-- dump date   	20111121_011115
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_001798717.1	paralog group containing: PA0008, PA0009
YP_001798718.1	paralog group containing: PA0008, PA0009
YP_001798725.1	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)
YP_001798727.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
YP_001798733.1	catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001798736.1	paralog group containing: PA0037,PA0073, PA0193, PA0210, PA0225, PA0255,PA0326, PA0371, PA0427, PA0428, PA0429,PA0732, PA0809
YP_001798737.1	paralog group containing: PA0038,PA0072, PA0194, PA0209, PA0226, PA0325,PA0372, PA0426, PA0430, PA0733, PA0734,PA0808
YP_001798738.1	paralog group containing: PA0039,PA0071, PA0195, PA0227, PA0324, PA0373,PA0425, PA0431, PA0735, PA0807
YP_001798739.1	paralog group containing: PA0040,PA0196, PA0228, PA0323, PA0374, PA0424,PA0736, PA0806
YP_001798740.1	paralog group containing: PA0041,PA0248, PA0375, PA0737
YP_001798741.1	paralog group containing: PA0042,PA0070, PA0198, PA0230, PA0247, PA0321,PA0376, PA0422, PA0432, PA0738, PA0804 bacteriophage similarities
YP_001798742.1	paralog group containing: PA0043,PA0069, PA0199, PA0231, PA0320, PA0327,PA0377, PA400, PA0421, PA0433, PA0739,PA0778, PA0803
YP_001798743.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001798744.1	paralog group containing: PA0046, PA0201, PA0207, PA0233, PA0244,PA0331, PA0335, PA0379, PA0391, PA0396,PA0419, PA0435, PA0741, PA0801
YP_001798745.1	paralog group containing PA0047, PA0192,PA0202, PA0234, PA0243, PA0336, PA0380,PA0390, PA0418, PA0436, PA0742, PA0800
YP_001798746.1	paralog group containing: PA0048,PA0068, PA0190, PA0191, PA0203, PA0235,PA0284, PA0381, PA0417, PA0437,PA0743, PA0744, PA0799
YP_001798750.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
YP_001798751.1	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
YP_001798754.1	paralog group containing: PA0028,PA0029, PA0053, PA0054, PA0063, PA0183,PA0184, PA0206, PA0239, PA0240, PA0264,PA0265, PA0275, PA0281, PA0282, PA0384,PA0412, PA0413, PA0443, PA0444, PA0462,PA0466, PA0750, PA0751, PA0796 Bacteriophage similarities Found in transposase IS30 (Interpro) IS3 family and IS150 group (IS finder)
YP_001798755.1	paralog group containing: PA0064,PA0185, PA0467
YP_001798756.1	paralog group containing: PA0031,PA0035, PA0051, PA0052, PA0065, PA0186,PA0205, PA0238, PA0261, PA0262, PA0277,PA0278, PA0286, PA0287, PA0383, PA0414,PA0415, PA468, PA0470, PA0472, PA0749,PA0797
YP_001798757.1	paralog group containing: PA0048,PA0068, PA0190, PA0191, PA0203, PA0235,PA0284, PA0381, PA0417, PA0437,PA0743, PA0744, PA0799
YP_001798758.1	paralog group containing: PA0043,PA0069, PA0199, PA0231, PA0320, PA0327,PA0377, PA400, PA0421, PA0433, PA0739,PA0778, PA0803
YP_001798759.1	paralog group containing: PA0042,PA0070, PA0198, PA0230, PA0247, PA0321,PA0376, PA0422, PA0432, PA0738, PA0804
YP_001798760.1	paralog group containing: PA0039,PA0071, PA0195, PA0227, PA0324, PA0373,PA0425, PA0431, PA0735, PA0807
YP_001798761.1	paralog group containing: PA0037,PA0073, PA0193, PA0210, PA0225, PA0255,PA0326, PA0371, PA0427, PA0428, PA0429,PA0732, PA0809
YP_001798767.1	ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived
YP_001798771.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
YP_001798776.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
YP_001798780.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
YP_001798783.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
YP_001798784.1	Essential for recycling GMP and indirectly, cGMP
YP_001798787.1	paralog group containing: PA0109, PA0727
YP_001798790.1	B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE
YP_001798799.1	AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA
YP_001798804.1	paralog group containing: PA0078,PA0079, PA0126, PA0290, PA0351, PA0441,PA0620, PA0657, PA0658, PA0719, PA0720,PA0787, PA0788, PA0811 Found in transposase IS30 (interpro) IS3/IS150 group (IS finder)
YP_001798805.1	paralog group containing: PA0127, PA0258
YP_001798806.1	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content
YP_001798820.1	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain
YP_001798821.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
YP_001798828.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_001798830.1	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
YP_001798844.1	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family
YP_001798848.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
YP_001798850.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_001798860.1	paralog group containing: PA0064,PA0185, PA0467
YP_001798861.1	paralog group containing: PA0031,PA0035, PA0051, PA0052, PA0065, PA0186,PA0205, PA0238, PA0261, PA0262, PA0277,PA0278, PA0286, PA0287, PA0383, PA0414,PA0415, PA468, PA0470, PA0472, PA0749,PA0797
YP_001798862.1	paralog group containing PA0047, PA0192,PA0202, PA0234, PA0243, PA0336, PA0380,PA0390, PA0418, PA0436, PA0742, PA0800
YP_001798863.1	paralog group containing: PA0037,PA0073, PA0193, PA0210, PA0225, PA0255,PA0326, PA0371, PA0427, PA0428, PA0429,PA0732, PA0809
YP_001798864.1	paralog group containing: PA0038,PA0072, PA0194, PA0209, PA0226, PA0325,PA0372, PA0426, PA0430, PA0733, PA0734,PA0808
YP_001798865.1	paralog group containing: PA0039,PA0071, PA0195, PA0227, PA0324, PA0373,PA0425, PA0431, PA0735, PA0807
YP_001798866.1	paralog group containing: PA0040,PA0196, PA0228, PA0323, PA0374, PA0424,PA0736, PA0806
YP_001798867.1	paralog group containing: PA0197,PA0229, PA0322, PA0423, PA0805
YP_001798868.1	paralog group containing: PA0042,PA0070, PA0198, PA0230, PA0247, PA0321,PA0376, PA0422, PA0432, PA0738, PA0804
YP_001798869.1	paralog group containing: PA0043,PA0069, PA0199, PA0231, PA0320, PA0327,PA0377, PA400, PA0421, PA0433, PA0739,PA0778, PA0803
YP_001798870.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001798871.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001798872.1	paralog group containing PA0047, PA0192,PA0202, PA0234, PA0243, PA0336, PA0380,PA0390, PA0418, PA0436, PA0742, PA0800
YP_001798873.1	paralog group containing: PA0048,PA0068, PA0190, PA0191, PA0203, PA0235,PA0284, PA0381, PA0417, PA0437,PA0743, PA0744, PA0799
YP_001798874.1	paralog group containing: PA0036,PA0049, PA0050, PA0066, PA0067, PA0187,PA0188, PA0189, PA0204, PA0236, PA0237,PA0260, PA0279, PA0280, PA0285, PA0382,PA0416, PA0473, PA0745, PA0746, PA0747,PA0798
YP_001798875.1	paralog group containing: PA0031,PA0035, PA0051, PA0052, PA0065, PA0186,PA0205, PA0238, PA0261, PA0262, PA0277,PA0278, PA0286, PA0287, PA0383, PA0414,PA0415, PA468, PA0470, PA0472, PA0749,PA0797
YP_001798876.1	paralog group containing: PA0028,PA0029, PA0053, PA0054, PA0063, PA0183,PA0184, PA0206, PA0239, PA0240, PA0264,PA0265, PA0275, PA0281, PA0282, PA0384,PA0412, PA0413, PA0443, PA0444, PA0462,PA0466, PA0750, PA0751, PA0796 Bacteriophage similarities Found in transposase IS30 (Interpro) IS3 family/IS150 group (IS finder)
YP_001798877.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001798878.1	paralog group containing: PA0037,PA0073, PA0193, PA0210, PA0225, PA0255,PA0326, PA0371, PA0427, PA0428, PA0429,PA0732, PA0809
YP_001798888.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
YP_001798891.1	paralog group containing: PA0037,PA0073, PA0193, PA0210, PA0225, PA0255,PA0326, PA0371, PA0427, PA0428, PA0429,PA0732, PA0809
YP_001798892.1	paralog group containing: PA0038,PA0072, PA0194, PA0209, PA0226, PA0325,PA0372, PA0426, PA0430, PA0733, PA0734,PA0808
