-- dump date   	20120504_140601
-- class       	Genbank::misc_RNA
-- table       	misc_rna_note
-- id	note
Cjs03	Bacterial signal recognition particle RNA; Updated (2006) note: Running Rfam search revealed new non-coding RNA families within Campylobacter jejuni. Rfam RF00169, Bacterial signal recognition particle RNA was identified within CDS. This SRP is a univerally conserved ribonucleoprotein involved in the co-translational targeting of proteins to membranes
Cjs02	TPP riboswitch (THI element); Updated (2006) note: Running Rfam search revealed new non-coding RNA families within Campylobacter jejuni. Rfam RF00059, TPP riboswitch (THI element) was identified within CDS. Vitamin B(1) in its active form thiamin pyrophosphate (TPP) is an essential coenzyme that is synthesised by coupling of pyrimidine and thiazole moieties in bacteria. The previously detected thiamin-regulatory element, thi box (PMID:12376536) was extended, resulting in a new, highly conserved RNA secondary structure, the THI element. Analysis of operon structures identified a large number of new candidate thiamin-regulated genes, mostly transporters, in various prokaryotic organisms (PMID:1147090)
Cjp11	Updated (2006) note: Rfam RF00010, Bacterial RNase P class A has now been identified within CDS. Further support given to product function; rnpB, RNA component of RNase P, similar to many e.g. EMBL:BBRNASEP Z30953 B.burgdorferi (B31) RNase P RNA gene, wublastn score; E = 9.3e-14, 69% identity in 204 bp overlap and 74% identity in 71 bp overlap
Cjs01	10Sa RNA (tmRNA),  Proteolysis Tag: (A)ANNVKFAPAYAKAA; Updated (2006) note: Rfam domain RF00023, tmRNA also identified within CDS. Further support given to product function