-- dump date 20140619_011653 -- class Genbank::Gene -- table gene_note -- id note 11686227 This region contains an authentic frame shift and is not the result of a sequencing artifact; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase, authentic frameshift; similar to GP:15075909, GB:D13626, and PID:285995; identified by sequence similarity; putative 11686228 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; conserved hypothetical protein, authentic point mutation; similar to GP:4063783, and GP:4063783; identified by sequence similarity; putative 11686259 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; HlyD family secretion protein, authentic point mutation 11686264 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; flagellar motor switch protein FliG, authentic point mutation; similar to SP:O54244; identified by sequence similarity; putative 11686329 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; glucose/galactose transporter, authentic point mutation; similar to SP:Q44623, GB:S68805, SP:P50440, and PID:791049; identified by sequence similarity; putative 11686347 This region contains a gene with one or more premature stops or frameshifts, and is not the result of a sequencing artifact; peptidase, M16 family, degenerate 11686364 This region contains an authentic frame shift and is not the result of a sequencing artifact; oxidoreductase, FMN-binding, authentic frameshift 11686368 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; DNA-binding response regulator, authentic point mutation; similar to GP:15159265, GB:J00230, SP:P01857, SP:P01859, SP:P01860, SP:P01861, PID:1335110, PID:1335112, PID:1335113, PID:184758, PID:567112, and PID:577056; identified by sequence similarity; putative 11686411 This region contains an authentic frame shift and is not the result of a sequencing artifact; ABC transporter, ATP-binding protein, authentic frameshift; identified by match to TIGR protein family HMM TIGR00954 11686478 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; glutamate decarboxylase, authentic point mutation; similar to SP:P34210, and PID:550102; identified by sequence similarity; putative 11686479 This region contains an authentic frame shift and is not the result of a sequencing artifact; amino acid antiporter, putative, authentic frameshift; similar to GP:6009438, and SP:Q54152; identified by sequence similarity; putative 11686534 This region contains an authentic frame shift and is not the result of a sequencing artifact; branched-chain amino acid ABC transporter, ATP-binding/permease protein, authentic frameshift; similar to GP:17985077, GB:M99427, PID:151709, and SP:Q52451; identified by sequence similarity; putative 11686552 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; Bme15 protein, authentic point mutation; similar to GP:5478245, and SP:Q9KR69; identified by sequence similarity; putative 11686560 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; glycosyltransferase, putative, authentic point mutation; similar to GP:5478238, and GP:5478238; identified by sequence similarity; putative 11686565 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; membrane protein Bme3, authentic point mutation; similar to GP:5478234, and GP:5478234; identified by sequence similarity; putative 11686604 This region contains an authentic frame shift and is not the result of a sequencing artifact; ABC transporter, ATP-binding protein, authentic frameshift 11686610 This region contains an authentic frame shift and is not the result of a sequencing artifact; transcriptional regulator, MarR family, authentic frameshift; similar to GP:15074064, and GP:15074064; identified by sequence similarity; putative 11686689 This region contains an authentic frame shift and is not the result of a sequencing artifact; IS711, transposase orfB FRAMESHIFT; similar to PIR:PN0685; identified by sequence similarity; putative 11686692 This region contains an authentic frame shift and is not the result of a sequencing artifact; ISBm1, transposase orfB, interruption-C; similar to GP:4071222, and GP:4071222; identified by sequence similarity; putative 11686804 This region contains an authentic frame shift and is not the result of a sequencing artifact; conserved hypothetical protein, authentic frameshift; similar to GP:15157319; identified by sequence similarity; putative 11686808 This region contains an authentic frame shift and is not the result of a sequencing artifact; branched-chain amino acid aminotransferase, putative, authentic frameshift; similar to SP:P00510; identified by sequence similarity; putative 11686830 This region contains an authentic frame shift and is not the result of a sequencing artifact; sugar ABC transporter, ATP-binding protein, authentic frameshift; similar to GP:15076324, and GP:17984770; identified by sequence similarity; putative 11686836 This region contains an authentic frame shift and is not the result of a sequencing artifact; fdhD protein, authentic frameshift; similar to GP:11545454, GB:X60787, GB:S41456, SP:Q01167, PID:1388160, and PID:33854; identified by sequence similarity; putative 11686853 This region contains an authentic frame shift and is not the result of a sequencing artifact; carbohydrate kinase, PfkB family, authentic frameshift; similar to GP:15158706; identified by sequence similarity; putative 11686856 This region contains an authentic frame shift and is not the result of a sequencing artifact; iolB protein, authentic frameshift; similar to GP:15158709; identified by sequence similarity; putative 11686916 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; multidrug resistance protein, putative, authentic point mutation 11686920 This region contains an authentic frame shift and is not the result of a sequencing artifact; 6-phosphogluconate