-- dump date 20111121_011151 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 471473000001 SEQ_END SEQ_END NC_010280.1 1038869 1038869 DR NC_010280.1; contig end 1038869..1038869 Chlamydia trachomatis L2b/UCH-1/proctitis YP_001653104.1 CDS hemB NC_010280.1 1 1017 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1..1017 Chlamydia trachomatis L2b/UCH-1/proctitis 5859500 YP_001653105.1 CDS nqrA NC_010280.1 1043 2440 R uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A complement(1043..2440) Chlamydia trachomatis L2b/UCH-1/proctitis 5859728 YP_001653106.1 CDS CTLon_0003 NC_010280.1 2462 2896 R hypothetical protein complement(2462..2896) Chlamydia trachomatis L2b/UCH-1/proctitis 5859478 YP_001653107.1 CDS greA NC_010280.1 3010 5157 D contains N-terminal domain of unknown function fused to transcription elongation factor; GreA is necessary for efficient RNA polymerization through arresting sites; cleaves the nascent transcript and allows resumption of transcription elongation; transcript cleavage factor/unknown domain fusion protein 3010..5157 Chlamydia trachomatis L2b/UCH-1/proctitis 5859499 YP_001653108.1 CDS aspC NC_010280.1 5345 6547 D catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 5345..6547 Chlamydia trachomatis L2b/UCH-1/proctitis 5859615 YP_001653109.1 CDS CTLon_0006 NC_010280.1 6522 7532 D in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 6522..7532 Chlamydia trachomatis L2b/UCH-1/proctitis 5858849 YP_001653110.1 CDS recB NC_010280.1 7548 10628 R exodeoxyribonuclease V beta chain complement(7548..10628) Chlamydia trachomatis L2b/UCH-1/proctitis 5859498 YP_001653111.1 CDS recC NC_010280.1 10630 13650 R exodeoxyribonuclease V gamma chain complement(10630..13650) Chlamydia trachomatis L2b/UCH-1/proctitis 5858962 YP_001653112.1 CDS CTLon_0009 NC_010280.1 13663 15342 D putative membrane efflux protein 13663..15342 Chlamydia trachomatis L2b/UCH-1/proctitis 5858975 YP_001653113.1 CDS CTLon_0010 NC_010280.1 15362 16177 R hypothetical protein complement(15362..16177) Chlamydia trachomatis L2b/UCH-1/proctitis 5859496 YP_001653114.1 CDS topA NC_010280.1 17070 19643 D catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I/SWI domain fusion protein 17070..19643 Chlamydia trachomatis L2b/UCH-1/proctitis 5859495 YP_001653115.1 CDS CTLon_0012 NC_010280.1 19673 20677 R putative oxidoreductase complement(19673..20677) Chlamydia trachomatis L2b/UCH-1/proctitis 5859621 YP_001653116.1 CDS CTLon_0013 NC_010280.1 20656 20952 R integral membrane protein complement(20656..20952) Chlamydia trachomatis L2b/UCH-1/proctitis 5859494 YP_001653117.1 CDS CTLon_0014 NC_010280.1 21057 22436 D hypothetical protein 21057..22436 Chlamydia trachomatis L2b/UCH-1/proctitis 5859491 YP_001653118.1 CDS CTLon_0015 NC_010280.1 22436 23014 D hypothetical protein 22436..23014 Chlamydia trachomatis L2b/UCH-1/proctitis 5859490 YP_001653119.1 CDS CTLon_0016 NC_010280.1 23005 24279 D hypothetical protein 23005..24279 Chlamydia trachomatis L2b/UCH-1/proctitis 5859489 YP_001653120.1 CDS CTLon_0017 NC_010280.1 24282 24818 D Similar to many proposed 5-formyltetrahydrofolate cyclo-ligase; hypothetical protein 24282..24818 Chlamydia trachomatis L2b/UCH-1/proctitis 5859488 YP_001653121.1 CDS recA NC_010280.1 25078 26136 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 25078..26136 Chlamydia trachomatis L2b/UCH-1/proctitis 5859487 YP_001653122.1 CDS CTLon_0019 NC_010280.1 26422 28248 D putative exported lipoprotein 26422..28248 Chlamydia trachomatis L2b/UCH-1/proctitis 5858967 YP_001653123.1 CDS recD NC_010280.1 28245 29735 D exodeoxyribonuclease V alpha chain 28245..29735 Chlamydia trachomatis L2b/UCH-1/proctitis 5859486 YP_001653124.1 CDS CTLon_0021 NC_010280.1 29801 29980 D hypothetical protein 29801..29980 Chlamydia trachomatis L2b/UCH-1/proctitis 5858982 YP_001653125.1 CDS CTLon_0022 NC_010280.1 30081 30800 R ABC transporter ATP-binding protein complement(30081..30800) Chlamydia trachomatis L2b/UCH-1/proctitis 5859485 YP_001653126.1 CDS CTLon_0023 NC_010280.1 30809 31297 R hypothetical protein complement(30809..31297) Chlamydia trachomatis L2b/UCH-1/proctitis 5859484 YP_001653127.1 CDS kdsA NC_010280.1 31294 32103 R catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase complement(31294..32103) Chlamydia trachomatis L2b/UCH-1/proctitis 5859481 YP_001653128.1 CDS CTLon_0025 NC_010280.1 32589 32882 D hypothetical protein 32589..32882 Chlamydia trachomatis L2b/UCH-1/proctitis 5859551 YP_001653129.1 CDS CTLon_0026 NC_010280.1 32882 33199 D hypothetical protein 32882..33199 Chlamydia trachomatis L2b/UCH-1/proctitis 5859480 YP_001653130.1 CDS sfhB NC_010280.1 33281 34288 D ribosomal large subunit pseudouridine synthase D 33281..34288 Chlamydia trachomatis L2b/UCH-1/proctitis 5859479 YP_001653131.1 CDS CTLon_0028 NC_010280.1 34388 34624 D hypothetical protein 34388..34624 Chlamydia trachomatis L2b/UCH-1/proctitis 5858891 YP_001653132.1 CDS gyrA2 NC_010280.1 34763 36235 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A complement(34763..36235) Chlamydia trachomatis L2b/UCH-1/proctitis 5859476 YP_001653133.1 CDS gyrB NC_010280.1 36250 38067 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B complement(36250..38067) Chlamydia trachomatis L2b/UCH-1/proctitis 5859700 YP_001653134.1 CDS hemA NC_010280.1 38447 39454 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 38447..39454 Chlamydia trachomatis L2b/UCH-1/proctitis 5859699 YP_001653135.1 CDS sycE NC_010280.1 40173 40574 D Type III secretion system chaperone 40173..40574 Chlamydia trachomatis L2b/UCH-1/proctitis 5859724 YP_001653136.1 CDS CTLon_0033 NC_010280.1 40578 43067 D phosphopeptide binding protein ( to be a TTSS protein) 40578..43067 Chlamydia trachomatis L2b/UCH-1/proctitis 5859592 YP_001653137.1 CDS CTLon_0034 NC_010280.1 43111 43362 D hypothetical protein 43111..43362 Chlamydia trachomatis L2b/UCH-1/proctitis 5859475 YP_001653138.1 CDS CTLon_0035 NC_010280.1 43389 43640 D hypothetical protein 43389..43640 Chlamydia trachomatis L2b/UCH-1/proctitis 5859474 YP_001653139.1 CDS CTLon_0036 NC_010280.1 43659 44108 D hypothetical protein 43659..44108 Chlamydia trachomatis L2b/UCH-1/proctitis 5859473 YP_001653140.1 CDS CTLon_0037 NC_010280.1 44128 44799 D hypothetical protein 44128..44799 Chlamydia trachomatis L2b/UCH-1/proctitis 5859470 YP_001653141.1 CDS sctN NC_010280.1 44801 46129 D type III secretion system ATPase 44801..46129 Chlamydia trachomatis L2b/UCH-1/proctitis 5859464 YP_001653142.1 CDS CTLon_0039 NC_010280.1 46152 46658 D hypothetical protein 46152..46658 Chlamydia trachomatis L2b/UCH-1/proctitis 5859079 YP_001653143.1 CDS CTLon_0040 NC_010280.1 46662 47513 D hypothetical protein 46662..47513 Chlamydia trachomatis L2b/UCH-1/proctitis 5859460 YP_001653144.1 CDS sctQ NC_010280.1 47523 48644 D type III secretion system protein 47523..48644 Chlamydia trachomatis L2b/UCH-1/proctitis 5859459 YP_001653145.1 CDS pkn5 NC_010280.1 48779 50251 D putative serine/threonine-protein kinase (TTSS effector protein) 48779..50251 Chlamydia trachomatis L2b/UCH-1/proctitis 5859605 YP_001653146.1 CDS CTLon_0043 NC_010280.1 50248 53013 D Type III secretion structural protein (outer membrane ring) 50248..53013 Chlamydia trachomatis L2b/UCH-1/proctitis 5859748 YP_001653147.1 CDS aspC NC_010280.1 53327 54397 R ATP:guanido phosphotransferase complement(53327..54397) Chlamydia trachomatis L2b/UCH-1/proctitis 5859667 YP_001653148.1 CDS CTLon_0045 NC_010280.1 54387 54908 R hypothetical protein complement(54387..54908) Chlamydia trachomatis L2b/UCH-1/proctitis 5858848 YP_001653149.1 CDS frr NC_010280.1 55280 55819 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(55280..55819) Chlamydia trachomatis L2b/UCH-1/proctitis 5859712 YP_001653150.1 CDS pyrH NC_010280.1 55816 56553 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(55816..56553) Chlamydia trachomatis L2b/UCH-1/proctitis 5859600 YP_001653151.1 CDS tsf NC_010280.1 56566 57414 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(56566..57414) Chlamydia trachomatis L2b/UCH-1/proctitis 5858934 YP_001653152.1 CDS rpsB NC_010280.1 57411 58259 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(57411..58259) Chlamydia trachomatis L2b/UCH-1/proctitis 5859240 YP_001653153.1 CDS ompA NC_010280.1 58643 59827 R major outer membrane protein complement(58643..59827) Chlamydia trachomatis L2b/UCH-1/proctitis 5859466 YP_001653154.1 CDS pbpB NC_010280.1 60435 63677 D penicillin-binding protein 60435..63677 Chlamydia trachomatis L2b/UCH-1/proctitis 5859145 YP_001653155.1 CDS CTLon_0052 NC_010280.1 63741 64748 D TPR repeat-containing protein 63741..64748 Chlamydia trachomatis L2b/UCH-1/proctitis 5859171 YP_001653156.1 CDS CTLon_0053 NC_010280.1 65090 66541 D with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 65090..66541 Chlamydia trachomatis L2b/UCH-1/proctitis 5859455 YP_001653157.1 CDS CTLon_0054 NC_010280.1 66544 67311 D ABC transporter ATP-binding protein 66544..67311 Chlamydia trachomatis L2b/UCH-1/proctitis 5859451 YP_001653158.1 CDS CTLon_0055 NC_010280.1 67315 68502 D hypothetical protein 67315..68502 Chlamydia trachomatis L2b/UCH-1/proctitis 5859450 YP_001653159.1 CDS sufS NC_010280.1 68495 69700 D cysteine desulfurase 68495..69700 Chlamydia trachomatis L2b/UCH-1/proctitis 5859446 YP_001653160.1 CDS parB NC_010280.1 69836 70681 D putative chromosome partitioning protein 69836..70681 Chlamydia trachomatis L2b/UCH-1/proctitis 5859590 YP_001653161.1 CDS dppF NC_010280.1 70673 71503 R ABC transport protein, ATPase component complement(70673..71503) Chlamydia trachomatis L2b/UCH-1/proctitis 5859583 YP_001653162.1 CDS dppD NC_010280.1 71496 72461 R ABC transport protein, ATPase component complement(71496..72461) Chlamydia trachomatis L2b/UCH-1/proctitis 5859411 YP_001653163.1 CDS CTLon_0060 NC_010280.1 72622 73296 D hypothetical protein 72622..73296 Chlamydia trachomatis L2b/UCH-1/proctitis 5859413 YP_001653164.1 CDS CTLon_0061 NC_010280.1 73299 74579 D low-affinity inorganic phosphate transporter 73299..74579 Chlamydia trachomatis L2b/UCH-1/proctitis 5859443 YP_001653165.1 CDS pgk NC_010280.1 74707 75918 D Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 74707..75918 Chlamydia trachomatis L2b/UCH-1/proctitis 5859425 YP_001653166.1 CDS CTLon_0063 NC_010280.1 76178 77146 D hypothetical protein 76178..77146 Chlamydia trachomatis L2b/UCH-1/proctitis 5859710 YP_001653167.1 CDS CTLon_0064 NC_010280.1 77197 78393 D hypothetical protein 77197..78393 Chlamydia trachomatis L2b/UCH-1/proctitis 5859423 YP_001653168.1 CDS CTLon_0065 NC_010280.1 78479 79657 D hypothetical protein 78479..79657 Chlamydia trachomatis L2b/UCH-1/proctitis 5859420 YP_001653169.1 CDS nth NC_010280.1 79654 80289 R endonuclease III complement(79654..80289) Chlamydia trachomatis L2b/UCH-1/proctitis 5859418 YP_001653170.1 CDS trmE NC_010280.1 80296 81630 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(80296..81630) Chlamydia trachomatis L2b/UCH-1/proctitis 5859449 YP_001653171.1 CDS psdD NC_010280.1 81898 82803 D catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 81898..82803 Chlamydia trachomatis L2b/UCH-1/proctitis 5859588 YP_001653172.1 CDS CTLon_0069 NC_010280.1 82869 84194 D note the PF07719 Tetratricopeptide repeat motif; hypothetical protein 82869..84194 Chlamydia trachomatis L2b/UCH-1/proctitis 5858866 YP_001653173.1 CDS secA NC_010280.1 84453 87362 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 84453..87362 Chlamydia trachomatis L2b/UCH-1/proctitis 5859417 YP_001653174.1 CDS CTLon_0071 NC_010280.1 87456 87983 R hypothetical protein complement(87456..87983) Chlamydia trachomatis L2b/UCH-1/proctitis 5859701 YP_001653175.1 CDS engA NC_010280.1 88060 89532 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(88060..89532) Chlamydia trachomatis L2b/UCH-1/proctitis 5859415 YP_001653176.1 CDS pcnB NC_010280.1 89648 90880 R polyA polymerase complement(89648..90880) Chlamydia trachomatis L2b/UCH-1/proctitis 5859431 YP_001653177.1 CDS clpX NC_010280.1 90895 92154 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(90895..92154) Chlamydia trachomatis L2b/UCH-1/proctitis 5859136 YP_001653178.1 CDS clpP NC_010280.1 92164 92775 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(92164..92775) Chlamydia trachomatis L2b/UCH-1/proctitis 5859327 YP_001653179.1 CDS tig NC_010280.1 92942 94270 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(92942..94270) Chlamydia trachomatis L2b/UCH-1/proctitis 5859326 YP_001653180.1 CDS CTLon_0077 NC_010280.1 94629 98120 D putative helicase 94629..98120 Chlamydia trachomatis L2b/UCH-1/proctitis 5859566 YP_001653181.1 CDS mreB NC_010280.1 98125 99225 D rod shape-determining protein MreB 98125..99225 Chlamydia trachomatis L2b/UCH-1/proctitis 5859414 YP_001653182.1 CDS pckA NC_010280.1 99222 101021 D catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 99222..101021 Chlamydia trachomatis L2b/UCH-1/proctitis 5859538 YP_001653183.1 CDS CTLon_0080 NC_010280.1 101133 103436 D hypothetical protein 101133..103436 Chlamydia trachomatis L2b/UCH-1/proctitis 5858916 YP_001653184.1 CDS CTLon_0081 NC_010280.1 103463 104635 D hypothetical protein 103463..104635 Chlamydia trachomatis L2b/UCH-1/proctitis 5859412 YP_001653185.1 CDS ompB NC_010280.1 104701 105723 R outer membrane protein B complement(104701..105723) Chlamydia trachomatis L2b/UCH-1/proctitis 5859408 YP_001653186.1 CDS gpsA NC_010280.1 105857 106861 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(105857..106861) Chlamydia trachomatis L2b/UCH-1/proctitis 5859155 YP_001653187.1 CDS CTLon_0084 NC_010280.1 106858 108225 R UDP-N-acetylglucosamine pyrophosphorylase complement(106858..108225) Chlamydia trachomatis L2b/UCH-1/proctitis 5859637 YP_001653188.1 CDS CTLon_0085 NC_010280.1 108237 108602 R hypothetical protein complement(108237..108602) Chlamydia trachomatis L2b/UCH-1/proctitis 5859407 YP_001653189.1 CDS fliI NC_010280.1 108595 109899 R involved in type III protein export; type III secretion system ATPase complement(108595..109899) Chlamydia trachomatis L2b/UCH-1/proctitis 5859406 YP_001653190.1 CDS CTLon_0087 NC_010280.1 109973 110497 R hypothetical protein complement(109973..110497) Chlamydia trachomatis L2b/UCH-1/proctitis 5859477 YP_001653191.1 CDS fliF NC_010280.1 110502 111506 R type III secretion system protein complement(110502..111506) Chlamydia trachomatis L2b/UCH-1/proctitis 5859400 YP_001653192.1 CDS CTLon_0089 NC_010280.1 111780 112562 R note the NifU-like protein domains: PF01592;NifU-like N terminal domain and PF01106, NifU-like domain; hypothetical protein complement(111780..112562) Chlamydia trachomatis L2b/UCH-1/proctitis 5859482 YP_001653193.1 CDS CTLon_0090 NC_010280.1 112559 113713 R cysteine desulfurase complement(112559..113713) Chlamydia trachomatis L2b/UCH-1/proctitis 5859399 YP_001653194.1 CDS pgmA NC_010280.1 113668 114348 R catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase complement(113668..114348) Chlamydia trachomatis L2b/UCH-1/proctitis 5859396 YP_001653195.1 CDS CTLon_0092 NC_010280.1 114643 115368 D ribosomal large subunit pseudouridine synthase B 114643..115368 Chlamydia trachomatis L2b/UCH-1/proctitis 5859507 YP_001653196.1 CDS CTLon_0093 NC_010280.1 115487 116011 D hypothetical protein 115487..116011 Chlamydia trachomatis L2b/UCH-1/proctitis 5859395 YP_001653197.1 CDS birA NC_010280.1 116038 116592 D catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 116038..116592 Chlamydia trachomatis L2b/UCH-1/proctitis 5859393 YP_001653198.1 CDS CTLon_0095 NC_010280.1 116599 117738 R cell cycle protein complement(116599..117738) Chlamydia trachomatis L2b/UCH-1/proctitis 5859124 YP_001653199.1 CDS CTLon_0096 NC_010280.1 117830 119809 R cation transporting ATPase complement(117830..119809) Chlamydia trachomatis L2b/UCH-1/proctitis 5859392 YP_001653200.1 CDS CTLon_0097 NC_010280.1 119833 120579 R putative integral membrane protein complement(119833..120579) Chlamydia trachomatis L2b/UCH-1/proctitis 5859385 YP_001653201.1 CDS serS NC_010280.1 120616 121902 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(120616..121902) Chlamydia trachomatis L2b/UCH-1/proctitis 5859384 YP_001653202.1 CDS ribD NC_010280.1 121944 123071 D riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) 121944..123071 Chlamydia trachomatis L2b/UCH-1/proctitis 5859595 YP_001653203.1 CDS ribA NC_010280.1 123181 124455 D bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 123181..124455 Chlamydia trachomatis L2b/UCH-1/proctitis 5859088 YP_001653204.1 CDS ribH NC_010280.1 124424 124897 D RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 124424..124897 Chlamydia trachomatis L2b/UCH-1/proctitis 5859060 YP_001653205.1 CDS CTLon_0102 NC_010280.1 124948 126294 R hypothetical protein complement(124948..126294) Chlamydia trachomatis L2b/UCH-1/proctitis 5859093 YP_001653206.1 CDS CTLon_0103 NC_010280.1 126679 127344 D putative lipoprotein 126679..127344 Chlamydia trachomatis L2b/UCH-1/proctitis 5859382 YP_001653207.1 CDS dagA NC_010280.1 127461 128828 D Na(+)-linked D-alanine glycine permease 127461..128828 Chlamydia trachomatis L2b/UCH-1/proctitis 5859380 YP_001653208.1 CDS CTLon_0105 NC_010280.1 128886 129338 D Note the PF01161;Phosphatidylethanolamine-binding motif; hypothetical protein 128886..129338 Chlamydia trachomatis L2b/UCH-1/proctitis 5859365 YP_001653209.1 CDS CTLon_0106 NC_010280.1 129347 130006 R SET domain-containing protein complement(129347..130006) Chlamydia trachomatis L2b/UCH-1/proctitis 5859377 YP_001653210.1 CDS CTLon_0107 NC_010280.1 130003 130791 R Zn-dependent hydrolase complement(130003..130791) Chlamydia trachomatis L2b/UCH-1/proctitis 5859375 YP_001653211.1 CDS ftsK NC_010280.1 130795 133194 R cell division protein complement(130795..133194) Chlamydia trachomatis L2b/UCH-1/proctitis 5859373 YP_001653212.1 CDS dmpP NC_010280.1 139465 140760 R uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F complement(139465..140760) Chlamydia trachomatis L2b/UCH-1/proctitis 5858885 YP_001653213.1 CDS yajC NC_010280.1 140903 141247 R member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC complement(140903..141247) Chlamydia trachomatis L2b/UCH-1/proctitis 5859389 YP_001653214.1 CDS CTLon_0111 NC_010280.1 141352 142542 R rRNA methyltransferase complement(141352..142542) Chlamydia trachomatis L2b/UCH-1/proctitis 5859372 YP_001653215.1 CDS hctA NC_010280.1 142730 143107 R histone H1--like developmental protein complement(142730..143107) Chlamydia trachomatis L2b/UCH-1/proctitis 5859371 YP_001653216.1 CDS CTLon_0113 NC_010280.1 143503 145971 D hypothetical protein 143503..145971 Chlamydia trachomatis L2b/UCH-1/proctitis 5859720 YP_001653217.1 CDS hemG NC_010280.1 145963 147237 R catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX; protoporphyrinogen oxidase complement(145963..147237) Chlamydia trachomatis L2b/UCH-1/proctitis 5859369 YP_001653218.1 CDS hemN NC_010280.1 147234 148607 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(147234..148607) Chlamydia trachomatis L2b/UCH-1/proctitis 5859731 YP_001653219.1 CDS hemE NC_010280.1 148580 149590 R catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase complement(148580..149590) Chlamydia trachomatis L2b/UCH-1/proctitis 5859735 YP_001653220.1 CDS mfd NC_010280.1 149603 152842 R transcription-repair coupling factor complement(149603..152842) Chlamydia trachomatis L2b/UCH-1/proctitis 5859732 YP_001653221.1 CDS alaS NC_010280.1 152818 155445 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(152818..155445) Chlamydia trachomatis L2b/UCH-1/proctitis 5859559 YP_001653222.1 CDS tktB NC_010280.1 161270 163270 D catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 161270..163270 Chlamydia trachomatis L2b/UCH-1/proctitis 5858884 YP_001653223.1 CDS amn NC_010280.1 163267 164136 R Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase complement(163267..164136) Chlamydia trachomatis L2b/UCH-1/proctitis 5859593 YP_001653224.1 CDS efp NC_010280.1 164392 164928 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 164392..164928 Chlamydia trachomatis L2b/UCH-1/proctitis 5858865 YP_001653225.1 CDS CTLon_0122 NC_010280.1 164944 165168 R hypothetical protein complement(164944..165168) Chlamydia trachomatis L2b/UCH-1/proctitis 5859429 YP_001653226.1 CDS CTLon_0123 NC_010280.1 165215 166087 R Note the PF00149;Calcineurin-like phosphoesterase motif; hypothetical protein complement(165215..166087) Chlamydia trachomatis L2b/UCH-1/proctitis 5859367 YP_001653227.1 CDS groEL NC_010280.1 166168 167706 R 60 kDa chaperonin GroEL complement(166168..167706) Chlamydia trachomatis L2b/UCH-1/proctitis 5859366 YP_001653228.1 CDS murF NC_010280.1 168154 169506 D UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 168154..169506 Chlamydia trachomatis L2b/UCH-1/proctitis 5859714 YP_001653229.1 CDS mraY NC_010280.1 169652 170662 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 169652..170662 Chlamydia trachomatis L2b/UCH-1/proctitis 5859524 YP_001653230.1 CDS murD NC_010280.1 170674 171924 D UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 170674..171924 Chlamydia trachomatis L2b/UCH-1/proctitis 5859536 YP_001653231.1 CDS nlpD NC_010280.1 171921 172658 D muramidase 171921..172658 Chlamydia trachomatis L2b/UCH-1/proctitis 5859527 YP_001653232.1 CDS ftsW NC_010280.1 172674 173831 D cell division protein 172674..173831 Chlamydia trachomatis L2b/UCH-1/proctitis 5859472 YP_001653233.1 CDS murG NC_010280.1 173740 174798 D UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 173740..174798 Chlamydia trachomatis L2b/UCH-1/proctitis 5859528 YP_001653234.1 CDS murC NC_010280.1 174803 177214 D catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine and catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase 174803..177214 Chlamydia trachomatis L2b/UCH-1/proctitis 5859521 YP_001653235.1 CDS CTLon_0132 NC_010280.1 177251 177670 R hypothetical protein complement(177251..177670) Chlamydia trachomatis L2b/UCH-1/proctitis 5859531 YP_001653236.1 CDS CTLon_0133 NC_010280.1 177828 178634 R hypothetical protein complement(177828..178634) Chlamydia trachomatis L2b/UCH-1/proctitis 5859364 YP_001653237.1 CDS rbsV NC_010280.1 178788 179120 D anti-sigma F factor antagonist 178788..179120 Chlamydia trachomatis L2b/UCH-1/proctitis 5859363 YP_001653238.1 CDS miaA NC_010280.1 179124 180143 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 179124..180143 Chlamydia trachomatis L2b/UCH-1/proctitis 5858948 YP_001653239.1 CDS CTLon_0136 NC_010280.1 180148 181200 R Note the PF04055;Radical SAM superfamily motif; hypothetical protein complement(180148..181200) Chlamydia trachomatis L2b/UCH-1/proctitis 5859549 YP_001653240.1 CDS CTLon_0137 NC_010280.1 181290 182972 D hypothetical protein 181290..182972 Chlamydia trachomatis L2b/UCH-1/proctitis 5859360 YP_001653241.1 CDS CTLon_0138 NC_010280.1 183426 183785 D Note the Pfam PF02410;Domain of unknown function associated with iojap superfamily proteins; hypothetical protein 183426..183785 Chlamydia trachomatis L2b/UCH-1/proctitis 5859357 YP_001653242.1 CDS fabF NC_010280.1 183796 185052 D FabF, beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-(acyl carrier protein) synthase II 183796..185052 Chlamydia trachomatis L2b/UCH-1/proctitis 5859355 YP_001653243.1 CDS CTLon_0140 NC_010280.1 185049 185501 D Note the Pfam PF00293;NUDIX domain; hypothetical protein 185049..185501 Chlamydia trachomatis L2b/UCH-1/proctitis 5859439 YP_001653244.1 CDS ppa NC_010280.1 185582 186211 R catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase complement(185582..186211) Chlamydia trachomatis L2b/UCH-1/proctitis 5859351 YP_001653245.1 CDS ldh NC_010280.1 186459 187499 D leucine dehydrogenase 186459..187499 Chlamydia trachomatis L2b/UCH-1/proctitis 5858838 YP_001653246.1 CDS cysQ NC_010280.1 187465 188493 R 3'(2'),5'-bisphosphate nucleotidase complement(187465..188493) Chlamydia trachomatis L2b/UCH-1/proctitis 5859676 YP_001653247.1 CDS CTLon_0144 NC_010280.1 188791 189552 D 1-acyl-sn-glycerol-3-phosphate acyltransferase 188791..189552 Chlamydia trachomatis L2b/UCH-1/proctitis 5859362 YP_001653248.1 CDS aas NC_010280.1 189560 191173 D Synthesizes thioester adducts of fatty acids enzymatically to the phosphopantetheine group of acyl carrier protein; long chain fatty acid--[acyl-carrier-protein] ligase 189560..191173 Chlamydia trachomatis L2b/UCH-1/proctitis 5859345 YP_001653249.1 CDS bioF NC_010280.1 191216 192349 D catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 191216..192349 Chlamydia trachomatis L2b/UCH-1/proctitis 5858882 YP_001653250.1 CDS priA NC_010280.1 192268 194529 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(192268..194529) Chlamydia trachomatis L2b/UCH-1/proctitis 5859671 YP_001653251.1 CDS CTLon_0148 NC_010280.1 194484 195173 R hypothetical protein complement(194484..195173) Chlamydia trachomatis L2b/UCH-1/proctitis 5858846 YP_001653252.1 CDS CTLon_0149 NC_010280.1 195329 195823 D protein disulfide isomerase 195329..195823 Chlamydia trachomatis L2b/UCH-1/proctitis 5859342 YP_001653253.1 CDS lysS NC_010280.1 196055 197635 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 196055..197635 Chlamydia trachomatis L2b/UCH-1/proctitis 5859341 YP_001653254.1 CDS cysS NC_010280.1 197632 199125 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(197632..199125) Chlamydia trachomatis L2b/UCH-1/proctitis 5859568 YP_001653255.1 CDS CTLon_0152 NC_010280.1 199378 200427 D hypothetical protein 199378..200427 Chlamydia trachomatis L2b/UCH-1/proctitis 5859361 YP_001653256.1 CDS rnpA NC_010280.1 200505 200867 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(200505..200867) Chlamydia trachomatis L2b/UCH-1/proctitis 5859340 YP_001653257.1 CDS rpmH NC_010280.1 200880 201017 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(200880..201017) Chlamydia trachomatis L2b/UCH-1/proctitis 5859641 YP_001653258.1 CDS rpmJ NC_010280.1 201494 201631 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 201494..201631 Chlamydia trachomatis L2b/UCH-1/proctitis 5859638 YP_001653259.1 CDS rpsN NC_010280.1 201655 201960 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 201655..201960 Chlamydia trachomatis L2b/UCH-1/proctitis 5859259 YP_001653260.1 CDS CTLon_0157 NC_010280.1 201994 202494 R hypothetical protein complement(201994..202494) Chlamydia trachomatis L2b/UCH-1/proctitis 5859594 YP_001653261.1 CDS CTLon_0158 NC_010280.1 202616 202867 R putative integral membrane protein complement(202616..202867) Chlamydia trachomatis L2b/UCH-1/proctitis 5859339 YP_001653262.1 CDS CTLon_0159 NC_010280.1 203147 203641 D hypothetical protein 203147..203641 Chlamydia trachomatis L2b/UCH-1/proctitis 5859337 YP_001653263.1 CDS uvrC NC_010280.1 203688 205427 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(203688..205427) Chlamydia trachomatis L2b/UCH-1/proctitis 5859336 YP_001653264.1 CDS mutS NC_010280.1 205509 207971 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(205509..207971) Chlamydia trachomatis L2b/UCH-1/proctitis 5859173 YP_001653265.1 CDS dnaG NC_010280.1 208304 210091 D synthesizes RNA primers at the replication forks; DNA primase 208304..210091 Chlamydia trachomatis L2b/UCH-1/proctitis 5859331 YP_001653266.1 CDS CTLon_0164 NC_010280.1 210176 210463 D hypothetical protein 210176..210463 Chlamydia trachomatis L2b/UCH-1/proctitis 5859398 YP_001653267.1 CDS CTLon_0165 NC_010280.1 210590 211081 D hypothetical protein 210590..211081 Chlamydia trachomatis L2b/UCH-1/proctitis 5859329 YP_001653268.1 CDS glyQ NC_010280.1 211164 214175 R glycyl-tRNA synthetase complement(211164..214175) Chlamydia trachomatis L2b/UCH-1/proctitis 5859325 YP_001653269.1 CDS pgsA NC_010280.1 214629 215237 D CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 214629..215237 Chlamydia trachomatis L2b/UCH-1/proctitis 5859585 YP_001653270.1 CDS glgA NC_010280.1 215244 216668 R catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase complement(215244..216668) Chlamydia trachomatis L2b/UCH-1/proctitis 5859629 YP_001653271.1 CDS rplY NC_010280.1 217245 217802 D the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 217245..217802 Chlamydia trachomatis L2b/UCH-1/proctitis 5859561 YP_001653272.1 CDS pth NC_010280.1 217810 218349 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 217810..218349 Chlamydia trachomatis L2b/UCH-1/proctitis 5859247 YP_001653273.1 CDS rpsF NC_010280.1 218487 218825 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 218487..218825 Chlamydia trachomatis L2b/UCH-1/proctitis 5858876 YP_001653274.1 CDS rpsR NC_010280.1 218842 219087 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 218842..219087 Chlamydia trachomatis L2b/UCH-1/proctitis 5858875 YP_001653275.1 CDS rplI NC_010280.1 219108 219611 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 219108..219611 Chlamydia trachomatis L2b/UCH-1/proctitis 5859768 YP_001653276.1 CDS ispE NC_010280.1 219675 220541 D catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 219675..220541 Chlamydia trachomatis L2b/UCH-1/proctitis 5859705 YP_001653277.1 CDS CTLon_0175 NC_010280.1 220844 222196 R putative integral membrane protein complement(220844..222196) Chlamydia trachomatis L2b/UCH-1/proctitis 5859697 YP_001653278.1 CDS ptr NC_010280.1 222375 225245 R exported insulinase/protease complement(222375..225245) Chlamydia trachomatis L2b/UCH-1/proctitis 5859324 YP_001653279.1 CDS plsB NC_010280.1 225297 226298 R glycerol-3-phosphate acyltransferase complement(225297..226298) Chlamydia trachomatis L2b/UCH-1/proctitis 5858908 YP_001653280.1 CDS cafE NC_010280.1 226311 227849 R ribonuclease E complement(226311..227849) Chlamydia trachomatis L2b/UCH-1/proctitis 5859750 YP_001653281.1 CDS CTLon_0179 NC_010280.1 228413 228733 D hypothetical protein 228413..228733 Chlamydia trachomatis L2b/UCH-1/proctitis 5859620 YP_001653282.1 CDS CTLon_0180 NC_010280.1 228673 228999 D hypothetical protein 228673..228999 Chlamydia trachomatis L2b/UCH-1/proctitis 5859320 YP_001653283.1 CDS rpmF NC_010280.1 228983 229162 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 228983..229162 Chlamydia trachomatis L2b/UCH-1/proctitis 5859319 YP_001653284.1 CDS plsX NC_010280.1 229184 230149 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 229184..230149 Chlamydia trachomatis L2b/UCH-1/proctitis 5859227 YP_001653285.1 CDS pmpD NC_010280.1 230369 234961 D polymorphic outer membrane protein 230369..234961 Chlamydia trachomatis L2b/UCH-1/proctitis 5859752 YP_001653286.1 CDS CTLon_0184 NC_010280.1 235162 235956 D carries characteristic twin membrane spanning domains; hypothetical protein 235162..235956 Chlamydia trachomatis L2b/UCH-1/proctitis 5859755 YP_001653287.1 CDS CTLon_0185 NC_010280.1 236040 236339 R hypothetical protein complement(236040..236339) Chlamydia trachomatis L2b/UCH-1/proctitis 5859318 YP_001653288.1 CDS CTLon_0186 NC_010280.1 236360 236722 R hypothetical protein complement(236360..236722) Chlamydia trachomatis L2b/UCH-1/proctitis 5859317 YP_001653289.1 CDS glmM NC_010280.1 236967 238343 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 236967..238343 Chlamydia trachomatis L2b/UCH-1/proctitis 5859315 YP_001653290.1 CDS glmS NC_010280.1 238354 240174 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 238354..240174 Chlamydia trachomatis L2b/UCH-1/proctitis 5859314 YP_001653291.1 CDS tyrP NC_010280.1 240277 241473 D tyrosine-specific transport protein 240277..241473 Chlamydia trachomatis L2b/UCH-1/proctitis 5859573 YP_001653292.1 CDS CTLon_0190 NC_010280.1 241656 242849 D tyrosine-specific transport protein 241656..242849 Chlamydia trachomatis L2b/UCH-1/proctitis 5859691 YP_001653293.1 CDS CTLon_0191 NC_010280.1 242891 243607 D putative membrane transport protein 242891..243607 Chlamydia trachomatis L2b/UCH-1/proctitis 5859313 YP_001653294.1 CDS ftsY NC_010280.1 243704 244558 R cell division protein complement(243704..244558) Chlamydia trachomatis L2b/UCH-1/proctitis 5859312 YP_001653295.1 CDS sucC NC_010280.1 244628 245788 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 244628..245788 Chlamydia trachomatis L2b/UCH-1/proctitis 5859530 YP_001653296.1 CDS sucD NC_010280.1 245803 246678 D Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 245803..246678 Chlamydia trachomatis L2b/UCH-1/proctitis 5859771 YP_001653297.1 CDS htrA NC_010280.1 246818 248311 D serine protease 246818..248311 Chlamydia trachomatis L2b/UCH-1/proctitis 5859591 YP_001653298.1 CDS CTLon_0196 NC_010280.1 248513 251437 D metalloprotease-insulinase 248513..251437 Chlamydia trachomatis L2b/UCH-1/proctitis 5859532 YP_001653299.1 CDS rmuC NC_010280.1 251451 252734 R DNA recombination protein complement(251451..252734) Chlamydia trachomatis L2b/UCH-1/proctitis 5859309 YP_001653300.1 CDS pssA NC_010280.1 252738 253529 R CDP-diacylglycerol--serine O-phosphatidyltransferase complement(252738..253529) Chlamydia trachomatis L2b/UCH-1/proctitis 5859092 YP_001653301.1 CDS nrdA NC_010280.1 254164 257307 D catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 254164..257307 Chlamydia trachomatis L2b/UCH-1/proctitis 5858883 YP_001653302.1 CDS nrdB NC_010280.1 257345 258385 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 257345..258385 Chlamydia trachomatis L2b/UCH-1/proctitis 5859453 YP_001653303.1 CDS trmB NC_010280.1 258645 259319 D tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 258645..259319 Chlamydia trachomatis L2b/UCH-1/proctitis 5859447 YP_001653304.1 CDS CTLon_0202 NC_010280.1 259435 260019 D putative SAM-dependent methyltransferase 259435..260019 Chlamydia trachomatis L2b/UCH-1/proctitis 5859348 YP_001653305.1 CDS murB NC_010280.1 260016 260891 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(260016..260891) Chlamydia trachomatis L2b/UCH-1/proctitis 5859307 YP_001653306.1 CDS nusB NC_010280.1 261024 261530 R Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB complement(261024..261530) Chlamydia trachomatis L2b/UCH-1/proctitis 5859529 YP_001653307.1 CDS infC NC_010280.1 261962 262522 D IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 261962..262522 Chlamydia trachomatis L2b/UCH-1/proctitis 5859120 YP_001653308.1 CDS rpmI NC_010280.1 262509 262694 D 50S ribosomal protein L35 262509..262694 Chlamydia trachomatis L2b/UCH-1/proctitis 5859722 YP_001653309.1 CDS rplT NC_010280.1 262713 263084 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 262713..263084 Chlamydia trachomatis L2b/UCH-1/proctitis 5858871 YP_001653310.1 CDS pheS NC_010280.1 263091 264119 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 263091..264119 Chlamydia trachomatis L2b/UCH-1/proctitis 5859655 YP_001653311.1 CDS CTLon_0209 NC_010280.1 264430 266406 D hypothetical protein 264430..266406 Chlamydia trachomatis L2b/UCH-1/proctitis 5859308 YP_001653312.1 CDS CTLon_0210 NC_010280.1 266403 267503 R putative membrane transport protein complement(266403..267503) Chlamydia trachomatis L2b/UCH-1/proctitis 5859306 YP_001653313.1 CDS CTLon_0211 NC_010280.1 267506 268570 R putative membrane transport protein complement(267506..268570) Chlamydia trachomatis L2b/UCH-1/proctitis 5859305 YP_001653314.1 CDS tilS NC_010280.1 268668 269633 D tRNA(Ile)-lysidine synthase 268668..269633 Chlamydia trachomatis L2b/UCH-1/proctitis 5859304 YP_001653315.1 CDS ftsH NC_010280.1 269794 272535 D cell division protein 269794..272535 Chlamydia trachomatis L2b/UCH-1/proctitis 5859045 YP_001653316.1 CDS pnp NC_010280.1 272750 274837 R polynucleotide phosphorylase/polyadenylase complement(272750..274837) Chlamydia trachomatis L2b/UCH-1/proctitis 5859526 YP_001653317.1 CDS rpsO NC_010280.1 274866 275135 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(274866..275135) Chlamydia trachomatis L2b/UCH-1/proctitis 5859767 YP_001653318.1 CDS CTLon_0216 NC_010280.1 275361 275852 D cytosine deaminase 275361..275852 Chlamydia trachomatis L2b/UCH-1/proctitis 5859765 YP_001653319.1 CDS CTLon_0217 NC_010280.1 275884 276102 D hypothetical protein 275884..276102 Chlamydia trachomatis L2b/UCH-1/proctitis 5859303 YP_001653320.1 CDS CTLon_0218 NC_010280.1 276074 276778 R putative integral membrane protein complement(276074..276778) Chlamydia trachomatis L2b/UCH-1/proctitis 5859302 YP_001653321.1 CDS CTLon_0219 NC_010280.1 276913 277431 R hypothetical protein complement(276913..277431) Chlamydia trachomatis L2b/UCH-1/proctitis 5859301 YP_001653322.1 CDS CTLon_0220 NC_010280.1 277444 277950 R hypothetical protein complement(277444..277950) Chlamydia trachomatis L2b/UCH-1/proctitis 5859300 YP_001653323.1 CDS CTLon_0221 NC_010280.1 277978 278457 R hypothetical protein complement(277978..278457) Chlamydia trachomatis L2b/UCH-1/proctitis 5859299 YP_001653324.1 CDS CTLon_0222 NC_010280.1 278774 278962 D hypothetical protein 278774..278962 Chlamydia trachomatis L2b/UCH-1/proctitis 5859298 YP_001653325.1 CDS CTLon_0223 NC_010280.1 278981 280198 D putative integral membrane protein 278981..280198 Chlamydia trachomatis L2b/UCH-1/proctitis 5859297 YP_001653326.1 CDS map NC_010280.1 280155 281030 R catalyzes the removal of N-terminal amino acids from peptides and arylamides; methionine aminopeptidase complement(280155..281030) Chlamydia trachomatis L2b/UCH-1/proctitis 5859296 YP_001653327.1 CDS CTLon_0225 NC_010280.1 281063 281704 R putative integral membrane protein complement(281063..281704) Chlamydia trachomatis L2b/UCH-1/proctitis 5859563 YP_001653328.1 CDS CTLon_0226 NC_010280.1 281721 282320 R putative integral membrane protein complement(281721..282320) Chlamydia trachomatis L2b/UCH-1/proctitis 5859295 YP_001653329.1 CDS CTLon_0227 NC_010280.1 282515 284284 R ABC transporter permease complement(282515..284284) Chlamydia trachomatis L2b/UCH-1/proctitis 5859294 YP_001653330.1 CDS CTLon_0229 NC_010280.1 285811 287514 R sulfate transporter complement(285811..287514) Chlamydia trachomatis L2b/UCH-1/proctitis 5859537 YP_001653331.1 CDS CTLon_0230 NC_010280.1 287745 287906 R hypothetical protein complement(287745..287906) Chlamydia trachomatis L2b/UCH-1/proctitis 5859292 YP_001653332.1 CDS CTLon_0231 NC_010280.1 287946 288155 R hypothetical protein complement(287946..288155) Chlamydia trachomatis L2b/UCH-1/proctitis 5859291 YP_001653333.1 CDS CTLon_0232 NC_010280.1 288269 289534 D putative membrane transport protein 288269..289534 Chlamydia trachomatis L2b/UCH-1/proctitis 5859290 