YP_001798893.1	paralog group containing: PA0039,PA0071, PA0195, PA0227, PA0324, PA0373,PA0425, PA0431, PA0735, PA0807
YP_001798894.1	paralog group containing: PA0040,PA0196, PA0228, PA0323, PA0374, PA0424,PA0736, PA0806
YP_001798895.1	paralog group containing: PA0197,PA0229, PA0322, PA0423, PA0805
YP_001798896.1	paralog group containing: PA0042,PA0070, PA0198, PA0230, PA0247, PA0321,PA0376, PA0422, PA0432, PA0738, PA0804
YP_001798897.1	paralog group containing: PA0043,PA0069, PA0199, PA0231, PA0320, PA0327,PA0377, PA400, PA0421, PA0433, PA0739,PA0778, PA0803
YP_001798898.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001798899.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001798900.1	paralog group containing PA0047, PA0192,PA0202, PA0234, PA0243, PA0336, PA0380,PA0390, PA0418, PA0436, PA0742, PA0800
YP_001798901.1	paralog group containing: PA0048,PA0068, PA0190, PA0191, PA0203, PA0235,PA0284, PA0381, PA0417, PA0437,PA0743, PA0744, PA0799
YP_001798902.1	paralog group containing: PA0031,PA0035, PA0051, PA0052, PA0065, PA0186,PA0205, PA0238, PA0261, PA0262, PA0277,PA0278, PA0286, PA0287, PA0383, PA0414,PA0415, PA468, PA0470, PA0472, PA0749,PA0797
YP_001798905.1	paralog group containing PA0047, PA0192,PA0202, PA0234, PA0243, PA0336, PA0380,PA0390, PA0418, PA0436, PA0742, PA0800
YP_001798906.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001798907.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001798908.1	paralog group containing: PA0044,PA0246, PA0251
YP_001798909.1	paralog group containing: PA0041,PA0248, PA0375, PA0737
YP_001798912.1	paralog group containing: PA0044,PA0246, PA0251
YP_001798914.1	paralog group containing: PA0037,PA0073, PA0193, PA0210, PA0225, PA0255,PA0326, PA0371, PA0427, PA0428, PA0429,PA0732, PA0809
YP_001798916.1	paralog group containing: PA0127, PA0258
YP_001798923.1	stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus
YP_001798924.1	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin
YP_001798928.1	paralog group containing: PA0283, PA0461
YP_001798930.1	paralog group containing: PA0253,PA0291, PA0352, PA0353, PA0621, PA0789,PA0810
YP_001798931.1	paralog group containing: PA0292,PA0354, PA0656, PA0721
YP_001798932.1	paralog group containing: PA0298, PA0357
YP_001798934.1	paralog group containing: PA0362, PA0303
YP_001798935.1	paralog group containing: PA0304, PA0365
YP_001798936.1	paralog group containing: PA0305,PA0366, PA459
YP_001798940.1	paralog group containing: PA0313,PA0333, PA0393
YP_001798942.1	paralog group containing: PA0316,PA0409, PA0723, PA0790, PA0815
YP_001798943.1	paralog group containing: PA0317,PA0408, PA0724, PA0791, PA0814
YP_001798944.1	paralog group containing: PA0318,PA0407, PA0659, PA0792, PA0813
YP_001798945.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001798946.1	paralog group containing: PA0043,PA0069, PA0199, PA0231, PA0320, PA0327,PA0377, PA400, PA0421, PA0433, PA0739,PA0778, PA0803
YP_001798947.1	paralog group containing: PA0042,PA0070, PA0198, PA0230, PA0247, PA0321,PA0376, PA0422, PA0432, PA0738, PA0804
YP_001798948.1	paralog group containing: PA0197,PA0229, PA0322, PA0423, PA0805
YP_001798949.1	paralog group containing: PA0040,PA0196, PA0228, PA0323, PA0374, PA0424,PA0736, PA0806
YP_001798950.1	paralog group containing: PA0039,PA0071, PA0195, PA0227, PA0324, PA0373,PA0425, PA0431, PA0735, PA0807
YP_001798951.1	paralog group containing: PA0038,PA0072, PA0194, PA0209, PA0226, PA0325,PA0372, PA0426, PA0430, PA0733, PA0734,PA0808
YP_001798952.1	paralog group containing: PA0037,PA0073, PA0193, PA0210, PA0225, PA0255,PA0326, PA0371, PA0427, PA0428, PA0429,PA0732, PA0809
YP_001798953.1	paralog group containing: PA0043,PA0069, PA0199, PA0231, PA0320, PA0327,PA0377, PA400, PA0421, PA0433, PA0739,PA0778, PA0803
