-- dump date 20140619_022139 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_002574620.1 222823047 7411143 1..1329 1 NC_012039.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosome replication initiator DnaA 1329 dnaA 7411143 dnaA Campylobacter lari RM2100 chromosome replication initiator DnaA YP_002574620.1 1 D 306263 CDS YP_002574621.1 222823048 7410563 1462..2529 1 NC_012039.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 2529 dnaN 7410563 dnaN Campylobacter lari RM2100 DNA polymerase III subunit beta YP_002574621.1 1462 D 306263 CDS YP_002574622.1 222823049 7410564 2539..4857 1 NC_012039.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 4857 gyrB 7410564 gyrB Campylobacter lari RM2100 DNA gyrase subunit B YP_002574622.1 2539 D 306263 CDS YP_002574623.1 222823050 7410565 4866..5858 1 NC_012039.1 Pfam match to PF00962.13 A_deaminase; adenosine deaminase 5858 7410565 Cla_0004 Campylobacter lari RM2100 adenosine deaminase YP_002574623.1 4866 D 306263 CDS YP_002574624.1 222823051 7410566 5855..6856 1 NC_012039.1 Pfam match to PF04373.4 DUF511; hypothetical protein 6856 7410566 Cla_0005 Campylobacter lari RM2100 hypothetical protein YP_002574624.1 5855 D 306263 CDS YP_002574625.1 222823052 7410567 6832..7215 1 NC_012039.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 7215 7410567 Cla_0006 Campylobacter lari RM2100 7-cyano-7-deazaguanine reductase YP_002574625.1 6832 D 306263 CDS YP_002574626.1 222823053 7410568 7387..8637 1 NC_012039.1 Pfam matches to PF00174.10 Oxidored_molyb, and to PF03404.7 Mo-co_dimer; molybdopterin oxidoreductase 8637 7410568 Cla_0007 Campylobacter lari RM2100 molybdopterin oxidoreductase YP_002574626.1 7387 D 306263 CDS YP_002574627.1 222823054 7410569 8640..8975 1 NC_012039.1 hypothetical protein 8975 7410569 Cla_0008 Campylobacter lari RM2100 hypothetical protein YP_002574627.1 8640 D 306263 CDS YP_002574628.1 222823055 7410570 9018..9662 1 NC_012039.1 hypothetical protein 9662 7410570 Cla_0009 Campylobacter lari RM2100 hypothetical protein YP_002574628.1 9018 D 306263 CDS YP_002574629.1 222823056 7410571 9672..9881 1 NC_012039.1 Pfam match to PF03831.5 PhnA; PhnA family 9881 7410571 Cla_0010 Campylobacter lari RM2100 PhnA family YP_002574629.1 9672 D 306263 CDS YP_002574630.1 222823057 7410572 complement(9895..10527) 1 NC_012039.1 flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase 10527 thyX 7410572 thyX Campylobacter lari RM2100 FAD-dependent thymidylate synthase YP_002574630.1 9895 R 306263 CDS YP_002574631.1 222823058 7410573 10627..12264 1 NC_012039.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 12264 pyrG 7410573 pyrG Campylobacter lari RM2100 CTP synthetase YP_002574631.1 10627 D 306263 CDS YP_002574632.1 222823059 7410574 12254..13825 1 NC_012039.1 Pfam matches to PF01368.11 DHH, and to PF02272.10 DHHA1; single-stranded-DNA specific exonuclease 13825 recJ 7410574 recJ Campylobacter lari RM2100 single-stranded-DNA specific exonuclease YP_002574632.1 12254 D 306263 CDS YP_002574633.1 222823060 7410575 13894..14472 1 NC_012039.1 Pfam match to PF01464.11 SLT; SLT family 14472 7410575 Cla_0014 Campylobacter lari RM2100 SLT family YP_002574633.1 13894 D 306263 CDS YP_002574634.1 222823061 7410576 complement(14482..15549) 1 NC_012039.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 15549 prfA 7410576 prfA Campylobacter lari RM2100 peptide chain release factor 1 YP_002574634.1 14482 R 306263 CDS YP_002574635.1 222823062 7410577 complement(15553..15816) 1 NC_012039.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 15816 rpsT 7410577 rpsT Campylobacter lari RM2100 30S ribosomal protein S20 YP_002574635.1 15553 R 306263 CDS YP_002574636.1 222823063 7410578 complement(16105..16866) 1 NC_012039.1 Pfam matches to PF01479.16 S4, and to PF00849.13 PseudoU_synth_2; ribosomal pseudouridine synthase 16866 7410578 Cla_0017 Campylobacter lari RM2100 ribosomal pseudouridine synthase YP_002574636.1 16105 R 306263 CDS YP_002574637.1 222823064 7410579 complement(16876..18834) 1 NC_012039.1 Pfam matches to PF00753.18 Lactamase_B, and to PF07521.3 RMMBL; metallo-beta-lactamase 18834 7410579 Cla_0018 Campylobacter lari RM2100 metallo-beta-lactamase YP_002574637.1 16876 R 306263 CDS YP_002574638.1 222823065 7410580 complement(18800..19621) 1 NC_012039.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 19621 ksgA 7410580 ksgA Campylobacter lari RM2100 dimethyladenosine transferase YP_002574638.1 18800 R 306263 CDS YP_002574639.1 222823066 7410581 19712..20245 1 NC_012039.1 purine nucleoside phosphorylase 20245 7410581 Cla_0020 Campylobacter lari RM2100 purine nucleoside phosphorylase YP_002574639.1 19712 D 306263 CDS YP_002574640.1 222823067 7410582 20254..21324 1 NC_012039.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 21324 7410582 Cla_0021 Campylobacter lari RM2100 ribosomal RNA large subunit methyltransferase N YP_002574640.1 20254 D 306263 CDS YP_002574641.1 222823068 7410583 21421..22431 1 NC_012039.1 Pfam match to PF04055.12 Radical_SAM; hypothetical protein 22431 7410583 Cla_0022 Campylobacter lari RM2100 hypothetical protein YP_002574641.1 21421 D 306263 CDS YP_002574642.1 222823069 7410584 complement(22428..23330) 1 NC_012039.1 Pfam match to PF00849.13 PseudoU_synth_2; ribosomal pseudouridine synthase 23330 7410584 Cla_0023 Campylobacter lari RM2100 ribosomal pseudouridine synthase YP_002574642.1 22428 R 306263 CDS YP_002574643.1 222823070 7410585 23410..24738 1 NC_012039.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 24738 purB1 7410585 purB1 Campylobacter lari RM2100 adenylosuccinate lyase YP_002574643.1 23410 D 306263 CDS YP_002574644.1 222823071 7410586 24752..27127 1 NC_012039.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 27127 nrdA 7410586 nrdA Campylobacter lari RM2100 ribonucleotide-diphosphate reductase subunit alpha YP_002574644.1 24752 D 306263 CDS YP_002574645.1 222823072 7410587 27143..29128 1 NC_012039.1 Pfam match to PF03169.6 OPT; hypothetical protein 29128 7410587 Cla_0026 Campylobacter lari RM2100 hypothetical protein YP_002574645.1 27143 D 306263 CDS YP_002574646.1 222823073 7410588 29125..29931 1 NC_012039.1 Pfam match to PF02673.9 BacA; undecaprenol kinase 29931 7410588 Cla_0027 Campylobacter lari RM2100 undecaprenol kinase YP_002574646.1 29125 D 306263 CDS YP_002574647.1 222823074 7410589 30038..31849 1 NC_012039.1 catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase 31849 thrS 7410589 thrS Campylobacter lari RM2100 threonyl-tRNA synthetase YP_002574647.1 30038 D 306263 CDS YP_002574648.1 222823075 7410590 31846..32367 1 NC_012039.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 32367 infC 7410590 infC Campylobacter lari RM2100 translation initiation factor IF-3 YP_002574648.1 31846 D 306263 CDS YP_002574649.1 222823076 7410591 32401..33492 1 NC_012039.1 Pfam match to PF02086.6 MethyltransfD12; D12-class N6-adenine-specific DNA methyltransferase 33492 7410591 Cla_0030 Campylobacter lari RM2100 D12-class N6-adenine-specific DNA methyltransferase YP_002574649.1 32401 D 306263 CDS YP_002574650.1 222823077 7410592 complement(33489..34355) 1 NC_012039.1 Pfam match to PF08279.3 HTH_11; transcriptional regulator 34355 7410592 Cla_0031 Campylobacter lari RM2100 transcriptional regulator YP_002574650.1 33489 R 306263 CDS YP_002574651.1 222823078 7410593 complement(34434..35858) 1 NC_012039.1 von Willebrand factor A 35858 7410593 Cla_0032 Campylobacter lari RM2100 von Willebrand factor A YP_002574651.1 34434 R 306263 CDS YP_002574652.1 222823079 7410594 complement(35890..37572) 1 NC_012039.1 Pfam matches to PF07728.5 AAA_5, and to PF03382.5 DUF285; MoxR/RavA-like ATPase 37572 7410594 Cla_0033 Campylobacter lari RM2100 MoxR/RavA-like ATPase YP_002574652.1 35890 R 306263 CDS YP_002574653.1 222823080 7410595 37745..37936 1 NC_012039.1 Pfam match to PF01632.10 Ribosomal_L35p; 50S ribosomal protein L35 37936 rpmI 7410595 rpmI Campylobacter lari RM2100 50S ribosomal protein L35 YP_002574653.1 37745 D 306263 CDS YP_002574654.1 222823081 7410596 38034..38387 1 NC_012039.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 38387 rplT 7410596 rplT Campylobacter lari RM2100 50S ribosomal protein L20 YP_002574654.1 38034 D 306263 CDS YP_002574655.1 222823082 7410597 38335..39273 1 NC_012039.1 catalyzes the formation of a phosphodiester at the site of a single-strand break in duplex DNA; DNA ligase 39273 7410597 Cla_0036 Campylobacter lari RM2100 DNA ligase YP_002574655.1 38335 D 306263 CDS YP_002574656.1 222823083 7410598 complement(39283..40092) 1 NC_012039.1 Pfam match to PF00950.8 ABC-3; cation ABC transporter permease 40092 7410598 Cla_0037 Campylobacter lari RM2100 cation ABC transporter permease YP_002574656.1 39283 R 306263 CDS YP_002574657.1 222823084 7410599 complement(40085..40834) 1 NC_012039.1 Pfam match to PF00005.18 ABC_tran; cation ABC transporter, ATP-binding protein 40834 7410599 Cla_0038 Campylobacter lari RM2100 cation ABC transporter, ATP-binding protein YP_002574657.1 40085 R 306263 CDS YP_002574658.1 222823085 7410600 complement(40831..41667) 1 NC_012039.1 Pfam match to PF01297.8 SBP_bac_9; cation ABC transporter, periplasmic cation-binding protein 41667 7410600 Cla_0039 Campylobacter lari RM2100 cation ABC transporter, periplasmic cation-binding protein YP_002574658.1 40831 R 306263 CDS YP_002574659.1 222823086 7410601 41728..42426 1 NC_012039.1 hypothetical protein 42426 7410601 Cla_0040 Campylobacter lari RM2100 hypothetical protein YP_002574659.1 41728 D 306263 CDS YP_002574660.1 222823087 7410602 complement(42436..43428) 1 NC_012039.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 43428 pyrC1 7410602 pyrC1 Campylobacter lari RM2100 dihydroorotase YP_002574660.1 42436 R 306263 CDS YP_002574661.1 222823088 7410603 complement(43437..43667) 1 NC_012039.1 hypothetical protein 43667 7410603 Cla_0042 Campylobacter lari RM2100 hypothetical protein YP_002574661.1 43437 R 306263 CDS YP_002574662.1 222823089 7410604 complement(43652..44023) 1 NC_012039.1 Pfam match to PF01219.10 DAGK_prokar; diacylglycerol kinase 44023 dgkA 7410604 dgkA Campylobacter lari RM2100 diacylglycerol kinase YP_002574662.1 43652 R 306263 CDS YP_002574663.1 222823090 7410605 complement(44023..45555) 1 NC_012039.1 Pfam matches to PF08019.3 DUF1705, and to PF00884.14 Sulfatase; sulfatase 45555 7410605 Cla_0044 Campylobacter lari RM2100 sulfatase YP_002574663.1 44023 R 306263 CDS YP_002574664.1 222823091 7410606 45654..46412 1 NC_012039.1 Pfam match to PF03372.14 Exo_endo_phos; exodeoxyribonuclease III 46412 xth 7410606 xth Campylobacter lari RM2100 exodeoxyribonuclease III YP_002574664.1 45654 D 306263 CDS YP_002574665.1 222823092 7410608 46766..47380 1 NC_012039.1 Pfam match to PF03382.5 DUF285; hypothetical protein 47380 7410608 Cla_0047 Campylobacter lari RM2100 hypothetical protein YP_002574665.1 46766 D 306263 CDS YP_002574666.1 222823093 7410609 47512..49791 1 NC_012039.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 49791 nrdD 7410609 nrdD Campylobacter lari RM2100 anaerobic ribonucleoside triphosphate reductase YP_002574666.1 47512 D 306263 CDS YP_002574667.1 222823094 7410610 49739..50272 1 NC_012039.1 anaerobic ribonucleoside triphosphate reductase activating protein 50272 nrdG 7410610 nrdG Campylobacter lari RM2100 anaerobic ribonucleoside triphosphate reductase activating protein YP_002574667.1 49739 D 306263 CDS YP_002574668.1 222823095 7410611 50340..50993 1 NC_012039.1 Pfam matches to PF00081.13 Sod_Fe_N, and to PF02777.9 Sod_Fe_C; superoxide dismutase (Fe) 50993 sodB 7410611 sodB Campylobacter lari RM2100 superoxide dismutase (Fe) YP_002574668.1 50340 D 306263 CDS YP_002574669.1 222823096 7410612 51053..52426 1 NC_012039.1 Pfam match to PF03606.6 DcuC; C4-dicarboxylate transporter 52426 7410612 Cla_0051 Campylobacter lari RM2100 C4-dicarboxylate transporter YP_002574669.1 51053 D 306263 CDS YP_002574670.1 222823097 7410613 complement(52449..53438) 1 NC_012039.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 53438 purM 7410613 purM Campylobacter lari RM2100 phosphoribosylaminoimidazole synthetase YP_002574670.1 52449 R 306263 CDS YP_002574671.1 222823098 7410614 53497..54078 1 NC_012039.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 54078 coaE 7410614 coaE Campylobacter lari RM2100 dephospho-CoA kinase YP_002574671.1 53497 D 306263 CDS YP_002574672.1 222823099 7410615 54089..54838 1 NC_012039.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 54838 dapF 7410615 dapF Campylobacter lari RM2100 diaminopimelate epimerase YP_002574672.1 54089 D 306263 CDS YP_002574673.1 222823100 7410616 54813..55520 1 NC_012039.1 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain protein 55520 7410616 Cla_0055 Campylobacter lari RM2100 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain protein YP_002574673.1 54813 D 306263 CDS YP_002574674.1 222823101 7410617 complement(55517..56578) 1 NC_012039.1 hypothetical protein 56578 7410617 Cla_0056 Campylobacter lari RM2100 hypothetical protein YP_002574674.1 55517 R 306263 CDS YP_002574675.1 222823102 7410619 56900..57211 1 NC_012039.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 57211 rpsJ 7410619 rpsJ Campylobacter lari RM2100 30S ribosomal protein S10 YP_002574675.1 56900 D 306263 CDS YP_002574676.1 222823103 7410620 57221..57796 1 NC_012039.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 57796 rplC 7410620 rplC Campylobacter lari RM2100 50S ribosomal protein L3 YP_002574676.1 57221 D 306263 CDS YP_002574677.1 222823104 7410621 57793..58407 1 NC_012039.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 58407 rplD 7410621 rplD Campylobacter lari RM2100 50S ribosomal protein L4 YP_002574677.1 57793 D 306263 CDS YP_002574678.1 222823105 7410622 58409..58690 1 NC_012039.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 58690 rplW 7410622 rplW Campylobacter lari RM2100 50S ribosomal protein L23 YP_002574678.1 58409 D 306263 CDS YP_002574679.1 222823106 7410623 58692..59522 1 NC_012039.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 59522 rplB 7410623 rplB Campylobacter lari RM2100 50S ribosomal protein L2 YP_002574679.1 58692 D 306263 CDS YP_002574680.1 222823107 7410624 59524..59805 1 NC_012039.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 59805 rpsS 7410624 rpsS Campylobacter lari RM2100 30S ribosomal protein S19 YP_002574680.1 59524 D 306263 CDS YP_002574681.1 222823108 7410625 59817..60191 1 NC_012039.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 60191 rplV 7410625 rplV Campylobacter lari RM2100 50S ribosomal protein L22 YP_002574681.1 59817 D 306263 CDS YP_002574682.1 222823109 7410626 60193..60894 1 NC_012039.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 60894 rpsC 7410626 rpsC Campylobacter lari RM2100 30S ribosomal protein S3 YP_002574682.1 60193 D 306263 CDS YP_002574683.1 222823110 7410627 60897..61322 1 NC_012039.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 61322 rplP 7410627 rplP Campylobacter lari RM2100 50S ribosomal protein L16 YP_002574683.1 60897 D 306263 CDS YP_002574684.1 222823111 7410628 61309..61494 1 NC_012039.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 61494 rpmC 7410628 rpmC Campylobacter lari RM2100 50S ribosomal protein L29 YP_002574684.1 61309 D 306263 CDS YP_002574685.1 222823112 7410629 61504..61755 1 NC_012039.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 61755 rpsQ 7410629 rpsQ Campylobacter lari RM2100 30S ribosomal protein S17 YP_002574685.1 61504 D 306263 CDS YP_002574686.1 222823113 7410630 61755..62123 1 NC_012039.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 62123 rplN 7410630 rplN Campylobacter lari RM2100 50S ribosomal protein L14 YP_002574686.1 61755 D 306263 CDS YP_002574687.1 222823114 7410631 62123..62350 1 NC_012039.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 62350 rplX 7410631 rplX Campylobacter lari RM2100 50S ribosomal protein L24 YP_002574687.1 62123 D 306263 CDS YP_002574688.1 222823115 7410632 62352..62897 1 NC_012039.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 62897 rplE 7410632 rplE Campylobacter lari RM2100 50S ribosomal protein L5 YP_002574688.1 62352 D 306263 CDS YP_002574689.1 222823116 7410633 62899..63084 1 NC_012039.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 63084 rpsN 7410633 rpsN Campylobacter lari RM2100 30S ribosomal protein S14 YP_002574689.1 62899 D 306263 CDS YP_002574690.1 222823117 7410634 63097..63492 1 NC_012039.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 63492 rpsH 7410634 rpsH Campylobacter lari RM2100 30S ribosomal protein S8 YP_002574690.1 63097 D 306263 CDS YP_002574691.1 222823118 7410635 63569..64105 1 NC_012039.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 64105 rplF 7410635 rplF Campylobacter lari RM2100 50S ribosomal protein L6 YP_002574691.1 63569 D 306263 CDS YP_002574692.1 222823119 7410636 64116..64472 1 NC_012039.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 64472 rplR 7410636 rplR Campylobacter lari RM2100 50S ribosomal protein L18 YP_002574692.1 64116 D 306263 CDS YP_002574693.1 222823120 7410637 64456..64932 1 NC_012039.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 64932 rpsE 7410637 rpsE Campylobacter lari RM2100 30S ribosomal protein S5 YP_002574693.1 64456 D 306263 CDS YP_002574694.1 222823121 7411309 64936..65328 1 NC_012039.1 late assembly protein; 50S ribosomal protein L15 65328 rplO 7411309 rplO Campylobacter lari RM2100 50S ribosomal protein L15 YP_002574694.1 64936 D 306263 CDS YP_002574695.1 222823122 7411310 65328..66590 1 NC_012039.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 66590 secY 7411310 secY Campylobacter lari RM2100 preprotein translocase subunit SecY YP_002574695.1 65328 D 306263 CDS YP_002574696.1 222823123 7411311 66631..67371 1 NC_012039.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 67371 murI 7411311 murI Campylobacter lari RM2100 glutamate racemase YP_002574696.1 66631 D 306263 CDS YP_002574697.1 222823124 7411312 67472..68518 1 NC_012039.1 Pfam match to PF00710.11 Asparaginase; L-asparaginase 68518 ansA 7411312 ansA Campylobacter lari RM2100 L-asparaginase YP_002574697.1 67472 D 306263 CDS YP_002574698.1 222823125 7411313 68602..69249 1 NC_012039.1 Pfam matches to PF06397.3 Desulfoferrod_N, and to PF02915.8 Rubrerythrin; rubrerythrin 69249 rbr 7411313 rbr Campylobacter lari RM2100 rubrerythrin YP_002574698.1 68602 D 306263 CDS YP_002574699.1 222823126 7411314 69304..69777 1 NC_012039.1 hypothetical protein 69777 7411314 Cla_0082 Campylobacter lari RM2100 hypothetical protein YP_002574699.1 69304 D 306263 CDS YP_002574700.1 222823127 7411315 69777..70328 1 NC_012039.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 70328 rnhB 7411315 rnhB Campylobacter lari RM2100 ribonuclease HII YP_002574700.1 69777 D 306263 CDS YP_002574701.1 222823128 7411316 70708..72030 1 NC_012039.1 L-serine transporter 72030 sdaC 7411316 sdaC Campylobacter lari RM2100 L-serine transporter YP_002574701.1 70708 D 306263 CDS YP_002574702.1 222823129 7411317 72042..73409 1 NC_012039.1 Pfam matches to PF03315.6 SDH_beta, and to PF03313.6 SDH_alpha; L-serine dehydratase 73409 sdaA 7411317 sdaA Campylobacter lari RM2100 L-serine dehydratase YP_002574702.1 72042 D 306263 CDS YP_002574703.1 222823130 7411318 73499..74254 1 NC_012039.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 74254 map 7411318 map Campylobacter lari RM2100 methionine aminopeptidase YP_002574703.1 73499 D 306263 CDS YP_002574704.1 222823131 7411319 complement(74271..76073) 1 NC_012039.1 Pfam match to PF00015.12 MCPsignal; MCP-domain signal transduction protein 76073 7411319 Cla_0087 Campylobacter lari RM2100 MCP-domain signal transduction protein YP_002574704.1 74271 R 306263 CDS YP_002574705.1 222823132 7411320 complement(76057..76977) 1 NC_012039.1 Pfam match to PF03150.5 CCP_MauG; cytochrome c551 peroxidase 76977 7411320 Cla_0088 Campylobacter lari RM2100 cytochrome c551 peroxidase YP_002574705.1 76057 R 306263 CDS YP_002574706.1 222823133 7411321 complement(77034..78323) 1 NC_012039.1 Pfam match to PF07690.7 MFS_1; MFS transporter 78323 7411321 Cla_0089 Campylobacter lari RM2100 MFS transporter YP_002574706.1 77034 R 306263 CDS YP_002574707.1 222823134 7411322 78457..78675 1 NC_012039.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 78675 infA 7411322 infA Campylobacter lari RM2100 translation initiation factor IF-1 YP_002574707.1 78457 D 306263 CDS YP_002574708.1 222823135 7411323 78851..78964 1 NC_012039.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 78964 rpmJ 7411323 rpmJ Campylobacter lari RM2100 50S ribosomal protein L36 YP_002574708.1 78851 D 306263 CDS YP_002574709.1 222823136 7411324 78968..79333 1 NC_012039.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 79333 rpsM 7411324 rpsM Campylobacter lari RM2100 30S ribosomal protein S13 YP_002574709.1 78968 D 306263 CDS YP_002574710.1 222823137 7411325 79343..79735 1 NC_012039.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 79735 rpsK 7411325 rpsK Campylobacter lari RM2100 30S ribosomal protein S11 YP_002574710.1 79343 D 306263 CDS YP_002574711.1 222823138 7411326 79766..80392 1 NC_012039.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 80392 rpsD 7411326 rpsD Campylobacter lari RM2100 30S ribosomal protein S4 YP_002574711.1 79766 D 306263 CDS YP_002574712.1 222823139 7411327 80407..81420 1 NC_012039.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 81420 rpoA 7411327 rpoA Campylobacter lari RM2100 DNA-directed RNA polymerase subunit alpha YP_002574712.1 80407 D 306263 CDS YP_002574713.1 222823140 7411328 81424..81777 1 NC_012039.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 81777 rplQ 7411328 rplQ Campylobacter lari RM2100 50S ribosomal protein L17 YP_002574713.1 81424 D 306263 CDS YP_002574714.1 222823141 7411329 81888..82787 1 NC_012039.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 82787 hisG 7411329 hisG Campylobacter lari RM2100 ATP phosphoribosyltransferase YP_002574714.1 81888 D 306263 CDS YP_002574715.1 222823142 7411330 82797..84077 1 NC_012039.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 84077 hisD 7411330 hisD Campylobacter lari RM2100 histidinol dehydrogenase YP_002574715.1 82797 D 306263 CDS YP_002574716.1 222823143 7411331 84074..85141 1 NC_012039.1 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase 85141 hisB 7411331 hisB Campylobacter lari RM2100 imidazole glycerol-phosphate dehydratase/histidinol phosphatase YP_002574716.1 84074 D 306263 CDS YP_002574717.1 222823144 7411332 85175..85906 1 NC_012039.1 hypothetical protein 85906 7411332 Cla_0100 Campylobacter lari RM2100 hypothetical protein YP_002574717.1 85175 D 306263 CDS YP_002574718.1 222823145 7411333 85928..86509 1 NC_012039.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 86509 hisH 7411333 hisH Campylobacter lari RM2100 imidazole glycerol phosphate synthase subunit HisH YP_002574718.1 85928 D 306263 CDS YP_002574719.1 222823146 7411334 86516..87250 1 NC_012039.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 87250 hisA 7411334 hisA Campylobacter lari RM2100 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_002574719.1 86516 D 306263 CDS YP_002574720.1 222823147 7411335 87232..87999 1 NC_012039.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 87999 hisF1 7411335 hisF1 Campylobacter lari RM2100 imidazole glycerol phosphate synthase subunit HisF YP_002574720.1 87232 D 306263 CDS YP_002574721.1 222823148 7411336 88011..88637 1 NC_012039.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase 88637 hisIE 7411336 hisIE Campylobacter lari RM2100 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase YP_002574721.1 88011 D 306263 CDS YP_002574722.1 222823149 7411337 88760..89905 1 NC_012039.1 Pfam match to PF00015.12 MCPsignal; MCP-domain signal transduction protein 89905 7411337 Cla_0105 Campylobacter lari RM2100 MCP-domain signal transduction protein YP_002574722.1 88760 D 306263 CDS YP_002574723.1 222823150 7411338 90135..90857 1 NC_012039.1 hypothetical protein 90857 7411338 Cla_0106 Campylobacter lari RM2100 hypothetical protein YP_002574723.1 90135 D 306263 CDS YP_002574724.1 222823151 7411339 90993..93437 1 NC_012039.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 93437 flgE 7411339 flgE Campylobacter lari RM2100 flagellar hook protein FlgE YP_002574724.1 90993 D 306263 CDS YP_002574725.1 222823152 7411340 complement(93605..94186) 1 NC_012039.1 hypothetical protein 94186 7411340 Cla_0108 Campylobacter lari RM2100 hypothetical protein YP_002574725.1 93605 R 306263 CDS YP_002574726.1 222823153 7411341 complement(94315..95556) 1 NC_012039.1 Pfam match to PF07690.7 MFS_1; drug resistance transporter, Bcr/CflA family 95556 7411341 Cla_0109 Campylobacter lari RM2100 drug resistance transporter, Bcr/CflA family YP_002574726.1 94315 R 306263 CDS YP_002574727.1 222823154 7411342 95674..95949 1 NC_012039.1 Pfam match to PF01106.8 NifU; NifU family protein 95949 7411342 Cla_0110 Campylobacter lari RM2100 NifU family protein YP_002574727.1 95674 D 306263 CDS YP_002574728.1 222823155 7411343 95936..96475 1 NC_012039.1 hypothetical protein 96475 7411343 Cla_0111 Campylobacter lari RM2100 hypothetical protein YP_002574728.1 95936 D 306263 CDS YP_002574729.1 222823156 7411344 96459..97742 1 NC_012039.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 97742 murE 7411344 murE Campylobacter lari RM2100 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_002574729.1 96459 D 306263 CDS YP_002574730.1 222823157 7411345 97743..98048 1 NC_012039.1 Pfam match to PF02575.7 DUF149; hypothetical protein 98048 7411345 Cla_0113 Campylobacter lari RM2100 hypothetical protein YP_002574730.1 97743 D 306263 CDS YP_002574731.1 222823158 7411346 98045..99124 1 NC_012039.1 hypothetical protein 99124 7411346 Cla_0114 Campylobacter lari RM2100 hypothetical protein YP_002574731.1 98045 D 306263 CDS YP_002574732.1 222823159 7411347 99121..99969 1 NC_012039.1 Pfam match to PF00348.8 polyprenyl_synt; geranyltranstransferase 99969 ispA 7411347 ispA Campylobacter lari RM2100 geranyltranstransferase YP_002574732.1 99121 D 306263 CDS YP_002574733.1 222823160 7411348 99973..101877 1 NC_012039.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 101877 tkt 7411348 tkt Campylobacter lari RM2100 transketolase YP_002574733.1 99973 D 306263 CDS YP_002574734.1 222823161 7411349 101867..102979 1 NC_012039.1 Pfam match to PF02405.7 DUF140; ABC transporter permease 102979 iamB 7411349 iamB Campylobacter lari RM2100 ABC transporter permease YP_002574734.1 101867 D 306263 CDS YP_002574735.1 222823162 7411350 102976..103698 1 NC_012039.1 Pfam match to PF00005.18 ABC_tran; ABC transporter ATP-binding protein 103698 iamA 7411350 iamA Campylobacter lari RM2100 ABC transporter ATP-binding protein YP_002574735.1 102976 D 306263 CDS YP_002574736.1 222823163 7411351 103698..104525 1 NC_012039.1 Pfam match to PF02470.11 MCE; ABC transporter substrate-binding protein 104525 7411351 Cla_0119 Campylobacter lari RM2100 ABC transporter substrate-binding protein YP_002574736.1 103698 D 306263 CDS YP_002574737.1 222823164 7411352 104527..105120 1 NC_012039.1 hypothetical protein 105120 7411352 Cla_0120 Campylobacter lari RM2100 hypothetical protein YP_002574737.1 104527 D 306263 CDS YP_002574738.1 222823165 7411353 105164..105685 1 NC_012039.1 hypothetical protein 105685 7411353 Cla_0121 Campylobacter lari RM2100 hypothetical protein YP_002574738.1 105164 D 306263 CDS YP_002574739.1 222823166 7411354 complement(105717..106256) 1 NC_012039.1 Pfam match to PF00080.11 Sod_Cu; superoxide dismutase (Cu/Zn) 106256 sodC 7411354 sodC Campylobacter lari RM2100 superoxide dismutase (Cu/Zn) YP_002574739.1 105717 R 306263 CDS YP_002574740.1 222823167 7411355 106359..107237 1 NC_012039.1 Pfam match to PF00165.14 HTH_AraC; AraC family transcriptional regulator 107237 7411355 Cla_0123 Campylobacter lari RM2100 AraC family transcriptional regulator YP_002574740.1 106359 D 306263 CDS YP_002574741.1 222823168 7411356 107303..108139 1 NC_012039.1 ATP/GTP-binding protein 108139 7411356 Cla_0124 Campylobacter lari RM2100 ATP/GTP-binding protein YP_002574741.1 107303 D 306263 CDS YP_002574742.1 222823169 7411357 complement(108160..108417) 1 NC_012039.1 hypothetical protein 108417 7411357 Cla_0125 Campylobacter lari RM2100 hypothetical protein YP_002574742.1 108160 R 306263 CDS YP_002574743.1 222823170 7411358 complement(108467..109156) 1 NC_012039.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 109156 ung 7411358 ung Campylobacter lari RM2100 uracil-DNA glycosylase YP_002574743.1 108467 R 306263 CDS YP_002574744.1 222823171 7411359 complement(109165..110472) 1 NC_012039.1 Pfam match to PF02518.17 HATPase_c; two-component sensor histidine kinase 110472 7411359 Cla_0127 Campylobacter lari RM2100 two-component sensor histidine kinase YP_002574744.1 109165 R 306263 CDS YP_002574745.1 222823172 7411360 complement(110462..111148) 1 NC_012039.1 Pfam matches to PF00072.15 Response_reg, and to PF00486.19 Trans_reg_C; two-component response regulator 111148 7411360 Cla_0128 Campylobacter lari RM2100 two-component response regulator YP_002574745.1 110462 R 306263 CDS YP_002574746.1 222823173 7411361 complement(111150..111566) 1 NC_012039.1 Pfam match to PF06518.2 DUF1104; hypothetical protein 111566 7411361 Cla_0129 Campylobacter lari RM2100 hypothetical protein YP_002574746.1 111150 R 306263 CDS YP_002574747.1 222823174 7411362 complement(111629..112381) 1 NC_012039.1 hypothetical protein 112381 7411362 Cla_0130 Campylobacter lari RM2100 hypothetical protein YP_002574747.1 111629 R 306263 CDS YP_002574748.1 222823175 7411363 112471..113499 1 NC_012039.1 Pfam match to PF00730.16 HhH-GPD; A/G-specific adenine glycosylase 113499 mutY 7411363 mutY Campylobacter lari RM2100 A/G-specific adenine glycosylase YP_002574748.1 112471 D 306263 CDS YP_002574749.1 222823176 7411364 113489..114346 1 NC_012039.1 Pfam match to PF04055.12 Radical_SAM; radical SAM domain protein 114346 7411364 Cla_0132 Campylobacter lari RM2100 radical SAM domain protein YP_002574749.1 113489 D 306263 CDS YP_002574750.1 222823177 7411365 complement(114330..115199) 1 NC_012039.1 hypothetical protein 115199 7411365 Cla_0133 Campylobacter lari RM2100 hypothetical protein YP_002574750.1 114330 R 306263 CDS YP_002574751.1 222823178 7411367 complement(115452..116102) 1 NC_012039.1 hypothetical protein 116102 7411367 Cla_0135 Campylobacter lari RM2100 hypothetical protein YP_002574751.1 115452 R 306263 CDS YP_002574752.1 222823179 7411369 complement(116296..116937) 1 NC_012039.1 Pfam match to PF02254.9 TrkA_N; TRK system potassium uptake protein TrkA 116937 ktrA 7411369 ktrA Campylobacter lari RM2100 TRK system potassium uptake protein TrkA YP_002574752.1 116296 R 306263 CDS YP_002574753.1 222823180 7411370 complement(116934..118277) 1 NC_012039.1 Pfam match to PF02386.7 TrkH; TRK system potassium uptake protein TrkB 118277 ktrB 7411370 ktrB Campylobacter lari RM2100 TRK system potassium uptake protein TrkB YP_002574753.1 116934 R 306263 CDS YP_002574754.1 222823181 7411371 complement(118366..119700) 1 NC_012039.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; anaerobic C4-dicarboxylate transporter 119700 7411371 Cla_0139 Campylobacter lari RM2100 anaerobic C4-dicarboxylate transporter YP_002574754.1 118366 R 306263 CDS YP_002574755.1 222823182 7411372 complement(119720..121132) 1 NC_012039.1 Pfam match to PF00206.11 Lyase_1; aspartate ammonia-lyase 121132 aspA 7411372 aspA Campylobacter lari RM2100 aspartate ammonia-lyase YP_002574755.1 119720 R 306263 CDS YP_002574756.1 222823183 7411373 complement(121524..123500) 1 NC_012039.1 Pfam match to PF00015.12 MCPsignal; MCP-domain signal transduction protein 123500 7411373 Cla_0141 Campylobacter lari RM2100 MCP-domain signal transduction protein YP_002574756.1 121524 R 306263 CDS YP_002574757.1 222823184 7411375 complement(125710..126831) 1 NC_012039.1 hypothetical protein 126831 7411375 Cla_0143 Campylobacter lari RM2100 hypothetical protein YP_002574757.1 125710 R 306263 CDS YP_002574758.1 222823185 7411376 complement(126844..127107) 1 NC_012039.1 hypothetical protein 127107 7411376 Cla_0144 Campylobacter lari RM2100 hypothetical protein YP_002574758.1 126844 R 306263 CDS YP_002574759.1 222823186 7411377 complement(127085..127558) 1 NC_012039.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 127558 moaC 7411377 moaC Campylobacter lari RM2100 molybdenum cofactor biosynthesis protein MoaC YP_002574759.1 127085 R 306263 CDS YP_002574760.1 222823187 7411378 127646..127807 1 NC_012039.1 hypothetical protein 127807 7411378 Cla_0146 Campylobacter lari RM2100 hypothetical protein YP_002574760.1 127646 D 306263 CDS YP_002574761.1 222823188 7411379 127810..129120 1 NC_012039.1 Pfam match to PF07690.7 MFS_1; transporter, major facilitator superfamily 129120 7411379 Cla_0147 Campylobacter lari RM2100 transporter, major facilitator superfamily YP_002574761.1 127810 D 306263 CDS YP_002574762.1 222823189 7411380 complement(129089..129565) 1 NC_012039.1 hypothetical protein 129565 7411380 Cla_0148 Campylobacter lari RM2100 hypothetical protein YP_002574762.1 129089 R 306263 CDS YP_002574763.1 222823190 7411381 129674..130057 1 NC_012039.1 hypothetical protein 130057 7411381 Cla_0149 Campylobacter lari RM2100 hypothetical protein YP_002574763.1 129674 D 306263 CDS YP_002574764.1 222823191 7411382 complement(130072..130755) 1 NC_012039.1 hypothetical protein 130755 7411382 Cla_0150 Campylobacter lari RM2100 hypothetical protein YP_002574764.1 130072 R 306263 CDS YP_002574765.1 222823192 7411383 complement(130745..131026) 1 NC_012039.1 hypothetical protein 131026 7411383 Cla_0151 Campylobacter lari RM2100 hypothetical protein YP_002574765.1 130745 R 306263 CDS YP_002574766.1 222823193 7411384 complement(131023..132267) 1 NC_012039.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 132267 eno 7411384 eno Campylobacter lari RM2100 phosphopyruvate hydratase YP_002574766.1 131023 R 306263 CDS YP_002574767.1 222823194 7411385 complement(132267..133301) 1 NC_012039.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 133301 recA 7411385 recA Campylobacter lari RM2100 recombinase A YP_002574767.1 132267 R 306263 CDS YP_002574768.1 222823195 7411386 133412..134275 1 NC_012039.1 Pfam match to PF02642.5 DUF191; hypothetical protein 134275 7411386 Cla_0154 Campylobacter lari RM2100 hypothetical protein YP_002574768.1 133412 D 306263 CDS YP_002574769.1 222823196 7411387 134302..134568 1 NC_012039.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 134568 fliQ 7411387 fliQ Campylobacter lari RM2100 flagellar biosynthesis protein FliQ YP_002574769.1 134302 D 306263 CDS YP_002574770.1 222823197 7411388 134565..135341 1 NC_012039.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 135341 murB 7411388 murB Campylobacter lari RM2100 UDP-N-acetylenolpyruvoylglucosamine reductase YP_002574770.1 134565 D 306263 CDS YP_002574771.1 222823198 7411389 complement(135334..135984) 1 NC_012039.1 hypothetical protein 135984 7411389 Cla_0157 Campylobacter lari RM2100 hypothetical protein YP_002574771.1 135334 R 306263 CDS YP_002574772.1 222823199 7411390 complement(135984..136679) 1 NC_012039.1 Pfam match to PF00459.16 Inositol_P; 3'(2'),5'-bisphosphate nucleotidase 136679 cysQ 7411390 cysQ Campylobacter lari RM2100 3'(2'),5'-bisphosphate nucleotidase YP_002574772.1 135984 R 306263 CDS YP_002574773.1 222823200 7411391 complement(136782..137960) 1 NC_012039.1 Pfam match to PF00999.12 Na_H_Exchanger; Na+/H+ antiporter 137960 7411391 Cla_0159 Campylobacter lari RM2100 Na+/H+ antiporter YP_002574773.1 136782 R 306263 CDS YP_002574774.1 222823201 7411392 complement(137941..138777) 1 NC_012039.1 catalyzes the formation of biotin from dethiobiotin and sulfur; biotin synthase 138777 bioB 7411392 bioB Campylobacter lari RM2100 biotin synthase YP_002574774.1 137941 R 306263 CDS YP_002574775.1 222823202 7410884 complement(138777..140864) 1 NC_012039.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 140864 topA 7410884 topA Campylobacter lari RM2100 DNA topoisomerase I YP_002574775.1 138777 R 306263 CDS YP_002574776.1 222823203 7410885 140995..142707 1 NC_012039.1 Pfam match to PF01973.9 DUF115; motility accessory factor 142707 maf2 7410885 maf2 Campylobacter lari RM2100 motility accessory factor YP_002574776.1 140995 D 306263 CDS YP_002574777.1 222823204 7410886 142783..144492 1 NC_012039.1 FlaB; structural flagella protein; in Helicobacter the flagella are composed of flagellin A and flagellin B; the amounts of each seem to be controlled by environmental conditions; flagellin 144492 flaA 7410886 flaA Campylobacter lari RM2100 flagellin YP_002574777.1 142783 D 306263 CDS YP_002574778.1 222823205 7410887 144598..146307 1 NC_012039.1 FlaA; structural flagella protein; in Helicobacter the flagella are composed of flagellin A and flagellin B; the amounts of each seem to be controlled by environmental conditions; flagellin 146307 flaB 7410887 flaB Campylobacter lari RM2100 flagellin YP_002574778.1 144598 D 306263 CDS YP_002574779.1 222823206 7410888 complement(146335..148212) 1 NC_012039.1 Pfam match to PF01973.9 DUF115; motility accessory factor 148212 maf3 7410888 maf3 Campylobacter lari RM2100 motility accessory factor YP_002574779.1 146335 R 306263 CDS YP_002574780.1 222823207 7410889 complement(148222..150075) 1 NC_012039.1 Pfam match to PF01973.9 DUF115; motility accessory factor 150075 maf4 7410889 maf4 Campylobacter lari RM2100 motility accessory factor YP_002574780.1 148222 R 306263 CDS YP_002574781.1 222823208 7410890 complement(150068..151804) 1 NC_012039.1 Pfam match to PF01973.9 DUF115; motility accessory factor 151804 maf5 7410890 maf5 Campylobacter lari RM2100 motility accessory factor YP_002574781.1 150068 R 306263 CDS YP_002574782.1 222823209 7410891 complement(151821..153737) 1 NC_012039.1 Pfam match to PF01973.9 DUF115; motility accessory factor 153737 maf6 7410891 maf6 Campylobacter lari RM2100 motility accessory factor YP_002574782.1 151821 R 306263 CDS YP_002574783.1 222823210 7410892 complement(153741..154775) 1 NC_012039.1 Pfam matches to PF03102.5 NeuB, and to PF08666.3 SAF; N-acetylneuraminic acid synthase 154775 pseI 7410892 pseI Campylobacter lari RM2100 N-acetylneuraminic acid synthase YP_002574783.1 153741 R 306263 CDS YP_002574784.1 222823211 7410893 154886..155308 1 NC_012039.1 hypothetical protein 155308 7410893 Cla_0170 Campylobacter lari RM2100 hypothetical protein YP_002574784.1 154886 D 306263 CDS YP_002574785.1 222823212 7410894 155305..155601 1 NC_012039.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 155601 fliN 7410894 fliN Campylobacter lari RM2100 flagellar motor switch protein YP_002574785.1 155305 D 306263 CDS YP_002574786.1 222823213 7410895 155598..156356 1 NC_012039.1 hypothetical protein 156356 7410895 Cla_0172 Campylobacter lari RM2100 hypothetical protein YP_002574786.1 155598 D 306263 CDS YP_002574787.1 222823214 7410896 complement(156353..157849) 1 NC_012039.1 Pfam match to PF02541.7 Ppx-GppA; phosphatase, Ppx/GppA family 157849 7410896 Cla_0173 Campylobacter lari RM2100 phosphatase, Ppx/GppA family YP_002574787.1 156353 R 306263 CDS YP_002574788.1 222823215 7410897 complement(157849..158094) 1 NC_012039.1 Pfam match to PF00037.18 Fer4; ferredoxin 158094 fdxB 7410897 fdxB Campylobacter lari RM2100 ferredoxin YP_002574788.1 157849 R 306263 CDS YP_002574789.1 222823216 7410898 complement(158209..158883) 1 NC_012039.1 Pfam matches to PF00072.15 Response_reg, and to PF00486.19 Trans_reg_C; two-component response regulator 158883 7410898 Cla_0175 Campylobacter lari RM2100 two-component response regulator YP_002574789.1 158209 R 306263 CDS YP_002574790.1 222823217 7410899 complement(158961..159278) 1 NC_012039.1 dihydroneopterin aldolase 159278 folB 7410899 folB Campylobacter lari RM2100 dihydroneopterin aldolase YP_002574790.1 158961 R 306263 CDS YP_002574791.1 222823218 7410900 complement(159263..159874) 1 NC_012039.1 Pfam match to PF02660.6 DUF205; hypothetical protein 159874 7410900 Cla_0177 Campylobacter lari RM2100 hypothetical protein YP_002574791.1 159263 R 306263 CDS YP_002574792.1 222823219 7410901 160075..161109 1 NC_012039.1 Pfam match to PF03150.5 CCP_MauG; cytochrome c551 peroxidase 161109 7410901 Cla_0178 Campylobacter lari RM2100 cytochrome c551 peroxidase YP_002574792.1 160075 D 306263 CDS YP_002574793.1 222823220 7410902 161202..162548 1 NC_012039.1 hypothetical protein 162548 7410902 Cla_0179 Campylobacter lari RM2100 hypothetical protein YP_002574793.1 161202 D 306263 CDS YP_002574794.1 222823221 7410903 162566..163195 1 NC_012039.1 hypothetical protein 163195 7410903 Cla_0180 Campylobacter lari RM2100 hypothetical protein YP_002574794.1 162566 D 306263 CDS YP_002574795.1 222823222 7410904 163220..164563 1 NC_012039.1 hypothetical protein 164563 7410904 Cla_0181 Campylobacter lari RM2100 hypothetical protein YP_002574795.1 163220 D 306263 CDS YP_002574796.1 222823223 7410905 164573..165730 1 NC_012039.1 hypothetical protein 165730 7410905 Cla_0182 Campylobacter lari RM2100 hypothetical protein YP_002574796.1 164573 D 306263 CDS YP_002574797.1 222823224 7410906 165855..166163 1 NC_012039.1 Pfam match to PF00829.12 Ribosomal_L21p; 50S ribosomal protein L21 166163 rplU 7410906 rplU Campylobacter lari RM2100 50S ribosomal protein L21 YP_002574797.1 165855 D 306263 CDS YP_002574798.1 222823225 7410907 166174..166428 1 NC_012039.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 166428 rpmA 7410907 rpmA Campylobacter lari RM2100 50S ribosomal protein L27 YP_002574798.1 166174 D 306263 CDS YP_002574799.1 222823226 7410908 166524..167567 1 NC_012039.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 167567 obgE 7410908 obgE Campylobacter lari RM2100 GTPase ObgE YP_002574799.1 166524 D 306263 CDS YP_002574800.1 222823227 7410909 167710..168621 1 NC_012039.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 168621 fmt 7410909 fmt Campylobacter lari RM2100 methionyl-tRNA formyltransferase YP_002574800.1 167710 D 306263 CDS YP_002574801.1 222823228 7410910 168602..169237 1 NC_012039.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 169237 birA 7410910 birA Campylobacter lari RM2100 biotin--protein ligase YP_002574801.1 168602 D 306263 CDS YP_002574802.1 222823229 7410911 169234..170016 1 NC_012039.1 Pfam match to PF01656.14 CbiA; chromosome partitioning protein ParA 170016 parA 7410911 parA Campylobacter lari RM2100 chromosome partitioning protein ParA YP_002574802.1 169234 D 306263 CDS YP_002574803.1 222823230 7410912 170020..170871 1 NC_012039.1 Pfam match to PF02195.9 ParBc; chromosome partitioning protein ParB 170871 parB 7410912 parB Campylobacter lari RM2100 chromosome partitioning protein ParB YP_002574803.1 170020 D 306263 CDS YP_002574804.1 222823231 7410913 170935..171360 1 NC_012039.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B' is part of the membrane proton channel.; ATP synthase F0F1 subunit B' 171360 atpF' 7410913 atpF' Campylobacter lari RM2100 ATP synthase F0F1 subunit B' YP_002574804.1 170935 D 306263 CDS YP_002574805.1 222823232 7410914 171370..171882 1 NC_012039.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; ATP synthase F0F1 subunit B 171882 atpF 7410914 atpF Campylobacter lari RM2100 ATP synthase F0F1 subunit B YP_002574805.1 171370 D 306263 CDS YP_002574806.1 222823233 7410915 171882..172403 1 NC_012039.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The delta subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit delta 172403 atpH 7410915 atpH Campylobacter lari RM2100 ATP synthase F0F1 subunit delta YP_002574806.1 171882 D 306263 CDS YP_002574807.1 222823234 7410916 172413..173918 1 NC_012039.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 173918 atpA 7410916 atpA Campylobacter lari RM2100 ATP synthase F0F1 subunit alpha YP_002574807.1 172413 D 306263 CDS YP_002574808.1 222823235 7410917 173928..174812 1 NC_012039.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; ATP synthase F0F1 subunit gamma 174812 atpG 7410917 atpG Campylobacter lari RM2100 ATP synthase F0F1 subunit gamma YP_002574808.1 173928 D 306263 CDS YP_002574809.1 222823236 7410918 174827..176281 1 NC_012039.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 176281 atpD 7410918 atpD Campylobacter lari RM2100 ATP synthase F0F1 subunit beta YP_002574809.1 174827 D 306263 CDS YP_002574810.1 222823237 7410919 176285..176677 1 NC_012039.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; ATP synthase F0F1 subunit epsilon 176677 atpC 7410919 atpC Campylobacter lari RM2100 ATP synthase F0F1 subunit epsilon YP_002574810.1 176285 D 306263 CDS YP_002574811.1 222823238 7410920 176677..177237 1 NC_012039.1 Pfam match to PF01618.7 MotA_ExbB; TonB system transport protein ExbB 177237 exbB1 7410920 exbB1 Campylobacter lari RM2100 TonB system transport protein ExbB YP_002574811.1 176677 D 306263 CDS YP_002574812.1 222823239 7410921 177241..177627 1 NC_012039.1 Pfam match to PF02472.7 ExbD; TonB system transport protein ExbD 177627 exbD1 7410921 exbD1 Campylobacter lari RM2100 TonB system transport protein ExbD YP_002574812.1 177241 D 306263 CDS YP_002574813.1 222823240 7410922 177631..178410 1 NC_012039.1 TonB domain protein 178410 tonB1 7410922 tonB1 Campylobacter lari RM2100 TonB domain protein YP_002574813.1 177631 D 306263 CDS YP_002574814.1 222823241 7410923 178407..179606 1 NC_012039.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 179606 tolB 7410923 tolB Campylobacter lari RM2100 translocation protein TolB YP_002574814.1 178407 D 306263 CDS YP_002574815.1 222823242 7410924 179675..180160 1 NC_012039.1 Pfam match to PF00691.11 OmpA; peptidoglycan-associated lipoprotein precursor 180160 pal 7410924 pal Campylobacter lari RM2100 peptidoglycan-associated lipoprotein precursor YP_002574815.1 179675 D 306263 CDS YP_002574816.1 222823243 7410925 180172..181161 1 NC_012039.1 hypothetical protein 181161 7410925 Cla_0202 Campylobacter lari RM2100 hypothetical protein YP_002574816.1 180172 D 306263 CDS YP_002574817.1 222823244 7410926 181175..181759 1 NC_012039.1 Pfam match to PF00254.19 FKBP_C; FKBP-type peptidylprolyl isomerase 181759 slyD 7410926 slyD Campylobacter lari RM2100 FKBP-type peptidylprolyl isomerase YP_002574817.1 181175 D 306263 CDS YP_002574818.1 222823245 7410927 181759..182679 1 NC_012039.1 malonyl CoA-ACP transacylase 182679 fabD 7410927 fabD Campylobacter lari RM2100 malonyl CoA-ACP transacylase YP_002574818.1 181759 D 306263 CDS YP_002574819.1 222823246 7410928 182676..183362 1 NC_012039.