YP_001653334.1 CDS cpa NC_010280.1 289644 291449 D putative exported protease 289644..291449 Chlamydia trachomatis L2b/UCH-1/proctitis 5859289 YP_001653335.1 CDS ispH NC_010280.1 291544 292467 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 291544..292467 Chlamydia trachomatis L2b/UCH-1/proctitis 5859349 YP_001653336.1 CDS copD2 NC_010280.1 292519 294000 R note that the product of this CDS has been proposed to be a putative type III secretion system translocator; hypothetical protein complement(292519..294000) Chlamydia trachomatis L2b/UCH-1/proctitis 5859688 YP_001653337.1 CDS copB2 NC_010280.1 294012 295532 R putative type III secretion translocator complement(294012..295532) Chlamydia trachomatis L2b/UCH-1/proctitis 5859347 YP_001653338.1 CDS lcrH NC_010280.1 295560 296156 R type III secretion chaperone complement(295560..296156) Chlamydia trachomatis L2b/UCH-1/proctitis 5859338 YP_001653339.1 CDS CTLon_0238 NC_010280.1 296078 297526 R hypothetical protein complement(296078..297526) Chlamydia trachomatis L2b/UCH-1/proctitis 5859680 YP_001653340.1 CDS xerD NC_010280.1 298387 299289 R site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD complement(298387..299289) Chlamydia trachomatis L2b/UCH-1/proctitis 5859115 YP_001653341.1 CDS CTLon_0240 NC_010280.1 299537 300526 D hypothetical protein 299537..300526 Chlamydia trachomatis L2b/UCH-1/proctitis 5859723 YP_001653342.1 CDS glgB NC_010280.1 300541 302757 D catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching enzyme 300541..302757 Chlamydia trachomatis L2b/UCH-1/proctitis 5859287 YP_001653343.1 CDS CTLon_0242 NC_010280.1 302768 303787 R hypothetical protein complement(302768..303787) Chlamydia trachomatis L2b/UCH-1/proctitis 5859560 YP_001653344.1 CDS CTLon_0243 NC_010280.1 304014 305225 R hypothetical protein complement(304014..305225) Chlamydia trachomatis L2b/UCH-1/proctitis 5859286 YP_001653345.1 CDS pmpE NC_010280.1 305402 308299 R polymorphic outer membrane protein complement(305402..308299) Chlamydia trachomatis L2b/UCH-1/proctitis 5859285 YP_001653346.1 CDS pmpF NC_010280.1 308302 311400 R polymorphic outer membrane protein complement(308302..311400) Chlamydia trachomatis L2b/UCH-1/proctitis 5859757 YP_001653347.1 CDS pmpG NC_010280.1 311565 314606 D polymorphic outer membrane protein 311565..314606 Chlamydia trachomatis L2b/UCH-1/proctitis 5859756 YP_001653348.1 CDS pmpH NC_010280.1 314637 317666 D polymorphic outer membrane protein 314637..317666 Chlamydia trachomatis L2b/UCH-1/proctitis 5859761 YP_001653349.1 CDS CTLon_0248 NC_010280.1 318081 318677 D hypothetical protein 318081..318677 Chlamydia trachomatis L2b/UCH-1/proctitis 5859763 YP_001653350.1 CDS pmpI NC_010280.1 318772 321408 R polymorphic outer membrane protein complement(318772..321408) Chlamydia trachomatis L2b/UCH-1/proctitis 5859284 YP_001653351.1 CDS CTLon_0250 NC_010280.1 321683 323455 D hypothetical protein 321683..323455 Chlamydia trachomatis L2b/UCH-1/proctitis 5859762 YP_001653352.1 CDS CTLon_0251 NC_010280.1 323600 323872 R hypothetical protein complement(323600..323872) Chlamydia trachomatis L2b/UCH-1/proctitis 5859282 YP_001653353.1 CDS gatC NC_010280.1 324073 324375 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 324073..324375 Chlamydia trachomatis L2b/UCH-1/proctitis 5859281 YP_001653354.1 CDS gatA NC_010280.1 324387 325862 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 324387..325862 Chlamydia trachomatis L2b/UCH-1/proctitis 5859548 YP_001653355.1 CDS gatB NC_010280.1 325864 327330 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 325864..327330 Chlamydia trachomatis L2b/UCH-1/proctitis 5859539 YP_001653356.1 CDS CTLon_0255 NC_010280.1 327429 328520 R hypothetical protein complement(327429..328520) Chlamydia trachomatis L2b/UCH-1/proctitis 5859543 YP_001653357.1 CDS CTLon_0256 NC_010280.1 328648 329217 R hypothetical protein complement(328648..329217) Chlamydia trachomatis L2b/UCH-1/proctitis 5859280 YP_001653358.1 CDS CTLon_0257 NC_010280.1 329531 330481 D hypothetical protein 329531..330481 Chlamydia trachomatis L2b/UCH-1/proctitis 5859279 YP_001653359.1 CDS rnhC NC_010280.1 330497 331399 R An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease HIII complement(330497..331399) Chlamydia trachomatis L2b/UCH-1/proctitis 5859278 YP_001653360.1 CDS CTLon_0259 NC_010280.1 331655 332086 D hypothetical protein 331655..332086 Chlamydia trachomatis L2b/UCH-1/proctitis 5859112 YP_001653361.1 CDS htrB NC_010280.1 332073 333440 R Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase complement(332073..333440) Chlamydia trachomatis L2b/UCH-1/proctitis 5859277 YP_001653362.1 CDS CTLon_0261 NC_010280.1 333572 334828 R hypothetical protein complement(333572..334828) Chlamydia trachomatis L2b/UCH-1/proctitis 5859233 YP_001653363.1 CDS CTLon_0262 NC_010280.1 334825 335619 R putative integral membrane protein complement(334825..335619) Chlamydia trachomatis L2b/UCH-1/proctitis 5859276 YP_001653364.1 CDS cydA NC_010280.1 335894 337234 D cytochrome d ubiquinol oxidase subunit I 335894..337234 Chlamydia trachomatis L2b/UCH-1/proctitis 5859272 YP_001653365.1 CDS cydB NC_010280.1 337246 338307 D cytochrome d ubiquinol oxidase subunit II 337246..338307 Chlamydia trachomatis L2b/UCH-1/proctitis 5859356 YP_001653366.1 CDS CTLon_0265 NC_010280.1 338405 339709 R hypothetical protein complement(338405..339709) Chlamydia trachomatis L2b/UCH-1/proctitis 5859359 YP_001653367.1 CDS CTLon_0266 NC_010280.1 339918 340646 D hypothetical protein 339918..340646 Chlamydia trachomatis L2b/UCH-1/proctitis 5859270 YP_001653368.1 CDS CTLon_0267 NC_010280.1 340832 342133 D hypothetical protein 340832..342133 Chlamydia trachomatis L2b/UCH-1/proctitis 5859268 YP_001653369.1 CDS CTLon_0268 NC_010280.1 342195 342668 R hypothetical protein complement(342195..342668) Chlamydia trachomatis L2b/UCH-1/proctitis 5859267 YP_001653370.1 CDS ileS NC_010280.1 343714 346824 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase 343714..346824 Chlamydia trachomatis L2b/UCH-1/proctitis 5859265 YP_001653371.1 CDS lepB NC_010280.1 346883 348769 R signal peptidase I complement(346883..348769) Chlamydia trachomatis L2b/UCH-1/proctitis 5859269 YP_001653372.1 CDS CTLon_0271 NC_010280.1 348955 349698 R hypothetical protein complement(348955..349698) Chlamydia trachomatis L2b/UCH-1/proctitis 5859674 YP_001653373.1 CDS rpmE2 NC_010280.1 349774 350100 D RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 type B 349774..350100 Chlamydia trachomatis L2b/UCH-1/proctitis 5859264 YP_001653374.1 CDS prfA NC_010280.1 350288 351367 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 350288..351367 Chlamydia trachomatis L2b/UCH-1/proctitis 5859736 YP_001653375.1 CDS CTLon_0274 NC_010280.1 351351 352223 D HemK; PrmC; transfers a methyl group from S-adenosyl-methionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB possibly stimulating release of completed polypeptide chains; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 351351..352223 Chlamydia trachomatis L2b/UCH-1/proctitis 5859741 YP_001653376.1 CDS ffh NC_010280.1 352220 353566 D signal recognition particle, subunit FFH/SRP54 352220..353566 Chlamydia trachomatis L2b/UCH-1/proctitis 5859263 YP_001653377.1 CDS rpsP NC_010280.1 353557 353907 D binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 353557..353907 Chlamydia trachomatis L2b/UCH-1/proctitis 5859462 YP_001653378.1 CDS trmD NC_010280.1 353923 354981 D methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; Chlamydial proteins show a C-terminal extension of unknown function; tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein 353923..354981 Chlamydia trachomatis L2b/UCH-1/proctitis 5859643 YP_001653379.1 CDS rplS NC_010280.1 355007 355372 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 355007..355372 Chlamydia trachomatis L2b/UCH-1/proctitis 5859546 YP_001653380.1 CDS rnhB NC_010280.1 355436 356089 D RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 355436..356089 Chlamydia trachomatis L2b/UCH-1/proctitis 5859664 YP_001653381.1 CDS gmk NC_010280.1 356080 356697 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 356080..356697 Chlamydia trachomatis L2b/UCH-1/proctitis 5859104 YP_001653382.1 CDS CTLon_0281 NC_010280.1 356690 356992 D hypothetical protein 356690..356992 Chlamydia trachomatis L2b/UCH-1/proctitis 5859587 YP_001653383.1 CDS metG NC_010280.1 356992 358644 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 356992..358644 Chlamydia trachomatis L2b/UCH-1/proctitis 5859262 YP_001653384.1 CDS recD NC_010280.1 358783 361023 R exodeoxyribonuclease V alpha chain complement(358783..361023) Chlamydia trachomatis L2b/UCH-1/proctitis 5859558 YP_001653385.1 CDS CTLon_0284 NC_010280.1 361271 362251 R putative membrane transport/efflux protein complement(361271..362251) Chlamydia trachomatis L2b/UCH-1/proctitis 5858978 YP_001653386.1 CDS CTLon_0285 NC_010280.1 362633 363406 D putative protein ligase 362633..363406 Chlamydia trachomatis L2b/UCH-1/proctitis 5859261 YP_001653387.1 CDS CTLon_0286 NC_010280.1 363371 364528 R hypothetical protein complement(363371..364528) Chlamydia trachomatis L2b/UCH-1/proctitis 5859258 YP_001653388.1 CDS CTLon_0288 NC_010280.1 365074 365418 R hypothetical protein complement(365074..365418) Chlamydia trachomatis L2b/UCH-1/proctitis 5859471 YP_001653389.1 CDS dcd NC_010280.1 365440 366012 R Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase complement(365440..366012) Chlamydia trachomatis L2b/UCH-1/proctitis 5859254 YP_001653390.1 CDS CTLon_0290 NC_010280.1 366099 366251 D hypothetical protein 366099..366251 Chlamydia trachomatis L2b/UCH-1/proctitis 5859381 YP_001653391.1 CDS ruvB NC_010280.1 366293 367297 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 366293..367297 Chlamydia trachomatis L2b/UCH-1/proctitis 5859252 YP_001653392.1 CDS CTLon_0292 NC_010280.1 367299 368111 D hypothetical protein 367299..368111 Chlamydia trachomatis L2b/UCH-1/proctitis 5859715 YP_001653393.1 CDS CTLon_0293 NC_010280.1 368173 370173 R putative glycosyl hydrolase complement(368173..370173) Chlamydia trachomatis L2b/UCH-1/proctitis 5859251 YP_001653394.1 CDS CTLon_0294 NC_010280.1 370290 370793 R putative type III secretion system chaperone complement(370290..370793) Chlamydia trachomatis L2b/UCH-1/proctitis 5859250 YP_001653395.1 CDS ssb NC_010280.1 371259 371732 D binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 371259..371732 Chlamydia trachomatis L2b/UCH-1/proctitis 5859249 YP_001653396.1 CDS CTLon_0296 NC_010280.1 372075 373574 D catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 372075..373574 Chlamydia trachomatis L2b/UCH-1/proctitis 5859649 YP_001653397.1 CDS hct2 NC_010280.1 373712 374383 D histone-like protein 2 373712..374383 Chlamydia trachomatis L2b/UCH-1/proctitis 5859248 YP_001653398.1 CDS CTLon_0298 NC_010280.1 374538 375482 D hypothetical protein 374538..375482 Chlamydia trachomatis L2b/UCH-1/proctitis 5859721 YP_001653399.1 CDS CTLon_0299 NC_010280.1 375577 376290 D hypothetical protein 375577..376290 Chlamydia trachomatis L2b/UCH-1/proctitis 5859246 YP_001653400.1 CDS CTLon_0300 NC_010280.1 376381 377853 D hypothetical protein 376381..377853 Chlamydia trachomatis L2b/UCH-1/proctitis 5859245 YP_001653401.1 CDS CTLon_0301 NC_010280.1 377912 379579 R hypothetical protein complement(377912..379579) Chlamydia trachomatis L2b/UCH-1/proctitis 5859244 YP_001653402.1 CDS CTLon_0302 NC_010280.1 379615 381312 R hypothetical protein complement(379615..381312) Chlamydia trachomatis L2b/UCH-1/proctitis 5859242 YP_001653403.1 CDS hemN NC_010280.1 381374 382504 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(381374..382504) Chlamydia trachomatis L2b/UCH-1/proctitis 5859241 YP_001653404.1 CDS CTLon_0304 NC_010280.1 382494 382940 R hypothetical protein complement(382494..382940) Chlamydia trachomatis L2b/UCH-1/proctitis 5859740 YP_001653405.1 CDS sucA NC_010280.1 383272 385983 D SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 383272..385983 Chlamydia trachomatis L2b/UCH-1/proctitis 5859239 YP_001653406.1 CDS sucB NC_010280.1 385987 387084 D component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 385987..387084 Chlamydia trachomatis L2b/UCH-1/proctitis 5859656 YP_001653407.1 CDS CTLon_0307 NC_010280.1 387113 387844 R hypothetical protein complement(387113..387844) Chlamydia trachomatis L2b/UCH-1/proctitis 5859511 YP_001653408.1 CDS gcpE NC_010280.1 387853 389661 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-clclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; these proteins appear to consist of duplicate domains as compared to Escherichia coli IspG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(387853..389661) Chlamydia trachomatis L2b/UCH-1/proctitis 5859238 YP_001653409.1 CDS CTLon_0309 NC_010280.1 389813 390904 R hypothetical protein complement(389813..390904) Chlamydia trachomatis L2b/UCH-1/proctitis 5859552 YP_001653410.1 CDS fer NC_010280.1 390984 391259 R ferredoxin complement(390984..391259) Chlamydia trachomatis L2b/UCH-1/proctitis 5859237 YP_001653411.1 CDS flhA NC_010280.1 391441 393258 D type III secretion system protein 391441..393258 Chlamydia trachomatis L2b/UCH-1/proctitis 5859505 YP_001653412.1 CDS fliA NC_010280.1 393366 394127 D expressed in response to temperature increase; may be involved in expression of genes involved in the developmental cycle of Chlamydia; RNA polymerase sigma factor sigma-28 393366..394127 Chlamydia trachomatis L2b/UCH-1/proctitis 5859469 YP_001653413.1 CDS tyrS NC_010280.1 394286 395524 D catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 394286..395524 Chlamydia trachomatis L2b/UCH-1/proctitis 5859468 YP_001653414.1 CDS gnd NC_010280.1 395534 396976 D catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 395534..396976 Chlamydia trachomatis L2b/UCH-1/proctitis 5859078 YP_001653415.1 CDS lepA NC_010280.1 397037 398845 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(397037..398845) Chlamydia trachomatis L2b/UCH-1/proctitis 5859603 YP_001653416.1 CDS CTLon_0316 NC_010280.1 399031 400617 R ADP,ATP carrier protein complement(399031..400617) Chlamydia trachomatis L2b/UCH-1/proctitis 5859672 YP_001653417.1 CDS CTLon_0317 NC_010280.1 400970 401446 R hypothetical protein complement(400970..401446) Chlamydia trachomatis L2b/UCH-1/proctitis 5859236 YP_001653418.1 CDS CTLon_0318 NC_010280.1 402107 403087 D ABC transport protein, solute binding component 402107..403087 Chlamydia trachomatis L2b/UCH-1/proctitis 5859234 YP_001653419.1 CDS CTLon_0319 NC_010280.1 403080 403859 D ABC transport protein, ATP-binding component 403080..403859 Chlamydia trachomatis L2b/UCH-1/proctitis 5859231 YP_001653420.1 CDS CTLon_0320 NC_010280.1 403860 405215 D ABC transport protein, membrane permease 403860..405215 Chlamydia trachomatis L2b/UCH-1/proctitis 5859230 YP_001653421.1 CDS CTLon_0321 NC_010280.1 405205 406161 D ABC transport protein, membrane permease 405205..406161 Chlamydia trachomatis L2b/UCH-1/proctitis 5859229 YP_001653422.1 CDS dxr NC_010280.1 406188 407327 D catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 406188..407327 Chlamydia trachomatis L2b/UCH-1/proctitis 5859225 YP_001653423.1 CDS CTLon_0323 NC_010280.1 407523 409382 D putative protease 407523..409382 Chlamydia trachomatis L2b/UCH-1/proctitis 5859427 YP_001653424.1 CDS CTLon_0324 NC_010280.1 409329 410306 R exported protein complement(409329..410306) Chlamydia trachomatis L2b/UCH-1/proctitis 5859223 YP_001653425.1 CDS recF NC_010280.1 410464 411561 R Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F complement(410464..411561) Chlamydia trachomatis L2b/UCH-1/proctitis 5859222 YP_001653426.1 CDS dnaN NC_010280.1 411561 412811 R binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta complement(411561..412811) Chlamydia trachomatis L2b/UCH-1/proctitis 5858986 YP_001653427.1 CDS smpB NC_010280.1 412941 413396 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 412941..413396 Chlamydia trachomatis L2b/UCH-1/proctitis 5859402 YP_001653428.1 CDS apbE NC_010280.1 413374 414324 R thiamine biosynthesis lipoprotein complement(413374..414324) Chlamydia trachomatis L2b/UCH-1/proctitis 5859271 YP_001653429.1 CDS folD NC_010280.1 414294 415157 R catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(414294..415157) Chlamydia trachomatis L2b/UCH-1/proctitis 5858864 YP_001653430.1 CDS CTLon_0330 NC_010280.1 415275 415670 R putative integral membrane protein complement(415275..415670) Chlamydia trachomatis L2b/UCH-1/proctitis 5859517 YP_001653431.1 CDS ltuB NC_010280.1 415995 416288 D late transcription unit B protein 415995..416288 Chlamydia trachomatis L2b/UCH-1/proctitis 5859221 YP_001653432.1 CDS CTLon_0332 NC_010280.1 416321 416641 D hypothetical protein 416321..416641 Chlamydia trachomatis L2b/UCH-1/proctitis 5859574 YP_001653433.1 CDS CTLon_0333 NC_010280.1 416651 418333 D hypothetical protein 416651..418333 Chlamydia trachomatis L2b/UCH-1/proctitis 5859220 YP_001653434.1 CDS CTLon_0334 NC_010280.1 418330 418812 D hypothetical protein 418330..418812 Chlamydia trachomatis L2b/UCH-1/proctitis 5859219 YP_001653435.1 CDS CTLon_0335 NC_010280.1 418826 419911 R phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein complement(418826..419911) Chlamydia trachomatis L2b/UCH-1/proctitis 5859217 YP_001653436.1 CDS CTLon_0336 NC_010280.1 420083 421822 R putative decarboxylase complement(420083..421822) Chlamydia trachomatis L2b/UCH-1/proctitis 5859216 YP_001653437.1 CDS rpmB NC_010280.1 421942 422211 R required for 70S ribosome assembly; 50S ribosomal protein L28 complement(421942..422211) Chlamydia trachomatis L2b/UCH-1/proctitis 5859215 YP_001653438.1 CDS malQ NC_010280.1 422360 423943 R amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase complement(422360..423943) Chlamydia trachomatis L2b/UCH-1/proctitis 5859717 YP_001653439.1 CDS scc1 NC_010280.1 423947 424387 R type III secretion chaperone complement(423947..424387) Chlamydia trachomatis L2b/UCH-1/proctitis 5859569 YP_001653440.1 CDS copN NC_010280.1 424425 425690 R low calcium response protein E (TTSS effector protein) complement(424425..425690) Chlamydia trachomatis L2b/UCH-1/proctitis 5859311 YP_001653441.1 CDS lcrD NC_010280.1 425708 427834 R low calcium response protein D ( to be part of the TTSS apparatus) complement(425708..427834) Chlamydia trachomatis L2b/UCH-1/proctitis 5859350 YP_001653442.1 CDS sctU NC_010280.1 427834 428916 R type III secretion system protein complement(427834..428916) Chlamydia trachomatis L2b/UCH-1/proctitis 5859679 YP_001653443.1 CDS CTLon_0343 NC_010280.1 429173 430273 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 429173..430273 Chlamydia trachomatis L2b/UCH-1/proctitis 5859713 YP_001653444.1 CDS ribF NC_010280.1 430282 431187 R catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase complement(430282..431187) Chlamydia trachomatis L2b/UCH-1/proctitis 5859214 YP_001653445.1 CDS truB NC_010280.1 431144 431869 R catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B complement(431144..431869) Chlamydia trachomatis L2b/UCH-1/proctitis 5859087 YP_001653446.1 CDS rbfA NC_010280.1 