-- dump date 20140619_013153 -- class Genbank::CDS -- table cds_note -- id note YP_001763304.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. YP_001763305.1 binds the polymerase to DNA and acts as a sliding clamp YP_001763306.1 negatively supercoils closed circular double-stranded DNA YP_001763307.1 SMART: HNH nuclease; KEGG: slo:Shew_3662 hypothetical protein YP_001763308.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Ankyrin; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: rfr:Rfer_3070 sigma 28 YP_001763309.1 KEGG: rfr:Rfer_3071 hypothetical protein YP_001763310.1 KEGG: har:HEAR1845 hypothetical protein YP_001763311.1 KEGG: rfr:Rfer_3073 hypothetical protein YP_001763312.1 KEGG: rfr:Rfer_3074 hypothetical protein YP_001763313.1 TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: rfr:Rfer_3075 DNA mismatch endonuclease vsr YP_001763314.1 KEGG: fre:Franean1_5336 hypothetical protein YP_001763315.1 PFAM: C-5 cytosine-specific DNA methylase; KEGG: azo:azo0354 putative methylase YP_001763316.1 PFAM: helix-turn-helix domain protein; KEGG: bvi:Bcep1808_7332 helix-turn-helix domain protein YP_001763317.1 KEGG: ppf:Pput_0005 hypothetical protein YP_001763318.1 PFAM: Integrase catalytic region; KEGG: ppf:Pput_0006 integrase, catalytic region YP_001763319.1 SMART: AAA ATPase; KEGG: bur:Bcep18194_C6544 hypothetical protein YP_001763321.1 KEGG: ppf:Pput_0008 hypothetical protein YP_001763322.1 KEGG: bvi:Bcep1808_0165 hypothetical protein YP_001763323.1 PFAM: metallophosphoesterase; KEGG: mms:mma_3037 metallophosphoesterase YP_001763324.1 KEGG: bwe:BcerKBAB4_3442 hypothetical protein YP_001763325.1 SMART: AAA ATPase; KEGG: bwe:BcerKBAB4_3443 SMC domain protein YP_001763328.1 PFAM: RepB plasmid partition; SMART: ParB domain protein nuclease; KEGG: mpt:Mpe_B0187 ParB-like nuclease YP_001763329.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; RepB plasmid partition; KEGG: mpt:Mpe_B0188 hypothetical protein YP_001763330.1 PFAM: Resolvase domain; Recombinase; KEGG: bte:BTH_I0075 recombinase YP_001763332.1 PFAM: cytochrome B561; KEGG: bur:Bcep18194_A3195 cytochrome b561 YP_001763333.1 PFAM: Catalase domain protein; KEGG: bur:Bcep18194_A3196 catalase-like YP_001763334.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bur:Bcep18194_A3197 sigma-24 (FecI-like) YP_001763335.1 KEGG: bur:Bcep18194_A3198 putative transmembrane transcriptional regulator (anti-sigma factor) YP_001763336.1 KEGG: chu:CHU_0281 hypothetical protein YP_001763337.1 KEGG: bur:Bcep18194_A3200 hypothetical protein YP_001763338.1 KEGG: bur:Bcep18194_A3202 hypothetical protein YP_001763339.1 KEGG: bur:Bcep18194_A3203 hypothetical protein YP_001763340.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_001763341.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: bam:Bamb_0013 alkylhydroperoxidase like protein, AhpD family YP_001763342.1 PFAM: protein of unknown function DUF323; KEGG: bur:Bcep18194_A3207 protein of unknown function DUF323 YP_001763343.1 KEGG: bam:Bamb_0016 hypothetical protein YP_001763344.1 KEGG: bvi:Bcep1808_0034 hypothetical protein YP_001763345.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bmu:Bmul_5809 transposase IS116/IS110/IS902 family protein YP_001763346.1 KEGG: bur:Bcep18194_A3210 hypothetical protein YP_001763347.1 KEGG: bam:Bamb_0018 hypothetical protein YP_001763348.1 PFAM: type III restriction protein res subunit; KEGG: bur:Bcep18194_A3212 type III restriction enzyme, res subunit YP_001763349.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bur:Bcep18194_A3213 site-specific DNA-methyltransferase (adenine-specific) YP_001763350.1 PFAM: porin Gram-negative type; KEGG: bam:Bamb_0021 outer membrane protein (porin)-like protein YP_001763351.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bam:Bamb_0022 two component transcriptional regulator, winged helix family YP_001763352.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: bur:Bcep18194_A3215 periplasmic sensor signal transduction histidine kinase YP_001763353.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_0042 binding-protein-dependent transport systems inner membrane component YP_001763354.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_0025 ABC transporter related YP_001763355.1 PFAM: NMT1/THI5 like domain protein; KEGG: bam:Bamb_0026 ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein YP_001763356.1 TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: bam:Bamb_0027 flagellar biosynthetic protein FliR YP_001763357.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus YP_001763358.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus YP_001763359.1 PFAM: flagellar biosynthesis protein FliO; KEGG: bur:Bcep18194_A3222 flagellar biosynthesis protein, FliO YP_001763360.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bur:Bcep18194_A3223 type III secretion system outer membrane O protein YP_001763361.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation YP_001763362.1 interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring YP_001763363.1 PFAM: LrgB family protein; KEGG: bmu:Bmul_0045 LrgB family protein YP_001763364.1 PFAM: LrgA family protein; KEGG: bam:Bamb_0035 LrgA family protein YP_001763365.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A3228 transcriptional regulator, LysR family YP_001763366.1 PFAM: PilT protein domain protein; KEGG: hha:Hhal_0789 PilT protein domain protein YP_001763367.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: smd:Smed_4693 prevent-host-death family protein YP_001763368.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_0037 drug resistance transporter, EmrB/QacA subfamily YP_001763369.1 PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_A3230 transcriptional regulator, MarR family YP_001763370.1 KEGG: bam:Bamb_0039 hypothetical protein YP_001763371.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_A3232 RND efflux system, outer membrane lipoprotein, NodT family YP_001763372.1 KEGG: bur:Bcep18194_A3233 hypothetical protein YP_001763373.1 PFAM: General secretion pathway M protein; KEGG: bur:Bcep18194_A3234 general secretion pathway M protein YP_001763374.1 TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L; KEGG: bur:Bcep18194_A3235 general secretion pathway L protein YP_001763375.1 PFAM: General secretion pathway protein K; KEGG: bur:Bcep18194_A3236 general secretion pathway protein K YP_001763376.1 KEGG: bur:Bcep18194_A3237 putative general secretion pathway protein J YP_001763377.1 TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: bvi:Bcep1808_0064 general secretion pathway protein I YP_001763378.1 TIGRFAM: general secretion pathway protein H; KEGG: bur:Bcep18194_A3239 general secretion pathway protein H YP_001763379.1 TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: bur:Bcep18194_A3240 general secretion pathway protein G YP_001763380.1 KEGG: bur:Bcep18194_A3241 hypothetical protein YP_001763381.1 TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: bvi:Bcep1808_0068 general secretion pathway protein F YP_001763382.1 KEGG: bam:Bamb_0051 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase YP_001763383.1 TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: bur:Bcep18194_A3244 type II and III secretion system protein YP_001763384.1 PFAM: Lytic transglycosylase catalytic; KEGG: bam:Bamb_0053 lytic transglycosylase, catalytic YP_001763385.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bur:Bcep18194_A3246 cobalamin synthesis protein/P47K YP_001763386.1 PFAM: histone family protein DNA-binding protein; KEGG: bmu:Bmul_0066 histone family protein DNA-binding protein YP_001763387.1 catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules YP_001763388.1 PFAM: sodium/hydrogen exchanger; KEGG: bur:Bcep18194_A3249 sodium/hydrogen exchanger YP_001763389.1 ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity YP_001763390.1 PFAM: regulatory protein MarR; regulatory protein ArsR; KEGG: bam:Bamb_0061 transcriptional regulator, MarR family YP_001763391.1 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group YP_001763392.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bur:Bcep18194_A3253 NADH-flavin oxidoreductase/NADH oxidase YP_001763393.1 PFAM: nuclear protein SET; KEGG: bur:Bcep18194_A3254 SET domain protein YP_001763394.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: bur:Bcep18194_A3255 periplasmic sensor signal transduction histidine kinase YP_001763395.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bmu:Bmul_0075 two component transcriptional regulator, winged helix family YP_001763396.1 KEGG: bmu:Bmul_0076 hypothetical protein YP_001763397.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction YP_001763398.1 phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin YP_001763399.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bmu:Bmul_0079 transcriptional regulator, AsnC family YP_001763400.1 PFAM: adenylate cyclase; KEGG: bur:Bcep18194_A3261 adenylate cyclase YP_001763401.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_0072 transcriptional regulator, LysR family YP_001763402.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bur:Bcep18194_A3263 glucose-methanol-choline oxidoreductase YP_001763403.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_0074 ABC transporter related YP_001763404.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_0075 ABC transporter related YP_001763405.1 KEGG: bmu:Bmul_0085 ABC branched-chain amino acid family transporter, periplasmic ligand binding protein YP_001763406.1 PFAM: inner-membrane translocator; KEGG: bvi:Bcep1808_0096 inner-membrane translocator YP_001763407.1 PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A3269 ABC branched-chain amino acid family transporter, inner membrane subunit YP_001763408.1 PFAM: Extracellular ligand-binding receptor; KEGG: bur:Bcep18194_A3271 ABC branched-chain amino acid family transporter, periplasmic ligand binding protein YP_001763409.1 PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A3272 ABC branched-chain amino acid family transporter, inner membrane subunit YP_001763410.1 PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_0082 ABC transporter related YP_001763411.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A3274 ABC branched-chain amino acid family transporter, ATPase subunit YP_001763412.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_001763413.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA YP_001763414.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bur:Bcep18194_A3277 cobyrinic acid a,c-diamide synthase YP_001763415.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bam:Bamb_0087 ParB-like partition proteins YP_001763416.1 PFAM: Citrate transporter; KEGG: bur:Bcep18194_A3279 Na+/H+ antiporter, NhaD family YP_001763417.1 KEGG: bur:Bcep18194_A3281 F0F1-type ATP synthase subunit I-like YP_001763418.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 YP_001763419.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0 YP_001763420.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel. YP_001763421.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex YP_001763422.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_001763423.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit YP_001763424.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_001763425.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane YP_001763426.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_A3290 acyl-CoA synthetase YP_001763427.1 PFAM: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_A3291 prephenate dehydratase YP_001763428.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III YP_001763429.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity YP_001763430.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein YP_001763431.1 PFAM: Extracellular ligand-binding receptor; KEGG: bam:Bamb_0104 extracellular ligand-binding receptor YP_001763432.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_A3296 AMP-dependent synthetase and ligase YP_001763433.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_A3297 acyl-CoA dehydrogenase YP_001763434.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_A3298 transcriptional regulator, TetR family YP_001763435.1 catalyzes the transfer of an amino moiety YP_001763436.1 PFAM: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_A3300 ABC amino acid transporter, periplasmic ligand binding protein YP_001763437.1 PFAM: FAD linked oxidase domain protein; KEGG: bur:Bcep18194_A3301 FAD linked oxidase-like YP_001763438.1 PFAM: transcriptional regulator PadR family protein; KEGG: bur:Bcep18194_A3302 transcriptional regulator, PadR-like family YP_001763439.1 TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bur:Bcep18194_A3303 transcriptional regulator, MerR family YP_001763440.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: bur:Bcep18194_A3304 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase YP_001763441.1 KEGG: bur:Bcep18194_A3305 hypothetical protein YP_001763442.1 PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: bur:Bcep18194_A3306 transcriptional regulator, AraC family YP_001763443.1 PFAM: Conserved TM helix repeat-containing protein; KEGG: bur:Bcep18194_A3307 hypothetical protein YP_001763444.1 TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_A3308 putative amino acid transporter YP_001763445.1 PFAM: Ethanolamine ammonia lyase large subunit; KEGG: bur:Bcep18194_A3309 ethanolamine ammonia lyase large subunit YP_001763446.1 catalyzes the formation of acetaldehyde from ethanolamine YP_001763447.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A3311 transcriptional regulator, LysR family YP_001763448.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3312 major facilitator superfamily (MFS_1) transporter YP_001763449.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bur:Bcep18194_A3313 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_001763450.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_A3314 aldehyde dehydrogenase (NAD+) YP_001763451.1 KEGG: bur:Bcep18194_A3315 hypothetical protein YP_001763452.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_A3316 transcriptional regulator, AraC family YP_001763453.1 KEGG: bur:Bcep18194_A3317 hypothetical protein YP_001763454.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bur:Bcep18194_A3318 acetolactate synthase 2 catalytic subunit YP_001763455.1 PFAM: SpoVT/AbrB domain protein; KEGG: bur:Bcep18194_A3319 SpoVT/AbrB-like protein YP_001763456.1 PFAM: PilT protein domain protein; KEGG: bvi:Bcep1808_0146 PilT protein domain protein YP_001763457.1 KEGG: bur:Bcep18194_A3321 iron-sulfur-dependent L-serine dehydratase single chain form; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_001763458.1 KEGG: bur:Bcep18194_A3322 hypothetical protein YP_001763459.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine YP_001763460.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor YP_001763461.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein YP_001763462.1 KEGG: bam:Bamb_0134 hypothetical protein YP_001763463.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bur:Bcep18194_A3327 oxidoreductase-like YP_001763464.1 KEGG: bur:Bcep18194_A3328 hypothetical protein YP_001763465.1 PFAM: UvrD/REP helicase; KEGG: bam:Bamb_0137 UvrD/REP helicase YP_001763466.1 PFAM: cytochrome c class I; KEGG: bam:Bamb_0138 cytochrome c, class I YP_001763467.1 PFAM: integrase family protein; KEGG: bmn:BMA10247_3070 prophage DLP12 integrase YP_001763468.1 PFAM: zinc finger CHC2-family protein; KEGG: bmu:Bmul_4874 zinc finger CHC2-family protein YP_001763469.1 KEGG: bps:BPSL0130a hypothetical protein YP_001763470.1 KEGG: bps:BPSL0131 hypothetical protein YP_001763472.1 KEGG: bps:BPSL0134 putative phage-encoded membrane protein YP_001763473.1 KEGG: bmu:Bmul_4870 hypothetical protein YP_001763474.1 KEGG: bmu:Bmul_4869 hypothetical protein YP_001763475.1 PFAM: transcriptional activator Ogr/delta; KEGG: bmu:Bmul_4868 transcriptional activator Ogr/delta YP_001763477.1 KEGG: csa:Csal_1362 hypothetical protein YP_001763478.1 KEGG: bps:BPSL0140 hypothetical protein YP_001763479.1 KEGG: rso:RSc1907 putative DNA-binding repressor transcription regulator protein YP_001763480.1 PFAM: regulatory protein LysR; KEGG: dac:Daci_3705 transcriptional regulator, LysR family YP_001763481.1 PFAM: late control D family protein; KEGG: bmu:Bmul_4862 late control D family protein YP_001763482.1 PFAM: P2 GpU family protein; KEGG: bmu:Bmul_4861 P2 GpU family protein YP_001763483.1 KEGG: bmu:Bmul_4860 putative phage-related tail transmembrane protein YP_001763484.1 PFAM: P2 GpE family protein; KEGG: bmu:Bmul_4859 P2 GpE family protein YP_001763485.1 PFAM: tail E family protein; KEGG: bmu:Bmul_4858 tail E family protein YP_001763486.1 TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; KEGG: bmu:Bmul_4857 phage major tail tube protein YP_001763487.1 PFAM: tail sheath protein; KEGG: bmu:Bmul_4856 tail sheath protein YP_001763488.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bmu:Bmul_4855 DNA methylase N-4/N-6 domain protein YP_001763489.1 KEGG: dvu:DVU2732 hypothetical protein YP_001763490.1 KEGG: bvi:Bcep1808_7768 hypothetical protein YP_001763491.1 KEGG: bvi:Bcep1808_7770 hypothetical protein YP_001763492.1 KEGG: bte:BTH_II1333 phage-related tail fiber protein YP_001763493.1 TIGRFAM: phage tail protein I; PFAM: tail protein I; KEGG: bmu:Bmul_4852 phage tail protein I YP_001763494.1 PFAM: Baseplate J family protein; KEGG: bmu:Bmul_4851 baseplate J family protein YP_001763495.1 PFAM: GPW/gp25 family protein; KEGG: bmu:Bmul_4850 gpW/GP25 family protein YP_001763496.1 TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V; KEGG: bmu:Bmul_4849 phage baseplate assembly protein V YP_001763497.1 KEGG: ecw:EcE24377A_1771 hypothetical protein YP_001763498.1 TIGRFAM: phage virion morphogenesis protein; PFAM: virion morphogenesis (putative tail completion) protein; KEGG: bmu:Bmul_4847 phage virion morphogenesis protein YP_001763499.1 PFAM: P2 phage tail completion R family protein; KEGG: bmu:Bmul_4846 P2 phage tail completion R family protein YP_001763500.1 KEGG: bmu:Bmul_4845 hypothetical protein YP_001763501.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bmu:Bmul_4844 peptidoglycan-binding domain 1 protein YP_001763502.1 PFAM: protein of unknown function DUF754; KEGG: bmu:Bmul_4843 protein of unknown function DUF754 YP_001763503.1 KEGG: bmu:Bmul_4842 putative phage-related transmembrane protein YP_001763504.1 PFAM: tail X family protein; KEGG: bmu:Bmul_4841 tail X family protein YP_001763505.1 PFAM: head completion protein; KEGG: bmu:Bmul_4839 head completion protein YP_001763506.1 PFAM: small terminase subunit; KEGG: bmu:Bmul_4838 small terminase subunit YP_001763507.1 TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2; KEGG: bmu:Bmul_4837 phage major capsid protein, P2 family YP_001763508.1 PFAM: capsid scaffolding; KEGG: bmu:Bmul_4836 capsid scaffolding YP_001763509.1 PFAM: protein of unknown function DUF264; putative terminase ATPase subunit; KEGG: bmu:Bmul_4835 protein of unknown function DUF264 YP_001763510.1 TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein; KEGG: bmu:Bmul_4834 phage portal protein, PBSX family YP_001763511.1 PFAM: protein of unknown function DUF159; KEGG: bam:Bamb_1843 protein of unknown function DUF159 YP_001763513.1 KEGG: bmu:Bmul_0642 GP31 YP_001763514.1 PFAM: VRR-NUC domain protein; KEGG: bmu:Bmul_0643 VRR-NUC domain protein YP_001763515.1 KEGG: bmu:Bmul_0644 bacteriophage GP29 protein YP_001763516.1 PFAM: RelA/SpoT domain protein; KEGG: vvy:VVA0315 hypothetical protein YP_001763517.1 KEGG: bmu:Bmul_0148 hypothetical protein YP_001763518.1 KEGG: bte:BTH_I3216 streptogramin acetyl transferase YP_001763519.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bxe:Bxe_B0911 TPR domain protein YP_001763520.1 KEGG: reu:Reut_A1128 transferase hexapeptide repeat YP_001763521.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rme:Rmet_5236 DegT/DnrJ/EryC1/StrS aminotransferase YP_001763522.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bte:BTH_I3210 TPR domain protein YP_001763523.1 KEGG: bmu:Bmul_0149 hypothetical protein YP_001763524.1 PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: bmu:Bmul_0150 flagellar hook-associated 2 domain protein YP_001763525.1 structural flagella protein; Vibrio contains multiple flagellin genes usually localized into two region on the chromosome, flaAC and flaCEDB in V. cholerae, flaFBA and flaCDE in V. parahemolyticus; FlaA is sigma 54 dependent and essential for motility in V.cholerae but not in V. parahaemolyticus YP_001763526.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_001763527.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bur:Bcep18194_A3345 TonB-dependent siderophore receptor YP_001763528.1 PFAM: PepSY-associated TM helix domain protein; KEGG: bur:Bcep18194_A3346 uncharacterized iron-regulated membrane protein YP_001763529.1 PFAM: methyladenine glycosylase; KEGG: bur:Bcep18194_A3347 DNA-3-methyladenine glycosylase I YP_001763530.1 PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: bur:Bcep18194_A3348 BadF/BadG/BcrA/BcrD type ATPase YP_001763531.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: bur:Bcep18194_A3349 Cof protein/HAD-superfamily hydrolase subfamily IIB YP_001763532.1 porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure YP_001763533.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bam:Bamb_0162 histone family protein nucleoid-structuring protein H-NS YP_001763534.1 PFAM: glycosyl transferase group 1; KEGG: bur:Bcep18194_A3352 glycosyl transferase, group 1 YP_001763535.1 with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems YP_001763536.1 With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems YP_001763537.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine YP_001763538.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine YP_001763539.1 PFAM: response regulator receiver; KEGG: bur:Bcep18194_A3357 response regulator receiver domain protein (CheY-like) YP_001763540.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheY binding; KEGG: bur:Bcep18194_A3358 CheA signal transduction histidine kinase YP_001763541.1 PFAM: CheW domain protein; KEGG: bam:Bamb_0170 CheW protein YP_001763542.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bur:Bcep18194_A3360 methyl-accepting chemotaxis sensory transducer YP_001763543.1 PFAM: MCP methyltransferase CheR-type; KEGG: bur:Bcep18194_A3361 MCP methyltransferase, CheR-type YP_001763544.1 stimulates methylation of MCP proteins; catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors YP_001763545.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins YP_001763546.1 PFAM: response regulator receiver; KEGG: bam:Bamb_0175 response regulator receiver protein YP_001763547.1 cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation YP_001763548.1 KEGG: bur:Bcep18194_A3366 hypothetical protein YP_001763549.1 KEGG: bur:Bcep18194_A3367 hypothetical protein YP_001763550.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: bur:Bcep18194_A3368 3-demethylubiquinone-9 3-methyltransferase YP_001763551.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export YP_001763552.1 membrane protein involved in the flagellar export apparatus YP_001763553.1 positive regulator of class III flagellar genes YP_001763554.1 KEGG: bur:Bcep18194_A3373 flagellar biosynthesisprotein, FlhG YP_001763555.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes YP_001763556.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine YP_001763557.1 PFAM: membrane protein of unknown function; KEGG: bam:Bamb_0187 membrane protein of unknown function YP_001763558.1 KEGG: bur:Bcep18194_A3377 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase YP_001763559.1 PFAM: Amidase; KEGG: bur:Bcep18194_A3378 amidase YP_001763560.1 PFAM: dienelactone hydrolase; KEGG: bur:Bcep18194_A3379 carboxymethylenebutenolidase YP_001763561.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bur:Bcep18194_A3380 2-nitropropane dioxygenase, NPD YP_001763562.1 PFAM: Extracellular ligand-binding receptor; KEGG: bmu:Bmul_0186 extracellular ligand-binding receptor YP_001763563.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3382 major facilitator superfamily (MFS_1) transporter YP_001763564.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bur:Bcep18194_A3383 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_001763565.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bur:Bcep18194_A3384 histone-like nucleoid-structuring protein H-NS YP_001763566.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bur:Bcep18194_A3385 cation efflux protein YP_001763567.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bmu:Bmul_0192 transcriptional regulator, AsnC family YP_001763568.1 KEGG: bam:Bamb_0198 hypothetical protein YP_001763569.1 PFAM: beta-lactamase domain protein; KEGG: bur:Bcep18194_A3388 beta-lactamase-like YP_001763570.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: bur:Bcep18194_A3389 rare lipoprotein A YP_001763571.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: bxe:Bxe_A2660 putative reverse transcriptase-maturase-endonucleas YP_001763572.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bur:Bcep18194_A3390 methyltransferase YP_001763573.1 PFAM: protein of unknown function UPF0102; KEGG: bur:Bcep18194_A3391 hypothetical protein YP_001763574.1 KEGG: bmu:Bmul_0198 phosphoheptose isomerase YP_001763575.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: bur:Bcep18194_A3393 periplasmic or secreted lipoprotein YP_001763576.1 PFAM: cytochrome c class I; KEGG: bur:Bcep18194_A3394 cytochrome c, class I YP_001763577.1 KEGG: bur:Bcep18194_A3395 hypothetical protein YP_001763578.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bam:Bamb_0216 glucarate dehydratase YP_001763579.1 TIGRFAM: d-galactonate transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3397 D-galactonate transporter YP_001763580.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:RL0348 putative LysR family transcriptional regulator YP_001763581.1 PFAM: Glutathione S-transferase domain; KEGG: rle:RL0349 putative glutathione-S-transferase YP_001763582.1 KEGG: bur:Bcep18194_A3398 hypothetical protein YP_001763583.1 PFAM: Carotenoid oxygenase; KEGG: bam:Bamb_0219 carotenoid oxygenase YP_001763584.1 PFAM: protein of unknown function DUF214; KEGG: bur:Bcep18194_A3400 ABC efflux pump, inner membrane subunit YP_001763585.1 PFAM: protein of unknown function DUF214; KEGG: bur:Bcep18194_A3401 ABC efflux pump, inner membrane subunit YP_001763586.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A3402 ABC efflux pump, ATPase subunit YP_001763587.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bam:Bamb_0223 efflux transporter, RND family, MFP subunit YP_001763588.1 KEGG: bvi:Bcep1808_0288 hypothetical protein YP_001763589.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bur:Bcep18194_A3406 6-phosphogluconate dehydrogenase, NAD-binding YP_001763590.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bam:Bamb_0227 lysine exporter protein (LysE/YggA) YP_001763591.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3408 major facilitator superfamily (MFS_1) transporter YP_001763592.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_0229 transcriptional regulator, LysR family YP_001763593.1 PFAM: OmpW family protein; KEGG: bur:Bcep18194_A3410 OmpW family protein YP_001763594.1 KEGG: bvi:Bcep1808_0294 hypothetical protein YP_001763595.1 KEGG: bur:Bcep18194_A3412 hypothetical protein YP_001763596.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis YP_001763597.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: bam:Bamb_0234 flavodoxin/nitric oxide synthase YP_001763598.1 PFAM: PEBP family protein; KEGG: bur:Bcep18194_A3415 phospholipid-binding protein, YbhB/YbcL-like YP_001763599.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate YP_001763600.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate YP_001763601.1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates YP_001763602.1 KEGG: bur:Bcep18194_A3419 hypothetical protein YP_001763603.1 KEGG: bur:Bcep18194_A3420 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_001763604.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bur:Bcep18194_A3421 transcriptional regulator, AsnC family YP_001763605.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A3422 GCN5-related N-acetyltransferase YP_001763606.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_A3423 transcriptional regulator, TetR family YP_001763607.1 PFAM: Domain of unknown function DUF1835; KEGG: bur:Bcep18194_A3424 hypothetical protein YP_001763608.1 TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bam:Bamb_0245 phenylacetate-CoA oxygenase/reductase, PaaK subunit YP_001763609.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: bam:Bamb_0246 phenylacetate-CoA oxygenase, PaaJ subunit YP_001763610.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: bam:Bamb_0247 phenylacetate-CoA oxygenase, PaaI subunit YP_001763611.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation YP_001763612.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA YP_001763613.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bur:Bcep18194_A3430 lipolytic enzyme, G-D-S-L YP_001763614.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_001763615.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force YP_001763616.1 Modulates Rho-dependent transcription termination YP_001763617.1 binds directly to 23S ribosomal RNA YP_001763618.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA YP_001763619.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit YP_001763620.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors YP_001763621.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_001763622.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter YP_001763623.1 KEGG: bam:Bamb_0261 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases YP_001763624.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance YP_001763625.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_001763626.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_001763627.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_001763628.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex YP_001763629.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_001763630.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_001763631.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel YP_001763632.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_001763633.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_001763634.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_001763635.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation YP_001763636.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_001763637.1 one of the stabilizing components for the large ribosomal subunit YP_001763638.1 primary binding protein; helps mediate assembly; involved in translation fidelity YP_001763639.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase YP_001763640.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_001763641.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 YP_001763642.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif YP_001763643.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit YP_001763644.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_001763645.1 binds 5S rRNA along with protein L5 and L25 YP_001763646.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance YP_001763647.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 YP_001763648.1 late assembly protein YP_001763649.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase YP_001763650.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_001763651.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif YP_001763652.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_001763653.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 YP_001763654.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination YP_001763655.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_001763656.1 is a component of the macrolide binding site in the peptidyl transferase center YP_001763657.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: bam:Bamb_0295 CutA1 divalent ion tolerance protein YP_001763658.1 PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain; KEGG: bur:Bcep18194_A3476 protein-disulfide reductase YP_001763659.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_001763660.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential YP_001763661.1 PFAM: cytochrome c class I; KEGG: bur:Bcep18194_A3479 cytochrome c, class I YP_001763662.1 PFAM: ResB family protein; KEGG: bur:Bcep18194_A3480 ResB-like/cytochrome c biosynthesis protein YP_001763663.1 TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: bur:Bcep18194_A3481 cytochrome c assembly protein YP_001763664.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ YP_001763665.1 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme YP_001763666.1 KEGG: bam:Bamb_0304 putative lipoprotein YP_001763667.1 defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly YP_001763668.1 KEGG: bur:Bcep18194_A3486 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_001763669.1 KEGG: bam:Bamb_0307 hypothetical protein YP_001763670.1 PFAM: Fimbrial assembly family protein; KEGG: bam:Bamb_0308 hypothetical protein YP_001763671.1 KEGG: bam:Bamb_0309 hypothetical protein YP_001763672.1 TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: bur:Bcep18194_A3488 type II and III secretion system protein YP_001763673.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis YP_001763674.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis YP_001763675.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate YP_001763676.1 with UgpACE is involved in the uptake of glycerol-3-phosphate YP_001763677.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_0315 binding-protein-dependent transport systems inner membrane component YP_001763678.1 with UgpABC is involved in uptake of glycerol-3-phosphate YP_001763679.1 part of the UgpABCE glycerol-3-phosphate uptake system YP_001763680.1 hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate YP_001763681.1 PFAM: OmpW family protein; KEGG: bam:Bamb_0319 OmpW family protein YP_001763682.1 PFAM: protein of unknown function DUF1568; KEGG: bur:Bcep18194_A3498 protein of unknown function DUF1568 YP_001763683.1 PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: bur:Bcep18194_A3499 glutamate synthase (ferredoxin) YP_001763684.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate YP_001763685.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: bmu:Bmul_0307 amino acid carrier protein YP_001763686.1 TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: bmu:Bmul_0308 2'-5' RNA ligase YP_001763687.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A3504 D-amino-acid dehydrogenase YP_001763688.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3505 major facilitator superfamily (MFS_1) transporter YP_001763689.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_A3506 short-chain dehydrogenase/reductase SDR YP_001763690.1 PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_A3507 ABC transporter, fused ATPase and inner membrane subunits YP_001763691.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A3508 FAD dependent oxidoreductase YP_001763692.1 with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate YP_001763693.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate YP_001763694.1 KEGG: bur:Bcep18194_A3511 thiamine-phosphate diphosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_001763695.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A3512 ABC transporter, ATPase subunit YP_001763696.1 PFAM: protein of unknown function DUF140; KEGG: bur:Bcep18194_A3513 ABC transporter, inner membrane subunit YP_001763697.1 PFAM: Mammalian cell entry related domain protein; KEGG: bur:Bcep18194_A3514 ABC transporter, inner membrane subunit YP_001763698.1 PFAM: VacJ family lipoprotein; KEGG: bam:Bamb_0335 VacJ family lipoprotein YP_001763699.1 PFAM: toluene tolerance family protein; KEGG: bam:Bamb_0336 toluene tolerance family protein YP_001763700.1 KEGG: bur:Bcep18194_A3517 hypothetical protein YP_001763701.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_0399 ABC transporter related YP_001763702.1 PFAM: ABC-2 type transporter; KEGG: bmu:Bmul_0324 ABC-2 type transporter YP_001763703.1 PFAM: BolA family protein; KEGG: bam:Bamb_0340 BolA family protein YP_001763704.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_001763705.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ YP_001763706.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer YP_001763707.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_001763708.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis YP_001763709.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bur:Bcep18194_A3526 multiple antibiotic resistance (MarC)-related proteins YP_001763710.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_001763711.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide YP_001763712.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase YP_001763713.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers YP_001763714.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis YP_001763715.1 KEGG: bmu:Bmul_0337 membrane protein YP_001763716.1 PFAM: histidine triad (HIT) protein; KEGG: bvi:Bcep1808_0414 histidine triad (HIT) protein YP_001763717.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes YP_001763718.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: bur:Bcep18194_A3535 sec-independent translocase YP_001763719.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: bur:Bcep18194_A3536 sec-independent periplasmic protein translocase YP_001763720.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: bam:Bamb_0357 peptidase S1 and S6, chymotrypsin/Hap YP_001763721.1 PFAM: protein of unknown function DUF34; KEGG: bam:Bamb_0358 protein of unknown function DUF34 YP_001763722.1 KEGG: bmu:Bmul_0344 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein YP_001763723.1 PFAM: Cytochrome b/b6 domain; KEGG: bur:Bcep18194_A3540 cytochrome b/b6-like YP_001763724.1 PFAM: cytochrome c1; KEGG: bam:Bamb_0361 cytochrome c1 YP_001763725.1 PFAM: Glutathione S-transferase domain; KEGG: bmu:Bmul_0347 glutathione S-transferase domain YP_001763726.1 PFAM: Stringent starvation protein B; KEGG: bam:Bamb_0363 stringent starvation protein B YP_001763727.1 KEGG: rde:RD1_4058 hypothetical protein YP_001763729.1 KEGG: aav:Aave_3261 hypothetical protein YP_001763730.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: bps:BPSL3115 putative transcriptional regulator YP_001763731.1 KEGG: bps:BPSL3114 hypothetical protein YP_001763732.1 KEGG: bam:Bamb_0365 hypothetical protein YP_001763733.1 PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: bur:Bcep18194_A3548 ABC amino acid transporter, periplasmic ligand binding protein YP_001763734.1 TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: bam:Bamb_0367 rhs element Vgr protein YP_001763735.1 TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; KEGG: bam:Bamb_0368 YD repeat protein YP_001763736.1 KEGG: pfl:PFL_2369 hypothetical protein YP_001763737.1 TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; KEGG: bam:Bamb_0368 YD repeat protein YP_001763738.1 KEGG: pfl:PFL_0661 hypothetical protein YP_001763739.1 KEGG: bam:Bamb_0368 YD repeat protein YP_001763740.1 KEGG: bvi:Bcep1808_0455 hypothetical protein YP_001763741.1 KEGG: bvi:Bcep1808_0456 hypothetical protein YP_001763742.1 TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: bam:Bamb_0378 protein of unknown function DUF876 YP_001763743.1 KEGG: bur:Bcep18194_A3557 hypothetical protein YP_001763744.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: bvi:Bcep1808_0459 tetratricopeptide TPR_2 repeat protein YP_001763745.1 TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: bur:Bcep18194_A3559 hypothetical protein YP_001763746.1 TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: bur:Bcep18194_A3560 protein of unknown function DUF877 YP_001763747.1 TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: bam:Bamb_0383 protein of unknown function DUF796 YP_001763748.1 TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: bur:Bcep18194_A3562 protein of unknown function DUF1316 YP_001763749.1 TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: bam:Bamb_0385 protein of unknown function DUF879 YP_001763750.1 TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: bvi:Bcep1808_0465 protein of unknown function DUF1305 YP_001763751.1 KEGG: bur:Bcep18194_A3565 chaperonin ClpA/B/, ATPase; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase YP_001763752.1 TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein; KEGG: bur:Bcep18194_A3566 ImpA-like YP_001763753.1 KEGG: bmu:Bmul_2914 hypothetical protein YP_001763755.1 KEGG: bam:Bamb_0389 hypothetical protein YP_001763757.1 PFAM: OmpA/MotB domain protein; KEGG: bur:Bcep18194_A3573 outer membrane protein, OmpA/MotB family YP_001763758.1 KEGG: bur:Bcep18194_A3574 hypothetical protein YP_001763759.1 TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: bur:Bcep18194_A3575 hypothetical protein YP_001763760.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: bmu:Bmul_2906 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin YP_001763761.1 KEGG: bur:Bcep18194_A3577 hypothetical protein YP_001763762.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: bur:Bcep18194_A3578 Mg2+ transporter protein, CorA-like YP_001763763.1 KEGG: bur:Bcep18194_A3579 hypothetical protein YP_001763764.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_A3580 zinc-containing alcohol dehydrogenase superfamily YP_001763765.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A3581 transcriptional regulator, LysR family YP_001763766.1 PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: bur:Bcep18194_A3582 peptidase M1, membrane alanine aminopeptidase YP_001763767.1 SMART: Water Stress and Hypersensitive response domain protein; KEGG: bur:Bcep18194_A3583 hypothetical protein YP_001763768.1 PFAM: protein of unknown function DUF1508; KEGG: bam:Bamb_0400 protein of unknown function DUF1508 YP_001763769.1 PFAM: methyltransferase small; KEGG: bvi:Bcep1808_0478 methyltransferase small YP_001763770.1 KEGG: bur:Bcep18194_A3585 hypothetical protein YP_001763771.1 PFAM: protein of unknown function DUF1415; KEGG: bur:Bcep18194_A3586 protein of unknown function DUF1415 YP_001763772.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_A3587 transcriptional regulator, TetR family YP_001763773.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_0405 major facilitator superfamily MFS_1 YP_001763774.1 PFAM: nitroreductase; KEGG: bur:Bcep18194_A3589 nitroreductase YP_001763775.1 KEGG: bur:Bcep18194_A3590 molecular chaperone-like YP_001763776.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bam:Bamb_0408 cold-shock DNA-binding domain protein YP_001763777.1 PFAM: amino acid permease-associated region; KEGG: bvi:Bcep1808_0486 amino acid permease-associated region YP_001763778.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: bur:Bcep18194_A3593 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YP_001763779.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate YP_001763780.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: bur:Bcep18194_A3595 glutaredoxin-related protein YP_001763781.1 TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; KEGG: bur:Bcep18194_A3596 modification methylase HemK YP_001763782.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 YP_001763783.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins YP_001763784.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_A3599 two component transcriptional regulator, winged helix family YP_001763785.1 KEGG: bam:Bamb_0417 hypothetical protein YP_001763786.1 PFAM: creatinase; peptidase M24; KEGG: bur:Bcep18194_A3601 peptidase M24 YP_001763787.1 PFAM: isochorismatase hydrolase; KEGG: bur:Bcep18194_A3602 isochorismatase hydrolase YP_001763788.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bur:Bcep18194_A3603 HAD-superfamily hydrolase subfamily IA, variant 3 YP_001763789.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence YP_001763790.1 KEGG: bvi:Bcep1808_0499 hypothetical protein YP_001763791.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A3606 transcriptional regulator, LysR family YP_001763792.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_0424 major facilitator superfamily MFS_1 YP_001763793.1 PFAM: protein of unknown function DUF661; KEGG: bur:Bcep18194_A3608 protein of unknown function DUF661 YP_001763794.1 TIGRFAM: GABA permease; PFAM: amino acid permease-associated region; KEGG: bam:Bamb_0426 GabA permease YP_001763795.1 KEGG: bam:Bamb_3904 hypothetical protein YP_001763796.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 YP_001763797.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: bur:Bcep18194_A3612 hypothetical protein YP_001763798.1 KEGG: bur:Bcep18194_A3613 protein-disulfide isomerase-like YP_001763799.1 PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: bur:Bcep18194_A3614 peptidase M61 YP_001763800.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: bur:Bcep18194_A3615 (acyl-carrier protein) phosphodiesterase YP_001763801.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine YP_001763802.1 PFAM: adenylate cyclase; KEGG: bur:Bcep18194_A3617 adenylate cyclase YP_001763803.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water YP_001763804.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate YP_001763805.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity YP_001763806.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine YP_001763807.1 TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bur:Bcep18194_A3622 2-phosphoglycolate phosphatase YP_001763808.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate YP_001763809.1 protein associated with Co2+ and Mg2+ efflux YP_001763810.1 PFAM: MltA domain protein; 3D domain protein; KEGG: bur:Bcep18194_A3625 membrane-bound lytic murein transglycosylase YP_001763811.1 TIGRFAM: phenylacetate-CoA ligase; KEGG: bur:Bcep18194_A3626 phenylacetate-CoA ligase YP_001763812.1 TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: bur:Bcep18194_A3627 phenylacetic acid degradation protein PaaD YP_001763813.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001763814.1 catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA YP_001763815.1 TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_A3630 phenylacetic acid degradation protein paaN2 YP_001763816.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001763817.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: bur:Bcep18194_A3632 molybdopterin oxidoreductase YP_001763818.1 activates fatty acids by binding to coenzyme A YP_001763819.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_A3634 outer membrane protein, (porin) YP_001763820.1 KEGG: bvi:Bcep1808_0525 ubiquinone biosynthesis protein COQ7-like protein YP_001763821.1 MraZ; UPF0040; crystal structure shows similarity to AbrB YP_001763822.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: bur:Bcep18194_A3637 S-adenosyl-methyltransferase MraW YP_001763823.1 PFAM: cell division protein FtsL; KEGG: bmu:Bmul_2843 cell division protein FtsL YP_001763824.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: bur:Bcep18194_A3639 peptidoglycan glycosyltransferase YP_001763825.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate YP_001763826.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: bur:Bcep18194_A3641 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D -alanyl ligase YP_001763827.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_001763828.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation YP_001763829.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: bvi:Bcep1808_0534 cell division protein FtsW YP_001763830.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis YP_001763831.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis YP_001763832.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli YP_001763833.1 PFAM: Polypeptide-transport-associated domain protein FtsQ-type; KEGG: bur:Bcep18194_A3648 cell division protein FtsQ YP_001763834.1 PFAM: cell division protein FtsA; KEGG: bur:Bcep18194_A3649 cell division protein FtsA YP_001763835.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function YP_001763836.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bur:Bcep18194_A3651 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_001763837.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis YP_001763838.1 KEGG: bur:Bcep18194_A3653 hypothetical protein YP_001763839.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins YP_001763840.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate YP_001763841.1 PFAM: protein of unknown function DUF815; SMART: AAA ATPase; KEGG: bur:Bcep18194_A3656 protein of unknown function DUF815 YP_001763842.1 PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A3657 NUDIX hydrolase YP_001763843.1 PFAM: protein of unknown function DUF329; KEGG: bam:Bamb_0476 protein of unknown function DUF329 YP_001763844.1 PFAM: protein of unknown function DUF1342; KEGG: bam:Bamb_0477 protein of unknown function DUF1342 YP_001763845.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis YP_001763846.1 PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: bur:Bcep18194_A3661 prepilin peptidase YP_001763847.1 PFAM: type II secretion system protein; KEGG: bur:Bcep18194_A3662 type II secretion system protein F YP_001763848.1 PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: bur:Bcep18194_A3663 type II secretion system protein E YP_001763849.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: bur:Bcep18194_A3664 hypothetical protein YP_001763850.1 PFAM: Polyprenyl synthetase; KEGG: bur:Bcep18194_A3665 trans-hexaprenyltranstransferase YP_001763851.1 PFAM: ribosomal protein L21; KEGG: bmu:Bmul_2802 ribosomal protein L21 YP_001763852.1 involved in the peptidyltransferase reaction during translation YP_001763853.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication YP_001763854.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis YP_001763855.1 PFAM: Protein of unknown function CNP1-like; KEGG: bur:Bcep18194_A3670 hypothetical protein YP_001763856.1 hydrolyzes diadenosine polyphosphate YP_001763857.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) YP_001763858.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bmu:Bmul_2795 multiple antibiotic resistance (MarC)-related protein YP_001763859.1 Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively YP_001763860.1 KEGG: bam:Bamb_0493 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_001763861.1 PFAM: cytochrome c assembly protein; KEGG: bur:Bcep18194_A3676 cytochrome c assembly protein YP_001763862.1 KEGG: bur:Bcep18194_A3677 hypothetical protein YP_001763863.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: bur:Bcep18194_A3678 N-acetyl-anhydromuranmyl-L-alanine amidase YP_001763864.1 Catalyzes the rate-limiting step in dNTP synthesis YP_001763865.1 Catalyzes the rate-limiting step in dNTP synthesis YP_001763866.1 KEGG: bvi:Bcep1808_0572 hypothetical protein YP_001763867.1 KEGG: bam:Bamb_0500 hypothetical protein YP_001763868.1 PFAM: 17 kDa surface antigen; KEGG: bvi:Bcep1808_0574 17 kDa surface antigen YP_001763869.1 PFAM: PfkB domain protein; KEGG: bur:Bcep18194_A3683 adenosine kinase YP_001763870.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bur:Bcep18194_A3684 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_001763871.1 TIGRFAM: MJ0042 family finger-like protein; KEGG: bur:Bcep18194_A3685 hypothetical protein YP_001763872.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype YP_001763873.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism YP_001763874.1 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism YP_001763875.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis YP_001763876.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bur:Bcep18194_A3690 thiol-disulfide isomerase/thioredoxin-like YP_001763877.1 KEGG: bmu:Bmul_2776 hypothetical protein YP_001763878.1 TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: bam:Bamb_0511 UDP-N-acetylmuramate YP_001763879.1 PFAM: protein of unknown function UPF0227; KEGG: bur:Bcep18194_A3693 hypothetical protein YP_001763880.1 PFAM: ribonuclease II; KEGG: bur:Bcep18194_A3694 ribonuclease II YP_001763881.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate YP_001763882.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan YP_001763883.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: bur:Bcep18194_A3697 carboxypeptidase C (cathepsin A)-like YP_001763884.1 KEGG: bur:Bcep18194_A3698 hypothetical protein YP_001763885.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bam:Bamb_0518 transcriptional regulator, IclR family YP_001763886.1 PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: bur:Bcep18194_A3700 2-keto-3-deoxy-galactonokinase YP_001763887.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism YP_001763888.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_A3702 short chain dehydrogenase YP_001763889.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_A3703 ABC sugar transporter, periplasmic ligand binding protein YP_001763890.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose YP_001763891.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose YP_001763892.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_A3706 short-chain dehydrogenase/reductase SDR YP_001763893.1 PFAM: Aldose 1-epimerase; KEGG: bur:Bcep18194_A3707 aldose 1-epimerase YP_001763894.1 type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase YP_001763895.1 KEGG: bur:Bcep18194_A3709 hypothetical protein YP_001763896.1 PFAM: CinA domain protein; KEGG: bam:Bamb_0529 CinA domain protein YP_001763897.1 PFAM: phosphatidylglycerophosphatase A; KEGG: bur:Bcep18194_A3711 phosphatidylglycerophosphatase A YP_001763898.1 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP YP_001763899.1 NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate YP_001763900.1 PFAM: guanine-specific ribonuclease N1 and T1; KEGG: bur:Bcep18194_A3714 guanine-specific ribonuclease N1 and T1 YP_001763901.1 KEGG: bvi:Bcep1808_0607 hypothetical protein YP_001763902.2 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase YP_001763903.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_A3720 glyoxalase/bleomycin resistance protein/dioxygenase YP_001763904.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine YP_001763905.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase YP_001763906.1 KEGG: bam:Bamb_0539 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_001763907.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A3724 transcriptional regulator, LysR family YP_001763908.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_A3725 short-chain dehydrogenase/reductase SDR YP_001763909.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_A3728 zinc-containing alcohol dehydrogenase superfamily YP_001763910.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3729 major facilitator superfamily (MFS_1) transporter YP_001763911.1 controls the expression of the cynTSX operon involved in degrading and using cyanate as a sole nitrogen source YP_001763912.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bmu:Bmul_2741 GntR domain protein YP_001763913.1 involved in the transport of C4-dicarboxylates across the membrane YP_001763914.1 catalyzes the formation of S-ureidoglycolate and urea from allantoate YP_001763915.1 catalyzes the formation of glyoxylate from (S)-ureidoglycolate YP_001763916.1 PFAM: ferric-uptake regulator; KEGG: bmu:Bmul_2737 ferric uptake regulator, Fur family YP_001763917.1 PFAM: SmpA/OmlA domain protein; KEGG: bam:Bamb_0545 SmpA/OmlA domain protein YP_001763918.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis YP_001763919.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bur:Bcep18194_A3738 MotA/TolQ/ExbB proton channel YP_001763920.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bam:Bamb_0548 biopolymer transport protein ExbD/TolR YP_001763921.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase YP_001763922.1 PFAM: Rare lipoprotein B; KEGG: bvi:Bcep1808_0623 rare lipoprotein B YP_001763923.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA YP_001763924.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway YP_001763925.1 PFAM: conserved hypothetical protein; KEGG: bam:Bamb_0553 conserved hypothetical protein 701 YP_001763926.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bam:Bamb_0554 transcriptional regulator, RpiR family YP_001763927.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate YP_001763928.1 KEGG: bur:Bcep18194_A3747 2-dehydro-3-deoxyphosphogluconate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase YP_001763929.1 TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: bam:Bamb_0557 gluconate transporter YP_001763930.1 KEGG: bam:Bamb_0558 carbohydrate kinase, thermoresistant glucokinase family; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase YP_001763931.1 PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: bur:Bcep18194_A3750 putative transcriptional regulator, TetR family YP_001763932.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A3751 FAD dependent oxidoreductase YP_001763933.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide YP_001763934.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_0562 transcriptional regulator, LysR family YP_001763935.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: bur:Bcep18194_A3754 Glu/Leu/Phe/Val dehydrogenase YP_001763936.1 PFAM: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_A3755 ABC amino acid transporter, periplasmic ligand binding protein YP_001763937.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_0636 polar amino acid ABC transporter, inner membrane subunit YP_001763938.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_0637 polar amino acid ABC transporter, inner membrane subunit YP_001763939.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A3758 ABC amino acid transporter, ATPase subunit YP_001763940.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Pertactin; Autotransporter beta- domain protein; KEGG: bur:Bcep18194_A3759 outer membrane autotransporter barrel YP_001763941.1 PFAM: glutamine amidotransferase class-II; KEGG: bur:Bcep18194_A3761 glutamine amidotransferase, class-II YP_001763942.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis YP_001763943.1 KEGG: bmu:Bmul_2707 hypothetical protein YP_001763944.1 PFAM: OsmC family protein; KEGG: bur:Bcep18194_A3763 OsmC-like protein YP_001763945.1 KEGG: bur:Bcep18194_A3764 hypothetical protein YP_001763946.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_001763947.1 forms a direct contact with the tRNA during translation YP_001763948.1 essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors YP_001763949.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling YP_001763950.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) YP_001763951.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine YP_001763952.1 PFAM: Phosphoglycerate mutase; KEGG: bam:Bamb_0579 phosphoglycerate mutase YP_001763953.1 PFAM: Putative ParB-like nuclease; KEGG: bur:Bcep18194_A3772 hypothetical protein YP_001763954.1 KEGG: bur:Bcep18194_A3773 hypothetical protein YP_001763955.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration YP_001763956.1 plays an essential role in ATP-dependent branch migration of the Holliday junction YP_001763957.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity YP_001763958.1 involved in de novo purine biosynthesis YP_001763959.1 PFAM: helix-turn-helix Fis-type; KEGG: bam:Bamb_0585 helix-turn-helix, fis-type YP_001763960.1 TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: bam:Bamb_0586 putative TIM-barrel protein, nifR3 family YP_001763961.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A3780 hypothetical protein YP_001763962.1 PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: bur:Bcep18194_A3781 peptidase M24B YP_001763963.1 PFAM: Glutathione S-transferase domain; KEGG: bam:Bamb_0589 glutathione S-transferase, N-terminal domain YP_001763964.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: bam:Bamb_0590 glutamate synthase (NADPH) YP_001763965.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_001763966.1 PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A3785 NUDIX hydrolase YP_001763967.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: bmu:Bmul_2684 alanine dehydrogenase/PNT domain protein YP_001763968.1 KEGG: bmu:Bmul_2683 NAD/NADP transhydrogenase alpha subunit-like protein YP_001763969.1 PFAM: NAD(P) transhydrogenase beta subunit; KEGG: bmu:Bmul_2682 NAD(P)(+) transhydrogenase (AB-specific) YP_001763970.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A3789 transcriptional regulator, LysR family YP_001763971.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bam:Bamb_0595 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001763972.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: bur:Bcep18194_A3791 transcriptional regulator-like YP_001763973.1 KEGG: bur:Bcep18194_A3792 glyoxalase/bleomycin resistance protein/dioxygenase YP_001763974.1 KEGG: bur:Bcep18194_A3794 hypothetical protein YP_001763975.1 PFAM: putative RNA methylase; THUMP domain protein; KEGG: bur:Bcep18194_A3795 putative RNA methylase YP_001763976.1 KEGG: bur:Bcep18194_A3796 site-specific recombinase-like YP_001763977.1 PFAM: protein of unknown function DUF330; KEGG: bur:Bcep18194_A3798 protein of unknown function DUF330 YP_001763978.1 PFAM: Mammalian cell entry related domain protein; KEGG: bur:Bcep18194_A3799 mammalian cell entry related-protein YP_001763979.1 PFAM: Paraquat-inducible protein A; KEGG: bmu:Bmul_2673 paraquat-inducible protein A YP_001763980.1 PFAM: Paraquat-inducible protein A; KEGG: bvi:Bcep1808_0674 paraquat-inducible protein A YP_001763981.1 PFAM: cytochrome B561; KEGG: bam:Bamb_0605 cytochrome b561 YP_001763982.1 PFAM: YceI family protein; KEGG: bam:Bamb_0606 YceI family protein YP_001763983.1 PFAM: YceI family protein; KEGG: bam:Bamb_0607 YceI family protein YP_001763984.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_0608 major facilitator superfamily MFS_1 YP_001763986.1 PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: bur:Bcep18194_A3806 peptidase S41 YP_001763987.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF YP_001763988.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane YP_001763989.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex YP_001763990.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr) YP_001763991.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step YP_001763992.1 catalyzes branch migration in Holliday junction intermediates YP_001763993.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A3813 transcriptional regulator, LysR family YP_001763994.1 TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: bur:Bcep18194_A3814 haem catalase/peroxidase YP_001763995.1 KEGG: bam:Bamb_0617 hypothetical protein YP_001763996.1 PFAM: Ferritin Dps family protein; KEGG: bam:Bamb_0618 ferritin, Dps family protein YP_001763997.1 catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway YP_001763998.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate YP_001763999.1 PFAM: alanine racemase domain protein; KEGG: bur:Bcep18194_A3817 hypothetical protein YP_001764000.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bur:Bcep18194_A3818 glycolate oxidase iron-sulfur subunit YP_001764001.1 PFAM: FAD linked oxidase domain protein; KEGG: bur:Bcep18194_A3819 glycolate oxidase FAD binding subunit YP_001764002.1 PFAM: FAD linked oxidase domain protein; KEGG: bur:Bcep18194_A3820 FAD linked oxidase-like YP_001764003.1 PFAM: FAD linked oxidase domain protein; KEGG: bur:Bcep18194_A3821 FAD linked oxidase-like YP_001764004.1 TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: bvi:Bcep1808_0697 ATP--cobalamin adenosyltransferase YP_001764005.1 PFAM: globin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bam:Bamb_0627 globin YP_001764006.1 PFAM: PilT protein domain protein; KEGG: bam:Bamb_0628 PilT protein domain protein YP_001764007.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: bam:Bamb_0629 prevent-host-death family protein YP_001764008.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive YP_001764009.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: bam:Bamb_0632 peptidase U62, modulator of DNA gyrase YP_001764010.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bur:Bcep18194_A3828 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001764011.1 KEGG: bur:Bcep18194_A3829 hypothetical protein YP_001764012.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme YP_001764013.1 KEGG: bur:Bcep18194_A3831 DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; SMART: AAA ATPase YP_001764014.1 catalyzes the phosphorylation of NAD to NADP YP_001764015.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons YP_001764016.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic YP_001764017.1 PFAM: RNA-binding S4 domain protein; KEGG: bur:Bcep18194_A3836 RNA-binding S4 YP_001764018.1 KEGG: bam:Bamb_0642 hypothetical protein YP_001764019.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor YP_001764020.1 KEGG: bur:Bcep18194_A3838 hypothetical protein YP_001764021.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria YP_001764022.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion YP_001764023.1 PFAM: Chorismate binding-like; KEGG: bam:Bamb_0648 anthranilate synthase component I and chorismate binding protein YP_001764024.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate YP_001764025.1 PFAM: deoxynucleoside kinase; KEGG: bur:Bcep18194_A3843 deoxynucleoside kinase YP_001764026.1 KEGG: bur:Bcep18194_A3844 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_001764027.1 KEGG: bur:Bcep18194_A3845 poly(A) polymerase, PcnB; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region YP_001764028.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: bam:Bamb_0653 HAD-superfamily subfamily IB hydrolase, TIGR01490 YP_001764029.1 TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA; KEGG: bam:Bamb_0654 chromosomal replication initiator, DnaA YP_001764030.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis YP_001764031.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3850 major facilitator superfamily (MFS_1) transporter YP_001764032.1 PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: bur:Bcep18194_A3851 transcriptional regulator, TetR family YP_001764033.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity YP_001764034.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex YP_001764035.1 PFAM: SNARE associated Golgi protein; KEGG: bur:Bcep18194_A3854 putative DedA family transmembrane protein YP_001764036.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bam:Bamb_0662 MscS mechanosensitive ion channel YP_001764037.1 KEGG: bur:Bcep18194_A3856 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein YP_001764038.1 PFAM: Capsule polysaccharide biosynthesis protein; KEGG: bte:BTH_I1325 WcbA YP_001764039.1 PFAM: glycosyl transferase group 1; KEGG: bte:BTH_I1326 glycosyltransferase, putative YP_001764040.1 PFAM: polysaccharide export protein; KEGG: bur:Bcep18194_A3859 polysaccharide export protein YP_001764041.1 PFAM: glycosyl transferase group 1; KEGG: bur:Bcep18194_A3860 glycosyl transferase, group 1 YP_001764042.1 KEGG: azc:AZC_0143 hypothetical protein YP_001764043.1 TIGRFAM: methyltransferase FkbM family; KEGG: pde:Pden_5028 hypothetical protein YP_001764044.1 PFAM: glycosyl transferase group 1; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: gox:GOX1606 lipopolysaccharide N-acetylglucosaminyltransferase I YP_001764045.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A3867 ABC transporter, ATPase subunit YP_001764046.1 PFAM: ABC-2 type transporter; KEGG: bur:Bcep18194_A3868 hypothetical protein YP_001764047.1 KEGG: bte:BTH_I1337 WcbD YP_001764048.1 PFAM: Capsule polysaccharide biosynthesis protein; KEGG: bur:Bcep18194_A3870 capsule polysaccharide biosynthesis YP_001764049.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bte:BTH_I1339 oxidoreductase, short-chain dehydrogenase/reductase family YP_001764050.1 PFAM: sulfatase; KEGG: bur:Bcep18194_A3872 sulfatase YP_001764051.1 PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; Methyltransferase type 12; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase; KEGG: bur:Bcep18194_A3873 beta-ketoacyl synthase YP_001764052.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis YP_001764053.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aminotransferase class I and II; KEGG: bur:Bcep18194_A3875 glycine C-acetyltransferase YP_001764054.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A3876 hypothetical protein YP_001764055.1 PFAM: adenylylsulfate kinase; KEGG: bam:Bamb_0664 adenylyl-sulfate kinase YP_001764056.1 PFAM: glutamine amidotransferase class-II; KEGG: bur:Bcep18194_A3877 glutamine amidotransferase, class-II YP_001764057.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: bam:Bamb_0666 alkylhydroperoxidase like protein, AhpD family YP_001764058.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_A3879 transcriptional regulator, AraC family YP_001764059.1 PFAM: YiaAB two helix domain protein; KEGG: bur:Bcep18194_A3880 YiaAB two helix membrane protein YP_001764060.1 KEGG: bxe:Bxe_C0462 putative DNA relaxase/nickase, TraS/VirD2-like YP_001764061.1 KEGG: bxe:Bxe_C0461 plasmid-related protein YP_001764062.1 KEGG: psp:PSPPH_A0142 hypothetical protein YP_001764063.1 KEGG: plt:Plut_1918 hypothetical protein YP_001764066.1 KEGG: pfl:PFL_2088 transcriptional regulator, Cro/CI family YP_001764067.1 TIGRFAM: tol-pal system protein YbgF; KEGG: bur:Bcep18194_A3887 hypothetical protein YP_001764068.1 TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: bvi:Bcep1808_0731 OmpA domain protein YP_001764069.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA YP_001764070.1 TIGRFAM: TonB family protein; protein TolA; PFAM: Tol-Pal system TolA; KEGG: bur:Bcep18194_A3890 TonB/TolA-like protein YP_001764071.1 TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bmu:Bmul_2585 protein TolR YP_001764072.1 TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: bmu:Bmul_2584 protein TolQ YP_001764073.1 TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: bam:Bamb_0681 4-hydroxybenzoyl-CoA thioesterase YP_001764074.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_0682 short-chain dehydrogenase/reductase SDR YP_001764075.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_001764076.1 PFAM: ATP-cone domain protein; KEGG: bmu:Bmul_2580 ATP-cone domain protein YP_001764077.1 KEGG: bur:Bcep18194_A3901 putative Tfp pilus assembly protein PilE YP_001764078.1 KEGG: bur:Bcep18194_A3902 hypothetical protein YP_001764079.1 KEGG: bur:Bcep18194_A3903 membrane protein YP_001764080.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: bur:Bcep18194_A3904 protein of unknown function DUF883, ElaB YP_001764081.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bur:Bcep18194_A3905 peroxidase YP_001764082.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_A3906 acyl-CoA dehydrogenase-like YP_001764083.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bur:Bcep18194_A3907 transcriptional regulator, IclR family YP_001764084.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bam:Bamb_0696 glutathione-dependent formaldehyde-activating, GFA YP_001764085.1 PFAM: EAL domain protein; KEGG: bam:Bamb_0697 diguanylate phosphodiesterase YP_001764086.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A3910 hypothetical protein YP_001764087.1 KEGG: bur:Bcep18194_A3911 hypothetical protein YP_001764088.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_0700 major facilitator superfamily MFS_1 YP_001764089.1 An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine YP_001764090.1 KEGG: bam:Bamb_0702 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969 YP_001764091.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: bxe:Bxe_A1589 RNA-directed DNA polymerase YP_001764092.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_0703 major facilitator superfamily MFS_1 YP_001764093.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3916 major facilitator superfamily (MFS_1) transporter YP_001764094.1 TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: bur:Bcep18194_A3917 nitroreductase YP_001764095.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bur:Bcep18194_A3918 D-lactate dehydrogenase YP_001764096.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A3919 transcriptional regulator, LysR family YP_001764097.1 PFAM: aminotransferase class V; KEGG: bur:Bcep18194_A3920 aminotransferase, class V YP_001764098.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_A3921 transcriptional regulator, AraC family YP_001764099.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_A3922 protein of unknown function DUF6, transmembrane YP_001764100.1 KEGG: bvi:Bcep1808_4356 hypothetical protein YP_001764101.1 PFAM: Integrase catalytic region; KEGG: bpe:BP1810 transposase YP_001764102.1 PFAM: RES domain protein; KEGG: scl:sce3521 hypothetical protein YP_001764103.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3923 hypothetical protein YP_001764104.1 TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: bam:Bamb_0711 molybdopterin dehydrogenase, FAD-binding YP_001764105.1 KEGG: bam:Bamb_0712 xanthine dehydrogenase; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_001764106.1 TIGRFAM: xanthine dehydrogenase accessory protein XdhC; KEGG: bam:Bamb_0713 xanthine and CO dehydrogenase maturation factor XdhC/CoxF family-like protein YP_001764107.1 KEGG: bam:Bamb_0714 hypothetical protein YP_001764108.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A3928 transcriptional regulator, LysR family YP_001764109.1 PFAM: DSBA oxidoreductase; KEGG: bur:Bcep18194_A3929 DsbA oxidoreductase YP_001764110.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: bur:Bcep18194_A3930 TRAP-type uncharacterized transport system periplasmic component-like YP_001764111.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: bam:Bamb_0718 transport-associated YP_001764112.1 KEGG: bur:Bcep18194_A3932 hypothetical protein YP_001764113.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: bur:Bcep18194_A3933 carboxypeptidase C (cathepsin A)-like YP_001764114.1 PFAM: DNA polymerase beta domain protein region; KEGG: hch:HCH_05728 probable transcriptional regulator YP_001764116.1 PFAM: protein of unknown function DUF81; KEGG: bur:Bcep18194_A3934 protein of unknown function DUF81 YP_001764117.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3935 drug resistance transporter EmrB/QacA subfamily YP_001764118.1 PFAM: DSBA oxidoreductase; KEGG: bur:Bcep18194_A3936 DsbA oxidoreductase YP_001764119.1 PFAM: YheO domain protein; KEGG: bam:Bamb_0722 YheO domain protein YP_001764120.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: bur:Bcep18194_A3938 ornithine cyclodeaminase/mu-crystallin YP_001764121.1 PFAM: extracellular solute-binding protein family 3; KEGG: bmu:Bmul_2538 extracellular solute-binding protein family 3 YP_001764122.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A3940 D-amino-acid dehydrogenase YP_001764123.1 KEGG: bur:Bcep18194_A3941 hypothetical protein YP_001764124.1 PFAM: Secreted repeat of unknown function; KEGG: bam:Bamb_0726 secreted repeat of unknown function YP_001764125.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bur:Bcep18194_A3943 sigma-24 (FecI-like) YP_001764126.1 KEGG: bur:Bcep18194_A3944 putative transmembrane transcriptional regulator (anti-sigma factor) YP_001764127.1 KEGG: bur:Bcep18194_A3945 hypothetical protein YP_001764128.1 KEGG: bur:Bcep18194_A3946 hypothetical protein YP_001764129.1 KEGG: bur:Bcep18194_A3947 hypothetical protein YP_001764130.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring YP_001764131.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth YP_001764132.1 PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: bam:Bamb_0734 phosphomethylpyrimidine kinase type-1 YP_001764133.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: bam:Bamb_0735 rubredoxin-type Fe(Cys)4 protein YP_001764134.1 KEGG: bur:Bcep18194_A3961 hypothetical protein YP_001764135.1 PFAM: protein of unknown function DUF179; KEGG: bur:Bcep18194_A3962 hypothetical protein YP_001764136.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function YP_001764137.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity YP_001764138.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis YP_001764139.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides YP_001764140.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: bur:Bcep18194_A3967 phospholipid/glycerol acyltransferase YP_001764141.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP YP_001764142.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bmu:Bmul_2596 dTDP-glucose 4,6-dehydratase YP_001764143.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: bte:BTH_I1470 glucose-1-phosphate thymidylyltransferase YP_001764144.1 KEGG: bmu:Bmul_2598 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_001764145.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bam:Bamb_0754 dTDP-4-dehydrorhamnose reductase YP_001764146.1 KEGG: ajs:Ajs_0541 rhamnosyltransferase YP_001764147.1 PFAM: ABC-2 type transporter; KEGG: bam:Bamb_0744 ABC-2 type transporter YP_001764148.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_0745 ABC transporter related YP_001764149.1 PFAM: glycosyl transferase family 2; KEGG: pst:PSPTO_1074 glycosyl transferase, group 2 family protein YP_001764150.1 KEGG: bpd:BURPS668_3258 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein YP_001764151.1 PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: gbe:GbCGDNIH1_0744 glycosyltransferase YP_001764152.1 PFAM: glycosyl transferase family 2; KEGG: pst:PSPTO_1074 glycosyl transferase, group 2 family protein YP_001764153.1 KEGG: bvi:Bcep1808_3211 lipopolysaccharide biosynthesis protein-like protein YP_001764154.1 PFAM: glycosyl transferase family 2; KEGG: bur:Bcep18194_A3981 glycosyl transferase, family 2 YP_001764155.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bam:Bamb_0763 NAD-dependent epimerase/dehydratase YP_001764156.1 PFAM: glycosyl transferase family 4; KEGG: bam:Bamb_0764 glycosyl transferase, family 4 YP_001764157.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bur:Bcep18194_A3984 polysaccharide biosynthesis protein CapD YP_001764158.1 PFAM: glycosyl transferase family 4; KEGG: bam:Bamb_0767 glycosyl transferase, family 4 YP_001764159.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: bur:Bcep18194_A3986 UDP-glucose 4-epimerase YP_001764160.1 PFAM: glycosyl transferase group 1; KEGG: bur:Bcep18194_A3987 glycosyl transferase, group 1 YP_001764161.1 PFAM: glycosyl transferase family 2; KEGG: bur:Bcep18194_A3988 glycosyl transferase, family 2 YP_001764162.1 PFAM: polysaccharide biosynthesis protein; KEGG: bur:Bcep18194_A3989 membrane protein YP_001764163.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: bam:Bamb_0772 phosphomannomutase YP_001764164.1 TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; KEGG: bur:Bcep18194_A4000 lipopolysaccharide heptosyltransferase I YP_001764165.1 KEGG: bam:Bamb_0774 hypothetical protein YP_001764166.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A YP_001764167.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: bur:Bcep18194_A4003 urease accessory protein UreG YP_001764168.1 PFAM: Urease accessory protein UreF; KEGG: bvi:Bcep1808_0831 urease accessory protein UreF YP_001764169.1 involved in the assembly of the urease metallocenter; possible nickel donor YP_001764170.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_001764171.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active YP_001764172.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter YP_001764173.1 PFAM: Urease accessory protein UreD; KEGG: bam:Bamb_0782 urease accessory protein UreD YP_001764174.1 PFAM: Domain of unknown function DUF1814; KEGG: bvi:Bcep1808_6909 hypothetical protein YP_001764175.1 KEGG: rso:RS05227 hypothetical protein YP_001764176.1 KEGG: bvi:Bcep1808_0837 ABC transporter related; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase YP_001764177.1 TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: bur:Bcep18194_A4011 ABC transporter, ATPase subunit YP_001764178.1 TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A4012 ABC branched chain amino acid family transporter, inner membrane subunit YP_001764179.1 TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A4013 ABC branched chain amino acid family transporter, inner membrane subunit YP_001764180.1 TIGRFAM: urea ABC transporter, urea binding protein; KEGG: bur:Bcep18194_A4014 ABC branched chain amino acid family transporter, periplasmic ligand binding protein YP_001764181.1 PFAM: Rhodanese domain protein; KEGG: bur:Bcep18194_A4015 rhodanese-related sulfurtransferase YP_001764182.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; methyltransferase small; Methyltransferase type 11; KEGG: bur:Bcep18194_A4016 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_001764183.1 KEGG: bur:Bcep18194_A4017 hypothetical protein YP_001764184.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_001764185.1 PFAM: protein of unknown function UPF0153; KEGG: bur:Bcep18194_A4019 hypothetical protein YP_001764186.1 KEGG: bur:Bcep18194_A4020 hypothetical protein YP_001764187.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell YP_001764188.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine YP_001764189.1 KEGG: gsu:GSU0959 hypothetical protein YP_001764190.1 KEGG: gur:Gura_2882 hypothetical protein YP_001764191.1 PFAM: transposase IS3/IS911 family protein; KEGG: rme:Rmet_5496 transposase IS3/IS911 YP_001764192.1 PFAM: Integrase catalytic region; KEGG: msm:MSMEG_2675 ISMsm8, transposase YP_001764193.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: bur:Bcep18194_A4028 protein of unknown function DUF861 YP_001764194.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bur:Bcep18194_A4034 mandelate racemase/muconate lactonizing enzyme YP_001764195.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_A4035 lysine exporter family protein (LysE/YggA) YP_001764196.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4037 transcriptional regulator, LysR family YP_001764197.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4038 major facilitator superfamily (MFS_1) transporter YP_001764198.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_A4039 L-carnitine dehydratase/bile acid-inducible protein F YP_001764199.1 catalyzes the formation of propanoyl-CoA from methylmalonyl-CoA YP_001764200.1 PFAM: Chromate transporter; KEGG: bur:Bcep18194_A4041 chromate transporter YP_001764201.1 PFAM: Chromate transporter; KEGG: bur:Bcep18194_A4042 chromate transporter YP_001764202.1 PFAM: regulatory protein GntR HTH; regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: bur:Bcep18194_A4043 transcriptional regulator, DeoR family YP_001764203.1 PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A4044 nucleoside diphosphate pyrophosphatase YP_001764204.1 KEGG: bur:Bcep18194_A4045 hypothetical protein YP_001764205.1 PFAM: Silent information regulator protein Sir2; KEGG: bur:Bcep18194_A4046 NAD-dependent protein deacetylase SIR2 family YP_001764206.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bam:Bamb_0804 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_001764207.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling YP_001764208.1 PFAM: protein of unknown function DUF190; KEGG: bur:Bcep18194_A4048 protein of unknown function DUF190 YP_001764209.1 PFAM: protein of unknown function YGGT; KEGG: bvi:Bcep1808_0865 protein of unknown function YGGT YP_001764210.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bur:Bcep18194_A4050 hypothetical protein YP_001764211.1 KEGG: bur:Bcep18194_A4051 hypothetical protein YP_001764212.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_A4052 lysine exporter family protein (LysE/YggA) YP_001764213.1 TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: bam:Bamb_0811 UbiD family decarboxylases YP_001764214.1 PFAM: Lytic transglycosylase catalytic; KEGG: bur:Bcep18194_A4054 lytic transglycosylase, catalytic YP_001764215.1 PFAM: aminotransferase class I and II; KEGG: bur:Bcep18194_A4055 aminotransferase YP_001764216.1 Regulates rRNA biosynthesis by transcriptional antitermination YP_001764217.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not YP_001764218.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis YP_001764219.1 KEGG: bvi:Bcep1808_0875 hypothetical protein YP_001764220.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine YP_001764221.1 KEGG: bur:Bcep18194_A4064 riboflavin biosynthesis protein RibD/riboflavin-specific deaminase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein YP_001764222.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway YP_001764223.1 KEGG: bam:Bamb_0823 hypothetical protein YP_001764224.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_0824 drug resistance transporter, Bcr/CflA subfamily YP_001764225.1 glucokinase catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate YP_001764226.1 TIGRFAM: 6-phosphogluconolactonase; KEGG: bam:Bamb_0826 6-phosphogluconolactonase YP_001764227.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_001764228.1 PFAM: extracellular solute-binding protein family 1; KEGG: bvi:Bcep1808_0884 extracellular solute-binding protein, family 1 YP_001764229.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmu:Bmul_2429 binding-protein-dependent transport systems inner membrane component YP_001764230.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4073 ABC sugar transporter, inner membrane subunit YP_001764231.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_A4074 ABC sugar transporter, ATPase subunit YP_001764232.1 PFAM: protein of unknown function UPF0126; KEGG: bur:Bcep18194_A4075 hypothetical protein YP_001764233.1 PFAM: Smr protein/MutS2; KEGG: bvi:Bcep1808_0889 Smr protein/MutS2 YP_001764234.1 KEGG: bam:Bamb_0834 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001764235.