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 183362 pfs 7410928 pfs Campylobacter lari RM2100 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_002574819.1 182676 D 306263 CDS YP_002574820.1 222823247 7410929 183359..184120 1 NC_012039.1 Pfam match to PF01171.11 ATP_bind_3; ATPase (PP-loop superfamily) 184120 7410929 Cla_0206 Campylobacter lari RM2100 ATPase (PP-loop superfamily) YP_002574820.1 183359 D 306263 CDS YP_002574821.1 222823248 7410930 184113..184625 1 NC_012039.1 amidase 184625 7410930 Cla_0207 Campylobacter lari RM2100 amidase YP_002574821.1 184113 D 306263 CDS YP_002574822.1 222823249 7410931 184627..185241 1 NC_012039.1 recombination protein RecO 185241 7410931 Cla_0208 Campylobacter lari RM2100 recombination protein RecO YP_002574822.1 184627 D 306263 CDS YP_002574823.1 222823250 7410932 complement(185225..185545) 1 NC_012039.1 hypothetical protein 185545 7410932 Cla_0209 Campylobacter lari RM2100 hypothetical protein YP_002574823.1 185225 R 306263 CDS YP_002574824.1 222823251 7410933 complement(185607..186533) 1 NC_012039.1 Pfam match to PF01207.8 Dus; tRNA-dihydrouridine synthase B 186533 dusB 7410933 dusB Campylobacter lari RM2100 tRNA-dihydrouridine synthase B YP_002574824.1 185607 R 306263 CDS YP_002574825.1 222823252 7410934 complement(186530..187513) 1 NC_012039.1 hypothetical protein 187513 7410934 Cla_0211 Campylobacter lari RM2100 hypothetical protein YP_002574825.1 186530 R 306263 CDS YP_002574826.1 222823253 7410935 complement(187510..187866) 1 NC_012039.1 Pfam match to PF01258.8 zf-dskA_traR; DksA-like protein 187866 7410935 Cla_0212 Campylobacter lari RM2100 DksA-like protein YP_002574826.1 187510 R 306263 CDS YP_002574827.1 222823254 7410936 complement(187875..188330) 1 NC_012039.1 Pfam match to PF02590.8 DUF163; hypothetical protein 188330 7410936 Cla_0213 Campylobacter lari RM2100 hypothetical protein YP_002574827.1 187875 R 306263 CDS YP_002574828.1 222823255 7410937 complement(188333..189175) 1 NC_012039.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 189175 accD 7410937 accD Campylobacter lari RM2100 acetyl-CoA carboxylase subunit beta YP_002574828.1 188333 R 306263 CDS YP_002574829.1 222823256 7410938 complement(189226..191442) 1 NC_012039.1 Pfam matches to PF07244.6 Surf_Ag_VNR, and to PF07244.6 Surf_Ag_VNR; hypothetical protein 191442 7410938 Cla_0215 Campylobacter lari RM2100 hypothetical protein YP_002574829.1 189226 R 306263 CDS YP_002574830.1 222823257 7410939 191521..192348 1 NC_012039.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase 192348 tyrA 7410939 tyrA Campylobacter lari RM2100 prephenate dehydrogenase YP_002574830.1 191521 D 306263 CDS YP_002574831.1 222823258 7410940 192421..193800 1 NC_012039.1 Pfam match to PF01551.13 Peptidase_M23; peptidase, M23/M37 family 193800 7410940 Cla_0217 Campylobacter lari RM2100 peptidase, M23/M37 family YP_002574831.1 192421 D 306263 CDS YP_002574832.1 222823259 7410941 193803..194687 1 NC_012039.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 194687 lpxC 7410941 lpxC Campylobacter lari RM2100 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_002574832.1 193803 D 306263 CDS YP_002574833.1 222823260 7410942 194699..195136 1 NC_012039.1 hypothetical protein 195136 7410942 Cla_0219 Campylobacter lari RM2100 hypothetical protein YP_002574833.1 194699 D 306263 CDS YP_002574834.1 222823261 7410943 195145..196023 1 NC_012039.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 196023 thrB 7410943 thrB Campylobacter lari RM2100 homoserine kinase YP_002574834.1 195145 D 306263 CDS YP_002574835.1 222823262 7410944 196048..196314 1 NC_012039.1 hypothetical protein 196314 7410944 Cla_0221 Campylobacter lari RM2100 hypothetical protein YP_002574835.1 196048 D 306263 CDS YP_002574836.1 222823263 7410945 196295..198928 1 NC_012039.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 198928 infB 7410945 infB Campylobacter lari RM2100 translation initiation factor IF-2 YP_002574836.1 196295 D 306263 CDS YP_002574837.1 222823264 7410946 198925..199287 1 NC_012039.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 199287 rbfA 7410946 rbfA Campylobacter lari RM2100 ribosome-binding factor A YP_002574837.1 198925 D 306263 CDS YP_002574838.1 222823265 7410947 199277..199699 1 NC_012039.1 Pfam match to PF02576.8 DUF150; hypothetical protein 199699 7410947 Cla_0224 Campylobacter lari RM2100 hypothetical protein YP_002574838.1 199277 D 306263 CDS YP_002574839.1 222823266 7410948 199821..200447 1 NC_012039.1 endonuclease 200447 7410948 Cla_0225 Campylobacter lari RM2100 endonuclease YP_002574839.1 199821 D 306263 CDS YP_002574840.1 222823267 7410949 complement(200377..201036) 1 NC_012039.1 hypothetical protein 201036 7410949 Cla_0226 Campylobacter lari RM2100 hypothetical protein YP_002574840.1 200377 R 306263 CDS YP_002574841.1 222823268 7410950 201140..202132 1 NC_012039.1 Pfam match to PF00383.13 dCMP_cyt_deam_1; riboflavin biosynthesis protein 202132 ribD 7410950 ribD Campylobacter lari RM2100 riboflavin biosynthesis protein YP_002574841.1 201140 D 306263 CDS YP_002574842.1 222823269 7410951 complement(202129..203022) 1 NC_012039.1 Pfam match to PF01343.9 Peptidase_S49; endopeptidase IV 203022 pspA 7410951 pspA Campylobacter lari RM2100 endopeptidase IV YP_002574842.1 202129 R 306263 CDS YP_002574843.1 222823270 7410952 complement(203010..204233) 1 NC_012039.1 Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline; chlorohydrolase 204233 7410952 Cla_0229 Campylobacter lari RM2100 chlorohydrolase YP_002574843.1 203010 R 306263 CDS YP_002574844.1 222823271 7410953 204322..204804 1 NC_012039.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 204804 aroQ 7410953 aroQ Campylobacter lari RM2100 3-dehydroquinate dehydratase YP_002574844.1 204322 D 306263 CDS YP_002574845.1 222823272 7410954 204801..205826 1 NC_012039.1 Pfam match to PF00557.15 Peptidase_M24; prolidase (Xaa-Pro dipeptidase) 205826 pepQ 7410954 pepQ Campylobacter lari RM2100 prolidase (Xaa-Pro dipeptidase) YP_002574845.1 204801 D 306263 CDS YP_002574846.1 222823273 7410955 205828..206301 1 NC_012039.1 Pfam match to PF01288.11 HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 206301 folK 7410955 folK Campylobacter lari RM2100 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_002574846.1 205828 D 306263 CDS YP_002574847.1 222823274 7410956 206310..207695 1 NC_012039.1 positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 207695 flhF 7410956 flhF Campylobacter lari RM2100 flagellar biosynthesis regulator FlhF YP_002574847.1 206310 D 306263 CDS YP_002574848.1 222823275 7410957 207688..208551 1 NC_012039.1 Pfam match to PF01656.14 CbiA; chromosome partitioning protein ParA 208551 7410957 Cla_0234 Campylobacter lari RM2100 chromosome partitioning protein ParA YP_002574848.1 207688 D 306263 CDS YP_002574849.1 222823276 7410958 208567..208926 1 NC_012039.1 hypothetical protein 208926 7410958 Cla_0235 Campylobacter lari RM2100 hypothetical protein YP_002574849.1 208567 D 306263 CDS YP_002574850.1 222823277 7410959 208913..209599 1 NC_012039.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 209599 fliA 7410959 fliA Campylobacter lari RM2100 flagellar biosynthesis sigma factor YP_002574850.1 208913 D 306263 CDS YP_002574851.1 222823278 7410960 209600..210691 1 NC_012039.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 210691 fliM 7410960 fliM Campylobacter lari RM2100 flagellar motor switch protein FliM YP_002574851.1 209600 D 306263 CDS YP_002574852.1 222823279 7410961 210681..211520 1 NC_012039.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein FliY 211520 fliY 7410961 fliY Campylobacter lari RM2100 flagellar motor switch protein FliY YP_002574852.1 210681 D 306263 CDS YP_002574853.1 222823280 7410962 211517..212152 1 NC_012039.1 Pfam match to PF03641.5 Lysine_decarbox; lysine decarboxylase 212152 7410962 Cla_0239 Campylobacter lari RM2100 lysine decarboxylase YP_002574853.1 211517 D 306263 CDS YP_002574854.1 222823281 7410963 212115..213131 1 NC_012039.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 213131 mnmA 7410963 mnmA Campylobacter lari RM2100 tRNA-specific 2-thiouridylase MnmA YP_002574854.1 212115 D 306263 CDS YP_002574855.1 222823282 7410964 complement(213297..213719) 1 NC_012039.1 hypothetical protein 213719 7410964 Cla_0241 Campylobacter lari RM2100 hypothetical protein YP_002574855.1 213297 R 306263 CDS YP_002574856.1 222823283 7410965 complement(213787..214278) 1 NC_012039.1 Pfam match to PF04608.4 PgpA; phosphatidylglycerophosphatase A 214278 pgpA 7410965 pgpA Campylobacter lari RM2100 phosphatidylglycerophosphatase A YP_002574856.1 213787 R 306263 CDS YP_002574857.1 222823284 7410152 complement(214281..215441) 1 NC_012039.1 sulfate adenylyltransferase 215441 7410152 Cla_0243 Campylobacter lari RM2100 sulfate adenylyltransferase YP_002574857.1 214281 R 306263 CDS YP_002574858.1 222823285 7410153 complement(215419..216294) 1 NC_012039.1 Pfam match to PF00072.15 Response_reg; two-component response regulator 216294 7410153 Cla_0244 Campylobacter lari RM2100 two-component response regulator YP_002574858.1 215419 R 306263 CDS YP_002574859.1 222823286 7410154 complement(216291..217406) 1 NC_012039.1 bifunctional enzyme involved in formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate and 2-C-methyl-D-erythritol 2,4-cyclodiphosphate and CMP from 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; binds divalent cations; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 217406 ispDF 7410154 ispDF Campylobacter lari RM2100 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_002574859.1 216291 R 306263 CDS YP_002574860.1 222823287 7410155 217514..218617 1 NC_012039.1 ATP/GTP-binding protein 218617 mrp 7410155 mrp Campylobacter lari RM2100 ATP/GTP-binding protein YP_002574860.1 217514 D 306263 CDS YP_002574861.1 222823288 7410156 218628..219791 1 NC_012039.1 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 219791 dapD 7410156 dapD Campylobacter lari RM2100 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_002574861.1 218628 D 306263 CDS YP_002574862.1 222823289 7410157 complement(219814..220263) 1 NC_012039.1 Pfam match to PF00210.15 Ferritin; bacterioferritin 220263 7410157 Cla_0248 Campylobacter lari RM2100 bacterioferritin YP_002574862.1 219814 R 306263 CDS YP_002574863.1 222823290 7410158 complement(220392..221615) 1 NC_012039.1 catalyzes the formation of D-fructose 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate isomerase 221615 pgi 7410158 pgi Campylobacter lari RM2100 glucose-6-phosphate isomerase YP_002574863.1 220392 R 306263 CDS YP_002574864.1 222823291 7410159 complement(221609..222433) 1 NC_012039.1 Pfam match to PF00483.14 NTP_transferase; UTP-glucose-1-phosphate uridylyltransferase 222433 galU 7410159 galU Campylobacter lari RM2100 UTP-glucose-1-phosphate uridylyltransferase YP_002574864.1 221609 R 306263 CDS YP_002574865.1 222823292 7410160 222508..223089 1 NC_012039.1 Pfam match to PF01205.10 UPF0029; hypothetical protein 223089 7410160 Cla_0251 Campylobacter lari RM2100 hypothetical protein YP_002574865.1 222508 D 306263 CDS YP_002574866.1 222823293 7410161 complement(223109..223441) 1 NC_012039.1 hypothetical protein 223441 7410161 Cla_0252 Campylobacter lari RM2100 hypothetical protein YP_002574866.1 223109 R 306263 CDS YP_002574867.1 222823294 7410162 complement(223492..223824) 1 NC_012039.1 hypothetical protein 223824 7410162 Cla_0253 Campylobacter lari RM2100 hypothetical protein YP_002574867.1 223492 R 306263 CDS YP_002574868.1 222823295 7410163 complement(223821..225395) 1 NC_012039.1 Pfam matches to PF00005.18 ABC_tran, and to PF00005.18 ABC_tran; ABC transporter ATP-binding protein 225395 7410163 Cla_0254 Campylobacter lari RM2100 ABC transporter ATP-binding protein YP_002574868.1 223821 R 306263 CDS YP_002574869.1 222823296 7410164 225449..226453 1 NC_012039.1 hypothetical protein 226453 7410164 Cla_0255 Campylobacter lari RM2100 hypothetical protein YP_002574869.1 225449 D 306263 CDS YP_002574870.1 222823297 7410165 226455..227822 1 NC_012039.1 Pfam matches to PF02878.7 PGM_PMM_I, and to PF02879.7 PGM_PMM_II; phosphohexosemutase 227822 7410165 Cla_0256 Campylobacter lari RM2100 phosphohexosemutase YP_002574870.1 226455 D 306263 CDS YP_002574871.1 222823298 7410166 complement(227803..228759) 1 NC_012039.1 Pfam match to PF01171.11 ATP_bind_3; tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) 228759 7410166 Cla_0257 Campylobacter lari RM2100 tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) YP_002574871.1 227803 R 306263 CDS YP_002574872.1 222823299 7410167 complement(228752..230068) 1 NC_012039.1 Pfam matches to PF00919.11 UPF0004, and to PF04055.12 Radical_SAM; radical SAM protein 230068 7410167 Cla_0258 Campylobacter lari RM2100 radical SAM protein YP_002574872.1 228752 R 306263 CDS YP_002574873.1 222823300 7410168 230145..231245 1 NC_012039.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 231245 prfB 7410168 prfB Campylobacter lari RM2100 peptide chain release factor 2 YP_002574873.1 230145 D 306263 CDS YP_002574874.1 222823301 7410169 231266..232102 1 NC_012039.1 Pfam match to PF00582.17 Usp; UspA-related nucleotide-binding protein 232102 uspA 7410169 uspA Campylobacter lari RM2100 UspA-related nucleotide-binding protein YP_002574874.1 231266 D 306263 CDS YP_002574875.1 222823302 7410170 232102..232791 1 NC_012039.1 Pfam match to PF07885.7 Ion_trans_2; hypothetical protein 232791 7410170 Cla_0261 Campylobacter lari RM2100 hypothetical protein YP_002574875.1 232102 D 306263 CDS YP_002574876.1 222823303 7410171 complement(232805..233407) 1 NC_012039.1 Pfam match to PF03382.5 DUF285; hypothetical protein 233407 7410171 Cla_0262 Campylobacter lari RM2100 hypothetical protein YP_002574876.1 232805 R 306263 CDS YP_002574877.1 222823304 7410172 233609..233812 1 NC_012039.1 hypothetical protein 233812 7410172 Cla_0263 Campylobacter lari RM2100 hypothetical protein YP_002574877.1 233609 D 306263 CDS YP_002574878.1 222823305 7410173 complement(233868..234911) 1 NC_012039.1 Pfam match to PF03601.5 Cons_hypoth698; hypothetical protein 234911 7410173 Cla_0264 Campylobacter lari RM2100 hypothetical protein YP_002574878.1 233868 R 306263 CDS YP_002574879.1 222823306 7410174 235023..235886 1 NC_012039.1 Pfam matches to PF00126.18 HTH_1, and to PF03466.11 LysR_substrate; LysR family transcriptional regulator 235886 7410174 Cla_0265 Campylobacter lari RM2100 LysR family transcriptional regulator YP_002574879.1 235023 D 306263 CDS YP_002574880.1 222823307 7410175 complement(235878..237077) 1 NC_012039.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 237077 murD 7410175 murD Campylobacter lari RM2100 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_002574880.1 235878 R 306263 CDS YP_002574881.1 222823308 7410176 complement(237077..238135) 1 NC_012039.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 238135 mraY 7410176 mraY Campylobacter lari RM2100 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_002574881.1 237077 R 306263 CDS YP_002574882.1 222823309 7410177 238215..239693 1 NC_012039.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 239693 pgm 7410177 pgm Campylobacter lari RM2100 phosphoglyceromutase YP_002574882.1 238215 D 306263 CDS YP_002574883.1 222823310 7410178 239709..240452 1 NC_012039.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 240452 fabG 7410178 fabG Campylobacter lari RM2100 3-ketoacyl-ACP reductase YP_002574883.1 239709 D 306263 CDS YP_002574884.1 222823311 7410179 complement(240473..240823) 1 NC_012039.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 240823 acpS 7410179 acpS Campylobacter lari RM2100 4'-phosphopantetheinyl transferase YP_002574884.1 240473 R 306263 CDS YP_002574885.1 222823312 7410180 complement(240823..241374) 1 NC_012039.1 interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body protein FliL 241374 fliL 7410180 fliL Campylobacter lari RM2100 flagellar basal body protein FliL YP_002574885.1 240823 R 306263 CDS YP_002574886.1 222823313 7410181 complement(241440..242078) 1 NC_012039.1 Pfam match to PF08348.2 PAS_6; hypothetical protein 242078 7410181 Cla_0272 Campylobacter lari RM2100 hypothetical protein YP_002574886.1 241440 R 306263 CDS YP_002574887.1 222823314 7410182 242321..243745 1 NC_012039.1 Pfam match to PF00199.10 Catalase; catalase 243745 katA 7410182 katA Campylobacter lari RM2100 catalase YP_002574887.1 242321 D 306263 CDS YP_002574888.1 222823315 7410183 243796..244284 1 NC_012039.1 Pfam match to PF00023.21 Ank; ankyrin repeat family protein 244284 7410183 Cla_0274 Campylobacter lari RM2100 ankyrin repeat family protein YP_002574888.1 243796 D 306263 CDS YP_002574889.1 222823316 7410184 244328..245728 1 NC_012039.1 Pfam match to PF00206.11 Lyase_1; argininosuccinate lyase 245728 argH 7410184 argH Campylobacter lari RM2100 argininosuccinate lyase YP_002574889.1 244328 D 306263 CDS YP_002574890.1 222823317 7410185 complement(245767..246435) 1 NC_012039.1 Pfam match to PF08348.2 PAS_6; hypothetical protein 246435 7410185 Cla_0276 Campylobacter lari RM2100 hypothetical protein YP_002574890.1 245767 R 306263 CDS YP_002574891.1 222823318 7410186 246604..246966 1 NC_012039.1 Pfam match to PF01042.12 Ribonuc_L-PSP; endoribonuclease L-PSP 246966 7410186 Cla_0277 Campylobacter lari RM2100 endoribonuclease L-PSP YP_002574891.1 246604 D 306263 CDS YP_002574892.1 222823319 7410187 246970..248409 1 NC_012039.1 Pfam match to PF03606.6 DcuC; anaerobic C4-dicarboxylate transporter 248409 7410187 Cla_0278 Campylobacter lari RM2100 anaerobic C4-dicarboxylate transporter YP_002574892.1 246970 D 306263 CDS YP_002574893.1 222823320 7410188 248423..249592 1 NC_012039.1 Pfam match to PF01053.11 Cys_Met_Meta_PP; cystathionase beta-lyase 249592 metC 7410188 metC Campylobacter lari RM2100 cystathionase beta-lyase YP_002574893.1 248423 D 306263 CDS YP_002574894.1 222823321 7410189 249596..250960 1 NC_012039.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 250960 purB2 7410189 purB2 Campylobacter lari RM2100 adenylosuccinate lyase YP_002574894.1 249596 D 306263 CDS YP_002574895.1 222823322 7410190 250967..252307 1 NC_012039.1 Pfam match to PF03972.5 MmgE_PrpD; MmgE/PrpD family protein 252307 7410190 Cla_0281 Campylobacter lari RM2100 MmgE/PrpD family protein YP_002574895.1 250967 D 306263 CDS YP_002574896.1 222823323 7410191 252400..252627 1 NC_012039.1 Pfam match to PF04023.5 FeoA; ferrous iron transport protein A 252627 7410191 Cla_0282 Campylobacter lari RM2100 ferrous iron transport protein A YP_002574896.1 252400 D 306263 CDS YP_002574897.1 222823324 7410192 252627..254651 1 NC_012039.1 Pfam matches to PF01926.14 MMR_HSR1, and to PF02421.9 FeoB_N; ferrous iron transport protein B 254651 feoB 7410192 feoB Campylobacter lari RM2100 ferrous iron transport protein B YP_002574897.1 252627 D 306263 CDS YP_002574898.1 222823325 7410193 complement(254667..255332) 1 NC_012039.1 Pfam match to PF03070.7 TENA_THI-4; transcriptional regulator, TenA/Thi-4-like protein 255332 7410193 Cla_0284 Campylobacter lari RM2100 transcriptional regulator, TenA/Thi-4-like protein YP_002574898.1 254667 R 306263 CDS YP_002574899.1 222823326 7410194 255478..255711 1 NC_012039.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 255711 acpP 7410194 acpP Campylobacter lari RM2100 acyl carrier protein YP_002574899.1 255478 D 306263 CDS YP_002574900.1 222823327 7410195 255739..256953 1 NC_012039.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 256953 fabF 7410195 fabF Campylobacter lari RM2100 3-oxoacyl-ACP synthase YP_002574900.1 255739 D 306263 CDS YP_002574901.1 222823328 7410196 256955..257890 1 NC_012039.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 257890 accA 7410196 accA Campylobacter lari RM2100 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_002574901.1 256955 D 306263 CDS YP_002574903.1 222823329 7410198 258920..259696 1 NC_012039.1 Pfam match to PF01061.15 ABC2_membrane; capsular polysaccharide ABC transporter permease 259696 kpsM 7410198 kpsM Campylobacter lari RM2100 capsular polysaccharide ABC transporter permease YP_002574903.1 258920 D 306263 CDS YP_002574904.1 222823330 7410199 259693..260364 1 NC_012039.1 Pfam match to PF00005.18 ABC_tran; capsular polysaccharide ABC transporter, ATP-binding protein 260364 kpsT 7410199 kpsT Campylobacter lari RM2100 capsular polysaccharide ABC transporter, ATP-binding protein YP_002574904.1 259693 D 306263 CDS YP_002574905.1 222823331 7410200 260354..261469 1 NC_012039.1 capsular polysaccharide export inner-membrane protein KpsE 261469 kpsE 7410200 kpsE Campylobacter lari RM2100 capsular polysaccharide export inner-membrane protein KpsE YP_002574905.1 260354 D 306263 CDS YP_002574906.1 222823332 7410201 261469..263127 1 NC_012039.1 Pfam match to PF02563.7 Poly_export; capsular polysaccharide ABC transporter, periplasmic polysaccharide-binding protein 263127 kpsD 7410201 kpsD Campylobacter lari RM2100 capsular polysaccharide ABC transporter, periplasmic polysaccharide-binding protein YP_002574906.1 261469 D 306263 CDS YP_002574907.1 222823333 7410202 263136..264092 1 NC_012039.1 Pfam matches to PF01380.13 SIS, and to PF00571.19 CBS; arabinose-5-phosphate isomerase 264092 kpsF 7410202 kpsF Campylobacter lari RM2100 arabinose-5-phosphate isomerase YP_002574907.1 263136 D 306263 CDS YP_002574908.1 222823334 7410203 264092..264481 1 NC_012039.1 Pfam match to PF01467.17 CTP_transf_2; glycerol-3-phosphate cytidylyltransferase 264481 7410203 Cla_0295 Campylobacter lari RM2100 glycerol-3-phosphate cytidylyltransferase YP_002574908.1 264092 D 306263 CDS YP_002574909.1 222823335 7410204 264478..265674 1 NC_012039.1 hypothetical protein 265674 7410204 Cla_0296 Campylobacter lari RM2100 hypothetical protein YP_002574909.1 264478 D 306263 CDS YP_002574910.1 222823336 7410205 265686..268982 1 NC_012039.1 Pfam matches to PF07719.8 TPR_2, and to PF00515.19 TPR_1; CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase 268982 7410205 Cla_0297 Campylobacter lari RM2100 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase YP_002574910.1 265686 D 306263 CDS YP_002574911.1 222823337 7410206 268949..271555 1 NC_012039.1 capsular polysaccharide biosynthesis protein 271555 7410206 Cla_0298 Campylobacter lari RM2100 capsular polysaccharide biosynthesis protein YP_002574911.1 268949 D 306263 CDS YP_002574912.1 222823338 7410207 271555..273402 1 NC_012039.1 capsular polysaccharide biosynthesis protein, glycosyltransferase 273402 7410207 Cla_0299 Campylobacter lari RM2100 capsular polysaccharide biosynthesis protein, glycosyltransferase YP_002574912.1 271555 D 306263 CDS YP_002574913.1 222823339 7410208 273603..273848 1 NC_012039.1 pseudogene; capsular polysaccharide biosynthesis protein 273848 7410208 Cla_0300 Campylobacter lari RM2100 capsular polysaccharide biosynthesis protein YP_002574913.1 273603 D 306263 CDS YP_002574914.1 222823340 7410209 273845..275383 1 NC_012039.1 capsular polysaccharide biosynthesis protein 275383 7410209 Cla_0301 Campylobacter lari RM2100 capsular polysaccharide biosynthesis protein YP_002574914.1 273845 D 306263 CDS YP_002574915.1 222823341 7410210 275380..276111 1 NC_012039.1 capsular polysaccharide biosynthesis protein 276111 7410210 Cla_0302 Campylobacter lari RM2100 capsular polysaccharide biosynthesis protein YP_002574915.1 275380 D 306263 CDS YP_002574916.1 222823342 7410211 276092..276727 1 NC_012039.1 hypothetical protein 276727 7410211 Cla_0303 Campylobacter lari RM2100 hypothetical protein YP_002574916.1 276092 D 306263 CDS YP_002574917.1 222823343 7410212 276720..277355 1 NC_012039.1 Pfam match to PF00702.17 Hydrolase; HAD-superfamily hydrolase 277355 7410212 Cla_0304 Campylobacter lari RM2100 HAD-superfamily hydrolase YP_002574917.1 276720 D 306263 CDS YP_002574918.1 222823344 7410213 277352..278092 1 NC_012039.1 capsular polysaccharide biosynthesis protein, nucleotidyltransferase 278092 7410213 Cla_0305 Campylobacter lari RM2100 capsular polysaccharide biosynthesis protein, nucleotidyltransferase YP_002574918.1 277352 D 306263 CDS YP_002574919.1 222823345 7410214 278073..278408 1 NC_012039.1 hypothetical protein 278408 7410214 Cla_0306 Campylobacter lari RM2100 hypothetical protein YP_002574919.1 278073 D 306263 CDS YP_002574920.1 222823346 7410215 278411..278743 1 NC_012039.1 hypothetical protein 278743 7410215 Cla_0307 Campylobacter lari RM2100 hypothetical protein YP_002574920.1 278411 D 306263 CDS YP_002574921.1 222823347 7410216 278736..279473 1 NC_012039.1 capsular polysaccharide biosynthesis protein, nucleotidyltransferase 279473 7410216 Cla_0308 Campylobacter lari RM2100 capsular polysaccharide biosynthesis protein, nucleotidyltransferase YP_002574921.1 278736 D 306263 CDS YP_002574922.1 222823348 7410218 280582..282483 1 NC_012039.1 contains poly-GC tract leading to end point slips (G9/G10/G11); sugar transferase) 282483 7410218 Cla_0310 Campylobacter lari RM2100 sugar transferase) YP_002574922.1 280582 D 306263 CDS YP_002574923.1 222823349 7410220 284430..284858 1 NC_012039.1 contains poly-GC tract leading to end point slips; Pfam match to PF08241.3 Methyltransf_11; hypothetical protein 284858 7410220 Cla_0312 Campylobacter lari RM2100 hypothetical protein YP_002574923.1 284430 D 306263 CDS YP_002574924.1 222823350 7410221 285246..286019 1 NC_012039.1 Pfam match to PF08241.3 Methyltransf_11; methyltransferase 286019 7410221 Cla_0313 Campylobacter lari RM2100 methyltransferase YP_002574924.1 285246 D 306263 CDS YP_002574925.1 222823351 7410222 286033..288357 1 NC_012039.1 hypothetical protein 288357 7410222 Cla_0314 Campylobacter lari RM2100 hypothetical protein YP_002574925.1 286033 D 306263 CDS YP_002574926.1 222823352 7410223 288354..288953 1 NC_012039.1 Pfam match to PF00117.19 GATase; glutamine amidotransferase 288953 7410223 Cla_0315 Campylobacter lari RM2100 glutamine amidotransferase YP_002574926.1 288354 D 306263 CDS YP_002574927.1 222823353 7410224 288950..289711 1 NC_012039.1 sugar nucleotidyltransferase 289711 7410224 Cla_0316 Campylobacter lari RM2100 sugar nucleotidyltransferase YP_002574927.1 288950 D 306263 CDS YP_002574928.1 222823354 7410225 289708..290214 1 NC_012039.1 converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis; adenylylsulfate kinase 290214 cysC 7410225 cysC Campylobacter lari RM2100 adenylylsulfate kinase YP_002574928.1 289708 D 306263 CDS YP_002574929.1 222823355 7410226 290211..292238 1 NC_012039.1 Pfam matches to PF05159.5 Capsule_synth, and to PF05159.5 Capsule_synth; capsular polysaccharide export protein KpsC 292238 kpsC 7410226 kpsC Campylobacter lari RM2100 capsular polysaccharide export protein KpsC YP_002574929.1 290211 D 306263 CDS YP_002574930.1 222823356 7410227 292235..293413 1 NC_012039.1 Pfam match to PF05159.5 Capsule_synth; capsular polysaccharide export protein KpsS 293413 kpsS 7410227 kpsS Campylobacter lari RM2100 capsular polysaccharide export protein KpsS YP_002574930.1 292235 D 306263 CDS YP_002574931.1 222823357 7410228 complement(293410..294918) 1 NC_012039.1 glycosyltransferase 294918 7410228 Cla_0320 Campylobacter lari RM2100 glycosyltransferase YP_002574931.1 293410 R 306263 CDS YP_002574932.1 222823358 7410229 295083..296213 1 NC_012039.1 hypothetical protein 296213 7410229 Cla_0321 Campylobacter lari RM2100 hypothetical protein YP_002574932.1 295083 D 306263 CDS YP_002574933.1 222823359 7410230 296222..297595 1 NC_012039.1 Pfam match to PF00067.13 p450; cytochrome P450 family protein 297595 7410230 Cla_0322 Campylobacter lari RM2100 cytochrome P450 family protein YP_002574933.1 296222 D 306263 CDS YP_002574934.1 222823360 7410231 297592..297945 1 NC_012039.1 hypothetical protein 297945 7410231 Cla_0323 Campylobacter lari RM2100 hypothetical protein YP_002574934.1 297592 D 306263 CDS YP_002574935.1 222823361 7410232 complement(297942..299033) 1 NC_012039.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 299033 nusA 7410232 nusA Campylobacter lari RM2100 transcription elongation factor NusA YP_002574935.1 297942 R 306263 CDS YP_002574936.1 222823362 7410233 299070..299399 1 NC_012039.1 hypothetical protein 299399 7410233 Cla_0325 Campylobacter lari RM2100 hypothetical protein YP_002574936.1 299070 D 306263 CDS YP_002574937.1 222823363 7410234 299396..300694 1 NC_012039.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 300694 miaB 7410234 miaB Campylobacter lari RM2100 (dimethylallyl)adenosine tRNA methylthiotransferase YP_002574937.1 299396 D 306263 CDS YP_002574938.1 222823364 7410235 300678..301301 1 NC_012039.1 Pfam match to PF04028.4 DUF374; hypothetical protein 301301 7410235 Cla_0327 Campylobacter lari RM2100 hypothetical protein YP_002574938.1 300678 D 306263 CDS YP_002574939.1 222823365 7410236 301307..302272 1 NC_012039.1 hypothetical protein 302272 7410236 Cla_0328 Campylobacter lari RM2100 hypothetical protein YP_002574939.1 301307 D 306263 CDS YP_002574940.1 222823366 7410237 302269..302823 1 NC_012039.1 hypothetical protein 302823 7410237 Cla_0329 Campylobacter lari RM2100 hypothetical protein YP_002574940.1 302269 D 306263 CDS YP_002574941.1 222823367 7410238 302807..303346 1 NC_012039.1 hypothetical protein 303346 7410238 Cla_0330 Campylobacter lari RM2100 hypothetical protein YP_002574941.1 302807 D 306263 CDS YP_002574942.1 222823368 7410239 complement(303333..304130) 1 NC_012039.1 hypothetical protein 304130 7410239 Cla_0331 Campylobacter lari RM2100 hypothetical protein YP_002574942.1 303333 R 306263 CDS YP_002574943.1 222823369 7410240 304203..305018 1 NC_012039.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 305018 lgt 7410240 lgt Campylobacter lari RM2100 prolipoprotein diacylglyceryl transferase YP_002574943.1 304203 D 306263 CDS YP_002574944.1 222823370 7410241 305096..305875 1 NC_012039.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; fumarate reductase cytochrome b-556 subunit 305875 frdC 7410241 frdC Campylobacter lari RM2100 fumarate reductase cytochrome b-556 subunit YP_002574944.1 305096 D 306263 CDS YP_002574945.1 222823371 7410242 305844..307850 1 NC_012039.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 307850 frdA 7410242 frdA Campylobacter lari RM2100 fumarate reductase flavoprotein subunit YP_002574945.1 305844 D 306263 CDS YP_002574946.1 222823372 7410243 307843..308568 1 NC_012039.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit 308568 frdB 7410243 frdB Campylobacter lari RM2100 fumarate reductase iron-sulfur subunit YP_002574946.1 307843 D 306263 CDS YP_002574947.1 222823373 7410244 308546..310771 1 NC_012039.1 Pfam match to PF00350.14 Dynamin_N; ATP/GTP-binding protein 310771 7410244 Cla_0336 Campylobacter lari RM2100 ATP/GTP-binding protein YP_002574947.1 308546 D 306263 CDS YP_002574948.1 222823374 7410245 310761..312578 1 NC_012039.1 ATP/GTP-binding protein 312578 7410245 Cla_0337 Campylobacter lari RM2100 ATP/GTP-binding protein YP_002574948.1 310761 D 306263 CDS YP_002574949.1 222823375 7410246 complement(312581..313240) 1 NC_012039.1 Pfam match to PF04973.3 NMN_transporter; nicotinamide mononucleotide transporter 313240 pnuC 7410246 pnuC Campylobacter lari RM2100 nicotinamide mononucleotide transporter YP_002574949.1 312581 R 306263 CDS YP_002574950.1 222823376 7410247 complement(313271..313777) 1 NC_012039.1 Pfam match to PF01243.11 Pyridox_oxidase; pyridoxamine 5'-phosphate oxidase 313777 7410247 Cla_0339 Campylobacter lari RM2100 pyridoxamine 5'-phosphate oxidase YP_002574950.1 313271 R 306263 CDS YP_002574951.1 222823377 7410248 complement(313781..314362) 1 NC_012039.1 Pfam match to PF02525.8 Flavodoxin_2; modulator of drug activity MdaB 314362 7410248 Cla_0340 Campylobacter lari RM2100 modulator of drug activity MdaB YP_002574951.1 313781 R 306263 CDS YP_002574952.1 222823378 7410249 314462..314791 1 NC_012039.1 Pfam match to PF01638.8 DUF24; MarR family transcriptional regulator 314791 7410249 Cla_0341 Campylobacter lari RM2100 MarR family transcriptional regulator YP_002574952.1 314462 D 306263 CDS YP_002574953.1 222823379 7410250 314788..315240 1 NC_012039.1 Pfam match to PF08212.3 Lipocalin_2; Blc-like protein 315240 7410250 Cla_0342 Campylobacter lari RM2100 Blc-like protein YP_002574953.1 314788 D 306263 CDS YP_002574954.1 222823380 7410251 complement(315237..316319) 1 NC_012039.1 Pfam matches to PF08240.3 ADH_N, and to PF00107.17 ADH_zinc_N; NADP-dependent alcohol dehydrogenase 316319 7410251 Cla_0343 Campylobacter lari RM2100 NADP-dependent alcohol dehydrogenase YP_002574954.1 315237 R 306263 CDS YP_002574955.1 222823381 7410252 316474..318786 1 NC_012039.1 Pfam matches to PF04313.5 HSDR_N, and to PF04851.6 ResIII; type I restriction-modification system, R subunit 318786 hsdR 7410252 hsdR Campylobacter lari RM2100 type I restriction-modification system, R subunit YP_002574955.1 316474 D 306263 CDS YP_002574956.1 222823382 7410253 318797..319399 1 NC_012039.1 hypothetical protein 319399 rloE 7410253 rloE Campylobacter lari RM2100 hypothetical protein YP_002574956.1 318797 D 306263 CDS YP_002574957.1 222823383 7410254 319405..320193 1 NC_012039.1 hypothetical protein 320193 rloG 7410254 rloG Campylobacter lari RM2100 hypothetical protein YP_002574957.1 319405 D 306263 CDS YP_002574958.1 222823384 7410255 320190..321362 1 NC_012039.1 Pfam matches to PF01420.10 Methylase_S, and to PF01420.10 Methylase_S; type I restriction-modification system, S subunit 321362 hsdS 7410255 hsdS Campylobacter lari RM2100 type I restriction-modification system, S subunit YP_002574958.1 320190 D 306263 CDS YP_002574959.1 222823385 7410256 321450..322478 1 NC_012039.1 hypothetical protein 322478 mloC 7410256 mloC Campylobacter lari RM2100 hypothetical protein YP_002574959.1 321450 D 306263 CDS YP_002574960.1 222823386 7410258 complement(323956..325134) 1 NC_012039.1 Pfam matches to PF03453.8 MoeA_N, and to PF00994.15 MoCF_biosynth; molybdopterin biosynthesis protein 325134 moeA1 7410258 moeA1 Campylobacter lari RM2100 molybdopterin biosynthesis protein YP_002574960.1 323956 R 306263 CDS YP_002574961.1 222823387 7410259 complement(325136..325576) 1 NC_012039.1 Pfam match to PF02391.8 MoaE; molybdopterin converting factor, subunit 2 325576 moaE 7410259 moaE Campylobacter lari RM2100 molybdopterin converting factor, subunit 2 YP_002574961.1 325136 R 306263 CDS YP_002574962.1 222823388 7410260 complement(325580..325801) 1 NC_012039.1 Pfam match to PF02597.11 ThiS; molybdopterin converting factor, subunit 1 325801 moaD 7410260 moaD Campylobacter lari RM2100 molybdopterin converting factor, subunit 1 YP_002574962.1 325580 R 306263 CDS YP_002574963.1 222823389 7410261 complement(325813..327357) 1 NC_012039.1 Pfam matches to PF07732.6 Cu-oxidase_3, and to PF07731.5 Cu-oxidase_2; multicopper oxidase 327357 7410261 Cla_0353 Campylobacter lari RM2100 multicopper oxidase YP_002574963.1 325813 R 306263 CDS YP_002574964.1 222823390 7410262 327484..328647 1 NC_012039.1 Pfam match to PF00278.13 Orn_DAP_Arg_deC; carboxynorspermidine decarboxylase 328647 nspC 7410262 nspC Campylobacter lari RM2100 carboxynorspermidine decarboxylase YP_002574964.1 327484 D 306263 CDS YP_002574965.1 222823391 7410263 328784..329713 1 NC_012039.1 formate dehydrogenase, cytochrome b subunit 329713 fdhC 7410263 fdhC Campylobacter lari RM2100 formate dehydrogenase, cytochrome b subunit YP_002574965.1 328784 D 306263 CDS YP_002574966.1 222823392 7410264 329777..330457 1 NC_012039.1 hypothetical protein 330457 7410264 Cla_0356 Campylobacter lari RM2100 hypothetical protein YP_002574966.1 329777 D 306263 CDS YP_002574967.1 222823393 7410265 330634..330837 1 NC_012039.1 hypothetical protein 330837 7410265 Cla_0357 Campylobacter lari RM2100 hypothetical protein YP_002574967.1 330634 D 306263 CDS YP_002574968.1 222823394 7410266 330854..333676 1 NC_012039.1 Pfam matches to PF04879.7 Molybdop_Fe4S4, and to PF00384.13 Molybdopterin; formate dehydrogenase, alpha subunit (selenocysteine-containing) 333676 fdhA 7410266 fdhA Campylobacter lari RM2100 formate dehydrogenase, alpha subunit (selenocysteine-containing) YP_002574968.1 330854 D 306263 CDS YP_002574969.1 222823395 7410267 333688..334257 1 NC_012039.1 Pfam match to PF00037.18 Fer4; formate dehydrogenase, beta (iron-sulfur) subunit 334257 fdhB 7410267 fdhB Campylobacter lari RM2100 formate dehydrogenase, beta (iron-sulfur) subunit YP_002574969.1 333688 D 306263 CDS YP_002574970.1 222823396 7410268 334312..335040 1 NC_012039.1 Pfam match to PF00126.18 HTH_1; ModE family transcriptional regulator 335040 7410268 Cla_0360 Campylobacter lari RM2100 ModE family transcriptional regulator YP_002574970.1 334312 D 306263 CDS YP_002574971.1 222823397 7410269 335088..335666 1 NC_012039.1 Pfam match to PF01206.8 SirA; transcriptional regulator 335666 7410269 Cla_0361 Campylobacter lari RM2100 transcriptional regulator YP_002574971.1 335088 D 306263 CDS YP_002574972.1 222823398 7410270 335732..336694 1 NC_012039.1 Pfam match to PF02769.13 AIRS_C; selenide, water dikinase ( start at 335663) 336694 selD 7410270 selD Campylobacter lari RM2100 selenide, water dikinase ( start at 335663) YP_002574972.1 335732 D 306263 CDS YP_002574973.1 222823399 7410271 336835..340332 1 NC_012039.1 Pfam matches to PF01619.9 Pro_dh, and to PF00171.13 Aldedh; proline dehydrogenase 340332 putA 7410271 putA Campylobacter lari RM2100 proline dehydrogenase YP_002574973.1 336835 D 306263 CDS YP_002574974.1 222823400 7410272 340346..341827 1 NC_012039.1 Pfam match to PF00474.8 SSF; sodium/proline symporter 341827 putP 7410272 putP Campylobacter lari RM2100 sodium/proline symporter YP_002574974.1 340346 D 306263 CDS YP_002574975.1 222823401 7410273 complement(341843..342070) 1 NC_012039.1 Pfam match to PF01206.8 SirA; hypothetical protein 342070 7410273 Cla_0365 Campylobacter lari RM2100 hypothetical protein YP_002574975.1 341843 R 306263 CDS YP_002574976.1 222823402 7410274 complement(342067..343281) 1 NC_012039.1 Pfam matches to PF04143.5 DUF395, and to PF04143.5 DUF395; hypothetical protein 343281 7410274 Cla_0366 Campylobacter lari RM2100 hypothetical protein YP_002574976.1 342067 R 306263 CDS YP_002574977.1 222823403 7410276 343567..344817 1 NC_012039.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 344817 purA 7410276 purA Campylobacter lari RM2100 adenylosuccinate synthetase YP_002574977.1 343567 D 306263 CDS YP_002574978.1 222823404 7410277 344814..345233 1 NC_012039.1 hypothetical protein 345233 7410277 Cla_0369 Campylobacter lari RM2100 hypothetical protein YP_002574978.1 344814 D 306263 CDS YP_002574979.1 222823405 7410278 345233..345748 1 NC_012039.1 hypothetical protein 345748 7410278 Cla_0370 Campylobacter lari RM2100 hypothetical protein YP_002574979.1 345233 D 306263 CDS YP_002574980.1 222823406 7410279 345810..346361 1 NC_012039.1 Pfam match to PF04368.4 DUF507; hypothetical protein 346361 7410279 Cla_0371 Campylobacter lari RM2100 hypothetical protein YP_002574980.1 345810 D 306263 CDS YP_002574981.1 222823407 7410280 346358..347476 1 NC_012039.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 347476 pyrAa 7410280 pyrAa Campylobacter lari RM2100 carbamoyl phosphate synthase small subunit YP_002574981.1 346358 D 306263 CDS YP_002574982.1 222823408 7410281 347473..348135 1 NC_012039.1 hypothetical protein 348135 7410281 Cla_0373 Campylobacter lari RM2100 hypothetical protein YP_002574982.1 347473 D 306263 CDS YP_002574983.1 222823409 7410282 348259..349725 1 NC_012039.1 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 349725 ccoN 7410282 ccoN Campylobacter lari RM2100 cbb3-type cytochrome c oxidase subunit I YP_002574983.1 348259 D 306263 CDS YP_002574984.1 222823410 7410283 349737..350402 1 NC_012039.1 CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 350402 ccoO 7410283 ccoO Campylobacter lari RM2100 cbb3-type cytochrome c oxidase subunit II YP_002574984.1 349737 D 306263 CDS YP_002574985.1 222823411 7410284 350411..350614 1 NC_012039.1 Pfam match to PF09672.1 Cbb3_Q_epsi; cytochrome c oxidase, cbb3-type, subunit IV 350614 ccoQ 7410284 ccoQ Campylobacter lari RM2100 cytochrome c oxidase, cbb3-type, subunit IV YP_002574985.1 350411 D 306263 CDS YP_002574986.1 222823412 7410285 350614..351492 1 NC_012039.1 Pfam matches to PF00034.12 Cytochrom_C, and to PF00034.12 Cytochrom_C; cytochrome c oxidase, cbb3-type, subunit III 351492 ccoP 7410285 ccoP Campylobacter lari RM2100 cytochrome c oxidase, cbb3-type, subunit III YP_002574986.1 350614 D 306263 CDS YP_002574987.1 222823413 7410286 351492..351704 1 NC_012039.1 hypothetical protein 351704 7410286 Cla_0378 Campylobacter lari RM2100 hypothetical protein YP_002574987.1 351492 D 306263 CDS YP_002574988.1 222823414 7410287 351847..352392 1 NC_012039.1 hypothetical protein 352392 7410287 Cla_0379 Campylobacter lari RM2100 hypothetical protein YP_002574988.1 351847 D 306263 CDS YP_002574989.1 222823415 7410288 352382..352894 1 NC_012039.1 hypothetical protein 352894 7410288 Cla_0380 Campylobacter lari RM2100 hypothetical protein YP_002574989.1 352382 D 306263 CDS YP_002574990.1 222823416 7410289 352894..355278 1 NC_012039.1 hypothetical protein 355278 7410289 Cla_0381 Campylobacter lari RM2100 hypothetical protein YP_002574990.1 352894 D 306263 CDS YP_002574991.1 222823417 7410290 355275..358022 1 NC_012039.1 Pfam match to PF00580.12 UvrD-helicase; recombination protein RecB 358022 7410290 Cla_0382 Campylobacter lari RM2100 recombination protein RecB YP_002574991.1 355275 D 306263 CDS YP_002574992.1 222823418 7410291 358772..360742 1 NC_012039.1 Pfam matches to PF02743.9 Cache_1, and to PF00672.16 HAMP; MCP-domain signal transduction protein 360742 7410291 Cla_0383 Campylobacter lari RM2100 MCP-domain signal transduction protein YP_002574992.1 358772 D 306263 CDS YP_002574993.1 222823419 7410292 360901..361329 1 NC_012039.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 361329 rplM 7410292 rplM Campylobacter lari RM2100 50S ribosomal protein L13 YP_002574993.1 360901 D 306263 CDS YP_002574994.1 222823420 7410293 361332..361721 1 NC_012039.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 361721 rpsI 7410293 rpsI Campylobacter lari RM2100 30S ribosomal protein S9 YP_002574994.1 361332 D 306263 CDS YP_002574995.1 222823421 7410294 361968..362954 1 NC_012039.1 Pfam match to PF00691.11 OmpA; outer membrane fibronectin-binding protein 362954 cadF 7410294 cadF Campylobacter lari RM2100 outer membrane fibronectin-binding protein YP_002574995.1 361968 D 306263 CDS YP_002574996.1 222823422 7410295 362958..363602 1 NC_012039.1 Pfam match to PF00702.17 Hydrolase; HAD superfamily hydrolase 363602 7410295 Cla_0387 Campylobacter lari RM2100 HAD superfamily hydrolase YP_002574996.1 362958 D 306263 CDS YP_002574997.1 222823423 7410296 363720..367274 1 NC_012039.1 Pfam matches to PF01855.10 POR_N, and to PF01558.9 POR; pyruvate ferredoxin/flavodoxin oxidoreductase 367274 7410296 Cla_0388 Campylobacter lari RM2100 pyruvate ferredoxin/flavodoxin oxidoreductase YP_002574997.1 363720 D 306263 CDS YP_002574998.1 222823424 7410297 367278..367601 1 NC_012039.1 hypothetical protein 367601 7410297 Cla_0389 Campylobacter lari RM2100 hypothetical protein YP_002574998.1 367278 D 306263 CDS YP_002574999.1 222823425 7410298 367573..368964 1 NC_012039.1 Pfam match to PF00263.12 Secretin; type II protein secretion system D protein CtsD 368964 ctsD 7410298 ctsD Campylobacter lari RM2100 type II protein secretion system D protein CtsD YP_002574999.1 367573 D 306263 CDS YP_002575000.1 222823426 7410299 368945..369274 1 NC_012039.1 transformation system protein CtsG 369274 ctsX 7410299 ctsX Campylobacter lari RM2100 transformation system protein CtsG YP_002575000.1 368945 D 306263 CDS YP_002575001.1 222823427 7410300 369267..370781 1 NC_012039.1 Pfam match to PF00437.11 GSPII_E; type II protein secretion system E protein CtsE 370781 ctsE 7410300 ctsE Campylobacter lari RM2100 type II protein secretion system E protein CtsE YP_002575001.1 369267 D 306263 CDS YP_002575002.1 222823428 7410301 370973..371938 1 NC_012039.1 pseudogene; Pfam match to PF00482.14 GSPII_F; type II protein secretion system F protein CtsF 371938 ctsF 7410301 ctsF Campylobacter lari RM2100 type II protein secretion system F protein CtsF YP_002575002.1 370973 D 306263 CDS YP_002575003.1 222823429 7410302 complement(371935..372687) 1 NC_012039.1 Pfam match to PF01925.10 DUF81; hypothetical protein 372687 7410302 Cla_0394 Campylobacter lari RM2100 hypothetical protein YP_002575003.1 371935 R 306263 CDS YP_002575004.1 222823430 7410303 complement(372672..373421) 1 NC_012039.1 Pfam match to PF09674.1 CHP02757; hypothetical protein 373421 7410303 Cla_0395 Campylobacter lari RM2100 hypothetical protein YP_002575004.1 372672 R 306263 CDS YP_002575005.1 222823431 7410304 complement(373421..375250) 1 NC_012039.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 375250 flgK 7410304 flgK Campylobacter lari RM2100 flagellar hook-associated protein FlgK YP_002575005.1 373421 R 306263 CDS YP_002575006.1 222823432 7410305 complement(375261..375695) 1 NC_012039.1 hypothetical protein 375695 7410305 Cla_0397 Campylobacter lari RM2100 hypothetical protein YP_002575006.1 375261 R 306263 CDS YP_002575007.1 222823433 7410306 complement(375738..375944) 1 NC_012039.1 hypothetical protein 375944 7410306 Cla_0398 Campylobacter lari RM2100 hypothetical protein YP_002575007.1 375738 R 306263 CDS YP_002575008.1 222823434 7410307 complement(376005..376370) 1 NC_012039.1 hypothetical protein 376370 7410307 Cla_0399 Campylobacter lari RM2100 hypothetical protein YP_002575008.1 376005 R 306263 CDS YP_002575009.1 222823435 7410308 complement(376370..377416) 1 NC_012039.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring biosynthesis protein FlgA 377416 flgI 7410308 flgI Campylobacter lari RM2100 flagellar basal body P-ring biosynthesis protein FlgA YP_002575009.1 376370 R 306263 CDS YP_002575010.1 222823436 7410309 complement(377474..378130) 1 NC_012039.1 Pfam match to PF03602.6 Cons_hypoth95; methylase 378130 7410309 Cla_0401 Campylobacter lari RM2100 methylase YP_002575010.1 377474 R 306263 CDS YP_002575011.1 222823437 7410310 complement(378123..378518) 1 NC_012039.1 hypothetical protein 378518 7410310 Cla_0402 Campylobacter lari RM2100 hypothetical protein YP_002575011.1 378123 R 306263 CDS YP_002575012.1 222823438 7410311 complement(378502..379206) 1 NC_012039.1 hypothetical protein 379206 7410311 Cla_0403 Campylobacter lari RM2100 hypothetical protein YP_002575012.1 378502 R 306263 CDS YP_002575013.1 222823439 7410312 complement(379217..379855) 1 NC_012039.1 hypothetical protein 379855 7410312 Cla_0404 Campylobacter lari RM2100 hypothetical protein YP_002575013.1 379217 R 306263 CDS YP_002575014.1 222823440 7410313 379953..380774 1 NC_012039.1 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 380774 thiL 7410313 thiL Campylobacter lari RM2100 thiamine monophosphate kinase YP_002575014.1 379953 D 306263 CDS YP_002575015.1 222823441 7411049 380752..381879 1 NC_012039.1 catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D 381879 truD 7411049 truD Campylobacter lari RM2100 tRNA pseudouridine synthase D YP_002575015.1 380752 D 306263 CDS YP_002575016.1 222823442 7411144 381967..382284 1 NC_012039.1 hypothetical protein 382284 7411144 Cla_0407 Campylobacter lari RM2100 hypothetical protein YP_002575016.1 381967 D 306263 CDS YP_002575017.1 222823443 7411145 382286..382978 1 NC_012039.1 hypothetical protein 382978 7411145 Cla_0408 Campylobacter lari RM2100 hypothetical protein YP_002575017.1 382286 D 306263 CDS YP_002575018.1 222823444 7411146 382979..383470 1 NC_012039.