP_699978.1	Inhibits transcription at high concentrations of nickel
NP_699979.1	similar to GP:15158051, GB:M25393, SP:P17706, and PID:804750; identified by sequence similarity
NP_699980.1	similar to GB:U12770, GB:U12774, GB:U12775, GB:L37019, SP:P42127, PID:540073, and PID:608648; identified by sequence similarity
NP_699981.1	similar to GP:9501758; identified by sequence similarity
NP_699982.1	identified by match to TIGR protein family HMM TIGR01409
NP_699983.1	catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism
NP_699984.1	identified by match to PFAM protein family HMM PF00392
NP_699985.1	catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate
NP_699986.1	identified by match to TIGR protein family HMM TIGR00998
NP_699987.1	may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling
NP_699988.1	may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling
NP_699989.1	identified by match to PFAM protein family HMM PF02641
NP_699990.1	identified by match to PFAM protein family HMM PF00376
NP_699992.1	identified by match to PFAM protein family HMM PF04012
NP_699993.1	similar to GP:14025434, and GP:14025434; identified by sequence similarity
NP_699995.1	identified by match to TIGR protein family HMM TIGR00024
NP_699996.1	similar to GP:14025425; identified by sequence similarity
NP_699998.1	similar to GP:15073435; identified by sequence similarity
NP_700001.1	similar to GP:15155334, and GP:15073434; identified by sequence similarity
NP_700006.1	similar to GP:7630140; identified by sequence similarity
NP_700009.1	identified by match to PFAM protein family HMM PF01420
NP_700010.1	identified by match to PFAM protein family HMM PF01170
NP_700011.1	identified by match to PFAM protein family HMM PF03809
NP_700012.1	identified by match to PFAM protein family HMM PF03726
NP_700013.1	identified by match to PFAM protein family HMM PF01863
NP_700014.1	similar to GP:6900910, GB:J00153, GB:V00491, GB:V00492, GB:J00157, GB:M22814, SP:P01922, PID:1335076, PID:1340147, PID:1340148, PID:1817577, PID:1817578, PID:183801, PID:183805, PID:28547, PID:28558, PID:386764, PID:386765, PID:537333, GB:J00153, GB:V00516, GB:V00493, GB:V00488, GB:V00489, GB:M24793, GB:M22814, SP:P01922, PID:1335076, PID:1340147, PID:1340148, PID:1817577, PID:1817578, PID:183801, PID:183805, PID:28547, PID:28558, PID:386764, PID:386765, and PID:537333; identified by sequence similarity
NP_700015.1	similar to GB:X07282, SP:P10826, PID:184477, PID:32026, PID:35883, GB:D38554, PID:1354931, and PID:559705; identified by sequence similarity
NP_700016.1	similar to PIR:PN0685, GB:X07282, SP:P10826, PID:184477, PID:32026, and PID:35883; identified by sequence similarity
NP_700019.1	identified by match to PFAM protein family HMM PF03788
NP_700020.1	identified by match to PFAM protein family HMM PF03819
NP_700021.1	identified by match to TIGR protein family HMM TIGR01472
NP_700022.1	identified by match to PFAM protein family HMM PF00893
NP_700023.1	identified by match to TIGR protein family HMM TIGR01668
NP_700025.1	identified by match to PFAM protein family HMM PF00455
NP_700027.1	similar to GP:15140211; identified by sequence similarity
NP_700028.1	identified by match to TIGR protein family HMM TIGR00972
NP_700029.1	similar to GP:15140209, and GP:15140209; identified by sequence similarity
NP_700032.1	similar to GP:4204896, and GP:4204896; identified by sequence similarity
NP_700033.1	in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane
NP_700034.1	similar to GP:4204898, and GP:4204898; identified by sequence similarity
NP_700035.1	similar to GP:4204899, and GP:4204899; identified by sequence similarity
NP_700036.1	similar to GP:4204900; identified by sequence similarity
NP_700037.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
NP_700038.1	catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity
NP_700039.1	class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis
NP_700040.1	catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate
NP_700042.1	similar to GP:15073394, and GP:15073394; identified by sequence similarity
NP_700043.1	similar to GP:15076115; identified by sequence similarity
NP_700044.1	similar to GP:17134323; identified by sequence similarity
NP_700046.1	similar to SP:P24171; identified by sequence similarity
NP_700047.1	identified by match to PFAM protein family HMM PF00903
NP_700048.1	similar to GP:15076201, and GP:15076201; identified by sequence similarity
NP_700050.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
NP_700051.1	similar to GP:15076200; identified by sequence similarity
NP_700052.1	similar to GP:15073893, and SP:O68390; identified by sequence similarity
NP_700053.1	similar to GP:14456720; identified by sequence similarity
NP_700054.1	catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde
NP_700055.1	similar to GP:15157678; identified by sequence similarity
NP_700056.1	similar to GP:15073366; identified by sequence similarity
NP_700057.1	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis
NP_700058.1	identified by match to PFAM protein family HMM PF03966
NP_700059.1	similar to GP:14024485; identified by sequence similarity
NP_700060.1	identified by match to PFAM protein family HMM PF03745
NP_700065.1	similar to GP:15155141; identified by sequence similarity
NP_700066.1	catalyzes the formation of L-proline from L-ornithine
NP_700067.1	similar to SP:P10366, GB:U02070, GB:X63697, PID:41022, PID:41708, PID:509817, GB:U00096, PID:1736697, and PID:1788330; identified by sequence similarity
NP_700068.1	identified by match to PFAM protein family HMM PF02954
NP_700069.1	similar to GP:15074497; identified by sequence similarity
NP_700070.1	similar to GP:15074498; identified by sequence similarity
NP_700071.1	similar to SP:P26606, GB:D11109, PID:216433, PID:466645, GB:U00096, and PID:1789924; identified by sequence similarity
NP_700072.1	similar to GP:15157750; identified by sequence similarity
NP_700073.1	similar to GP:15076313; identified by sequence similarity
NP_700074.1	similar to GP:15076314, and GP:15076314; identified by sequence similarity
NP_700075.1	similar to GP:15076316; identified by sequence similarity
NP_700076.1	produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine
NP_700077.1	identified by match to PFAM protein family HMM PF01380
NP_700078.1	similar to GB:X56652, GB:L05921, GB:M10906, GB:M23698, GB:X51443, SP:P02735, PID:36308, PID:36317, PID:758679, PID:758681, PID:758683, PID:825714, PID:825715, PID:825716, PID:825717, and PID:939926; identified by sequence similarity
NP_700079.1	similar to SP:Q9V249; identified by sequence similarity
NP_700080.1	similar to GP:15073129; identified by sequence similarity
NP_700081.1	similar to GP:17984539; identified by sequence similarity
NP_700082.1	identified by match to TIGR protein family HMM TIGR00998
NP_700083.1	identified by match to TIGR protein family HMM TIGR00998
NP_700085.1	similar to GP:15156636, and GP:15156636; identified by sequence similarity
NP_700086.1	similar to GP:15156635; identified by sequence similarity
NP_700087.1	similar to GP:15141030; identified by sequence similarity
NP_700088.1	similar to GP:15075757, and GP:17742129; identified by sequence similarity
NP_700089.1	similar to GP:5805087, and GP:5805087; identified by sequence similarity
NP_700090.1	identified by match to PFAM protein family HMM PF00842
NP_700091.1	catalyzes the oxidative deamination of D-amino acids
NP_700092.1	similar to GP:15076318; identified by sequence similarity
NP_700093.1	catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate
NP_700094.1	similar to SP:P22773; identified by sequence similarity
NP_700095.1	catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate
NP_700096.1	catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway
NP_700097.1	catalyzes the degradation of histidine to urocanate and ammmonia
NP_700098.1	similar to GP:15159359; identified by sequence similarity
NP_700099.1	catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism
NP_700100.1	similar to GP:15075729, and GP:15075729; identified by sequence similarity
NP_700101.1	catalyzes the transamination of D-amino acids and their alpha-keto acids
NP_700102.1	similar to GB:M33819; identified by sequence similarity
NP_700103.1	similar to GP:15485215; identified by sequence similarity
NP_700104.1	similar to GB:D14697, GB:J05262, GB:M29863, SP:P14324, PID:182399, PID:182405, PID:285965, and PID:285965; identified by sequence similarity
NP_700105.1	catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism
NP_700106.1	similar to GP:15155670, GB:M38180, GB:X55997, GB:M27137, SP:P14060, SP:P26439, PID:177191, PID:177196, PID:179468, PID:23862, PID:287844, and PID:306889; identified by sequence similarity
NP_700107.1	catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate
NP_700108.1	similar to GP:15156146, GB:L09118, GB:L23205, SP:Q05940, PID:1220370, PID:1770738, PID:292335, PID:296189, and PID:349712; identified by sequence similarity
NP_700111.1	catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit
NP_700113.1	intracellular enzymes acting on low molecular weight D-amino acid amides, esters and oligopeptides containing D-amino acids; these proteases release the N-terminal D-amino acid from a peptide, and show higher affinity for D-Ala, D-Ser or D-Thr; no preference for the stereochemistry of the second amino acid
NP_700114.1	similar to GP:15075720, and SP:P45766; identified by sequence similarity
NP_700115.1	similar to GP:15075719; identified by sequence similarity
NP_700117.1	similar to GP:15075718; identified by sequence similarity
NP_700118.1	similar to GP:15075996; identified by sequence similarity
NP_700119.1	similar to GP:15159145, and GP:15075607; identified by sequence similarity
NP_700120.1	similar to GP:15159144; identified by sequence similarity
NP_700121.1	similar to GP:15075999, and SP:P22731; identified by sequence similarity
NP_700122.1	similar to GP:15076000; identified by sequence similarity
NP_700123.1	similar to GP:15159141; identified by sequence similarity
NP_700124.1	similar to GP:15076002; identified by sequence similarity
NP_700126.1	identified by match to PFAM protein family HMM PF03734
NP_700127.1	identified by match to TIGR protein family HMM TIGR00972
NP_700128.1	identified by match to TIGR protein family HMM TIGR01594
NP_700129.1	identified by match to PFAM protein family HMM PF00903
NP_700130.1	similar to GP:15075882; identified by sequence similarity
NP_700132.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
NP_700133.1	similar to GP:15156967, and GP:15156967; identified by sequence similarity
NP_700134.1	similar to GB:X60708, GB:U13710, GB:U13711, GB:U13712, GB:U13713, GB:U13714, GB:U13715, GB:U13716, GB:U13717, GB:U13718, GB:U13719, GB:U13720, GB:U13721, GB:U13722, GB:U13723, GB:U13724, GB:U13725, GB:U13726, GB:U13727, GB:U13728, GB:U13729, GB:U13730, GB:U13731, GB:U13732, GB:U13733, GB:U13734, GB:U13735, GB:S79876, SP:P27487, PID:180083, PID:181570, PID:35336, and PID:535388; identified by sequence similarity
NP_700135.1	identified by match to TIGR protein family HMM TIGR01662
NP_700136.1	identified by match to PFAM protein family HMM PF03447
NP_700137.1	similar to GP:15075885, GB:M64979, GB:L14754, GB:L24544, SP:P38935, PID:401776, and PID:908917; identified by sequence similarity
NP_700138.1	similar to GP:15075886, GB:V00497, GB:M25113, GB:U01317, GB:M36640, GB:M25660, GB:A01592, GB:A18171, GB:M11428, GB:M25079, GB:V00500, GB:L48213, GB:U20223, GB:V00499, GB:V00498, SP:P02023, SP:P02042, PID:1066755, PID:1066758, PID:1066761, PID:1066764, PID:1066767, PID:1066770, PID:1066773, PID:1066776, PID:1066779, and PID:455998; identified by sequence similarity
