-- dump date 20140619_040429 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type NP_224214.1 15617930 895144 complement(1..282) 1 NC_000922.1 hypothetical protein 282 895144 CPn0001 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224214.1 1 R 115713 CDS NP_224215.1 15617931 895049 573..878 1 NC_000922.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 878 gatC 895049 gatC Chlamydophila pneumoniae CWL029 aspartyl/glutamyl-tRNA amidotransferase subunit C NP_224215.1 573 D 115713 CDS NP_224216.1 15617932 894833 895..2373 1 NC_000922.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 2373 gatA 894833 gatA Chlamydophila pneumoniae CWL029 aspartyl/glutamyl-tRNA amidotransferase subunit A NP_224216.1 895 D 115713 CDS NP_224217.1 15617933 895027 2370..3836 1 NC_000922.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 3836 gatB 895027 gatB Chlamydophila pneumoniae CWL029 aspartyl/glutamyl-tRNA amidotransferase subunit B NP_224217.1 2370 D 115713 CDS NP_224218.1 15617934 894759 4127..6895 1 NC_000922.1 hypothetical protein 6895 pmp_1 894759 pmp_1 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224218.1 4127 D 115713 CDS NP_224219.1 15617935 895024 complement(7138..7293) 1 NC_000922.1 hypothetical protein 7293 895024 CPn0006 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224219.1 7138 R 115713 CDS NP_224220.1 15617936 894953 7605..10499 1 NC_000922.1 hypothetical protein 10499 894953 CPn0007 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224220.1 7605 D 115713 CDS NP_224221.1 15617937 894966 10975..11688 1 NC_000922.1 hypothetical protein 11688 894966 CPn0008 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224221.1 10975 D 115713 CDS NP_224222.1 15617938 895206 11815..13122 1 NC_000922.1 hypothetical protein 13122 895206 CPn0009 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224222.1 11815 D 115713 CDS NP_224223.1 15617939 894991 13435..14328 1 NC_000922.1 hypothetical protein 14328 894991 CPn0010 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224223.1 13435 D 115713 CDS NP_224226.1 15617942 894938 16644..18215 1 NC_000922.1 hypothetical protein 18215 894938 CPn0012 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224226.1 16644 D 115713 CDS NP_224227.1 15617943 894895 18584..21109 1 NC_000922.1 hypothetical protein 21109 pmp_2 894895 pmp_2 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224227.1 18584 D 115713 CDS NP_224228.1 15617944 894965 complement(30600..32687) 1 NC_000922.1 leader peptide: outer membrane; hypothetical protein 32687 894965 CPn0020 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224228.1 30600 R 115713 CDS NP_224229.1 15617945 895159 complement(32704..34410) 1 NC_000922.1 leader peptide; hypothetical protein 34410 895159 CPn0021 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224229.1 32704 R 115713 CDS NP_224230.1 15617946 895108 complement(34392..34982) 1 NC_000922.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 34982 maf 895108 maf Chlamydophila pneumoniae CWL029 Maf-like protein NP_224230.1 34392 R 115713 CDS NP_224231.1 15617947 895045 complement(35011..36603) 1 NC_000922.1 ABC transporter ATPase 36603 yjjK 895045 yjjK Chlamydophila pneumoniae CWL029 ABC transporter ATPase NP_224231.1 35011 R 115713 CDS NP_224232.1 15617948 895001 complement(36658..37596) 1 NC_000922.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 37596 xerC 895001 xerC Chlamydophila pneumoniae CWL029 site-specific tyrosine recombinase XerC NP_224232.1 36658 R 115713 CDS NP_224233.1 15617949 894854 complement(37681..38604) 1 NC_000922.1 member of metallo-beta-lactamase; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z 38604 atsA 894854 atsA Chlamydophila pneumoniae CWL029 ribonuclease Z NP_224233.1 37681 R 115713 CDS NP_224234.1 15617950 894967 complement(38759..39625) 1 NC_000922.1 hypothetical protein 39625 894967 CPn0026 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224234.1 38759 R 115713 CDS NP_224235.1 15617951 894928 complement(39775..42234) 1 NC_000922.1 Lon ATP-dependent protease 42234 lon 894928 lon Chlamydophila pneumoniae CWL029 Lon ATP-dependent protease NP_224235.1 39775 R 115713 CDS NP_224236.1 15617952 895157 complement(42540..43325) 1 NC_000922.1 hypothetical protein 43325 895157 CPn0028 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224236.1 42540 R 115713 CDS NP_224237.1 15617953 895163 complement(43387..43755) 1 NC_000922.1 hypothetical protein 43755 895163 CPn0029 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224237.1 43387 R 115713 CDS NP_224238.1 15617954 895179 43891..44532 1 NC_000922.1 O-sialoglycoprotein endopeptidase 44532 gcp_1 895179 gcp_1 Chlamydophila pneumoniae CWL029 O-sialoglycoprotein endopeptidase NP_224238.1 43891 D 115713 CDS NP_224239.1 15617955 895005 44711..44887 1 NC_000922.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 44887 rpsU 895005 rpsU Chlamydophila pneumoniae CWL029 30S ribosomal protein S21 NP_224239.1 44711 D 115713 CDS NP_224240.1 15617956 895202 44923..46101 1 NC_000922.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ 46101 dnaJ 895202 dnaJ Chlamydophila pneumoniae CWL029 molecular chaperone DnaJ NP_224240.1 44923 D 115713 CDS NP_224241.1 15617957 895207 46138..48174 1 NC_000922.1 (pyruvate) oxoisovalerate dehydrogenase subunits alpha and beta 48174 pdhA/pdhB 895207 pdhA/pdhB Chlamydophila pneumoniae CWL029 (pyruvate) oxoisovalerate dehydrogenase subunits alpha and beta NP_224241.1 46138 D 115713 CDS NP_224242.1 15617958 894700 complement(48207..49457) 1 NC_000922.1 hypothetical protein 49457 894700 CPn0034 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224242.1 48207 R 115713 CDS NP_224243.1 15617959 895152 complement(49566..51029) 1 NC_000922.1 hypothetical protein 51029 895152 CPn0035 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224243.1 49566 R 115713 CDS NP_224244.1 15617960 895191 51002..51799 1 NC_000922.1 hypothetical protein 51799 895191 CPn0036 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224244.1 51002 D 115713 CDS NP_224245.1 15617961 894828 51792..52118 1 NC_000922.1 PTS system phosphocarrier protein Hpr 52118 ptsH 894828 ptsH Chlamydophila pneumoniae CWL029 PTS system phosphocarrier protein Hpr NP_224245.1 51792 D 115713 CDS NP_224246.1 15617962 895213 52119..53834 1 NC_000922.1 PTS system PEP phosphotransferase 53834 ptsI 895213 ptsI Chlamydophila pneumoniae CWL029 PTS system PEP phosphotransferase NP_224246.1 52119 D 115713 CDS NP_224247.1 15617963 894808 complement(53960..54250) 1 NC_000922.1 hypothetical protein 54250 ybaB 894808 ybaB Chlamydophila pneumoniae CWL029 hypothetical protein NP_224247.1 53960 R 115713 CDS NP_224248.1 15617964 894835 complement(54315..55643) 1 NC_000922.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma/tau 55643 dnaX_1 894835 dnaX_1 Chlamydophila pneumoniae CWL029 DNA polymerase III subunits gamma/tau NP_224248.1 54315 R 115713 CDS NP_224249.1 15617965 894876 55996..57345 1 NC_000922.1 hypothetical protein 57345 894876 CPn0041 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224249.1 55996 D 115713 CDS NP_224250.1 15617966 894882 57403..58185 1 NC_000922.1 hypothetical protein 58185 894882 CPn0042 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224250.1 57403 D 115713 CDS NP_224251.1 15617967 894819 58447..60375 1 NC_000922.1 hypothetical protein 60375 894819 CPn0043 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224251.1 58447 D 115713 CDS NP_224252.1 15617968 894896 60419..60781 1 NC_000922.1 hypothetical protein 60781 894896 CPn0044 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224252.1 60419 D 115713 CDS NP_224255.1 15617971 894956 63455..63655 1 NC_000922.1 hypothetical protein 63655 894956 CPn0047 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224255.1 63455 D 115713 CDS NP_224256.1 15617972 895003 63687..65804 1 NC_000922.1 hypothetical protein 65804 yqfF 895003 yqfF Chlamydophila pneumoniae CWL029 hypothetical protein NP_224256.1 63687 D 115713 CDS NP_224257.1 15617973 895593 complement(65814..66296) 1 NC_000922.1 hypothetical protein 66296 895593 CPn0049 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224257.1 65814 R 115713 CDS NP_224258.1 15617974 894989 complement(66496..66813) 1 NC_000922.1 hypothetical protein 66813 894989 CPn0050 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224258.1 66496 R 115713 CDS NP_224259.1 15617975 894742 66833..67114 1 NC_000922.1 hypothetical protein 67114 894742 CPn0051 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224259.1 66833 D 115713 CDS NP_224260.1 15617976 895060 complement(67301..68005) 1 NC_000922.1 transformation of prophobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 68005 hemC 895060 hemC Chlamydophila pneumoniae CWL029 porphobilinogen deaminase NP_224260.1 67301 R 115713 CDS NP_224261.1 15617977 895591 complement(67983..69344) 1 NC_000922.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 69344 sms 895591 sms Chlamydophila pneumoniae CWL029 DNA repair protein RadA NP_224261.1 67983 R 115713 CDS NP_224262.1 15617978 895023 complement(69310..70023) 1 NC_000922.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 70023 rnc 895023 rnc Chlamydophila pneumoniae CWL029 ribonuclease III NP_224262.1 69310 R 115713 CDS NP_224263.1 15617979 894988 70129..70593 1 NC_000922.1 hypothetical protein 70593 894988 CPn0055 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224263.1 70129 D 115713 CDS NP_224264.1 15617980 894757 70953..72749 1 NC_000922.1 phosphomannomutase 72749 mrsA 894757 mrsA Chlamydophila pneumoniae CWL029 phosphomannomutase NP_224264.1 70953 D 115713 CDS NP_224265.1 15617981 894772 72934..73557 1 NC_000922.1 superoxide dismutase 73557 sodM 894772 sodM Chlamydophila pneumoniae CWL029 superoxide dismutase NP_224265.1 72934 D 115713 CDS NP_224266.1 15617982 895132 73639..74565 1 NC_000922.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 74565 accD 895132 accD Chlamydophila pneumoniae CWL029 acetyl-CoA carboxylase subunit beta NP_224266.1 73639 D 115713 CDS NP_224267.1 15617983 894712 74616..75053 1 NC_000922.