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA 383470 fldA 7411146 fldA Campylobacter lari RM2100 flavodoxin FldA YP_002575018.1 382979 D 306263 CDS YP_002575019.1 222823445 7411147 complement(383483..383896) 1 NC_012039.1 hypothetical protein 383896 7411147 Cla_0410 Campylobacter lari RM2100 hypothetical protein YP_002575019.1 383483 R 306263 CDS YP_002575020.1 222823446 7411148 complement(383889..384599) 1 NC_012039.1 hypothetical protein 384599 7411148 Cla_0411 Campylobacter lari RM2100 hypothetical protein YP_002575020.1 383889 R 306263 CDS YP_002575021.1 222823447 7411149 complement(384596..385309) 1 NC_012039.1 Pfam match to PF08761.2 dUTPase_2; deoxyuridine triphosphatase domain protein 385309 7411149 Cla_0412 Campylobacter lari RM2100 deoxyuridine triphosphatase domain protein YP_002575021.1 384596 R 306263 CDS YP_002575022.1 222823448 7411150 complement(385302..385847) 1 NC_012039.1 ATP/GTP-binding protein 385847 7411150 Cla_0413 Campylobacter lari RM2100 ATP/GTP-binding protein YP_002575022.1 385302 R 306263 CDS YP_002575023.1 222823449 7411151 complement(385975..387609) 1 NC_012039.1 Pfam matches to PF08425.1 NiFe_dehyd_N, and to PF01058.13 Oxidored_q6; quinone-reactive Ni/Fe-hydrogenase, small subunit 387609 hydA 7411151 hydA Campylobacter lari RM2100 quinone-reactive Ni/Fe-hydrogenase, small subunit YP_002575023.1 385975 R 306263 CDS YP_002575024.1 222823450 7411152 complement(387614..388294) 1 NC_012039.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 388294 tpiA 7411152 tpiA Campylobacter lari RM2100 triosephosphate isomerase YP_002575024.1 387614 R 306263 CDS YP_002575025.1 222823451 7411153 complement(388291..389493) 1 NC_012039.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 389493 pgk 7411153 pgk Campylobacter lari RM2100 phosphoglycerate kinase YP_002575025.1 388291 R 306263 CDS YP_002575026.1 222823452 7411154 complement(389495..390490) 1 NC_012039.1 Pfam matches to PF00044.15 Gp_dh_N, and to PF02800.11 Gp_dh_C; glyceraldehyde-3-phosphate dehydrogenase 390490 gapA 7411154 gapA Campylobacter lari RM2100 glyceraldehyde-3-phosphate dehydrogenase YP_002575026.1 389495 R 306263 CDS YP_002575027.1 222823453 7411155 390550..391095 1 NC_012039.1 Pfam match to PF01467.17 CTP_transf_2; nicotinate (nicotinamide) nucleotide adenylyltransferase 391095 7411155 Cla_0418 Campylobacter lari RM2100 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_002575027.1 390550 D 306263 CDS YP_002575028.1 222823454 7411156 391109..391438 1 NC_012039.1 Pfam match to PF02410.6 DUF143; hypothetical protein 391438 7411156 Cla_0419 Campylobacter lari RM2100 hypothetical protein YP_002575028.1 391109 D 306263 CDS YP_002575029.1 222823455 7411157 391448..393823 1 NC_012039.1 Pfam matches to PF00515.19 TPR_1, and to PF00515.19 TPR_1; hypothetical protein 393823 7411157 Cla_0420 Campylobacter lari RM2100 hypothetical protein YP_002575029.1 391448 D 306263 CDS YP_002575030.1 222823456 7411158 complement(393825..394199) 1 NC_012039.1 hypothetical protein 394199 7411158 Cla_0421 Campylobacter lari RM2100 hypothetical protein YP_002575030.1 393825 R 306263 CDS YP_002575031.1 222823457 7411159 complement(394263..395828) 1 NC_012039.1 hypothetical protein 395828 7411159 Cla_0422 Campylobacter lari RM2100 hypothetical protein YP_002575031.1 394263 R 306263 CDS YP_002575032.1 222823458 7411160 complement(395821..396195) 1 NC_012039.1 HIT family hydrolase 396195 7411160 Cla_0423 Campylobacter lari RM2100 HIT family hydrolase YP_002575032.1 395821 R 306263 CDS YP_002575033.1 222823459 7411161 complement(396239..397630) 1 NC_012039.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 397630 fumC 7411161 fumC Campylobacter lari RM2100 fumarate hydratase YP_002575033.1 396239 R 306263 CDS YP_002575034.1 222823460 7411162 complement(397759..399558) 1 NC_012039.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 399558 glmS 7411162 glmS Campylobacter lari RM2100 glucosamine--fructose-6-phosphate aminotransferase YP_002575034.1 397759 R 306263 CDS YP_002575035.1 222823461 7411163 complement(399562..401955) 1 NC_012039.1 nucleotidyltransferase, GlnD family 401955 7411163 Cla_0426 Campylobacter lari RM2100 nucleotidyltransferase, GlnD family YP_002575035.1 399562 R 306263 CDS YP_002575036.1 222823462 7411164 402032..403096 1 NC_012039.1 Pfam match to PF04055.12 Radical_SAM; hypothetical protein 403096 7411164 Cla_0427 Campylobacter lari RM2100 hypothetical protein YP_002575036.1 402032 D 306263 CDS YP_002575037.1 222823463 7411165 403105..404427 1 NC_012039.1 Pfam match to PF00860.11 Xan_ur_permease; xanthine/uracil permease 404427 7411165 Cla_0428 Campylobacter lari RM2100 xanthine/uracil permease YP_002575037.1 403105 D 306263 CDS YP_002575038.1 222823464 7411166 404429..404869 1 NC_012039.1 Pfam match to PF00156.18 Pribosyltran; nucleotide phosphoribosyltransferase 404869 7411166 Cla_0429 Campylobacter lari RM2100 nucleotide phosphoribosyltransferase YP_002575038.1 404429 D 306263 CDS YP_002575039.1 222823465 7411167 404931..407330 1 NC_012039.1 Pfam matches to PF00384.13 Molybdopterin, and to PF01568.12 Molydop_binding; biotin sulfoxide reductase 407330 bisC 7411167 bisC Campylobacter lari RM2100 biotin sulfoxide reductase YP_002575039.1 404931 D 306263 CDS YP_002575040.1 222823466 7411168 407333..407866 1 NC_012039.1 hypothetical protein 407866 7411168 Cla_0431 Campylobacter lari RM2100 hypothetical protein YP_002575040.1 407333 D 306263 CDS YP_002575041.1 222823467 7411169 407873..409030 1 NC_012039.1 hypothetical protein 409030 7411169 Cla_0432 Campylobacter lari RM2100 hypothetical protein YP_002575041.1 407873 D 306263 CDS YP_002575042.1 222823468 7411170 409027..409767 1 NC_012039.1 Pfam match to PF07963.3 N_methyl; hypothetical protein 409767 7411170 Cla_0433 Campylobacter lari RM2100 hypothetical protein YP_002575042.1 409027 D 306263 CDS YP_002575043.1 222823469 7411171 410165..411442 1 NC_012039.1 Pfam match to PF05538.2 Campylo_MOMP; major outer membrane protein 411442 porA1 7411171 porA1 Campylobacter lari RM2100 major outer membrane protein YP_002575043.1 410165 D 306263 CDS YP_002575044.1 222823470 7411172 complement(411466..412206) 1 NC_012039.1 Pfam match to PF03883.5 DUF328; hypothetical protein 412206 7411172 Cla_0435 Campylobacter lari RM2100 hypothetical protein YP_002575044.1 411466 R 306263 CDS YP_002575045.1 222823471 7411177 412837..414036 1 NC_012039.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 414036 tuf 7411177 tuf Campylobacter lari RM2100 elongation factor Tu YP_002575045.1 412837 D 306263 CDS YP_002575046.1 222823472 7411178 414076..414234 1 NC_012039.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 414234 rpmG 7411178 rpmG Campylobacter lari RM2100 50S ribosomal protein L33 YP_002575046.1 414076 D 306263 CDS YP_002575047.1 222823473 7411180 414348..414530 1 NC_012039.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 414530 secE 7411180 secE Campylobacter lari RM2100 preprotein translocase subunit SecE YP_002575047.1 414348 D 306263 CDS YP_002575048.1 222823474 7411181 414535..415065 1 NC_012039.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 415065 nusG 7411181 nusG Campylobacter lari RM2100 transcription antitermination protein NusG YP_002575048.1 414535 D 306263 CDS YP_002575049.1 222823475 7411182 415089..415514 1 NC_012039.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 415514 rplK 7411182 rplK Campylobacter lari RM2100 50S ribosomal protein L11 YP_002575049.1 415089 D 306263 CDS YP_002575050.1 222823476 7411183 415578..416279 1 NC_012039.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 416279 rplA 7411183 rplA Campylobacter lari RM2100 50S ribosomal protein L1 YP_002575050.1 415578 D 306263 CDS YP_002575051.1 222823477 7411184 416434..416913 1 NC_012039.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 416913 rplJ 7411184 rplJ Campylobacter lari RM2100 50S ribosomal protein L10 YP_002575051.1 416434 D 306263 CDS YP_002575052.1 222823478 7411185 416932..417309 1 NC_012039.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 417309 rplL 7411185 rplL Campylobacter lari RM2100 50S ribosomal protein L7/L12 YP_002575052.1 416932 D 306263 CDS YP_002575053.1 222823479 7411186 417406..421539 1 NC_012039.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 421539 rpoB 7411186 rpoB Campylobacter lari RM2100 DNA-directed RNA polymerase subunit beta YP_002575053.1 417406 D 306263 CDS YP_002575054.1 222823480 7411187 421532..426085 1 NC_012039.1 Pfam matches to PF04997.3 RNA_pol_Rpb1_1, and to PF00623.11 RNA_pol_Rpb1_2; DNA-directed RNA polymerase, beta' chain 426085 rpoC 7411187 rpoC Campylobacter lari RM2100 DNA-directed RNA polymerase, beta' chain YP_002575054.1 421532 D 306263 CDS YP_002575055.1 222823481 7411188 426212..426595 1 NC_012039.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 426595 rpsL 7411188 rpsL Campylobacter lari RM2100 30S ribosomal protein S12 YP_002575055.1 426212 D 306263 CDS YP_002575056.1 222823482 7411189 426663..427133 1 NC_012039.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 427133 rpsG 7411189 rpsG Campylobacter lari RM2100 30S ribosomal protein S7 YP_002575056.1 426663 D 306263 CDS YP_002575057.1 222823483 7411190 427146..429221 1 NC_012039.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 429221 fusA 7411190 fusA Campylobacter lari RM2100 elongation factor G YP_002575057.1 427146 D 306263 CDS YP_002575058.1 222823484 7411191 complement(429540..429809) 1 NC_012039.1 hypothetical protein 429809 7411191 Cla_0454 Campylobacter lari RM2100 hypothetical protein YP_002575058.1 429540 R 306263 CDS YP_002575059.1 222823485 7411192 complement(429796..431166) 1 NC_012039.1 Pfam matches to PF01595.11 DUF21, and to PF00571.19 CBS; efflux protein (DUF21 domain protein) 431166 7411192 Cla_0455 Campylobacter lari RM2100 efflux protein (DUF21 domain protein) YP_002575059.1 429796 R 306263 CDS YP_002575060.1 222823486 7411193 complement(431245..432225) 1 NC_012039.1 in Escherichia coli SbmA is involved in uptake of microcin J25; functions along with FhuA, TonB, and ExbB/D in this capacity; in Sinorhizobium meliloti, BacA is essential and required for symbiosis; defects appear to affect the cell envelope; transporter 432225 7411193 Cla_0456 Campylobacter lari RM2100 transporter YP_002575060.1 431245 R 306263 CDS YP_002575061.1 222823487 7411194 complement(432226..433704) 1 NC_012039.1 Pfam match to PF00474.8 SSF; sodium/proline symporter 433704 7411194 Cla_0457 Campylobacter lari RM2100 sodium/proline symporter YP_002575061.1 432226 R 306263 CDS YP_002575062.1 222823488 7411195 433847..435052 1 NC_012039.1 Pfam match to PF03435.9 Saccharop_dh; saccharopine dehydrogenase 435052 7411195 Cla_0458 Campylobacter lari RM2100 saccharopine dehydrogenase YP_002575062.1 433847 D 306263 CDS YP_002575063.1 222823489 7411196 435088..435765 1 NC_012039.1 Pfam match to PF00528.13 BPD_transp_1; molybdenum ABC transporter permease 435765 modB 7411196 modB Campylobacter lari RM2100 molybdenum ABC transporter permease YP_002575063.1 435088 D 306263 CDS YP_002575064.1 222823490 7411202 442827..443372 1 NC_012039.1 Pfam match to PF04214.4 DUF411; hypothetical protein 443372 7411202 Cla_0465 Campylobacter lari RM2100 hypothetical protein YP_002575064.1 442827 D 306263 CDS YP_002575065.1 222823491 7411203 complement(443383..444036) 1 NC_012039.1 Pfam match to PF03544.5 TonB; TonB domain protein 444036 tonB2 7411203 tonB2 Campylobacter lari RM2100 TonB domain protein YP_002575065.1 443383 R 306263 CDS YP_002575066.1 222823492 7411204 complement(444033..444422) 1 NC_012039.1 Pfam match to PF02472.7 ExbD; TonB system transport protein ExbD 444422 exbD2 7411204 exbD2 Campylobacter lari RM2100 TonB system transport protein ExbD YP_002575066.1 444033 R 306263 CDS YP_002575067.1 222823493 7411205 complement(444415..444846) 1 NC_012039.1 Pfam match to PF01618.7 MotA_ExbB; TonB system transport protein ExbB 444846 exbB2 7411205 exbB2 Campylobacter lari RM2100 TonB system transport protein ExbB YP_002575067.1 444415 R 306263 CDS YP_002575068.1 222823494 7411206 445000..447096 1 NC_012039.1 Pfam matches to PF07715.6 Plug, and to PF00593.15 TonB_dep_Rec; iron-regulated outer membrane virulence protein, TonB receptor CfrA 447096 7411206 Cla_0469 Campylobacter lari RM2100 iron-regulated outer membrane virulence protein, TonB receptor CfrA YP_002575068.1 445000 D 306263 CDS YP_002575069.1 222823495 7411207 complement(447093..448625) 1 NC_012039.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 448625 dnaX 7411207 dnaX Campylobacter lari RM2100 DNA polymerase III subunits gamma and tau YP_002575069.1 447093 R 306263 CDS YP_002575070.1 222823496 7411208 complement(448628..449932) 1 NC_012039.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 449932 rho 7411208 rho Campylobacter lari RM2100 transcription termination factor Rho YP_002575070.1 448628 R 306263 CDS YP_002575071.1 222823497 7411209 450107..452452 1 NC_012039.1 Pfam matches to PF00122.11 E1-E2_ATPase, and to PF00702.17 Hydrolase; heavy metal translocating P-type ATPase 452452 7411209 Cla_0472 Campylobacter lari RM2100 heavy metal translocating P-type ATPase YP_002575071.1 450107 D 306263 CDS YP_002575072.1 222823498 7411210 452449..452655 1 NC_012039.1 Pfam match to PF03597.6 CcoS; hypothetical protein 452655 7411210 Cla_0473 Campylobacter lari RM2100 hypothetical protein YP_002575072.1 452449 D 306263 CDS YP_002575073.1 222823499 7411211 complement(452668..452973) 1 NC_012039.1 Pfam match to PF00034.12 Cytochrom_C; cytochrome c family protein 452973 7411211 Cla_0474 Campylobacter lari RM2100 cytochrome c family protein YP_002575073.1 452668 R 306263 CDS YP_002575074.1 222823500 7411212 453104..453619 1 NC_012039.1 pseudogene; Pfam match to PF08645.2 PNK3P; phosphatase 453619 7411212 Cla_0475 Campylobacter lari RM2100 phosphatase YP_002575074.1 453104 D 306263 CDS YP_002575075.1 222823501 7411213 453616..454569 1 NC_012039.1 Pfam match to PF01370.12 Epimerase; ADP-L-glycero-D-manno-heptose-6-epimerase 454569 waaD 7411213 waaD Campylobacter lari RM2100 ADP-L-glycero-D-manno-heptose-6-epimerase YP_002575075.1 453616 D 306263 CDS YP_002575076.1 222823502 7411214 454562..455935 1 NC_012039.1 Pfam matches to PF00294.15 PfkB, and to PF01467.17 CTP_transf_2; D,D-heptose 1-phosphate adenosyltransferase/7-phosphate kinase 455935 waaE 7411214 waaE Campylobacter lari RM2100 D,D-heptose 1-phosphate adenosyltransferase/7-phosphate kinase YP_002575076.1 454562 D 306263 CDS YP_002575077.1 222823503 7411215 455925..456485 1 NC_012039.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 456485 gmhA 7411215 gmhA Campylobacter lari RM2100 phosphoheptose isomerase YP_002575077.1 455925 D 306263 CDS YP_002575078.1 222823504 7411216 complement(456493..457944) 1 NC_012039.1 Pfam matches to PF00224.12 PK, and to PF02887.7 PK_C; pyruvate kinase 457944 pyk 7411216 pyk Campylobacter lari RM2100 pyruvate kinase YP_002575078.1 456493 R 306263 CDS YP_002575079.1 222823505 7411217 complement(457957..459303) 1 NC_012039.1 Pfam match to PF01266.15 DAO; malate:quinone oxidoreductase 459303 mqo 7411217 mqo Campylobacter lari RM2100 malate:quinone oxidoreductase YP_002575079.1 457957 R 306263 CDS YP_002575080.1 222823506 7411218 complement(459411..460034) 1 NC_012039.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 460034 7411218 Cla_0481 Campylobacter lari RM2100 pantothenate kinase YP_002575080.1 459411 R 306263 CDS YP_002575081.1 222823507 7411219 complement(460021..460353) 1 NC_012039.1 hypothetical protein 460353 7411219 Cla_0482 Campylobacter lari RM2100 hypothetical protein YP_002575081.1 460021 R 306263 CDS YP_002575082.1 222823508 7411220 complement(460355..461350) 1 NC_012039.1 hypothetical protein 461350 7411220 Cla_0483 Campylobacter lari RM2100 hypothetical protein YP_002575082.1 460355 R 306263 CDS YP_002575083.1 222823509 7411221 complement(461347..461892) 1 NC_012039.1 hypothetical protein 461892 7411221 Cla_0484 Campylobacter lari RM2100 hypothetical protein YP_002575083.1 461347 R 306263 CDS YP_002575084.1 222823510 7411222 462042..462329 1 NC_012039.1 Pfam match to PF02686.6 Glu-tRNAGln; glu-tRNAGln amidotransferase, subunit C 462329 gatC 7411222 gatC Campylobacter lari RM2100 glu-tRNAGln amidotransferase, subunit C YP_002575084.1 462042 D 306263 CDS YP_002575085.1 222823511 7411223 462351..462920 1 NC_012039.1 Pfam match to PF02674.7 Colicin_V; hypothetical protein 462920 7411223 Cla_0486 Campylobacter lari RM2100 hypothetical protein YP_002575085.1 462351 D 306263 CDS YP_002575086.1 222823512 7411224 462910..463365 1 NC_012039.1 Pfam match to PF01475.10 FUR; ferric uptake regulation protein 463365 fur 7411224 fur Campylobacter lari RM2100 ferric uptake regulation protein YP_002575086.1 462910 D 306263 CDS YP_002575087.1 222823513 7411225 463376..464878 1 NC_012039.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 464878 lysS 7411225 lysS Campylobacter lari RM2100 lysyl-tRNA synthetase YP_002575087.1 463376 D 306263 CDS YP_002575088.1 222823514 7409905 464879..466120 1 NC_012039.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 466120 glyA 7409905 glyA Campylobacter lari RM2100 serine hydroxymethyltransferase YP_002575088.1 464879 D 306263 CDS YP_002575089.1 222823515 7411050 466117..466662 1 NC_012039.1 Pfam match to PF08966.2 DUF1882; hypothetical protein 466662 7411050 Cla_0490 Campylobacter lari RM2100 hypothetical protein YP_002575089.1 466117 D 306263 CDS YP_002575090.1 222823516 7411051 466680..467486 1 NC_012039.1 Pfam match to PF05036.4 SPOR; hypothetical protein 467486 7411051 Cla_0491 Campylobacter lari RM2100 hypothetical protein YP_002575090.1 466680 D 306263 CDS YP_002575091.1 222823517 7411052 467483..468268 1 NC_012039.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 468268 aroE 7411052 aroE Campylobacter lari RM2100 shikimate 5-dehydrogenase YP_002575091.1 467483 D 306263 CDS YP_002575092.1 222823518 7411053 complement(468262..469383) 1 NC_012039.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ 469383 dnaJ 7411053 dnaJ Campylobacter lari RM2100 molecular chaperone DnaJ YP_002575092.1 468262 R 306263 CDS YP_002575093.1 222823519 7411054 469497..470168 1 NC_012039.1 Pfam matches to PF00072.15 Response_reg, and to PF00486.19 Trans_reg_C; two-component response regulator 470168 racR 7411054 racR Campylobacter lari RM2100 two-component response regulator YP_002575093.1 469497 D 306263 CDS YP_002575094.1 222823520 7411055 470165..471397 1 NC_012039.1 Pfam match to PF02518.17 HATPase_c; two-component sensor histidine kinase 471397 racS 7411055 racS Campylobacter lari RM2100 two-component sensor histidine kinase YP_002575094.1 470165 D 306263 CDS YP_002575095.1 222823521 7411056 471399..471971 1 NC_012039.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 471971 recR 7411056 recR Campylobacter lari RM2100 recombination protein RecR YP_002575095.1 471399 D 306263 CDS YP_002575096.1 222823522 7411057 complement(471958..472986) 1 NC_012039.1 hypothetical protein 472986 7411057 Cla_0497 Campylobacter lari RM2100 hypothetical protein YP_002575096.1 471958 R 306263 CDS YP_002575097.1 222823523 7411058 complement(472983..474776) 1 NC_012039.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 474776 uvrC 7411058 uvrC Campylobacter lari RM2100 excinuclease ABC subunit C YP_002575097.1 472983 R 306263 CDS YP_002575098.1 222823524 7411059 complement(474769..475221) 1 NC_012039.1 hypothetical protein 475221 7411059 Cla_0499 Campylobacter lari RM2100 hypothetical protein YP_002575098.1 474769 R 306263 CDS YP_002575099.1 222823525 7411060 475356..476714 1 NC_012039.1 Pfam match to PF03600.7 CitMHS; Na+/H+ antiporter 476714 nhaD 7411060 nhaD Campylobacter lari RM2100 Na+/H+ antiporter YP_002575099.1 475356 D 306263 CDS YP_002575100.1 222823526 7411061 476724..478259 1 NC_012039.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 478259 guaA 7411061 guaA Campylobacter lari RM2100 GMP synthase YP_002575100.1 476724 D 306263 CDS YP_002575101.1 222823527 7411062 complement(478260..478811) 1 NC_012039.1 Pfam match to PF08242.3 Methyltransf_12; ribosomal RNA adenine dimethylase; phospholipid N-methyltransferase 478811 7411062 Cla_0502 Campylobacter lari RM2100 ribosomal RNA adenine dimethylase; phospholipid N-methyltransferase YP_002575101.1 478260 R 306263 CDS YP_002575102.1 222823528 7411063 478924..480363 1 NC_012039.1 hypothetical protein 480363 7411063 Cla_0503 Campylobacter lari RM2100 hypothetical protein YP_002575102.1 478924 D 306263 CDS YP_002575103.1 222823529 7411064 480625..481875 1 NC_012039.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 481875 purD 7411064 purD Campylobacter lari RM2100 phosphoribosylamine--glycine ligase YP_002575103.1 480625 D 306263 CDS YP_002575104.1 222823530 7411065 481872..482330 1 NC_012039.1 Pfam match to PF06271.3 RDD; RDD family 482330 7411065 Cla_0505 Campylobacter lari RM2100 RDD family YP_002575104.1 481872 D 306263 CDS YP_002575105.1 222823531 7411066 482323..484356 1 NC_012039.1 Pfam match to PF04453.5 OstA_C; organic solvent tolerance protein 484356 7411066 Cla_0506 Campylobacter lari RM2100 organic solvent tolerance protein YP_002575105.1 482323 D 306263 CDS YP_002575106.1 222823532 7411067 484356..485012 1 NC_012039.1 hypothetical protein 485012 7411067 Cla_0507 Campylobacter lari RM2100 hypothetical protein YP_002575106.1 484356 D 306263 CDS YP_002575107.1 222823533 7411068 485145..487253 1 NC_012039.1 Pfam matches to PF01138.12 RNase_PH, and to PF03725.6 RNase_PH_C; polynucleotide phosphorylase 487253 pnp 7411068 pnp Campylobacter lari RM2100 polynucleotide phosphorylase YP_002575107.1 485145 D 306263 CDS YP_002575108.1 222823534 7411082 495152..496414 1 NC_012039.1 helicase 496414 7411082 Cla_0522 Campylobacter lari RM2100 helicase YP_002575108.1 495152 D 306263 CDS YP_002575109.1 222823535 7411083 496417..497061 1 NC_012039.1 hypothetical protein 497061 7411083 Cla_0523 Campylobacter lari RM2100 hypothetical protein YP_002575109.1 496417 D 306263 CDS YP_002575110.1 222823536 7411084 complement(497062..497568) 1 NC_012039.1 participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein 497568 lolA 7411084 lolA Campylobacter lari RM2100 outer-membrane lipoprotein carrier protein YP_002575110.1 497062 R 306263 CDS YP_002575111.1 222823537 7411085 497686..500277 1 NC_012039.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 500277 secA 7411085 secA Campylobacter lari RM2100 preprotein translocase subunit SecA YP_002575111.1 497686 D 306263 CDS YP_002575112.1 222823538 7411086 500286..501575 1 NC_012039.1 Pfam matches to PF00072.15 Response_reg, and to PF00158.17 Sigma54_activat; Fis family transcriptional regulator 501575 7411086 Cla_0526 Campylobacter lari RM2100 Fis family transcriptional regulator YP_002575112.1 500286 D 306263 CDS YP_002575113.1 222823539 7411087 501589..502605 1 NC_012039.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 502605 asd 7411087 asd Campylobacter lari RM2100 aspartate-semialdehyde dehydrogenase YP_002575113.1 501589 D 306263 CDS YP_002575114.1 222823540 7411088 502617..503123 1 NC_012039.1 Pfam match to PF03350.7 UPF0114; hypothetical protein 503123 7411088 Cla_0528 Campylobacter lari RM2100 hypothetical protein YP_002575114.1 502617 D 306263 CDS YP_002575115.1 222823541 7411089 503136..504158 1 NC_012039.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 504158 hemE 7411089 hemE Campylobacter lari RM2100 uroporphyrinogen decarboxylase YP_002575115.1 503136 D 306263 CDS YP_002575116.1 222823542 7411090 504155..505063 1 NC_012039.1 Pfam match to PF04055.12 Radical_SAM; radical SAM domain protein 505063 7411090 Cla_0530 Campylobacter lari RM2100 radical SAM domain protein YP_002575116.1 504155 D 306263 CDS YP_002575117.1 222823543 7411092 complement(505293..507695) 1 NC_012039.1 Pfam matches to PF00515.19 TPR_1, and to PF00515.19 TPR_1; hypothetical protein 507695 7411092 Cla_0532 Campylobacter lari RM2100 hypothetical protein YP_002575117.1 505293 R 306263 CDS YP_002575118.1 222823544 7411093 complement(507704..508939) 1 NC_012039.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 508939 serS 7411093 serS Campylobacter lari RM2100 seryl-tRNA synthetase YP_002575118.1 507704 R 306263 CDS YP_002575119.1 222823545 7411094 complement(508951..509910) 1 NC_012039.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 509910 trpS 7411094 trpS Campylobacter lari RM2100 tryptophanyl-tRNA synthetase YP_002575119.1 508951 R 306263 CDS YP_002575120.1 222823546 7411095 complement(509907..510404) 1 NC_012039.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 510404 aroK 7411095 aroK Campylobacter lari RM2100 shikimate kinase YP_002575120.1 509907 R 306263 CDS YP_002575121.1 222823547 7411096 complement(510388..511773) 1 NC_012039.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 511773 engA 7411096 engA Campylobacter lari RM2100 GTP-binding protein EngA YP_002575121.1 510388 R 306263 CDS YP_002575122.1 222823548 7411097 511873..512805 1 NC_012039.1 Pfam match to PF00892.11 DUF6; hypothetical protein 512805 7411097 Cla_0537 Campylobacter lari RM2100 hypothetical protein YP_002575122.1 511873 D 306263 CDS YP_002575123.1 222823549 7411098 512795..514156 1 NC_012039.1 Pfam match to PF00860.11 Xan_ur_permease; purine/xanthine transport protein 514156 7411098 Cla_0538 Campylobacter lari RM2100 purine/xanthine transport protein YP_002575123.1 512795 D 306263 CDS YP_002575124.1 222823550 7411099 514174..514980 1 NC_012039.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 514980 kdsA 7411099 kdsA Campylobacter lari RM2100 2-dehydro-3-deoxyphosphooctonate aldolase YP_002575124.1 514174 D 306263 CDS YP_002575125.1 222823551 7411100 514993..515463 1 NC_012039.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 515463 ribH 7411100 ribH Campylobacter lari RM2100 6,7-dimethyl-8-ribityllumazine synthase YP_002575125.1 514993 D 306263 CDS YP_002575126.1 222823552 7411101 515465..515863 1 NC_012039.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 515863 nusB 7411101 nusB Campylobacter lari RM2100 transcription antitermination protein NusB YP_002575126.1 515465 D 306263 CDS YP_002575127.1 222823553 7411102 515860..516543 1 NC_012039.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 516543 pyrF 7411102 pyrF Campylobacter lari RM2100 orotidine 5'-phosphate decarboxylase YP_002575127.1 515860 D 306263 CDS YP_002575128.1 222823554 7411103 complement(516554..516967) 1 NC_012039.1 Pfam match to PF03724.7 META; hypothetical protein 516967 7411103 Cla_0543 Campylobacter lari RM2100 hypothetical protein YP_002575128.1 516554 R 306263 CDS YP_002575129.1 222823555 7411104 complement(516979..518571) 1 NC_012039.1 Pfam matches to PF00672.16 HAMP, and to PF00015.12 MCPsignal; MCP-domain signal transduction protein 518571 7411104 Cla_0544 Campylobacter lari RM2100 MCP-domain signal transduction protein YP_002575129.1 516979 R 306263 CDS YP_002575130.1 222823556 7411105 complement(518587..520119) 1 NC_012039.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 520119 purH 7411105 purH Campylobacter lari RM2100 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_002575130.1 518587 R 306263 CDS YP_002575131.1 222823557 7411106 complement(520116..520886) 1 NC_012039.1 Pfam match to PF00226.22 DnaJ; DnaJ-like protein 520886 7411106 Cla_0546 Campylobacter lari RM2100 DnaJ-like protein YP_002575131.1 520116 R 306263 CDS YP_002575132.1 222823558 7411107 complement(520889..523066) 1 NC_012039.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 523066 purL 7411107 purL Campylobacter lari RM2100 phosphoribosylformylglycinamidine synthase II YP_002575132.1 520889 R 306263 CDS YP_002575133.1 222823559 7411108 complement(523079..524407) 1 NC_012039.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 524407 trmE 7411108 trmE Campylobacter lari RM2100 tRNA modification GTPase TrmE YP_002575133.1 523079 R 306263 CDS YP_002575134.1 222823560 7411109 complement(524404..525243) 1 NC_012039.1 hypothetical protein 525243 7411109 Cla_0549 Campylobacter lari RM2100 hypothetical protein YP_002575134.1 524404 R 306263 CDS YP_002575135.1 222823561 7411110 complement(525227..526807) 1 NC_012039.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 526807 oxaA 7411110 oxaA Campylobacter lari RM2100 inner membrane protein translocase component YidC YP_002575135.1 525227 R 306263 CDS YP_002575136.1 222823562 7411111 complement(526771..527154) 1 NC_012039.1 Pfam match to PF01809.9 DUF37; hypothetical protein 527154 7411111 Cla_0551 Campylobacter lari RM2100 hypothetical protein YP_002575136.1 526771 R 306263 CDS YP_002575137.1 222823563 7411112 complement(527142..527387) 1 NC_012039.1 ribonuclease P protein component 527387 rnpA 7411112 rnpA Campylobacter lari RM2100 ribonuclease P protein component YP_002575137.1 527142 R 306263 CDS YP_002575138.1 222823564 7411113 complement(527465..527599) 1 NC_012039.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 527599 rpmH 7411113 rpmH Campylobacter lari RM2100 50S ribosomal protein L34 YP_002575138.1 527465 R 306263 CDS YP_002575139.1 222823565 7411114 527741..528211 1 NC_012039.1 Pfam match to PF00583.15 Acetyltransf_1; acetyltransferase (GNAT family) 528211 7411114 Cla_0554 Campylobacter lari RM2100 acetyltransferase (GNAT family) YP_002575139.1 527741 D 306263 CDS YP_002575140.1 222823566 7411115 528211..528822 1 NC_012039.1 hypothetical protein 528822 7411115 Cla_0555 Campylobacter lari RM2100 hypothetical protein YP_002575140.1 528211 D 306263 CDS YP_002575141.1 222823567 7411116 528819..530036 1 NC_012039.1 hypothetical protein 530036 7411116 Cla_0556 Campylobacter lari RM2100 hypothetical protein YP_002575141.1 528819 D 306263 CDS YP_002575142.1 222823568 7411117 complement(530014..530394) 1 NC_012039.1 Pfam match to PF03061.13 4HBT; 4-hydroxybenzoyl-CoA thioesterase 530394 7411117 Cla_0557 Campylobacter lari RM2100 4-hydroxybenzoyl-CoA thioesterase YP_002575142.1 530014 R 306263 CDS YP_002575143.1 222823569 7411118 complement(530448..534008) 1 NC_012039.1 type II restriction-modification enzyme 534008 7411118 Cla_0558 Campylobacter lari RM2100 type II restriction-modification enzyme YP_002575143.1 530448 R 306263 CDS YP_002575144.1 222823570 7411119 534126..534776 1 NC_012039.1 thiol:disulfide interchange protein, DsbA family 534776 7411119 Cla_0559 Campylobacter lari RM2100 thiol:disulfide interchange protein, DsbA family YP_002575144.1 534126 D 306263 CDS YP_002575145.1 222823571 7411120 534820..536670 1 NC_012039.1 Pfam match to PF05935.2 Arylsulfotrans; arylsulfate sulfotransferase 536670 astA 7411120 astA Campylobacter lari RM2100 arylsulfate sulfotransferase YP_002575145.1 534820 D 306263 CDS YP_002575146.1 222823572 7411121 complement(536700..538028) 1 NC_012039.1 pseudogene; Pfam match to PF03605.5 DcuA_DcuB; C4-dicarboxylate transporter, anaerobic 538028 7411121 Cla_0561 Campylobacter lari RM2100 C4-dicarboxylate transporter, anaerobic YP_002575146.1 536700 R 306263 CDS YP_002575147.1 222823573 7411122 complement(538226..539494) 1 NC_012039.1 aminoacyl-histidine dipeptidase 539494 pepD 7411122 pepD Campylobacter lari RM2100 aminoacyl-histidine dipeptidase YP_002575147.1 538226 R 306263 CDS YP_002575148.1 222823574 7411123 539548..540072 1 NC_012039.1 Pfam match to PF00565.8 SNase; thermonuclease (Snase-like) 540072 7411123 Cla_0563 Campylobacter lari RM2100 thermonuclease (Snase-like) YP_002575148.1 539548 D 306263 CDS YP_002575149.1 222823575 7411124 540081..540266 1 NC_012039.1 hypothetical protein 540266 7411124 Cla_0564 Campylobacter lari RM2100 hypothetical protein YP_002575149.1 540081 D 306263 CDS YP_002575150.1 222823576 7411125 complement(540246..540809) 1 NC_012039.1 hypothetical protein 540809 7411125 Cla_0565 Campylobacter lari RM2100 hypothetical protein YP_002575150.1 540246 R 306263 CDS YP_002575151.1 222823577 7411126 complement(540812..541687) 1 NC_012039.1 Pfam match to PF08003.2 Methyltransf_9; methyltransferase 541687 7411126 Cla_0566 Campylobacter lari RM2100 methyltransferase YP_002575151.1 540812 R 306263 CDS YP_002575152.1 222823578 7411127 complement(541726..542475) 1 NC_012039.1 Pfam match to PF00669.11 Flagellin_N; flagellin 542475 flaC 7411127 flaC Campylobacter lari RM2100 flagellin YP_002575152.1 541726 R 306263 CDS YP_002575153.1 222823579 7411128 complement(542496..542975) 1 NC_012039.1 hypothetical protein 542975 7411128 Cla_0568 Campylobacter lari RM2100 hypothetical protein YP_002575153.1 542496 R 306263 CDS YP_002575154.1 222823580 7411129 complement(543006..543809) 1 NC_012039.1 Pfam match to PF05175.5 MTS; modification methylase, HemK family 543809 7411129 Cla_0569 Campylobacter lari RM2100 modification methylase, HemK family YP_002575154.1 543006 R 306263 CDS YP_002575155.1 222823581 7411130 complement(543806..544993) 1 NC_012039.1 Pfam match to PF01435.9 Peptidase_M48; peptidase, M48 family 544993 7411130 Cla_0570 Campylobacter lari RM2100 peptidase, M48 family YP_002575155.1 543806 R 306263 CDS YP_002575156.1 222823582 7411131 complement(545049..546986) 1 NC_012039.1 Pfam matches to PF00005.18 ABC_tran, and to PF00005.18 ABC_tran; ABC transporter ATP-binding protein 546986 7411131 Cla_0571 Campylobacter lari RM2100 ABC transporter ATP-binding protein YP_002575156.1 545049 R 306263 CDS YP_002575157.1 222823583 7410638 547058..548188 1 NC_012039.1 Pfam match to PF00149.19 Metallophos; metallophosphoesterase 548188 7410638 Cla_0572 Campylobacter lari RM2100 metallophosphoesterase YP_002575157.1 547058 D 306263 CDS YP_002575158.1 222823584 7410639 548189..548998 1 NC_012039.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 548998 psd 7410639 psd Campylobacter lari RM2100 phosphatidylserine decarboxylase YP_002575158.1 548189 D 306263 CDS YP_002575159.1 222823585 7410640 complement(548973..549263) 1 NC_012039.1 flagellar biosynthesis protein 549263 7410640 Cla_0574 Campylobacter lari RM2100 flagellar biosynthesis protein YP_002575159.1 548973 R 306263 CDS YP_002575160.1 222823586 7410641 complement(549266..551275) 1 NC_012039.1 hypothetical protein 551275 7410641 Cla_0575 Campylobacter lari RM2100 hypothetical protein YP_002575160.1 549266 R 306263 CDS YP_002575161.1 222823587 7410642 complement(551265..552461) 1 NC_012039.1 Pfam match to PF07690.7 MFS_1; major facilitator superfamily transporter 552461 7410642 Cla_0576 Campylobacter lari RM2100 major facilitator superfamily transporter YP_002575161.1 551265 R 306263 CDS YP_002575162.1 222823588 7410643 complement(552455..552940) 1 NC_012039.1 hypothetical protein 552940 7410643 Cla_0577 Campylobacter lari RM2100 hypothetical protein YP_002575162.1 552455 R 306263 CDS YP_002575163.1 222823589 7410644 complement(552924..553202) 1 NC_012039.1 hypothetical protein 553202 7410644 Cla_0578 Campylobacter lari RM2100 hypothetical protein YP_002575163.1 552924 R 306263 CDS YP_002575164.1 222823590 7410645 complement(553199..554476) 1 NC_012039.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 554476 hemL 7410645 hemL Campylobacter lari RM2100 glutamate-1-semialdehyde aminotransferase YP_002575164.1 553199 R 306263 CDS YP_002575165.1 222823591 7410646 complement(554473..554817) 1 NC_012039.1 hypothetical protein 554817 7410646 Cla_0580 Campylobacter lari RM2100 hypothetical protein YP_002575165.1 554473 R 306263 CDS YP_002575166.1 222823592 7410647 554849..555745 1 NC_012039.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 555745 folD 7410647 folD Campylobacter lari RM2100 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_002575166.1 554849 D 306263 CDS YP_002575167.1 222823593 7410648 555742..556590 1 NC_012039.1 Pfam match to PF00717.14 Peptidase_S24; signal peptidase I 556590 lepP 7410648 lepP Campylobacter lari RM2100 signal peptidase I YP_002575167.1 555742 D 306263 CDS YP_002575168.1 222823594 7410649 556755..557921 1 NC_012039.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 557921 aspB 7410649 aspB Campylobacter lari RM2100 aspartate aminotransferase YP_002575168.1 556755 D 306263 CDS YP_002575169.1 222823595 7410650 558012..559133 1 NC_012039.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 559133 tgt 7410650 tgt Campylobacter lari RM2100 queuine tRNA-ribosyltransferase YP_002575169.1 558012 D 306263 CDS YP_002575170.1 222823596 7410651 559127..559885 1 NC_012039.1 hypothetical protein 559885 7410651 Cla_0585 Campylobacter lari RM2100 hypothetical protein YP_002575170.1 559127 D 306263 CDS YP_002575171.1 222823597 7410653 560084..561526 1 NC_012039.1 biotin carboxylase; catalyses the carboxylation of the carrier protein which then transfers the carboxyl group to form malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase subunit A 561526 pycA 7410653 pycA Campylobacter lari RM2100 acetyl-CoA carboxylase subunit A YP_002575171.1 560084 D 306263 CDS YP_002575172.1 222823598 7410654 561523..561783 1 NC_012039.1 hypothetical protein 561783 7410654 Cla_0588 Campylobacter lari RM2100 hypothetical protein YP_002575172.1 561523 D 306263 CDS YP_002575173.1 222823599 7410655 561783..562502 1 NC_012039.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 562502 7410655 Cla_0589 Campylobacter lari RM2100 arginyl-tRNA-protein transferase YP_002575173.1 561783 D 306263 CDS YP_002575174.1 222823600 7410656 562521..563327 1 NC_012039.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 563327 7410656 Cla_0590 Campylobacter lari RM2100 adenylosuccinate lyase YP_002575174.1 562521 D 306263 CDS YP_002575175.1 222823601 7410657 563398..564561 1 NC_012039.1 Pfam match to PF01098.10 FTSW_RODA_SPOVE; cell division protein, FtsW/RodA/SpoVE family 564561 ftsW 7410657 ftsW Campylobacter lari RM2100 cell division protein, FtsW/RodA/SpoVE family YP_002575175.1 563398 D 306263 CDS YP_002575176.1 222823602 7410658 564754..565512 1 NC_012039.1 Pfam match to PF00497.11 SBP_bac_3; amino acid ABC transporter, permease/substrate-binding lipoprotein 565512 cjaC 7410658 cjaC Campylobacter lari RM2100 amino acid ABC transporter, permease/substrate-binding lipoprotein YP_002575176.1 564754 D 306263 CDS YP_002575177.1 222823603 7410659 complement(565513..566778) 1 NC_012039.1 Pfam match to PF00266.10 Aminotran_5; NifS-like aminotransferase 566778 7410659 Cla_0593 Campylobacter lari RM2100 NifS-like aminotransferase YP_002575177.1 565513 R 306263 CDS YP_002575178.1 222823604 7410660 566835..567686 1 NC_012039.1 Pfam match to PF03008.5 DUF234; hypothetical protein 567686 7410660 Cla_0594 Campylobacter lari RM2100 hypothetical protein YP_002575178.1 566835 D 306263 CDS YP_002575179.1 222823605 7410661 567689..568705 1 NC_012039.1 Pfam matches to PF00512.16 HisKA, and to PF02518.17 HATPase_c; two-component sensor histidine kinase 568705 7410661 Cla_0595 Campylobacter lari RM2100 two-component sensor histidine kinase YP_002575179.1 567689 D 306263 CDS YP_002575180.1 222823606 7410663 568839..569306 1 NC_012039.1 Pfam match to PF00588.10 SpoU_methylase; rRNA methylase, SpoU family 569306 7410663 Cla_0597 Campylobacter lari RM2100 rRNA methylase, SpoU family YP_002575180.1 568839 D 306263 CDS YP_002575181.1 222823607 7410664 complement(569303..570031) 1 NC_012039.1 Pfam match to PF00005.18 ABC_tran; amino acid ABC transporter ATP-binding protein 570031 7410664 Cla_0598 Campylobacter lari RM2100 amino acid ABC transporter ATP-binding protein YP_002575181.1 569303 R 306263 CDS YP_002575182.1 222823608 7410665 complement(570024..570776) 1 NC_012039.1 Pfam match to PF00528.13 BPD_transp_1; amino acid ABC transporter permease 570776 7410665 Cla_0599 Campylobacter lari RM2100 amino acid ABC transporter permease YP_002575182.1 570024 R 306263 CDS YP_002575183.1 222823609 7410666 571000..572442 1 NC_012039.1 Pfam match to PF01235.8 Na_Ala_symp; sodium:alanine symporter family protein 572442 7410666 Cla_0600 Campylobacter lari RM2100 sodium:alanine symporter family protein YP_002575183.1 571000 D 306263 CDS YP_002575184.1 222823610 7410667 572616..574610 1 NC_012039.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 574610 glyS 7410667 glyS Campylobacter lari RM2100 glycyl-tRNA synthetase subunit beta YP_002575184.1 572616 D 306263 CDS YP_002575185.1 222823611 7410668 574607..575413 1 NC_012039.1 Pfam match to PF01551.13 Peptidase_M23; peptidase, M23/M37 family 575413 7410668 Cla_0602 Campylobacter lari RM2100 peptidase, M23/M37 family YP_002575185.1 574607 D 306263 CDS YP_002575186.1 222823612 7410669 575413..576366 1 NC_012039.1 Pfam match to PF02636.8 DUF185; hypothetical protein 576366 7410669 Cla_0603 Campylobacter lari RM2100 hypothetical protein YP_002575186.1 575413 D 306263 CDS YP_002575187.1 222823613 7410670 complement(576356..577378) 1 NC_012039.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 577378 ribB 7410670 ribB Campylobacter lari RM2100 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein YP_002575187.1 576356 R 306263 CDS YP_002575188.1 222823614 7410674 complement(578024..579133) 1 NC_012039.1 Pfam match to PF01098.10 FTSW_RODA_SPOVE; rod shape-determining protein 579133 rodA 7410674 rodA Campylobacter lari RM2100 rod shape-determining protein YP_002575188.1 578024 R 306263 CDS YP_002575189.1 222823615 7410675 579206..580168 1 NC_012039.1 Pfam matches to PF01479.16 S4, and to PF00849.13 PseudoU_synth_2; ribosomal large subunit pseudouridine synthase D 580168 rluD' 7410675 rluD' Campylobacter lari RM2100 ribosomal large subunit pseudouridine synthase D YP_002575189.1 579206 D 306263 CDS YP_002575190.1 222823616 7410676 580122..581336 1 NC_012039.1 Pfam matches to PF00041.12 fn3, and to PF00041.12 fn3; fibronectin type III 581336 7410676 Cla_0610 Campylobacter lari RM2100 fibronectin type III YP_002575190.1 580122 D 306263 CDS YP_002575191.1 222823617 7410677 581336..582526 1 NC_012039.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 582526 trmB 7410677 trmB Campylobacter lari RM2100 tRNA (guanine-N(7)-)-methyltransferase YP_002575191.1 581336 D 306263 CDS YP_002575192.1 222823618 7410678 582556..583215 1 NC_012039.1 Pfam match to PF00005.18 ABC_tran; cell division ATP-binding protein FtsE 583215 ftsE 7410678 ftsE Campylobacter lari RM2100 cell division ATP-binding protein FtsE YP_002575192.1 582556 D 306263 CDS YP_002575193.1 222823619 7410679 583202..584008 1 NC_012039.1 cell division protein FtsX 584008 ftsX 7410679 ftsX Campylobacter lari RM2100 cell division protein FtsX YP_002575193.1 583202 D 306263 CDS YP_002575194.1 222823620 7410680 584005..585180 1 NC_012039.1 Pfam match to PF01551.13 Peptidase_M23; peptidase, M23/M37 family 585180 7410680 Cla_0614 Campylobacter lari RM2100 peptidase, M23/M37 family YP_002575194.1 584005 D 306263 CDS YP_002575195.1 222823621 7410681 585236..585961 1 NC_012039.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 585961 pyrH 7410681 pyrH Campylobacter lari RM2100 uridylate kinase YP_002575195.1 585236 D 306263 CDS YP_002575196.1 222823622 7410682 585970..586188 1 NC_012039.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 586188 rpoZ 7410682 rpoZ Campylobacter lari RM2100 DNA-directed RNA polymerase subunit omega YP_002575196.1 585970 D 306263 CDS YP_002575197.1 222823623 7410683 586172..588361 1 NC_012039.1 Pfam matches to PF01966.13 HD, and to PF04607.8 RelA_SpoT; ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3' pyrophosphohydrolase 588361 spoT 7410683 spoT Campylobacter lari RM2100 ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3' pyrophosphohydrolase YP_002575197.1 586172 D 306263 CDS YP_002575198.1 222823624 7410684 588374..589576 1 NC_012039.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 589576 tyrS 7410684 tyrS Campylobacter lari RM2100 tyrosyl-tRNA synthetase YP_002575198.1 588374 D 306263 CDS YP_002575199.1 222823625 7410685 589573..590673 1 NC_012039.1 Pfam match to PF03060.6 NPD; oxidoreductase (2-nitropropane dioxygenase) 590673 7410685 Cla_0619 Campylobacter lari RM2100 oxidoreductase (2-nitropropane dioxygenase) YP_002575199.1 589573 D 306263 CDS YP_002575200.1 222823626 7410686 590666..592606 1 NC_012039.1 Pfam match to PF01520.9 Amidase_3; N-acetylmuramoyl-L-alanine amidase 592606 amiA 7410686 amiA Campylobacter lari RM2100 N-acetylmuramoyl-L-alanine amidase YP_002575200.1 590666 D 306263 CDS YP_002575201.1 222823627 7410687 592603..594441 1 NC_012039.1 catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase 594441 mnmC 7410687 mnmC Campylobacter lari RM2100 5-methylaminomethyl-2-thiouridine methyltransferase YP_002575201.1 592603 D 306263 CDS YP_002575202.1 222823628 7410688 594572..595402 1 NC_012039.1 hypothetical protein 595402 7410688 Cla_0622 Campylobacter lari RM2100 hypothetical protein YP_002575202.1 594572 D 306263 CDS YP_002575203.1 222823629 7410689 complement(595399..596505) 1 NC_012039.1 Pfam match to PF02163.13 Peptidase_M50; peptidase M50, membrane-associated zinc metallopeptidase 596505 7410689 Cla_0623 Campylobacter lari RM2100 peptidase M50, membrane-associated zinc metallopeptidase YP_002575203.1 595399 R 306263 CDS YP_002575204.1 222823630 7410690 complement(596502..597038) 1 NC_012039.1 Pfam match to PF01066.12 CDP-OH_P_transf; CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyltransferase 597038 pgsA 7410690 pgsA Campylobacter lari RM2100 CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyltransferase YP_002575204.1 596502 R 306263 CDS YP_002575205.1 222823631 7410691 complement(597090..597869) 1 NC_012039.1 Acts on the hydroxyl group at position 7 of the steroid frame; 7-alpha-hydroxysteroid dehydrogenase 597869 7410691 Cla_0625 Campylobacter lari RM2100 7-alpha-hydroxysteroid dehydrogenase YP_002575205.1 597090 R 306263 CDS YP_002575206.1 222823632 7410692 complement(597869..598765) 1 NC_012039.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 598765 dapA 7410692 dapA Campylobacter lari RM2100 dihydrodipicolinate synthase YP_002575206.1 597869 R 306263 CDS YP_002575207.1 222823633 7410693 complement(598755..600008) 1 NC_012039.1 Pfam matches to PF00675.11 Peptidase_M16, and to PF05193.12 Peptidase_M16_C; peptidase, M16 family 600008 7410693 Cla_0627 Campylobacter lari RM2100 peptidase, M16 family YP_002575207.1 598755 R 306263 CDS YP_002575208.1 222823634 7410694 complement(600005..601063) 1 NC_012039.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 601063 pyrD 7410694 pyrD Campylobacter lari RM2100 dihydroorotate dehydrogenase 2 YP_002575208.1 600005 R 306263 CDS YP_002575209.1 222823635 7410695 complement(601115..602878) 1 NC_012039.1 Pfam matches to PF00664.14 ABC_membrane, and to PF00005.18 ABC_tran; ABC transporter, ATP-binding protein/permease MsbA 602878 7410695 Cla_0629 Campylobacter lari RM2100 ABC transporter, ATP-binding protein/permease MsbA YP_002575209.1 601115 R 306263 CDS YP_002575210.1 222823636 7410696 complement(602871..604253) 1 NC_012039.