YP_001798954.1	paralog group containing: PA0254,PA0328, PA0399
YP_001798955.1	paralog group containing: PA0329, PA0398
YP_001798956.1	paralog group containing: PA0330, PA0397
YP_001798957.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001798958.1	paralog group containing: PA0311,PA0332, PA0394
YP_001798959.1	paralog group containing: PA0313,PA0333, PA0393
YP_001798960.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001798961.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001798962.1	paralog group containing PA0047, PA0192,PA0202, PA0234, PA0243, PA0336, PA0380,PA0390, PA0418, PA0436, PA0742, PA0800
YP_001798963.1	paralog group containing: PA0337, PA0389
YP_001798965.1	paralog group containing: PA0339, PA0386,PA0387, PA0411
YP_001798967.1	paralog group containing: PA0344, PA0445
YP_001798969.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme
YP_001798970.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
YP_001798974.1	paralog group containing: PA0078,PA0079, PA0126, PA0290, PA0351, PA0441,PA0620, PA0657, PA0658, PA0719, PA0720,PA0787, PA0788, PA0811 Phage BP-4795 similarity (nleA type III effector protein) Found in transposase IS30 (Interpro) IS3/IS150 (IS finder)
YP_001798975.1	paralog group containing: PA0292,PA0354, PA0656, PA0721
YP_001798977.1	paralog group containing: AP0298, PA0357
YP_001798980.1	paralog group containing: PA0300, PA0360
YP_001798981.1	paralog group containing: PA0301,PA0302, PA0361
YP_001798982.1	paralog group containing: PA0362, PA0303
YP_001798985.1	paralog group containing: PA0304, PA0365
YP_001798986.1	paralog group containing: PA0305,PA0366, PA459
YP_001798988.1	paralog group containing: PA0037,PA0073, PA0193, PA0210, PA0225, PA0255,PA0326, PA0371, PA0427, PA0428, PA0429,PA0732, PA0809
YP_001798989.1	paralog group containing: PA0038,PA0072, PA0194, PA0209, PA0226, PA0325,PA0372, PA0426, PA0430, PA0733, PA0734,PA0808
YP_001798990.1	paralog group containing: PA0039,PA0071, PA0195, PA0227, PA0324, PA0373,PA0425, PA0431, PA0735, PA0807
YP_001798991.1	paralog group containing: PA0040,PA0196, PA0228, PA0323, PA0374, PA0424,PA0736, PA0806
YP_001798992.1	paralog group containing: PA0041,PA0248, PA0375, PA0737
YP_001798993.1	paralog group containing: PA0042,PA0070, PA0198, PA0230, PA0247, PA0321,PA0376, PA0422, PA0432, PA0738, PA0804
YP_001798994.1	paralog group containing: PA0043,PA0069, PA0199, PA0231, PA0320, PA0327,PA0377, PA400, PA0421, PA0433, PA0739,PA0778, PA0803
YP_001798995.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001798996.1	paralog group containing PA0047, PA0192,PA0202, PA0234, PA0243, PA0336, PA0380,PA0390, PA0418, PA0436, PA0742, PA0800
YP_001798997.1	paralog group containing: PA0048,PA0068, PA0190, PA0191, PA0203, PA0235,PA0284, PA0381, PA0417, PA0437,PA0743, PA0744, PA0799
YP_001798998.1	paralog group containing: PA0036,PA0049, PA0050, PA0066, PA0067, PA0187,PA0188, PA0189, PA0204, PA0236, PA0237,PA0260, PA0279, PA0280, PA0285, PA0382,PA0416, PA0473, PA0745, PA0746, PA0747,PA0798
YP_001798999.1	paralog group containing: PA0031,PA0035, PA0051, PA0052, PA0065, PA0186,PA0205, PA0238, PA0261, PA0262, PA0277,PA0278, PA0286, PA0287, PA0383, PA0414,PA0415, PA468, PA0470, PA0472, PA0749,PA0797
YP_001799000.1	paralog group containing: PA0028,PA0029, PA0053, PA0054, PA0063, PA0183,PA0184, PA0206, PA0239, PA0240, PA0264,PA0265, PA0275, PA0281, PA0282, PA0384,PA0412, PA0413, PA0443, PA0444, PA0462,PA0466, PA0750, PA0751, PA0796 bacteriophage similarities Found in transposase IS30 (interpro) IS3 family/IS150 group (IS finder)
YP_001799001.1	paralog group containing: P0315, P0A341,PA342, PA0385, PA0647
YP_001799002.1	paralog group containing: PA0388, PA0410
YP_001799003.1	paralog group containing: PA0337, PA0389