NP_700139.1	similar to GB:X70218, SP:P33172, and PID:312814; identified by sequence similarity
NP_700140.1	similar to GP:15075888, and GP:15075888; identified by sequence similarity
NP_700144.1	identified by match to TIGR protein family HMM TIGR00254
NP_700146.1	similar to GP:12698385, GB:M62800, GB:U01882, SP:P19474, PID:337485, PID:338490, PID:665918, and PID:747927; identified by sequence similarity
NP_700147.1	identified by match to PFAM protein family HMM PF00117
NP_700148.1	Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor
NP_700149.1	identified by match to TIGR protein family HMM TIGR01481
NP_700150.1	similar to GP:15075894, GB:X74863, SP:P52954, PID:1617116, and PID:510998; identified by sequence similarity
NP_700151.1	similar to GP:15075895; identified by sequence similarity
NP_700152.1	identified by match to PFAM protein family HMM PF00400
NP_700153.1	similar to GP:15075513, and GP:15075513; identified by sequence similarity
NP_700154.1	in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ
NP_700155.1	in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme
NP_700156.1	identified by match to TIGR protein family HMM TIGR00004
NP_700157.1	similar to GP:15139890; identified by sequence similarity
NP_700158.1	similar to SP:P04984; identified by sequence similarity
NP_700159.1	identified by match to TIGR protein family HMM TIGR00955
NP_700160.1	similar to GP:15139893; identified by sequence similarity
NP_700161.1	similar to GP:11275975; identified by sequence similarity
NP_700162.1	similar to GP:5420003, and GP:5420003; identified by sequence similarity
NP_700163.1	similar to GB:M90413, PID:153311, GB:Z22551, GB:D13629, GB:L25616, PID:285985, and PID:409466; identified by sequence similarity
NP_700164.1	similar to GP:15156545, and GP:15156545; identified by sequence similarity
NP_700165.1	similar to SP:P47233; identified by sequence similarity
NP_700166.1	similar to SP:P81065, GB:J00117, GB:K03180, GB:K03187, GB:K03188, GB:K03189, GB:X00265, GB:X00266, GB:K03183, GB:K00092, GB:K03182, SP:P01229, SP:P01233, PID:1335012, PID:1335075, PID:180437, PID:180444, and PID:180453; identified by sequence similarity
NP_700168.1	identified by match to PFAM protein family HMM PF03772
NP_700169.1	catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate
NP_700170.1	3'-5' exonuclease of DNA polymerase III
NP_700171.1	similar to GP:15160122; identified by sequence similarity
NP_700172.1	identified by match to TIGR protein family HMM TIGR01188
NP_700173.1	identified by match to PFAM protein family HMM PF03772
NP_700174.1	identified by match to PFAM protein family HMM PF00528
NP_700175.1	identified by match to TIGR protein family HMM TIGR01698
NP_700176.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
NP_700177.1	identified by match to TIGR protein family HMM TIGR01682
NP_700178.1	identified by match to PFAM protein family HMM PF01325
NP_700180.1	similar to SP:P76269; identified by sequence similarity
NP_700182.1	identified by match to TIGR protein family HMM TIGR00004
NP_700184.1	in Escherichia coli transcription of this gene is enhanced by polyamines
NP_700185.1	protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates
NP_700186.1	functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria
NP_700187.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
NP_700188.1	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate
NP_700189.1	identified by match to TIGR protein family HMM TIGR01668
NP_700190.1	similar to GP:15073363, and GP:15073363; identified by sequence similarity
NP_700191.1	catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway
NP_700194.1	dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.