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 604253 cysS 7410696 cysS Campylobacter lari RM2100 cysteinyl-tRNA synthetase YP_002575210.1 602871 R 306263 CDS YP_002575211.1 222823637 7410697 complement(604240..605706) 1 NC_012039.1 Pfam match to PF03023.5 MVIN; virulence factor protein MviN 605706 mviN 7410697 mviN Campylobacter lari RM2100 virulence factor protein MviN YP_002575211.1 604240 R 306263 CDS YP_002575212.1 222823638 7410698 605830..607686 1 NC_012039.1 hypothetical protein 607686 7410698 Cla_0632 Campylobacter lari RM2100 hypothetical protein YP_002575212.1 605830 D 306263 CDS YP_002575213.1 222823639 7410699 607683..608234 1 NC_012039.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 608234 ruvA 7410699 ruvA Campylobacter lari RM2100 Holliday junction DNA helicase RuvA YP_002575213.1 607683 D 306263 CDS YP_002575214.1 222823640 7410700 608251..609291 1 NC_012039.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 609291 ddl 7410700 ddl Campylobacter lari RM2100 D-alanyl-alanine synthetase A YP_002575214.1 608251 D 306263 CDS YP_002575215.1 222823641 7410701 609294..609509 1 NC_012039.1 hypothetical protein 609509 7410701 Cla_0635 Campylobacter lari RM2100 hypothetical protein YP_002575215.1 609294 D 306263 CDS YP_002575216.1 222823642 7410702 609512..610255 1 NC_012039.1 Pfam match to PF00561.11 Abhydrolase_1; alpha/beta hydrolase 610255 7410702 Cla_0636 Campylobacter lari RM2100 alpha/beta hydrolase YP_002575216.1 609512 D 306263 CDS YP_002575217.1 222823643 7410703 610248..611648 1 NC_012039.1 Pfam match to PF08245.3 Mur_ligase_M; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 611648 murF 7410703 murF Campylobacter lari RM2100 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_002575217.1 610248 D 306263 CDS YP_002575218.1 222823644 7410704 complement(611660..612361) 1 NC_012039.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 612361 flgH 7410704 flgH Campylobacter lari RM2100 flagellar basal body L-ring protein YP_002575218.1 611660 R 306263 CDS YP_002575219.1 222823645 7410705 612447..613916 1 NC_012039.1 Pfam match to PF01515.10 PTA_PTB; phosphate acetyltransferase 613916 pta 7410705 pta Campylobacter lari RM2100 phosphate acetyltransferase YP_002575219.1 612447 D 306263 CDS YP_002575220.1 222823646 7410706 613925..615109 1 NC_012039.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 615109 ackA 7410706 ackA Campylobacter lari RM2100 acetate kinase YP_002575220.1 613925 D 306263 CDS YP_002575221.1 222823647 7410707 complement(615138..615908) 1 NC_012039.1 Pfam match to PF03180.5 Lipoprotein_9; hypothetical protein 615908 7410707 Cla_0641 Campylobacter lari RM2100 hypothetical protein YP_002575221.1 615138 R 306263 CDS YP_002575222.1 222823648 7410708 complement(615977..617182) 1 NC_012039.1 Pfam match to PF01501.11 Glyco_transf_8; glycosyltransferase 617182 7410708 Cla_0642 Campylobacter lari RM2100 glycosyltransferase YP_002575222.1 615977 R 306263 CDS YP_002575223.1 222823649 7410709 complement(617186..617851) 1 NC_012039.1 Pfam match to PF00528.13 BPD_transp_1; ABC transporter permease 617851 7410709 Cla_0643 Campylobacter lari RM2100 ABC transporter permease YP_002575223.1 617186 R 306263 CDS YP_002575224.1 222823650 7410710 complement(617851..618807) 1 NC_012039.1 Pfam matches to PF00005.18 ABC_tran, and to PF09383.1 NIL; ABC transporter ATP-binding protein 618807 7410710 Cla_0644 Campylobacter lari RM2100 ABC transporter ATP-binding protein YP_002575224.1 617851 R 306263 CDS YP_002575225.1 222823651 7410711 complement(618811..621423) 1 NC_012039.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 621423 valS 7410711 valS Campylobacter lari RM2100 valyl-tRNA synthetase YP_002575225.1 618811 R 306263 CDS YP_002575226.1 222823652 7410712 complement(621498..622550) 1 NC_012039.1 Pfam match to PF00691.11 OmpA; hypothetical protein 622550 7410712 Cla_0646 Campylobacter lari RM2100 hypothetical protein YP_002575226.1 621498 R 306263 CDS YP_002575227.1 222823653 7410713 complement(622573..623091) 1 NC_012039.1 Pfam match to PF00719.10 Pyrophosphatase; inorganic pyrophosphatase 623091 ppa 7410713 ppa Campylobacter lari RM2100 inorganic pyrophosphatase YP_002575227.1 622573 R 306263 CDS YP_002575228.1 222823654 7410714 complement(623102..623674) 1 NC_012039.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 623674 adk 7410714 adk Campylobacter lari RM2100 adenylate kinase YP_002575228.1 623102 R 306263 CDS YP_002575229.1 222823655 7410715 complement(623671..625422) 1 NC_012039.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 625422 aspS 7410715 aspS Campylobacter lari RM2100 aspartyl-tRNA synthetase YP_002575229.1 623671 R 306263 CDS YP_002575230.1 222823656 7410716 625508..626338 1 NC_012039.1 Pfam match to PF01513.12 NAD_kinase; inorganic polyphosphate/ATP-NAD kinase 626338 7410716 Cla_0650 Campylobacter lari RM2100 inorganic polyphosphate/ATP-NAD kinase YP_002575230.1 625508 D 306263 CDS YP_002575231.1 222823657 7410717 626338..627852 1 NC_012039.1 Pfam match to PF02463.10 SMC_N; DNA repair protein RecN 627852 recN 7410717 recN Campylobacter lari RM2100 DNA repair protein RecN YP_002575231.1 626338 D 306263 CDS YP_002575232.1 222823658 7410718 627914..629158 1 NC_012039.1 Pfam matches to PF00072.15 Response_reg, and to PF00990.12 GGDEF; two component response regulator 629158 7410718 Cla_0652 Campylobacter lari RM2100 two component response regulator YP_002575232.1 627914 D 306263 CDS YP_002575233.1 222823659 7409987 629149..629946 1 NC_012039.1 Pfam match to PF01026.12 TatD_DNase; TatD-related deoxyribonuclease 629946 7409987 Cla_0653 Campylobacter lari RM2100 TatD-related deoxyribonuclease YP_002575233.1 629149 D 306263 CDS YP_002575234.1 222823660 7409988 629946..631097 1 NC_012039.1 Pfam matches to PF01464.11 SLT, and to PF01476.11 LysM; peptidoglycan-binding LysM:Lytic transglycosylase, catalytic (SLT family) 631097 7409988 Cla_0654 Campylobacter lari RM2100 peptidoglycan-binding LysM:Lytic transglycosylase, catalytic (SLT family) YP_002575234.1 629946 D 306263 CDS YP_002575235.1 222823661 7409989 631033..631872 1 NC_012039.1 Pfam matches to PF03330.9 DPBB_1, and to PF05036.4 SPOR; rare lipoprotein A 631872 rlpA 7409989 rlpA Campylobacter lari RM2100 rare lipoprotein A YP_002575235.1 631033 D 306263 CDS YP_002575236.1 222823662 7409990 631877..632365 1 NC_012039.1 YrbI family phosphatase 632365 7409990 Cla_0656 Campylobacter lari RM2100 YrbI family phosphatase YP_002575236.1 631877 D 306263 CDS YP_002575237.1 222823663 7409991 632356..632862 1 NC_012039.1 hypothetical protein 632862 7409991 Cla_0657 Campylobacter lari RM2100 hypothetical protein YP_002575237.1 632356 D 306263 CDS YP_002575238.1 222823664 7409992 632844..633302 1 NC_012039.1 Pfam match to PF03968.5 OstA; OstA family protein 633302 7409992 Cla_0658 Campylobacter lari RM2100 OstA family protein YP_002575238.1 632844 D 306263 CDS YP_002575239.1 222823665 7409993 633299..633898 1 NC_012039.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 633898 engB 7409993 engB Campylobacter lari RM2100 ribosome biogenesis GTP-binding protein YsxC YP_002575239.1 633299 D 306263 CDS YP_002575240.1 222823666 7409994 633888..634379 1 NC_012039.1 hypothetical protein 634379 7409994 Cla_0660 Campylobacter lari RM2100 hypothetical protein YP_002575240.1 633888 D 306263 CDS YP_002575241.1 222823667 7409995 634381..636207 1 NC_012039.1 Pfam matches to PF03717.6 PBP_dimer, and to PF00905.13 Transpeptidase; penicillin-binding protein 2 636207 pbpC 7409995 pbpC Campylobacter lari RM2100 penicillin-binding protein 2 YP_002575241.1 634381 D 306263 CDS YP_002575242.1 222823668 7409996 complement(636200..637228) 1 NC_012039.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 637228 queA 7409996 queA Campylobacter lari RM2100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_002575242.1 636200 R 306263 CDS YP_002575243.1 222823669 7409997 complement(637212..637955) 1 NC_012039.1 Pfam match to PF00902.9 TatC; Sec-independent protein secretion pathway component TatC 637955 tatC 7409997 tatC Campylobacter lari RM2100 Sec-independent protein secretion pathway component TatC YP_002575243.1 637212 R 306263 CDS YP_002575244.1 222823670 7409998 complement(637958..638350) 1 NC_012039.1 mediates the export of protein precursors bearing twin-arginine signal peptides; sec-independent translocase 638350 7409998 Cla_0664 Campylobacter lari RM2100 sec-independent translocase YP_002575244.1 637958 R 306263 CDS YP_002575245.1 222823671 7409999 638502..639476 1 NC_012039.1 Pfam match to PF03773.4 DUF318; hypothetical protein 639476 7409999 Cla_0665 Campylobacter lari RM2100 hypothetical protein YP_002575245.1 638502 D 306263 CDS YP_002575246.1 222823672 7410000 639485..639802 1 NC_012039.1 Pfam match to PF01022.11 HTH_5; ArsR family transcriptional regulator 639802 7410000 Cla_0666 Campylobacter lari RM2100 ArsR family transcriptional regulator YP_002575246.1 639485 D 306263 CDS YP_002575247.1 222823673 7410001 complement(639799..640848) 1 NC_012039.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 640848 7410001 Cla_0667 Campylobacter lari RM2100 coproporphyrinogen III oxidase YP_002575247.1 639799 R 306263 CDS YP_002575248.1 222823674 7410002 640929..641399 1 NC_012039.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 641399 7410002 Cla_0668 Campylobacter lari RM2100 dinucleoside polyphosphate hydrolase YP_002575248.1 640929 D 306263 CDS YP_002575249.1 222823675 7410003 641399..642601 1 NC_012039.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 642601 lysC 7410003 lysC Campylobacter lari RM2100 aspartate kinase YP_002575249.1 641399 D 306263 CDS YP_002575250.1 222823676 7410004 642602..643138 1 NC_012039.1 hypothetical protein 643138 7410004 Cla_0670 Campylobacter lari RM2100 hypothetical protein YP_002575250.1 642602 D 306263 CDS YP_002575251.1 222823677 7410005 643135..643791 1 NC_012039.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 643791 7410005 Cla_0671 Campylobacter lari RM2100 DNA polymerase III subunit delta' YP_002575251.1 643135 D 306263 CDS YP_002575252.1 222823678 7410006 643778..644920 1 NC_012039.1 Pfam match to PF00809.13 Pterin_bind; dihydropteroate synthase 644920 folP 7410006 folP Campylobacter lari RM2100 dihydropteroate synthase YP_002575252.1 643778 D 306263 CDS YP_002575253.1 222823679 7410007 644923..646878 1 NC_012039.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 646878 ligA 7410007 ligA Campylobacter lari RM2100 NAD-dependent DNA ligase LigA YP_002575253.1 644923 D 306263 CDS YP_002575254.1 222823680 7410008 646868..647590 1 NC_012039.1 Pfam match to PF01728.10 FtsJ; ribosomal RNA large subunit methyltransferase, FtsJ family 647590 tlyA 7410008 tlyA Campylobacter lari RM2100 ribosomal RNA large subunit methyltransferase, FtsJ family YP_002575254.1 646868 D 306263 CDS YP_002575255.1 222823681 7410009 647556..648398 1 NC_012039.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 648398 ribF 7410009 ribF Campylobacter lari RM2100 bifunctional riboflavin kinase/FMN adenylyltransferase YP_002575255.1 647556 D 306263 CDS YP_002575256.1 222823682 7410010 648398..649102 1 NC_012039.1 Pfam match to PF08242.3 Methyltransf_12; methylase 649102 7410010 Cla_0676 Campylobacter lari RM2100 methylase YP_002575256.1 648398 D 306263 CDS YP_002575257.1 222823683 7410011 complement(649132..650232) 1 NC_012039.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 650232 7410011 Cla_0677 Campylobacter lari RM2100 GTP-dependent nucleic acid-binding protein EngD YP_002575257.1 649132 R 306263 CDS YP_002575258.1 222823684 7410012 complement(650229..651680) 1 NC_012039.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 651680 pepA 7410012 pepA Campylobacter lari RM2100 leucyl aminopeptidase YP_002575258.1 650229 R 306263 CDS YP_002575259.1 222823685 7410013 complement(651677..652270) 1 NC_012039.1 hypothetical protein 652270 7410013 Cla_0679 Campylobacter lari RM2100 hypothetical protein YP_002575259.1 651677 R 306263 CDS YP_002575260.1 222823686 7410014 complement(652273..652812) 1 NC_012039.1 Pfam match to PF00156.18 Pribosyltran; adenine phosphoribosyltransferase 652812 apt 7410014 apt Campylobacter lari RM2100 adenine phosphoribosyltransferase YP_002575260.1 652273 R 306263 CDS YP_002575261.1 222823687 7410015 complement(652809..653141) 1 NC_012039.1 hypothetical protein 653141 7410015 Cla_0681 Campylobacter lari RM2100 hypothetical protein YP_002575261.1 652809 R 306263 CDS YP_002575262.1 222823688 7410016 complement(653138..653575) 1 NC_012039.1 Pfam match to PF02502.9 LacAB_rpiB; ribose 5-phosphate isomerase B 653575 rpiB 7410016 rpiB Campylobacter lari RM2100 ribose 5-phosphate isomerase B YP_002575262.1 653138 R 306263 CDS YP_002575263.1 222823689 7410017 653716..654267 1 NC_012039.1 Pfam match to PF01339.8 CheB_methylest; protein-glutamate methylesterase 654267 cheB 7410017 cheB Campylobacter lari RM2100 protein-glutamate methylesterase YP_002575263.1 653716 D 306263 CDS YP_002575264.1 222823690 7410018 654277..655059 1 NC_012039.1 Pfam match to PF01739.9 CheR; chemotaxis protein methyltransferase 655059 cheR 7410018 cheR Campylobacter lari RM2100 chemotaxis protein methyltransferase YP_002575264.1 654277 D 306263 CDS YP_002575265.1 222823691 7410019 complement(655056..656249) 1 NC_012039.1 Pfam match to PF07690.7 MFS_1; hypothetical protein 656249 7410019 Cla_0685 Campylobacter lari RM2100 hypothetical protein YP_002575265.1 655056 R 306263 CDS YP_002575266.1 222823692 7410020 656356..657402 1 NC_012039.1 Pfam match to PF04055.12 Radical_SAM; hypothetical protein 657402 7410020 Cla_0686 Campylobacter lari RM2100 hypothetical protein YP_002575266.1 656356 D 306263 CDS YP_002575267.1 222823693 7410021 657402..658622 1 NC_012039.1 Pfam match to PF05193.12 Peptidase_M16_C; peptidase, M16 family 658622 7410021 Cla_0687 Campylobacter lari RM2100 peptidase, M16 family YP_002575267.1 657402 D 306263 CDS YP_002575268.1 222823694 7410022 658612..660435 1 NC_012039.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 660435 recG 7410022 recG Campylobacter lari RM2100 ATP-dependent DNA helicase RecG YP_002575268.1 658612 D 306263 CDS YP_002575269.1 222823695 7410023 660428..661030 1 NC_012039.1 Pfam match to PF00027.20 cNMP_binding; transcriptional regulator 661030 7410023 Cla_0689 Campylobacter lari RM2100 transcriptional regulator YP_002575269.1 660428 D 306263 CDS YP_002575270.1 222823696 7410024 661074..661721 1 NC_012039.1 Pfam match to PF00528.13 BPD_transp_1; ABC transporter, His/Glu/Gln/Arg/opine family (permease) 661721 7410024 Cla_0690 Campylobacter lari RM2100 ABC transporter, His/Glu/Gln/Arg/opine family (permease) YP_002575270.1 661074 D 306263 CDS YP_002575271.1 222823697 7410025 661714..662373 1 NC_012039.1 Pfam match to PF00528.13 BPD_transp_1; ABC transporter, His/Glu/Gln/Arg/opine family (permease) 662373 7410025 Cla_0691 Campylobacter lari RM2100 ABC transporter, His/Glu/Gln/Arg/opine family (permease) YP_002575271.1 661714 D 306263 CDS YP_002575272.1 222823698 7410026 662375..663112 1 NC_012039.1 Pfam match to PF00005.18 ABC_tran; ABC transporter, His/Glu/Gln/Arg/opine family (ATP-binding protein) 663112 7410026 Cla_0692 Campylobacter lari RM2100 ABC transporter, His/Glu/Gln/Arg/opine family (ATP-binding protein) YP_002575272.1 662375 D 306263 CDS YP_002575273.1 222823699 7410027 663189..664016 1 NC_012039.1 Pfam match to PF00497.11 SBP_bac_3; amino acid ABC transporter substrate-binding protein 664016 cjaA 7410027 cjaA Campylobacter lari RM2100 amino acid ABC transporter substrate-binding protein YP_002575273.1 663189 D 306263 CDS YP_002575274.1 222823700 7410028 664019..665242 1 NC_012039.1 Pfam match to PF07690.7 MFS_1; major facilitator family transporter CjaB 665242 cjaB 7410028 cjaB Campylobacter lari RM2100 major facilitator family transporter CjaB YP_002575274.1 664019 D 306263 CDS YP_002575275.1 222823701 7410029 665309..666715 1 NC_012039.1 Pfam match to PF02080.12 TrkA_C; TrkA domain protein 666715 7410029 Cla_0695 Campylobacter lari RM2100 TrkA domain protein YP_002575275.1 665309 D 306263 CDS YP_002575276.1 222823702 7410030 666723..667781 1 NC_012039.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 667781 aroB 7410030 aroB Campylobacter lari RM2100 3-dehydroquinate synthase YP_002575276.1 666723 D 306263 CDS YP_002575277.1 222823703 7410031 667778..669307 1 NC_012039.1 Pfam match to PF00924.9 MS_channel; mechanosensitive ion channel MscS 669307 7410031 Cla_0697 Campylobacter lari RM2100 mechanosensitive ion channel MscS YP_002575277.1 667778 D 306263 CDS YP_002575278.1 222823704 7410032 669304..670560 1 NC_012039.1 Pfam matches to PF00919.11 UPF0004, and to PF04055.12 Radical_SAM; MiaB-like tRNA modifying enzyme 670560 7410032 Cla_0698 Campylobacter lari RM2100 MiaB-like tRNA modifying enzyme YP_002575278.1 669304 D 306263 CDS YP_002575279.1 222823705 7410033 670550..672148 1 NC_012039.1 Pfam match to PF00004.20 AAA; cell division protein FtsH 672148 ftsH1 7410033 ftsH1 Campylobacter lari RM2100 cell division protein FtsH YP_002575279.1 670550 D 306263 CDS YP_002575280.1 222823706 7410034 672151..672678 1 NC_012039.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 672678 mogA 7410034 mogA Campylobacter lari RM2100 molybdenum cofactor biosynthesis protein MogA YP_002575280.1 672151 D 306263 CDS YP_002575281.1 222823707 7410035 complement(672692..673066) 1 NC_012039.1 Pfam match to PF00581.11 Rhodanese; rhodanese domain protein 673066 7410035 Cla_0701 Campylobacter lari RM2100 rhodanese domain protein YP_002575281.1 672692 R 306263 CDS YP_002575282.1 222823708 7410036 complement(673069..673404) 1 NC_012039.1 hypothetical protein 673404 7410036 Cla_0702 Campylobacter lari RM2100 hypothetical protein YP_002575282.1 673069 R 306263 CDS YP_002575283.1 222823709 7410037 complement(673401..675230) 1 NC_012039.1 molecular chaperone; heat shock protein 90 675230 htpG 7410037 htpG Campylobacter lari RM2100 heat shock protein 90 YP_002575283.1 673401 R 306263 CDS YP_002575284.1 222823710 7410038 complement(675241..675609) 1 NC_012039.1 Pfam match to PF02537.6 CRCB; camphor resistance protein CrcB 675609 7410038 Cla_0704 Campylobacter lari RM2100 camphor resistance protein CrcB YP_002575284.1 675241 R 306263 CDS YP_002575285.1 222823711 7410039 complement(675606..676295) 1 NC_012039.1 Pfam match to PF01553.12 Acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 676295 plsC 7410039 plsC Campylobacter lari RM2100 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_002575285.1 675606 R 306263 CDS YP_002575286.1 222823712 7410040 complement(676273..677478) 1 NC_012039.1 hypothetical protein 677478 7410040 Cla_0706 Campylobacter lari RM2100 hypothetical protein YP_002575286.1 676273 R 306263 CDS YP_002575287.1 222823713 7410041 complement(677472..678122) 1 NC_012039.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 678122 purQ 7410041 purQ Campylobacter lari RM2100 phosphoribosylformylglycinamidine synthase I YP_002575287.1 677472 R 306263 CDS YP_002575288.1 222823714 7410042 complement(678119..678355) 1 NC_012039.1 Pfam match to PF02700.5 PurS; phosphoribosylformylglycinamidine synthase, PurS subunit 678355 purS 7410042 purS Campylobacter lari RM2100 phosphoribosylformylglycinamidine synthase, PurS subunit YP_002575288.1 678119 R 306263 CDS YP_002575289.1 222823715 7410043 complement(678364..679077) 1 NC_012039.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 679077 purC 7410043 purC Campylobacter lari RM2100 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_002575289.1 678364 R 306263 CDS YP_002575290.1 222823716 7410044 complement(679079..680395) 1 NC_012039.1 Pfam matches to PF00595.15 PDZ, and to PF03572.9 Peptidase_S41; peptidase, S41 family 680395 7410044 Cla_0710 Campylobacter lari RM2100 peptidase, S41 family YP_002575290.1 679079 R 306263 CDS YP_002575291.1 222823717 7410045 680603..683176 1 NC_012039.1 Pfam matches to PF02861.11 Clp_N, and to PF00004.20 AAA; protein disaggregating chaperone ClpB 683176 clpB 7410045 clpB Campylobacter lari RM2100 protein disaggregating chaperone ClpB YP_002575291.1 680603 D 306263 CDS YP_002575292.1 222823718 7410046 683336..684475 1 NC_012039.1 Pfam matches to PF08425.1 NiFe_dehyd_N, and to PF01058.13 Oxidored_q6; Ni/Fe-hydrogenase, small subunit 684475 hyaA 7410046 hyaA Campylobacter lari RM2100 Ni/Fe-hydrogenase, small subunit YP_002575292.1 683336 D 306263 CDS YP_002575293.1 222823719 7410047 684478..686193 1 NC_012039.1 Pfam match to PF00374.10 NiFeSe_Hases; Ni/Fe-hydrogenase, large subunit 686193 hyaB 7410047 hyaB Campylobacter lari RM2100 Ni/Fe-hydrogenase, large subunit YP_002575293.1 684478 D 306263 CDS YP_002575294.1 222823720 7410048 686209..686901 1 NC_012039.1 Pfam match to PF01292.11 Ni_hydr_CYTB; Ni/Fe hydrogenase, cytochrome b subunit 686901 hyaC 7410048 hyaC Campylobacter lari RM2100 Ni/Fe hydrogenase, cytochrome b subunit YP_002575294.1 686209 D 306263 CDS YP_002575295.1 222823721 7410049 686898..687431 1 NC_012039.1 Pfam match to PF01750.9 HycI; Ni/Fe hydrogenase, expression/formation protein 687431 hyaD 7410049 hyaD Campylobacter lari RM2100 Ni/Fe hydrogenase, expression/formation protein YP_002575295.1 686898 D 306263 CDS YP_002575296.1 222823722 7410050 complement(687453..687875) 1 NC_012039.1 hypothetical protein 687875 7410050 Cla_0716 Campylobacter lari RM2100 hypothetical protein YP_002575296.1 687453 R 306263 CDS YP_002575297.1 222823723 7410051 688009..689304 1 NC_012039.1 charges one glutamine molecule and pairs it with tRNA(Gln); glutamylglutaminyl-tRNA synthetase 689304 gltX1 7410051 gltX1 Campylobacter lari RM2100 glutamylglutaminyl-tRNA synthetase YP_002575297.1 688009 D 306263 CDS YP_002575298.1 222823724 7410052 689306..689593 1 NC_012039.1 Pfam match to PF02325.8 YGGT; hypothetical protein 689593 7410052 Cla_0718 Campylobacter lari RM2100 hypothetical protein YP_002575298.1 689306 D 306263 CDS YP_002575299.1 222823725 7410053 689594..691231 1 NC_012039.1 Pfam match to PF01464.11 SLT; soluble lytic murein transglycosylase, SLT family 691231 7410053 Cla_0719 Campylobacter lari RM2100 soluble lytic murein transglycosylase, SLT family YP_002575299.1 689594 D 306263 CDS YP_002575300.1 222823726 7410054 complement(691119..691613) 1 NC_012039.1 hypothetical protein 691613 7410054 Cla_0720 Campylobacter lari RM2100 hypothetical protein YP_002575300.1 691119 R 306263 CDS YP_002575301.1 222823727 7410055 691700..692179 1 NC_012039.1 Pfam match to PF03205.5 MobB; molybdopterin-guanine dinucleotide biosynthesis protein B 692179 mobB 7410055 mobB Campylobacter lari RM2100 molybdopterin-guanine dinucleotide biosynthesis protein B YP_002575301.1 691700 D 306263 CDS YP_002575302.1 222823728 7410056 692189..693037 1 NC_012039.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 693037 fbp 7410056 fbp Campylobacter lari RM2100 fructose-1,6-bisphosphatase YP_002575302.1 692189 D 306263 CDS YP_002575303.1 222823729 7410057 693037..693231 1 NC_012039.1 hypothetical protein 693231 7410057 Cla_0723 Campylobacter lari RM2100 hypothetical protein YP_002575303.1 693037 D 306263 CDS YP_002575304.1 222823730 7410058 693246..695135 1 NC_012039.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 695135 metS 7410058 metS Campylobacter lari RM2100 methionyl-tRNA synthetase YP_002575304.1 693246 D 306263 CDS YP_002575305.1 222823731 7410059 695136..696077 1 NC_012039.1 hypothetical protein 696077 7410059 Cla_0725 Campylobacter lari RM2100 hypothetical protein YP_002575305.1 695136 D 306263 CDS YP_002575306.1 222823732 7410060 696140..696883 1 NC_012039.1 hypothetical protein 696883 peb2 7410060 peb2 Campylobacter lari RM2100 hypothetical protein YP_002575306.1 696140 D 306263 CDS YP_002575307.1 222823733 7410061 complement(696927..697499) 1 NC_012039.1 Pfam match to PF04264.4 YceI; hypothetical protein 697499 7410061 Cla_0727 Campylobacter lari RM2100 hypothetical protein YP_002575307.1 696927 R 306263 CDS YP_002575308.1 222823734 7410062 complement(697563..698228) 1 NC_012039.1 Pfam match to PF06508.4 ExsB; exoenzyme S synthesis protein B 698228 7410062 Cla_0728 Campylobacter lari RM2100 exoenzyme S synthesis protein B YP_002575308.1 697563 R 306263 CDS YP_002575309.1 222823735 7410063 698281..698694 1 NC_012039.1 Pfam match to PF02130.8 UPF0054; hypothetical protein 698694 7410063 Cla_0729 Campylobacter lari RM2100 hypothetical protein YP_002575309.1 698281 D 306263 CDS YP_002575310.1 222823736 7410064 698695..699663 1 NC_012039.1 hypothetical protein 699663 7410064 Cla_0730 Campylobacter lari RM2100 hypothetical protein YP_002575310.1 698695 D 306263 CDS YP_002575311.1 222823737 7410065 complement(699668..700078) 1 NC_012039.1 periplasmic protein 700078 7410065 Cla_0731 Campylobacter lari RM2100 periplasmic protein YP_002575311.1 699668 R 306263 CDS YP_002575312.1 222823738 7410066 700193..700723 1 NC_012039.1 Pfam match to PF01694.13 Rhomboid; hypothetical protein 700723 7410066 Cla_0732 Campylobacter lari RM2100 hypothetical protein YP_002575312.1 700193 D 306263 CDS YP_002575313.1 222823739 7410067 700720..701211 1 NC_012039.1 Pfam match to PF00300.13 PGAM; phosphohistidine phosphatase SixA 701211 7410067 Cla_0733 Campylobacter lari RM2100 phosphohistidine phosphatase SixA YP_002575313.1 700720 D 306263 CDS YP_002575314.1 222823740 7410068 701930..702613 1 NC_012039.1 Pfam match to PF01177.13 Asp_Glu_race; aspartate racemase 702613 7410068 Cla_0734 Campylobacter lari RM2100 aspartate racemase YP_002575314.1 701930 D 306263 CDS YP_002575315.1 222823741 7410069 702613..703680 1 NC_012039.1 Pfam match to PF00589.13 Phage_integrase; integrase/recombinase 703680 xerD 7410069 xerD Campylobacter lari RM2100 integrase/recombinase YP_002575315.1 702613 D 306263 CDS YP_002575316.1 222823742 7410070 703738..704994 1 NC_012039.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 704994 murA 7410070 murA Campylobacter lari RM2100 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_002575316.1 703738 D 306263 CDS YP_002575317.1 222823743 7410071 704991..706151 1 NC_012039.1 Pfam matches to PF03453.8 MoeA_N, and to PF00994.15 MoCF_biosynth; molybdopterin biosynthesis protein 706151 moeA2 7410071 moeA2 Campylobacter lari RM2100 molybdopterin biosynthesis protein YP_002575317.1 704991 D 306263 CDS YP_002575318.1 222823744 7410072 complement(706182..706478) 1 NC_012039.1 hypothetical protein 706478 7410072 Cla_0738 Campylobacter lari RM2100 hypothetical protein YP_002575318.1 706182 R 306263 CDS YP_002575319.1 222823745 7410074 complement(706668..707939) 1 NC_012039.1 hypothetical protein 707939 7410074 Cla_0740 Campylobacter lari RM2100 hypothetical protein YP_002575319.1 706668 R 306263 CDS YP_002575320.1 222823746 7410075 708068..708754 1 NC_012039.1 required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 708754 flgA 7410075 flgA Campylobacter lari RM2100 flagellar basal body P-ring biosynthesis protein FlgA YP_002575320.1 708068 D 306263 CDS YP_002575321.1 222823747 7410076 708751..709332 1 NC_012039.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 709332 ubiX 7410076 ubiX Campylobacter lari RM2100 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_002575321.1 708751 D 306263 CDS YP_002575322.1 222823748 7410077 709336..709815 1 NC_012039.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 709815 coaD 7410077 coaD Campylobacter lari RM2100 phosphopantetheine adenylyltransferase YP_002575322.1 709336 D 306263 CDS YP_002575323.1 222823749 7410078 709806..710390 1 NC_012039.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 710390 tmk 7410078 tmk Campylobacter lari RM2100 thymidylate kinase YP_002575323.1 709806 D 306263 CDS YP_002575324.1 222823750 7410079 710383..711609 1 NC_012039.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 711609 hisS 7410079 hisS Campylobacter lari RM2100 histidyl-tRNA synthetase YP_002575324.1 710383 D 306263 CDS YP_002575325.1 222823751 7410080 711606..713435 1 NC_012039.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 713435 speA 7410080 speA Campylobacter lari RM2100 arginine decarboxylase YP_002575325.1 711606 D 306263 CDS YP_002575326.1 222823752 7410081 713432..714037 1 NC_012039.1 serine O-acetyltransferase 714037 cysE 7410081 cysE Campylobacter lari RM2100 serine O-acetyltransferase YP_002575326.1 713432 D 306263 CDS YP_002575327.1 222823753 7410082 714034..715065 1 NC_012039.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase 715065 murG 7410082 murG Campylobacter lari RM2100 UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase YP_002575327.1 714034 D 306263 CDS YP_002575328.1 222823754 7410083 complement(715058..715675) 1 NC_012039.1 hypothetical protein 715675 7410083 Cla_0749 Campylobacter lari RM2100 hypothetical protein YP_002575328.1 715058 R 306263 CDS YP_002575329.1 222823755 7410084 complement(715682..716929) 1 NC_012039.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 716929 rpoN 7410084 rpoN Campylobacter lari RM2100 RNA polymerase factor sigma-54 YP_002575329.1 715682 R 306263 CDS YP_002575330.1 222823756 7410085 complement(716929..717654) 1 NC_012039.1 Pfam match to PF00005.18 ABC_tran; ABC transporter ATP-binding protein 717654 7410085 Cla_0751 Campylobacter lari RM2100 ABC transporter ATP-binding protein YP_002575330.1 716929 R 306263 CDS YP_002575331.1 222823757 7410086 complement(717647..718054) 1 NC_012039.1 Pfam match to PF02367.8 UPF0079; hypothetical protein 718054 7410086 Cla_0752 Campylobacter lari RM2100 hypothetical protein YP_002575331.1 717647 R 306263 CDS YP_002575332.1 222823758 7410087 complement(718051..718299) 1 NC_012039.1 Pfam match to PF01479.16 S4; S4 RNA-binding domain protein 718299 7410087 Cla_0753 Campylobacter lari RM2100 S4 RNA-binding domain protein YP_002575332.1 718051 R 306263 CDS YP_002575333.1 222823759 7410088 718413..719633 1 NC_012039.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 719633 argG 7410088 argG Campylobacter lari RM2100 argininosuccinate synthase YP_002575333.1 718413 D 306263 CDS YP_002575334.1 222823760 7410089 719643..720086 1 NC_012039.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 720086 rplI 7410089 rplI Campylobacter lari RM2100 50S ribosomal protein L9 YP_002575334.1 719643 D 306263 CDS YP_002575335.1 222823761 7410090 720086..720628 1 NC_012039.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 720628 hslV 7410090 hslV Campylobacter lari RM2100 ATP-dependent protease peptidase subunit YP_002575335.1 720086 D 306263 CDS YP_002575336.1 222823762 7410091 720625..721944 1 NC_012039.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 721944 hslU 7410091 hslU Campylobacter lari RM2100 ATP-dependent protease ATP-binding subunit HslU YP_002575336.1 720625 D 306263 CDS YP_002575337.1 222823763 7410092 721941..722813 1 NC_012039.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 722813 era 7410092 era Campylobacter lari RM2100 GTP-binding protein Era YP_002575337.1 721941 D 306263 CDS YP_002575338.1 222823764 7410093 722803..723813 1 NC_012039.1 hypothetical protein 723813 7410093 Cla_0759 Campylobacter lari RM2100 hypothetical protein YP_002575338.1 722803 D 306263 CDS YP_002575339.1 222823765 7410094 723776..724315 1 NC_012039.1 hypothetical protein 724315 7410094 Cla_0760 Campylobacter lari RM2100 hypothetical protein YP_002575339.1 723776 D 306263 CDS YP_002575340.1 222823766 7410096 complement(724663..724878) 1 NC_012039.1 hypothetical protein 724878 7410096 Cla_0762 Campylobacter lari RM2100 hypothetical protein YP_002575340.1 724663 R 306263 CDS YP_002575341.1 222823767 7410097 complement(724875..725246) 1 NC_012039.1 flagellin specific chaperone; flagellar protein FliS 725246 fliS 7410097 fliS Campylobacter lari RM2100 flagellar protein FliS YP_002575341.1 724875 R 306263 CDS YP_002575342.1 222823768 7410098 complement(725265..727565) 1 NC_012039.1 Pfam matches to PF02465.9 FliD_N, and to PF07196.4 Flagellin_IN; flagellar filament cap protein FliD 727565 fliD 7410098 fliD Campylobacter lari RM2100 flagellar filament cap protein FliD YP_002575342.1 725265 R 306263 CDS YP_002575343.1 222823769 7410099 complement(727568..727909) 1 NC_012039.1 Pfam match to PF03646.6 FlaG; flagellar protein FlaG 727909 flaG 7410099 flaG Campylobacter lari RM2100 flagellar protein FlaG YP_002575343.1 727568 R 306263 CDS YP_002575344.1 222823770 7410100 complement(728031..729824) 1 NC_012039.1 Pfam match to PF01977.7 UbiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 729824 ubiD 7410100 ubiD Campylobacter lari RM2100 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_002575344.1 728031 R 306263 CDS YP_002575345.1 222823771 7410101 complement(729825..730751) 1 NC_012039.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 730751 hemC 7410101 hemC Campylobacter lari RM2100 porphobilinogen deaminase YP_002575345.1 729825 R 306263 CDS YP_002575346.1 222823772 7410102 complement(730742..731137) 1 NC_012039.1 hypothetical protein 731137 7410102 Cla_0768 Campylobacter lari RM2100 hypothetical protein YP_002575346.1 730742 R 306263 CDS YP_002575347.1 222823773 7410103 complement(731134..732831) 1 NC_012039.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 732831 proS 7410103 proS Campylobacter lari RM2100 prolyl-tRNA synthetase YP_002575347.1 731134 R 306263 CDS YP_002575348.1 222823774 7410104 complement(732821..734128) 1 NC_012039.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 734128 hemA 7410104 hemA Campylobacter lari RM2100 glutamyl-tRNA reductase YP_002575348.1 732821 R 306263 CDS YP_002575349.1 222823775 7410105 complement(734128..735021) 1 NC_012039.1 Pfam match to PF00348.8 polyprenyl_synt; polyprenyl synthetase 735021 ispB 7410105 ispB Campylobacter lari RM2100 polyprenyl synthetase YP_002575349.1 734128 R 306263 CDS YP_002575350.1 222823776 7410106 complement(735072..735500) 1 NC_012039.1 hypothetical protein 735500 7410106 Cla_0772 Campylobacter lari RM2100 hypothetical protein YP_002575350.1 735072 R 306263 CDS YP_002575351.1 222823777 7410107 complement(735503..735766) 1 NC_012039.1 Pfam match to PF09442.1 DUF2018; hypothetical protein 735766 7410107 Cla_0773 Campylobacter lari RM2100 hypothetical protein YP_002575351.1 735503 R 306263 CDS YP_002575352.1 222823778 7410108 complement(735770..736396) 1 NC_012039.1 Pfam match to PF00702.17 Hydrolase; HAD superfamily hydrolase 736396 7410108 Cla_0774 Campylobacter lari RM2100 HAD superfamily hydrolase YP_002575352.1 735770 R 306263 CDS YP_002575353.1 222823779 7410109 complement(736393..736725) 1 NC_012039.1 hypothetical protein 736725 7410109 Cla_0775 Campylobacter lari RM2100 hypothetical protein YP_002575353.1 736393 R 306263 CDS YP_002575354.1 222823780 7410110 complement(736722..738347) 1 NC_012039.1 Pfam matches to PF00999.12 Na_H_Exchanger, and to PF02254.9 TrkA_N; sodium/hydrogen exchanger family protein 738347 7410110 Cla_0776 Campylobacter lari RM2100 sodium/hydrogen exchanger family protein YP_002575354.1 736722 R 306263 CDS YP_002575355.1 222823781 7410111 complement(738372..738746) 1 NC_012039.1 Pfam match to PF00376.14 MerR; MerR family transcriptional regulator 738746 hspR 7410111 hspR Campylobacter lari RM2100 MerR family transcriptional regulator YP_002575355.1 738372 R 306263 CDS YP_002575356.1 222823782 7410112 complement(738756..739622) 1 NC_012039.1 Pfam matches to PF00226.22 DnaJ, and to PF01556.9 DnaJ_C; co-chaperone-curved DNA binding protein A 739622 cbpA 7410112 cbpA Campylobacter lari RM2100 co-chaperone-curved DNA binding protein A YP_002575356.1 738756 R 306263 CDS YP_002575357.1 222823783 7410113 739772..741190 1 NC_012039.1 Pfam match to PF00089.17 Trypsin; periplasmic serine protease DO; heat shock protein HtrA 741190 htrA 7410113 htrA Campylobacter lari RM2100 periplasmic serine protease DO; heat shock protein HtrA YP_002575357.1 739772 D 306263 CDS YP_002575358.1 222823784 7410114 741203..741877 1 NC_012039.1 Pfam matches to PF00072.15 Response_reg, and to PF00486.19 Trans_reg_C; two-component response regulator 741877 7410114 Cla_0780 Campylobacter lari RM2100 two-component response regulator YP_002575358.1 741203 D 306263 CDS YP_002575359.1 222823785 7410115 741874..743118 1 NC_012039.1 Pfam matches to PF00672.16 HAMP, and to PF00512.16 HisKA; two-component sensor histidine kinase 743118 7410115 Cla_0781 Campylobacter lari RM2100 two-component sensor histidine kinase YP_002575359.1 741874 D 306263 CDS YP_002575360.1 222823786 7410116 743126..745153 1 NC_012039.1 Pfam match to PF00580.12 UvrD-helicase; ATP-dependent DNA helicase 745153 rep 7410116 rep Campylobacter lari RM2100 ATP-dependent DNA helicase YP_002575360.1 743126 D 306263 CDS YP_002575361.1 222823787 7410117 745208..745732 1 NC_012039.1 Pfam match to PF08534.1 Redoxin; thiol peroxidase 745732 tpx 7410117 tpx Campylobacter lari RM2100 thiol peroxidase YP_002575361.1 745208 D 306263 CDS YP_002575362.1 222823788 7410118 745772..746377 1 NC_012039.1 Pfam match to PF00325.11 Crp; Crp/Fnr family transcriptional regulator 746377 7410118 Cla_0784 Campylobacter lari RM2100 Crp/Fnr family transcriptional regulator YP_002575362.1 745772 D 306263 CDS YP_002575363.1 222823789 7410119 746437..746637 1 NC_012039.1 hypothetical protein 746637 7410119 Cla_0785 Campylobacter lari RM2100 hypothetical protein YP_002575363.1 746437 D 306263 CDS YP_002575364.1 222823790 7410120 complement(746634..747140) 1 NC_012039.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 747140 msrA 7410120 msrA Campylobacter lari RM2100 methionine sulfoxide reductase A YP_002575364.1 746634 R 306263 CDS YP_002575365.1 222823791 7410121 complement(747130..747495) 1 NC_012039.1 Pfam match to PF01155.10 HypA; hydrogenase expression/formation protein HypA 747495 hypA 7410121 hypA Campylobacter lari RM2100 hydrogenase expression/formation protein HypA YP_002575365.1 747130 R 306263 CDS YP_002575366.1 222823792 7410122 complement(747495..748505) 1 NC_012039.1 Pfam matches to PF00586.15 AIRS, and to PF02769.13 AIRS_C; hydrogenase expression/formation protein HypE 748505 hypE 7410122 hypE Campylobacter lari RM2100 hydrogenase expression/formation protein HypE YP_002575366.1 747495 R 306263 CDS YP_002575367.1 222823793 7410123 complement(748468..749559) 1 NC_012039.1 Pfam match to PF01924.7 HypD; hydrogenase expression/formation protein HypD 749559 hypD 7410123 hypD Campylobacter lari RM2100 hydrogenase expression/formation protein HypD YP_002575367.1 748468 R 306263 CDS YP_002575368.1 222823794 7410124 complement(749546..749827) 1 NC_012039.1 Pfam match to PF01455.9 HupF_HypC; hydrogenase assembly chaperone HypC 749827 hypC 7410124 hypC Campylobacter lari RM2100 hydrogenase assembly chaperone HypC YP_002575368.1 749546 R 306263 CDS YP_002575369.1 222823795 7410125 complement(749827..750561) 1 NC_012039.1 Pfam match to PF02492.10 cobW; hydrogenase accessory protein HypB 750561 hypB 7410125 hypB Campylobacter lari RM2100 hydrogenase accessory protein HypB YP_002575369.1 749827 R 306263 CDS YP_002575370.1 222823796 7410126 complement(750625..752823) 1 NC_012039.1 Pfam matches to PF00708.9 Acylphosphatase, and to PF07503.3 zf-HYPF; transcriptional regulatory protein HypF 752823 hypF 7410126 hypF Campylobacter lari RM2100 transcriptional regulatory protein HypF YP_002575370.1 750625 R 306263 CDS YP_002575371.1 222823797 7410127 complement(752804..754363) 1 NC_012039.1 hypothetical protein 754363 7410127 Cla_0793 Campylobacter lari RM2100 hypothetical protein YP_002575371.1 752804 R 306263 CDS YP_002575372.1 222823798 7410128 complement(754395..755060) 1 NC_012039.1 Pfam match to PF01863.8 DUF45; hypothetical protein 755060 7410128 Cla_0794 Campylobacter lari RM2100 hypothetical protein YP_002575372.1 754395 R 306263 CDS YP_002575373.1 222823799 7410129 complement(755036..756352) 1 NC_012039.1 Pfam matches to PF01554.9 MatE, and to PF01554.9 MatE; hypothetical protein 756352 7410129 Cla_0795 Campylobacter lari RM2100 hypothetical protein YP_002575373.1 755036 R 306263 CDS YP_002575374.1 222823800 7410130 complement(756999..757643) 1 NC_012039.1 contains poly-GC tract -leading to end point slips (G9/G10); hypothetical protein 757643 7410130 Cla_0796 Campylobacter lari RM2100 hypothetical protein YP_002575374.1 756999 R 306263 CDS YP_002575375.1 222823801 7410131 complement(757645..758877) 1 NC_012039.1 hypothetical protein 758877 7410131 Cla_0797 Campylobacter lari RM2100 hypothetical protein YP_002575375.1 757645 R 306263 CDS YP_002575376.1 222823802 7410132 complement(758934..759674) 1 NC_012039.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein 759674 pstB 7410132 pstB Campylobacter lari RM2100 phosphate ABC transporter ATP-binding protein YP_002575376.1 758934 R 306263 CDS YP_002575377.1 222823803 7410133 complement(759671..760759) 1 NC_012039.1 Pfam match to PF00528.13 BPD_transp_1; phosphate ABC transporter permease 760759 pstA 7410133 pstA Campylobacter lari RM2100 phosphate ABC transporter permease YP_002575377.1 759671 R 306263 CDS YP_002575378.1 222823804 7410134 complement(760756..761670) 1 NC_012039.1 Pfam match to PF00528.13 BPD_transp_1; phosphate ABC transporter permease 761670 pstC 7410134 pstC Campylobacter lari RM2100 phosphate ABC transporter permease YP_002575378.1 760756 R 306263 CDS YP_002575379.1 222823805 7410135 complement(761685..762668) 1 NC_012039.1 phosphate ABC transporter substrate-binding protein 762668 pstS 7410135 pstS Campylobacter lari RM2100 phosphate ABC transporter substrate-binding protein YP_002575379.1 761685 R 306263 CDS YP_002575380.1 222823806 7410136 762753..763412 1 NC_012039.1 Pfam matches to PF00072.15 Response_reg, and to PF00486.19 Trans_reg_C; two-component response regulator 763412 7410136 Cla_0802 Campylobacter lari RM2100 two-component response regulator YP_002575380.1 762753 D 306263 CDS YP_002575381.1 222823807 7410137 763406..764695 1 NC_012039.1 Pfam matches to PF00512.16 HisKA, and to PF02518.17 HATPase_c; two-component sensor histidine kinase 764695 7410137 Cla_0803 Campylobacter lari RM2100 two-component sensor histidine kinase YP_002575381.1 763406 D 306263 CDS YP_002575382.1 222823808 7410138 764774..765268 1 NC_012039.1 Pfam match to PF00210.15 Ferritin; ferritin 765268 cft 7410138 cft Campylobacter lari RM2100 ferritin YP_002575382.1 764774 D 306263 CDS YP_002575383.1 222823809 7410139 765377..766012 1 NC_012039.1 Pfam match to PF00717.14 Peptidase_S24; peptidase S24 766012 7410139 Cla_0805 Campylobacter lari RM2100 peptidase S24 YP_002575383.1 765377 D 306263 CDS YP_002575384.1 222823810 7410140 766195..768132 1 NC_012039.1 cytochrome c family protein 768132 7410140 Cla_0806 Campylobacter lari RM2100 cytochrome c family protein YP_002575384.1 766195 D 306263 CDS YP_002575385.1 222823811 7410141 768180..770246 1 NC_012039.1 cytochrome c family protein 770246 7410141 Cla_0807 Campylobacter lari RM2100 cytochrome c family protein YP_002575385.1 768180 D 306263 CDS YP_002575386.1 222823812 7410142 770303..770902 1 NC_012039.1 hypothetical protein 770902 7410142 Cla_0808 Campylobacter lari RM2100 hypothetical protein YP_002575386.1 770303 D 306263 CDS YP_002575387.1 222823813 7410143 770912..773611 1 NC_012039.1 Pfam match to PF01578.11 Cytochrom_C_asm; cytochrome c biogenesis protein 773611 7410143 Cla_0809 Campylobacter lari RM2100 cytochrome c biogenesis protein YP_002575387.1 770912 D 306263 CDS YP_002575388.1 222823814 7410144 complement(773613..773837) 1 NC_012039.1 hypothetical protein 773837 7410144 Cla_0810 Campylobacter lari RM2100 hypothetical protein YP_002575388.1 773613 R 306263 CDS YP_002575389.1 222823815 7410145 complement(773830..774789) 1 NC_012039.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 774789 lpxD 7410145 lpxD Campylobacter lari RM2100 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_002575389.1 773830 R 306263 CDS YP_002575390.1 222823816 7410146 complement(774786..775253) 1 NC_012039.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 775253 ilvH 7410146 ilvH Campylobacter lari RM2100 acetolactate synthase 3 regulatory subunit YP_002575390.1 774786 R 306263 CDS YP_002575391.1 222823817 7410147 complement(775250..776959) 1 NC_012039.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine resistant; also known as acetolactate synthase 3 large subunit; acetolactate synthase 3 catalytic subunit 776959 ilvB 7410147 ilvB Campylobacter lari RM2100 acetolactate synthase 3 catalytic subunit YP_002575391.1 775250 R 306263 CDS YP_002575392.1 222823818 7410148 complement(777043..777600) 1 NC_012039.1 Pfam match to PF01558.9 POR; 2-oxoglutarate-acceptor oxidoreductase subunit OorC 777600 oorC 7410148 oorC Campylobacter lari RM2100 2-oxoglutarate-acceptor oxidoreductase subunit OorC YP_002575392.1 777043 R 306263 CDS YP_002575393.1 222823819 7410149 complement(777597..778442) 1 NC_012039.1 Pfam match to PF02775.12 TPP_enzyme_C; 2-oxoglutarate-acceptor oxidoreductase subunit OorB 778442 oorB 7410149 oorB Campylobacter lari RM2100 2-oxoglutarate-acceptor oxidoreductase subunit OorB YP_002575393.1 777597 R 306263 CDS YP_002575394.1 222823820 7410150 complement(778444..779568) 1 NC_012039.1 Pfam match to PF01855.10 POR_N; 2-oxoglutarate-acceptor oxidoreductase subunit OorA 779568 oorA 7410150 oorA Campylobacter lari RM2100 2-oxoglutarate-acceptor oxidoreductase subunit OorA YP_002575394.1 778444 R 306263 CDS YP_002575395.1 222823821 7410151 complement(779577..779885) 1 NC_012039.1 Pfam matches to PF00037.18 Fer4, and to PF00037.18 Fer4; 2-oxoglutarate-acceptor oxidoreductase subunit OorD 779885 oorD 7410151 oorD Campylobacter lari RM2100 2-oxoglutarate-acceptor oxidoreductase subunit OorD YP_002575395.1 779577 R 306263 CDS YP_002575396.1 222823822 7410398 complement(780062..780958) 1 NC_012039.1 Pfam matches to PF00056.14 Ldh_1_N, and to PF02866.9 Ldh_1_C; malate dehydrogenase 780958 mdh 7410398 mdh Campylobacter lari RM2100 malate dehydrogenase YP_002575396.1 780062 R 306263 CDS YP_002575397.1 222823823 7410399 complement(780977..783547) 1 NC_012039.1 hypothetical protein 783547 7410399 Cla_0819 Campylobacter lari RM2100 hypothetical protein YP_002575397.1 780977 R 306263 CDS YP_002575398.1 222823824 7410400 783465..784418 1 NC_012039.1 Pfam match to PF02618.7 ADC_lyase; 4-amino-4-deoxychorismate lyase 784418 pabC 7410400 pabC Campylobacter lari RM2100 4-amino-4-deoxychorismate lyase YP_002575398.1 783465 D 306263 CDS YP_002575399.1 222823825 7410401 complement(784419..787193) 1 NC_012039.1 contains alternative start; Pfam matches to PF01580.9 FtsK_SpoIIIE, and to PF09397.1 Ftsk_gamma; DNA translocase FtsK 787193 ftsK 7410401 ftsK Campylobacter lari RM2100 DNA translocase FtsK YP_002575399.1 784419 R 306263 CDS YP_002575400.1 222823826 7410402 complement(787297..789531) 1 NC_012039.