-- dump date 20240506_072646 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP140154.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP140154.1.REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40xREFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeqREFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,711REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,711 CDSs (total) :: 6,630REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,711 CDSs (total) :: 6,630 Genes (coding) :: 6,608REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,711 CDSs (total) :: 6,630 Genes (coding) :: 6,608 CDSs (with protein) :: 6,608REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,711 CDSs (total) :: 6,630 Genes (coding) :: 6,608 CDSs (with protein) :: 6,608 Genes (RNA) :: 81REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,711 CDSs (total) :: 6,630 Genes (coding) :: 6,608 CDSs (with protein) :: 6,608 Genes (RNA) :: 81 rRNAs :: 5, 5, 5 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,711 CDSs (total) :: 6,630 Genes (coding) :: 6,608 CDSs (with protein) :: 6,608 Genes (RNA) :: 81 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,711 CDSs (total) :: 6,630 Genes (coding) :: 6,608 CDSs (with protein) :: 6,608 Genes (RNA) :: 81 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 63REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,711 CDSs (total) :: 6,630 Genes (coding) :: 6,608 CDSs (with protein) :: 6,608 Genes (RNA) :: 81 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,711 CDSs (total) :: 6,630 Genes (coding) :: 6,608 CDSs (with protein) :: 6,608 Genes (RNA) :: 81 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 23REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,711 CDSs (total) :: 6,630 Genes (coding) :: 6,608 CDSs (with protein) :: 6,608 Genes (RNA) :: 81 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 23 CDSs (without protein) :: 22REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,711 CDSs (total) :: 6,630 Genes (coding) :: 6,608 CDSs (with protein) :: 6,608 Genes (RNA) :: 81 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 23 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 23REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,711 CDSs (total) :: 6,630 Genes (coding) :: 6,608 CDSs (with protein) :: 6,608 Genes (RNA) :: 81 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 23 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 23 Pseudo Genes (frameshifted) :: 8 of 23REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,711 CDSs (total) :: 6,630 Genes (coding) :: 6,608 CDSs (with protein) :: 6,608 Genes (RNA) :: 81 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 23 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 23 Pseudo Genes (frameshifted) :: 8 of 23 Pseudo Genes (incomplete) :: 18 of 23REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,711 CDSs (total) :: 6,630 Genes (coding) :: 6,608 CDSs (with protein) :: 6,608 Genes (RNA) :: 81 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 23 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 23 Pseudo Genes (frameshifted) :: 8 of 23 Pseudo Genes (incomplete) :: 18 of 23 Pseudo Genes (internal stop) :: 2 of 23REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,711 CDSs (total) :: 6,630 Genes (coding) :: 6,608 CDSs (with protein) :: 6,608 Genes (RNA) :: 81 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 23 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 23 Pseudo Genes (frameshifted) :: 8 of 23 Pseudo Genes (incomplete) :: 18 of 23 Pseudo Genes (internal stop) :: 2 of 23 Pseudo Genes (multiple problems) :: 6 of 23REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,711 CDSs (total) :: 6,630 Genes (coding) :: 6,608 CDSs (with protein) :: 6,608 Genes (RNA) :: 81 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 23 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 23 Pseudo Genes (frameshifted) :: 8 of 23 Pseudo Genes (incomplete) :: 18 of 23 Pseudo Genes (internal stop) :: 2 of 23 Pseudo Genes (multiple problems) :: 6 of 23 CRISPR Arrays :: 2REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,711 CDSs (total) :: 6,630 Genes (coding) :: 6,608 CDSs (with protein) :: 6,608 Genes (RNA) :: 81 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 23 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 23 Pseudo Genes (frameshifted) :: 8 of 23 Pseudo Genes (incomplete) :: 18 of 23 Pseudo Genes (internal stop) :: 2 of 23 Pseudo Genes (multiple problems) :: 6 of 23 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP140154.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 40x Sequencing Technology :: Oxford Nanopore MinION; Illumina MiniSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/22/2023 10:42:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,711 CDSs (total) :: 6,630 Genes (coding) :: 6,608 CDSs (with protein) :: 6,608 Genes (RNA) :: 81 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 23 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 23 Pseudo Genes (frameshifted) :: 8 of 23 Pseudo Genes (incomplete) :: 18 of 23 Pseudo Genes (internal stop) :: 2 of 23 Pseudo Genes (multiple problems) :: 6 of 23 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## COMPLETENESS: full length.