-- dump date 20240426_045559 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP008781.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP008781.1.REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID.REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; AllpathsREFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333xREFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBioREFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 106REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 106 CDSs (without protein) :: 106REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 106 CDSs (without protein) :: 106 Pseudo Genes (ambiguous residues) :: 0 of 106REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 106 CDSs (without protein) :: 106 Pseudo Genes (ambiguous residues) :: 0 of 106 Pseudo Genes (frameshifted) :: 57 of 106REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 106 CDSs (without protein) :: 106 Pseudo Genes (ambiguous residues) :: 0 of 106 Pseudo Genes (frameshifted) :: 57 of 106 Pseudo Genes (incomplete) :: 78 of 106REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 106 CDSs (without protein) :: 106 Pseudo Genes (ambiguous residues) :: 0 of 106 Pseudo Genes (frameshifted) :: 57 of 106 Pseudo Genes (incomplete) :: 78 of 106 Pseudo Genes (internal stop) :: 9 of 106REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 106 CDSs (without protein) :: 106 Pseudo Genes (ambiguous residues) :: 0 of 106 Pseudo Genes (frameshifted) :: 57 of 106 Pseudo Genes (incomplete) :: 78 of 106 Pseudo Genes (internal stop) :: 9 of 106 Pseudo Genes (multiple problems) :: 36 of 106REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 106 CDSs (without protein) :: 106 Pseudo Genes (ambiguous residues) :: 0 of 106 Pseudo Genes (frameshifted) :: 57 of 106 Pseudo Genes (incomplete) :: 78 of 106 Pseudo Genes (internal stop) :: 9 of 106 Pseudo Genes (multiple problems) :: 36 of 106 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP008781.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 106 CDSs (without protein) :: 106 Pseudo Genes (ambiguous residues) :: 0 of 106 Pseudo Genes (frameshifted) :: 57 of 106 Pseudo Genes (incomplete) :: 78 of 106 Pseudo Genes (internal stop) :: 9 of 106 Pseudo Genes (multiple problems) :: 36 of 106 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NZ_CP008782.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP008782.1.REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID.REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; AllpathsREFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333xREFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBioREFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 106REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 106 CDSs (without protein) :: 106REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 106 CDSs (without protein) :: 106 Pseudo Genes (ambiguous residues) :: 0 of 106REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 106 CDSs (without protein) :: 106 Pseudo Genes (ambiguous residues) :: 0 of 106 Pseudo Genes (frameshifted) :: 57 of 106REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 106 CDSs (without protein) :: 106 Pseudo Genes (ambiguous residues) :: 0 of 106 Pseudo Genes (frameshifted) :: 57 of 106 Pseudo Genes (incomplete) :: 78 of 106REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 106 CDSs (without protein) :: 106 Pseudo Genes (ambiguous residues) :: 0 of 106 Pseudo Genes (frameshifted) :: 57 of 106 Pseudo Genes (incomplete) :: 78 of 106 Pseudo Genes (internal stop) :: 9 of 106REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 106 CDSs (without protein) :: 106 Pseudo Genes (ambiguous residues) :: 0 of 106 Pseudo Genes (frameshifted) :: 57 of 106 Pseudo Genes (incomplete) :: 78 of 106 Pseudo Genes (internal stop) :: 9 of 106 Pseudo Genes (multiple problems) :: 36 of 106REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 106 CDSs (without protein) :: 106 Pseudo Genes (ambiguous residues) :: 0 of 106 Pseudo Genes (frameshifted) :: 57 of 106 Pseudo Genes (incomplete) :: 78 of 106 Pseudo Genes (internal stop) :: 9 of 106 Pseudo Genes (multiple problems) :: 36 of 106 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP008782.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ The DNA was obtained from USAMRIID. ##Genome-Assembly-Data-START## Assembly Date :: 02-DEC-2013 Assembly Method :: Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24 Genome Coverage :: 333x Sequencing Technology :: Illumina; 454; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/25/2024 01:21:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,276 CDSs (total) :: 6,200 Genes (coding) :: 6,094 CDSs (with protein) :: 6,094 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 106 CDSs (without protein) :: 106 Pseudo Genes (ambiguous residues) :: 0 of 106 Pseudo Genes (frameshifted) :: 57 of 106 Pseudo Genes (incomplete) :: 78 of 106 Pseudo Genes (internal stop) :: 9 of 106 Pseudo Genes (multiple problems) :: 36 of 106 ##Genome-Annotation-Data-END## COMPLETENESS: full length.