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; lagellar hook-associated protein FlgL 789531 7410402 Cla_0822 Campylobacter lari RM2100 lagellar hook-associated protein FlgL YP_002575400.1 787297 R 306263 CDS YP_002575401.1 222823827 7410404 789967..791145 1 NC_012039.1 Pfam match to PF00589.13 Phage_integrase; site-specific recombinase, phage integrase 791145 7410404 Cla_0824 Campylobacter lari RM2100 site-specific recombinase, phage integrase YP_002575401.1 789967 D 306263 CDS YP_002575402.1 222823828 7410405 complement(791138..791323) 1 NC_012039.1 hypothetical protein 791323 7410405 Cla_0825 Campylobacter lari RM2100 hypothetical protein YP_002575402.1 791138 R 306263 CDS YP_002575403.1 222823829 7410406 complement(791325..791681) 1 NC_012039.1 hypothetical protein 791681 7410406 Cla_0826 Campylobacter lari RM2100 hypothetical protein YP_002575403.1 791325 R 306263 CDS YP_002575404.1 222823830 7410407 complement(791697..791903) 1 NC_012039.1 hypothetical protein 791903 7410407 Cla_0827 Campylobacter lari RM2100 hypothetical protein YP_002575404.1 791697 R 306263 CDS YP_002575405.1 222823831 7410408 complement(791887..792261) 1 NC_012039.1 hypothetical protein 792261 7410408 Cla_0828 Campylobacter lari RM2100 hypothetical protein YP_002575405.1 791887 R 306263 CDS YP_002575406.1 222823832 7410409 complement(792258..793124) 1 NC_012039.1 hypothetical protein 793124 7410409 Cla_0829 Campylobacter lari RM2100 hypothetical protein YP_002575406.1 792258 R 306263 CDS YP_002575407.1 222823833 7410410 complement(793145..793303) 1 NC_012039.1 hypothetical protein 793303 7410410 Cla_0830 Campylobacter lari RM2100 hypothetical protein YP_002575407.1 793145 R 306263 CDS YP_002575408.1 222823834 7410411 complement(793306..793485) 1 NC_012039.1 hypothetical protein 793485 7410411 Cla_0831 Campylobacter lari RM2100 hypothetical protein YP_002575408.1 793306 R 306263 CDS YP_002575409.1 222823835 7410412 complement(793834..794133) 1 NC_012039.1 hypothetical protein 794133 7410412 Cla_0832 Campylobacter lari RM2100 hypothetical protein YP_002575409.1 793834 R 306263 CDS YP_002575410.1 222823836 7410413 complement(794134..794412) 1 NC_012039.1 hypothetical protein 794412 7410413 Cla_0833 Campylobacter lari RM2100 hypothetical protein YP_002575410.1 794134 R 306263 CDS YP_002575411.1 222823837 7410414 794602..794985 1 NC_012039.1 Pfam match to PF07022.4 Phage_CI_repr; transcriptional regulator 794985 7410414 Cla_0834 Campylobacter lari RM2100 transcriptional regulator YP_002575411.1 794602 D 306263 CDS YP_002575412.1 222823838 7410415 794988..795293 1 NC_012039.1 hypothetical protein 795293 7410415 Cla_0835 Campylobacter lari RM2100 hypothetical protein YP_002575412.1 794988 D 306263 CDS YP_002575413.1 222823839 7410416 795294..796673 1 NC_012039.1 Pfam match to PF00929.15 Exonuc_X-T; exonuclease 796673 7410416 Cla_0836 Campylobacter lari RM2100 exonuclease YP_002575413.1 795294 D 306263 CDS YP_002575414.1 222823840 7410417 796828..797871 1 NC_012039.1 Pfam match to PF04313.5 HSDR_N; hypothetical protein 797871 7410417 Cla_0837 Campylobacter lari RM2100 hypothetical protein YP_002575414.1 796828 D 306263 CDS YP_002575415.1 222823841 7410418 797896..799719 1 NC_012039.1 Pfam match to PF07693.5 KAP_NTPase; KAP family 799719 7410418 Cla_0838 Campylobacter lari RM2100 KAP family YP_002575415.1 797896 D 306263 CDS YP_002575416.1 222823842 7410419 complement(799700..799969) 1 NC_012039.1 hypothetical protein 799969 7410419 Cla_0839 Campylobacter lari RM2100 hypothetical protein YP_002575416.1 799700 R 306263 CDS YP_002575417.1 222823843 7410420 complement(799836..800225) 1 NC_012039.1 hypothetical protein 800225 7410420 Cla_0840 Campylobacter lari RM2100 hypothetical protein YP_002575417.1 799836 R 306263 CDS YP_002575418.1 222823844 7410421 complement(800455..800922) 1 NC_012039.1 hypothetical protein 800922 7410421 Cla_0841 Campylobacter lari RM2100 hypothetical protein YP_002575418.1 800455 R 306263 CDS YP_002575419.1 222823845 7410422 complement(800923..802221) 1 NC_012039.1 hypothetical protein 802221 7410422 Cla_0842 Campylobacter lari RM2100 hypothetical protein YP_002575419.1 800923 R 306263 CDS YP_002575420.1 222823846 7410423 complement(802222..802593) 1 NC_012039.1 Pfam match to PF07087.2 DUF1353; hypothetical protein 802593 7410423 Cla_0843 Campylobacter lari RM2100 hypothetical protein YP_002575420.1 802222 R 306263 CDS YP_002575421.1 222823847 7410424 complement(802574..803071) 1 NC_012039.1 hypothetical protein 803071 7410424 Cla_0844 Campylobacter lari RM2100 hypothetical protein YP_002575421.1 802574 R 306263 CDS YP_002575422.1 222823848 7410425 complement(803073..803708) 1 NC_012039.1 hypothetical protein 803708 7410425 Cla_0845 Campylobacter lari RM2100 hypothetical protein YP_002575422.1 803073 R 306263 CDS YP_002575423.1 222823849 7410426 complement(803718..804167) 1 NC_012039.1 hypothetical protein 804167 7410426 Cla_0846 Campylobacter lari RM2100 hypothetical protein YP_002575423.1 803718 R 306263 CDS YP_002575424.1 222823850 7410427 complement(804169..805761) 1 NC_012039.1 hypothetical protein 805761 7410427 Cla_0847 Campylobacter lari RM2100 hypothetical protein YP_002575424.1 804169 R 306263 CDS YP_002575425.1 222823851 7410428 complement(805761..806372) 1 NC_012039.1 hypothetical protein 806372 7410428 Cla_0848 Campylobacter lari RM2100 hypothetical protein YP_002575425.1 805761 R 306263 CDS YP_002575426.1 222823852 7410429 complement(806359..806685) 1 NC_012039.1 hypothetical protein 806685 7410429 Cla_0849 Campylobacter lari RM2100 hypothetical protein YP_002575426.1 806359 R 306263 CDS YP_002575427.1 222823853 7410430 complement(806695..807132) 1 NC_012039.1 hypothetical protein 807132 7410430 Cla_0850 Campylobacter lari RM2100 hypothetical protein YP_002575427.1 806695 R 306263 CDS YP_002575428.1 222823854 7410431 complement(807129..807371) 1 NC_012039.1 hypothetical protein 807371 7410431 Cla_0851 Campylobacter lari RM2100 hypothetical protein YP_002575428.1 807129 R 306263 CDS YP_002575429.1 222823855 7410432 complement(807382..808542) 1 NC_012039.1 Pfam match to PF05065.4 Phage_capsid; major capsid protein, HK97 family 808542 7410432 Cla_0852 Campylobacter lari RM2100 major capsid protein, HK97 family YP_002575429.1 807382 R 306263 CDS YP_002575430.1 222823856 7410433 complement(808554..809105) 1 NC_012039.1 hypothetical protein 809105 7410433 Cla_0853 Campylobacter lari RM2100 hypothetical protein YP_002575430.1 808554 R 306263 CDS YP_002575431.1 222823857 7410434 complement(809175..810044) 1 NC_012039.1 hypothetical protein 810044 7410434 Cla_0854 Campylobacter lari RM2100 hypothetical protein YP_002575431.1 809175 R 306263 CDS YP_002575432.1 222823858 7410435 complement(810041..815530) 1 NC_012039.1 hypothetical protein 815530 7410435 Cla_0855 Campylobacter lari RM2100 hypothetical protein YP_002575432.1 810041 R 306263 CDS YP_002575433.1 222823859 7410436 complement(815554..815895) 1 NC_012039.1 hypothetical protein 815895 7410436 Cla_0856 Campylobacter lari RM2100 hypothetical protein YP_002575433.1 815554 R 306263 CDS YP_002575434.1 222823860 7410437 complement(815902..816120) 1 NC_012039.1 hypothetical protein 816120 7410437 Cla_0857 Campylobacter lari RM2100 hypothetical protein YP_002575434.1 815902 R 306263 CDS YP_002575435.1 222823861 7410438 complement(816201..816563) 1 NC_012039.1 hypothetical protein 816563 7410438 Cla_0858 Campylobacter lari RM2100 hypothetical protein YP_002575435.1 816201 R 306263 CDS YP_002575436.1 222823862 7410439 complement(816560..817534) 1 NC_012039.1 hypothetical protein 817534 7410439 Cla_0859 Campylobacter lari RM2100 hypothetical protein YP_002575436.1 816560 R 306263 CDS YP_002575437.1 222823863 7410440 complement(817598..817948) 1 NC_012039.1 hypothetical protein 817948 7410440 Cla_0860 Campylobacter lari RM2100 hypothetical protein YP_002575437.1 817598 R 306263 CDS YP_002575438.1 222823864 7410441 complement(817949..818473) 1 NC_012039.1 phage protein, HK97 gp10 family 818473 7410441 Cla_0861 Campylobacter lari RM2100 phage protein, HK97 gp10 family YP_002575438.1 817949 R 306263 CDS YP_002575439.1 222823865 7410442 complement(818461..819630) 1 NC_012039.1 Pfam match to PF04860.3 Phage_portal; phage portal protein, HK97 family 819630 7410442 Cla_0862 Campylobacter lari RM2100 phage portal protein, HK97 family YP_002575439.1 818461 R 306263 CDS YP_002575440.1 222823866 7410443 complement(819709..820440) 1 NC_012039.1 Pfam match to PF09669.1 Phage_pRha; phage protein 820440 7410443 Cla_0863 Campylobacter lari RM2100 phage protein YP_002575440.1 819709 R 306263 CDS YP_002575441.1 222823867 7410444 820831..821631 1 NC_012039.1 hypothetical protein 821631 7410444 Cla_0864 Campylobacter lari RM2100 hypothetical protein YP_002575441.1 820831 D 306263 CDS YP_002575442.1 222823868 7410445 821817..821993 1 NC_012039.1 hypothetical protein 821993 7410445 Cla_0865 Campylobacter lari RM2100 hypothetical protein YP_002575442.1 821817 D 306263 CDS YP_002575443.1 222823869 7410446 821941..822408 1 NC_012039.1 hypothetical protein 822408 7410446 Cla_0866 Campylobacter lari RM2100 hypothetical protein YP_002575443.1 821941 D 306263 CDS YP_002575444.1 222823870 7410447 complement(822480..824111) 1 NC_012039.1 Pfam match to PF03354.6 Terminase_1; phage terminase, large subunit 824111 7410447 Cla_0867 Campylobacter lari RM2100 phage terminase, large subunit YP_002575444.1 822480 R 306263 CDS YP_002575445.1 222823871 7410448 complement(824104..824739) 1 NC_012039.1 phage terminase, small subunit 824739 7410448 Cla_0868 Campylobacter lari RM2100 phage terminase, small subunit YP_002575445.1 824104 R 306263 CDS YP_002575446.1 222823872 7410449 complement(824983..825333) 1 NC_012039.1 Pfam match to PF01844.14 HNH; HNH endonuclease domain protein 825333 7410449 Cla_0869 Campylobacter lari RM2100 HNH endonuclease domain protein YP_002575446.1 824983 R 306263 CDS YP_002575447.1 222823873 7410450 complement(825330..825608) 1 NC_012039.1 hypothetical protein 825608 7410450 Cla_0870 Campylobacter lari RM2100 hypothetical protein YP_002575447.1 825330 R 306263 CDS YP_002575448.1 222823874 7410451 complement(827360..827611) 1 NC_012039.1 hypothetical protein 827611 7410451 Cla_0871 Campylobacter lari RM2100 hypothetical protein YP_002575448.1 827360 R 306263 CDS YP_002575449.1 222823875 7410452 828146..829066 1 NC_012039.1 Pfam match to PF08279.3 HTH_11; transcriptional regulator 829066 7410452 Cla_0872 Campylobacter lari RM2100 transcriptional regulator YP_002575449.1 828146 D 306263 CDS YP_002575450.1 222823876 7410453 complement(829071..830465) 1 NC_012039.1 hypothetical protein 830465 7410453 Cla_0873 Campylobacter lari RM2100 hypothetical protein YP_002575450.1 829071 R 306263 CDS YP_002575451.1 222823877 7410454 830571..831119 1 NC_012039.1 hypothetical protein 831119 7410454 Cla_0874 Campylobacter lari RM2100 hypothetical protein YP_002575451.1 830571 D 306263 CDS YP_002575452.1 222823878 7410455 831116..831883 1 NC_012039.1 Pfam match to PF04371.6 PAD_porph; peptidyl-arginine deiminase 831883 7410455 Cla_0875 Campylobacter lari RM2100 peptidyl-arginine deiminase YP_002575452.1 831116 D 306263 CDS YP_002575453.1 222823879 7410456 831908..832528 1 NC_012039.1 hypothetical protein 832528 7410456 Cla_0876 Campylobacter lari RM2100 hypothetical protein YP_002575453.1 831908 D 306263 CDS YP_002575454.1 222823880 7410457 832604..834526 1 NC_012039.1 Pfam match to PF00004.20 AAA; ATPase AAA 834526 7410457 Cla_0877 Campylobacter lari RM2100 ATPase AAA YP_002575454.1 832604 D 306263 CDS YP_002575455.1 222823881 7410458 834540..835232 1 NC_012039.1 hypothetical protein 835232 7410458 Cla_0878 Campylobacter lari RM2100 hypothetical protein YP_002575455.1 834540 D 306263 CDS YP_002575456.1 222823882 7410459 complement(835224..836603) 1 NC_012039.1 hypothetical protein 836603 7410459 Cla_0879 Campylobacter lari RM2100 hypothetical protein YP_002575456.1 835224 R 306263 CDS YP_002575457.1 222823883 7410460 complement(836545..838461) 1 NC_012039.1 Pfam match to PF07728.5 AAA_5; ATPase AAA 838461 7410460 Cla_0880 Campylobacter lari RM2100 ATPase AAA YP_002575457.1 836545 R 306263 CDS YP_002575458.1 222823884 7410461 838658..839221 1 NC_012039.1 hypothetical protein 839221 7410461 Cla_0881 Campylobacter lari RM2100 hypothetical protein YP_002575458.1 838658 D 306263 CDS YP_002575459.1 222823885 7410463 840976..841521 1 NC_012039.1 Pfam matches to PF07656.2 KWG, and to PF07656.2 KWG; hypothetical protein 841521 7410463 Cla_0883 Campylobacter lari RM2100 hypothetical protein YP_002575459.1 840976 D 306263 CDS YP_002575460.1 222823886 7410464 complement(841831..842163) 1 NC_012039.1 hypothetical protein 842163 7410464 Cla_0884 Campylobacter lari RM2100 hypothetical protein YP_002575460.1 841831 R 306263 CDS YP_002575461.1 222823887 7410465 complement(842150..843319) 1 NC_012039.1 hypothetical protein 843319 7410465 Cla_0885 Campylobacter lari RM2100 hypothetical protein YP_002575461.1 842150 R 306263 CDS YP_002575462.1 222823888 7410466 complement(843322..843672) 1 NC_012039.1 hypothetical protein 843672 7410466 Cla_0886 Campylobacter lari RM2100 hypothetical protein YP_002575462.1 843322 R 306263 CDS YP_002575463.1 222823889 7410467 complement(843682..845229) 1 NC_012039.1 Pfam match to PF07656.2 KWG; hypothetical protein 845229 7410467 Cla_0887 Campylobacter lari RM2100 hypothetical protein YP_002575463.1 843682 R 306263 CDS YP_002575464.1 222823890 7410468 complement(845641..847770) 1 NC_012039.1 Pfam match to PF03235.5 DUF262; hypothetical protein 847770 7410468 Cla_0888 Campylobacter lari RM2100 hypothetical protein YP_002575464.1 845641 R 306263 CDS YP_002575465.1 222823891 7410469 complement(847782..849137) 1 NC_012039.1 Pfam match to PF03235.5 DUF262; hypothetical protein 849137 7410469 Cla_0889 Campylobacter lari RM2100 hypothetical protein YP_002575465.1 847782 R 306263 CDS YP_002575466.1 222823892 7410470 complement(849165..849992) 1 NC_012039.1 Pfam match to PF02146.8 SIR2; NAD-dependent protein deacetylase (SIR2 family) 849992 7410470 Cla_0890 Campylobacter lari RM2100 NAD-dependent protein deacetylase (SIR2 family) YP_002575466.1 849165 R 306263 CDS YP_002575467.1 222823893 7410471 complement(850002..850430) 1 NC_012039.1 hypothetical protein 850430 7410471 Cla_0891 Campylobacter lari RM2100 hypothetical protein YP_002575467.1 850002 R 306263 CDS YP_002575468.1 222823894 7410472 complement(850498..854091) 1 NC_012039.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 854091 dnaE 7410472 dnaE Campylobacter lari RM2100 DNA polymerase III subunit alpha YP_002575468.1 850498 R 306263 CDS YP_002575469.1 222823895 7410473 complement(854177..854428) 1 NC_012039.1 hypothetical protein 854428 7410473 Cla_0893 Campylobacter lari RM2100 hypothetical protein YP_002575469.1 854177 R 306263 CDS YP_002575470.1 222823896 7410474 complement(854458..855024) 1 NC_012039.1 Pfam match to PF01965.15 DJ-1_PfpI; 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein 855024 thiJ 7410474 thiJ Campylobacter lari RM2100 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein YP_002575470.1 854458 R 306263 CDS YP_002575471.1 222823897 7410475 complement(855035..855907) 1 NC_012039.1 Pfam match to PF00795.13 CN_hydrolase; hydrolase, carbon-nitrogen family 855907 7410475 Cla_0895 Campylobacter lari RM2100 hydrolase, carbon-nitrogen family YP_002575471.1 855035 R 306263 CDS YP_002575472.1 222823898 7410476 complement(855876..856790) 1 NC_012039.1 Pfam match to PF01545.12 Cation_efflux; cation efflux family protein 856790 7410476 Cla_0896 Campylobacter lari RM2100 cation efflux family protein YP_002575472.1 855876 R 306263 CDS YP_002575473.1 222823899 7410477 complement(856787..857764) 1 NC_012039.1 Pfam match to PF04371.6 PAD_porph; peptidyl-arginine deiminase 857764 7410477 Cla_0897 Campylobacter lari RM2100 peptidyl-arginine deiminase YP_002575473.1 856787 R 306263 CDS YP_002575474.1 222823900 7410478 complement(857821..858102) 1 NC_012039.1 hypothetical protein 858102 7410478 Cla_0898 Campylobacter lari RM2100 hypothetical protein YP_002575474.1 857821 R 306263 CDS YP_002575475.1 222823901 7410479 complement(858102..858701) 1 NC_012039.1 Pfam match to PF00753.18 Lactamase_B; hydrolase (metallo-beta-lactamase) 858701 7410479 Cla_0899 Campylobacter lari RM2100 hydrolase (metallo-beta-lactamase) YP_002575475.1 858102 R 306263 CDS YP_002575476.1 222823902 7410480 858763..859503 1 NC_012039.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 859503 nadE 7410480 nadE Campylobacter lari RM2100 NAD synthetase YP_002575476.1 858763 D 306263 CDS YP_002575477.1 222823903 7410481 859490..860428 1 NC_012039.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 860428 lpxK 7410481 lpxK Campylobacter lari RM2100 tetraacyldisaccharide 4'-kinase YP_002575477.1 859490 D 306263 CDS YP_002575478.1 222823904 7410482 860403..861812 1 NC_012039.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 861812 thrC 7410482 thrC Campylobacter lari RM2100 threonine synthase YP_002575478.1 860403 D 306263 CDS YP_002575479.1 222823905 7410483 861809..862534 1 NC_012039.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 862534 kdsB 7410483 kdsB Campylobacter lari RM2100 3-deoxy-manno-octulosonate cytidylyltransferase YP_002575479.1 861809 D 306263 CDS YP_002575480.1 222823906 7410484 862531..863295 1 NC_012039.1 Pfam match to PF00497.11 SBP_bac_3; glutamine-binding periplasmic protein 863295 glnH 7410484 glnH Campylobacter lari RM2100 glutamine-binding periplasmic protein YP_002575480.1 862531 D 306263 CDS YP_002575481.1 222823907 7410485 complement(863292..864074) 1 NC_012039.1 Pfam match to PF00528.13 BPD_transp_1; amino acid ABC transporter permease 864074 glnP 7410485 glnP Campylobacter lari RM2100 amino acid ABC transporter permease YP_002575481.1 863292 R 306263 CDS YP_002575482.1 222823908 7410486 864256..865947 1 NC_012039.1 Pfam match to PF02683.6 DsbD; thiol:disulfide interchange protein DsbD 865947 dsbD 7410486 dsbD Campylobacter lari RM2100 thiol:disulfide interchange protein DsbD YP_002575482.1 864256 D 306263 CDS YP_002575483.1 222823909 7410487 865944..866600 1 NC_012039.1 Pfam match to PF03473.8 MOSC; hypothetical protein 866600 7410487 Cla_0907 Campylobacter lari RM2100 hypothetical protein YP_002575483.1 865944 D 306263 CDS YP_002575484.1 222823910 7410488 complement(866593..867768) 1 NC_012039.1 Pfam match to PF00070.18 Pyr_redox; NADH dehydrogenase 867768 ndh 7410488 ndh Campylobacter lari RM2100 NADH dehydrogenase YP_002575484.1 866593 R 306263 CDS YP_002575485.1 222823911 7410489 867871..869235 1 NC_012039.1 Pfam match to PF00209.9 SNF; sodium-dependent transporter (SNF family) 869235 7410489 Cla_0909 Campylobacter lari RM2100 sodium-dependent transporter (SNF family) YP_002575485.1 867871 D 306263 CDS YP_002575486.1 222823912 7410491 complement(870076..871026) 1 NC_012039.1 Pfam match to PF00691.11 OmpA; chemotaxis protein MotB 871026 7410491 Cla_0911 Campylobacter lari RM2100 chemotaxis protein MotB YP_002575486.1 870076 R 306263 CDS YP_002575487.1 222823913 7410492 complement(871013..872344) 1 NC_012039.1 hypothetical protein 872344 7410492 Cla_0912 Campylobacter lari RM2100 hypothetical protein YP_002575487.1 871013 R 306263 CDS YP_002575488.1 222823914 7410493 complement(872420..873484) 1 NC_012039.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 873484 fba 7410493 fba Campylobacter lari RM2100 fructose-bisphosphate aldolase YP_002575488.1 872420 R 306263 CDS YP_002575489.1 222823915 7410494 complement(873484..874299) 1 NC_012039.1 Pfam match to PF00639.12 Rotamase; hypothetical protein 874299 peb4 7410494 peb4 Campylobacter lari RM2100 hypothetical protein YP_002575489.1 873484 R 306263 CDS YP_002575490.1 222823916 7410495 874379..875005 1 NC_012039.1 Pfam match to PF00730.16 HhH-GPD; endonuclease III 875005 nth 7410495 nth Campylobacter lari RM2100 endonuclease III YP_002575490.1 874379 D 306263 CDS YP_002575491.1 222823917 7410496 complement(875029..876237) 1 NC_012039.1 Pfam match to PF03616.5 Glt_symporter; sodium/glutamate symport carrier protein 876237 gltS 7410496 gltS Campylobacter lari RM2100 sodium/glutamate symport carrier protein YP_002575491.1 875029 R 306263 CDS YP_002575492.1 222823918 7410497 complement(876353..877693) 1 NC_012039.1 Pfam match to PF02321.9 OEP; outer membrane efflux protein 877693 7410497 Cla_0917 Campylobacter lari RM2100 outer membrane efflux protein YP_002575492.1 876353 R 306263 CDS YP_002575493.1 222823919 7410498 complement(877695..879626) 1 NC_012039.1 Pfam matches to PF00005.18 ABC_tran, and to PF02687.12 FtsX; ABC transporter ATP-binding protein 879626 7410498 Cla_0918 Campylobacter lari RM2100 ABC transporter ATP-binding protein YP_002575493.1 877695 R 306263 CDS YP_002575494.1 222823920 7410499 complement(879623..880756) 1 NC_012039.1 Pfam match to PF00529.11 HlyD; AcrA/AcrE family efflux protein 880756 7410499 Cla_0919 Campylobacter lari RM2100 AcrA/AcrE family efflux protein YP_002575494.1 879623 R 306263 CDS YP_002575495.1 222823921 7410500 880884..881492 1 NC_012039.1 Pfam match to PF00881.15 Nitroreductase; nitroreductase 881492 rdxA 7410500 rdxA Campylobacter lari RM2100 nitroreductase YP_002575495.1 880884 D 306263 CDS YP_002575496.1 222823922 7410501 881562..885074 1 NC_012039.1 Pfam matches to PF07690.7 MFS_1, and to PF01553.12 Acyltransferase; 2-acyl-glycerophospho-ethanolamine acyltransferase 885074 aas 7410501 aas Campylobacter lari RM2100 2-acyl-glycerophospho-ethanolamine acyltransferase YP_002575496.1 881562 D 306263 CDS YP_002575497.1 222823923 7410502 885339..886283 1 NC_012039.1 Pfam match to PF00070.18 Pyr_redox; pyridine nucleotide-disulfide oxidoreductase 886283 7410502 Cla_0922 Campylobacter lari RM2100 pyridine nucleotide-disulfide oxidoreductase YP_002575497.1 885339 D 306263 CDS YP_002575498.1 222823924 7410503 886277..886969 1 NC_012039.1 Pfam match to PF05175.5 MTS; methylase 886969 7410503 Cla_0923 Campylobacter lari RM2100 methylase YP_002575498.1 886277 D 306263 CDS YP_002575499.1 222823925 7410504 886962..887330 1 NC_012039.1 Pfam match to PF03692.6 UPF0153; hypothetical protein 887330 7410504 Cla_0924 Campylobacter lari RM2100 hypothetical protein YP_002575499.1 886962 D 306263 CDS YP_002575500.1 222823926 7410505 887306..888541 1 NC_012039.1 ATP-dependent nuclease 888541 7410505 Cla_0925 Campylobacter lari RM2100 ATP-dependent nuclease YP_002575500.1 887306 D 306263 CDS YP_002575501.1 222823927 7410506 888526..889128 1 NC_012039.1 Pfam match to PF00218.12 IGPS; indole-3-glycerol phosphate synthase 889128 7410506 Cla_0926 Campylobacter lari RM2100 indole-3-glycerol phosphate synthase YP_002575501.1 888526 D 306263 CDS YP_002575502.1 222823928 7410507 889128..889616 1 NC_012039.1 Pfam match to PF01230.14 HIT; HIT family hydrolase 889616 7410507 Cla_0927 Campylobacter lari RM2100 HIT family hydrolase YP_002575502.1 889128 D 306263 CDS YP_002575503.1 222823929 7410508 889609..890592 1 NC_012039.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 890592 7410508 Cla_0928 Campylobacter lari RM2100 tRNA 2-selenouridine synthase YP_002575503.1 889609 D 306263 CDS YP_002575504.1 222823930 7410509 complement(890587..892107) 1 NC_012039.1 Pfam match to PF01384.11 PHO4; phosphate-transport permease PitB 892107 pitB 7410509 pitB Campylobacter lari RM2100 phosphate-transport permease PitB YP_002575504.1 890587 R 306263 CDS YP_002575505.1 222823931 7410510 complement(892154..893254) 1 NC_012039.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 893254 pdxA 7410510 pdxA Campylobacter lari RM2100 4-hydroxythreonine-4-phosphate dehydrogenase YP_002575505.1 892154 R 306263 CDS YP_002575506.1 222823932 7410511 complement(893251..894018) 1 NC_012039.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 894018 pdxJ 7410511 pdxJ Campylobacter lari RM2100 pyridoxine 5'-phosphate synthase YP_002575506.1 893251 R 306263 CDS YP_002575507.1 222823933 7410512 894074..895039 1 NC_012039.1 Pfam match to PF02541.7 Ppx-GppA; Ppx/GppA phosphatase 895039 7410512 Cla_0932 Campylobacter lari RM2100 Ppx/GppA phosphatase YP_002575507.1 894074 D 306263 CDS YP_002575508.1 222823934 7410513 895050..895493 1 NC_012039.1 Pfam match to PF09424.1 YqeY; GatB/YqeY family 895493 7410513 Cla_0933 Campylobacter lari RM2100 GatB/YqeY family YP_002575508.1 895050 D 306263 CDS YP_002575509.1 222823935 7410514 895490..896143 1 NC_012039.1 Pfam match to PF01223.14 Endonuclease_NS; DNA/RNA non-specific endonuclease 896143 7410514 Cla_0934 Campylobacter lari RM2100 DNA/RNA non-specific endonuclease YP_002575509.1 895490 D 306263 CDS YP_002575510.1 222823936 7410515 complement(896177..898045) 1 NC_012039.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 898045 dnaK 7410515 dnaK Campylobacter lari RM2100 molecular chaperone DnaK YP_002575510.1 896177 R 306263 CDS YP_002575511.1 222823937 7410516 complement(898067..898576) 1 NC_012039.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 898576 grpE 7410516 grpE Campylobacter lari RM2100 heat shock protein GrpE YP_002575511.1 898067 R 306263 CDS YP_002575512.1 222823938 7410517 complement(898573..899355) 1 NC_012039.1 Acts as a negative regulator of the grpE-dnaK-dnaJ and groELS class I heat shock operons by preventing heat-shock induction; heat-inducible transcription repressor 899355 hrcA 7410517 hrcA Campylobacter lari RM2100 heat-inducible transcription repressor YP_002575512.1 898573 R 306263 CDS YP_002575513.1 222823939 7410518 complement(899718..900347) 1 NC_012039.1 hypothetical protein 900347 7410518 Cla_0938 Campylobacter lari RM2100 hypothetical protein YP_002575513.1 899718 R 306263 CDS YP_002575514.1 222823940 7410519 complement(900344..900574) 1 NC_012039.1 hypothetical protein 900574 7410519 Cla_0939 Campylobacter lari RM2100 hypothetical protein YP_002575514.1 900344 R 306263 CDS YP_002575515.1 222823941 7410520 complement(900558..901610) 1 NC_012039.1 hypothetical protein 901610 7410520 Cla_0940 Campylobacter lari RM2100 hypothetical protein YP_002575515.1 900558 R 306263 CDS YP_002575516.1 222823942 7410521 complement(901620..903779) 1 NC_012039.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 903779 flhA 7410521 flhA Campylobacter lari RM2100 flagellar biosynthesis protein FlhA YP_002575516.1 901620 R 306263 CDS YP_002575517.1 222823943 7410522 complement(903772..904176) 1 NC_012039.1 Pfam match to PF02082.11 Rrf2; BadM/Rrf2 family transcriptional regulator 904176 7410522 Cla_0942 Campylobacter lari RM2100 BadM/Rrf2 family transcriptional regulator YP_002575517.1 903772 R 306263 CDS YP_002575518.1 222823944 7410523 904352..904624 1 NC_012039.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 904624 rpsO 7410523 rpsO Campylobacter lari RM2100 30S ribosomal protein S15 YP_002575518.1 904352 D 306263 CDS YP_002575519.1 222823945 7410524 complement(904813..905706) 1 NC_012039.1 Pfam match to PF01189.8 Nol1_Nop2_Fmu; NOL1/NOP2/sun family protein 905706 7410524 Cla_0944 Campylobacter lari RM2100 NOL1/NOP2/sun family protein YP_002575519.1 904813 R 306263 CDS YP_002575520.1 222823946 7410525 complement(905693..906079) 1 NC_012039.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 906079 7410525 Cla_0945 Campylobacter lari RM2100 Holliday junction resolvase-like protein YP_002575520.1 905693 R 306263 CDS YP_002575521.1 222823947 7410526 complement(906076..906843) 1 NC_012039.1 Pfam match to PF02481.6 SMF; DNA processing protein A 906843 dprA 7410526 dprA Campylobacter lari RM2100 DNA processing protein A YP_002575521.1 906076 R 306263 CDS YP_002575522.1 222823948 7410527 complement(906830..907897) 1 NC_012039.1 Pfam match to PF04748.4 Polysacc_deac_2; polysaccharide deacetylase 907897 7410527 Cla_0947 Campylobacter lari RM2100 polysaccharide deacetylase YP_002575522.1 906830 R 306263 CDS YP_002575523.1 222823949 7410528 complement(907899..908921) 1 NC_012039.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 908921 ilvC 7410528 ilvC Campylobacter lari RM2100 ketol-acid reductoisomerase YP_002575523.1 907899 R 306263 CDS YP_002575524.1 222823950 7410529 909031..910971 1 NC_012039.1 Pfam match to PF00773.10 RNB; ribonuclease R 910971 rnr 7410529 rnr Campylobacter lari RM2100 ribonuclease R YP_002575524.1 909031 D 306263 CDS YP_002575525.1 222823951 7410530 910964..911929 1 NC_012039.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 911929 7410530 Cla_0950 Campylobacter lari RM2100 DNA polymerase III subunit delta YP_002575525.1 910964 D 306263 CDS YP_002575526.1 222823952 7410531 912021..912395 1 NC_012039.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 912395 rpsF 7410531 rpsF Campylobacter lari RM2100 30S ribosomal protein S6 YP_002575526.1 912021 D 306263 CDS YP_002575527.1 222823953 7410532 912399..912926 1 NC_012039.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 912926 ssb 7410532 ssb Campylobacter lari RM2100 single-stranded DNA-binding protein YP_002575527.1 912399 D 306263 CDS YP_002575528.1 222823954 7410533 912937..913197 1 NC_012039.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 913197 rpsR 7410533 rpsR Campylobacter lari RM2100 30S ribosomal protein S18 YP_002575528.1 912937 D 306263 CDS YP_002575529.1 222823955 7410534 913249..913890 1 NC_012039.1 Pfam match to PF01914.8 MarC; integral membrane protein, MarC family 913890 7410534 Cla_0954 Campylobacter lari RM2100 integral membrane protein, MarC family YP_002575529.1 913249 D 306263 CDS YP_002575530.1 222823956 7410535 complement(913872..914294) 1 NC_012039.1 periplasmic protein 914294 7410535 Cla_0955 Campylobacter lari RM2100 periplasmic protein YP_002575530.1 913872 R 306263 CDS YP_002575531.1 222823957 7410536 complement(914291..915019) 1 NC_012039.1 Pfam match to PF07963.3 N_methyl; hypothetical protein 915019 7410536 Cla_0956 Campylobacter lari RM2100 hypothetical protein YP_002575531.1 914291 R 306263 CDS YP_002575532.1 222823958 7410537 complement(915003..915299) 1 NC_012039.1 hypothetical protein 915299 7410537 Cla_0957 Campylobacter lari RM2100 hypothetical protein YP_002575532.1 915003 R 306263 CDS YP_002575533.1 222823959 7410538 complement(915296..915991) 1 NC_012039.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 915991 proC 7410538 proC Campylobacter lari RM2100 pyrroline-5-carboxylate reductase YP_002575533.1 915296 R 306263 CDS YP_002575534.1 222823960 7410539 complement(916024..916419) 1 NC_012039.1 binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW 916419 7410539 Cla_0959 Campylobacter lari RM2100 flagellar assembly protein FliW YP_002575534.1 916024 R 306263 CDS YP_002575535.1 222823961 7410540 916596..917252 1 NC_012039.1 hypothetical protein 917252 7410540 Cla_0960 Campylobacter lari RM2100 hypothetical protein YP_002575535.1 916596 D 306263 CDS YP_002575536.1 222823962 7410541 917252..919630 1 NC_012039.1 Pfam matches to PF00004.20 AAA, and to PF05362.4 Lon_C; DNA-binding, ATP-dependent protease La 919630 lon 7410541 lon Campylobacter lari RM2100 DNA-binding, ATP-dependent protease La YP_002575536.1 917252 D 306263 CDS YP_002575537.1 222823963 7410542 complement(919642..921018) 1 NC_012039.1 Pfam match to PF00015.12 MCPsignal; MCP-domain signal transduction protein 921018 7410542 Cla_0962 Campylobacter lari RM2100 MCP-domain signal transduction protein YP_002575537.1 919642 R 306263 CDS YP_002575538.1 222823964 7410543 complement(921029..921520) 1 NC_012039.1 Pfam match to PF08447.2 PAS_3; PAS domain signal transduction sensor protein 921520 7410543 Cla_0963 Campylobacter lari RM2100 PAS domain signal transduction sensor protein YP_002575538.1 921029 R 306263 CDS YP_002575539.1 222823965 7410544 complement(921603..922094) 1 NC_012039.1 Pfam match to PF08447.2 PAS_3; PAS domain signal transduction sensor protein 922094 7410544 Cla_0964 Campylobacter lari RM2100 PAS domain signal transduction sensor protein YP_002575539.1 921603 R 306263 CDS YP_002575540.1 222823966 7410545 complement(922138..923349) 1 NC_012039.1 catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase 923349 ilvA 7410545 ilvA Campylobacter lari RM2100 threonine dehydratase YP_002575540.1 922138 R 306263 CDS YP_002575541.1 222823967 7410546 complement(923352..923741) 1 NC_012039.1 Pfam match to PF02629.10 CoA_binding; CoA-binding domain protein 923741 7410546 Cla_0966 Campylobacter lari RM2100 CoA-binding domain protein YP_002575541.1 923352 R 306263 CDS YP_002575542.1 222823968 7410547 complement(923779..924951) 1 NC_012039.1 Pfam match to PF07690.7 MFS_1; major facilitator superfamily transporter 924951 7410547 Cla_0967 Campylobacter lari RM2100 major facilitator superfamily transporter YP_002575542.1 923779 R 306263 CDS YP_002575543.1 222823969 7410549 complement(925440..926480) 1 NC_012039.1 catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase 926480 trmA 7410549 trmA Campylobacter lari RM2100 tRNA (uracil-5-)-methyltransferase YP_002575543.1 925440 R 306263 CDS YP_002575544.1 222823970 7410550 complement(926481..928193) 1 NC_012039.1 Pfam match to PF03553.5 Na_H_antiporter; Na+/H+ antiporter family protein 928193 7410550 Cla_0970 Campylobacter lari RM2100 Na+/H+ antiporter family protein YP_002575544.1 926481 R 306263 CDS YP_002575545.1 222823971 7410551 complement(928210..928956) 1 NC_012039.1 Pfam match to PF00106.16 adh_short; oxidoreductase, short chain dehydrogenase/reductase 928956 7410551 Cla_0971 Campylobacter lari RM2100 oxidoreductase, short chain dehydrogenase/reductase YP_002575545.1 928210 R 306263 CDS YP_002575546.1 222823972 7410552 complement(928953..930200) 1 NC_012039.1 Pfam match to PF00023.21 Ank; ankyrin repeat domain protein 930200 7410552 Cla_0972 Campylobacter lari RM2100 ankyrin repeat domain protein YP_002575546.1 928953 R 306263 CDS YP_002575547.1 222823973 7410553 930310..930762 1 NC_012039.1 Pfam match to PF01035.11 DNA_binding_1; methylated-DNA--protein-cysteine methyltransferase 930762 ogt 7410553 ogt Campylobacter lari RM2100 methylated-DNA--protein-cysteine methyltransferase YP_002575547.1 930310 D 306263 CDS YP_002575548.1 222823974 7410554 930764..931642 1 NC_012039.1 Pfam match to PF00892.11 DUF6; MadN family (DUF6 domain protein) 931642 7410554 Cla_0974 Campylobacter lari RM2100 MadN family (DUF6 domain protein) YP_002575548.1 930764 D 306263 CDS YP_002575549.1 222823975 7410555 complement(931596..932330) 1 NC_012039.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 932330 truA 7410555 truA Campylobacter lari RM2100 tRNA pseudouridine synthase A YP_002575549.1 931596 R 306263 CDS YP_002575550.1 222823976 7410556 complement(932331..933356) 1 NC_012039.1 Pfam match to PF03739.5 YjgP_YjgQ; permease, YjgP/YjgQ family 933356 7410556 Cla_0976 Campylobacter lari RM2100 permease, YjgP/YjgQ family YP_002575550.1 932331 R 306263 CDS YP_002575551.1 222823977 7410557 complement(933353..934099) 1 NC_012039.1 Pfam match to PF06750.4 DiS_P_DiS; peptidase, A24 family 934099 7410557 Cla_0977 Campylobacter lari RM2100 peptidase, A24 family YP_002575551.1 933353 R 306263 CDS YP_002575552.1 222823978 7410558 complement(934096..934764) 1 NC_012039.1 Pfam match to PF01255.10 Prenyltransf; UDP diphosphate synthetase 934764 uppS 7410558 uppS Campylobacter lari RM2100 UDP diphosphate synthetase YP_002575552.1 934096 R 306263 CDS YP_002575553.1 222823979 7410559 complement(934766..935389) 1 NC_012039.1 hypothetical protein 935389 7410559 Cla_0979 Campylobacter lari RM2100 hypothetical protein YP_002575553.1 934766 R 306263 CDS YP_002575554.1 222823980 7410560 complement(935383..936540) 1 NC_012039.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 936540 dfp 7410560 dfp Campylobacter lari RM2100 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_002575554.1 935383 R 306263 CDS YP_002575555.1 222823981 7410561 complement(936537..937826) 1 NC_012039.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 937826 glmU 7410561 glmU Campylobacter lari RM2100 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_002575555.1 936537 R 306263 CDS YP_002575556.1 222823982 7410562 937964..938698 1 NC_012039.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 938698 fliP 7410562 fliP Campylobacter lari RM2100 flagellar biosynthesis protein FliP YP_002575556.1 937964 D 306263 CDS YP_002575557.1 222823983 7409822 938708..939619 1 NC_012039.1 Pfam match to PF03547.9 Mem_trans; hypothetical protein 939619 7409822 Cla_0983 Campylobacter lari RM2100 hypothetical protein YP_002575557.1 938708 D 306263 CDS YP_002575558.1 222823984 7410719 939628..941376 1 NC_012039.1 Pfam match to PF00425.9 Chorismate_bind; para-aminobenzoate synthase component I, ADC synthase 941376 pabB 7410719 pabB Campylobacter lari RM2100 para-aminobenzoate synthase component I, ADC synthase YP_002575558.1 939628 D 306263 CDS YP_002575559.1 222823985 7410720 941373..941945 1 NC_012039.1 Pfam match to PF00117.19 GATase; para-aminobenzoate synthase component II, glutamine amidotransferase 941945 pabA 7410720 pabA Campylobacter lari RM2100 para-aminobenzoate synthase component II, glutamine amidotransferase YP_002575559.1 941373 D 306263 CDS YP_002575560.1 222823986 7410721 941981..943237 1 NC_012039.1 Pfam matches to PF02321.9 OEP, and to PF02321.9 OEP; outer membrane component of efflux system 943237 cmeD 7410721 cmeD Campylobacter lari RM2100 outer membrane component of efflux system YP_002575560.1 941981 D 306263 CDS YP_002575561.1 222823987 7410722 943234..943974 1 NC_012039.1 membrane fusion component of efflux system 943974 cmeE 7410722 cmeE Campylobacter lari RM2100 membrane fusion component of efflux system YP_002575561.1 943234 D 306263 CDS YP_002575562.1 222823988 7410723 943977..946991 1 NC_012039.1 Pfam match to PF00873.10 ACR_tran; integral membrane component of efflux system 946991 cmeF 7410723 cmeF Campylobacter lari RM2100 integral membrane component of efflux system YP_002575562.1 943977 D 306263 CDS YP_002575563.1 222823989 7410724 complement(946992..947321) 1 NC_012039.1 Pfam match to PF03960.6 ArsC; ArsC family transcriptional regulator 947321 7410724 Cla_0989 Campylobacter lari RM2100 ArsC family transcriptional regulator YP_002575563.1 946992 R 306263 CDS YP_002575564.1 222823990 7410725 complement(947315..948655) 1 NC_012039.1 Pfam match to PF01474.7 DAHP_synth_2; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 948655 aroG 7410725 aroG Campylobacter lari RM2100 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase YP_002575564.1 947315 R 306263 CDS YP_002575565.1 222823991 7410726 complement(948708..949061) 1 NC_012039.1 hypothetical protein 949061 7410726 Cla_0991 Campylobacter lari RM2100 hypothetical protein YP_002575565.1 948708 R 306263 CDS YP_002575566.1 222823992 7410727 complement(949064..949420) 1 NC_012039.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 949420 rplS 7410727 rplS Campylobacter lari RM2100 50S ribosomal protein L19 YP_002575566.1 949064 R 306263 CDS YP_002575567.1 222823993 7410728 complement(949432..950136) 1 NC_012039.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 950136 trmD 7410728 trmD Campylobacter lari RM2100 tRNA (guanine-N(1)-)-methyltransferase YP_002575567.1 949432 R 306263 CDS YP_002575568.1 222823994 7410729 complement(950133..950609) 1 NC_012039.1 Pfam match to PF05239.7 PRC; 16S rRNA processing protein 950609 rimM 7410729 rimM Campylobacter lari RM2100 16S rRNA processing protein YP_002575568.1 950133 R 306263 CDS YP_002575569.1 222823995 7410730 complement(950647..950892) 1 NC_012039.1 hypothetical protein 950892 7410730 Cla_0995 Campylobacter lari RM2100 hypothetical protein YP_002575569.1 950647 R 306263 CDS YP_002575570.1 222823996 7410731 complement(950895..951122) 1 NC_012039.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 951122 rpsP 7410731 rpsP Campylobacter lari RM2100 30S ribosomal protein S16 YP_002575570.1 950895 R 306263 CDS YP_002575571.1 222823997 7410732 complement(951194..952531) 1 NC_012039.1 Pfam matches to PF02881.10 SRP54_N, and to PF00448.13 SRP54; signal recognition particle protein 952531 ffh 7410732 ffh Campylobacter lari RM2100 signal recognition particle protein YP_002575571.1 951194 R 306263 CDS YP_002575572.1 222823998 7410733 complement(952595..953347) 1 NC_012039.1 Pfam match to PF00849.13 PseudoU_synth_2; ribosomal large subunit pseudouridine synthase 953347 7410733 Cla_0998 Campylobacter lari RM2100 ribosomal large subunit pseudouridine synthase YP_002575572.1 952595 R 306263 CDS YP_002575573.1 222823999 7410734 complement(953328..954512) 1 NC_012039.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 954512 kdtA 7410734 kdtA Campylobacter lari RM2100 3-deoxy-D-manno-octulosonic-acid transferase YP_002575573.1 953328 R 306263 CDS YP_002575574.1 222824000 7410735 complement(954509..955228) 1 NC_012039.1 Pfam match to PF02591.6 DUF164; hypothetical protein 955228 7410735 Cla_1000 Campylobacter lari RM2100 hypothetical protein YP_002575574.1 954509 R 306263 CDS YP_002575575.1 222824001 7410736 complement(955240..955965) 1 NC_012039.1 Pfam match to PF01784.9 NIF3; hypothetical protein 955965 7410736 Cla_1001 Campylobacter lari RM2100 hypothetical protein YP_002575575.1 955240 R 306263 CDS YP_002575576.1 222824002 7410737 complement(955955..956815) 1 NC_012039.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 956815 glyQ 7410737 glyQ Campylobacter lari RM2100 glycyl-tRNA synthetase subunit alpha YP_002575576.1 955955 R 306263 CDS YP_002575577.1 222824003 7410738 complement(956812..957318) 1 NC_012039.1 hypothetical protein 957318 7410738 Cla_1003 Campylobacter lari RM2100 hypothetical protein YP_002575577.1 956812 R 306263 CDS YP_002575578.1 222824004 7410739 complement(957328..957822) 1 NC_012039.1 Pfam match to PF00731.11 AIRC; phosphoribosylaminoimidazole carboxylase, catalytic subunit 957822 purE 7410739 purE Campylobacter lari RM2100 phosphoribosylaminoimidazole carboxylase, catalytic subunit YP_002575578.1 957328 R 306263 CDS YP_002575579.1 222824005 7410740 complement(957819..959075) 1 NC_012039.1 Pfam match to PF01136.10 Peptidase_U32; peptidase U32 959075 7410740 Cla_1005 Campylobacter lari RM2100 peptidase U32 YP_002575579.1 957819 R 306263 CDS YP_002575580.1 222824006 7410741 complement(959072..959779) 1 NC_012039.1 hypothetical protein 959779 7410741 Cla_1006 Campylobacter lari RM2100 hypothetical protein YP_002575580.1 959072 R 306263 CDS YP_002575581.1 222824007 7410742 959982..961412 1 NC_012039.1 Pfam matches to PF03951.10 Gln-synt_N, and to PF00120.15 Gln-synt_C; glutamine synthetase 961412 glnA 7410742 glnA Campylobacter lari RM2100 glutamine synthetase YP_002575581.1 959982 D 306263 CDS YP_002575582.1 222824008 7410743 complement(961441..963375) 1 NC_012039.1 Pfam matches to PF01743.11 PolyA_pol, and to PF00551.10 Formyl_trans_N; tRNA nucleotidyltransferase/formyltetrahydrofolate deformylase 963375 cca 7410743 cca Campylobacter lari RM2100 tRNA nucleotidyltransferase/formyltetrahydrofolate deformylase YP_002575582.1 961441 R 306263 CDS YP_002575583.1 222824009 7410744 complement(963344..963769) 1 NC_012039.1 hypothetical protein 963769 7410744 Cla_1009 Campylobacter lari RM2100 hypothetical protein YP_002575583.1 963344 R 306263 CDS YP_002575584.1 222824010 7410745 complement(963766..964011) 1 NC_012039.1 hypothetical protein 964011 7410745 Cla_1010 Campylobacter lari RM2100 hypothetical protein YP_002575584.1 963766 R 306263 CDS YP_002575585.1 222824011 7410746 complement(964077..965249) 1 NC_012039.1 Pfam match to PF07690.7 MFS_1; major facilitator superfamily transporter 965249 7410746 Cla_1011 Campylobacter lari RM2100 major facilitator superfamily transporter YP_002575585.1 964077 R 306263 CDS YP_002575586.1 222824012 7410747 complement(965252..965419) 1 NC_012039.1 hypothetical protein 965419 7410747 Cla_1012 Campylobacter lari RM2100 hypothetical protein YP_002575586.1 965252 R 306263 CDS YP_002575587.1 222824013 7410748 complement(965422..965757) 1 NC_012039.1 periplasmic nitrate reductase assembly protein 965757 napD 7410748 napD Campylobacter lari RM2100 periplasmic nitrate reductase assembly protein YP_002575587.1 965422 R 306263 CDS YP_002575588.1 222824014 7410749 complement(965744..966670) 1 NC_012039.1 periplasmic protein NapL 966670 napL 7410749 napL Campylobacter lari RM2100 periplasmic protein NapL YP_002575588.1 965744 R 306263 CDS YP_002575589.1 222824015 7410750 complement(966675..967193) 1 NC_012039.1 Pfam match to PF03892.5 NapB; periplasmic nitrate reductase, small subunit, cytochrome c-type protein 967193 napB 7410750 napB Campylobacter lari RM2100 periplasmic nitrate reductase, small subunit, cytochrome c-type protein YP_002575589.1 966675 R 306263 CDS YP_002575590.1 222824016 7410751 complement(967183..967974) 1 NC_012039.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; quinol dehydrogenase membrane component 967974 napH 7410751 napH Campylobacter lari RM2100 quinol dehydrogenase membrane component YP_002575590.1 967183 R 306263 CDS YP_002575591.1 222824017 7410752 complement(967971..968720) 1 NC_012039.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway; quinol dehydrogenase periplasmic component 968720 napG 7410752 napG Campylobacter lari RM2100 quinol dehydrogenase periplasmic component YP_002575591.1 967971 R 306263 CDS YP_002575592.1 222824018 7410753 complement(968723..971497) 1 NC_012039.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 971497 napA 7410753 napA Campylobacter lari RM2100 nitrate reductase catalytic subunit YP_002575592.1 968723 R 306263 CDS YP_002575593.1 222824019 7410754 complement(971665..972459) 1 NC_012039.1 makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 972459 flgG 7410754 flgG Campylobacter lari RM2100 flagellar basal body rod protein FlgG YP_002575593.1 971665 R 306263 CDS YP_002575594.1 222824020 7410755 complement(972477..973286) 1 NC_012039.1 Pfam match to PF00460.11 Flg_bb_rod; flagellar distal rod protein FlgG 973286 flgG2 7410755 flgG2 Campylobacter lari RM2100 flagellar distal rod protein FlgG YP_002575594.1 972477 R 306263 CDS YP_002575595.1 222824021 7410756 973422..975299 1 NC_012039.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 975299 rpoD 7410756 rpoD Campylobacter lari RM2100 RNA polymerase sigma factor RpoD YP_002575595.1 973422 D 306263 CDS YP_002575596.1 222824022 7410757 complement(975320..977413) 1 NC_012039.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 977413 ppk 7410757 ppk Campylobacter lari RM2100 polyphosphate kinase YP_002575596.1 975320 R 306263 CDS YP_002575597.1 222824023 7410758 977642..978136 1 NC_012039.1 cytochrome c nitrite reductase, small subunit NrfH 978136 nrfH 7410758 nrfH Campylobacter lari RM2100 cytochrome c nitrite reductase, small subunit NrfH YP_002575597.1 977642 D 306263 CDS YP_002575598.1 222824024 7410759 978153..979970 1 NC_012039.1 Pfam match to PF02335.6 Cytochrom_C552; cytochrome c nitrite reductase, catalytic subunit NrfA 979970 nrfA 7410759 nrfA Campylobacter lari RM2100 cytochrome c nitrite reductase, catalytic subunit NrfA YP_002575598.1 978153 D 306263 CDS YP_002575599.1 222824025 7410760 complement(979998..981299) 1 NC_012039.