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: bam:Bamb_0835 cell divisionFtsK/SpoIIIE YP_001764236.1 participates with LolB in the incorporation of lipoprotein into the outer membrane YP_001764237.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_A4080 recombination factor protein RarA YP_001764238.1 KEGG: bam:Bamb_0838 hypothetical protein YP_001764239.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001764240.1 PFAM: fatty acid desaturase; KEGG: bur:Bcep18194_A4085 alkane-1 monooxygenase YP_001764241.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A4086 GCN5-related N-acetyltransferase YP_001764242.1 blocks the formation of polar Z-ring septums YP_001764243.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bvi:Bcep1808_0900 septum site-determining protein MinD YP_001764244.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell YP_001764245.1 KEGG: bur:Bcep18194_A4090 hypothetical protein YP_001764246.1 KEGG: bam:Bamb_0847 hypothetical protein YP_001764247.1 PFAM: Chloride channel core; KEGG: bur:Bcep18194_A4091 Cl-channel, voltage gated YP_001764248.1 TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; KEGG: bur:Bcep18194_A4092 lipopolysaccharide heptosyltransferase I YP_001764249.1 KEGG: bur:Bcep18194_A4093 hypothetical protein YP_001764250.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4094 major facilitator superfamily (MFS_1) transporter YP_001764251.1 TIGRFAM: TonB family protein; KEGG: bur:Bcep18194_A4095 TonB-like protein YP_001764252.1 KEGG: bur:Bcep18194_A4097 hypothetical protein YP_001764253.1 KEGG: bur:Bcep18194_A4098 hypothetical protein YP_001764254.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_001764255.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine YP_001764256.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs YP_001764257.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: bur:Bcep18194_A4106 hypothetical protein YP_001764258.1 Essential for recycling GMP and indirectly, cGMP YP_001764259.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits YP_001764260.1 KEGG: bur:Bcep18194_A4109 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region YP_001764261.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus YP_001764262.1 PFAM: porin Gram-negative type; KEGG: bte:BTH_I1592 outer membrane porin OpcP YP_001764263.1 KEGG: bur:Bcep18194_A4112 hypothetical protein YP_001764264.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bmu:Bmul_2393 cold-shock DNA-binding domain protein YP_001764265.1 KEGG: bur:Bcep18194_A4114 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Excinuclease ABC C subunit domain protein; Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_001764266.1 catalyzes the interconversion of chorismate to prephenate YP_001764267.1 KEGG: bvi:Bcep1808_0928 hypothetical protein YP_001764268.1 KEGG: bur:Bcep18194_A4117 hypothetical protein YP_001764269.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bur:Bcep18194_A4118 TonB-dependent receptor YP_001764270.1 KEGG: bur:Bcep18194_A4120 hypothetical protein YP_001764271.1 PFAM: Transglycosylase-associated protein; KEGG: bvi:Bcep1808_0933 transglycosylase-associated protein YP_001764272.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate YP_001764273.1 TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: bur:Bcep18194_A4126 peptidase M, neutral zinc metallopeptidase, zinc-binding site YP_001764274.1 KEGG: bam:Bamb_0879 hypothetical protein YP_001764275.1 PFAM: protein of unknown function UPF0016; KEGG: bur:Bcep18194_A4128 hypothetical protein YP_001764276.1 Catalyzes the deamination of guanine YP_001764277.1 catalyzes the formation of inosine from adenosine YP_001764278.1 TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182; KEGG: bur:Bcep18194_A4132 protein of unknown function DUF182 YP_001764279.1 disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein YP_001764280.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia YP_001764281.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bur:Bcep18194_A4135 transcriptional regulator, GntR family YP_001764282.1 PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: bmu:Bmul_2371 peptidase C26 YP_001764283.1 KEGG: bur:Bcep18194_A4138 hypothetical protein YP_001764284.1 KEGG: bur:Bcep18194_A4139 hypothetical protein YP_001764285.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4140 major facilitator superfamily (MFS_1) transporter YP_001764286.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_A4141 TPR repeat protein YP_001764287.1 PFAM: monooxygenase FAD-binding; KEGG: bur:Bcep18194_A4142 monooxygenase, FAD-binding YP_001764288.1 KEGG: bur:Bcep18194_A4143 hypothetical protein YP_001764289.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: bam:Bamb_0895 formate dehydrogenase, alpha subunit YP_001764290.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: bur:Bcep18194_A4145 NADH dehydrogenase (quinone) YP_001764291.1 KEGG: bam:Bamb_0897 NADH-ubiquinone oxidoreductase 24 kD subunit-like protein YP_001764292.1 PFAM: regulatory protein LysR; KEGG: bur:Bcep18194_A4147 transcriptional regulator of molybdate metabolism, LysR family YP_001764293.1 KEGG: bvi:Bcep1808_0956 hypothetical protein YP_001764294.1 KEGG: bur:Bcep18194_A4149 hypothetical protein YP_001764295.1 TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bur:Bcep18194_A4150 2-phosphoglycolate phosphatase YP_001764296.1 Involved in ubiquinone biosynthesis YP_001764297.1 PFAM: OmpA/MotB domain protein; KEGG: bur:Bcep18194_A4152 outer membrane protein, OmpA/MotB family YP_001764298.1 negatively supercoils closed circular double-stranded DNA YP_001764299.1 KEGG: bur:Bcep18194_A4154 hypothetical protein YP_001764300.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine YP_001764301.1 TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: bur:Bcep18194_A4156 chorismate mutase/prephenate dehydratase YP_001764302.1 PFAM: Prephenate dehydrogenase; KEGG: bur:Bcep18194_A4157 prephenate dehydrogenase YP_001764303.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_001764304.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP YP_001764305.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins YP_001764306.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control YP_001764307.1 KEGG: bur:Bcep18194_A4162 hypothetical protein YP_001764308.1 SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_A4163 hypothetical protein YP_001764309.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: bur:Bcep18194_A4164 UDP-glucose 6-dehydrogenase YP_001764310.1 TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein; KEGG: bur:Bcep18194_A4165 ADP-heptose synthase (sugarkinase) YP_001764311.1 TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: bur:Bcep18194_A4166 ADP-L-glycero-D-manno-heptose-6-epimerase YP_001764312.1 KEGG: bam:Bamb_0930 helix-hairpin-helix motif YP_001764313.1 catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide YP_001764314.1 TIGRFAM: lytic murein transglycosylase B; KEGG: bur:Bcep18194_A4169 lytic murein transglycosylase B YP_001764315.1 PFAM: histone deacetylase superfamily; KEGG: bur:Bcep18194_A4170 histone deacetylase superfamily YP_001764316.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: bur:Bcep18194_A4171 alpha/beta hydrolase YP_001764317.1 part of the metNIQ transport system for methionine YP_001764318.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmu:Bmul_2244 binding-protein-dependent transport systems inner membrane component YP_001764319.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: bur:Bcep18194_A4174 ABC metal ion transporter, periplasmic ligand binding protein YP_001764320.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bmu:Bmul_2242 electron transfer flavoprotein alpha/beta-subunit YP_001764321.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: bur:Bcep18194_A4176 electron transfer flavoprotein alpha and beta-subunits YP_001764322.1 catalyzes the oxidative deamination of D-amino acids YP_001764323.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bam:Bamb_0941 transcriptional regulator, AsnC family YP_001764324.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bur:Bcep18194_A4180 radical SAM family protein YP_001764325.1 KEGG: bvi:Bcep1808_0988 hypothetical protein YP_001764326.1 KEGG: bur:Bcep18194_A4182 glucose/sorbosone dehydrogenase-like YP_001764327.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity YP_001764328.1 Essential for efficient processing of 16S rRNA YP_001764329.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA YP_001764330.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site YP_001764331.1 PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A4187 NUDIX hydrolase YP_001764332.1 PFAM: cobalamin biosynthesis protein CbiB; KEGG: bmu:Bmul_2229 cobalamin biosynthesis protein CbiB YP_001764333.1 KEGG: bur:Bcep18194_A4189 hypothetical protein YP_001764334.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity YP_001764335.1 PFAM: peptidase M48 Ste24p; KEGG: bur:Bcep18194_A4191 STE24 endopeptidase YP_001764336.1 3'-5' exoribonuclease specific for small oligoribonuclotides YP_001764337.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis YP_001764338.1 PFAM: protein of unknown function DUF615; KEGG: bur:Bcep18194_A4194 hypothetical protein YP_001764339.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: bur:Bcep18194_A4195 peptidase U62, modulator of DNA gyrase YP_001764340.1 PFAM: dihydrofolate reductase region; KEGG: bur:Bcep18194_A4196 dihydrofolate reductase YP_001764341.1 KEGG: bur:Bcep18194_A4197 hypothetical protein YP_001764342.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bur:Bcep18194_A4198 sigma54 specific transcriptional regulator, fis family YP_001764343.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived YP_001764344.1 KEGG: bur:Bcep18194_A4200 hypothetical protein YP_001764345.1 PFAM: regulatory protein ArsR; KEGG: bur:Bcep18194_A4201 transcriptional regulator, ArsR family YP_001764346.1 KEGG: bam:Bamb_0964 hypothetical protein YP_001764347.1 PFAM: thioesterase superfamily protein; KEGG: bur:Bcep18194_A4202 thioesterase superfamily YP_001764348.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle YP_001764349.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bmu:Bmul_2212 MATE efflux family protein YP_001764350.1 KEGG: bam:Bamb_0968 hypothetical protein YP_001764351.1 KEGG: bur:Bcep18194_A4206 hypothetical protein YP_001764352.1 KEGG: bur:Bcep18194_A4207 hypothetical protein YP_001764353.1 PFAM: branched-chain amino acid transport; KEGG: bur:Bcep18194_A4208 protein of unknown function DUF931 YP_001764354.1 PFAM: AzlC family protein; KEGG: bur:Bcep18194_A4209 branched chain amino acid efflux pump, AzlCD (extrudes azaleucine) YP_001764355.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: bur:Bcep18194_A4210 transcriptional regulator, AraC family YP_001764356.1 PFAM: CreA family protein; KEGG: bur:Bcep18194_A4211 conserved hypothetical protein, CreA YP_001764357.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bam:Bamb_0975 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001764358.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate YP_001764359.1 PFAM: protein of unknown function DUF162; KEGG: bur:Bcep18194_A4214 protein of unknown function DUF162 YP_001764360.1 KEGG: bur:Bcep18194_A4215 Na+/H+ antiporter NhaD and related arsenite permeases-like YP_001764361.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bur:Bcep18194_A4216 2-hydroxyacid dehydrogenase YP_001764362.1 PFAM: protein of unknown function DUF195; KEGG: bur:Bcep18194_A4217 protein of unknown function DUF195 YP_001764363.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_0981 GCN5-related N-acetyltransferase YP_001764364.1 KEGG: bur:Bcep18194_A4219 hypothetical protein YP_001764365.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: bur:Bcep18194_A4220 molybdopterin binding protein YP_001764366.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis YP_001764367.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z YP_001764368.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: bur:Bcep18194_A4223 ribonuclease E and G YP_001764369.1 KEGG: bvi:Bcep1808_1031 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase YP_001764370.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bur:Bcep18194_A4225 phosphatase-like YP_001764371.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bam:Bamb_0990 Rieske (2Fe-2S) domain protein YP_001764372.1 PFAM: peptidase S49; KEGG: bur:Bcep18194_A4227 peptidase S49 YP_001764373.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bur:Bcep18194_A4228 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_001764374.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell YP_001764375.1 PFAM: protein of unknown function DUF177; KEGG: bur:Bcep18194_A4230 protein of unknown function DUF177 YP_001764376.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not YP_001764377.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY YP_001764378.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs YP_001764379.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: bam:Bamb_0998 malonyl CoA-acyl carrier protein transacylase YP_001764380.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_001764381.1 carries the fatty acid chain in fatty acid biosynthesis YP_001764382.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP YP_001764383.1 KEGG: bur:Bcep18194_A4238 hypothetical protein YP_001764384.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response YP_001764385.1 PFAM: Anti sigma-E protein RseA family protein; KEGG: bur:Bcep18194_A4240 anti sigma-E protein, RseA YP_001764386.1 PFAM: MucB/RseB family protein; KEGG: bur:Bcep18194_A4241 sigma E regulatory protein, MucB/RseB YP_001764387.1 KEGG: bur:Bcep18194_A4242 peptidase S1C, Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_001764388.1 PFAM: glutaredoxin 2; KEGG: bur:Bcep18194_A4243 glutaredoxin 2 YP_001764389.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_001764390.1 KEGG: bur:Bcep18194_A4245 peptidase S26A, signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein YP_001764391.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity YP_001764392.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome YP_001764393.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA YP_001764394.1 involved in the de novo synthesis of pyridoxine (Vitamin B6) YP_001764395.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids YP_001764396.1 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides YP_001764397.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bur:Bcep18194_A4252 two component, sigma54 specific, transcriptional regulator, fis family YP_001764398.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA YP_001764399.1 KEGG: bur:Bcep18194_A4254 hypothetical protein YP_001764400.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision YP_001764401.1 KEGG: bur:Bcep18194_A4256 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_001764402.1 KEGG: bam:Bamb_1879 hypothetical protein YP_001764404.1 PFAM: response regulator receiver; KEGG: sus:Acid_2885 multi-sensor signal transduction histidine kinase YP_001764405.1 KEGG: bam:Bamb_1878 hypothetical protein YP_001764406.1 PFAM: terminase GpA; KEGG: bam:Bamb_1877 phage terminase GpA YP_001764407.1 KEGG: bam:Bamb_1876 hypothetical protein YP_001764408.1 PFAM: Integrase catalytic region; KEGG: bmu:Bmul_5758 integrase catalytic region YP_001764409.1 KEGG: bam:Bamb_1846 hypothetical protein YP_001764410.1 PFAM: PAAR repeat-containing protein; KEGG: bam:Bamb_1845 PaaR repeat-containing protein YP_001764411.1 KEGG: bam:Bamb_6400 hypothetical protein YP_001764412.1 KEGG: bam:Bamb_6399 hypothetical protein YP_001764413.1 KEGG: bxe:Bxe_A3351 hypothetical protein YP_001764415.1 KEGG: rme:Rmet_5180 hypothetical protein YP_001764416.1 PFAM: MCP methyltransferase CheR-type; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ret:RHE_PC00054 probable methyltransferase protein YP_001764417.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: reu:Reut_B4445 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001764418.1 PFAM: regulatory protein TetR; KEGG: reu:Reut_B4446 regulatory protein, TetR YP_001764419.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bvi:Bcep1808_1064 GCN5-related N-acetyltransferase YP_001764420.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_A4259 transcriptional regulator, XRE family YP_001764421.1 KEGG: bur:Bcep18194_A4260 hypothetical protein YP_001764422.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: bam:Bamb_1027 methionine aminopeptidase, type I YP_001764423.1 SMART: GAF domain protein; KEGG: bur:Bcep18194_A4262 putative GAF sensor protein YP_001764424.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4263 transcriptional regulator, LysR family YP_001764425.1 PFAM: Pirin domain protein; KEGG: bam:Bamb_1030 pirin domain protein domain protein YP_001764426.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A4265 GCN5-related N-acetyltransferase YP_001764427.1 KEGG: bur:Bcep18194_A4266 membrane protein YP_001764428.1 PFAM: protein of unknown function DUF461; KEGG: bur:Bcep18194_A4267 protein of unknown function DUF461 YP_001764429.1 PFAM: electron transport protein SCO1/SenC; KEGG: bur:Bcep18194_A4268 electron transport protein SCO1/SenC YP_001764430.1 KEGG: bur:Bcep18194_A4269 HAD-superfamily hydrolase subfamily IIB; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase YP_001764431.1 KEGG: bam:Bamb_1036 alpha,alpha-trehalose-phosphate synthase (UDP-forming); TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase family 20 YP_001764432.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A4271 ABC efflux pump, fused ATPase and inner membrane subunits YP_001764433.1 PFAM: glycosyl transferase group 1; KEGG: bur:Bcep18194_A4272 glycosyl transferase, group 1 YP_001764434.1 KEGG: bam:Bamb_1039 hypothetical protein YP_001764435.1 KEGG: bur:Bcep18194_A4274 membrane protein-like YP_001764436.1 TIGRFAM: glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bur:Bcep18194_A4275 mandelate racemase/muconate lactonizing enzyme YP_001764437.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bur:Bcep18194_A4276 transcriptional regulator, GntR family YP_001764438.1 PFAM: Extracellular ligand-binding receptor; KEGG: bur:Bcep18194_A4277 ABC branched chain amino acid family transporter, periplasmic ligand binding protein YP_001764439.1 KEGG: bam:Bamb_1045 phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756 YP_001764440.1 TIGRFAM: pyridoxal kinase; KEGG: bur:Bcep18194_A4279 pyridoxal kinase YP_001764441.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_A4280 alpha/beta hydrolase YP_001764442.1 PFAM: luciferase family protein; KEGG: bur:Bcep18194_A4281 flavin-dependent oxidoreductase YP_001764443.1 TIGRFAM: hopanoid biosynthesis associated glycosyl transferase protein HpnI; PFAM: glycosyl transferase family 2; KEGG: bur:Bcep18194_A4282 glycosyl transferase, family 2 YP_001764444.1 KEGG: bur:Bcep18194_A4283 radical SAM family protein; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnJ; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_001764445.1 TIGRFAM: hopanoid biosynthesis associated protein HpnK; PFAM: YdjC family protein; KEGG: bur:Bcep18194_A4284 YdjC-like protein YP_001764446.1 KEGG: bur:Bcep18194_A4285 hypothetical protein YP_001764447.1 KEGG: bur:Bcep18194_A4286 hypothetical protein YP_001764448.1 KEGG: bvi:Bcep1808_7751 hypothetical protein YP_001764449.1 PFAM: protein of unknown function DUF497; KEGG: ajs:Ajs_3339 protein of unknown function DUF497 YP_001764450.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_1094 polar amino acid ABC transporter, inner membrane subunit YP_001764451.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_1055 polar amino acid ABC transporter, inner membrane subunit YP_001764452.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_1096 ABC transporter related YP_001764453.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_1057 transcriptional regulator, AraC family YP_001764454.1 DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate YP_001764455.1 KEGG: bur:Bcep18194_A4292 arginine N-succinyltransferase; TIGRFAM: arginine/ornithine succinyltransferase subunit; arginine/ornithine succinyltransferase, alpha subunit; PFAM: arginine N-succinyltransferase beta subunit YP_001764456.1 KEGG: bur:Bcep18194_A4293 arginine N-succinyltransferase; TIGRFAM: arginine/ornithine succinyltransferase subunit; arginine N-succinyltransferase; PFAM: arginine N-succinyltransferase beta subunit YP_001764457.1 a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH YP_001764458.1 catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation YP_001764459.1 catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism YP_001764460.1 PFAM: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_A4297 ABC transporter, periplasmic ligand binding protein YP_001764461.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: bur:Bcep18194_A4298 putative signal transduction protein YP_001764462.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: bur:Bcep18194_A4299 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) YP_001764463.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bur:Bcep18194_A4300 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_001764464.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_A4301 NAD-dependent epimerase/dehydratase YP_001764465.1 PFAM: protein of unknown function DUF88; KEGG: bur:Bcep18194_A4302 protein of unknown function DUF88 YP_001764466.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_A4303 glyoxalase/bleomycin resistance protein/dioxygenase YP_001764467.1 PFAM: acriflavin resistance protein; KEGG: bur:Bcep18194_A4304 acriflavin resistance protein YP_001764468.1 PFAM: acriflavin resistance protein; KEGG: bur:Bcep18194_A4305 acriflavin resistance protein YP_001764469.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bur:Bcep18194_A4306 secretion protein HlyD family YP_001764470.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bmu:Bmul_2103 transcriptional regulator, IclR family YP_001764471.1 KEGG: bur:Bcep18194_A4309 phosphatase-like YP_001764472.1 PFAM: Rh family protein/ammonium transporter; KEGG: bvi:Bcep1808_1116 Rh family protein/ammonium transporter YP_001764473.1 KEGG: bur:Bcep18194_A4311 hypothetical protein YP_001764474.1 KEGG: bur:Bcep18194_A4312 hypothetical protein YP_001764475.1 PFAM: protein of unknown function UPF0074; KEGG: bmu:Bmul_2098 transcriptional regulator, BadM/Rrf2 family YP_001764476.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_A4314 NAD-dependent epimerase/dehydratase YP_001764477.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bmu:Bmul_2096 transcriptional regulator, AsnC family YP_001764478.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A4316 ABC spermidine/putrescine transporter, ATPase subunit YP_001764479.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4317 ABC spermidine/putrescine transporter, inner membrane subunit YP_001764480.1 PFAM: extracellular solute-binding protein family 1; KEGG: bur:Bcep18194_A4318 ABC transporter, periplasmic ligand binding protein YP_001764481.1 KEGG: bur:Bcep18194_A4319 hypothetical protein YP_001764482.1 PFAM: amino acid permease-associated region; KEGG: bam:Bamb_1095 amino acid permease-associated region YP_001764483.1 PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: bur:Bcep18194_A4321 protein of unknown function DUF893, YccS/YhfK YP_001764484.1 TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V RecC subunit; KEGG: bur:Bcep18194_A4322 exodeoxyribonuclease V, RecC subunit YP_001764485.1 TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: bur:Bcep18194_A4323 exodeoxyribonuclease V, beta subunit YP_001764486.1 TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: bur:Bcep18194_A4324 exodeoxyribonuclease V, alpha subunit YP_001764487.1 PFAM: Class I peptide chain release factor; KEGG: bvi:Bcep1808_1127 hypothetical protein YP_001764488.1 PFAM: EAL domain protein; KEGG: bur:Bcep18194_A4326 diguanylate phosphodiesterase (EAL domain) YP_001764489.1 PFAM: protein of unknown function DUF6 transmembrane; UAA transporter; KEGG: bur:Bcep18194_A4328 protein of unknown function DUF6, transmembrane YP_001764490.1 KEGG: bur:Bcep18194_A4329 hypothetical protein YP_001764491.1 KEGG: bvi:Bcep1808_1131 17 kDa surface antigen YP_001764492.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine YP_001764493.1 TIGRFAM: pentapeptide MXKDX repeat protein; KEGG: bam:Bamb_1106 hypothetical protein YP_001764494.1 KEGG: bur:Bcep18194_A4333 cytochrome b561 YP_001764495.1 PFAM: oxidoreductase molybdopterin binding; KEGG: bur:Bcep18194_A4334 oxidoreductase, molybdopterin binding YP_001764496.1 PFAM: helix-turn-helix domain protein; KEGG: bur:Bcep18194_A4335 transcriptional regulator, XRE family YP_001764497.1 PFAM: protein of unknown function DUF891; KEGG: bam:Bamb_1110 protein of unknown function DUF891 YP_001764498.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bam:Bamb_1111 protein of unknown function DUF6, transmembrane YP_001764499.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bmu:Bmul_5809 transposase IS116/IS110/IS902 family protein YP_001764500.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4338 major facilitator superfamily (MFS_1) transporter YP_001764501.1 PFAM: metallophosphoesterase; KEGG: bur:Bcep18194_A4339 metallophosphoesterase YP_001764502.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bvi:Bcep1808_1139 ABC transporter related YP_001764503.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4341 ABC spermidine/putrescine transporter, inner membrane subunit YP_001764504.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4342 ABC transporter, inner membrane subunit YP_001764505.1 PFAM: extracellular solute-binding protein family 1; KEGG: bur:Bcep18194_A4343 ABC transporter, periplasmic ligand binding protein YP_001764506.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_A4344 transcriptional regulator, LacI family YP_001764507.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: psa:PST_2128 oxidoreductase, short chain dehydrogenase/reductase family YP_001764508.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_B0501 zinc-containing alcohol dehydrogenase superfamily YP_001764509.1 PFAM: DoxX family protein; KEGG: bur:Bcep18194_B0502 DoxX family membrane protein YP_001764510.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bur:Bcep18194_B0503 NADH-flavin oxidoreductase/NADH oxidase YP_001764511.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0504 transcriptional regulator, LysR family YP_001764512.1 KEGG: bam:Bamb_1122 hypothetical protein YP_001764513.1 PFAM: dehydrogenase E1 component; KEGG: bur:Bcep18194_A4360 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) YP_001764514.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: bur:Bcep18194_A4361 pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) beta subunit YP_001764515.1 PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: bur:Bcep18194_A4362 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_001764516.1 E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide YP_001764517.1 KEGG: bur:Bcep18194_A4377 nucleoside-diphosphate-sugar epimerase-like YP_001764518.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bam:Bamb_1129 permease for cytosine/purines, uracil, thiamine, allantoin YP_001764519.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_A4384 outer membrane protein, (porin) YP_001764520.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4389 transcriptional regulator, LysR family YP_001764521.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4390 major facilitator superfamily (MFS_1) transporter YP_001764522.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide YP_001764523.1 PFAM: histone deacetylase superfamily; KEGG: bur:Bcep18194_A4392 histone deacetylase superfamily YP_001764524.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4398 major facilitator superfamily (MFS_1) transporter YP_001764525.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4399 transcriptional regulator, LysR family YP_001764526.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bur:Bcep18194_A4400 L-serine ammonia-lyase YP_001764527.1 KEGG: bur:Bcep18194_A4401 hypothetical protein YP_001764528.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4402 transcriptional regulator, LysR family YP_001764529.1 PFAM: Integral membrane protein TerC; KEGG: bam:Bamb_1139 integral membrane protein TerC YP_001764530.1 KEGG: bam:Bamb_1140 hypothetical protein YP_001764531.1 PFAM: heat shock protein Hsp20; KEGG: bur:Bcep18194_A4405 heat shock protein HSP20 YP_001764532.1 PFAM: heat shock protein Hsp20; KEGG: bur:Bcep18194_A4406 heat shock protein HSP20 YP_001764533.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bur:Bcep18194_A4407 3-hydroxyacyl-CoA dehydrogenase YP_001764534.1 KEGG: bur:Bcep18194_A4408 hypothetical protein YP_001764535.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_1144 transcriptional regulator, LysR family YP_001764536.1 TIGRFAM: malonate transporter, MadL subunit; PFAM: malonate transporter MadL subunit; KEGG: bur:Bcep18194_A4410 malonate/sodium symporter MadL subunit YP_001764537.1 TIGRFAM: malonate transporter, MadM subunit; PFAM: malonate/sodium symporter MadM subunit; KEGG: bur:Bcep18194_A4411 malonate/sodium symporter MadM subunit YP_001764538.1 TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: bam:Bamb_1147 hypothetical protein YP_001764539.1 acyl carrier protein of malonate decarboxylase YP_001764540.1 The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A YP_001764541.1 TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit; KEGG: bur:Bcep18194_A4415 malonate decarboxylase gamma subunit YP_001764542.1 catalyzes the transfer of 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A to the apo-acyl carrier protein of malonate dehydrogenase to form holo-acyl carrier protein YP_001764543.1 KEGG: bur:Bcep18194_A4417 triphosphoribosyl-dephospho-CoA synthase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB; PFAM: triphosphoribosyl-dephospho-CoA protein YP_001764544.1 KEGG: bur:Bcep18194_A4418 acyl-carrier-protein S-malonyltransferase YP_001764545.1 KEGG: bur:Bcep18194_A4419 hypothetical protein YP_001764546.1 PFAM: phosphoribosyltransferase; KEGG: bur:Bcep18194_A4420 phosphoribosyltransferase YP_001764547.1 PFAM: PHB de-polymerase domain protein; KEGG: bur:Bcep18194_A4421 polyhydroxyalkanoate depolymerase YP_001764548.1 PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_A4422 glutathione S-transferase-like YP_001764549.1 KEGG: bmu:Bmul_2039 hypothetical protein YP_001764550.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4424 major facilitator superfamily (MFS_1) transporter YP_001764551.1 PFAM: protein of unknown function UPF0060; KEGG: bur:Bcep18194_A4425 hypothetical protein YP_001764552.1 3'-5' exonuclease of DNA polymerase III YP_001764553.1 PFAM: ribonuclease H; KEGG: bvi:Bcep1808_1238 ribonuclease H YP_001764554.1 PFAM: Methyltransferase type 11; KEGG: bur:Bcep18194_A4428 hypothetical protein YP_001764555.1 KEGG: bvi:Bcep1808_1240 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein YP_001764556.1 PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; MLTD_N domain protein; KEGG: bur:Bcep18194_A4430 lytic transglycosylase like protein YP_001764557.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4431 major facilitator superfamily (MFS_1) transporter YP_001764558.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers YP_001764559.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bam:Bamb_1168 lysine exporter protein (LysE/YggA) YP_001764560.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity YP_001764561.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus YP_001764562.1 KEGG: bur:Bcep18194_A4436 hypothetical protein YP_001764563.1 PFAM: protein of unknown function UPF0044; KEGG: bur:Bcep18194_A4437 hypothetical protein YP_001764564.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: bur:Bcep18194_A4438 ribosomal RNA methyltransferase RrmJ/FtsJ YP_001764565.1 KEGG: bur:Bcep18194_A4439 peptidase M41, FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; SMART: AAA ATPase YP_001764566.1 KEGG: bur:Bcep18194_A4440 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_001764567.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate YP_001764568.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bam:Bamb_1177 phosphate ABC transporter, periplasmic phosphate-binding protein YP_001764569.1 part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions YP_001764570.1 Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions YP_001764571.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation YP_001764572.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: bmu:Bmul_2016 phosphate uptake regulator, PhoU YP_001764573.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bam:Bamb_1182 two component transcriptional regulator, winged helix family YP_001764574.1 KEGG: bur:Bcep18194_A4449 histidine kinase; TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein YP_001764575.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate YP_001764576.1 PFAM: Ppx/GppA phosphatase; KEGG: bur:Bcep18194_A4451 Ppx/GppA phosphatase YP_001764577.1 KEGG: bur:Bcep18194_A4452 hypothetical protein YP_001764578.1 PFAM: integrase family protein; KEGG: pap:PSPA7_5143 site-specific recombinase, phage integrase family YP_001764580.1 SMART: AAA ATPase; KEGG: bvi:Bcep1808_2461 toprim domain protein YP_001764581.1 PFAM: major capsid protein HK97; KEGG: pap:PSPA7_5150 putative phage-related protein YP_001764582.1 TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97; KEGG: pap:PSPA7_5151 phage prohead protease, HK97 family YP_001764583.1 TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: pap:PSPA7_5152 phage portal protein, HK97 family YP_001764584.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: pap:PSPA7_5153 HNH endonuclease YP_001764585.1 TIGRFAM: phage terminase, small subunit, , P27 family; PFAM: terminase small subunit putative P27; KEGG: cth:Cthe_1723 phage terminase, small subunit, putative, P27 family YP_001764586.1 PFAM: Terminase; KEGG: bca:BCE_0397 phage terminase, large subunit, putative YP_001764587.1 TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: pap:PSPA7_5156 hypothetical protein YP_001764588.1 TIGRFAM: phage head-tail adaptor; PFAM: putative head-tail adaptor protein; KEGG: dvl:Dvul_0865 phage head-tail adaptor, putative YP_001764589.1 TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: bur:Bcep18194_A4453 phosphohistidine phosphatase, SixA YP_001764590.1 KEGG: bur:Bcep18194_A4454 putative hemolysin-like protein YP_001764591.1 KEGG: bur:Bcep18194_A4455 hypothetical protein YP_001764592.1 KEGG: bur:Bcep18194_A4456 hypothetical protein YP_001764593.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bur:Bcep18194_A4457 multi antimicrobial extrusion protein MatE YP_001764594.1 KEGG: bam:Bamb_1200 uncharacterized small conserved protein YP_001764595.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_A4459 AMP-dependent synthetase and ligase YP_001764596.1 PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: bur:Bcep18194_A4460 peptidase M23B YP_001764597.1 PFAM: Aldose 1-epimerase; KEGG: bur:Bcep18194_A4461 aldose 1-epimerase YP_001764598.1 phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell YP_001764599.1 PFAM: CheB methylesterase; MCP methyltransferase CheR-type; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: bmu:Bmul_4696 signal transduction histidine kinase with CheB and CheR activity YP_001764600.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: dar:Daro_1834 TonB-dependent siderophore receptor YP_001764601.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome YP_001764602.1 PFAM: periplasmic binding protein; KEGG: xau:Xaut_2782 periplasmic binding protein YP_001764603.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oan:Oant_3476 ABC transporter related YP_001764604.1 KEGG: eca:ECA1486 ABC transporter ATP-binding protein; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_001764605.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: bpt:Bpet4211 transcriptional regulator, AraC family YP_001764606.1 TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: bur:Bcep18194_A4463 glucosamine-fructose-6-phosphate aminotransferase, isomerising YP_001764607.1 KEGG: bam:Bamb_5480 hypothetical protein YP_001764608.1 KEGG: bam:Bamb_5479 outer membrane protein YP_001764609.1 KEGG: bam:Bamb_5478 hypothetical protein YP_001764610.1 KEGG: bam:Bamb_5477 hypothetical protein YP_001764611.1 KEGG: bam:Bamb_5476 hypothetical protein YP_001764612.1 PFAM: glycosyl transferase family 2; KEGG: bam:Bamb_5475 glycosyl transferase, family 2 YP_001764613.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: bur:Bcep18194_A4466 UDP-N-acetylglucosamine 2-epimerase YP_001764614.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bur:Bcep18194_A4470 ferredoxin/oxidoreductase YP_001764615.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bam:Bamb_1232 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding YP_001764616.1 PFAM: class II aldolase/adducin family protein; KEGG: bur:Bcep18194_A4472 hypothetical protein YP_001764617.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bur:Bcep18194_A4473 acyl-CoA dehydrogenase YP_001764618.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_A4474 zinc-containing alcohol dehydrogenase superfamily YP_001764619.1 PFAM: transcriptional regulator PadR family protein; KEGG: bur:Bcep18194_A4476 transcriptional regulator, PadR-like family YP_001764620.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_A4477 NADH-flavin oxidoreductase/NADH oxidase YP_001764621.1 KEGG: bur:Bcep18194_A4478 hypothetical protein YP_001764622.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bur:Bcep18194_A4484 iron-containing alcohol dehydrogenase YP_001764623.1 PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: bur:Bcep18194_A4485 hypothetical protein YP_001764624.1 PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: bur:Bcep18194_A4486 intradiol ring-cleavage dioxygenase YP_001764625.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4487 transcriptional regulator, LysR family YP_001764626.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bur:Bcep18194_A4489 TonB-dependent siderophore receptor YP_001764627.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A4490 ABC transporter, ATPase subunit YP_001764628.1 PFAM: periplasmic binding protein; KEGG: bur:Bcep18194_A4491 ABC Fe3+ siderophore transporter, periplasmic ligand binding protein YP_001764629.1 PFAM: transport system permease protein; KEGG: bur:Bcep18194_A4492 ABC Fe3+ siderophore transporter, inner membrane subunit YP_001764630.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_A4493 periplasmic sensor signal transduction histidine kinase YP_001764631.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_A4494 two component transcriptional regulator, winged helix family YP_001764632.1 PFAM: MltA-interacting MipA family protein; KEGG: bur:Bcep18194_A4495 MltA-interacting MipA YP_001764633.1 KEGG: bam:Bamb_1238 hypothetical protein YP_001764634.1 PFAM: Lytic transglycosylase catalytic; KEGG: bur:Bcep18194_A4498 lytic transglycosylase, catalytic YP_001764635.1 PFAM: porin Gram-negative type; KEGG: bam:Bamb_1240 porin, gram-negative type YP_001764636.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bur:Bcep18194_A4502 sigma-24 (FecI-like) YP_001764637.1 KEGG: bur:Bcep18194_A4505 hypothetical protein YP_001764638.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4506 transcriptional regulator, LysR family YP_001764639.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_A4507 glyoxalase/bleomycin resistance protein/dioxygenase YP_001764640.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bur:Bcep18194_A4508 flavin reductase-like, FMN-binding YP_001764641.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_1243 transcriptional regulator, LysR family YP_001764642.1 TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: C4-dicarboxylate anaerobic carrier; Citrate transporter; KEGG: bam:Bamb_1244 citrate/H+ symporter, CitMHS family YP_001764643.1 PFAM: protein of unknown function DUF1446; KEGG: bur:Bcep18194_A4511 protein of unknown function DUF1446 YP_001764644.1 KEGG: bur:Bcep18194_A4512 hypothetical protein YP_001764645.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bur:Bcep18194_A4513 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001764646.1 KEGG: bur:Bcep18194_A4516 hypothetical protein YP_001764647.1 PFAM: phosphatidate cytidylyltransferase; KEGG: bur:Bcep18194_A4517 phosphatidate cytidylyltransferase YP_001764648.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: bur:Bcep18194_A4518 phospholipid/glycerol acyltransferase YP_001764649.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bam:Bamb_1252 CDP-alcohol phosphatidyltransferase YP_001764650.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_A4520 alpha/beta hydrolase YP_001764651.1 PFAM: Dual specificity protein phosphatase; KEGG: bur:Bcep18194_A4521 dual specificity protein phosphatase YP_001764652.1 KEGG: bur:Bcep18194_A4522 hypothetical protein YP_001764653.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: bur:Bcep18194_A4523 diguanylate cyclase (GGDEF domain) YP_001764654.1 binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP) YP_001764655.1 catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans YP_001764656.1 PFAM: TPR repeat-containing protein; cellulose synthase operon C domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_A4527 cellulose synthase operon C-like protein YP_001764657.1 KEGG: bur:Bcep18194_A4528 hypothetical protein YP_001764658.1 KEGG: bvi:Bcep1808_1353 hypothetical protein YP_001764659.1 KEGG: bur:Bcep18194_A4529 ATPase involved in chromosome partitioning-like YP_001764660.1 KEGG: bur:Bcep18194_A4530 cellulose synthase (UDP-forming); TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ YP_001764661.1 TIGRFAM: cellulose synthase operon protein YhjU; KEGG: bur:Bcep18194_A4531 hypothetical protein YP_001764662.1 KEGG: bam:Bamb_1265 hypothetical protein YP_001764663.1 KEGG: bur:Bcep18194_C6807 hypothetical protein YP_001764664.1 PFAM: Pirin domain protein; KEGG: bur:Bcep18194_A4532 pirin-like protein YP_001764665.1 PFAM: OsmC family protein; KEGG: bam:Bamb_1267 OsmC family protein YP_001764666.1 PFAM: sodium/hydrogen exchanger; KEGG: bam:Bamb_1268 sodium/hydrogen exchanger YP_001764667.1 PFAM: protein of unknown function DUF1427; KEGG: bur:Bcep18194_A4535 hypothetical protein YP_001764668.1 PFAM: isochorismatase hydrolase; KEGG: bam:Bamb_5810 isochorismatase hydrolase YP_001764669.1 PFAM: regulatory protein LysR; helix-turn-helix Fis-type; LysR substrate-binding; KEGG: bur:Bcep18194_A4537 transcriptional regulator, LysR family YP_001764670.1 KEGG: bur:Bcep18194_A4538 hypothetical protein YP_001764671.1 PFAM: Amidohydrolase 3; KEGG: bur:Bcep18194_A4539 metal-dependent hydrolase YP_001764672.1 PFAM: DoxX family protein; KEGG: bur:Bcep18194_A4540 membrane protein, DoxX YP_001764673.1 KEGG: bam:Bamb_1275 hypothetical protein YP_001764674.1 PFAM: protein of unknown function DUF1275; KEGG: bur:Bcep18194_A4542 protein of unknown function DUF1275 YP_001764675.1 KEGG: bam:Bamb_1277 hypothetical protein YP_001764676.1 TIGRFAM: acid phosphatase; PFAM: phosphoesterase; KEGG: bvi:Bcep1808_1365 phosphoesterase YP_001764677.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: bvi:Bcep1808_1366 di-haem cytochrome c peroxidase YP_001764678.1 KEGG: bur:Bcep18194_A4547 hypothetical protein YP_001764679.1 PFAM: NUDIX hydrolase; KEGG: bam:Bamb_1281 NUDIX hydrolase YP_001764680.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001764681.1 KEGG: bvi:Bcep1808_1370 hypothetical protein YP_001764682.1 PFAM: protein of unknown function DUF1234; KEGG: bvi:Bcep1808_1371 protein of unknown function DUF1234 YP_001764683.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_A4552 L-carnitine dehydratase/bile acid-inducible protein F YP_001764684.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001764685.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4554 transcriptional regulator, LysR family YP_001764686.1 PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4555 hypothetical protein YP_001764687.1 PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A4556 NUDIX hydrolase YP_001764688.1 PFAM: thioesterase superfamily protein; KEGG: bur:Bcep18194_A4557 thioesterase superfamily YP_001764689.1 PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A4558 ABC branched chain amino acid family transporter, inner membrane subunit YP_001764690.1 PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A4559 ABC branched chain amino acid family transporter, inner membrane subunit YP_001764691.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A4560 ABC branched chain amino acid family transporter, ATPase subunit YP_001764692.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_1297 ABC transporter related YP_001764693.1 PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: bur:Bcep18194_A4562 short-chain dehydrogenase/reductase SDR YP_001764694.1 PFAM: protein of unknown function DUF336; KEGG: bur:Bcep18194_A4563 hypothetical protein YP_001764695.1 PFAM: Myo-inositol catabolism IolB domain protein; KEGG: bam:Bamb_1300 myo-inositol catabolism IolB domain protein YP_001764696.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bur:Bcep18194_A4565 xylose isomerase-like TIM barrel YP_001764697.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bur:Bcep18194_A4566 acetolactate synthase YP_001764698.1 PFAM: PfkB domain protein; KEGG: bur:Bcep18194_A4567 PfkB family carbohydrate kinase YP_001764699.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_A4568 ABC sugar transporter, periplasmic ligand binding protein YP_001764700.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_1305 ABC transporter related YP_001764701.1 PFAM: inner-membrane translocator; KEGG: bam:Bamb_1306 inner-membrane translocator YP_001764702.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bur:Bcep18194_A4571 xylose isomerase-like TIM barrel YP_001764703.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bvi:Bcep1808_1391 inositol 2-dehydrogenase YP_001764704.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bur:Bcep18194_A4573 xylose isomerase-like TIM barrel YP_001764705.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bur:Bcep18194_A4574 oxidoreductase-like YP_001764706.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bur:Bcep18194_A4575 transcriptional regulator, RpiR family YP_001764707.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_1312 methylmalonate-semialdehyde dehydrogenase YP_001764708.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_1313 transcriptional regulator, LysR family YP_001764709.1 PFAM: SirA family protein; KEGG: bur:Bcep18194_A4578 SirA-like protein YP_001764710.1 KEGG: bur:Bcep18194_A4579 hypothetical protein YP_001764711.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_A4580 two component transcriptional regulator, winged helix family YP_001764712.1 PFAM: Peptidoglycan-binding LysM; KEGG: bur:Bcep18194_A4581 peptidoglycan-binding LysM YP_001764713.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE2 domain protein; KEGG: bur:Bcep18194_A4582 periplasmic sensor signal transduction histidine kinase YP_001764714.1 KEGG: bur:Bcep18194_A4583 hypothetical protein YP_001764715.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: bmu:Bmul_1875 UTP-glucose-1-phosphate uridylyltransferase YP_001764716.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain YP_001764717.1 PFAM: UvrD/REP helicase; KEGG: bur:Bcep18194_A4586 UvrD/REP helicase YP_001764718.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine YP_001764719.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4588 major facilitator superfamily (MFS_1) transporter YP_001764720.1 PFAM: chemotaxis sensory transducer; KEGG: bur:Bcep18194_A4589 methyl-accepting chemotaxis sensory transducer YP_001764721.1 PFAM: secretion protein HlyD family protein; KEGG: bur:Bcep18194_A4591 secretion protein HlyD family YP_001764722.1 PFAM: protein of unknown function DUF1656; KEGG: bur:Bcep18194_A4592 protein of unknown function DUF1656 YP_001764723.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: bur:Bcep18194_A4593 fusaric acid resistance protein YP_001764724.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bam:Bamb_1331 RND efflux system, outer membrane lipoprotein, NodT family YP_001764725.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4595 transcriptional regulator, LysR family YP_001764726.1 KEGG: bmu:Bmul_1864 hypothetical protein YP_001764727.1 PFAM: metallophosphoesterase; KEGG: bur:Bcep18194_A4597 metallophosphoesterase YP_001764728.1 PFAM: FAD linked oxidase domain protein; KEGG: bur:Bcep18194_A4598 FAD linked oxidase-like YP_001764729.1 KEGG: bur:Bcep18194_A4599 membrane protein YP_001764730.1 TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; KEGG: bur:Bcep18194_A4600 flavodoxin/nitric oxide synthase YP_001764731.1 PFAM: ribonuclease BN; KEGG: bur:Bcep18194_A4601 ribonuclease BN YP_001764732.1 KEGG: bur:Bcep18194_A4602 membrane protein YP_001764733.1 PFAM: CBS domain containing protein; KEGG: bur:Bcep18194_A4603 putative transcriptional regulator, XRE family YP_001764734.1 PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4604 major facilitator superfamily (MFS_1) transporter and phospholipid/glycerol acyltransferase YP_001764735.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_001764736.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: bur:Bcep18194_A4606 electron-transferring-flavoprotein dehydrogenase YP_001764737.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_A4607 short chain dehydrogenase YP_001764738.1 PFAM: thioesterase superfamily protein; KEGG: bam:Bamb_1348 thioesterase superfamily protein YP_001764739.1 KEGG: bur:Bcep18194_A4609 transcriptional regulator, LuxR family; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_001764740.1 KEGG: bvi:Bcep1808_1430 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase YP_001764741.1 KEGG: bur:Bcep18194_A4611 3-oxoacid CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase YP_001764742.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bvi:Bcep1808_1432 short chain dehydrogenase YP_001764743.1 PFAM: polysaccharide deacetylase; KEGG: bvi:Bcep1808_1433 polysaccharide deacetylase YP_001764744.1 PFAM: protein of unknown function DUF1486; KEGG: bvi:Bcep1808_1434 protein of unknown function DUF1486 YP_001764745.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_1355 transcriptional regulator, LysR family YP_001764746.1 PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_1356 alpha/beta hydrolase fold YP_001764747.1 PFAM: Endoribonuclease L-PSP; KEGG: bam:Bamb_1357 endoribonuclease L-PSP YP_001764748.1 KEGG: bur:Bcep18194_A4614 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; RelA/SpoT domain protein YP_001764749.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) YP_001764750.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: bur:Bcep18194_A4616 initiation factor 3 YP_001764751.1 PFAM: ribosomal protein L35; KEGG: bte:BTH_I2593 ribosomal protein L35 YP_001764752.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit YP_001764753.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily YP_001764754.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily YP_001764755.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control YP_001764756.1 PFAM: regulatory protein MerR; KEGG: bur:Bcep18194_A4622 transcriptional regulator, MerR family YP_001764757.1 PFAM: protein of unknown function DUF811; KEGG: bur:Bcep18194_A4623 hypothetical protein YP_001764758.1 KEGG: bur:Bcep18194_A4625 hypothetical protein YP_001764759.1 KEGG: bur:Bcep18194_A4626 uncharacterized lipoprotein-like YP_001764760.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bur:Bcep18194_A4628 antibiotic biosynthesis monooxygenase YP_001764761.1 KEGG: bur:Bcep18194_A4629 hypothetical protein YP_001764762.1 KEGG: bur:Bcep18194_A4630 hypothetical protein YP_001764763.1 PFAM: protein of unknown function DUF218; KEGG: bmu:Bmul_1765 protein of unknown function DUF218 YP_001764764.1 KEGG: bur:Bcep18194_A4632 hypothetical protein YP_001764765.1 KEGG: bur:Bcep18194_A4633 hypothetical protein YP_001764766.1 KEGG: bam:Bamb_1375 hypothetical protein YP_001764767.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_1376 transcriptional regulator, LysR family YP_001764768.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate YP_001764769.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: bur:Bcep18194_A4637 putative transcriptional regulator YP_001764770.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: bur:Bcep18194_A4638 pseudouridine synthase, Rsu YP_001764771.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins YP_001764772.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination YP_001764773.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex YP_001764774.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock YP_001764775.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs YP_001764776.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4644 drug resistance transporter EmrB/QacA subfamily YP_001764777.1 PFAM: secretion protein HlyD family protein; KEGG: bur:Bcep18194_A4645 secretion protein HlyD family YP_001764778.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_A4646 RND efflux system, outer membrane lipoprotein, NodT family YP_001764779.1 PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_A4647 transcriptional regulator, MarR family YP_001764780.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: bur:Bcep18194_A4648 GTP-binding protein TypA YP_001764781.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide YP_001764782.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA YP_001764783.1 E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide YP_001764784.1 PFAM: AFG1-family ATPase; KEGG: bam:Bamb_1393 AFG1-family ATPase YP_001764785.1 KEGG: bur:Bcep18194_A4653 hypothetical protein YP_001764786.1 KEGG: bur:Bcep18194_A4654 hypothetical protein YP_001764787.1 PFAM: Polypeptide-transport-associated domain protein ShlB-type; KEGG: bur:Bcep18194_A4655 hemolysin activation/secretion protein YP_001764788.1 KEGG: bur:Bcep18194_A4656 hypothetical protein YP_001764789.1 PFAM: Collagen triple helix repeat; KEGG: bur:Bcep18194_A4657 hypothetical protein YP_001764790.1 PFAM: Flp/Fap pilin component; KEGG: bam:Bamb_1399 Flp/Fap pilin component YP_001764791.1 PFAM: peptidase A24A prepilin type IV; KEGG: bur:Bcep18194_A4658 peptidase A24A, prepilin type IV YP_001764792.1 PFAM: TadE family protein; KEGG: bur:Bcep18194_A4659 Flp pilus assembly protein TadG YP_001764793.1 TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: bur:Bcep18194_A4660 Flp pilus assembly CpaB YP_001764794.1 PFAM: type II and III secretion system protein; KEGG: bur:Bcep18194_A4661 Flp pilus assembly protein secretin CpaC YP_001764795.1 KEGG: bur:Bcep18194_A4662 response regulator receiver domain protein (CheY-like) YP_001764796.1 PFAM: type II secretion system protein E; KEGG: bur:Bcep18194_A4663 Flp pilus assembly protein ATPase CpaF YP_001764797.1 PFAM: type II secretion system protein; KEGG: bur:Bcep18194_A4664 Flp pilus assembly protein TadB YP_001764798.1 PFAM: type II secretion system protein; KEGG: bur:Bcep18194_A4665 Flp pilus assembly protein TadC YP_001764799.1 PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_A4666 Flp pilus assembly protein TadD contains TPRrepeats YP_001764800.1 KEGG: bur:Bcep18194_A4667 hypothetical protein YP_001764801.1 KEGG: bur:Bcep18194_A4668 membrane protein YP_001764802.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bvi:Bcep1808_1495 sigma54 specific transcriptional regulator, fis family YP_001764803.1 KEGG: bur:Bcep18194_A4670 hypothetical protein YP_001764804.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: bur:Bcep18194_A4671 host factor Hfq YP_001764805.1 KEGG: bur:Bcep18194_A4672 hypothetical protein YP_001764806.1 KEGG: bur:Bcep18194_A4673 hypothetical protein YP_001764807.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_A4674 AMP-dependent synthetase and ligase YP_001764808.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_A4675 transcriptional regulator, TetR family YP_001764809.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4676 major facilitator superfamily (MFS_1) transporter YP_001764810.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A4677 GCN5-related N-acetyltransferase YP_001764811.1 PFAM: Putative ParB-like nuclease; KEGG: bvi:Bcep1808_1504 hypothetical protein YP_001764812.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bur:Bcep18194_A4679 sulfate transporter/antisigma-factor antagonist STAS YP_001764813.1 PFAM: PfkB domain protein; KEGG: bur:Bcep18194_A4680 PfkB, ribokinase family YP_001764814.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bvi:Bcep1808_1506 periplasmic binding protein/LacI transcriptional regulator YP_001764815.1 PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A4682 ABC sugar transporter, inner membrane subunit YP_001764816.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_1508 ABC transporter related YP_001764817.1 PFAM: ROK family protein; KEGG: bur:Bcep18194_A4684 ROK family protein YP_001764818.1 KEGG: bur:Bcep18194_A4685 ABC transporter, substrate-binding protein, aliphatic sulphonates; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3 YP_001764819.1 KEGG: bur:Bcep18194_A4688 3'-5' exoribonuclease, VacB and RNase II/ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; SMART: Cold shock protein YP_001764820.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: bur:Bcep18194_A4689 RNA methyltransferase TrmH, group 3 YP_001764821.1 PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: bur:Bcep18194_A4690 negative regulator of AmpC, AmpD YP_001764822.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway YP_001764823.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bam:Bamb_1451 GntR domain protein YP_001764824.1 PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; KEGG: bur:Bcep18194_A4693 oxidoreductase YP_001764825.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4694 ABC polar amino acid transporter, inner membrane subunit YP_001764826.1 PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: bvi:Bcep1808_1517 extracellular solute-binding protein, family 3 YP_001764827.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors YP_001764828.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate YP_001764829.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys YP_001764830.1 PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A4699 NUDIX hydrolase YP_001764831.1 PFAM: protein of unknown function DUF336; KEGG: bur:Bcep18194_A4700 hypothetical protein YP_001764832.1 PFAM: small multidrug resistance protein; KEGG: bur:Bcep18194_A4701 small multidrug resistance protein YP_001764833.1 catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA YP_001764834.1 KEGG: bur:Bcep18194_A4703 hypothetical protein YP_001764835.1 catalyzes the release of sulfite from alkanesulfonates YP_001764836.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4705 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein YP_001764837.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A4706 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit YP_001764838.1 PFAM: TOBE domain protein; KEGG: bam:Bamb_1466 molybdenum-pterin binding YP_001764839.1 KEGG: bur:Bcep18194_A4708 hypothetical protein YP_001764840.1 KEGG: bur:Bcep18194_A4709 hypothetical protein YP_001764841.1 TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: bur:Bcep18194_A4710 tRNA-dihydrouridine synthase A YP_001764842.1 KEGG: aav:Aave_1734 phage integrase family protein YP_001764843.1 KEGG: bvi:Bcep1808_4494 hypothetical protein YP_001764844.1 PFAM: Curculin domain protein (mannose-binding) lectin; KEGG: art:Arth_4524 curculin domain protein (mannose-binding) lectin YP_001764845.1 PFAM: Curculin domain protein (mannose-binding) lectin; KEGG: art:Arth_4524 curculin domain protein (mannose-binding) lectin YP_001764846.1 KEGG: swi:Swit_3966 hypothetical protein YP_001764848.1 KEGG: gox:GOX1227 hypothetical protein YP_001764849.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A4712 GCN5-related N-acetyltransferase YP_001764850.1 KEGG: bur:Bcep18194_A4713 hypothetical protein YP_001764851.1 PFAM: protein of unknown function DUF1260; KEGG: bur:Bcep18194_A4716 hypothetical protein YP_001764852.1 KEGG: bur:Bcep18194_A4718 hypothetical protein YP_001764853.1 KEGG: bam:Bamb_1476 hypothetical protein YP_001764854.1 KEGG: bur:Bcep18194_A4720 hypothetical protein YP_001764855.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_A4721 glyoxalase/bleomycin resistance protein/dioxygenase YP_001764856.1 KEGG: bam:Bamb_1480 hypothetical protein YP_001764857.1 KEGG: bur:Bcep18194_A4723 phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthase like enzyme YP_001764858.1 PFAM: helix-turn-helix HxlR type; KEGG: bur:Bcep18194_A4724 putative transcriptional regulator YP_001764859.1 PFAM: thioesterase superfamily protein; KEGG: bur:Bcep18194_A4725 phenylacetic acid degradation-related protein YP_001764860.1 PFAM: aldo/keto reductase; KEGG: bam:Bamb_1484 aldo/keto reductase YP_001764861.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4727 major facilitator superfamily (MFS_1) transporter YP_001764862.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bur:Bcep18194_A4728 hypothetical protein YP_001764863.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4729 transcriptional regulator, LysR family YP_001764864.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA YP_001764865.1 PFAM: permease; KEGG: bur:Bcep18194_A4731 putative transporter YP_001764866.1 KEGG: bur:Bcep18194_A4732 hypothetical protein YP_001764867.1 TIGRFAM: ABC-2 type transporter, NodJ family; PFAM: ABC-2 type transporter; KEGG: bur:Bcep18194_A4733 ABC efflux pump, inner membrane subunit, NodJ YP_001764868.1 involved in the export of lipooligosaccharides during nodulation YP_001764869.1 PFAM: UspA domain protein; KEGG: bur:Bcep18194_A4735 universal stress protein, UspA family YP_001764870.1 KEGG: bur:Bcep18194_A4736 hypothetical protein YP_001764871.1 KEGG: bur:Bcep18194_A4737 hypothetical protein YP_001764872.1 Represses a number of genes involved in the response to DNA damage YP_001764873.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bur:Bcep18194_A4739 thiosulphate-binding protein YP_001764874.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4740 sulfate ABC transporter, inner membrane subunit CysT YP_001764875.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4741 sulfate ABC transporter, inner membrane subunit CysW YP_001764876.1 KEGG: bur:Bcep18194_A4742 ABC sulfate transporter, ATPase subunit; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase YP_001764877.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4743 transcriptional regulator CysB-like protein YP_001764878.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_A4745 ABC sugar transporter, periplasmic ligand binding protein YP_001764879.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A4746 ABC sugar transporter, ATPase subunit YP_001764880.1 PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A4747 ABC sugar transporter, inner membrane subunit YP_001764881.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_A4748 transcriptional regulator, LacI family YP_001764882.1 TIGRFAM: ribokinase; PFAM: PfkB domain protein; Phosphomethylpyrimidine kinase type-1; KEGG: bam:Bamb_1507 ribokinase YP_001764883.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bam:Bamb_1508 methyl-accepting chemotaxis sensory transducer YP_001764884.1 PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: bvi:Bcep1808_1564 putative serine protein kinase, PrkA YP_001764885.1 PFAM: protein of unknown function DUF444; KEGG: bmu:Bmul_1624 protein of unknown function DUF444 YP_001764886.1 PFAM: SpoVR family protein; KEGG: bur:Bcep18194_A4753 hypothetical protein YP_001764887.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4754 citrate-proton symporter, (MFS_1) YP_001764888.1 PFAM: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_A4762 ABC amino acid transporter, periplasmic ligand binding protein YP_001764889.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4763 ABC polar amino acid transporter, inner membrane subunit YP_001764890.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4764 ABC polar amino acid transporter, inner membrane subunit YP_001764891.1 PFAM: peptidase M23B; KEGG: bur:Bcep18194_A4765 peptidase M23B YP_001764892.1 PFAM: regulatory protein TetR; Tetracycline transcriptional repressor MAATS-type domain protein; KEGG: bur:Bcep18194_A4766 transcriptional regulator, TetR family YP_001764893.1 MexX; AmrA; involved in resistance to antibiotics; periplasmic membrane fusion protein; functions along with MexY and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery YP_001764894.1 MexY; AmrB; involved in resistance to antibiotics; inner membrane protein; belongs to RND (resistance, nodulation, cell division) family of transporters; functions along with MexX and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery YP_001764895.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_A4769 RND efflux system, outer membrane lipoprotein, NodT family YP_001764896.1 PFAM: Fimbrial protein; KEGG: bam:Bamb_1523 fimbrial protein YP_001764897.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: bam:Bamb_1524 fimbrial biogenesis outer membrane usher protein YP_001764898.1 PFAM: pili assembly chaperone; KEGG: bur:Bcep18194_A4773 pili assembly chaperone YP_001764899.1 KEGG: bam:Bamb_1526 fimbrial protein YP_001764900.1 KEGG: bam:Bamb_1527 hypothetical protein YP_001764901.1 KEGG: bam:Bamb_1528 hypothetical protein YP_001764902.1 RNA polymerase sigma factor involved in the synthesis of the siderophores pyoverdine in Pseudomonas and malleobactin in Burkholderia; also involved in the synthesis of exotoxin and PrpL protease YP_001764903.1 PFAM: MbtH domain protein; KEGG: bur:Bcep18194_A4779 MbtH-like protein YP_001764904.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bur:Bcep18194_A4780 hypothetical protein YP_001764905.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A4781 ABC cobalamin/Fe3+-siderophore transporter, ATPase subunit YP_001764906.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome YP_001764907.1 PFAM: ferric iron reductase; KEGG: bam:Bamb_1534 ferric iron reductase YP_001764908.1 PFAM: periplasmic binding protein; KEGG: bur:Bcep18194_A4784 ABC Fe3+-siderophore transporter, periplasmic ligand binding protein YP_001764909.1 KEGG: bur:Bcep18194_A4785 ABC cyclic peptide/siderophore export pump, fused ATPase and inner membrane subunits; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_001764910.1 TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: bur:Bcep18194_A4786 non-ribosomal peptide synthase YP_001764911.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: bur:Bcep18194_A4787 amino acid adenylation YP_001764912.1 KEGG: bur:Bcep18194_A4788 hypothetical protein YP_001764913.1 KEGG: bam:Bamb_1540 lysine/ornithine N-monooxygenase YP_001764914.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bur:Bcep18194_A4790 TonB-dependent siderophore receptor YP_001764915.1 KEGG: bam:Bamb_1542 folate-dependent phosphoribosylglycinamide formyltransferase PurN-like protein YP_001764916.1 KEGG: bur:Bcep18194_A4792 hypothetical protein YP_001764917.1 KEGG: bam:Bamb_1548 hypothetical protein YP_001764918.1 KEGG: bam:Bamb_1549 hypothetical protein YP_001764919.1 KEGG: bur:Bcep18194_A4797 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001764920.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid YP_001764921.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide YP_001764922.1 catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3 YP_001764923.1 catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1 YP_001764924.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pfl:PFL_0310 outer membrane ferric siderophore receptor, putative YP_001764925.1 TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bur:Bcep18194_A4805 cobalamin synthesis protein/P47K YP_001764926.1 with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism YP_001764927.1 KEGG: bur:Bcep18194_A4807 magnesium chelatase, ChlI subunit; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001764928.1 KEGG: bur:Bcep18194_A4808 Mg-chelatase subunit ChlD-like YP_001764929.1 PFAM: protein of unknown function DUF188; KEGG: bur:Bcep18194_A4809 protein of unknown function DUF188 YP_001764930.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_A5809 TPR repeat protein YP_001764931.1 KEGG: bur:Bcep18194_A4810 hypothetical protein YP_001764932.1 SMART: low molecular weight phosphotyrosine protein phosphatase; KEGG: bur:Bcep18194_A4811 low molecular weight phosphotyrosine protein phosphatase YP_001764933.1 PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A4812 NUDIX hydrolase YP_001764934.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_A4814 L-carnitine dehydratase/bile acid-inducible protein F YP_001764935.1 TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: Citrate transporter; KEGG: bam:Bamb_1566 citrate/H+ symporter, CitMHS family YP_001764936.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bam:Bamb_1567 acyl-CoA dehydrogenase domain protein YP_001764937.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bur:Bcep18194_A4817 transcriptional regulator, IclR family YP_001764938.1 PFAM: Carbohydrate-binding family V/XII; KEGG: bur:Bcep18194_A4818 chitinase YP_001764939.1 TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: bur:Bcep18194_A4821 precorrin-3B C17-methyltransferase region YP_001764940.1 catalyzes the formation of precorrin-3 from precorrin-2 YP_001764941.1 catalyzes the interconversion of precorrin-8X and hydrogenobyrinate YP_001764942.1 TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: bur:Bcep18194_A4824 nitrite/sulfite reductase, hemoprotein beta subunit YP_001764943.1 KEGG: bur:Bcep18194_A4826 precorrin-6y C5,15-methyltransferase, CbiE/CbiT; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_001764944.1 Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A YP_001764945.1 CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6 YP_001764946.1 KEGG: bur:Bcep18194_A4829 precorrin-4 C11-methyltransferase region; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_001764947.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4832 major facilitator superfamily (MFS_1) transporter YP_001764948.1 PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_A4833 transcriptional regulator, MarR family YP_001764949.1 PFAM: Ion transport 2 domain protein; KEGG: hal:VNG1847G PchA YP_001764950.1 PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_A4836 glutathione S-transferase-like YP_001764951.1 PFAM: extracellular solute-binding protein family 1; KEGG: bur:Bcep18194_A4845 ABC transporter, periplasmic ligand binding protein YP_001764952.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_A4846 ABC transporter, ATPase subunit YP_001764953.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_1592 binding-protein-dependent transport systems inner membrane component YP_001764954.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4848 ABC transporter, inner membrane subunit YP_001764955.1 KEGG: bur:Bcep18194_A4849 hypothetical protein YP_001764956.1 KEGG: bur:Bcep18194_A4850 hypothetical protein YP_001764957.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bur:Bcep18194_A4851 D-isomer specific 2-hydroxyacid dehydrogenase YP_001764958.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bam:Bamb_1599 L-carnitine dehydratase/bile acid-inducible protein F YP_001764959.1 PFAM: pyruvate carboxyltransferase; KEGG: bur:Bcep18194_A4853 pyruvate carboxyltransferase YP_001764960.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bam:Bamb_1601 glyoxalase/bleomycin resistance protein/dioxygenase YP_001764961.1 KEGG: bur:Bcep18194_A4855 esterase/lipase-like protein YP_001764962.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4856 transcriptional regulator, LysR family YP_001764963.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4860 major facilitator superfamily (MFS_1) transporter YP_001764964.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bur:Bcep18194_A4872 glutathione-dependent formaldehyde-activating, GFA YP_001764966.1 PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_A4873 transcriptional regulator, MarR family YP_001764967.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A4874 GCN5-related N-acetyltransferase YP_001764968.1 KEGG: bam:Bamb_1610 hypothetical protein YP_001764969.1 KEGG: bur:Bcep18194_A4881 hypothetical protein YP_001764970.1 PFAM: OsmC family protein; KEGG: bur:Bcep18194_A4882 OsmC-like protein YP_001764971.1 KEGG: bam:Bamb_1120 hypothetical protein YP_001764972.1 PFAM: Integrase catalytic region; KEGG: bam:Bamb_6516 integrase, catalytic region YP_001764973.1 KEGG: bvi:Bcep1808_6364 hypothetical protein YP_001764974.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: bxe:Bxe_C0542 transcriptional regulator, Crp/Fnr family YP_001764976.1 KEGG: bpt:Bpet2597 hypothetical protein YP_001764977.1 KEGG: bxe:Bxe_A3822 hypothetical protein YP_001764978.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: bxe:Bxe_C0542 transcriptional regulator, Crp/Fnr family YP_001764980.1 PFAM: protein of unknown function UPF0118; KEGG: gur:Gura_2633 protein of unknown function UPF0118 YP_001764982.1 PFAM: CsbD family protein; KEGG: bxe:Bxe_A3352 hypothetical protein YP_001764983.1 PFAM: PRC-barrel domain protein; KEGG: bxe:Bxe_B2570 hypothetical protein YP_001764984.1 PFAM: natural resistance-associated macrophage protein; KEGG: bmu:Bmul_3999 natural resistance-associated macrophage protein YP_001764985.1 KEGG: bxe:Bxe_A3821 hypothetical protein YP_001764986.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: bxe:Bxe_C0542 transcriptional regulator, Crp/Fnr family YP_001764988.1 KEGG: bxe:Bxe_A1989 hypothetical protein YP_001764990.1 KEGG: bxe:Bxe_C0556 hypothetical protein YP_001764991.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: pna:Pnap_4499 transketolase YP_001764992.1 PFAM: sodium/hydrogen exchanger; KEGG: bpl:BURPS1106A_A2986 transporter, monovalent cation:proton antiporter-2 (CPA2) family YP_001764993.1 KEGG: asa:ASA_4168 hypothetical protein YP_001764995.1 KEGG: bxe:Bxe_B2044 hypothetical protein YP_001764996.1 KEGG: reu:Reut_A1643 hypothetical protein YP_001764997.1 KEGG: bxe:Bxe_A3821 hypothetical protein YP_001764998.1 PFAM: CsbD family protein; KEGG: mpt:Mpe_A3663 hypothetical protein YP_001764999.1 KEGG: bxe:Bxe_B0247 hypothetical protein YP_001765001.1 PFAM: fatty acid desaturase; KEGG: bxe:Bxe_B2641 fatty acid desaturase YP_001765002.1 PFAM: 17 kDa surface antigen; KEGG: har:HEAR2625 lipoprotein, osmotically inducible YP_001765003.1 PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: bxe:Bxe_B1517 putative cyclic beta 1-2 glucan synthetase YP_001765004.1 KEGG: bpa:BPP2077 hypothetical protein YP_001765005.1 PFAM: band 7 protein; KEGG: bxe:Bxe_C0544 hypothetical protein YP_001765006.1 KEGG: azc:AZC_0688 hypothetical protein YP_001765007.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_3337 transcriptional regulator, LysR family YP_001765008.1 PFAM: beta-lactamase domain protein; KEGG: rpa:RPA2488 hypothetical protein YP_001765009.1 KEGG: xac:XAC3770 hypothetical protein YP_001765010.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bxe:Bxe_A2994 TonB-dependent receptor YP_001765011.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bur:Bcep18194_A4995 hydrophobe/amphiphile efflux-1 pump, HAE1 YP_001765012.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_A4998 ABC transporter, ATPase subunit YP_001765013.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_4954 binding-protein-dependent transport systems inner membrane component YP_001765014.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_4953 binding-protein-dependent transport systems inner membrane component YP_001765015.1 PFAM: extracellular solute-binding protein family 5; KEGG: bvi:Bcep1808_4952 extracellular solute-binding protein, family 5 YP_001765016.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bvi:Bcep1808_4951 TonB-dependent receptor YP_001765017.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bvi:Bcep1808_4950 transcriptional regulator, XRE family YP_001765018.1 KEGG: bvi:Bcep1808_4949 hypothetical protein YP_001765019.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bvi:Bcep1808_4948 biopolymer transport protein ExbD/TolR YP_001765020.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bvi:Bcep1808_4947 biopolymer transport protein ExbD/TolR YP_001765021.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bvi:Bcep1808_4946 MotA/TolQ/ExbB proton channel YP_001765022.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: bvi:Bcep1808_4945 TonB family protein YP_001765023.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bmu:Bmul_1541 YbaK/prolyl-tRNA synthetase associated region YP_001765024.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity YP_001765025.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: bvi:Bcep1808_1666 magnesium and cobalt transport protein CorA YP_001765026.1 KEGG: bam:Bamb_1644 hypothetical protein YP_001765027.1 PFAM: TrkA-N domain protein; Saccharopine dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bam:Bamb_1645 saccharopine dehydrogenase YP_001765028.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bur:Bcep18194_A5021 transcriptional regulator, AsnC family YP_001765029.1 KEGG: bur:Bcep18194_A5022 hypothetical protein YP_001765030.1 KEGG: bur:Bcep18194_A5023 hypothetical protein YP_001765031.1 KEGG: bam:Bamb_1649 hypothetical protein YP_001765032.1 KEGG: bur:Bcep18194_A5025 membrane protein YP_001765033.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bam:Bamb_1651 transcriptional regulator, LacI family YP_001765034.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bam:Bamb_1652 gluconate 2-dehydrogenase YP_001765035.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_1653 major facilitator superfamily MFS_1 YP_001765036.1 PFAM: PfkB domain protein; KEGG: bam:Bamb_1654 PfkB domain protein YP_001765037.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bur:Bcep18194_A5030 xylose isomerase-like TIM barrel YP_001765038.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_1656 transcriptional regulator, LysR family YP_001765039.1 PFAM: conserved hypothetical protein; KEGG: bur:Bcep18194_A5032 hypothetical protein YP_001765040.1 PFAM: CBS domain containing protein; Chloride channel core; KEGG: bur:Bcep18194_A5033 putative voltage-gated ClC-type chloride channel ClcB YP_001765041.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_A5034 transcriptional regulator, TetR family YP_001765042.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bur:Bcep18194_A5035 secretion protein HlyD family YP_001765043.1 PFAM: acriflavin resistance protein; KEGG: bur:Bcep18194_A5036 acriflavin resistance protein YP_001765044.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_A5037 RND efflux system, outer membrane lipoprotein, NodT family YP_001765045.1 PFAM: regulatory protein MerR; Albicidin resistance; Transcription regulator MerR DNA binding; KEGG: bam:Bamb_1663 transcriptional regulator, MerR family YP_001765046.1 KEGG: bam:Bamb_1664 hypothetical protein YP_001765047.1 SMART: helix-turn-helix domain protein; KEGG: bam:Bamb_1665 transcriptional regulator, XRE family YP_001765048.1 KEGG: bam:Bamb_1666 hypothetical protein YP_001765049.1 KEGG: bam:Bamb_1667 hypothetical protein YP_001765050.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; KEGG: bur:Bcep18194_A5042 sigma54 specific transcriptional regulator with PAS sensor, fis family YP_001765051.1 PFAM: beta-lactamase domain protein; KEGG: bam:Bamb_1669 beta-lactamase domain protein YP_001765052.1 PFAM: protein of unknown function DUF442; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_A5044 hypothetical protein YP_001765053.1 PFAM: protein of unknown function DUF81; KEGG: bur:Bcep18194_A5045 protein of unknown function DUF81 YP_001765054.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A5047 ABC spermidine/putrescine transporter, inner membrane subunit YP_001765055.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A5048 ABC spermidine/putrescine transporter, inner membrane subunit YP_001765056.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_A5049 spermidine/putrescine ABC transporter, ATPase subunit YP_001765057.1 PFAM: extracellular solute-binding protein family 1; KEGG: bvi:Bcep1808_1694 extracellular solute-binding protein, family 1 YP_001765058.1 PFAM: protein of unknown function DUF1289; KEGG: bam:Bamb_1676 protein of unknown function DUF1289 YP_001765059.1 PFAM: OmpW family protein; KEGG: bam:Bamb_1680 OmpW family protein YP_001765060.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bur:Bcep18194_A5053 2-nitropropane dioxygenase, NPD YP_001765061.1 PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_1682 betaine-aldehyde dehydrogenase YP_001765062.1 KEGG: bam:Bamb_1683 hypothetical protein YP_001765063.1 KEGG: bur:Bcep18194_A5057 hypothetical protein YP_001765064.1 KEGG: bur:Bcep18194_A5059 hypothetical protein YP_001765065.1 PFAM: polysaccharide deacetylase; KEGG: bam:Bamb_1697 polysaccharide deacetylase YP_001765066.1 PFAM: aminoglycoside phosphotransferase; KEGG: bam:Bamb_1698 aminoglycoside phosphotransferase YP_001765067.1 PFAM: Cephalosporin hydroxylase; KEGG: bur:Bcep18194_A5062 cephalosporin hydroxylase YP_001765068.1 TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; Glycosyltransferase 28 domain; KEGG: bam:Bamb_1700 glycosyltransferase, MGT family YP_001765069.1 PFAM: asparagine synthase; KEGG: bam:Bamb_1701 asparagine synthase YP_001765070.1 KEGG: bam:Bamb_1702 hypothetical protein YP_001765071.1 KEGG: bam:Bamb_1703 aminoglycoside phosphotransferase YP_001765072.1 KEGG: bur:Bcep18194_A5067 hypothetical protein YP_001765073.1 PFAM: transposase IS3/IS911 family protein; KEGG: rme:Rmet_5496 transposase IS3/IS911 YP_001765074.1 PFAM: Integrase catalytic region; KEGG: rme:Rmet_5497 integrase, catalytic region YP_001765075.1 PFAM: transposase mutator type; KEGG: bmu:Bmul_2936 transposase mutator type YP_001765076.1 KEGG: bte:BTH_I0098 hypothetical protein YP_001765077.1 PFAM: transposase IS3/IS911 family protein; KEGG: rso:RSp0461 ISRSO10-transposase orfA protein YP_001765078.1 PFAM: Integrase catalytic region; KEGG: rso:RSc2331 ISRSO10-transposase orfB protein YP_001765079.1 PFAM: transposase mutator type; KEGG: bmu:Bmul_2936 transposase mutator type YP_001765080.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_1709 ABC transporter related YP_001765081.1 KEGG: bam:Bamb_1710 hypothetical protein YP_001765082.1 PFAM: AsmA family protein; KEGG: bur:Bcep18194_A5070 uncharacterized protein involved in outer membrane biogenesis, AsmA YP_001765083.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A5071 ABC transporter, ATPase subunit YP_001765084.1 PFAM: conserved hypothetical protein; KEGG: bur:Bcep18194_A5072 putative ABC transporter, inner membrane subunit YP_001765085.1 KEGG: bur:Bcep18194_A5074 hypothetical protein YP_001765086.1 TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_A5075 zinc-containing alcohol dehydrogenase superfamily YP_001765087.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmu:Bmul_1493 transcriptional regulator, LysR family YP_001765088.1 KEGG: bur:Bcep18194_A5077 phosphoserine phosphatase SerB; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase YP_001765089.1 catalyzes the formation of L-homocysteine from cystathionine YP_001765090.1 KEGG: bur:Bcep18194_A5079 hypothetical protein YP_001765091.1 PFAM: PfkB domain protein; KEGG: bur:Bcep18194_A5081 sugar kinase, ribokinase family YP_001765092.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit YP_001765093.1 KEGG: bur:Bcep18194_A5085 hypothetical protein YP_001765094.1 KEGG: bur:Bcep18194_A5088 hypothetical protein YP_001765095.1 TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: bvi:Bcep1808_1715 polyhydroxyalkonate synthesis repressor, PhaR YP_001765096.1 catalyzes the formation of 3-hydroxybutyryl-CoA from acetoacetyl-CoA in polyhydroxyalkanoate synthesis YP_001765097.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis YP_001765098.1 TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: bur:Bcep18194_A5092 poly(R)-hydroxyalkanoic acid synthase, class I YP_001765099.1 PFAM: protein of unknown function DUF152; KEGG: bur:Bcep18194_A5093 protein of unknown function DUF152 YP_001765100.1 KEGG: bur:Bcep18194_A5094 pseudouridine synthase, RluD; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase YP_001765101.1 KEGG: bur:Bcep18194_A5095 DNA uptake lipoprotein-like YP_001765102.1 SMART: helicase c2; KEGG: bur:Bcep18194_A5096 helicase C2 YP_001765103.1 PFAM: protein of unknown function DUF465; KEGG: bam:Bamb_1734 protein of unknown function DUF465 YP_001765104.1 KEGG: bam:Bamb_1735 hypothetical protein YP_001765105.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: bur:Bcep18194_A5099 RNA binding S1 YP_001765106.1 PFAM: K potassium transporter; KEGG: bur:Bcep18194_A5100 K+ transporter YP_001765107.1 PFAM: phosphoribosyltransferase; KEGG: bam:Bamb_1738 phosphoribosyltransferase YP_001765108.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis YP_001765109.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine YP_001765110.1 KEGG: bur:Bcep18194_A5104 hypothetical protein YP_001765111.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: bur:Bcep18194_A5105 membrane protein, HflC YP_001765112.