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 75053 dut 894712 dut Chlamydophila pneumoniae CWL029 deoxyuridine 5'-triphosphate nucleotidohydrolase NP_224267.1 74616 D 115713 CDS NP_224268.1 15617984 894746 75055..75531 1 NC_000922.1 PTS system transporter subunit IIA 75531 ptsN_1 894746 ptsN_1 Chlamydophila pneumoniae CWL029 PTS system transporter subunit IIA NP_224268.1 75055 D 115713 CDS NP_224269.1 15617985 894781 75534..76211 1 NC_000922.1 fused PTS system transporter subunit IIA/HTH DNA-binding domain-containing protein 76211 ptsN_2 894781 ptsN_2 Chlamydophila pneumoniae CWL029 fused PTS system transporter subunit IIA/HTH DNA-binding domain-containing protein NP_224269.1 75534 D 115713 CDS NP_224270.1 15617986 895032 76308..77693 1 NC_000922.1 hypothetical protein 77693 895032 CPn0062 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224270.1 76308 D 115713 CDS NP_224271.1 15617987 894929 78112..78270 1 NC_000922.1 hypothetical protein 78270 894929 CPn0063 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224271.1 78112 D 115713 CDS NP_224272.1 15617988 895021 78346..78579 1 NC_000922.1 hypothetical protein 78579 895021 CPn0064 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224272.1 78346 D 115713 CDS NP_224273.1 15617989 894941 78924..80654 1 NC_000922.1 hypothetical protein 80654 894941 CPn0065 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224273.1 78924 D 115713 CDS NP_224274.1 15617990 894745 80925..82658 1 NC_000922.1 hypothetical protein 82658 894745 CPn0066 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224274.1 80925 D 115713 CDS NP_224275.1 15617991 895581 82953..84056 1 NC_000922.1 hypothetical protein 84056 895581 CPn0067 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224275.1 82953 D 115713 CDS NP_224276.1 15617992 894821 complement(84328..84903) 1 NC_000922.1 hypothetical protein 84903 894821 CPn0068 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224276.1 84328 R 115713 CDS NP_224277.1 15617993 895590 85236..87089 1 NC_000922.1 hypothetical protein 87089 895590 CPn0069 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224277.1 85236 D 115713 CDS NP_224279.1 15617995 895569 complement(87596..88045) 1 NC_000922.1 hypothetical protein 88045 895569 CPn0071 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224279.1 87596 R 115713 CDS NP_224280.1 15617996 895552 complement(88054..89061) 1 NC_000922.1 hypothetical protein 89061 895552 CPn0072 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224280.1 88054 R 115713 CDS NP_224281.1 15617997 894930 89356..89577 1 NC_000922.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 89577 infA 894930 infA Chlamydophila pneumoniae CWL029 translation initiation factor IF-1 NP_224281.1 89356 D 115713 CDS NP_224282.1 15617998 894749 89774..90958 1 NC_000922.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 90958 tuf 894749 tuf Chlamydophila pneumoniae CWL029 elongation factor Tu NP_224282.1 89774 D 115713 CDS NP_224283.1 15617999 894699 91102..91353 1 NC_000922.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 91353 secE 894699 secE Chlamydophila pneumoniae CWL029 preprotein translocase subunit SecE NP_224283.1 91102 D 115713 CDS NP_224284.1 15618000 894692 91358..91906 1 NC_000922.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 91906 nusG 894692 nusG Chlamydophila pneumoniae CWL029 transcription antitermination protein NusG NP_224284.1 91358 D 115713 CDS NP_224285.1 15618001 895525 92013..92438 1 NC_000922.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 92438 rplK 895525 rplK Chlamydophila pneumoniae CWL029 50S ribosomal protein L11 NP_224285.1 92013 D 115713 CDS NP_224286.1 15618002 894779 92465..93163 1 NC_000922.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 93163 rplA 894779 rplA Chlamydophila pneumoniae CWL029 50S ribosomal protein L1 NP_224286.1 92465 D 115713 CDS NP_224287.1 15618003 894706 93179..93691 1 NC_000922.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 93691 rplJ 894706 rplJ Chlamydophila pneumoniae CWL029 50S ribosomal protein L10 NP_224287.1 93179 D 115713 CDS NP_224288.1 15618004 895576 93735..94124 1 NC_000922.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 94124 rplL 895576 rplL Chlamydophila pneumoniae CWL029 50S ribosomal protein L7/L12 NP_224288.1 93735 D 115713 CDS NP_224289.1 15618005 894794 94261..98019 1 NC_000922.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 98019 rpoB 894794 rpoB Chlamydophila pneumoniae CWL029 DNA-directed RNA polymerase subunit beta NP_224289.1 94261 D 115713 CDS NP_224290.1 15618006 894980 98043..102224 1 NC_000922.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 102224 rpoC 894980 rpoC Chlamydophila pneumoniae CWL029 DNA-directed RNA polymerase subunit beta' NP_224290.1 98043 D 115713 CDS NP_224291.1 15618007 895561 102332..103315 1 NC_000922.1 Maintains the balance of metabolites in the pentose-phosphate pathway; transaldolase B 103315 tal 895561 tal Chlamydophila pneumoniae CWL029 transaldolase B NP_224291.1 102332 D 115713 CDS NP_224292.1 15618008 895547 103362..103754 1 NC_000922.1 ferredoxin 103754 895547 CPn0084 Chlamydophila pneumoniae CWL029 ferredoxin NP_224292.1 103362 D 115713 CDS NP_224293.1 15618009 894691 complement(103763..104506) 1 NC_000922.1 hypothetical protein 104506 894691 CPn0085 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224293.1 103763 R 115713 CDS NP_224294.1 15618010 894752 104904..105530 1 NC_000922.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the E subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit E 105530 atpE 894752 atpE Chlamydophila pneumoniae CWL029 V-type ATP synthase subunit E NP_224294.1 104904 D 115713 CDS NP_224295.1 15618011 894862 105579..106379 1 NC_000922.1 hypothetical protein 106379 894862 CPn0087 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224295.1 105579 D 115713 CDS NP_224296.1 15618012 895697 106373..108148 1 NC_000922.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit A 108148 atpA 895697 atpA Chlamydophila pneumoniae CWL029 V-type ATP synthase subunit A NP_224296.1 106373 D 115713 CDS NP_224297.1 15618013 895698 108153..109469 1 NC_000922.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the B subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit B 109469 atpB 895698 atpB Chlamydophila pneumoniae CWL029 V-type ATP synthase subunit B NP_224297.1 108153 D 115713 CDS NP_224298.1 15618014 895695 109454..110083 1 NC_000922.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the D subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit D 110083 atpD 895695 atpD Chlamydophila pneumoniae CWL029 V-type ATP synthase subunit D NP_224298.1 109454 D 115713 CDS NP_224299.1 15618015 895696 110074..112056 1 NC_000922.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I is part of the membrane proton channel.; V-type ATP synthase subunit I 112056 atpI 895696 atpI Chlamydophila pneumoniae CWL029 V-type ATP synthase subunit I NP_224299.1 110074 D 115713 CDS NP_224300.1 15618016 895702 112151..112576 1 NC_000922.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits; V-type ATP synthase subunit K 112576 atpK 895702 atpK Chlamydophila pneumoniae CWL029 V-type ATP synthase subunit K NP_224300.1 112151 D 115713 CDS NP_224301.1 15618017 895701 112509..113018 1 NC_000922.1 hypothetical protein 113018 895701 CPn0093 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224301.1 112509 D 115713 CDS NP_224302.1 15618018 895699 113152..115974 1 NC_000922.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 115974 valS 895699 valS Chlamydophila pneumoniae CWL029 valyl-tRNA synthetase NP_224302.1 113152 D 115713 CDS NP_224303.2 161353778 895704 115995..118793 1 NC_000922.1 PknD; responsible for phosphorylation of proteins on serine and threonine residues; similar to eukaryotic Ser/Thr kinases; in Chlamydia trachomatis itseems to interact with Pkn1, another serine/threonine protein kinase; serine/threonine protein kinase 118793 pknD 895704 pknD Chlamydophila pneumoniae CWL029 serine/threonine protein kinase NP_224303.2 115995 D 115713 CDS NP_224304.1 15618020 895700 complement(118834..124314) 1 NC_000922.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 124314 uvrA 895700 uvrA Chlamydophila pneumoniae CWL029 excinuclease ABC subunit A NP_224304.1 118834 R 115713 CDS NP_224305.1 15618021 895703 124555..126009 1 NC_000922.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 126009 pyk 895703 pyk Chlamydophila pneumoniae CWL029 pyruvate kinase NP_224305.1 124555 D 115713 CDS NP_224306.1 15618022 895705 complement(126088..127491) 1 NC_000922.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 127491 htrB 895705 htrB Chlamydophila pneumoniae CWL029 lipid A biosynthesis lauroyl acyltransferase NP_224306.1 126088 R 115713 CDS YP_008470949.1 532524904 16665121 complement(127544..127843) 1 NC_000922.1 hypothetical protein 127843 16665121 CPn0098a Chlamydophila pneumoniae CWL029 hypothetical protein YP_008470949.1 127544 R 115713 CDS NP_224308.1 15618024 895711 complement(127879..129141) 1 NC_000922.1 hypothetical protein 129141 895711 CPn0100 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224308.1 127879 R 115713 CDS NP_224309.1 15618025 895709 complement(129138..129932) 1 NC_000922.1 hypothetical protein 129932 ybbP 895709 ybbP Chlamydophila pneumoniae CWL029 hypothetical protein NP_224309.1 129138 R 115713 CDS NP_224310.1 15618026 895707 130123..131469 1 NC_000922.1 cytochrome oxidase subunit I 131469 cydA 895707 cydA Chlamydophila pneumoniae CWL029 cytochrome oxidase subunit I NP_224310.1 130123 D 115713 CDS NP_224311.1 15618027 895706 131480..132514 1 NC_000922.1 cytochrome oxidase subunit II 132514 cydB 895706 cydB Chlamydophila pneumoniae CWL029 cytochrome oxidase subunit II NP_224311.1 131480 D 115713 CDS NP_224312.1 15618028 895710 complement(132673..133875) 1 NC_000922.1 hypothetical protein 133875 895710 CPn0104 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224312.1 132673 R 115713 CDS NP_224313.1 15618029 894765 complement(134026..134847) 1 NC_000922.1 hypothetical protein 134847 894765 CPn0105 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224313.1 134026 R 115713 CDS NP_224314.1 15618030 894755 135091..136377 1 NC_000922.1 ATPase 136377 phoH 894755 phoH Chlamydophila pneumoniae CWL029 ATPase NP_224314.1 135091 D 115713 CDS NP_224315.1 15618031 895573 complement(136389..137162) 1 NC_000922.1 hypothetical protein 137162 895573 CPn0107 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224315.1 136389 R 115713 CDS NP_224316.1 15618032 894739 complement(137300..137857) 1 NC_000922.1 hypothetical protein 137857 894739 CPn0108 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224316.1 137300 R 115713 CDS NP_224317.1 15618033 894633 138655..141786 1 NC_000922.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase 141786 ileS 894633 ileS Chlamydophila pneumoniae CWL029 isoleucyl-tRNA synthetase NP_224317.1 138655 D 115713 CDS NP_224318.1 15618034 895567 complement(141824..143734) 1 NC_000922.1 signal peptidase I 143734 lepB 895567 lepB Chlamydophila pneumoniae CWL029 signal peptidase I NP_224318.1 141824 R 115713 CDS NP_224319.1 15618035 895499 complement(143931..144686) 1 NC_000922.1 hypothetical protein 144686 895499 CPn0111 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224319.1 143931 R 115713 CDS NP_224320.1 15618036 895527 144767..145096 1 NC_000922.