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 981299 thiC 7410760 thiC Campylobacter lari RM2100 thiamine biosynthesis protein ThiC YP_002575599.1 979998 R 306263 CDS YP_002575600.1 222824026 7410761 complement(981486..982250) 1 NC_012039.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 982250 dnaQ 7410761 dnaQ Campylobacter lari RM2100 DNA polymerase III subunit epsilon YP_002575600.1 981486 R 306263 CDS YP_002575601.1 222824027 7410762 complement(982247..982894) 1 NC_012039.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 982894 rpe 7410762 rpe Campylobacter lari RM2100 ribulose-phosphate 3-epimerase YP_002575601.1 982247 R 306263 CDS YP_002575602.1 222824028 7410763 983037..983231 1 NC_012039.1 required for 70S ribosome assembly; 50S ribosomal protein L28 983231 rpmB 7410763 rpmB Campylobacter lari RM2100 50S ribosomal protein L28 YP_002575602.1 983037 D 306263 CDS YP_002575603.1 222824029 7410764 983257..984384 1 NC_012039.1 Pfam matches to PF07885.7 Ion_trans_2, and to PF02254.9 TrkA_N; hypothetical protein 984384 7410764 Cla_1030 Campylobacter lari RM2100 hypothetical protein YP_002575603.1 983257 D 306263 CDS YP_002575604.1 222824030 7410765 984432..984647 1 NC_012039.1 Pfam match to PF04325.4 DUF465; hypothetical protein 984647 7410765 Cla_1031 Campylobacter lari RM2100 hypothetical protein YP_002575604.1 984432 D 306263 CDS YP_002575605.1 222824031 7410766 984681..985808 1 NC_012039.1 Pfam match to PF00015.12 MCPsignal; MCP-domain signal transduction protein 985808 7410766 Cla_1032 Campylobacter lari RM2100 MCP-domain signal transduction protein YP_002575605.1 984681 D 306263 CDS YP_002575606.1 222824032 7410767 complement(985819..986388) 1 NC_012039.1 Pfam match to PF00293.19 NUDIX; NUDIX domain protein 986388 7410767 Cla_1033 Campylobacter lari RM2100 NUDIX domain protein YP_002575606.1 985819 R 306263 CDS YP_002575607.1 222824033 7410768 complement(986509..988146) 1 NC_012039.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 988146 groEL 7410768 groEL Campylobacter lari RM2100 molecular chaperone GroEL YP_002575607.1 986509 R 306263 CDS YP_002575608.1 222824034 7410769 complement(988160..988420) 1 NC_012039.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 988420 groES 7410769 groES Campylobacter lari RM2100 co-chaperonin GroES YP_002575608.1 988160 R 306263 CDS YP_002575609.1 222824035 7410770 988583..991126 1 NC_012039.1 hypothetical protein 991126 7410770 Cla_1036 Campylobacter lari RM2100 hypothetical protein YP_002575609.1 988583 D 306263 CDS YP_002575610.1 222824036 7410771 complement(991161..991679) 1 NC_012039.1 Pfam match to PF02482.10 Ribosomal_S30AE; sigma 54 modulation protein/ribosomal protein S30EA 991679 7410771 Cla_1037 Campylobacter lari RM2100 sigma 54 modulation protein/ribosomal protein S30EA YP_002575610.1 991161 R 306263 CDS YP_002575611.1 222824037 7410772 complement(991760..992440) 1 NC_012039.1 Pfam match to PF00730.16 HhH-GPD; HhH-GPD family protein 992440 7410772 Cla_1038 Campylobacter lari RM2100 HhH-GPD family protein YP_002575611.1 991760 R 306263 CDS YP_002575612.1 222824038 7410773 complement(992437..995376) 1 NC_012039.1 Pfam matches to PF02559.7 CarD_TRCF, and to PF00270.20 DEAD; transcription-repair coupling factor 995376 mfd 7410773 mfd Campylobacter lari RM2100 transcription-repair coupling factor YP_002575612.1 992437 R 306263 CDS YP_002575613.1 222824039 7410774 complement(995366..995770) 1 NC_012039.1 Pfam match to PF04519.4 DUF583; hypothetical protein 995770 7410774 Cla_1040 Campylobacter lari RM2100 hypothetical protein YP_002575613.1 995366 R 306263 CDS YP_002575614.1 222824040 7410775 complement(995698..996606) 1 NC_012039.1 Pfam match to PF01551.13 Peptidase_M23; peptidase, M23/M37 family 996606 7410775 Cla_1041 Campylobacter lari RM2100 peptidase, M23/M37 family YP_002575614.1 995698 R 306263 CDS YP_002575615.1 222824041 7410776 complement(996596..997765) 1 NC_012039.1 Pfam match to PF08245.3 Mur_ligase_M; folylpolyglutamate synthase/dihydrofolate synthase 997765 folC 7410776 folC Campylobacter lari RM2100 folylpolyglutamate synthase/dihydrofolate synthase YP_002575615.1 996596 R 306263 CDS YP_002575616.1 222824042 7410777 complement(997767..999134) 1 NC_012039.1 hypothetical protein 999134 7410777 Cla_1043 Campylobacter lari RM2100 hypothetical protein YP_002575616.1 997767 R 306263 CDS YP_002575617.1 222824043 7410778 complement(999136..999633) 1 NC_012039.1 hypothetical protein 999633 7410778 Cla_1044 Campylobacter lari RM2100 hypothetical protein YP_002575617.1 999136 R 306263 CDS YP_002575618.1 222824044 7410779 complement(999630..1002059) 1 NC_012039.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 1002059 leuS 7410779 leuS Campylobacter lari RM2100 leucyl-tRNA synthetase YP_002575618.1 999630 R 306263 CDS YP_002575619.1 222824045 7410780 complement(1002068..1002409) 1 NC_012039.1 hypothetical protein 1002409 7410780 Cla_1046 Campylobacter lari RM2100 hypothetical protein YP_002575619.1 1002068 R 306263 CDS YP_002575620.1 222824046 7410781 complement(1002412..1003383) 1 NC_012039.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1003383 secF 7410781 secF Campylobacter lari RM2100 preprotein translocase subunit SecF YP_002575620.1 1002412 R 306263 CDS YP_002575621.1 222824047 7410782 complement(1003383..1004963) 1 NC_012039.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1004963 secD 7410782 secD Campylobacter lari RM2100 preprotein translocase subunit SecD YP_002575621.1 1003383 R 306263 CDS YP_002575622.1 222824048 7410783 complement(1004956..1005231) 1 NC_012039.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 1005231 yajC 7410783 yajC Campylobacter lari RM2100 preprotein translocase subunit YajC YP_002575622.1 1004956 R 306263 CDS YP_002575623.1 222824049 7410784 1005201..1006523 1 NC_012039.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 1006523 7410784 Cla_1050 Campylobacter lari RM2100 apolipoprotein N-acyltransferase YP_002575623.1 1005201 D 306263 CDS YP_002575624.1 222824050 7410785 complement(1006534..1007727) 1 NC_012039.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 1007727 metK 7410785 metK Campylobacter lari RM2100 S-adenosylmethionine synthetase YP_002575624.1 1006534 R 306263 CDS YP_002575625.1 222824051 7410786 1007860..1009086 1 NC_012039.1 involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT 1009086 7410786 Cla_1052 Campylobacter lari RM2100 serine/threonine transporter SstT YP_002575625.1 1007860 D 306263 CDS YP_002575626.1 222824052 7410787 1009096..1009974 1 NC_012039.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 1009974 pyrB 7410787 pyrB Campylobacter lari RM2100 aspartate carbamoyltransferase YP_002575626.1 1009096 D 306263 CDS YP_002575627.1 222824053 7410788 1009979..1011700 1 NC_012039.1 Pfam matches to PF08439.1 Peptidase_M3_N, and to PF01432.11 Peptidase_M3; oligoendopeptidase F 1011700 pepF 7410788 pepF Campylobacter lari RM2100 oligoendopeptidase F YP_002575627.1 1009979 D 306263 CDS YP_002575628.1 222824054 7410789 1011693..1012139 1 NC_012039.1 hypothetical protein 1012139 7410789 Cla_1055 Campylobacter lari RM2100 hypothetical protein YP_002575628.1 1011693 D 306263 CDS YP_002575629.1 222824055 7410790 1012136..1014199 1 NC_012039.1 Pfam match to PF00580.12 UvrD-helicase; ATP-dependent DNA helicase 1014199 uvrD 7410790 uvrD Campylobacter lari RM2100 ATP-dependent DNA helicase YP_002575629.1 1012136 D 306263 CDS YP_002575630.1 222824056 7410791 1014196..1015014 1 NC_012039.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1015014 truB 7410791 truB Campylobacter lari RM2100 tRNA pseudouridine synthase B YP_002575630.1 1014196 D 306263 CDS YP_002575631.1 222824057 7410792 1015008..1015235 1 NC_012039.1 Pfam match to PF02599.7 CsrA; carbon storage regulator 1015235 csrA 7410792 csrA Campylobacter lari RM2100 carbon storage regulator YP_002575631.1 1015008 D 306263 CDS YP_002575632.1 222824058 7410793 1015232..1015987 1 NC_012039.1 catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1015987 ispE 7410793 ispE Campylobacter lari RM2100 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_002575632.1 1015232 D 306263 CDS YP_002575633.1 222824059 7410794 1015984..1016442 1 NC_012039.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 1016442 smpB 7410794 smpB Campylobacter lari RM2100 SsrA-binding protein YP_002575633.1 1015984 D 306263 CDS YP_002575634.1 222824060 7410795 1016455..1017072 1 NC_012039.1 Pfam match to PF00085.11 Thioredoxin; periplasmic thioredoxin 1017072 trxC 7410795 trxC Campylobacter lari RM2100 periplasmic thioredoxin YP_002575634.1 1016455 D 306263 CDS YP_002575635.1 222824061 7410796 1017056..1017349 1 NC_012039.1 Pfam match to PF02617.8 ClpS; ATP-dependent Clp protease adaptor protein ClpS 1017349 clpS 7410796 clpS Campylobacter lari RM2100 ATP-dependent Clp protease adaptor protein ClpS YP_002575635.1 1017056 D 306263 CDS YP_002575636.1 222824062 7410797 1017346..1019475 1 NC_012039.1 Pfam matches to PF00004.20 AAA, and to PF07724.5 AAA_2; ATP-dependent ClpAP protease, ATP-binding subunit ClpA 1019475 clpA 7410797 clpA Campylobacter lari RM2100 ATP-dependent ClpAP protease, ATP-binding subunit ClpA YP_002575636.1 1017346 D 306263 CDS YP_002575637.1 222824063 7410798 1019450..1020091 1 NC_012039.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 1020091 aat 7410798 aat Campylobacter lari RM2100 leucyl/phenylalanyl-tRNA--protein transferase YP_002575637.1 1019450 D 306263 CDS YP_002575638.1 222824064 7410799 1020183..1020614 1 NC_012039.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar basal-body rod protein FlgB 1020614 flgB 7410799 flgB Campylobacter lari RM2100 flagellar basal-body rod protein FlgB YP_002575638.1 1020183 D 306263 CDS YP_002575639.1 222824065 7410800 1020625..1021119 1 NC_012039.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 1021119 flgC 7410800 flgC Campylobacter lari RM2100 flagellar basal body rod protein FlgC YP_002575639.1 1020625 D 306263 CDS YP_002575640.1 222824066 7410801 1021123..1021416 1 NC_012039.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 1021416 fliE 7410801 fliE Campylobacter lari RM2100 flagellar hook-basal body protein FliE YP_002575640.1 1021123 D 306263 CDS YP_002575641.1 222824067 7410802 1021474..1023231 1 NC_012039.1 Pfam matches to PF03717.6 PBP_dimer, and to PF00905.13 Transpeptidase; penicillin-binding protein 1023231 pbpB 7410802 pbpB Campylobacter lari RM2100 penicillin-binding protein YP_002575641.1 1021474 D 306263 CDS YP_002575642.1 222824068 7410803 complement(1023261..1024163) 1 NC_012039.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 1024163 hemH 7410803 hemH Campylobacter lari RM2100 ferrochelatase YP_002575642.1 1023261 R 306263 CDS YP_002575643.1 222824069 7410804 complement(1024163..1025023) 1 NC_012039.1 Pfam match to PF01408.13 GFO_IDH_MocA; oxidoreductase, Gfo/Idh/MocA family 1025023 7410804 Cla_1070 Campylobacter lari RM2100 oxidoreductase, Gfo/Idh/MocA family YP_002575643.1 1024163 R 306263 CDS YP_002575644.1 222824070 7410805 complement(1025020..1026102) 1 NC_012039.1 Pfam match to PF01041.8 DegT_DnrJ_EryC1; DegT/DnrJ/EryC1/StrS aminotransferase enzyme 1026102 7410805 Cla_1071 Campylobacter lari RM2100 DegT/DnrJ/EryC1/StrS aminotransferase enzyme YP_002575644.1 1025020 R 306263 CDS YP_002575645.1 222824071 7410806 1026205..1028742 1 NC_012039.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1028742 alaS 7410806 alaS Campylobacter lari RM2100 alanyl-tRNA synthetase YP_002575645.1 1026205 D 306263 CDS YP_002575646.1 222824072 7410807 1028742..1029284 1 NC_012039.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 1029284 maf 7410807 maf Campylobacter lari RM2100 Maf-like protein YP_002575646.1 1028742 D 306263 CDS YP_002575647.1 222824073 7410808 1029281..1031215 1 NC_012039.1 Pfam matches to PF00912.13 Transgly, and to PF00905.13 Transpeptidase; penicillin-binding protein 1A 1031215 pbpA 7410808 pbpA Campylobacter lari RM2100 penicillin-binding protein 1A YP_002575647.1 1029281 D 306263 CDS YP_002575648.1 222824074 7410809 1031301..1032194 1 NC_012039.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; sulfite oxidase subunit YedY 1032194 7410809 Cla_1075 Campylobacter lari RM2100 sulfite oxidase subunit YedY YP_002575648.1 1031301 D 306263 CDS YP_002575649.1 222824075 7410810 1032194..1032754 1 NC_012039.1 Pfam match to PF01794.10 Ferric_reduct; hypothetical protein 1032754 7410810 Cla_1076 Campylobacter lari RM2100 hypothetical protein YP_002575649.1 1032194 D 306263 CDS YP_002575650.1 222824076 7410811 1032844..1034739 1 NC_012039.1 hypothetical protein 1034739 7410811 Cla_1077 Campylobacter lari RM2100 hypothetical protein YP_002575650.1 1032844 D 306263 CDS YP_002575651.1 222824077 7410812 complement(1034802..1036922) 1 NC_012039.1 Pfam matches to PF00403.17 HMA, and to PF00122.11 E1-E2_ATPase; cation-transporting ATPase, P-type 1036922 7410812 Cla_1078 Campylobacter lari RM2100 cation-transporting ATPase, P-type YP_002575651.1 1034802 R 306263 CDS YP_002575652.1 222824078 7410813 complement(1037118..1037432) 1 NC_012039.1 Pfam match to PF00893.10 Multi_Drug_Res; multidrug resistance efflux protein 1037432 7410813 Cla_1079 Campylobacter lari RM2100 multidrug resistance efflux protein YP_002575652.1 1037118 R 306263 CDS YP_002575653.1 222824079 7410814 complement(1037429..1037770) 1 NC_012039.1 Pfam match to PF00893.10 Multi_Drug_Res; multidrug resistance efflux protein 1037770 7410814 Cla_1080 Campylobacter lari RM2100 multidrug resistance efflux protein YP_002575653.1 1037429 R 306263 CDS YP_002575654.1 222824080 7410815 1037922..1038629 1 NC_012039.1 Pfam match to PF01709.11 DUF28; hypothetical protein 1038629 7410815 Cla_1081 Campylobacter lari RM2100 hypothetical protein YP_002575654.1 1037922 D 306263 CDS YP_002575655.1 222824081 7410816 1038639..1039121 1 NC_012039.1 Pfam match to PF00160.12 Pro_isomerase; peptidyl-prolyl cis-trans isomerase 1039121 ppi 7410816 ppi Campylobacter lari RM2100 peptidyl-prolyl cis-trans isomerase YP_002575655.1 1038639 D 306263 CDS YP_002575656.1 222824082 7410817 1039169..1039597 1 NC_012039.1 hypothetical protein 1039597 7410817 Cla_1083 Campylobacter lari RM2100 hypothetical protein YP_002575656.1 1039169 D 306263 CDS YP_002575657.1 222824083 7410818 1039647..1040252 1 NC_012039.1 Pfam match to PF09335.2 SNARE_assoc; DedA-like protein 1040252 7410818 Cla_1084 Campylobacter lari RM2100 DedA-like protein YP_002575657.1 1039647 D 306263 CDS YP_002575658.1 222824084 7410819 1040402..1041178 1 NC_012039.1 Pfam match to PF06738.3 DUF1212; hypothetical protein 1041178 7410819 Cla_1085 Campylobacter lari RM2100 hypothetical protein YP_002575658.1 1040402 D 306263 CDS YP_002575659.1 222824085 7410820 1041175..1041699 1 NC_012039.1 hypothetical protein 1041699 7410820 Cla_1086 Campylobacter lari RM2100 hypothetical protein YP_002575659.1 1041175 D 306263 CDS YP_002575660.1 222824086 7410821 complement(1041690..1043285) 1 NC_012039.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1043285 argS 7410821 argS Campylobacter lari RM2100 arginyl-tRNA synthetase YP_002575660.1 1041690 R 306263 CDS YP_002575661.1 222824087 7410822 complement(1043295..1043534) 1 NC_012039.1 Pfam match to PF02416.7 MttA_Hcf106; Sec-independent protein translocase, MttA/Hcf106 family 1043534 7410822 Cla_1088 Campylobacter lari RM2100 Sec-independent protein translocase, MttA/Hcf106 family YP_002575661.1 1043295 R 306263 CDS YP_002575662.1 222824088 7410823 complement(1043536..1044150) 1 NC_012039.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 1044150 gmk 7410823 gmk Campylobacter lari RM2100 guanylate kinase YP_002575662.1 1043536 R 306263 CDS YP_002575663.1 222824089 7410824 complement(1044147..1045529) 1 NC_012039.1 hypothetical protein 1045529 7410824 Cla_1090 Campylobacter lari RM2100 hypothetical protein YP_002575663.1 1044147 R 306263 CDS YP_002575664.1 222824090 7410825 complement(1045589..1046359) 1 NC_012039.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 1046359 fliR 7410825 fliR Campylobacter lari RM2100 flagellar biosynthesis protein FliR YP_002575664.1 1045589 R 306263 CDS YP_002575665.1 222824091 7410826 complement(1046346..1046981) 1 NC_012039.1 Pfam match to PF00005.18 ABC_tran; ABC transporter ATP-binding protein 1046981 7410826 Cla_1092 Campylobacter lari RM2100 ABC transporter ATP-binding protein YP_002575665.1 1046346 R 306263 CDS YP_002575666.1 222824092 7410827 complement(1046984..1048060) 1 NC_012039.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1048060 tsf 7410827 tsf Campylobacter lari RM2100 elongation factor Ts YP_002575666.1 1046984 R 306263 CDS YP_002575667.1 222824093 7410828 complement(1048060..1048845) 1 NC_012039.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1048845 rpsB 7410828 rpsB Campylobacter lari RM2100 30S ribosomal protein S2 YP_002575667.1 1048060 R 306263 CDS YP_002575668.1 222824094 7410829 complement(1049019..1050146) 1 NC_012039.1 ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit 1050146 petC 7410829 petC Campylobacter lari RM2100 ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit YP_002575668.1 1049019 R 306263 CDS YP_002575669.1 222824095 7410830 complement(1050149..1051393) 1 NC_012039.1 Pfam matches to PF00033.10 Cytochrom_B_N, and to PF00032.8 Cytochrom_B_C; ubiquinol cytochrome c oxidoreductase, cytochrome b subunit 1051393 petB 7410830 petB Campylobacter lari RM2100 ubiquinol cytochrome c oxidoreductase, cytochrome b subunit YP_002575669.1 1050149 R 306263 CDS YP_002575670.1 222824096 7410831 complement(1051395..1051898) 1 NC_012039.1 Pfam match to PF00355.17 Rieske; ubiquinol cytochrome c oxidoreductase, 2Fe-2S subunit 1051898 petA 7410831 petA Campylobacter lari RM2100 ubiquinol cytochrome c oxidoreductase, 2Fe-2S subunit YP_002575670.1 1051395 R 306263 CDS YP_002575671.1 222824097 7410832 complement(1052065..1053918) 1 NC_012039.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 1053918 gidA 7410832 gidA Campylobacter lari RM2100 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA YP_002575671.1 1052065 R 306263 CDS YP_002575672.1 222824098 7410833 1054042..1054650 1 NC_012039.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 1054650 ribE 7410833 ribE Campylobacter lari RM2100 riboflavin synthase subunit alpha YP_002575672.1 1054042 D 306263 CDS YP_002575673.1 222824099 7410834 1054614..1055294 1 NC_012039.1 Pfam match to PF02578.6 DUF152; hypothetical protein 1055294 7410834 Cla_1100 Campylobacter lari RM2100 hypothetical protein YP_002575673.1 1054614 D 306263 CDS YP_002575674.1 222824100 7410835 1055287..1055493 1 NC_012039.1 hypothetical protein 1055493 7410835 Cla_1101 Campylobacter lari RM2100 hypothetical protein YP_002575674.1 1055287 D 306263 CDS YP_002575675.1 222824101 7410836 complement(1055496..1056719) 1 NC_012039.1 Pfam matches to PF00512.16 HisKA, and to PF02518.17 HATPase_c; two-component sensor histidine kinase 1056719 7410836 Cla_1102 Campylobacter lari RM2100 two-component sensor histidine kinase YP_002575675.1 1055496 R 306263 CDS YP_002575676.1 222824102 7410837 complement(1056712..1057377) 1 NC_012039.1 Pfam matches to PF00072.15 Response_reg, and to PF00486.19 Trans_reg_C; two-component response regulator 1057377 7410837 Cla_1103 Campylobacter lari RM2100 two-component response regulator YP_002575676.1 1056712 R 306263 CDS YP_002575677.1 222824103 7410838 1057514..1057810 1 NC_012039.1 non-heme iron protein, hemerythrin family 1057810 7410838 Cla_1104 Campylobacter lari RM2100 non-heme iron protein, hemerythrin family YP_002575677.1 1057514 D 306263 CDS YP_002575678.1 222824104 7410839 1057878..1058102 1 NC_012039.1 non-heme iron protein, hemerythrin family 1058102 7410839 Cla_1105 Campylobacter lari RM2100 non-heme iron protein, hemerythrin family YP_002575678.1 1057878 D 306263 CDS YP_002575679.1 222824105 7410840 1058170..1058733 1 NC_012039.1 non-heme iron protein, hemerythrin family 1058733 7410840 Cla_1106 Campylobacter lari RM2100 non-heme iron protein, hemerythrin family YP_002575679.1 1058170 D 306263 CDS YP_002575680.1 222824106 7410841 1058744..1058965 1 NC_012039.1 Pfam match to PF01402.12 RHH_1; ribbon-helix-helix protein, copG family 1058965 7410841 Cla_1107 Campylobacter lari RM2100 ribbon-helix-helix protein, copG family YP_002575680.1 1058744 D 306263 CDS YP_002575681.1 222824107 7410842 1059341..1060618 1 NC_012039.1 Pfam match to PF05538.2 Campylo_MOMP; major outer membrane protein 1060618 porA2 7410842 porA2 Campylobacter lari RM2100 major outer membrane protein YP_002575681.1 1059341 D 306263 CDS YP_002575682.1 222824108 7410843 1060908..1061345 1 NC_012039.1 Pfam match to PF00034.12 Cytochrom_C; cytochrome c family protein 1061345 7410843 Cla_1109 Campylobacter lari RM2100 cytochrome c family protein YP_002575682.1 1060908 D 306263 CDS YP_002575683.1 222824109 7410844 1061363..1062475 1 NC_012039.1 Pfam match to PF01094.19 ANF_receptor; branched-chain amino-acid ABC transporter, periplasmic binding protein 1062475 livJ 7410844 livJ Campylobacter lari RM2100 branched-chain amino-acid ABC transporter, periplasmic binding protein YP_002575683.1 1061363 D 306263 CDS YP_002575684.1 222824110 7410845 1062486..1063601 1 NC_012039.1 Pfam match to PF01094.19 ANF_receptor; branched-chain amino-acid ABC transporter, periplasmic binding protein 1063601 livK 7410845 livK Campylobacter lari RM2100 branched-chain amino-acid ABC transporter, periplasmic binding protein YP_002575684.1 1062486 D 306263 CDS YP_002575685.1 222824111 7410846 1063622..1064518 1 NC_012039.1 Pfam match to PF02653.7 BPD_transp_2; branched-chain amino acid ABC transporter permease 1064518 livH 7410846 livH Campylobacter lari RM2100 branched-chain amino acid ABC transporter permease YP_002575685.1 1063622 D 306263 CDS YP_002575686.1 222824112 7410847 1064520..1065551 1 NC_012039.1 Pfam match to PF02653.7 BPD_transp_2; branched-chain amino-acid ABC transporter permease 1065551 livM 7410847 livM Campylobacter lari RM2100 branched-chain amino-acid ABC transporter permease YP_002575686.1 1064520 D 306263 CDS YP_002575687.1 222824113 7410848 1065548..1066318 1 NC_012039.1 Pfam match to PF00005.18 ABC_tran; branched-chain amino acid ABC transporter, ATP-binding protein 1066318 livG 7410848 livG Campylobacter lari RM2100 branched-chain amino acid ABC transporter, ATP-binding protein YP_002575687.1 1065548 D 306263 CDS YP_002575688.1 222824114 7410849 1066305..1067000 1 NC_012039.1 Pfam match to PF00005.18 ABC_tran; branched-chain amino acid ABC transporter, ATP-binding protein 1067000 livF 7410849 livF Campylobacter lari RM2100 branched-chain amino acid ABC transporter, ATP-binding protein YP_002575688.1 1066305 D 306263 CDS YP_002575689.1 222824115 7410850 1067004..1070234 1 NC_012039.1 Pfam match to PF01578.11 Cytochrom_C_asm; cytochrome c biogenesis protein, CcmF/CycK/CcsA family 1070234 7410850 Cla_1116 Campylobacter lari RM2100 cytochrome c biogenesis protein, CcmF/CycK/CcsA family YP_002575689.1 1067004 D 306263 CDS YP_002575690.1 222824116 7410851 1070246..1070671 1 NC_012039.1 hypothetical protein 1070671 7410851 Cla_1117 Campylobacter lari RM2100 hypothetical protein YP_002575690.1 1070246 D 306263 CDS YP_002575691.1 222824117 7410852 1070681..1072471 1 NC_012039.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1072471 lepA 7410852 lepA Campylobacter lari RM2100 GTP-binding protein LepA YP_002575691.1 1070681 D 306263 CDS YP_002575692.1 222824118 7410853 complement(1072501..1073121) 1 NC_012039.1 hypothetical protein 1073121 7410853 Cla_1119 Campylobacter lari RM2100 hypothetical protein YP_002575692.1 1072501 R 306263 CDS YP_002575693.1 222824119 7410854 1073390..1074724 1 NC_012039.1 Pfam matches to PF01554.9 MatE, and to PF01554.9 MatE; MATE efflux family protein 1074724 7410854 Cla_1120 Campylobacter lari RM2100 MATE efflux family protein YP_002575693.1 1073390 D 306263 CDS YP_002575694.1 222824120 7410855 complement(1074705..1075343) 1 NC_012039.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 1075343 hemD 7410855 hemD Campylobacter lari RM2100 uroporphyrinogen-III synthase YP_002575694.1 1074705 R 306263 CDS YP_002575695.1 222824121 7410856 complement(1075343..1075969) 1 NC_012039.1 Pfam match to PF02581.8 TMP-TENI; thiamine-phosphate pyrophosphorylase 1075969 thiE 7410856 thiE Campylobacter lari RM2100 thiamine-phosphate pyrophosphorylase YP_002575695.1 1075343 R 306263 CDS YP_002575696.1 222824122 7410857 complement(1075956..1076738) 1 NC_012039.1 Pfam match to PF02110.6 HK; hydroxyethylthiazole kinase 1076738 thiM 7410857 thiM Campylobacter lari RM2100 hydroxyethylthiazole kinase YP_002575696.1 1075956 R 306263 CDS YP_002575697.1 222824123 7410858 complement(1076742..1077554) 1 NC_012039.1 Pfam match to PF08543.3 Phos_pyr_kin; phosphomethylpyrimidine kinase 1077554 thiD 7410858 thiD Campylobacter lari RM2100 phosphomethylpyrimidine kinase YP_002575697.1 1076742 R 306263 CDS YP_002575698.1 222824124 7410859 1077759..1078223 1 NC_012039.1 Pfam match to PF01451.12 LMWPc; low molecular weight phosphotyrosine protein phosphatase 1078223 7410859 Cla_1125 Campylobacter lari RM2100 low molecular weight phosphotyrosine protein phosphatase YP_002575698.1 1077759 D 306263 CDS YP_002575699.1 222824125 7410860 complement(1078406..1078768) 1 NC_012039.1 hypothetical protein 1078768 7410860 Cla_1126 Campylobacter lari RM2100 hypothetical protein YP_002575699.1 1078406 R 306263 CDS YP_002575700.1 222824126 7410861 complement(1078762..1079355) 1 NC_012039.1 Pfam match to PF02527.6 GidB; glucose inhibited division protein B 1079355 gidB 7410861 gidB Campylobacter lari RM2100 glucose inhibited division protein B YP_002575700.1 1078762 R 306263 CDS YP_002575701.1 222824127 7410862 complement(1079352..1079912) 1 NC_012039.1 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 1079912 ribA 7410862 ribA Campylobacter lari RM2100 GTP cyclohydrolase II YP_002575701.1 1079352 R 306263 CDS YP_002575702.1 222824128 7410863 1079982..1080962 1 NC_012039.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1080962 hemB 7410863 hemB Campylobacter lari RM2100 delta-aminolevulinic acid dehydratase YP_002575702.1 1079982 D 306263 CDS YP_002575703.1 222824129 7410864 1080965..1081450 1 NC_012039.1 hypothetical protein 1081450 7410864 Cla_1130 Campylobacter lari RM2100 hypothetical protein YP_002575703.1 1080965 D 306263 CDS YP_002575704.1 222824130 7410865 1081437..1082792 1 NC_012039.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1082792 hemN 7410865 hemN Campylobacter lari RM2100 coproporphyrinogen III oxidase YP_002575704.1 1081437 D 306263 CDS YP_002575705.1 222824131 7410866 1082794..1084062 1 NC_012039.1 Pfam matches to PF02754.7 CCG, and to PF02754.7 CCG; iron-sulfur-cluster binding protein 1084062 7410866 Cla_1132 Campylobacter lari RM2100 iron-sulfur-cluster binding protein YP_002575705.1 1082794 D 306263 CDS YP_002575706.1 222824132 7410867 complement(1084066..1084275) 1 NC_012039.1 hypothetical protein 1084275 7410867 Cla_1133 Campylobacter lari RM2100 hypothetical protein YP_002575706.1 1084066 R 306263 CDS YP_002575707.1 222824133 7410868 complement(1084313..1085320) 1 NC_012039.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 1085320 alr 7410868 alr Campylobacter lari RM2100 alanine racemase YP_002575707.1 1084313 R 306263 CDS YP_002575708.1 222824134 7410869 complement(1085320..1086291) 1 NC_012039.1 hypothetical protein 1086291 7410869 Cla_1135 Campylobacter lari RM2100 hypothetical protein YP_002575708.1 1085320 R 306263 CDS YP_002575709.1 222824135 7410870 1086419..1086838 1 NC_012039.1 Pfam match to PF04314.4 DUF461; hypothetical protein 1086838 7410870 Cla_1136 Campylobacter lari RM2100 hypothetical protein YP_002575709.1 1086419 D 306263 CDS YP_002575710.1 222824136 7410871 1086838..1087284 1 NC_012039.1 hypothetical protein 1087284 7410871 Cla_1137 Campylobacter lari RM2100 hypothetical protein YP_002575710.1 1086838 D 306263 CDS YP_002575711.1 222824137 7410872 1087288..1087845 1 NC_012039.1 Pfam match to PF02630.5 SCO1-SenC; SCO1/SenC family protein 1087845 7410872 Cla_1138 Campylobacter lari RM2100 SCO1/SenC family protein YP_002575711.1 1087288 D 306263 CDS YP_002575712.1 222824138 7410873 complement(1087857..1089059) 1 NC_012039.1 Pfam match to PF02687.12 FtsX; hypothetical protein 1089059 7410873 Cla_1139 Campylobacter lari RM2100 hypothetical protein YP_002575712.1 1087857 R 306263 CDS YP_002575713.1 222824139 7410874 complement(1089122..1089568) 1 NC_012039.1 hypothetical protein 1089568 7410874 Cla_1140 Campylobacter lari RM2100 hypothetical protein YP_002575713.1 1089122 R 306263 CDS YP_002575714.1 222824140 7410875 complement(1089544..1090062) 1 NC_012039.1 Pfam match to PF04164.4 DUF400; hypothetical protein 1090062 7410875 Cla_1141 Campylobacter lari RM2100 hypothetical protein YP_002575714.1 1089544 R 306263 CDS YP_002575715.1 222824141 7410876 complement(1090123..1092699) 1 NC_012039.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 1092699 gyrA 7410876 gyrA Campylobacter lari RM2100 DNA gyrase subunit A YP_002575715.1 1090123 R 306263 CDS YP_002575716.1 222824142 7410877 complement(1092736..1093308) 1 NC_012039.1 purine/pyrimidine phosphoribosyltransferase 1093308 7410877 Cla_1143 Campylobacter lari RM2100 purine/pyrimidine phosphoribosyltransferase YP_002575716.1 1092736 R 306263 CDS YP_002575717.1 222824143 7410878 complement(1093305..1093952) 1 NC_012039.1 outer membrane liproprotein MapA 1093952 mapA 7410878 mapA Campylobacter lari RM2100 outer membrane liproprotein MapA YP_002575717.1 1093305 R 306263 CDS YP_002575718.1 222824144 7410879 1094158..1095519 1 NC_012039.1 Pfam match to PF00939.10 Na_sulph_symp; sodium/sulfate transporter 1095519 7410879 Cla_1145 Campylobacter lari RM2100 sodium/sulfate transporter YP_002575718.1 1094158 D 306263 CDS YP_002575719.1 222824145 7410880 complement(1095550..1096152) 1 NC_012039.1 Pfam match to PF02581.8 TMP-TENI; thiamine-phosphate pyrophosphorylase/regulatory protein TenI 1096152 7410880 Cla_1146 Campylobacter lari RM2100 thiamine-phosphate pyrophosphorylase/regulatory protein TenI YP_002575719.1 1095550 R 306263 CDS YP_002575720.1 222824146 7410881 complement(1096142..1097275) 1 NC_012039.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; thiamine biosynthesis protein ThiH 1097275 thiH 7410881 thiH Campylobacter lari RM2100 thiamine biosynthesis protein ThiH YP_002575720.1 1096142 R 306263 CDS YP_002575721.1 222824147 7410882 complement(1097277..1098035) 1 NC_012039.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 1098035 thiG 7410882 thiG Campylobacter lari RM2100 thiazole synthase YP_002575721.1 1097277 R 306263 CDS YP_002575722.1 222824148 7410883 complement(1098035..1098832) 1 NC_012039.1 catalyzes the adenylation of ThiS which is involved in the formation of 5-methyl-4-(beta-hydroxyethyl)thiazole phosphate; thiamine biosynthesis protein ThiF 1098832 thiF 7410883 thiF Campylobacter lari RM2100 thiamine biosynthesis protein ThiF YP_002575722.1 1098035 R 306263 CDS YP_002575723.1 222824149 7410314 complement(1098832..1099023) 1 NC_012039.1 Pfam match to PF02597.11 ThiS; thiamine biosynthesis protein ThiS 1099023 thiS 7410314 thiS Campylobacter lari RM2100 thiamine biosynthesis protein ThiS YP_002575723.1 1098832 R 306263 CDS YP_002575724.1 222824150 7410315 complement(1099057..1099815) 1 NC_012039.1 hypothetical protein 1099815 7410315 Cla_1151 Campylobacter lari RM2100 hypothetical protein YP_002575724.1 1099057 R 306263 CDS YP_002575725.1 222824151 7410316 complement(1099950..1101050) 1 NC_012039.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 1101050 dapE 7410316 dapE Campylobacter lari RM2100 succinyl-diaminopimelate desuccinylase YP_002575725.1 1099950 R 306263 CDS YP_002575726.1 222824152 7410317 complement(1101054..1101647) 1 NC_012039.1 Pfam match to PF01810.9 LysE; hypothetical protein 1101647 7410317 Cla_1153 Campylobacter lari RM2100 hypothetical protein YP_002575726.1 1101054 R 306263 CDS YP_002575727.1 222824153 7410318 complement(1101641..1102339) 1 NC_012039.1 Pfam match to PF02146.8 SIR2; NAD-dependent deacetylase 1102339 7410318 Cla_1154 Campylobacter lari RM2100 NAD-dependent deacetylase YP_002575727.1 1101641 R 306263 CDS YP_002575728.1 222824154 7410319 complement(1102348..1104543) 1 NC_012039.1 MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein 1104543 mutS 7410319 mutS Campylobacter lari RM2100 recombination and DNA strand exchange inhibitor protein YP_002575728.1 1102348 R 306263 CDS YP_002575729.1 222824155 7410320 complement(1104543..1104890) 1 NC_012039.1 hypothetical protein 1104890 7410320 Cla_1156 Campylobacter lari RM2100 hypothetical protein YP_002575729.1 1104543 R 306263 CDS YP_002575730.1 222824156 7410321 complement(1104883..1106175) 1 NC_012039.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 1106175 murC 7410321 murC Campylobacter lari RM2100 UDP-N-acetylmuramate--L-alanine ligase YP_002575730.1 1104883 R 306263 CDS YP_002575731.1 222824157 7410322 complement(1106184..1106975) 1 NC_012039.1 hydrolase, carbon-nitrogen family 1106975 7410322 Cla_1158 Campylobacter lari RM2100 hydrolase, carbon-nitrogen family YP_002575731.1 1106184 R 306263 CDS YP_002575732.1 222824158 7410323 complement(1107141..1108592) 1 NC_012039.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 1108592 guaB 7410323 guaB Campylobacter lari RM2100 inosine 5'-monophosphate dehydrogenase YP_002575732.1 1107141 R 306263 CDS YP_002575733.1 222824159 7410324 complement(1108603..1109967) 1 NC_012039.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 1109967 gatA 7410324 gatA Campylobacter lari RM2100 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_002575733.1 1108603 R 306263 CDS YP_002575734.1 222824160 7410325 complement(1110067..1112832) 1 NC_012039.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 1112832 ileS 7410325 ileS Campylobacter lari RM2100 isoleucyl-tRNA synthetase YP_002575734.1 1110067 R 306263 CDS YP_002575735.1 222824161 7410326 1112933..1114024 1 NC_012039.1 Pfam match to PF02464.8 CinA; competence/damage-inducible protein, CinA family 1114024 7410326 Cla_1162 Campylobacter lari RM2100 competence/damage-inducible protein, CinA family YP_002575735.1 1112933 D 306263 CDS YP_002575736.1 222824162 7410327 complement(1114071..1114568) 1 NC_012039.1 lipoprotein thioredoxin 1114568 7410327 Cla_1163 Campylobacter lari RM2100 lipoprotein thioredoxin YP_002575736.1 1114071 R 306263 CDS YP_002575737.1 222824163 7410328 complement(1114529..1115020) 1 NC_012039.1 Pfam match to PF08534.1 Redoxin; lipoprotein thioredoxin 1115020 7410328 Cla_1164 Campylobacter lari RM2100 lipoprotein thioredoxin YP_002575737.1 1114529 R 306263 CDS YP_002575738.1 222824164 7410329 complement(1115010..1115666) 1 NC_012039.1 Pfam match to PF00005.18 ABC_tran; ABC transporter ATP-binding protein 1115666 7410329 Cla_1165 Campylobacter lari RM2100 ABC transporter ATP-binding protein YP_002575738.1 1115010 R 306263 CDS YP_002575739.1 222824165 7410330 complement(1115666..1116781) 1 NC_012039.1 Pfam match to PF02687.12 FtsX; ABC transporter permease 1116781 7410330 Cla_1166 Campylobacter lari RM2100 ABC transporter permease YP_002575739.1 1115666 R 306263 CDS YP_002575740.1 222824166 7410331 complement(1116771..1118063) 1 NC_012039.1 Pfam match to PF02687.12 FtsX; ABC transporter permease 1118063 7410331 Cla_1167 Campylobacter lari RM2100 ABC transporter permease YP_002575740.1 1116771 R 306263 CDS YP_002575741.1 222824167 7410332 complement(1118053..1119474) 1 NC_012039.1 Pfam match to PF04945.4 YHS; hypothetical protein 1119474 7410332 Cla_1168 Campylobacter lari RM2100 hypothetical protein YP_002575741.1 1118053 R 306263 CDS YP_002575742.1 222824168 7410333 complement(1119551..1120072) 1 NC_012039.1 hypothetical protein 1120072 p19 7410333 p19 Campylobacter lari RM2100 hypothetical protein YP_002575742.1 1119551 R 306263 CDS YP_002575743.1 222824169 7410334 complement(1120069..1122144) 1 NC_012039.1 Pfam match to PF03239.5 FTR1; iron permease 1122144 7410334 Cla_1170 Campylobacter lari RM2100 iron permease YP_002575743.1 1120069 R 306263 CDS YP_002575744.1 222824170 7410335 complement(1122815..1123672) 1 NC_012039.1 Pfam match to PF01063.10 Aminotran_4; D-amino acid aminotransferase 1123672 7410335 Cla_1171 Campylobacter lari RM2100 D-amino acid aminotransferase YP_002575744.1 1122815 R 306263 CDS YP_002575745.1 222824171 7410336 complement(1123684..1124661) 1 NC_012039.1 lipopolysaccharide core biosynthesis protein 1124661 7410336 Cla_1172 Campylobacter lari RM2100 lipopolysaccharide core biosynthesis protein YP_002575745.1 1123684 R 306263 CDS YP_002575746.1 222824172 7410337 1124791..1125282 1 NC_012039.1 hypothetical protein 1125282 7410337 Cla_1173 Campylobacter lari RM2100 hypothetical protein YP_002575746.1 1124791 D 306263 CDS YP_002575747.1 222824173 7410338 complement(1125279..1126193) 1 NC_012039.1 hypothetical protein 1126193 7410338 Cla_1174 Campylobacter lari RM2100 hypothetical protein YP_002575747.1 1125279 R 306263 CDS YP_002575748.1 222824174 7410339 complement(1126197..1127114) 1 NC_012039.1 Pfam match to PF01795.10 Methyltransf_5; S-adenosyl-methyltransferase MraW 1127114 mraW 7410339 mraW Campylobacter lari RM2100 S-adenosyl-methyltransferase MraW YP_002575748.1 1126197 R 306263 CDS YP_002575749.1 222824175 7410340 1127176..1127754 1 NC_012039.1 hypothetical protein 1127754 7410340 Cla_1176 Campylobacter lari RM2100 hypothetical protein YP_002575749.1 1127176 D 306263 CDS YP_002575750.1 222824176 7410341 1127834..1129312 1 NC_012039.1 peptidyl-prolyl cis-trans isomerase D 1129312 7410341 Cla_1177 Campylobacter lari RM2100 peptidyl-prolyl cis-trans isomerase D YP_002575750.1 1127834 D 306263 CDS YP_002575751.1 222824177 7410342 1129309..1130688 1 NC_012039.1 Pfam matches to PF02491.11 FtsA, and to PF02491.11 FtsA; cell division protein FtsA 1130688 ftsA 7410342 ftsA Campylobacter lari RM2100 cell division protein FtsA YP_002575751.1 1129309 D 306263 CDS YP_002575752.1 222824178 7410343 1130700..1131806 1 NC_012039.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 1131806 ftsZ 7410343 ftsZ Campylobacter lari RM2100 cell division protein FtsZ YP_002575752.1 1130700 D 306263 CDS YP_002575753.1 222824179 7410344 1131827..1133203 1 NC_012039.1 Pfam match to PF04095.7 NAPRTase; nicotinate phosphoribosyltransferase 1133203 pncB 7410344 pncB Campylobacter lari RM2100 nicotinate phosphoribosyltransferase YP_002575753.1 1131827 D 306263 CDS YP_002575754.1 222824180 7410345 complement(1133187..1134257) 1 NC_012039.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1134257 ispG 7410345 ispG Campylobacter lari RM2100 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_002575754.1 1133187 R 306263 CDS YP_002575755.1 222824181 7410346 complement(1134314..1136158) 1 NC_012039.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 1136158 priA 7410346 priA Campylobacter lari RM2100 primosome assembly protein PriA YP_002575755.1 1134314 R 306263 CDS YP_002575756.1 222824182 7410347 complement(1136155..1136625) 1 NC_012039.1 Pfam match to PF07963.3 N_methyl; N-terminal methylation domain protein 1136625 7410347 Cla_1183 Campylobacter lari RM2100 N-terminal methylation domain protein YP_002575756.1 1136155 R 306263 CDS YP_002575757.1 222824183 7410348 complement(1136626..1136865) 1 NC_012039.1 hypothetical protein 1136865 7410348 Cla_1184 Campylobacter lari RM2100 hypothetical protein YP_002575757.1 1136626 R 306263 CDS YP_002575758.1 222824184 7410349 complement(1136852..1137085) 1 NC_012039.1 hypothetical protein 1137085 7410349 Cla_1185 Campylobacter lari RM2100 hypothetical protein YP_002575758.1 1136852 R 306263 CDS YP_002575759.1 222824185 7410350 1137240..1139213 1 NC_012039.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1139213 uvrB 7410350 uvrB Campylobacter lari RM2100 excinuclease ABC subunit B YP_002575759.1 1137240 D 306263 CDS YP_002575760.1 222824186 7410351 complement(1139231..1139800) 1 NC_012039.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 1139800 efp 7410351 efp Campylobacter lari RM2100 elongation factor P YP_002575760.1 1139231 R 306263 CDS YP_002575761.1 222824187 7410352 complement(1139861..1141441) 1 NC_012039.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 1141441 serA 7410352 serA Campylobacter lari RM2100 D-3-phosphoglycerate dehydrogenase YP_002575761.1 1139861 R 306263 CDS YP_002575762.1 222824188 7410353 complement(1141438..1141917) 1 NC_012039.1 hypothetical protein 1141917 7410353 Cla_1189 Campylobacter lari RM2100 hypothetical protein YP_002575762.1 1141438 R 306263 CDS YP_002575763.1 222824189 7410354 complement(1142038..1143591) 1 NC_012039.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1143591 rpsA 7410354 rpsA Campylobacter lari RM2100 30S ribosomal protein S1 YP_002575763.1 1142038 R 306263 CDS YP_002575764.1 222824190 7410355 complement(1143647..1144483) 1 NC_012039.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1144483 ispH 7410355 ispH Campylobacter lari RM2100 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_002575764.1 1143647 R 306263 CDS YP_002575765.1 222824191 7410356 complement(1144473..1145759) 1 NC_012039.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1145759 aroA 7410356 aroA Campylobacter lari RM2100 3-phosphoshikimate 1-carboxyvinyltransferase YP_002575765.1 1144473 R 306263 CDS YP_002575766.1 222824192 7410357 complement(1145756..1148086) 1 NC_012039.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1148086 pheT 7410357 pheT Campylobacter lari RM2100 phenylalanyl-tRNA synthetase subunit beta YP_002575766.1 1145756 R 306263 CDS YP_002575767.1 222824193 7410358 complement(1148083..1149075) 1 NC_012039.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1149075 pheS 7410358 pheS Campylobacter lari RM2100 phenylalanyl-tRNA synthetase subunit alpha YP_002575767.1 1148083 R 306263 CDS YP_002575768.1 222824194 7410359 1149160..1149525 1 NC_012039.1 Pfam match to PF01230.14 HIT; HIT family hydrolase 1149525 7410359 Cla_1195 Campylobacter lari RM2100 HIT family hydrolase YP_002575768.1 1149160 D 306263 CDS YP_002575769.1 222824195 7410360 complement(1149543..1151117) 1 NC_012039.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 1151117 pckA 7410360 pckA Campylobacter lari RM2100 phosphoenolpyruvate carboxykinase YP_002575769.1 1149543 R 306263 CDS YP_002575770.1 222824196 7410361 complement(1151128..1152906) 1 NC_012039.1 Pfam matches to PF00682.10 HMGL-like, and to PF00364.13 Biotin_lipoyl; pyruvate carboxylase, subunit B 1152906 pycB 7410361 pycB Campylobacter lari RM2100 pyruvate carboxylase, subunit B YP_002575770.1 1151128 R 306263 CDS YP_002575771.1 222824197 7410362 complement(1152965..1154299) 1 NC_012039.1 Pfam match to PF00209.9 SNF; sodium- and chloride-dependent transporter, SNF family 1154299 7410362 Cla_1198 Campylobacter lari RM2100 sodium- and chloride-dependent transporter, SNF family YP_002575771.1 1152965 R 306263 CDS YP_002575772.1 222824198 7410363 complement(1154309..1155646) 1 NC_012039.1 Pfam match to PF00209.9 SNF; sodium- and chloride-dependent transporter, SNF family 1155646 7410363 Cla_1199 Campylobacter lari RM2100 sodium- and chloride-dependent transporter, SNF family YP_002575772.1 1154309 R 306263 CDS YP_002575773.1 222824199 7410364 complement(1155656..1157008) 1 NC_012039.1 Pfam match to PF00209.9 SNF; sodium- and chloride-dependent transporter, SNF family 1157008 7410364 Cla_1200 Campylobacter lari RM2100 sodium- and chloride-dependent transporter, SNF family YP_002575773.1 1155656 R 306263 CDS YP_002575774.1 222824200 7410365 1157204..1157527 1 NC_012039.1 Pfam match to PF00137.12 ATP-synt_C; ATP synthase F0 subunit C 1157527 atpE 7410365 atpE Campylobacter lari RM2100 ATP synthase F0 subunit C YP_002575774.1 1157204 D 306263 CDS YP_002575775.1 222824201 7410367 1157664..1158104 1 NC_012039.1 hypothetical protein 1158104 7410367 Cla_1203 Campylobacter lari RM2100 hypothetical protein YP_002575775.1 1157664 D 306263 CDS YP_002575776.1 222824202 7410368 1158165..1159460 1 NC_012039.1 Pfam matches to PF08447.2 PAS_3, and to PF08447.2 PAS_3; MCP-domain signal transduction protein 1159460 7410368 Cla_1204 Campylobacter lari RM2100 MCP-domain signal transduction protein YP_002575776.1 1158165 D 306263 CDS YP_002575777.1 222824203 7410369 complement(1159479..1160636) 1 NC_012039.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 1160636 pyrC2 7410369 pyrC2 Campylobacter lari RM2100 dihydroorotase YP_002575777.1 1159479 R 306263 CDS YP_002575778.1 222824204 7410370 complement(1160633..1161535) 1 NC_012039.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1161535 gpsA 7410370 gpsA Campylobacter lari RM2100 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_002575778.1 1160633 R 306263 CDS YP_002575779.1 222824205 7410371 complement(1161538..1162956) 1 NC_012039.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 1162956 gatB 7410371 gatB Campylobacter lari RM2100 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_002575779.1 1161538 R 306263 CDS YP_002575780.1 222824206 7410372 complement(1163081..1163761) 1 NC_012039.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A 1163761 atpB 7410372 atpB Campylobacter lari RM2100 ATP synthase F0F1 subunit A YP_002575780.1 1163081 R 306263 CDS YP_002575781.1 222824207 7410373 complement(1163824..1165332) 1 NC_012039.1 FAD-binding domain protein 1165332 7410373 Cla_1209 Campylobacter lari RM2100 FAD-binding domain protein YP_002575781.1 1163824 R 306263 CDS YP_002575782.1 222824208 7410374 complement(1165323..1166663) 1 NC_012039.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 1166663 radA 7410374 radA Campylobacter lari RM2100 DNA repair protein RadA YP_002575782.1 1165323 R 306263 CDS YP_002575783.1 222824209 7410375 complement(1166663..1167529) 1 NC_012039.1 Pfam match to PF00448.13 SRP54; signal recognition particle-docking GTPase FtsY 1167529 ftsY 7410375 ftsY Campylobacter lari RM2100 signal recognition particle-docking GTPase FtsY YP_002575783.1 1166663 R 306263 CDS YP_002575784.1 222824210 7410376 complement(1167529..1168074) 1 NC_012039.1 Pfam match to PF00578.12 AhpC-TSA; hypothetical protein 1168074 7410376 Cla_1212 Campylobacter lari RM2100 hypothetical protein YP_002575784.1 1167529 R 306263 CDS YP_002575785.1 222824211 7410377 1168142..1168771 1 NC_012039.1 Pfam match to PF01812.11 5-FTHF_cyc-lig; 5-formyltetrahydrofolate cyclo-ligase 1168771 7410377 Cla_1213 Campylobacter lari RM2100 5-formyltetrahydrofolate cyclo-ligase YP_002575785.1 1168142 D 306263 CDS YP_002575786.1 222824212 7410378 1168695..1170248 1 NC_012039.