dehydratase, authentic frameshift; similar to SP:Q9Z3S0; identified by sequence similarity; putative 11686923 This region contains an authentic frame shift and is not the result of a sequencing artifact; peptide ABC transporter, ATP-binding protein, authentic frameshift; similar to GP:15161804, and SP:P75796; identified by sequence similarity; putative 11686938 This region contains an authentic frame shift and is not the result of a sequencing artifact; transcriptional regulator, LysR family, putative, authentic frameshift; similar to GP:3152946, and GP:3152946; identified by sequence similarity; putative 11686948 This region contains an authentic frame shift and is not the result of a sequencing artifact; ABC transporter, permease protein, authentic frameshift 11686951 This region contains an authentic frame shift and is not the result of a sequencing artifact; mannitol dehydrogenase family protein, authentic frameshift; similar to GP:15141329, GB:Y00318, SP:P05156, PID:1335054, PID:1335055, PID:1335056, and PID:182607; identified by sequence similarity; putative 11686955 This region contains an authentic frame shift and is not the result of a sequencing artifact; multidrug efflux protein, putative, authentic frameshift; similar to GP:15160108, and GP:17431673; identified by sequence similarity; putative 11685785 This region contains an authentic frame shift and is not the result of a sequencing artifact; oxidoreductase, FAD-binding, authentic frameshift 11685812 This region contains an authentic frame shift and is not the result of a sequencing artifact; citrate lyase, beta subunit, putative, authentic frameshift; similar to SP:P77770; identified by sequence similarity; putative 11685876 This region contains an authentic frame shift and is not the result of a sequencing artifact; transcriptional regulator, GntR family, authentic frameshift; similar to GP:15160164, and GP:15160164; identified by sequence similarity; putative 11685910 This region contains an authentic frame shift and is not the result of a sequencing artifact; conserved hypothetical protein, authentic frameshift; similar to GB:L07414, GB:Z15017, GB:X96710, SP:P29965, PID:1518170, PID:180124, PID:37270, PID:38412, and PID:38484; identified by sequence similarity; putative 11685917 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; transcriptional regulator, putative, authentic point mutation; similar to GP:15075893; identified by sequence similarity; putative 11686021 This region contains an authentic frame shift and is not the result of a sequencing artifact; dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase, putative, authentic frameshift; similar to GP:3077808, and SP:P27747; identified by sequence similarity; putative 11686023 This region contains an authentic frame shift and is not the result of a sequencing artifact; dehydrogenase complex, E1 component, dehydrogenase, authentic frameshift 11686033 This region contains an authentic frame shift and is not the result of a sequencing artifact; peptide ABC transporter, ATP-binding protein, putative, authentic frameshift; similar to SP:P24137; identified by sequence similarity; putative 11686038 This region contains an authentic frame shift and is not the result of a sequencing artifact; peptide ABC transporter, permease protein, putative, authentic frameshift; similar to GP:14799990; identified by sequence similarity; putative 11686042 This region contains an authentic frame shift and is not the result of a sequencing artifact; polyamine ABC transporter, periplasmic polyamine-binding protein, putative, authentic frameshift; similar to GP:14523615, and GP:18092558; identified by sequence similarity; putative 11686045 This region contains an authentic frame shift and is not the result of a sequencing artifact; polyamine ABC transporter, ATP-binding protein, authentic point mutation; similar to GP:14523530, and GP:14523530; identified by sequence similarity; putative 11686052 This region contains an authentic frame shift and is not the result of a sequencing artifact; D-lactate dehydrogenase, authentic frameshift; similar to SP:P06149, GB:M35107, SP:P24132, and PID:144747; identified by sequence similarity; putative 11686056 Bs5SD 11686057 Bs23SC 11686060 Bs16SC 11686091 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; chemotaxis motC protein, putative, authentic point mutation; similar to GP:15155509, GB:X04588, GB:J00312, GB:M12128, SP:P12324, PID:37424, and PID:553799; identified by sequence similarity; putative 11686108 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; catechol 2,3-dioxygenase, authentic point mutation; similar to GP:3046913, GB:U08106, GB:U08107, GB:Z32772, GB:Z32773, GB:Z32774, GB:L13266, GB:L13267, GB:L13268, GB:L05666, SP:Q05586, PID:219920, PID:292287, PID:472846, and PID:472848; identified by sequence similarity; putative 11686143 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; branched-chain amino acid ABC transporter, permease protein, authentic point mutation; similar to GP:18160076; identified by sequence similarity; putative 11728837 3-hydroxy-3-methylglutarate-CoA lyase, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to EGAD:19426 11728896 amino acid efflux protein, LysE family, putative, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML3358 11727601 glutathione-dependent formaldehyde dehydrogenase, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to EGAD:20238 11727603 ATP-dependent helicase, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to SP:P37024 11727617 NADP-dependent malic enzyme, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to SP:O30808 11727669 transcriptional regulator, LuxR family, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:15140544 11727673 transcriptional regulator, Fis family, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML5216; match to protein family HMM PF02954; match to protein family HMM TIGR01199 11727677 transcriptional regulator, LacI family, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to OMNI:CC2053 11727678 ABC transporter, HlyB/MsbA family, degenerate; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error;identified by similarity to OMNI:NTL02ML0644 11727816 invasion protein B, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to SP:P35641 11727817 sensor histidine kinase, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:13641465 11727847 membrane protein, putative, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML5834 11727889 GGDEF domain, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:15140377 11727897 phosphoglycerate mutase family protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to OMNI:CC1351 11727899 cold-shock family protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to SP:Q9Z3S6; match to protein family HMM PF00313 11727977 lipoprotein, putative, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML5937 11728005 transposase, degenerate; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error;identified by similarity to SP:P05822 11728008 transposase, truncation; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error;identified by similarity to GP:17983395 11728068 conserved hypothetical protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:15155968 11728073 conserved hypothetical protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:15155976 11728340 amino acid ABC transporter, periplasmic amino acid-binding protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:15074804 11728396 peptide chain release factor 2, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:15619432 11728399 IS711, transposase orfB, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to PIR:PN0685 11728429 membrane protein, putative, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to GP:15074450 11728459 queuine tRNA-ribosyltransferase, truncation; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error;identified by similarity to SP:O32053; match to protein family HMM PF01702; match to protein family HMM TIGR00449 11728461 IS711, transposase orfB, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to PIR:PN0685 11728510 thioredoxin reductase, putative, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML0627 11728525 membrane protein, putative, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:9105279 11728674 propionyl-CoA carboxylase, beta subunit, putative, internal deletion; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:15141335 11728744 CBS domain protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML0146 11728804 acyl-CoA dehydrogenase, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML0952 11728809 transcriptional regulator, LysR family, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML0986 11728811 oxidase/dehydrogenase, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML0993 11728813 membrane protein, putative, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to OMNI:NTL01SM02005 11728968 conserved hypothetical protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to OMNI:NTL01SM02043 11729040 peptidoglycan-binding protein, putative, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML1242 11729041 transporter, putative, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:15981705 11729106 transglycosylase, degenerate; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error;identified by similarity to GP:15074494; match to protein family HMM PF01464 11729137 ABC transporter, ATP-binding/permease protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by match to protein family HMM PF00005; match to protein family HMM PF00664 11729138 ABC transporter, ATP-binding/permease protein, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML2098 11729140 purine nucleoside permease, putative, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to GP:3581905 11729145 conserved domain protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:9454389 11729179 peptide ABC transporter, periplasmic peptide-binding protein, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to GP:12082083 11729223 dihydroxyacetone kinase family protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:15141347 11729224 dihydroxyacetone kinase family protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:15141347 11729234 oxidoreductase, GMC family, degenerate; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error;identified by similarity to OMNI:NTL02ML2014 11729275 ABC transporter, ATP-binding/permease protein, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to GP:15075093 11729323 transcriptional regulator, GntR family, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML5856 11729375 photosynthesis protein modulator, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to EGAD:40368 11729385 transporter, putative, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to SP:Q07609 11729393 branched-chain amino acid ABC transporter, ATP-binding protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to EGAD:14464 11729398 D-amino acid dehydrogenase, small subunit, putative, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error 11729500 transporter, putative, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:15076110 11729513 transcriptional regulator, GntR family, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML0901 11729528 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to OMNI:NTL01BM0154 11727346 amino acid ABC transporter, permease protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to OMNI:NTL01CA0879 11727360 cysteine synthase, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to SP:P73410