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: bur:Bcep18194_A5106 membrane protein, HflK YP_001765113.1 TIGRFAM: small GTP-binding protein; GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: bam:Bamb_1744 small GTP-binding protein YP_001765114.1 Stimulates the elongation of poly(A) tails YP_001765115.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_001765116.1 TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone; KEGG: bam:Bamb_1747 pyrrolo-quinoline quinone YP_001765117.1 KEGG: bur:Bcep18194_A5111 hypothetical protein YP_001765118.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG YP_001765119.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis YP_001765120.1 SMART: helix-turn-helix domain protein; KEGG: bur:Bcep18194_A5114 transcriptional regulator, XRE family YP_001765121.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: bam:Bamb_1752 radical SAM enzyme, Cfr family YP_001765122.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate YP_001765123.1 PFAM: protein of unknown function UPF0005; KEGG: bam:Bamb_1754 protein of unknown function UPF0005 YP_001765124.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S] YP_001765125.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bur:Bcep18194_A5119 endonuclease/exonuclease/phosphatase YP_001765126.1 KEGG: bvi:Bcep1808_1746 3'-5' exonuclease YP_001765127.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses YP_001765128.1 PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: bur:Bcep18194_A5122 peptidase M23B YP_001765129.1 KEGG: bur:Bcep18194_A5123 protein-L-isoaspartate(D-aspartate) O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_001765130.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate YP_001765131.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_A5125 L-carnitine dehydratase/bile acid-inducible protein F YP_001765132.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_001765133.1 PFAM: conserved hypothetical protein; KEGG: bur:Bcep18194_A5127 hypothetical protein YP_001765134.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA YP_001765135.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: bmu:Bmul_1445 thioredoxin YP_001765136.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes YP_001765137.1 PFAM: regulatory protein MerR; KEGG: bur:Bcep18194_A5131 transcriptional regulator, MerR family YP_001765138.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5132 major facilitator superfamily (MFS_1) transporter YP_001765139.1 PFAM: protein of unknown function DUF980; KEGG: bur:Bcep18194_A5133 protein of unknown function DUF980 YP_001765140.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome YP_001765141.1 KEGG: bur:Bcep18194_A5135 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like YP_001765142.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bur:Bcep18194_A5136 multi antimicrobial extrusion protein MatE YP_001765143.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_001765144.1 PFAM: alpha/beta hydrolase fold; biotin/lipoyl attachment domain-containing protein; KEGG: bur:Bcep18194_A5138 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_001765145.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: bmu:Bmul_1435 transketolase central region YP_001765146.1 PFAM: dehydrogenase E1 component; KEGG: bur:Bcep18194_A5140 pyruvate dehydrogenase (lipoamide) YP_001765147.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_A5141 short-chain dehydrogenase/reductase SDR YP_001765148.1 PFAM: ATP-NAD/AcoX kinase; KEGG: bur:Bcep18194_A5142 ATP-NAD/AcoX kinase YP_001765149.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_A5143 sigma54 specific transcriptional regulator with GAF sensor, fis family YP_001765150.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bur:Bcep18194_A5144 carboxymuconolactone decarboxylase YP_001765151.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bam:Bamb_1782 transcriptional regulator, MerR family YP_001765152.1 KEGG: bur:Bcep18194_A5146 hypothetical protein YP_001765153.1 PFAM: protein of unknown function DUF937; KEGG: bvi:Bcep1808_1773 protein of unknown function DUF937 YP_001765154.1 KEGG: bam:Bamb_1785 ATPase AAA-2 domain protein; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase YP_001765155.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: bam:Bamb_1786 transcriptional regulator, BadM/Rrf2 family YP_001765156.1 PFAM: globin; KEGG: bam:Bamb_1787 globin YP_001765157.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: bur:Bcep18194_A5151 molybdopterin biosynthesis MoaE YP_001765158.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: bur:Bcep18194_A5152 molybdopterin converting factor, subunit 1 YP_001765159.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: bur:Bcep18194_A5153 molybdopterin binding protein, MoeA YP_001765160.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine YP_001765161.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine YP_001765162.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor YP_001765163.1 PFAM: protein of unknown function DUF498; KEGG: bur:Bcep18194_A5157 protein of unknown function DUF598 YP_001765164.1 PFAM: glycosyl transferase family 39; KEGG: bur:Bcep18194_A5158 glycosyl transferase, family 39 YP_001765165.1 KEGG: bur:Bcep18194_A5159 hypothetical protein YP_001765166.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bur:Bcep18194_A5160 DegT/DnrJ/EryC1/StrS aminotransferase YP_001765167.1 PFAM: glycosyl transferase family 2; KEGG: bur:Bcep18194_A5161 glycosyl transferase, family 2 YP_001765168.1 PFAM: formyl transferase domain protein; KEGG: bam:Bamb_1799 formyl transferase domain protein YP_001765169.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: bur:Bcep18194_A5163 hypothetical protein YP_001765170.1 PFAM: polysaccharide deacetylase; KEGG: bam:Bamb_1801 polysaccharide deacetylase YP_001765171.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bur:Bcep18194_A5165 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_001765172.1 PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: bvi:Bcep1808_1792 PhoH family protein YP_001765173.1 PFAM: NLP/P60 protein; KEGG: bur:Bcep18194_A5167 lipoprotein, NLP/P60 family YP_001765174.1 PFAM: phosphate transporter; KEGG: bur:Bcep18194_A5168 phosphate transporter YP_001765175.1 PFAM: protein of unknown function DUF47; KEGG: bvi:Bcep1808_1795 protein of unknown function DUF47 YP_001765176.1 PFAM: DnaB domain protein helicase domain protein; KEGG: pol:Bpro_3033 DnaB-like helicase-like YP_001765177.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk YP_001765178.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_001765179.1 KEGG: bur:Bcep18194_A5173 primosomal replication protein N-like YP_001765180.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 YP_001765181.1 KEGG: bur:Bcep18194_A5175 putative transmembrane transcriptional regulator (anti-sigma factor) YP_001765182.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_001765183.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmu:Bmul_1397 transcriptional regulator, LysR family YP_001765184.1 catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate YP_001765185.1 KEGG: bam:Bamb_1816 hydroxypyruvate isomerase; TIGRFAM: hydroxypyruvate isomerase; PFAM: Xylose isomerase domain protein TIM barrel YP_001765186.1 KEGG: bam:Bamb_1817 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding YP_001765187.1 PFAM: Peptidoglycan-binding LysM; transport-associated; KEGG: bur:Bcep18194_A5181 hypothetical protein YP_001765188.1 TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase; KEGG: bam:Bamb_1819 L-asparaginases, type II YP_001765189.1 PFAM: PsiF repeat protein; KEGG: bam:Bamb_1820 PsiF repeat protein YP_001765190.1 KEGG: bur:Bcep18194_A5184 hypothetical protein YP_001765191.1 KEGG: bam:Bamb_1822 hypothetical protein YP_001765192.1 PFAM: glycosyl transferase group 1; KEGG: bur:Bcep18194_A5186 glycosyl transferase, group 1 YP_001765193.1 KEGG: bam:Bamb_1824 ATPase-like protein YP_001765194.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bur:Bcep18194_A5188 MscS mechanosensitive ion channel YP_001765195.1 KEGG: bur:Bcep18194_A5189 hypothetical protein YP_001765196.1 KEGG: bur:Bcep18194_A5190 ankyrin repeat protein YP_001765197.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: bam:Bamb_1828 hydrolase, TatD family YP_001765198.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA YP_001765199.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP) YP_001765200.1 PFAM: aminodeoxychorismate lyase; KEGG: bur:Bcep18194_A5194 aminodeoxychorismate lyase YP_001765201.1 TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: bur:Bcep18194_A5195 glycine cleavage T protein (aminomethyl transferase) YP_001765202.1 PFAM: protein of unknown function DUF833; KEGG: bur:Bcep18194_A5196 protein of unknown function DUF833 YP_001765203.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A5197 GCN5-related N-acetyltransferase YP_001765204.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bur:Bcep18194_A5198 esterase/lipase/thioesterase YP_001765205.1 PFAM: thioesterase superfamily protein; KEGG: bur:Bcep18194_A5199 phenylacetic acid degradation-related protein YP_001765206.1 PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: bur:Bcep18194_A5200 hypothetical protein YP_001765207.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bam:Bamb_1021 diguanylate cyclase YP_001765208.1 KEGG: bam:Bamb_1890 putative lipoprotein YP_001765209.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bur:Bcep18194_A5204 diguanylate cyclase (GGDEF domain) YP_001765210.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001765211.1 PFAM: isochorismatase hydrolase; KEGG: bur:Bcep18194_A5206 nicotinamidase YP_001765212.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bur:Bcep18194_A5207 3-hydroxyacyl-CoA dehydrogenase YP_001765213.1 activates fatty acids by binding to coenzyme A YP_001765214.1 PFAM: protein of unknown function UPF0061; KEGG: bam:Bamb_1896 protein of unknown function UPF0061 YP_001765215.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: bur:Bcep18194_A5210 protein-methionine-S-oxide reductase YP_001765216.1 Involved in cell division; probably involved in intracellular septation YP_001765217.1 PFAM: BolA family protein; KEGG: bam:Bamb_1899 BolA family protein YP_001765218.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bur:Bcep18194_A5213 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001765219.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A5214 GCN5-related N-acetyltransferase YP_001765220.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_001765221.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A5216 D-amino-acid dehydrogenase YP_001765222.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: bur:Bcep18194_A5217 hypothetical protein YP_001765223.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family YP_001765224.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A5219 ABC transporter, ATPase subunit YP_001765225.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bur:Bcep18194_A5220 lipolytic enzyme, G-D-S-L YP_001765226.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bur:Bcep18194_A5221 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001765227.1 KEGG: bvi:Bcep1808_1853 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001765228.1 binds and unfolds substrates as part of the ClpXP protease YP_001765229.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates YP_001765230.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer YP_001765231.1 PFAM: glycerate kinase; KEGG: bur:Bcep18194_A5226 glycerate kinase YP_001765232.1 PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_A5227 transcriptional regulator, MarR family YP_001765233.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis YP_001765234.1 PFAM: regulatory protein LuxR; Bacterio-opsin activator HTH domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bur:Bcep18194_A5229 transcriptional regulator, LuxR family YP_001765235.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_A5230 outer membrane protein, (porin) YP_001765236.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5231 major facilitator superfamily (MFS_1) transporter YP_001765237.1 PFAM: histone deacetylase superfamily; KEGG: bur:Bcep18194_A5232 histone deacetylase superfamily YP_001765238.1 KEGG: bur:Bcep18194_A5233 hypothetical protein YP_001765239.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: bxe:Bxe_A2660 putative reverse transcriptase-maturase-endonucleas YP_001765240.1 KEGG: bur:Bcep18194_A5234 hypothetical protein YP_001765241.1 TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: bam:Bamb_1922 squalene/phytoene synthase YP_001765242.1 PFAM: protein of unknown function DUF1501; KEGG: bur:Bcep18194_A5246 hypothetical protein YP_001765243.1 PFAM: Protein of unknown function DUF1800; KEGG: bur:Bcep18194_A5247 hypothetical protein YP_001765244.1 KEGG: bur:Bcep18194_A5248 hypothetical protein YP_001765245.1 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation YP_001765246.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_A5250 periplasmic sensor signal transduction histidine kinase YP_001765247.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bam:Bamb_1928 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_001765248.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bur:Bcep18194_A5252 carboxymuconolactone decarboxylase YP_001765249.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate YP_001765250.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers YP_001765251.1 KEGG: bur:Bcep18194_A5255 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases YP_001765252.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine YP_001765253.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bam:Bamb_1934 pyridoxal-5'-phosphate-dependent enzyme, beta subunit YP_001765254.1 KEGG: bur:Bcep18194_A5258 hypothetical protein YP_001765255.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bur:Bcep18194_A5259 penicillin-binding protein 1A YP_001765256.1 PFAM: PspA/IM30 family protein; KEGG: bur:Bcep18194_A5260 phage shock protein A, PspA YP_001765257.1 KEGG: bur:Bcep18194_A5261 TPR repeat protein YP_001765258.1 homopentamer; channel that opens in response to pressure or hypoosmotic shock YP_001765259.1 KEGG: bur:Bcep18194_A5263 hypothetical protein YP_001765260.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bur:Bcep18194_A5264 2-hydroxy-3-oxopropionate reductase YP_001765261.1 PFAM: protein of unknown function DUF1458; KEGG: bur:Bcep18194_A5265 protein of unknown function DUF1458 YP_001765262.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_1942 transcriptional regulator, LysR family YP_001765263.1 catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway. YP_001765264.1 TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: bur:Bcep18194_A5268 transthyretin YP_001765265.1 PFAM: protein of unknown function DUF989; KEGG: bam:Bamb_1946 protein of unknown function DUF989 YP_001765266.1 KEGG: bam:Bamb_1947 hypothetical protein YP_001765267.1 catalyzes the formation of glyoxylate from (S)-ureidoglycolate YP_001765268.1 catalyzes the formation of S-ureidoglycolate and urea from allantoate YP_001765269.1 KEGG: bam:Bamb_1950 hypothetical protein YP_001765270.1 KEGG: bur:Bcep18194_A5278 polysaccharide deacetylase; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase YP_001765271.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: bur:Bcep18194_A5279 Asp/Glu racemase YP_001765272.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bur:Bcep18194_A5280 permease for cytosine/purines, uracil, thiamine, allantoin transporter YP_001765273.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bam:Bamb_1954 transcriptional regulator, GntR family YP_001765274.1 catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine YP_001765275.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bur:Bcep18194_A5283 cytidine/deoxycytidylate deaminase, zinc-binding region YP_001765276.1 KEGG: bur:Bcep18194_A5284 hypothetical protein YP_001765277.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5285 major facilitator superfamily (MFS_1) transporter YP_001765278.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bur:Bcep18194_A5286 transcriptional regulator, GntR family YP_001765279.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bam:Bamb_1960 fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_001765280.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bur:Bcep18194_A5288 4Fe-4S ferredoxin, iron-sulfur binding YP_001765281.1 KEGG: bmu:Bmul_1296 nitrate ABC transporter, periplasmic nitrate-binding protein, putative YP_001765282.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmu:Bmul_1295 binding-protein-dependent transport systems inner membrane component YP_001765283.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmu:Bmul_1294 ABC transporter related YP_001765284.1 PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: bam:Bamb_1962 PBS lyase heat domain protein repeat-containing protein YP_001765285.1 KEGG: bur:Bcep18194_A5290 hypothetical protein YP_001765286.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bur:Bcep18194_A5291 6-phosphogluconate dehydrogenase, NAD-binding YP_001765287.1 PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A5292 NUDIX hydrolase YP_001765288.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A5293 hypothetical protein YP_001765289.1 TIGRFAM: 2'-5' RNA ligase; KEGG: bmu:Bmul_1290 2'-5' RNA ligase YP_001765290.1 KEGG: bur:Bcep18194_A5296 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_001765291.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: bxe:Bxe_A2660 putative reverse transcriptase-maturase-endonucleas YP_001765292.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway YP_001765293.1 KEGG: bam:Bamb_2023 hypothetical protein YP_001765294.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate YP_001765295.1 KEGG: bur:Bcep18194_A5302 metal-binding integral membrane protein-like YP_001765296.1 PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: bur:Bcep18194_A5303 protein of unknown function DUF899, thioredoxin-like YP_001765297.1 KEGG: bur:Bcep18194_A5304 hypothetical protein YP_001765298.1 KEGG: bam:Bamb_2028 hypothetical protein YP_001765299.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_A5306 hypothetical protein YP_001765300.1 PFAM: protein of unknown function UPF0125; KEGG: bur:Bcep18194_A5307 hypothetical protein YP_001765301.1 PFAM: cyclase/dehydrase; KEGG: bam:Bamb_2031 cyclase/dehydrase YP_001765302.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation YP_001765303.1 PFAM: band 7 protein; KEGG: bur:Bcep18194_A5310 band 7 protein YP_001765304.1 PFAM: protein of unknown function DUF107; KEGG: bur:Bcep18194_A5311 protein of unknown function DUF107 YP_001765305.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_001765306.1 PFAM: protein of unknown function DUF299; KEGG: bur:Bcep18194_A5313 hypothetical protein YP_001765307.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bur:Bcep18194_A5314 tRNA/rRNA methyltransferase (SpoU) YP_001765308.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids YP_001765309.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM YP_001765310.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis YP_001765311.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP YP_001765312.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis YP_001765313.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: bmu:Bmul_1266 outer membrane chaperone Skp (OmpH) YP_001765314.1 TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: bur:Bcep18194_A5321 surface antigen (D15) YP_001765315.1 KEGG: bur:Bcep18194_A5322 peptidase M50, putative membrane-associated zinc metallopeptidase; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein YP_001765316.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate YP_001765317.1 PFAM: phosphatidate cytidylyltransferase; KEGG: bur:Bcep18194_A5324 phosphatidate cytidylyltransferase YP_001765318.1 KEGG: bur:Bcep18194_A5325 di-trans-poly-cis-decaprenylcistransferase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_001765319.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs YP_001765320.1 Catalyzes the phosphorylation of UMP to UDP YP_001765321.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu YP_001765322.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit YP_001765323.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn YP_001765324.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein YP_001765325.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: bur:Bcep18194_A5332 pseudouridine synthase, Rsu YP_001765326.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) YP_001765327.1 KEGG: bur:Bcep18194_A5334 DNA ligase (NAD+); TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase YP_001765328.1 SMART: ZipA FtsZ-binding region; KEGG: bur:Bcep18194_A5335 hypothetical protein YP_001765329.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: bur:Bcep18194_A5336 chromosome segregation protein SMC YP_001765330.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_A5337 protein of unknown function DUF6, transmembrane YP_001765331.1 catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate YP_001765332.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway YP_001765333.1 PFAM: arsenate reductase and related; KEGG: bam:Bamb_2063 hypothetical protein YP_001765334.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica. YP_001765335.1 involved in methylation of ribosomal protein L3 YP_001765336.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol) YP_001765337.1 PFAM: glutathione peroxidase; Redoxin domain protein; KEGG: bur:Bcep18194_A5344 glutathione peroxidase YP_001765338.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_2068 ABC transporter related YP_001765339.1 KEGG: bur:Bcep18194_A5346 hypothetical protein YP_001765340.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_001765341.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer YP_001765342.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_2072 major facilitator superfamily MFS_1 YP_001765343.1 KEGG: bur:Bcep18194_A5350 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1 YP_001765344.1 PFAM: Domain of unknown function DUF1853; KEGG: bur:Bcep18194_A5351 hypothetical protein YP_001765345.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: bur:Bcep18194_A5352 phage SPO1 DNA polymerase-related protein YP_001765346.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A5353 ribosomal-protein-alanine acetyltransferase YP_001765347.1 PFAM: peptidase M22 glycoprotease; KEGG: bur:Bcep18194_A5354 peptidase M22, glycoprotease YP_001765348.1 PFAM: acyl-coA-binding protein ACBP; KEGG: bur:Bcep18194_A5355 acyl-CoA-binding protein, ACBP YP_001765349.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bur:Bcep18194_A5356 DEAD/DEAH box helicase YP_001765350.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: bmu:Bmul_1229 isocitrate lyase YP_001765351.1 PFAM: UspA domain protein; KEGG: bvi:Bcep1808_1955 UspA domain protein YP_001765352.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_2082 transcriptional regulator, LysR family YP_001765353.1 KEGG: bur:Bcep18194_A5360 haloacid dehalogenase, type II; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase YP_001765354.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle YP_001765355.1 PFAM: AIG2 family protein; KEGG: bur:Bcep18194_A5362 hypothetical protein YP_001765356.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: bur:Bcep18194_A5363 transcriptional regulator, AraC family YP_001765357.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bmu:Bmul_1221 GCN5-related N-acetyltransferase YP_001765358.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_001765359.1 PFAM: Patatin; KEGG: bur:Bcep18194_A5366 patatin YP_001765360.1 PFAM: NLP/P60 protein; KEGG: bur:Bcep18194_A5367 NLP/P60 family protein YP_001765361.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_A5368 ABC transporter, ATPase subunit YP_001765362.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A5369 ABC transporter, inner membrane subunit YP_001765363.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A5370 ABC transporter, inner membrane subunit YP_001765364.1 PFAM: extracellular solute-binding protein family 5; KEGG: bur:Bcep18194_A5371 ABC transporter, periplasmic ligand binding protein YP_001765365.1 KEGG: bvi:Bcep1808_1969 hypothetical protein YP_001765366.1 PFAM: transcriptional regulator domain protein; KEGG: bam:Bamb_2100 two component transcriptional regulator, winged helix family YP_001765367.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bam:Bamb_2101 periplasmic sensor signal transduction histidine kinase YP_001765368.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bam:Bamb_2102 two component transcriptional regulator, winged helix family YP_001765369.1 KEGG: bam:Bamb_2103 hypothetical protein YP_001765370.1 TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: bur:Bcep18194_A5373 cytochrome c oxidase subunit IV YP_001765371.1 TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: bam:Bamb_2105 cytochrome c oxidase, subunit III YP_001765372.1 KEGG: bur:Bcep18194_A5375 cytochrome-c oxidase; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_001765373.1 TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: bur:Bcep18194_A5376 cytochrome o ubiquinol oxidase subunit II YP_001765374.1 KEGG: bur:Bcep18194_A5377 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_001765375.1 KEGG: bvi:Bcep1808_1975 hypothetical protein YP_001765376.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation. YP_001765377.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; KEGG: bur:Bcep18194_A5381 tRNA(Ile)-lysidine synthetase YP_001765378.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein YP_001765379.1 PFAM: HhH-GPD family protein; KEGG: bur:Bcep18194_A5383 3-methyladenine DNA glycosylase/8-oxoguanineDNA glycosylase YP_001765380.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_001765381.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_A5385 TPR repeat protein YP_001765382.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bam:Bamb_2115 peptidylprolyl isomerase YP_001765383.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bam:Bamb_2116 peptidyl-prolyl cis-trans isomerase, cyclophilin type YP_001765384.1 catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine YP_001765385.1 TIGRFAM: serine O-acetyltransferase; KEGG: bmu:Bmul_1198 serine O-acetyltransferase YP_001765386.1 TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bur:Bcep18194_A5390 RNA methyltransferase TrmH, group 1 YP_001765387.1 PFAM: inositol monophosphatase; KEGG: bam:Bamb_2120 inositol monophosphatase YP_001765388.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_A5392 FAD dependent oxidoreductase YP_001765389.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: bur:Bcep18194_C7247 ethyl tert-butyl ether degradation protein, EthD YP_001765390.1 This protein performs the mismatch recognition step during the DNA repair process YP_001765391.1 KEGG: bur:Bcep18194_A5395 hypothetical protein YP_001765392.1 KEGG: bur:Bcep18194_A5396 FKBP-type peptidyl-prolyl cis-trans isomerase 2-like YP_001765393.1 PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: bur:Bcep18194_A5397 cupin domain protein YP_001765394.1 PFAM: beta-lactamase domain protein; KEGG: bur:Bcep18194_A5399 beta-lactamase-like YP_001765395.1 KEGG: bur:Bcep18194_A5400 uncharacterized lipoprotein YP_001765396.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis YP_001765397.1 KEGG: bur:Bcep18194_A5402 hypothetical protein YP_001765398.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001765399.1 PFAM: peptidase M50; KEGG: bur:Bcep18194_A5404 peptidase M50 YP_001765400.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: bur:Bcep18194_A5405 SUA5/YciO/YrdC/YwlC YP_001765401.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: bur:Bcep18194_A5406 PHP-like metal-dependent phosphoesterase YP_001765402.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_A5407 alpha/beta hydrolase YP_001765403.1 PFAM: protein of unknown function DUF455; KEGG: bam:Bamb_2139 protein of unknown function DUF455 YP_001765404.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: bmu:Bmul_1171 transferase hexapeptide repeat containing protein YP_001765405.1 PFAM: Hsp33 protein; KEGG: bur:Bcep18194_A5410 HSP33 protein YP_001765406.1 KEGG: bur:Bcep18194_A5411 hypothetical protein YP_001765407.1 forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein YP_001765408.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis YP_001765409.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis YP_001765410.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_001765411.1 KEGG: bur:Bcep18194_A5416 hypothetical protein YP_001765412.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: bur:Bcep18194_A5417 DNA internalization-related competence protein ComEC/Rec2 YP_001765413.1 PFAM: TatD-related deoxyribonuclease; KEGG: bur:Bcep18194_A5418 TatD-related deoxyribonuclease YP_001765414.1 KEGG: bur:Bcep18194_A5419 lipoprotein releasing system, ATP-binding protein; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_001765415.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: bur:Bcep18194_A5420 lipoprotein releasing system, transmembrane protein, LolC/E family YP_001765416.1 KEGG: bur:Bcep18194_A5421 hypothetical protein YP_001765417.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: bur:Bcep18194_A5422 RecJ exonuclease YP_001765418.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: bur:Bcep18194_A5423 peptide chain release factor 2 YP_001765419.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 YP_001765420.1 PFAM: 17 kDa surface antigen; KEGG: bur:Bcep18194_A5425 outer membrane lipoprotein YP_001765421.1 TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: bur:Bcep18194_A5427 ferredoxin, 2Fe-2S type YP_001765422.1 involved in the maturation of iron-sulfur cluster-containing proteins YP_001765423.1 J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins YP_001765424.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly protein IscA; PFAM: HesB/YadR/YfhF-family protein; KEGG: bam:Bamb_2161 iron-sulfur cluster assembly protein IscA YP_001765425.1 TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: bvi:Bcep1808_2204 scaffold protein YP_001765426.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis YP_001765427.1 TIGRFAM: transcriptional regulator, Rrf2 family; iron-sulfur cluster assembly transcription factor IscR; PFAM: protein of unknown function UPF0074; KEGG: bmu:Bmul_1143 transcriptional regulator, BadM/Rrf2 family YP_001765428.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bur:Bcep18194_A5434 protein tyrosine phosphatase YP_001765429.1 KEGG: bur:Bcep18194_A5435 hypothetical protein YP_001765430.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF162; KEGG: bur:Bcep18194_A5436 4Fe-4S ferredoxin, iron-sulfur binding YP_001765431.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bur:Bcep18194_A5437 protein of unknown function DUF224, cysteine-rich region YP_001765432.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bur:Bcep18194_A5438 transcriptional regulator, IclR family YP_001765433.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: bur:Bcep18194_A5439 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 YP_001765434.1 TIGRFAM: phasin family protein; PFAM: Phasin family protein; KEGG: bur:Bcep18194_A5440 phasin YP_001765436.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: bur:Bcep18194_A5441 dihydrolipoamide dehydrogenase YP_001765437.1 KEGG: bam:Bamb_2173 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein YP_001765438.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC YP_001765439.1 KEGG: bam:Bamb_2175 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001765440.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bam:Bamb_2176 two component transcriptional regulator, LuxR family YP_001765441.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate YP_001765442.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: bur:Bcep18194_A5447 oligopeptidase A YP_001765443.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function YP_001765444.1 TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: bur:Bcep18194_A5449 aspartate racemase YP_001765445.1 KEGG: bam:Bamb_2181 hypothetical protein YP_001765446.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bur:Bcep18194_A5454 exodeoxyribonuclease III xth YP_001765447.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: bur:Bcep18194_A5455 peptidase S9, prolyl oligopeptidase active site region YP_001765448.1 KEGG: bur:Bcep18194_A5456 nitrogen metabolism transcriptional regulator, NtrC, fis family; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001765449.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_A5457 signal transduction histidine kinase, nitrogen specific, NtrB YP_001765450.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: bam:Bamb_2186 glutamine synthetase, type I YP_001765451.1 SMART: Rhodanese domain protein; KEGG: bur:Bcep18194_A5459 rhodanese-like protein YP_001765452.1 PFAM: molybdopterin binding domain; KEGG: bur:Bcep18194_A5460 molybdopterin binding protein YP_001765453.1 KEGG: bur:Bcep18194_A5461 hypothetical protein YP_001765454.1 PFAM: fatty acid hydroxylase; KEGG: bur:Bcep18194_A5462 sterol desaturase-like YP_001765455.1 KEGG: bur:Bcep18194_A5463 hypothetical protein YP_001765456.1 KEGG: bur:Bcep18194_A5464 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases YP_001765457.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis YP_001765458.1 PFAM: Fe(II) trafficking protein YggX; KEGG: bur:Bcep18194_A5466 hypothetical protein YP_001765459.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_2195 major facilitator superfamily MFS_1 YP_001765460.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_A5468 L-carnitine dehydratase/bile acid-inducible protein F YP_001765461.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_A5469 acyl-CoA dehydrogenase YP_001765462.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_2198 transcriptional regulator, LysR family YP_001765463.1 PFAM: aminotransferase class-III; KEGG: bam:Bamb_2200 aminotransferase class-III YP_001765464.1 PFAM: glutamine synthetase catalytic region; KEGG: bam:Bamb_2201 glutamate--ammonia ligase YP_001765465.1 PFAM: peptidase C26; KEGG: bur:Bcep18194_A5474 peptidase C26 YP_001765466.1 PFAM: N-formylglutamate amidohydrolase; KEGG: bur:Bcep18194_A5476 N-formylglutamate deformylase YP_001765467.1 catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate YP_001765468.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway YP_001765469.1 PFAM: protein of unknown function DUF886; KEGG: bur:Bcep18194_A5479 protein of unknown function DUF886 YP_001765470.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism YP_001765471.1 TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bur:Bcep18194_A5481 transcriptional regulator, histidine utilization repressor, GntR family YP_001765472.1 catalyzes the degradation of histidine to urocanate and ammmonia YP_001765473.1 PFAM: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_A5483 ABC amino acid transporter, periplasmic ligand binding protein YP_001765474.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: bur:Bcep18194_A5484 4'-phosphopantetheinyl transferase YP_001765475.1 KEGG: bur:Bcep18194_A5485 alpha/beta hydrolase YP_001765476.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A5486 transcriptional regulator, LysR family YP_001765477.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5487 major facilitator superfamily (MFS_1) transporter YP_001765479.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: bur:Bcep18194_A5488 deoxyribodipyrimidine photolyase YP_001765480.1 KEGG: bur:Bcep18194_A5491 phosphoesterase, DHHA1 YP_001765481.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5498 major facilitator superfamily (MFS_1) transporter YP_001765482.1 KEGG: bur:Bcep18194_A5499 3-carboxymuconate cyclase-like YP_001765483.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_A5500 transcriptional regulator, AraC family YP_001765484.1 KEGG: bur:Bcep18194_A5501 hypothetical protein YP_001765485.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bur:Bcep18194_A5502 HAD-superfamily hydrolase subfamily IB, PSPase-like YP_001765486.1 KEGG: xom:XOO_2659 hypothetical protein YP_001765487.1 KEGG: bvi:Bcep1808_1196 hypothetical protein YP_001765488.1 KEGG: bte:BTH_I2692 unnamed protein product; unknown protein, putative YP_001765489.1 TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: bte:BTH_I2693 rhs element Vgr protein, putative YP_001765490.1 KEGG: bvi:Bcep1808_3912 hypothetical protein YP_001765492.1 TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: bte:BTH_I2697 rhs element Vgr protein, putative YP_001765493.1 KEGG: bur:Bcep18194_C7613 hypothetical protein YP_001765494.1 KEGG: bur:Bcep18194_C7614 hypothetical protein YP_001765495.1 TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: bur:Bcep18194_C7615 rhs element Vgr protein YP_001765496.1 KEGG: bte:BTH_I2707 hypothetical protein YP_001765497.1 PFAM: Na+/solute symporter; KEGG: bur:Bcep18194_A5518 Na+/solute symporter YP_001765498.1 KEGG: bur:Bcep18194_A5519 membrane protein-like YP_001765499.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA YP_001765500.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_A5521 protein of unknown function DUF6, transmembrane YP_001765501.1 PFAM: conserved hypothetical protein; KEGG: bvi:Bcep1808_2279 hypothetical protein YP_001765502.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: bam:Bamb_2233 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit YP_001765503.1 TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: bam:Bamb_2234 bacterioferritin YP_001765504.1 converts L-glutamate to D-glutamate, a component of peptidoglycan YP_001765505.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bvi:Bcep1808_2283 BFD domain protein (2Fe-2S)-binding domain protein YP_001765506.1 TIGRFAM: TonB family protein; KEGG: bam:Bamb_2237 TonB family protein YP_001765507.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bur:Bcep18194_A5528 MotA/TolQ/ExbB proton channel YP_001765508.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bur:Bcep18194_A5529 biopolymer transport protein ExbD/TolR YP_001765509.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A5530 transcriptional regulator, LysR family YP_001765510.1 PFAM: Pirin domain protein; KEGG: bur:Bcep18194_A5531 pirin-like protein YP_001765511.1 PFAM: Domain of unknown function DUF1857; KEGG: bur:Bcep18194_A5532 hypothetical protein YP_001765512.1 KEGG: bmu:Bmul_1072 hypothetical protein YP_001765513.1 KEGG: bur:Bcep18194_A5534 polyferredoxin-like YP_001765514.1 PFAM: iron permease FTR1; KEGG: bur:Bcep18194_A5535 iron permease FTR1 YP_001765515.1 KEGG: bam:Bamb_2246 hypothetical protein YP_001765516.1 KEGG: bam:Bamb_2247 uncharacterized protein probably involved in high-affinity Fe2+ transport YP_001765517.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion YP_001765518.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate YP_001765519.1 catalyzes the formation of acetoacetate from 3-hydroxybutyrate YP_001765520.1 PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_A5541 aldo/keto reductase YP_001765521.1 PFAM: protein of unknown function DUF519; KEGG: bur:Bcep18194_A5542 protein of unknown function DUF519 YP_001765522.1 KEGG: bur:Bcep18194_A5543 hypothetical protein YP_001765523.1 KEGG: bam:Bamb_2254 hypothetical protein YP_001765524.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bur:Bcep18194_A5545 transcriptional regulator, MerR family YP_001765525.1 KEGG: bur:Bcep18194_A5546 hypothetical protein YP_001765526.1 PFAM: regulatory protein LuxR; KEGG: bur:Bcep18194_A5547 two component transcriptional regulator, LuxR family YP_001765527.1 KEGG: bur:Bcep18194_A5548 membrane protein-like YP_001765528.1 KEGG: bur:Bcep18194_A5549 hypothetical protein YP_001765529.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: bur:Bcep18194_A5550 peptidase M14, carboxypeptidase A YP_001765530.1 PFAM: protein of unknown function DUF328; KEGG: bur:Bcep18194_A5551 hypothetical protein YP_001765531.1 SMART: Nucleotide binding protein PINc; KEGG: bur:Bcep18194_A5552 protein of unknown function DUF132 YP_001765532.1 catalyzes the transfer of an amino moiety YP_001765533.1 KEGG: bur:Bcep18194_A5554 glutathione S-transferase-like YP_001765534.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001765535.1 PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_A5556 glutathione S-transferase-like YP_001765536.1 PFAM: MaoC domain protein dehydratase; KEGG: bur:Bcep18194_A5557 MaoC-like dehydratase YP_001765537.1 PFAM: MaoC domain protein dehydratase; KEGG: bur:Bcep18194_A5558 MaoC-like dehydratase YP_001765538.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_A5559 acyl-CoA dehydrogenase YP_001765539.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bur:Bcep18194_A5560 acyl-CoA dehydrogenase YP_001765540.1 PFAM: protein of unknown function DUF1178; KEGG: bam:Bamb_2271 protein of unknown function DUF1178 YP_001765541.1 PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A5562 NUDIX hydrolase YP_001765542.1 KEGG: bam:Bamb_2273 hypothetical protein YP_001765543.1 Catalyzes the transfer of electrons from NADH to quinone YP_001765544.1 Catalyzes the transfer of electrons from NADH to quinone YP_001765545.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_001765546.1 Catalyzes the transfer of electrons from NADH to quinone YP_001765547.1 Catalyzes the transfer of electrons from NADH to quinone YP_001765548.1 Catalyzes the transfer of electrons from NADH to quinone YP_001765549.1 Catalyzes the transfer of electrons from NADH to quinone YP_001765550.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_001765551.1 KEGG: bur:Bcep18194_A5572 NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit YP_001765552.1 Catalyzes the transfer of electrons from NADH to quinone YP_001765553.1 Catalyzes the transfer of electrons from NADH to quinone YP_001765554.1 Catalyzes the transfer of electrons from NADH to quinone YP_001765555.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen YP_001765556.1 Catalyzes the transfer of electrons from NADH to quinone YP_001765557.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: bur:Bcep18194_A5578 preprotein translocase subunit SecG YP_001765558.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate YP_001765559.1 TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_A5580 zinc-containing alcohol dehydrogenase superfamily YP_001765560.1 KEGG: bur:Bcep18194_A5581 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein YP_001765561.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence YP_001765562.1 KEGG: bur:Bcep18194_A5583 ABC branched chain amino acid family transporter, periplasmic ligand binding protein YP_001765563.1 KEGG: bam:Bamb_2294 hypothetical protein YP_001765564.1 PFAM: carbonic anhydrase; KEGG: bam:Bamb_2296 carbonate dehydratase YP_001765565.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bur:Bcep18194_A5586 sulphate transporter YP_001765566.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis YP_001765567.1 TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bur:Bcep18194_A5588 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_001765568.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine YP_001765569.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis YP_001765570.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit YP_001765571.1 acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate YP_001765572.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates YP_001765573.1 KEGG: bur:Bcep18194_A5594 hypothetical protein YP_001765574.1 KEGG: bur:Bcep18194_A5595 hypothetical protein YP_001765575.1 PFAM: RDD domain containing protein; KEGG: bur:Bcep18194_A5596 RDD family protein YP_001765576.1 PFAM: metallophosphoesterase; KEGG: bur:Bcep18194_A5597 metallophosphoesterase YP_001765577.1 PFAM: glycosyl transferase group 1; KEGG: bur:Bcep18194_A5598 glycosyl transferase, group 1 YP_001765578.1 PFAM: diacylglycerol kinase; KEGG: bur:Bcep18194_A5599 diacylglycerol kinase YP_001765579.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_A5600 transcriptional regulator, TetR family YP_001765580.1 PFAM: conserved hypothetical protein; KEGG: bur:Bcep18194_A5601 hypothetical protein YP_001765581.1 Converts glucose to D-glucono-1,5 lactone YP_001765582.1 KEGG: bur:Bcep18194_A5603 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family YP_001765583.1 PFAM: protein of unknown function DUF924; KEGG: bur:Bcep18194_A5604 protein of unknown function DUF924 YP_001765584.1 PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: bur:Bcep18194_A5605 alanyl-transfer RNA synthetase YP_001765585.1 PFAM: globin; KEGG: bmu:Bmul_0999 globin YP_001765586.1 PFAM: protein of unknown function DUF214; KEGG: bur:Bcep18194_A5607 protein of unknown function DUF214 YP_001765587.1 KEGG: bur:Bcep18194_A5608 hypothetical protein YP_001765588.1 PFAM: small multidrug resistance protein; KEGG: bur:Bcep18194_A5609 small multidrug resistance protein YP_001765589.1 PFAM: protein of unknown function DUF333; KEGG: bur:Bcep18194_A5610 protein of unknown function DUF333 YP_001765590.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_A5611 two component transcriptional regulator, winged helix family YP_001765591.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: bur:Bcep18194_A5612 osmosensitive K+ channel signal transduction histidine kinase YP_001765592.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex YP_001765593.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions YP_001765594.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions YP_001765595.1 KEGG: bam:Bamb_2327 hypothetical protein YP_001765596.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bam:Bamb_2328 alcohol dehydrogenase, zinc-binding domain protein YP_001765597.1 catalyzes the formation of methylglyoxal from glycerone phosphate YP_001765598.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_A5619 short-chain dehydrogenase/reductase SDR YP_001765599.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate YP_001765600.1 PFAM: protein of unknown function DUF28; KEGG: bur:Bcep18194_A5621 hypothetical protein YP_001765601.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis YP_001765602.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis YP_001765603.1 catalyzes the formation of deamido-NAD(+) from nicotinate ribonucleotide and ATP YP_001765604.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: bur:Bcep18194_A5625 iojap-related protein YP_001765605.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA YP_001765606.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell YP_001765607.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: bur:Bcep18194_A5628 ribonuclease E and G YP_001765608.1 PFAM: protein of unknown function DUF469; KEGG: bur:Bcep18194_A5643 protein of unknown function DUF469 YP_001765609.1 KEGG: bur:Bcep18194_A5645 hypothetical protein YP_001765610.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5646 major facilitator superfamily (MFS_1) transporter YP_001765611.1 KEGG: bur:Bcep18194_A5647 membrane protein-like YP_001765612.1 KEGG: bvi:Bcep1808_2395 integral membrane protein-like protein YP_001765613.1 KEGG: bur:Bcep18194_A5649 lipid A export ATP-binding/permease protein MsbA; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase YP_001765614.1 PFAM: glycosyl transferase family 2; KEGG: bvi:Bcep1808_2397 glycosyl transferase, family 2 YP_001765615.1 PFAM: glycosyl transferase family 2; KEGG: bam:Bamb_2348 glycosyl transferase, family 2 YP_001765616.1 PFAM: O-antigen polymerase; KEGG: bur:Bcep18194_A5652 O-antigen polymerase YP_001765617.1 PFAM: glycosyl transferase family 9; KEGG: bur:Bcep18194_A5653 glycosyl transferase, family 9 YP_001765618.1 PFAM: glycosyl transferase family 9; KEGG: bur:Bcep18194_A5654 glycosyl transferase, family 9 YP_001765619.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase YP_001765620.1 PFAM: Rhodanese domain protein; KEGG: bam:Bamb_2353 rhodanese domain protein YP_001765621.1 this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu YP_001765622.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bur:Bcep18194_A5658 DEAD/DEAH box helicase-like YP_001765623.1 KEGG: bur:Bcep18194_A5659 periplasmic protein YP_001765624.1 KEGG: bam:Bamb_2357 hypothetical protein YP_001765625.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis YP_001765626.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: bur:Bcep18194_A5662 protein of unknown function DUF306, MetA and HslJ YP_001765627.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: bur:Bcep18194_A5663 cell division FtsK/SpoIIIE YP_001765628.1 KEGG: bur:Bcep18194_A5664 3-carboxymuconate cyclase-like YP_001765629.1 PFAM: glycoside hydrolase 15-related; KEGG: bur:Bcep18194_A5665 glycoside hydrolase 15-related YP_001765630.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: bam:Bamb_2363 polyhydroxyalkanoate depolymerase, intracellular YP_001765631.1 PFAM: regulatory protein TetR; KEGG: bam:Bamb_2364 transcriptional regulator, TetR family YP_001765632.1 Involved in the electron transport chain YP_001765633.1 KEGG: bur:Bcep18194_A5669 endonuclease III/Nth; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein YP_001765634.1 PFAM: protein of unknown function DUF6 transmembrane; Protein of unknown function DUF250; KEGG: bur:Bcep18194_A5670 protein of unknown function DUF6, transmembrane YP_001765635.1 PFAM: Domain of unknown function DUF1841; KEGG: bmu:Bmul_0948 domain of unknown function DUF1841 YP_001765636.1 PFAM: cytochrome c class I; KEGG: bvi:Bcep1808_2420 cytochrome c, class I YP_001765637.1 PFAM: cytochrome c class I; KEGG: bvi:Bcep1808_2421 cytochrome c, class I YP_001765638.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bur:Bcep18194_A5674 AAA ATPase YP_001765639.1 PFAM: VWA containing CoxE family protein; KEGG: bur:Bcep18194_A5675 hypothetical protein YP_001765640.1 TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: bvi:Bcep1808_2424 benzoate transporter YP_001765641.1 KEGG: bur:Bcep18194_A5677 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase YP_001765642.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: bam:Bamb_2375 3-demethylubiquinone-9 3-methyltransferase YP_001765643.1 PFAM: Na+/solute symporter; KEGG: bur:Bcep18194_A5680 Na+/solute symporter YP_001765644.1 KEGG: bam:Bamb_2377 hypothetical protein YP_001765645.1 KEGG: bur:Bcep18194_A5682 spermidine synthase-like YP_001765646.1 KEGG: bam:Bamb_2379 hypothetical protein YP_001765647.1 KEGG: mpt:Mpe_A0426 putative mobilization protein MobD YP_001765648.1 KEGG: bam:Bamb_6113 hypothetical protein YP_001765649.1 KEGG: bam:Bamb_2381 G-T/U mismatch-specific DNA glycosylase-like protein YP_001765650.1 PFAM: Chorismate lyase; KEGG: bur:Bcep18194_A5685 chorismate lyase YP_001765651.1 molecular chaperone YP_001765652.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bur:Bcep18194_A5687 transcriptional regulator, GntR family with aminotransfersase activity YP_001765653.1 KEGG: bur:Bcep18194_A5688 hypothetical protein YP_001765654.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_A5689 protein of unknown function DUF6, transmembrane YP_001765655.1 PFAM: aminotransferase class I and II; KEGG: bur:Bcep18194_A5690 aminotransferase, class I and II YP_001765656.1 PFAM: Endoribonuclease L-PSP; KEGG: bam:Bamb_2388 endoribonuclease L-PSP YP_001765657.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: bur:Bcep18194_A5692 phenazine biosynthesis PhzC/PhzF protein YP_001765658.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bam:Bamb_2390 diguanylate cyclase/phosphodiesterase YP_001765659.1 PFAM: Chromate transporter; KEGG: bur:Bcep18194_A5694 chromate transport protein ChrA-like YP_001765660.1 PFAM: transmembrane pair domain protein; KEGG: bur:Bcep18194_A5695 transmembrane protein YP_001765661.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A5696 transcriptional regulator, LysR family YP_001765662.1 KEGG: bvi:Bcep1808_2445 integral membrane protein-like protein YP_001765663.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_001765664.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_001765665.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_2448 ABC transporter related YP_001765666.1 KEGG: bmu:Bmul_0917 hypothetical protein YP_001765667.1 KEGG: bam:Bamb_2412 hypothetical protein YP_001765668.1 PFAM: O-methyltransferase family 3; KEGG: bur:Bcep18194_C6637 O-methyltransferase, family 3 YP_001765669.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bur:Bcep18194_C6638 4Fe-4S ferredoxin, iron-sulfur binding YP_001765670.1 KEGG: bur:Bcep18194_C6639 hypothetical protein YP_001765671.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bur:Bcep18194_C6640 sigma-24 (FecI-like) YP_001765672.1 KEGG: bur:Bcep18194_A5710 hypothetical protein YP_001765673.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_A5711 short-chain dehydrogenase/reductase SDR YP_001765674.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_A5712 transcriptional regulator, TetR family YP_001765675.1 serine protease inhibitor, inhibits trypsin and other proteases YP_001765676.1 KEGG: bur:Bcep18194_A5714 hypothetical protein YP_001765677.1 KEGG: bur:Bcep18194_A5715 hypothetical protein YP_001765678.1 KEGG: bam:Bamb_2435 hypothetical protein YP_001765679.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5717 major facilitator superfamily (MFS_1) transporter YP_001765680.1 KEGG: bur:Bcep18194_A5718 ATPase-like YP_001765681.1 KEGG: bur:Bcep18194_A5719 alpha,alpha-trehalose-phosphate synthase (UDP-forming); TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase family 20 YP_001765682.1 KEGG: bur:Bcep18194_A5721 hypothetical protein YP_001765683.1 KEGG: bam:Bamb_2441 hypothetical protein YP_001765684.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_2442 ABC transporter related YP_001765685.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_2443 binding-protein-dependent transport systems inner membrane component YP_001765686.1 KEGG: bmu:Bmul_0891 hypothetical protein YP_001765687.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_A5727 periplasmic sensor signal transduction histidine kinase YP_001765688.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_A5728 two component transcriptional regulator, winged helix family YP_001765689.1 KEGG: bur:Bcep18194_A5729 hypothetical protein YP_001765690.1 PFAM: Pirin domain protein; KEGG: bam:Bamb_2448 pirin domain protein domain protein YP_001765691.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_A5731 ABC lysine-arginine-ornithine family transporter, periplasmic ligand binding protein YP_001765692.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A5732 ABC amino acid transporter, inner membrane subunit YP_001765693.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A5733 ABC amino acid transporter, inner membrane subunit YP_001765694.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_2452 ABC transporter related YP_001765695.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A5735 GCN5-related N-acetyltransferase YP_001765696.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A5736 transcriptional regulator, LysR family YP_001765697.1 KEGG: bvi:Bcep1808_2498 outer membrane protein (porin)-like protein YP_001765698.1 PFAM: nitrogen regulatory protein P-II; KEGG: bmu:Bmul_0879 nitrogen regulatory protein P-II YP_001765699.1 NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers YP_001765700.1 PFAM: protein of unknown function DUF482; KEGG: bur:Bcep18194_A5740 protein of unknown function DUF482 YP_001765701.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: bam:Bamb_2459 beta-glucosidase YP_001765702.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_2460 transcriptional regulator, AraC family YP_001765703.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: bam:Bamb_2461 excinuclease ABC, C subunit domain protein YP_001765704.1 catalyzes the hydrolysis of pyrophosphate to phosphate YP_001765705.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_A5745 aldehyde dehydrogenase (NAD+) YP_001765706.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_001765707.1 PFAM: major facilitator superfamily MFS_1; KEGG: bmu:Bmul_0872 major facilitator superfamily MFS_1 YP_001765708.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: bur:Bcep18194_A5748 excisionase/Xis, DNA-binding YP_001765709.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_A5749 alpha/beta hydrolase YP_001765710.1 PFAM: HemY domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_A5750 HemY-like protein YP_001765711.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane and the formation of precorrin-2 from uroporphyrin III and S-adenosyl-L-methionine by two sequential methylation reactions; functions in tetrapyrrole and heme biosynthesis YP_001765712.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis YP_001765713.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate YP_001765714.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_A5754 UbiE/COQ5 methyltransferase YP_001765715.1 SMART: helix-turn-helix domain protein; KEGG: bur:Bcep18194_A5755 transcriptional regulator, XRE family YP_001765716.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bmu:Bmul_5809 transposase IS116/IS110/IS902 family protein YP_001765717.1 catalyzes the formation of arginine from (N-L-arginino)succinate YP_001765718.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bvi:Bcep1808_2514 HAD-superfamily hydrolase, subfamily IA, variant 3 YP_001765719.1 KEGG: bur:Bcep18194_A5762 hypothetical protein YP_001765720.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: bur:Bcep18194_A5763 lysine decarboxylase YP_001765721.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis YP_001765722.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: bur:Bcep18194_A5765 copper/zinc superoxide dismutase YP_001765723.1 PFAM: Cobyrinic acid ac-diamide synthase; protein of unknown function DUF59; KEGG: bvi:Bcep1808_2519 cobyrinic acid a,c-diamide synthase YP_001765724.1 PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: bam:Bamb_2483 OmpA/MotB domain protein YP_001765725.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content YP_001765726.1 PFAM: protein of unknown function DUF490; KEGG: bur:Bcep18194_A5769 protein of unknown function DUF490 YP_001765727.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: bur:Bcep18194_A5770 surface antigen (D15) YP_001765728.1 KEGG: bur:Bcep18194_A5771 hypothetical protein YP_001765729.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: bur:Bcep18194_A5772 chromosome segregation and condensation protein ScpA YP_001765730.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine YP_001765731.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5) YP_001765732.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bam:Bamb_2491 cobyrinic acid a,c-diamide synthase YP_001765733.1 PFAM: DoxX family protein; KEGG: bur:Bcep18194_A5776 DoxX family membrane protein YP_001765734.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation YP_001765735.1 PFAM: cobalbumin biosynthesis protein; KEGG: bur:Bcep18194_A5778 cobalbumin biosynthesis enzyme YP_001765736.1 CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group YP_001765737.1 cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase YP_001765738.1 PFAM: periplasmic binding protein; KEGG: bur:Bcep18194_A5781 ABC Fe3+siderophore/cobalamin transporter, periplasmic ligand binding protein YP_001765739.1 TIGRFAM: alpha-ribazole phosphatase; PFAM: Phosphoglycerate mutase; KEGG: bur:Bcep18194_A5782 phosphoglycerate/bisphosphoglycerate mutase YP_001765740.1 catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole YP_001765741.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole YP_001765742.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A5785 ABC cobalamin/Fe3+-siderophore transporter, ATPase subunit YP_001765743.1 PFAM: transport system permease protein; KEGG: bur:Bcep18194_A5786 ABC cobalamin/Fe3+-siderophore transporter, inner membrane subunit YP_001765744.1 KEGG: bam:Bamb_2505 hypothetical protein YP_001765745.1 PFAM: protein of unknown function DUF710; KEGG: bam:Bamb_2506 protein of unknown function DUF710 YP_001765746.1 PFAM: protein of unknown function DUF55; KEGG: bam:Bamb_2507 protein of unknown function DUF55 YP_001765747.1 PFAM: protein of unknown function DUF541; KEGG: bur:Bcep18194_A5790 protein of unknown function DUF541 YP_001765748.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein YP_001765749.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A5792 transcriptional regulator, LysR family YP_001765750.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_001765751.1 PFAM: cytochrome c class I; KEGG: bur:Bcep18194_A5794 cytochrome c, class I YP_001765752.1 KEGG: bur:Bcep18194_A5795 hypothetical protein YP_001765753.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB YP_001765754.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides YP_001765755.1 PFAM: permease YjgP/YjgQ family protein; KEGG: bam:Bamb_2516 permease YjgP/YjgQ family protein YP_001765756.1 PFAM: permease YjgP/YjgQ family protein; KEGG: bur:Bcep18194_A5799 YjgP/YjgQ like transporter YP_001765757.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: bam:Bamb_2518 cobalamin (vitamin B12) biosynthesis CbiX protein YP_001765758.1 catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1 YP_001765759.1 KEGG: bam:Bamb_2520 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_001765760.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP YP_001765761.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite YP_001765762.1 PFAM: conserved hypothetical protein; KEGG: bvi:Bcep1808_2557 uncharacterised conserved protein UCP030820 YP_001765763.1 PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: bam:Bamb_2524 nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein YP_001765764.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_2559 transcriptional regulator CysB-like protein YP_001765765.1 KEGG: bmu:Bmul_0817 ABC branched chain amino acid family transporter, periplasmic ligand binding protein YP_001765766.1 PFAM: integrase family protein; KEGG: bpl:BURPS1106A_1442 phage integrase YP_001765767.1 PFAM: Primase 2; KEGG: bvi:Bcep1808_0426 inner membrane protein YP_001765768.1 KEGG: bvi:Bcep1808_0427 hypothetical protein YP_001765769.1 KEGG: bvi:Bcep1808_0428 hypothetical protein YP_001765770.1 KEGG: bvi:Bcep1808_0429 hypothetical protein YP_001765771.1 KEGG: bvi:Bcep1808_0430 hypothetical protein YP_001765772.1 KEGG: bvi:Bcep1808_0431 hypothetical protein YP_001765773.1 KEGG: bvi:Bcep1808_0432 hypothetical protein YP_001765774.1 KEGG: spq:SPAB_03436 hypothetical protein YP_001765777.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: bpm:BURPS1710b_1284 transposon Tn2501 resolvase YP_001765778.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pfo:Pfl_2769 short-chain dehydrogenase/reductase SDR YP_001765779.1 PFAM: regulatory protein TetR; KEGG: sma:SAV1541 TetR-family transcriptional regulator YP_001765780.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: eca:ECA2935 hypothetical protein YP_001765781.1 PFAM: helix-turn-helix HxlR type; KEGG: eca:ECA2934 putative transcriptional regulator YP_001765782.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5391 transcriptional regulator, LysR family YP_001765783.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bam:Bamb_5392 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein YP_001765784.1 PFAM: sodium:dicarboxylate symporter; KEGG: bxe:Bxe_A3356 sodium/dicarboxylate symporter YP_001765786.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_2561 transcriptional regulator, LysR family YP_001765787.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bvi:Bcep1808_2562 short-chain dehydrogenase/reductase SDR YP_001765788.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: bvi:Bcep1808_2563 short-chain dehydrogenase/reductase SDR YP_001765789.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_A5813 alpha/beta hydrolase YP_001765790.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A5814 transcriptional regulator, LysR family YP_001765791.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_2532 transcriptional regulator, LysR family YP_001765792.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_2533 short-chain dehydrogenase/reductase SDR YP_001765793.1 KEGG: bur:Bcep18194_A5817 hypothetical protein YP_001765794.1 PFAM: copper resistance protein CopC; KEGG: bur:Bcep18194_A5818 copper resistance protein CopC YP_001765795.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: bur:Bcep18194_A5819 pseudouridine synthase, Rsu YP_001765796.1 KEGG: bur:Bcep18194_A5820 hypothetical protein YP_001765797.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_A5821 NAD-dependent epimerase/dehydratase YP_001765798.1 catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose YP_001765799.1 DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine YP_001765800.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_2539 GCN5-related N-acetyltransferase YP_001765801.1 KEGG: bvi:Bcep1808_2571 hypothetical protein YP_001765802.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_2541 ABC transporter related YP_001765803.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_2573 ABC transporter related YP_001765804.1 PFAM: inner-membrane translocator; KEGG: bvi:Bcep1808_2574 inner-membrane translocator YP_001765805.1 PFAM: inner-membrane translocator; KEGG: bam:Bamb_2544 inner-membrane translocator YP_001765806.1 KEGG: bur:Bcep18194_A5830 hypothetical protein YP_001765807.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway YP_001765808.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: bam:Bamb_2547 peptidylprolyl isomerase, FKBP-type YP_001765809.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase YP_001765810.1 required for 70S ribosome assembly YP_001765811.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif YP_001765812.1 catalyzes the formation of oxaloacetate from L-aspartate YP_001765813.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide YP_001765814.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate YP_001765815.1 PFAM: fatty acid desaturase; KEGG: bvi:Bcep1808_2585 fatty acid desaturase YP_001765816.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bur:Bcep18194_A5840 MscS mechanosensitive ion channel YP_001765817.1 PFAM: Fmu (Sun) domain protein; KEGG: bur:Bcep18194_A5841 methylase YP_001765818.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate YP_001765819.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities YP_001765820.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme YP_001765821.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis YP_001765822.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine YP_001765823.1 catalyzes the formation of dUMP from dUTP YP_001765824.1 PFAM: protein of unknown function DUF347; KEGG: bur:Bcep18194_A5848 protein of unknown function DUF347 YP_001765825.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_A5849 amino acid transporter YP_001765826.1 KEGG: bam:Bamb_2566 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase YP_001765827.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA YP_001765828.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bur:Bcep18194_A5852 cold-shock DNA-binding domain protein YP_001765829.1 PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: bur:Bcep18194_A5853 multicopper oxidase, type 3 YP_001765830.1 KEGG: bam:Bamb_2570 hypothetical protein YP_001765831.1 KEGG: bur:Bcep18194_A5855 isocitrate dehydrogenase (NADP+); TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type YP_001765832.1 Converts isocitrate to alpha ketoglutarate YP_001765833.1 PFAM: pseudouridine synthase; KEGG: bur:Bcep18194_A5857 pseudouridine synthase, Rsu YP_001765834.1 PFAM: protein of unknown function DUF192; KEGG: bur:Bcep18194_A5859 protein of unknown function DUF192 YP_001765835.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_001765836.1 TIGRFAM: high-affinity nickel-transporter; KEGG: bur:Bcep18194_A5861 high-affinity nickel-transporter YP_001765837.1 KEGG: bur:Bcep18194_A5862 hypothetical protein YP_001765838.1 PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_A5863 aldo/keto reductase YP_001765839.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bur:Bcep18194_A5864 transcriptional regulator, GntR family YP_001765840.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_A5865 L-carnitine dehydratase/bile acid-inducible protein F YP_001765841.1 PFAM: regulatory protein MerR; Citrate synthase; KEGG: bam:Bamb_2582 citrate synthase YP_001765842.1 KEGG: bur:Bcep18194_A5866 hypothetical protein YP_001765843.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5867 drug resistance transporter EmrB/QacA subfamily YP_001765844.1 PFAM: EAL domain protein; KEGG: bur:Bcep18194_A5868 diguanylate phosphodiesterase (EAL domain) YP_001765845.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_A5869 hypothetical protein YP_001765846.1 catalyzes the formation of 2-dehydropantoate from (R)-pantoate YP_001765847.1 PFAM: protein of unknown function DUF962; KEGG: bam:Bamb_2588 protein of unknown function DUF962 YP_001765848.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: bur:Bcep18194_A5872 transcriptional regulator, Crp/Fnr family YP_001765849.1 TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: bur:Bcep18194_A5873 chromate transporter YP_001765850.1 PFAM: manganese and iron superoxide dismutase; KEGG: bur:Bcep18194_A5874 superoxide dismutase YP_001765851.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides YP_001765852.1 Transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate YP_001765853.1 PFAM: protein of unknown function DUF343; KEGG: bur:Bcep18194_A5877 protein of unknown function DUF343 YP_001765854.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS YP_001765855.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP YP_001765856.1 KEGG: bvi:Bcep1808_2642 hypothetical protein YP_001765857.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: bam:Bamb_2599 integral membrane protein MviN YP_001765858.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_001765859.1 KEGG: bvi:Bcep1808_2645 hypothetical protein YP_001765860.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation YP_001765861.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis YP_001765862.1 putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription YP_001765863.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX YP_001765864.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bur:Bcep18194_A5889 hypothetical protein YP_001765865.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_A5890 AMP-dependent synthetase and ligase YP_001765866.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs YP_001765867.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: bur:Bcep18194_A5892 methylated-DNA-(protein)-cysteine S-methyltransferase YP_001765868.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: bur:Bcep18194_A5893 4Fe-4S cluster binding protein YP_001765869.1 PFAM: protein of unknown function UPF0079; KEGG: bmu:Bmul_0734 protein of unknown function UPF0079 YP_001765870.1 PFAM: cell wall hydrolase/autolysin; KEGG: bur:Bcep18194_A5895 N-acetylmuramoyl-L-alanine amidase YP_001765871.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_A5896 protein of unknown function DUF6, transmembrane YP_001765872.1 PFAM: Pirin domain protein; KEGG: bur:Bcep18194_A5897 pirin-like protein YP_001765873.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: bur:Bcep18194_A5898 thioredoxin YP_001765874.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: bur:Bcep18194_A5899 UBA/ThiF-type NAD/FAD binding protein YP_001765875.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate YP_001765876.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_A5901 cyclopropane-fatty-acyl-phospholipid synthase YP_001765877.1 PFAM: protein of unknown function DUF72; KEGG: bur:Bcep18194_A5902 protein of unknown function DUF72 YP_001765878.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: bur:Bcep18194_A5903 protein-methionine-S-oxide reductase YP_001765880.1 PFAM: selenium-binding protein; KEGG: bam:Bamb_2621 selenium-binding protein YP_001765881.1 KEGG: bur:Bcep18194_A5905 hypothetical protein YP_001765882.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bur:Bcep18194_A5906 flavin reductase-like, FMN-binding YP_001765883.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bam:Bamb_2624 transcriptional regulator, AsnC family YP_001765884.1 TIGRFAM: arylformamidase; PFAM: cyclase family protein; KEGG: bam:Bamb_2625 cyclase family protein YP_001765885.1 TIGRFAM: kynureninase; PFAM: aminotransferase class V; KEGG: bur:Bcep18194_A5909 kynureninase YP_001765886.1 TIGRFAM: tryptophan 2,3-dioxygenase; PFAM: tryptophan 23-dioxygenase; KEGG: bmu:Bmul_0718 tryptophan 2,3-dioxygenase YP_001765887.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_2628 major facilitator superfamily MFS_1 YP_001765888.1 KEGG: bur:Bcep18194_A5912 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; Ketopantoate reductase ApbA/PanE domain protein YP_001765889.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_A5913 aldehyde dehydrogenase YP_001765890.1 catalyzes the formation of benzaldehyde from benzoylformate YP_001765891.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A5915 transcriptional regulator, LysR family YP_001765892.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: bam:Bamb_2633 mannitol dehydrogenase, C-terminal domain YP_001765893.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: bur:Bcep18194_A5917 xylulokinase YP_001765894.1 PFAM: putative sugar-binding domain protein; KEGG: bur:Bcep18194_A5918 transcriptional regulator, DeoR family YP_001765895.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_2636 major facilitator superfamily MFS_1 YP_001765896.1 PFAM: beta-lactamase; KEGG: bam:Bamb_2637 beta-lactamase YP_001765897.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_2638 transcriptional regulator, LysR family YP_001765898.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_A5922 ABC sugar transporter, fused ATPase subunits YP_001765899.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bam:Bamb_2640 HAD-superfamily hydrolase, subfamily IA, variant 3 YP_001765900.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A5924 ABC sugar transporter, inner membrane subunit YP_001765901.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A5925 ABC sugar transporter, inner membrane subunit YP_001765902.1 PFAM: extracellular solute-binding protein family 1; KEGG: bur:Bcep18194_A5926 ABC sugar transporter, periplasmic ligand binding protein YP_001765903.1 KEGG: bam:Bamb_2644 tagatose-6-phosphate kinase; TIGRFAM: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ YP_001765904.1 PFAM: PfkB domain protein; KEGG: bur:Bcep18194_A5928 sugar kinase, ribokinase family YP_001765905.1 Converts D-sorbitol to L-sorbose YP_001765906.1 PFAM: ferric-uptake regulator; KEGG: bur:Bcep18194_A5930 ferric uptake regulator, FUR family YP_001765907.1 PFAM: periplasmic solute binding protein; KEGG: bur:Bcep18194_A5931 ABC heavy metal transporter, periplasmic ligand binding protein YP_001765908.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A5932 ABC heavy metal transporter, ATPase subunit YP_001765909.1 PFAM: ABC-3 protein; KEGG: bur:Bcep18194_A5933 ABC heavy metal transporter, inner membrane subunit YP_001765910.1 KEGG: bur:Bcep18194_A5934 carboxylesterase; TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase YP_001765911.1 TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_A5935 zinc-containing alcohol dehydrogenase superfamily YP_001765912.1 PFAM: carbohydrate kinase FGGY; KEGG: bur:Bcep18194_A5936 carbohydrate kinase, FGGY YP_001765913.1 TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bur:Bcep18194_A5937 xanthine/uracil transporter YP_001765914.1 KEGG: bvi:Bcep1808_2390 hypothetical protein YP_001765915.1 KEGG: bvi:Bcep1808_2389 hypothetical protein YP_001765916.1 KEGG: reh:H16_A3214 hypothetical protein YP_001765917.1 KEGG: kpn:KPN_01263 hypothetical protein YP_001765918.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_A5938 RND efflux system, outer membrane lipoprotein, NodT family YP_001765919.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bvi:Bcep1808_2722 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family YP_001765920.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bur:Bcep18194_A5940 secretion protein HlyD family YP_001765921.1 PFAM: regulatory protein TetR; Tetracycline transcriptional repressor MAATS-type domain protein; KEGG: bur:Bcep18194_A5941 transcriptional regulator, TetR family YP_001765922.1 PFAM: isochorismatase hydrolase; KEGG: bur:Bcep18194_A5942 isochorismatase hydrolase YP_001765923.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_A5943 transcriptional regulator, AraC family YP_001765924.1 PFAM: carbon monoxide dehydrogenase subunit G; KEGG: bur:Bcep18194_A5944 carbon monoxide dehydrogenase subunit G YP_001765925.1 PFAM: protein of unknown function DUF427; KEGG: bur:Bcep18194_A5945 protein of unknown function DUF427 YP_001765926.1 KEGG: bur:Bcep18194_A5946 hypothetical protein YP_001765927.1 KEGG: bur:Bcep18194_A5947 peptidase S1C, Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_001765928.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_A5948 periplasmic sensor signal transduction histidine kinase YP_001765929.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_A5949 two component transcriptional regulator, winged helix family YP_001765930.1 KEGG: bur:Bcep18194_A5950 serine-type D-Ala-D-Ala carboxypeptidase; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C YP_001765931.1 PFAM: fatty acid hydroxylase; KEGG: bur:Bcep18194_A5951 sterol desaturase-like YP_001765932.1 KEGG: bvi:Bcep1808_2736 phospholipase/lecithinase/hemolysin-like protein YP_001765933.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: bur:Bcep18194_A5953 SUA5/YciO/YrdC/YwlC YP_001765934.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway YP_001765935.1 KEGG: bur:Bcep18194_A5955 phosphoribosylaminoimidazole carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_001765936.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase YP_001765937.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis YP_001765938.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_001765939.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway YP_001765940.1 PFAM: branched-chain amino acid transport; KEGG: bur:Bcep18194_A5960 protein of unknown function DUF931 YP_001765941.1 PFAM: AzlC family protein; KEGG: bur:Bcep18194_A5961 AzlC-like efflux pump YP_001765942.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids YP_001765943.1 KEGG: bmu:Bmul_0666 hypothetical protein YP_001765944.1 TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; KEGG: bur:Bcep18194_A5964 lipopolysaccharide heptosyltransferase II YP_001765945.1 KEGG: bam:Bamb_2681 hypothetical protein YP_001765946.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_A5966 alpha/beta hydrolase YP_001765947.1 KEGG: bur:Bcep18194_A5967 hypothetical protein YP_001765948.1 PFAM: peptidase M48 Ste24p; KEGG: bur:Bcep18194_A5968 peptidase M48, Ste24p YP_001765949.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis YP_001765950.1 TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: bam:Bamb_2686 rhs element Vgr protein YP_001765951.1 KEGG: bam:Bamb_2687 hypothetical protein YP_001765952.1 PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: bvi:Bcep1808_2754 glycosyl hydrolase, BNR repeat-containing protein YP_001765953.1 PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: bam:Bamb_2689 hypothetical protein YP_001765954.1 KEGG: bam:Bamb_2690 hypothetical protein YP_001765955.1 TIGRFAM: TonB family protein; KEGG: bur:Bcep18194_A5971 TonB-like protein YP_001765956.1 PFAM: O-antigen polymerase; KEGG: bur:Bcep18194_A5972 O-antigen polymerase YP_001765957.1 KEGG: bur:Bcep18194_A5973 general secretion pathway protein H YP_001765958.1 PFAM: Integral membrane protein TerC; KEGG: bur:Bcep18194_A5974 integral membrane protein TerC YP_001765959.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle YP_001765960.1 catalyzes the interconversion of succinyl-CoA and succinate YP_001765961.1 KEGG: bam:Bamb_2697 hypothetical protein YP_001765962.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities YP_001765963.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs YP_001765964.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bam:Bamb_2700 two component transcriptional regulator, winged helix family YP_001765965.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: bur:Bcep18194_A5981 periplasmic sensor signal transduction histidine kinase YP_001765966.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_2766 major facilitator superfamily MFS_1 YP_001765967.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A5984 transcriptional regulator, LysR family YP_001765968.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_A5985 transcriptional regulator, AraC family YP_001765969.1 PFAM: ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_A5986 ThiJ/PfpI family protein YP_001765970.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bam:Bamb_2706 cupin 2, conserved barrel domain protein YP_001765971.1 KEGG: bur:Bcep18194_A5988 hypothetical protein YP_001765972.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_2712 transcriptional regulator, LysR family YP_001765973.1 PFAM: glycosyl transferase family 51; KEGG: bur:Bcep18194_A5990 glycosyl transferase, family 51 YP_001765974.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bam:Bamb_2716 glutathione-dependent formaldehyde-activating, GFA YP_001765975.1 PFAM: protein of unknown function DUF1272; KEGG: bam:Bamb_2717 protein of unknown function DUF1272 YP_001765976.1 PFAM: GntR domain protein; KEGG: bur:Bcep18194_A5993 transcriptional regulator, GntR family YP_001765977.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bur:Bcep18194_A5994 mandelate racemase/muconate lactonizing enzyme YP_001765978.1 PFAM: copper resistance D domain protein; KEGG: bur:Bcep18194_A5995 copper resistance D YP_001765979.1 KEGG: bmu:Bmul_0629 cytochrome c, class I YP_001765980.1 PFAM: cytochrome c class I; KEGG: bur:Bcep18194_A5997 cytochrome c, class I YP_001765981.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bur:Bcep18194_A5998 DEAD/DEAH box helicase YP_001765982.1 KEGG: bur:Bcep18194_A5999 hypothetical protein YP_001765983.1 KEGG: bur:Bcep18194_A6000 hypothetical protein YP_001765984.1 PFAM: gamma-glutamyltranspeptidase; KEGG: bam:Bamb_2726 gamma-glutamyltransferase YP_001765985.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: bur:Bcep18194_A6002 transcriptional regulator, DeoR family YP_001765986.1 KEGG: bam:Bamb_2728 hypothetical protein YP_001765987.1 KEGG: bur:Bcep18194_A6004 hypothetical protein YP_001765988.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane YP_001765989.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP YP_001765990.1 TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: bur:Bcep18194_A6007 aquaporin YP_001765991.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_A6008 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001765992.1 TIGRFAM: Rieske [2Fe-2S] domain protein, MocE subfamily; PFAM: Rieske [2Fe-2S] domain protein; KEGG: bur:Bcep18194_A6009 Rieske (2Fe-2S) protein YP_001765993.1 PFAM: fatty acid desaturase; KEGG: bur:Bcep18194_A6010 fatty acid desaturase YP_001765994.1 PFAM: regulatory protein LacI; KEGG: bur:Bcep18194_A6011 regulatory protein, LacI YP_001765995.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bur:Bcep18194_A6012 hypothetical protein YP_001765996.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bur:Bcep18194_A6013 xylose isomerase-like TIM barrel YP_001765997.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bur:Bcep18194_A6014 myo-inositol 2-dehydrogenase YP_001765998.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bur:Bcep18194_A6015 HAD-superfamily hydrolase subfamily IA, variant 3 YP_001765999.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; KEGG: bur:Bcep18194_A6016 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001766000.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_A6018 transcriptional regulator, XRE family YP_001766001.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_2744 major facilitator superfamily MFS_1 YP_001766002.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_2745 transcriptional regulator, LysR family YP_001766003.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) YP_001766004.1 PFAM: PhoH family protein; KEGG: bam:Bamb_2747 PhoH family protein YP_001766005.1 contains unknown N-terminal domain/putative metalloprotease C-terminal domain YP_001766006.1 PFAM: ChaC family protein; AIG2 family protein; KEGG: bam:Bamb_2749 ChaC family protein YP_001766007.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: bur:Bcep18194_A6025 putative Mg2+ and Co2+ transporter CorC YP_001766008.1 Transfers the fatty acyl group on membrane lipoproteins YP_001766009.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_A6027 TPR repeat protein YP_001766010.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA YP_001766011.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA YP_001766012.1 Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate YP_001766013.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: bur:Bcep18194_A6031 phospholipid/glycerol acyltransferase YP_001766014.1 PFAM: protein of unknown function DUF45; KEGG: bur:Bcep18194_A6032 protein of unknown function DUF45 YP_001766015.1 KEGG: bmu:Bmul_0593 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_001766016.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_A6034 protein of unknown function DUF6, transmembrane YP_001766017.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin YP_001766018.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate) YP_001766019.