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 1170248 7410378 Cla_1214 Campylobacter lari RM2100 phosphodiesterase YP_002575786.1 1168695 D 306263 CDS YP_002575787.1 222824213 7410379 1170257..1170820 1 NC_012039.1 Pfam match to PF09335.2 SNARE_assoc; hypothetical protein 1170820 7410379 Cla_1215 Campylobacter lari RM2100 hypothetical protein YP_002575787.1 1170257 D 306263 CDS YP_002575788.1 222824214 7410380 1170817..1172073 1 NC_012039.1 Pfam match to PF03772.7 Competence; ComEC/Rec2-related protein domain protein 1172073 7410380 Cla_1216 Campylobacter lari RM2100 ComEC/Rec2-related protein domain protein YP_002575788.1 1170817 D 306263 CDS YP_002575789.1 222824215 7410381 complement(1172020..1172832) 1 NC_012039.1 Pfam match to PF03631.6 Ribonuclease_BN; tRNA-processing ribonuclease BN 1172832 rbn 7410381 rbn Campylobacter lari RM2100 tRNA-processing ribonuclease BN YP_002575789.1 1172020 R 306263 CDS YP_002575790.1 222824216 7410382 complement(1172832..1174214) 1 NC_012039.1 Pfam matches to PF01565.14 FAD_binding_4, and to PF02913.10 FAD-oxidase_C; glycolate oxidase 1174214 glcD 7410382 glcD Campylobacter lari RM2100 glycolate oxidase YP_002575790.1 1172832 R 306263 CDS YP_002575791.1 222824217 7410383 complement(1174214..1174933) 1 NC_012039.1 hypothetical protein 1174933 7410383 Cla_1219 Campylobacter lari RM2100 hypothetical protein YP_002575791.1 1174214 R 306263 CDS YP_002575792.1 222824218 7410384 1175052..1176209 1 NC_012039.1 Pfam match to PF01551.13 Peptidase_M23; peptidase, M23/M37 family 1176209 7410384 Cla_1220 Campylobacter lari RM2100 peptidase, M23/M37 family YP_002575792.1 1175052 D 306263 CDS YP_002575793.1 222824219 7410385 1176211..1177554 1 NC_012039.1 Pfam matches to PF00571.19 CBS, and to PF01769.7 MgtE; Mg/Co/Ni transporter, MgtE family 1177554 7410385 Cla_1221 Campylobacter lari RM2100 Mg/Co/Ni transporter, MgtE family YP_002575793.1 1176211 D 306263 CDS YP_002575794.1 222824220 7410386 1177566..1178084 1 NC_012039.1 Pfam match to PF08534.1 Redoxin; thiol peroxidase 1178084 tpx2 7410386 tpx2 Campylobacter lari RM2100 thiol peroxidase YP_002575794.1 1177566 D 306263 CDS YP_002575795.1 222824221 7410387 complement(1178081..1179466) 1 NC_012039.1 unwinds double stranded DNA; replicative DNA helicase 1179466 dnaB 7410387 dnaB Campylobacter lari RM2100 replicative DNA helicase YP_002575795.1 1178081 R 306263 CDS YP_002575796.1 222824222 7410388 complement(1179479..1180381) 1 NC_012039.1 Pfam match to PF00291.16 PALP; cysteine synthase A 1180381 cysK 7410388 cysK Campylobacter lari RM2100 cysteine synthase A YP_002575796.1 1179479 R 306263 CDS YP_002575797.1 222824223 7410389 complement(1180477..1180779) 1 NC_012039.1 Pfam match to PF00216.12 Bac_DNA_binding; DNA-binding protein HU 1180779 hup 7410389 hup Campylobacter lari RM2100 DNA-binding protein HU YP_002575797.1 1180477 R 306263 CDS YP_002575798.1 222824224 7410390 complement(1180872..1181786) 1 NC_012039.1 Pfam match to PF01075.8 Glyco_transf_9; lipopolysaccharide heptosyltransferase II 1181786 waaF 7410390 waaF Campylobacter lari RM2100 lipopolysaccharide heptosyltransferase II YP_002575798.1 1180872 R 306263 CDS YP_002575799.1 222824225 7410391 1181835..1182647 1 NC_012039.1 Pfam match to PF00535.17 Glycos_transf_2; lipooligosaccharide biosynthesis glycosyltransferase 1182647 waaV 7410391 waaV Campylobacter lari RM2100 lipooligosaccharide biosynthesis glycosyltransferase YP_002575799.1 1181835 D 306263 CDS YP_002575800.1 222824226 7410392 complement(1182642..1183406) 1 NC_012039.1 flagellin modification protein A 1183406 ptmA 7410392 ptmA Campylobacter lari RM2100 flagellin modification protein A YP_002575800.1 1182642 R 306263 CDS YP_002575801.1 222824227 7410393 complement(1183406..1184113) 1 NC_012039.1 Pfam match to PF02348.10 CTP_transf_3; flagellin modification protein PtmB, acylneuraminate cytidylyltransferase 1184113 ptmB 7410393 ptmB Campylobacter lari RM2100 flagellin modification protein PtmB, acylneuraminate cytidylyltransferase YP_002575801.1 1183406 R 306263 CDS YP_002575802.1 222824228 7410394 complement(1184106..1184996) 1 NC_012039.1 flagellin modification protein PtmF 1184996 ptmF 7410394 ptmF Campylobacter lari RM2100 flagellin modification protein PtmF YP_002575802.1 1184106 R 306263 CDS YP_002575803.1 222824229 7410395 complement(1184993..1186030) 1 NC_012039.1 Pfam matches to PF00571.19 CBS, and to PF00483.14 NTP_transferase; flagellin modification protein PtmE, sugar-phosphate nucleotide transferase 1186030 ptmE 7410395 ptmE Campylobacter lari RM2100 flagellin modification protein PtmE, sugar-phosphate nucleotide transferase YP_002575803.1 1184993 R 306263 CDS YP_002575804.1 222824230 7410396 complement(1186041..1186712) 1 NC_012039.1 Pfam match to PF02585.8 PIG-L; LmbE-like protein 1186712 7410396 Cla_1232 Campylobacter lari RM2100 LmbE-like protein YP_002575804.1 1186041 R 306263 CDS YP_002575805.1 222824231 7410966 complement(1186722..1187615) 1 NC_012039.1 Pfam match to PF00551.10 Formyl_trans_N; formyltransferase 1187615 7410966 Cla_1233 Campylobacter lari RM2100 formyltransferase YP_002575805.1 1186722 R 306263 CDS YP_002575806.1 222824232 7410967 complement(1187612..1188784) 1 NC_012039.1 Pfam match to PF02350.10 Epimerase_2; flagellin modification protein PtmD, UDP-N-acetylglucosamine 2-epimerase 1188784 ptmD 7410967 ptmD Campylobacter lari RM2100 flagellin modification protein PtmD, UDP-N-acetylglucosamine 2-epimerase YP_002575806.1 1187612 R 306263 CDS YP_002575807.1 222824233 7410968 complement(1188777..1189781) 1 NC_012039.1 Pfam match to PF03102.5 NeuB; flagellin modification protein PtmC, N-acetylneuraminic acid synthetase 1189781 ptmC 7410968 ptmC Campylobacter lari RM2100 flagellin modification protein PtmC, N-acetylneuraminic acid synthetase YP_002575807.1 1188777 R 306263 CDS YP_002575808.1 222824234 7410969 complement(1189797..1190687) 1 NC_012039.1 Pfam match to PF00551.10 Formyl_trans_N; formyltransferase 1190687 7410969 Cla_1236 Campylobacter lari RM2100 formyltransferase YP_002575808.1 1189797 R 306263 CDS YP_002575809.1 222824235 7410970 complement(1190724..1191731) 1 NC_012039.1 Pfam match to PF01370.12 Epimerase; NAD-dependent epimerase/dehydratase 1191731 7410970 Cla_1237 Campylobacter lari RM2100 NAD-dependent epimerase/dehydratase YP_002575809.1 1190724 R 306263 CDS YP_002575810.1 222824236 7410972 1192633..1192782 1 NC_012039.1 CgtB glycosyltransferase 1192782 7410972 Cla_1239 Campylobacter lari RM2100 CgtB glycosyltransferase YP_002575810.1 1192633 D 306263 CDS YP_002575811.1 222824237 7410973 1192930..1194135 1 NC_012039.1 Pfam match to PF00535.17 Glycos_transf_2; glycosyltransferase 1194135 7410973 Cla_1240 Campylobacter lari RM2100 glycosyltransferase YP_002575811.1 1192930 D 306263 CDS YP_002575812.1 222824238 7410974 1194139..1195059 1 NC_012039.1 Pfam match to PF00535.17 Glycos_transf_2; glycosyltransferase 1195059 7410974 Cla_1241 Campylobacter lari RM2100 glycosyltransferase YP_002575812.1 1194139 D 306263 CDS YP_002575813.1 222824239 7410975 complement(1195049..1196218) 1 NC_012039.1 Pfam match to PF00535.17 Glycos_transf_2; glycosyltransferase 1196218 7410975 Cla_1242 Campylobacter lari RM2100 glycosyltransferase YP_002575813.1 1195049 R 306263 CDS YP_002575814.1 222824240 7410976 1196278..1197273 1 NC_012039.1 Pfam match to PF05704.3 Caps_synth; glycosyltransferase 1197273 7410976 Cla_1243 Campylobacter lari RM2100 glycosyltransferase YP_002575814.1 1196278 D 306263 CDS YP_002575815.1 222824241 7410977 complement(1197276..1198430) 1 NC_012039.1 Pfam match to PF00535.17 Glycos_transf_2; glycosyltransferase 1198430 7410977 Cla_1244 Campylobacter lari RM2100 glycosyltransferase YP_002575815.1 1197276 R 306263 CDS YP_002575816.1 222824242 7410978 complement(1198434..1199981) 1 NC_012039.1 Pfam matches to PF00535.17 Glycos_transf_2, and to PF00535.17 Glycos_transf_2; two-domain glycosyltransferase 1199981 7410978 Cla_1245 Campylobacter lari RM2100 two-domain glycosyltransferase YP_002575816.1 1198434 R 306263 CDS YP_002575817.1 222824243 7410979 complement(1199990..1200862) 1 NC_012039.1 acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; essential for survival; plays a role in cell responses to environmental changes; lipid A biosynthesis lauroyl acyltransferase 1200862 htrB 7410979 htrB Campylobacter lari RM2100 lipid A biosynthesis lauroyl acyltransferase YP_002575817.1 1199990 R 306263 CDS YP_002575818.1 222824244 7410980 complement(1200859..1201878) 1 NC_012039.1 Pfam match to PF01075.8 Glyco_transf_9; lipopolysaccharide heptosyltransferase I 1201878 waaC 7410980 waaC Campylobacter lari RM2100 lipopolysaccharide heptosyltransferase I YP_002575818.1 1200859 R 306263 CDS YP_002575819.1 222824245 7410981 1201944..1202723 1 NC_012039.1 polysaccharide biosynthesis protein 1202723 wlaX 7410981 wlaX Campylobacter lari RM2100 polysaccharide biosynthesis protein YP_002575819.1 1201944 D 306263 CDS YP_002575820.1 222824246 7410982 1202782..1203768 1 NC_012039.1 Pfam match to PF01370.12 Epimerase; UDP-glucose 4-epimerase 1203768 galE 7410982 galE Campylobacter lari RM2100 UDP-glucose 4-epimerase YP_002575820.1 1202782 D 306263 CDS YP_002575821.1 222824247 7410983 1203762..1205456 1 NC_012039.1 Pfam match to PF00005.18 ABC_tran; ABC transporter, ATP-binding protein/permease, glycan transport 1205456 pglK 7410983 pglK Campylobacter lari RM2100 ABC transporter, ATP-binding protein/permease, glycan transport YP_002575821.1 1203762 D 306263 CDS YP_002575822.1 222824248 7410984 1205453..1206517 1 NC_012039.1 Pfam match to PF00534.11 Glycos_transf_1; GalNAc alpha-1,4-transferase 1206517 pglH 7410984 pglH Campylobacter lari RM2100 GalNAc alpha-1,4-transferase YP_002575822.1 1205453 D 306263 CDS YP_002575823.1 222824249 7410985 1206519..1207619 1 NC_012039.1 Pfam match to PF00534.11 Glycos_transf_1; GalNAc alpha-1,4-transferase 1207619 pglJ 7410985 pglJ Campylobacter lari RM2100 GalNAc alpha-1,4-transferase YP_002575823.1 1206519 D 306263 CDS YP_002575824.1 222824250 7410986 1207621..1209759 1 NC_012039.1 Pfam match to PF02516.5 STT3; oligosaccharide transferase to N-glycosylate proteins 1209759 pglB 7410986 pglB Campylobacter lari RM2100 oligosaccharide transferase to N-glycosylate proteins YP_002575824.1 1207621 D 306263 CDS YP_002575825.1 222824251 7410987 1209756..1210883 1 NC_012039.1 Pfam match to PF00534.11 Glycos_transf_1; GalNAc alpha-1,3-transferase 1210883 pglA 7410987 pglA Campylobacter lari RM2100 GalNAc alpha-1,3-transferase YP_002575825.1 1209756 D 306263 CDS YP_002575826.1 222824252 7410988 1210876..1211478 1 NC_012039.1 Pfam match to PF02397.7 Bac_transf; galactosyltransferase 1211478 pglC 7410988 pglC Campylobacter lari RM2100 galactosyltransferase YP_002575826.1 1210876 D 306263 CDS YP_002575827.1 222824253 7410989 1211444..1212058 1 NC_012039.1 UDP-4-amino-sugar N-acetyltransferase 1212058 pglD 7410989 pglD Campylobacter lari RM2100 UDP-4-amino-sugar N-acetyltransferase YP_002575827.1 1211444 D 306263 CDS YP_002575828.1 222824254 7410990 1212058..1213218 1 NC_012039.1 Pfam match to PF01041.8 DegT_DnrJ_EryC1; UDP-4-keto-6-deoxy-GlcNAc C4 aminotransferase 1213218 pglE 7410990 pglE Campylobacter lari RM2100 UDP-4-keto-6-deoxy-GlcNAc C4 aminotransferase YP_002575828.1 1212058 D 306263 CDS YP_002575829.1 222824255 7410991 1213220..1214983 1 NC_012039.1 Pfam match to PF02719.6 Polysacc_synt_2; UDP-GlcNAc C4,6 dehydratase 1214983 pglF 7410991 pglF Campylobacter lari RM2100 UDP-GlcNAc C4,6 dehydratase YP_002575829.1 1213220 D 306263 CDS YP_002575830.1 222824256 7410992 1215096..1215473 1 NC_012039.1 Pfam match to PF00072.15 Response_reg; chemotaxis protein CheY 1215473 cheY 7410992 cheY Campylobacter lari RM2100 chemotaxis protein CheY YP_002575830.1 1215096 D 306263 CDS YP_002575831.1 222824257 7410993 1215486..1216322 1 NC_012039.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase 1216322 prmA 7410993 prmA Campylobacter lari RM2100 ribosomal protein L11 methyltransferase YP_002575831.1 1215486 D 306263 CDS YP_002575832.1 222824258 7410994 1216322..1218244 1 NC_012039.1 Pfam matches to PF06480.6 FtsH_ext, and to PF00004.20 AAA; cell division protein FtsH 1218244 ftsH2 7410994 ftsH2 Campylobacter lari RM2100 cell division protein FtsH YP_002575832.1 1216322 D 306263 CDS YP_002575833.1 222824259 7410995 1218244..1218861 1 NC_012039.1 phosphatidylserine decarboxylase related protein 1218861 7410995 Cla_1262 Campylobacter lari RM2100 phosphatidylserine decarboxylase related protein YP_002575833.1 1218244 D 306263 CDS YP_002575834.1 222824260 7410996 1218858..1219568 1 NC_012039.1 Pfam match to PF01066.12 CDP-OH_P_transf; CDP-diacylglycerol--serine O-phosphatidyltransferase 1219568 pssA 7410996 pssA Campylobacter lari RM2100 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_002575834.1 1218858 D 306263 CDS YP_002575835.1 222824261 7410997 1219634..1220188 1 NC_012039.1 hypothetical protein 1220188 7410997 Cla_1264 Campylobacter lari RM2100 hypothetical protein YP_002575835.1 1219634 D 306263 CDS YP_002575836.1 222824262 7410999 1220340..1221806 1 NC_012039.1 Pfam match to PF00817.11 IMS; UV damage repair protein, ImpB/MucB/SamB family 1221806 7410999 Cla_1266 Campylobacter lari RM2100 UV damage repair protein, ImpB/MucB/SamB family YP_002575836.1 1220340 D 306263 CDS YP_002575837.1 222824263 7411000 1221799..1221987 1 NC_012039.1 hypothetical protein 1221987 7411000 Cla_1267 Campylobacter lari RM2100 hypothetical protein YP_002575837.1 1221799 D 306263 CDS YP_002575838.1 222824264 7411001 complement(1221991..1223826) 1 NC_012039.1 invasion antigen B 1223826 ciaB 7411001 ciaB Campylobacter lari RM2100 invasion antigen B YP_002575838.1 1221991 R 306263 CDS YP_002575839.1 222824265 7411002 1223891..1224295 1 NC_012039.1 Pfam match to PF03061.13 4HBT; acyl-CoA thioester hydrolase 1224295 7411002 Cla_1269 Campylobacter lari RM2100 acyl-CoA thioester hydrolase YP_002575839.1 1223891 D 306263 CDS YP_002575840.1 222824266 7411003 1224360..1225289 1 NC_012039.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 1225289 prsA 7411003 prsA Campylobacter lari RM2100 ribose-phosphate pyrophosphokinase YP_002575840.1 1224360 D 306263 CDS YP_002575841.1 222824267 7411004 1225409..1225630 1 NC_012039.1 hypothetical protein 1225630 7411004 Cla_1271 Campylobacter lari RM2100 hypothetical protein YP_002575841.1 1225409 D 306263 CDS YP_002575843.1 222824269 7411007 complement(1225995..1226405) 1 NC_012039.1 hypothetical protein 1226405 7411007 Cla_1274 Campylobacter lari RM2100 hypothetical protein YP_002575843.1 1225995 R 306263 CDS YP_002575844.1 222824270 7411008 1226497..1227507 1 NC_012039.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1227507 ruvB 7411008 ruvB Campylobacter lari RM2100 Holliday junction DNA helicase RuvB YP_002575844.1 1226497 D 306263 CDS YP_002575845.1 222824271 7411009 1227497..1228540 1 NC_012039.1 Pfam match to PF01594.7 UPF0118; acid membrane antigen A 1228540 amaA 7411009 amaA Campylobacter lari RM2100 acid membrane antigen A YP_002575845.1 1227497 D 306263 CDS YP_002575846.1 222824272 7411010 complement(1228547..1229848) 1 NC_012039.1 Pfam match to PF07690.7 MFS_1; major facilitator superfamily transporter 1229848 7411010 Cla_1277 Campylobacter lari RM2100 major facilitator superfamily transporter YP_002575846.1 1228547 R 306263 CDS YP_002575847.1 222824273 7411011 1229925..1230542 1 NC_012039.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 1230542 7411011 Cla_1278 Campylobacter lari RM2100 deoxyribonucleotide triphosphate pyrophosphatase YP_002575847.1 1229925 D 306263 CDS YP_002575848.1 222824274 7411012 complement(1230567..1233032) 1 NC_012039.1 Pfam match to PF02460.9 Patched; hypothetical protein 1233032 7411012 Cla_1279 Campylobacter lari RM2100 hypothetical protein YP_002575848.1 1230567 R 306263 CDS YP_002575849.1 222824275 7411013 complement(1233032..1233601) 1 NC_012039.1 Pfam match to PF05494.3 Tol_Tol_Ttg2; organic solvent tolerance protein 1233601 7411013 Cla_1280 Campylobacter lari RM2100 organic solvent tolerance protein YP_002575849.1 1233032 R 306263 CDS YP_002575850.1 222824276 7411014 complement(1233611..1234297) 1 NC_012039.1 Pfam match to PF04333.4 VacJ; VacJ family 1234297 7411014 Cla_1281 Campylobacter lari RM2100 VacJ family YP_002575850.1 1233611 R 306263 CDS YP_002575851.1 222824277 7411015 1234517..1235263 1 NC_012039.1 Pfam match to PF01547.16 SBP_bac_1; molybdenum ABC transporter, periplasmic molybdate-binding protein 1235263 modA 7411015 modA Campylobacter lari RM2100 molybdenum ABC transporter, periplasmic molybdate-binding protein YP_002575851.1 1234517 D 306263 CDS YP_002575852.1 222824278 7411016 1235260..1235649 1 NC_012039.1 hypothetical protein 1235649 7411016 Cla_1283 Campylobacter lari RM2100 hypothetical protein YP_002575852.1 1235260 D 306263 CDS YP_002575853.1 222824279 7411017 1235643..1236512 1 NC_012039.1 Pfam match to PF00005.18 ABC_tran; molybdenum ABC transporter, ATP-binding protein 1236512 modC 7411017 modC Campylobacter lari RM2100 molybdenum ABC transporter, ATP-binding protein YP_002575853.1 1235643 D 306263 CDS YP_002575854.1 222824280 7411018 complement(1236534..1238186) 1 NC_012039.1 Pfam match to PF00037.18 Fer4; (Fe-S)-binding protein 1238186 7411018 Cla_1285 Campylobacter lari RM2100 (Fe-S)-binding protein YP_002575854.1 1236534 R 306263 CDS YP_002575855.1 222824281 7411019 1238276..1239607 1 NC_012039.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 1239607 selA 7411019 selA Campylobacter lari RM2100 selenocysteine synthase YP_002575855.1 1238276 D 306263 CDS YP_002575856.1 222824282 7411020 1239600..1241405 1 NC_012039.1 Pfam matches to PF00009.18 GTP_EFTU, and to PF03144.16 GTP_EFTU_D2; selenocysteine-specific elongation factor 1241405 selB 7411020 selB Campylobacter lari RM2100 selenocysteine-specific elongation factor YP_002575856.1 1239600 D 306263 CDS YP_002575857.1 222824283 7411021 1241459..1242172 1 NC_012039.1 hypothetical protein 1242172 7411021 Cla_1288 Campylobacter lari RM2100 hypothetical protein YP_002575857.1 1241459 D 306263 CDS YP_002575858.1 222824284 7411022 1242159..1242686 1 NC_012039.1 hypothetical protein 1242686 7411022 Cla_1289 Campylobacter lari RM2100 hypothetical protein YP_002575858.1 1242159 D 306263 CDS YP_002575859.1 222824285 7411023 complement(1242709..1244076) 1 NC_012039.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 1244076 gdhA 7411023 gdhA Campylobacter lari RM2100 glutamate dehydrogenase YP_002575859.1 1242709 R 306263 CDS YP_002575860.1 222824286 7411024 complement(1244089..1244754) 1 NC_012039.1 Pfam match to PF02621.5 DUF178; hypothetical protein 1244754 7411024 Cla_1291 Campylobacter lari RM2100 hypothetical protein YP_002575860.1 1244089 R 306263 CDS YP_002575861.1 222824287 7411025 complement(1245001..1246236) 1 NC_012039.1 Pfam matches to PF00390.10 malic, and to PF03949.6 Malic_M; malate oxidoreductase 1246236 mez 7411025 mez Campylobacter lari RM2100 malate oxidoreductase YP_002575861.1 1245001 R 306263 CDS YP_002575862.1 222824288 7411026 complement(1246236..1247627) 1 NC_012039.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1247627 gltX 7411026 gltX Campylobacter lari RM2100 glutamyl-tRNA synthetase YP_002575862.1 1246236 R 306263 CDS YP_002575863.1 222824289 7411027 1247692..1248519 1 NC_012039.1 Pfam match to PF09312.2 SurA_N; hypothetical protein 1248519 7411027 Cla_1294 Campylobacter lari RM2100 hypothetical protein YP_002575863.1 1247692 D 306263 CDS YP_002575864.1 222824290 7411028 complement(1248540..1249871) 1 NC_012039.1 biotin carboxylase; biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA; catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; biotin carboxylase 1249871 accC 7411028 accC Campylobacter lari RM2100 biotin carboxylase YP_002575864.1 1248540 R 306263 CDS YP_002575865.1 222824291 7411029 complement(1249873..1250322) 1 NC_012039.1 Pfam match to PF00364.13 Biotin_lipoyl; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1250322 accB 7411029 accB Campylobacter lari RM2100 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_002575865.1 1249873 R 306263 CDS YP_002575866.1 222824292 7411030 1250454..1251014 1 NC_012039.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 1251014 dcd 7411030 dcd Campylobacter lari RM2100 deoxycytidine triphosphate deaminase YP_002575866.1 1250454 D 306263 CDS YP_002575867.1 222824293 7411031 1251065..1252072 1 NC_012039.1 Pfam match to PF02719.6 Polysacc_synt_2; UDP-GlcNAc C6-dehydratase/C4-reductase 1252072 pseB 7411031 pseB Campylobacter lari RM2100 UDP-GlcNAc C6-dehydratase/C4-reductase YP_002575867.1 1251065 D 306263 CDS YP_002575868.1 222824294 7411032 1252069..1253199 1 NC_012039.1 Pfam match to PF01041.8 DegT_DnrJ_EryC1; aminotransferase, DegT/DnrJ/EryC1/StrS family 1253199 7411032 Cla_1299 Campylobacter lari RM2100 aminotransferase, DegT/DnrJ/EryC1/StrS family YP_002575868.1 1252069 D 306263 CDS YP_002575869.1 222824295 7411033 1253192..1254460 1 NC_012039.1 hypothetical protein 1254460 7411033 Cla_1300 Campylobacter lari RM2100 hypothetical protein YP_002575869.1 1253192 D 306263 CDS YP_002575870.1 222824296 7411034 1254457..1255239 1 NC_012039.1 hypothetical protein 1255239 7411034 Cla_1301 Campylobacter lari RM2100 hypothetical protein YP_002575870.1 1254457 D 306263 CDS YP_002575871.1 222824297 7411035 1255241..1255465 1 NC_012039.1 acyl carrier protein 1255465 acpP2 7411035 acpP2 Campylobacter lari RM2100 acyl carrier protein YP_002575871.1 1255241 D 306263 CDS YP_002575872.1 222824298 7411036 1255459..1256361 1 NC_012039.1 Pfam match to PF08242.3 Methyltransf_12; methyltransferase type 12 domain 1256361 7411036 Cla_1303 Campylobacter lari RM2100 methyltransferase type 12 domain YP_002575872.1 1255459 D 306263 CDS YP_002575873.1 222824299 7411037 1256358..1257881 1 NC_012039.1 HAD superfamily hydrolase 1257881 7411037 Cla_1304 Campylobacter lari RM2100 HAD superfamily hydrolase YP_002575873.1 1256358 D 306263 CDS YP_002575874.1 222824300 7411038 1257865..1258932 1 NC_012039.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; paralogs which do not contain the N-X-R ACP-binding site motif; 3-oxoacyl-ACP synthase 1258932 fabH1 7411038 fabH1 Campylobacter lari RM2100 3-oxoacyl-ACP synthase YP_002575874.1 1257865 D 306263 CDS YP_002575875.1 222824301 7411039 1258925..1259143 1 NC_012039.1 acyl carrier protein 1259143 acpP3 7411039 acpP3 Campylobacter lari RM2100 acyl carrier protein YP_002575875.1 1258925 D 306263 CDS YP_002575876.1 222824302 7411040 complement(1259140..1260372) 1 NC_012039.1 hypothetical protein 1260372 7411040 Cla_1307 Campylobacter lari RM2100 hypothetical protein YP_002575876.1 1259140 R 306263 CDS YP_002575877.1 222824303 7411041 complement(1260381..1261601) 1 NC_012039.1 hypothetical protein 1261601 7411041 Cla_1308 Campylobacter lari RM2100 hypothetical protein YP_002575877.1 1260381 R 306263 CDS YP_002575878.1 222824304 7411042 1261671..1262003 1 NC_012039.1 hypothetical protein 1262003 7411042 Cla_1309 Campylobacter lari RM2100 hypothetical protein YP_002575878.1 1261671 D 306263 CDS YP_002575879.1 222824305 7411043 1261960..1262454 1 NC_012039.1 hypothetical protein 1262454 7411043 Cla_1310 Campylobacter lari RM2100 hypothetical protein YP_002575879.1 1261960 D 306263 CDS YP_002575880.1 222824306 7411044 1262456..1263952 1 NC_012039.1 Pfam match to PF00501.19 AMP-binding; amino acid adenylation protein 1263952 7411044 Cla_1311 Campylobacter lari RM2100 amino acid adenylation protein YP_002575880.1 1262456 D 306263 CDS YP_002575881.1 222824307 7411045 1263939..1264655 1 NC_012039.1 Pfam match to PF00551.10 Formyl_trans_N; formyltransferase domain protein 1264655 7411045 Cla_1312 Campylobacter lari RM2100 formyltransferase domain protein YP_002575881.1 1263939 D 306263 CDS YP_002575882.1 222824308 7411046 1264670..1264894 1 NC_012039.1 acyl carrier protein 1264894 acpP4 7411046 acpP4 Campylobacter lari RM2100 acyl carrier protein YP_002575882.1 1264670 D 306263 CDS YP_002575883.1 222824309 7411047 1264891..1265856 1 NC_012039.1 3-oxoacyl-ACP synthase 1265856 7411047 Cla_1314 Campylobacter lari RM2100 3-oxoacyl-ACP synthase YP_002575883.1 1264891 D 306263 CDS YP_002575884.1 222824310 7410397 1267166..1267396 1 NC_012039.1 acyl carrier protein 1267396 acpP5 7410397 acpP5 Campylobacter lari RM2100 acyl carrier protein YP_002575884.1 1267166 D 306263 CDS YP_002575885.1 222824311 7409824 complement(1268607..1269353) 1 NC_012039.1 hypothetical protein 1269353 7409824 Cla_1318 Campylobacter lari RM2100 hypothetical protein YP_002575885.1 1268607 R 306263 CDS YP_002575886.1 222824312 7409825 complement(1269356..1270600) 1 NC_012039.1 hypothetical protein 1270600 7409825 Cla_1319 Campylobacter lari RM2100 hypothetical protein YP_002575886.1 1269356 R 306263 CDS YP_002575887.1 222824313 7409826 1270664..1271359 1 NC_012039.1 Pfam match to PF02348.10 CTP_transf_3; CMP-N-acetylneuraminic acid synthetase 1271359 pseF 7409826 pseF Campylobacter lari RM2100 CMP-N-acetylneuraminic acid synthetase YP_002575887.1 1270664 D 306263 CDS YP_002575888.1 222824314 7409827 1271356..1272180 1 NC_012039.1 nucleotidase specific for PseC product, UDP-4-amino-4,6-dideoxy-beta-L-AltNAc 1272180 pseG 7409827 pseG Campylobacter lari RM2100 nucleotidase specific for PseC product, UDP-4-amino-4,6-dideoxy-beta-L-AltNAc YP_002575888.1 1271356 D 306263 CDS YP_002575889.1 222824315 7409828 1272173..1272664 1 NC_012039.1 Pfam match to PF00583.15 Acetyltransf_1; N-acetyltransferase 1272664 pseH 7409828 pseH Campylobacter lari RM2100 N-acetyltransferase YP_002575889.1 1272173 D 306263 CDS YP_002575890.1 222824316 7409829 1272661..1273347 1 NC_012039.1 formyltransferase 1273347 7409829 Cla_1323 Campylobacter lari RM2100 formyltransferase YP_002575890.1 1272661 D 306263 CDS YP_002575891.1 222824317 7409830 1273337..1274008 1 NC_012039.1 Pfam match to PF02585.8 PIG-L; LmbE-like protein 1274008 7409830 Cla_1324 Campylobacter lari RM2100 LmbE-like protein YP_002575891.1 1273337 D 306263 CDS YP_002575892.1 222824318 7409831 1274005..1274469 1 NC_012039.1 Pfam match to PF00583.15 Acetyltransf_1; N-acetyltransferase 1274469 7409831 Cla_1325 Campylobacter lari RM2100 N-acetyltransferase YP_002575892.1 1274005 D 306263 CDS YP_002575893.1 222824319 7409832 complement(1274437..1275168) 1 NC_012039.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamide and glutamine to imidazole-glycerolphosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 1275168 hisF2 7409832 hisF2 Campylobacter lari RM2100 imidazole glycerol phosphate synthase subunit HisF YP_002575893.1 1274437 R 306263 CDS YP_002575894.1 222824320 7409833 complement(1275178..1275780) 1 NC_012039.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 1275780 hisH 7409833 hisH Campylobacter lari RM2100 imidazole glycerol phosphate synthase subunit HisH YP_002575894.1 1275178 R 306263 CDS YP_002575895.1 222824321 7409834 complement(1275777..1276913) 1 NC_012039.1 pseudaminic acid biosynthesis protein PseA 1276913 pseA 7409834 pseA Campylobacter lari RM2100 pseudaminic acid biosynthesis protein PseA YP_002575895.1 1275777 R 306263 CDS YP_002575896.1 222824322 7409835 1277025..1277804 1 NC_012039.1 Pfam match to PF01925.10 DUF81; hypothetical protein 1277804 7409835 Cla_1329 Campylobacter lari RM2100 hypothetical protein YP_002575896.1 1277025 D 306263 CDS YP_002575897.1 222824323 7409836 complement(1277796..1278872) 1 NC_012039.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 1278872 flhB 7409836 flhB Campylobacter lari RM2100 flagellar biosynthesis protein FlhB YP_002575897.1 1277796 R 306263 CDS YP_002575898.1 222824324 7409837 complement(1278941..1280977) 1 NC_012039.1 Pfam matches to PF00672.16 HAMP, and to PF00015.12 MCPsignal; MCP-domain signal transduction protein 1280977 7409837 Cla_1331 Campylobacter lari RM2100 MCP-domain signal transduction protein YP_002575898.1 1278941 R 306263 CDS YP_002575899.1 222824325 7409838 complement(1281152..1281748) 1 NC_012039.1 Pfam match to PF00578.12 AhpC-TSA; alkyl hydroperoxide reductase 1281748 ahpC 7409838 ahpC Campylobacter lari RM2100 alkyl hydroperoxide reductase YP_002575899.1 1281152 R 306263 CDS YP_002575900.1 222824326 7409839 1281934..1282218 1 NC_012039.1 Pfam match to PF00037.18 Fer4; ferredoxin 1282218 fdxA 7409839 fdxA Campylobacter lari RM2100 ferredoxin YP_002575900.1 1281934 D 306263 CDS YP_002575901.1 222824327 7409840 1282361..1282774 1 NC_012039.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 1282774 ndk 7409840 ndk Campylobacter lari RM2100 nucleoside diphosphate kinase YP_002575901.1 1282361 D 306263 CDS YP_002575902.1 222824328 7409841 1282774..1283127 1 NC_012039.1 hypothetical protein 1283127 7409841 Cla_1335 Campylobacter lari RM2100 hypothetical protein YP_002575902.1 1282774 D 306263 CDS YP_002575903.1 222824329 7409842 1283142..1283288 1 NC_012039.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1283288 rpmF 7409842 rpmF Campylobacter lari RM2100 50S ribosomal protein L32 YP_002575903.1 1283142 D 306263 CDS YP_002575904.1 222824330 7409843 1283294..1284283 1 NC_012039.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1284283 plsX 7409843 plsX Campylobacter lari RM2100 glycerol-3-phosphate acyltransferase PlsX YP_002575904.1 1283294 D 306263 CDS YP_002575905.1 222824331 7409844 1284270..1285253 1 NC_012039.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 1285253 fabH3 7409844 fabH3 Campylobacter lari RM2100 3-oxoacyl-ACP synthase YP_002575905.1 1284270 D 306263 CDS YP_002575906.1 222824332 7409845 complement(1285270..1286004) 1 NC_012039.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 1286004 motB 7409845 motB Campylobacter lari RM2100 flagellar motor protein MotB YP_002575906.1 1285270 R 306263 CDS YP_002575907.1 222824333 7409846 complement(1286014..1286787) 1 NC_012039.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 1286787 motA 7409846 motA Campylobacter lari RM2100 flagellar motor protein MotA YP_002575907.1 1286014 R 306263 CDS YP_002575908.1 222824334 7409847 complement(1286800..1289439) 1 NC_012039.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 1289439 polA 7409847 polA Campylobacter lari RM2100 DNA polymerase I YP_002575908.1 1286800 R 306263 CDS YP_002575909.1 222824335 7409848 1289572..1290924 1 NC_012039.1 Pfam match to PF07690.7 MFS_1; major facilitator superfamily transporter 1290924 7409848 Cla_1342 Campylobacter lari RM2100 major facilitator superfamily transporter YP_002575909.1 1289572 D 306263 CDS YP_002575910.1 222824336 7409849 1290921..1291928 1 NC_012039.1 Pfam match to PF01156.10 IU_nuc_hydro; inosine-uridine preferring nucleoside hydrolase 1291928 7409849 Cla_1343 Campylobacter lari RM2100 inosine-uridine preferring nucleoside hydrolase YP_002575910.1 1290921 D 306263 CDS YP_002575911.1 222824337 7409850 complement(1291884..1292327) 1 NC_012039.1 hypothetical protein 1292327 7409850 Cla_1344 Campylobacter lari RM2100 hypothetical protein YP_002575911.1 1291884 R 306263 CDS YP_002575912.1 222824338 7409851 1292602..1293777 1 NC_012039.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1293777 trpB 7409851 trpB Campylobacter lari RM2100 tryptophan synthase subunit beta YP_002575912.1 1292602 D 306263 CDS YP_002575913.1 222824339 7409852 1294047..1295633 1 NC_012039.1 Pfam match to PF02600.7 DsbB; disulfide bond formation protein, DsbB family 1295633 7409852 Cla_1346 Campylobacter lari RM2100 disulfide bond formation protein, DsbB family YP_002575913.1 1294047 D 306263 CDS YP_002575914.1 222824340 7409853 complement(1295668..1298493) 1 NC_012039.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 1298493 uvrA 7409853 uvrA Campylobacter lari RM2100 excinuclease ABC subunit A YP_002575914.1 1295668 R 306263 CDS YP_002575915.1 222824341 7409854 1298702..1300807 1 NC_012039.1 Pfam match to PF02554.5 CstA; carbon starvation protein A 1300807 cstA 7409854 cstA Campylobacter lari RM2100 carbon starvation protein A YP_002575915.1 1298702 D 306263 CDS YP_002575916.1 222824342 7409855 1300804..1300995 1 NC_012039.1 Pfam match to PF04328.4 DUF466; hypothetical protein 1300995 7409855 Cla_1349 Campylobacter lari RM2100 hypothetical protein YP_002575916.1 1300804 D 306263 CDS YP_002575917.1 222824343 7409856 complement(1301059..1302135) 1 NC_012039.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 1302135 serC 7409856 serC Campylobacter lari RM2100 phosphoserine aminotransferase YP_002575917.1 1301059 R 306263 CDS YP_002575918.1 222824344 7409857 complement(1302148..1303311) 1 NC_012039.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1303311 xseA 7409857 xseA Campylobacter lari RM2100 exodeoxyribonuclease VII large subunit YP_002575918.1 1302148 R 306263 CDS YP_002575919.1 222824345 7409858 complement(1303308..1304009) 1 NC_012039.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 1304009 ubiE 7409858 ubiE Campylobacter lari RM2100 ubiquinone/menaquinone biosynthesis methyltransferase YP_002575919.1 1303308 R 306263 CDS YP_002575920.1 222824346 7409859 complement(1304013..1304765) 1 NC_012039.1 hypothetical protein 1304765 7409859 Cla_1353 Campylobacter lari RM2100 hypothetical protein YP_002575920.1 1304013 R 306263 CDS YP_002575921.1 222824347 7409860 complement(1304777..1305193) 1 NC_012039.1 Pfam match to PF01475.10 FUR; peroxide stress regulator 1305193 perR 7409860 perR Campylobacter lari RM2100 peroxide stress regulator YP_002575921.1 1304777 R 306263 CDS YP_002575922.1 222824348 7409861 complement(1305277..1307106) 1 NC_012039.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1307106 dxs 7409861 dxs Campylobacter lari RM2100 1-deoxy-D-xylulose-5-phosphate synthase YP_002575922.1 1305277 R 306263 CDS YP_002575923.1 222824349 7409862 complement(1307103..1307921) 1 NC_012039.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 1307921 fliH 7409862 fliH Campylobacter lari RM2100 flagellar assembly protein H YP_002575923.1 1307103 R 306263 CDS YP_002575924.1 222824350 7409863 complement(1307926..1308954) 1 NC_012039.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 1308954 fliG 7409863 fliG Campylobacter lari RM2100 flagellar motor switch protein G YP_002575924.1 1307926 R 306263 CDS YP_002575925.1 222824351 7409864 complement(1308954..1310639) 1 NC_012039.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 1310639 fliF 7409864 fliF Campylobacter lari RM2100 flagellar MS-ring protein YP_002575925.1 1308954 R 306263 CDS YP_002575926.1 222824352 7409865 complement(1310654..1311745) 1 NC_012039.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 1311745 hisC 7409865 hisC Campylobacter lari RM2100 histidinol-phosphate aminotransferase YP_002575926.1 1310654 R 306263 CDS YP_002575927.1 222824353 7409866 complement(1311735..1312808) 1 NC_012039.1 Pfam matches to PF01817.12 CM_2, and to PF00800.9 PDT; chorismate mutase 1312808 pheA 7409866 pheA Campylobacter lari RM2100 chorismate mutase YP_002575927.1 1311735 R 306263 CDS YP_002575928.1 222824354 7409867 complement(1312805..1313566) 1 NC_012039.1 HAD-superfamily hydrolase, subfamily IIA 1313566 7409867 Cla_1361 Campylobacter lari RM2100 HAD-superfamily hydrolase, subfamily IIA YP_002575928.1 1312805 R 306263 CDS YP_002575929.1 222824355 7409868 complement(1313568..1314773) 1 NC_012039.1 Pfam matches to PF02784.7 Orn_Arg_deC_N, and to PF00278.13 Orn_DAP_Arg_deC; diaminopimelate decarboxylase 1314773 lysA 7409868 lysA Campylobacter lari RM2100 diaminopimelate decarboxylase YP_002575929.1 1313568 R 306263 CDS YP_002575930.1 222824356 7409869 complement(1314787..1315848) 1 NC_012039.1 Pfam match to PF03739.5 YjgP_YjgQ; hypothetical protein 1315848 7409869 Cla_1363 Campylobacter lari RM2100 hypothetical protein YP_002575930.1 1314787 R 306263 CDS YP_002575931.1 222824357 7409870 complement(1315850..1316389) 1 NC_012039.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 1316389 pth 7409870 pth Campylobacter lari RM2100 peptidyl-tRNA hydrolase YP_002575931.1 1315850 R 306263 CDS YP_002575932.1 222824358 7409871 complement(1316391..1316927) 1 NC_012039.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 1316927 rplY 7409871 rplY Campylobacter lari RM2100 50S ribosomal protein L25 YP_002575932.1 1316391 R 306263 CDS YP_002575933.1 222824359 7409872 complement(1316974..1317945) 1 NC_012039.1 Important for the balance of metabolites in the pentose-phosphate pathway; transaldolase 1317945 tal 7409872 tal Campylobacter lari RM2100 transaldolase YP_002575933.1 1316974 R 306263 CDS YP_002575934.1 222824360 7409873 complement(1317942..1318568) 1 NC_012039.1 Pfam match to PF00702.17 Hydrolase; 3-phosphoserine phosphatase 1318568 serB 7409873 serB Campylobacter lari RM2100 3-phosphoserine phosphatase YP_002575934.1 1317942 R 306263 CDS YP_002575935.1 222824361 7409874 complement(1318568..1319086) 1 NC_012039.1 Pfam match to PF01584.10 CheW; chemotaxis protein CheW 1319086 cheW 7409874 cheW Campylobacter lari RM2100 chemotaxis protein CheW YP_002575935.1 1318568 R 306263 CDS YP_002575936.1 222824362 7409875 complement(1319091..1321403) 1 NC_012039.1 Pfam matches to PF01627.14 Hpt, and to PF02895.5 H-kinase_dim; chemotaxis protein CheA 1321403 cheA 7409875 cheA Campylobacter lari RM2100 chemotaxis protein CheA YP_002575936.1 1319091 R 306263 CDS YP_002575937.1 222824363 7409876 complement(1321406..1322359) 1 NC_012039.1 Pfam matches to PF01584.10 CheW, and to PF00072.15 Response_reg; chemotaxis protein CheV 1322359 cheV 7409876 cheV Campylobacter lari RM2100 chemotaxis protein CheV YP_002575937.1 1321406 R 306263 CDS YP_002575938.1 222824364 7409877 complement(1322359..1323087) 1 NC_012039.1 hypothetical protein 1323087 7409877 Cla_1371 Campylobacter lari RM2100 hypothetical protein YP_002575938.1 1322359 R 306263 CDS YP_002575939.1 222824365 7409878 complement(1323091..1323576) 1 NC_012039.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 1323576 greA 7409878 greA Campylobacter lari RM2100 transcription elongation factor GreA YP_002575939.1 1323091 R 306263 CDS YP_002575940.1 222824366 7409879 complement(1323586..1324680) 1 NC_012039.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; ipid-A-disaccharide synthase 1324680 lpxB 7409879 lpxB Campylobacter lari RM2100 ipid-A-disaccharide synthase YP_002575940.1 1323586 R 306263 CDS YP_002575941.1 222824367 7409880 complement(1324759..1325331) 1 NC_012039.1 Pfam match to PF03498.5 CDtoxinA; cytolethal distending toxin, subunit CdtC 1325331 cdtC 7409880 cdtC Campylobacter lari RM2100 cytolethal distending toxin, subunit CdtC YP_002575941.1 1324759 R 306263 CDS YP_002575942.1 222824368 7409881 complement(1325341..1326120) 1 NC_012039.1 pseudogene; Pfam match to PF03372.14 Exo_endo_phos; cytolethal distending toxin, subunit CdtB 1326120 cdtB 7409881 cdtB Campylobacter lari RM2100 cytolethal distending toxin, subunit CdtB YP_002575942.1 1325341 R 306263 CDS YP_002575943.1 222824369 7409882 complement(1326145..1326957) 1 NC_012039.1 Pfam match to PF03498.5 CDtoxinA; cytolethal distending toxin, subunit CdtA 1326957 cdtA 7409882 cdtA Campylobacter lari RM2100 cytolethal distending toxin, subunit CdtA YP_002575943.1 1326145 R 306263 CDS YP_002575944.1 222824370 7409883 1327103..1328335 1 NC_012039.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 1328335 pepT 7409883 pepT Campylobacter lari RM2100 peptidase T YP_002575944.1 1327103 D 306263 CDS YP_002575945.1 222824371 7409884 complement(1328352..1329644) 1 NC_012039.1 Pfam match to PF03606.6 DcuC; C4-dicarboxylate transporter 1329644 7409884 Cla_1378 Campylobacter lari RM2100 C4-dicarboxylate transporter YP_002575945.1 1328352 R 306263 CDS YP_002575946.1 222824372 7409885 complement(1329654..1330358) 1 NC_012039.1 alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family; peptidase E 1330358 pepE 7409885 pepE Campylobacter lari RM2100 peptidase E YP_002575946.1 1329654 R 306263 CDS YP_002575947.1 222824373 7409886 complement(1330431..1331180) 1 NC_012039.1 hypothetical protein 1331180 peb3 7409886 peb3 Campylobacter lari RM2100 hypothetical protein YP_002575947.1 1330431 R 306263 CDS YP_002575948.1 222824374 7409887 1331280..1332053 1 NC_012039.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 1332053 surE 7409887 surE Campylobacter lari RM2100 stationary phase survival protein SurE YP_002575948.1 1331280 D 306263 CDS YP_002575949.1 222824375 7409888 1332046..1332699 1 NC_012039.1 Pfam match to PF00899.12 ThiF; HesA/MoeB/ThiF family protein 1332699 7409888 Cla_1382 Campylobacter lari RM2100 HesA/MoeB/ThiF family protein YP_002575949.1 1332046 D 306263 CDS YP_002575950.1 222824376 7409889 1332747..1333493 1 NC_012039.1 Pfam match to PF00905.13 Transpeptidase; beta-lactamase 1333493 7409889 Cla_1383 Campylobacter lari RM2100 beta-lactamase YP_002575950.1 1332747 D 306263 CDS YP_002575951.1 222824377 7409890 1333506..1334327 1 NC_012039.1 Pfam match to PF02517.7 Abi; metal-dependent membrane protease 1334327 7409890 Cla_1384 Campylobacter lari RM2100 metal-dependent membrane protease YP_002575951.1 1333506 D 306263 CDS YP_002575952.1 222824378 7409891 complement(1334324..1335025) 1 NC_012039.1 biotin synthesis protein BioC 1335025 bioC 7409891 bioC Campylobacter lari RM2100 biotin synthesis protein BioC YP_002575952.1 1334324 R 306263 CDS YP_002575953.1 222824379 7409892 complement(1335022..1335636) 1 NC_012039.1 Pfam match to PF04301.4 DUF452; hypothetical protein 1335636 7409892 Cla_1386 Campylobacter lari RM2100 hypothetical protein YP_002575953.1 1335022 R 306263 CDS YP_002575954.1 222824380 7409893 complement(1335633..1336757) 1 NC_012039.1 Pfam match to PF00155.12 Aminotran_1_2; 8-amino-7-oxononanoate synthase 1336757 bioF 7409893 bioF Campylobacter lari RM2100 8-amino-7-oxononanoate synthase YP_002575954.1 1335633 R 306263 CDS YP_002575955.1 222824381 7409894 complement(1336757..1337311) 1 NC_012039.1 Pfam matches to PF08238.3 Sel1, and to PF08238.3 Sel1; hypothetical protein 1337311 7409894 Cla_1388 Campylobacter lari RM2100 hypothetical protein YP_002575955.1 1336757 R 306263 CDS YP_002575956.1 222824382 7409895 1337441..1338709 1 NC_012039.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1338709 bioA 7409895 bioA Campylobacter lari RM2100 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_002575956.1 1337441 D 306263 CDS YP_002575957.1 222824383 7409896 complement(1338683..1339255) 1 NC_012039.1 dethiobiotin synthetase 1339255 bioD 7409896 bioD Campylobacter lari RM2100 dethiobiotin synthetase YP_002575957.1 1338683 R 306263 CDS YP_002575958.1 222824384 7409897 complement(1339263..1339577) 1 NC_012039.1 Pfam match to PF00893.10 Multi_Drug_Res; multidrug resistance protein, SMR family 1339577 7409897 Cla_1391 Campylobacter lari RM2100 multidrug resistance protein, SMR family YP_002575958.1 1339263 R 306263 CDS YP_002575959.1 222824385 7409898 complement(1339577..1339924) 1 NC_012039.1 Pfam match to PF00893.10 Multi_Drug_Res; multidrug resistance protein, SMR family 1339924 7409898 Cla_1392 Campylobacter lari RM2100 multidrug resistance protein, SMR family YP_002575959.1 1339577 R 306263 CDS YP_002575960.1 222824386 7409899 1340096..1341130 1 NC_012039.1 Pfam match to PF01112.9 Asparaginase_2; L-asparaginase 1341130 ansB 7409899 ansB Campylobacter lari RM2100 L-asparaginase YP_002575960.1 1340096 D 306263 CDS YP_002575961.1 222824387 7409900 complement(1341131..1341553) 1 NC_012039.1 hypothetical protein 1341553 7409900 Cla_1394 Campylobacter lari RM2100 hypothetical protein YP_002575961.1 1341131 R 306263 CDS YP_002575962.1 222824388 7409901 complement(1341550..1344813) 1 NC_012039.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1344813 carB 7409901 carB Campylobacter lari RM2100 carbamoyl phosphate synthase large subunit YP_002575962.1 1341550 R 306263 CDS YP_002575963.1 222824389 7409902 complement(1344895..1345635) 1 NC_012039.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 1345635 7409902 Cla_1396 Campylobacter lari RM2100 rod shape-determining protein MreC YP_002575963.1 1344895 R 306263 CDS YP_002575964.1 222824390 7409903 complement(1345625..1346662) 1 NC_012039.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 1346662 mreB 7409903 mreB Campylobacter lari RM2100 rod shape-determining protein MreB YP_002575964.1 1345625 R 306263 CDS YP_002575965.1 222824391 7409904 complement(1346659..1347894) 1 NC_012039.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1347894 clpX 7409904 clpX Campylobacter lari RM2100 ATP-dependent protease ATP-binding subunit ClpX YP_002575965.1 1346659 R 306263 CDS YP_002575966.1 222824392 7409906 complement(1347887..1348678) 1 NC_012039.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 1348678 lpxA 7409906 lpxA Campylobacter lari RM2100 UDP-N-acetylglucosamine acyltransferase YP_002575966.1 1347887 R 306263 CDS YP_002575967.1 222824393 7409907 complement(1348678..1349118) 1 NC_012039.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1349118 fabZ 7409907 fabZ Campylobacter lari RM2100 (3R)-hydroxymyristoyl-ACP dehydratase YP_002575967.1 1348678 R 306263 CDS YP_002575968.1 222824394 7409908 complement(1349187..1350260) 1 NC_012039.1 Pfam match to PF02677.5 DUF208; hypothetical protein 1350260 7409908 Cla_1401 Campylobacter lari RM2100 hypothetical protein YP_002575968.1 1349187 R 306263 CDS YP_002575969.1 222824395 7409909 complement(1350254..1350715) 1 NC_012039.1 Pfam match to PF00578.12 AhpC-TSA; bacterioferritin comigratory protein (AhpC/Tsa family) 1350715 bcp 7409909 bcp Campylobacter lari RM2100 bacterioferritin comigratory protein (AhpC/Tsa family) YP_002575969.1 1350254 R 306263 CDS YP_002575970.1 222824396 7409910 complement(1350712..1350918) 1 NC_012039.1 Pfam match to PF01361.12 Tautomerase; 4-oxalocrotonate tautomerase 1350918 7409910 Cla_1403 Campylobacter lari RM2100 4-oxalocrotonate tautomerase YP_002575970.1 1350712 R 306263 CDS YP_002575971.1 222824397 7409911 1351016..1351930 1 NC_012039.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 1351930 ilvE 7409911 ilvE Campylobacter lari RM2100 branched-chain amino acid aminotransferase YP_002575971.1 1351016 D 306263 CDS YP_002575972.1 222824398 7409912 1351943..1353013 1 NC_012039.1 Pfam match to PF01145.16 Band_7; hypothetical protein 1353013 7409912 Cla_1405 Campylobacter lari RM2100 hypothetical protein YP_002575972.1 1351943 D 306263 CDS YP_002575973.1 222824399 7409913 1353031..1353567 1 NC_012039.1 hypothetical protein 1353567 7409913 Cla_1406 Campylobacter lari RM2100 hypothetical protein YP_002575973.1 1353031 D 306263 CDS YP_002575974.1 222824400 7409914 1353567..1354097 1 NC_012039.1 hypothetical protein 1354097 7409914 Cla_1407 Campylobacter lari RM2100 hypothetical protein YP_002575974.1 1353567 D 306263 CDS YP_002575975.1 222824401 7409915 complement(1354101..1355441) 1 NC_012039.