431907 432278 R associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A complement(431907..432278) Chlamydia trachomatis L2b/UCH-1/proctitis 5859346 YP_001653447.1 CDS infB NC_010280.1 432285 434975 R Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 complement(432285..434975) Chlamydia trachomatis L2b/UCH-1/proctitis 5858942 YP_001653448.1 CDS nusA NC_010280.1 434932 436236 R modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA complement(434932..436236) Chlamydia trachomatis L2b/UCH-1/proctitis 5859725 YP_001653449.1 CDS rpsA NC_010280.1 436354 438063 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(436354..438063) Chlamydia trachomatis L2b/UCH-1/proctitis 5859444 YP_001653450.1 CDS trxB NC_010280.1 438308 439363 D thioredoxin reductase 438308..439363 Chlamydia trachomatis L2b/UCH-1/proctitis 5858858 YP_001653451.1 CDS acpS NC_010280.1 439369 439728 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 439369..439728 Chlamydia trachomatis L2b/UCH-1/proctitis 5859321 YP_001653452.1 CDS CTLon_0352 NC_010280.1 439729 440190 R hypothetical protein complement(439729..440190) Chlamydia trachomatis L2b/UCH-1/proctitis 5858874 YP_001653453.1 CDS CTLon_0353 NC_010280.1 440326 440787 D hypothetical protein 440326..440787 Chlamydia trachomatis L2b/UCH-1/proctitis 5859213 YP_001653454.1 CDS CTLon_0354 NC_010280.1 440822 441718 D Note the Pfam PF08282;haloacid dehalogenase-like hydrolase motif; hypothetical protein 440822..441718 Chlamydia trachomatis L2b/UCH-1/proctitis 5859212 YP_001653455.1 CDS fabI NC_010280.1 441708 442604 R Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase complement(441708..442604) Chlamydia trachomatis L2b/UCH-1/proctitis 5859211 YP_001653456.1 CDS CTLon_0356 NC_010280.1 442916 444886 D hypothetical protein 442916..444886 Chlamydia trachomatis L2b/UCH-1/proctitis 5859448 YP_001653457.1 CDS CTLon_0357 NC_010280.1 445086 445910 R tRNA pseudouridine synthase A complement(445086..445910) Chlamydia trachomatis L2b/UCH-1/proctitis 5859210 YP_001653458.1 CDS CTLon_0358 NC_010280.1 445957 447063 D putative DNA glycosylase 445957..447063 Chlamydia trachomatis L2b/UCH-1/proctitis 5859209 YP_001653459.1 CDS CTLon_0359 NC_010280.1 447117 447872 D Note the Pfam PF01784, NIF3 (NGG1p interacting factor 3); hypothetical protein 447117..447872 Chlamydia trachomatis L2b/UCH-1/proctitis 5859208 YP_001653460.1 CDS CTLon_0360 NC_010280.1 447885 448673 R hypothetical protein complement(447885..448673) Chlamydia trachomatis L2b/UCH-1/proctitis 5859207 YP_001653461.1 CDS groEL NC_010280.1 448802 450436 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL complement(448802..450436) Chlamydia trachomatis L2b/UCH-1/proctitis 5859206 YP_001653462.1 CDS groES NC_010280.1 450475 450783 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(450475..450783) Chlamydia trachomatis L2b/UCH-1/proctitis 5859256 YP_001653463.1 CDS pepF NC_010280.1 450955 452781 R oligoendopeptidase F complement(450955..452781) Chlamydia trachomatis L2b/UCH-1/proctitis 5859678 YP_001653464.1 CDS clpB NC_010280.1 453083 455686 D chaperone-protease ClpB 453083..455686 Chlamydia trachomatis L2b/UCH-1/proctitis 5859200 YP_001653465.1 CDS CTLon_0365 NC_010280.1 455712 457172 D hypothetical protein 455712..457172 Chlamydia trachomatis L2b/UCH-1/proctitis 5859323 YP_001653466.1 CDS incD NC_010280.1 457358 457840 D inclusion membrane protein D 457358..457840 Chlamydia trachomatis L2b/UCH-1/proctitis 5859205 YP_001653467.1 CDS incE NC_010280.1 457907 458305 D inclusion membrane protein E 457907..458305 Chlamydia trachomatis L2b/UCH-1/proctitis 5859733 YP_001653468.1 CDS incF NC_010280.1 458310 458624 D inclusion membrane protein F 458310..458624 Chlamydia trachomatis L2b/UCH-1/proctitis 5859734 YP_001653469.1 CDS incG NC_010280.1 458711 459214 D inclusion membrane protein G 458711..459214 Chlamydia trachomatis L2b/UCH-1/proctitis 5859729 YP_001653470.1 CDS incA NC_010280.1 459380 460120 R inclusion membrane protein A complement(459380..460120) Chlamydia trachomatis L2b/UCH-1/proctitis 5859730 YP_001653471.1 CDS CTLon_0371 NC_010280.1 460247 460522 R hypothetical protein complement(460247..460522) Chlamydia trachomatis L2b/UCH-1/proctitis 5859766 YP_001653472.1 CDS araD NC_010280.1 460621 461307 D catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 460621..461307 Chlamydia trachomatis L2b/UCH-1/proctitis 5859204 YP_001653473.1 CDS efp NC_010280.1 461294 461851 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 461294..461851 Chlamydia trachomatis L2b/UCH-1/proctitis 5858863 YP_001653474.1 CDS accB NC_010280.1 461864 462358 D composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 461864..462358 Chlamydia trachomatis L2b/UCH-1/proctitis 5859432 YP_001653475.1 CDS accC NC_010280.1 462362 463735 D an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 462362..463735 Chlamydia trachomatis L2b/UCH-1/proctitis 5858880 YP_001653476.1 CDS rplM NC_010280.1 463958 464410 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 463958..464410 Chlamydia trachomatis L2b/UCH-1/proctitis 5858879 YP_001653477.1 CDS rpsI NC_010280.1 464436 464825 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 464436..464825 Chlamydia trachomatis L2b/UCH-1/proctitis 5859642 YP_001653478.1 CDS CTLon_0378 NC_010280.1 464873 465724 R chitinase complement(464873..465724) Chlamydia trachomatis L2b/UCH-1/proctitis 5859611 YP_001653479.1 CDS adk NC_010280.1 465820 466557 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(465820..466557) Chlamydia trachomatis L2b/UCH-1/proctitis 5859203 YP_001653480.1 CDS CTLon_0380 NC_010280.1 466764 467408 D putative ABC-membrane transport protein, inner membrane component 466764..467408 Chlamydia trachomatis L2b/UCH-1/proctitis 5858872 YP_001653481.1 CDS CTLon_0381 NC_010280.1 467405 468106 D ABC transporter, ATP-binding component 467405..468106 Chlamydia trachomatis L2b/UCH-1/proctitis 5859202 YP_001653482.1 CDS CTLon_0382 NC_010280.1 468109 471525 R hypothetical protein complement(468109..471525) Chlamydia trachomatis L2b/UCH-1/proctitis 5859201 YP_001653483.1 CDS CTLon_0383 NC_010280.1 471522 472799 R Note the Pfam PF03631;Ribonuclease BN-like family; hypothetical protein complement(471522..472799) Chlamydia trachomatis L2b/UCH-1/proctitis 5859199 YP_001653484.1 CDS CTLon_0384 NC_010280.1 472877 473680 R putative methyltransferase complement(472877..473680) Chlamydia trachomatis L2b/UCH-1/proctitis 5859198 YP_001653485.1 CDS CTLon_0385 NC_010280.1 474137 474550 D hypothetical protein 474137..474550 Chlamydia trachomatis L2b/UCH-1/proctitis 5859197 YP_001653486.1 CDS CTLon_0386 NC_010280.1 474608 475690 D hypothetical protein 474608..475690 Chlamydia trachomatis L2b/UCH-1/proctitis 5859195 YP_001653487.1 CDS CTLon_0387 NC_010280.1 475780 476499 D members of this family of proteins have a broad spectrum of activity; putative phospholipase-carboxylesterase family protein 475780..476499 Chlamydia trachomatis L2b/UCH-1/proctitis 5859194 YP_001653488.1 CDS CTLon_0388 NC_010280.1 476518 477363 D note the PFAM motif to yrdC domain PF01300; hypothetical protein 476518..477363 Chlamydia trachomatis L2b/UCH-1/proctitis 5859193 YP_001653489.1 CDS CTLon_0389 NC_010280.1 477341 478288 D microsomal dipeptidase 477341..478288 Chlamydia trachomatis L2b/UCH-1/proctitis 5859192 YP_001653490.1 CDS oppA NC_010280.1 478285 479565 R oligopeptide transport system binding protein complement(478285..479565) Chlamydia trachomatis L2b/UCH-1/proctitis 5859191 YP_001653491.1 CDS CTLon_0391 NC_010280.1 479741 480427 D exported protein 479741..480427 Chlamydia trachomatis L2b/UCH-1/proctitis 5859174 YP_001653492.1 CDS CTLon_0392 NC_010280.1 480611 481057 D protein translocase 480611..481057 Chlamydia trachomatis L2b/UCH-1/proctitis 5859190 YP_001653493.1 CDS CTLon_0393 NC_010280.1 481457 482314 D hypothetical protein 481457..482314 Chlamydia trachomatis L2b/UCH-1/proctitis 5859266 YP_001653494.1 CDS CTLon_0394 NC_010280.1 482316 483158 D hypothetical protein 482316..483158 Chlamydia trachomatis L2b/UCH-1/proctitis 5859188 YP_001653495.1 CDS CTLon_0395 NC_010280.1 483158 484024 D hypothetical protein 483158..484024 Chlamydia trachomatis L2b/UCH-1/proctitis 5859187 YP_001653496.1 CDS pkn1 NC_010280.1 484210 486054 D serine-threonine-protein kinase 484210..486054 Chlamydia trachomatis L2b/UCH-1/proctitis 5859186 YP_001653497.1 CDS ligA NC_010280.1 486065 488056 D this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 486065..488056 Chlamydia trachomatis L2b/UCH-1/proctitis 5859745 YP_001653498.1 CDS CTLon_0398 NC_010280.1 488154 492503 D putative integral membrane protein 488154..492503 Chlamydia trachomatis L2b/UCH-1/proctitis 5859410 YP_001653499.1 CDS mhpA NC_010280.1 492566 494089 R FAD-dependent monooxygenase complement(492566..494089) Chlamydia trachomatis L2b/UCH-1/proctitis 5859185 YP_001653500.1 CDS CTLon_0400 NC_010280.1 494289 495236 R hypothetical protein complement(494289..495236) Chlamydia trachomatis L2b/UCH-1/proctitis 5859554 YP_001653501.1 CDS rpmG NC_010280.1 495635 495793 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 495635..495793 Chlamydia trachomatis L2b/UCH-1/proctitis 5859184 YP_001653502.1 CDS CTLon_0402 NC_010280.1 495829 497340 D lipoprotein releasing systen, inner membrane component 495829..497340 Chlamydia trachomatis L2b/UCH-1/proctitis 5858844 YP_001653503.1 CDS CTLon_0403 NC_010280.1 497345 498022 D lipoprotein release ATP-binding component 497345..498022 Chlamydia trachomatis L2b/UCH-1/proctitis 5859182 YP_001653504.1 CDS CTLon_0404 NC_010280.1 498173 500605 R MAC/perforin family protein complement(498173..500605) Chlamydia trachomatis L2b/UCH-1/proctitis 5859177 YP_001653505.1 CDS CTLon_0406 NC_010280.1 502342 503280 R phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein complement(502342..503280) Chlamydia trachomatis L2b/UCH-1/proctitis 5859175 YP_001653506.1 CDS CTLon_0407 NC_010280.1 503794 504996 R phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein complement(503794..504996) Chlamydia trachomatis L2b/UCH-1/proctitis 5859170 YP_001653507.1 CDS CTLon_0410 NC_010280.1 507345 508091 R hypothetical protein complement(507345..508091) Chlamydia trachomatis L2b/UCH-1/proctitis 5859167 YP_001653508.1 CDS CTLon_0412 NC_010280.1 508703 510232 D Note the motifs for calcium binding and calmodulin-binding domain.; hypothetical protein 508703..510232 Chlamydia trachomatis L2b/UCH-1/proctitis 5859163 YP_001653509.1 CDS CTLon_0413 NC_010280.1 510285 510545 D hypothetical protein 510285..510545 Chlamydia trachomatis L2b/UCH-1/proctitis 5859162 YP_001653510.1 CDS trpR NC_010280.1 511448 511732 D When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription; Trp operon repressor 511448..511732 Chlamydia trachomatis L2b/UCH-1/proctitis 5859159 YP_001653511.1 CDS trpB NC_010280.1 512081 513259 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 512081..513259 Chlamydia trachomatis L2b/UCH-1/proctitis 5859435 YP_001653512.1 CDS trpA NC_010280.1 513252 514013 D tryptophan synthase subunit alpha 513252..514013 Chlamydia trachomatis L2b/UCH-1/proctitis 5859598 YP_001653513.1 CDS CTLon_0419 NC_010280.1 514204 514725 R hypothetical protein complement(514204..514725) Chlamydia trachomatis L2b/UCH-1/proctitis 5859438 YP_001653514.1 CDS CTLon_0420 NC_010280.1 514765 514956 R hypothetical protein complement(514765..514956) Chlamydia trachomatis L2b/UCH-1/proctitis 5859158 YP_001653515.1 CDS oppA2 NC_010280.1 515333 516922 D oligopeptide transport system binding protein 515333..516922 Chlamydia trachomatis L2b/UCH-1/proctitis 5859156 YP_001653516.1 CDS dsbB NC_010280.1 516949 517356 R putative disulfide oxidoreductase complement(516949..517356) Chlamydia trachomatis L2b/UCH-1/proctitis 5859179 YP_001653517.1 CDS dsbG NC_010280.1 517353 518069 R Note the alternate possible translational start site at codon 27.; disulfide bond chaperone complement(517353..518069) Chlamydia trachomatis L2b/UCH-1/proctitis 5859416 YP_001653518.1 CDS CTLon_0425 NC_010280.1 518215 519429 D putative integral membrane protein 518215..519429 Chlamydia trachomatis L2b/UCH-1/proctitis 5859421 YP_001653519.1 CDS CTLon_0426 NC_010280.1 519431 519943 R hypothetical protein complement(519431..519943) Chlamydia trachomatis L2b/UCH-1/proctitis 5859154 YP_001653520.1 CDS CTLon_0427 NC_010280.1 520087 520779 R ABC transporter, ATP-binding protein complement(520087..520779) Chlamydia trachomatis L2b/UCH-1/proctitis 5859153 YP_001653521.1 CDS CTLon_0428 NC_010280.1 521087 521797 R hypothetical protein complement(521087..521797) Chlamydia trachomatis L2b/UCH-1/proctitis 5859571 YP_001653522.1 CDS kdsB NC_010280.1 522165 522929 D CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 522165..522929 Chlamydia trachomatis L2b/UCH-1/proctitis 5859150 YP_001653523.1 CDS pyrG NC_010280.1 522905 524524 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 522905..524524 Chlamydia trachomatis L2b/UCH-1/proctitis 5859683 YP_001653524.1 CDS CTLon_0431 NC_010280.1 524511 524957 D similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 524511..524957 Chlamydia trachomatis L2b/UCH-1/proctitis 5858915 YP_001653525.1 CDS zwf NC_010280.1 525074 526597 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 525074..526597 Chlamydia trachomatis L2b/UCH-1/proctitis 5859149 YP_001653526.1 CDS devB NC_010280.1 526622 527392 D 6-phosphogluconolactonase 526622..527392 Chlamydia trachomatis L2b/UCH-1/proctitis 5859422 YP_001653527.1 CDS dnaX NC_010280.1 527389 528261 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' complement(527389..528261) Chlamydia trachomatis L2b/UCH-1/proctitis 5859383 YP_001653528.1 CDS tmk NC_010280.1 528275 528886 R catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase complement(528275..528886) Chlamydia trachomatis L2b/UCH-1/proctitis 5859405 YP_001653529.1 CDS gyrA NC_010280.1 528888 531398 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A complement(528888..531398) Chlamydia trachomatis L2b/UCH-1/proctitis 5859599 YP_001653530.1 CDS gyrB NC_010280.1 531413 533827 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B complement(531413..533827) Chlamydia trachomatis L2b/UCH-1/proctitis 5859695 YP_001653531.1 CDS CTLon_0438 NC_010280.1 533830 534180 R hypothetical protein complement(533830..534180) Chlamydia trachomatis L2b/UCH-1/proctitis 5859707 YP_001653532.1 CDS CTLon_0439 NC_010280.1 534327 535022 R carries characteristic twin membrane spanning domains; hypothetical protein complement(534327..535022) Chlamydia trachomatis L2b/UCH-1/proctitis 5859147 YP_001653533.1 CDS tgt NC_010280.1 535126 536244 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4, 5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7- deazaguanosine); queuine tRNA-ribosyltransferase complement(535126..536244) Chlamydia trachomatis L2b/UCH-1/proctitis 5859146 YP_001653534.1 CDS mgtE NC_010280.1 536371 537783 R magnesium transport protein complement(536371..537783) Chlamydia trachomatis L2b/UCH-1/proctitis 5859243 YP_001653535.1 CDS CTLon_0442 NC_010280.1 538223 539314 R putative integral membrane protein complement(538223..539314) Chlamydia trachomatis L2b/UCH-1/proctitis 5859553 YP_001653536.1 CDS CTLon_0443 NC_010280.1 539540 539860 D carries characteristic twin membrane spanning domains; hypothetical protein 539540..539860 Chlamydia trachomatis L2b/UCH-1/proctitis 5859144 YP_001653537.1 CDS gcp NC_010280.1 539936 540952 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 539936..540952 Chlamydia trachomatis L2b/UCH-1/proctitis 5859143 YP_001653538.1 CDS oppA3 NC_010280.1 540916 542472 D oligopeptide transport system binding protein 540916..542472 Chlamydia trachomatis L2b/UCH-1/proctitis 5859547 YP_001653539.1 CDS oppB NC_010280.1 542631 543572 D oligopeptide transport system membrane permease 542631..543572 Chlamydia trachomatis L2b/UCH-1/proctitis 5859141 YP_001653540.1 CDS oppC NC_010280.1 543604 544449 D oligopeptide transport system membrane permease 543604..544449 Chlamydia trachomatis L2b/UCH-1/proctitis 5858914 YP_001653541.1 CDS oppD NC_010280.1 544442 545275 D oligopeptide transport system ATP-binding protein 544442..545275 Chlamydia trachomatis L2b/UCH-1/proctitis 5859165 YP_001653542.1 CDS oppF NC_010280.1 545290 546033 D oligopeptide transport system ATP-binding protein 545290..546033 Chlamydia trachomatis L2b/UCH-1/proctitis 5859095 YP_001653543.1 CDS CTLon_0450 NC_010280.1 546345 547094 D hypothetical protein 546345..547094 Chlamydia trachomatis L2b/UCH-1/proctitis 5859164 YP_001653544.1 CDS CTLon_0451 NC_010280.1 547124 548539 D sodium:sulfate symporter 547124..548539 Chlamydia trachomatis L2b/UCH-1/proctitis 5859142 YP_001653545.1 CDS pfkA NC_010280.1 548559 550220 D catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; diphosphate--fructose-6-phosphate 1-phosphotransferase 548559..550220 Chlamydia trachomatis L2b/UCH-1/proctitis 5859140 YP_001653546.1 CDS CTLon_0453 NC_010280.1 550229 551077 D hypothetical protein 550229..551077 Chlamydia trachomatis L2b/UCH-1/proctitis 5859333 YP_001653547.1 CDS pfkA_2 NC_010280.1 551059 552705 D catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; diphosphate--fructose-6-phosphate 1-phosphotransferase 551059..552705 Chlamydia trachomatis L2b/UCH-1/proctitis 5859139 YP_001653548.1 CDS gseA NC_010280.1 552951 554246 R catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase complement(552951..554246) Chlamydia trachomatis L2b/UCH-1/proctitis 5859704 YP_001653549.1 CDS leuS NC_010280.1 554243 556702 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(554243..556702) Chlamydia trachomatis L2b/UCH-1/proctitis 5859682 YP_001653550.1 CDS hemL NC_010280.1 556900 558168 D catalyzes the formation of 5-aminolevulinate from (S)-4-amino-5-oxopentanoate; glutamate-1-semialdehyde aminotransferase 556900..558168 Chlamydia trachomatis L2b/UCH-1/proctitis 5859653 YP_001653551.1 CDS CTLon_0458 NC_010280.1 558160 558729 R hypothetical protein complement(558160..558729) Chlamydia trachomatis L2b/UCH-1/proctitis 5859737 YP_001653552.1 CDS CTLon_0459 NC_010280.1 558749 559195 R hypothetical protein complement(558749..559195) Chlamydia trachomatis L2b/UCH-1/proctitis 5859138 YP_001653553.1 CDS rpiA NC_010280.1 559185 559913 R Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A complement(559185..559913) Chlamydia trachomatis L2b/UCH-1/proctitis 5859137 YP_001653554.1 CDS CTLon_0461 NC_010280.1 560008 561651 R carries characteristic twin membrane spanning domains; hypothetical protein complement(560008..561651) Chlamydia trachomatis L2b/UCH-1/proctitis 5859310 YP_001653555.1 CDS dhnA NC_010280.1 561955 563001 D catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; fructose-bisphosphate aldolase 561955..563001 Chlamydia trachomatis L2b/UCH-1/proctitis 5859135 YP_001653556.1 CDS xasA NC_010280.1 563015 564415 D glutamate/gamma-aminobutyrate antiporter 563015..564415 Chlamydia trachomatis L2b/UCH-1/proctitis 5859386 YP_001653557.1 CDS CTLon_0464 NC_010280.1 564509 565273 D hypothetical protein 564509..565273 Chlamydia trachomatis L2b/UCH-1/proctitis 5858862 YP_001653558.1 CDS surE NC_010280.1 565404 