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 145096 rpmE2 895527 rpmE2 Chlamydophila pneumoniae CWL029 50S ribosomal protein L31 NP_224320.1 144767 D 115713 CDS NP_224321.1 15618037 895574 145335..146408 1 NC_000922.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 146408 prfA 895574 prfA Chlamydophila pneumoniae CWL029 peptide chain release factor 1 NP_224321.1 145335 D 115713 CDS NP_224322.1 15618038 895047 146398..147264 1 NC_000922.1 HemK; PrmC; transfers a methyl group from S-adenosyl-methionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB possibly stimulating release of completed polypeptide chains; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 147264 hemK 895047 hemK Chlamydophila pneumoniae CWL029 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase NP_224322.1 146398 D 115713 CDS NP_224323.1 15618039 895065 147279..148625 1 NC_000922.1 signal recognition particle GTPase 148625 ffh 895065 ffh Chlamydophila pneumoniae CWL029 signal recognition particle GTPase NP_224323.1 147279 D 115713 CDS NP_224324.1 15618040 895176 148616..148975 1 NC_000922.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 148975 rpsP 895176 rpsP Chlamydophila pneumoniae CWL029 30S ribosomal protein S16 NP_224324.1 148616 D 115713 CDS NP_224325.1 15618041 894638 148989..150074 1 NC_000922.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; Chlamydial proteins show a C-terminal extension of unknown function; tRNA (guanine-N(1)-)-methyltransferase 150074 trmD 894638 trmD Chlamydophila pneumoniae CWL029 tRNA (guanine-N(1)-)-methyltransferase NP_224325.1 148989 D 115713 CDS NP_224326.1 15618042 894818 150102..150467 1 NC_000922.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 150467 rplS 894818 rplS Chlamydophila pneumoniae CWL029 50S ribosomal protein L19 NP_224326.1 150102 D 115713 CDS NP_224327.1 15618043 894649 150523..151167 1 NC_000922.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 151167 rnhB 894649 rnhB Chlamydophila pneumoniae CWL029 ribonuclease HII NP_224327.1 150523 D 115713 CDS NP_224328.1 15618044 895034 151164..151781 1 NC_000922.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 151781 gmk 895034 gmk Chlamydophila pneumoniae CWL029 guanylate kinase NP_224328.1 151164 D 115713 CDS NP_224329.1 15618045 895570 151778..152071 1 NC_000922.1 hypothetical protein 152071 895570 CPn0121 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224329.1 151778 D 115713 CDS NP_224330.1 15618046 894667 152071..153726 1 NC_000922.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 153726 metG 894667 metG Chlamydophila pneumoniae CWL029 methionyl-tRNA synthetase NP_224330.1 152071 D 115713 CDS NP_224331.1 15618047 894806 complement(153771..155969) 1 NC_000922.1 exodeoxyribonuclease V subunit alpha 155969 recD_1 894806 recD_1 Chlamydophila pneumoniae CWL029 exodeoxyribonuclease V subunit alpha NP_224331.1 153771 R 115713 CDS NP_224332.1 15618048 895197 156614..158071 1 NC_000922.1 hypothetical protein 158071 895197 CPn0124 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224332.1 156614 D 115713 CDS NP_224333.1 15618049 895053 158096..158608 1 NC_000922.1 hypothetical protein 158608 895053 CPn0125 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224333.1 158096 D 115713 CDS NP_224334.1 15618050 895564 158809..161088 1 NC_000922.1 hypothetical protein 161088 895564 CPn0126 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224334.1 158809 D 115713 CDS NP_224335.1 15618051 894960 complement(161127..162143) 1 NC_000922.1 cationic amino acid transporter 162143 ytfF 894960 ytfF Chlamydophila pneumoniae CWL029 cationic amino acid transporter NP_224335.1 161127 R 115713 CDS NP_224336.1 15618052 894640 162277..163056 1 NC_000922.1 biotin--protein ligase 163056 894640 CPn0128 Chlamydophila pneumoniae CWL029 biotin--protein ligase NP_224336.1 162277 D 115713 CDS NP_224339.1 15618055 895120 164549..165583 1 NC_000922.1 hypothetical protein 165583 895120 CPn0131 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224339.1 164549 D 115713 CDS NP_224340.1 15618056 894834 165587..166564 1 NC_000922.1 hypothetical protein 166564 894834 CPn0132 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224340.1 165587 D 115713 CDS NP_224341.1 15618057 894804 complement(166561..167334) 1 NC_000922.1 hypothetical protein 167334 894804 CPn0133 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224341.1 166561 R 115713 CDS NP_224342.1 15618058 894660 complement(167464..169098) 1 NC_000922.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GorEL 169098 groEL 894660 groEL Chlamydophila pneumoniae CWL029 molecular chaperone GorEL NP_224342.1 167464 R 115713 CDS NP_224343.1 15618059 894733 complement(169140..169448) 1 NC_000922.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 169448 groES 894733 groES Chlamydophila pneumoniae CWL029 co-chaperonin GroES NP_224343.1 169140 R 115713 CDS NP_224344.1 15618060 894981 complement(169566..171401) 1 NC_000922.1 oligopeptidase 171401 pepF 894981 pepF Chlamydophila pneumoniae CWL029 oligopeptidase NP_224344.1 169566 R 115713 CDS NP_224345.1 15618061 894813 complement(171499..172254) 1 NC_000922.1 Acr family transporter 172254 ybgI 894813 ybgI Chlamydophila pneumoniae CWL029 Acr family transporter NP_224345.1 171499 R 115713 CDS NP_224346.1 15618062 894914 complement(172697..174019) 1 NC_000922.1 catalyzes the formation of 5-aminolevulinate from (S)-4-amino-5-oxopentanoate; glutamate-1-semialdehyde aminotransferase 174019 hemL 894914 hemL Chlamydophila pneumoniae CWL029 glutamate-1-semialdehyde aminotransferase NP_224346.1 172697 R 115713 CDS NP_224347.1 15618063 894735 complement(174090..174656) 1 NC_000922.1 hypothetical protein 174656 yqgE 894735 yqgE Chlamydophila pneumoniae CWL029 hypothetical protein NP_224347.1 174090 R 115713 CDS NP_224348.1 15618064 895153 complement(174670..175110) 1 NC_000922.1 hypothetical protein 175110 yqdE 895153 yqdE Chlamydophila pneumoniae CWL029 hypothetical protein NP_224348.1 174670 R 115713 CDS NP_224349.1 15618065 894925 complement(175107..175802) 1 NC_000922.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 175802 rpiA 894925 rpiA Chlamydophila pneumoniae CWL029 ribose-5-phosphate isomerase A NP_224349.1 175107 R 115713 CDS NP_224351.1 15618067 894847 complement(176211..177335) 1 NC_000922.1 hypothetical protein 177335 yxjG_1 894847 yxjG_1 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224351.1 176211 R 115713 CDS NP_224352.1 15618068 895029 177963..180563 1 NC_000922.1 Clp protease ATPase 180563 clpB 895029 clpB Chlamydophila pneumoniae CWL029 Clp protease ATPase NP_224352.1 177963 D 115713 CDS NP_224353.1 15618069 894961 180777..182372 1 NC_000922.1 hypothetical protein 182372 894961 CPn0145 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224353.1 180777 D 115713 CDS NP_224354.1 15618070 894970 182613..183098 1 NC_000922.1 hypothetical protein 183098 894970 CPn0146 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224354.1 182613 D 115713 CDS NP_224355.1 15618071 894891 183225..183674 1 NC_000922.1 hypothetical protein 183674 894891 CPn0147 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224355.1 183225 D 115713 CDS NP_224356.1 15618072 894945 183846..185705 1 NC_000922.1 S/T protein kinase 185705 894945 CPn0148 Chlamydophila pneumoniae CWL029 S/T protein kinase NP_224356.1 183846 D 115713 CDS NP_224357.1 15618073 894944 185715..187703 1 NC_000922.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 187703 ligA 894944 ligA Chlamydophila pneumoniae CWL029 NAD-dependent DNA ligase LigA NP_224357.1 185715 D 115713 CDS NP_224358.1 15618074 894903 187834..192447 1 NC_000922.1 hypothetical protein 192447 894903 CPn0150 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224358.1 187834 D 115713 CDS NP_224359.1 15618075 895554 complement(192622..194142) 1 NC_000922.1 monooxygenase 194142 mhpA 895554 mhpA Chlamydophila pneumoniae CWL029 monooxygenase NP_224359.1 192622 R 115713 CDS NP_224360.1 15618076 894917 complement(194315..195265) 1 NC_000922.1 hypothetical protein 195265 894917 CPn0152 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224360.1 194315 R 115713 CDS NP_224361.1 15618077 894824 195433..197895 1 NC_000922.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 197895 leuS 894824 leuS Chlamydophila pneumoniae CWL029 leucyl-tRNA synthetase NP_224361.1 195433 D 115713 CDS NP_224362.1 15618078 894969 197892..199205 1 NC_000922.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 199205 gseA 894969 gseA Chlamydophila pneumoniae CWL029 3-deoxy-D-manno-octulosonic-acid transferase NP_224362.1 197892 D 115713 CDS NP_224363.1 15618079 894937 complement(199485..199691) 1 NC_000922.1 hypothetical protein 199691 894937 CPn0155 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224363.1 199485 R 115713 CDS NP_224365.1 15618081 895553 complement(200295..200723) 1 NC_000922.1 hypothetical protein 200723 895553 CPn0157 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224365.1 200295 R 115713 CDS NP_224366.1 15618082 894679 complement(200891..201430) 1 NC_000922.1 hypothetical protein 201430 894679 CPn0158 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224366.1 200891 R 115713 CDS NP_224367.1 15618083 895582 complement(201464..201772) 1 NC_000922.1 hypothetical protein 201772 895582 CPn0159 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224367.1 201464 R 115713 CDS NP_224368.1 15618084 895592 complement(202124..203791) 1 NC_000922.1 catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; diphosphate--fructose-6-phosphate 1-phosphotransferase 203791 pfkA_1 895592 pfkA_1 Chlamydophila pneumoniae CWL029 diphosphate--fructose-6-phosphate 1-phosphotransferase NP_224368.1 202124 R 115713 CDS NP_224369.1 15618085 895571 complement(203795..204622) 1 NC_000922.1 acetyltransferase 204622 895571 CPn0161 Chlamydophila pneumoniae CWL029 acetyltransferase NP_224369.1 203795 R 115713 CDS NP_224370.1 15618086 895423 complement(204800..205828) 1 NC_000922.1 hypothetical protein 205828 895423 CPn0162 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224370.1 204800 R 115713 CDS NP_224371.1 15618087 895102 206026..206397 1 NC_000922.1 hypothetical protein 206397 895102 CPn0163 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224371.1 206026 D 115713 CDS NP_224372.1 15618088 894886 206498..207001 1 NC_000922.1 hypothetical protein 207001 894886 CPn0164 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224372.1 206498 D 115713 CDS NP_224373.1 15618089 894775 206998..207585 1 NC_000922.1 hypothetical protein 207585 894775 CPn0165 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224373.1 206998 D 115713 CDS NP_224374.1 15618090 895014 207630..207965 1 NC_000922.1 hypothetical protein 207965 895014 CPn0166 