NP_700195.1	similar to GP:15073353; identified by sequence similarity
YP_002519393.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
NP_700196.1	modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth
NP_700197.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
NP_700198.1	similar to GP:14024818; identified by sequence similarity
NP_700199.1	similar to GP:15073194, and GP:15073194; identified by sequence similarity
NP_700201.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
NP_700203.1	identified by match to TIGR protein family HMM TIGR01181
NP_700204.1	BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell
NP_700206.1	identified by match to PFAM protein family HMM PF03578
NP_700207.1	identified by match to PFAM protein family HMM PF00037
NP_700208.1	similar to GP:15073254; identified by sequence similarity
NP_700209.1	D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm
NP_700210.1	catalyzes the formation of methylglyoxal from glycerone phosphate
NP_700211.1	catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate
NP_700212.1	similar to GB:U09086, GB:U09087, GB:U09088, GB:S76736, SP:P42166, SP:P42167, PID:508725, PID:508727, PID:508729, PID:885683, and PID:885684; identified by sequence similarity
NP_700213.1	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis
NP_700214.1	catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate
NP_700215.1	identified by match to PFAM protein family HMM PF03663
NP_700216.1	similar to GP:3128327, GB:U05040, and PID:460152; identified by sequence similarity
NP_700217.1	similar to GP:15155425; identified by sequence similarity
NP_700220.1	similar to GP:3336914; identified by sequence similarity
NP_700221.1	similar to GP:15074185, and GP:15074185; identified by sequence similarity
NP_700222.1	similar to GP:15157671, and SP:O66043; identified by sequence similarity
NP_700225.1	identified by match to TIGR protein family HMM TIGR01393
NP_700226.1	catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine
NP_700227.1	identified by match to PFAM protein family HMM PF00069
NP_700228.1	Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone
NP_700229.2	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate
NP_700230.2	identified by match to PFAM protein family HMM PF03670
NP_700231.1	this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress
NP_700234.1	similar to GP:581026, GB:U12707, GB:U19927, GB:U18935, and PID:622987; identified by sequence similarity
NP_700235.1	identified by match to TIGR protein family HMM TIGR01199
NP_700236.1	identified by match to PFAM protein family HMM PF00392
NP_700238.1	similar to GP:15159844; identified by sequence similarity
NP_700239.1	similar to GP:14587414; identified by sequence similarity
NP_700240.1	similar to GP:3402247; identified by sequence similarity
NP_700241.1	similar to GB:M23592, GB:M23593, GB:M23594, GB:M23595, GB:M20841, GB:M74587, GB:M59316, GB:M31145, GB:X12385, GB:X15002, GB:X13405, GB:Y00856, SP:P08833, PID:183118, PID:184810, PID:184812, PID:184826, PID:32609, PID:33014, PID:35572, and PID:35575; identified by sequence similarity
NP_700242.1	similar to SP:P94312; identified by sequence similarity
NP_700243.1	similar to SP:P94311; identified by sequence similarity
NP_700244.1	identified by match to PFAM protein family HMM PF01614
NP_700245.1	similar to GB:L17071, SP:Q07608, GB:U23753, PID:310304, and PID:763542; identified by sequence similarity
NP_700246.1	converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation
NP_700247.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_700248.1	similar to SP:P45857; identified by sequence similarity
NP_700249.1	similar to SP:P15558; identified by sequence similarity
NP_700250.1	similar to GP:15160115, and SP:P55669; identified by sequence similarity
NP_700252.1	similar to GP:10172641, and GP:18092570; identified by sequence similarity
NP_700253.1	similar to GP:15160117, and SP:P94312; identified by sequence similarity