YP_001799004.1	paralog group containing PA0047, PA0192,PA0202, PA0234, PA0243, PA0336, PA0380,PA0390, PA0418, PA0436, PA0742, PA0800
YP_001799005.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001799006.1	paralog group containing: PA0313,PA0333, PA0393
YP_001799007.1	paralog group containing: PA0311,PA0332, PA0394
YP_001799009.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001799010.1	paralog group containing: PA0330, PA0397
YP_001799011.1	paralog group containing: PA0329, PA0398
YP_001799012.1	paralog group containing: PA0254,PA0328, PA0399
YP_001799015.1	paralog group containing: PA403, PA0795
YP_001799016.1	paralog group containing: PA0404, PA0794
YP_001799017.1	paralog group containing: PA0405, PA0793
YP_001799018.1	paralog group containing: PA0406, PA0812
YP_001799019.1	paralog group containing: PA0318,PA0407, PA0659, PA0792, PA0813
YP_001799020.1	paralog group containing: PA0317,PA0408, PA0724, PA0791, PA0814
YP_001799021.1	paralog group containing: PA0316,PA0409, PA0723, PA0790, PA0815
YP_001799022.1	paralog group containing: PA0388, PA0410
YP_001799023.1	paralog group containing: PA0036,PA0049, PA0050, PA0066, PA0067, PA0187,PA0188, PA0189, PA0204, PA0236, PA0237,PA0260, PA0279, PA0280, PA0285, PA0382,PA0416, PA0473, PA0745, PA0746, PA0747,PA0798
YP_001799024.1	paralog group containing: PA0048,PA0068, PA0190, PA0191, PA0203, PA0235,PA0284, PA0381, PA0417, PA0437,PA0743, PA0744, PA0799
YP_001799025.1	paralog group containing PA0047, PA0192,PA0202, PA0234, PA0243, PA0336, PA0380,PA0390, PA0418, PA0436, PA0742, PA0800
YP_001799026.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001799027.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001799028.1	paralog group containing: PA0043,PA0069, PA0199, PA0231, PA0320, PA0327,PA0377, PA400, PA0421, PA0433, PA0739,PA0778, PA0803
YP_001799029.1	paralog group containing: PA0042,PA0070, PA0198, PA0230, PA0247, PA0321,PA0376, PA0422, PA0432, PA0738, PA0804
YP_001799030.1	paralog group containing: PA0197,PA0229, PA0322, PA0423, PA0805
YP_001799031.1	paralog group containing: PA0040,PA0196, PA0228, PA0323, PA0374, PA0424,PA0736, PA0806
YP_001799032.1	paralog group containing: PA0039,PA0071, PA0195, PA0227, PA0324, PA0373,PA0425, PA0431, PA0735, PA0807
YP_001799033.1	paralog group containing: PA0038,PA0072, PA0194, PA0209, PA0226, PA0325,PA0372, PA0426, PA0430, PA0733, PA0734,PA0808
YP_001799034.1	paralog group containing: PA0038,PA0072, PA0194, PA0209, PA0226, PA0325,PA0372, PA0426, PA0430, PA0733, PA0734,PA0808
YP_001799035.1	paralog group containing: PA0039,PA0071, PA0195, PA0227, PA0324, PA0373,PA0425, PA0431, PA0735, PA0807
YP_001799036.1	paralog group containing: PA0042,PA0070, PA0198, PA0230, PA0247, PA0321,PA0376, PA0422, PA0432, PA0738, PA0804
YP_001799037.1	paralog group containing: PA0043,PA0069, PA0199, PA0231, PA0320, PA0327,PA0377, PA400, PA0421, PA0433, PA0739,PA0778, PA0803
YP_001799038.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001799039.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001799040.1	paralog group containing PA0047, PA0192,PA0202, PA0234, PA0243, PA0336, PA0380,PA0390, PA0418, PA0436, PA0742, PA0800
YP_001799044.1	paralog group containing: PA0075,PA0076, PA0077, PA0306, PA0307, PA0308,PA0367, PA0368, PA0442, PA0652, PA0786,PA0728
YP_001799045.1	paralog group containing: PA0344, PA0445
YP_001799051.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
YP_001799052.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
YP_001799059.1	paralog group containing: PA0283, PA0461
YP_001799060.1	paralog group containing: PA0064,PA0185, PA0467
YP_001799062.1	paralog group containing PA0032,PA0033, PA0034, PA0100, PA0101, PA0102,PA0103, PA0182, PA0211, PA212, PA259,PA0295, PA296, PA0463, PA0464, PA0465,PA0471, PA0622