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: bur:Bcep18194_A6037 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001766020.1 PFAM: Organic solvent tolerance protein; KEGG: bur:Bcep18194_A6038 organic solvent tolerance protein YP_001766021.1 PFAM: aminoglycoside phosphotransferase; KEGG: bur:Bcep18194_A6039 aminoglycoside phosphotransferase YP_001766022.1 PFAM: Nucleotidyl transferase; KEGG: bur:Bcep18194_A6040 nucleotidyl transferase YP_001766023.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A6041 ABC transporter, fused ATPase and innermembrane subunits YP_001766024.1 PFAM: thioesterase superfamily protein; KEGG: bur:Bcep18194_A6042 thioesterase superfamily YP_001766025.1 PFAM: conserved hypothetical protein; KEGG: bam:Bamb_2768 hypothetical protein YP_001766026.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: bur:Bcep18194_A6044 formate dehydrogenase, subunit FdhD YP_001766027.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001766028.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001766029.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bur:Bcep18194_A6047 3-hydroxyacyl-CoA dehydrogenase YP_001766030.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bvi:Bcep1808_2827 acyl-CoA dehydrogenase domain protein YP_001766031.1 PFAM: regulatory protein TetR; KEGG: bvi:Bcep1808_2828 transcriptional regulator, TetR family YP_001766032.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: bam:Bamb_2774 phospholipase D/transphosphatidylase YP_001766033.1 converts dATP to dAMP and pyrophosphate YP_001766034.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes YP_001766035.1 PFAM: protein of unknown function DUF502; KEGG: bmu:Bmul_0573 protein of unknown function DUF502 YP_001766036.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: bur:Bcep18194_A6054 hypothetical protein YP_001766037.1 PFAM: thiopurine S-methyltransferase; Methyltransferase type 12; KEGG: bam:Bamb_2779 thiopurine S-methyltransferase YP_001766038.1 an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions YP_001766039.1 PFAM: Sterol-binding domain protein; KEGG: bur:Bcep18194_A6057 protein of unknown function DUF1243 YP_001766040.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: bur:Bcep18194_A6058 putative transporter YP_001766041.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone YP_001766042.1 PFAM: protein of unknown function DUF971; KEGG: bvi:Bcep1808_2839 protein of unknown function DUF971 YP_001766043.1 PFAM: histidine triad (HIT) protein; KEGG: bur:Bcep18194_A6061 histidine triad (HIT) protein YP_001766044.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: bur:Bcep18194_A6062 hypothetical protein YP_001766045.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway YP_001766046.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis YP_001766047.1 PFAM: Endoribonuclease L-PSP; KEGG: bam:Bamb_2789 endoribonuclease L-PSP YP_001766048.1 PFAM: amidohydrolase; D-aminoacylase domain protein; Amidohydrolase 3; KEGG: bur:Bcep18194_A6068 N-acyl-D-amino-acid deacylase YP_001766049.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bur:Bcep18194_A6069 transcriptional regulator, RpiR family YP_001766050.1 KEGG: bur:Bcep18194_A6070 amino acid aldolase or racemase-like YP_001766051.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_A6071 peptidase C56, PfpI YP_001766052.1 PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_A6072 transcriptional regulator, MarR family YP_001766053.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_2795 major facilitator superfamily MFS_1 YP_001766054.1 KEGG: bur:Bcep18194_A6074 hypothetical protein YP_001766055.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bur:Bcep18194_A6075 lipolytic enzyme YP_001766056.1 PFAM: CHRD domain containing protein; KEGG: bur:Bcep18194_A6077 CHRD domain protein YP_001766057.1 KEGG: bmu:Bmul_0549 hypothetical protein YP_001766058.1 PFAM: class II aldolase/adducin family protein; KEGG: bam:Bamb_2800 class II aldolase/adducin family protein YP_001766059.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: bam:Bamb_2801 phospholipase D/transphosphatidylase YP_001766060.1 KEGG: bam:Bamb_2802 GntR domain protein YP_001766061.1 PFAM: peptidase M48 Ste24p; KEGG: bur:Bcep18194_A6085 peptidase M48, Ste24p YP_001766062.1 KEGG: bur:Bcep18194_A6100 hypothetical protein YP_001766063.1 TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_A6101 acetoacetyl-CoA reductase YP_001766064.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis YP_001766065.1 TIGRFAM: phasin family protein; PFAM: Phasin family protein; KEGG: bur:Bcep18194_A6103 phasin YP_001766066.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bam:Bamb_2826 cobyrinic acid a,c-diamide synthase YP_001766067.1 responsible for recognizing base lesions in the genome and initiating base excision DNA repair YP_001766068.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: bur:Bcep18194_A6106 uracil-DNA glycosylase superfamily YP_001766069.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA YP_001766070.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A6108 major facilitator superfamily (MFS_1) transporter YP_001766071.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: bur:Bcep18194_A6109 excinuclease ABC, A subunit YP_001766072.1 KEGG: bam:Bamb_2840 putative transporter YP_001766073.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine YP_001766074.1 PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A6112 NUDIX hydrolase YP_001766075.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_A6113 lysine exporter family protein (LysE/YggA) YP_001766076.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis YP_001766077.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: bur:Bcep18194_A6115 sodium/hydrogen exchanger YP_001766078.1 KEGG: bur:Bcep18194_A6116 sugar isomerase, KpsF/GutQ family; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS) YP_001766079.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: bur:Bcep18194_A6117 phosphatase KdsC YP_001766080.1 PFAM: protein of unknown function DUF1239; KEGG: bmu:Bmul_0527 protein of unknown function DUF1239 YP_001766081.1 TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: bur:Bcep18194_A6119 OstA-like protein YP_001766082.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A6120 ABC transporter, ATPase subunit YP_001766083.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen YP_001766084.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: bam:Bamb_2852 sigma 54 modulation protein/ribosomal protein S30EA YP_001766085.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bur:Bcep18194_A6123 putative PTS IIA-like nitrogen-regulatory protein PtsN YP_001766086.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system YP_001766087.1 PFAM: conserved hypothetical protein; KEGG: bur:Bcep18194_A6125 hypothetical protein YP_001766088.1 PFAM: peptidase S16 lon domain protein; KEGG: bur:Bcep18194_A6126 peptidase S16, lon-like YP_001766089.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: bur:Bcep18194_A6127 A/G-specific adenine glycosylase MutY YP_001766090.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases YP_001766091.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_A6129 TPR repeat protein YP_001766092.1 Incorporates lipoproteins in the outer membrane after they are released by the LolA protein YP_001766093.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis YP_001766094.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP YP_001766095.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response YP_001766096.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation YP_001766097.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_001766098.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bur:Bcep18194_A6136 4Fe-4S ferredoxin, iron-sulfur binding YP_001766099.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA YP_001766100.1 TIGRFAM: methyltransferase; PFAM: conserved hypothetical protein; KEGG: bur:Bcep18194_A6138 hypothetical protein YP_001766101.1 KEGG: bur:Bcep18194_A6139 cell division transporter substrate-binding protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_001766102.1 TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_A6140 maleylacetoacetate isomerase YP_001766103.1 PFAM: glycosyl transferase family 3; KEGG: bur:Bcep18194_A6141 hypothetical protein YP_001766104.1 KEGG: bam:Bamb_2872 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase YP_001766105.1 KEGG: bur:Bcep18194_A6143 hypothetical protein YP_001766106.1 KEGG: bur:Bcep18194_A6144 hypothetical protein YP_001766107.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters YP_001766108.1 KEGG: bur:Bcep18194_A6146 hypothetical protein YP_001766109.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bur:Bcep18194_A6147 cytochrome bd ubiquinol oxidase, subunit I YP_001766110.1 KEGG: bam:Bamb_2878 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_001766111.1 TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: bam:Bamb_2879 cyd operon protein YbgT YP_001766112.1 PFAM: Carbohydrate-binding chitobiase/hexosaminidase-type domain protein; Glycoside hydrolase, family 20, catalytic core; KEGG: bur:Bcep18194_A6150 beta-N-acetylhexosaminidase YP_001766113.1 TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: bur:Bcep18194_A6151 PTS system, N-acetylglucosamine-specific IIBC component YP_001766114.1 TIGRFAM: PTS system, glucose subfamily, IIA subunit; phosphocarrier, HPr family; phosphoenolpyruvate-protein phosphotransferase; PFAM: phosphocarrier HPr protein; PEP-utilizing protein; sugar-specific permease EIIA 1 domain; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: bur:Bcep18194_A6152 phosphoryl transfer system, HPr/phosphoenolpyruvate-protein phosphotransferase YP_001766115.1 PFAM: sugar isomerase (SIS); KEGG: bam:Bamb_2883 glutamine--fructose-6-phosphate transaminase (isomerizing) YP_001766116.1 KEGG: bam:Bamb_2884 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_001766117.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bam:Bamb_2885 transcriptional regulator, GntR family YP_001766118.1 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase. YP_001766119.1 KEGG: bam:Bamb_2887 hypothetical protein YP_001766120.1 KEGG: bam:Bamb_2888 hypothetical protein YP_001766121.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A6159 ABC transporter, ATPase subunit YP_001766122.1 PFAM: inner-membrane translocator; KEGG: bmu:Bmul_0473 inner-membrane translocator YP_001766123.1 PFAM: protein of unknown function DUF534; KEGG: bmu:Bmul_0472 protein of unknown function DUF534 YP_001766124.1 KEGG: bur:Bcep18194_A6162 hypothetical protein YP_001766125.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: bam:Bamb_2890 lipoprotein, YaeC family YP_001766126.1 PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: bur:Bcep18194_A6164 methyl-accepting chemotaxis sensory transducer YP_001766127.1 PFAM: YCII-related; KEGG: bur:Bcep18194_A6165 YCII-related protein YP_001766128.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; KEGG: bur:Bcep18194_A6166 electron transport protein SCO1/SenC YP_001766129.1 converts protoheme IX and farnesyl diphosphate to heme O YP_001766130.1 PFAM: cytochrome oxidase assembly; KEGG: bur:Bcep18194_A6168 cytochrome oxidase assembly YP_001766131.1 KEGG: bur:Bcep18194_A6169 hypothetical protein YP_001766132.1 KEGG: bur:Bcep18194_A6170 hypothetical protein YP_001766133.1 KEGG: bmu:Bmul_0462 hypothetical protein YP_001766134.1 PFAM: cytochrome c oxidase subunit III; KEGG: bur:Bcep18194_A6172 cytochrome c oxidase, subunit III YP_001766135.1 KEGG: bvi:Bcep1808_2943 hypothetical protein YP_001766136.1 involved in the insertion of copper into subunit I of cytochrome C oxidase YP_001766137.1 KEGG: bvi:Bcep1808_2945 hypothetical protein YP_001766138.1 KEGG: bam:Bamb_2901 cytochrome-c oxidase; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_001766139.1 TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; OmpA/MotB domain protein; cytochrome C oxidase subunit II transmembrane region; KEGG: bur:Bcep18194_A6176 cytochrome c oxidase, subunit II YP_001766140.1 KEGG: bur:Bcep18194_A6177 integral membrane protein-like YP_001766141.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_A6178 methylase involved in ubiquinone/menaquinone biosynthesis-like YP_001766142.1 KEGG: bur:Bcep18194_A6179 phosphoribosyltransferase YP_001766143.1 TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bur:Bcep18194_A6180 RNA methyltransferase TrmH, group 2 YP_001766144.1 PFAM: Appr-1-p processing domain protein; KEGG: bur:Bcep18194_A6181 Appr-1-p processing enzyme family YP_001766145.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate YP_001766146.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA YP_001766147.1 TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: bvi:Bcep1808_2955 glutaredoxin 3 YP_001766148.1 PFAM: Rhodanese domain protein; KEGG: bam:Bamb_2911 rhodanese domain protein YP_001766149.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate YP_001766150.1 KEGG: bur:Bcep18194_A6187 peptidase S41A; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41 YP_001766151.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: bur:Bcep18194_A6188 molybdopterin biosynthesis protein MoeB YP_001766152.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: bur:Bcep18194_A6189 phosphoenolpyruvate-protein phosphotransferase YP_001766153.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: bvi:Bcep1808_2961 phosphotransferase system, phosphocarrier protein HPr YP_001766154.1 PFAM: PTS system fructose subfamily IIA component; KEGG: bur:Bcep18194_A6191 PTS system fructose subfamily IIA component YP_001766155.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione YP_001766156.1 TIGRFAM: glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase GshA; KEGG: bam:Bamb_2919 glutamate--cysteine ligase YP_001766157.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: bur:Bcep18194_A6194 ammonium transporter YP_001766158.1 PFAM: nitrogen regulatory protein P-II; KEGG: bmu:Bmul_0437 nitrogen regulatory protein P-II YP_001766159.1 PFAM: protein of unknown function DUF526; KEGG: bam:Bamb_2922 protein of unknown function DUF526 YP_001766160.1 KEGG: bam:Bamb_2923 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001766161.1 KEGG: bur:Bcep18194_A6211 hypothetical protein YP_001766162.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bam:Bamb_2925 redoxin domain protein YP_001766163.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bur:Bcep18194_A6213 two component, sigma54 specific, transcriptional regulator, fis family YP_001766164.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_A6214 histidine kinase YP_001766165.1 involved in the transport of C4-dicarboxylates across the membrane YP_001766166.1 member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake YP_001766167.1 PFAM: protein of unknown function DUF485; KEGG: bur:Bcep18194_A6217 protein of unknown function DUF485 YP_001766168.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_A6218 L-carnitine dehydratase/bile acid-inducible protein F YP_001766169.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bam:Bamb_2932 acyl-CoA dehydrogenase domain protein YP_001766170.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bur:Bcep18194_A6220 acyl-CoA dehydrogenase YP_001766171.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bur:Bcep18194_A6221 3-hydroxyacyl-CoA dehydrogenase YP_001766172.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A6222 transcriptional regulator, LysR family YP_001766173.1 KEGG: bur:Bcep18194_A6223 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_001766174.1 PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bxe:Bxe_A1514 outer membrane protein, putative autotransporter and adhesin YP_001766175.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmu:Bmul_0421 binding-protein-dependent transport systems inner membrane component YP_001766176.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A6226 ABC taurine transporter, ATPase subunit YP_001766177.1 KEGG: bur:Bcep18194_A6227 ABC taurine transporter, periplasmic ligand binding protein; TIGRFAM: taurine ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3 YP_001766178.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_001766179.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein YP_001766180.1 KEGG: bur:Bcep18194_A6232 hypothetical protein YP_001766181.1 Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence YP_001766182.1 PFAM: protein of unknown function DUF493; KEGG: bur:Bcep18194_A6234 hypothetical protein YP_001766183.1 PFAM: aminotransferase class IV; KEGG: bam:Bamb_2942 aminotransferase, class IV YP_001766184.1 PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: bur:Bcep18194_A6236 serine-type D-Ala-D-Ala carboxypeptidase YP_001766185.1 KEGG: bur:Bcep18194_A6237 hydrolase of the alpha/beta superfamily-like YP_001766186.1 KEGG: bur:Bcep18194_A6238 ferredoxin-like YP_001766187.1 PFAM: VanZ family protein; KEGG: bur:Bcep18194_A6239 VanZ like protein YP_001766188.1 KEGG: bam:Bamb_2947 ABC-type uncharacterized transport system auxiliary component-like protein YP_001766189.1 PFAM: Mammalian cell entry related domain protein; KEGG: bur:Bcep18194_A6241 ABC transporter, periplasmic ligand binding protein YP_001766190.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A6242 ABC transporter, ATPase subunit YP_001766191.1 PFAM: protein of unknown function DUF140; KEGG: bur:Bcep18194_A6243 ABC transporter, inner membrane subunit YP_001766192.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: bur:Bcep18194_A6244 5'-nucleotidase-like YP_001766193.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: bur:Bcep18194_A6245 Sel1-like repeat protein YP_001766194.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bxe:Bxe_C0485 putative transposase IS116/IS110/IS902 YP_001766195.1 PFAM: transposase mutator type; KEGG: bvi:Bcep1808_1823 transposase, mutator type YP_001766196.1 KEGG: bmu:Bmul_2125 putative transmembrane protein YP_001766197.1 KEGG: bur:Bcep18194_B2977 hypothetical protein YP_001766198.1 KEGG: reu:Reut_A0552 hypothetical protein YP_001766199.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon YP_001766200.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP YP_001766201.1 KEGG: bur:Bcep18194_A6249 hypothetical protein YP_001766202.1 TIGRFAM: cytidyltransferase-related domain protein; rfaE bifunctional protein; PFAM: cytidylyltransferase; KEGG: bur:Bcep18194_A6250 ADP-heptose synthase bifunctional sugarkinase/adenylyltransferase YP_001766203.1 KEGG: bur:Bcep18194_A6251 hypothetical protein YP_001766204.1 PFAM: Patatin; KEGG: bur:Bcep18194_A6252 patatin YP_001766205.1 KEGG: bur:Bcep18194_A6253 hypothetical protein YP_001766206.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001766207.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bur:Bcep18194_A6255 fumarylacetoacetate (FAA) hydrolase YP_001766208.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bur:Bcep18194_A6256 transcriptional regulator, IclR family YP_001766209.1 KEGG: bur:Bcep18194_A6257 hypothetical protein YP_001766210.1 KEGG: bam:Bamb_2964 hypothetical protein YP_001766211.1 PFAM: homocysteine S-methyltransferase; KEGG: bam:Bamb_2965 methionine synthase YP_001766212.1 KEGG: bam:Bamb_2966 methionine synthase; TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein YP_001766213.1 PFAM: Domain of unknown function DUF1840; KEGG: bur:Bcep18194_A6261 hypothetical protein YP_001766214.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase YP_001766215.1 PFAM: Sporulation domain protein; KEGG: bam:Bamb_2969 sporulation domain protein YP_001766216.1 PFAM: DSBA oxidoreductase; KEGG: bur:Bcep18194_A6264 DsbA oxidoreductase YP_001766217.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_2971 short-chain dehydrogenase/reductase SDR YP_001766218.1 PFAM: extracellular solute-binding protein family 5; KEGG: bur:Bcep18194_A6266 ABC peptide transporter, periplasmic ligand binding protein YP_001766219.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A6267 ABC transporter, fused ATPase subunits YP_001766220.1 PFAM: beta-lactamase domain protein; KEGG: bur:Bcep18194_A6268 beta-lactamase-like YP_001766221.1 catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol YP_001766222.1 PFAM: carbonic anhydrase; KEGG: bam:Bamb_2976 carbonate dehydratase YP_001766223.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_A6271 short chain dehydrogenase YP_001766224.1 KEGG: bur:Bcep18194_A6272 hypothetical protein YP_001766225.1 KEGG: bur:Bcep18194_A6273 dienelactone hydrolase and related enzyme-like YP_001766226.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate YP_001766227.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine YP_001766228.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium YP_001766229.1 KEGG: bam:Bamb_2983 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB YP_001766230.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmu:Bmul_0370 transcriptional regulator, LysR family YP_001766231.1 PFAM: LamB/YcsF family protein; KEGG: bur:Bcep18194_A6280 hypothetical protein YP_001766232.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: bur:Bcep18194_A6281 hypothetical protein YP_001766233.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism YP_001766234.1 PFAM: Allophanate hydrolase subunit 1; KEGG: bur:Bcep18194_A6283 allophanate hydrolase subunit 1 YP_001766235.1 KEGG: bur:Bcep18194_A6284 allophanate hydrolase; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2 YP_001766236.1 KEGG: bur:Bcep18194_A6285 permease for cytosine/purines, uracil, thiamine, allantoin transporter YP_001766237.1 PFAM: CutC family protein; KEGG: bvi:Bcep1808_3030 CutC family protein YP_001766238.1 KEGG: bur:Bcep18194_A6288 hypothetical protein YP_001766239.1 KEGG: bur:Bcep18194_A6289 hypothetical protein YP_001766240.1 PFAM: EAL domain protein; KEGG: bur:Bcep18194_A6290 diguanylate phosphodiesterase (EAL domain) YP_001766241.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: bam:Bamb_2986 Na+/H+ antiporter YP_001766242.1 catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates YP_001766243.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: bur:Bcep18194_A6294 acetyltransferase (isoleucine patch superfamily) YP_001766244.1 PFAM: Glutathione S-transferase domain; KEGG: bmu:Bmul_2937 glutathione S-transferase domain YP_001766245.1 PFAM: Ion transport 2 domain protein ; K channel inward rectifier conserved region 2 domain protein; KEGG: bur:Bcep18194_A6296 K+ channel, inward rectifier YP_001766246.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bmu:Bmul_2940 sulfate ABC transporter, periplasmic sulfate-binding protein YP_001766247.1 TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: bur:Bcep18194_A6298 dihydrodipicolinate synthase subfamily YP_001766248.1 PFAM: PilT protein domain protein; KEGG: bur:Bcep18194_A6299 PilT protein-like YP_001766249.1 TIGRFAM: prevent-host-death family protein; KEGG: bur:Bcep18194_A6300 hypothetical protein YP_001766250.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A6301 transcriptional regulator, LysR family YP_001766251.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_2995 major facilitator superfamily MFS_1 YP_001766252.1 PFAM: Glutathione S-transferase domain; KEGG: bam:Bamb_2997 glutathione S-transferase, N-terminal domain YP_001766253.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_2998 transcriptional regulator, LysR family YP_001766254.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bam:Bamb_2999 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding YP_001766255.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: bam:Bamb_3000 molybdopterin dehydrogenase, FAD-binding YP_001766256.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bam:Bamb_3001 ferredoxin; (2Fe-2S)-binding domain protein YP_001766257.1 KEGG: bur:Bcep18194_A6305 hypothetical protein YP_001766258.1 PFAM: protein of unknown function DUF1234; KEGG: bur:Bcep18194_A6307 protein of unknown function DUF1234 YP_001766259.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bur:Bcep18194_A6308 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_001766260.1 catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA YP_001766261.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bur:Bcep18194_A6310 YbaK/prolyl-tRNA synthetase like protein YP_001766262.1 PFAM: protein of unknown function DUF1289; KEGG: bvi:Bcep1808_3050 protein of unknown function DUF1289 YP_001766263.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_A6312 protein of unknown function DUF6, transmembrane YP_001766264.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bur:Bcep18194_A6313 transcriptional regulator, AsnC family YP_001766265.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_A6314 alpha/beta hydrolase YP_001766266.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bur:Bcep18194_A6315 2-nitropropane dioxygenase, NPD YP_001766267.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A6316 transcriptional regulator, LysR family YP_001766268.1 PFAM: porin Gram-negative type; KEGG: bmu:Bmul_2963 porin gram-negative type YP_001766269.1 KEGG: bur:Bcep18194_A6318 hypothetical protein YP_001766270.1 PFAM: Bile acid:sodium symporter; KEGG: bur:Bcep18194_A6319 bile acid/sodium symporter YP_001766271.1 PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bur:Bcep18194_A6320 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) YP_001766272.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bam:Bamb_3019 transcriptional regulator, LacI family YP_001766273.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: bur:Bcep18194_A6322 N-acylglucosamine 2-epimerase YP_001766274.1 PFAM: PfkB domain protein; KEGG: bur:Bcep18194_A6323 sugar kinase, ribokinase family YP_001766275.1 KEGG: bvi:Bcep1808_3063 hypothetical protein YP_001766276.1 KEGG: bur:Bcep18194_A6325 hypothetical protein YP_001766277.1 PFAM: protein of unknown function DUF185; KEGG: bam:Bamb_3024 protein of unknown function DUF185 YP_001766278.1 KEGG: bur:Bcep18194_A6327 short-chain dehydrogenase/reductase SDR YP_001766279.1 KEGG: bam:Bamb_3026 dihydroneopterin aldolase YP_001766280.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs YP_001766281.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: bur:Bcep18194_A6330 UDP-N-acetylglucosamine pyrophosphorylase YP_001766282.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source YP_001766283.1 PFAM: protein of unknown function DUF1044; KEGG: bam:Bamb_3030 protein of unknown function DUF1044 YP_001766284.1 KEGG: bam:Bamb_3031 transcriptional regulator-like protein YP_001766285.1 KEGG: bur:Bcep18194_A6334 hypothetical protein YP_001766286.1 KEGG: bur:Bcep18194_A6335 hypothetical protein YP_001766287.1 PFAM: iron permease FTR1; KEGG: bvi:Bcep1808_3073 iron permease FTR1 YP_001766288.1 KEGG: bam:Bamb_3035 hypothetical protein YP_001766289.1 PFAM: Heavy metal transport/detoxification protein; KEGG: bur:Bcep18194_A6338 heavy metal transport/detoxification protein YP_001766290.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_A6339 aldehyde dehydrogenase (NAD+) YP_001766291.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bam:Bamb_3038 transcriptional regulator, XRE family with cupin sensor YP_001766292.1 PFAM: peptidase C26; KEGG: bur:Bcep18194_A6342 peptidase C26 YP_001766293.1 PFAM: glutamine synthetase catalytic region; KEGG: bur:Bcep18194_A6343 glutamate--ammonia ligase YP_001766294.1 PFAM: aminotransferase class-III; KEGG: bur:Bcep18194_A6344 putative aminotransferase YP_001766295.1 PFAM: extracellular solute-binding protein family 1; KEGG: bvi:Bcep1808_3082 extracellular solute-binding protein, family 1 YP_001766296.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_A6346 spermidine/putrescine ABC transporter, ATPase subunit YP_001766297.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2812 ABC spermidine/putrescine transporter, inner membrane subunit YP_001766298.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2811 ABC spermidine/putrescine transporter, inner membrane subunit YP_001766299.1 KEGG: bam:Bamb_3047 hypothetical protein YP_001766300.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A6350 FAD dependent oxidoreductase YP_001766301.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A6351 FAD dependent oxidoreductase YP_001766302.1 PFAM: protein of unknown function DUF799; KEGG: bmu:Bmul_2997 protein of unknown function DUF799 YP_001766303.1 KEGG: bvi:Bcep1808_3090 hypothetical protein YP_001766304.1 PFAM: Curli production assembly/transport component CsgG; KEGG: bvi:Bcep1808_3091 curli production assembly/transport component CsgG YP_001766305.1 TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: bur:Bcep18194_A6352 glutathione reductase YP_001766306.1 KEGG: bam:Bamb_3051 hypothetical protein YP_001766307.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_A6354 outer membrane protein, (porin) YP_001766308.1 PFAM: protein of unknown function DUF1275; KEGG: bam:Bamb_3053 protein of unknown function DUF1275 YP_001766309.1 PFAM: Chromate transporter; KEGG: bur:Bcep18194_A6356 chromate transporter YP_001766310.1 PFAM: Chromate transporter; KEGG: bur:Bcep18194_A6357 chromate transporter YP_001766311.1 Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence YP_001766312.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: bvi:Bcep1808_3098 uracil-xanthine permease YP_001766313.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes. YP_001766314.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook YP_001766315.1 PFAM: type IV pilus assembly PilZ; YcgR family protein; KEGG: bur:Bcep18194_A6362 YcgR family protein YP_001766316.1 Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space YP_001766317.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum YP_001766318.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Burkholderia thailandensis has 2 copies of this and other flagella genes YP_001766319.1 makes up the distal portion of the flagellar basal body rod YP_001766320.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod YP_001766321.1 the hook connects flagellar basal body to the flagellar filament YP_001766322.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production YP_001766323.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod YP_001766324.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod YP_001766325.1 required for the assembly of the flagellar basal body P-ring YP_001766326.1 KEGG: bur:Bcep18194_A6373 putative anti-sigma-28 factor, FlgM YP_001766327.1 PFAM: FlgN family protein; KEGG: bam:Bamb_3073 FlgN family protein YP_001766328.1 PFAM: peptidase M24; KEGG: bur:Bcep18194_A6376 peptidase M24 YP_001766329.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_A6377 transcriptional regulator, XRE family with cupin sensor domain YP_001766330.1 catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases YP_001766331.1 PFAM: Glutathione S-transferase domain; KEGG: bam:Bamb_3077 glutathione S-transferase, N-terminal domain YP_001766332.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: bur:Bcep18194_A6380 NAD-dependent epimerase/dehydratase YP_001766333.1 PFAM: Lytic transglycosylase catalytic; KEGG: bam:Bamb_3079 lytic transglycosylase, catalytic YP_001766334.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: bam:Bamb_3080 5-formyltetrahydrofolate cyclo-ligase YP_001766335.1 PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_A6383 putative transcriptional regulator YP_001766336.1 PFAM: Allophanate hydrolase subunit 1; KEGG: bur:Bcep18194_A6384 hypothetical protein YP_001766337.1 TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: bvi:Bcep1808_3123 UreA amidolyase related protein YP_001766338.1 PFAM: LamB/YcsF family protein; KEGG: bam:Bamb_3084 LamB/YcsF family protein YP_001766339.1 PFAM: GumN family protein; KEGG: bur:Bcep18194_A6387 GumN family protein YP_001766340.1 Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides YP_001766341.1 KEGG: bam:Bamb_3087 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001766342.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_3128 binding-protein-dependent transport systems inner membrane component YP_001766343.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A6391 oligopeptide/dipeptide ABC transporter, inner membrane subunit YP_001766344.1 PFAM: extracellular solute-binding protein family 5; KEGG: bam:Bamb_3090 extracellular solute-binding protein, family 5 YP_001766345.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_3091 general substrate transporter YP_001766346.1 PFAM: High potential iron-sulfur protein; KEGG: bam:Bamb_3092 high potential iron-sulfur protein YP_001766347.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A6395 FAD dependent oxidoreductase YP_001766348.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bur:Bcep18194_A6396 AAA ATPase, central region YP_001766349.1 PFAM: nitroreductase; KEGG: bvi:Bcep1808_3135 nitroreductase YP_001766350.1 KEGG: bam:Bamb_3095 hypothetical protein YP_001766351.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bur:Bcep18194_A6399 endonuclease/exonuclease/phosphatase YP_001766352.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bam:Bamb_3098 ferredoxin--NADP(+) reductase YP_001766353.1 PFAM: ATP-binding region ATPase domain protein; KEGG: bur:Bcep18194_A6402 putative signal transduction histidine kinase YP_001766354.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bur:Bcep18194_A6403 two component transcriptional regulator, LuxR family YP_001766355.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_A6404 amino acid transporter YP_001766356.1 PFAM: protein of unknown function DUF182; KEGG: bur:Bcep18194_A6406 protein of unknown function DUF182 YP_001766357.1 PFAM: PepSY-associated TM helix domain protein; KEGG: bur:Bcep18194_A6407 hypothetical protein YP_001766358.1 KEGG: bur:Bcep18194_A6408 putative flagellar protein FhlB YP_001766359.1 KEGG: bur:Bcep18194_A6409 hypothetical protein YP_001766360.1 KEGG: bur:Bcep18194_A6410 hypothetical protein YP_001766361.1 PFAM: flagellar protein FliS; KEGG: bur:Bcep18194_A6411 flagellar protein FliS YP_001766362.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: bur:Bcep18194_A6412 flagellar hook-basal body complex protein FliE YP_001766363.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod YP_001766364.1 One of three proteins involved in switching the direction of the flagellar rotation YP_001766365.1 binds to and inhibits the function of flagella specific ATPase FliI YP_001766366.1 KEGG: bur:Bcep18194_A6416 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase YP_001766367.1 TIGRFAM: flagellar export protein FliJ; PFAM: flagellar FliJ protein; KEGG: bur:Bcep18194_A6417 flagellar FliJ and related YP_001766368.1 PFAM: flagellar hook-length control protein; KEGG: bur:Bcep18194_A6418 flagellar hook-length control protein YP_001766369.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bur:Bcep18194_A6419 glucose-methanol-choline oxidoreductase YP_001766370.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_A6421 aldehyde dehydrogenase YP_001766371.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages YP_001766372.1 KEGG: bmn:BMA10247_3412 hypothetical protein YP_001766373.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_A6425 protein of unknown function DUF6, transmembrane YP_001766374.1 KEGG: bvi:Bcep1808_3161 hypothetical protein YP_001766375.1 PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_A6427 aldo/keto reductase YP_001766376.1 KEGG: bur:Bcep18194_A6428 hypothetical protein YP_001766377.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: bur:Bcep18194_A6429 phytanoyl-CoA dioxygenase YP_001766378.1 KEGG: bam:Bamb_3128 hypothetical protein YP_001766379.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase YP_001766380.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA YP_001766381.1 TIGRFAM: addiction module antidote protein, HigA family; KEGG: bur:Bcep18194_A6433 putative plasmid maintenance system antidote protein, XRE family YP_001766382.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate YP_001766383.1 PFAM: protein of unknown function DUF484; KEGG: bam:Bamb_3132 protein of unknown function DUF484 YP_001766384.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs YP_001766385.1 SMART: PUA domain containing protein; KEGG: bam:Bamb_3134 PUA domain containing protein YP_001766386.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bam:Bamb_3135 cobalamin synthesis protein, P47K YP_001766387.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: bam:Bamb_3137 transcriptional regulators, TraR/DksA family YP_001766388.1 heat shock protein involved in degradation of misfolded proteins YP_001766389.1 heat shock protein involved in degradation of misfolded proteins YP_001766390.1 PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: bur:Bcep18194_A6444 two component transcriptional regulator, fis family YP_001766391.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_A6445 periplasmic sensor signal transduction histidine kinase YP_001766392.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate YP_001766393.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bur:Bcep18194_A6448 HAD-superfamily hydrolase subfamily IA, variant 3 YP_001766394.1 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly YP_001766395.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine YP_001766396.1 TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_A6451 methionine biosynthesis MetW YP_001766397.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A6452 major facilitator superfamily (MFS_1) transporter YP_001766398.1 PFAM: peptidase M48 Ste24p; KEGG: bur:Bcep18194_A6453 peptidase M48, Ste24p YP_001766399.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: bur:Bcep18194_A6454 transcriptional regulator, AraC family YP_001766400.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bam:Bamb_3159 alcohol dehydrogenase, zinc-binding domain protein YP_001766401.1 KEGG: bur:Bcep18194_A6456 exodeoxyribonuclease III xth; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase YP_001766402.1 PFAM: protein of unknown function DUF344; KEGG: bur:Bcep18194_A6457 protein of unknown function DUF344 YP_001766403.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_001766404.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_001766405.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain YP_001766406.1 functions in MreBCD complex in some organisms YP_001766407.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall YP_001766408.1 TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; KEGG: bam:Bamb_3167 rod shape-determining protein MreD YP_001766409.1 KEGG: bur:Bcep18194_A6464 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_001766410.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: bur:Bcep18194_A6465 rod shape-determining protein RodA YP_001766411.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: bur:Bcep18194_A6466 Sel1-like repeat protein YP_001766412.1 PFAM: HpcH/HpaI aldolase; KEGG: bur:Bcep18194_A6467 2-dehydro-3-deoxyglucarate aldolase YP_001766413.1 TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: bur:Bcep18194_A6468 6-pyruvoyl tetrahydropterin synthase and hypothetical protein YP_001766414.1 KEGG: bur:Bcep18194_A6469 organic radical activating enzyme-like YP_001766415.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: bam:Bamb_3174 ExsB protein YP_001766416.1 PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: bur:Bcep18194_A6471 two component transcriptional regulator, fis family YP_001766417.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: bur:Bcep18194_A6472 multi-sensor signal transduction histidine kinase YP_001766418.1 KEGG: bur:Bcep18194_A6473 hypothetical protein YP_001766419.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; KEGG: bur:Bcep18194_A6474 Fmu, rRNA SAM-dependent methyltransferase YP_001766420.1 PFAM: peptidase M48 Ste24p; KEGG: bur:Bcep18194_A6475 heat shock protein HtpX YP_001766421.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bam:Bamb_3180 lysine exporter protein (LysE/YggA) YP_001766422.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth YP_001766423.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) YP_001766424.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: bur:Bcep18194_A6479 smf protein YP_001766425.1 PFAM: Thioredoxin domain; KEGG: bvi:Bcep1808_3288 thioredoxin domain YP_001766426.1 decatenates replicating daughter chromosomes YP_001766427.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A6482 transcriptional regulator, LysR family YP_001766428.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bmu:Bmul_3129 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_001766429.1 PFAM: Patatin; KEGG: bur:Bcep18194_A6484 patatin YP_001766430.1 PFAM: thioesterase superfamily protein; KEGG: bur:Bcep18194_A6485 phenylacetic acid degradation-related protein YP_001766431.1 KEGG: bur:Bcep18194_A6486 hypothetical protein YP_001766432.1 PFAM: protein of unknown function DUF1470; KEGG: bam:Bamb_3191 protein of unknown function DUF1470 YP_001766433.1 PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_3192 alpha/beta hydrolase fold YP_001766434.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A6489 ABC amino acid transporter, ATPase subunit YP_001766435.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A6490 amino acid ABC transporter, inner membrane subunit YP_001766436.1 PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: bur:Bcep18194_A6491 ABC amino acid transporter, periplasmic ligand binding protein YP_001766437.1 TIGRFAM: phosphonoacetaldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_3193 aldehyde dehydrogenase YP_001766438.1 TIGRFAM: phosphonoacetate hydrolase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: bur:Bcep18194_A6493 type I phosphodiesterase/nucleotide pyrophosphatase YP_001766439.1 TIGRFAM: 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component; PFAM: extracellular solute-binding protein family 1; KEGG: bur:Bcep18194_A6494 ABC Fe3+ siderophore transporter, periplasmic ligand binding protein YP_001766440.1 TIGRFAM: 2-aminoethylphosphonate ABC transport system, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A6496 ABC Fe3+ siderophore transporter, inner membrane subunit YP_001766441.1 catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate YP_001766442.1 TIGRFAM: aminophosphonate oxidoreductase; PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A6498 FAD dependent oxidoreductase YP_001766443.1 TIGRFAM: phosphonate utilization associated transcriptional regulator; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bmu:Bmul_3140 transcriptional regulator, GntR family YP_001766444.1 KEGG: bur:Bcep18194_A6500 phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756 YP_001766445.1 TIGRFAM: aminoethylphosphonate catabolism associated LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A6501 transcriptional regulator, LysR family YP_001766446.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: bur:Bcep18194_A6502 L-lactate transporter YP_001766447.1 KEGG: bur:Bcep18194_A6504 hypothetical protein YP_001766448.1 involved in the first step of glutathione biosynthesis YP_001766449.1 PFAM: HhH-GPD family protein; AlkA domain protein; KEGG: bur:Bcep18194_A6507 3-methyladenine DNA glycosylase/8-oxoguanineDNA glycosylase YP_001766450.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; methylguanine DNA methyltransferase ribonuclease domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: bur:Bcep18194_A6508 transcriptional regulator, AraC family YP_001766451.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bam:Bamb_3206 glyoxalase/bleomycin resistance protein/dioxygenase YP_001766452.1 PFAM: YaeQ family protein; KEGG: bur:Bcep18194_A6510 YaeQ family protein YP_001766453.1 KEGG: bur:Bcep18194_A6511 hypothetical protein YP_001766454.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A6513 GCN5-related N-acetyltransferase YP_001766455.1 KEGG: bam:Bamb_3210 hypothetical protein YP_001766456.1 KEGG: bur:Bcep18194_A6514 hypothetical protein YP_001766457.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bur:Bcep18194_A6515 diguanylate cyclase (GGDEF domain) YP_001766458.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE YP_001766459.1 KEGG: bmu:Bmul_3153 hypothetical protein YP_001766460.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria YP_001766461.1 PFAM: protein of unknown function DUF37; KEGG: bam:Bamb_3216 protein of unknown function DUF37 YP_001766462.1 TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: bur:Bcep18194_A6522 ribonuclease P protein YP_001766463.1 in Escherichia coli transcription of this gene is enhanced by polyamines YP_001773632.1 PFAM: regulatory protein LysR; KEGG: bur:Bcep18194_C7002 transcriptional regulator, LysR family YP_001773633.1 PFAM: phosphate-starvation-inducible E; KEGG: bam:Bamb_5664 phosphate-starvation-inducible E YP_001773634.1 KEGG: bur:Bcep18194_C7004 membrane protein YP_001773635.1 KEGG: bur:Bcep18194_C7005 hypothetical protein YP_001773636.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bur:Bcep18194_C7006 transcriptional regulator GntR family with aminotransferase domain YP_001773637.1 Catalyzes the reversible two-electron oxidation of formate to carbon dioxide. It allows the assimilation of carbon dioxide and provides energy for growth through oxidative phosphorylation coupled to the reduction of oxygen, nitrate, sulphate or fumarate YP_001773638.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] domain protein; KEGG: bur:Bcep18194_C7008 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001773639.1 KEGG: bur:Bcep18194_C7009 hypothetical protein YP_001773640.1 KEGG: bur:Bcep18194_C7010 hypothetical protein YP_001773641.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bur:Bcep18194_C7011 multiple antibiotic resistance (MarC)-related proteins YP_001773642.1 KEGG: bur:Bcep18194_C7012 hypothetical protein YP_001773643.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bam:Bamb_5660 alcohol dehydrogenase GroES domain protein YP_001773644.1 PFAM: protein of unknown function DUF326; KEGG: bvi:Bcep1808_5688 protein of unknown function DUF326 YP_001773645.1 KEGG: bmu:Bmul_5434 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein YP_001773646.1 KEGG: bam:Bamb_5657 hypothetical protein YP_001773647.1 PFAM: transport-associated; KEGG: bam:Bamb_5656 transport-associated YP_001773648.1 PFAM: ABC transporter transmembrane region; response regulator receiver; ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_5655 response regulator receiver protein YP_001773649.1 KEGG: bmu:Bmul_5438 hypothetical protein YP_001773650.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_5653 short-chain dehydrogenase/reductase SDR YP_001773651.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bam:Bamb_5652 histidinol-phosphate phosphatase family protein YP_001773652.1 PFAM: glycosyl transferase family 9; KEGG: bvi:Bcep1808_5696 glycosyl transferase, family 9 YP_001773653.1 PFAM: Carbamoyltransferase; KEGG: bam:Bamb_5650 carbamoyltransferase YP_001773654.1 PFAM: glycosyl transferase family 2; KEGG: bam:Bamb_5649 glycosyl transferase, family 2 YP_001773655.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: bam:Bamb_3435 transposase, IS605 OrfB family YP_001773656.1 PFAM: glycosyl transferase family 9; KEGG: bam:Bamb_5648 glycosyl transferase, family 9 YP_001773657.1 PFAM: glycosyl transferase group 1; KEGG: bam:Bamb_5647 glycosyl transferase, group 1 YP_001773658.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bam:Bamb_5646 sigma54 specific transcriptional regulator, fis family YP_001773659.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bmu:Bmul_5447 two component, sigma54 specific, transcriptional regulator, fis family YP_001773660.1 PFAM: glycosyl transferase family 2; KEGG: bam:Bamb_5644 glycosyl transferase, family 2 YP_001773661.1 PFAM: LmbE family protein; KEGG: bam:Bamb_5643 hypothetical protein YP_001773662.1 KEGG: bur:Bcep18194_C7014 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001773663.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bmu:Bmul_5451 NAD-dependent epimerase/dehydratase YP_001773664.1 PFAM: glycosyl transferase group 1; KEGG: bvi:Bcep1808_5707 glycosyl transferase, group 1 YP_001773665.1 PFAM: transport-associated; KEGG: bam:Bamb_5639 transport-associated YP_001773666.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_5638 short-chain dehydrogenase/reductase SDR YP_001773667.1 KEGG: bmu:Bmul_5455 hypothetical protein YP_001773668.1 KEGG: bmu:Bmul_5456 hypothetical protein YP_001773669.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bmu:Bmul_5457 short-chain dehydrogenase/reductase SDR YP_001773670.1 KEGG: bam:Bamb_5634 hypothetical protein YP_001773671.1 KEGG: bvi:Bcep1808_5714 hypothetical protein YP_001773672.1 KEGG: bvi:Bcep1808_5716 natural resistance-associated macrophage protein YP_001773673.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: bam:Bamb_5631 phage SPO1 DNA polymerase-related protein YP_001773674.1 PFAM: response regulator receiver; KEGG: bam:Bamb_5630 response regulator receiver protein YP_001773675.1 PFAM: PRC-barrel domain protein; KEGG: bam:Bamb_5622 PRC-barrel domain protein YP_001773676.1 PFAM: CBS domain containing protein; KEGG: bvi:Bcep1808_5724 CBS domain containing protein YP_001773677.1 KEGG: bam:Bamb_5620 hypothetical protein YP_001773678.1 KEGG: bam:Bamb_5619 hypothetical protein YP_001773679.1 KEGG: bmu:Bmul_5468 hypothetical protein YP_001773680.1 KEGG: bam:Bamb_5618 hypothetical protein YP_001773681.1 KEGG: bam:Bamb_5617 hypothetical protein YP_001773682.1 PFAM: protein of unknown function DUF892; KEGG: bmu:Bmul_5471 protein of unknown function DUF892 YP_001773683.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen YP_001773684.1 KEGG: bvi:Bcep1808_5730 hypothetical protein YP_001773685.1 PFAM: protein of unknown function DUF1328; KEGG: bam:Bamb_5614 protein of unknown function DUF1328 YP_001773686.1 KEGG: bur:Bcep18194_C7022 hypothetical protein YP_001773687.1 Catalase HPII; monofunctional catalase that decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide YP_001773688.1 TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: bam:Bamb_5611 Ku domain protein YP_001773689.1 TIGRFAM: DNA ligase D; DNA ligase D, 3'-phosphoesterase domain protein; DNA polymerase LigD, polymerase domain protein; DNA polymerase LigD, ligase domain protein; PFAM: DNA primase small subunit; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: bam:Bamb_5610 ATP dependent DNA ligase YP_001773690.1 PFAM: sodium/hydrogen exchanger; KEGG: bam:Bamb_5609 sodium/hydrogen exchanger YP_001773691.1 KEGG: bvi:Bcep1808_5737 hypothetical protein YP_001773692.1 KEGG: bam:Bamb_5607 hypothetical protein YP_001773693.1 KEGG: bvi:Bcep1808_5738 hypothetical protein YP_001773694.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: bam:Bamb_5605 intracellular protease, PfpI family YP_001773695.1 KEGG: bur:Bcep18194_C7025 hypothetical protein YP_001773696.1 KEGG: bur:Bcep18194_C7026 hypothetical protein YP_001773697.1 PFAM: phosphatidylserine decarboxylase-related; KEGG: bam:Bamb_5602 phosphatidylserine decarboxylase-related YP_001773698.1 KEGG: bur:Bcep18194_C7028 maltooligosyl trehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_001773699.1 KEGG: bur:Bcep18194_C7029 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77 YP_001773700.1 KEGG: bur:Bcep18194_C7030 glycoside hydrolase, family 13; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_001773701.1 KEGG: bvi:Bcep1808_5811 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_001773702.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain YP_001773703.1 KEGG: bam:Bamb_5591 trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_001773704.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: bur:Bcep18194_C7034 alpha amylase like protein YP_001773705.1 KEGG: bam:Bamb_5589 hypothetical protein YP_001773706.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bvi:Bcep1808_5816 endonuclease/exonuclease/phosphatase YP_001773707.1 PFAM: phospholipase D/Transphosphatidylase; SNARE associated Golgi protein; KEGG: bam:Bamb_5587 phospholipase D/transphosphatidylase YP_001773708.1 KEGG: bmu:Bmul_5495 hypothetical protein YP_001773709.1 PFAM: MgtC/SapB transporter; KEGG: bam:Bamb_5585 MgtC/SapB transporter YP_001773710.1 KEGG: bmu:Bmul_5497 hypothetical protein YP_001773711.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase YP_001773712.1 KEGG: psb:Psyr_0167 hypothetical protein YP_001773713.1 KEGG: psb:Psyr_0166 hypothetical protein YP_001773714.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bmu:Bmul_5949 Rieske (2Fe-2S) domain protein YP_001773715.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bmu:Bmul_5949 Rieske (2Fe-2S) domain protein YP_001773716.1 KEGG: bmu:Bmul_5945 methyltransferase type 12 YP_001773717.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bmu:Bmul_5944 methyltransferase type 12 YP_001773718.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bur:Bcep18194_C7037 HAD-superfamily hydrolase subfamily IA, variant 3 YP_001773719.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_C7038 sugar efflux transporter YP_001773720.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_C7039 short-chain dehydrogenase/reductase SDR YP_001773721.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_C7040 transcriptional regulator, LysR family YP_001773722.1 KEGG: neu:NE2434 putative transmembrane sensor YP_001773723.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: atc:AGR_C_3460 hypothetical transcriptional regulator in MDL-COF intergenic region YP_001773724.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: bxe:Bxe_C1049 TonB-dependent siderophore receptor YP_001773725.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: bxe:Bxe_C1054 TonB protein YP_001773726.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bxe:Bxe_C1053 MotA/TolQ/ExbB proton channel YP_001773727.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rme:Rmet_2279 biopolymer transport protein ExbD/TolR YP_001773728.1 PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: bte:BTH_I3009 ABC transporter, ATP-binding protein YP_001773729.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: pha:PSHAa0113 thioredoxin YP_001773730.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: bmu:Bmul_2222 peptidase U62 modulator of DNA gyrase YP_001773731.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: aav:Aave_0850 peptidase U62, modulator of DNA gyrase YP_001773732.1 KEGG: bxe:Bxe_B2568 hypothetical protein YP_001773733.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: eca:ECA1274 RNA polymerase sigma factor YP_001773734.1 PFAM: helix-turn-helix Fis-type; KEGG: bam:Bamb_5581 helix-turn-helix, fis-type YP_001773735.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bam:Bamb_5580 alcohol dehydrogenase, zinc-binding domain protein YP_001773736.1 PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_5579 benzaldehyde dehydrogenase (NAD(+)) YP_001773737.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH1123 hypothetical protein YP_001773738.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: reu:Reut_B3478 phenazine biosynthesis PhzC/PhzF protein YP_001773739.1 PFAM: transcriptional regulator domain protein; KEGG: bxe:Bxe_B2380 transcriptional regulator, winged helix family YP_001773740.1 PFAM: transposase mutator type; KEGG: bvi:Bcep1808_0454 transposase, mutator type YP_001773741.1 PFAM: tRNA synthetase class II (G H P and S); KEGG: psb:Psyr_2351 tRNA synthetase, class-II (G, H, P and S) YP_001773742.1 KEGG: aeh:Mlg_2364 hypothetical protein YP_001773743.1 PFAM: major facilitator superfamily MFS_1; KEGG: vvu:VV2_0680 permease of the major facilitator superfamily YP_001773744.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: cbe:Cbei_2372 carboxymuconolactone decarboxylase YP_001773745.1 KEGG: bam:Bamb_6587 muconate and chloromuconate cycloisomerases YP_001773746.1 TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: bur:Bcep18194_C7045 catechol 1,2-dioxygenase YP_001773747.1 PFAM: Rieske [2Fe-2S] domain protein; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: bur:Bcep18194_C7046 ring hydroxylating dioxygenase, alpha subunit YP_001773748.1 KEGG: bam:Bamb_6583 2-chlorobenzoate 1,2-dioxygenase; TIGRFAM: benzoate 1,2-dioxygenase, small subunit; PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit YP_001773749.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bur:Bcep18194_C7048 benzoate 1,2-dioxygenase ferredoxin reductase subunit YP_001773750.1 catalyzes the degradation of 2-hydro-1,2-dihydroxy benzoate to catechol YP_001773751.1 PFAM: Endoribonuclease L-PSP; KEGG: bam:Bamb_6580 endoribonuclease L-PSP YP_001773752.1 PFAM: Tannase and feruloyl esterase; KEGG: aor:AO090023000615 predicted protein Pfam: Tannase YP_001773753.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rso:RSc3209 short chain dehydrogenase YP_001773754.1 PFAM: acriflavin resistance protein; KEGG: bam:Bamb_6579 acriflavin resistance protein YP_001773755.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bam:Bamb_6578 efflux transporter, RND family, MFP subunit YP_001773756.1 PFAM: regulatory protein TetR; KEGG: bam:Bamb_6577 transcriptional regulator, TetR family YP_001773757.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bam:Bamb_6576 RND efflux system, outer membrane lipoprotein, NodT family YP_001773759.1 PFAM: cytochrome c class I; KEGG: bam:Bamb_6575 cytochrome c, class I YP_001773760.1 KEGG: bam:Bamb_6573 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_001773761.1 TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; KEGG: bam:Bamb_6572 cytochrome c, monohaem YP_001773762.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bam:Bamb_6569 thiamine pyrophosphate enzyme TPP binding domain protein YP_001773763.1 PFAM: protein of unknown function DUF305; KEGG: bmu:Bmul_5510 protein of unknown function DUF305 YP_001773764.1 PFAM: FRG domain protein; KEGG: bam:Bamb_6563 hypothetical protein YP_001773765.1 PFAM: protein of unknown function DUF1452; KEGG: bur:Bcep18194_C6797 protein of unknown function DUF1452 YP_001773766.1 PFAM: transport-associated; KEGG: bam:Bamb_6562 transport-associated YP_001773767.1 KEGG: bur:Bcep18194_C7053 hypothetical protein YP_001773768.1 PFAM: NUDIX hydrolase; KEGG: bmu:Bmul_5518 NUDIX hydrolase YP_001773769.1 PFAM: secretion protein HlyD family protein; KEGG: bam:Bamb_6560 secretion protein HlyD family protein YP_001773770.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_6559 drug resistance transporter, EmrB/QacA subfamily YP_001773771.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bam:Bamb_6558 RND efflux system, outer membrane lipoprotein, NodT family YP_001773772.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_C7054 two component transcriptional regulator, winged helix family YP_001773773.1 KEGG: bur:Bcep18194_C7055 hypothetical protein YP_001773774.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bvi:Bcep1808_5875 GCN5-related N-acetyltransferase YP_001773775.1 KEGG: bur:Bcep18194_C7059 hypothetical protein YP_001773776.1 PFAM: phosphocarrier HPr protein; KEGG: bur:Bcep18194_C7060 HPrNtr YP_001773777.1 TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: bur:Bcep18194_C7062 PhnA protein YP_001773778.1 KEGG: bur:Bcep18194_C7063 spermidine synthase-like protein YP_001773779.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: bur:Bcep18194_C7064 helix-turn-helix protein, CopG family YP_001773780.1 PFAM: protein of unknown function DUF1275; KEGG: bur:Bcep18194_C7065 protein of unknown function DUF1275 YP_001773781.1 KEGG: bur:Bcep18194_C7066 hypothetical protein YP_001773782.1 KEGG: bur:Bcep18194_C7067 hypothetical protein YP_001773783.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: fal:FRAAL4449 putative dipeptide/oligopeptide transport protein (ABC superfamily, atp_bind) YP_001773784.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mms:mma_0259 ABC-type transport systems, permease component YP_001773785.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fal:FRAAL0338 ABC transporter oligopeptide permease YP_001773786.1 PFAM: extracellular solute-binding protein family 5; KEGG: fra:Francci3_2767 extracellular solute-binding protein, family 5 YP_001773787.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sar:SAR2491 acetyltransferase (GNAT) family protein YP_001773788.1 PFAM: luciferase family protein; KEGG: spe:Spro_2562 luciferase family protein YP_001773789.1 KEGG: nfa:nfa5010 putative monooxygenase YP_001773790.1 PFAM: extracellular solute-binding protein family 3; KEGG: atc:AGR_C_4294 arginine/ornithine-binding protein aotJ YP_001773791.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_4293 histidine transport system permease protein YP_001773792.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_5023 amino acid ABC transporter, permease protein YP_001773793.1 KEGG: pfo:Pfl_2800 hypothetical protein YP_001773794.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL90246 putative ATP-binding component of ABC transporter protein YP_001773795.1 PFAM: inner-membrane translocator; KEGG: bbt:BBta_2578 putative ABC transporter, permease protein YP_001773796.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bbt:BBta_2579 putative ABC transporter, substrate binding protein YP_001773797.1 PFAM: OsmC family protein; KEGG: bur:Bcep18194_C7506 hypothetical protein YP_001773798.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_C7080 transcriptional regulator, AraC family YP_001773799.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_C7081 oxidoreductase YP_001773800.1 PFAM: MgtC/SapB transporter; KEGG: bam:Bamb_6538 MgtC/SapB transporter YP_001773801.1 PFAM: CBS domain containing protein; KEGG: bmu:Bmul_5536 CBS domain containing protein YP_001773802.1 KEGG: bvi:Bcep1808_5889 hypothetical protein YP_001773804.1 KEGG: bvi:Bcep1808_5891 hypothetical protein YP_001773805.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bvi:Bcep1808_5892 short-chain dehydrogenase/reductase SDR YP_001773806.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bam:Bamb_6536 taurine dioxygenase YP_001773807.1 KEGG: bam:Bamb_6535 ABC transporter substrate binding protein YP_001773808.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_6534 ABC transporter related YP_001773809.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_6533 binding-protein-dependent transport systems inner membrane component YP_001773810.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_C7082 acyl-CoA dehydrogenase-like YP_001773811.1 PFAM: luciferase family protein; KEGG: bur:Bcep18194_C7083 flavin-dependent oxidoreductase YP_001773812.1 PFAM: cytochrome c class I; KEGG: bxe:Bxe_C0152 putative sulfite oxidase cytochrome subunit YP_001773813.1 PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: bxe:Bxe_A2166 putative sulfite oxidase, dehydrogenase subunit(SoxC) YP_001773814.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_C7084 outer membrane protein (porin) YP_001773815.1 KEGG: bur:Bcep18194_C7085 hypothetical protein YP_001773816.1 KEGG: bur:Bcep18194_C7086 ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein YP_001773817.1 KEGG: mag:amb0666 hypothetical protein YP_001773818.1 PFAM: peptidase M4 thermolysin; Propeptide peptidase M4 and M36; Peptidase M4 thermolysin; KEGG: bam:Bamb_3836 propeptide, peptidase M4 and M36 YP_001773819.1 PFAM: Integrase catalytic region; KEGG: bam:Bamb_6516 integrase, catalytic region YP_001773820.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pol:Bpro_0695 transcriptional regulator, GntR family YP_001773821.1 TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mms:mma_0031 hypothetical protein YP_001773822.1 PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_0694 ABC transporter related YP_001773823.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0693 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine YP_001773824.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0692 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine YP_001773825.1 PFAM: extracellular solute-binding protein family 3; KEGG: pol:Bpro_0691 extracellular solute-binding protein, family 3 YP_001773826.1 KEGG: pol:Bpro_0690 hypothetical protein YP_001773827.1 PFAM: HI0933 family protein; BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pol:Bpro_0689 BFD-like (2Fe-2S)-binding region YP_001773828.1 PFAM: FAD dependent oxidoreductase; KEGG: pol:Bpro_0688 FAD dependent oxidoreductase YP_001773829.1 PFAM: dihydrodipicolinate synthetase; KEGG: pol:Bpro_0687 dihydrodipicolinate synthetase YP_001773830.1 TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: pol:Bpro_0686 D-hydantoinase YP_001773831.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: gbe:GbCGDNIH1_1830 putative regulatory protein FmdB YP_001773832.1 KEGG: rle:pRL100453 putative transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region YP_001773833.1 KEGG: bam:Bamb_6401 hypothetical protein YP_001773834.1 PFAM: porin Gram-negative type; KEGG: bxe:Bxe_A2630 outer membrane porin, OmpC family YP_001773835.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2523 major facilitator superfamily (MFS) aromatic acid/H+ symporter YP_001773836.1 PFAM: FAD dependent oxidoreductase; KEGG: bja:bll2633 hypothetical protein YP_001773837.1 PFAM: protein of unknown function DUF126; KEGG: mba:Mbar_A0718 hypothetical protein YP_001773838.1 PFAM: protein of unknown function DUF521; KEGG: bpe:BP2824 hypothetical protein YP_001773839.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: reu:Reut_D6479 taurine catabolism dioxygenase TauD/TfdA YP_001773840.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2523 major facilitator superfamily (MFS) aromatic acid/H+ symporter YP_001773841.1 PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: reu:Reut_C5894 dihydroxy-acid dehydratase YP_001773842.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0642 transcriptional regulator, LysR family YP_001773843.1 PFAM: helix-turn-helix HxlR type; KEGG: sil:SPO1190 transcriptional regulator family protein YP_001773844.1 PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; KEGG: pna:Pnap_0622 NmrA family protein YP_001773845.1 PFAM: amidohydrolase 2; KEGG: bam:Bamb_3402 amidohydrolase 2 YP_001773846.1 TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; KEGG: bam:Bamb_3401 L-rhamnose 1-epimerase YP_001773847.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_3400 short-chain dehydrogenase/reductase SDR YP_001773848.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bam:Bamb_3399 mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein YP_001773849.1 PFAM: dihydrodipicolinate synthetase; KEGG: bam:Bamb_3398 dihydrodipicolinate synthetase YP_001773850.1 KEGG: bam:Bamb_3397 rhamnosyltransferase YP_001773851.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bam:Bamb_3396 transcriptional regulator, GntR family YP_001773852.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: bam:Bamb_3395 Asp/Glu racemase YP_001773853.1 PFAM: FAD dependent oxidoreductase; KEGG: bam:Bamb_3394 FAD dependent oxidoreductase YP_001773854.1 PFAM: Endoribonuclease L-PSP; KEGG: bam:Bamb_3393 endoribonuclease L-PSP YP_001773855.1 PFAM: Extracellular ligand-binding receptor; KEGG: bam:Bamb_3392 extracellular ligand-binding receptor YP_001773856.1 PFAM: inner-membrane translocator; KEGG: bam:Bamb_3391 inner-membrane translocator YP_001773857.1 PFAM: inner-membrane translocator; KEGG: bam:Bamb_3390 inner-membrane translocator YP_001773858.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_3389 ABC transporter related YP_001773859.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_3388 ABC transporter related YP_001773860.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_3387 major facilitator superfamily MFS_1 YP_001773861.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: bam:Bamb_3386 glucose-1-phosphate thymidylyltransferase YP_001773862.1 KEGG: bam:Bamb_3385 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_001773863.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bam:Bamb_3384 dTDP-4-dehydrorhamnose reductase YP_001773864.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bam:Bamb_3383 dTDP-glucose 4,6-dehydratase YP_001773866.1 PFAM: heat shock protein Hsp20; KEGG: bpd:BURPS668_3389 heat shock protein, HSP20 family YP_001773867.1 PFAM: heat shock protein Hsp20; KEGG: bpm:BURPS1710b_3427 heat shock protein, HSP20 family YP_001773868.1 KEGG: bmu:Bmul_2382 hypothetical protein YP_001773869.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: bam:Bamb_4411 transketolase, central region YP_001773870.1 PFAM: Transketolase domain protein; KEGG: bam:Bamb_4412 transketolase domain protein YP_001773871.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_4413 major facilitator superfamily MFS_1 YP_001773872.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_4414 short-chain dehydrogenase/reductase SDR YP_001773873.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4415 transcriptional regulator, LysR family YP_001773874.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5626 transcriptional regulator, LysR family YP_001773875.1 PFAM: sodium:dicarboxylate symporter; KEGG: bam:Bamb_5625 sodium:dicarboxylate symporter YP_001773876.1 PFAM: extracellular solute-binding protein family 1; KEGG: bam:Bamb_5624 extracellular solute-binding protein, family 1 YP_001773877.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bmu:Bmul_4980 metabolite/H+ symporter, major facilitator superfamily (MFS) YP_001773878.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bam:Bamb_6345 diguanylate cyclase YP_001773879.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_6341 transcriptional regulator, LysR family YP_001773880.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; TrkA-N domain protein; NmrA family protein; KEGG: bam:Bamb_6340 NmrA family protein YP_001773881.1 KEGG: bam:Bamb_6364 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001773882.1 PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_6363 betaine-aldehyde dehydrogenase YP_001773883.1 PFAM: FAD dependent oxidoreductase; KEGG: bam:Bamb_6361 FAD dependent oxidoreductase YP_001773884.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: bam:Bamb_6360 protein of unknown function DUF861, cupin_3 YP_001773885.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_6359 transcriptional regulator, AraC family YP_001773886.1 PFAM: FAD dependent oxidoreductase; KEGG: bam:Bamb_6358 FAD dependent oxidoreductase YP_001773887.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bam:Bamb_6357 ABC transporter related YP_001773888.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_6356 binding-protein-dependent transport systems inner membrane component YP_001773889.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_6355 binding-protein-dependent transport systems inner membrane component YP_001773890.1 PFAM: extracellular solute-binding protein family 5; KEGG: bam:Bamb_6354 extracellular solute-binding protein, family 5 YP_001773891.1 PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: bam:Bamb_6352 methyl-accepting chemotaxis sensory transducer YP_001773892.1 TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bam:Bamb_6351 haloacid dehalogenase, type II YP_001773893.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_6350 GCN5-related N-acetyltransferase YP_001773894.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bam:Bamb_6349 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_001773895.1 PFAM: aminotransferase class-III; KEGG: bam:Bamb_6348 aminotransferase class-III YP_001773896.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bam:Bamb_6347 transcriptional regulator, AsnC family YP_001773897.1 PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_6346 succinate-semialdehyde dehydrogenase (NAD(P)(+)) YP_001773898.1 PFAM: regulatory protein TetR; KEGG: bja:blr8185 transcriptional regulatory protein YP_001773899.1 PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl_2726 major facilitator superfamily MFS_1 YP_001773900.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: bvi:Bcep1808_6279 ethyl tert-butyl ether degradation EthD YP_001773902.1 PFAM: regulatory protein LuxR; Bacterio-opsin activator HTH domain protein; KEGG: pmy:Pmen_0229 putative metal dependent phosphohydrolase YP_001773903.1 PFAM: regulatory protein TetR; KEGG: reu:Reut_B4446 regulatory protein, TetR YP_001773904.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: reu:Reut_B4445 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001773905.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ret:RHE_PC00054 probable methyltransferase protein YP_001773906.1 KEGG: bam:Bamb_5425 hypothetical protein YP_001773907.1 PFAM: major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_5604 major facilitator superfamily MFS_1 YP_001773908.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bvi:Bcep1808_5603 regulatory protein, LacI YP_001773909.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate YP_001773910.1 KEGG: bvi:Bcep1808_5601 hypothetical protein YP_001773911.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_5608 transcriptional regulator, LysR family YP_001773912.1 catalyzes the oxidation of tricarballylate to cis-aconitate; FAD-dependent; required for the utilization of tricarballylate as a carbon and energy source by S. enterica YP_001773913.1 TIGRFAM: CitB domain protein; KEGG: bvi:Bcep1808_5606 CitB domain protein YP_001773914.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_5605 metabolite/H+ symporter, major facilitator superfamily (MFS) YP_001773915.1 PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: bur:Bcep18194_C6641 methyl-accepting chemotaxis sensory transducer YP_001773916.1 PFAM: chemotaxis sensory transducer; KEGG: bvi:Bcep1808_6433 methyl-accepting chemotaxis sensory transducer YP_001773917.1 TIGRFAM: autotransporter-associated beta strand repeat protein; PFAM: phosphoesterase PA-phosphatase related; KEGG: bam:Bamb_6344 autotransporter-associated beta strand repeat protein YP_001773918.1 KEGG: bam:Bamb_1220 hypothetical protein YP_001773919.1 PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: bam:Bamb_1221 altronate dehydratase YP_001773920.1 PFAM: Mannitol dehydrogenase domain; KEGG: bam:Bamb_1222 mannitol dehydrogenase, C-terminal domain YP_001773921.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bam:Bamb_1223 alcohol dehydrogenase GroES domain protein YP_001773922.1 PFAM: amidohydrolase 2; KEGG: bam:Bamb_1224 amidohydrolase 2 YP_001773923.1 PFAM: aldo/keto reductase; KEGG: bam:Bamb_1225 aldo/keto reductase YP_001773924.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bam:Bamb_1226 periplasmic binding protein/LacI transcriptional regulator YP_001773925.1 PFAM: inner-membrane translocator; KEGG: bam:Bamb_1227 inner-membrane translocator YP_001773926.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_1228 ABC transporter related YP_001773927.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bam:Bamb_1229 GntR domain protein YP_001773928.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bam:Bamb_4928 TonB-dependent siderophore receptor YP_001773929.1 PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: bvi:Bcep1808_6442 arsenical pump membrane protein YP_001773930.1 PFAM: major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_6443 major facilitator superfamily MFS_1 YP_001773931.1 KEGG: bvi:Bcep1808_6444 hypothetical protein YP_001773932.1 KEGG: xcv:XCV0233 putative secreted protein YP_001773933.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bvi:Bcep1808_6445 two component, sigma54 specific, transcriptional regulator, fis family YP_001773934.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bvi:Bcep1808_6446 integral membrane sensor signal transduction histidine kinase YP_001773935.1 PFAM: inner-membrane translocator; KEGG: bam:Bamb_6336 inner-membrane translocator YP_001773936.1 with XylFH is part of the high affinity xylose ABC transporter YP_001773937.1 KEGG: bam:Bamb_6334 D-xylose ABC transporter, periplasmic substrate-binding protein; TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator YP_001773938.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: bam:Bamb_6333 xylulokinase YP_001773939.1 catalyzes the interconversion of D-xylose to D-xylulose YP_001773940.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bvi:Bcep1808_6452 helix-turn-helix-domain containing protein, AraC type YP_001773941.1 PFAM: Aldose 1-epimerase; KEGG: bvi:Bcep1808_6453 aldose 1-epimerase YP_001773942.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_C0104 transcriptional regulator, AraC family YP_001773943.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: bxe:Bxe_B1537 alkylhydroperoxidase AhpD core YP_001773944.1 KEGG: bxe:Bxe_B1538 putative acyl-CoA dehydrogenase YP_001773945.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_3183 ABC transporter, ATP-binding protein YP_001773946.1 KEGG: bxe:Bxe_C0100 ABC nitrate/nitrite/cyanate family transporter, periplasmic ligand binding protein YP_001773947.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_C0099 ABC nitrate/nitrite/cyanate family transporter, inner membrane subunit YP_001773948.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bvi:Bcep1808_5390 acyl-CoA dehydrogenase, type 2, C-terminal domain YP_001773949.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: bvi:Bcep1808_5391 acyl-CoA dehydrogenase, type 2, C-terminal domain YP_001773950.1 KEGG: bvi:Bcep1808_5392 flavin-dependent oxidoreductase-like protein YP_001773951.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_5393 major facilitator superfamily MFS_1 YP_001773952.1 KEGG: bur:Bcep18194_C7503 ABC transporter, periplasmic ligand binding protein, aliphatic sulphonates; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3 YP_001773953.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_C7504 ABC transporter, inner membrane subunit YP_001773954.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_C7505 ABC transporter, ATPase subunit YP_001773955.1 PFAM: alpha/beta hydrolase fold; KEGG: bmu:Bmul_6109 alpha/beta hydrolase fold YP_001773956.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bmu:Bmul_6110 transcriptional regulator, MerR family YP_001773957.1 KEGG: bur:Bcep18194_C7166 adenylate kinase and related kinase YP_001773958.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_C7168 glyoxalase/bleomycin resistance protein/dioxygenase YP_001773959.1 PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bam:Bamb_6369 YadA C-terminal domain protein YP_001773960.1 PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bur:Bcep18194_C7173 two component transcriptional regulator, AraC family YP_001773961.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bur:Bcep18194_C7174 TonB-dependent siderophore receptor YP_001773962.1 PFAM: protein of unknown function DUF72; KEGG: bam:Bamb_6343 protein of unknown function DUF72 YP_001773963.1 KEGG: bmu:Bmul_4212 hypothetical protein YP_001773964.1 KEGG: bmu:Bmul_2536 hypothetical protein YP_001773965.1 TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: transferase hexapeptide repeat containing protein; Autotransporter beta- domain protein; KEGG: bmu:Bmul_4115 outer membrane autotransporter barrel domain protein YP_001773966.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bmu:Bmul_4114 (2Fe-2S)-binding domain protein YP_001773967.1 KEGG: bmu:Bmul_4113 aerobic-type carbon monoxide dehydrogenase large subunit YP_001773968.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_C7176 transcriptional regulator, AraC family YP_001773969.1 PFAM: dienelactone hydrolase; protein of unknown function DUF1486; KEGG: bur:Bcep18194_C7177 carboxymethylenebutenolidase YP_001773970.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_C7178 short chain dehydrogenase YP_001773971.1 KEGG: bur:Bcep18194_C7179 hypothetical protein YP_001773972.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bur:Bcep18194_C7180 flavin reductase-like, FMN-binding YP_001773973.1 KEGG: bur:Bcep18194_C7181 protein involved in MetA-pathway of phenol degradation-like YP_001773974.1 PFAM: type II secretion system protein; KEGG: bur:Bcep18194_C7193 putative Flp pilus assembly protein TadC YP_001773975.1 PFAM: type II secretion system protein; KEGG: bur:Bcep18194_C7194 Flp pilus assembly protein TadB YP_001773976.1 PFAM: type II secretion system protein E; KEGG: bur:Bcep18194_C7195 Flp pilus assembly protein ATPase CpaF YP_001773977.1 KEGG: bur:Bcep18194_C7196 response regulator receiver domain protein (CheY-like) YP_001773978.1 PFAM: TadE family protein; KEGG: bur:Bcep18194_C7197 TadE-like protein YP_001773979.1 PFAM: TadE family protein; KEGG: bur:Bcep18194_C7198 TadE-like protein YP_001773980.1 KEGG: bur:Bcep18194_C7199 hypothetical protein YP_001773981.1 KEGG: bam:Bamb_6293 hypothetical protein YP_001773982.1 PFAM: type II and III secretion system protein; transport-associated; KEGG: bur:Bcep18194_C7201 Flp pilus assembly protein secretin CpaC YP_001773983.1 TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: bur:Bcep18194_C7202 Flp pilus assembly CpaB YP_001773984.1 KEGG: bur:Bcep18194_C7203 ATPase YP_001773985.1 PFAM: peptidase A24A prepilin type IV; KEGG: bur:Bcep18194_C7204 peptidase A24A, prepilin type IV YP_001773986.1 PFAM: Flp/Fap pilin component; KEGG: bur:Bcep18194_C7205 Flp/Fap pilin component YP_001773987.1 PFAM: Flp/Fap pilin component; KEGG: bur:Bcep18194_C7206 Flp/Fap pilin component YP_001773988.1 PFAM: Flp/Fap pilin component; KEGG: bur:Bcep18194_C7207 Flp/Fap pilin component YP_001773989.1 KEGG: bur:Bcep18194_C7208 hypothetical protein YP_001773990.1 KEGG: bur:Bcep18194_C7209 hypothetical protein YP_001773991.1 PFAM: glycosyl transferase family 2; KEGG: bur:Bcep18194_C7210 glycosyl transferase, family 2 YP_001773992.1 PFAM: GtrA family protein; KEGG: bur:Bcep18194_C7211 hypothetical protein YP_001773993.1 KEGG: bur:Bcep18194_C7212 hypothetical protein YP_001773994.1 KEGG: bur:Bcep18194_C7213 hypothetical protein YP_001773995.1 PFAM: extracellular solute-binding protein family 3; KEGG: bvi:Bcep1808_4982 extracellular solute-binding protein, family 3 YP_001773996.1 KEGG: plu:plu3801 hypothetical protein YP_001773997.1 PFAM: major facilitator superfamily MFS_1; KEGG: bmu:Bmul_4907 major facilitator superfamily MFS_1 YP_001773998.1 PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; KEGG: fal:FRAAL4655 hypothetical protein; putative glutathione synthetase ATP-binding domain YP_001773999.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_C7214 transcriptional regulator, LysR family YP_001774000.1 KEGG: bur:Bcep18194_C7215 hypothetical protein YP_001774001.1 PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; KEGG: mlo:mll9226 argininosuccinate lyase YP_001774002.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4820 major facilitator superfamily (MFS_1) transporter YP_001774003.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4819 transcriptional regulator, LysR family YP_001774004.1 PFAM: NIPSNAP family containing protein; KEGG: bur:Bcep18194_B2743 hypothetical protein YP_001774005.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pst:PSPTO_2617 transcriptional regulator, LysR family YP_001774006.1 KEGG: bur:Bcep18194_B1150 hypothetical protein YP_001774007.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bam:Bamb_4064 cold-shock DNA-binding domain protein YP_001774008.1 PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_6110 alpha/beta hydrolase fold YP_001774009.1 PFAM: regulatory protein TetR; KEGG: bam:Bamb_6109 transcriptional regulator, TetR family YP_001774010.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_6527 transcriptional regulator, LysR family YP_001774011.1 KEGG: bam:Bamb_6528 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein YP_001774012.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bvi:Bcep1808_4755 glyoxalase/bleomycin resistance protein/dioxygenase YP_001774013.1 PFAM: MaoC domain protein dehydratase; KEGG: bam:Bamb_6530 MaoC domain protein dehydratase YP_001774014.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bam:Bamb_6531 formyl-CoA transferase YP_001774015.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: bam:Bamb_6532 shikimate 5-dehydrogenase YP_001774016.1 PFAM: major facilitator superfamily MFS_1; KEGG: dac:Daci_4433 major facilitator superfamily MFS_1 YP_001774017.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bmu:Bmul_1323 GCN5-related N-acetyltransferase YP_001774019.1 KEGG: bur:Bcep18194_C6867 dipeptidyl aminopeptidase/acylaminoacyl-peptidase YP_001774020.1 KEGG: bur:Bcep18194_B0428 phosphoesterase; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756 YP_001774021.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: ang:An15g05170 hypothetical protein Pfam: PALP YP_001774022.1 PFAM: membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG); KEGG: amr:AM1_C0238 hypothetical protein YP_001774023.1 PFAM: NmrA family protein; KEGG: bam:Bamb_6112 NmrA family protein YP_001774024.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_6111 transcriptional regulator, LysR family YP_001774025.1 PFAM: ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rle:pRL80015 putative AraC-family transcriptional regulator YP_001774026.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rde:RD1_2502 oxidoreductase, putative YP_001774027.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pau:PA14_72890 putative transcriptional regulator YP_001774028.1 PFAM: aminotransferase class-III; KEGG: bpd:BURPS668_A3060 putative glutamate-1-semialdehyde 2,1-aminomutase YP_001774029.1 PFAM: glutamine synthetase catalytic region; KEGG: bpd:BURPS668_A0728 glutamine synthetase, catalytic domain YP_001774030.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_5775 short-chain dehydrogenase/reductase SDR YP_001774031.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5774 transcriptional regulator, LysR family YP_001774032.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_A1130 regulatory protein, LysR:LysR, substrate-binding YP_001774033.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mlo:mlr5278 glucose dehydrogenase YP_001774034.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bat:BAS1712 short chain dehydrogenase YP_001774035.