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 1355441 purF 7409915 purF Campylobacter lari RM2100 amidophosphoribosyltransferase YP_002575975.1 1354101 R 306263 CDS YP_002575976.1 222824402 7409916 complement(1355442..1356170) 1 NC_012039.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 1356170 dapB 7409916 dapB Campylobacter lari RM2100 dihydrodipicolinate reductase YP_002575976.1 1355442 R 306263 CDS YP_002575977.1 222824403 7409917 complement(1356241..1356540) 1 NC_012039.1 hypothetical protein 1356540 7409917 Cla_1410 Campylobacter lari RM2100 hypothetical protein YP_002575977.1 1356241 R 306263 CDS YP_002575978.1 222824404 7409918 complement(1356605..1357546) 1 NC_012039.1 Pfam match to PF07992.5 Pyr_redox_2; thioredoxin reductase 1357546 trxB 7409918 trxB Campylobacter lari RM2100 thioredoxin reductase YP_002575978.1 1356605 R 306263 CDS YP_002575979.1 222824405 7409919 complement(1357662..1357976) 1 NC_012039.1 Pfam match to PF00085.11 Thioredoxin; thioredoxin 1357976 trx 7409919 trx Campylobacter lari RM2100 thioredoxin YP_002575979.1 1357662 R 306263 CDS YP_002575980.1 222824406 7409920 complement(1358028..1358366) 1 NC_012039.1 Pfam match to PF02021.8 UPF0102; hypothetical protein 1358366 7409920 Cla_1413 Campylobacter lari RM2100 hypothetical protein YP_002575980.1 1358028 R 306263 CDS YP_002575981.1 222824407 7409921 complement(1358367..1359620) 1 NC_012039.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1359620 hom 7409921 hom Campylobacter lari RM2100 homoserine dehydrogenase YP_002575981.1 1358367 R 306263 CDS YP_002575982.1 222824408 7409922 complement(1359622..1360824) 1 NC_012039.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1360824 aspC 7409922 aspC Campylobacter lari RM2100 aspartate aminotransferase YP_002575982.1 1359622 R 306263 CDS YP_002575983.1 222824409 7409923 complement(1360837..1361643) 1 NC_012039.1 hypothetical protein 1361643 7409923 Cla_1416 Campylobacter lari RM2100 hypothetical protein YP_002575983.1 1360837 R 306263 CDS YP_002575984.1 222824410 7409924 complement(1361637..1362515) 1 NC_012039.1 hypothetical protein 1362515 7409924 Cla_1417 Campylobacter lari RM2100 hypothetical protein YP_002575984.1 1361637 R 306263 CDS YP_002575985.1 222824411 7409925 complement(1362508..1363188) 1 NC_012039.1 Pfam matches to PF08032.3 SpoU_sub_bind, and to PF00588.10 SpoU_methylase; rRNA methyltransferase, TrmH family 1363188 7409925 Cla_1418 Campylobacter lari RM2100 rRNA methyltransferase, TrmH family YP_002575985.1 1362508 R 306263 CDS YP_002575986.1 222824412 7409926 complement(1363208..1364026) 1 NC_012039.1 Pfam match to PF00590.11 TP_methylase; tetrapyrrole methylase 1364026 7409926 Cla_1419 Campylobacter lari RM2100 tetrapyrrole methylase YP_002575986.1 1363208 R 306263 CDS YP_002575987.1 222824413 7409927 complement(1364026..1364226) 1 NC_012039.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 1364226 rpmE 7409927 rpmE Campylobacter lari RM2100 50S ribosomal protein L31 YP_002575987.1 1364026 R 306263 CDS YP_002575988.1 222824414 7409928 complement(1364304..1364966) 1 NC_012039.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 1364966 7409928 Cla_1421 Campylobacter lari RM2100 16S ribosomal RNA methyltransferase RsmE YP_002575988.1 1364304 R 306263 CDS YP_002575989.1 222824415 7409929 complement(1364966..1365376) 1 NC_012039.1 hypothetical protein 1365376 7409929 Cla_1422 Campylobacter lari RM2100 hypothetical protein YP_002575989.1 1364966 R 306263 CDS YP_002575990.1 222824416 7409930 complement(1365376..1365576) 1 NC_012039.1 hypothetical protein 1365576 7409930 Cla_1423 Campylobacter lari RM2100 hypothetical protein YP_002575990.1 1365376 R 306263 CDS YP_002575991.1 222824417 7409931 complement(1365576..1366160) 1 NC_012039.1 6-pyruvoyl tetrahydrobiopterin synthase 1366160 7409931 Cla_1424 Campylobacter lari RM2100 6-pyruvoyl tetrahydrobiopterin synthase YP_002575991.1 1365576 R 306263 CDS YP_002575992.1 222824418 7409932 complement(1366157..1366906) 1 NC_012039.1 radical SAM domain protein 1366906 7409932 Cla_1425 Campylobacter lari RM2100 radical SAM domain protein YP_002575992.1 1366157 R 306263 CDS YP_002575993.1 222824419 7409933 complement(1366906..1367874) 1 NC_012039.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 1367874 moaA 7409933 moaA Campylobacter lari RM2100 molybdenum cofactor biosynthesis protein A YP_002575993.1 1366906 R 306263 CDS YP_002575994.1 222824420 7409934 complement(1367884..1368405) 1 NC_012039.1 hypothetical protein 1368405 7409934 Cla_1427 Campylobacter lari RM2100 hypothetical protein YP_002575994.1 1367884 R 306263 CDS YP_002575995.1 222824421 7409935 complement(1368398..1368901) 1 NC_012039.1 hypothetical protein 1368901 7409935 Cla_1428 Campylobacter lari RM2100 hypothetical protein YP_002575995.1 1368398 R 306263 CDS YP_002575996.1 222824422 7409936 complement(1368892..1369767) 1 NC_012039.1 UbiA prenyltransferase catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; prenyltransferase 1369767 ubiA 7409936 ubiA Campylobacter lari RM2100 prenyltransferase YP_002575996.1 1368892 R 306263 CDS YP_002575997.1 222824423 7409937 1369837..1370712 1 NC_012039.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 1370712 miaA 7409937 miaA Campylobacter lari RM2100 tRNA delta(2)-isopentenylpyrophosphate transferase YP_002575997.1 1369837 D 306263 CDS YP_002575998.1 222824424 7409938 complement(1370703..1373066) 1 NC_012039.1 paralysed flagella protein PflA 1373066 pflA 7409938 pflA Campylobacter lari RM2100 paralysed flagella protein PflA YP_002575998.1 1370703 R 306263 CDS YP_002575999.1 222824425 7409939 complement(1373091..1374488) 1 NC_012039.1 Pfam match to PF00361.11 Oxidored_q1; NADH-quinone oxidoreductase, N subunit 1374488 nuoN 7409939 nuoN Campylobacter lari RM2100 NADH-quinone oxidoreductase, N subunit YP_002575999.1 1373091 R 306263 CDS YP_002576000.1 222824426 7409940 complement(1374488..1375957) 1 NC_012039.1 Pfam match to PF00361.11 Oxidored_q1; NADH-quinone oxidoreductase, M subunit 1375957 nuoM 7409940 nuoM Campylobacter lari RM2100 NADH-quinone oxidoreductase, M subunit YP_002576000.1 1374488 R 306263 CDS YP_002576001.1 222824427 7409941 complement(1375959..1377761) 1 NC_012039.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 1377761 nuoL 7409941 nuoL Campylobacter lari RM2100 NADH dehydrogenase subunit L YP_002576001.1 1375959 R 306263 CDS YP_002576002.1 222824428 7409942 complement(1377749..1378063) 1 NC_012039.1 Pfam match to PF00420.15 Oxidored_q2; NADH-quinone oxidoreductase, K subunit 1378063 nuoK 7409942 nuoK Campylobacter lari RM2100 NADH-quinone oxidoreductase, K subunit YP_002576002.1 1377749 R 306263 CDS YP_002576003.1 222824429 7409943 complement(1378060..1378566) 1 NC_012039.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 1378566 nuoJ 7409943 nuoJ Campylobacter lari RM2100 NADH dehydrogenase subunit J YP_002576003.1 1378060 R 306263 CDS YP_002576004.1 222824430 7409944 complement(1378559..1379191) 1 NC_012039.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1379191 nuoI 7409944 nuoI Campylobacter lari RM2100 NADH dehydrogenase subunit I YP_002576004.1 1378559 R 306263 CDS YP_002576005.1 222824431 7409945 complement(1379200..1380198) 1 NC_012039.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 1380198 nuoH 7409945 nuoH Campylobacter lari RM2100 NADH dehydrogenase subunit H YP_002576005.1 1379200 R 306263 CDS YP_002576006.1 222824432 7409946 complement(1380195..1382648) 1 NC_012039.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G 1382648 nuoG 7409946 nuoG Campylobacter lari RM2100 NADH dehydrogenase subunit G YP_002576006.1 1380195 R 306263 CDS YP_002576007.1 222824433 7409947 complement(1382645..1383358) 1 NC_012039.1 NADH-quinone oxidoreductase, F subunit 1383358 7409947 Cla_1440 Campylobacter lari RM2100 NADH-quinone oxidoreductase, F subunit YP_002576007.1 1382645 R 306263 CDS YP_002576008.1 222824434 7409948 complement(1383355..1383582) 1 NC_012039.1 NADH-quinone oxidoreductase, E subunit 1383582 7409948 Cla_1441 Campylobacter lari RM2100 NADH-quinone oxidoreductase, E subunit YP_002576008.1 1383355 R 306263 CDS YP_002576009.1 222824435 7409949 complement(1383579..1384805) 1 NC_012039.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 1384805 nuoD 7409949 nuoD Campylobacter lari RM2100 NADH dehydrogenase subunit D YP_002576009.1 1383579 R 306263 CDS YP_002576010.1 222824436 7409950 complement(1384807..1385601) 1 NC_012039.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit C 1385601 nuoC 7409950 nuoC Campylobacter lari RM2100 NADH dehydrogenase subunit C YP_002576010.1 1384807 R 306263 CDS YP_002576011.1 222824437 7409951 complement(1385598..1386095) 1 NC_012039.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1386095 nuoB 7409951 nuoB Campylobacter lari RM2100 NADH dehydrogenase subunit B YP_002576011.1 1385598 R 306263 CDS YP_002576012.1 222824438 7409952 complement(1386074..1386493) 1 NC_012039.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit A 1386493 nuoA 7409952 nuoA Campylobacter lari RM2100 NADH dehydrogenase subunit A YP_002576012.1 1386074 R 306263 CDS YP_002576013.1 222824439 7409953 complement(1386614..1387282) 1 NC_012039.1 Pfam match to PF00005.18 ABC_tran; peptide ABC transporter ATP-binding protein 1387282 dppF 7409953 dppF Campylobacter lari RM2100 peptide ABC transporter ATP-binding protein YP_002576013.1 1386614 R 306263 CDS YP_002576014.1 222824440 7409954 complement(1387266..1388039) 1 NC_012039.1 Pfam match to PF00005.18 ABC_tran; peptide ABC transporter ATP-binding protein 1388039 dppD 7409954 dppD Campylobacter lari RM2100 peptide ABC transporter ATP-binding protein YP_002576014.1 1387266 R 306263 CDS YP_002576015.1 222824441 7409955 complement(1388036..1388812) 1 NC_012039.1 Pfam match to PF00528.13 BPD_transp_1; peptide ABC transporter permease 1388812 dppC 7409955 dppC Campylobacter lari RM2100 peptide ABC transporter permease YP_002576015.1 1388036 R 306263 CDS YP_002576016.1 222824442 7409956 complement(1388805..1389755) 1 NC_012039.1 Pfam match to PF00528.13 BPD_transp_1; peptide ABC transporter permease 1389755 dppB 7409956 dppB Campylobacter lari RM2100 peptide ABC transporter permease YP_002576016.1 1388805 R 306263 CDS YP_002576017.1 222824443 7409957 complement(1389755..1391290) 1 NC_012039.1 Pfam match to PF00496.13 SBP_bac_5; peptide ABC transporter substrate-binding protein 1391290 dppA 7409957 dppA Campylobacter lari RM2100 peptide ABC transporter substrate-binding protein YP_002576017.1 1389755 R 306263 CDS YP_002576018.1 222824444 7409958 complement(1391333..1393276) 1 NC_012039.1 Pfam match to PF02028.8 BCCT; BCCT (betaine/carnitine/choline) family transporter 1393276 7409958 Cla_1451 Campylobacter lari RM2100 BCCT (betaine/carnitine/choline) family transporter YP_002576018.1 1391333 R 306263 CDS YP_002576019.1 222824445 7409959 complement(1393475..1394125) 1 NC_012039.1 Pfam match to PF02589.6 DUF162; hypothetical protein 1394125 7409959 Cla_1452 Campylobacter lari RM2100 hypothetical protein YP_002576019.1 1393475 R 306263 CDS YP_002576020.1 222824446 7409960 complement(1394118..1395533) 1 NC_012039.1 Pfam match to PF02589.6 DUF162; iron-sulfur cluster binding protein 1395533 7409960 Cla_1453 Campylobacter lari RM2100 iron-sulfur cluster binding protein YP_002576020.1 1394118 R 306263 CDS YP_002576021.1 222824447 7409961 complement(1395530..1396267) 1 NC_012039.1 Pfam matches to PF02754.7 CCG, and to PF02754.7 CCG; cysteine-rich domain protein 1396267 7409961 Cla_1454 Campylobacter lari RM2100 cysteine-rich domain protein YP_002576021.1 1395530 R 306263 CDS YP_002576022.1 222824448 7409962 complement(1396277..1397932) 1 NC_012039.1 Pfam match to PF02652.5 Lactate_perm; L-lactate permease 1397932 lctP 7409962 lctP Campylobacter lari RM2100 L-lactate permease YP_002576022.1 1396277 R 306263 CDS YP_002576023.1 222824449 7409963 complement(1398209..1399699) 1 NC_012039.1 hypothetical protein 1399699 7409963 Cla_1456 Campylobacter lari RM2100 hypothetical protein YP_002576023.1 1398209 R 306263 CDS YP_002576024.1 222824450 7409964 complement(1399699..1403469) 1 NC_012039.1 fusion of CJ0031 and CJ0032; type IIS restriction/modification enzyme 1403469 7409964 Cla_1457 Campylobacter lari RM2100 type IIS restriction/modification enzyme YP_002576024.1 1399699 R 306263 CDS YP_002576025.1 222824451 7409965 1403667..1404245 1 NC_012039.1 trimethylamine N-oxide reductase, cytochrome c-type subunit 1404245 torC 7409965 torC Campylobacter lari RM2100 trimethylamine N-oxide reductase, cytochrome c-type subunit YP_002576025.1 1403667 D 306263 CDS YP_002576026.1 222824452 7409966 1404247..1406766 1 NC_012039.1 Pfam matches to PF00384.13 Molybdopterin, and to PF01568.12 Molydop_binding; trimethylamine N-oxide reductase, catalytic subunit 1406766 torA 7409966 torA Campylobacter lari RM2100 trimethylamine N-oxide reductase, catalytic subunit YP_002576026.1 1404247 D 306263 CDS YP_002576027.1 222824453 7409967 complement(1407505..1407807) 1 NC_012039.1 hypothetical protein 1407807 7409967 Cla_1460 Campylobacter lari RM2100 hypothetical protein YP_002576027.1 1407505 R 306263 CDS YP_002576028.1 222824454 7409978 complement(1415808..1416530) 1 NC_012039.1 Pfam match to PF03741.7 TerC; integral membrane protein, TerC family 1416530 7409978 Cla_1471 Campylobacter lari RM2100 integral membrane protein, TerC family YP_002576028.1 1415808 R 306263 CDS YP_002576029.1 222824455 7409979 complement(1416572..1417144) 1 NC_012039.1 Pfam match to PF00551.10 Formyl_trans_N; phosphoribosylglycinamide formyltransferase 1417144 purN 7409979 purN Campylobacter lari RM2100 phosphoribosylglycinamide formyltransferase YP_002576029.1 1416572 R 306263 CDS YP_002576030.1 222824456 7409980 complement(1417135..1418481) 1 NC_012039.1 Pfam matches to PF03853.6 YjeF_N, and to PF01256.8 Carb_kinase; sugar kinase 1418481 7409980 Cla_1473 Campylobacter lari RM2100 sugar kinase YP_002576030.1 1417135 R 306263 CDS YP_002576031.1 222824457 7409981 complement(1418465..1419805) 1 NC_012039.1 Pfam match to PF02646.7 RmuC; DNA recombination protein RmuC 1419805 rmuC 7409981 rmuC Campylobacter lari RM2100 DNA recombination protein RmuC YP_002576031.1 1418465 R 306263 CDS YP_002576032.1 222824458 7409982 complement(1419808..1420497) 1 NC_012039.1 Pfam match to PF01936.9 DUF88; hypothetical protein 1420497 7409982 Cla_1475 Campylobacter lari RM2100 hypothetical protein YP_002576032.1 1419808 R 306263 CDS YP_002576033.1 222824459 7409983 complement(1420506..1422014) 1 NC_012039.1 Pfam match to PF01078.12 Mg_chelatase; Mg chelatase-related protein 1422014 7409983 Cla_1476 Campylobacter lari RM2100 Mg chelatase-related protein YP_002576033.1 1420506 R 306263 CDS YP_002576034.1 222824460 7409984 complement(1422011..1422532) 1 NC_012039.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1422532 def 7409984 def Campylobacter lari RM2100 peptide deformylase YP_002576034.1 1422011 R 306263 CDS YP_002576035.1 222824461 7409985 complement(1422529..1423569) 1 NC_012039.1 Pfam match to PF00990.12 GGDEF; diguanylate cyclase 1423569 7409985 Cla_1478 Campylobacter lari RM2100 diguanylate cyclase YP_002576035.1 1422529 R 306263 CDS YP_002576036.1 222824462 7409986 complement(1423584..1424174) 1 NC_012039.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 1424174 clpP 7409986 clpP Campylobacter lari RM2100 ATP-dependent Clp protease proteolytic subunit YP_002576036.1 1423584 R 306263 CDS YP_002576037.1 222824463 7411226 complement(1424174..1425493) 1 NC_012039.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1425493 tig 7411226 tig Campylobacter lari RM2100 trigger factor YP_002576037.1 1424174 R 306263 CDS YP_002576038.1 222824464 7411227 1425603..1426175 1 NC_012039.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 1426175 folE 7411227 folE Campylobacter lari RM2100 GTP cyclohydrolase I YP_002576038.1 1425603 D 306263 CDS YP_002576039.1 222824465 7411228 1426175..1427485 1 NC_012039.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 1427485 fliI 7411228 fliI Campylobacter lari RM2100 flagellum-specific ATP synthase YP_002576039.1 1426175 D 306263 CDS YP_002576040.1 222824466 7411229 1427539..1428027 1 NC_012039.1 hypothetical protein 1428027 7411229 Cla_1483 Campylobacter lari RM2100 hypothetical protein YP_002576040.1 1427539 D 306263 CDS YP_002576041.1 222824467 7411230 1428083..1428262 1 NC_012039.1 hypothetical protein 1428262 7411230 Cla_1484 Campylobacter lari RM2100 hypothetical protein YP_002576041.1 1428083 D 306263 CDS YP_002576042.1 222824468 7411231 1428341..1429486 1 NC_012039.1 hypothetical protein 1429486 7411231 Cla_1485 Campylobacter lari RM2100 hypothetical protein YP_002576042.1 1428341 D 306263 CDS YP_002576043.1 222824469 7411232 1429609..1430787 1 NC_012039.1 Pfam match to PF00266.10 Aminotran_5; cysteine desulfurase 1430787 iscS 7411232 iscS Campylobacter lari RM2100 cysteine desulfurase YP_002576043.1 1429609 D 306263 CDS YP_002576044.1 222824470 7411233 1430798..1431769 1 NC_012039.1 Pfam matches to PF01592.7 NifU_N, and to PF04324.6 Fer2_BFD; NifU-like protein 1431769 iscU 7411233 iscU Campylobacter lari RM2100 NifU-like protein YP_002576044.1 1430798 D 306263 CDS YP_002576045.1 222824471 7411234 1431850..1433010 1 NC_012039.1 Pfam match to PF06965.3 Na_H_antiport_1; Na+/H+ antiporter 1433010 nhaA1 7411234 nhaA1 Campylobacter lari RM2100 Na+/H+ antiporter YP_002576045.1 1431850 D 306263 CDS YP_002576046.1 222824472 7411235 1433007..1434161 1 NC_012039.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 1434161 nhaA 7411235 nhaA Campylobacter lari RM2100 pH-dependent sodium/proton antiporter YP_002576046.1 1433007 D 306263 CDS YP_002576047.1 222824473 7411237 complement(1434510..1435136) 1 NC_012039.1 Pfam matches to PF03458.4 UPF0126, and to PF03458.4 UPF0126; hypothetical protein 1435136 7411237 Cla_1491 Campylobacter lari RM2100 hypothetical protein YP_002576047.1 1434510 R 306263 CDS YP_002576048.1 222824474 7411238 complement(1435170..1436213) 1 NC_012039.1 hypothetical protein 1436213 7411238 Cla_1492 Campylobacter lari RM2100 hypothetical protein YP_002576048.1 1435170 R 306263 CDS YP_002576049.1 222824475 7411239 complement(1436268..1437356) 1 NC_012039.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1437356 aroC 7411239 aroC Campylobacter lari RM2100 chorismate synthase YP_002576049.1 1436268 R 306263 CDS YP_002576050.1 222824476 7411240 complement(1437353..1438021) 1 NC_012039.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1438021 rnc 7411240 rnc Campylobacter lari RM2100 ribonuclease III YP_002576050.1 1437353 R 306263 CDS YP_002576051.1 222824477 7411241 complement(1438014..1438454) 1 NC_012039.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 1438454 rnhA 7411241 rnhA Campylobacter lari RM2100 ribonuclease H YP_002576051.1 1438014 R 306263 CDS YP_002576052.1 222824478 7411242 complement(1438451..1439413) 1 NC_012039.1 hypothetical protein 1439413 7411242 Cla_1496 Campylobacter lari RM2100 hypothetical protein YP_002576052.1 1438451 R 306263 CDS YP_002576053.1 222824479 7411243 1439488..1441275 1 NC_012039.1 synthesizes RNA primers at the replication forks; DNA primase 1441275 dnaG 7411243 dnaG Campylobacter lari RM2100 DNA primase YP_002576053.1 1439488 D 306263 CDS YP_002576054.1 222824480 7411244 1441341..1442324 1 NC_012039.1 hypothetical protein 1442324 7411244 Cla_1498 Campylobacter lari RM2100 hypothetical protein YP_002576054.1 1441341 D 306263 CDS YP_002576055.1 222824481 7411245 complement(1442348..1444432) 1 NC_012039.1 Pfam matches to PF00672.16 HAMP, and to PF00015.12 MCPsignal; MCP-domain signal transduction protein 1444432 7411245 Cla_1499 Campylobacter lari RM2100 MCP-domain signal transduction protein YP_002576055.1 1442348 R 306263 CDS YP_002576056.1 222824482 7411246 complement(1444608..1446812) 1 NC_012039.1 Pfam matches to PF00912.13 Transgly, and to PF00905.13 Transpeptidase; penicillin-binding protein 1C 1446812 pbpC2 7411246 pbpC2 Campylobacter lari RM2100 penicillin-binding protein 1C YP_002576056.1 1444608 R 306263 CDS YP_002576057.1 222824483 7411247 complement(1446809..1452094) 1 NC_012039.1 Pfam matches to PF01835.10 A2M_N, and to PF07703.5 A2M_N_2; alpha-2-macroglobulin 1452094 7411247 Cla_1501 Campylobacter lari RM2100 alpha-2-macroglobulin YP_002576057.1 1446809 R 306263 CDS YP_002576058.1 222824484 7411248 1452195..1452557 1 NC_012039.1 hypothetical protein 1452557 7411248 Cla_1502 Campylobacter lari RM2100 hypothetical protein YP_002576058.1 1452195 D 306263 CDS YP_002576059.1 222824485 7411249 1452589..1452903 1 NC_012039.1 hypothetical protein 1452903 7411249 Cla_1503 Campylobacter lari RM2100 hypothetical protein YP_002576059.1 1452589 D 306263 CDS YP_002576060.1 222824486 7411250 complement(1452900..1454774) 1 NC_012039.1 Pfam match to PF00924.9 MS_channel; hypothetical protein 1454774 7411250 Cla_1504 Campylobacter lari RM2100 hypothetical protein YP_002576060.1 1452900 R 306263 CDS YP_002576061.1 222824487 7411251 complement(1454771..1455403) 1 NC_012039.1 Pfam match to PF00484.10 Pro_CA; carbonic anhydrase 1455403 cynT 7411251 cynT Campylobacter lari RM2100 carbonic anhydrase YP_002576061.1 1454771 R 306263 CDS YP_002576062.1 222824488 7411252 1455563..1456264 1 NC_012039.1 Pfam match to PF01027.11 UPF0005; hypothetical protein 1456264 7411252 Cla_1506 Campylobacter lari RM2100 hypothetical protein YP_002576062.1 1455563 D 306263 CDS YP_002576063.1 222824489 7411253 1456364..1456708 1 NC_012039.1 Pfam match to PF03840.5 SecG; preprotein translocase subunit SecG 1456708 secG 7411253 secG Campylobacter lari RM2100 preprotein translocase subunit SecG YP_002576063.1 1456364 D 306263 CDS YP_002576064.1 222824490 7411254 1456719..1457276 1 NC_012039.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1457276 frr 7411254 frr Campylobacter lari RM2100 ribosome recycling factor YP_002576064.1 1456719 D 306263 CDS YP_002576065.1 222824491 7411255 1457279..1457887 1 NC_012039.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 1457887 pyrE 7411255 pyrE Campylobacter lari RM2100 orotate phosphoribosyltransferase YP_002576065.1 1457279 D 306263 CDS YP_002576066.1 222824492 7411256 1457887..1458303 1 NC_012039.1 Pfam match to PF06271.3 RDD; hypothetical protein 1458303 7411256 Cla_1510 Campylobacter lari RM2100 hypothetical protein YP_002576066.1 1457887 D 306263 CDS YP_002576067.1 222824493 7411257 1458300..1459322 1 NC_012039.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 1459322 nrdF 7411257 nrdF Campylobacter lari RM2100 ribonucleotide-diphosphate reductase subunit beta YP_002576067.1 1458300 D 306263 CDS YP_002576068.1 222824494 7411258 1459624..1461141 1 NC_012039.1 Pfam match to PF02600.7 DsbB; disulfide bond formation protein, DsbB family 1461141 7411258 Cla_1512 Campylobacter lari RM2100 disulfide bond formation protein, DsbB family YP_002576068.1 1459624 D 306263 CDS YP_002576069.1 222824495 7411259 1461229..1461861 1 NC_012039.1 catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase 1461861 pcm 7411259 pcm Campylobacter lari RM2100 protein-L-isoaspartate O-methyltransferase YP_002576069.1 1461229 D 306263 CDS YP_002576070.1 222824496 7411260 1461952..1462692 1 NC_012039.1 Pfam match to PF00194.12 Carb_anhydrase; carbonic anhydrase 1462692 7411260 Cla_1514 Campylobacter lari RM2100 carbonic anhydrase YP_002576070.1 1461952 D 306263 CDS YP_002576071.1 222824497 7411261 complement(1462704..1463336) 1 NC_012039.1 hypothetical protein 1463336 7411261 Cla_1515 Campylobacter lari RM2100 hypothetical protein YP_002576071.1 1462704 R 306263 CDS YP_002576072.1 222824498 7411262 complement(1463336..1465144) 1 NC_012039.1 Pfam matches to PF00009.18 GTP_EFTU, and to PF03144.16 GTP_EFTU_D2; GTP-binding protein TypA 1465144 typA 7411262 typA Campylobacter lari RM2100 GTP-binding protein TypA YP_002576072.1 1463336 R 306263 CDS YP_002576073.1 222824499 7411263 1465272..1465610 1 NC_012039.1 hypothetical protein 1465610 7411263 Cla_1517 Campylobacter lari RM2100 hypothetical protein YP_002576073.1 1465272 D 306263 CDS YP_002576074.1 222824500 7411264 1465614..1467296 1 NC_012039.1 Pfam match to PF02120.7 Flg_hook; hypothetical protein 1467296 7411264 Cla_1518 Campylobacter lari RM2100 hypothetical protein YP_002576074.1 1465614 D 306263 CDS YP_002576075.1 222824501 7411265 1467347..1468354 1 NC_012039.1 Pfam match to PF03963.5 FlgD; flagellar hook assembly protein FlgD 1468354 flgD 7411265 flgD Campylobacter lari RM2100 flagellar hook assembly protein FlgD YP_002576075.1 1467347 D 306263 CDS YP_002576076.1 222824502 7411266 1468359..1469984 1 NC_012039.1 Pfam match to PF06429.4 DUF1078; flagellar hook protein FlgE 1469984 flgE2 7411266 flgE2 Campylobacter lari RM2100 flagellar hook protein FlgE YP_002576076.1 1468359 D 306263 CDS YP_002576077.1 222824503 7411267 complement(1469995..1470438) 1 NC_012039.1 hypothetical protein 1470438 7411267 Cla_1521 Campylobacter lari RM2100 hypothetical protein YP_002576077.1 1469995 R 306263 CDS YP_002576078.1 222824504 7411268 complement(1470591..1471817) 1 NC_012039.1 hypothetical protein 1471817 7411268 Cla_1522 Campylobacter lari RM2100 hypothetical protein YP_002576078.1 1470591 R 306263 CDS YP_002576079.1 222824505 7411269 complement(1471983..1472591) 1 NC_012039.1 Pfam match to PF02661.9 Fic; cell filamentation protein 1472591 fic 7411269 fic Campylobacter lari RM2100 cell filamentation protein YP_002576079.1 1471983 R 306263 CDS YP_002576080.1 222824506 7411270 complement(1472654..1473634) 1 NC_012039.1 Pfam match to PF00005.18 ABC_tran; ABC transporter ATP-binding protein 1473634 7411270 Cla_1524 Campylobacter lari RM2100 ABC transporter ATP-binding protein YP_002576080.1 1472654 R 306263 CDS YP_002576081.1 222824507 7411271 complement(1473637..1475217) 1 NC_012039.1 Pfam matches to PF00528.13 BPD_transp_1, and to PF00528.13 BPD_transp_1; ABC transporter permease 1475217 7411271 Cla_1525 Campylobacter lari RM2100 ABC transporter permease YP_002576081.1 1473637 R 306263 CDS YP_002576082.1 222824508 7411272 complement(1475235..1476239) 1 NC_012039.1 Pfam match to PF01547.16 SBP_bac_1; ABC transporter substrate-binding protein 1476239 7411272 Cla_1526 Campylobacter lari RM2100 ABC transporter substrate-binding protein YP_002576082.1 1475235 R 306263 CDS YP_002576083.1 222824509 7411273 1476429..1476857 1 NC_012039.1 Pfam match to PF00042.13 Globin; flavohemoprotein 1476857 7411273 Cla_1527 Campylobacter lari RM2100 flavohemoprotein YP_002576083.1 1476429 D 306263 CDS YP_002576084.1 222824510 7411274 complement(1476879..1478507) 1 NC_012039.1 efflux pump for the antibacterial peptide microcin J25; multidrug transporter membrane component/ATP-binding component 1478507 7411274 Cla_1528 Campylobacter lari RM2100 multidrug transporter membrane component/ATP-binding component YP_002576084.1 1476879 R 306263 CDS YP_002576085.1 222824511 7411276 1481415..1484672 1 NC_012039.1 Pfam match to PF05860.4 Haemagg_act; hemagglutination domain protein 1484672 7411276 Cla_1530 Campylobacter lari RM2100 hemagglutination domain protein YP_002576085.1 1481415 D 306263 CDS YP_002576086.1 222824512 7411277 1484741..1486534 1 NC_012039.1 hypothetical protein 1486534 7411277 Cla_1531 Campylobacter lari RM2100 hypothetical protein YP_002576086.1 1484741 D 306263 CDS YP_002576087.1 222824513 7411278 complement(1486531..1487103) 1 NC_012039.1 Pfam match to PF07963.3 N_methyl; transformation system protein CtsG 1487103 ctsG 7411278 ctsG Campylobacter lari RM2100 transformation system protein CtsG YP_002576087.1 1486531 R 306263 CDS YP_002576088.1 222824514 7411279 complement(1487100..1488107) 1 NC_012039.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 1488107 gcp 7411279 gcp Campylobacter lari RM2100 DNA-binding/iron metalloprotein/AP endonuclease YP_002576088.1 1487100 R 306263 CDS YP_002576089.1 222824515 7411280 complement(1488104..1489492) 1 NC_012039.1 hypothetical protein 1489492 7411280 Cla_1534 Campylobacter lari RM2100 hypothetical protein YP_002576089.1 1488104 R 306263 CDS YP_002576090.1 222824516 7411281 complement(1489489..1490568) 1 NC_012039.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1490568 dxr 7411281 dxr Campylobacter lari RM2100 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_002576090.1 1489489 R 306263 CDS YP_002576091.1 222824517 7411282 complement(1490565..1491293) 1 NC_012039.1 Pfam match to PF01148.11 CTP_transf_1; phosphatidate cytidylyltransferase 1491293 cdsA 7411282 cdsA Campylobacter lari RM2100 phosphatidate cytidylyltransferase YP_002576091.1 1490565 R 306263 CDS YP_002576092.1 222824518 7411283 complement(1491305..1491625) 1 NC_012039.1 hypothetical protein 1491625 7411283 Cla_1537 Campylobacter lari RM2100 hypothetical protein YP_002576092.1 1491305 R 306263 CDS YP_002576093.1 222824519 7411284 complement(1491628..1492932) 1 NC_012039.1 Pfam match to PF05670.4 DUF814; hypothetical protein 1492932 7411284 Cla_1538 Campylobacter lari RM2100 hypothetical protein YP_002576093.1 1491628 R 306263 CDS YP_002576094.1 222824520 7411285 1492974..1493552 1 NC_012039.1 molybdopterin-guanine dinucleotide biosynthesis protein A 1493552 mobA 7411285 mobA Campylobacter lari RM2100 molybdopterin-guanine dinucleotide biosynthesis protein A YP_002576094.1 1492974 D 306263 CDS YP_002576095.1 222824521 7411286 complement(1493571..1494923) 1 NC_012039.1 Pfam match to PF03553.5 Na_H_antiporter; Na+/H+ antiporter 1494923 7411286 Cla_1540 Campylobacter lari RM2100 Na+/H+ antiporter YP_002576095.1 1493571 R 306263 CDS YP_002576096.1 222824522 7411287 1495058..1496734 1 NC_012039.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 1496734 ilvD 7411287 ilvD Campylobacter lari RM2100 dihydroxy-acid dehydratase YP_002576096.1 1495058 D 306263 CDS YP_002576097.1 222824523 7411292 1497363..1499345 1 NC_012039.1 Pfam matches to PF02743.9 Cache_1, and to PF00015.12 MCPsignal; MCP-domain signal transduction protein 1499345 7411292 Cla_1546 Campylobacter lari RM2100 MCP-domain signal transduction protein YP_002576097.1 1497363 D 306263 CDS YP_002576098.1 222824524 7411293 1499476..1501449 1 NC_012039.1 Pfam match to PF00015.12 MCPsignal; MCP-domain signal transduction protein 1501449 7411293 Cla_1547 Campylobacter lari RM2100 MCP-domain signal transduction protein YP_002576098.1 1499476 D 306263 CDS YP_002576099.1 222824525 7411294 complement(1501484..1501903) 1 NC_012039.1 hypothetical protein 1501903 7411294 Cla_1548 Campylobacter lari RM2100 hypothetical protein YP_002576099.1 1501484 R 306263 CDS YP_002576100.1 222824526 7411295 complement(1501966..1503678) 1 NC_012039.1 Pfam match to PF00004.20 AAA; ATPase AAA 1503678 7411295 Cla_1549 Campylobacter lari RM2100 ATPase AAA YP_002576100.1 1501966 R 306263 CDS YP_002576101.1 222824527 7411296 complement(1503687..1504166) 1 NC_012039.1 hypothetical protein 1504166 7411296 Cla_1550 Campylobacter lari RM2100 hypothetical protein YP_002576101.1 1503687 R 306263 CDS YP_002576102.1 222824528 7411297 complement(1504163..1504654) 1 NC_012039.1 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein 1504654 7411297 Cla_1551 Campylobacter lari RM2100 nucleotide-binding protein YP_002576102.1 1504163 R 306263 CDS YP_002576103.1 222824529 7411298 complement(1504644..1505576) 1 NC_012039.1 Involved in the metabolism of aromatic amino acids; 2-hydroxyacid dehydrogenase 1505576 7411298 Cla_1552 Campylobacter lari RM2100 2-hydroxyacid dehydrogenase YP_002576103.1 1504644 R 306263 CDS YP_002576104.1 222824530 7411299 complement(1505576..1506748) 1 NC_012039.1 Pfam match to PF03738.5 GSP_synth; glutathionylspermidine synthase 1506748 7411299 Cla_1553 Campylobacter lari RM2100 glutathionylspermidine synthase YP_002576104.1 1505576 R 306263 CDS YP_002576105.1 222824531 7411300 complement(1506758..1507384) 1 NC_012039.1 hypothetical protein 1507384 7411300 Cla_1554 Campylobacter lari RM2100 hypothetical protein YP_002576105.1 1506758 R 306263 CDS YP_002576106.1 222824532 7411301 complement(1507457..1508062) 1 NC_012039.1 Pfam match to PF01810.9 LysE; LysE family amino-acid efflux protein 1508062 7411301 Cla_1555 Campylobacter lari RM2100 LysE family amino-acid efflux protein YP_002576106.1 1507457 R 306263 CDS YP_002576107.1 222824533 7411302 complement(1508107..1508331) 1 NC_012039.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1508331 rpsU 7411302 rpsU Campylobacter lari RM2100 30S ribosomal protein S21 YP_002576107.1 1508107 R 306263 CDS YP_002576108.1 222824534 7411303 1508505..1509881 1 NC_012039.1 ferredoxin-like protein 1509881 7411303 Cla_1557 Campylobacter lari RM2100 ferredoxin-like protein YP_002576108.1 1508505 D 306263 CDS YP_002576109.1 222824535 7411304 1509878..1510504 1 NC_012039.1 Pfam match to PF00440.14 TetR_N; TetR family transcriptional regulator 1510504 cmeR 7411304 cmeR Campylobacter lari RM2100 TetR family transcriptional regulator YP_002576109.1 1509878 D 306263 CDS YP_002576110.1 222824536 7411305 1510587..1511684 1 NC_012039.1 Pfam match to PF00529.11 HlyD; RND efflux system, membrane fusion protein CmeA 1511684 cmeA 7411305 cmeA Campylobacter lari RM2100 RND efflux system, membrane fusion protein CmeA YP_002576110.1 1510587 D 306263 CDS YP_002576111.1 222824537 7411306 1511684..1514806 1 NC_012039.1 Pfam match to PF00873.10 ACR_tran; RND efflux system, inner membrane transporter CmeB 1514806 cmeB 7411306 cmeB Campylobacter lari RM2100 RND efflux system, inner membrane transporter CmeB YP_002576111.1 1511684 D 306263 CDS YP_002576112.1 222824538 7411307 1514799..1516241 1 NC_012039.1 Pfam matches to PF02321.9 OEP, and to PF02321.9 OEP; RND efflux system, outer membrane lipoprotein CmeC 1516241 cmeC 7411307 cmeC Campylobacter lari RM2100 RND efflux system, outer membrane lipoprotein CmeC YP_002576112.1 1514799 D 306263 CDS YP_002576113.1 222824539 7411308 complement(1516258..1516479) 1 NC_012039.1 hypothetical protein 1516479 7411308 Cla_1562 Campylobacter lari RM2100 hypothetical protein YP_002576113.1 1516258 R 306263 CDS YP_002576114.1 222824540 7411132 1516527..1517858 1 NC_012039.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1517858 7411132 Cla_1563 Campylobacter lari RM2100 coproporphyrinogen III oxidase YP_002576114.1 1516527 D 306263 CDS YP_002576115.1 222824541 7411133 1517916..1518593 1 NC_012039.1 Pfam match to PF08241.3 Methyltransf_11; methyltransferase 1518593 7411133 Cla_1564 Campylobacter lari RM2100 methyltransferase YP_002576115.1 1517916 D 306263 CDS YP_002576116.1 222824542 7411134 complement(1518614..1519063) 1 NC_012039.1 Pfam match to PF03653.4 UPF0093; hypothetical protein 1519063 7411134 Cla_1565 Campylobacter lari RM2100 hypothetical protein YP_002576116.1 1518614 R 306263 CDS YP_002576117.1 222824543 7411135 complement(1519044..1519511) 1 NC_012039.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1519511 lspA 7411135 lspA Campylobacter lari RM2100 lipoprotein signal peptidase YP_002576117.1 1519044 R 306263 CDS YP_002576118.1 222824544 7411136 complement(1519504..1520841) 1 NC_012039.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 1520841 glmM 7411136 glmM Campylobacter lari RM2100 phosphoglucosamine mutase YP_002576118.1 1519504 R 306263 CDS YP_002576119.1 222824545 7411137 1520973..1522148 1 NC_012039.1 hypothetical protein 1522148 7411137 Cla_1568 Campylobacter lari RM2100 hypothetical protein YP_002576119.1 1520973 D 306263 CDS YP_002576120.1 222824546 7411138 1522145..1523335 1 NC_012039.1 Pfam match to PF00004.20 AAA; recombination factor protein RarA 1523335 7411138 Cla_1569 Campylobacter lari RM2100 recombination factor protein RarA YP_002576120.1 1522145 D 306263 CDS YP_002576121.1 222824547 7411140 complement(1523484..1524104) 1 NC_012039.1 Pfam matches to PF03713.4 DUF305, and to PF03713.4 DUF305; hypothetical protein 1524104 7411140 Cla_1571 Campylobacter lari RM2100 hypothetical protein YP_002576121.1 1523484 R 306263 CDS YP_002576122.1 222824548 7411141 1524226..1524858 1 NC_012039.1 hypothetical protein 1524858 7411141 Cla_1572 Campylobacter lari RM2100 hypothetical protein YP_002576122.1 1524226 D 306263 CDS YP_002576123.1 222824549 7411142 complement(1524861..1525337) 1 NC_012039.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 1525337 ruvC 7411142 ruvC Campylobacter lari RM2100 Holliday junction resolvase YP_002576123.1 1524861 R 306263 CDS YP_002576124.1 222778529 7409819 join(45672..46201,1) 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein Cpp18; hypothetical protein 46201 7409819 Cla_a042 Campylobacter lari RM2100 hypothetical protein YP_002576124.1 1 D 306263 CDS YP_002576125.1 222778488 7409818 1..1317 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein Cpp17 Pfam match to PF03432.5 Relaxase; nickase/relaxase 1317 7409818 Cla_a001 Campylobacter lari RM2100 nickase/relaxase YP_002576125.1 1 D 306263 CDS YP_002576126.1 222778489 7409778 complement(1391..7195) 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein Cpp14 Pfam matches to PF02384.7 N6_Mtase, and to PF00176.14 SNF2_N; DNA methylase/helicase 7195 7409778 Cla_a002 Campylobacter lari RM2100 DNA methylase/helicase YP_002576126.1 1391 R 306263 CDS YP_002576127.1 222778490 7409779 complement(7383..7985) 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein Cpp27 Pfam match to PF00239.12 Resolvase; site-specific recombinase/resolvase 7985 7409779 Cla_a003 Campylobacter lari RM2100 site-specific recombinase/resolvase YP_002576127.1 7383 R 306263 CDS YP_002576128.1 222778491 7409780 complement(8107..8331) 1 NC_012040.1 hypothetical protein 8331 7409780 Cla_a004 Campylobacter lari RM2100 hypothetical protein YP_002576128.1 8107 R 306263 CDS YP_002576129.1 222778492 7409781 complement(8336..9004) 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pVir protein Cjp26 Pfam match to PF01656.14 CbiA; plasmid partitioning protein 9004 7409781 Cla_a005 Campylobacter lari RM2100 plasmid partitioning protein YP_002576129.1 8336 R 306263 CDS YP_002576130.1 222778493 7409782 complement(9272..10090) 1 NC_012040.1 hypothetical protein 10090 7409782 Cla_a006 Campylobacter lari RM2100 hypothetical protein YP_002576130.1 9272 R 306263 CDS YP_002576131.1 222778494 7409783 complement(10559..10894) 1 NC_012040.1 hypothetical protein 10894 7409783 Cla_a007 Campylobacter lari RM2100 hypothetical protein YP_002576131.1 10559 R 306263 CDS YP_002576132.1 222778495 7409784 11349..11609 1 NC_012040.1 Pfam match to PF04956.4 TrbC; attachment mediating protein TraC/VirB2 11609 7409784 Cla_a008 Campylobacter lari RM2100 attachment mediating protein TraC/VirB2 YP_002576132.1 11349 D 306263 CDS YP_002576133.1 222778496 7409785 11616..14390 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein CmgB3/4 Pfam matches to PF05101.4 VirB3, and to PF03135.5 CagE_TrbE_VirB; secretion/conjugal transfer ATPase VirB3/4 14390 7409785 Cla_a009 Campylobacter lari RM2100 secretion/conjugal transfer ATPase VirB3/4 YP_002576133.1 11616 D 306263 CDS YP_002576134.1 222778497 7409786 14387..15379 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein CmgB5 Pfam match to PF07996.2 T4SS; conjugal transfer protein VirB5 15379 7409786 Cla_a010 Campylobacter lari RM2100 conjugal transfer protein VirB5 YP_002576134.1 14387 D 306263 CDS YP_002576135.1 222778498 7409787 15393..15977 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein Cpp32 Pfam match to PF09669.1 Phage_pRha; putative antirepressor, Rha family 15977 7409787 Cla_a011 Campylobacter lari RM2100 putative antirepressor, Rha family YP_002576135.1 15393 D 306263 CDS YP_002576136.1 222778499 7409788 16476..16769 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein Cpp33; hypothetical protein 16769 7409788 Cla_a012 Campylobacter lari RM2100 hypothetical protein YP_002576136.1 16476 D 306263 CDS YP_002576137.1 222778500 7409789 16766..17317 1 NC_012040.1 Pfam match to PF02498.8 Bro-N; putative antirepressor, BRO family 17317 7409789 Cla_a013 Campylobacter lari RM2100 putative antirepressor, BRO family YP_002576137.1 16766 D 306263 CDS YP_002576138.1 222778501 7409790 17607..18617 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein CmgB6 Pfam match to PF04610.5 TrbL; conjugal transfer protein TrbL/VirB6 18617 7409790 Cla_a014 Campylobacter lari RM2100 conjugal transfer protein TrbL/VirB6 YP_002576138.1 17607 D 306263 CDS YP_002576139.1 222778502 7409791 18607..19068 1 NC_012040.1 hypothetical protein 19068 7409791 Cla_a015 Campylobacter lari RM2100 hypothetical protein YP_002576139.1 18607 D 306263 CDS YP_002576140.1 222778503 7409792 19359..19967 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein CmgB8 Pfam match to PF04335.4 VirB8; conjugal transfer protein TraJ/VirB8 19967 7409792 Cla_a016 Campylobacter lari RM2100 conjugal transfer protein TraJ/VirB8 YP_002576140.1 19359 D 306263 CDS YP_002576141.1 222778504 7409793 19964..20899 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein CmgB9 Pfam match to PF03524.6 CagX; conjugal transfer protein TraK/VirB9 20899 7409793 Cla_a017 Campylobacter lari RM2100 conjugal transfer protein TraK/VirB9 YP_002576141.1 19964 D 306263 CDS YP_002576142.1 222778505 7409794 20896..22071 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein CmgB10 Pfam match to PF03743.5 TrbI; conjugal transfer protein TrbI/VirB10 22071 7409794 Cla_a018 Campylobacter lari RM2100 conjugal transfer protein TrbI/VirB10 YP_002576142.1 20896 D 306263 CDS YP_002576143.1 222778506 7409795 22071..23072 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein CmgB11 Pfam match to PF00437.11 GSPII_E; conjugal transfer protein VirB11 23072 7409795 Cla_a019 Campylobacter lari RM2100 conjugal transfer protein VirB11 YP_002576143.1 22071 D 306263 CDS YP_002576144.1 222778507 7409796 23062..23637 1 NC_012040.1 hypothetical protein 23637 7409796 Cla_a020 Campylobacter lari RM2100 hypothetical protein YP_002576144.1 23062 D 306263 CDS YP_002576145.1 222778508 7409797 23627..25423 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein CmgD4 Pfam match to PF02534.5 TraG; conjugal transfer protein TraG/VirD4 25423 7409797 Cla_a021 Campylobacter lari RM2100 conjugal transfer protein TraG/VirD4 YP_002576145.1 23627 D 306263 CDS YP_002576146.1 222778509 7409798 25407..25844 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein Cpp44; hypothetical protein 25844 7409798 Cla_a022 Campylobacter lari RM2100 hypothetical protein YP_002576146.1 25407 D 306263 CDS YP_002576147.1 222778510 7409799 25965..26642 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein Cpp45 Pfam match to PF07424.2 TrbM; TrbM mating pair formation protein-like protein 26642 7409799 Cla_a023 Campylobacter lari RM2100 TrbM mating pair formation protein-like protein YP_002576147.1 25965 D 306263 CDS YP_002576148.1 222778511 7409800 26635..27504 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein Cpp46; hypothetical protein 27504 7409800 Cla_a024 Campylobacter lari RM2100 hypothetical protein YP_002576148.1 26635 D 306263 CDS YP_002576149.1 222778512 7409801 27588..28256 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein Cpp47; hypothetical protein 28256 7409801 Cla_a025 Campylobacter lari RM2100 hypothetical protein YP_002576149.1 27588 D 306263 CDS YP_002576150.1 222778513 7409802 28310..30340 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein Cpp49 Pfam matches to PF01751.13 Toprim, and to PF01131.11 Topoisom_bac; DNA topoisomerase III TraE 30340 7409802 Cla_a026 Campylobacter lari RM2100 DNA topoisomerase III TraE YP_002576150.1 28310 D 306263 CDS YP_002576151.1 222778514 7409803 30353..30763 1 NC_012040.1 Pfam match to PF00436.16 SSB; single-stranded DNA binding protein 30763 7409803 Cla_a027 Campylobacter lari RM2100 single-stranded DNA binding protein YP_002576151.1 30353 D 306263 CDS YP_002576152.1 222778515 7409804 30763..35142 1 NC_012040.1 putative adhesin/invasin 35142 7409804 Cla_a028 Campylobacter lari RM2100 putative adhesin/invasin YP_002576152.1 30763 D 306263 CDS YP_002576153.1 222778516 7409805 complement(35238..35627) 1 NC_012040.1 hypothetical protein 35627 7409805 Cla_a029 Campylobacter lari RM2100 hypothetical protein YP_002576153.1 35238 R 306263 CDS YP_002576154.1 222778517 7409806 complement(35704..36192) 1 NC_012040.1 hypothetical protein 36192 7409806 Cla_a030 Campylobacter lari RM2100 hypothetical protein YP_002576154.1 35704 R 306263 CDS YP_002576155.1 222778518 7409807 36974..37609 1 NC_012040.1 Pfam match to PF00239.12 Resolvase; site-specific recombinase/resolvase 37609 7409807 Cla_a031 Campylobacter lari RM2100 site-specific recombinase/resolvase YP_002576155.1 36974 D 306263 CDS YP_002576156.1 222778519 7409808 37764..38405 1 NC_012040.1 putative DNA primase TraC 38405 7409808 Cla_a032 Campylobacter lari RM2100 putative DNA primase TraC YP_002576156.1 37764 D 306263 CDS YP_002576157.1 222778520 7409809 38494..38802 1 NC_012040.1 hypothetical protein 38802 7409809 Cla_a033 Campylobacter lari RM2100 hypothetical protein YP_002576157.1 38494 D 306263 CDS YP_002576158.1 222778521 7409810 complement(38950..40185) 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein Cpp22 Pfam match to PF01751.13 Toprim; DNA primase TraC 40185 7409810 Cla_a034 Campylobacter lari RM2100 DNA primase TraC YP_002576158.1 38950 R 306263 CDS YP_002576159.1 222778522 7409811 complement(40274..40933) 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein Cpp21; hypothetical protein 40933 7409811 Cla_a035 Campylobacter lari RM2100 hypothetical protein YP_002576159.1 40274 R 306263 CDS YP_002576160.1 222778523 7409812 complement(40992..41405) 1 NC_012040.1 Pfam match to PF01850.12 PIN; PIN domain protein 41405 7409812 Cla_a036 Campylobacter lari RM2100 PIN domain protein YP_002576160.1 40992 R 306263 CDS YP_002576161.1 222778524 7409813 complement(41402..42301) 1 NC_012040.1 hypothetical protein 42301 7409813 Cla_a037 Campylobacter lari RM2100 hypothetical protein YP_002576161.1 41402 R 306263 CDS YP_002576162.1 222778525 7409814 42863..43171 1 NC_012040.1 identical to Cla_a033; hypothetical protein 43171 7409814 Cla_a038 Campylobacter lari RM2100 hypothetical protein YP_002576162.1 42863 D 306263 CDS YP_002576163.1 222778526 7409815 complement(43319..44392) 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein Cpp22 Pfam match to PF01751.13 Toprim; DNA primase TraC 44392 7409815 Cla_a039 Campylobacter lari RM2100 DNA primase TraC YP_002576163.1 43319 R 306263 CDS YP_002576164.1 222778527 7409816 complement(44411..45121) 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein Cpp20; hypothetical protein 45121 7409816 Cla_a040 Campylobacter lari RM2100 hypothetical protein YP_002576164.1 44411 R 306263 CDS YP_002576165.1 222778528 7409817 complement(45193..45465) 1 NC_012040.1 similar to Campylobacter jejuni 81-176 pTet protein Cpp19; hypothetical protein 45465 7409817 Cla_a041 Campylobacter lari RM2100 hypothetical protein YP_002576165.1 45193 R 306263 CDS