YP_001799071.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
YP_001799072.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
YP_001799080.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
YP_001799082.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
YP_001799083.1	forms a direct contact with the tRNA during translation
YP_001799084.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
YP_001799092.1	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
YP_001799094.1	similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function
YP_001799095.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001799097.1	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway
YP_001799100.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
YP_001799102.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
YP_001799103.1	Catalyzes the phosphorylation of UMP to UDP
YP_001799104.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
YP_001799105.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
YP_001799107.1	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
YP_001799117.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
YP_001799132.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
YP_001799133.1	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
YP_001799134.1	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity
YP_001799136.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins
YP_001799140.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
YP_001799144.1	is a component of the macrolide binding site in the peptidyl transferase center
YP_001799145.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_001799146.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
YP_001799147.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
YP_001799148.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif
YP_001799149.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
YP_001799152.1	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase
YP_001799153.1	late assembly protein
YP_001799154.1	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7
YP_001799155.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
YP_001799156.1	binds 5S rRNA along with protein L5 and L25
YP_001799157.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
YP_001799158.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
YP_001799159.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif
YP_001799160.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
YP_001799161.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_001799162.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
YP_001799163.1	primary binding protein; helps mediate assembly; involved in translation fidelity
YP_001799165.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
YP_001799166.1	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation
YP_001799167.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
YP_001799168.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
YP_001799169.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_001799170.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
YP_001799171.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
YP_001799172.1	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
YP_001799173.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
YP_001799174.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
YP_001799176.1	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication
YP_001799177.1	involved in the peptidyltransferase reaction during translation
YP_001799181.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001799184.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase
YP_001799186.1	Required for the synthesis of the thiazole moiety
YP_001799188.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
YP_001799191.1	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination
YP_001799193.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
YP_001799195.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
YP_001799200.1	Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001799201.1	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome
YP_001799203.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
YP_001799205.1	paralog group containing: PA0078,PA0079, PA0126, PA0290, PA0351, PA0441,PA0620, PA0657, PA0658, PA0719, PA0720,PA0787, PA0788, PA0811 Transposase IS30 (interpro) IS3/IS150 (IS finder)
YP_001799211.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_001799215.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
YP_001799220.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
YP_001799223.1	protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP
YP_001799227.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
YP_001799228.1	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA
YP_001799234.1	paralog group containing: PA0655, PA0722
YP_001799235.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_001799236.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_001799237.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
YP_001799238.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
YP_001799240.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_001799241.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
YP_001799242.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
YP_001799243.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
YP_001799244.1	binds directly to 23S ribosomal RNA
YP_001799246.1	forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force
YP_001799252.1	in Escherichia coli transcription of this gene is enhanced by polyamines
YP_001799253.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
YP_001799255.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif
YP_001799269.1	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001799288.1	catalyzes the formation of thymidine 5'-phosphate from thymidine
YP_001799289.1	RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome
YP_001799290.1	required for 70S ribosome assembly
YP_001799294.1	paralog group containing: PA0292,PA0354, PA0656, PA0721
YP_001799295.1	paralog group containing: PA0655, PA0722
YP_001799296.1	paralog group containing: PA0316,PA0409, PA0723, PA0790, PA0815
YP_001799297.1	paralog group containing: PA0317,PA0408, PA0724, PA0791, PA0814
YP_001799299.1	paralog group containing: PA0075,PA0076, PA0077, PA0306, PA0307, PA0308,PA0367, PA0368, PA0442, PA0652, PA0786,PA0728
YP_001799303.1	paralog group containing: PA0037,PA0073, PA0193, PA0210, PA0225, PA0255,PA0326, PA0371, PA0427, PA0428, PA0429,PA0732, PA0809
YP_001799304.1	paralog group containing: PA0039,PA0071, PA0195, PA0227, PA0324, PA0373,PA0425, PA0431, PA0735, PA0807
YP_001799305.1	paralog group containing: PA0040,PA0196, PA0228, PA0323, PA0374, PA0424,PA0736, PA0806
YP_001799306.1	paralog group containing: PA0042,PA0070, PA0198, PA0230, PA0247, PA0321,PA0376, PA0422, PA0432, PA0738, PA0804
YP_001799307.1	paralog group containing: PA0043,PA0069, PA0199, PA0231, PA0320, PA0327,PA0377, PA400, PA0421, PA0433, PA0739,PA0778, PA0803
YP_001799308.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001799309.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001799310.1	paralog group containing PA0047, PA0192,PA0202, PA0234, PA0243, PA0336, PA0380,PA0390, PA0418, PA0436, PA0742, PA0800