566255 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 565404..566255 Chlamydia trachomatis L2b/UCH-1/proctitis 5859134 YP_001653559.1 CDS ubiA NC_010280.1 566367 567275 D UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; prenyltransferase 566367..567275 Chlamydia trachomatis L2b/UCH-1/proctitis 5859651 YP_001653560.1 CDS CTLon_0467 NC_010280.1 567272 567850 D aromatic acid decarboxylase 567272..567850 Chlamydia trachomatis L2b/UCH-1/proctitis 5859760 YP_001653561.1 CDS CTLon_0468 NC_010280.1 567847 568743 R hypothetical protein complement(567847..568743) Chlamydia trachomatis L2b/UCH-1/proctitis 5859130 YP_001653562.1 CDS CTLon_0469 NC_010280.1 569033 569173 R hypothetical protein complement(569033..569173) Chlamydia trachomatis L2b/UCH-1/proctitis 5859334 YP_001653563.1 CDS CTLon_0470 NC_010280.1 569200 569586 R carries characteristic twin membrane spanning domains; hypothetical protein complement(569200..569586) Chlamydia trachomatis L2b/UCH-1/proctitis 5859128 YP_001653564.1 CDS CTLon_0471 NC_010280.1 569728 570534 R carries characteristic twin membrane spanning domains; hypothetical protein complement(569728..570534) Chlamydia trachomatis L2b/UCH-1/proctitis 5859127 YP_001653565.1 CDS CTLon_0472 NC_010280.1 570926 571369 R carries characteristic twin membrane spanning domains; hypothetical protein complement(570926..571369) Chlamydia trachomatis L2b/UCH-1/proctitis 5859123 YP_001653566.1 CDS CTLon_0473 NC_010280.1 571477 571845 R carries characteristic twin membrane spanning domains; hypothetical protein complement(571477..571845) Chlamydia trachomatis L2b/UCH-1/proctitis 5859122 YP_001653567.1 CDS CTLon_0474 NC_010280.1 571944 572459 R carries characteristic twin membrane spanning domains; hypothetical protein complement(571944..572459) Chlamydia trachomatis L2b/UCH-1/proctitis 5859121 YP_001653568.1 CDS CTLon_0475 NC_010280.1 572588 572989 R carries characteristic twin membrane spanning domains; hypothetical protein complement(572588..572989) Chlamydia trachomatis L2b/UCH-1/proctitis 5859118 YP_001653569.1 CDS CTLon_0476 NC_010280.1 573270 573860 R carries characteristic twin membrane spanning domains; hypothetical protein complement(573270..573860) Chlamydia trachomatis L2b/UCH-1/proctitis 5859117 YP_001653570.1 CDS CTLon_0477 NC_010280.1 574010 574657 R carries characteristic twin membrane spanning domains; hypothetical protein complement(574010..574657) Chlamydia trachomatis L2b/UCH-1/proctitis 5859116 YP_001653571.1 CDS CTLon_0478 NC_010280.1 574883 576130 D putative sodium:dicarboxylate symport protein 574883..576130 Chlamydia trachomatis L2b/UCH-1/proctitis 5859114 YP_001653572.1 CDS CTLon_0479 NC_010280.1 576314 577786 D sodium-dependent amino acid transporter 576314..577786 Chlamydia trachomatis L2b/UCH-1/proctitis 5859113 YP_001653573.1 CDS incB NC_010280.1 577891 578238 D inclusion membrane protein B 577891..578238 Chlamydia trachomatis L2b/UCH-1/proctitis 5859111 YP_001653574.1 CDS incC NC_010280.1 578315 578851 D inclusion membrane protein C 578315..578851 Chlamydia trachomatis L2b/UCH-1/proctitis 5859630 YP_001653575.1 CDS CTLon_0482 NC_010280.1 578909 581695 D putative membrane transport protein 578909..581695 Chlamydia trachomatis L2b/UCH-1/proctitis 5859738 YP_001653576.1 CDS CTLon_0483 NC_010280.1 581724 582137 D Crp family transcriptional regulator 581724..582137 Chlamydia trachomatis L2b/UCH-1/proctitis 5859110 YP_001653577.1 CDS acpP NC_010280.1 582198 582431 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(582198..582431) Chlamydia trachomatis L2b/UCH-1/proctitis 5859109 YP_001653578.1 CDS fabG NC_010280.1 582800 583546 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase complement(582800..583546) Chlamydia trachomatis L2b/UCH-1/proctitis 5858877 YP_001653579.1 CDS fabD NC_010280.1 583543 584469 R malonyl-CoA-[acyl-carrier-protein] transacylase complement(583543..584469) Chlamydia trachomatis L2b/UCH-1/proctitis 5859445 YP_001653580.1 CDS fabH NC_010280.1 584486 585469 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III complement(584486..585469) Chlamydia trachomatis L2b/UCH-1/proctitis 5859436 YP_001653581.1 CDS recR NC_010280.1 585607 586209 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 585607..586209 Chlamydia trachomatis L2b/UCH-1/proctitis 5859442 YP_001653582.1 CDS CTLon_0489 NC_010280.1 586583 588961 D outer membrane protein (variable surface antigen) 586583..588961 Chlamydia trachomatis L2b/UCH-1/proctitis 5859015 YP_001653583.1 CDS ompH NC_010280.1 589028 589549 D Outer membrane protein 589028..589549 Chlamydia trachomatis L2b/UCH-1/proctitis 5859108 YP_001653584.1 CDS lpxD NC_010280.1 589577 590641 D adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 589577..590641 Chlamydia trachomatis L2b/UCH-1/proctitis 5859178 YP_001653585.1 CDS CTLon_0492 NC_010280.1 590638 591834 R hypothetical protein complement(590638..591834) Chlamydia trachomatis L2b/UCH-1/proctitis 5859586 YP_001653586.1 CDS pdhA NC_010280.1 592056 593078 D pyruvate dehydrogenase E1 component alpha subunit 592056..593078 Chlamydia trachomatis L2b/UCH-1/proctitis 5859106 YP_001653587.1 CDS pdhB NC_010280.1 593071 594057 D pyruvate dehydrogenase E1 component beta subunit 593071..594057 Chlamydia trachomatis L2b/UCH-1/proctitis 5859581 YP_001653588.1 CDS pdhC NC_010280.1 594062 595351 D branched-chain alpha-keto acid dehydrogenase subunit E2 594062..595351 Chlamydia trachomatis L2b/UCH-1/proctitis 5859133 YP_001653589.1 CDS glgP NC_010280.1 595378 597822 R glycogen phosphorylase complement(595378..597822) Chlamydia trachomatis L2b/UCH-1/proctitis 5859196 YP_001653590.1 CDS CTLon_0497 NC_010280.1 597978 598328 D hypothetical protein 597978..598328 Chlamydia trachomatis L2b/UCH-1/proctitis 5859565 YP_001653591.1 CDS dnaA NC_010280.1 598382 599752 R binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein complement(598382..599752) Chlamydia trachomatis L2b/UCH-1/proctitis 5859105 YP_001653592.1 CDS oxaA NC_010280.1 599829 602192 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC complement(599829..602192) Chlamydia trachomatis L2b/UCH-1/proctitis 5859388 YP_001653593.1 CDS lgt NC_010280.1 602502 603320 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(602502..603320) Chlamydia trachomatis L2b/UCH-1/proctitis 5859083 YP_001653594.1 CDS CTLon_0501 NC_010280.1 603571 604218 D putative lipoprotein 603571..604218 Chlamydia trachomatis L2b/UCH-1/proctitis 5859661 YP_001653595.1 CDS CTLon_0502 NC_010280.1 604222 604992 D inner membrane protein 604222..604992 Chlamydia trachomatis L2b/UCH-1/proctitis 5859103 YP_001653596.1 CDS CTLon_0503 NC_010280.1 605200 605583 R hypothetical protein complement(605200..605583) Chlamydia trachomatis L2b/UCH-1/proctitis 5859102 YP_001653597.1 CDS CTLon_0504 NC_010280.1 605772 607016 D putative membrane transport protein 605772..607016 Chlamydia trachomatis L2b/UCH-1/proctitis 5859101 YP_001653598.1 CDS CTLon_0505 NC_010280.1 607006 608220 D hypothetical protein 607006..608220 Chlamydia trachomatis L2b/UCH-1/proctitis 5859100 YP_001653599.1 CDS CTLon_0506 NC_010280.1 608224 609348 R putative cysteine desulfurase complement(608224..609348) Chlamydia trachomatis L2b/UCH-1/proctitis 5859099 YP_001653600.1 CDS CTLon_0507 NC_010280.1 609354 610100 R protein phosphatase 2C complement(609354..610100) Chlamydia trachomatis L2b/UCH-1/proctitis 5859098 YP_001653601.1 CDS CTLon_0508 NC_010280.1 610419 610910 D hypothetical protein 610419..610910 Chlamydia trachomatis L2b/UCH-1/proctitis 5859097 YP_001653602.1 CDS dnaQ NC_010280.1 610919 611617 D 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 610919..611617 Chlamydia trachomatis L2b/UCH-1/proctitis 5859096 YP_001653603.1 CDS CTLon_0510 NC_010280.1 611614 612384 D hypothetical protein 611614..612384 Chlamydia trachomatis L2b/UCH-1/proctitis 5859404 YP_001653604.1 CDS CTLon_0511 NC_010280.1 612377 612967 D hypothetical protein 612377..612967 Chlamydia trachomatis L2b/UCH-1/proctitis 5859094 YP_001653605.1 CDS CTLon_0512 NC_010280.1 612988 614928 R ABC transporter, ATP-binding and membrane components complement(612988..614928) Chlamydia trachomatis L2b/UCH-1/proctitis 5859091 YP_001653606.1 CDS accA NC_010280.1 614894 615868 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(614894..615868) Chlamydia trachomatis L2b/UCH-1/proctitis 5859090 YP_001653607.1 CDS CTLon_0514 NC_010280.1 616001 617182 R hypothetical protein complement(616001..617182) Chlamydia trachomatis L2b/UCH-1/proctitis 5858881 YP_001653608.1 CDS ihfA NC_010280.1 617300 617602 R integration host factor alpha-subunit complement(617300..617602) Chlamydia trachomatis L2b/UCH-1/proctitis 5859089 YP_001653609.1 CDS amiA NC_010280.1 617822 618601 R N-acetylmuramoyl-L-alanine amidase complement(617822..618601) Chlamydia trachomatis L2b/UCH-1/proctitis 5859181 YP_001653610.1 CDS murE NC_010280.1 618516 619967 R involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(618516..619967) Chlamydia trachomatis L2b/UCH-1/proctitis 5858867 YP_001653611.1 CDS pbp NC_010280.1 620290 622233 R penicillin-binding protein complement(620290..622233) Chlamydia trachomatis L2b/UCH-1/proctitis 5859523 YP_001653612.1 CDS CTLon_0519 NC_010280.1 622220 622507 R hypothetical protein complement(622220..622507) Chlamydia trachomatis L2b/UCH-1/proctitis 5858911 YP_001653613.1 CDS mraW NC_010280.1 622507 623409 R S-adenosyl-methyltransferase MraW complement(622507..623409) Chlamydia trachomatis L2b/UCH-1/proctitis 5859086 YP_001653614.1 CDS CTLon_0521 NC_010280.1 623687 624253 D hypothetical protein 623687..624253 Chlamydia trachomatis L2b/UCH-1/proctitis 5859541 YP_001653615.1 CDS CTLon_0522 NC_010280.1 624260 624679 D hypothetical protein 624260..624679 Chlamydia trachomatis L2b/UCH-1/proctitis 5859085 YP_001653616.1 CDS dnaA NC_010280.1 624921 626288 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 624921..626288 Chlamydia trachomatis L2b/UCH-1/proctitis 5859082 YP_001653617.1 CDS CTLon_0524 NC_010280.1 626340 626924 D hypothetical protein 626340..626924 Chlamydia trachomatis L2b/UCH-1/proctitis 5859391 YP_001653618.1 CDS CTLon_0525 NC_010280.1 626896 627555 R hypothetical protein complement(626896..627555) Chlamydia trachomatis L2b/UCH-1/proctitis 5859081 YP_001653619.1 CDS nqrB NC_010280.1 627557 629068 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 627557..629068 Chlamydia trachomatis L2b/UCH-1/proctitis 5859077 YP_001653620.1 CDS nqrC NC_010280.1 629072 630022 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 629072..630022 Chlamydia trachomatis L2b/UCH-1/proctitis 5859463 YP_001653621.1 CDS nqrD NC_010280.1 630012 630653 D Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D 630012..630653 Chlamydia trachomatis L2b/UCH-1/proctitis 5859467 YP_001653622.1 CDS nqrE NC_010280.1 630659 631393 D Na(+)-translocating NADH-quinone reductase subunit E 630659..631393 Chlamydia trachomatis L2b/UCH-1/proctitis 5859458 YP_001653623.1 CDS gcsH NC_010280.1 631417 631770 R part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H complement(631417..631770) Chlamydia trachomatis L2b/UCH-1/proctitis 5859461 YP_001653624.1 CDS CTLon_0531 NC_010280.1 631790 633862 R hypothetical protein complement(631790..633862) Chlamydia trachomatis L2b/UCH-1/proctitis 5859557 YP_001653625.1 CDS CTLon_0532 NC_010280.1 634057 635481 R phospholipase D complement(634057..635481) Chlamydia trachomatis L2b/UCH-1/proctitis 5859076 YP_001653626.1 CDS lplA NC_010280.1 635487 636206 R lipoate-protein ligase A complement(635487..636206) Chlamydia trachomatis L2b/UCH-1/proctitis 5859075 YP_001653627.1 CDS clpC NC_010280.1 636471 639035 D ATP-dependent Clp protease 636471..639035 Chlamydia trachomatis L2b/UCH-1/proctitis 5859632 YP_001653628.1 CDS mnmA NC_010280.1 639016 640092 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(639016..640092) Chlamydia trachomatis L2b/UCH-1/proctitis 5859322 YP_001653629.1 CDS CTLon_0536 NC_010280.1 640323 642017 D carries characteristic twin membrane spanning domains; hypothetical protein 640323..642017 Chlamydia trachomatis L2b/UCH-1/proctitis 5859358 YP_001653630.1 CDS CTLon_0537 NC_010280.1 642104 643249 R hypothetical protein complement(642104..643249) Chlamydia trachomatis L2b/UCH-1/proctitis 5859074 YP_001653631.1 CDS CTLon_0538 NC_010280.1 643306 643983 R PTS family membrane transport protein IIA subunit complement(643306..643983) Chlamydia trachomatis L2b/UCH-1/proctitis 5859073 YP_001653632.1 CDS ptsN_2 NC_010280.1 643986 644462 R PTS family membrane transport protein IIA subunit complement(643986..644462) Chlamydia trachomatis L2b/UCH-1/proctitis 5859071 YP_001653633.1 CDS dut NC_010280.1 644464 644901 R catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(644464..644901) Chlamydia trachomatis L2b/UCH-1/proctitis 5858910 YP_001653634.1 CDS accD NC_010280.1 644938 645864 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta complement(644938..645864) Chlamydia trachomatis L2b/UCH-1/proctitis 5859424 YP_001653635.1 CDS sodM NC_010280.1 645935 646555 R superoxide dismutase complement(645935..646555) Chlamydia trachomatis L2b/UCH-1/proctitis 5858878 YP_001653636.1 CDS mrsA NC_010280.1 646687 648468 R phosphoglucomutase complement(646687..648468) Chlamydia trachomatis L2b/UCH-1/proctitis 5859509 YP_001653637.1 CDS CTLon_0544 NC_010280.1 648620 649087 R hypothetical protein complement(648620..649087) Chlamydia trachomatis L2b/UCH-1/proctitis 5859533 YP_001653638.1 CDS rnc NC_010280.1 649196 649891 D cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 649196..649891 Chlamydia trachomatis L2b/UCH-1/proctitis 5859070 YP_001653639.1 CDS radA NC_010280.1 649875 651239 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 649875..651239 Chlamydia trachomatis L2b/UCH-1/proctitis 5859107 YP_001653640.1 CDS hemC NC_010280.1 651283 651942 D transformation of prophobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 651283..651942 Chlamydia trachomatis L2b/UCH-1/proctitis 5858927 YP_001653641.1 CDS pknD NC_010280.1 652738 655542 R PknD; responsible for phosphorylation of proteins on serine and threonine residues; similar to eukaryotic Ser/Thr kinases; in Chlamydia trachomatis itseems to interact with Pkn1, another serine/threonine-protein kinase; serine/threonine-protein kinase complement(652738..655542) Chlamydia trachomatis L2b/UCH-1/proctitis 5859069 YP_001653642.1 CDS valS NC_010280.1 655557 658376 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(655557..658376) Chlamydia trachomatis L2b/UCH-1/proctitis 5859747 YP_001653643.1 CDS CTLon_0551 NC_010280.1 658503 659018 R hypothetical protein complement(658503..659018) Chlamydia trachomatis L2b/UCH-1/proctitis 5859719 YP_001653644.1 CDS atpK NC_010280.1 658939 659364 R produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits; V-type ATP synthase subunit K complement(658939..659364) Chlamydia trachomatis L2b/UCH-1/proctitis 5859068 YP_001653645.1 CDS atpI NC_010280.1 659426 661375 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I is part of the membrane proton channel.; V-type ATP synthase subunit I complement(659426..661375) Chlamydia trachomatis L2b/UCH-1/proctitis 5859596 YP_001653646.1 CDS atpD NC_010280.1 661381 661992 R produces ATP from ADP in the presence of a proton gradient across the membrane; the D subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit D complement(661381..661992) Chlamydia trachomatis L2b/UCH-1/proctitis 5859608 YP_001653647.1 CDS atpB NC_010280.1 661977 663293 R produces ATP from ADP in the presence of a proton gradient across the membrane; the B subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit B complement(661977..663293) Chlamydia trachomatis L2b/UCH-1/proctitis 5859645 YP_001653648.1 CDS atpA NC_010280.1 663296 665071 R produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit A complement(663296..665071) Chlamydia trachomatis L2b/UCH-1/proctitis 5858840 YP_001653649.1 CDS CTLon_0557 NC_010280.1 665065 665865 R hypothetical protein complement(665065..665865) Chlamydia trachomatis L2b/UCH-1/proctitis 5858841 YP_001653650.1 CDS atpE NC_010280.1 666032 666658 R produces ATP from ADP in the presence of a proton gradient across the membrane; the E subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit E complement(666032..666658) Chlamydia trachomatis L2b/UCH-1/proctitis 5859067 YP_001653651.1 CDS CTLon_0559 NC_010280.1 666767 667477 D hypothetical protein 666767..667477 Chlamydia trachomatis L2b/UCH-1/proctitis 5859650 YP_001653652.1 CDS CTLon_0560 NC_010280.1 667485 667856 R hypothetical protein complement(667485..667856) Chlamydia trachomatis L2b/UCH-1/proctitis 5859066 YP_001653653.1 CDS tal NC_010280.1 667901 668884 R transaldolase B complement(667901..668884) Chlamydia trachomatis L2b/UCH-1/proctitis 5859062 YP_001653654.1 CDS rpoC NC_010280.1 668996 673186 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' complement(668996..673186) Chlamydia trachomatis L2b/UCH-1/proctitis 5859218 YP_001653655.1 CDS rpoB NC_010280.1 673211 676969 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(673211..676969) Chlamydia trachomatis L2b/UCH-1/proctitis 5859657 YP_001653656.1 CDS rplL NC_010280.1 677330 677722 R present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 complement(677330..677722) Chlamydia trachomatis L2b/UCH-1/proctitis 5859065 YP_001653657.1 CDS rplJ NC_010280.1 677754 678272 R binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 complement(677754..678272) Chlamydia trachomatis L2b/UCH-1/proctitis 5859514 YP_001653658.1 CDS rplA NC_010280.1 678294 678992 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(678294..678992) Chlamydia trachomatis L2b/UCH-1/proctitis 5859665 YP_001653659.1 CDS rplK NC_010280.1 679015 679440 R binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 complement(679015..679440) Chlamydia trachomatis L2b/UCH-1/proctitis 5859119 YP_001653660.1 CDS nusG NC_010280.1 679546 680094 R Modulates Rho-dependent transcription termination; transcription antitermination protein NusG complement(679546..680094) Chlamydia trachomatis L2b/UCH-1/proctitis 5858870 YP_001653661.1 CDS secE NC_010280.1 680098 680346 R forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE complement(680098..680346) Chlamydia trachomatis L2b/UCH-1/proctitis 5859132 YP_001653662.1 CDS tufA NC_010280.1 680489 681673 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(680489..681673) Chlamydia trachomatis L2b/UCH-1/proctitis 5859640 YP_001653663.1 CDS infA NC_010280.1 682021 682242 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(682021..682242) Chlamydia trachomatis L2b/UCH-1/proctitis 5859662 YP_001653664.1 CDS CTLon_0572 NC_010280.1 682653 683564 D hypothetical protein 682653..683564 Chlamydia trachomatis L2b/UCH-1/proctitis 5859726 YP_001653665.1 CDS CTLon_0573 NC_010280.1 683561 684007 D hypothetical protein 683561..684007 Chlamydia trachomatis L2b/UCH-1/proctitis 5859061 YP_001653666.1 CDS CTLon_0576 NC_010280.1 686220 686402 R hypothetical protein complement(686220..686402) Chlamydia trachomatis L2b/UCH-1/proctitis 5859058 YP_001653667.1 CDS trpC NC_010280.1 687125 687751 R catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase complement(687125..687751) Chlamydia trachomatis L2b/UCH-1/proctitis 5858842 YP_001653668.1 CDS tpiA NC_010280.1 687947 688771 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 687947..688771 Chlamydia trachomatis L2b/UCH-1/proctitis 5859610 YP_001653669.1 CDS xseA NC_010280.1 688785 690335 D bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 688785..690335 Chlamydia trachomatis L2b/UCH-1/proctitis 5859542 YP_001653670.1 CDS xseB NC_010280.1 690319 690537 D catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 690319..690537 Chlamydia trachomatis L2b/UCH-1/proctitis 5858839 YP_001653671.1 CDS CTLon_0581 NC_010280.1 690544 690816 D hypothetical protein 690544..690816 Chlamydia trachomatis L2b/UCH-1/proctitis 5859515 YP_001653672.1 CDS dxs NC_010280.1 690813 692735 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 690813..692735 Chlamydia trachomatis L2b/UCH-1/proctitis 5859056 YP_001653673.1 CDS pykF NC_010280.1 692832 694289 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 692832..694289 Chlamydia trachomatis L2b/UCH-1/proctitis 5859426 YP_001653674.1 CDS uvrA NC_010280.1 694312 699672 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 694312..699672 Chlamydia trachomatis L2b/UCH-1/proctitis 5858923 YP_001653675.1 CDS dnaX NC_010280.1 699890 701290 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 699890..701290 Chlamydia trachomatis L2b/UCH-1/proctitis 5859698 YP_001653676.1 CDS CTLon_0586 NC_010280.1 701283 701573 D hypothetical protein 701283..701573 Chlamydia trachomatis L2b/UCH-1/proctitis 5859409 YP_001653677.1 CDS ptsI NC_010280.1 701583 703298 R phosphoenolpyruvate-protein phosphotransferase complement(701583..703298) Chlamydia trachomatis L2b/UCH-1/proctitis 5859055 YP_001653678.1 CDS ptsH NC_010280.1 703298 703627 R phosphocarrier protein HPr complement(703298..703627) Chlamydia trachomatis L2b/UCH-1/proctitis 5858913 YP_001653679.1 CDS CTLon_0589 NC_010280.1 703765 704226 R hypothetical protein complement(703765..704226) Chlamydia trachomatis L2b/UCH-1/proctitis 5858899 YP_001653680.1 CDS CTLon_0590 NC_010280.1 704283 704465 R hypothetical protein complement(704283..704465) Chlamydia trachomatis L2b/UCH-1/proctitis 5859054 YP_001653681.1 CDS CTLon_0591 NC_010280.1 704510 706039 D hypothetical protein 704510..706039 Chlamydia trachomatis L2b/UCH-1/proctitis 5859053 YP_001653682.1 CDS CTLon_0592 NC_010280.1 706111 708147 R 2-oxoisovalerate dehydrogenase alpha subunit complement(706111..708147) Chlamydia trachomatis L2b/UCH-1/proctitis 5859052 YP_001653683.1 CDS dnaJ NC_010280.1 708182 709360 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(708182..709360) Chlamydia trachomatis L2b/UCH-1/proctitis 5859051 YP_001653684.1 CDS rpsU NC_010280.1 709389 709565 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(709389..709565) Chlamydia trachomatis L2b/UCH-1/proctitis 5859397 YP_001653685.1 CDS CTLon_0595 NC_010280.1 709763 710395 R O-sialoglycoprotein endopeptidase complement(709763..710395) Chlamydia trachomatis L2b/UCH-1/proctitis 5859253 YP_001653686.1 CDS lon NC_010280.1 710705 713164 D ATP-dependent protease La 710705..713164 Chlamydia trachomatis L2b/UCH-1/proctitis 5859050 YP_001653687.1 CDS CTLon_0597 NC_010280.1 713266 713631 D hypothetical protein 713266..713631 Chlamydia trachomatis L2b/UCH-1/proctitis 5859636 YP_001653688.1 CDS CTLon_0598 NC_010280.1 713974 714888 D member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z 713974..714888 Chlamydia trachomatis L2b/UCH-1/proctitis 5859049 YP_001653689.1 CDS xerC NC_010280.1 714950 715897 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 714950..715897 Chlamydia trachomatis L2b/UCH-1/proctitis 5859048 YP_001653690.1 CDS CTLon_0600 NC_010280.1 715951 717540 D ABC transporter, ATP-binding component 715951..717540 Chlamydia trachomatis L2b/UCH-1/proctitis 5859716 YP_001653691.1 CDS CTLon_0601 NC_010280.1 717576 718166 D Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 717576..718166 Chlamydia trachomatis L2b/UCH-1/proctitis 5859047 YP_001653692.1 CDS CTLon_0602 NC_010280.1 718148 719848 D putative lipoprotein 718148..719848 Chlamydia trachomatis L2b/UCH-1/proctitis 5859046 YP_001653693.1 CDS CTLon_0603 NC_010280.1 719855 721957 D hypothetical protein 719855..721957 Chlamydia trachomatis L2b/UCH-1/proctitis 5859044 YP_001653694.1 CDS secG NC_010280.1 722031 722339 R preprotein translocase subunit SecG complement(722031..722339) Chlamydia trachomatis L2b/UCH-1/proctitis 5859043 YP_001653695.1 CDS def NC_010280.1 722495 723040 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(722495..723040) Chlamydia trachomatis L2b/UCH-1/proctitis 5858853 YP_001653696.1 CDS ksgA NC_010280.1 723315 724148 R catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase complement(723315..724148) Chlamydia trachomatis L2b/UCH-1/proctitis 5859379 YP_001653697.1 CDS CTLon_0607 NC_010280.1 724164 725225 R hypothetical protein complement(724164..725225) Chlamydia trachomatis L2b/UCH-1/proctitis 5859685 YP_001653698.1 CDS CTLon_0608 NC_010280.1 725530 727644 R hypothetical protein complement(725530..727644) Chlamydia trachomatis L2b/UCH-1/proctitis 5859042 YP_001653699.1 CDS CTLon_0609 NC_010280.1 728101 728433 D carries characteristic twin membrane spanning domains; hypothetical protein 728101..728433 Chlamydia trachomatis L2b/UCH-1/proctitis 5859604 YP_001653700.1 CDS CTLon_0611 NC_010280.1 729053 729643 R putative inner membrane protein complement(729053..729643) Chlamydia trachomatis L2b/UCH-1/proctitis 5859039 YP_001653701.1 CDS CTLon_0612 NC_010280.1 729895 730521 R hypothetical protein complement(729895..730521) Chlamydia trachomatis L2b/UCH-1/proctitis 5859038 YP_001653702.1 CDS dapA NC_010280.1 730683 731543 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(730683..731543) Chlamydia trachomatis L2b/UCH-1/proctitis 5859036 YP_001653703.1 CDS lysC NC_010280.1 731553 732848 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; aspartate kinase complement(731553..732848) Chlamydia trachomatis L2b/UCH-1/proctitis 5859370 YP_001653704.1 CDS asd NC_010280.1 732841 733845 R catalyzes the formation of aspartate semialdehyde from aspartyl phosphate; aspartate-semialdehyde dehydrogenase complement(732841..733845) Chlamydia trachomatis L2b/UCH-1/proctitis 5859575 YP_001653705.1 CDS dapB NC_010280.1 733855 734616 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(733855..734616) Chlamydia trachomatis L2b/UCH-1/proctitis 5858850 YP_001653706.1 CDS CTLon_0617 NC_010280.1 734793 736520 R putative integral membrane protein complement(734793..736520) Chlamydia trachomatis L2b/UCH-1/proctitis 5859374 YP_001653707.1 CDS aroA NC_010280.1 736690 738012 D catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 736690..738012 Chlamydia trachomatis L2b/UCH-1/proctitis 5859035 YP_001653708.1 CDS aroL NC_010280.1 737954 738508 D catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 737954..738508 Chlamydia trachomatis L2b/UCH-1/proctitis 5858860 YP_001653709.1 CDS aroC NC_010280.1 738501 739574 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 738501..739574 Chlamydia trachomatis L2b/UCH-1/proctitis 5858852 YP_001653710.1 CDS aroB NC_010280.1 739571 740692 D catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 739571..740692 Chlamydia trachomatis L2b/UCH-1/proctitis 5858856 YP_001653711.1 CDS aroDE NC_010280.1 740673 742115 D AroDE; bifunctional enzyme; can convert 3-dehydroquinate to 3-dehydroshkimate and then to shikimate; involved in the synthesis of aromatic amino acids and other metabolites; type I 3-DHQase; bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein 740673..742115 Chlamydia trachomatis L2b/UCH-1/proctitis 5858857 YP_001653712.1 CDS CTLon_0623 NC_010280.1 742157 742942 D hypothetical protein 742157..742942 Chlamydia trachomatis L2b/UCH-1/proctitis 5858855 YP_001653713.1 CDS CTLon_0624 NC_010280.1 743083 744411 D hypothetical protein 743083..744411 Chlamydia trachomatis L2b/UCH-1/proctitis 5859034 YP_001653714.1 CDS CTLon_0626 NC_010280.1 745083 746534 D arginine/ornithine antiporter 745083..746534 Chlamydia trachomatis L2b/UCH-1/proctitis 5859032 YP_001653715.1 CDS CTLon_0627 NC_010280.1 746706 747764 D putative oxidoreductase 746706..747764 Chlamydia trachomatis L2b/UCH-1/proctitis 5859031 YP_001653716.1 CDS mdhC NC_010280.1 747806 748786 R catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase complement(747806..748786) Chlamydia trachomatis L2b/UCH-1/proctitis 5859030 YP_001653717.1 CDS ltuA NC_010280.1 748976 749116 R late transcription unit A protein complement(748976..749116) Chlamydia trachomatis L2b/UCH-1/proctitis 5859564 YP_001653718.1 CDS pgi NC_010280.1 749231 750808 R functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase complement(749231..750808) Chlamydia trachomatis L2b/UCH-1/proctitis 5859578 YP_001653719.1 CDS CTLon_0631 NC_010280.1 750921 752264 R putative nucleotide-binding protein complement(750921..752264) Chlamydia trachomatis L2b/UCH-1/proctitis 5859708 YP_001653720.1 CDS phnP NC_010280.1 752277 753077 R metal-dependent hydrolase complement(752277..753077) Chlamydia trachomatis L2b/UCH-1/proctitis 5859029 YP_001653721.1 CDS artJ NC_010280.1 753106 753879 R arginine transport substrate-binding protein complement(753106..753879) Chlamydia trachomatis L2b/UCH-1/proctitis 5859746 YP_001653722.1 CDS aroG NC_010280.1 753948 754784 R catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase complement(753948..754784) Chlamydia trachomatis L2b/UCH-1/proctitis 5858851 YP_001653723.1 CDS CTLon_0635 NC_010280.1 754921 755112 R hypothetical protein complement(754921..755112) Chlamydia trachomatis L2b/UCH-1/proctitis 5858854 YP_001653724.1 CDS CTLon_0636 NC_010280.1 755295 756026 D hypothetical protein 755295..756026 Chlamydia trachomatis L2b/UCH-1/proctitis 5859028 YP_001653725.1 CDS CTLon_0637 NC_010280.1 756037 757656 R hypothetical protein complement(756037..757656) Chlamydia trachomatis L2b/UCH-1/proctitis 5859027 YP_001653726.1 CDS CTLon_0638 NC_010280.1 757671 758006 R hypothetical protein complement(757671..758006) Chlamydia trachomatis L2b/UCH-1/proctitis 5859026 YP_001653727.1 CDS CTLon_0639 NC_010280.1 758003 758872 R hypothetical protein complement(758003..758872) Chlamydia trachomatis L2b/UCH-1/proctitis 5859025 YP_001653728.1 CDS CTLon_0640 NC_010280.1 759159 761234 D hypothetical protein 759159..761234 Chlamydia trachomatis L2b/UCH-1/proctitis 5859024 YP_001653729.1 CDS CTLon_0641 NC_010280.1 761248 761595 R hypothetical protein complement(761248..761595) Chlamydia trachomatis L2b/UCH-1/proctitis 5859023 YP_001653730.1 CDS CTLon_0642 NC_010280.1 761777 763003 D hypothetical protein 761777..763003 Chlamydia trachomatis L2b/UCH-1/proctitis 5859022 YP_001653731.1 CDS dapL NC_010280.1 763111 764295 D catalyzes the interconversion of tetrahydrodipicolinate and L,L-diaminopimelate in lysine biosynthesis; L,L-diaminopimelate aminotransferase 763111..764295 Chlamydia trachomatis L2b/UCH-1/proctitis 5859021 YP_001653732.1 CDS CTLon_0644 NC_010280.1 764303 765310 D ABC transporter substrate-binding component 764303..765310 Chlamydia trachomatis L2b/UCH-1/proctitis 5859376 YP_001653733.1 CDS CTLon_0645 NC_010280.1 765319 766449 R hypothetical protein complement(765319..766449) Chlamydia trachomatis L2b/UCH-1/proctitis 5859020 YP_001653734.1 CDS proS NC_010280.1 766650 768395 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 766650..768395 Chlamydia trachomatis L2b/UCH-1/proctitis 5859019 YP_001653735.1 CDS hrcA NC_010280.1 768464 769642 D Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 768464..769642 Chlamydia trachomatis L2b/UCH-1/proctitis 5858873 YP_001653736.1 CDS grpE NC_010280.1 769639 770211 D HSP-70 cofactor 769639..770211 Chlamydia trachomatis L2b/UCH-1/proctitis 5859018 YP_001653737.1 CDS dnaK NC_010280.1 770237 772219 D heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 770237..772219 Chlamydia trachomatis L2b/UCH-1/proctitis 5859684 YP_001653738.1 CDS vacB NC_010280.1 772512 774596 D exoribonuclease II 772512..774596 Chlamydia trachomatis L2b/UCH-1/proctitis 5859401 YP_001653739.1 CDS CTLon_0651 NC_010280.1 774852 775616 D hypothetical protein 774852..775616 Chlamydia trachomatis L2b/UCH-1/proctitis 5859670 YP_001653740.1 CDS CTLon_0652 NC_010280.1 776039 777025 R carbohydrate isomerase complement(776039..777025) Chlamydia trachomatis L2b/UCH-1/proctitis 5859017 YP_001653741.1 CDS sucB NC_010280.1 777057 778223 R branched-chain alpha-keto acid dehydrogenase subunit E2 complement(777057..778223) Chlamydia trachomatis L2b/UCH-1/proctitis 5859016 YP_001653742.1 CDS gltT NC_010280.1 778469 779707 R Sodium:dicarboxylate symport protein complement(778469..779707) Chlamydia trachomatis L2b/UCH-1/proctitis 5858969 YP_001653743.1 CDS lpxK NC_010280.1 779704 780813 R transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase complement(779704..780813) Chlamydia trachomatis L2b/UCH-1/proctitis 5859576 YP_001653744.1 CDS CTLon_0656 NC_010280.1 780979 781788 R 23S rRNA methyltransferase complement(780979..781788) Chlamydia trachomatis L2b/UCH-1/proctitis 5859014 YP_001653745.1 CDS CTLon_0657 NC_010280.1 781776 782603 R N6-adenine-specific DNA methylase complement(781776..782603) Chlamydia trachomatis L2b/UCH-1/proctitis 5859013 YP_001653746.1 CDS ribC NC_010280.1 782600 783199 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(782600..783199) Chlamydia trachomatis L2b/UCH-1/proctitis 5859011 YP_001653747.1 CDS nrdR NC_010280.1 783592 784056 D transcriptional regulator NrdR 783592..784056 Chlamydia trachomatis L2b/UCH-1/proctitis 5859037 YP_001653748.1 CDS dksA NC_010280.1 784070 784444 D dnaK suppressor protein 784070..784444 Chlamydia trachomatis L2b/UCH-1/proctitis 5859009 YP_001653749.1 CDS lspA NC_010280.1 784450 784953 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 784450..784953 Chlamydia trachomatis L2b/UCH-1/proctitis 5859387 YP_001653750.1 CDS CTLon_0662 NC_010280.1 785055 786416 D Sodium/alanine symporter protein 785055..786416 Chlamydia trachomatis L2b/UCH-1/proctitis 5859584 YP_001653751.1 CDS pcnB NC_010280.1 786632 787909 D polyA polymerase 786632..787909 Chlamydia trachomatis L2b/UCH-1/proctitis 5859008 YP_001653752.1 CDS lpxB NC_010280.1 787970 789793 D catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate; lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 787970..789793 Chlamydia trachomatis L2b/UCH-1/proctitis 5858897 YP_001653753.1 CDS pmpA NC_010280.1 789900 792827 D polymorphic outer membrane protein 789900..792827 Chlamydia trachomatis L2b/UCH-1/proctitis 5859597 YP_001653754.1 CDS pmpB NC_010280.1 792966 798215 D polymorphic outer membrane protein 792966..798215 Chlamydia trachomatis L2b/UCH-1/proctitis 5859751 YP_001653755.1 CDS pmpC NC_010280.1 798391 803715 D polymorphic outer membrane protein 798391..803715 Chlamydia trachomatis L2b/UCH-1/proctitis 5859754 YP_001653756.1 CDS CTLon_0668 NC_010280.1 804268 805098 D metal transporter, metal-binding component 804268..805098 Chlamydia trachomatis L2b/UCH-1/proctitis 5859658 YP_001653757.1 CDS CTLon_0669 NC_010280.1 805095 805805 D metal transporter, ATP-binding component 805095..805805 Chlamydia trachomatis L2b/UCH-1/proctitis 5859007 YP_001653758.1 CDS CTLon_0670 NC_010280.1 805796 806677 D metal transporter, membrane permease component 805796..806677 Chlamydia trachomatis L2b/UCH-1/proctitis 5859006 YP_001653759.1 CDS obgE NC_010280.1 806593 807600 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(806593..807600) Chlamydia trachomatis L2b/UCH-1/proctitis 5859005 YP_001653760.1 CDS rpmA NC_010280.1 807690 807941 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(807690..807941) Chlamydia trachomatis L2b/UCH-1/proctitis 5859004 YP_001653761.1 CDS rplU NC_010280.1 807972 808295 R 50S ribosomal protein L21 complement(807972..808295) Chlamydia trachomatis L2b/UCH-1/proctitis 5859504 YP_001653762.1 CDS CTLon_0674ae NC_010280.1 808845 809546 D putative inner membrane protein 808845..809546 Chlamydia trachomatis L2b/UCH-1/proctitis 5859508 YP_001653763.1 CDS CTLon_0675af NC_010280.1 809731 809892 D hypothetical protein 809731..809892 Chlamydia trachomatis L2b/UCH-1/proctitis 5859003 YP_001653764.1 CDS CTLon_0676 NC_010280.1 809909 810070 D hypothetical protein 809909..810070 Chlamydia trachomatis L2b/UCH-1/proctitis 5859002 YP_001653765.1 CDS CTLon_0677 NC_010280.1 810084 810569 D hypothetical protein 810084..810569 Chlamydia trachomatis L2b/UCH-1/proctitis 5859001 YP_001653766.1 CDS CTLon_0678 NC_010280.1 810702 811811 D putative cation efflux protein 810702..811811 Chlamydia trachomatis L2b/UCH-1/proctitis 5858999 YP_001653767.1 CDS rsbV NC_010280.1 812000 812350 D anti-sigma F factor antagonist 812000..812350 Chlamydia trachomatis L2b/UCH-1/proctitis 5858998 YP_001653768.1 CDS CTLon_0680 NC_010280.1 812528 814393 D hypothetical protein 812528..814393 Chlamydia trachomatis L2b/UCH-1/proctitis 5859648 YP_001653769.1 CDS CTLon_0681 NC_010280.1 814590 815699 D hypothetical protein 814590..815699 Chlamydia trachomatis L2b/UCH-1/proctitis 5858997 YP_001653770.1 CDS CTLon_0682 NC_010280.1 815672 816493 D hypothetical protein 815672..816493 Chlamydia trachomatis L2b/UCH-1/proctitis 5858996 YP_001653771.1 CDS ubiE NC_010280.1 816429 817118 D Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 816429..817118 Chlamydia trachomatis L2b/UCH-1/proctitis 5858995 YP_001653772.1 CDS CTLon_0684 NC_010280.1 817144 818133 R hypothetical protein complement(817144..818133) Chlamydia trachomatis L2b/UCH-1/proctitis 5859430 YP_001653773.1 CDS dapF NC_010280.1 818194 819021 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(818194..819021) Chlamydia trachomatis L2b/UCH-1/proctitis 5858994 YP_001653774.1 CDS clpP NC_010280.1 818990 819568 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(818990..819568) Chlamydia trachomatis L2b/UCH-1/proctitis 5859378 YP_001653775.1 CDS glyA NC_010280.1 819580 821073 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(819580..821073) Chlamydia trachomatis L2b/UCH-1/proctitis 5859328 YP_001653776.1 CDS hemD NC_010280.1 821437 822108 D catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 821437..822108 Chlamydia trachomatis L2b/UCH-1/proctitis 5859579 YP_001653777.1 CDS ispF NC_010280.1 822211 822747 D catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 822211..822747 Chlamydia trachomatis L2b/UCH-1/proctitis 5858993 YP_001653778.1 CDS CTLon_0690 NC_010280.1 822744 823796 R putative oxidoreductase complement(822744..823796) Chlamydia trachomatis L2b/UCH-1/proctitis 5859694 YP_001653779.1 CDS rpsJ NC_010280.1 823813 824130 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(823813..824130) Chlamydia trachomatis L2b/UCH-1/proctitis 5858992 YP_001653780.1 CDS fusA NC_010280.1 824138 826222 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(824138..826222) Chlamydia trachomatis L2b/UCH-1/proctitis 5859063 YP_001653781.1 CDS rpsG NC_010280.1 826264 826737 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(826264..826737) Chlamydia trachomatis L2b/UCH-1/proctitis 5859535 YP_001653782.1 CDS