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mlo:mlr5281 hypothetical protein YP_001774036.1 SMART: extracellular solute-binding protein family 3; KEGG: bam:Bamb_5252 extracellular solute-binding protein, family 3 YP_001774037.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_5581 ABC transporter related YP_001774038.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_5580 binding-protein-dependent transport systems inner membrane component YP_001774039.1 TIGRFAM: allophanate hydrolase; PFAM: Amidase; KEGG: bvi:Bcep1808_5579 amidase YP_001774040.1 TIGRFAM: urea amidolyase related protein; urea carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: bvi:Bcep1808_5578 UreA amidolyase related protein YP_001774041.1 KEGG: bvi:Bcep1808_5577 hypothetical protein YP_001774042.1 KEGG: bvi:Bcep1808_5576 hypothetical protein YP_001774043.1 KEGG: bvi:Bcep1808_5575 ABC transport system substrate-binding protein YP_001774044.1 PFAM: metallophosphoesterase; KEGG: azc:AZC_4277 metallophosphoesterase YP_001774045.1 PFAM: tRNA synthetase class II (G H P and S); KEGG: psb:Psyr_2351 tRNA synthetase, class-II (G, H, P and S) YP_001774046.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4371 transcriptional regulator, LysR family YP_001774047.1 KEGG: bmu:Bmul_2467 hypothetical protein YP_001774048.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bam:Bamb_2123 histidine kinase YP_001774049.1 KEGG: bur:Bcep18194_C7221 poly(3-hydroxybutyrate) depolymerase-like YP_001774050.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; MHYT domain protein; KEGG: bur:Bcep18194_C7222 periplasmic sensor signal transduction histidine kinase YP_001774051.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; KEGG: bur:Bcep18194_C7223 response regulator receiver (CheY-like) modulated metal-dependent phosphohydrolase YP_001774052.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_C7224 GCN5-related N-acetyltransferase YP_001774053.1 KEGG: bur:Bcep18194_C7252 hypothetical protein YP_001774054.1 PFAM: sodium:dicarboxylate symporter; KEGG: bur:Bcep18194_C7251 sodium-dicarboxylate symporter YP_001774055.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bur:Bcep18194_C7250 transcriptional regulator, GntR family YP_001774056.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_C7249 GCN5-related N-acetyltransferase YP_001774057.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_C7455 outer membrane protein (porin) YP_001774058.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_6419 transcriptional regulator, LysR family YP_001774059.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2673 major facilitator superfamily (MFS_1) transporter YP_001774060.1 PFAM: Ketopantoate reductase ApbA/PanE domain protein; KEGG: bam:Bamb_6421 2-dehydropantoate 2-reductase YP_001774061.1 PFAM: ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_C7256 ThiJ/PfpI family protein YP_001774062.1 KEGG: bam:Bamb_3404 hypothetical protein YP_001774063.1 KEGG: bam:Bamb_3403 putative lipoprotein YP_001774064.1 KEGG: rso:RS03923 hypothetical protein YP_001774065.1 TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: rso:RSp0555 probable chromate transport transmembrane protein YP_001774066.1 KEGG: rme:Rmet_3866 putative chromate resistance signal peptide protein YP_001774067.1 KEGG: bam:Bamb_5805 hypothetical protein YP_001774068.1 KEGG: bam:Bamb_5800 hypothetical protein YP_001774069.1 KEGG: bam:Bamb_5801 hypothetical protein YP_001774070.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_001774071.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bvi:Bcep1808_4762 integral membrane sensor signal transduction histidine kinase YP_001774072.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bvi:Bcep1808_4761 two component transcriptional regulator, winged helix family YP_001774073.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bvi:Bcep1808_4760 efflux transporter, RND family, MFP subunit YP_001774074.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bvi:Bcep1808_4759 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family YP_001774075.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bvi:Bcep1808_4758 RND efflux system, outer membrane lipoprotein, NodT family YP_001774076.1 SMART: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_C7267 ABC amino acid transporter, periplasmic ligand binding protein YP_001774077.1 PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: bam:Bamb_6253 aminotransferase, class V YP_001774078.1 PFAM: sodium:dicarboxylate symporter; KEGG: bam:Bamb_6252 sodium:dicarboxylate symporter YP_001774079.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_6251 transcriptional regulator, LysR family YP_001774080.1 PFAM: sodium:dicarboxylate symporter; KEGG: bam:Bamb_6250 sodium:dicarboxylate symporter YP_001774081.1 PFAM: extracellular solute-binding protein family 3; KEGG: bam:Bamb_6249 extracellular solute-binding protein, family 3 YP_001774082.1 KEGG: bur:Bcep18194_C7351 excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_001774083.1 KEGG: bam:Bamb_6204 hypothetical protein YP_001774084.1 KEGG: bvi:Bcep1808_3821 hypothetical protein YP_001774085.1 PFAM: OmpA/MotB domain protein; KEGG: bam:Bamb_6202 OmpA/MotB domain protein YP_001774086.1 PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bur:Bcep18194_C7374 YadA/haemagluttinin like protein YP_001774087.1 PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bur:Bcep18194_C7377 two component transcriptional regulator, AraC family YP_001774088.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Diverse 7TM receptor extracellular region 2; KEGG: bur:Bcep18194_C7378 periplasmic sensor signal transduction histidine kinase YP_001774090.1 membrane component of a putative sugar ABC transporter system YP_001774091.1 PFAM: inner-membrane translocator; KEGG: bmu:Bmul_5961 monosaccharide-transporting ATPase YP_001774092.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_6551 ABC transporter related YP_001774093.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bam:Bamb_6193 periplasmic binding protein/LacI transcriptional regulator YP_001774094.1 PFAM: Pirin domain protein; KEGG: bur:Bcep18194_C7379 pirin-like YP_001774095.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: bur:Bcep18194_C7380 (acyl-carrier protein) phosphodiesterase YP_001774096.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_C7382 transcriptional regulator, LysR family YP_001774097.1 KEGG: bam:Bamb_6192 DNA topoisomerase, type I, putative YP_001774098.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_C7406 major facilitator superfamily (MFS_1) transporter YP_001774099.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_C7407 alpha/beta hydrolase YP_001774100.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_C7408 transcriptional regulator, LysR family YP_001774101.1 KEGG: bur:Bcep18194_C7409 hypothetical protein YP_001774102.1 PFAM: fatty acid desaturase; KEGG: bur:Bcep18194_C7410 fatty acid desaturase YP_001774103.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_C7411 AMP-dependent synthetase and ligase YP_001774104.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_C7412 ABC efflux pump, ATPase subunit YP_001774105.1 PFAM: protein of unknown function DUF214; KEGG: bur:Bcep18194_C7413 ABC efflux pump, inner membrane subunit YP_001774106.1 KEGG: bur:Bcep18194_C7414 hypothetical protein YP_001774107.1 KEGG: bam:Bamb_6146 hypothetical protein YP_001774108.1 KEGG: bur:Bcep18194_C7416 hypothetical protein YP_001774109.1 PFAM: phosphopantetheine-binding; KEGG: bur:Bcep18194_C7417 putative acyl carrierprotein YP_001774110.1 KEGG: bur:Bcep18194_C7418 hypothetical protein YP_001774111.1 KEGG: bur:Bcep18194_C7419 hypothetical protein YP_001774112.1 KEGG: bam:Bamb_6141 hypothetical protein YP_001774113.1 KEGG: bur:Bcep18194_C7421 hypothetical protein YP_001774114.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: bur:Bcep18194_C7422 Orn/DAP/Arg decarboxylase 2 YP_001774115.1 TIGRFAM: acyl-CoA ligase (AMP-forming), exosortase system type 1 associated; PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_C7423 AMP-dependent synthetase and ligase YP_001774116.1 KEGG: bur:Bcep18194_C7424 hypothetical protein YP_001774117.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_C7425 acyl-CoA dehydrogenase YP_001774118.1 KEGG: bur:Bcep18194_C7426 citrate synthase-like YP_001774119.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_C7427 UbiE/COQ5 methyltransferase YP_001774120.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bam:Bamb_6133 taurine catabolism dioxygenase TauD/TfdA YP_001774121.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_C7429 ABC efflux pump, ATPase subunit YP_001774122.1 PFAM: ABC-2 type transporter; KEGG: bur:Bcep18194_C7430 ABC efflux pump, inner membrane subunit YP_001774123.1 KEGG: bur:Bcep18194_C7431 hypothetical protein YP_001774124.1 PFAM: FAD linked oxidase domain protein; KEGG: bur:Bcep18194_C7432 FAD linked oxidase-like YP_001774125.1 KEGG: bur:Bcep18194_C7433 hypothetical protein YP_001774126.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bur:Bcep18194_C7434 TRAP dicarboxylate transporter, DctM subunit YP_001774127.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: bur:Bcep18194_C7435 tripartite ATP-independent periplasmic transporter, DctQ component YP_001774128.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: bur:Bcep18194_C7436 TRAP dicarboxylate transporter-DctP subunit YP_001774129.1 KEGG: bmu:Bmul_5983 hypothetical protein YP_001774130.1 SMART: regulatory protein LuxR; KEGG: bur:Bcep18194_C7444 transcriptional regulator, LuxR family YP_001774131.1 KEGG: bur:Bcep18194_C7446 hypothetical protein YP_001774132.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: bam:Bamb_5780 dihydrokaempferol 4-reductase YP_001774133.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: xac:XAC0536 virulence regulating protein YP_001774134.1 PFAM: Endoribonuclease L-PSP; KEGG: bur:Bcep18194_C7448 endoribonuclease L-PSP YP_001774135.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bur:Bcep18194_C7449 histone-like nucleoid-structuring protein H-NS YP_001774136.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_C7450 hypothetical protein YP_001774137.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_C7468 transcriptional regulator, LysR family YP_001774138.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_C7469 lysine exporter family protein (LysE/YggA) YP_001774139.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bur:Bcep18194_C7470 acyl-carrier protein phosphodiesterase YP_001774140.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_C7471 transcriptional regulator, LysR family YP_001774141.1 PFAM: Saccharopine dehydrogenase; KEGG: bur:Bcep18194_C7476 putative saccharopine dehydrogenase YP_001774142.1 KEGG: bur:Bcep18194_C7477 hypothetical protein YP_001774143.1 KEGG: bur:Bcep18194_C7498 hypothetical protein YP_001774144.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bur:Bcep18194_C7507 methyl-accepting chemotaxis sensory transducer YP_001774145.1 KEGG: bur:Bcep18194_C7510 glyoxalase/bleomycin resistance protein/dioxygenase YP_001774146.1 PFAM: beta-lactamase domain protein; KEGG: bur:Bcep18194_C7234 beta-lactamase-like YP_001774147.1 KEGG: bur:Bcep18194_C7233 hypothetical protein YP_001774148.1 KEGG: bur:Bcep18194_C7232 hypothetical protein YP_001774149.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_C7231 transcriptional regulator, LysR family YP_001774150.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B1501 alpha/beta hydrolase YP_001774151.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4062 transcriptional regulator, LysR family YP_001774152.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: bam:Bamb_4063 hypothetical protein YP_001774153.1 PFAM: aldo/keto reductase; KEGG: bam:Bamb_6263 aldo/keto reductase YP_001774154.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: bmu:Bmul_4795 4-oxalocrotonate tautomerase YP_001774155.1 PFAM: regulatory protein TetR; KEGG: bmu:Bmul_5991 transcriptional regulator, TetR family YP_001774156.1 KEGG: bam:Bamb_6104 squalene-hopene cyclase; TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase YP_001774157.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_3405 transcriptional regulator, LysR family YP_001774158.1 PFAM: FAD dependent oxidoreductase; KEGG: bvi:Bcep1808_3404 FAD dependent oxidoreductase YP_001774159.1 KEGG: bvi:Bcep1808_3403 hypothetical protein YP_001774160.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bmu:Bmul_5996 BFD domain protein (2Fe-2S)-binding domain protein YP_001774161.1 PFAM: extracellular solute-binding protein family 3; KEGG: bvi:Bcep1808_3401 extracellular solute-binding protein, family 3 YP_001774162.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A1690 transcriptional regulator, LysR-family YP_001774163.1 KEGG: reh:H16_A1692 hypothetical protein YP_001774164.1 PFAM: aldo/keto reductase; KEGG: reh:H16_A1691 predicted oxidoreductas (related to aryl-alcoholdehydrogenases) YP_001774165.1 KEGG: bxe:Bxe_B2209 hypothetical protein YP_001774166.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bja:blr0996 HlyD family secretion protein YP_001774167.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bja:blr0997 AcrB/AcrD/AcrF family protein YP_001774168.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: dac:Daci_0165 RND efflux system, outer membrane lipoprotein, NodT family YP_001774169.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azo:azo3629 transcriptional regulator, LysR family YP_001774170.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: mxa:MXAN_5469 male sterility protein-like protein YP_001774171.1 PFAM: beta-lactamase; KEGG: bur:Bcep18194_C7532 beta-lactamase YP_001774172.1 KEGG: bur:Bcep18194_C7533 hypothetical protein YP_001774173.1 KEGG: bur:Bcep18194_C7534 hypothetical protein YP_001774174.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: bur:Bcep18194_C7535 hypothetical protein YP_001774175.1 PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_6102 alpha/beta hydrolase fold YP_001774176.1 KEGG: bur:Bcep18194_C7537 hypothetical protein YP_001774177.1 KEGG: bmu:Bmul_6010 hypothetical protein YP_001774178.1 KEGG: bur:Bcep18194_C7544 hypothetical protein YP_001774179.1 PFAM: MlrC domain protein; Microcystin LR degradation protein MlrC-like; KEGG: bam:Bamb_6097 MlrC domain protein YP_001774180.1 KEGG: bvi:Bcep1808_6582 amidase, hydantoinase/carbamoylase family; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001774181.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_6583 ABC transporter related YP_001774182.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_6584 ABC transporter related YP_001774183.1 PFAM: inner-membrane translocator; KEGG: bvi:Bcep1808_6585 inner-membrane translocator YP_001774184.1 PFAM: inner-membrane translocator; KEGG: bvi:Bcep1808_6586 inner-membrane translocator YP_001774185.1 KEGG: bvi:Bcep1808_6587 ABC-type branched-chain amino acid transport system periplasmic component YP_001774186.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bvi:Bcep1808_6588 GntR domain protein YP_001774187.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_C7546 betaine-aldehyde dehydrogenase YP_001774188.1 PFAM: aminotransferase class-III; KEGG: bur:Bcep18194_C7547 hypothetical protein YP_001774189.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_C7548 amino acid transporter YP_001774190.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_C7549 transcriptional regulator, AraC family YP_001774191.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_C7550 ABC glycinebetaine/carnitine/choline transporter, inner membrane subunit YP_001774192.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bur:Bcep18194_C7551 ABC glycine betaine/choline-binding transporter, periplasmic ligand binding protein YP_001774193.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_C7552 ABC glycinebetaine/carnitine/choline transporter, inner membrane subunit YP_001774194.1 KEGG: bur:Bcep18194_C7553 ABC glycine betaine/L-proline transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase YP_001774195.1 KEGG: bur:Bcep18194_C7561 hypothetical protein YP_001774196.1 PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; KEGG: bur:Bcep18194_C7562 transcriptional regulator, MarR family with acetyltransferase activity YP_001774197.1 KEGG: bur:Bcep18194_C7577 Rossmann fold nucleotide-binding protein-like YP_001774198.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_C7578 major facilitator superfamily, (MFS_1) family YP_001774199.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bur:Bcep18194_C7579 histone-like nucleoid-structuring protein H-NS YP_001774200.1 KEGG: bur:Bcep18194_C7580 hypothetical protein YP_001774201.1 KEGG: bur:Bcep18194_C7581 hypothetical protein YP_001774202.1 TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bam:Bamb_5835 transcriptional regulator, histidine utilization repressor, GntR family YP_001774203.1 PFAM: phenylalanine/histidine ammonia-lyase; KEGG: bam:Bamb_5836 phenylalanine/histidine ammonia-lyase YP_001774204.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_5837 ABC transporter related YP_001774205.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_5838 polar amino acid ABC transporter, inner membrane subunit YP_001774206.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_5839 polar amino acid ABC transporter, inner membrane subunit YP_001774207.1 PFAM: extracellular solute-binding protein family 3; KEGG: bam:Bamb_5840 extracellular solute-binding protein, family 3 YP_001774208.1 PFAM: NAD-dependent epimerase/dehydratase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bur:Bcep18194_C7602 dTDP-4-dehydrorhamnose reductase YP_001774210.1 PFAM: DoxX family protein; KEGG: bur:Bcep18194_C7619 DoxX YP_001774211.1 SMART: LamG domain protein jellyroll fold domain protein; KEGG: rso:RS01652 putative transmembrane protein YP_001774212.1 PFAM: formate/nitrite transporter; KEGG: azo:azo1177 putative nitrite transporter YP_001774213.1 PFAM: ANTAR domain protein; Nitrate and nitrite sensing domain protein; KEGG: dac:Daci_2378 response regulator receiver and ANTAR domain protein YP_001774214.1 PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: bur:Bcep18194_C7620 flagellar hook-associated protein 2 YP_001774215.1 KEGG: bte:BTH_II2292 hypothetical protein YP_001774216.1 PFAM: dihydrodipicolinate synthetase; KEGG: bur:Bcep18194_C7621 dihydrodipicolinate synthetase YP_001774217.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_C7622 major facilitator superfamily, (MFS_1) family YP_001774218.1 TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: bur:Bcep18194_C7623 ribokinase YP_001774219.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_C7624 transcriptional regulator, LacI family YP_001774220.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: bur:Bcep18194_C7631 filamentation induced by cAMP protein, Fic YP_001774221.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_C7632 transcriptional regulator, LysR family YP_001774222.1 PFAM: Pirin domain protein; Cupin 2 conserved barrel domain protein; KEGG: bmu:Bmul_6056 pirin domain protein YP_001774223.1 stationary phase protein that binds TrpR repressor YP_001774224.1 KEGG: bur:Bcep18194_C7635 hypothetical protein YP_001774225.1 PFAM: LrgB family protein; KEGG: bur:Bcep18194_C7636 LrgB-like protein YP_001774226.1 PFAM: LrgA family protein; KEGG: bur:Bcep18194_C7637 LrgA YP_001774227.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bur:Bcep18194_C7669 esterase/lipase/thioesterase YP_001774228.1 PFAM: OsmC family protein; KEGG: bur:Bcep18194_C7670 OsmC-like protein YP_001774229.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_C7671 transcriptional regulator, TetR family YP_001774230.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_C7674 ABC efflux pump, ATPase subunit YP_001774231.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_C7685 outer membrane protein (porin) YP_001774232.1 PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_C7686 glutathione S-transferase-like YP_001774233.1 KEGG: rpc:RPC_4294 acyltransferase 3 YP_001774234.1 KEGG: bur:Bcep18194_C7688 hypothetical protein YP_001774235.1 KEGG: bur:Bcep18194_C7689 hypothetical protein YP_001774236.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_6059 transcriptional regulator, LysR family YP_001774237.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bam:Bamb_6058 protein of unknown function DUF6, transmembrane YP_001774238.1 PFAM: Extracellular ligand-binding receptor; KEGG: bam:Bamb_6057 extracellular ligand-binding receptor YP_001774239.1 KEGG: bur:Bcep18194_C7693 hypothetical protein YP_001774240.1 PFAM: FAD linked oxidase domain protein; KEGG: bur:Bcep18194_C7704 FAD linked oxidase YP_001774241.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_C7705 transcriptional regulator, LysR family YP_001774242.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_C7706 transcriptional regulator, LysR family YP_001774243.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bam:Bamb_6036 lysine exporter protein (LysE/YggA) YP_001774244.1 PFAM: luciferase family protein; KEGG: bam:Bamb_6035 luciferase family protein YP_001774245.1 PFAM: NADPH-dependent FMN reductase; KEGG: bur:Bcep18194_C7714 FMN reductase YP_001774246.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bur:Bcep18194_C7716 sigma54 specific transcriptional regulator with PAS sensor, fis family YP_001774247.1 in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone YP_001774248.1 PFAM: protein of unknown function DUF1330; KEGG: bur:Bcep18194_C7348 protein of unknown function DUF1330 YP_001774249.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_6031 general substrate transporter YP_001774250.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bur:Bcep18194_C7710 transcriptional regulator, GntR family with aminotransferase activity YP_001774251.1 PFAM: protein of unknown function DUF81; KEGG: bur:Bcep18194_C7709 protein of unknown function DUF81 YP_001774252.1 PFAM: beta-lactamase domain protein; KEGG: bur:Bcep18194_B2842 beta-lactamase-like YP_001774253.1 PFAM: aminotransferase class-III; KEGG: bam:Bamb_6024 aminotransferase class-III YP_001774254.1 PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_6023 succinate-semialdehyde dehydrogenase (NAD(P)(+)) YP_001774255.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bam:Bamb_6022 transcriptional regulator, AsnC family YP_001774256.1 TIGRFAM: ectoine utilization protein EutE; PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bam:Bamb_6021 succinylglutamate desuccinylase/aspartoacylase YP_001774257.1 TIGRFAM: ectoine utilization protein EutD; PFAM: creatinase; peptidase M24; KEGG: bam:Bamb_6020 peptidase M24 YP_001774258.1 putative cyclodeaminase YP_001774259.1 catalyzes the formation of 2-oxobutanoate from L-threonine; involved in ectoine utilization YP_001774260.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bam:Bamb_6017 transcriptional regulator, GntR family YP_001774261.1 PFAM: HpcH/HpaI aldolase; KEGG: bxe:Bxe_B2581 putative citrate lyase beta subunit YP_001774262.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_B2583 putative CaiB/BaiF family protein YP_001774263.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_B2584 putative acyl-CoA dehydrogenase YP_001774264.1 KEGG: bur:Bcep18194_C7720 hypothetical protein YP_001774265.1 PFAM: regulatory protein MarR; KEGG: bam:Bamb_6016 transcriptional regulator, MarR family YP_001774266.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: bam:Bamb_6015 fusaric acid resistance protein conserved region YP_001774267.1 PFAM: protein of unknown function DUF1656; KEGG: bur:Bcep18194_C7723 protein of unknown function DUF1656 YP_001774268.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bur:Bcep18194_C7724 secretion protein HlyD family YP_001774269.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bam:Bamb_6012 RND efflux system, outer membrane lipoprotein, NodT family YP_001774270.1 PFAM: TOBE domain protein; KEGG: bur:Bcep18194_C7726 molybdenum-pterin binding protein YP_001774271.1 PFAM: NifQ family protein; KEGG: bur:Bcep18194_C7727 hypothetical protein YP_001774272.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_C7729 protein of unknown function DUF6, transmembrane YP_001774273.1 PFAM: ProQ activator of osmoprotectant transporter ProP; KEGG: bur:Bcep18194_C7730 ProQ, activator of osmoprotectant transporter ProP YP_001774274.1 KEGG: bur:Bcep18194_C7732 hypothetical protein YP_001774275.1 PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: bam:Bamb_6006 flavodoxin/nitric oxide synthase YP_001774276.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_C7734 transcriptional regulator, TetR family YP_001774277.1 KEGG: bur:Bcep18194_C7735 Zn-dependent hydrolase of the beta-lactamase fold-like YP_001774278.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: bur:Bcep18194_C7736 transcriptional regulator, AraC family YP_001774279.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bam:Bamb_6002 cobyrinic acid a,c-diamide synthase YP_001774280.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bur:Bcep18194_C7738 ParB-like partition protein YP_001774281.1 KEGG: bur:Bcep18194_C7739 hypothetical protein YP_001774282.1 KEGG: bur:Bcep18194_C6524 hypothetical protein YP_001774283.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_C6525 transcriptional regulator, LysR family YP_001774284.1 PFAM: adenylosuccinate synthetase; KEGG: bur:Bcep18194_C6526 adenylosuccinate synthase YP_001774285.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_C6527 transcriptional regulator, LysR family YP_001774286.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_C6528 ABC transporter, substrate-binding protein, aliphatic sulphonates YP_001774287.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: bur:Bcep18194_C6605 transcriptional regulator, AraC family YP_001774288.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_C6606 transcriptional regulator, LysR family YP_001774289.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bur:Bcep18194_C6607 secretion protein, HlyD family YP_001774290.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bur:Bcep18194_C6608 hydrophobe/amphiphile efflux-1 pump, HAE1 YP_001774291.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bam:Bamb_2654 RND efflux system, outer membrane lipoprotein, NodT family YP_001774292.1 PFAM: dienelactone hydrolase; KEGG: bur:Bcep18194_C6610 carboxymethylenebutenolidase YP_001774293.1 KEGG: bur:Bcep18194_C6611 hypothetical protein YP_001774294.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_C6612 transcriptional regulator, AraC family YP_001774295.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bur:Bcep18194_C6613 metal-dependent phosphohydrolase YP_001774297.1 PFAM: conserved hypothetical protein; KEGG: bam:Bamb_5990 hypothetical protein YP_001774298.1 PFAM: RES domain protein; KEGG: bur:Bcep18194_C6617 hypothetical protein YP_001774299.1 PFAM: integrase family protein; KEGG: bur:Bcep18194_C6618 phage integrase YP_001774300.1 KEGG: bur:Bcep18194_C6619 small integral membrane protein YP_001774301.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: bur:Bcep18194_C6620 xanthine/uracil/vitamin C transporter YP_001774302.1 KEGG: bur:Bcep18194_C6621 hypothetical protein YP_001774303.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_C6622 transcriptional regulator, LysR family YP_001774304.1 PFAM: gamma-glutamyltranspeptidase; KEGG: bur:Bcep18194_C6623 gamma-glutamyltransferase YP_001774305.1 KEGG: bur:Bcep18194_C6625 hypothetical protein YP_001774306.1 PFAM: metallophosphoesterase; KEGG: bur:Bcep18194_C6632 metallophosphoesterase YP_001774307.1 KEGG: bur:Bcep18194_C6633 hypothetical protein YP_001774308.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: bur:Bcep18194_C6634 metal-dependent phosphohydrolase YP_001774309.1 KEGG: bur:Bcep18194_C6635 hypothetical protein YP_001774310.1 KEGG: bur:Bcep18194_C6636 hypothetical protein YP_001774311.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_C6642 GCN5-related N-acetyltransferase YP_001774312.1 KEGG: bur:Bcep18194_C6643 hypothetical protein YP_001774313.1 KEGG: bur:Bcep18194_C6644 hypothetical protein YP_001774314.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_C6649 transcriptional regulator, AraC family YP_001774315.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_C6650 AMP-dependent synthetase and ligase YP_001774316.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_C6651 short-chain dehydrogenase/reductase SDR YP_001774317.1 KEGG: bur:Bcep18194_C6652 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_001774318.1 PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: bur:Bcep18194_C6653 transcriptional regulator, TetR family YP_001774319.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide YP_001774320.1 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain YP_001774321.1 catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines YP_001774322.1 TIGRFAM: NCS1 nucleoside transporter family; PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bur:Bcep18194_C6657 cytosine/purines, uracil, thiamine, allantoin transporter YP_001774323.1 catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position YP_001774324.1 PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: bur:Bcep18194_C6659 Na+ dependent nucleoside transporter YP_001774325.1 Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate YP_001774326.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bur:Bcep18194_C6661 cytidine deaminase, homotetrameric YP_001774327.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bur:Bcep18194_C6662 dioxygenase, iron-sulfur subunit YP_001774328.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress YP_001774329.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; cytochrome c biogenesis protein transmembrane region; Redoxin domain protein; KEGG: bur:Bcep18194_C6664 cytochrome c biogenesis protein, transmembrane region YP_001774330.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: bur:Bcep18194_C6665 methionine sulfoxide reductase B YP_001774331.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4358 transcriptional regulator, LysR family YP_001774332.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mac:MA1321 short chain dehydrogenase YP_001774333.1 PFAM: protein of unknown function DUF336; KEGG: bpd:BURPS668_1963 hypothetical protein YP_001774334.1 KEGG: bpl:BURPS1106A_3421 hypothetical protein YP_001774335.1 PFAM: chaperonin Cpn10; KEGG: bmu:Bmul_5254 chaperonin Cpn10 YP_001774336.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth YP_001774337.1 KEGG: bvi:Bcep1808_5183 hypothetical protein YP_001774338.1 PFAM: manganese containing catalase; KEGG: bvi:Bcep1808_5181 catalase YP_001774339.1 KEGG: bur:Bcep18194_C6575 manganese/iron transporter, NRAMP family YP_001774340.1 KEGG: bmu:Bmul_4582 hypothetical protein YP_001774341.1 PFAM: natural resistance-associated macrophage protein; KEGG: bmu:Bmul_3999 natural resistance-associated macrophage protein YP_001774343.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_C6808 transcriptional regulator, TetR family YP_001774344.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: bur:Bcep18194_B2885 hypothetical protein YP_001774345.1 KEGG: bur:Bcep18194_B2884 hypothetical protein YP_001774346.1 KEGG: bur:Bcep18194_B2883 hypothetical protein YP_001774347.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mmw:Mmwyl1_2682 transcriptional regulator, LysR family YP_001774348.1 PFAM: dihydrodipicolinate synthetase; KEGG: ppf:Pput_5282 dihydrodipicolinate synthetase YP_001774349.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mta:Moth_0632 general substrate transporter YP_001774350.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_C7659 outer membrane protein (porin) YP_001774351.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; KEGG: rso:RSc0510 probable transmembrane protein YP_001774352.1 KEGG: bpd:BURPS668_3223 bacterial sugar transferase family protein; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_001774353.1 PFAM: polysaccharide export protein; KEGG: bam:Bamb_6483 polysaccharide export protein YP_001774354.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bxe:Bxe_C1087 protein tyrosine phosphatase YP_001774355.1 KEGG: rso:RSp1018 EPS I polysaccharide export transmembrane protein; TIGRFAM: exopolysaccharide transport protein family; capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein YP_001774356.1 PFAM: glycosyl transferase group 1; KEGG: bam:Bamb_6492 glycosyl transferase, group 1 YP_001774357.1 KEGG: mes:Meso_2577 hypothetical protein YP_001774358.1 PFAM: polysaccharide biosynthesis protein; KEGG: spe:Spro_1606 polysaccharide biosynthesis protein YP_001774359.1 PFAM: glycosyl transferase family 2; KEGG: gdi:GDI2497 putative glycosyl transferase YP_001774360.1 KEGG: mes:Meso_2576 polysaccharide pyruvyl transferase YP_001774361.1 PFAM: glycosyl transferase group 1; KEGG: ret:RHE_CH03383 probable glycosyltransferase protein YP_001774362.1 PFAM: glycoside hydrolase family 16; KEGG: gdi:GDI1160 putative endo-1,3-1,4-beta-glycanase protein YP_001774363.1 SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: bvi:Bcep1808_5622 histone family protein nucleoid-structuring protein H-NS YP_001774364.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bvi:Bcep1808_5623 regulatory proteins, IclR YP_001774365.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_C6809 two component transcriptional regulator, winged helix family YP_001774366.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_C6810 periplasmic sensor signal transduction histidine kinase YP_001774367.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_C6811 transcriptional regulator, AraC family YP_001774368.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; KEGG: cko:CKO_01537 hypothetical protein YP_001774369.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_C6813 AMP-dependent synthetase and ligase YP_001774370.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_C6814 transcriptional regulator, AraC family YP_001774371.1 KEGG: bxe:Bxe_B1750 hypothetical protein YP_001774372.1 PFAM: oxidoreductase molybdopterin binding; KEGG: rso:RSc0620 hypothetical protein YP_001774373.1 KEGG: bxe:Bxe_A2178 putative transmembrane hydrogenase cytochrome b-type subunit YP_001774374.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bam:Bamb_5773 acyl-CoA dehydrogenase domain protein YP_001774375.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: bvi:Bcep1808_5643 electron-transferring-flavoprotein dehydrogenase YP_001774376.1 catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA YP_001774377.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bmu:Bmul_5366 3-hydroxybutyryl-CoA dehydrogenase YP_001774378.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_C6881 transcriptional regulator, TetR family YP_001774379.1 KEGG: bur:Bcep18194_C6882 NmrA-like YP_001774380.1 KEGG: bur:Bcep18194_C6883 integral membrane protein YP_001774381.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_C6884 transcriptional regulator, AraC family YP_001774382.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_C6885 protein of unknown function DUF6, transmembrane YP_001774383.1 PFAM: protein of unknown function DUF815; KEGG: bur:Bcep18194_C6886 protein of unknown function DUF815 YP_001774384.1 KEGG: har:HEAR3220 hypothetical protein YP_001774385.1 KEGG: bqu:BQ11210 hypothetical protein YP_001774386.1 PFAM: type III secretion FHIPEP protein; KEGG: bpd:BURPS668_A0211 flagellar biosynthesis protein FlhA YP_001774387.1 PFAM: Resolvase domain; KEGG: bxe:Bxe_C1218 putative invertase YP_001774388.1 PFAM: Resolvase domain; KEGG: bxe:Bxe_C1218 putative invertase YP_001774389.1 PFAM: EAL domain protein; KEGG: bmu:Bmul_3471 diguanylate phosphodiesterase YP_001774390.1 PFAM: transposase mutator type; KEGG: bvi:Bcep1808_0454 transposase, mutator type YP_001774391.1 PFAM: OmpA/MotB domain protein; KEGG: bam:Bamb_4576 OmpA/MotB domain protein YP_001774392.1 SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: bpm:BURPS1710b_2204 BphA YP_001774393.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bam:Bamb_1316 two component transcriptional regulator, winged helix family YP_001774394.1 KEGG: bam:Bamb_6352 methyl-accepting chemotaxis sensory transducer YP_001774395.1 KEGG: dac:Daci_3267 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001774396.1 PFAM: small multidrug resistance protein; KEGG: bam:Bamb_4292 small multidrug resistance protein YP_001774397.1 KEGG: bam:Bamb_4291 hypothetical protein YP_001774398.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bam:Bamb_4290 transcriptional regulator, AsnC family YP_001774399.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine YP_001774400.1 PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_4288 aldehyde dehydrogenase YP_001774401.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_4287 ABC transporter related YP_001774402.1 PFAM: extracellular solute-binding protein family 3; KEGG: bam:Bamb_4286 extracellular solute-binding protein, family 3 YP_001774403.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_4285 polar amino acid ABC transporter, inner membrane subunit YP_001774404.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_4284 polar amino acid ABC transporter, inner membrane subunit YP_001774405.1 PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: bam:Bamb_4283 cystathionine gamma-synthase YP_001774406.1 PFAM: homocysteine S-methyltransferase; KEGG: bam:Bamb_4282 homocysteine S-methyltransferase YP_001774407.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bam:Bamb_4281 transcriptional regulator, AsnC family YP_001774408.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4560 transcriptional regulator, LysR family YP_001774409.1 KEGG: bam:Bamb_4561 hypothetical protein YP_001774410.1 PFAM: helix-turn-helix HxlR type; KEGG: azc:AZC_0180 putative transcriptional regulator YP_001774411.1 PFAM: NmrA family protein; KEGG: azc:AZC_0181 putative isoflavone reductase YP_001774412.1 PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: bvi:Bcep1808_3823 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001774413.1 KEGG: mgi:Mflv_2459 hypothetical protein YP_001774414.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rso:RSc1759 probable trifunctional: enoyl-CoA hydratase and delta3-cis-delta2-trans-enoyl-CoA isomerase and 3-hydroxyacyl-CoA dehydrogenase oxidoreductase protein YP_001774415.1 PFAM: AMP-dependent synthetase and ligase; KEGG: fal:FRAAL3143 short-chain-fatty-acid--CoA ligase (acyl-CoA synthetase anaerobic) YP_001774416.1 PFAM: alpha/beta hydrolase fold; KEGG: swi:Swit_1744 alpha/beta hydrolase fold YP_001774417.1 KEGG: fgr:FG03721.1 hypothetical protein YP_001774418.1 KEGG: swi:Swit_0327 phytanoyl-CoA dioxygenase YP_001774419.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: swi:Swit_0311 carboxymuconolactone decarboxylase YP_001774420.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: swi:Swit_0326 helix-turn-helix-domain containing protein, AraC type YP_001774421.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpc:RPC_2740 transcriptional regulator, LysR family YP_001774422.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gme:Gmet_2236 short-chain dehydrogenase/reductase SDR YP_001774424.1 KEGG: bxe:Bxe_B1854 hypothetical protein YP_001774425.1 KEGG: swi:Swit_0355 hypothetical protein YP_001774426.1 PFAM: GTP cyclohydrolase I; KEGG: bpd:BURPS668_A0064 GTP cyclohydrolase I YP_001774427.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: rpa:RPA1941 possible 2-nitropropane dioxygenase YP_001774429.1 KEGG: bxe:Bxe_A2335 beta-ketothiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_001774430.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rpe:RPE_3802 AMP-dependent synthetase and ligase YP_001774431.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: reh:H16_B0395 acyl-CoA dehydrogenase YP_001774432.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rme:Rmet_3728 acyl-CoA dehydrogenase-like protein YP_001774433.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: swi:Swit_0385 enoyl-CoA hydratase/isomerase YP_001774434.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: fal:FRAAL3491 putative enoyl-CoA hydratase YP_001774435.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pla:Plav_0273 short-chain dehydrogenase/reductase SDR YP_001774436.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: mag:amb2607 dioxygenase related to 2-nitropropane dioxygenase YP_001774437.1 PFAM: regulatory protein LuxR; KEGG: swi:Swit_3622 regulatory protein, LuxR YP_001774438.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: eba:ebA1954 2-ketocyclohexanecarboxyl-CoA hydrolase YP_001774439.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: eba:ebA1956 putative 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase YP_001774440.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_3863 formyl-CoA transferase YP_001774441.1 PFAM: MaoC domain protein dehydratase; KEGG: bbr:BB4751 hypothetical protein YP_001774442.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bbr:BB4752 acyl-CoA dehydrogenase YP_001774443.1 PFAM: protein of unknown function DUF35; KEGG: bbr:BB2262 hypothetical protein YP_001774444.1 KEGG: bbr:BB2263 thiolase YP_001774445.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mav:MAV_5085 enoyl-CoA hydratase YP_001774446.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbr:BB0860 probable enoyl-CoA hydratase YP_001774447.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bpt:Bpet1222 enoyl-CoA hydratase YP_001774448.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpa:RPA0398 putative 2,4-dienoyl-CoA reductase (NADPH) precursor YP_001774449.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reu:Reut_B3876 L-carnitine dehydratase/bile acid-inducible protein F YP_001774450.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: azc:AZC_2876 putative acyl-CoA dehydrogenase YP_001774451.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rpb:RPB_1750 acyl-CoA dehydrogenase-like YP_001774452.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0118 acyl-CoA dehydrogenase domain protein YP_001774453.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpb:RPB_0111 enoyl-CoA hydratase/isomerase YP_001774454.1 PFAM: MaoC domain protein dehydratase; KEGG: bpt:Bpet0802 putative acyl dehydratase YP_001774455.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bpt:Bpet0815 putative acyl-CoA dehydrogenase YP_001774456.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rpb:RPB_1750 acyl-CoA dehydrogenase-like YP_001774457.1 PFAM: cytochrome P450; KEGG: swi:Swit_0361 cytochrome P450 YP_001774458.1 PFAM: Integrase catalytic region; KEGG: bpe:BP1810 transposase YP_001774459.1 PFAM: transposase IS3/IS911 family protein; KEGG: bxe:Bxe_A2633 putative transposase A, IS3/IS911 family YP_001774460.1 PFAM: regulatory protein TetR; KEGG: bxe:Bxe_C0959 transcriptional regulator, TetR family YP_001774461.1 KEGG: bxe:Bxe_B0480 hypothetical protein YP_001774462.1 PFAM: protein of unknown function DUF1302; KEGG: gme:Gmet_2248 hypothetical protein YP_001774463.1 PFAM: protein of unknown function DUF1329; KEGG: psa:PST_0616 hypothetical protein YP_001774464.1 KEGG: psa:PST_0617 glycosyl hydrolase YP_001774465.1 KEGG: gme:Gmet_2244 putative transporter YP_001774466.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: swi:Swit_0380 short-chain dehydrogenase/reductase SDR YP_001774467.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mxa:MXAN_2314 oxidoreductase, zinc-binding dehydrogenase family YP_001774468.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bbr:BB4759 electron transfer flavoprotein beta-subunit YP_001774469.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: pfl:PFL_1820 electron transfer flavoprotein, alpha subunit YP_001774470.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: swi:Swit_0336 Rieske (2Fe-2S) domain protein YP_001774471.1 initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione YP_001774472.1 PFAM: dehydrogenase E1 component; KEGG: swi:Swit_0346 pyruvate dehydrogenase (acetyl-transferring) YP_001774473.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: swi:Swit_0347 transketolase, central region YP_001774474.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: swi:Swit_0841 biotin/lipoyl attachment domain-containing protein YP_001774475.1 PFAM: catalytic domain of components of various dehydrogenase complexes; KEGG: cbd:COXBU7E912_1613 dihydrolipoyllysine-residue acetyltransferase E2 component of pyruvate dehydrogenase complex YP_001774476.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mes:Meso_4472 AMP-dependent synthetase and ligase YP_001774477.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001774478.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_C0269 putative enoyl-CoA hydratase/isomerase YP_001774479.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: swi:Swit_0376 acyl-CoA dehydrogenase domain protein YP_001774480.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rpe:RPE_3775 acyl-CoA dehydrogenase domain protein YP_001774481.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bja:blr2146 dehydrogenase YP_001774482.1 KEGG: swi:Swit_0292 hypothetical protein YP_001774483.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_A4896 short-chain dehydrogenase/reductase SDR YP_001774484.1 PFAM: ferredoxin; KEGG: mex:Mext_4466 ferredoxin YP_001774485.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pol:Bpro_5300 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001774486.1 PFAM: regulatory protein TetR; KEGG: cvi:CV_2724 probable transcriptional regulator, TetR family YP_001774487.1 PFAM: cytochrome P450; KEGG: swi:Swit_0364 cytochrome P450 YP_001774488.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: swi:Swit_0366 glucose-methanol-choline oxidoreductase YP_001774489.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: swi:Swit_0368 enoyl-CoA hydratase/isomerase YP_001774490.1 PFAM: beta-lactamase; KEGG: swi:Swit_0367 beta-lactamase YP_001774491.1 KEGG: pnu:Pnuc_1241 hypothetical protein YP_001774492.1 PFAM: HpcH/HpaI aldolase; KEGG: bam:Bamb_6255 HpcH/HpaI aldolase YP_001774493.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reu:Reut_B3545 short-chain dehydrogenase/reductase SDR YP_001774494.1 KEGG: swi:Swit_0361 cytochrome P450 YP_001774495.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: pmy:Pmen_4403 rubredoxin-type Fe(Cys)4 protein YP_001774496.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001774497.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: bur:Bcep18194_C7279 acetyl-CoA hydrolase/transferase YP_001774498.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pat:Patl_2713 alpha-methylacyl-CoA racemase YP_001774499.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: rpb:RPB_3433 2-nitropropane dioxygenase, NPD YP_001774500.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pnu:Pnuc_1558 enoyl-CoA hydratase/isomerase YP_001774501.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: dac:Daci_1197 enoyl-CoA hydratase/isomerase YP_001774502.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: swi:Swit_0289 L-carnitine dehydratase/bile acid-inducible protein F YP_001774503.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: swi:Swit_0335 short-chain dehydrogenase/reductase SDR YP_001774504.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bbr:BB4747 transcriptional regulator YP_001774505.1 PFAM: amidohydrolase 2; KEGG: swi:Swit_0313 amidohydrolase 2 YP_001774506.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: swi:Swit_1014 enoyl-CoA hydratase/isomerase YP_001774507.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bmu:Bmul_3805 short-chain dehydrogenase/reductase SDR YP_001774508.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: swi:Swit_0291 NADH:flavin oxidoreductase/NADH oxidase YP_001774509.1 PFAM: thioesterase superfamily protein; KEGG: vei:Veis_4380 thioesterase superfamily protein YP_001774510.1 PFAM: regulatory protein TetR; KEGG: fre:Franean1_4695 transcriptional regulator, TetR family YP_001774511.1 KEGG: fre:Franean1_4696 hypothetical protein YP_001774512.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mes:Meso_2942 short-chain dehydrogenase/reductase SDR YP_001774513.1 KEGG: fre:Franean1_4696 hypothetical protein YP_001774514.1 PFAM: acyl-CoA reductase; KEGG: fre:Franean1_4697 long-chain-fatty-acyl-CoA reductase YP_001774515.1 PFAM: regulatory protein MarR; KEGG: bbr:BB1890 putative transcriptional regulator (MarR family) YP_001774516.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: swi:Swit_0304 short-chain dehydrogenase/reductase SDR YP_001774517.1 PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: bur:Bcep18194_C6873 electron-transferring-flavoprotein dehydrogenase YP_001774518.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: hau:Haur_2140 alpha/beta hydrolase fold-3 domain protein YP_001774521.1 PFAM: helix-turn-helix domain protein; KEGG: bur:Bcep18194_A4980 transcriptional regulator, XRE family YP_001774522.1 KEGG: bur:Bcep18194_A4981 hypothetical protein YP_001774523.1 KEGG: bur:Bcep18194_A4982 hypothetical protein YP_001774524.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bur:Bcep18194_A4983 phage integrase YP_001774525.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bur:Bcep18194_C7449 histone-like nucleoid-structuring protein H-NS YP_001774526.1 KEGG: eba:ebA2450 hypothetical protein YP_001774527.1 KEGG: har:HEAR2200 hypothetical protein YP_001774528.1 KEGG: har:HEAR2201 hypothetical protein YP_001774529.1 KEGG: eba:ebA2448 hypothetical protein YP_001774530.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: eba:ebA2443 hypothetical protein YP_001774531.1 KEGG: pla:Plav_0317 hypothetical protein YP_001774533.1 PFAM: transposase IS3/IS911 family protein; KEGG: bxe:Bxe_B1867 hypothetical protein YP_001774534.1 PFAM: IS66 Orf2 family protein; KEGG: bxe:Bxe_A3793 putative transposase YP_001774535.1 PFAM: transposase IS66; KEGG: bxe:Bxe_B1865 transposase IS66 family YP_001774536.1 KEGG: har:HEAR3222 hypothetical protein YP_001774537.1 KEGG: har:HEAR3223 hypothetical protein YP_001774538.1 KEGG: har:HEAR3224 hypothetical protein YP_001774539.1 KEGG: har:HEAR3225 hypothetical protein YP_001774540.1 KEGG: bur:Bcep18194_C6887 hypothetical protein YP_001774541.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: sil:SPO3021 phytanoyl-CoA dioxygenase family protein YP_001774542.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate YP_001774543.1 PFAM: regulatory protein DeoR; KEGG: bur:Bcep18194_C6903 transcriptional regulator, DeoR family YP_001774544.1 KEGG: bur:Bcep18194_C6904 hypothetical protein YP_001774545.1 TIGRFAM: L-fucose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_C6905 L-fucose permease YP_001774546.1 TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: bur:Bcep18194_C6906 ribokinase YP_001774547.1 KEGG: amt:Amet_0229 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_001774548.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bld:BLi03701 hypothetical protein YP_001774549.1 KEGG: reh:H16_B0318 hypothetical protein YP_001774550.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate) YP_001774551.1 PFAM: Na+/solute symporter; KEGG: psp:PSPPH_3436 probable sodium/solute symporter YP_001774552.1 PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: eca:ECA3765 hypothetical protein YP_001774553.1 PFAM: regulatory protein DeoR; KEGG: bmu:Bmul_6108 transcriptional regulator, DeoR family YP_001774554.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: eca:ECA3767 probable short-chain dehydrogenase YP_001774555.1 PFAM: amino acid permease-associated region; KEGG: pfo:Pfl_2055 amino acid permease-associated region YP_001774556.1 PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_4038 transporter, putative YP_001774557.1 KEGG: pde:Pden_1093 putative transcriptional regulator, XRE family YP_001774558.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfo:Pfl_4369 binding-protein-dependent transport systems inner membrane component YP_001774559.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pin:Ping_1958 ABC sugar transporter inner membrane binding protein YP_001774560.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pde:Pden_1087 ABC transporter related YP_001774561.1 PFAM: inositol monophosphatase; KEGG: mex:Mext_3749 histidinol-phosphate phosphatase YP_001774562.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rha:RHA1_ro04550 probable transcriptional regulator, LacI family YP_001774563.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: rha:RHA1_ro04561 dehydrogenase YP_001774564.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rha:RHA1_ro04562 acetolactate synthase large subunit YP_001774565.1 KEGG: rha:RHA1_ro04563 hypothetical protein YP_001774566.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer YP_001774567.1 PFAM: porin Gram-negative type; KEGG: bvi:Bcep1808_6660 porin, gram-negative type YP_001774568.1 PFAM: extracellular solute-binding protein family 1; KEGG: bur:Bcep18194_A4071 ABC sugar transporter, periplasmic ligand binding protein YP_001774569.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: pde:Pden_1096 glycoside hydrolase, family 3 domain protein YP_001774570.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: pde:Pden_1096 glycoside hydrolase, family 3 domain protein YP_001774571.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpm:BURPS1710b_A0228 putative transport protein YP_001774572.1 KEGG: ent:Ent638_0388 hypothetical protein YP_001774573.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: xcv:XCV3885 [acyl-carrier protein] phosphodiesterase YP_001774574.1 KEGG: xcv:XCV3883 putative secreted protein YP_001774575.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pde:Pden_1099 xylose isomerase domain protein TIM barrel YP_001774576.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: pde:Pden_1098 glucose-methanol-choline oxidoreductase YP_001774577.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: ent:Ent638_0385 transcriptional regulator, AraC family YP_001774578.1 KEGG: rso:RSc2088 probable transmembrane protein YP_001774579.1 PFAM: FAD dependent oxidoreductase; tryptophan halogenase; KEGG: bpd:BURPS668_A2885 tryptophan halogenase PrnA YP_001774580.1 KEGG: bpm:BURPS1710b_A1116 PrnB YP_001774581.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: bur:Bcep18194_C6708 FAD dependent oxidoreductase YP_001774582.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bur:Bcep18194_C6709 Rieske (2Fe-2S) protein YP_001774583.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bvi:Bcep1808_6406 two component heavy metal response transcriptional regulator, winged helix family YP_001774584.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bvi:Bcep1808_6405 heavy metal sensor signal transduction histidine kinase YP_001774585.1 KEGG: bur:Bcep18194_B0515 hypothetical protein YP_001774586.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bvi:Bcep1808_6404 RND efflux system, outer membrane lipoprotein, NodT family YP_001774587.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bam:Bamb_5985 efflux transporter, RND family, MFP subunit YP_001774588.1 PFAM: acriflavin resistance protein; KEGG: bvi:Bcep1808_6402 acriflavin resistance protein YP_001774589.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: bam:Bamb_5677 transcriptional regulator, AbrB family YP_001774590.1 KEGG: bvi:Bcep1808_3868 hypothetical protein YP_001774591.1 PFAM: amino acid permease-associated region; KEGG: ypi:YpsIP31758_2147 L-asparagine permease YP_001774592.1 PFAM: extracellular solute-binding protein family 3; KEGG: bvi:Bcep1808_6286 extracellular solute-binding protein, family 3 YP_001774593.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_6285 polar amino acid ABC transporter, inner membrane subunit YP_001774594.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_6284 polar amino acid ABC transporter, inner membrane subunit YP_001774595.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_6283 ABC transporter related YP_001774596.1 KEGG: bam:Bamb_5983 hypothetical protein YP_001774598.1 PFAM: monooxygenase FAD-binding; KEGG: bvi:Bcep1808_6400 hypothetical protein YP_001774599.1 PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_1083 alpha/beta hydrolase fold YP_001774600.1 KEGG: bur:Bcep18194_A4952 hypothetical protein YP_001774601.1 PFAM: protein of unknown function DUF1275; KEGG: bvi:Bcep1808_6397 protein of unknown function DUF1275 YP_001774602.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5812 transcriptional regulator, LysR family YP_001774603.1 PFAM: protein of unknown function DUF1427; KEGG: bam:Bamb_5811 protein of unknown function DUF1427 YP_001774604.1 PFAM: isochorismatase hydrolase; KEGG: bam:Bamb_5810 isochorismatase hydrolase YP_001774605.1 PFAM: protein of unknown function DUF1427; KEGG: bam:Bamb_5809 protein of unknown function DUF1427 YP_001774606.1 PFAM: Amidohydrolase 3; KEGG: bur:Bcep18194_A4539 metal-dependent hydrolase YP_001774607.1 KEGG: bvi:Bcep1808_6396 hypothetical protein YP_001774608.1 KEGG: bvi:Bcep1808_6395 hypothetical protein YP_001774609.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_6394 transcriptional regulator, LysR family YP_001774610.1 PFAM: beta-lactamase domain protein; KEGG: bam:Bamb_5828 beta-lactamase domain protein YP_001774611.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bvi:Bcep1808_6393 helix-turn-helix-domain containing protein, AraC type YP_001774612.1 PFAM: transcriptional regulator domain protein; Tetratricopeptide TPR_4; SMART: AAA ATPase; KEGG: bvi:Bcep1808_6392 transcriptional regulator, winged helix family YP_001774613.1 PFAM: Amidohydrolase 3; KEGG: bvi:Bcep1808_6391 amidohydrolase 3 YP_001774614.1 KEGG: bvi:Bcep1808_6390 metal-dependent phosphohydrolase YP_001774615.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bvi:Bcep1808_6389 NADH:flavin oxidoreductase/NADH oxidase YP_001774616.1 PFAM: major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_6388 major facilitator superfamily MFS_1 YP_001774617.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_6387 transcriptional regulator, LysR family YP_001774618.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bvi:Bcep1808_6386 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding YP_001774619.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bvi:Bcep1808_6385 (2Fe-2S)-binding domain protein YP_001774620.1 PFAM: cytochrome c class I; KEGG: bvi:Bcep1808_6384 cytochrome c, class I YP_001774621.1 SMART: zinc finger UBP-type protein; KEGG: bur:Bcep18194_A4964 hypothetical protein YP_001774622.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bvi:Bcep1808_6377 thioredoxin-disulfide reductase YP_001774623.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bvi:Bcep1808_6376 RND efflux system, outer membrane lipoprotein, NodT family YP_001774624.1 PFAM: secretion protein HlyD family protein; KEGG: bvi:Bcep1808_6375 secretion protein HlyD family protein YP_001774625.1 PFAM: major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_6374 major facilitator superfamily MFS_1 YP_001774626.1 PFAM: alpha/beta hydrolase fold; KEGG: bvi:Bcep1808_6373 alpha/beta hydrolase fold YP_001774627.1 KEGG: bvi:Bcep1808_6372 hypothetical protein YP_001774628.1 PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_5814 alpha/beta hydrolase fold YP_001774629.1 PFAM: transcriptional regulator domain protein; KEGG: bvi:Bcep1808_6371 transcriptional regulator, winged helix family YP_001774630.1 PFAM: DoxX family protein; KEGG: bvi:Bcep1808_6370 DoxX family protein YP_001774631.1 PFAM: cyclic nucleotide-binding; MscS Mechanosensitive ion channel; KEGG: bxe:Bxe_B2387 cyclic nucleotide-regulated small mechanosensitive ion channel YP_001774632.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_6369 transcriptional regulator, LysR family YP_001774633.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A2883 transcriptional regulator, AraC family YP_001774634.1 PFAM: Aldose 1-epimerase; KEGG: bam:Bamb_5727 aldose 1-epimerase YP_001774635.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: bur:Bcep18194_C6912 phenazine biosynthesis PhzC/PhzF protein YP_001774636.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: bur:Bcep18194_C6918 transcriptional regulator, AraC family YP_001774637.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_C6919 short chain dehydrogenase YP_001774638.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_C6920 alpha/beta hydrolase YP_001774639.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_C6921 transcriptional regulator, LysR family YP_001774640.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_C6922 lysine exporter family(LysE/YggA) YP_001774641.1 KEGG: bur:Bcep18194_C6924 hypothetical protein YP_001774642.1 KEGG: bur:Bcep18194_C6925 hypothetical protein YP_001774643.1 KEGG: bam:Bamb_5720 hypothetical protein YP_001774644.1 KEGG: bam:Bamb_5719 hypothetical protein YP_001774645.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_5718 transcriptional regulator, AraC family YP_001774646.1 KEGG: bur:Bcep18194_C6929 hypothetical protein YP_001774647.1 KEGG: bur:Bcep18194_C6932 2-keto-4-pentenoate hydratase-like YP_001774648.1 PFAM: UspA domain protein; KEGG: bur:Bcep18194_C6944 universal stress protein, UspA family YP_001774649.1 KEGG: bam:Bamb_5713 hypothetical protein YP_001774650.1 PFAM: integrase family protein; KEGG: bur:Bcep18194_C6948 phage integrase YP_001774651.1 PFAM: TfoX domain protein; KEGG: bam:Bamb_5704 TfoX, N-terminal domain protein YP_001774652.1 KEGG: bur:Bcep18194_C6952 hypothetical protein YP_001774653.1 KEGG: bam:Bamb_5697 hypothetical protein YP_001774654.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bur:Bcep18194_C6954 transcriptional regulator, GntR family, contains an aminotransferase domain YP_001774655.1 PFAM: monooxygenase FAD-binding; KEGG: sma:SAV2835 polyketide hydroxylase YP_001774656.1 PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: sco:SCO0253 TetR-family transcriptional regulator YP_001774657.1 PFAM: thiamineS protein; KEGG: bmu:Bmul_5395 molybdopterin converting factor, subunit 1 YP_001774658.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: bur:Bcep18194_C6964 molybdopterin biosynthesis MoaE YP_001774659.1 KEGG: bur:Bcep18194_C6965 molybdenum cofactor synthesis protein; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB YP_001774660.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: bur:Bcep18194_C6966 molybdopterin binding protein, MoeA YP_001774661.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: bur:Bcep18194_C6967 formate dehydrogenase, subunit FdhD YP_001774662.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bur:Bcep18194_C6968 cytochrome bd ubiquinol oxidase, subunit I YP_001774663.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: bur:Bcep18194_C6969 cytochrome bd ubiquinol oxidase, subunit II YP_001774664.1 PFAM: protein of unknown function UPF0187; KEGG: bur:Bcep18194_C6970 hypothetical protein YP_001774665.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_C6974 putative glyoxalase/bleomycin resistance protein/dioxygenase YP_001774666.1 PFAM: ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: bam:Bamb_5698 ATPase AAA-2 domain protein YP_001774667.1 PFAM: Radical SAM domain protein; KEGG: bam:Bamb_5699 organic radical activating enzyme family protein YP_001774668.1 SMART: serine/threonine protein kinase; KEGG: bam:Bamb_5700 serine/threonine protein kinase YP_001774669.1 KEGG: bam:Bamb_5701 hypothetical protein YP_001774670.1 KEGG: bam:Bamb_5702 hypothetical protein YP_001774671.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001774672.1 KEGG: bur:Bcep18194_C6976 hypothetical protein YP_001774673.1 KEGG: bpt:Bpet4486 hypothetical protein YP_001774674.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_C6991 flavin-containing monooxygenase FMO YP_001774675.1 PFAM: Endoribonuclease L-PSP; KEGG: bam:Bamb_5674 endoribonuclease L-PSP YP_001774676.1 PFAM: protein of unknown function DUF1028; KEGG: bur:Bcep18194_C6993 protein of unknown function DUF1028 YP_001774677.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine YP_001774678.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_C6995 transcriptional regulator, LysR family YP_001774679.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bam:Bamb_5670 permease for cytosine/purines, uracil, thiamine, allantoin YP_001774680.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: bur:Bcep18194_C6997 oxidoreductase alpha (molybdopterin) subunit YP_001774681.1 PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_C6998 putative ClpA/B protease, ATPase subunit YP_001774682.1 KEGG: bur:Bcep18194_C6999 hypothetical protein YP_001774683.1 PFAM: Linocin_M18 bacteriocin protein; KEGG: bur:Bcep18194_C7000 Linocin_M18 bacteriocin protein YP_001774684.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: bur:Bcep18194_C7001 Dyp-type peroxidase YP_001776832.1 KEGG: psb:Psyr_4042 hypothetical protein YP_001776833.1 PFAM: transposase mutator type; KEGG: bvi:Bcep1808_0454 transposase, mutator type YP_001776834.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bam:Bamb_3751 transcriptional regulator, GntR family YP_001776835.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_3750 short-chain dehydrogenase/reductase SDR YP_001776836.1 PFAM: protein of unknown function DUF849; KEGG: bam:Bamb_3749 protein of unknown function DUF849 YP_001776837.1 PFAM: major facilitator superfamily MFS_1; KEGG: bmu:Bmul_4278 major facilitator superfamily MFS_1 YP_001776838.1 PFAM: Chloride channel core; KEGG: bur:Bcep18194_B1678 Cl-channel, voltage gated YP_001776839.1 PFAM: Amidohydrolase 3; KEGG: bam:Bamb_3745 N-isopropylammelide isopropylaminohydrolase YP_001776840.1 PFAM: porin Gram-negative type; KEGG: bam:Bamb_3742 porin, gram-negative type YP_001776841.1 KEGG: bur:Bcep18194_B1680 hypothetical protein YP_001776842.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1681 transcriptional regulator, LysR family YP_001776843.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: bur:Bcep18194_B1682 fusaric acid resistance protein YP_001776844.1 KEGG: bam:Bamb_3738 hypothetical protein YP_001776845.1 PFAM: peptidase S58 DmpA; KEGG: bur:Bcep18194_B1684 peptidase S58, DmpA YP_001776846.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B1685 amino acid transporter YP_001776847.1 PFAM: regulatory protein LuxR; KEGG: bur:Bcep18194_B1686 transcriptional regulator, LuxR family YP_001776848.1 PFAM: Secreted repeat of unknown function; KEGG: bam:Bamb_3731 secreted repeat of unknown function YP_001776849.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B1697 methylmalonate-semialdehyde dehydrogenase YP_001776850.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate YP_001776851.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1699 transcriptional regulator, LysR family YP_001776852.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1700 hypothetical protein YP_001776853.1 KEGG: bur:Bcep18194_B1701 hypothetical protein YP_001776854.1 PFAM: regulatory protein MarR; KEGG: bam:Bamb_3726 transcriptional regulator, MarR family YP_001776855.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bvi:Bcep1808_4860 cupin 2, conserved barrel domain protein YP_001776856.1 PFAM: Epoxide hydrolase domain protein; KEGG: bur:Bcep18194_B1704 epoxide hydrolase-like YP_001776857.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_B1705 transcriptional regulator, AraC family YP_001776858.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B1706 short-chain dehydrogenase/reductase SDR YP_001776859.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1709 major facilitator superfamily (MFS_1) transporter YP_001776860.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1710 major facilitator superfamily (MFS_1) transporter YP_001776861.1 PFAM: beta-lactamase domain protein; KEGG: bur:Bcep18194_B1711 beta-lactamase-like YP_001776862.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bur:Bcep18194_B1712 transcriptional regulator, IclR family YP_001776863.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bam:Bamb_3718 transcriptional regulator, AsnC family YP_001776864.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bam:Bamb_3717 lysine exporter protein (LysE/YggA) YP_001776865.1 PFAM: TrkA-N domain protein; Ion transport protein; Ion transport 2 domain protein; KEGG: bur:Bcep18194_B1715 voltage-gated potassium channel YP_001776866.1 KEGG: bam:Bamb_3715 membrane protein-like protein YP_001776867.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bam:Bamb_3714 methyl-accepting chemotaxis sensory transducer YP_001776868.1 activates fatty acids by binding to coenzyme A YP_001776869.1 PFAM: cyclic nucleotide-binding; KEGG: bur:Bcep18194_B1725 cyclic nucleotide-binding domain (cNMP-BD) protein YP_001776870.1 PFAM: acriflavin resistance protein; KEGG: bur:Bcep18194_B1726 acriflavin resistance protein YP_001776871.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bur:Bcep18194_B1727 secretion protein, HlyD family YP_001776872.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bam:Bamb_3709 RND efflux system, outer membrane lipoprotein, NodT family YP_001776873.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_B1729 two component heavy metal response transcriptional regulator, winged helix family YP_001776874.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bam:Bamb_3707 heavy metal sensor signal transduction histidine kinase YP_001776875.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_6548 transcriptional regulator, AraC family YP_001776876.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia YP_001776877.1 KEGG: bam:Bamb_6546 putative phenylacetaldoxime dehydratase YP_001776878.1 KEGG: bam:Bamb_6545 hypothetical protein YP_001776879.1 KEGG: bam:Bamb_6544 nitrile hydratase, alpha subunit; TIGRFAM: nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase alpha chain YP_001776880.1 PFAM: nitrile hydratase beta subunit; KEGG: bam:Bamb_6543 nitrile hydratase YP_001776881.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bam:Bamb_6542 cobalamin synthesis protein, P47K YP_001776882.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B1731 lysine exporter family protein (LysE/YggA) YP_001776883.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: bur:Bcep18194_B1732 transcriptional regulator, AraC family YP_001776884.1 KEGG: bpl:BURPS1106A_0386 hypothetical protein YP_001776885.1 KEGG: bpl:BURPS1106A_0386 hypothetical protein YP_001776886.1 KEGG: bpl:BURPS1106A_0386 hypothetical protein YP_001776887.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B1733 short-chain dehydrogenase/reductase SDR YP_001776888.1 KEGG: bam:Bamb_3703 hypothetical protein YP_001776889.1 PFAM: protein of unknown function UPF0118; KEGG: bur:Bcep18194_B1735 hypothetical protein YP_001776890.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bam:Bamb_3701 NADH:flavin oxidoreductase/NADH oxidase YP_001776891.1 PFAM: ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_B1737 ThiJ/PfpI family protein YP_001776892.1 KEGG: bam:Bamb_3699 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_001776893.1 PFAM: glycoside hydrolase family 68; KEGG: bam:Bamb_3698 levansucrase YP_001776894.1 KEGG: bam:Bamb_3697 levanase; PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32 YP_001776895.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B1738 short chain dehydrogenase YP_001776896.1 PFAM: regulatory protein MarR; regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1739 transcriptional regulator, LysR family YP_001776897.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bur:Bcep18194_B1740 transcriptional regulator, GntR family with aminotransferase activity YP_001776898.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: bur:Bcep18194_B1741 alkylhydroperoxidase AhpD core YP_001776899.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bvi:Bcep1808_4830 cupin 2, conserved barrel domain protein YP_001776900.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B1748 outer membrane protein (porin) YP_001776901.1 PFAM: Squalene/phytoene synthase; KEGG: bur:Bcep18194_B1749 squalene/phytoene synthase YP_001776902.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bur:Bcep18194_B1750 glycerophosphoryl diester phosphodiesterase YP_001776903.1 PFAM: Rhodanese domain protein; KEGG: bur:Bcep18194_B1751 rhodanese-like protein YP_001776904.1 PFAM: cysteine dioxygenase type I; KEGG: bam:Bamb_3683 cysteine dioxygenase type I YP_001776905.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1753 transcriptional regulator, LysR family YP_001776906.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_B1754 acyl-CoA dehydrogenase YP_001776907.1 PFAM: luciferase family protein; KEGG: bur:Bcep18194_B1755 alkanesulfonate monooxygenase YP_001776908.1 PFAM: class II aldolase/adducin family protein; KEGG: bmu:Bmul_4335 class II aldolase/adducin family protein YP_001776909.1 PFAM: NMT1/THI5 like domain protein; KEGG: bur:Bcep18194_B1757 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components YP_001776910.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_3677 binding-protein-dependent transport systems inner membrane component YP_001776911.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_B1759 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit YP_001776912.1 PFAM: cytochrome c class I; KEGG: bur:Bcep18194_B1760 hypothetical protein YP_001776913.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; KEGG: bur:Bcep18194_B1761 ABC transporter, substrate-binding protein, aliphatic sulphonates YP_001776914.1 PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: bur:Bcep18194_B1762 uncharacterized Fe-S protein YP_001776915.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: bur:Bcep18194_B1763 periplasmic sensor signal transduction histidine kinase YP_001776916.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_B1764 two component transcriptional regulator, winged helix family YP_001776917.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1765 drug resistance transporter Bcr/CflA subfamily YP_001776918.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bur:Bcep18194_B1766 transcriptional regulator, GntR family with aminotransferase activity YP_001776919.1 PFAM: extracellular solute-binding protein family 1; KEGG: bur:Bcep18194_B1767 ABC Fe3+ siderophore transporter, periplasmic ligand binding protein YP_001776920.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B1768 ABC Fe3+ siderophore transporter, inner membrane subunit YP_001776921.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_B1769 ABC transporter, ATPase subunit YP_001776922.1 PFAM: porin Gram-negative type; KEGG: bam:Bamb_3663 porin, gram-negative type YP_001776923.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_B1771 zinc-containing alcohol dehydrogenase superfamily YP_001776924.1 KEGG: bur:Bcep18194_B1772 hypothetical protein YP_001776925.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B1773 transcriptional regulator, AraC family YP_001776926.1 KEGG: bur:Bcep18194_B1777 2-dehydro-3-deoxyglucarate aldolase; TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase YP_001776927.1 KEGG: bam:Bamb_3658 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Hydratase/decarboxylase YP_001776928.1 PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: bur:Bcep18194_B1779 5-carboxymethyl-2-hydroxymuconate isomerase YP_001776929.1 KEGG: bur:Bcep18194_B1780 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD_Fe; TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B YP_001776930.1 TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B1781 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase YP_001776931.1 KEGG: bur:Bcep18194_B1782 5-carboxymethyl-2-hydroxymuconate delta-isomerase; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase YP_001776932.1 KEGG: bam:Bamb_3653 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase YP_001776933.1 TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_B1784 transcriptional regulator, MarR family YP_001776934.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: bur:Bcep18194_B1785 NAD-dependent epimerase/dehydratase YP_001776935.1 KEGG: bur:Bcep18194_B1787 hypothetical protein YP_001776936.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: bur:Bcep18194_B1788 peptidoglycan glycosyltransferase YP_001776937.1 PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: bur:Bcep18194_B1791 TrkA-N family protein YP_001776938.1 PFAM: cytochrome c class I; KEGG: bur:Bcep18194_B1792 cytochrome c, class I YP_001776939.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: bur:Bcep18194_B1793 glucose-methanol-choline oxidoreductase YP_001776940.1 KEGG: bur:Bcep18194_B1794 hypothetical protein YP_001776941.1 KEGG: bur:Bcep18194_B1796 hypothetical protein YP_001776942.1 TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; KEGG: bur:Bcep18194_B1797 alanine dehydrogenase and pyridine nucleotide transhydrogenase YP_001776943.1 PFAM: PHP domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding class 1; KEGG: bur:Bcep18194_B1798 DNA polymerase IV (family X) YP_001776944.1 PFAM: zinc finger DksA/TraR C4-type; KEGG: bur:Bcep18194_B1799 transcriptional regulators, TraR/DksA family YP_001776945.1 TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: bur:Bcep18194_B1801 sugar transferase YP_001776946.1 SMART: regulatory protein Crp; KEGG: bur:Bcep18194_B1802 putative transcriptional regulator, Crp/Fnr family YP_001776947.1 PFAM: cyclic nucleotide-binding; KEGG: bur:Bcep18194_B1803 cyclic nucleotide-binding domain (cNMP-BD) protein YP_001776948.1 Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides YP_001776949.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_B1805 acyl-CoA dehydrogenase-like YP_001776950.1 KEGG: bur:Bcep18194_B1806 hypothetical protein YP_001776951.1 PFAM: Domain of unknown function DUF1839; KEGG: bur:Bcep18194_B1807 hypothetical protein YP_001776952.1 KEGG: bur:Bcep18194_B1808 beta-mannosidase YP_001776953.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bam:Bamb_3632 sigma54 specific transcriptional regulator, fis family YP_001776954.1 KEGG: bur:Bcep18194_B1811 acyltransferase-like YP_001776955.1 KEGG: bur:Bcep18194_B1812 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein YP_001776956.1 PFAM: glycosyl transferase group 1; KEGG: bam:Bamb_3626 glycosyl transferase, group 1 YP_001776957.1 PFAM: glycosyl transferase group 1; KEGG: bam:Bamb_3625 glycosyl transferase, group 1 YP_001776958.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: bpd:BURPS668_A2840 capsular exopolysaccharide family YP_001776959.1 KEGG: bte:BTH_II0395 hypothetical protein YP_001776960.1 KEGG: bpd:BURPS668_A2837 permeases of the major facilitator superfamily YP_001776961.1 PFAM: polysaccharide biosynthesis protein; KEGG: bvi:Bcep1808_4768 polysaccharide biosynthesis protein YP_001776962.1 PFAM: glycosyl transferase group 1; KEGG: bmu:Bmul_4404 glycosyl transferase group 1 YP_001776963.1 KEGG: bmu:Bmul_4405 hypothetical protein YP_001776964.1 PFAM: polysaccharide export protein; KEGG: bur:Bcep18194_B1817 polysaccharide export protein YP_001776965.1 KEGG: bur:Bcep18194_B0441 outer membrane protein, haemagluttinin-like YP_001776966.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: bur:Bcep18194_B1822 beta-glucosidase YP_001776968.1 KEGG: bur:Bcep18194_B1829 hypothetical protein YP_001776969.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1830 transcriptional regulator, LysR family YP_001776970.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: bam:Bamb_3596 protein of unknown function UPF0029 YP_001776971.1 PFAM: protein of unknown function DUF344; KEGG: bmu:Bmul_4413 protein of unknown function DUF344 YP_001776972.1 PFAM: OmpW family protein; KEGG: bur:Bcep18194_B1835 OmpW family protein YP_001776973.1 KEGG: bur:Bcep18194_B1836 multidrug resistance efflux pump-like YP_001776974.1 KEGG: bur:Bcep18194_B1837 hypothetical protein YP_001776975.1 PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: bur:Bcep18194_B1838 ABC bacteriocin/lantibiotic efflux pump, with peptidase C39, bacteriocin processing YP_001776976.1 KEGG: bur:Bcep18194_B1839 hypothetical protein YP_001776977.1 KEGG: bur:Bcep18194_B1840 hypothetical protein YP_001776978.1 PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B1841 outer membrane efflux protein YP_001776979.1 PFAM: helix-turn-helix HxlR type; KEGG: bur:Bcep18194_B1848 putative transcriptional regulator YP_001776980.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B1849 alpha/beta hydrolase YP_001776981.1 KEGG: bur:Bcep18194_B1850 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_001776982.1 KEGG: bam:Bamb_3592 hypothetical protein YP_001776983.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: bur:Bcep18194_B1852 DEAD/DEAH box helicase YP_001776984.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B1853 putative amino acid transporter YP_001776985.1 KEGG: bur:Bcep18194_B1854 hypothetical protein YP_001776986.1 PFAM: protein of unknown function DUF891; KEGG: bur:Bcep18194_B1855 protein of unknown function DUF891 YP_001776987.1 TIGRFAM: pca operon transcription factor PcaQ; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_3582 transcriptional regulator, LysR family YP_001776988.1 PFAM: helix-turn-helix domain protein; KEGG: bam:Bamb_3581 transcriptional regulator, XRE family YP_001776989.1 KEGG: bur:Bcep18194_B1858 hypothetical protein YP_001776990.1 TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: bur:Bcep18194_B1859 intradiol ring-cleavage dioxygenase YP_001776991.1 KEGG: bur:Bcep18194_B1860 protocatechuate 3,4-dioxygenase; TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase YP_001776992.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B1861 transcriptional regulator, AraC family YP_001776993.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B1862 alpha/beta hydrolase YP_001776994.1 PFAM: peptidase M55 D-aminopeptidase; KEGG: bur:Bcep18194_B1863 peptidase M55, D-aminopeptidase YP_001776995.1 PFAM: peptidase S58 DmpA; KEGG: bur:Bcep18194_B1864 peptidase S58, DmpA YP_001776996.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B1865 ABC dipeptide/oligopeptide/nickel family transporter, inner membrane subunit YP_001776997.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_4721 binding-protein-dependent transport systems inner membrane component YP_001776998.1 PFAM: extracellular solute-binding protein family 5; KEGG: bam:Bamb_3571 extracellular solute-binding protein, family 5 YP_001776999.1 KEGG: bur:Bcep18194_B1868 ABC dipeptide/oligopeptide/nickel family transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001777000.1 PFAM: peptidase T2 asparaginase 2; KEGG: bvi:Bcep1808_4718 peptidase T2, asparaginase 2 YP_001777001.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bur:Bcep18194_B1870 transcriptional regulator, RpiR family YP_001777002.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1871 major facilitator superfamily (MFS_1) transporter YP_001777003.1 PFAM: glycoside hydrolase family 31; KEGG: bur:Bcep18194_B1872 alpha-glucosidase YP_001777004.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B1873 outer membrane protein (porin) YP_001777005.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: bur:Bcep18194_B1874 BCCT transporter YP_001777006.1 KEGG: bur:Bcep18194_B1875 hypothetical protein YP_001777007.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_B1876 methylase involved in ubiquinone/menaquinone biosynthesis-like YP_001777008.1 PFAM: metallophosphoesterase; KEGG: bur:Bcep18194_B1877 metallophosphoesterase YP_001777009.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: bur:Bcep18194_B1878 di-haem cytochrome c peroxidase YP_001777010.1 KEGG: bur:Bcep18194_B1879 hypothetical protein YP_001777011.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: bur:Bcep18194_B1882 YeeE/YedE family membrane protein YP_001777012.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: bvi:Bcep1808_4707 protein of unknown function DUF395, YeeE/YedE YP_001777013.1 PFAM: regulatory protein ArsR; KEGG: bur:Bcep18194_B1884 transcriptional regulator, ArsR family YP_001777014.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1885 major facilitator superfamily (MFS_1) transporter YP_001777015.1 catalyzes the formation of catechol from salicylate YP_001777016.1 TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_B1887 maleylacetoacetate isomerase YP_001777017.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bur:Bcep18194_B1888 fumarylacetoacetate (FAA) hydrolase YP_001777018.1 TIGRFAM: gentisate 1,2-dioxygenase; PFAM: Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_B1889 gentisate 1,2-dioxygenase YP_001777019.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1890 transcriptional regulator, LysR family YP_001777020.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B1891 pyridine nucleotide-disulphide oxidoreductase YP_001777021.1 PFAM: ferredoxin; KEGG: bur:Bcep18194_B1892 ferredoxin YP_001777022.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B1893 FAD dependent oxidoreductase YP_001777023.1 PFAM: proline racemase; KEGG: bur:Bcep18194_B1894 proline racemase YP_001777024.1 PFAM: dihydrodipicolinate synthetase; KEGG: bur:Bcep18194_B1895 dihydrodipicolinate synthetase YP_001777025.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B1896 amino acid transporter YP_001777026.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B1897 aldehyde dehydrogenase YP_001777027.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: bur:Bcep18194_B1898 malate/L-lactate dehydrogenase YP_001777028.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_001777029.1 PFAM: SH3 type 3 domain protein; KEGG: bur:Bcep18194_B1900 uncharacterized protein with a SH3 domain YP_001777030.1 KEGG: bur:Bcep18194_B1901 hypothetical protein YP_001777031.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: bur:Bcep18194_B1902 sigma 38 (RpoS) YP_001777032.1 SMART: Helix-hairpin-helix DNA-binding class 1; KEGG: bur:Bcep18194_B1903 DNA polymerase IV (family X)-like YP_001777033.