NP_700254.1	similar to GP:15158781; identified by sequence similarity
NP_700255.1	similar to GP:14523620; identified by sequence similarity
NP_700256.1	similar to GP:18092565; identified by sequence similarity
NP_700257.1	similar to SP:P94311; identified by sequence similarity
NP_700258.1	similar to SP:P94312; identified by sequence similarity
NP_700259.1	similar to SP:Q53194, GB:M62834, SP:P24093, GB:X69102, PID:145801, PID:433881, PID:639970, and SP:Q57254; identified by sequence similarity
NP_700260.1	similar to GB:M20867, GB:M18377, GB:J03248, GB:M17697, GB:M37154, GB:X07769, GB:X53146, GB:X66300, SP:P00367, SP:P49448, PID:1335082, PID:183054, PID:183056, PID:183058, PID:183060, PID:183062, PID:31707, PID:31799, PID:478988, and PID:579924; identified by sequence similarity
NP_700261.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
NP_700262.1	identified by match to TIGR protein family HMM TIGR00969
NP_700263.1	similar to SP:P23860, GB:L26967, SP:P12780, PID:152249, and PID:435107; identified by sequence similarity
NP_700264.1	identified by match to PFAM protein family HMM PF03781
NP_700266.1	similar to GP:15075256, GB:X12466, GB:M37716, GB:M15919, SP:P08578, PID:338267, PID:338269, and PID:35105; identified by sequence similarity
NP_700267.1	similar to GB:J00222, GB:S55273, SP:P01854, PID:184760, PID:2300106, PID:386807, GB:J00222, GB:S55273, SP:P01854, PID:184760, PID:2300106, and PID:386807; identified by sequence similarity
NP_700269.1	identified by match to PFAM protein family HMM PF02452
NP_700270.1	identified by match to TIGR protein family HMM TIGR01199
NP_700271.1	similar to GP:581026, GB:U12707, GB:U19927, GB:U18935, and PID:622987; identified by sequence similarity
NP_700273.1	similar to GP:14024748, and GP:14024748; identified by sequence similarity
NP_700274.1	identified by match to PFAM protein family HMM PF02082
NP_700275.1	similar to GP:15160214; identified by sequence similarity
NP_700277.1	similar to GP:15074849, and SP:P39172; identified by sequence similarity
NP_700278.1	similar to GP:15156606; identified by sequence similarity
NP_700279.1	similar to GP:15074847, and GP:17739944; identified by sequence similarity
NP_700280.1	similar to GP:15156604; identified by sequence similarity
NP_700283.1	similar to GP:15073620; identified by sequence similarity
NP_700284.1	similar to GP:15073619, and GP:15073619; identified by sequence similarity
NP_700285.1	similar to GP:3876134; identified by sequence similarity
NP_700286.1	FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus
NP_700287.1	membrane protein involved in the flagellar export apparatus
NP_700288.1	FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum
NP_700289.1	acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
NP_700290.1	post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA: Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
NP_700291.1	acts as an activator or flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
NP_700292.1	with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella
NP_700293.1	with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook
NP_700294.1	the hook connects flagellar basal body to the flagellar filament
NP_700295.1	similar to GP:15073608; identified by sequence similarity
NP_700296.1	similar to GP:15073607, and GP:15073607; identified by sequence similarity
NP_700297.1	similar to GP:15155510, and SP:Q52964; identified by sequence similarity
NP_700298.1	with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine
NP_700299.1	similar to GP:15155507, and GP:12057223; identified by sequence similarity
NP_700300.1	the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod
NP_700301.1	similar to GP:2832232; identified by sequence similarity
NP_700302.1	similar to GP:15162141, and GP:15162141; identified by sequence similarity
NP_700304.1	similar to GB:X03656, GB:X03438, GB:M17706, SP:P09919, PID:1330309, PID:1330310, PID:183041, PID:183045, PID:296647, PID:31690, and PID:732764; identified by sequence similarity