rpsL NC_010280.1 826787 827176 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(826787..827176) Chlamydia trachomatis L2b/UCH-1/proctitis 5859516 YP_001653783.1 CDS CTLon_0695 NC_010280.1 827418 827756 D hypothetical protein 827418..827756 Chlamydia trachomatis L2b/UCH-1/proctitis 5859441 YP_001653784.1 CDS tsp NC_010280.1 827914 829863 D carboxy-terminal processing protease 827914..829863 Chlamydia trachomatis L2b/UCH-1/proctitis 5858991 YP_001653785.1 CDS crpA NC_010280.1 829970 830422 R cysteine-rich membrane protein complement(829970..830422) Chlamydia trachomatis L2b/UCH-1/proctitis 5859686 YP_001653786.1 CDS omcB NC_010280.1 830600 832261 R 60kD cysteine-rich outer membrane protein complement(830600..832261) Chlamydia trachomatis L2b/UCH-1/proctitis 5859353 YP_001653787.1 CDS omcA NC_010280.1 832408 832674 R cysteine-rich outer membrane protein complement(832408..832674) Chlamydia trachomatis L2b/UCH-1/proctitis 5859148 YP_001653788.1 CDS CTLon_0700 NC_010280.1 833011 833235 D putative lipoprotein 833011..833235 Chlamydia trachomatis L2b/UCH-1/proctitis 5859131 YP_001653789.1 CDS gltX NC_010280.1 833232 834752 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(833232..834752) Chlamydia trachomatis L2b/UCH-1/proctitis 5858990 YP_001653790.1 CDS euo NC_010280.1 835023 835574 R hypothetical protein complement(835023..835574) Chlamydia trachomatis L2b/UCH-1/proctitis 5859580 YP_001653791.1 CDS recJ NC_010280.1 835978 837732 R single-stranded-DNA-specific exonuclease complement(835978..837732) Chlamydia trachomatis L2b/UCH-1/proctitis 5859433 YP_001653792.1 CDS secF NC_010280.1 837850 842052 R part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; in these organisms there is an unknown N-terminal domain; bifunctional preprotein translocase subunit SecD/SecF complement(837850..842052) Chlamydia trachomatis L2b/UCH-1/proctitis 5859010 YP_001653793.1 CDS CTLon_0705 NC_010280.1 842472 842804 R hypothetical protein complement(842472..842804) Chlamydia trachomatis L2b/UCH-1/proctitis 5859639 YP_001653794.1 CDS uppS NC_010280.1 843266 844027 D catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 843266..844027 Chlamydia trachomatis L2b/UCH-1/proctitis 5858989 YP_001653795.1 CDS cdsA NC_010280.1 844033 844950 D phosphatidate cytidylyltransferase 844033..844950 Chlamydia trachomatis L2b/UCH-1/proctitis 5859613 YP_001653796.1 CDS cmk NC_010280.1 844947 845597 D Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 844947..845597 Chlamydia trachomatis L2b/UCH-1/proctitis 5859619 YP_001653797.1 CDS plsC NC_010280.1 845594 846244 D 1-acyl-sn-glycerol-3-phosphate acyltransferase 845594..846244 Chlamydia trachomatis L2b/UCH-1/proctitis 5859332 YP_001653798.1 CDS argS NC_010280.1 846259 847950 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 846259..847950 Chlamydia trachomatis L2b/UCH-1/proctitis 5859749 YP_001653799.1 CDS murA NC_010280.1 847990 849324 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(847990..849324) Chlamydia trachomatis L2b/UCH-1/proctitis 5858861 YP_001653800.1 CDS tarp NC_010280.1 849536 852541 D translocated actin-recruiting protein 849536..852541 Chlamydia trachomatis L2b/UCH-1/proctitis 5859534 YP_001653801.1 CDS CTLon_0713 NC_010280.1 852593 853309 R hypothetical protein complement(852593..853309) Chlamydia trachomatis L2b/UCH-1/proctitis 5859343 YP_001653802.1 CDS CTLon_0714 NC_010280.1 853492 853995 R ribosomal-protein-alanine acetyltransferase complement(853492..853995) Chlamydia trachomatis L2b/UCH-1/proctitis 5858988 YP_001653803.1 CDS prfB NC_010280.1 853992 855099 R recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 complement(join(853992..855029,855031..855099)) Chlamydia trachomatis L2b/UCH-1/proctitis 5858987 YP_001653804.1 CDS CTLon_0716 NC_010280.1 855419 855679 D Note the Pfam PF02201;SWIB-MDM2 domain.; hypothetical protein 855419..855679 Chlamydia trachomatis L2b/UCH-1/proctitis 5858859 YP_001653805.1 CDS CTLon_0717 NC_010280.1 855737 856726 D putative metallo-phosphoesterase 855737..856726 Chlamydia trachomatis L2b/UCH-1/proctitis 5858985 YP_001653806.1 CDS ispD NC_010280.1 856716 857375 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 856716..857375 Chlamydia trachomatis L2b/UCH-1/proctitis 5858984 YP_001653807.1 CDS truA NC_010280.1 857384 858187 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 857384..858187 Chlamydia trachomatis L2b/UCH-1/proctitis 5859703 YP_001653808.1 CDS CTLon_0720 NC_010280.1 858139 858813 R HAD superfamily hydrolase complement(858139..858813) Chlamydia trachomatis L2b/UCH-1/proctitis 5859677 YP_001653809.1 CDS CTLon_0721 NC_010280.1 858906 859547 D hypothetical protein 858906..859547 Chlamydia trachomatis L2b/UCH-1/proctitis 5858983 YP_001653810.1 CDS CTLon_0722 NC_010280.1 859841 860170 D hypothetical protein 859841..860170 Chlamydia trachomatis L2b/UCH-1/proctitis 5859226 YP_001653811.1 CDS atoS NC_010280.1 860148 861206 D two component regulator, histidine kinase 860148..861206 Chlamydia trachomatis L2b/UCH-1/proctitis 5858980 YP_001653812.1 CDS atoC NC_010280.1 861249 862409 D two component system response regulator 861249..862409 Chlamydia trachomatis L2b/UCH-1/proctitis 5858843 YP_001653813.1 CDS CTLon_0725 NC_010280.1 862636 863172 D hypothetical protein 862636..863172 Chlamydia trachomatis L2b/UCH-1/proctitis 5859556 YP_001653814.1 CDS recO NC_010280.1 863142 863873 D involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 863142..863873 Chlamydia trachomatis L2b/UCH-1/proctitis 5858979 YP_001653815.1 CDS CTLon_0727 NC_010280.1 863870 864472 R hypothetical protein complement(863870..864472) Chlamydia trachomatis L2b/UCH-1/proctitis 5859000 YP_001653816.1 CDS CTLon_0728 NC_010280.1 864950 865744 D hypothetical protein 864950..865744 Chlamydia trachomatis L2b/UCH-1/proctitis 5859577 YP_001653817.1 CDS CTLon_0729 NC_010280.1 865750 866064 D hypothetical protein 865750..866064 Chlamydia trachomatis L2b/UCH-1/proctitis 5858974 YP_001653818.1 CDS CTLon_0730 NC_010280.1 866003 866932 R hypothetical protein complement(866003..866932) Chlamydia trachomatis L2b/UCH-1/proctitis 5858973 YP_001653819.1 CDS pheT NC_010280.1 867020 869392 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 867020..869392 Chlamydia trachomatis L2b/UCH-1/proctitis 5858972 YP_001653820.1 CDS CTLon_0732 NC_010280.1 869389 870354 D hypothetical protein 869389..870354 Chlamydia trachomatis L2b/UCH-1/proctitis 5859743 YP_001653821.1 CDS CTLon_0733 NC_010280.1 870373 870885 D putative DNA methyltransferase 870373..870885 Chlamydia trachomatis L2b/UCH-1/proctitis 5858971 YP_001653822.1 CDS oppC2 NC_010280.1 870882 872618 R oligonucleotide transport system permease complement(870882..872618) Chlamydia trachomatis L2b/UCH-1/proctitis 5858970 YP_001653823.1 CDS oppB2 NC_010280.1 872620 874035 R oligopeptide transport system membrane permease complement(872620..874035) Chlamydia trachomatis L2b/UCH-1/proctitis 5858918 YP_001653824.1 CDS oppA4 NC_010280.1 874080 876170 R oligopeptide transport system, binding protein complement(874080..876170) Chlamydia trachomatis L2b/UCH-1/proctitis 5859582 YP_001653825.1 CDS CTLon_0737 NC_010280.1 876776 877507 R hypothetical protein complement(876776..877507) Chlamydia trachomatis L2b/UCH-1/proctitis 5859180 YP_001653826.1 CDS CTLon_0738 NC_010280.1 877669 878322 R hypothetical protein complement(877669..878322) Chlamydia trachomatis L2b/UCH-1/proctitis 5858968 YP_001653827.1 CDS CTLon_0739 NC_010280.1 878790 879155 D hypothetical protein 878790..879155 Chlamydia trachomatis L2b/UCH-1/proctitis 5858966 YP_001653828.1 CDS CTLon_0740 NC_010280.1 879134 880132 R hypothetical protein complement(879134..880132) Chlamydia trachomatis L2b/UCH-1/proctitis 5858965 YP_001653829.1 CDS hemH NC_010280.1 880289 881233 R protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase complement(880289..881233) Chlamydia trachomatis L2b/UCH-1/proctitis 5858964 YP_001653830.1 CDS fliY NC_010280.1 881255 882040 R glutamine-binding protein complement(881255..882040) Chlamydia trachomatis L2b/UCH-1/proctitis 5859739 YP_001653831.1 CDS CTLon_0743 NC_010280.1 882086 882658 R methyltransferase complement(882086..882658) Chlamydia trachomatis L2b/UCH-1/proctitis 5859501 YP_001653832.1 CDS CTLon_0744 NC_010280.1 882655 883389 R putative phosphohydrolase complement(882655..883389) Chlamydia trachomatis L2b/UCH-1/proctitis 5858963 YP_001653833.1 CDS glgC NC_010280.1 883478 884803 R glucose-1-phosphate adenylyltransferase complement(883478..884803) Chlamydia trachomatis L2b/UCH-1/proctitis 5858961 YP_001653834.1 CDS CTLon_0746 NC_010280.1 884994 885245 D hypothetical protein 884994..885245 Chlamydia trachomatis L2b/UCH-1/proctitis 5859567 YP_001653835.1 CDS rho NC_010280.1 885255 886649 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(885255..886649) Chlamydia trachomatis L2b/UCH-1/proctitis 5858960 YP_001653836.1 CDS coaE NC_010280.1 886646 887254 R catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase complement(886646..887254) Chlamydia trachomatis L2b/UCH-1/proctitis 5859012 YP_001653837.1 CDS polA NC_010280.1 887248 889848 R has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I complement(887248..889848) Chlamydia trachomatis L2b/UCH-1/proctitis 5858959 YP_001653838.1 CDS sohB NC_010280.1 889865 890860 R exported protease IV complement(889865..890860) Chlamydia trachomatis L2b/UCH-1/proctitis 5859764 YP_001653839.1 CDS CTLon_0751 NC_010280.1 891000 892622 R putative nucleotide transport protein complement(891000..892622) Chlamydia trachomatis L2b/UCH-1/proctitis 5859759 YP_001653840.1 CDS pgsA NC_010280.1 892834 893340 R CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(892834..893340) Chlamydia trachomatis L2b/UCH-1/proctitis 5858958 YP_001653841.1 CDS CTLon_0753 NC_010280.1 893736 893885 R hypothetical protein complement(893736..893885) Chlamydia trachomatis L2b/UCH-1/proctitis 5859440 YP_001653842.1 CDS dnaB NC_010280.1 893854 895272 D unwinds double stranded DNA; replicative DNA helicase 893854..895272 Chlamydia trachomatis L2b/UCH-1/proctitis 5858957 YP_001653843.1 CDS gidA NC_010280.1 895567 897399 D GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 895567..897399 Chlamydia trachomatis L2b/UCH-1/proctitis 5859390 YP_001653844.1 CDS lplA NC_010280.1 897389 898090 D lipoate-protein ligase A 897389..898090 Chlamydia trachomatis L2b/UCH-1/proctitis 5859555 YP_001653845.1 CDS ndk NC_010280.1 898147 898572 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(898147..898572) Chlamydia trachomatis L2b/UCH-1/proctitis 5859606 YP_001653846.1 CDS ruvA NC_010280.1 898732 899334 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(898732..899334) Chlamydia trachomatis L2b/UCH-1/proctitis 5859497 YP_001653847.1 CDS ruvC NC_010280.1 899354 899866 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(899354..899866) Chlamydia trachomatis L2b/UCH-1/proctitis 5859646 YP_001653848.1 CDS CTLon_0760 NC_010280.1 899974 900423 R hypothetical protein complement(899974..900423) Chlamydia trachomatis L2b/UCH-1/proctitis 5859769 YP_001653849.1 CDS CTLon_0761 NC_010280.1 900815 901681 R hypothetical protein complement(900815..901681) Chlamydia trachomatis L2b/UCH-1/proctitis 5859452 YP_001653850.1 CDS gapA NC_010280.1 901692 902696 R glyceraldehyde 3-phosphate dehydrogenase complement(901692..902696) Chlamydia trachomatis L2b/UCH-1/proctitis 5858955 YP_001653851.1 CDS rplQ NC_010280.1 902740 903165 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(902740..903165) Chlamydia trachomatis L2b/UCH-1/proctitis 5859540 YP_001653852.1 CDS rpoA NC_010280.1 903174 904307 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(903174..904307) Chlamydia trachomatis L2b/UCH-1/proctitis 5859502 YP_001653853.1 CDS rpsK NC_010280.1 904328 904726 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(904328..904726) Chlamydia trachomatis L2b/UCH-1/proctitis 5859614 YP_001653854.1 CDS rpsM NC_010280.1 904748 905116 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(904748..905116) Chlamydia trachomatis L2b/UCH-1/proctitis 5859770 YP_001653855.1 CDS secY NC_010280.1 905172 906545 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(905172..906545) Chlamydia trachomatis L2b/UCH-1/proctitis 5859273 YP_001653856.1 CDS rplO NC_010280.1 906568 907002 R late assembly protein; 50S ribosomal protein L15 complement(906568..907002) Chlamydia trachomatis L2b/UCH-1/proctitis 5859628 YP_001653857.1 CDS rpsE NC_010280.1 906995 907492 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(906995..907492) Chlamydia trachomatis L2b/UCH-1/proctitis 5859084 YP_001653858.1 CDS rplR NC_010280.1 907507 907878 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(907507..907878) Chlamydia trachomatis L2b/UCH-1/proctitis 5859080 YP_001653859.1 CDS rplF NC_010280.1 907900 908451 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(907900..908451) Chlamydia trachomatis L2b/UCH-1/proctitis 5859702 YP_001653860.1 CDS rpsH NC_010280.1 908479 908880 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(908479..908880) Chlamydia trachomatis L2b/UCH-1/proctitis 5859224 YP_001653861.1 CDS rplE NC_010280.1 908898 909440 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(908898..909440) Chlamydia trachomatis L2b/UCH-1/proctitis 5859622 YP_001653862.1 CDS rplX NC_010280.1 909442 909777 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(909442..909777) Chlamydia trachomatis L2b/UCH-1/proctitis 5859711 YP_001653863.1 CDS rplN NC_010280.1 909790 910158 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(909790..910158) Chlamydia trachomatis L2b/UCH-1/proctitis 5859260 YP_001653864.1 CDS rpsQ NC_010280.1 910175 910426 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(910175..910426) Chlamydia trachomatis L2b/UCH-1/proctitis 5859550 YP_001653865.1 CDS rpmC NC_010280.1 910419 910637 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(910419..910637) Chlamydia trachomatis L2b/UCH-1/proctitis 5859618 YP_001653866.1 CDS rplP NC_010280.1 910639 911055 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(910639..911055) Chlamydia trachomatis L2b/UCH-1/proctitis 5859274 YP_001653867.1 CDS rpsC NC_010280.1 911088 911762 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(911088..911762) Chlamydia trachomatis L2b/UCH-1/proctitis 5859693 YP_001653868.1 CDS rplV NC_010280.1 911772 912107 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(911772..912107) Chlamydia trachomatis L2b/UCH-1/proctitis 5859344 YP_001653869.1 CDS rpsS NC_010280.1 912126 912392 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(912126..912392) Chlamydia trachomatis L2b/UCH-1/proctitis 5859617 YP_001653870.1 CDS rplB NC_010280.1 912398 913252 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(912398..913252) Chlamydia trachomatis L2b/UCH-1/proctitis 5859172 YP_001653871.1 CDS rplW NC_010280.1 913276 913611 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(913276..913611) Chlamydia trachomatis L2b/UCH-1/proctitis 5859626 YP_001653872.1 CDS rplD NC_010280.1 913627 914295 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(913627..914295) Chlamydia trachomatis L2b/UCH-1/proctitis 5859666 YP_001653873.1 CDS rplC NC_010280.1 914304 914969 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(914304..914969) Chlamydia trachomatis L2b/UCH-1/proctitis 5859232 YP_001653874.1 CDS CTLon_0786 NC_010280.1 915404 916300 R hypothetical protein complement(915404..916300) Chlamydia trachomatis L2b/UCH-1/proctitis 5859616 YP_001653875.1 CDS fmt NC_010280.1 916466 917416 R modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase complement(916466..917416) Chlamydia trachomatis L2b/UCH-1/proctitis 5858954 YP_001653876.1 CDS lpxA NC_010280.1 917406 918248 R catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase complement(917406..918248) Chlamydia trachomatis L2b/UCH-1/proctitis 5859493 YP_001653877.1 CDS fabZ NC_010280.1 918260 918721 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(918260..918721) Chlamydia trachomatis L2b/UCH-1/proctitis 5859607 YP_001653878.1 CDS lpxC NC_010280.1 918718 919578 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(918718..919578) Chlamydia trachomatis L2b/UCH-1/proctitis 5859454 YP_001653879.1 CDS lnt NC_010280.1 919677 921305 R Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase complement(919677..921305) Chlamydia trachomatis L2b/UCH-1/proctitis 5859602 YP_001653880.1 CDS CTLon_0792 NC_010280.1 921369 921851 R acyl-CoA hydrolase complement(921369..921851) Chlamydia trachomatis L2b/UCH-1/proctitis 5859352 YP_001653881.1 CDS dnaQ2 NC_010280.1 921987 922739 R 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon complement(921987..922739) Chlamydia trachomatis L2b/UCH-1/proctitis 5858953 YP_001653882.1 CDS CTLon_0794 NC_010280.1 922743 923216 R putative nucleotide-binding protein complement(922743..923216) Chlamydia trachomatis L2b/UCH-1/proctitis 5859403 YP_001653883.1 CDS CTLon_0795 NC_010280.1 923195 923911 R hypothetical protein complement(923195..923911) Chlamydia trachomatis L2b/UCH-1/proctitis 5858952 YP_001653884.1 CDS trxA NC_010280.1 924633 924941 D thioredoxin 924633..924941 Chlamydia trachomatis L2b/UCH-1/proctitis 5859601 YP_001653885.1 CDS CTLon_0797 NC_010280.1 924991 925446 R SpoU family rRNA methylase complement(924991..925446) Chlamydia trachomatis L2b/UCH-1/proctitis 5859681 YP_001653886.1 CDS mip NC_010280.1 925462 926193 R peptidyl-prolyl cis-trans isomerase complement(925462..926193) Chlamydia trachomatis L2b/UCH-1/proctitis 5858950 YP_001653887.1 CDS aspS NC_010280.1 926330 928078 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(926330..928078) Chlamydia trachomatis L2b/UCH-1/proctitis 5859545 YP_001653888.1 CDS hisS NC_010280.1 928059 929345 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(928059..929345) Chlamydia trachomatis L2b/UCH-1/proctitis 5858847 YP_001653889.1 CDS uhpC NC_010280.1 929781 931151 D putative sugar phosphate permease 929781..931151 Chlamydia trachomatis L2b/UCH-1/proctitis 5859663 YP_001653890.1 CDS dnaE NC_010280.1 931165 934878 D catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 931165..934878 Chlamydia trachomatis L2b/UCH-1/proctitis 5859512 YP_001653891.1 CDS CTLon_0803 NC_010280.1 935107 935976 R hypothetical protein complement(935107..935976) Chlamydia trachomatis L2b/UCH-1/proctitis 5859394 YP_001653892.1 CDS CTLon_0804 NC_010280.1 936128 937084 D note the tetratricopeptide repeat motifs; hypothetical protein 936128..937084 Chlamydia trachomatis L2b/UCH-1/proctitis 5858949 YP_001653893.1 CDS CTLon_0805 NC_010280.1 937109 937693 D hypothetical protein 937109..937693 Chlamydia trachomatis L2b/UCH-1/proctitis 5858947 YP_001653894.1 CDS rsbW NC_010280.1 937680 938120 D sigma regulatory factor-histidine kinase 937680..938120 Chlamydia trachomatis L2b/UCH-1/proctitis 5858946 YP_001653895.1 CDS CTLon_0807 NC_010280.1 938127 938552 R hypothetical protein complement(938127..938552) Chlamydia trachomatis L2b/UCH-1/proctitis 5859673 YP_001653896.1 CDS dacC NC_010280.1 938660 939973 D pseudo in SeroD intact in Sero A; D-alanyl-D-alanine carboxypeptidase 938660..939973 Chlamydia trachomatis