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bur:Bcep18194_B1905 transcriptional regulator, MerR family YP_001777034.1 KEGG: bur:Bcep18194_B1906 hypothetical protein YP_001777035.1 PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_B1907 transcriptional regulator, MarR family YP_001777036.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1908 drug resistance transporter EmrB/QacA subfamily YP_001777037.1 KEGG: bur:Bcep18194_B1909 acetyl-CoA hydrolase; TIGRFAM: succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase YP_001777038.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bur:Bcep18194_B1910 CDP-alcohol phosphatidyltransferase YP_001777039.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: bur:Bcep18194_B1911 2OG-Fe(II) oxygenase YP_001777040.1 TIGRFAM: membrane protein; KEGG: bur:Bcep18194_B1912 hypothetical protein YP_001777041.1 KEGG: bam:Bamb_3536 sugar nucleotidyltransferase-like protein YP_001777042.1 TIGRFAM: phosphoenolpyruvate phosphomutase; KEGG: bur:Bcep18194_B1914 isocitrate lyase and phosphorylmutase YP_001777043.1 TIGRFAM: phosphonopyruvate decarboxylase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: bmu:Bmul_4472 phosphonopyruvate decarboxylase YP_001777044.1 TIGRFAM: 2-aminoethylphosphonate aminotransferase; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bur:Bcep18194_B1916 aminotransferase, class V YP_001777045.1 PFAM: Extracellular ligand-binding receptor; KEGG: bam:Bamb_0192 extracellular ligand-binding receptor YP_001777046.1 PFAM: Asparaginase/glutaminase; KEGG: rrs:RoseRS_2187 asparaginase/glutaminase YP_001777047.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: aav:Aave_0152 pyridoxal-5'-phosphate-dependent enzyme, beta subunit YP_001777048.1 PFAM: YheO domain protein; KEGG: dac:Daci_5755 YheO domain protein YP_001777049.1 PFAM: Integrase catalytic region; KEGG: msm:MSMEG_2675 ISMsm8, transposase YP_001777050.1 PFAM: acyltransferase 3; KEGG: bur:Bcep18194_B1920 acyltransferase 3 YP_001777051.1 KEGG: bur:Bcep18194_B1929 peptidase S33, proline iminopeptidase 1; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold YP_001777052.1 KEGG: bam:Bamb_3525 hypothetical protein YP_001777053.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: bur:Bcep18194_B1931 transglutaminase-like YP_001777054.1 PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: bur:Bcep18194_B1932 hypothetical protein YP_001777055.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: bur:Bcep18194_B1933 transglutaminase-like YP_001777056.1 PFAM: transglutaminase domain protein; KEGG: bur:Bcep18194_B1934 transglutaminase-like enzyme putative cysteine protease-like YP_001777057.1 PFAM: protein of unknown function DUF403; KEGG: bur:Bcep18194_B1935 protein of unknown function DUF403 YP_001777058.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: bur:Bcep18194_B1936 hypothetical protein YP_001777059.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1937 transcriptional regulator, LysR family YP_001777060.1 KEGG: bur:Bcep18194_B1938 hypothetical protein YP_001777061.1 KEGG: bam:Bamb_3516 hypothetical protein YP_001777062.1 KEGG: bur:Bcep18194_B1940 hypothetical protein YP_001777063.1 PFAM: polysaccharide deacetylase; KEGG: bur:Bcep18194_B1941 polysaccharide deacetylase YP_001777064.1 predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein YP_001777065.1 KEGG: bam:Bamb_3512 hypothetical protein YP_001777066.1 TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: bur:Bcep18194_B1944 glucosamine-fructose-6-phosphate aminotransferase, isomerising YP_001777067.1 KEGG: bur:Bcep18194_B1945 hypothetical protein YP_001777068.1 PFAM: cytochrome c class I; KEGG: bur:Bcep18194_B1946 cytochrome c, class I YP_001777069.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide YP_001777070.1 KEGG: bur:Bcep18194_B1949 hypothetical protein YP_001777071.1 PFAM: Extracellular ligand-binding receptor; KEGG: bur:Bcep18194_B1950 ABC branched chain amino acid family transporter, periplasmic ligand binding protein YP_001777072.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1951 transcriptional regulator, LysR family YP_001777073.1 KEGG: bvi:Bcep1808_4656 hypothetical protein YP_001777074.1 PFAM: PilT protein domain protein; KEGG: bvi:Bcep1808_4655 PilT protein domain protein YP_001777075.1 TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bam:Bamb_3501 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_001777076.1 TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B1954 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001777077.1 KEGG: bur:Bcep18194_B1955 hypothetical protein YP_001777078.1 PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: bam:Bamb_3498 aspartyl/asparaginyl beta-hydroxylase YP_001777079.1 KEGG: bur:Bcep18194_B1956 hypothetical protein YP_001777080.1 PFAM: aminotransferase class-III; KEGG: bur:Bcep18194_B1957 hypothetical protein YP_001777081.1 PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: bam:Bamb_3495 peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase YP_001777082.1 similar to ATP-binding component of ABC transporters YP_001777083.1 similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine YP_001777084.1 similar to periplasmic-binding component of ABC transporters YP_001777085.1 KEGG: bur:Bcep18194_B1962 ABC efflux pump, fused ATPase and inner membrane subunits; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase YP_001777086.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_3492 transcriptional regulator, LysR family YP_001777087.1 KEGG: bur:Bcep18194_B1964 membrane protein-like YP_001777088.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer YP_001777089.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001777090.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_3488 major facilitator superfamily MFS_1 YP_001777091.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_3487 transcriptional regulator, LysR family YP_001777092.1 KEGG: mms:mma_0460 hypothetical protein YP_001777093.1 KEGG: bur:Bcep18194_B1967 hypothetical protein YP_001777094.1 PFAM: response regulator receiver; KEGG: bvi:Bcep1808_4641 response regulator receiver protein YP_001777095.1 KEGG: bur:Bcep18194_B1976 hypothetical protein YP_001777096.1 KEGG: bur:Bcep18194_B1977 hypothetical protein YP_001777097.1 PFAM: chemotaxis sensory transducer; KEGG: bur:Bcep18194_B1978 methyl-accepting chemotaxis sensory transducer YP_001777098.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: PAC repeat-containing protein; KEGG: bur:Bcep18194_B1979 putative CheA signal transduction histidine kinase YP_001777099.1 PFAM: phospholipase/Carboxylesterase; KEGG: bur:Bcep18194_B1982 phospholipase/carboxylesterase YP_001777100.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B1983 amino acid transporter YP_001777101.1 catalyzes the formation of fumarate from aspartate YP_001777102.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1985 transcriptional regulator, LysR family YP_001777103.1 PFAM: L-asparaginase II; KEGG: bur:Bcep18194_B1986 L-asparaginase II YP_001777104.1 KEGG: bam:Bamb_0215 hypothetical protein YP_001777105.1 KEGG: bam:Bamb_0214 hypothetical protein YP_001777106.1 KEGG: bur:Bcep18194_B2007 hypothetical protein YP_001777107.1 KEGG: bur:Bcep18194_B2011 hypothetical protein YP_001777108.1 PFAM: protein of unknown function DUF979; KEGG: bur:Bcep18194_B2012 protein of unknown function DUF979 YP_001777109.1 PFAM: protein of unknown function DUF969; KEGG: bur:Bcep18194_B2013 protein of unknown function DUF969 YP_001777110.1 KEGG: bmu:Bmul_4533 hypothetical protein YP_001777111.1 KEGG: bur:Bcep18194_B2015 hypothetical protein YP_001777112.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins YP_001777113.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: bur:Bcep18194_B2018 diguanylate cyclase (GGDEF domain) YP_001777114.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold domain protein; KEGG: bur:Bcep18194_B2019 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with GAF sensor YP_001777115.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bte:BTH_II0243 transcriptional regulator, LysR family YP_001777116.1 PFAM: isochorismatase hydrolase; KEGG: bte:BTH_II0242 isochorismatase, isochorismatase family YP_001777117.1 TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bur:Bcep18194_B2027 haloacid dehalogenase, type II YP_001777118.1 KEGG: bur:Bcep18194_B2030 hypothetical protein YP_001777119.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2031 transcriptional regulator, LysR family YP_001777120.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2032 major facilitator superfamily (MFS_1) transporter YP_001777121.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B2033 methylmalonate-semialdehyde dehydrogenase YP_001777122.1 KEGG: bur:Bcep18194_B2034 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_001777123.1 KEGG: bvi:Bcep1808_4619 hypothetical protein YP_001777124.1 PFAM: cytochrome c class I; KEGG: bmu:Bmul_4545 gluconate 2-dehydrogenase (acceptor) YP_001777125.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bmu:Bmul_4546 (2Fe-2S)-binding domain protein YP_001777126.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bmu:Bmul_4547 monooxygenase FAD-binding YP_001777127.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: bmu:Bmul_4548 Asp/Glu/hydantoin racemase YP_001777128.1 PFAM: alpha/beta hydrolase fold; KEGG: bmu:Bmul_4549 alpha/beta hydrolase fold YP_001777129.1 KEGG: bmu:Bmul_4550 hypothetical protein YP_001777130.1 PFAM: isochorismatase hydrolase; KEGG: bmu:Bmul_4551 isochorismatase hydrolase YP_001777131.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bmu:Bmul_4552 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_001777132.1 PFAM: regulatory protein MarR; KEGG: bmu:Bmul_4553 transcriptional regulator, MarR family YP_001777133.1 PFAM: major facilitator superfamily MFS_1; KEGG: bmu:Bmul_4554 major facilitator superfamily MFS_1 YP_001777134.1 KEGG: bur:Bcep18194_B2036 hypothetical protein YP_001777135.1 KEGG: bam:Bamb_3438 hypothetical protein YP_001777136.1 KEGG: bmu:Bmul_4557 hypothetical protein YP_001777137.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bur:Bcep18194_B2039 cytosine/purines, uracil, thiamine, allantoin transporter YP_001777138.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: bur:Bcep18194_B2040 Asp/Glu racemase YP_001777139.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2041 transcriptional regulator, LysR family YP_001777140.1 KEGG: ypi:YpsIP31758_0485 hypothetical protein YP_001777141.1 KEGG: bur:Bcep18194_B2045 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein YP_001777142.1 KEGG: bur:Bcep18194_B2046 hypothetical protein YP_001777143.1 PFAM: glycosyl transferase family 2; KEGG: bur:Bcep18194_B2047 glycosyl transferase, family 2 YP_001777144.1 KEGG: bur:Bcep18194_B2048 hypothetical protein YP_001777145.1 KEGG: bur:Bcep18194_B2061 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein YP_001777146.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2062 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit YP_001777147.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2063 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit YP_001777148.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_B2064 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit YP_001777149.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bur:Bcep18194_B2065 taurine dioxygenase YP_001777150.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bur:Bcep18194_B2066 taurine dioxygenase YP_001777151.1 PFAM: extracellular solute-binding protein family 5; KEGG: bur:Bcep18194_B2067 ABC peptide transporter, periplasmic ligand binding protein YP_001777152.1 PFAM: protein of unknown function DUF427; KEGG: bam:Bamb_3415 protein of unknown function DUF427 YP_001777153.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_B2069 ABC transporter, substrate-binding protein, aliphatic sulphonates YP_001777154.1 PFAM: protein of unknown function DUF1089; KEGG: bur:Bcep18194_B2070 protein of unknown function DUF1089 YP_001777155.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2071 transcriptional regulator, LysR family YP_001777156.1 catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system YP_001777157.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: bur:Bcep18194_B2074 response regulator receiver domain protein (CheY-like) YP_001777158.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: bur:Bcep18194_B2075 ornithine decarboxylase YP_001777159.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2076 major facilitator superfamily (MFS_1) transporter YP_001777160.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bur:Bcep18194_B2077 iron-containing alcohol dehydrogenase YP_001777161.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bur:Bcep18194_B2078 antibiotic biosynthesis monooxygenase YP_001777162.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B2084 short-chain dehydrogenase/reductase SDR YP_001777163.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2085 transcriptional regulator, LysR family YP_001777164.1 TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: bur:Bcep18194_B2088 xanthine/uracil transporter YP_001777165.1 PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_B2090 NUDIX hydrolase YP_001777166.1 KEGG: bam:Bamb_3405 hypothetical protein YP_001777168.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bam:Bamb_6404 short-chain dehydrogenase/reductase SDR YP_001777169.1 KEGG: eca:ECA4052 hypothetical protein YP_001777170.1 PFAM: helix-turn-helix HxlR type; KEGG: bam:Bamb_6402 transcriptional regulator, HxlR family YP_001777171.1 PFAM: amino acid permease-associated region; KEGG: bvi:Bcep1808_1626 amino acid permease-associated region YP_001777172.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bam:Bamb_1638 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001777173.1 PFAM: regulatory protein LuxR; KEGG: bam:Bamb_1637 transcriptional regulator, LuxR family YP_001777174.1 SMART: regulatory protein LacI; KEGG: bur:Bcep18194_B2717 transcriptional regulator, LacI family YP_001777175.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rle:RL0302 putative AraC family transcriptional regulator YP_001777176.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2608 transcriptional regulator, LysR family YP_001777177.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2605 major facilitator superfamily (MFS)metabolite/H+ symporter YP_001777178.1 KEGG: bxe:Bxe_B2604 hypothetical protein YP_001777179.1 PFAM: Tannase and feruloyl esterase; KEGG: reu:Reut_C5946 tannase and feruloyl esterase YP_001777180.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: rle:RL0304 putative CoA reductase YP_001777181.1 TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: bur:Bcep18194_B2095 translation elongation factor, selenocysteine-specific YP_001777182.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis YP_001777183.1 TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein; KEGG: bur:Bcep18194_B2097 formate dehydrogenase accessory protein YP_001777184.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: bur:Bcep18194_B2098 formate dehydrogenase, gamma subunit YP_001777185.1 TIGRFAM: formate dehydrogenase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Formate dehydrogenase transmembrane domain protein; KEGG: bvi:Bcep1808_4487 formate dehydrogenase, beta subunit YP_001777186.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molydopterin dinucleotide-binding region; KEGG: bur:Bcep18194_B2100 formate dehydrogenase, alpha subunit, anaerobic YP_001777187.1 PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: bur:Bcep18194_B2101 molybdopterin oxidoreductase YP_001777188.1 PFAM: ribonuclease BN; KEGG: bur:Bcep18194_B2102 ribonuclease BN YP_001777189.1 PFAM: porin Gram-negative type; KEGG: bvi:Bcep1808_4483 porin, gram-negative type YP_001777190.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: bur:Bcep18194_B2104 3-demethylubiquinone-9 3-methyltransferase YP_001777191.1 streptomycin 3'-adenyltransferase YP_001777192.1 PFAM: histone family protein DNA-binding protein; KEGG: bur:Bcep18194_B2106 histone-like DNA-binding protein YP_001777193.1 PFAM: acyltransferase 3; KEGG: bur:Bcep18194_B2107 acyltransferase 3 YP_001777194.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: bur:Bcep18194_B2109 UTP--glucose-1-phosphate uridylyltransferase YP_001777195.1 KEGG: bvi:Bcep1808_4478 hypothetical protein YP_001777196.1 PFAM: acyltransferase 3; KEGG: bur:Bcep18194_B2110 acyltransferase 3 YP_001777197.1 PFAM: glycosyl transferase group 1; KEGG: bur:Bcep18194_B2111 glycosyl transferase, group 1 YP_001777198.1 PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: bam:Bamb_3362 polysaccharide biosynthesis protein YP_001777199.1 KEGG: bur:Bcep18194_B2113 hypothetical protein YP_001777200.1 PFAM: acyltransferase 3; KEGG: bur:Bcep18194_B2114 acyltransferase 3 YP_001777201.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_B2115 GDP-mannose 4,6-dehydratase YP_001777202.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bur:Bcep18194_B2116 NAD-dependent epimerase/dehydratase YP_001777203.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: bxe:Bxe_A2660 putative reverse transcriptase-maturase-endonucleas YP_001777204.1 catalyzes the conversion of O-succinylhomoserine into homocysteine YP_001777205.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway YP_001777206.1 PFAM: Colicin V production protein; KEGG: bur:Bcep18194_B2119 colicin V production protein YP_001777207.1 PFAM: Sporulation domain protein; KEGG: bur:Bcep18194_B2120 hypothetical protein YP_001777208.1 TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; KEGG: bur:Bcep18194_B2121 folylpolyglutamate synthetase YP_001777209.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits YP_001777210.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis YP_001777211.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bur:Bcep18194_B2124 DNA methylase N-4/N-6 YP_001777212.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_001777213.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis YP_001777214.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability YP_001777215.1 KEGG: bur:Bcep18194_B2128 hypothetical protein YP_001777216.1 the hook connects flagellar basal body to the flagellar filament YP_001777217.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde YP_001777218.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis YP_001777219.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D YP_001777220.1 PFAM: Entericidin EcnAB; KEGG: bmu:Bmul_4629 entericidin EcnAB YP_001777221.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate YP_001777222.1 PFAM: alpha/beta hydrolase fold; KEGG: bbt:BBta_2211 putative hydrolase YP_001777223.1 PFAM: regulatory protein TetR; KEGG: vei:Veis_1032 transcriptional regulator, TetR family YP_001777224.1 PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_B2137 glutathione S-transferase-like YP_001777225.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B2141 amino acid transporter YP_001777226.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bur:Bcep18194_B2142 transcriptional regulator, AsnC family YP_001777227.1 PFAM: amidinotransferase; KEGG: bur:Bcep18194_B2143 dimethylargininase YP_001777228.1 PFAM: protein of unknown function DUF1479; KEGG: bur:Bcep18194_B2144 protein of unknown function DUF1479 YP_001777229.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bvi:Bcep1808_4417 glyoxalase/bleomycin resistance protein/dioxygenase YP_001777230.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B2146 transcriptional regulator, AraC family YP_001777231.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH YP_001777232.1 PFAM: protein of unknown function DUF339; KEGG: bur:Bcep18194_B2148 protein of unknown function DUF339 YP_001777233.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase YP_001777234.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_001777235.1 TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: bur:Bcep18194_B2151 succinate dehydrogenase, cytochrome b subunit YP_001777236.1 TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: bam:Bamb_3311 succinate dehydrogenase, cytochrome b subunit YP_001777237.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bur:Bcep18194_B2153 transcriptional regulator, GntR family YP_001777238.1 catalyzes the oxidation of malate to oxaloacetate YP_001777239.1 PFAM: HpcH/HpaI aldolase; KEGG: bur:Bcep18194_B2155 citrate lyase beta subunit-like YP_001777240.1 KEGG: bur:Bcep18194_B2156 hypothetical protein YP_001777241.1 functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C YP_001777242.1 catalyzes the conversion of citrate to isocitrate YP_001777243.1 PFAM: Domain of unknown function DUF1801; KEGG: bur:Bcep18194_B2159 hypothetical protein YP_001777244.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bur:Bcep18194_B2160 hypothetical protein YP_001777245.1 PFAM: regulatory protein ArsR; KEGG: bur:Bcep18194_B2161 transcriptional regulator, ArsR family YP_001777246.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Peptidase S53 propeptide; KEGG: bur:Bcep18194_B2163 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_001777247.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2166 major facilitator superfamily (MFS_1) transporter YP_001777248.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2167 ABC spermidine/putrescine transporter, inner membrane subunit YP_001777249.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2168 ABC spermidine/putrescine transporter, inner membrane subunit YP_001777250.1 PFAM: extracellular solute-binding protein family 1; KEGG: bur:Bcep18194_B2169 ABC spermidine/putrescine transporter, periplasmic ligand binding protein YP_001777251.1 KEGG: bur:Bcep18194_B2170 spermidine/putrescine ABC transporter ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_001777252.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bur:Bcep18194_B2171 transcriptional regulator, GntR family with aminotransferase activity YP_001777253.1 acts as a molecular chaperone to fold and export lipase A YP_001777254.1 PFAM: alpha/beta hydrolase fold; Protein of unknown function DUF676 hydrolase domain protein; PGAP1 family protein; KEGG: bam:Bamb_3293 triacylglycerol lipase YP_001777255.1 TIGRFAM: TonB-dependent copper receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bur:Bcep18194_B2174 TonB-dependent copper receptor YP_001777256.1 KEGG: bur:Bcep18194_B2175 hypothetical protein YP_001777257.1 PFAM: cytochrome B561; KEGG: bur:Bcep18194_B2176 cytochrome b561 YP_001777258.1 KEGG: bam:Bamb_3289 hypothetical protein YP_001777259.1 PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: bur:Bcep18194_B2178 peptidase M23B YP_001777260.1 KEGG: bur:Bcep18194_B2179 hypothetical protein YP_001777261.1 KEGG: bmu:Bmul_4675 hypothetical protein YP_001777262.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate YP_001777263.1 PFAM: protein of unknown function DUF938; Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_B2182 protein of unknown function DUF938 YP_001777264.1 Modulates the activities of several enzymes which are inactive in their acetylated form YP_001777265.1 PFAM: luciferase family protein; KEGG: bur:Bcep18194_B2188 flavin-dependent oxidoreductase YP_001777266.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bur:Bcep18194_B2189 MscS mechanosensitive ion channel YP_001777267.1 PFAM: regulatory protein TetR; Transcriptional regulator TetR; KEGG: bur:Bcep18194_B2190 transcriptional regulator, TetR family YP_001777268.1 PFAM: secretion protein HlyD family protein; KEGG: bur:Bcep18194_B2191 secretion protein, HlyD family YP_001777269.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2192 drug resistance transporter EmrB/QacA subfamily YP_001777270.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B2193 RND efflux system, outer membrane lipoprotein, NodT family YP_001777271.1 PFAM: Catalase domain protein; KEGG: bur:Bcep18194_B2194 catalase YP_001777272.1 PFAM: Ankyrin; KEGG: bur:Bcep18194_B2195 ankyrin repeat protein YP_001777273.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bmu:Bmul_4356 efflux transporter, RND family, MFP subunit YP_001777274.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bmu:Bmul_4357 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family YP_001777275.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_C6823 RND efflux system, outer membrane lipoprotein, NodT family YP_001777276.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_C6822 two component transcriptional regulator, winged helix family YP_001777277.1 KEGG: rpe:RPE_3323 periplasmic sensor signal transduction histidine kinase YP_001777278.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Peptidase S53 propeptide; KEGG: bur:Bcep18194_B2199 pseudomonalisin YP_001777279.1 KEGG: bur:Bcep18194_B2200 hypothetical protein YP_001777280.1 KEGG: bur:Bcep18194_B2201 flavin-nucleotide-binding protein YP_001777281.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bur:Bcep18194_B2202 transcriptional regulator, GntR family with aminotransferase activity YP_001777282.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: bur:Bcep18194_B2203 phospholipase D/transphosphatidylase YP_001777283.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria YP_001777284.1 synthesizes RNA primers at the replication forks YP_001777285.1 KEGG: bmu:Bmul_4815 GatB/YqeY domain protein YP_001777286.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_001777287.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B2208 hypothetical protein YP_001777288.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity YP_001777289.1 similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis YP_001777290.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate YP_001777291.1 PFAM: Polyprenyl synthetase; KEGG: bur:Bcep18194_B2212 polyprenyl synthetase YP_001777292.1 catalyzes the bidirectional exonucleolytic cleavage of DNA YP_001777293.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bvi:Bcep1808_4253 Rieske (2Fe-2S) domain protein YP_001777294.1 PFAM: Rhodanese domain protein; KEGG: bur:Bcep18194_B2215 3-mercaptopyruvate sulfurtransferase YP_001777295.1 PFAM: dienelactone hydrolase; KEGG: bmu:Bmul_4825 carboxymethylenebutenolidase YP_001777296.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bmu:Bmul_4826 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001777297.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair YP_001777298.1 PFAM: conserved hypothetical protein; KEGG: bur:Bcep18194_B2219 hypothetical protein YP_001777299.1 KEGG: bur:Bcep18194_B2220 hypothetical protein YP_001777300.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile YP_001777301.1 KEGG: bur:Bcep18194_B2228 hypothetical protein YP_001777302.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine YP_001777303.1 KEGG: bur:Bcep18194_B2230 hypothetical protein YP_001777304.1 PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_B2231 transcriptional regulator, MarR family YP_001777305.1 PFAM: OsmC family protein; KEGG: bam:Bamb_3232 OsmC family protein YP_001777306.1 KEGG: bvi:Bcep1808_4239 hypothetical protein YP_001777307.1 TIGRFAM: esterase, PHB depolymerase family; KEGG: bur:Bcep18194_B2234 esterase, PHB depolymerase YP_001777308.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: bur:Bcep18194_B2235 phosphoesterase, PA-phosphatase related YP_001777309.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bur:Bcep18194_B2236 molybdenum ABC transporter, periplasmic binding protein YP_001777310.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2237 molybdate ABC transporter, inner membrane subunit YP_001777311.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_B2238 ABC molybdate transporter, ATPase subunit YP_001777312.1 PFAM: regulatory protein LysR; TOBE domain protein; KEGG: bur:Bcep18194_B2239 transcriptional regulator, ModE family YP_001777313.1 PFAM: CHAD domain containing protein; KEGG: bur:Bcep18194_B2240 conserved hypothetical protein, CHAD family YP_001777314.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: bur:Bcep18194_B2241 4-oxalocrotonate tautomerase YP_001777315.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_4230 transcriptional regulator, LysR family YP_001777316.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bmu:Bmul_4892 protein of unknown function DUF6 transmembrane YP_001777317.1 PFAM: histidine kinase A domain protein; KEGG: bur:Bcep18194_B2244 histidine kinase YP_001777318.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: bur:Bcep18194_B2245 hypothetical protein YP_001777319.1 PFAM: thiamine monophosphate synthase; KEGG: bur:Bcep18194_B2246 thiamine monophosphate synthase YP_001777320.1 PFAM: glycoside hydrolase family 13 domain protein; KEGG: bur:Bcep18194_B2247 glycoside hydrolase, family 13-like YP_001777321.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_B2248 hypothetical protein YP_001777322.1 PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_B2249 glutathione S-transferase-like YP_001777323.1 PFAM: protein of unknown function DUF1345; KEGG: bur:Bcep18194_B2250 protein of unknown function DUF1345 YP_001777324.1 PFAM: metallophosphoesterase; KEGG: bur:Bcep18194_B2251 metallophosphoesterase YP_001777325.1 PFAM: RES domain protein; KEGG: bam:Bamb_5567 hypothetical protein YP_001777326.1 KEGG: bur:Bcep18194_B2253 hypothetical protein YP_001777327.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_B2254 ABC amino acid transporter, periplasmic ligand binding protein YP_001777328.1 PFAM: GtrA family protein; KEGG: bur:Bcep18194_B2257 GtrA-like protein YP_001777329.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bur:Bcep18194_B2258 sigma54 specific transcriptional regulator, fis family YP_001777330.1 KEGG: bur:Bcep18194_B2259 metal-dependent hydrolase-like YP_001777331.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: bur:Bcep18194_B2261 peptidylprolyl isomerase YP_001777332.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_5558 transcriptional regulator, AraC family YP_001777333.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A4257 GCN5-related N-acetyltransferase YP_001777334.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2263 major facilitator superfamily (MFS_1) transporter YP_001777335.1 PFAM: helix-turn-helix HxlR type; KEGG: bur:Bcep18194_B2265 putative transcriptional regulator YP_001777336.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2266 major facilitator superfamily (MFS_1) transporter YP_001777337.1 PFAM: glycosyl transferase group 1; KEGG: bur:Bcep18194_B2267 glycosyl transferase, group 1 YP_001777338.1 PFAM: glycosyl transferase group 1; KEGG: bur:Bcep18194_B2268 glycosyl transferase, group 1 YP_001777339.1 KEGG: bvi:Bcep1808_4208 hypothetical protein YP_001777340.1 KEGG: bam:Bamb_5552 glycosyltransferase-like protein YP_001777341.1 PFAM: glycosyl transferase family 2; KEGG: bam:Bamb_5551 glycosyl transferase, family 2 YP_001777342.1 KEGG: bur:Bcep18194_B2272 protein-tyrosine kinase; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein YP_001777343.1 PFAM: polysaccharide export protein; KEGG: bur:Bcep18194_B2273 polysaccharide export protein YP_001777344.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bur:Bcep18194_B2274 protein tyrosine phosphatase YP_001777345.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: bur:Bcep18194_B2275 UDP-glucose 6-dehydrogenase YP_001777346.1 TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: bam:Bamb_5546 sugar transferase YP_001777347.1 KEGG: bur:Bcep18194_B2277 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein YP_001777348.1 KEGG: bur:Bcep18194_B2278 hypothetical protein YP_001777349.1 KEGG: bur:Bcep18194_B2279 hypothetical protein YP_001777350.1 KEGG: bam:Bamb_5542 Fe-S oxidoreductase-like protein YP_001777351.1 PFAM: Rubrerythrin; KEGG: bmu:Bmul_4924 rubrerythrin YP_001777352.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bur:Bcep18194_B2282 putative sigma factor YP_001777353.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_B2283 glyoxalase/bleomycin resistance protein/dioxygenase YP_001777354.1 PFAM: DGPFAETKE family protein; KEGG: bur:Bcep18194_B2284 hypothetical protein YP_001777355.1 PFAM: DGPFAETKE family protein; KEGG: bur:Bcep18194_B2285 hypothetical protein YP_001777356.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bur:Bcep18194_B2286 endonuclease/exonuclease/phosphatase YP_001777357.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: bur:Bcep18194_B2287 protein of unknown function DUF883, ElaB YP_001777358.1 KEGG: bvi:Bcep1808_4191 hypothetical protein YP_001777359.1 PFAM: protein of unknown function UPF0118; KEGG: bam:Bamb_5533 protein of unknown function UPF0118 YP_001777360.1 KEGG: bur:Bcep18194_B2290 hypothetical protein YP_001777361.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_B2291 zinc-containing alcohol dehydrogenase superfamily YP_001777362.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B2292 short chain dehydrogenase YP_001777363.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: bur:Bcep18194_B2293 phosphoesterase, PA-phosphatase related YP_001777364.1 TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: bur:Bcep18194_B2294 manganese transport protein MntH YP_001777365.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_5527 transcriptional regulator, AraC family YP_001777366.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2296 transcriptional regulator, LysR family YP_001777367.1 PFAM: OsmC family protein; KEGG: bur:Bcep18194_B2297 OsmC-like protein YP_001777368.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: bur:Bcep18194_B2298 Dyp-type peroxidase YP_001777369.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_B2299 ABC efflux pump, fused ATPase and inner membrane subunits YP_001777370.1 PFAM: GCN5-related N-acetyltransferase; KEGG: reh:H16_B2397 acetyltransferase YP_001777371.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine YP_001777372.1 KEGG: bam:Bamb_5521 hypothetical protein YP_001777373.1 PFAM: Chloride channel core; KEGG: bur:Bcep18194_B2302 Cl-channel, voltage gated YP_001777374.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins YP_001777375.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: bur:Bcep18194_B2304 CheA signal transduction histidine kinase YP_001777376.1 PFAM: CheW domain protein; KEGG: bur:Bcep18194_B2305 CheW protein YP_001777377.1 PFAM: MCP methyltransferase CheR-type; Tetratricopeptide TPR_2 repeat protein; KEGG: bur:Bcep18194_B2306 MCP methyltransferase, CheR-type YP_001777378.1 PFAM: CheW domain protein; KEGG: bur:Bcep18194_B2307 CheW protein YP_001777379.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bur:Bcep18194_B2308 methyl-accepting chemotaxis sensory transducer YP_001777380.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_B2309 response regulator receiver sensor signal transduction histidine kinase YP_001777381.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: bur:Bcep18194_B2310 Na+/H+ antiporter YP_001777382.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B2311 aldehyde dehydrogenase YP_001777383.1 catalyzes the condensation of two pyruvates to form acetolactate, implicated in pH homeostasis via the acetoin-2,3-butanediol pathway or in valine biosynthesis YP_001777384.1 TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: bur:Bcep18194_B2313 protein of unknown function DUF891 YP_001777385.1 TIGRFAM: addiction module antidote protein; KEGG: bam:Bamb_5507 putative transcriptional regulator YP_001777386.1 PFAM: protein of unknown function DUF445; KEGG: bur:Bcep18194_B2315 protein of unknown function DUF445 YP_001777387.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B2322 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001777388.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bur:Bcep18194_B2323 Rieske (2Fe-2S) protein YP_001777389.1 PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: bam:Bamb_5503 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_001777390.1 PFAM: Rieske [2Fe-2S] domain protein; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: bam:Bamb_5502 Rieske (2Fe-2S) domain protein YP_001777391.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B2326 transcriptional regulator, AraC family YP_001777393.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rso:RS02364 putative methyl-accepting chemotaxis transducer transmembrane protein YP_001777394.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2327 transcriptional regulator, LysR family YP_001777395.1 KEGG: bur:Bcep18194_B2328 muconate cycloisomerase; TIGRFAM: muconate and chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing protein YP_001777396.1 TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: bam:Bamb_5498 catechol 1,2-dioxygenase YP_001777397.1 KEGG: bam:Bamb_5497 muconolactone delta-isomerase; TIGRFAM: muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase YP_001777398.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bam:Bamb_5496 NAD(P)H dehydrogenase (quinone) YP_001777399.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2333 transcriptional regulator, LysR family YP_001777400.1 KEGG: bur:Bcep18194_B2334 hypothetical protein YP_001777401.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: bur:Bcep18194_B2335 NADH/flavin oxidoreductase/NADH oxidase YP_001777402.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_5492 transcriptional regulator, AraC family YP_001777404.1 KEGG: bmu:Bmul_4968 hypothetical protein YP_001777405.1 PFAM: protein of unknown function DUF126; KEGG: bur:Bcep18194_B2339 protein of unknown function DUF126 YP_001777406.1 PFAM: protein of unknown function DUF521; KEGG: bur:Bcep18194_B2340 protein of unknown function DUF521 YP_001777407.1 PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_B2341 transcriptional regulator, MarR family YP_001777408.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2342 transcriptional regulator, LysR family YP_001777409.1 PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_B2343 hypothetical protein YP_001777410.1 PFAM: secretion protein HlyD family protein; KEGG: bur:Bcep18194_B2344 secretion protein, HlyD family YP_001777411.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2345 drug resistance transporter EmrB/QacA subfamily YP_001777412.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B2346 RND efflux system, outer membrane lipoprotein, NodT family YP_001777413.1 PFAM: transposase mutator type; KEGG: bte:BTH_II0431 transposase, mutator family YP_001777414.1 KEGG: bmu:Bmul_3620 hypothetical protein YP_001777415.1 KEGG: bmu:Bmul_5171 hypothetical protein YP_001777416.1 KEGG: bmu:Bmul_3916 hypothetical protein YP_001777417.1 KEGG: bur:Bcep18194_C7608 hypothetical protein YP_001777418.1 TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: bvi:Bcep1808_0451 rhs element Vgr protein YP_001777419.1 KEGG: bur:Bcep18194_B2348 glutathione S-transferase-like YP_001777420.1 KEGG: bur:Bcep18194_B2349 hypothetical protein YP_001777421.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmu:Bmul_4992 transcriptional regulator, LysR family YP_001777422.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2353 major facilitator superfamily (MFS_1) transporter YP_001777423.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bur:Bcep18194_B2354 amidohydrolase YP_001777424.1 KEGG: bvi:Bcep1808_5005 transposase, mutator type YP_001777425.1 KEGG: csa:Csal_2378 hypothetical protein YP_001777426.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bur:Bcep18194_B2357 methyl-accepting chemotaxis sensory transducer YP_001777427.1 PFAM: OmpA/MotB domain protein; KEGG: bur:Bcep18194_B2358 outer membrane protein, OmpA/MotB family YP_001777428.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bur:Bcep18194_B2359 MotA/TolQ/ExbB proton channel YP_001777429.1 PFAM: cyclic nucleotide-binding; KEGG: bur:Bcep18194_B2360 cyclic nucleotide-binding domain (cNMP-BD) protein YP_001777430.1 PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_B2364 glutathione S-transferase-like YP_001777431.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: bur:Bcep18194_B2365 polyhydroxyalkanoate depolymerase YP_001777432.1 KEGG: bur:Bcep18194_B2366 hypothetical protein YP_001777433.1 KEGG: bam:Bamb_5467 hypothetical protein YP_001777434.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_B2367 hypothetical protein YP_001777435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_B2375 ABC transporter, ATPase subunit YP_001777436.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_5465 polar amino acid ABC transporter, inner membrane subunit YP_001777437.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2377 ABC His/Glu/Gln/Arg/opine transporter, inner membrane subunit YP_001777438.1 KEGG: bur:Bcep18194_B2384 hypothetical protein YP_001777439.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B2385 outer membrane protein (porin) YP_001777440.1 TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bur:Bcep18194_B2386 transcriptional regulator, histidine utilization repressor, GntR family YP_001777441.1 PFAM: glycosyl transferase family 28; KEGG: bur:Bcep18194_B2387 glycosyl transferase, family 28 YP_001777442.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_B2388 transcriptional regulator, TetR family YP_001777443.1 KEGG: bur:Bcep18194_B2392 hypothetical protein YP_001777444.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B2393 alpha/beta hydrolase YP_001777445.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5457 transcriptional regulator, LysR family YP_001777446.1 KEGG: bur:Bcep18194_B2395 hypothetical protein YP_001777447.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B2396 amino acid transporter YP_001777448.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bur:Bcep18194_B2397 diguanylate cyclase (GGDEF domain) YP_001777449.1 KEGG: bur:Bcep18194_B2398 membrane protein YP_001777450.1 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis YP_001777451.1 KEGG: bur:Bcep18194_B2400 hypothetical protein YP_001777452.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_5441 major facilitator superfamily MFS_1 YP_001777453.1 KEGG: bam:Bamb_5440 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_001777454.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5439 transcriptional regulator, LysR family YP_001777455.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2402 transcriptional regulator, LysR family YP_001777456.1 KEGG: bur:Bcep18194_B2403 hypothetical protein YP_001777457.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_B2404 transcriptional regulator, AraC family YP_001777458.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B2405 lysine exporter family protein (LysE/YggA) YP_001777459.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_B2407 methylase involved in ubiquinone/menaquinone biosynthesis-like YP_001777460.1 KEGG: bur:Bcep18194_B2408 hypothetical protein YP_001777461.1 KEGG: bur:Bcep18194_B2409 hypothetical protein YP_001777462.1 PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: bur:Bcep18194_B2410 4-hydroxyphenylacetate 3-hydroxylase YP_001777463.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bur:Bcep18194_B2411 flavin reductase-like, FMN-binding YP_001777464.1 TIGRFAM: cysteine desulfurase IscS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bur:Bcep18194_B2412 cysteine desulfurase IscS YP_001777465.1 PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_B2413 transcriptional regulator, MarR family YP_001777466.1 KEGG: bur:Bcep18194_B2414 hypothetical protein YP_001777468.1 PFAM: sigma-54 factor interaction domain-containing protein; regulator of RNA terminal phosphate cyclase; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bam:Bamb_5434 regulator of RNA terminal phosphate cyclase YP_001777469.1 PFAM: band 7 protein; KEGG: bur:Bcep18194_B2416 band 7 protein YP_001777470.1 PFAM: protein of unknown function UPF0027; KEGG: bur:Bcep18194_B2417 hypothetical protein YP_001777471.1 KEGG: bur:Bcep18194_B2418 nucleotidyltransferase-like YP_001777472.1 PFAM: protein of unknown function DUF1176; KEGG: bur:Bcep18194_B2419 hypothetical protein YP_001777473.1 KEGG: bur:Bcep18194_B2420 hypothetical protein YP_001777474.1 KEGG: bur:Bcep18194_B2421 O-methyltransferase, family 3 YP_001777475.1 KEGG: bur:Bcep18194_B2422 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase YP_001777476.1 KEGG: bur:Bcep18194_B2423 hypothetical protein YP_001777477.1 KEGG: bmu:Bmul_6179 hypothetical protein YP_001777478.1 KEGG: bmu:Bmul_6178 hypothetical protein YP_001777479.1 PFAM: porin Gram-negative type; KEGG: bmu:Bmul_6177 porin gram-negative type YP_001777480.1 KEGG: bmu:Bmul_6176 hypothetical protein YP_001777481.1 KEGG: bur:Bcep18194_B2428 hypothetical protein YP_001777482.1 KEGG: bmu:Bmul_6174 heavy metal sensor signal transduction histidine kinase; TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_001777483.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bmu:Bmul_6173 two component heavy metal response transcriptional regulator, winged helix family YP_001777484.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: bmu:Bmul_6172 heavy metal efflux pump, CzcA family YP_001777485.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bmu:Bmul_6171 efflux transporter, RND family, MFP subunit YP_001777486.1 PFAM: outer membrane efflux protein; KEGG: bmu:Bmul_6170 outer membrane efflux protein YP_001777487.1 PFAM: aminoglycoside phosphotransferase; KEGG: bur:Bcep18194_B2434 aminoglycoside phosphotransferase YP_001777488.1 TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: bur:Bcep18194_B2435 nicotinamide mononucleotide transporter PnuC YP_001777489.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bur:Bcep18194_B2436 TonB-dependent siderophore receptor YP_001777490.1 KEGG: bur:Bcep18194_B2437 hypothetical protein YP_001777491.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bur:Bcep18194_B2438 oxidoreductase FAD/NAD(P)-binding YP_001777492.1 PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_B2439 glutathione S-transferase-like YP_001777493.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2440 transcriptional regulator, LysR family YP_001777495.1 KEGG: eca:ECA2199 putative lipoprotein YP_001777496.1 PFAM: regulatory protein TetR; KEGG: bam:Bamb_5414 transcriptional regulator, TetR family YP_001777497.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B2443 short-chain dehydrogenase/reductase SDR YP_001777498.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B2444 K+ transport flavoprotein YP_001777499.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B2445 alpha/beta hydrolase YP_001777500.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bur:Bcep18194_B2446 carboxymuconolactone decarboxylase YP_001777501.1 KEGG: bur:Bcep18194_B2447 lipoprotein YP_001777502.1 KEGG: bur:Bcep18194_B2448 hypothetical protein YP_001777503.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2449 drug resistance transporter Bcr/CflA subfamily YP_001777504.1 KEGG: bam:Bamb_5404 hypothetical protein YP_001777505.1 PFAM: NADPH-dependent FMN reductase; KEGG: bam:Bamb_5403 NADPH-dependent FMN reductase YP_001777506.1 KEGG: bam:Bamb_5402 hypothetical protein YP_001777507.1 PFAM: OmpA/MotB domain protein; KEGG: bur:Bcep18194_B2456 hypothetical protein YP_001777508.1 PFAM: protein of unknown function DUF802; KEGG: bmu:Bmul_5052 protein of unknown function DUF802 YP_001777509.1 KEGG: bur:Bcep18194_B2458 hypothetical protein YP_001777510.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B2460 lysine exporter family protein (LysE/YggA) YP_001777511.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B2461 GCN5-related N-acetyltransferase YP_001777512.1 KEGG: bur:Bcep18194_B2462 hypothetical protein YP_001777513.1 Enables the enzymatic reduction of mercuric ions to elemental mercury YP_001777514.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2464 transcriptional regulator, LysR family YP_001777515.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_B2465 zinc-containing alcohol dehydrogenase superfamily YP_001777516.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: bur:Bcep18194_B2466 NAD-dependent epimerase/dehydratase YP_001777517.1 SMART: helix-turn-helix domain protein; KEGG: bam:Bamb_5385 transcriptional regulator, XRE family YP_001777518.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: bxe:Bxe_A1589 RNA-directed DNA polymerase YP_001777519.1 KEGG: bur:Bcep18194_B2470 hypothetical protein YP_001777520.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B2471 GCN5-related N-acetyltransferase YP_001777521.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bam:Bamb_6258 transcriptional regulator, AraC family YP_001777522.1 PFAM: nuclear transport factor 2; KEGG: bam:Bamb_6259 hypothetical protein YP_001777523.1 PFAM: ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_C7236 ThiJ/PfpI family protein YP_001777524.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_C7235 short-chain dehydrogenase/reductase SDR YP_001777525.1 PFAM: beta-lactamase; KEGG: bur:Bcep18194_B2479 6-aminohexanoate-dimer hydrolase YP_001777526.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: bur:Bcep18194_B2480 transport-associated protein YP_001777527.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B2481 outer membrane protein (porin) YP_001777528.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2482 major facilitator superfamily (MFS_1) transporter YP_001777529.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_B2483 L-carnitine dehydratase/bile acid-inducible protein F YP_001777530.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_B2484 acyl-CoA dehydrogenase YP_001777531.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_B2485 AMP-dependent synthetase and ligase YP_001777532.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2486 transcriptional regulator, LysR family YP_001777533.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2487 major facilitator superfamily (MFS_1) transporter YP_001777534.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA YP_001777535.1 PFAM: NAD/NADP octopine/nopaline dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bur:Bcep18194_B2489 NAD-dependent glycerol-3-phosphate dehydrogenase-like YP_001777536.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B2490 transcriptional regulator, AraC family YP_001777537.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2491 transcriptional regulator, LysR family YP_001777538.1 PFAM: porin Gram-negative type; KEGG: bam:Bamb_5359 porin, gram-negative type YP_001777539.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_5358 major facilitator superfamily MFS_1 YP_001777540.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bam:Bamb_5357 ferredoxin YP_001777541.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2495 transcriptional regulator, LysR family YP_001777542.1 PFAM: Rieske [2Fe-2S] domain protein; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: bam:Bamb_5355 Rieske (2Fe-2S) domain protein YP_001777543.1 PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: bur:Bcep18194_B2497 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_001777544.1 TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: bmu:Bmul_5081 4-oxalocrotonate tautomerase family enzyme YP_001777545.1 KEGG: bur:Bcep18194_B2499 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001777546.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_B2500 acyl-CoA dehydrogenase-like YP_001777547.1 KEGG: bur:Bcep18194_B2501 hypothetical protein YP_001777548.1 KEGG: bur:Bcep18194_B2502 hypothetical protein YP_001777549.1 PFAM: Amidase; KEGG: bur:Bcep18194_B2503 amidase YP_001777550.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B2504 short-chain dehydrogenase/reductase SDR YP_001777551.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bur:Bcep18194_B2505 two component transcriptional regulator, LuxR family YP_001777552.1 TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, reductase subunit; PFAM: flavin reductase domain protein FMN-binding; KEGG: bur:Bcep18194_B2506 4-hydroxyphenylacetate 3-monooxygenase, reductase component YP_001777553.1 PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2507 hypothetical protein YP_001777554.1 PFAM: protein of unknown function DUF1234; KEGG: bur:Bcep18194_B2508 protein of unknown function DUF1234 YP_001777555.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bur:Bcep18194_B2509 transcriptional regulator, AsnC family YP_001777556.1 KEGG: bvi:Bcep1808_4067 hypothetical protein YP_001777557.1 KEGG: bur:Bcep18194_B2510 hypothetical protein YP_001777558.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B2511 GCN5-related N-acetyltransferase YP_001777559.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B2512 transcriptional regulator, AraC family YP_001777560.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bur:Bcep18194_B2513 glucose-methanol-choline oxidoreductase YP_001777561.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bur:Bcep18194_B2514 lipolytic enzyme YP_001777562.1 TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: bur:Bcep18194_B2516 protein of unknown function DUF891 YP_001777563.1 TIGRFAM: addiction module antidote protein; KEGG: bur:Bcep18194_B2517 putative transcriptional regulator YP_001777564.1 PFAM: SNARE associated Golgi protein; KEGG: bur:Bcep18194_B2518 DedA family membrane protein YP_001777565.1 KEGG: bur:Bcep18194_B2519 hypothetical protein YP_001777566.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bur:Bcep18194_B2520 two component transcriptional regulator, LuxR family YP_001777567.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: bur:Bcep18194_B2521 periplasmic sensor signal transduction histidine kinase YP_001777568.1 PFAM: plasmid stabilization system; KEGG: cph:Cpha266_1389 plasmid stabilization system YP_001777569.1 KEGG: bam:Bamb_5328 hypothetical protein YP_001777570.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_5327 major facilitator superfamily MFS_1 YP_001777571.1 KEGG: bur:Bcep18194_B2525 ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein YP_001777572.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_B2526 two component transcriptional regulator, winged helix family YP_001777573.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: bam:Bamb_5324 periplasmic sensor signal transduction histidine kinase YP_001777574.1 KEGG: bam:Bamb_5323 hypothetical protein YP_001777575.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_5320 ABC transporter related YP_001777576.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_5319 ABC transporter related YP_001777577.1 PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_B2534 ABC branched-chain amino acid family transporter, fused inner membrane subunits YP_001777578.1 PFAM: Extracellular ligand-binding receptor; KEGG: bur:Bcep18194_B2535 ABC branched chain amino acid family transporter, periplasmic ligand binding protein YP_001777579.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5316 transcriptional regulator, LysR family YP_001777580.1 PFAM: monooxygenase FAD-binding; KEGG: bam:Bamb_5315 FAD dependent oxidoreductase YP_001777581.1 KEGG: bur:Bcep18194_B2538 hypothetical protein YP_001777582.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: bur:Bcep18194_B2539 uncharacterized peroxidase YP_001777583.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bur:Bcep18194_B2541 transcriptional regulator, AsnC family YP_001777584.1 catalyzes the formation of L-proline from L-ornithine YP_001777585.1 KEGG: bur:Bcep18194_B2543 amidinotransferase YP_001777586.1 KEGG: bur:Bcep18194_B2544 molecular chaperone-like YP_001777587.1 KEGG: bur:Bcep18194_B2545 molecular chaperone-like YP_001777588.1 KEGG: bvi:Bcep1808_4044 hypothetical protein YP_001777589.1 PFAM: protein of unknown function UPF0074; KEGG: bur:Bcep18194_B2547 transcriptional regulator, BadM/Rrf2 family YP_001777590.1 PFAM: HI0933 family protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bam:Bamb_5305 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001777591.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2553 transcriptional regulator, LysR family YP_001777592.1 PFAM: alanine racemase domain protein; KEGG: bur:Bcep18194_B2554 alanine racemase-like YP_001777593.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: bur:Bcep18194_B2555 ornithine cyclodeaminase YP_001777594.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bur:Bcep18194_B2556 HAD-superfamily hydrolase, subfamily IA, variant 1 YP_001777595.1 PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_B2557 glutathione S-transferase-like YP_001777596.1 KEGG: bur:Bcep18194_B2558 hypothetical protein YP_001777597.1 PFAM: regulatory protein MarR; transcriptional regulator PadR family protein; KEGG: bur:Bcep18194_B2559 transcriptional regulator, MarR family YP_001777598.1 KEGG: bur:Bcep18194_B2560 PEP phosphonomutase YP_001777599.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_6337 transcriptional regulator, LysR family YP_001777600.1 PFAM: aldo/keto reductase; KEGG: bvi:Bcep1808_6440 aldo/keto reductase YP_001777601.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2563 major facilitator superfamily (MFS_1) transporter YP_001777602.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B2564 transcriptional regulator, AraC family YP_001777603.1 KEGG: bam:Bamb_5292 hypothetical protein YP_001777604.1 KEGG: bur:Bcep18194_B2566 hypothetical protein YP_001777606.1 regulator of pathogenicity factor RpfF; involved in synthesis of a diffusible signal factor involved in the regulation of extracellular enzymes YP_001777607.1 c-di-GMP phosphodiesterase; probably degrades signalling molecule c-di-GMP YP_001777608.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinase B/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: bur:Bcep18194_B2574 5-oxoprolinase (ATP-hydrolyzing) YP_001777609.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2575 major facilitator superfamily (MFS_1) transporter YP_001777610.1 PFAM: protein of unknown function DUF1445; KEGG: bur:Bcep18194_B2576 hypothetical protein YP_001777611.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2577 transcriptional regulator, LysR family YP_001777612.1 KEGG: bur:Bcep18194_B2578 hypothetical protein YP_001777613.1 KEGG: bur:Bcep18194_B2580 hypothetical protein YP_001777614.1 KEGG: bur:Bcep18194_B2581 hypothetical protein YP_001777615.1 PFAM: NLPA lipoprotein; KEGG: bur:Bcep18194_B2582 NlpA lipoprotein YP_001777616.1 PFAM: protein of unknown function DUF323; KEGG: bur:Bcep18194_B2583 protein of unknown function DUF323 YP_001777617.1 PFAM: sulfatase; KEGG: bur:Bcep18194_B2584 sulfatase YP_001777618.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B2585 short chain dehydrogenase YP_001777619.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2592 major facilitator superfamily (MFS_1) transporter YP_001777620.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_4027 transcriptional regulator, LysR family YP_001777621.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bvi:Bcep1808_4026 alcohol dehydrogenase, zinc-binding domain protein YP_001777622.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bur:Bcep18194_B2600 TonB-dependent receptor YP_001777623.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2601 major facilitator superfamily (MFS_1) transporter YP_001777624.1 KEGG: bur:Bcep18194_B2602 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein YP_001777625.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bur:Bcep18194_B2603 biopolymer transport protein ExbD/TolR YP_001777626.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bur:Bcep18194_B2604 MotA/TolQ/ExbB proton channel YP_001777627.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: bur:Bcep18194_B2605 TonB-like protein YP_001777628.1 KEGG: bur:Bcep18194_B2606 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein YP_001777629.1 PFAM: luciferase family protein; KEGG: bur:Bcep18194_B2607 alkanesulfonate monooxygenase YP_001777630.1 KEGG: bur:Bcep18194_B2608 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein YP_001777631.1 KEGG: bur:Bcep18194_B2609 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein YP_001777632.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2610 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit YP_001777633.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2611 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit YP_001777634.1 PFAM: sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bur:Bcep18194_B2612 sigma-54 specifc transcriptional regulator, fis family YP_001777635.1 PFAM: class II aldolase/adducin family protein; KEGG: bur:Bcep18194_B2613 class II aldolase/adducin-like YP_001777636.1 PFAM: secretory lipase; KEGG: bur:Bcep18194_B2614 secretory lipase YP_001777637.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring YP_001777638.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; the rhizobia and high GC gram-positive bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the R. leguminosarum protein in this cluster is transcribed under anaerobic conditions and is not necessary for growth YP_001777639.1 KEGG: bur:Bcep18194_B2617 lysine exporter family protein (LysE/YggA) YP_001777640.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bur:Bcep18194_B2620 putative PTS IIA-like nitrogen-regulatory protein PtsN YP_001777641.1 KEGG: bur:Bcep18194_B2621 acetylglutamate kinase-like YP_001777642.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; KEGG: bur:Bcep18194_B2622 cysteine desulphurases, SufS YP_001777643.1 KEGG: bur:Bcep18194_B2623 hypothetical protein YP_001777644.1 PFAM: helix-turn-helix domain protein; KEGG: bur:Bcep18194_B2624 transcriptional regulator, XRE family YP_001777645.1 KEGG: bur:Bcep18194_B2625 serine O-acetyltransferase YP_001777646.1 PFAM: Rhodanese domain protein; KEGG: bur:Bcep18194_B2626 rhodanese-like protein YP_001777647.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia YP_001777648.1 KEGG: bur:Bcep18194_B2628 hypothetical protein YP_001777649.1 KEGG: bur:Bcep18194_B2629 hypothetical protein YP_001777650.1 KEGG: bur:Bcep18194_B2630 hypothetical protein YP_001777651.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B2631 alpha/beta hydrolase YP_001777652.1 KEGG: dac:Daci_0285 hypothetical protein YP_001777653.1 KEGG: ppf:Pput_3075 hypothetical protein YP_001777654.1 TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative; KEGG: dac:Daci_0287 hydroxymethylglutaryl-CoA reductase, degradative YP_001777655.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: dac:Daci_0288 transcriptional regulator, GntR family with aminotransferase domain YP_001777656.1 PFAM: alpha/beta hydrolase fold; Epoxide hydrolase domain protein; KEGG: bur:Bcep18194_B2648 epoxide hydrolase-like YP_001777657.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B2649 short-chain dehydrogenase/reductase SDR YP_001777658.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2650 transcriptional regulator, LysR family YP_001777659.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bur:Bcep18194_B2652 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_001777660.1 KEGG: bur:Bcep18194_B2653 hypothetical protein YP_001777661.1 PFAM: aminotransferase class I and II; KEGG: bur:Bcep18194_B2654 aminotransferase, class I and II YP_001777662.1 PFAM: alpha/beta hydrolase fold; KEGG: mgr:MGG_05826 hypothetical protein YP_001777663.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bte:BTH_I2838 hypothetical protein YP_001777664.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bja:bll7244 transcriptional regulatory protein YP_001777665.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xcb:XC_0341 AttT protein YP_001777666.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_C7262 GCN5-related N-acetyltransferase YP_001777667.1 catalyzes the oxidative decarboxylation of malate to form pyruvate YP_001777668.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2663 transcriptional regulator, LysR family YP_001777669.1 KEGG: bur:Bcep18194_B2664 hypothetical protein YP_001777670.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mmw:Mmwyl1_2320 transcriptional regulator, GntR family YP_001777671.1 PFAM: Extracellular ligand-binding receptor; KEGG: bpd:BURPS668_3831 putative amino acid ABC transporter, periplasmic amino acid-binding protein YP_001777672.1 KEGG: bur:Bcep18194_C7693 hypothetical protein YP_001777673.1 TIGRFAM: chlorinating enzyme; PFAM: Phytanoyl-CoA dioxygenase; KEGG: pap:PSPA7_2124 CmaB YP_001777674.1 KEGG: pap:PSPA7_2123 hypothetical protein YP_001777675.1 PFAM: Thioesterase; KEGG: pap:PSPA7_2122 linear gramicidin dehydrogenase LgrE YP_001777676.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; KEGG: pap:PSPA7_2121 linear gramicidin synthetase subunit C YP_001777677.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: pap:PSPA7_2120 YbaK/prolyl-tRNA synthetase associated region YP_001777678.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pap:PSPA7_2119 acyl-CoA dehydrogenase domain protein YP_001777679.1 PFAM: sodium/hydrogen exchanger; KEGG: pfl:PFL_3608 sodium/hyrdogen antiporter, putative YP_001777680.1 PFAM: Glutathione S-transferase domain; KEGG: bvi:Bcep1808_4679 glutathione S-transferase, N-terminal domain YP_001777681.1 PFAM: regulatory protein TetR; KEGG: bvi:Bcep1808_4678 transcriptional regulator, TetR family YP_001777682.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B2666 GCN5-related N-acetyltransferase YP_001777683.1 PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: sth:STH2906 molybdenum cofactor biosynthesis protein YP_001777684.1 KEGG: reu:Reut_A0383 hypothetical protein YP_001777685.1 PFAM: aminotransferase class V; KEGG: bur:Bcep18194_B2675 aminotransferase, class V YP_001777686.1 PFAM: beta-lactamase; KEGG: bur:Bcep18194_B2676 beta-lactamase YP_001777687.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B2677 FAD dependent oxidoreductase YP_001777688.1 PFAM: Extracellular ligand-binding receptor; KEGG: bur:Bcep18194_B2678 ABC branched chain amino acid family transporter, periplasmic ligand binding protein YP_001777689.1 PFAM: CsbD family protein; KEGG: bur:Bcep18194_B2679 conserved hypothetical protein, CsbD-like YP_001777690.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bmu:Bmul_5809 transposase IS116/IS110/IS902 family protein YP_001777691.1 KEGG: bur:Bcep18194_B2680 transcriptional regulator, LuxR family; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001777692.1 KEGG: bam:Bamb_5245 hypothetical protein YP_001777693.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: bmu:Bmul_5156 transport-associated protein YP_001777694.1 PFAM: CsbD family protein; KEGG: bam:Bamb_5243 CsbD family protein YP_001777695.1 KEGG: bur:Bcep18194_B2689 hypothetical protein YP_001777696.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5241 transcriptional regulator, LysR family YP_001777697.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rso:RS02469 probable ferrisiderophore receptor protein YP_001777698.1 KEGG: bur:Bcep18194_B2691 hypothetical protein YP_001777699.1 PFAM: Ankyrin; KEGG: bur:Bcep18194_B2692 ankyrin YP_001777700.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B2693 aldehyde dehydrogenase YP_001777701.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B2697 lysine exporter family protein (LysE/YggA) YP_001777702.1 KEGG: bur:Bcep18194_B2698 hypothetical protein YP_001777703.1 KEGG: bur:Bcep18194_B2701 hypothetical protein YP_001777704.1 PFAM: Propeptide PepSY amd peptidase M4; PepSY-associated TM helix domain protein; KEGG: bur:Bcep18194_B2702 propeptide, PepSY amd peptidase M4 YP_001777705.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bur:Bcep18194_B2705 TonB-dependent siderophore receptor YP_001777706.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bur:Bcep18194_B2709 NADH-flavin oxidoreductase/NADH oxidase YP_001777707.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bur:Bcep18194_B2710 transcriptional regulator, MerR family YP_001777708.1 PFAM: protein of unknown function DUF1330; KEGG: bur:Bcep18194_B2715 protein of unknown function DUF1330 YP_001777709.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: bur:Bcep18194_B2716 NAD-dependent epimerase/dehydratase YP_001777710.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_B2717 transcriptional regulator, LacI family YP_001777711.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2718 major facilitator superfamily (MFS_1) transporter YP_001777712.1 PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; AlkA domain protein; KEGG: bur:Bcep18194_B2719 transcriptional regulator, AraC family YP_001777713.1 KEGG: bur:Bcep18194_B2720 methylated-DNA--(protein)-cysteine S-methyltransferase; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding YP_001777714.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_5230 transcriptional regulator, AraC family YP_001777715.1 KEGG: bam:Bamb_5229 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase YP_001777716.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bur:Bcep18194_B2723 transcriptional regulator, AsnC family YP_001777717.1 TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: bur:Bcep18194_B2724 glucosamine-fructose-6-phosphate aminotransferase, isomerising YP_001777718.1 KEGG: lpf:lpl2497 hypothetical protein YP_001777720.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_B2731 periplasmic sensor signal transduction histidine kinase YP_001777721.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_B2732 two component transcriptional regulator, winged helix family YP_001777722.1 PFAM: MltA-interacting MipA family protein; KEGG: bur:Bcep18194_B2733 outer membrane protein YP_001777723.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B2734 outer membrane protein (porin) YP_001777724.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bur:Bcep18194_B2735 Rieske (2Fe-2S) protein YP_001777725.1 PFAM: YCII-related; KEGG: bmu:Bmul_6069 YCII-related protein YP_001777726.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bmu:Bmul_6071 iron-containing alcohol dehydrogenase YP_001777727.1 PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_5214 betaine-aldehyde dehydrogenase YP_001777728.1 KEGG: bur:Bcep18194_B2739 hypothetical protein YP_001777729.1 KEGG: bur:Bcep18194_B2740 hypothetical protein YP_001777730.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5211 transcriptional regulator, LysR family YP_001777731.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2742 major facilitator superfamily (MFS_1) transporter YP_001777732.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; protein of unknown function DUF442; KEGG: bur:Bcep18194_B2744 hypothetical protein YP_001777733.1 SMART: helix-turn-helix domain protein; KEGG: bja:bll4873 hypothetical protein YP_001777734.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bja:blr4874 putative alcohol dehydrogenase YP_001777735.1 PFAM: ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_B2746 ThiJ/PfpI family protein YP_001777736.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_B2747 transcriptional regulator, AraC family YP_001777737.1 KEGG: bam:Bamb_5196 hypothetical protein YP_001777738.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: bur:Bcep18194_B2759 peptidase S10, serine carboxypeptidase YP_001777739.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bur:Bcep18194_B2760 endonuclease/exonuclease/phosphatase YP_001777740.1 PFAM: copper resistance D domain protein; KEGG: bur:Bcep18194_B2761 copper resistance protein D YP_001777741.1 PFAM: copper resistance protein CopC; KEGG: bur:Bcep18194_B2762 copper resistance protein CopC YP_001777742.1 KEGG: bam:Bamb_5191 hypothetical protein YP_001777743.1 PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: bam:Bamb_5190 multicopper oxidase, type 2; multicopper oxidase, type 3 YP_001777744.1 PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B2765 outer membrane efflux protein YP_001777745.1 KEGG: bur:Bcep18194_B2766 hypothetical protein YP_001777746.1 KEGG: bam:Bamb_5187 hypothetical protein YP_001777747.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_B2768 two component heavy metal response transcriptional regulator, winged helix family YP_001777748.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_B2769 heavy metal sensor signal transduction histidine kinase YP_001777749.1 PFAM: major facilitator superfamily MFS_1; KEGG: rme:Rmet_5351 major facilitator superfamily MFS_1 YP_001777750.1 PFAM: protein of unknown function DUF1289; KEGG: bvi:Bcep1808_3873 protein of unknown function DUF1289 YP_001777751.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bmu:Bmul_5279 cation diffusion facilitator family transporter YP_001777752.1 PFAM: protein of unknown function DUF156; KEGG: bpd:BURPS668_A2846 protein containing YP_001777753.1 PFAM: sodium/calcium exchanger membrane region; KEGG: bur:Bcep18194_B2770 sodium/calcium exchanger membrane region YP_001777754.1 KEGG: bam:Bamb_5183 efflux transporter, RND family, MFP subunit YP_001777755.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: bam:Bamb_5182 heavy metal efflux pump, CzcA family YP_001777756.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: bam:Bamb_5181 efflux transporter, RND family, MFP subunit YP_001777757.1 PFAM: outer membrane efflux protein; KEGG: bmu:Bmul_6284 outer membrane efflux protein YP_001777758.1 KEGG: bam:Bamb_5179 hypothetical protein YP_001777759.1 PFAM: Glutathione S-transferase domain; KEGG: bam:Bamb_5178 glutathione S-transferase, C-terminal domain YP_001777760.1 PFAM: helix-turn-helix HxlR type; KEGG: bur:Bcep18194_B2772 putative transcriptional regulator YP_001777761.1 KEGG: bur:Bcep18194_B2773 hypothetical protein YP_001777762.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2776 major facilitator superfamily (MFS_1) transporter YP_001777763.1 PFAM: regulatory protein LuxR; KEGG: bur:Bcep18194_B2786 transcriptional regulator, LuxR family YP_001777764.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_5170 GCN5-related N-acetyltransferase YP_001777765.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_B2805 trans-aconitate 2-methyltransferase YP_001777766.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5168 transcriptional regulator, LysR family YP_001777767.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_5167 GCN5-related N-acetyltransferase YP_001777768.1 catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide YP_001777769.1 PFAM: carbonic anhydrase; KEGG: bur:Bcep18194_B2816 carbonate dehydratase YP_001777770.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: bam:Bamb_6181 transposase, IS605 OrfB family YP_001777771.1 controls the expression of the cynTSX operon involved in degrading and using cyanate as a sole nitrogen source YP_001777772.1 KEGG: bur:Bcep18194_B2818 hypothetical protein YP_001777773.1 KEGG: bur:Bcep18194_B2819 hypothetical protein YP_001777774.1 KEGG: bur:Bcep18194_B2820 uncharacterized membrane-anchored protein YP_001777775.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2821 transcriptional regulator, LysR family YP_001777776.1 KEGG: bam:Bamb_5161 hypothetical protein YP_001777777.1 KEGG: bur:Bcep18194_B2823 hypothetical protein YP_001777778.1 PFAM: penicillin-binding protein transpeptidase; KEGG: bur:Bcep18194_B2849 beta-lactamase YP_001777779.1 PFAM: acyltransferase 3; KEGG: bam:Bamb_5160 acyltransferase 3 YP_001777780.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; SMART: ribosomal RNA adenine methylase transferase; KEGG: bur:Bcep18194_B2854 phospholipid N-methyltransferase-like YP_001777781.1 catalyzes the formation of acetate from pyruvate YP_001777782.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bam:Bamb_5156 transcriptional regulator, AsnC family YP_001777783.1 catalyzes conversion of 1-aminocyclopropane-1-carboxylate to ammonia and alpha-ketobutyrate YP_001777784.1 KEGG: bur:Bcep18194_B2883 hypothetical protein YP_001777785.1 KEGG: bur:Bcep18194_B2884 hypothetical protein YP_001777786.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: bur:Bcep18194_B2885 hypothetical protein YP_001777787.1 PFAM: response regulator receiver; BetR domain protein; KEGG: bur:Bcep18194_B2886 response regulator receiver domain protein (CheY-like) YP_001777788.1 PFAM: oxidoreductase molybdopterin binding; KEGG: bur:Bcep18194_B2887 hypothetical protein YP_001777789.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_B2888 periplasmic sensor hybrid histidine kinase YP_001777790.1 PFAM: protein of unknown function UPF0047; KEGG: bur:Bcep18194_B2889 hypothetical protein YP_001777791.1 KEGG: bur:Bcep18194_B2890 hypothetical protein YP_001777792.1 KEGG: bur:Bcep18194_B2891 hypothetical protein YP_001777793.1 KEGG: bur:Bcep18194_B2892 major facilitator superfamily (MFS_1) transporter YP_001777794.1 KEGG: bur:Bcep18194_B2893 hypothetical protein YP_001777795.1 KEGG: bur:Bcep18194_B2894 hypothetical protein YP_001777796.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B2895 lysine exporter family protein (LysE/YggA) YP_001777797.1 PFAM: protein of unknown function DUF891; KEGG: amr:AM1_6214 phage derived protein GP49-like protein (DUF891) YP_001777798.1 PFAM: helix-turn-helix domain protein; KEGG: bam:Bamb_5139 transcriptional regulator, XRE family YP_001777799.1 KEGG: bur:Bcep18194_B2898 hypothetical protein YP_001777800.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bur:Bcep18194_B2899 transcriptional regulator, AsnC family YP_001777801.1 PFAM: AzlC family protein; KEGG: bur:Bcep18194_B2900 branched-chain amino acid efflux pump, AzlC family YP_001777802.1 PFAM: branched-chain amino acid transport; KEGG: bur:Bcep18194_B2901 protein of unknown function DUF931 YP_001777803.1 KEGG: bur:Bcep18194_B2902 acid phosphatase; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE YP_001777804.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B2903 short-chain dehydrogenase/reductase SDR YP_001777805.1 PFAM: PilT protein domain protein; KEGG: vei:Veis_2285 PilT protein-like protein YP_001777806.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: pna:Pnap_4887 transcriptional regulator, AbrB family YP_001777807.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: bur:Bcep18194_B2906 alpha-1,2-mannosidase, putative YP_001777808.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: bur:Bcep18194_B2907 alpha-1,2-mannosidase, putative YP_001777810.1 PFAM: Cupin domain protein; Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_B2908 hypothetical protein YP_001777811.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide YP_001777812.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2910 transcriptional regulator, LysR family YP_001777813.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: bur:Bcep18194_B2911 pyridoxal-dependent decarboxylase YP_001777814.1 SMART: regulatory protein ArsR; KEGG: bur:Bcep18194_B2912 transcriptional regulator, ArsR family YP_001777815.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2913 transcriptional regulator, LysR family YP_001777816.1 PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_B2914 aldo/keto reductase YP_001777817.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bja:bll8295 probable ATP-binding protein YP_001777818.1 KEGG: bur:Bcep18194_B2917 GCN5-related N-acetyltransferase YP_001777819.1 SMART: helix-turn-helix domain protein; KEGG: bps:BPSL0141 putative phage DNA-binding protein YP_001777822.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_B2918 methylase involved in ubiquinone/menaquinone biosynthesis-like YP_001777823.1 PFAM: PilT protein domain protein; KEGG: reh:H16_A3381 plasmid stability protein StbB YP_001777824.1 TIGRFAM: prevent-host-death family protein; KEGG: reh:H16_A3382 antitoxin of toxin-antitoxin stability system YP_001777825.1 KEGG: bur:Bcep18194_B2919 hypothetical protein YP_001777826.1 KEGG: bam:Bamb_5121 hypothetical protein YP_001777827.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: bvi:Bcep1808_3911 redoxin domain protein YP_001777828.1 KEGG: bur:Bcep18194_B2923 (acyl-carrier protein) phosphodiesterase YP_001777829.1 KEGG: bxe:Bxe_C0462 putative DNA relaxase/nickase, TraS/VirD2-like YP_001777830.1 KEGG: bxe:Bxe_A1767 plasmid-related protein YP_001777831.1 KEGG: bvi:Bcep1808_5795 putative DNA primase, DNA transfer TraO-like protein YP_001777832.1 PFAM: Primase 2; KEGG: bxe:Bxe_C0459 putative DNA replication primase YP_001777833.1 PFAM: TRAG family protein; KEGG: bxe:Bxe_C0458 putative type IV secretory pathway protein VirD4 YP_001777834.1 KEGG: bxe:Bxe_C0457 hypothetical protein YP_001777835.1 TIGRFAM: P-type DNA transfer ATPase VirB11; PFAM: type II secretion system protein E; KEGG: bxe:Bxe_A1762 putative type IV secretion system protein VirB11 YP_001777836.1 PFAM: conjugation TrbI family protein; KEGG: bxe:Bxe_A2650 putative type IV secretion system protein VirB10 YP_001777837.1 PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: bxe:Bxe_C0454 putative type IV secretion system protein VirB9 YP_001777838.1 PFAM: VirB8 family protein; KEGG: bxe:Bxe_C0453 putative type IV secretion system protein VirB8/TraJ YP_001777839.1 TIGRFAM: P-type DNA transfer protein VirB5; PFAM: type IV secretion system family protein; KEGG: bxe:Bxe_C0452 putative type IV secretion system protein VirB5/TraF YP_001777840.1 PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: bxe:Bxe_C0451 putative type IV secretion system protein VirB6/TraH YP_001777841.1 TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; PFAM: CagE TrbE VirB component of type IV transporter system; KEGG: bxe:Bxe_C0450 putative type IV secretion system protein VirB4/TraE YP_001777842.1 PFAM: type IV secretory pathway VirB3 family protein; KEGG: bvi:Bcep1808_5784 type IV secretory pathway, VirB3 family protein YP_001777843.1 PFAM: Conjugal transfer protein TrbC; KEGG: bxe:Bxe_A2657 putative type IV secretion system protein VirB2/TraC YP_001777844.1 PFAM: Lytic transglycosylase catalytic; KEGG: bxe:Bxe_C0447 putative type IV secretion system protein VirB1 YP_001777845.1 PFAM: transposase IS3/IS911 family protein; KEGG: bxe:Bxe_A1736 transposase and inactivated derivatives YP_001777846.1 PFAM: Integrase catalytic region; KEGG: msm:MSMEG_2675 ISMsm8, transposase YP_001777847.1 PFAM: isochorismatase hydrolase; KEGG: dac:Daci_4549 isochorismatase hydrolase YP_001777848.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dac:Daci_4548 transcriptional regulator, LysR family YP_001777849.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bur:Bcep18194_B2921 thiol-disulfide isomerase/thioredoxin-like YP_001777850.1 PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: reh:H16_A3095 ion transport protein, VIC superfamily YP_001777851.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bur:Bcep18194_B1320 multiple antibiotic resistance (MarC)-related proteins YP_001777852.1 TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: bam:Bamb_5598 NADPH-dependent FMN reductase YP_001777853.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: bmu:Bmul_6163 arsenical-resistance protein YP_001777854.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bmu:Bmul_6164 protein tyrosine phosphatase YP_001777855.1 PFAM: regulatory protein ArsR; KEGG: bmu:Bmul_6167 transcriptional regulator, ArsR family YP_001777856.1 KEGG: mmu:100039562 similar to ZK84.1 YP_001777857.1 PFAM: porin opacity type; KEGG: dac:Daci_3966 opacity protein and related surface antigens-like protein YP_001777858.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: dac:Daci_1204 two component transcriptional regulator, LuxR family YP_001777859.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_4100 periplasmic sensor signal transduction histidine kinase YP_001777860.1 PFAM: transcriptional regulator domain protein; KEGG: ccr:CC_3325 DNA-binding response regulator YP_001777861.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: bmu:Bmul_5216 integral membrane sensor hybrid histidine kinase YP_001777862.1 PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: xac:XAC3546 outer membrane protein YP_001777863.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bpd:BURPS668_A0187 regulatory protein, LuxR:response regulator receiver YP_001777864.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bte:BTH_II0142 DNA-binding response regulator YP_001777865.1 PFAM: OmpA/MotB domain protein; KEGG: bam:Bamb_3151 OmpA/MotB domain protein YP_001777866.1 PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bam:Bamb_3152 YadA C-terminal domain protein YP_001777867.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: bpd:BURPS668_A0180 response regulator/sensor histidine kinase YP_001777868.1 PFAM: glycosyl transferase family 25; KEGG: cch:Cag_0745 glycosyl transferase, family 25 YP_001777869.1 KEGG: bur:Bcep18194_C7087 hypothetical protein YP_001777870.1 KEGG: bvi:Bcep1808_2801 tetratricopeptide TPR_2 repeat protein YP_001777871.1 KEGG: cph:Cpha266_1839 hypothetical protein YP_001777872.1 PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_B2944 NUDIX hydrolase YP_001777873.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bxe:Bxe_B0154 putative PpiC-type peptidyl-prolyl cis-trans isomerase YP_001777874.1 PFAM: carbonic anhydrase; KEGG: reh:H16_B2403 periplasmic alpha-carbonic anhydrase YP_001777875.1 PFAM: Integrase catalytic region; KEGG: bvi:Bcep1808_4294 integrase, catalytic region YP_001777876.1 PFAM: transposase IS3/IS911 family protein; KEGG: nmu:Nmul_A2011 transposase IS3/IS911 YP_001777877.1 PFAM: Catalase domain protein; KEGG: bpd:BURPS668_A1461 catalase YP_001777878.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B0581 amino acid transporter YP_001777879.1 TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: bam:Bamb_5119 sugar transferase YP_001777880.1 PFAM: polysaccharide export protein; KEGG: bur:Bcep18194_B2864 polysaccharide export protein YP_001777881.