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224374.1 207630 D 115713 CDS NP_224375.1 15618091 895538 complement(207974..208306) 1 NC_000922.1 hypothetical protein 208306 895538 CPn0167 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224375.1 207974 R 115713 CDS NP_224376.1 15618092 894795 complement(208414..208641) 1 NC_000922.1 hypothetical protein 208641 894795 CPn0168 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224376.1 208414 R 115713 CDS NP_224377.1 15618093 894946 complement(208707..209501) 1 NC_000922.1 hypothetical protein 209501 894946 CPn0169 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224377.1 208707 R 115713 CDS NP_224378.1 15618094 895083 complement(210022..211026) 1 NC_000922.1 hypothetical protein 211026 895083 CPn0170 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224378.1 210022 R 115713 CDS NP_224379.1 15618095 895050 complement(211146..212435) 1 NC_000922.1 GMP synthase 212435 guaA 895050 guaA Chlamydophila pneumoniae CWL029 GMP synthase NP_224379.1 211146 R 115713 CDS NP_224380.1 15618096 894977 complement(212437..213177) 1 NC_000922.1 inosine 5'-monophosphase dehydrogenase 213177 guaB_1 894977 guaB_1 Chlamydophila pneumoniae CWL029 inosine 5'-monophosphase dehydrogenase NP_224380.1 212437 R 115713 CDS NP_224381.1 15618983 894754 complement(213238..213501) 1 NC_000922.1 inosine 5'-monophosphase dehydrogenase 213501 guaB_2 894754 guaB_2 Chlamydophila pneumoniae CWL029 inosine 5'-monophosphase dehydrogenase NP_224381.1 213238 R 115713 CDS NP_224382.1 15618097 895119 complement(213712..213987) 1 NC_000922.1 hypothetical protein 213987 895119 CPn0173 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224382.1 213712 R 115713 CDS NP_224383.1 15618098 894933 214257..214727 1 NC_000922.1 hypothetical protein 214727 894933 CPn0174 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224383.1 214257 D 115713 CDS NP_224384.1 15618099 895092 214898..215278 1 NC_000922.1 hypothetical protein 215278 895092 CPn0175 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224384.1 214898 D 115713 CDS NP_224385.1 15618100 894920 215286..216521 1 NC_000922.1 hypothetical protein 216521 894920 CPn0176 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224385.1 215286 D 115713 CDS NP_224386.1 15618101 894825 complement(216605..217459) 1 NC_000922.1 hypothetical protein 217459 894825 CPn0177 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224386.1 216605 R 115713 CDS NP_224387.1 15618102 895110 complement(217786..218052) 1 NC_000922.1 hypothetical protein 218052 895110 CPn0178 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224387.1 217786 R 115713 CDS NP_224388.1 15618103 895000 complement(218053..218403) 1 NC_000922.1 hypothetical protein 218403 895000 CPn0179 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224388.1 218053 R 115713 CDS NP_224389.1 15618104 894884 complement(218352..218906) 1 NC_000922.1 hypothetical protein 218906 894884 CPn0180 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224389.1 218352 R 115713 CDS NP_224390.1 15618105 895169 complement(218774..219175) 1 NC_000922.1 hypothetical protein 219175 895169 CPn0181 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224390.1 218774 R 115713 CDS NP_224391.1 15618106 894812 complement(219331..220695) 1 NC_000922.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 220695 accC 894812 accC Chlamydophila pneumoniae CWL029 acetyl-CoA carboxylase biotin carboxylase subunit NP_224391.1 219331 R 115713 CDS NP_224392.1 15618107 894979 complement(220692..221195) 1 NC_000922.1 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 221195 accB 894979 accB Chlamydophila pneumoniae CWL029 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit NP_224392.1 220692 R 115713 CDS NP_224393.1 15618108 895189 complement(221218..221775) 1 NC_000922.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 221775 efp_1 895189 efp_1 Chlamydophila pneumoniae CWL029 elongation factor P NP_224393.1 221218 R 115713 CDS NP_224394.1 15618109 894913 complement(221762..222451) 1 NC_000922.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 222451 rpe 894913 rpe Chlamydophila pneumoniae CWL029 ribulose-phosphate 3-epimerase NP_224394.1 221762 R 115713 CDS NP_224395.1 15618110 895103 222899..224071 1 NC_000922.1 protein IncA 224071 895103 CPn0186 Chlamydophila pneumoniae CWL029 protein IncA NP_224395.1 222899 D 115713 CDS NP_224396.1 15618111 894878 224248..225048 1 NC_000922.1 methylase 225048 894878 CPn0187 Chlamydophila pneumoniae CWL029 methylase NP_224396.1 224248 D 115713 CDS NP_224397.1 15618112 895563 225111..226403 1 NC_000922.1 hypothetical protein 226403 895563 CPn0188 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224397.1 225111 D 115713 CDS NP_224398.1 15618113 894982 226400..229828 1 NC_000922.1 hypothetical protein 229828 894982 CPn0189 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224398.1 226400 D 115713 CDS NP_224399.1 15618114 895040 229919..231277 1 NC_000922.1 hypothetical protein 231277 895040 CPn0190 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224399.1 229919 D 115713 CDS NP_224400.1 15618115 895595 complement(231311..231991) 1 NC_000922.1 amino acid ABC transporter ATPase 231991 glnQ 895595 glnQ Chlamydophila pneumoniae CWL029 amino acid ABC transporter ATPase NP_224400.1 231311 R 115713 CDS NP_224401.1 15618116 895015 complement(231981..232634) 1 NC_000922.1 amino acid ABC transporter ATPase 232634 glnP 895015 glnP Chlamydophila pneumoniae CWL029 amino acid ABC transporter ATPase NP_224401.1 231981 R 115713 CDS NP_224402.1 15618117 895558 complement(232683..233126) 1 NC_000922.1 arginine repressor ArgR 233126 argR 895558 argR Chlamydophila pneumoniae CWL029 arginine repressor ArgR NP_224402.1 232683 R 115713 CDS NP_224403.1 15618118 895167 233210..234244 1 NC_000922.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 234244 gcp_2 895167 gcp_2 Chlamydophila pneumoniae CWL029 DNA-binding/iron metalloprotein/AP endonuclease NP_224403.1 233210 D 115713 CDS NP_224404.1 15618119 895059 234190..235788 1 NC_000922.1 oligopeptide binding protein 235788 oppA_1 895059 oppA_1 Chlamydophila pneumoniae CWL029 oligopeptide binding protein NP_224404.1 234190 D 115713 CDS NP_224405.1 15618120 894985 235939..237522 1 NC_000922.1 oligopeptide binding protein 237522 oppA_2 894985 oppA_2 Chlamydophila pneumoniae CWL029 oligopeptide binding protein NP_224405.1 235939 D 115713 CDS NP_224406.1 15618121 895178 237578..238885 1 NC_000922.1 oligopeptide binding protein 238885 oppA_3 895178 oppA_3 Chlamydophila pneumoniae CWL029 oligopeptide binding protein NP_224406.1 237578 D 115713 CDS NP_224407.1 15618122 895534 239169..240749 1 NC_000922.1 oligopeptide binding protein 240749 oppA_4 895534 oppA_4 Chlamydophila pneumoniae CWL029 oligopeptide binding protein NP_224407.1 239169 D 115713 CDS NP_224408.1 15618123 895066 241042..241986 1 NC_000922.1 oligopeptide permease 241986 oppB_1 895066 oppB_1 Chlamydophila pneumoniae CWL029 oligopeptide permease NP_224408.1 241042 D 115713 CDS NP_224409.1 15618124 894863 242017..242871 1 NC_000922.1 oligopeptide permease 242871 oppC_1 894863 oppC_1 Chlamydophila pneumoniae CWL029 oligopeptide permease NP_224409.1 242017 D 115713 CDS NP_224410.1 15618125 895051 242864..243718 1 NC_000922.1 peptide ABC transporter ATPase 243718 oppD 895051 oppD Chlamydophila pneumoniae CWL029 peptide ABC transporter ATPase NP_224410.1 242864 D 115713 CDS NP_224411.1 15618126 895536 243715..244503 1 NC_000922.1 peptide ABC transporter ATPase 244503 oppF 895536 oppF Chlamydophila pneumoniae CWL029 peptide ABC transporter ATPase NP_224411.1 243715 D 115713 CDS NP_224414.1 15618129 895074 246133..246330 1 NC_000922.1 hypothetical protein 246330 895074 CPn0205 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224414.1 246133 D 115713 CDS NP_224415.1 15618130 895080 246409..247164 1 NC_000922.1 hypothetical protein 247164 895080 CPn0206 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224415.1 246409 D 115713 CDS NP_224416.1 15618131 895075 247208..248620 1 NC_000922.1 dicarboxylase translocator 248620 ybhI 895075 ybhI Chlamydophila pneumoniae CWL029 dicarboxylase translocator NP_224416.1 247208 D 115713 CDS NP_224417.1 15618132 895095 248953..250605 1 NC_000922.1 catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; diphosphate--fructose-6-phosphate 1-phosphotransferase 250605 pfkA_2 895095 pfkA_2 Chlamydophila pneumoniae CWL029 diphosphate--fructose-6-phosphate 1-phosphotransferase NP_224417.1 248953 D 115713 CDS NP_224418.1 15618133 895076 251036..251275 1 NC_000922.1 hypothetical protein 251275 895076 CPn0209 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224418.1 251036 D 115713 CDS NP_224421.1 15618136 895068 complement(252885..254066) 1 NC_000922.1 hypothetical protein 254066 895068 CPn0212 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224421.1 252885 R 115713 CDS NP_224422.1 15618137 894860 complement(254187..254342) 1 NC_000922.1 hypothetical protein 254342 894860 CPn0213 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224422.1 254187 R 115713 CDS NP_224423.1 15618138 895145 complement(254443..255657) 1 NC_000922.1 hypothetical protein 255657 895145 CPn0214 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224423.1 254443 R 115713 CDS NP_224424.1 15618139 894787 complement(255756..257015) 1 NC_000922.1 hypothetical protein 257015 894787 CPn0215 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224424.1 255756 R 115713 CDS NP_224425.1 15618140 894932 complement(257171..257608) 1 NC_000922.1 hypothetical protein 257608 894932 CPn0216 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224425.1 257171 R 115713 CDS NP_224426.1 15618141 894823 257896..258582 1 NC_000922.1 hypothetical protein 258582 ypdP 894823 ypdP Chlamydophila pneumoniae CWL029 hypothetical protein NP_224426.1 257896 D 115713 CDS NP_224427.1 15618142 895044 complement(258579..259058) 1 NC_000922.1 hypothetical protein 259058 895044 CPn0218 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224427.1 258579 R 115713 CDS NP_224428.1 15618143 895042 259357..260475 1 NC_000922.