YP_001799312.1	paralog group containing: PA0031,PA0035, PA0051, PA0052, PA0065, PA0186,PA0205, PA0238, PA0261, PA0262, PA0277,PA0278, PA0286, PA0287, PA0383, PA0414,PA0415, PA468, PA0470, PA0472, PA0749,PA0797
YP_001799322.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth
YP_001799325.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
YP_001799337.1	paralog group containing: PA0043,PA0069, PA0199, PA0231, PA0320, PA0327,PA0377, PA400, PA0421, PA0433, PA0739,PA0778, PA0803
YP_001799339.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
YP_001799345.1	paralog group containing: PA0078,PA0079, PA0126, PA0290, PA0351, PA0441,PA0620, PA0657, PA0658, PA0719, PA0720,PA0787, PA0788, PA0811 bacteriophage simiarities Transposase IS30 (interpro) IS3/IS150 (IS finder)
YP_001799346.1	paralog group containing: PA0253,PA0291, PA0352, PA0353, PA0621, PA0789,PA0810
YP_001799347.1	paralog group containing: PA0316,PA0409, PA0723, PA0790, PA0815
YP_001799348.1	paralog group containing: PA0317,PA0408, PA0724, PA0791, PA0814
YP_001799349.1	paralog group containing: PA0318,PA0407, PA0659, PA0792, PA0813
YP_001799350.1	paralog group containing: PA0405, PA0793
YP_001799351.1	paralog group containing: PA0404, PA0794
YP_001799352.1	paralog group containing: PA0028,PA0029, PA0053, PA0054, PA0063, PA0183,PA0184, PA0206, PA0239, PA0240, PA0264,PA0265, PA0275, PA0281, PA0282, PA0384,PA0412, PA0413, PA0443, PA0444, PA0462,PA0466, PA0750, PA0751, PA0796 bacteriophage similarities Transposase IS30 (Interpro) IS3 family/IS150 group (IS finder)
YP_001799353.1	paralog group containing: PA0031,PA0035, PA0051, PA0052, PA0065, PA0186,PA0205, PA0238, PA0261, PA0262, PA0277,PA0278, PA0286, PA0287, PA0383, PA0414,PA0415, PA468, PA0470, PA0472, PA0749,PA0797
YP_001799354.1	paralog group containing: PA0036,PA0049, PA0050, PA0066, PA0067, PA0187,PA0188, PA0189, PA0204, PA0236, PA0237,PA0260, PA0279, PA0280, PA0285, PA0382,PA0416, PA0473, PA0745, PA0746, PA0747,PA0798
YP_001799355.1	paralog group containing: PA0048,PA0068, PA0190, PA0191, PA0203, PA0235,PA0284, PA0381, PA0417, PA0437,PA0743, PA0744, PA0799
YP_001799356.1	paralog group containing PA0047, PA0192,PA0202, PA0234, PA0243, PA0336, PA0380,PA0390, PA0418, PA0436, PA0742, PA0800
YP_001799357.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001799358.1	paralog group containing: PA0045,PA0200, PA0208, PA0232, PA0245, PA0319,PA0334, PA0378, PA0420, PA0434, PA0740,PA0802
YP_001799359.1	paralog group containing: PA0043,PA0069, PA0199, PA0231, PA0320, PA0327,PA0377, PA400, PA0421, PA0433, PA0739,PA0778, PA0803
YP_001799360.1	paralog group containing: PA0042,PA0070, PA0198, PA0230, PA0247, PA0321,PA0376, PA0422, PA0432, PA0738, PA0804
YP_001799361.1	paralog group containing: PA0197,PA0229, PA0322, PA0423, PA0805
YP_001799362.1	paralog group containing: PA0040,PA0196, PA0228, PA0323, PA0374, PA0424,PA0736, PA0806
YP_001799363.1	paralog group containing: PA0039,PA0071, PA0195, PA0227, PA0324, PA0373,PA0425, PA0431, PA0735, PA0807
YP_001799364.1	paralog group containing: PA0038,PA0072, PA0194, PA0209, PA0226, PA0325,PA0372, PA0426, PA0430, PA0733, PA0734,PA0808
YP_001799365.1	paralog group containing: PA0037,PA0073, PA0193, PA0210, PA0225, PA0255,PA0326, PA0371, PA0427, PA0428, PA0429,PA0732, PA0809
YP_001799366.1	paralog group containing: PA0078,PA0079, PA0126, PA0290, PA0351, PA0441,PA0620, PA0657, PA0658, PA0719, PA0720,PA0787, PA0788, PA0811 bacteriophage similarities Transposase IS30 (Interpro) IS3/IS150 (IS finder)
YP_001799367.1	paralog group containing: PA0406, PA0812
YP_001799368.1	paralog group containing: PA0318,PA0407, PA0659, PA0792, PA0813
YP_001799369.1	paralog group containing: PA0317,PA0408, PA0724, PA0791, PA0814
YP_001799370.1	paralog group containing: PA0316,PA0409, PA0723, PA0790, PA0815
YP_001799380.1	paralog group containing: PA0825, PA0826