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bte:BTH_I1353 low molecular weight protein-tyrosine-phosphatase YP_001777882.1 KEGG: bur:Bcep18194_B2866 exopolysaccharide transport protein; TIGRFAM: exopolysaccharide transport protein family; capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein YP_001777883.1 PFAM: glycosyl transferase group 1; KEGG: bur:Bcep18194_B2867 glycosyl transferase, group 1 YP_001777884.1 KEGG: bur:Bcep18194_B2868 hypothetical protein YP_001777885.1 PFAM: polysaccharide biosynthesis protein; KEGG: bur:Bcep18194_B2869 hypothetical protein YP_001777886.1 KEGG: bur:Bcep18194_B2870 hypothetical protein YP_001777887.1 KEGG: pfo:Pfl_3846 hypothetical protein YP_001777888.1 PFAM: protein of unknown function DUF1504; KEGG: mpt:Mpe_A0367 hypothetical protein YP_001777889.1 TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: bur:Bcep18194_B2932 2-isopropylmalate synthase YP_001777890.1 PFAM: Integrase catalytic region; KEGG: bte:BTH_II0366 transposase YP_001777891.1 PFAM: transposase IS3/IS911 family protein; KEGG: rso:RSp0461 ISRSO10-transposase orfA protein YP_001777892.1 PFAM: transposase IS3/IS911 family protein; KEGG: rso:RSc2314 probable transposase protein YP_001777893.1 PFAM: Integrase catalytic region; KEGG: msm:MSMEG_2675 ISMsm8, transposase YP_001777894.1 KEGG: gur:Gura_0037 prevent-host-death family protein YP_001777895.1 PFAM: PilT protein domain protein; KEGG: gur:Gura_0038 PilT protein domain protein YP_001777896.1 PFAM: porin Gram-negative type; KEGG: bvi:Bcep1808_5776 porin, gram-negative type YP_001777897.1 KEGG: bvi:Bcep1808_5775 protein of unknown function DUF1185 YP_001777898.1 PFAM: Amidase; KEGG: bvi:Bcep1808_5774 amidase YP_001777899.1 KEGG: bvi:Bcep1808_5773 ABC branched chain amino acid family transporter, periplasmic ligand binding protein YP_001777900.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_5772 ABC transporter related YP_001777901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_5771 ABC transporter related YP_001777902.1 PFAM: inner-membrane translocator; KEGG: bvi:Bcep1808_5770 inner-membrane translocator YP_001777903.1 PFAM: inner-membrane translocator; KEGG: bvi:Bcep1808_5769 inner-membrane translocator YP_001777904.1 PFAM: helix-turn-helix domain protein; KEGG: bxe:Bxe_C0429 transcriptional regulator, XRE family YP_001777905.1 PFAM: helix-turn-helix domain protein; KEGG: bxe:Bxe_C0429 transcriptional regulator, XRE family YP_001777906.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_C0427 transcriptional regulator, GntR family YP_001777907.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bvi:Bcep1808_5764 acyl-CoA dehydrogenase domain protein YP_001777908.1 PFAM: phosphopantetheine-binding; KEGG: bvi:Bcep1808_5763 phosphopantetheine-binding YP_001777909.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: bvi:Bcep1808_5762 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III C terminal domain protein YP_001777910.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: bvi:Bcep1808_5761 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III C terminal domain protein YP_001777911.1 TIGRFAM: acyl-CoA ligase (AMP-forming), exosortase system type 1 associated; PFAM: AMP-dependent synthetase and ligase; KEGG: bvi:Bcep1808_5760 AMP-dependent synthetase and ligase YP_001777912.1 TIGRFAM: pyridoxal-dependent decarboxylase, exosortase system type 1 associated; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: bvi:Bcep1808_5759 Orn/DAP/Arg decarboxylase 2 YP_001777913.1 KEGG: bvi:Bcep1808_5758 acyl-CoA dehydrogenase domain protein YP_001777914.1 KEGG: bxe:Bxe_C0419 hypothetical protein YP_001777915.1 KEGG: bvi:Bcep1808_5756 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III C terminal domain protein YP_001777916.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: bxe:Bxe_C0417 hypothetical protein YP_001777917.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: bvi:Bcep1808_5754 response regulator receiver protein YP_001777918.1 PFAM: autoinducer synthesis protein; KEGG: bxe:Bxe_C0415 putative autoinducer synthesis protein YP_001777919.1 KEGG: bvi:Bcep1808_5751 hypothetical protein YP_001777920.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bpd:BURPS668_A0098 H-NS histone family protein YP_001777921.1 PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: reu:Reut_A2791 ion transport protein YP_001777922.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2927 drug resistance transporter EmrB/QacA subfamily YP_001777923.1 PFAM: secretion protein HlyD family protein; KEGG: bur:Bcep18194_B2928 secretion protein, HlyD family YP_001777924.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B2929 RND efflux system, outer membrane lipoprotein, NodT family YP_001777925.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_B2930 transcriptional regulator, AraC family YP_001777926.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2931 transcriptional regulator, LysR family YP_001777927.1 KEGG: pap:PSPA7_2108 hypothetical protein YP_001777928.1 TIGRFAM: amino acid adenylation domain protein; thioester reductase domain protein; PFAM: AMP-dependent synthetase and ligase; NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; phosphopantetheine-binding; Male sterility domain; KEGG: pap:PSPA7_2109 nonribosomal peptide synthetase YP_001777929.1 KEGG: pen:PSEEN0133 hypothetical protein YP_001777930.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: pap:PSPA7_2111 cupin 2, conserved barrel domain protein YP_001777931.1 KEGG: pap:PSPA7_2112 hypothetical protein YP_001777932.1 PFAM: condensation domain protein; KEGG: bbt:BBta_4110 putative non-ribosomal peptide synthase YP_001777933.1 PFAM: aminotransferase class-III; KEGG: bmu:Bmul_3821 aminotransferase class-III YP_001777934.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pfl:PFL_4124 transcriptional regulator, AraC family YP_001777935.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: bvi:Bcep1808_6456 autoinducer-binding domain protein YP_001777936.1 TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: bur:Bcep18194_B2932 2-isopropylmalate synthase YP_001777937.1 PFAM: Fucose-binding lectin II; KEGG: bur:Bcep18194_B2933 hypothetical protein YP_001777938.1 PFAM: Fucose-binding lectin II; KEGG: bur:Bcep18194_B2934 hypothetical protein YP_001777939.1 PFAM: Fucose-binding lectin II; KEGG: bur:Bcep18194_B2935 hypothetical protein YP_001777940.1 PFAM: amine oxidase; KEGG: pap:PSPA7_3191 tryptophan 2-monooxygenase YP_001777941.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bmu:Bmul_5018 permease for cytosine/purines uracil thiamine allantoin YP_001777942.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bmu:Bmul_5017 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001777943.1 TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Pertactin; Autotransporter beta- domain protein; KEGG: bur:Bcep18194_B2939 outer membrane autotransporter barrel YP_001777944.1 PFAM: peptidase M23B; KEGG: bur:Bcep18194_B2941 peptidase M23B YP_001777945.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bur:Bcep18194_B2942 MscS mechanosensitive ion channel YP_001777946.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate YP_001777947.1 KEGG: bmu:Bmul_5239 hypothetical protein YP_001777948.1 exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA YP_001777949.1 KEGG: bur:Bcep18194_B2974 ABC phosphate/phosphonate transporter, periplasmic ligand binding protein YP_001777950.1 PFAM: fatty acid desaturase; KEGG: bur:Bcep18194_B2975 fatty acid desaturase YP_001777951.1 TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: bam:Bamb_5095 benzoate transporter YP_001777952.1 KEGG: bur:Bcep18194_B2980 NmrA-like protein YP_001777953.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B2981 transcriptional regulator, AraC family YP_001777954.1 KEGG: bur:Bcep18194_B2982 hypothetical protein YP_001777955.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2983 transcriptional regulator, LysR family YP_001777956.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B2984 NADH dehydrogenase, FAD-containing subunit YP_001777957.1 KEGG: bur:Bcep18194_B2985 hypothetical protein YP_001777958.1 PFAM: histidine acid phosphatase; KEGG: bur:Bcep18194_B2986 histidine acid phosphatase YP_001777959.1 KEGG: azc:AZC_1720 hypothetical protein YP_001777960.1 KEGG: bur:Bcep18194_B2990 hypothetical protein YP_001777961.1 KEGG: bur:Bcep18194_B2991 hypothetical protein YP_001777962.1 PFAM: EAL domain protein; KEGG: bur:Bcep18194_B2992 diguanylate phosphodiesterase (EAL domain) YP_001777963.1 KEGG: bpd:BURPS668_A2923 hypothetical protein YP_001777964.1 transports degraded pectin products into the bacterial cell YP_001777965.1 KEGG: bur:Bcep18194_B3000 hypothetical protein YP_001777966.1 Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C YP_001777967.1 KEGG: bur:Bcep18194_B3004 hypothetical protein YP_001777968.1 PFAM: heat shock protein DnaJ domain protein; KEGG: bam:Bamb_5083 heat shock protein DnaJ domain protein YP_001777969.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5082 transcriptional regulator, LysR family YP_001777970.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bam:Bamb_5081 acyl-CoA dehydrogenase domain protein YP_001777971.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_5080 short-chain dehydrogenase/reductase SDR YP_001777972.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B3037 short chain dehydrogenase YP_001777973.1 PFAM: aminoglycoside phosphotransferase; KEGG: bam:Bamb_5078 aminoglycoside phosphotransferase YP_001777974.1 PFAM: Phosphoglycerate mutase; KEGG: bam:Bamb_5077 phosphoglycerate mutase YP_001777975.1 KEGG: cvi:CV_1903 hypothetical protein YP_001777976.1 KEGG: bvi:Bcep1808_3876 hypothetical protein YP_001777977.1 KEGG: bur:Bcep18194_B3042 hypothetical protein YP_001777978.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B3043 transcriptional regulator, LysR family YP_001777979.1 TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_B3044 zinc-containing alcohol dehydrogenase superfamily YP_001777980.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B3045 transcriptional regulator, LysR family YP_001777981.1 PFAM: regulatory protein LuxR; KEGG: bur:Bcep18194_B3046 ATP-dependent transcriptional regulator, MalT-like, LuxR family YP_001777982.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_B3048 AMP-dependent synthetase and ligase YP_001777983.1 Hsp31 stabilizes early unfolding protein intermediates under severe heat stress YP_001777984.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: reh:H16_A0843 acyl-CoA dehydrogenase YP_001777985.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_C6843 transcriptional regulator, TetR family YP_001777986.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_C6842 FAD dependent oxidoreductase YP_001777987.1 PFAM: Thiolase; KEGG: reh:H16_A0840 3-ketoacyl-CoA-thiolase P-44/SCP2 YP_001777988.1 PFAM: AMP-dependent synthetase and ligase; KEGG: reh:H16_A0839 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II YP_001777989.1 PFAM: Saccharopine dehydrogenase; KEGG: reh:H16_A0838 hypothetical protein YP_001777990.1 KEGG: bur:Bcep18194_C6830 cytochrome c, class I YP_001777991.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: bur:Bcep18194_C6829 amine oxidase YP_001777992.1 PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: bur:Bcep18194_C6841 hypothetical protein YP_001777993.1 KEGG: bur:Bcep18194_C6841 hypothetical protein YP_001777994.1 KEGG: bur:Bcep18194_C6840 exporter, RND superfamily YP_001777995.1 PFAM: protein of unknown function DUF1302; KEGG: bur:Bcep18194_C6839 protein of unknown function DUF1302 YP_001777996.1 PFAM: protein of unknown function DUF1329; KEGG: bur:Bcep18194_C6838 protein of unknown function DUF1329 YP_001777997.1 PFAM: Endoribonuclease L-PSP; KEGG: bur:Bcep18194_C6837 endoribonuclease L-PSP YP_001777998.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: bur:Bcep18194_C6836 phytanoyl-CoA dioxygenase YP_001777999.1 PFAM: regulatory protein TetR; KEGG: bvi:Bcep1808_1682 transcriptional regulator, TetR family YP_001778000.1 KEGG: bur:Bcep18194_C6835 hypothetical protein YP_001778001.1 PFAM: cytochrome c class I; KEGG: reu:Reut_C6402 cytochrome c, class I YP_001778002.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: bur:Bcep18194_C6833 amine oxidase YP_001778003.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bmu:Bmul_4353 two component transcriptional regulator, winged helix family YP_001778004.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_B3051 periplasmic sensor signal transduction histidine kinase YP_001778005.1 KEGG: bur:Bcep18194_B3052 hypothetical protein YP_001778006.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B3053 major facilitator superfamily (MFS_1) transporter YP_001778007.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B3054 transcriptional regulator, LysR family YP_001778008.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate) YP_001778009.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bam:Bamb_5071 mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein YP_001778010.1 PFAM: dihydrodipicolinate synthetase; KEGG: bam:Bamb_5070 dihydrodipicolinate synthetase YP_001778011.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B3058 major facilitator superfamily (MFS_1) transporter YP_001778012.1 KEGG: bur:Bcep18194_B3059 hypothetical protein YP_001778013.1 PFAM: amidohydrolase 2; KEGG: bam:Bamb_5067 amidohydrolase 2 YP_001778014.1 PFAM: extracellular solute-binding protein family 1; KEGG: bur:Bcep18194_B3065 ABC sugar transporter, periplasmic ligand binding protein YP_001778015.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B3066 ABC sugar transporter, inner membrane subunit YP_001778016.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B3067 ABC sugar transporter, inner membrane subunit YP_001778017.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_B3068 zinc-containing alcohol dehydrogenase superfamily YP_001778018.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_B3069 ABC sugar transporter, ATPase subunit YP_001778019.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B3070 transcriptional regulator, AraC family YP_001778020.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: bur:Bcep18194_B3071 xylulokinase YP_001778021.1 PFAM: regulatory protein MerR; KEGG: bam:Bamb_5066 transcriptional regulator, MerR family YP_001778022.1 KEGG: bur:Bcep18194_B3077 esterase/lipase-like YP_001778023.1 PFAM: MASE1 domain protein; PAS fold-3 domain protein; KEGG: bur:Bcep18194_B3078 putative integral membrane sensor protein YP_001778024.1 KEGG: bam:Bamb_5065 hypothetical protein YP_001778025.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B3082 GCN5-related N-acetyltransferase YP_001778026.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bur:Bcep18194_B3083 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001778027.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bur:Bcep18194_B3085 hypothetical protein YP_001778028.1 PFAM: sodium:dicarboxylate symporter; KEGG: bur:Bcep18194_B3086 sodium/dicarboxylate symporter YP_001778029.1 PFAM: regulatory protein TetR; KEGG: bbt:BBta_3781 putative transcriptional regulatory protein, TetR/AcrR family YP_001778030.1 PFAM: glycosyl transferase group 1; KEGG: bur:Bcep18194_B3087 glycosyl transferase, group 1 YP_001778031.1 KEGG: bur:Bcep18194_B3088 hypothetical protein YP_001778032.1 PFAM: polysaccharide deacetylase; KEGG: bur:Bcep18194_B3089 polysaccharide deacetylase YP_001778033.1 KEGG: bmu:Bmul_0174 hypothetical protein YP_001778034.1 KEGG: bmu:Bmul_0173 hypothetical protein YP_001778035.1 PFAM: OmpW family protein; KEGG: bpd:BURPS668_3692 OmpW family protein YP_001778036.1 PFAM: AMP-dependent synthetase and ligase; KEGG: reh:H16_B1398 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II YP_001778037.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bmu:Bmul_5807 fumarylacetoacetate (FAA) hydrolase YP_001778038.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bmu:Bmul_5806 glyoxalase/bleomycin resistance protein/dioxygenase YP_001778039.1 PFAM: monooxygenase FAD-binding; KEGG: bmu:Bmul_5805 monooxygenase FAD-binding YP_001778040.1 PFAM: regulatory protein TetR; KEGG: bmu:Bmul_5804 transcriptional regulator, TetR family YP_001778041.1 PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl_0659 major facilitator superfamily MFS_1 YP_001778042.1 KEGG: bvi:Bcep1808_0855 hypothetical protein YP_001778043.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_001778044.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bam:Bamb_5798 cold-shock DNA-binding domain protein YP_001778046.1 KEGG: bpd:BURPS668_1129 hypothetical protein YP_001778047.1 KEGG: bte:BTH_I0503 hypothetical protein YP_001778048.1 KEGG: bam:Bamb_1022 hypothetical protein YP_001778049.1 KEGG: bxe:Bxe_A3351 hypothetical protein YP_001778050.1 KEGG: bxe:Bxe_A1527 hypothetical protein YP_001778051.1 KEGG: bam:Bamb_5805 hypothetical protein YP_001778053.1 KEGG: bxe:Bxe_B2641 fatty acid desaturase YP_001778054.1 KEGG: bpa:BPP2077 hypothetical protein YP_001778055.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: bxe:Bxe_C0542 transcriptional regulator, Crp/Fnr family YP_001778056.1 KEGG: eba:p2A67 hypothetical protein YP_001778057.1 KEGG: bxe:Bxe_C1344 hypothetical protein YP_001778058.1 PFAM: transposase IS3/IS911 family protein; KEGG: rme:Rmet_5496 transposase IS3/IS911 YP_001778059.1 KEGG: rme:Rmet_5497 integrase, catalytic region YP_001778060.1 PFAM: Integrase catalytic region; KEGG: msm:MSMEG_2675 ISMsm8, transposase YP_001778061.1 KEGG: bxe:Bxe_A0175 outer membrane porin, OmpA/MotB family YP_001778062.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bmu:Bmul_5368 major facilitator superfamily MFS_1 YP_001778063.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bmu:Bmul_5367 mandelate racemase/muconate lactonizing protein YP_001778064.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: reu:Reut_C6233 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase YP_001778065.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pst:PSPTO_4263 oxidoreductase, short chain dehydrogenase/reductase family YP_001778066.1 PFAM: OsmC family protein; KEGG: bam:Bamb_1978 OsmC family protein YP_001778067.1 PFAM: regulatory protein TetR; KEGG: bam:Bamb_1980 transcriptional regulator, TetR family YP_001778068.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: pst:PSPTO_4255 carboxymuconolactone decarboxylase family protein YP_001778069.1 PFAM: DSBA oxidoreductase; KEGG: bam:Bamb_1979 DsbA oxidoreductase YP_001778070.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bam:Bamb_1977 NADH:flavin oxidoreductase/NADH oxidase YP_001778071.1 PFAM: aminotransferase class I and II; KEGG: sha:SH0221 hypothetical protein YP_001778072.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: sus:Acid_3767 4-oxalocrotonate tautomerase YP_001778073.1 PFAM: transposase IS3/IS911 family protein; KEGG: pol:Bpro_5203 transposase IS3/IS911 YP_001778074.1 PFAM: Integrase catalytic region; KEGG: pol:Bpro_5204 integrase, catalytic region YP_001778075.1 PFAM: Integrase catalytic region; KEGG: bmu:Bmul_5758 integrase catalytic region YP_001778077.1 KEGG: bpl:BURPS1106A_3693 lipoprotein, putative YP_001778078.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpt:Bpet2198 transcriptional regulator, LysR-family YP_001778079.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: nca:Noca_1858 protein of unknown function DUF6, transmembrane YP_001778080.1 PFAM: NmrA family protein; KEGG: fgr:FG07809.1 hypothetical protein YP_001778081.1 KEGG: sus:Acid_2514 hypothetical protein YP_001778082.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: amr:AM1_6135 transcriptional regulator, AraC family YP_001778083.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mes:Meso_4271 transcriptional regulator, LysR family YP_001778084.1 PFAM: transposase mutator type; KEGG: rso:RSp0478 ISRSO7-transposase protein YP_001778085.1 KEGG: bmu:Bmul_5779 hypothetical protein YP_001778086.1 KEGG: bld:BLi04029 hypothetical protein YP_001778088.1 KEGG: bpm:BURPS1710b_1407 hypothetical protein YP_001778089.1 PFAM: polysaccharide deacetylase; KEGG: bur:Bcep18194_B3089 polysaccharide deacetylase YP_001778090.1 PFAM: glycosyl transferase group 1; KEGG: bur:Bcep18194_B3087 glycosyl transferase, group 1 YP_001778091.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce7020 transcriptional regulator, AraC family YP_001778092.1 PFAM: protein of unknown function DUF1311; KEGG: pfo:Pfl_3894 protein of unknown function DUF1311 YP_001778093.1 KEGG: bam:Bamb_4374 hypothetical protein YP_001778094.1 KEGG: bcs:BCAN_B1039 hypothetical protein YP_001778095.1 KEGG: pde:Pden_3086 hypothetical protein YP_001778097.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Proprotein convertase P; KEGG: shn:Shewana3_1678 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_001778098.1 PFAM: Integrase catalytic region; KEGG: msm:MSMEG_2675 ISMsm8, transposase YP_001778099.1 PFAM: transposase IS3/IS911 family protein; KEGG: rso:RSc2314 probable transposase protein YP_001778100.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bmu:Bmul_5281 lysine exporter protein (LysE/YggA) YP_001778101.1 KEGG: bvi:Bcep1808_3737 hypothetical protein YP_001778102.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B3124 major facilitator superfamily (MFS_1) transporter YP_001778103.1 KEGG: bur:Bcep18194_B3125 carboxymuconolactone decarboxylase; TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase YP_001778104.1 TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_5020 3-oxoadipate enol-lactonase YP_001778105.1 Catalyzes the cycloisomerization of cis,cis-muconate YP_001778106.1 KEGG: bur:Bcep18194_B3128 3-oxoadipate CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase YP_001778107.1 KEGG: bur:Bcep18194_B3129 3-oxoadipate CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase YP_001778108.1 catalyzes the formation of protocatechuate from 4-hydroxybenzoate YP_001778109.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B3131 transcriptional regulator, LysR family YP_001778110.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer YP_001778111.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B3133 short-chain dehydrogenase/reductase SDR YP_001778112.1 KEGG: bur:Bcep18194_B3134 serine O-acetyltransferase YP_001778113.1 KEGG: bur:Bcep18194_B3135 hypothetical protein YP_001778114.1 KEGG: bur:Bcep18194_B3136 hypothetical protein YP_001778115.1 PFAM: UspA domain protein; KEGG: bur:Bcep18194_B3137 universal stress protein, UspA family YP_001778116.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bur:Bcep18194_B3138 transcriptional regulator, Crp/Fnr family YP_001778117.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport YP_001778118.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B3140 lysine exporter family protein (LysE/YggA) YP_001778119.1 KEGG: bte:BTH_II0937 hypothetical protein YP_001778121.1 KEGG: xom:XOO_3313 hypothetical protein YP_001778122.1 TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: rso:RSc1944 putative VGR-related protein YP_001778123.1 PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_B3141 aldo/keto reductase YP_001778124.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B3145 transcriptional regulator, AraC family YP_001778125.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_B3146 hypothetical protein YP_001778126.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B3147 major facilitator superfamily (MFS_1) transporter YP_001778127.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_B3148 zinc-containing alcohol dehydrogenase superfamily YP_001778128.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B3149 short-chain dehydrogenase/reductase SDR YP_001778129.1 KEGG: bur:Bcep18194_B3150 outer membrane protein (porin) YP_001778130.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B3156 transcriptional regulator, AraC family YP_001778131.1 KEGG: bur:Bcep18194_B3157 MetA-pathway phenol degradation-like protein YP_001778132.1 PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: bur:Bcep18194_B3158 glucose-methanol-choline oxidoreductase YP_001778133.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B3159 betaine-aldehyde dehydrogenase YP_001778134.1 PFAM: protein of unknown function DUF181; KEGG: bam:Bamb_4992 hypothetical protein YP_001778135.1 KEGG: bam:Bamb_4991 hypothetical protein YP_001778136.1 KEGG: bam:Bamb_4990 hypothetical protein YP_001778137.1 PFAM: protein kinase; Tetratricopeptide TPR_4; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: bam:Bamb_4989 serine/threonine protein kinase YP_001778138.1 PFAM: Forkhead-associated protein; KEGG: bam:Bamb_4988 FHA domain containing protein YP_001778139.1 PFAM: fatty acid desaturase; KEGG: bur:Bcep18194_B0734 fatty acid desaturase YP_001778140.1 KEGG: bur:Bcep18194_B0735 hypothetical protein YP_001778141.1 KEGG: bur:Bcep18194_B0736 hypothetical protein YP_001778142.1 KEGG: bur:Bcep18194_B0737 hypothetical protein YP_001778143.1 KEGG: bur:Bcep18194_B0738 metal-dependent hydrolase YP_001778144.1 KEGG: bur:Bcep18194_B0739 fatty acid desaturase YP_001778145.1 PFAM: GH3 auxin-responsive promoter; KEGG: bur:Bcep18194_B0740 auxin-responsive GH3-related protein YP_001778146.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bur:Bcep18194_B0741 Rieske (2Fe-2S) protein YP_001778147.1 PFAM: PAAR repeat-containing protein; KEGG: bam:Bamb_5205 PaaR repeat-containing protein YP_001778148.1 KEGG: xom:XOO_0203 hypothetical protein YP_001778149.1 KEGG: azo:azo2942 hypothetical protein YP_001778150.1 TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: bte:BTH_II0089 rhs element Vgr protein, putative YP_001778151.1 PFAM: transcriptional regulator PadR family protein; KEGG: bam:Bamb_4987 transcriptional regulator, PadR-like family YP_001778152.1 PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: bur:Bcep18194_B3163 siderophore-interacting protein YP_001778153.1 KEGG: bur:Bcep18194_B3164 hypothetical protein YP_001778154.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: bur:Bcep18194_B3165 phosphoesterase, PA-phosphatase related YP_001778155.1 converts acetoacetate to acetone and carbon dioxide YP_001778156.1 catalyzes the formation of acetoacetate from 3-hydroxybutyrate YP_001778157.1 PFAM: Patatin; KEGG: bam:Bamb_4981 patatin YP_001778158.1 KEGG: bur:Bcep18194_B3169 hypothetical protein YP_001778159.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B3170 transcriptional regulator, LysR family YP_001778160.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis YP_001778161.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4977 transcriptional regulator, LysR family YP_001778162.1 KEGG: bur:Bcep18194_B3173 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_001778163.1 PFAM: protein of unknown function DUF1348; KEGG: bam:Bamb_4975 protein of unknown function DUF1348 YP_001778164.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_B3175 transcriptional regulator, TetR family YP_001778165.1 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism YP_001778166.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine YP_001778167.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_B3180 transcriptional regulator, XRE family with cupin sensor domain YP_001778168.1 KEGG: bam:Bamb_4970 hypothetical protein YP_001778169.1 PFAM: integrase family protein; KEGG: bur:Bcep18194_B0001 phage integrase YP_001778170.1 KEGG: bur:Bcep18194_B0002 hypothetical protein YP_001778171.1 KEGG: bur:Bcep18194_B0003 hypothetical protein YP_001778172.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bur:Bcep18194_B0004 ParB-like partition protein YP_001778173.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bur:Bcep18194_B0005 cobyrinic acid a,c-diamide synthase YP_001778174.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: bur:Bcep18194_B0006 arsenate reductase YP_001778175.1 KEGG: bur:Bcep18194_B0007 hypothetical protein YP_001778176.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_001778177.1 PFAM: NADPH-dependent FMN reductase; KEGG: bur:Bcep18194_B0009 NADPH-dependent FMN reductase YP_001778178.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_B0010 periplasmic sensor hybrid histidine kinase YP_001778179.1 PFAM: response regulator receiver; KEGG: bam:Bamb_4958 response regulator receiver protein YP_001778180.1 PFAM: CheC domain protein; KEGG: bur:Bcep18194_B0013 CheC, inhibitor of MCP methylation YP_001778181.1 KEGG: bur:Bcep18194_B0014 diguanylate cyclase (GGDEF domain); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: PAS domain containing protein YP_001778182.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B0015 esterase YP_001778183.1 KEGG: bur:Bcep18194_B0016 hypothetical protein YP_001778184.1 TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: bur:Bcep18194_B0017 squalene/phytoene synthase YP_001778185.1 TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; KEGG: bur:Bcep18194_B0018 amine oxidase YP_001778186.1 KEGG: bur:Bcep18194_B0019 terpene synthase/squalene cyclase; TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase YP_001778187.1 KEGG: bur:Bcep18194_B0020 hypothetical protein YP_001778188.1 PFAM: VacJ family lipoprotein; KEGG: bam:Bamb_4949 VacJ family lipoprotein YP_001778189.1 TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: bur:Bcep18194_B0022 efflux pump, RND superfamily YP_001778190.1 PFAM: toluene tolerance family protein; KEGG: bam:Bamb_4947 toluene tolerance family protein YP_001778191.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_B0024 transcriptional regulator, TetR family YP_001778192.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0025 drug resistance transporter, EmrB/QacA subfamily YP_001778193.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bam:Bamb_4946 two component transcriptional regulator, LuxR family YP_001778194.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; Cache type 2 domain protein; KEGG: bur:Bcep18194_B0027 periplasmic sensor signal transduction histidine kinase YP_001778195.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bur:Bcep18194_B0028 diguanylate cyclase (GGDEF domain) YP_001778196.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA YP_001778197.1 PFAM: protein of unknown function DUF336; KEGG: bur:Bcep18194_B0030 protein of unknown function DUF336 YP_001778198.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bur:Bcep18194_C7264 DEAD/DEAH box helicase YP_001778199.1 KEGG: bam:Bamb_3529 hypothetical protein YP_001778200.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4560 transcriptional regulator, LysR family YP_001778201.1 KEGG: bam:Bamb_4561 hypothetical protein YP_001778202.1 PFAM: helix-turn-helix HxlR type; KEGG: azc:AZC_0180 putative transcriptional regulator YP_001778203.1 PFAM: NmrA family protein; KEGG: azc:AZC_0181 putative isoflavone reductase YP_001778204.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_3824 binding-protein-dependent transport systems inner membrane component YP_001778205.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_4933 binding-protein-dependent transport systems inner membrane component YP_001778206.1 PFAM: extracellular solute-binding protein family 1; KEGG: bam:Bamb_4932 extracellular solute-binding protein, family 1 YP_001778207.1 PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; KEGG: bam:Bamb_4931 beta-galactosidase YP_001778208.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bvi:Bcep1808_3828 ABC transporter related YP_001778209.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bvi:Bcep1808_3829 periplasmic binding protein/LacI transcriptional regulator YP_001778210.1 PFAM: regulatory protein TetR; KEGG: gox:GOX0544 transcriptional regulator TetR family YP_001778211.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bur:Bcep18194_B0037 transcriptional regulator, GntR family YP_001778212.1 PFAM: OsmC family protein; KEGG: bur:Bcep18194_B0038 OsmC-like protein YP_001778213.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0040 transcriptional regulator, LysR family YP_001778214.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate YP_001778215.1 PFAM: dihydrodipicolinate synthetase; KEGG: bur:Bcep18194_B0042 dihydrodipicolinate synthetase YP_001778216.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bur:Bcep18194_B0043 D-galactose 1-dehydrogenase YP_001778217.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_B0044 ABC sugar transporter, periplasmic ligand binding protein YP_001778218.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose YP_001778219.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose YP_001778220.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bur:Bcep18194_B0048 senescence marker protein-30 (SMP-30) YP_001778221.1 PFAM: regulatory protein MarR; KEGG: bam:Bamb_4917 transcriptional regulator, MarR family YP_001778222.1 catalyzes the conversion of feruloyl-CoA to vanillin and acetyl-CoA YP_001778223.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B0051 aldehyde dehydrogenase YP_001778224.1 catalyzes the conversion of ferulic acid to feruloyl-CoA YP_001778225.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_4913 major facilitator superfamily MFS_1 YP_001778226.1 PFAM: porin Gram-negative type; KEGG: bam:Bamb_4912 porin, gram-negative type YP_001778227.1 PFAM: Tannase and feruloyl esterase; KEGG: bam:Bamb_4911 feruloyl esterase YP_001778228.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bur:Bcep18194_B0056 transcriptional regulator, AsnC family YP_001778229.1 catalyzes the formation of pyruvate from 2,3-diaminopropionate YP_001778230.1 KEGG: bam:Bamb_4907 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001778231.1 PFAM: glycoside hydrolase family 28; KEGG: bam:Bamb_4904 glycoside hydrolase, family 28 YP_001778232.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0061 GCN5-related N-acetyltransferase YP_001778233.1 PFAM: 17 kDa surface antigen; KEGG: bur:Bcep18194_B0066 outer membrane lipoprotein YP_001778234.1 Catalyzes the deamination of cytosine to uracil and ammonia YP_001778235.1 Catalyzes the deamination of cytosine to uracil and ammonia YP_001778236.1 PFAM: protein of unknown function DUF1486; KEGG: bur:Bcep18194_B0069 hypothetical protein YP_001778237.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0070 transcriptional regulator, LysR family YP_001778238.1 PFAM: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_B0073 ABC amino acid transporter, periplasmic ligand binding protein YP_001778239.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: bur:Bcep18194_B0074 phytanoyl-CoA dioxygenase YP_001778240.1 TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bur:Bcep18194_B0075 transcriptional regulator, histidine utilization repressor, GntR family YP_001778241.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_B0076 transcriptional regulator, XRE family with cupin sensor domain YP_001778242.1 PFAM: class II aldolase/adducin family protein; KEGG: bur:Bcep18194_B0077 hypothetical protein YP_001778243.1 PFAM: dihydrodipicolinate synthetase; KEGG: bur:Bcep18194_B0078 dihydrodipicolinate synthase YP_001778244.1 PFAM: MOSC domain containing protein; KEGG: bam:Bamb_4891 MOSC domain containing protein YP_001778245.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bam:Bamb_4890 short-chain dehydrogenase/reductase SDR YP_001778246.1 PFAM: protein of unknown function DUF480; KEGG: bvi:Bcep1808_3727 protein of unknown function DUF480 YP_001778247.1 KEGG: bur:Bcep18194_B0084 hypothetical protein YP_001778248.1 PFAM: secretory lipase; KEGG: bur:Bcep18194_B0085 triacylglycerol lipase YP_001778249.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive YP_001778250.1 PFAM: PRC-barrel domain protein; KEGG: bvi:Bcep1808_3724 PRC-barrel domain protein YP_001778251.1 PFAM: OsmC family protein; KEGG: bur:Bcep18194_B0089 OsmC-like protein YP_001778252.1 PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; KEGG: bur:Bcep18194_B0090 NAD-dependent epimerase/dehydratase YP_001778253.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0091 transcriptional regulator, LysR family YP_001778254.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_B0092 hypothetical protein YP_001778255.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: bur:Bcep18194_B0093 alkylhydroperoxidase AhpD core YP_001778256.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bur:Bcep18194_B0094 sigma-24 (FecI-like) YP_001778257.1 PFAM: diaminopimelate epimerase; KEGG: bur:Bcep18194_B0095 diaminopimelate epimerase YP_001778258.1 KEGG: bvi:Bcep1808_7048 hypothetical protein YP_001778259.1 KEGG: mms:mma_1712 hypothetical protein YP_001778261.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bmn:BMA10247_A0081 H-NS histone family protein YP_001778262.1 PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bam:Bamb_3152 YadA C-terminal domain protein YP_001778263.1 KEGG: rme:Rmet_1745 hypothetical protein YP_001778264.1 PFAM: protein of unknown function DUF81; KEGG: bur:Bcep18194_B1367 protein of unknown function DUF81 YP_001778265.1 KEGG: bxe:Bxe_A4067 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: extracellular solute-binding protein family 3 YP_001778266.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: psp:PSPPH_0778 DNA-binding response regulator, LuxR family YP_001778267.1 KEGG: stt:t1014 hypothetical protein YP_001778268.1 PFAM: type III secretion FHIPEP protein; KEGG: bpd:BURPS668_A0211 flagellar biosynthesis protein FlhA YP_001778269.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export YP_001778270.1 TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: cvi:CV_3005 flagellar biosynthetic protein FliR YP_001778271.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: bpd:BURPS668_A0215 flagellar biosynthetic protein FliQ YP_001778272.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus YP_001778273.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bpd:BURPS668_A0217 flagellar motor switch/type III secretory pathway protein YP_001778274.1 PFAM: surface presentation of antigens (SPOA) protein; KEGG: bte:BTH_II0169 hypothetical protein YP_001778275.1 PFAM: flagellin domain protein; KEGG: bpd:BURPS668_A0199 flagellin YP_001778276.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bam:Bamb_1442 two component transcriptional regulator, winged helix family YP_001778277.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bam:Bamb_1427 periplasmic sensor signal transduction histidine kinase YP_001778278.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: sdn:Sden_3660 flagellar hook-basal body complex protein (FliE) YP_001778279.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; the Vibrio parahaemolyticus protein is associated with the lateral flagella YP_001778280.1 One of three proteins involved in switching the direction of the flagellar rotation YP_001778281.1 PFAM: flagellar assembly protein FliH; KEGG: bte:BTH_II0173 flagellar assembly protein FliH YP_001778282.1 KEGG: bte:BTH_II0174 flagellum-specific ATP synthase FliI; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase YP_001778283.1 KEGG: bte:BTH_II0175 hypothetical protein YP_001778284.1 PFAM: flagellar hook-associated 2 domain protein; KEGG: cvi:CV_2994 flagellar hook-associated protein YP_001778285.1 PFAM: flagellar protein FliS; KEGG: bte:BTH_II0177 flagellar protein FliS YP_001778287.1 PFAM: flagellar hook-length control protein; KEGG: bte:BTH_II0179 flagellar hook-length control protein, putative YP_001778288.1 TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bpd:BURPS668_A0233 RNA polymerase sigma factor for flagellar operon FliA YP_001778289.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: cvi:CV_2989 flagellar motor protein MotA YP_001778290.1 PFAM: OmpA/MotB domain protein; KEGG: cvi:CV_2988 chemotaxis LafU protein YP_001778291.1 KEGG: cvi:CV_2986 hypothetical protein YP_001778292.1 KEGG: bpd:BURPS668_A0235 hypothetical protein YP_001778293.1 PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; KEGG: bte:BTH_II0182 flagellar protein FlgJ YP_001778294.1 TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: bte:BTH_II0183 flagella basal body P-ring formation protein FlgA YP_001778295.1 TIGRFAM: flagellar basal-body rod protein FlgB; KEGG: bpd:BURPS668_A0237 flagellar basal-body rod protein FlgB YP_001778296.1 TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: cvi:CV_1702 flagellar basal-body rod protein FlgC YP_001778297.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production YP_001778298.1 PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: bte:BTH_II0187 flagellar hook protein FlgE YP_001778299.1 TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: bte:BTH_II0188 flagellar basal-body rod protein FlgF YP_001778300.1 makes up the distal portion of the flagellar basal body rod YP_001778301.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod YP_001778302.1 PFAM: flagellar P-ring protein; KEGG: bte:BTH_II0191 flagellar P-ring protein FlgI YP_001778303.1 KEGG: bte:BTH_II0192 peptidoglycan hydrolase YP_001778304.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook YP_001778305.1 TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: cvi:CV_1710 flagellar hook-associated protein FlgL YP_001778306.1 KEGG: cvi:CV_1711 hypothetical protein YP_001778307.1 KEGG: asa:ASA_3281 hypothetical protein YP_001778308.1 KEGG: asa:ASA_3281 hypothetical protein YP_001778310.1 KEGG: asa:ASA_3281 hypothetical protein YP_001778312.1 KEGG: pfo:Pfl_4570 hypothetical protein YP_001778313.1 KEGG: pfo:Pfl_4566 hypothetical protein YP_001778314.1 KEGG: pen:PSEEN1459 hypothetical protein YP_001778315.1 KEGG: asa:ASA_3281 hypothetical protein YP_001778316.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: rso:RSp1621 probable capsular synthesis response regulator transcription regulator protein YP_001778317.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rso:RSp1622 probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein YP_001778318.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: fal:FRAAL1331 putative 4-oxalocrotonate tautomerase YP_001778320.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bte:BTH_I2674 DNA-binding response regulator YP_001778321.1 KEGG: bxe:Bxe_A4067 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: extracellular solute-binding protein family 3 YP_001778322.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: psp:PSPPH_0778 DNA-binding response regulator, LuxR family YP_001778323.1 KEGG: pen:PSEEN2836 hypothetical protein YP_001778324.1 PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bam:Bamb_3152 YadA C-terminal domain protein YP_001778325.1 KEGG: vfi:VFA1105 HvnC; halovibrin YP_001778326.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bvi:Bcep1808_6075 phage integrase family protein YP_001778327.1 KEGG: bmu:Bmul_4729 hypothetical protein YP_001778328.1 PFAM: transposase IS3/IS911 family protein; KEGG: rme:Rmet_5496 transposase IS3/IS911 YP_001778329.1 PFAM: Integrase catalytic region; KEGG: rme:Rmet_5497 integrase, catalytic region YP_001778330.1 PFAM: carbon starvation protein CstA; KEGG: bur:Bcep18194_B0097 carbon starvation protein CstA YP_001778331.1 PFAM: protein of unknown function DUF466; KEGG: bmu:Bmul_3246 protein of unknown function DUF466 YP_001778332.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: bur:Bcep18194_B0099 hemolysin HylII family protein YP_001778333.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0100 major facilitator superfamily (MFS_1) transporter YP_001778334.1 KEGG: bmu:Bmul_3248 hypothetical protein YP_001778335.1 PFAM: Dopa 45-dioxygenase; KEGG: bur:Bcep18194_B0102 aromatic ring-cleaving dioxygenase-like YP_001778336.1 KEGG: bmu:Bmul_3250 hypothetical protein YP_001778337.1 KEGG: bam:Bamb_4879 hypothetical protein YP_001778338.1 KEGG: bam:Bamb_4878 hypothetical protein YP_001778339.1 TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM domain protein; KEGG: bam:Bamb_4877 radical SAM domain protein YP_001778340.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway YP_001778341.1 TIGRFAM: hopene-associated glycosyltransferase HpnB; PFAM: glycosyl transferase family 2; KEGG: bur:Bcep18194_B0107 glycosyl transferase, family 2 YP_001778342.1 KEGG: bur:Bcep18194_B0108 hypothetical protein YP_001778343.1 TIGRFAM: hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: bur:Bcep18194_B0109 NAD-dependent epimerase/dehydratase YP_001778344.1 catalyzes the hydrolysis of acylphosphate YP_001778345.1 TIGRFAM: RarD protein, DMT superfamily transporter; KEGG: bam:Bamb_4871 RarD protein, DMT superfamily transporter YP_001778346.1 KEGG: bur:Bcep18194_B0112 hypothetical protein YP_001778347.1 KEGG: bam:Bamb_4869 hypothetical protein YP_001778348.1 KEGG: bur:Bcep18194_B0113 amino acid/peptide transporter; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1 YP_001778349.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_B0114 transcriptional regulator, XRE family with cupin sensor domain YP_001778350.1 PFAM: extracellular solute-binding protein family 5; KEGG: bam:Bamb_4866 extracellular solute-binding protein, family 5 YP_001778351.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmu:Bmul_3264 binding-protein-dependent transport systems inner membrane component YP_001778352.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0117 ABC dipeptide/oligopeptide/nickel family transporter, inner membrane subunit YP_001778353.1 KEGG: bam:Bamb_4863 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001778354.1 KEGG: bam:Bamb_4862 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001778355.1 PFAM: outer membrane porin; KEGG: bam:Bamb_4861 outer membrane porin YP_001778356.1 SMART: Rhodanese domain protein; KEGG: bam:Bamb_4860 rhodanese domain protein YP_001778357.1 KEGG: bmu:Bmul_3270 hypothetical protein YP_001778358.1 KEGG: bur:Bcep18194_B0123 phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756 YP_001778359.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0124 GCN5-related N-acetyltransferase YP_001778360.1 PFAM: Thioredoxin domain; KEGG: bur:Bcep18194_B0125 hypothetical protein YP_001778361.1 KEGG: bam:Bamb_4855 hypothetical protein YP_001778362.1 PFAM: Citrate transporter; KEGG: bur:Bcep18194_B0128 H+/gluconate symporter family protein YP_001778363.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_B0129 sigma54 specific transcriptional regulator with PAS sensor, fis family YP_001778364.1 KEGG: bur:Bcep18194_B0130 hypothetical protein YP_001778365.1 KEGG: bam:Bamb_4851 hypothetical protein YP_001778366.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bur:Bcep18194_B0132 histone-like nucleoid-structuring protein H-NS YP_001778367.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: bur:Bcep18194_B0134 GCN5-related N-acetyltransferase YP_001778368.1 KEGG: bur:Bcep18194_B0135 hypothetical protein YP_001778369.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bur:Bcep18194_B0136 transcriptional regulator, IclR family YP_001778370.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bur:Bcep18194_B0137 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase YP_001778371.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_B0138 glyoxalase/bleomycin resistance protein/dioxygenase YP_001778373.1 PFAM: protein of unknown function DUF1470; KEGG: bur:Bcep18194_B0139 protein of unknown function DUF1470 YP_001778374.1 KEGG: bam:Bamb_4843 sigma54 specific transcriptional regulator, fis family; TIGRFAM: propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; Propionate catabolism activator domain protein; ATPase associated with various cellular activities AAA_5; SMART: PAS domain containing protein; AAA ATPase YP_001778375.1 catalyzes the formation of pyruvate and succinate from 2-methylisocitrate YP_001778376.1 catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity YP_001778377.1 Catalyzes the conversion of citrate to isocitrate YP_001778378.1 TIGRFAM: AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453; KEGG: bur:Bcep18194_B0144 protein of unknown function DUF453 YP_001778379.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bur:Bcep18194_B0145 esterase/lipase/thioesterase YP_001778380.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_B0146 acyl-CoA dehydrogenase YP_001778381.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0147 major facilitator superfamily (MFS_1) transporter YP_001778382.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B0148 outer membrane protein (porin) YP_001778383.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bur:Bcep18194_B0149 enoyl-CoA hydratase/isomerase YP_001778384.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_B0150 L-carnitine dehydratase/bile acid-inducible protein F YP_001778385.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001778386.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bur:Bcep18194_B0152 transcriptional regulator, IclR family YP_001778387.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bam:Bamb_4838 L-carnitine dehydratase/bile acid-inducible protein F YP_001778388.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: bam:Bamb_4837 prevent-host-death family protein YP_001778389.1 KEGG: bur:Bcep18194_B0155 plasmid stabilization system YP_001778390.1 PFAM: thioesterase superfamily protein; KEGG: bur:Bcep18194_B0156 phenylacetic acid degradation-related protein YP_001778391.1 PFAM: ligand binding Tar domain protein; histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bur:Bcep18194_B0157 methyl-accepting chemotaxis sensory transducer YP_001778392.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: bur:Bcep18194_B0158 N-acylglucosamine 2-epimerase YP_001778393.1 PFAM: MgtC/SapB transporter; KEGG: bam:Bamb_4832 MgtC/SapB transporter YP_001778394.1 KEGG: bur:Bcep18194_B0159 hypothetical protein YP_001778395.1 KEGG: bvi:Bcep1808_3668 hypothetical protein YP_001778396.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0161 GCN5-related N-acetyltransferase YP_001778397.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: bur:Bcep18194_B0162 copper-translocating P-type ATPase YP_001778398.1 PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: bur:Bcep18194_B0165 hypothetical protein YP_001778399.1 PFAM: protein of unknown function DUF748; KEGG: bam:Bamb_4825 protein of unknown function DUF748 YP_001778400.1 KEGG: bvi:Bcep1808_3662 hypothetical protein YP_001778401.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: bam:Bamb_4823 type I phosphodiesterase/nucleotide pyrophosphatase YP_001778402.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_3660 transcriptional regulator, LysR family YP_001778403.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_3659 binding-protein-dependent transport systems inner membrane component YP_001778404.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_3658 ABC transporter related YP_001778405.1 PFAM: extracellular solute-binding protein family 1; KEGG: bvi:Bcep1808_3657 ABC transporter, periplasmic substrate-binding protein YP_001778406.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_3656 binding-protein-dependent transport systems inner membrane component YP_001778407.1 KEGG: bvi:Bcep1808_3655 hypothetical protein YP_001778408.1 KEGG: bam:Bamb_4822 hypothetical protein YP_001778409.1 KEGG: bam:Bamb_4820 hypothetical protein YP_001778410.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: bur:Bcep18194_B0174 cytochrome bd ubiquinol oxidase, subunit II YP_001778411.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bur:Bcep18194_B0175 cytochrome bd ubiquinol oxidase, subunit I YP_001778412.1 KEGG: bur:Bcep18194_B0176 hypothetical protein YP_001778413.1 KEGG: bur:Bcep18194_B0177 hypothetical protein YP_001778414.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bam:Bamb_4817 threonine aldolase YP_001778415.1 KEGG: bmu:Bmul_3311 hypothetical protein YP_001778416.1 specific inhibitor of chromosomal initiation of replication in vitro; inds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport YP_001778417.1 PFAM: beta-lactamase domain protein; Rhodanese domain protein; KEGG: bam:Bamb_4814 beta-lactamase domain protein YP_001778418.1 PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_B0183 glutathione S-transferase-like YP_001778419.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: bur:Bcep18194_B0184 phosphoesterase, PA-phosphatase related YP_001778420.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0185 major facilitator superfamily (MFS_1) transporter YP_001778421.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4810 transcriptional regulator, LysR family YP_001778422.1 PFAM: DSBA oxidoreductase; KEGG: bur:Bcep18194_B0187 DsbA oxidoreductase YP_001778423.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bam:Bamb_4808 transcriptional regulator, IclR family YP_001778424.1 PFAM: pyruvate carboxyltransferase; KEGG: bam:Bamb_4807 pyruvate carboxyltransferase YP_001778425.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bam:Bamb_4806 L-carnitine dehydratase/bile acid-inducible protein F YP_001778426.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_4805 major facilitator superfamily MFS_1 YP_001778427.1 PFAM: amidohydrolase 2; KEGG: bam:Bamb_4804 amidohydrolase 2 YP_001778428.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bur:Bcep18194_B0188 hypothetical protein YP_001778429.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bur:Bcep18194_B0189 hypothetical protein YP_001778430.1 PFAM: regulatory protein ArsR; KEGG: bur:Bcep18194_B0190 transcriptional regulator, ArsR family YP_001778431.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0191 GCN5-related N-acetyltransferase YP_001778432.1 KEGG: bur:Bcep18194_B0194 hypothetical protein YP_001778433.1 PFAM: regulatory protein TetR; KEGG: bam:Bamb_4799 transcriptional regulator, TetR family YP_001778434.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_4798 short-chain dehydrogenase/reductase SDR YP_001778435.1 enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity YP_001778436.1 KEGG: bur:Bcep18194_B0198 transcriptional regulators-like YP_001778437.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bur:Bcep18194_B0199 NAD-dependent epimerase/dehydratase YP_001778438.1 KEGG: bam:Bamb_4794 integral membrane protein-like protein YP_001778439.1 PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: bur:Bcep18194_B0201 putative thiol-disulphide oxidoreductase DCC YP_001778440.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; domain of unknown function DUF1731; KEGG: bur:Bcep18194_B0202 hypothetical protein YP_001778441.1 PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_B0203 glutathione S-transferase-like YP_001778442.1 PFAM: beta-lactamase; KEGG: bur:Bcep18194_B0204 beta-lactamase YP_001778443.1 PFAM: histidine triad (HIT) protein; KEGG: bur:Bcep18194_B0206 histidine triad (HIT) protein YP_001778444.1 KEGG: bur:Bcep18194_B0207 hypothetical protein YP_001778445.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: bur:Bcep18194_B0208 isoprenylcysteine carboxyl methyltransferase YP_001778446.1 PFAM: 17 kDa surface antigen; KEGG: bvi:Bcep1808_3635 17 kDa surface antigen YP_001778447.1 TIGRFAM: allantoin catabolism protein; PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: bmu:Bmul_3330 allantoin catabolism protein YP_001778448.1 KEGG: bur:Bcep18194_B2840 hypothetical protein YP_001778449.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: zmo:ZMO1857 probable transcriptional regulator YP_001778450.1 PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; KEGG: bur:Bcep18194_B0213 aminoglycoside/hydroxyurea antibiotic resistance kinase YP_001778451.1 KEGG: bur:Bcep18194_B0214 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_001778452.1 PFAM: protein of unknown function UPF0126; KEGG: bur:Bcep18194_B0215 hypothetical protein YP_001778453.1 KEGG: bam:Bamb_4777 hypothetical protein YP_001778454.1 with HmuTU is involved in the import of hemin YP_001778455.1 PFAM: transport system permease protein; KEGG: bur:Bcep18194_B0218 ABC cobalamin/Fe3+-siderophore transporter, inner membrane subunit YP_001778456.1 PFAM: periplasmic binding protein; KEGG: bur:Bcep18194_B0219 ABC cobalamin/Fe3+-siderophore transporter, periplasmic ligand binding protein YP_001778457.1 PFAM: Haemin-degrading family protein; KEGG: bur:Bcep18194_B0220 heme degradation protein YP_001778458.1 TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bur:Bcep18194_B0221 TonB-dependent haemoglobin/transferrin/lactoferrin receptor YP_001778459.1 KEGG: bur:Bcep18194_B0222 hypothetical protein YP_001778460.1 KEGG: bvi:Bcep1808_3629 hypothetical protein YP_001778461.1 KEGG: bur:Bcep18194_B0224 hypothetical protein YP_001778462.1 PFAM: porin Gram-negative type; KEGG: bmu:Bmul_3342 porin gram-negative type YP_001778463.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: bur:Bcep18194_B0226 lipoprotein, YaeC family YP_001778464.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bur:Bcep18194_B0227 succinylglutamate desuccinylase/aspartoacylase YP_001778465.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_B0228 lysine-arginine-ornithine ABC transporter, periplasmic ligand binding protein YP_001778466.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0229 transcriptional regulator, LysR family YP_001778467.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bam:Bamb_4763 transcriptional regulator, AraC family YP_001778468.1 KEGG: bam:Bamb_4762 hypothetical protein YP_001778469.1 KEGG: bur:Bcep18194_B0232 hypothetical protein YP_001778470.1 KEGG: bur:Bcep18194_B0233 hypothetical protein YP_001778471.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bam:Bamb_4759 xanthine/uracil/vitamin C permease YP_001778472.1 PFAM: regulatory protein TetR; KEGG: bam:Bamb_4758 transcriptional regulator, TetR family YP_001778473.1 PFAM: O-methyltransferase family 3; KEGG: bur:Bcep18194_B0236 O-methyltransferase, family 3 YP_001778474.1 KEGG: bam:Bamb_4756 hypothetical protein YP_001778475.1 PFAM: cyclase family protein; KEGG: pap:PSPA7_0926 cyclase family protein YP_001778476.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bur:Bcep18194_B0239 NADH-flavin oxidoreductase/NADH oxidase YP_001778477.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bmu:Bmul_5809 transposase IS116/IS110/IS902 family protein YP_001778478.1 catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid YP_001778479.1 PFAM: luciferase family protein; KEGG: bam:Bamb_4752 luciferase family protein YP_001778480.1 KEGG: bvi:Bcep1808_3604 hypothetical protein YP_001778481.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_4750 major facilitator superfamily MFS_1 YP_001778482.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4749 transcriptional regulator, LysR family YP_001778483.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_001778484.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_B0243 transcriptional regulator, TetR family YP_001778485.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B0244 short-chain dehydrogenase/reductase SDR YP_001778486.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: kpn:KPN_02619 putative transcriptional regulator (LysR family) YP_001778487.1 PFAM: beta-lactamase; KEGG: kpn:KPN_02620 putative beta-lactamase YP_001778488.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: bvi:Bcep1808_3598 uncharacterized peroxidase-related enzyme YP_001778489.1 TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_B0250 zinc-containing alcohol dehydrogenase superfamily YP_001778490.1 PFAM: regulatory protein TetR; KEGG: bam:Bamb_4743 transcriptional regulator, TetR family YP_001778491.1 PFAM: regulatory protein IclR; KEGG: bmu:Bmul_4707 transcriptional regulator, IclR family YP_001778492.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: bmu:Bmul_4706 dimethylmenaquinone methyltransferase YP_001778493.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bmu:Bmul_4705 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_001778494.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bmu:Bmul_4704 SMP-30/gluconolaconase/LRE domain protein YP_001778495.1 PFAM: major facilitator superfamily MFS_1; KEGG: bmu:Bmul_4703 major facilitator superfamily MFS_1 YP_001778496.1 PFAM: porin Gram-negative type; KEGG: bmu:Bmul_4702 porin gram-negative type YP_001778497.1 PFAM: amidohydrolase 2; KEGG: bmu:Bmul_4701 amidohydrolase 2 YP_001778498.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bmu:Bmul_4700 major facilitator superfamily MFS_1 YP_001778499.1 PFAM: major facilitator superfamily MFS_1; KEGG: bmu:Bmul_4699 major facilitator superfamily MFS_1 YP_001778500.1 PFAM: major facilitator superfamily MFS_1; KEGG: bmu:Bmul_4698 major facilitator superfamily MFS_1 YP_001778501.1 PFAM: amidohydrolase 2; KEGG: bmu:Bmul_4697 amidohydrolase 2 YP_001778502.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc3332 probable transcription regulator protein YP_001778503.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc3331 short chain dehydrogenase YP_001778504.1 KEGG: bam:Bamb_5628 hypothetical protein YP_001778505.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_3272 regulatory protein YP_001778506.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RS03073 probable transcription regulator protein YP_001778507.1 PFAM: major facilitator superfamily MFS_1; KEGG: xcb:XC_0298 transcriptional regulator YP_001778508.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bur:Bcep18194_B0806 (2Fe-2S)-binding protein YP_001778509.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bur:Bcep18194_B0807 aldehyde oxidase YP_001778510.1 PFAM: cytochrome c class I; KEGG: bur:Bcep18194_B0808 cytochrome c, class I YP_001778511.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4738 transcriptional regulator, LysR family YP_001778512.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bam:Bamb_4739 short-chain dehydrogenase/reductase SDR YP_001778513.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bam:Bamb_4740 NADH:flavin oxidoreductase/NADH oxidase YP_001778514.1 PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_4742 alpha/beta hydrolase fold YP_001778515.1 PFAM: protein of unknown function DUF1486; Limonene-12-epoxide hydrolase; KEGG: nfa:nfa41920 hypothetical protein YP_001778516.1 KEGG: bur:Bcep18194_B0252 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001778517.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0253 major facilitator superfamily (MFS_1) transporter YP_001778518.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0254 transcriptional regulator, LysR family YP_001778519.1 PFAM: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_B0255 extracellular solute-binding protein, family 3 YP_001778520.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bur:Bcep18194_B0256 succinylglutamate desuccinylase/aspartoacylase YP_001778521.1 TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bur:Bcep18194_B0262 transcriptional regulator, IclR family YP_001778522.1 catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA YP_001778523.1 PFAM: protein of unknown function DUF523; KEGG: bur:Bcep18194_B0264 protein of unknown function DUF523 YP_001778524.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0265 GCN5-related N-acetyltransferase YP_001778525.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_B0266 hypothetical protein YP_001778526.1 TIGRFAM: PAS sensor protein; PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: bur:Bcep18194_B0267 methyl-accepting chemotaxis sensory transducer YP_001778527.1 TIGRFAM: PAS sensor protein; PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; KEGG: bur:Bcep18194_B0268 methyl-accepting chemotaxis sensory transducer YP_001778528.1 TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B0279 succinic semialdehyde dehydrogenase YP_001778529.1 TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: bur:Bcep18194_B0280 4-aminobutyrate aminotransferase YP_001778530.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bam:Bamb_4710 transcriptional regulator, GntR family YP_001778531.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bam:Bamb_4709 protein of unknown function DUF6, transmembrane YP_001778532.1 catalyzes the formation of selenophosphate from selenide and ATP YP_001778533.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B0288 lysine exporter family protein (LysE/YggA) YP_001778534.1 PFAM: purine nucleoside permease; KEGG: bam:Bamb_4706 purine nucleoside permease YP_001778535.1 KEGG: bur:Bcep18194_B0292 hypothetical protein YP_001778536.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0293 transcriptional regulator, LysR family YP_001778537.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bam:Bamb_4700 alpha/beta hydrolase fold-3 domain protein YP_001778538.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bam:Bamb_4699 efflux transporter, RND family, MFP subunit YP_001778539.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bur:Bcep18194_B0296 hydrophobe/amphiphile efflux pump, HAE1 YP_001778540.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bam:Bamb_4697 RND efflux system, outer membrane lipoprotein, NodT family YP_001778541.1 KEGG: bam:Bamb_2122 hypothetical protein YP_001778542.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4696 transcriptional regulator, LysR family YP_001778543.1 PFAM: transmembrane pair domain protein; KEGG: bam:Bamb_4695 transmembrane pair domain protein YP_001778544.1 PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_4694 alpha/beta hydrolase fold YP_001778545.1 KEGG: bur:Bcep18194_B0305 hypothetical protein YP_001778546.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bur:Bcep18194_B0306 two component, sigma54 specific, transcriptional regulator, fis family YP_001778547.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bvi:Bcep1808_3572 histidine kinase YP_001778548.1 PFAM: Citrate carrier protein; KEGG: bvi:Bcep1808_3571 citrate carrier protein YP_001778549.1 PFAM: NLPA lipoprotein; KEGG: bur:Bcep18194_B0309 NlpA lipoprotein YP_001778550.1 KEGG: bur:Bcep18194_B0310 flavin-dependent oxidoreductase YP_001778551.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_B0311 ABC metal ion transporter, ATPase subunit YP_001778552.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0312 ABC metal ion transporter, inner membrane subunit YP_001778553.1 KEGG: bur:Bcep18194_B0313 hypothetical protein YP_001778554.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_B0314 acyl-CoA dehydrogenase-like YP_001778555.1 KEGG: bur:Bcep18194_B0315 hypothetical protein YP_001778556.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bur:Bcep18194_B0316 cobalamin synthesis protein/P47K YP_001778557.1 similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis YP_001778558.1 KEGG: bur:Bcep18194_B0318 6-pyruvoyl-tetrahydropterin synthase-like YP_001778559.1 KEGG: bur:Bcep18194_B0319 carbonic anhydrase/acetyltransferase isoleucine patch superfamily YP_001778560.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides YP_001778561.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bur:Bcep18194_B0321 transcriptional regulator, AsnC family YP_001778562.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B0322 lysine exporter family protein (LysE/YggA) YP_001778563.1 PFAM: helix-turn-helix domain protein; KEGG: bur:Bcep18194_B0324 transcriptional regulator, XRE family YP_001778564.1 KEGG: bur:Bcep18194_B0325 uncharacterized membrane-anchored protein YP_001778565.1 PFAM: peptidase M50; KEGG: bur:Bcep18194_B0326 peptidase M50 YP_001778566.1 TIGRFAM: d-galactonate transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0327 D-galactonate transporter YP_001778567.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B0328 aldehyde dehydrogenase YP_001778568.1 PFAM: PilT protein domain protein; KEGG: bur:Bcep18194_B0329 PilT protein-like YP_001778569.1 KEGG: bam:Bamb_4678 hypothetical protein YP_001778570.1 KEGG: bmu:Bmul_3407 hypothetical protein YP_001778571.1 catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate YP_001778572.1 KEGG: bam:Bamb_4675 galactarate dehydratase; TIGRFAM: galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein YP_001778573.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: cps:CPS_4919 transcriptional regulator, AsnC family YP_001778574.1 PFAM: Extracellular ligand-binding receptor; KEGG: eba:ebA3175 putative amino acid ABC transporter YP_001778575.1 PFAM: formylmethionine deformylase; aminotransferase class IV; KEGG: mlo:mlr1594 branched-chain amino acid transferase YP_001778576.1 KEGG: bam:Bamb_4673 hypothetical protein YP_001778577.1 PFAM: RbsD or FucU transport; KEGG: bur:Bcep18194_B0335 RbsD or FucU transport associated protein YP_001778578.1 PFAM: DoxX family protein; KEGG: bur:Bcep18194_B0336 DoxX family membrane protein YP_001778579.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_3557 major facilitator superfamily MFS_1 YP_001778580.1 PFAM: Extracellular ligand-binding receptor; KEGG: bur:Bcep18194_B0339 ABC branched chain amino acid family transporter, periplasmic ligand binding protein YP_001778581.1 PFAM: helix-turn-helix- domain containing protein AraC type; PAS fold-4 domain protein; KEGG: bur:Bcep18194_B0341 transcriptional regulator, AraC family YP_001778582.1 KEGG: bvi:Bcep1808_3554 hypothetical protein YP_001778583.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; Xylose isomerase domain protein TIM barrel; KEGG: bur:Bcep18194_B0343 4-hydroxyphenylpyruvate dioxygenase YP_001778584.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis YP_001778585.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate YP_001778586.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0346 major facilitator superfamily (MFS_1) transporter YP_001778587.1 catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate YP_001778588.1 TIGRFAM: ABC transporter, periplasmic binding protein, thiB subfamily; 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bvi:Bcep1808_3548 ABC transporter, periplasmic binding protein, ThiB subfamily YP_001778589.1 KEGG: bur:Bcep18194_B0349 ABC transporter, ATPase subunit; TIGRFAM: 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_001778590.1 TIGRFAM: 2-aminoethylphosphonate ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0350 ABC transporter, inner membrane subunit YP_001778591.1 TIGRFAM: 2-aminoethylphosphonate ABC transport system, membrane component PhnV; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0351 ABC transporter, inner membrane subunit YP_001778592.1 TIGRFAM: phosphonoacetate hydrolase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: bam:Bamb_4657 phosphonoacetate hydrolase YP_001778593.1 TIGRFAM: phosphonoacetaldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B0353 aldehyde dehydrogenase YP_001778594.1 KEGG: bur:Bcep18194_B0354 HD phosphohydrolase-like YP_001778595.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0355 major facilitator superfamily (MFS_1) transporter YP_001778596.1 KEGG: bur:Bcep18194_B0356 hypothetical protein YP_001778597.1 PFAM: phosphate transporter; KEGG: bam:Bamb_4651 phosphate transporter YP_001778598.1 PFAM: Phosphoglycerate mutase; KEGG: bur:Bcep18194_B0358 phosphoglycerate/bisphosphoglycerate mutase YP_001778599.1 KEGG: bur:Bcep18194_B0359 hypothetical protein YP_001778600.1 KEGG: bur:Bcep18194_B0360 hypothetical protein YP_001778601.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0361 transcriptional regulator, LysR family YP_001778602.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine YP_001778603.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0365 major facilitator superfamily (MFS_1) transporter YP_001778604.1 TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bur:Bcep18194_B0366 putative agmatinase YP_001778605.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0367 transcriptional regulator, LysR family YP_001778606.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bvi:Bcep1808_3534 putative transcriptional regulator, AsnC family YP_001778607.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B0369 lysine exporter family protein (LysE/YggA) YP_001778608.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Peptidase S53 propeptide; KEGG: bam:Bamb_4640 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_001778609.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: bur:Bcep18194_B0371 peptidase S10, serine carboxypeptidase YP_001778610.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers YP_001778611.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_B0373 protein of unknown function DUF6, transmembrane YP_001778612.1 KEGG: bur:Bcep18194_B0374 hypothetical protein YP_001778613.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: bur:Bcep18194_B0375 transcriptional regulator, DeoR family YP_001778614.1 SMART: phospholipase D/Transphosphatidylase; KEGG: bur:Bcep18194_B0376 phospholipase D/transphosphatidylase YP_001778615.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_B0377 transcriptional regulator, TetR family YP_001778616.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B0378 FAD dependent oxidoreductase YP_001778617.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B0379 amino acid transporter YP_001778618.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B0380 aldehyde dehydrogenase YP_001778622.1 PFAM: Hemolysin-type calcium-binding region; KEGG: pde:Pden_2124 hemolysin-type calcium-binding region YP_001778623.1 KEGG: rso:RSp0292 probable cyclolysin-type secretion composite ATP-binding transmembrane ABC transporter protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase YP_001778624.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: rso:RS03671 probable hemolysin secretion-related transmembrane protein YP_001778625.1 PFAM: outer membrane efflux protein; KEGG: rso:RS03674 putative outer membrane channel lipoprotein YP_001778626.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bur:Bcep18194_B0381 MscS mechanosensitive ion channel YP_001778627.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0382 major facilitator superfamily (MFS_1) transporter YP_001778628.1 KEGG: bam:Bamb_4626 hypothetical protein YP_001778629.1 PFAM: porin Gram-negative type; KEGG: bam:Bamb_4625 porin, gram-negative type YP_001778630.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: bur:Bcep18194_B0386 inosine/uridine-preferring nucleoside hydrolase YP_001778631.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0387 transcriptional regulator, LysR family YP_001778632.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bur:Bcep18194_B0388 xanthine/uracil/vitamin C transporter YP_001778633.1 KEGG: bur:Bcep18194_B0389 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase YP_001778634.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bur:Bcep18194_B0392 peptidoglycan glycosyltransferase YP_001778635.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bur:Bcep18194_B0395 transcriptional regulator, GntR family with aminotransferase activity YP_001778636.1 PFAM: Negative transcriptional regulator; KEGG: bur:Bcep18194_B0396 negative transcriptional regulator YP_001778637.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bur:Bcep18194_B0397 hypothetical protein YP_001778638.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_B0398 two component transcriptional regulator, winged helix family YP_001778639.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_B0399 periplasmic sensor signal transduction histidine kinase YP_001778640.1 KEGG: bur:Bcep18194_B0400 alpha/beta hydrolase YP_001778641.1 PFAM: metallophosphoesterase; KEGG: bur:Bcep18194_B0401 metallophosphoesterase YP_001778642.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0402 GCN5-related N-acetyltransferase YP_001778643.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B0403 lysine exporter family protein (LysE/YggA) YP_001778644.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B0404 outer membrane protein (porin) YP_001778645.1 KEGG: bur:Bcep18194_B0407 hypothetical protein YP_001778646.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bur:Bcep18194_B0414 TonB-dependent siderophore receptor YP_001778647.1 KEGG: bur:Bcep18194_B0415 hypothetical protein YP_001778648.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bam:Bamb_4592 ferredoxin YP_001778649.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bam:Bamb_4591 vanillate monooxygenase YP_001778650.1 PFAM: regulatory protein MarR; KEGG: bam:Bamb_4590 transcriptional regulator, MarR family YP_001778651.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_B0422 transcriptional regulator, TetR family YP_001778652.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bam:Bamb_4588 acyl-CoA dehydrogenase domain protein YP_001778653.1 PFAM: carboxyl transferase; KEGG: bur:Bcep18194_B0424 propionyl-CoA carboxylase YP_001778654.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001778655.1 PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: bur:Bcep18194_B0426 carbamoyl-phosphate synthase L chain, ATP-binding YP_001778656.1 KEGG: bur:Bcep18194_B0427 hypothetical protein YP_001778657.1 KEGG: bur:Bcep18194_B0428 phosphoesterase; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756 YP_001778658.1 KEGG: bur:Bcep18194_B0430 hypothetical protein YP_001778659.1 KEGG: bur:Bcep18194_B0432 hypothetical protein YP_001778660.1 PFAM: EAL domain protein; KEGG: bur:Bcep18194_B0433 diguanylate phosphodiesterase (EAL domain) YP_001778661.1 KEGG: bur:Bcep18194_B0434 hypothetical protein YP_001778662.1 TIGRFAM: methyltransferase FkbM family; KEGG: bur:Bcep18194_B0435 methyltransferase FkbM family YP_001778663.1 KEGG: bur:Bcep18194_B0436 hypothetical protein YP_001778664.1 KEGG: bvi:Bcep1808_3486 hypothetical protein YP_001778665.1 KEGG: bvi:Bcep1808_3485 hypothetical protein YP_001778666.1 KEGG: bur:Bcep18194_B0439 hypothetical protein YP_001778667.1 PFAM: OmpA/MotB domain protein; KEGG: bur:Bcep18194_B0440 outer membrane protein, OmpA/MotB family YP_001778668.1 PFAM: Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bur:Bcep18194_B0441 outer membrane protein, haemagluttinin-like YP_001778669.1 KEGG: bur:Bcep18194_B0443 hypothetical protein YP_001778670.1 KEGG: scl:sce8484 DNA binding protein YP_001778671.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bvi:Bcep1808_3134 AAA ATPase, central domain protein YP_001778672.1 SMART: helix-turn-helix domain protein; KEGG: smd:Smed_3219 transcriptional regulator, XRE family YP_001778674.1 PFAM: transposase IS3/IS911 family protein; KEGG: bte:BTH_I1931 transposase YP_001778675.1 PFAM: Integrase catalytic region; KEGG: bte:BTH_I1930 transposase YP_001778676.1 PFAM: Integrase catalytic region; KEGG: shn:Shewana3_3862 integrase, catalytic region YP_001778677.1 KEGG: vpa:VPA1394 putative transposition protein YP_001778678.1 KEGG: rme:Rmet_3363 hypothetical protein YP_001778679.1 KEGG: mlo:mll9366 hypothetical protein YP_001778680.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bvi:Bcep1808_5545 histone family protein nucleoid-structuring protein H-NS YP_001778681.1 PFAM: KAP P-loop domain protein; KEGG: xcb:XC_2443 hypothetical protein YP_001778682.1 KEGG: xcb:XC_2442 hypothetical protein YP_001778684.1 PFAM: Integrase catalytic region; KEGG: pol:Bpro_5204 integrase, catalytic region YP_001778685.1 PFAM: transposase IS3/IS911 family protein; KEGG: pol:Bpro_5203 transposase IS3/IS911 YP_001778686.1 KEGG: rme:Rmet_2166 hypothetical protein YP_001778687.1 PFAM: TatD-related deoxyribonuclease; KEGG: rme:Rmet_2167 TatD-related deoxyribonuclease YP_001778688.1 PFAM: FRG domain protein; KEGG: bam:Bamb_6563 hypothetical protein YP_001778689.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: mex:Mext_0208 ThiJ/PfpI domain protein YP_001778690.1 PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO0451 conserved hypothetical protein; putative alpha/beta hydrolase YP_001778691.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bvi:Bcep1808_3959 short-chain dehydrogenase/reductase SDR YP_001778692.1 PFAM: major facilitator superfamily MFS_1; KEGG: azc:AZC_1386 putative transmembrane efflux protein YP_001778693.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: bur:Bcep18194_C7058 alkylhydroperoxidase like protein YP_001778695.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: pfo:Pfl_2717 transcriptional regulator, AraC family YP_001778696.1 KEGG: bte:BTH_II0087 transposase YP_001778697.1 KEGG: bmu:Bmul_5178 hypothetical protein YP_001778698.1 TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: reu:Reut_A1741 fungal/archaeal/bacterial haem catalase/peroxidase YP_001778699.1 PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B1809 non-heme chloroperoxidase YP_001778700.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_3953 transcriptional regulator, LysR family YP_001778701.1 PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: bxe:Bxe_B2987 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001778702.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bur:Bcep18194_B1603 (2Fe-2S)-binding protein YP_001778703.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bur:Bcep18194_B1602 aldehyde oxidase YP_001778704.1 PFAM: cytochrome c class I; KEGG: bur:Bcep18194_B1601 cytochrome c, class I YP_001778706.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: bvi:Bcep1808_3961 transport-associated YP_001778707.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_3953 transcriptional regulator, LysR family YP_001778708.1 PFAM: response regulator receiver; KEGG: bvi:Bcep1808_3954 response regulator receiver protein YP_001778709.1 KEGG: bvi:Bcep1808_3955 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001778710.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bvi:Bcep1808_3956 response regulator receiver protein YP_001778711.1 PFAM: major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_3957 major facilitator superfamily MFS_1 YP_001778712.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: bmu:Bmul_5175 pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_001778714.1 PFAM: Integrase catalytic region; KEGG: bte:BTH_I1930 transposase YP_001778715.1 PFAM: transposase IS3/IS911 family protein; KEGG: bte:BTH_I1931 transposase YP_001778718.1 KEGG: nmu:NmulC_2781 protein of unknown function DUF955 YP_001778719.1 PFAM: helix-turn-helix domain protein; KEGG: nmu:NmulC_2782 helix-turn-helix motif YP_001778721.1 KEGG: bur:Bcep18194_B0444 hypothetical protein YP_001778722.1 PFAM: NADPH-dependent FMN reductase; KEGG: bvi:Bcep1808_3476 NADPH-dependent FMN reductase YP_001778723.1 PFAM: NIPSNAP family containing protein; KEGG: bvi:Bcep1808_3475 NIPSNAP family containing protein YP_001778724.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0448 GCN5-related N-acetyltransferase YP_001778725.1 KEGG: bur:Bcep18194_B0452 hypothetical protein YP_001778726.1 KEGG: bur:Bcep18194_B0453 membrane protein-like YP_001778727.1 KEGG: bam:Bamb_4567 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_001778728.1 TIGRFAM: choline ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0456 ABC glycine betaine/L-proline transporter, inner membrane subunit YP_001778729.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_B0457 transcriptional regulator, AraC family YP_001778730.1 TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bur:Bcep18194_B0458 ABC proline/glycine betaine transporter, periplasmic ligand binding protein YP_001778731.1 PFAM: protein of unknown function UPF0126; KEGG: pfo:Pfl_3420 hypothetical protein YP_001778732.1 PFAM: transmembrane pair domain protein; KEGG: bur:Bcep18194_B0461 membrane protein YP_001778733.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0462 transcriptional regulator, LysR family YP_001778734.1 KEGG: bur:Bcep18194_B0463 glycosyl hydrolase YP_001778735.1 KEGG: bur:Bcep18194_B0464 hypothetical protein YP_001778736.1 PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: bam:Bamb_4559 aspartyl/asparaginyl beta-hydroxylase YP_001778737.1 KEGG: bur:Bcep18194_B0467 hypothetical protein YP_001778738.1 KEGG: bur:Bcep18194_B0468 hypothetical protein YP_001778739.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: bur:Bcep18194_B0473 NAD-dependent epimerase/dehydratase YP_001778740.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bur:Bcep18194_B0474 hydroxypyruvate isomerase YP_001778741.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0475 major facilitator superfamily (MFS_1) transporter YP_001778742.1 PFAM: class II aldolase/adducin family protein; KEGG: bur:Bcep18194_B0476 putative aldolase YP_001778743.1 PFAM: type III effector Hrp-dependent outers; KEGG: bur:Bcep18194_B0477 type III effector Hrp-dependent outer proteins YP_001778744.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bur:Bcep18194_B0478 3-hydroxyisobutyrate dehydrogenase YP_001778745.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bam:Bamb_4549 GntR domain protein YP_001778746.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bam:Bamb_4548 transcriptional regulator, AraC family YP_001778747.1 KEGG: bur:Bcep18194_B0485 iron-sulfur-dependent L-serine dehydratase single chain form; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_001778748.1 TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: bam:Bamb_4546 sarcosine oxidase, beta subunit family YP_001778749.1 PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: bmu:Bmul_3505 sarcosine oxidase delta subunit heterotetrameric YP_001778750.1 TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glycine cleavage T-protein barrel; KEGG: bur:Bcep18194_B0488 sarcosine oxidase, alpha subunit, heterotetrameric YP_001778751.1 PFAM: Sarcosine oxidase gamma subunit; KEGG: bur:Bcep18194_B0489 sarcosine oxidase, gamma subunit YP_001778752.1 KEGG: bvi:Bcep1808_3455 dihydroneopterin aldolase YP_001778753.1 PFAM: helix-turn-helix domain protein; KEGG: bam:Bamb_4541 transcriptional regulator, XRE family YP_001778754.1 TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: bam:Bamb_4540 HipA domain protein YP_001778755.1 PFAM: Lytic transglycosylase catalytic; KEGG: bam:Bamb_4539 lytic transglycosylase, catalytic YP_001778756.1 KEGG: sco:SCO2860 rifampin ADP-ribosyl transferase YP_001778757.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0496 ABC proline/glycine betaine transporter, inner membrane subunit YP_001778758.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_B0497 ABC proline/glycine betaine transporter, ATPase subunit YP_001778759.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0498 ABC proline/glycine betaine transporter, inner membrane subunit YP_001778760.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bur:Bcep18194_B0499 ABC glycine betaine/choline transporter, periplasmic ligand binding protein YP_001778761.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bur:Bcep18194_B0500 2-hydroxyacid dehydrogenase YP_001778762.1 PFAM: NUDIX hydrolase; KEGG: stp:Strop_1988 NUDIX hydrolase YP_001778763.1 catalyzes the removal of N-terminal dipeptides when proline is the penultimate residue YP_001778764.1 KEGG: bur:Bcep18194_B0506 hypothetical protein YP_001778765.