NP_700305.1	with XylFH is part of the high affinity xylose ABC transporter
NP_700306.1	similar to GB:L17326, and PID:306325; identified by sequence similarity
NP_700308.1	similar to SP:P36673, GB:U07790, PID:465107, PID:537083, GB:U00096, PID:1790689, and PID:1843456; identified by sequence similarity
NP_700309.1	similar to GP:4566586; identified by sequence similarity
NP_700310.1	similar to GB:M79446, SP:P24182, GB:M83198, PID:145175, PID:145893, PID:145896, PID:606196, GB:U00096, PID:1789654, GB:U03272, SP:P35556, and PID:437972; identified by sequence similarity
NP_700312.1	similar to GB:M98276, SP:Q04626, GB:M64046, PID:151020, PID:45360, SP:P77915, PID:1515308, GB:M13300, GB:M13301, GB:M13302, GB:M13303, GB:M13304, GB:M13305, GB:X54705, GB:X54675, GB:Z68193, SP:P04000, SP:P04001, PID:1122284, and PID:180703; identified by sequence similarity
NP_700313.1	similar to GP:14424793; identified by sequence similarity
NP_700314.1	similar to GB:X75771, and PID:455422; identified by sequence similarity
NP_700315.1	similar to GP:10048282, and SP:Q05354; identified by sequence similarity
NP_700316.1	identified by match to PFAM protein family HMM PF03551
NP_700317.1	similar to GP:15162021, and GP:14026357; identified by sequence similarity
NP_700318.1	similar to GP:14524116; identified by sequence similarity
NP_700319.1	identified by match to TIGR protein family HMM TIGR00699
NP_700320.1	similar to GB:M60787, and PID:150163; identified by sequence similarity
NP_700321.1	similar to GP:14271863; identified by sequence similarity
NP_700322.1	similar to GB:D12765, SP:P43268, PID:219611, and PID:602288; identified by sequence similarity
NP_700323.1	similar to GP:5441757; identified by sequence similarity
NP_700324.1	similar to GB:M11147, GB:M10119, GB:M12938, GB:X03742, GB:X03743, SP:P02792, PID:1340145, PID:1340146, PID:182514, PID:182516, PID:182518, PID:2230869, and PID:28519; identified by sequence similarity
NP_700327.1	similar to GP:9716222; identified by sequence similarity
NP_700328.1	similar to GP:15156481; identified by sequence similarity
NP_700329.1	similar to GB:M16442, and PID:143790; identified by sequence similarity
NP_700330.1	identified by match to PFAM protein family HMM PF03988
NP_700331.1	identified by match to PFAM protein family HMM PF03741
NP_700332.1	identified by match to PFAM protein family HMM PF00392
NP_700334.1	identified by match to TIGR protein family HMM TIGR00023
NP_700335.1	identified by match to TIGR protein family HMM TIGR00969
NP_700336.1	similar to SP:Q01937; identified by sequence similarity
NP_700337.1	identified by match to PFAM protein family HMM PF00149
NP_700338.1	identified by match to PFAM protein family HMM PF00884
NP_700339.1	similar to GP:7799282, and SP:Q47537; identified by sequence similarity
NP_700340.1	similar to GP:7799281; identified by sequence similarity
NP_700341.1	similar to GP:7799280, and SP:Q47539; identified by sequence similarity
NP_700342.1	similar to GP:2661680; identified by sequence similarity
NP_700343.1	similar to GB:X73376, GB:X73377, GB:X73378, GB:X73379, GB:X73380, GB:X73381, GB:X73382, GB:X73384, GB:X73385, PID:475179, and PID:475185; identified by sequence similarity
NP_700345.1	identified by match to PFAM protein family HMM PF00191
NP_700346.1	similar to GP:151110, and SP:P04816; identified by sequence similarity
NP_700347.1	similar to GB:L19201, SP:P32174, PID:304996, GB:U00096, and PID:1790325; identified by sequence similarity
NP_700348.1	similar to GB:M59757, SP:P25993, PID:143389, and GB:AL009126; identified by sequence similarity
NP_700349.1	similar to SP:P22731, GB:M16442, and PID:143790; identified by sequence similarity
NP_700350.1	similar to GP:3128316, and GP:17984226; identified by sequence similarity
NP_700351.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
NP_700354.1	identified by match to TIGR protein family HMM TIGR01281
NP_700355.1	similar to SP:P55392; identified by sequence similarity