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4, 5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7- deazaguanosine); queuine tRNA-ribosyltransferase 260475 tgt 895042 tgt Chlamydophila pneumoniae CWL029 queuine tRNA-ribosyltransferase NP_224428.1 259357 D 115713 CDS NP_224429.1 15618144 895555 260696..261241 1 NC_000922.1 hypothetical protein 261241 895555 CPn0220 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224429.1 260696 D 115713 CDS NP_224430.1 15618145 895009 261657..262067 1 NC_000922.1 hypothetical protein 262067 895009 CPn0221 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224430.1 261657 D 115713 CDS NP_224431.1 15618146 895013 262504..262845 1 NC_000922.1 hypothetical protein 262845 895013 CPn0222 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224431.1 262504 D 115713 CDS NP_224432.1 15618147 895039 262956..263336 1 NC_000922.1 hypothetical protein 263336 895039 CPn0223 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224432.1 262956 D 115713 CDS NP_224433.1 15618148 894976 263435..263677 1 NC_000922.1 hypothetical protein 263677 894976 CPn0224 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224433.1 263435 D 115713 CDS NP_224434.1 15618149 894750 263873..264544 1 NC_000922.1 hypothetical protein 264544 894750 CPn0225 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224434.1 263873 D 115713 CDS NP_224435.1 15618150 895038 264566..264970 1 NC_000922.1 hypothetical protein 264970 895038 CPn0226 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224435.1 264566 D 115713 CDS NP_224436.1 15618151 894900 complement(265006..265416) 1 NC_000922.1 disulfide oxidoreductase 265416 dsbB 894900 dsbB Chlamydophila pneumoniae CWL029 disulfide oxidoreductase NP_224436.1 265006 R 115713 CDS NP_224437.1 15618152 894954 complement(265409..266110) 1 NC_000922.1 disulfide bond chaperone 266110 dsbG 894954 dsbG Chlamydophila pneumoniae CWL029 disulfide bond chaperone NP_224437.1 265409 R 115713 CDS NP_224438.1 15618153 894931 266328..267563 1 NC_000922.1 hypothetical protein 267563 894931 CPn0229 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224438.1 266328 D 115713 CDS NP_224439.1 15618154 894893 complement(267573..268253) 1 NC_000922.1 hypothetical protein 268253 894893 CPn0230 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224439.1 267573 R 115713 CDS NP_224440.1 15618155 894798 complement(268250..268957) 1 NC_000922.1 nitrate/iron ABC transporter ATPase 268957 tauB 894798 tauB Chlamydophila pneumoniae CWL029 nitrate/iron ABC transporter ATPase NP_224440.1 268250 R 115713 CDS NP_224441.1 15618156 895520 complement(269229..270122) 1 NC_000922.1 5'-methylthioadenosine nucleosidase 270122 895520 CPn0232 Chlamydophila pneumoniae CWL029 5'-methylthioadenosine nucleosidase NP_224441.1 269229 R 115713 CDS NP_224442.1 15618157 894908 complement(270245..270424) 1 NC_000922.1 hypothetical protein 270424 894908 CPn0233 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224442.1 270245 R 115713 CDS NP_224443.1 15618158 895112 complement(270545..271240) 1 NC_000922.1 hypothetical protein 271240 895112 CPn0234 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224443.1 270545 R 115713 CDS NP_224444.1 15618159 895121 271416..272180 1 NC_000922.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 272180 kdsB 895121 kdsB Chlamydophila pneumoniae CWL029 3-deoxy-manno-octulosonate cytidylyltransferase NP_224444.1 271416 D 115713 CDS NP_224445.1 15618160 895146 272156..273769 1 NC_000922.1 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 273769 pyrG 895146 pyrG Chlamydophila pneumoniae CWL029 CTP synthetase NP_224445.1 272156 D 115713 CDS NP_224446.1 15618161 895148 273762..274217 1 NC_000922.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase 274217 yggF 895148 yggF Chlamydophila pneumoniae CWL029 Holliday junction resolvase NP_224446.1 273762 D 115713 CDS NP_224447.1 15618162 895162 274303..275841 1 NC_000922.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 275841 zwf 895162 zwf Chlamydophila pneumoniae CWL029 glucose-6-phosphate 1-dehydrogenase NP_224447.1 274303 D 115713 CDS NP_224448.1 15618163 895149 275899..276675 1 NC_000922.1 catalyzes the formation of 6-phospho-D-gluconate from 6-phospho-D-glucono-1,5-lactone; 6-phosphogluconolactonase 276675 devB 895149 devB Chlamydophila pneumoniae CWL029 6-phosphogluconolactonase NP_224448.1 275899 D 115713 CDS NP_224449.1 15618164 895173 complement(276695..277861) 1 NC_000922.1 hypothetical protein 277861 895173 CPn0240 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224449.1 276695 R 115713 CDS NP_224450.1 15618165 895154 complement(278200..279354) 1 NC_000922.1 hypothetical protein 279354 895154 CPn0241 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224450.1 278200 R 115713 CDS NP_224451.1 15618166 895155 complement(279484..279918) 1 NC_000922.1 hypothetical protein 279918 895155 CPn0242 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224451.1 279484 R 115713 CDS NP_224452.1 15618167 895012 complement(280130..280555) 1 NC_000922.1 hypothetical protein 280555 895012 CPn0243 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224452.1 280130 R 115713 CDS NP_224453.1 15618168 895175 280918..281559 1 NC_000922.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 281559 adk 895175 adk Chlamydophila pneumoniae CWL029 adenylate kinase NP_224453.1 280918 D 115713 CDS NP_224454.1 15618169 894996 281645..282502 1 NC_000922.1 polysaccharide hydrolase invasin repeat-containing protein 282502 ydhO 894996 ydhO Chlamydophila pneumoniae CWL029 polysaccharide hydrolase invasin repeat-containing protein NP_224454.1 281645 D 115713 CDS NP_224455.1 15618170 895171 complement(282548..282952) 1 NC_000922.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 282952 rpsI 895171 rpsI Chlamydophila pneumoniae CWL029 30S ribosomal protein S9 NP_224455.1 282548 R 115713 CDS NP_224456.1 15618171 894838 complement(282966..283415) 1 NC_000922.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 283415 rplM 894838 rplM Chlamydophila pneumoniae CWL029 50S ribosomal protein L13 NP_224456.1 282966 R 115713 CDS NP_224457.1 15618172 895161 complement(283647..284327) 1 NC_000922.1 ABC transporter ATPase 284327 ycfV 895161 ycfV Chlamydophila pneumoniae CWL029 ABC transporter ATPase NP_224457.1 283647 R 115713 CDS NP_224458.1 15618173 895147 complement(284330..285841) 1 NC_000922.1 hypothetical protein 285841 895147 CPn0249 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224458.1 284330 R 115713 CDS NP_224459.1 15618174 895192 complement(285899..286057) 1 NC_000922.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 286057 rpmG 895192 rpmG Chlamydophila pneumoniae CWL029 50S ribosomal protein L33 NP_224459.1 285899 R 115713 CDS NP_224460.1 15618175 894671 286060..287562 1 NC_000922.1 hypothetical protein 287562 894671 CPn0251 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224460.1 286060 D 115713 CDS NP_224461.1 15618176 895533 complement(288456..289262) 1 NC_000922.1 hypothetical protein 289262 895533 CPn0254 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224461.1 288456 R 115713 CDS NP_224462.1 15618177 894855 complement(289326..290165) 1 NC_000922.1 hypothetical protein 290165 894855 CPn0255 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224462.1 289326 R 115713 CDS NP_224463.1 15618178 895174 complement(290395..291264) 1 NC_000922.1 hypothetical protein 291264 895174 CPn0256 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224463.1 290395 R 115713 CDS NP_224464.1 15618179 895523 complement(291264..292127) 1 NC_000922.1 hypothetical protein 292127 895523 CPn0257 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224464.1 291264 R 115713 CDS NP_224465.1 15618180 895004 complement(293545..294045) 1 NC_000922.1 protein translocase subunit 294045 secA_1 895004 secA_1 Chlamydophila pneumoniae CWL029 protein translocase subunit NP_224465.1 293545 R 115713 CDS NP_224466.1 15618181 895141 294302..295036 1 NC_000922.1 PP-loop superfamily ATPase 295036 ydaO 895141 ydaO Chlamydophila pneumoniae CWL029 PP-loop superfamily ATPase NP_224466.1 294302 D 115713 CDS NP_224467.1 15618182 894926 295091..295936 1 NC_000922.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 295936 surE 894926 surE Chlamydophila pneumoniae CWL029 stationary phase survival protein SurE NP_224467.1 295091 D 115713 CDS NP_224468.1 15618183 895212 296249..297139 1 NC_000922.1 hypothetical protein 297139 yqfU 895212 yqfU Chlamydophila pneumoniae CWL029 hypothetical protein NP_224468.1 296249 D 115713 CDS NP_224469.1 15618184 894832 complement(297152..297730) 1 NC_000922.1 aromatic acid decarboxylase 297730 ubiD 894832 ubiD Chlamydophila pneumoniae CWL029 aromatic acid decarboxylase NP_224469.1 297152 R 115713 CDS NP_224470.1 15618185 894841 complement(297727..298620) 1 NC_000922.1 UbiA prenyltransferase catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; prenyltransferase 298620 ubiA 894841 ubiA Chlamydophila pneumoniae CWL029 prenyltransferase NP_224470.1 297727 R 115713 CDS NP_224471.1 15618186 895190 299184..299879 1 NC_000922.1 hypothetical protein 299879 895190 CPn0266 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224471.1 299184 D 115713 CDS NP_224472.1 15618187 895515 300122..300913 1 NC_000922.1 hypothetical protein 300913 895515 CPn0267 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224472.1 300122 D 115713 CDS NP_224473.1 15618188 894829 300935..301321 1 NC_000922.1 hypothetical protein 301321 894829 CPn0268 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224473.1 300935 D 115713 CDS NP_224474.1 15618189 894790 complement(301473..302450) 1 NC_000922.1 dipeptidase 302450 894790 CPn0269 Chlamydophila pneumoniae CWL029 dipeptidase NP_224474.1 301473 R 115713 CDS NP_224475.1 15618190 895210 complement(302465..303325) 1 NC_000922.1 SuA5 superfamily-related protein 303325 ywlC 895210 ywlC Chlamydophila pneumoniae CWL029 SuA5 superfamily-related protein NP_224475.1 302465 R 115713 CDS NP_224476.1 15618191 895195 303634..304365 1 NC_000922.1 lysophospholipase esterase 304365 895195 CPn0271 Chlamydophila pneumoniae CWL029 lysophospholipase esterase NP_224476.1 303634 D 115713 CDS NP_224477.1 15618192 894839 complement(304337..305233) 1 NC_000922.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 305233 dnaX_2 894839 dnaX_2 Chlamydophila pneumoniae CWL029 DNA polymerase III subunit delta' NP_224477.1 304337 R 115713 CDS NP_224478.1 15618193 895180 complement(305224..305844) 1 NC_000922.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 305844 tmk 895180 tmk Chlamydophila pneumoniae CWL029 thymidylate kinase NP_224478.1 305224 R 115713 CDS NP_224479.1 15618194 894973 complement(305849..308353) 1 NC_000922.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 308353 gyrA_1 894973 gyrA_1 Chlamydophila pneumoniae CWL029 DNA gyrase subunit A NP_224479.1 305849 R 115713 CDS NP_224480.1 15618195 895198 complement(308369..310786) 1 NC_000922.