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: bur:Bcep18194_B0507 lipoprotein releasing system, transmembrane protein, LolC/E family YP_001778766.1 PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: bur:Bcep18194_B0508 alpha-2-macroglobulin-like large extracellular alpha-helical protein YP_001778767.1 TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; KEGG: bur:Bcep18194_B0509 penicillin-binding protein 1C YP_001778768.1 PFAM: chemotaxis sensory transducer; KEGG: bxe:Bxe_A1954 methyl-accepting chemotaxis sensory transducer YP_001778769.1 KEGG: bam:Bamb_6157 porin, gram-negative type YP_001778770.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA YP_001778771.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: bvi:Bcep1808_6565 RNA polymerase, sigma 70 subunit, RpoD family YP_001778772.1 PFAM: High potential iron-sulfur protein; KEGG: bam:Bamb_6160 high potential iron-sulfur protein YP_001778773.1 SMART: extracellular solute-binding protein family 3; KEGG: bvi:Bcep1808_6563 cytochrome c, class I YP_001778774.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: bvi:Bcep1808_6562 pyrrolo-quinoline quinone YP_001778775.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bxe:Bxe_B2473 putative TonB-dependent siderophore receptor YP_001778776.1 PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_6163 prolyl aminopeptidase YP_001778777.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: bam:Bamb_6164 GAF modulated sigma54 specific transcriptional regulator, fis family YP_001778778.1 possibly involved in transport of pyrroloquinoline quinone transport YP_001778779.1 Required in the synthesis of PPQ, but its exact function is unknown YP_001778780.1 PFAM: coenzyme PQQ synthesis D; KEGG: bvi:Bcep1808_6555 coenzyme PQQ synthesis D YP_001778781.1 KEGG: bvi:Bcep1808_6554 pyrroloquinoline quinone biosynthesis protein PqqE; TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_001778782.1 KEGG: bur:Bcep18194_B0517 hypothetical protein YP_001778783.1 KEGG: bur:Bcep18194_B0518 hypothetical protein YP_001778784.1 KEGG: bam:Bamb_4529 hypothetical protein YP_001778785.1 PFAM: putative esterase; KEGG: bur:Bcep18194_B0523 putative esterase YP_001778786.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B0524 alpha/beta hydrolase YP_001778787.1 KEGG: bvi:Bcep1808_3443 hypothetical protein YP_001778788.1 PFAM: DGPFAETKE family protein; KEGG: bam:Bamb_4525 DGPFAETKE family protein YP_001778789.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: bam:Bamb_4524 PAS/PAC sensor hybrid histidine kinase YP_001778790.1 KEGG: bvi:Bcep1808_3440 hypothetical protein YP_001778791.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0539 major facilitator superfamily (MFS_1) transporter YP_001778792.1 PFAM: ABC-2 type transporter; KEGG: bur:Bcep18194_B0540 ABC transporter, inner membrane subunit YP_001778793.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_B0541 ABC transporter, ATPase subunit YP_001778794.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_B0543 hypothetical protein YP_001778795.1 KEGG: bvi:Bcep1808_3436 hypothetical protein YP_001778796.1 KEGG: bam:Bamb_4516 hypothetical protein YP_001778797.1 PFAM: OmpW family protein; KEGG: bam:Bamb_4515 OmpW family protein YP_001778798.1 KEGG: bur:Bcep18194_B0547 hypothetical protein YP_001778800.1 KEGG: bur:Bcep18194_B0549 hypothetical protein YP_001778801.1 catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine YP_001778802.1 catalyzes the formation of betaine from betaine aldehyde YP_001778803.1 HTH-type; bet1; Repressor involved in choline regulation of the bet genes YP_001778804.1 KEGG: bur:Bcep18194_B0556 alpha/beta hydrolase YP_001778805.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: bur:Bcep18194_B0557 isoprenylcysteine carboxyl methyltransferase YP_001778806.1 PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl transferase family 28; KEGG: bur:Bcep18194_B0558 glycosyl transferase, family 28 YP_001778807.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0559 drug resistance transporter EmrB/QacA subfamily YP_001778808.1 TIGRFAM: rhamnosyltransferase; KEGG: bur:Bcep18194_B0560 rhamnosyltransferase YP_001778809.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B0561 RND efflux system, outer membrane lipoprotein, NodT family YP_001778810.1 PFAM: secretion protein HlyD family protein; KEGG: bur:Bcep18194_B0562 secretion protein, HlyD family YP_001778811.1 TIGRFAM: formaldehyde dehydrogenase, glutathione-independent; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_B0564 zinc-containing alcohol dehydrogenase superfamily YP_001778812.1 KEGG: bur:Bcep18194_B0567 hypothetical protein YP_001778813.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bur:Bcep18194_B0568 transcriptional regulator, GntR family with aminotransferase activity YP_001778814.1 PFAM: coagulation factor 5/8 type domain protein; WD40 domain protein beta Propeller; KEGG: bur:Bcep18194_B0569 putative secreted protein YP_001778815.1 KEGG: reu:Reut_A2935 hypothetical protein YP_001778816.1 KEGG: bvi:Bcep1808_2388 hypothetical protein YP_001778818.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_B0570 transcriptional regulator, AraC family YP_001778819.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_001778820.1 PFAM: peptidase M19 renal dipeptidase; KEGG: bvi:Bcep1808_3422 membrane dipeptidase YP_001778821.1 PFAM: 4-vinyl reductase 4VR; KEGG: bur:Bcep18194_B0573 4-vinyl reductase, 4VR YP_001778822.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B0574 NADH-flavin oxidoreductase/NADH oxidase YP_001778823.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bur:Bcep18194_B0575 hypothetical protein YP_001778824.1 PFAM: Electron transfer flavoprotein alpha subunit; KEGG: bur:Bcep18194_B0576 electron transfer flavoprotein, alpha subunit YP_001778825.1 KEGG: bur:Bcep18194_B0577 electron transfer flavoprotein beta-subunit YP_001778826.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bur:Bcep18194_B0578 Rieske (2Fe-2S) protein YP_001778827.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bvi:Bcep1808_3415 oxidoreductase FAD-binding domain protein YP_001778828.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bam:Bamb_4488 substrate-binding region of ABC-type glycine betaine transport system YP_001778829.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B0581 amino acid transporter YP_001778830.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine YP_001778831.1 TIGRFAM: choline sulfate-utilization transcription factor; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0586 transcriptional regulator, LysR family YP_001778832.1 TIGRFAM: choline-sulfatase; PFAM: sulfatase; KEGG: bur:Bcep18194_B0587 sulfatase YP_001778833.1 TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bur:Bcep18194_B0588 ABC proline/glycine betaine transporter, periplasmic ligand binding protein YP_001778834.1 PFAM: porin Gram-negative type; KEGG: bvi:Bcep1808_3408 porin, gram-negative type YP_001778835.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0591 hypothetical protein YP_001778836.1 PFAM: protein of unknown function DUF74; KEGG: bvi:Bcep1808_3406 protein of unknown function DUF74 YP_001778837.1 PFAM: peptidase M20; peptidase M28; KEGG: bur:Bcep18194_B0596 leucyl aminopeptidase YP_001778838.1 PFAM: Propeptide peptidase M4 and M36; KEGG: bur:Bcep18194_B0597 propeptide, peptidase M4 and M36 YP_001778839.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_B0599 transcriptional regulator, AraC family YP_001778840.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_4473 transcriptional regulator, AraC family YP_001778841.1 PFAM: methylamine dehydrogenase heavy subunit; KEGG: bur:Bcep18194_B0601 amine dehydrogenase YP_001778842.1 KEGG: bur:Bcep18194_B0602 hypothetical protein YP_001778843.1 TIGRFAM: methylamine dehydrogenase accessory protein MauD; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bur:Bcep18194_B0603 hypothetical protein YP_001778844.1 PFAM: methylamine dehydrogenase light chain domain protein; KEGG: bam:Bamb_4469 amine dehydrogenase YP_001778845.1 PFAM: cytochrome c class I; KEGG: bam:Bamb_4468 cytochrome c, class I YP_001778846.1 KEGG: bur:Bcep18194_B0606 cytochrome c, class I YP_001778847.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B0607 aldehyde dehydrogenase (NAD+) YP_001778848.1 PFAM: protein of unknown function DUF606; KEGG: bur:Bcep18194_B0608 protein of unknown function DUF606 YP_001778849.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0609 transcriptional regulator, LysR family YP_001778851.1 TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bur:Bcep18194_B0611 ABC proline/glycine betaine transporter, periplasmic ligand binding protein YP_001778852.1 PFAM: protein of unknown function DUF849; KEGG: bur:Bcep18194_B0612 protein of unknown function DUF849 YP_001778853.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA YP_001778854.1 KEGG: bur:Bcep18194_B0614 thioesterase-like YP_001778855.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bur:Bcep18194_B0615 lipolytic enzyme YP_001778856.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bur:Bcep18194_B0616 gamma-butyrobetaine,2-oxoglutarate dioxygenase YP_001778857.1 KEGG: bur:Bcep18194_B0617 hypothetical protein YP_001778858.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B0618 short-chain dehydrogenase/reductase SDR YP_001778859.1 KEGG: bur:Bcep18194_B0619 hypothetical protein YP_001778860.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B0620 short-chain dehydrogenase/reductase SDR YP_001778861.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bur:Bcep18194_B0621 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_001778862.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bur:Bcep18194_B0622 mandelate racemase/muconate lactonizing enzyme YP_001778863.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_4448 short-chain dehydrogenase/reductase SDR YP_001778864.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_B0624 ABC sugar transporter, ATPase subunit YP_001778865.1 PFAM: inner-membrane translocator; KEGG: bam:Bamb_4446 inner-membrane translocator YP_001778866.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_B0626 ABC sugar transporter, periplasmic ligand binding protein YP_001778867.1 PFAM: amidohydrolase 2; KEGG: bam:Bamb_4444 amidohydrolase 2 YP_001778868.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bur:Bcep18194_B0628 transcriptional regulator, GntR family YP_001778869.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: rle:RL0444 putative lactate dehydrogenase YP_001778870.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B0629 FAD dependent oxidoreductase YP_001778871.1 PFAM: Amidase; KEGG: bam:Bamb_4441 amidase YP_001778872.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_4440 major facilitator superfamily MFS_1 YP_001778873.1 PFAM: amidohydrolase; D-aminoacylase domain protein; Amidohydrolase 3; KEGG: bam:Bamb_4439 N-acyl-D-amino-acid deacylase YP_001778874.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4438 transcriptional regulator, LysR family YP_001778875.1 KEGG: bur:Bcep18194_B0643 hypothetical protein YP_001778876.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: bur:Bcep18194_B0644 diguanylate cyclase (GGDEF domain) YP_001778877.1 PFAM: OmpA/MotB domain protein; KEGG: bam:Bamb_4435 OmpA/MotB domain protein YP_001778878.1 TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: bur:Bcep18194_B0646 rhs element Vgr protein YP_001778879.1 PFAM: Domain of unknown function DUF1795; KEGG: rso:RS05481 hypothetical protein YP_001778880.1 TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; PAAR repeat-containing protein; KEGG: rso:RS05482 putative rhs-related transmembrane protein YP_001778881.1 KEGG: bur:Bcep18194_B1335 hypothetical protein YP_001778882.1 KEGG: ppu:PP_4094 hypothetical protein YP_001778884.1 KEGG: bur:Bcep18194_B0650 hypothetical protein YP_001778885.1 PFAM: Extracellular ligand-binding receptor; KEGG: bur:Bcep18194_B0651 ABC branched chain amino acid family transporter, periplasmic ligand binding protein YP_001778886.1 PFAM: inner-membrane translocator; KEGG: bam:Bamb_4431 inner-membrane translocator YP_001778887.1 Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine YP_001778888.1 Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine YP_001778889.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_4428 ABC transporter related YP_001778890.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4427 transcriptional regulator, LysR family YP_001778891.1 KEGG: bmu:Bmul_3629 hypothetical protein YP_001778892.1 KEGG: bmu:Bmul_3630 hypothetical protein YP_001778893.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bam:Bamb_4424 protein of unknown function DUF6, transmembrane YP_001778894.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_B0660 glyoxalase/bleomycin resistance protein/dioxygenase YP_001778895.1 KEGG: bam:Bamb_4422 hypothetical protein YP_001778896.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: bam:Bamb_4421 transcriptional regulator, AraC family YP_001778897.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B0661 transcriptional regulator, AraC family YP_001778898.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_4419 short-chain dehydrogenase/reductase SDR YP_001778899.1 PFAM: aminotransferase class-III; KEGG: bur:Bcep18194_B0665 aminotransferase class-III YP_001778900.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0666 transcriptional regulator, LysR family YP_001778901.1 involved in the conversion of chorismate to salicylate YP_001778902.1 catalyzes the second reaction in the pyochelin biosynthetic pathway, the conversion of isochorismate to salicylate and pyruvate. YP_001778903.1 PFAM: Thioesterase; KEGG: bur:Bcep18194_B0669 thioesterase YP_001778904.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_B0670 AMP-dependent synthetase and ligase YP_001778905.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B0671 transcriptional regulator, AraC family YP_001778906.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Methyltransferase type 12; Non-ribosomal peptide synthetase; KEGG: bur:Bcep18194_B0672 non-ribosomal peptide synthetase modules YP_001778907.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; Methyltransferase type 12; Non-ribosomal peptide synthetase; KEGG: bur:Bcep18194_B0673 non-ribosomal peptide synthetase modules YP_001778908.1 TIGRFAM: thiazolinyl imide reductase; PFAM: oxidoreductase domain protein; KEGG: bur:Bcep18194_B0674 thiazolinyl imide reductase YP_001778909.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_B0675 ABC efflux pump, fused inner membrane and ATPase subunits YP_001778910.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_B0676 ABC efflux pump, fused inner membrane and ATPase subunits YP_001778911.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bur:Bcep18194_B0677 TonB-dependent siderophore receptor YP_001778912.1 KEGG: bur:Bcep18194_B0678 hypothetical protein YP_001778913.1 PFAM: PepSY-associated TM helix domain protein; KEGG: bur:Bcep18194_B0679 hypothetical protein YP_001778914.1 TIGRFAM: siderophore transporter, RhtX/FptX family; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0680 major facilitator superfamily (MFS_1) transporter YP_001778915.1 PFAM: major facilitator superfamily MFS_1; KEGG: bmu:Bmul_3894 major facilitator superfamily MFS_1 YP_001778916.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_3948 transcriptional regulator, LysR family YP_001778917.1 SMART: tyrosine protein kinase; serine/threonine protein kinase; leucine-rich repeat-containing protein typical subtype; KEGG: bur:Bcep18194_B0691 serine/threonine protein kinase YP_001778918.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B0692 lysine exporter family protein (LysE/YggA) YP_001778919.1 KEGG: bvi:Bcep1808_3357 hypothetical protein YP_001778920.1 PFAM: protein of unknown function DUF461; KEGG: bur:Bcep18194_B0693 protein of unknown function DUF461 YP_001778921.1 PFAM: copper resistance protein CopC; KEGG: bur:Bcep18194_B0694 copper resistance protein CopC YP_001778922.1 KEGG: bur:Bcep18194_B0695 hypothetical protein YP_001778923.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bur:Bcep18194_B0696 hypothetical protein YP_001778924.1 PFAM: ferredoxin; KEGG: bam:Bamb_4404 ferredoxin YP_001778925.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_B0698 sigma54 specific transcriptional regulator with GAF sensor, fis family YP_001778926.1 KEGG: bur:Bcep18194_B0699 hypothetical protein YP_001778927.1 KEGG: bur:Bcep18194_B0700 hypothetical protein YP_001778928.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_B0701 TPR repeat protein YP_001778929.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: bam:Bamb_4396 xanthine/uracil/vitamin C permease YP_001778930.1 KEGG: bur:Bcep18194_B0704 hypothetical protein YP_001778931.1 KEGG: bur:Bcep18194_B0705 hypothetical protein YP_001778932.1 KEGG: bur:Bcep18194_B0707 hypothetical protein YP_001778933.1 KEGG: bur:Bcep18194_B0708 metal-dependent hydrolase YP_001778934.1 PFAM: alpha/beta hydrolase fold; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B0709 short chain dehydrogenase YP_001778935.1 KEGG: bur:Bcep18194_B0710 hypothetical protein YP_001778936.1 KEGG: bvi:Bcep1808_3341 hypothetical protein YP_001778937.1 PFAM: band 7 protein; KEGG: bur:Bcep18194_B0711 membrane protease YP_001778938.1 PFAM: protein of unknown function DUF107; KEGG: bur:Bcep18194_B0712 membrane-bound serine protease YP_001778939.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B0713 transcriptional regulator, AraC family YP_001778940.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_B0714 acyl-CoA dehydrogenase YP_001778941.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_B0715 AMP-dependent synthetase and ligase YP_001778942.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_4383 methylmalonate-semialdehyde dehydrogenase YP_001778943.1 KEGG: bur:Bcep18194_B0717 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding YP_001778944.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001778945.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bur:Bcep18194_B0719 enoyl-CoA hydratase/isomerase YP_001778946.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmu:Bmul_3662 transcriptional regulator, LysR family YP_001778947.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0722 major facilitator superfamily (MFS_1) transporter YP_001778948.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B0723 RND efflux system, outer membrane lipoprotein, NodT family YP_001778949.1 PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: bur:Bcep18194_B0724 hypothetical protein YP_001778950.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bur:Bcep18194_B0725 secretion protein, HlyD family YP_001778951.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bam:Bamb_4377 metal-dependent phosphohydrolase YP_001778952.1 KEGG: bur:Bcep18194_B0729 transcriptional regulator, XRE family YP_001778953.1 KEGG: bam:Bamb_4374 hypothetical protein YP_001778954.1 KEGG: bur:Bcep18194_B0732 hypothetical protein YP_001778955.1 PFAM: ribonuclease T2; KEGG: bur:Bcep18194_B0733 ribonuclease T2 YP_001778956.1 PFAM: isochorismatase hydrolase; KEGG: bur:Bcep18194_B0745 isochorismatase hydrolase YP_001778957.1 KEGG: bam:Bamb_6114 hypothetical protein YP_001778958.1 KEGG: bur:Bcep18194_B0513 alpha/beta hydrolase YP_001778960.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_B0904 hypothetical protein YP_001778961.1 PFAM: Integrase catalytic region; KEGG: pol:Bpro_5204 integrase, catalytic region YP_001778962.1 PFAM: transposase IS3/IS911 family protein; KEGG: pol:Bpro_5203 transposase IS3/IS911 YP_001778963.1 KEGG: bur:Bcep18194_B0749 hypothetical protein YP_001778964.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mtc:MT2323 short chain dehydrogenase YP_001778965.1 catalyzes the formation of glutamate from glutamine YP_001778966.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_B0752 two component transcriptional regulator, winged helix family YP_001778967.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_B0753 periplasmic sensor signal transduction histidine kinase YP_001778968.1 PFAM: Patatin; surface antigen variable number repeat protein; KEGG: bur:Bcep18194_B0755 patatin YP_001778969.1 TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: bur:Bcep18194_B0756 cell shape determining protein MreB/Mrl YP_001778970.1 PFAM: protein of unknown function DUF218; KEGG: bur:Bcep18194_B0757 protein of unknown function DUF218 YP_001778971.1 TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; Haemagluttinin repeat-containing protein; KEGG: bam:Bamb_4364 outer membrane autotransporter barrel domain YP_001778972.1 PFAM: Amylo-alpha-16-glucosidase; KEGG: bur:Bcep18194_B0759 amylo-alpha-1,6-glucosidase YP_001778973.1 KEGG: bur:Bcep18194_B0760 hypothetical protein YP_001778974.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4361 transcriptional regulator, LysR family YP_001778975.1 PFAM: penicillin-binding protein transpeptidase; beta-lactamase; KEGG: bur:Bcep18194_B0762 beta-lactamase YP_001778976.1 KEGG: bur:Bcep18194_B0763 hypothetical protein YP_001778977.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bur:Bcep18194_B0764 antibiotic biosynthesis monooxygenase YP_001778978.1 PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_B0765 transcriptional regulator, MarR family YP_001778979.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_B0767 periplasmic sensor signal transduction histidine kinase YP_001778980.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_B0768 two component transcriptional regulator, winged helix family YP_001778981.1 PFAM: conserved hypothetical protein; KEGG: bam:Bamb_4355 conserved hypothetical protein 156 YP_001778982.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bur:Bcep18194_B0770 transcriptional regulator, RpiR family YP_001778983.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0771 GCN5-related N-acetyltransferase YP_001778984.1 KEGG: bur:Bcep18194_B0772 hypothetical protein YP_001778985.1 KEGG: bur:Bcep18194_B0773 PEP phosphonomutase YP_001778986.1 KEGG: bur:Bcep18194_B0774 hypothetical protein YP_001778987.1 KEGG: bur:Bcep18194_B0775 cytochrome P450-like YP_001778988.1 KEGG: bur:Bcep18194_B0776 hypothetical protein YP_001778989.1 PFAM: Rhodanese domain protein; KEGG: bur:Bcep18194_B0777 rhodanese-like protein YP_001778990.1 upregulated by FixLJ/FixK under oxygen limitation; involved in regulation of genes involved in carbon and amino acid metabolism YP_001778991.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bur:Bcep18194_B0781 2-nitropropane dioxygenase, NPD YP_001778992.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bam:Bamb_4342 peptidase M20 YP_001778993.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: bur:Bcep18194_B0783 malate/L-lactate dehydrogenase YP_001778994.1 PFAM: TfoX domain protein; KEGG: bur:Bcep18194_B0784 TfoX-like protein YP_001778995.1 PFAM: NnrUfamily protein; KEGG: bur:Bcep18194_B0785 membrane protein, NnrU-like YP_001778996.1 PFAM: Spore germination protein; amino acid permease-associated region; KEGG: bur:Bcep18194_B0786 amino acid transporter YP_001778997.1 PFAM: protein of unknown function DUF81; KEGG: bam:Bamb_4338 protein of unknown function DUF81 YP_001778998.1 PFAM: protein of unknown function DUF1130; KEGG: bam:Bamb_4337 protein of unknown function DUF1130 YP_001778999.1 KEGG: bur:Bcep18194_B0794 hypothetical protein YP_001779000.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B0802 FAD dependent oxidoreductase YP_001779001.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_B0803 transcriptional regulator, XRE family YP_001779002.1 PFAM: glutamine synthetase catalytic region; KEGG: bur:Bcep18194_B0804 glutamine synthetase, catalytic region YP_001779003.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B0809 monooxygenase, FAD-binding YP_001779004.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0810 transcriptional regulator, LysR family YP_001779005.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0811 GCN5-related N-acetyltransferase YP_001779006.1 KEGG: bur:Bcep18194_B0812 hypothetical protein YP_001779007.1 PFAM: protein of unknown function DUF1311; KEGG: bur:Bcep18194_B0813 protein of unknown function DUF1311 YP_001779008.1 PFAM: cell wall hydrolase/autolysin; KEGG: bur:Bcep18194_B0814 cell wall hydrolase/autolysin YP_001779009.1 KEGG: bur:Bcep18194_B0815 hypothetical protein YP_001779010.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine YP_001779011.1 PFAM: protein of unknown function DUF350; KEGG: bur:Bcep18194_B0817 protein of unknown function DUF350 YP_001779012.1 PFAM: band 7 protein; KEGG: bam:Bamb_4271 putative virion core protein YP_001779013.1 KEGG: bur:Bcep18194_B0819 hypothetical protein YP_001779014.1 TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related; KEGG: bam:Bamb_4269 S-adenosylmethionine decarboxylase related YP_001779015.1 KEGG: bur:Bcep18194_B0824 hypothetical protein YP_001779016.1 NadM-Nudix subfamily; involved in creation of nicotanimide adenine dinucleotide NAD from either biosynthetic or salvage pathways YP_001779017.1 PFAM: Nicotinate phosphoribosyltransferase-like; KEGG: bur:Bcep18194_B0826 hypothetical protein YP_001779018.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bam:Bamb_4265 transcriptional regulator, GntR family YP_001779019.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_B0829 protein of unknown function DUF6, transmembrane YP_001779020.1 catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding YP_001779021.1 activates the transcription of the lysA gene encoding diaminopimelate decarboxylase YP_001779022.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_4244 GCN5-related N-acetyltransferase YP_001779023.1 KEGG: bur:Bcep18194_B0840 hypothetical protein YP_001779024.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bur:Bcep18194_B0841 haloacid dehalogenase-like hydrolase YP_001779025.1 TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB; KEGG: bur:Bcep18194_B0843 addiction module toxin, Txe/YoeB YP_001779026.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: bur:Bcep18194_B0844 prevent-host-death protein YP_001779027.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_4241 GCN5-related N-acetyltransferase YP_001779028.1 PFAM: protein of unknown function DUF1653; KEGG: bur:Bcep18194_B0846 hypothetical protein YP_001779029.1 TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: bvi:Bcep1808_5361 ATP synthase F1, epsilon subunit YP_001779030.1 KEGG: bvi:Bcep1808_5360 ATP synthase F1, gamma subunit; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit YP_001779031.1 catalyzes the formation of acetyl phosphate from acetyl-CoA and phosphate; can also act with other short-chain acyl-CoAs YP_001779032.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: bvi:Bcep1808_5357 acetate kinase YP_001779033.1 PFAM: alpha/beta hydrolase fold; PHB de-polymerase domain protein; KEGG: bvi:Bcep1808_5356 PHB de-polymerase domain protein YP_001779034.1 Catalyzes a key regulatory step in fatty acid biosynthesis YP_001779035.1 PFAM: protein of unknown function DUF1006; KEGG: bur:Bcep18194_B0847 protein of unknown function DUF1006 YP_001779036.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_4238 major facilitator superfamily MFS_1 YP_001779037.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_B0850 transcriptional regulator, TetR family YP_001779038.1 PFAM: glycoside hydrolase family 37; KEGG: bur:Bcep18194_B0851 alpha,alpha-trehalase YP_001779039.1 PFAM: Carbohydrate-selective porin OprB; KEGG: bur:Bcep18194_B0852 carbohydrate-selective porin OprB YP_001779040.1 KEGG: bur:Bcep18194_B0853 hypothetical protein YP_001779041.1 KEGG: bmu:Bmul_3735 hypothetical protein YP_001779042.1 KEGG: bur:Bcep18194_B0855 Mn2+ and Fe2+ transporters of the NRAMP family YP_001779043.1 PFAM: regulatory protein LuxR; KEGG: bur:Bcep18194_B0856 transcriptional regulator, LuxR family YP_001779044.1 PFAM: regulatory protein LuxR; KEGG: bur:Bcep18194_B0857 transcriptional regulator, LuxR family YP_001779045.1 PFAM: type III secretion FHIPEP protein; KEGG: bam:Bamb_4230 type III secretion FHIPEP protein YP_001779046.1 TIGRFAM: type III secretion protein, HrpO family; PFAM: export protein FliQ family 3; KEGG: bmu:Bmul_3740 type III secretion protein, HrpO family YP_001779047.1 TIGRFAM: type III secretion outer membrane pore, YscC/HrcC family; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: bam:Bamb_4228 type III secretion outer membrane pore, YscC/HrcC family YP_001779048.1 TIGRFAM: type III secretion apparatus protein, YscD/HrpQ family; PFAM: Forkhead-associated protein; KEGG: bam:Bamb_4227 type III secretion apparatus protein, YscD/HrpQ family YP_001779049.1 KEGG: bmu:Bmul_3742 LigA YP_001779050.1 KEGG: bvi:Bcep1808_5339 hypothetical protein YP_001779051.1 TIGRFAM: type III secretion apparatus lipoprotein, YscJ/HrcJ family; PFAM: secretory protein YscJ/FliF family protein; KEGG: bam:Bamb_4225 type III secretion apparatus lipoprotein, YscJ/HrcJ family YP_001779052.1 KEGG: bam:Bamb_4224 hypothetical protein YP_001779053.1 TIGRFAM: type III secretion apparatus protein, HrpE/YscL family; KEGG: bam:Bamb_4223 type III secretion apparatus protein, HrpE/YscL family YP_001779054.1 KEGG: bam:Bamb_4222 type III secretion apparatus H+-transporting two-sector ATPase; TIGRFAM: ATPase, FliI/YscN family; type III secretion apparatus H+-transporting two-sector ATPase; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase YP_001779055.1 KEGG: bam:Bamb_4221 hypothetical protein YP_001779056.1 TIGRFAM: type III secretion protein SpaR/YscT/HrcT; PFAM: type III secretion system inner membrane R protein; KEGG: bmu:Bmul_3749 type III secretion protein SpaR/YscT/HrcT YP_001779057.1 PFAM: type III secretion exporter; KEGG: bvi:Bcep1808_5332 type III secretion exporter YP_001779058.1 KEGG: bam:Bamb_4217 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase YP_001779059.1 KEGG: bvi:Bcep1808_5330 hypothetical protein YP_001779060.1 PFAM: Lytic transglycosylase catalytic; KEGG: bvi:Bcep1808_5329 lytic transglycosylase, catalytic YP_001779061.1 part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response YP_001779062.1 TIGRFAM: type III secretion system apparatus protein YscQ/HrcQ; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bam:Bamb_4214 type III secretion system apparatus protein YscQ/HrcQ YP_001779063.1 PFAM: transcriptional regulator domain protein; KEGG: bam:Bamb_4213 response regulator receiver protein YP_001779064.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bam:Bamb_4211 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding YP_001779065.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bur:Bcep18194_B0863 (2Fe-2S)-binding protein YP_001779066.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: bur:Bcep18194_B0864 transcriptional regulator, AraC family YP_001779067.1 KEGG: bur:Bcep18194_B0869 hypothetical protein YP_001779068.1 KEGG: bur:Bcep18194_B0872 hypothetical protein YP_001779069.1 KEGG: bur:Bcep18194_B0873 hypothetical protein YP_001779070.1 KEGG: bur:Bcep18194_B0874 hypothetical protein YP_001779071.1 KEGG: bur:Bcep18194_B0875 hypothetical protein YP_001779072.1 KEGG: bur:Bcep18194_B0876 hypothetical protein YP_001779073.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bur:Bcep18194_B0877 sigma54 specific transcriptional regulator, fis family YP_001779074.1 KEGG: bur:Bcep18194_B0878 hypothetical protein YP_001779075.1 KEGG: bur:Bcep18194_B0879 hypothetical protein YP_001779076.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bur:Bcep18194_B0880 two component transcriptional regulator, LuxR family YP_001779077.1 PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: bur:Bcep18194_B0881 methyl-accepting chemotaxis sensory transducer YP_001779078.1 KEGG: bur:Bcep18194_B0882 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_001779079.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B0883 transcriptional regulator, AraC family YP_001779080.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bam:Bamb_4201 periplasmic binding protein/LacI transcriptional regulator YP_001779081.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_B0885 ABC sugar transporter, ATPase subunit YP_001779082.1 PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_B0886 ABC sugar transporter, inner-membrane subunit YP_001779083.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bmu:Bmul_3786 alcohol dehydrogenase GroES domain protein YP_001779084.1 PFAM: carbohydrate kinase FGGY; KEGG: bur:Bcep18194_B0888 xylulokinase YP_001779085.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B0889 short chain dehydrogenase YP_001779086.1 KEGG: bmu:Bmul_3789 hypothetical protein YP_001779087.1 KEGG: bur:Bcep18194_B0890 uncharacterized MobA-related protein YP_001779088.1 PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: bur:Bcep18194_B0891 peptidase M15D, VanX D-ala-D-ala dipeptidase YP_001779089.1 KEGG: bam:Bamb_4193 hypothetical protein YP_001779090.1 PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: bam:Bamb_4192 2OG-Fe(II) oxygenase YP_001779091.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: bur:Bcep18194_B0893 TPR repeat protein YP_001779092.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bam:Bamb_4190 TonB-dependent siderophore receptor YP_001779093.1 catalyzes the conversion of carbamoyl phosphate and aspartate to form N-carbamoyl aspartate YP_001779094.1 PFAM: Entericidin EcnAB; KEGG: bam:Bamb_4186 entericidin EcnAB YP_001779095.1 KEGG: bur:Bcep18194_B0899 hypothetical protein YP_001779096.1 PFAM: protein of unknown function DUF6 transmembrane; UAA transporter; KEGG: bur:Bcep18194_B0900 protein of unknown function DUF6, transmembrane YP_001779097.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: bur:Bcep18194_B0901 transcriptional regulator, AraC family YP_001779098.1 KEGG: bur:Bcep18194_B0902 hypothetical protein YP_001779099.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_001779100.1 KEGG: bur:Bcep18194_B0905 hypothetical protein YP_001779101.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_4179 short-chain dehydrogenase/reductase SDR YP_001779102.1 response regulator in two-component regulatory system with CreC; CreB protein is phosphorylated by sensor protein phospho-CreC; involved in catabolic regulation YP_001779103.1 part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation YP_001779104.1 PFAM: Inner membrane CreD family protein; KEGG: bur:Bcep18194_B0914 hypothetical protein YP_001779105.1 PFAM: Endoribonuclease L-PSP; KEGG: bur:Bcep18194_B0915 endoribonuclease L-PSP YP_001779106.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0918 major facilitator superfamily (MFS_1) transporter YP_001779107.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0919 transcriptional regulator, LysR family YP_001779108.1 KEGG: bur:Bcep18194_B0920 hypothetical protein YP_001779109.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4175 transcriptional regulator, LysR family YP_001779110.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: bur:Bcep18194_B0922 NAD-dependent epimerase/dehydratase YP_001779112.1 KEGG: bur:Bcep18194_B0924 hypothetical protein YP_001779113.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_4172 major facilitator superfamily MFS_1 YP_001779114.1 KEGG: bam:Bamb_4171 hypothetical protein YP_001779115.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0927 transcriptional regulator, LysR family YP_001779116.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B0928 short-chain dehydrogenase/reductase SDR YP_001779117.1 PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: bam:Bamb_4167 protein of unknown function, zinc metallopeptidase putative YP_001779118.1 PFAM: regulatory protein LuxR; KEGG: bur:Bcep18194_B0930 transcriptional regulator, LuxR family YP_001779119.1 PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_4164 betaine-aldehyde dehydrogenase YP_001779120.1 PFAM: aminotransferase class-III; KEGG: bur:Bcep18194_B0934 hypothetical protein YP_001779121.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B0935 amino acid transporter YP_001779122.1 KEGG: bur:Bcep18194_B0936 hypothetical protein YP_001779123.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B0937 transcriptional regulator, AraC family YP_001779124.1 PFAM: porin Gram-negative type; KEGG: bam:Bamb_4159 porin, gram-negative type YP_001779125.1 PFAM: extracellular solute-binding protein family 1; KEGG: bur:Bcep18194_B0939 ABC sugar transporter, periplasmic ligand binding protein YP_001779126.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0940 ABC sugar transporter, inner membrane subunit YP_001779127.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0941 ABC sugar transporter, inner membrane subunit YP_001779128.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bur:Bcep18194_B0942 transcriptional regulator, LacI family YP_001779129.1 PFAM: phosphatidylinositol-specific phospholipase C X region; KEGG: bur:Bcep18194_B0943 phosphatidylinositol-specific phospholipase C, X region YP_001779130.1 KEGG: bur:Bcep18194_B0944 dienelactone hydrolase-like YP_001779131.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0946 GCN5-related N-acetyltransferase YP_001779132.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0947 transcriptional regulator, LysR family YP_001779133.1 KEGG: bam:Bamb_5896 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001779134.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B0949 outer membrane protein (porin)-like YP_001779135.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_5898 major facilitator superfamily MFS_1 YP_001779136.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bur:Bcep18194_B0951 NADH-flavin oxidoreductase/NADH oxidase YP_001779137.1 PFAM: regulatory protein ArsR; KEGG: bur:Bcep18194_B0952 transcriptional regulator, ArsR family YP_001779138.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bur:Bcep18194_B0962 haloacid dehalogenase-like hydrolase YP_001779139.1 KEGG: bur:Bcep18194_B0964 hypothetical protein YP_001779140.1 PFAM: blue (type 1) copper domain protein; KEGG: bam:Bamb_4142 blue (type 1) copper domain protein YP_001779141.1 PFAM: metallophosphoesterase; KEGG: bur:Bcep18194_B0969 metallophosphoesterase YP_001779142.1 KEGG: bur:Bcep18194_B0970 phosphate transporter YP_001779143.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0971 ABC anion transporter, fused inner membrane subunits YP_001779144.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_B0972 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit YP_001779145.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bur:Bcep18194_B0995 transcriptional regulator, RpiR family YP_001779146.1 KEGG: bur:Bcep18194_B0996 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_001779147.1 PFAM: sodium:dicarboxylate symporter; KEGG: bam:Bamb_4136 sodium:dicarboxylate symporter YP_001779148.1 KEGG: bur:Bcep18194_B0998 hypothetical protein YP_001779149.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B0999 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001779150.1 PFAM: regulatory protein TetR; KEGG: bam:Bamb_4133 transcriptional regulator, TetR family YP_001779151.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1001 transcriptional regulator, LysR family YP_001779152.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B1002 short-chain dehydrogenase/reductase SDR YP_001779153.1 TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bur:Bcep18194_B1003 transcriptional regulator, MerR family YP_001779154.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bur:Bcep18194_B1004 secretion protein, HlyD family YP_001779155.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bur:Bcep18194_B1005 hydrophobe/amphiphile efflux pump, HAE1 family YP_001779156.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B1006 RND efflux system, outer membrane lipoprotein, NodT family YP_001779157.1 PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_B1008 transcriptional regulator, MarR family YP_001779158.1 PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_B1010 glutathione S-transferase-like YP_001779159.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1016 major facilitator superfamily (MFS_1) transporter YP_001779160.1 PFAM: isochorismatase hydrolase; KEGG: bur:Bcep18194_B1017 isochorismatase hydrolase YP_001779161.1 PFAM: protein of unknown function DUF1486; KEGG: bur:Bcep18194_B1020 hypothetical protein YP_001779162.1 PFAM: helix-turn-helix HxlR type; KEGG: bur:Bcep18194_B1021 putative transcriptional regulator YP_001779163.1 KEGG: bam:Bamb_4127 hypothetical protein YP_001779164.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B1023 outer membrane protein (porin) YP_001779165.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: bur:Bcep18194_B1024 GreA/GreB family elongation factor YP_001779166.1 KEGG: bur:Bcep18194_B1025 hypothetical protein YP_001779167.1 PFAM: CBS domain containing protein; KEGG: bur:Bcep18194_B1026 putative signal-transduction protein with CBS domains YP_001779168.1 PFAM: GTP cyclohydrolase II; KEGG: bam:Bamb_4122 GTP cyclohydrolase II YP_001779169.1 PFAM: integrase family protein; KEGG: bur:Bcep18194_B1028 phage integrase YP_001779172.1 PFAM: Integrase catalytic region; KEGG: pol:Bpro_5204 integrase, catalytic region YP_001779173.1 PFAM: transposase IS3/IS911 family protein; KEGG: pol:Bpro_5203 transposase IS3/IS911 YP_001779174.1 KEGG: rle:pRL100038 hypothetical protein YP_001779175.1 KEGG: bte:BTH_II1039 hypothetical protein YP_001779176.1 PFAM: transposase IS66; KEGG: bte:BTH_I3140 TnpC protein YP_001779177.1 PFAM: IS66 Orf2 family protein; KEGG: bxe:Bxe_A3777 putative transposase YP_001779178.1 PFAM: transposase IS3/IS911 family protein; KEGG: bxe:Bxe_C0472 putative transposase IS3/IS911 YP_001779179.1 PFAM: transposase IS3/IS911 family protein; KEGG: bte:BTH_I1931 transposase YP_001779180.1 PFAM: Integrase catalytic region; KEGG: bte:BTH_I1930 transposase YP_001779181.1 KEGG: bmu:Bmul_5728 hypothetical protein YP_001779182.1 PFAM: Integrase catalytic region; KEGG: bpe:BP1810 transposase YP_001779183.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bur:Bcep18194_C7449 histone-like nucleoid-structuring protein H-NS YP_001779184.1 KEGG: bmu:Bmul_2815 hypothetical protein YP_001779185.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B1047 GCN5-related N-acetyltransferase YP_001779186.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_B1048 glyoxalase/bleomycin resistance protein/dioxygenase YP_001779188.1 KEGG: bur:Bcep18194_B1049 hypothetical protein YP_001779189.1 PFAM: autoinducer synthesis protein; KEGG: bur:Bcep18194_B1050 autoinducer synthesis protein YP_001779190.1 KEGG: bur:Bcep18194_B1051 hypothetical protein YP_001779191.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: bur:Bcep18194_B1052 transcriptional regulator, LuxR family YP_001779192.1 PFAM: MgtC/SapB transporter; KEGG: bmu:Bmul_3972 MgtC/SapB transporter YP_001779193.1 PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B1054 outer membrane efflux protein YP_001779194.1 KEGG: bam:Bamb_4113 fusaric acid resistance protein conserved region YP_001779195.1 with MdtO and MdtP is involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride YP_001779196.1 KEGG: bur:Bcep18194_B1057 hypothetical protein YP_001779197.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B1374 transcriptional regulator, LysR-family YP_001779198.1 PFAM: metallophosphoesterase; KEGG: bam:Bamb_4110 metallophosphoesterase YP_001779199.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: bam:Bamb_4109 2OG-Fe(II) oxygenase YP_001779200.1 KEGG: bur:Bcep18194_B1062 hypothetical protein YP_001779201.1 KEGG: bur:Bcep18194_B1099 hypothetical protein YP_001779202.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bur:Bcep18194_B1101 transcriptional regulator, IclR family YP_001779203.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B1102 outer membrane protein (porin) YP_001779204.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bur:Bcep18194_B1103 Rieske (2Fe-2S) protein YP_001779205.1 KEGG: bam:Bamb_4104 hypothetical protein YP_001779206.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bam:Bamb_4103 Rieske (2Fe-2S) domain protein YP_001779207.1 member of a large family of NAD or NADP-dependent oxidoreductases; paralogs occur in many bacteria YP_001779208.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_B1107 hypothetical protein YP_001779209.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B1108 alpha/beta hydrolase YP_001779210.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bur:Bcep18194_B1109 transcriptional regulator, IclR family YP_001779211.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_4098 short-chain dehydrogenase/reductase SDR YP_001779212.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bur:Bcep18194_B1111 hypothetical protein YP_001779213.1 catalyzes the formation of L-aspartate to iminoaspartate in NAD(+) biosynthesis YP_001779214.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B1113 betaine-aldehyde dehydrogenase YP_001779215.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bam:Bamb_4094 glyoxalase/bleomycin resistance protein/dioxygenase YP_001779216.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bam:Bamb_4093 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001779217.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_4092 major facilitator superfamily MFS_1 YP_001779218.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B1117 GCN5-related N-acetyltransferase YP_001779219.1 PFAM: protein of unknown function DUF296; KEGG: bam:Bamb_4088 protein of unknown function DUF296 YP_001779220.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate YP_001779221.1 KEGG: bur:Bcep18194_B1126 hypothetical protein YP_001779222.1 PFAM: protein of unknown function DUF1486; Limonene-12-epoxide hydrolase; KEGG: bur:Bcep18194_B1127 hypothetical protein YP_001779223.1 KEGG: bur:Bcep18194_B1129 hypothetical protein YP_001779224.1 KEGG: bmu:Bmul_4001 hypothetical protein YP_001779225.1 KEGG: bur:Bcep18194_B1130 hypothetical protein YP_001779226.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia YP_001779227.1 KEGG: bur:Bcep18194_B1132 hypothetical protein YP_001779228.1 PFAM: N-acetyltransferase; KEGG: bvi:Bcep1808_5210 arylamine N-acetyltransferase YP_001779229.1 KEGG: bam:Bamb_4080 hypothetical protein YP_001779230.1 KEGG: bur:Bcep18194_B1135 hypothetical protein YP_001779231.1 TIGRFAM: methyltransferase; PFAM: O-methyltransferase domain protein; KEGG: bur:Bcep18194_B1136 protein of unknown function Mtu_121 YP_001779232.1 PFAM: NAD-glutamate dehydrogenase; KEGG: bur:Bcep18194_B1137 NAD-glutamate dehydrogenase YP_001779233.1 KEGG: bmu:Bmul_4011 putative cytoplasmic protein YP_001779234.1 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown YP_001779235.1 PFAM: class II aldolase/adducin family protein; KEGG: bur:Bcep18194_B1139 hypothetical protein YP_001779236.1 PFAM: Urea transporter; KEGG: bur:Bcep18194_B1140 UreA transporter YP_001779237.1 PFAM: protein of unknown function DUF1089; KEGG: bam:Bamb_4072 protein of unknown function DUF1089 YP_001779238.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B1142 alpha/beta hydrolase YP_001779239.1 KEGG: bur:Bcep18194_B1143 metal-dependent hydrolase YP_001779240.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B1144 short-chain dehydrogenase/reductase SDR YP_001779241.1 KEGG: bur:Bcep18194_B1145 flavin-containing monooxygenase FMO YP_001779242.1 PFAM: YhhN family protein; KEGG: bur:Bcep18194_B1146 membrane protein, YhhN-like YP_001779243.1 catalyzes the formation of putrescine from agmatine YP_001779244.1 KEGG: bam:Bamb_4061 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3 YP_001779245.1 PFAM: regulatory protein MerR; KEGG: bur:Bcep18194_B1153 transcriptional regulator, MerR family YP_001779246.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B1154 GCN5-related N-acetyltransferase YP_001779247.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1155 transcriptional regulator, LysR family YP_001779248.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_B1156 zinc-containing alcohol dehydrogenase superfamily YP_001779249.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1157 drug resistance transporter EmrB/QacA subfamily YP_001779250.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bur:Bcep18194_B1158 methyl-accepting chemotaxis sensory transducer YP_001779251.1 PFAM: NERD domain protein; KEGG: bur:Bcep18194_B1159 hypothetical protein YP_001779252.1 PFAM: BetR domain protein; KEGG: bur:Bcep18194_B1160 response regulator receiver domain protein (CheY-like) YP_001779253.1 KEGG: bvi:Bcep1808_5189 hypothetical protein YP_001779254.1 KEGG: bam:Bamb_4049 hypothetical protein YP_001779255.1 PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bam:Bamb_4047 FAD dependent oxidoreductase YP_001779256.1 PFAM: TrkA-N domain protein; Ion transport 2 domain protein; KEGG: bvi:Bcep1808_5177 TrkA-N domain protein YP_001779257.1 KEGG: pau:PA14_37560 asparagine synthetase, glutamine-hydrolysing; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase YP_001779258.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bvi:Bcep1808_5399 diguanylate cyclase YP_001779259.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5847 transcriptional regulator, LysR family YP_001779260.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bam:Bamb_5846 6-phosphogluconate dehydrogenase, NAD-binding YP_001779261.1 PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_5845 betaine-aldehyde dehydrogenase YP_001779262.1 KEGG: bam:Bamb_5844 hypothetical protein YP_001779263.1 KEGG: bam:Bamb_5843 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001779264.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A3279 major facilitator superfamily (MFS) transporter YP_001779265.1 SMART: extracellular solute-binding protein family 3; KEGG: bam:Bamb_6273 extracellular solute-binding protein, family 3 YP_001779266.1 PFAM: major facilitator superfamily MFS_1; KEGG: stm:STM1543 putative transport protein YP_001779267.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: reh:H16_B0334 malate-dehydrogenase YP_001779268.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B0336 transcriptional regulator, LysR-family YP_001779269.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: bur:Bcep18194_C7135 transcriptional regulator, AraC family YP_001779270.1 PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_C7134 aldo/keto reductase YP_001779271.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_B0289 putative NADPH-quinone oxidoreductase, Zn containing YP_001779272.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bte:BTH_I0319 AsnC family regulatory protein YP_001779273.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids YP_001779274.1 KEGG: bxe:Bxe_B2587 hypothetical protein YP_001779275.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: gdi:GDI0886 mannitol 2-dehydrogenase YP_001779276.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bxe:Bxe_A0723 HAD-superfamily hydrolase, subfamily IA, variant3 YP_001779277.1 KEGG: zmo:ZMO0293 metabolite/sugar transport protein; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1 YP_001779278.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bvi:Bcep1808_7161 response regulator receiver protein YP_001779279.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bvi:Bcep1808_7162 integral membrane sensor hybrid histidine kinase YP_001779280.1 KEGG: bvi:Bcep1808_7163 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein YP_001779281.1 TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: bvi:Bcep1808_7164 inner-membrane translocator YP_001779282.1 TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: bvi:Bcep1808_7165 inner-membrane translocator YP_001779283.1 TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: bvi:Bcep1808_7166 ABC transporter related YP_001779284.1 KEGG: bvi:Bcep1808_7167 ABC transporter related; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase YP_001779285.1 PFAM: Acetamidase/Formamidase; KEGG: bvi:Bcep1808_7168 formamidase YP_001779286.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: bvi:Bcep1808_7169 putative regulatory protein, FmdB family YP_001779287.1 aliphatic amidase; catalyzes the hydrolysis of short-chain aliphatic amides to their organic acids and can also transfer the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates YP_001779288.1 PFAM: porin Gram-negative type; KEGG: bxe:Bxe_C0849 outer membrane porin, OmpC family YP_001779289.1 KEGG: bte:BTH_I0273 hypothetical protein YP_001779291.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bte:BTH_I0274 DNA-binding response regulator YP_001779292.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bam:Bamb_2101 periplasmic sensor signal transduction histidine kinase YP_001779293.1 PFAM: transcriptional regulator domain protein; KEGG: bam:Bamb_2100 two component transcriptional regulator, winged helix family YP_001779296.1 PFAM: porin Gram-negative type; KEGG: bxe:Bxe_A0910 outer membrane porin, OmpC family YP_001779297.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bam:Bamb_2098 RND efflux system, outer membrane lipoprotein, NodT family YP_001779298.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bam:Bamb_2097 efflux transporter, RND family, MFP subunit YP_001779299.1 PFAM: acriflavin resistance protein; KEGG: bam:Bamb_2096 acriflavin resistance protein YP_001779300.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bam:Bamb_2102 two component transcriptional regulator, winged helix family YP_001779301.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bte:BTH_I0276 transcriptional regulator, LysR family YP_001779302.1 KEGG: bte:BTH_I0278 hypothetical protein YP_001779303.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B1229 short-chain dehydrogenase/reductase SDR YP_001779304.1 PFAM: cytochrome c class I; KEGG: spe:Spro_2335 gluconate 2-dehydrogenase (acceptor) YP_001779305.1 KEGG: spe:Spro_2334 hypothetical protein YP_001779306.1 PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: spe:Spro_2333 glucose-methanol-choline oxidoreductase YP_001779307.1 PFAM: putative esterase; KEGG: bur:Bcep18194_B1232 putative esterase YP_001779308.1 KEGG: bur:Bcep18194_B1233 hypothetical protein YP_001779309.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B1234 outer membrane protein (porin) YP_001779310.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1235 transcriptional regulator, LysR family YP_001779311.1 PFAM: aldo/keto reductase; KEGG: bam:Bamb_4035 aldo/keto reductase YP_001779312.1 PFAM: protein of unknown function DUF81; KEGG: bur:Bcep18194_B1237 protein of unknown function DUF81 YP_001779313.1 KEGG: bur:Bcep18194_B1238 hypothetical protein YP_001779314.1 PFAM: protein of unknown function DUF1486; KEGG: bam:Bamb_4033 protein of unknown function DUF1486 YP_001779315.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1243 transcriptional regulator, LysR family YP_001779316.1 KEGG: bam:Bamb_4031 hypothetical protein YP_001779317.1 PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: bur:Bcep18194_B1244 peptidase M23B YP_001779318.1 PFAM: beta-lactamase; KEGG: bur:Bcep18194_B1245 beta-lactamase YP_001779319.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1246 transcriptional regulator, LysR family YP_001779320.1 KEGG: bam:Bamb_4027 hypothetical protein YP_001779321.1 PFAM: Transglycosylase-associated protein; KEGG: bam:Bamb_4026 transglycosylase-associated protein YP_001779322.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_B1249 ABC dipeptide/oligopeptide/nickel family transporter, ATPase subunit YP_001779323.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_4020 ABC transporter related YP_001779324.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B1251 ABC dipeptide/oligopeptide/nickel family transporter, inner membrane subunit YP_001779325.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_4018 binding-protein-dependent transport systems inner membrane component YP_001779326.1 PFAM: extracellular solute-binding protein family 5; KEGG: bam:Bamb_4017 extracellular solute-binding protein, family 5 YP_001779327.1 catalyzes the hydrolysis of D-alanyl-D-alanine dipeptide: Zn dependent; involved in peptidoglycan synthesis YP_001779328.1 KEGG: bvi:Bcep1808_5112 putative transcriptional regulator, RpiR family YP_001779329.1 KEGG: bvi:Bcep1808_5109 oxalate decarboxylase; TIGRFAM: bicupin, oxalate decarboxylase family; PFAM: Cupin domain protein; Cupin 2 conserved barrel domain protein YP_001779330.1 TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: bur:Bcep18194_B1257 Mn2+ and Fe2+ transporters of the NRAMP family YP_001779332.1 PFAM: extracellular solute-binding protein family 5; KEGG: bur:Bcep18194_B1258 ABC peptide transporter, periplasmic ligand binding protein YP_001779333.1 KEGG: bur:Bcep18194_B1259 hypothetical protein YP_001779334.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1261 drug resistance transporter EmrB/QacA subfamily YP_001779335.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4009 transcriptional regulator, LysR family YP_001779336.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: bam:Bamb_4008 fusaric acid resistance protein conserved region YP_001779337.1 PFAM: protein of unknown function UPF0187; KEGG: bur:Bcep18194_B1264 hypothetical protein YP_001779338.1 KEGG: bur:Bcep18194_B1265 oxidoreductase alpha (molybdopterin) subunit; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_001779339.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bur:Bcep18194_B1266 transcriptional regulator, GntR family with aminotransferase activity YP_001779340.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bur:Bcep18194_B1267 MscS mechanosensitive ion channel YP_001779341.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: bur:Bcep18194_B1268 sulphate transporter YP_001779342.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1269 transcriptional regulator, LysR family YP_001779343.1 KEGG: bur:Bcep18194_B1270 putative threonine efflux protein-like YP_001779344.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_4002 drug resistance transporter, EmrB/QacA subfamily YP_001779345.1 PFAM: isochorismatase hydrolase; KEGG: bur:Bcep18194_B1272 isochorismatase hydrolase YP_001779346.1 PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_B1273 transcriptional regulator, MarR family YP_001779347.1 KEGG: bam:Bamb_3999 hypothetical protein YP_001779348.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: bam:Bamb_3998 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 YP_001779349.1 KEGG: bur:Bcep18194_B1277 hypothetical protein YP_001779350.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_3996 transcriptional regulator, LysR family YP_001779351.1 KEGG: bur:Bcep18194_B1279 hypothetical protein YP_001779352.1 KEGG: bur:Bcep18194_B1281 magnesium-translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein YP_001779353.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bur:Bcep18194_B1283 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_001779354.1 PFAM: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_B1284 extracellular solute-binding protein, family 3 YP_001779355.1 KEGG: bam:Bamb_3984 hypothetical protein YP_001779356.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_3983 major facilitator superfamily MFS_1 YP_001779357.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B1286 GCN5-related N-acetyltransferase YP_001779358.1 KEGG: bur:Bcep18194_B1287 hypothetical protein YP_001779360.1 TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bur:Bcep18194_B1290 penicillin-binding protein 1C YP_001779361.1 PFAM: alpha-2-macroglobulin domain protein; KEGG: bur:Bcep18194_B1291 alpha-2-macroglobulin-like YP_001779362.1 KEGG: bur:Bcep18194_B1292 hypothetical protein YP_001779363.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: bam:Bamb_3978 glucose-methanol-choline oxidoreductase YP_001779364.1 PFAM: cytochrome c class I; KEGG: bur:Bcep18194_B1294 cytochrome c, class I YP_001779365.1 PFAM: DoxX family protein; KEGG: bam:Bamb_3976 DoxX family protein YP_001779366.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B1296 outer membrane protein (porin) YP_001779367.1 PFAM: isochorismatase hydrolase; KEGG: pfl:PFL_2630 isochorismatase family protein YP_001779368.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1297 major facilitator superfamily (MFS_1) transporter YP_001779369.1 KEGG: bur:Bcep18194_B1298 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001779370.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1299 transcriptional regulator, LysR family YP_001779371.1 PFAM: protein of unknown function DUF1255; KEGG: bur:Bcep18194_B1300 protein of unknown function DUF1255 YP_001779372.1 KEGG: bam:Bamb_3968 hypothetical protein YP_001779373.1 PFAM: CBS domain containing protein; Chloride channel core; KEGG: bur:Bcep18194_B1302 Cl-channel, voltage gated YP_001779374.1 PFAM: regulatory protein MarR; KEGG: bmu:Bmul_4118 transcriptional regulator, MarR family YP_001779375.1 PFAM: CBS domain containing protein; HPP family protein?; KEGG: bam:Bamb_3965 CBS domain containing membrane protein YP_001779376.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1305 transcriptional regulator, LysR family YP_001779377.1 TIGRFAM: d-galactonate transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1306 major facilitator superfamily (MFS_1) transporter YP_001779378.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bur:Bcep18194_B1307 D-isomer specific 2-hydroxyacid dehydrogenase YP_001779379.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_3962 transcriptional regulator, LysR family YP_001779380.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: bur:Bcep18194_B1309 TRAP dicarboxylate transporter-DctP subunit YP_001779381.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bur:Bcep18194_B1310 TRAP dicarboxylate transporter, DctM subunit YP_001779382.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_B1311 transcriptional regulator, LacI family YP_001779383.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bur:Bcep18194_B1312 D-isomer specific 2-hydroxyacid dehydrogenase YP_001779384.1 PFAM: amidohydrolase 2; KEGG: bur:Bcep18194_B1313 amidohydrolase 2 YP_001779385.1 PFAM: sodium/calcium exchanger membrane region; KEGG: bam:Bamb_3961 sodium/calcium exchanger membrane region YP_001779386.1 converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation YP_001779387.1 TIGRFAM: phenylacetate-CoA ligase; KEGG: bur:Bcep18194_B1318 phenylacetate-CoA ligase YP_001779388.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bur:Bcep18194_B1319 enoyl-CoA hydratase/isomerase YP_001779389.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bur:Bcep18194_B1320 multiple antibiotic resistance (MarC)-related proteins YP_001779390.1 PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_B1321 aldo/keto reductase YP_001779391.1 PFAM: Abortive infection protein; KEGG: bur:Bcep18194_B1322 abortive infection protein YP_001779392.1 KEGG: bur:Bcep18194_B1323 hypothetical protein YP_001779393.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_B1325 zinc-containing alcohol dehydrogenase superfamily YP_001779394.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B1326 GCN5-related N-acetyltransferase YP_001779395.1 KEGG: bur:Bcep18194_B1328 hypothetical protein YP_001779396.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B1329 GCN5-related N-acetyltransferase YP_001779397.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bur:Bcep18194_B1330 transcriptional regulator, GntR family with aminotransferase activity YP_001779398.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: bur:Bcep18194_B1333 peptidase S1 and S6, chymotrypsin/Hap YP_001779399.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1334 drug resistance transporter Bcr/CflA subfamily YP_001779400.1 KEGG: bur:Bcep18194_B1335 hypothetical protein YP_001779401.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bur:Bcep18194_B1336 fumarylacetoacetate (FAA) hydrolase YP_001779402.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B1337 transcriptional regulator, AraC family YP_001779403.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: bam:Bamb_3942 uracil-DNA glycosylase superfamily YP_001779404.1 KEGG: bur:Bcep18194_B1339 ABC-type nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein YP_001779405.1 PFAM: response regulator receiver; ANTAR domain protein; KEGG: bam:Bamb_3940 response regulator receiver and ANTAR domain protein YP_001779406.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bur:Bcep18194_B1341 uroporphyrin-III C-methyltransferase-like YP_001779407.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_3937 major facilitator superfamily MFS_1 YP_001779408.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bur:Bcep18194_B1344 nitrite reductase (NAD(P)H), large subunit YP_001779409.1 TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: bur:Bcep18194_B1345 nitrite reductase (NAD(P)H), small subunit YP_001779410.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; flavodoxin/nitric oxide synthase; KEGG: bur:Bcep18194_B1346 sulfite reductase alpha subunit YP_001779411.1 PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: bur:Bcep18194_B1347 short chain dehydrogenase YP_001779412.1 PFAM: protein of unknown function DUF336; KEGG: bur:Bcep18194_B1348 protein of unknown function DUF336 YP_001779413.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1349 transcriptional regulator, LysR family YP_001779414.1 KEGG: bur:Bcep18194_B1350 hypothetical protein YP_001779415.1 PFAM: protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; KEGG: bur:Bcep18194_B1351 hypothetical protein YP_001779416.1 PFAM: virulence factor family protein; KEGG: bur:Bcep18194_B1352 type IV secretory pathway VirJ component YP_001779417.1 PFAM: conserved hypothetical protein; KEGG: bam:Bamb_3930 uncharacterised conserved protein UCP030820 YP_001779418.1 PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: bur:Bcep18194_B1354 nitrite/sulfite reductase, hemoprotein beta-component YP_001779419.1 KEGG: bur:Bcep18194_B1355 hypothetical protein YP_001779420.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bur:Bcep18194_B1356 transcriptional regulator, GntR family with aminotransferase activity YP_001779421.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1357 major facilitator superfamily (MFS_1) transporter YP_001779422.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate YP_001779423.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bur:Bcep18194_B1359 transcriptional regulator, GntR family YP_001779424.1 PFAM: extracellular solute-binding protein family 1; KEGG: bur:Bcep18194_B1360 ABC spermidine/putrescine transporter, periplasmic ligand binding protein YP_001779425.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: bur:Bcep18194_B1361 diguanylate cyclase (GGDEF domain) YP_001779426.1 KEGG: bur:Bcep18194_B1362 hypothetical protein YP_001779427.1 KEGG: bam:Bamb_3923 hypothetical protein YP_001779428.1 KEGG: bur:Bcep18194_B1367 protein of unknown function DUF81 YP_001779429.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1368 transcriptional regulator, LysR family YP_001779430.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bam:Bamb_3921 lysine exporter protein (LysE/YggA) YP_001779431.1 KEGG: bur:Bcep18194_B1370 hypothetical protein YP_001779432.1 PFAM: metallophosphoesterase; KEGG: bur:Bcep18194_B1377 metallophosphoesterase YP_001779433.1 KEGG: bur:Bcep18194_B1378 hypothetical protein YP_001779434.1 KEGG: bam:Bamb_3918 hypothetical protein YP_001779435.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_001779436.1 KEGG: bam:Bamb_3916 hypothetical protein YP_001779437.1 KEGG: bur:Bcep18194_B1381 integral membrane protein YP_001779438.1 PFAM: Protein of unknown function DUF1800; KEGG: bam:Bamb_3913 hypothetical protein YP_001779439.1 PFAM: protein of unknown function DUF1501; KEGG: bur:Bcep18194_B1385 hypothetical protein YP_001779440.1 KEGG: bam:Bamb_3910 hypothetical protein YP_001779441.1 PFAM: integrase family protein; KEGG: bur:Bcep18194_B1405 phage integrase YP_001779442.1 KEGG: bur:Bcep18194_B1408 hypothetical protein YP_001779443.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1409 major facilitator superfamily (MFS_1) transporter YP_001779444.1 KEGG: bvi:Bcep1808_1533 putative lipoprotein YP_001779445.1 KEGG: bur:Bcep18194_B1426 hypothetical protein YP_001779446.1 PFAM: acyltransferase 3; KEGG: bam:Bamb_3905 acyltransferase 3 YP_001779447.1 KEGG: bam:Bamb_3903 hypothetical protein YP_001779448.1 PFAM: PilT protein domain protein; KEGG: bam:Bamb_3902 PilT protein domain protein YP_001779449.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bur:Bcep18194_B1449 cold-shock DNA-binding domain protein YP_001779450.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_001779451.1 PFAM: phosphoesterase; KEGG: bur:Bcep18194_B1454 phosphoesterase YP_001779453.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1455 major facilitator superfamily (MFS_1) transporter YP_001779454.1 KEGG: bmu:Bmul_1322 hypothetical protein YP_001779455.1 KEGG: bur:Bcep18194_B1468 hypothetical protein YP_001779456.1 KEGG: bur:Bcep18194_B1473 hypothetical protein YP_001779457.1 PFAM: protein of unknown function DUF1326; KEGG: bmu:Bmul_4169 protein of unknown function DUF1326 YP_001779458.1 KEGG: bam:Bamb_3893 metal-binding integral membrane protein-like protein YP_001779459.1 KEGG: bam:Bamb_3892 efflux transporter, RND family, MFP subunit YP_001779460.1 PFAM: Collagen triple helix repeat; KEGG: bmu:Bmul_4172 collagen triple helix repeat YP_001779461.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bam:Bamb_3888 transcriptional regulator, AsnC family YP_001779462.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B1477 lysine exporter family protein (LysE/YggA) YP_001779463.1 KEGG: bur:Bcep18194_B1478 hypothetical protein YP_001779464.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bur:Bcep18194_B1479 esterase/lipase/thioesterase YP_001779465.1 KEGG: bur:Bcep18194_B1480 hypothetical protein YP_001779466.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bur:Bcep18194_B1485 TonB-dependent receptor YP_001779467.1 KEGG: bur:Bcep18194_B1492 hypothetical protein YP_001779468.1 catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine YP_001779469.1 PFAM: YheO domain protein; KEGG: bur:Bcep18194_B1494 hypothetical protein YP_001779470.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bur:Bcep18194_B1495 conserved hypothetical protein, YbaK/prolyl-tRNA synthetase associated region YP_001779471.1 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates YP_001779472.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP YP_001779473.1 TIGRFAM: acid phosphatase; PFAM: phosphoesterase; KEGG: bur:Bcep18194_B1519 phosphoesterase YP_001779474.1 KEGG: bur:Bcep18194_B1520 peptidase M41, FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; SMART: AAA ATPase YP_001779475.1 KEGG: bur:Bcep18194_B1522 alpha,alpha-trehalose-phosphate synthase (UDP-forming); TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase family 20 YP_001779476.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bur:Bcep18194_B1523 methyl-accepting chemotaxis sensory transducer YP_001779477.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bur:Bcep18194_B1524 TonB-dependent receptor YP_001779478.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bvi:Bcep1808_4991 alcohol dehydrogenase GroES domain protein YP_001779479.1 KEGG: bam:Bamb_3869 BNR/Asp-box repeat protein YP_001779480.1 PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_B1526 transcriptional regulator, MarR family YP_001779481.1 KEGG: bur:Bcep18194_B1527 alpha/beta hydrolase-like YP_001779482.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_B1528 ABC transporter, substrate-binding protein, aliphatic sulphonates YP_001779483.1 PFAM: luciferase family protein; KEGG: bur:Bcep18194_B1529 alkanesulfonate monooxygenase YP_001779484.1 PFAM: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_B1530 ABC amino acid transporter, periplasmic ligand binding protein YP_001779485.1 KEGG: bam:Bamb_3863 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; ABC transporter related; SMART: AAA ATPase YP_001779486.1 KEGG: bur:Bcep18194_B1532 flavin-dependent oxidoreductase YP_001779487.1 PFAM: luciferase family protein; KEGG: bur:Bcep18194_B1533 flavin-dependent oxidoreductase YP_001779488.1 PFAM: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_B1534 ABC amino acid transporter, periplasmic ligand binding protein YP_001779489.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_3859 GCN5-related N-acetyltransferase YP_001779490.1 Required for efficient pilin antigenic variation YP_001779491.1 KEGG: bam:Bamb_3857 hypothetical protein YP_001779492.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bur:Bcep18194_B1538 succinylglutamate desuccinylase/aspartoacylase YP_001779493.1 KEGG: bur:Bcep18194_B1539 hypothetical protein YP_001779494.1 KEGG: bur:Bcep18194_B1540 diguanylate cyclase (GGDEF domain); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_001779495.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: bam:Bamb_6181 transposase, IS605 OrfB family YP_001779496.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bur:Bcep18194_B1541 aldehyde oxidase YP_001779497.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bam:Bamb_3852 (2Fe-2S)-binding domain protein YP_001779498.1 PFAM: cytochrome c class I; KEGG: bur:Bcep18194_B1543 cytochrome c, class I YP_001779499.1 TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: bur:Bcep18194_B1545 outer membrane protein, OmpA/MotB family YP_001779500.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B1546 outer membrane protein (porin) YP_001779501.1 KEGG: bpd:BURPS668_A2267 hypothetical protein YP_001779502.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bpd:BURPS668_A2270 regulatory protein HrpB YP_001779503.1 KEGG: mle:ML2088 putative cytochrome P450 YP_001779505.1 PFAM: Lytic transglycosylase catalytic; KEGG: bmu:Bmul_0064 lytic transglycosylase catalytic YP_001779506.1 PFAM: adenylylsulfate kinase; KEGG: psa:PST_1400 adenylylsulfate kinase YP_001779509.1 PFAM: amine oxidase; KEGG: art:Arth_1110 amine oxidase YP_001779510.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bxe:Bxe_C1311 putative carbon-nitrogen hydrolase YP_001779511.1 PFAM: Extracellular ligand-binding receptor; KEGG: bxe:Bxe_C1310 ABC branched chain amino acid family transporter, periplasmic ligand binding protein YP_001779512.1 PFAM: inner-membrane translocator; KEGG: bxe:Bxe_C1309 ABC branched chain amino acid family transporter, inner membrane subunit YP_001779513.1 PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_C1308 ABC branched chain amino acid family transporter, fused ATPase and inner membrane subunits YP_001779514.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_C1307 ABC branched chain amino acid family transporter, ATPase subunit YP_001779515.1 PFAM: Amidase; KEGG: bxe:Bxe_C1306 putative amidase YP_001779516.1 KEGG: bxe:Bxe_C1305 ABC branched chain amino acid family transporter, periplasmic ligand binding protein YP_001779517.1 PFAM: ANTAR domain protein; KEGG: bxe:Bxe_C1304 response regulator receiver (CheY) and ANTAR domain protein YP_001779518.1 PFAM: type II secretion system protein E; KEGG: bam:Bamb_5872 type II secretion system protein E YP_001779519.1 KEGG: bam:Bamb_5881 hypothetical protein YP_001779520.1 TIGRFAM: type IVB pilus formation outer membrane protein, R64 PilN family; PFAM: type II and III secretion system protein; KEGG: bam:Bamb_5880 type IVB pilus formation outer membrane protein, R64 PilN family YP_001779521.1 KEGG: bam:Bamb_5879 PilO; putative type IV pilus biosynthesis protein YP_001779522.1 KEGG: bam:Bamb_5878 hypothetical protein YP_001779523.1 PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: bam:Bamb_5877 type II secretion system protein E YP_001779524.1 PFAM: type II secretion system protein; KEGG: bam:Bamb_5876 type II secretion system protein YP_001779525.1 PFAM: PilS domain protein; KEGG: bte:BTH_II0774 type IV pilus biogenesis protein, putative YP_001779526.1 KEGG: pol:Bpro_5445 type II secretion system protein E YP_001779527.1 KEGG: bam:Bamb_5874 PilM; PilM YP_001779528.1 KEGG: bam:Bamb_5873 type IV prepilin YP_001779529.1 TIGRFAM: type III secretion outer membrane pore, YscC/HrcC family; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: bam:Bamb_5871 type III secretion outer membrane pore, YscC/HrcC family YP_001779530.1 PFAM: ATP-binding region ATPase domain protein; KEGG: bpd:BURPS668_A2262 putative sensor histidine kinase YP_001779531.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bte:BTH_II0766 DNA-binding response regulator YP_001779532.1 KEGG: bam:Bamb_5868 type II/III secretion system family protein YP_001779533.1 KEGG: bpd:BURPS668_A2271 hypothetical protein YP_001779535.1 KEGG: bml:BMA10299_1962 hypothetical protein YP_001779536.1 KEGG: bpd:BURPS668_A2274 putative type III secretion apparatus protein YP_001779537.1 KEGG: fal:FRAAL6089 putative serine protease (partial match) YP_001779538.1 TIGRFAM: type III secretion protein, HrpO family; PFAM: export protein FliQ family 3; KEGG: bam:Bamb_5862 type III secretion protein, HrpO family YP_001779539.1 part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response YP_001779540.1 TIGRFAM: type III secretion system apparatus protein YscQ/HrcQ; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bpm:BURPS1710b_A0429 SctQ YP_001779541.1 KEGG: bam:Bamb_5859 hypothetical protein YP_001779542.1 TIGRFAM: type III secretion protein, HrcV family; PFAM: type III secretion FHIPEP protein; KEGG: bte:BTH_II0751 type III secretion inner membrane protein SctV YP_001779543.1 PFAM: type III secretion exporter; KEGG: bam:Bamb_5857 type III secretion exporter YP_001779544.1 KEGG: bam:Bamb_5856 hypothetical protein YP_001779545.1 KEGG: bte:BTH_II0748 HrpB2-like protein YP_001779546.1 KEGG: bam:Bamb_6181 transposase, IS605 OrfB family YP_001779547.1 TIGRFAM: type III secretion apparatus lipoprotein, YscJ/HrcJ family; PFAM: secretory protein YscJ/FliF family protein; KEGG: bte:BTH_II0747 lipoprotein transmembrane protein YP_001779548.1 KEGG: bpm:BURPS1710b_A0684 type III secretion protein HrpB4 YP_001779549.1 TIGRFAM: type III secretion apparatus protein, HrpE/YscL family; PFAM: flagellar assembly protein FliH; KEGG: bpm:BURPS1710b_A0423 HrpF YP_001779550.1 KEGG: bmn:BMA10247_A0627 type III secretion cytoplasmic ATPase SctN; TIGRFAM: ATPase, FliI/YscN family; type III secretion apparatus H+-transporting two-sector ATPase; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase YP_001779551.1 KEGG: bte:BTH_II0743 putative type III secretory pathway protein YP_001779552.1 TIGRFAM: type III secretion protein SpaR/YscT/HrcT; PFAM: type III secretion system inner membrane R protein; KEGG: bam:Bamb_5849 type III secretion protein SpaR/YscT/HrcT YP_001779553.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bvi:Bcep1808_1822 alpha/beta hydrolase fold-3 domain protein YP_001779554.1 KEGG: bur:Bcep18194_C6807 hypothetical protein YP_001779555.1 KEGG: bam:Bamb_6516 integrase, catalytic region YP_001779556.1 KEGG: bxe:Bxe_B0237 putative tranmembrane protein YP_001779557.1 KEGG: bvi:Bcep1808_4376 hypothetical protein YP_001779558.1 PFAM: Patatin; KEGG: bvi:Bcep1808_4375 patatin YP_001779559.1 PFAM: Aldehyde Dehydrogenase; KEGG: bmu:Bmul_4215 aldehyde dehydrogenase YP_001779560.1 PFAM: cytochrome c class I; KEGG: bur:Bcep18194_B1601 cytochrome c, class I YP_001779561.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bur:Bcep18194_B1602 aldehyde oxidase YP_001779562.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bur:Bcep18194_B1603 (2Fe-2S)-binding protein YP_001779563.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bur:Bcep18194_B1604 antibiotic biosynthesis monooxygenase YP_001779564.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: bur:Bcep18194_B1605 zinc-containing alcohol dehydrogenase superfamily YP_001779565.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_B1606 transcriptional regulator, TetR family YP_001779566.1 KEGG: bur:Bcep18194_B1607 hypothetical protein YP_001779567.1 KEGG: bur:Bcep18194_B1608 hypothetical protein YP_001779568.1 PFAM: cation efflux protein; KEGG: bur:Bcep18194_B1618 cation efflux protein YP_001779569.1 PFAM: helix-turn-helix domain protein; KEGG: bur:Bcep18194_B1622 transcriptional regulator, XRE family YP_001779570.1 TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: bur:Bcep18194_B1623 uncharacterized protein related to capsule biosynthesis enzyme-like YP_001779571.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_B1625 4-hydroxyphenylpyruvate dioxygenase YP_001779572.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1626 shikimate transporter YP_001779573.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: bur:Bcep18194_B1627 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001779574.1 KEGG: bmu:Bmul_0418 hypothetical protein YP_001779575.1 PFAM: SpoVT/AbrB domain protein; KEGG: net:Neut_0070 transcriptional regulator/antitoxin, MazE YP_001779576.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bur:Bcep18194_B1629 transcriptional regulator, IclR family YP_001779577.1 SMART: helicase c2; KEGG: bur:Bcep18194_B1630 Rad3-related DNA helicases-like YP_001779578.1 PFAM: VRR-NUC domain protein; KEGG: bur:Bcep18194_B1631 hypothetical protein YP_001779579.1 PFAM: MltA-interacting MipA family protein; KEGG: bam:Bamb_3799 MltA-interacting MipA family protein YP_001779580.1 KEGG: bur:Bcep18194_B1633 hypothetical protein YP_001779581.1 KEGG: bur:Bcep18194_B1635 hypothetical protein YP_001779582.1 KEGG: bur:Bcep18194_B1636 hypothetical protein YP_001779584.1 PFAM: CBS domain containing protein; KEGG: bur:Bcep18194_B1637 CBS domain containing membrane protein YP_001779585.1 PFAM: PRC-barrel domain protein; KEGG: bur:Bcep18194_B1638 hypothetical protein YP_001779586.1 KEGG: bur:Bcep18194_B1639 hypothetical protein YP_001779587.1 KEGG: bmu:Bmul_4243 hypothetical protein YP_001779588.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: bmu:Bmul_4244 transport-associated protein YP_001779589.1 KEGG: bur:Bcep18194_B1640 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001779590.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bur:Bcep18194_B1641 sigma54 specific transcriptional regulator, fis family YP_001779591.1 PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: bur:Bcep18194_B1642 methyl-accepting chemotaxis sensory transducer YP_001779592.1 KEGG: bur:Bcep18194_B1643 hypothetical protein YP_001779593.1 KEGG: bur:Bcep18194_B1644 hypothetical protein YP_001779594.1 PFAM: UspA domain protein; KEGG: bur:Bcep18194_B1645 universal stress protein UspA family YP_001779595.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B1646 amino acid transporter YP_001779596.1 KEGG: bur:Bcep18194_B1648 uncharacterized membrane-associated protein YP_001779597.1 PFAM: protein of unknown function DUF985; KEGG: bur:Bcep18194_B1649 protein of unknown function DUF985 YP_001779598.1 PFAM: UspA domain protein; KEGG: bur:Bcep18194_B1650 universal stress protein, UspA family YP_001779599.1 KEGG: bur:Bcep18194_B1651 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001779600.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bur:Bcep18194_B1652 two component transcriptional regulator, LuxR family YP_001779601.1 PFAM: protein of unknown function DUF1311; KEGG: bur:Bcep18194_B1653 protein of unknown function DUF1311 YP_001779602.1 KEGG: bam:Bamb_3772 hypothetical protein YP_001779603.1 PFAM: type IV pilus assembly PilZ; KEGG: bur:Bcep18194_B1658 hypothetical protein YP_001779604.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bur:Bcep18194_B1659 peptidoglycan glycosyltransferase YP_001779605.1 PFAM: proline racemase; KEGG: bur:Bcep18194_B1660 proline racemase YP_001779606.1 PFAM: Extracellular ligand-binding receptor; KEGG: bur:Bcep18194_B1661 ABC branched chain amino acid family transporter, periplasmic ligand binding protein YP_001779607.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bur:Bcep18194_B1662 transcriptional regulator, GntR family YP_001779608.1 catalyzes the formation of L-proline from L-ornithine YP_001779609.1 PFAM: response regulator receiver; KEGG: bur:Bcep18194_B1664 response regulator receiver domain protein (CheY-like) YP_001779610.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bur:Bcep18194_B1665 transcriptional regulator, Crp/Fnr family YP_001779611.1 KEGG: bur:Bcep18194_B1666 hypothetical protein YP_001779612.1 KEGG: bur:Bcep18194_B1667 hypothetical protein YP_001779613.1 KEGG: bur:Bcep18194_B1668 hypothetical protein YP_001779614.1 KEGG: bur:Bcep18194_B1669 hypothetical protein YP_001779615.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate YP_001779616.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B1671 amino acid transporter YP_001779617.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bam:Bamb_3757 transcriptional regulator, AsnC family YP_001779618.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_B1673 protein of unknown function DUF6, transmembrane YP_001779619.1 PFAM: phosphoesterase; KEGG: bur:Bcep18194_B1674 phospholipase C YP_001779620.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: bam:Bamb_3754 di-haem cytochrome c peroxidase YP_001779621.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_B1676 methylase involved in ubiquinone/menaquinone biosynthesis-like YP_001779622.1 PFAM: FAD dependent oxidoreductase; KEGG: bam:Bamb_5578 FAD dependent oxidoreductase YP_001779623.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_5577 ABC transporter related YP_001779624.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_5576 polar amino acid ABC transporter, inner membrane subunit YP_001779625.1 PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_A1500 ABC polar amino acid transporter, periplasmic ligand binding protein YP_001779626.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bam:Bamb_5574 transcriptional regulator, IclR family