L2b/UCH-1/proctitis 5858945 YP_001653897.1 CDS CTLon_0809 NC_010280.1 940106 940513 D hypothetical protein 940106..940513 Chlamydia trachomatis L2b/UCH-1/proctitis 5859368 YP_001653898.1 CDS CTLon_0810 NC_010280.1 940510 941616 D putative methyltransferase 940510..941616 Chlamydia trachomatis L2b/UCH-1/proctitis 5858944 YP_001653899.1 CDS brnQ NC_010280.1 941766 943001 D branched-chain amino acid transport system carrier protein 941766..943001 Chlamydia trachomatis L2b/UCH-1/proctitis 5858943 YP_001653900.1 CDS CTLon_0812 NC_010280.1 943175 946774 D helicase 943175..946774 Chlamydia trachomatis L2b/UCH-1/proctitis 5859609 YP_001653901.1 CDS CTLon_0813 NC_010280.1 946953 947432 D hypothetical protein 946953..947432 Chlamydia trachomatis L2b/UCH-1/proctitis 5858941 YP_001653902.1 CDS lpdA NC_010280.1 947641 949038 D E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 947641..949038 Chlamydia trachomatis L2b/UCH-1/proctitis 5858940 YP_001653903.1 CDS lipA NC_010280.1 949035 949970 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 949035..949970 Chlamydia trachomatis L2b/UCH-1/proctitis 5859623 YP_001653904.1 CDS sctJ NC_010280.1 950074 951051 D type III secretion system protein, membrane component 950074..951051 Chlamydia trachomatis L2b/UCH-1/proctitis 5859634 YP_001653905.1 CDS CTLon_0817 NC_010280.1 951052 951888 D hypothetical protein 951052..951888 Chlamydia trachomatis L2b/UCH-1/proctitis 5859668 YP_001653906.1 CDS sctL NC_010280.1 952164 952835 D type III secretion system protein 952164..952835 Chlamydia trachomatis L2b/UCH-1/proctitis 5858938 YP_001653907.1 CDS sctR NC_010280.1 952848 953768 D type III secretion system protein 952848..953768 Chlamydia trachomatis L2b/UCH-1/proctitis 5859275 YP_001653908.1 CDS sctS NC_010280.1 953780 954064 D type III secretion system, membrane protein 953780..954064 Chlamydia trachomatis L2b/UCH-1/proctitis 5859652 YP_001653909.1 CDS sctT NC_010280.1 954071 954940 D type III secretion system, membrane protein 954071..954940 Chlamydia trachomatis L2b/UCH-1/proctitis 5859624 YP_001653910.1 CDS CTLon_0822 NC_010280.1 955019 955462 R hypothetical protein complement(955019..955462) Chlamydia trachomatis L2b/UCH-1/proctitis 5859659 YP_001653911.1 CDS CTLon_0823 NC_010280.1 955552 956544 R hypothetical protein complement(955552..956544) Chlamydia trachomatis L2b/UCH-1/proctitis 5858937 YP_001653912.1 CDS CTLon_0824 NC_010280.1 956550 957074 R hypothetical protein complement(956550..957074) Chlamydia trachomatis L2b/UCH-1/proctitis 5858936 YP_001653913.1 CDS CTLon_0825 NC_010280.1 957059 957514 R hypothetical protein complement(957059..957514) Chlamydia trachomatis L2b/UCH-1/proctitis 5858935 YP_001653914.1 CDS gspG NC_010280.1 957498 957827 R general secretion pathway protein G complement(957498..957827) Chlamydia trachomatis L2b/UCH-1/proctitis 5858933 YP_001653915.1 CDS gspF NC_010280.1 957890 959065 R general secretion pathway protein F complement(957890..959065) Chlamydia trachomatis L2b/UCH-1/proctitis 5859696 YP_001653916.1 CDS gspE NC_010280.1 959077 960582 R general secretion pathway protein E complement(959077..960582) Chlamydia trachomatis L2b/UCH-1/proctitis 5859692 YP_001653917.1 CDS gspD NC_010280.1 960566 962848 R general secretion pathway protein D complement(960566..962848) Chlamydia trachomatis L2b/UCH-1/proctitis 5859687 YP_001653918.1 CDS CTLon_0830 NC_010280.1 962849 964078 R hypothetical protein complement(962849..964078) Chlamydia trachomatis L2b/UCH-1/proctitis 5859689 YP_001653919.1 CDS pepP NC_010280.1 964207 965277 R proline dipeptidase complement(964207..965277) Chlamydia trachomatis L2b/UCH-1/proctitis 5858932 YP_001653920.1 CDS mutL NC_010280.1 965288 967018 R This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein complement(965288..967018) Chlamydia trachomatis L2b/UCH-1/proctitis 5859492 YP_001653921.1 CDS scc2 NC_010280.1 967298 967996 D type III secretion chaperone (low calcium response protein H) 967298..967996 Chlamydia trachomatis L2b/UCH-1/proctitis 5859513 YP_001653922.1 CDS CTLon_0834 NC_010280.1 968013 968372 D hypothetical protein 968013..968372 Chlamydia trachomatis L2b/UCH-1/proctitis 5858888 YP_001653923.1 CDS copB NC_010280.1 968409 969872 D putative type III secretion system membrane protein 968409..969872 Chlamydia trachomatis L2b/UCH-1/proctitis 5858931 YP_001653924.1 CDS copD NC_010280.1 969903 971222 D putative type III secretion system protein 969903..971222 Chlamydia trachomatis L2b/UCH-1/proctitis 5859330 YP_001653925.1 CDS CTLon_0837 NC_010280.1 971300 972283 R putative integral membrane protein complement(971300..972283) Chlamydia trachomatis L2b/UCH-1/proctitis 5859335 YP_001653926.1 CDS thrS NC_010280.1 972588 974495 D catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 972588..974495 Chlamydia trachomatis L2b/UCH-1/proctitis 5858930 YP_001653927.1 CDS minD NC_010280.1 974947 975714 D ParA family chromosome partitioning ATPase 974947..975714 Chlamydia trachomatis L2b/UCH-1/proctitis 5858902 YP_001653928.1 CDS gp6D NC_010280.1 975719 976510 D virulence plasmid protein pGP6-D-related protein 975719..976510 Chlamydia trachomatis L2b/UCH-1/proctitis 5859544 YP_001653929.1 CDS CTLon_0841 NC_010280.1 976476 977027 D hypothetical protein 976476..977027 Chlamydia trachomatis L2b/UCH-1/proctitis 5859631 YP_001653930.1 CDS trpS NC_010280.1 977206 978246 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 977206..978246 Chlamydia trachomatis L2b/UCH-1/proctitis 5858929 YP_001653931.1 CDS uvrB NC_010280.1 978271 980277 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 978271..980277 Chlamydia trachomatis L2b/UCH-1/proctitis 5859644 YP_001653932.1 CDS eno NC_010280.1 980439 981713 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 980439..981713 Chlamydia trachomatis L2b/UCH-1/proctitis 5859706 YP_001653933.1 CDS rbsU NC_010280.1 981840 983792 D sigma regulatory family protein-PP2C phosphatase 981840..983792 Chlamydia trachomatis L2b/UCH-1/proctitis 5859434 YP_001653934.1 CDS CTLon_0846 NC_010280.1 983917 985725 D hypothetical protein 983917..985725 Chlamydia trachomatis L2b/UCH-1/proctitis 5858939 YP_001653935.1 CDS CTLon_0847 NC_010280.1 985740 988604 R hypothetical protein complement(985740..988604) Chlamydia trachomatis L2b/UCH-1/proctitis 5858928 YP_001653936.1 CDS sdhB NC_010280.1 988701 989399 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit complement(988701..989399) Chlamydia trachomatis L2b/UCH-1/proctitis 5858926 YP_001653937.1 CDS sdhA NC_010280.1 989478 991358 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit complement(989478..991358) Chlamydia trachomatis L2b/UCH-1/proctitis 5859612 YP_001653938.1 CDS CTLon_0851 NC_010280.1 992363 993154 R putative hydrolase complement(992363..993154) Chlamydia trachomatis L2b/UCH-1/proctitis 5858925 YP_001653939.1 CDS dsdD NC_010280.1 993239 995317 R thiol:disulfide interchange protein complement(993239..995317) Chlamydia trachomatis L2b/UCH-1/proctitis 5858922 YP_001653940.1 CDS exbB NC_010280.1 995470 996168 D macromolecule transporter 995470..996168 Chlamydia trachomatis L2b/UCH-1/proctitis 5859419 YP_001653941.1 CDS CTLon_0854 NC_010280.1 996165 996572 D macromolecule transport protein 996165..996572 Chlamydia trachomatis L2b/UCH-1/proctitis 5859437 YP_001653942.1 CDS CTLon_0855 NC_010280.1 996575 997282 D histone H1-I 996575..997282 Chlamydia trachomatis L2b/UCH-1/proctitis 5858921 YP_001653943.1 CDS tolB NC_010280.1 997282 998577 D forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 997282..998577 Chlamydia trachomatis L2b/UCH-1/proctitis 5858920 YP_001653944.1 CDS pal NC_010280.1 998574 999140 D peptidoglycan-associated lipoprotein 998574..999140 Chlamydia trachomatis L2b/UCH-1/proctitis 5859669 YP_001653945.1 CDS CTLon_0858 NC_010280.1 999130 999732 D putative soluble transglycosylase 999130..999732 Chlamydia trachomatis L2b/UCH-1/proctitis 5858924 YP_001653946.1 CDS CTLon_0859 NC_010280.1 999803 1000195 D hypothetical protein 999803..1000195 Chlamydia trachomatis L2b/UCH-1/proctitis 5858919 YP_001653947.1 CDS ahpC NC_010280.1 1000192 1000779 R thioredoxin peroxidase complement(1000192..1000779) Chlamydia trachomatis L2b/UCH-1/proctitis 5858917 YP_001653948.1 CDS groEL2 NC_010280.1 1000987 1002588 R 60 kDa chaperonin GroEL2 complement(1000987..1002588) Chlamydia trachomatis L2b/UCH-1/proctitis 5859635 YP_001653949.1 CDS CTLon_0862 NC_010280.1 1002668 1003894 R hypothetical protein complement(1002668..1003894) Chlamydia trachomatis L2b/UCH-1/proctitis 5859675 YP_001653950.1 CDS CTLon_0863 NC_010280.1 1004091 1004720 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 1004091..1004720 Chlamydia trachomatis L2b/UCH-1/proctitis 5858912 YP_001653951.1 CDS CTLon_0864 NC_010280.1 1004694 1004933 R hypothetical protein complement(1004694..1004933) Chlamydia trachomatis L2b/UCH-1/proctitis 5858909 YP_001653952.1 CDS ung NC_010280.1 1004918 1005607 R Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase complement(1004918..1005607) Chlamydia trachomatis L2b/UCH-1/proctitis 5858907 YP_001653953.1 CDS uvrD NC_010280.1 1005688 1007592 D DNA helicase 1005688..1007592 Chlamydia trachomatis L2b/UCH-1/proctitis 5859428 YP_001653954.1 CDS rpoN NC_010280.1 1007596 1008906 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 1007596..1008906 Chlamydia trachomatis L2b/UCH-1/proctitis 5859183 YP_001653955.1 CDS CTLon_0868 NC_010280.1 1009014 1009709 R hypothetical protein complement(1009014..1009709) Chlamydia trachomatis L2b/UCH-1/proctitis 5859064 YP_001653956.1 CDS CTLon_0869 NC_010280.1 1009706 1010437 R hypothetical protein complement(1009706..1010437) Chlamydia trachomatis L2b/UCH-1/proctitis 5858906 YP_001653957.1 CDS folA NC_010280.1 1010409 1010888 R dihydrofolate reductase complement(1010409..1010888) Chlamydia trachomatis L2b/UCH-1/proctitis 5858905 YP_001653958.1 CDS folP NC_010280.1 1010885 1012237 R 2-amino-4-hydroxy-6-hydroxymethyldihydropteridi ne pyrophosphokinase complement(1010885..1012237) Chlamydia trachomatis L2b/UCH-1/proctitis 5859506 YP_001653959.1 CDS folX NC_010280.1 1012234 1012608 R dihydroneopterin aldolase complement(1012234..1012608) Chlamydia trachomatis L2b/UCH-1/proctitis 5859522 YP_001653960.1 CDS rpoD NC_010280.1 1012627 1014342 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; RNA polymerase sigma factor complement(1012627..1014342) Chlamydia trachomatis L2b/UCH-1/proctitis 5859520 YP_001653961.1 CDS CTLon_0874 NC_010280.1 1014491 1015780 R putative integral membrane protein complement(1014491..1015780) Chlamydia trachomatis L2b/UCH-1/proctitis 5859125 YP_001653962.1 CDS rpsT NC_010280.1 1016229 1016525 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1016229..1016525 Chlamydia trachomatis L2b/UCH-1/proctitis 5858904 YP_001653963.1 CDS CTLon_0876 NC_010280.1 1016758 1017558 D hypothetical protein 1016758..1017558 Chlamydia trachomatis L2b/UCH-1/proctitis 5859589 YP_001653964.1 CDS CTLon_0877 NC_010280.1 1017615 1020242 R hypothetical protein complement(1017615..1020242) Chlamydia trachomatis L2b/UCH-1/proctitis 5858903 YP_001653965.1 CDS CTLon_0878 NC_010280.1 1020357 1022873 D hypothetical protein 1020357..1022873 Chlamydia trachomatis L2b/UCH-1/proctitis 5858901 YP_001653966.1 CDS CTLon_0879 NC_010280.1 1022937 1025435 R hypothetical protein complement(1022937..1025435) Chlamydia trachomatis L2b/UCH-1/proctitis 5858900 YP_001653967.1 CDS CTLon_0880 NC_010280.1 1025663 1027618 R member of the CHLPN 76 kD protein family of proteins; hypothetical protein complement(1025663..1027618) Chlamydia trachomatis L2b/UCH-1/proctitis 5858898 YP_001653968.1 CDS CTLon_0881 NC_010280.1 1027725 1029026 R member of the CHLPN 76 kD protein family of proteins; hypothetical protein complement(1027725..1029026) Chlamydia trachomatis L2b/UCH-1/proctitis 5858896 YP_001653969.1 CDS mviN NC_010280.1 1029270 1030853 R putative virulence protein complement(1029270..1030853) Chlamydia trachomatis L2b/UCH-1/proctitis 5858895 YP_001653970.1 CDS nfo NC_010280.1 1031053 1031919 D Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 1031053..1031919 Chlamydia trachomatis L2b/UCH-1/proctitis 5859510 YP_001653971.1 CDS rpsD NC_010280.1 1032015 1032644 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(1032015..1032644) Chlamydia trachomatis L2b/UCH-1/proctitis 5859503 YP_001653972.1 CDS CTLon_0885 NC_010280.1 1033028 1034011 D hypothetical protein 1033028..1034011 Chlamydia trachomatis L2b/UCH-1/proctitis 5859627 YP_001653973.1 CDS ispA NC_010280.1 1034084 1034959 R dimethylallyltransferase complement(1034084..1034959) Chlamydia trachomatis L2b/UCH-1/proctitis 5858894 YP_001653974.1 CDS glmU NC_010280.1 1035015 1035632 R glucosamine-1-phosphate acetyltransferase complement(1035015..1035632) Chlamydia trachomatis L2b/UCH-1/proctitis 5859718 YP_001653975.1 CDS CTLon_0888 NC_010280.1 1035685 1036368 R transcriptional regulatory protein complement(1035685..1036368) Chlamydia trachomatis L2b/UCH-1/proctitis 5859570 YP_001653976.1 CDS CTLon_0889 NC_010280.1 1036548 1036802 D hypothetical protein 1036548..1036802 Chlamydia trachomatis L2b/UCH-1/proctitis 5858893 YP_001653977.1 CDS CTLon_0890 NC_010280.1 1036983 1038572 R hypothetical protein complement(1036983..1038572) Chlamydia trachomatis L2b/UCH-1/proctitis 5859235 CTLon_0108h tRNA tRNA-Ala NC_010280.1 5166 5238 R tRNA-Ala complement(5166..5238) Chlamydia trachomatis L2b/UCH-1/proctitis 5859660 CTLon_0108j tRNA tRNA-Arg NC_010280.1 32410 32482 D tRNA-Arg 32410..32482 Chlamydia trachomatis L2b/UCH-1/proctitis 5859690 CTLon_0108an tRNA tRNA-Thr NC_010280.1 53147 53219 D tRNA-Thr 53147..53219 Chlamydia trachomatis L2b/UCH-1/proctitis 5859457 CTLon_0108z tRNA tRNA-Lys NC_010280.1 55013 55085 R tRNA-Lys complement(55013..55085) Chlamydia trachomatis L2b/UCH-1/proctitis 5859456 CTLon_0108q tRNA tRNA-Glu NC_010280.1 55102 55176 R tRNA-Glu complement(55102..55176) Chlamydia trachomatis L2b/UCH-1/proctitis 5859647 CTLon_0108r tRNA tRNA-Gly NC_010280.1 58342 58412 R tRNA-Gly complement(58342..58412) Chlamydia trachomatis L2b/UCH-1/proctitis 5859316 CTLon_0108s tRNA tRNA-Gly NC_010280.1 94307 94378 R tRNA-Gly complement(94307..94378) Chlamydia trachomatis L2b/UCH-1/proctitis 5859519 CTLon_0108a tRNA tRNA-His NC_010280.1 133374 133447 R tRNA-His complement(133374..133447) Chlamydia trachomatis L2b/UCH-1/proctitis 5859525 CTLon_0108o tRNA tRNA-Cys NC_010280.1 167784 167854 R tRNA-Cys complement(167784..167854) Chlamydia trachomatis L2b/UCH-1/proctitis 5859654 CTLon_0108p tRNA tRNA-Gln NC_010280.1 216897 216968 D tRNA-Gln 216897..216968 Chlamydia trachomatis L2b/UCH-1/proctitis 5859562 CTLon_0108as tRNA tRNA-Val NC_010280.1 259310 259383 R tRNA-Val complement(259310..259383) Chlamydia trachomatis L2b/UCH-1/proctitis 5859483 CTLon_0108aj tRNA tRNA-Ser NC_010280.1 264120 264204 D tRNA-Ser 264120..264204 Chlamydia trachomatis L2b/UCH-1/proctitis 5859744 CTLon_0108u tRNA tRNA-Leu NC_010280.1 297895 297976 D tRNA-Leu 297895..297976 Chlamydia trachomatis L2b/UCH-1/proctitis 5859288 CTLon_0108m tRNA tRNA-Asn NC_010280.1 364939 365010 R tRNA-Asn complement(364939..365010) Chlamydia trachomatis L2b/UCH-1/proctitis 5859255 CTLon_0108ah tRNA tRNA-Pro NC_010280.1 391297 391371 R tRNA-Pro complement(391297..391371) Chlamydia trachomatis L2b/UCH-1/proctitis 5859465 CTLon_0108ao tRNA tRNA-Thr NC_010280.1 481126 481198 D tRNA-Thr 481126..481198 Chlamydia trachomatis L2b/UCH-1/proctitis 5859189 CTLon_0108ar tRNA tRNA-Tyr NC_010280.1 481209 481291 D tRNA-Tyr 481209..481291 Chlamydia trachomatis L2b/UCH-1/proctitis 5859633 CTLon_0108t tRNA tRNA-Ile NC_010280.1 520817 520890 R tRNA-Ile complement(520817..520890) Chlamydia trachomatis L2b/UCH-1/proctitis 5859152 CTLon_0108i tRNA tRNA-Ala NC_010280.1 520896 520968 R tRNA-Ala complement(520896..520968) Chlamydia trachomatis L2b/UCH-1/proctitis 5859572 CTLon_0108ab tRNA tRNA-Met NC_010280.1 552760 552833 R tRNA-Met complement(552760..552833) Chlamydia trachomatis L2b/UCH-1/proctitis 5859709 CTLon_0108ac tRNA tRNA-Met NC_010280.1 552852 552924 R tRNA-Met complement(552852..552924) Chlamydia trachomatis L2b/UCH-1/proctitis 5859758 CTLon_0108n tRNA tRNA-Asp NC_010280.1 568767 568840 R tRNA-Asp complement(568767..568840) Chlamydia trachomatis L2b/UCH-1/proctitis 5859129 CTLon_0108at tRNA tRNA-Val NC_010280.1 568848 568920 R tRNA-Val complement(568848..568920) Chlamydia trachomatis L2b/UCH-1/proctitis 5859354 CTLon_0108aq tRNA tRNA-Trp NC_010280.1 680376 680448 R tRNA-Trp complement(680376..680448) Chlamydia trachomatis L2b/UCH-1/proctitis 5859625 CTLon_0108ap tRNA tRNA-Thr NC_010280.1 681719 681790 R tRNA-Thr complement(681719..681790) Chlamydia trachomatis L2b/UCH-1/proctitis 5859072 CTLon_0108aa tRNA tRNA-Met NC_010280.1 687012 687084 D tRNA-Met 687012..687084 Chlamydia trachomatis L2b/UCH-1/proctitis 5859057 CTLon_0108ak tRNA tRNA-Ser NC_010280.1 727859 727945 D tRNA-Ser 727859..727945 Chlamydia trachomatis L2b/UCH-1/proctitis 5859041 CTLon_0108al tRNA tRNA-Ser NC_010280.1 803873 803959 R tRNA-Ser complement(803873..803959) Chlamydia trachomatis L2b/UCH-1/proctitis 5859753 CTLon_0108ad tRNA tRNA-Phe NC_010280.1 808612 808684 R tRNA-Phe complement(808612..808684) Chlamydia trachomatis L2b/UCH-1/proctitis 5859228 CTLon_0108v tRNA tRNA-Leu NC_010280.1 859677 859759 D tRNA-Leu 859677..859759 Chlamydia trachomatis L2b/UCH-1/proctitis 5858981 CTLon_0108k tRNA tRNA-Arg NC_010280.1 862476 862549 D tRNA-Arg 862476..862549 Chlamydia trachomatis L2b/UCH-1/proctitis 5858845 CTLon_0108x tRNA tRNA-Leu NC_010280.1 864603 864684 R tRNA-Leu complement(864603..864684) Chlamydia trachomatis L2b/UCH-1/proctitis 5858977 CTLon_0108am tRNA tRNA-Ser NC_010280.1 893522 893610 R tRNA-Ser complement(893522..893610) Chlamydia trachomatis L2b/UCH-1/proctitis 5859742 CTLon_0108y tRNA tRNA-Leu NC_010280.1 900613 900695 R tRNA-Leu complement(900613..900695) Chlamydia trachomatis L2b/UCH-1/proctitis 5858956 CTLon_0108w tRNA tRNA-Leu NC_010280.1 924376 924459 D tRNA-Leu 924376..924459 Chlamydia trachomatis L2b/UCH-1/proctitis 5858951 CTLon_0108l tRNA tRNA-Arg NC_010280.1 1000804 1000876 R tRNA-Arg complement(1000804..1000876) Chlamydia trachomatis L2b/UCH-1/proctitis 5858869 CTLon_0108ag tRNA tRNA-Pro NC_010280.1 1036902 1036975 D tRNA-Pro 1036902..1036975 Chlamydia trachomatis L2b/UCH-1/proctitis 5858892 CTLon_0108b rRNA 16S_rRNA NC_010280.1 133979 135528 D 16S ribosomal RNA 133979..135528 Chlamydia trachomatis L2b/UCH-1/proctitis 5858976 CTLon_0108c rRNA 23S_rRNA NC_010280.1 135844 138711 D 23S ribosomal RNA 135844..138711 Chlamydia trachomatis L2b/UCH-1/proctitis 5858890 CTLon_0108d rRNA 5S_rRNA NC_010280.1 138832 138948 D 5S ribosomal RNA 138832..138948 Chlamydia trachomatis L2b/UCH-1/proctitis 5858887 CTLon_0108e rRNA 16S_rRNA NC_010280.1 156023 157572 D 16S ribosomal RNA 156023..157572 Chlamydia trachomatis L2b/UCH-1/proctitis 5858868 CTLon_0108f rRNA 23S_rRNA NC_010280.1 157888 160755 D 23S ribosomal RNA 157888..160755 Chlamydia trachomatis L2b/UCH-1/proctitis 5858889 CTLon_0108g rRNA 5S_rRNA NC_010280.1 160876 160992 D 5S ribosomal RNA 160876..160992 Chlamydia trachomatis L2b/UCH-1/proctitis 5858886