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 310786 gyrB 895198 gyrB Chlamydophila pneumoniae CWL029 DNA gyrase subunit B NP_224480.1 308369 R 115713 CDS NP_224481.1 15618196 895156 complement(310790..311137) 1 NC_000922.1 hypothetical protein 311137 895156 CPn0276 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224481.1 310790 R 115713 CDS NP_224482.1 15618197 895186 complement(311401..311910) 1 NC_000922.1 hypothetical protein 311910 895186 CPn0277 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224482.1 311401 R 115713 CDS NP_224483.1 15618198 894792 complement(312057..312875) 1 NC_000922.1 outer membrane lipoprotein 312875 894792 CPn0278 Chlamydophila pneumoniae CWL029 outer membrane lipoprotein NP_224483.1 312057 R 115713 CDS NP_224484.1 15618199 895194 complement(312872..313537) 1 NC_000922.1 ABC transporter permease 313537 895194 CPn0279 Chlamydophila pneumoniae CWL029 ABC transporter permease NP_224484.1 312872 R 115713 CDS NP_224485.1 15618200 894948 complement(313547..314572) 1 NC_000922.1 peptide ABC transporter ATPase 314572 dppF_1 894948 dppF_1 Chlamydophila pneumoniae CWL029 peptide ABC transporter ATPase NP_224485.1 313547 R 115713 CDS NP_224486.1 15618201 894851 315057..316106 1 NC_000922.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; fructose-bisphosphate aldolase 316106 dhnA 894851 dhnA Chlamydophila pneumoniae CWL029 fructose-bisphosphate aldolase NP_224486.1 315057 D 115713 CDS NP_224487.1 15618202 895209 316126..317532 1 NC_000922.1 amino acid transporter 317532 xasA 895209 xasA Chlamydophila pneumoniae CWL029 amino acid transporter NP_224487.1 316126 D 115713 CDS NP_224488.1 15618203 895205 complement(317529..318497) 1 NC_000922.1 hypothetical protein 318497 895205 CPn0283 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224488.1 317529 R 115713 CDS NP_224489.1 15618204 894800 complement(318548..319045) 1 NC_000922.1 hypothetical protein 319045 894800 CPn0284 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224489.1 318548 R 115713 CDS NP_224490.1 15618205 895201 complement(319048..320595) 1 NC_000922.1 hypothetical protein 320595 895201 CPn0285 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224490.1 319048 R 115713 CDS NP_224491.1 15618206 894843 complement(320647..322059) 1 NC_000922.1 Mg2+ transporter 322059 mgtE 894843 mgtE Chlamydophila pneumoniae CWL029 Mg2+ transporter NP_224491.1 320647 R 115713 CDS NP_224492.1 15618207 895214 complement(322086..324221) 1 NC_000922.1 hypothetical protein 324221 895214 CPn0287 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224492.1 322086 R 115713 CDS NP_224493.1 15618208 894809 complement(324568..325716) 1 NC_000922.1 hypothetical protein 325716 894809 CPn0288 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224493.1 324568 R 115713 CDS NP_224494.1 15618209 894826 325812..326999 1 NC_000922.1 neutral amino acid (glutamate) transporter 326999 aaaT 894826 aaaT Chlamydophila pneumoniae CWL029 neutral amino acid (glutamate) transporter NP_224494.1 325812 D 115713 CDS NP_224495.1 15618210 895041 327042..328526 1 NC_000922.1 Na-dependent transporter 328526 895041 CPn0290 Chlamydophila pneumoniae CWL029 Na-dependent transporter NP_224495.1 327042 D 115713 CDS NP_224496.1 15618211 895081 328667..329197 1 NC_000922.1 inclusion membrane protein B 329197 incB 895081 incB Chlamydophila pneumoniae CWL029 inclusion membrane protein B NP_224496.1 328667 D 115713 CDS NP_224497.1 15618212 895208 329228..329839 1 NC_000922.1 inclusion membrane protein C 329839 incC 895208 incC Chlamydophila pneumoniae CWL029 inclusion membrane protein C NP_224497.1 329228 D 115713 CDS NP_224498.1 15618213 895085 329949..332726 1 NC_000922.1 hypothetical protein 332726 895085 CPn0293 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224498.1 329949 D 115713 CDS NP_224499.1 15618214 894983 333092..333505 1 NC_000922.1 cAMP-dependent protein kinase regulatory subunit 333505 894983 CPn0294 Chlamydophila pneumoniae CWL029 cAMP-dependent protein kinase regulatory subunit NP_224499.1 333092 D 115713 CDS NP_224500.1 15618215 895028 complement(333624..333863) 1 NC_000922.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 333863 acpP 895028 acpP Chlamydophila pneumoniae CWL029 acyl carrier protein NP_224500.1 333624 R 115713 CDS NP_224501.1 15618216 894695 complement(334019..334765) 1 NC_000922.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 334765 fabG 894695 fabG Chlamydophila pneumoniae CWL029 3-ketoacyl-ACP reductase NP_224501.1 334019 R 115713 CDS NP_224502.1 15618217 894994 complement(334771..335697) 1 NC_000922.1 ACP S-malonyltransferase 335697 fabD 894994 fabD Chlamydophila pneumoniae CWL029 ACP S-malonyltransferase NP_224502.1 334771 R 115713 CDS NP_224503.1 15618218 895109 complement(335714..336721) 1 NC_000922.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 336721 fabH 895109 fabH Chlamydophila pneumoniae CWL029 3-oxoacyl-ACP synthase NP_224503.1 335714 R 115713 CDS NP_224504.1 15618219 895111 336816..337418 1 NC_000922.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 337418 recR 895111 recR Chlamydophila pneumoniae CWL029 recombination protein RecR NP_224504.1 336816 D 115713 CDS NP_224505.1 15618220 894881 337783..340155 1 NC_000922.1 hypothetical protein 340155 yaeT 894881 yaeT Chlamydophila pneumoniae CWL029 hypothetical protein NP_224505.1 337783 D 115713 CDS NP_224506.1 15618221 895026 340250..340765 1 NC_000922.1 OmpH-like outer membrane protein 340765 895026 CPn0301 Chlamydophila pneumoniae CWL029 OmpH-like outer membrane protein NP_224506.1 340250 D 115713 CDS NP_224507.1 15618222 894718 340787..341869 1 NC_000922.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 341869 lpxD 894718 lpxD Chlamydophila pneumoniae CWL029 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase NP_224507.1 340787 D 115713 CDS NP_224508.1 15618223 895101 complement(341918..342958) 1 NC_000922.1 hypothetical protein 342958 895101 CPn0303 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224508.1 341918 R 115713 CDS NP_224509.1 15618224 895016 343133..344161 1 NC_000922.1 pyruvate dehydrogenase subunit alpha 344161 pdhA 895016 pdhA Chlamydophila pneumoniae CWL029 pyruvate dehydrogenase subunit alpha NP_224509.1 343133 D 115713 CDS NP_224510.1 15618225 894791 344154..345140 1 NC_000922.1 pyruvate dehydrogenase subunit beta 345140 pdhB 894791 pdhB Chlamydophila pneumoniae CWL029 pyruvate dehydrogenase subunit beta NP_224510.1 344154 D 115713 CDS NP_224511.1 15618226 894987 345145..346434 1 NC_000922.1 Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA; branched-chain alpha-keto acid dehydrogenase subunit E2 346434 pdhC 894987 pdhC Chlamydophila pneumoniae CWL029 branched-chain alpha-keto acid dehydrogenase subunit E2 NP_224511.1 345145 D 115713 CDS NP_224512.1 15618227 895140 complement(346512..348986) 1 NC_000922.1 glycogen phosphorylase 348986 glgP 895140 glgP Chlamydophila pneumoniae CWL029 glycogen phosphorylase NP_224512.1 346512 R 115713 CDS NP_224513.1 15618228 895089 349234..349599 1 NC_000922.1 hypothetical protein 349599 895089 CPn0308 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224513.1 349234 D 115713 CDS NP_224514.1 15618229 895122 complement(349592..350974) 1 NC_000922.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosome replication initiator DnaA 350974 dnaA 895122 dnaA Chlamydophila pneumoniae CWL029 chromosome replication initiator DnaA NP_224514.1 349592 R 115713 CDS NP_224515.1 15618230 895540 complement(351046..353433) 1 NC_000922.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 353433 60IM 895540 60IM Chlamydophila pneumoniae CWL029 inner membrane protein translocase component YidC NP_224515.1 351046 R 115713 CDS NP_224516.1 15618231 895071 complement(353572..354438) 1 NC_000922.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 354438 lgt 895071 lgt Chlamydophila pneumoniae CWL029 prolipoprotein diacylglyceryl transferase NP_224516.1 353572 R 115713 CDS NP_224517.1 15618232 895544 354524..354979 1 NC_000922.1 hypothetical protein 354979 895544 CPn0312 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224517.1 354524 D 115713 CDS NP_224518.1 15618233 894726 354990..355358 1 NC_000922.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 355358 acpS 894726 acpS Chlamydophila pneumoniae CWL029 4'-phosphopantetheinyl transferase NP_224518.1 354990 D 115713 CDS NP_224519.1 15618234 894975 complement(355350..356285) 1 NC_000922.1 thioredoxin reductase 356285 trxB 894975 trxB Chlamydophila pneumoniae CWL029 thioredoxin reductase NP_224519.1 355350 R 115713 CDS NP_224520.1 15618235 895056 356977..358719 1 NC_000922.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 358719 rpsA 895056 rpsA Chlamydophila pneumoniae CWL029 30S ribosomal protein S1 NP_224520.1 356977 D 115713 CDS NP_224521.1 15618236 895468 358820..360124 1 NC_000922.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 360124 nusA 895468 nusA Chlamydophila pneumoniae CWL029 transcription elongation factor NusA NP_224521.1 358820 D 115713 CDS NP_224522.1 15618237 894990 360081..362753 1 NC_000922.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 362753 infB 894990 infB Chlamydophila pneumoniae CWL029 translation initiation factor IF-2 NP_224522.1 360081 D 115713 CDS NP_224523.1 15618238 895549 362767..363129 1 NC_000922.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 363129 rbfA 895549 rbfA Chlamydophila pneumoniae CWL029 ribosome-binding factor A NP_224523.1 362767 D 115713 CDS NP_224524.1 15618239 895580 363175..363882 1 NC_000922.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 363882 truB 895580 truB Chlamydophila pneumoniae CWL029 tRNA pseudouridine synthase B NP_224524.1 363175 D 115713 CDS NP_224525.1 15618240 894918 363860..364786 1 NC_000922.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 364786 ribF 894918 ribF Chlamydophila pneumoniae CWL029 bifunctional riboflavin kinase/FMN adenylyltransferase NP_224525.1 363860 D 115713 CDS NP_224526.1 15618241 895594 complement(364764..365858) 1 NC_000922.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 365858 ychF 895594 ychF Chlamydophila pneumoniae CWL029 GTP-dependent nucleic acid-binding protein EngD NP_224526.1 364764 R 115713 CDS NP_224527.1 15618242 895218 366249..367331 1 NC_000922.1 type III secretion system protein 367331 yscU 895218 yscU Chlamydophila pneumoniae CWL029 type III secretion system protein NP_224527.1 366249 D 115713 CDS NP_224528.1 15618243 895498 367331..369463 1 NC_000922.1 low calcium response D 369463 lcrD 895498 lcrD Chlamydophila pneumoniae CWL029 low calcium response D NP_224528.1 367331 D 115713 CDS NP_224529.1 15618244 895078 369492..370691 1 NC_000922.1 low calcium response E 370691 lcrE 895078 lcrE Chlamydophila pneumoniae CWL029 low calcium response E NP_224529.1 369492 D 115713 CDS NP_224530.1 15618245 895118 370708..371151 1 NC_000922.1 secretion chaperone 371151 sycE 895118 sycE Chlamydophila pneumoniae CWL029 secretion chaperone NP_224530.1 370708 D 115713 CDS NP_224531.1 15618246 895084 371148..372728 1 NC_000922.1 amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 372728 malQ 895084 malQ Chlamydophila pneumoniae CWL029 4-alpha-glucanotransferase NP_224531.1 371148 D 115713 CDS NP_224532.1 15618247 895130 372945..373214 1 NC_000922.1 required for 70S ribosome assembly; 50S ribosomal protein L28 373214 rpmB 895130 rpmB Chlamydophila pneumoniae CWL029 50S ribosomal protein L28 NP_224532.1 372945 D 115713 CDS NP_224533.1 15618248 894714 373241..374995 1 NC_000922.1 hypothetical protein 374995 894714 CPn0328 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224533.1 373241 D 115713 CDS NP_224534.1 15618249 894814 375088..376149 1 NC_000922.1 phopholipase D 376149 894814 CPn0329 Chlamydophila pneumoniae CWL029 phopholipase D NP_224534.1 375088 D 115713 CDS NP_224535.1 15618250 895011 complement(376199..376675) 1 NC_000922.1 hypothetical protein 376675 895011 CPn0330 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224535.1 376199 R 115713 CDS NP_224536.1 15618251 895508 complement(376698..378437) 1 NC_000922.1 hypothetical protein 378437 895508 CPn0331 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224536.1 376698 R 115713 CDS NP_224537.1 15618252 895535 complement(378533..378655) 1 NC_000922.1 hypothetical protein 378655 895535 CPn0332 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224537.1 378533 R 115713 CDS NP_224538.1 15618253 895560 complement(378797..379090) 1 NC_000922.1 late transcription unit B protein 379090 895560 CPn0333 Chlamydophila pneumoniae CWL029 late transcription unit B protein NP_224538.1 378797 R 115713 CDS NP_224539.1 15618254 894764 379311..379826 1 NC_000922.1 hypothetical protein 379826 894764 CPn0334 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224539.1 379311 D 115713 CDS NP_224540.1 15618255 894869 379817..380677 1 NC_000922.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 380677 folD 894869 folD Chlamydophila pneumoniae CWL029 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase NP_224540.1 379817 D 115713 CDS NP_224541.1 15618256 894910 380650..381594 1 NC_000922.1 hypothetical protein 381594 yojL 894910 yojL Chlamydophila pneumoniae CWL029 hypothetical protein NP_224541.1 380650 D 115713 CDS NP_224542.1 15618257 895127 complement(381572..382027) 1 NC_000922.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 382027 smpB 895127 smpB Chlamydophila pneumoniae CWL029 SsrA-binding protein NP_224542.1 381572 R 115713 CDS NP_224543.1 15618258 894672 382278..383378 1 NC_000922.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 383378 dnaN 894672 dnaN Chlamydophila pneumoniae CWL029 DNA polymerase III subunit beta NP_224543.1 382278 D 115713 CDS NP_224544.1 15618259 895168 complement(385555..387420) 1 NC_000922.1 metalloprotease 387420 yaeL 895168 yaeL Chlamydophila pneumoniae CWL029 metalloprotease NP_224544.1 385555 R 115713 CDS NP_224545.1 15618260 895172 complement(387433..388572) 1 NC_000922.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 388572 yaeM 895172 yaeM Chlamydophila pneumoniae CWL029 1-deoxy-D-xylulose 5-phosphate reductoisomerase NP_224545.1 387433 R 115713 CDS NP_224546.1 15618261 895177 complement(388701..389675) 1 NC_000922.1 hypothetical protein 389675 ytgD 895177 ytgD Chlamydophila pneumoniae CWL029 hypothetical protein NP_224546.1 388701 R 115713 CDS NP_224547.1 15618262 895188 complement(389675..391021) 1 NC_000922.1 hypothetical protein 391021 ytgC 895188 ytgC Chlamydophila pneumoniae CWL029 hypothetical protein NP_224547.1 389675 R 115713 CDS NP_224548.1 15618263 895181 complement(391024..391803) 1 NC_000922.1 rRNA methylase 391803 ytgB_1 895181 ytgB_1 Chlamydophila pneumoniae CWL029 rRNA methylase NP_224548.1 391024 R 115713 CDS NP_224549.1 15618264 895196 complement(391787..392770) 1 NC_000922.1 solute-binding protein 392770 ytgA 895196 ytgA Chlamydophila pneumoniae CWL029 solute-binding protein NP_224549.1 391787 R 115713 CDS NP_224550.1 15618265 895193 393181..393687 1 NC_000922.1 hypothetical protein 393687 895193 CPn0350 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224550.1 393181 D 115713 CDS NP_224551.1 15618266 895158 393888..395435 1 NC_000922.1 ADP/ATP translocase 395435 adt_1 895158 adt_1 Chlamydophila pneumoniae CWL029 ADP/ATP translocase NP_224551.1 393888 D 115713 CDS NP_224552.1 15618267 895199 395574..396833 1 NC_000922.1 hypothetical protein 396833 895199 CPn0352 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224552.1 395574 D 115713 CDS NP_224553.1 15618268 894836 396893..397138 1 NC_000922.1 hypothetical protein 397138 894836 CPn0353 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224553.1 396893 D 115713 CDS NP_224554.1 15618269 895185 397167..398510 1 NC_000922.1 hypothetical protein 398510 895185 CPn0354 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224554.1 397167 D 115713 CDS NP_224555.1 15618270 894805 complement(398588..399889) 1 NC_000922.1 hypothetical protein 399889 894805 CPn0355 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224555.1 398588 R 115713 CDS NP_224558.1 15618273 894811 complement(401575..401751) 1 NC_000922.1 hypothetical protein 401751 894811 CPn0358 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224558.1 401575 R 115713 CDS NP_224559.1 15618274 894647 402012..403820 1 NC_000922.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 403820 lepA 894647 lepA Chlamydophila pneumoniae CWL029 GTP-binding protein LepA NP_224559.1 402012 D 115713 CDS NP_224560.1 15618275 895135 complement(403919..405358) 1 NC_000922.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 405358 gnd 895135 gnd Chlamydophila pneumoniae CWL029 6-phosphogluconate dehydrogenase NP_224560.1 403919 R 115713 CDS NP_224561.1 15618276 895054 complement(405379..406647) 1 NC_000922.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 406647 tyrS 895054 tyrS Chlamydophila pneumoniae CWL029 tyrosyl-tRNA synthetase NP_224561.1 405379 R 115713 CDS NP_224562.1 15618277 895022 complement(407052..407825) 1 NC_000922.1 expressed in response to temperature increase; may be involved in expression of genes involved in the developmental cycle of Chlamydia; RNA polymerase sigma factor sigma-28 407825 rpsD 895022 rpsD Chlamydophila pneumoniae CWL029 RNA polymerase sigma factor sigma-28 NP_224562.1 407052 R 115713 CDS NP_224563.1 15618278 895008 complement(407940..409688) 1 NC_000922.1 type III secretion system protein 409688 flhA 895008 flhA Chlamydophila pneumoniae CWL029 type III secretion system protein NP_224563.1 407940 R 115713 CDS NP_224564.1 15618279 894923 409966..410241 1 NC_000922.1 ferredoxin IV 410241 fer4 894923 fer4 Chlamydophila pneumoniae CWL029 ferredoxin IV NP_224564.1 409966 D 115713 CDS NP_224565.1 15618280 895139 410528..411547 1 NC_000922.1 hypothetical protein 411547 895139 CPn0365 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224565.1 410528 D 115713 CDS NP_224566.1 15618281 894719 411976..412443 1 NC_000922.1 hypothetical protein 412443 894719 CPn0366 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224566.1 411976 D 115713 CDS NP_224567.1 15618282 895506 413102..413839 1 NC_000922.1 hypothetical protein 413839 895506 CPn0367 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224567.1 413102 D 115713 CDS NP_224568.1 15618283 894743 413790..414110 1 NC_000922.1 hypothetical protein 414110 894743 CPn0368 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224568.1 413790 D 115713 CDS NP_224569.1 15618284 895097 414351..415565 1 NC_000922.1 hypothetical protein 415565 895097 CPn0369 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224569.1 414351 D 115713 CDS NP_224570.1 15618285 895579 415800..416915 1 NC_000922.1 hypothetical protein 416915 895579 CPn0370 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224570.1 415800 D 115713 CDS NP_224571.1 15618286 894940 417147..417506 1 NC_000922.1 hypothetical protein 417506 894940 CPn0371 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224571.1 417147 D 115713 CDS NP_224572.1 15618287 894922 417687..418004 1 NC_000922.1 hypothetical protein 418004 894922 CPn0372 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224572.1 417687 D 115713 CDS NP_224573.1 15618288 895134 418380..420221 1 NC_000922.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-clclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; these proteins appear to consist of duplicate domains as compared to Escherichia coli IspG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 420221 gcpE 895134 gcpE Chlamydophila pneumoniae CWL029 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase NP_224573.1 418380 D 115713 CDS NP_224574.1 15618289 894887 420218..420964 1 NC_000922.1 hypothetical protein 420964 894887 CPn0374 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224574.1 420218 D 115713 CDS NP_224575.1 15618290 894955 421121..421618 1 NC_000922.1 hypothetical protein 421618 894955 CPn0375 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224575.1 421121 D 115713 CDS NP_224576.1 15618291 894873 421854..422297 1 NC_000922.1 hypothetical protein 422297 894873 CPn0376 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224576.1 421854 D 115713 CDS NP_224577.1 15618292 894957 complement(422344..423438) 1 NC_000922.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 423438 sucB_1 894957 sucB_1 Chlamydophila pneumoniae CWL029 dihydrolipoamide succinyltransferase NP_224577.1 422344 R 115713 CDS NP_224578.1 15618293 894939 complement(423442..426168) 1 NC_000922.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 426168 sucA 894939 sucA Chlamydophila pneumoniae CWL029 2-oxoglutarate dehydrogenase E1 NP_224578.1 423442 R 115713 CDS NP_224579.1 15618294 894972 426322..426768 1 NC_000922.1 hypothetical protein 426768 894972 CPn0379 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224579.1 426322 D 115713 CDS NP_224580.1 15618295 894905 426758..427879 1 NC_000922.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 427879 hemN_1 894905 hemN_1 Chlamydophila pneumoniae CWL029 coproporphyrinogen III oxidase NP_224580.1 426758 D 115713 CDS NP_224581.1 15618296 894962 complement(428034..429809) 1 NC_000922.1 hypothetical protein 429809 894962 CPn0381 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224581.1 428034 R 115713 CDS NP_224582.1 15618297 894949 complement(430033..430749) 1 NC_000922.1 SAM-dependent methyltransferase 430749 yabC_1 894949 yabC_1 Chlamydophila pneumoniae CWL029 SAM-dependent methyltransferase NP_224582.1 430033 R 115713 CDS NP_224583.1 15618298 894927 complement(430746..431693) 1 NC_000922.1 hypothetical protein 431693 894927 CPn0383 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224583.1 430746 R 115713 CDS NP_224584.1 15618299 894919 complement(431859..432377) 1 NC_000922.1 histone-like protein 2 432377 hctB 894919 hctB Chlamydophila pneumoniae CWL029 histone-like protein 2 NP_224584.1 431859 R 115713 CDS NP_224585.1 15618300 894916 complement(432519..434018) 1 NC_000922.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 434018 pepA 894916 pepA Chlamydophila pneumoniae CWL029 leucyl aminopeptidase NP_224585.1 432519 R 115713 CDS NP_224586.1 15618301 894901 complement(434043..434525) 1 NC_000922.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 434525 ssb 894901 ssb Chlamydophila pneumoniae CWL029 single-stranded DNA-binding protein NP_224586.1 434043 R 115713 CDS NP_224587.1 15618302 894874 complement(434696..435196) 1 NC_000922.1 hypothetical protein 435196 894874 CPn0387 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224587.1 434696 R 115713 CDS NP_224588.1 15618303 894889 435329..437323 1 NC_000922.1 glycogen hydrolase 437323 glgX 894889 glgX Chlamydophila pneumoniae CWL029 glycogen hydrolase NP_224588.1 435329 D 115713 CDS NP_224589.1 15618304 894911 complement(437316..438134) 1 NC_000922.1 hypothetical protein 438134 894911 CPn0389 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224589.1 437316 R 115713 CDS NP_224590.1 15618305 894883 complement(438131..439144) 1 NC_000922.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 439144 ruvB 894883 ruvB Chlamydophila pneumoniae CWL029 Holliday junction DNA helicase RuvB NP_224590.1 438131 R 115713 CDS NP_224591.1 15618306 894897 complement(439507..439692) 1 NC_000922.1 hypothetical protein 439692 894897 CPn0391 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224591.1 439507 R 115713 CDS NP_224592.1 15618307 894877 439814..440386 1 NC_000922.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 440386 dcd 894877 dcd Chlamydophila pneumoniae CWL029 deoxycytidine triphosphate deaminase NP_224592.1 439814 D 115713 CDS NP_224593.1 15618308 894875 440379..440726 1 NC_000922.1 hypothetical protein 440726 894875 CPn0393 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224593.1 440379 D 115713 CDS NP_224594.1 15618309 894797 440736..441971 1 NC_000922.1 hemolysin 441971 tlyC_1 894797 tlyC_1 Chlamydophila pneumoniae CWL029 hemolysin NP_224594.1 440736 D 115713 CDS NP_224595.1 15618310 894885 441964..443178 1 NC_000922.1 hypothetical protein 443178 894885 CPn0395 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224595.1 441964 D 115713 CDS NP_224596.1 15618311 894827 complement(443238..444353) 1 NC_000922.1 NifS-like aminotransferase 444353 yhfO 894827 yhfO Chlamydophila pneumoniae CWL029 NifS-like aminotransferase NP_224596.1 443238 R 115713 CDS NP_224597.1 15618312 894879 complement(444378..445115) 1 NC_000922.1 PP2C phosphatase 445115 894879 CPn0397 Chlamydophila pneumoniae CWL029 PP2C phosphatase NP_224597.1 444378 R 115713 CDS NP_224598.1 15618313 894820 445533..445703 1 NC_000922.1 hypothetical protein 445703 894820 CPn0398 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224598.1 445533 D 115713 CDS NP_224599.1 15618314 894871 445879..446526 1 NC_000922.1 hypothetical protein 446526 894871 CPn0399 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224599.1 445879 D 115713 CDS NP_224600.1 15618315 894845 446536..447309 1 NC_000922.1 hypothetical protein 447309 894845 CPn0400 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224600.1 446536 D 115713 CDS NP_224601.1 15618316 894822 complement(447492..447884) 1 NC_000922.1 hypothetical protein 447884 894822 CPn0401 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224601.1 447492 R 115713 CDS NP_224602.1 15618317 895002 complement(447885..448994) 1 NC_000922.1 adenine glycosylase 448994 mutY 895002 mutY Chlamydophila pneumoniae CWL029 adenine glycosylase NP_224602.1 447885 R 115713 CDS NP_224603.1 15618318 895037 449015..449713 1 NC_000922.1 pseudouridine synthase 449713 yceC 895037 yceC Chlamydophila pneumoniae CWL029 pseudouridine synthase NP_224603.1 449015 D 115713 CDS NP_224604.1 15618319 895020 complement(449868..450887) 1 NC_000922.1 hypothetical protein 450887 895020 CPn0404 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224604.1 449868 R 115713 CDS NP_224605.1 15618320 895129 complement(450963..451739) 1 NC_000922.1 hypothetical protein 451739 895129 CPn0405 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224605.1 450963 R 115713 CDS NP_224606.1 15618321 894963 451969..452868 1 NC_000922.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 452868 fabI 894963 fabI Chlamydophila pneumoniae CWL029 enoyl-ACP reductase NP_224606.1 451969 D 115713 CDS NP_224607.1 15618322 895099 complement(452855..453742) 1 NC_000922.1 HAD family phosphatase 453742 895099 CPn0407 Chlamydophila pneumoniae CWL029 HAD family phosphatase NP_224607.1 452855 R 115713 CDS NP_224608.1 15618323 895079 454105..454584 1 NC_000922.1 hypothetical protein 454584 895079 CPn0408 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224608.1 454105 D 115713 CDS NP_224609.1 15618324 895094 454645..455130 1 NC_000922.1 hypothetical protein 455130 895094 CPn0409 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224609.1 454645 D 115713 CDS NP_224610.1 15618325 895030 455123..455836 1 NC_000922.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 455836 dnaQ_1 895030 dnaQ_1 Chlamydophila pneumoniae CWL029 DNA polymerase III subunit epsilon NP_224610.1 455123 D 115713 CDS NP_224611.1 15618326 895133 455833..456612 1 NC_000922.1 hypothetical protein 456612 895133 CPn0411 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224611.1 455833 D 115713 CDS NP_224612.1 15618327 895184 456590..457249 1 NC_000922.1 hypothetical protein 457249 895184 CPn0412 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224612.1 456590 D 115713 CDS NP_224613.1 15618328 895010 complement(457224..459203) 1 NC_000922.1 transport ATP binding protein 459203 msbA 895010 msbA Chlamydophila pneumoniae CWL029 transport ATP binding protein NP_224613.1 457224 R 115713 CDS NP_224614.1 15618329 895203 complement(459169..460143) 1 NC_000922.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 460143 accA 895203 accA Chlamydophila pneumoniae CWL029 acetyl-CoA carboxylase carboxyltransferase subunit alpha NP_224614.1 459169 R 115713 CDS NP_224615.1 15618330 894793 complement(460218..461498) 1 NC_000922.1 hypothetical protein 461498 894793 CPn0415 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224615.1 460218 R 115713 CDS NP_224616.1 15618331 895098 complement(461554..461856) 1 NC_000922.1 integration host factor subunit alpha 461856 himD 895098 himD Chlamydophila pneumoniae CWL029 integration host factor subunit alpha NP_224616.1 461554 R 115713 CDS NP_224617.1 15618332 894909 complement(462241..463035) 1 NC_000922.1 N-acetylmuramoyl alanine amidase 463035 amiA 894909 amiA Chlamydophila pneumoniae CWL029 N-acetylmuramoyl alanine amidase NP_224617.1 462241 R 115713 CDS NP_224618.1 15618333 894904 complement(462950..464401) 1 NC_000922.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 464401 murE 894904 murE Chlamydophila pneumoniae CWL029 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase NP_224618.1 462950 R 115713 CDS NP_224619.1 15618334 895033 complement(464873..466834) 1 NC_000922.1 transglycosylase/transpeptidase 466834 pbp3 895033 pbp3 Chlamydophila pneumoniae CWL029 transglycosylase/transpeptidase NP_224619.1 464873 R 115713 CDS NP_224620.1 15618335 894992 complement(466821..467108) 1 NC_000922.1 hypothetical protein 467108 894992 CPn0420 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224620.1 466821 R 115713 CDS NP_224621.1 15618336 895082 complement(467105..467998) 1 NC_000922.1 S-adenosyl-methyltransferase MraW 467998 mraW 895082 mraW Chlamydophila pneumoniae CWL029 S-adenosyl-methyltransferase MraW NP_224621.1 467105 R 115713 CDS NP_224622.1 15618337 895116 468242..468787 1 NC_000922.1 hypothetical protein 468787 895116 CPn0422 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224622.1 468242 D 115713 CDS NP_224623.1 15618338 895019 468791..469219 1 NC_000922.1 hypothetical protein 469219 895019 CPn0423 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224623.1 468791 D 115713 CDS NP_224624.1 15618339 895183 469612..470964 1 NC_000922.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosome replication initiator DnaA 470964 dnaA 895183 dnaA Chlamydophila pneumoniae CWL029 chromosome replication initiator DnaA NP_224624.1 469612 D 115713 CDS NP_224625.1 15618340 894842 470980..471567 1 NC_000922.1 hypothetical protein 471567 894842 CPn0425 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224625.1 470980 D 115713 CDS NP_224626.1 15618341 894817 complement(471533..472111) 1 NC_000922.1 hypothetical protein 472111 894817 CPn0426 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224626.1 471533 R 115713 CDS NP_224627.1 15618342 895091 472207..473718 1 NC_000922.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 473718 nqr2 895091 nqr2 Chlamydophila pneumoniae CWL029 Na(+)-translocating NADH-quinone reductase subunit B NP_224627.1 472207 D 115713 CDS NP_224628.1 15618343 895055 473722..474684 1 NC_000922.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 474684 nqr3 895055 nqr3 Chlamydophila pneumoniae CWL029 Na(+)-translocating NADH-quinone reductase subunit C NP_224628.1 473722 D 115713 CDS NP_224629.1 15618344 895128 474681..475322 1 NC_000922.1 Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D 475322 nqr4 895128 nqr4 Chlamydophila pneumoniae CWL029 Na(+)-translocating NADH-quinone reductase subunit D NP_224629.1 474681 D 115713 CDS NP_224630.1 15618345 894968 475326..476096 1 NC_000922.1 Na(+)-translocating NADH-quinone reductase subunit E 476096 nqr5 894968 nqr5 Chlamydophila pneumoniae CWL029 Na(+)-translocating NADH-quinone reductase subunit E NP_224630.1 475326 D 115713 CDS NP_224631.1 15618346 894737 complement(476148..476483) 1 NC_000922.1 hypothetical protein 476483 894737 CPn0431 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224631.1 476148 R 115713 CDS NP_224632.1 15618347 894907 complement(476511..476816) 1 NC_000922.1 hypothetical protein 476816 894907 CPn0432 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224632.1 476511 R 115713 CDS NP_224633.1 15618348 894849 complement(476926..477273) 1 NC_000922.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 477273 gcsH 894849 gcsH Chlamydophila pneumoniae CWL029 glycine cleavage system protein H NP_224633.1 476926 R 115713 CDS NP_224634.1 15618349 894998 complement(477273..479462) 1 NC_000922.1 hypothetical protein 479462 894998 CPn0434 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224634.1 477273 R 115713 CDS NP_224635.1 15618350 895058 complement(479472..480902) 1 NC_000922.1 phospholipase D 480902 895058 CPn0435 Chlamydophila pneumoniae CWL029 phospholipase D NP_224635.1 479472 R 115713 CDS NP_224636.1 15618351 894816 complement(480899..481618) 1 NC_000922.1 lipoate protein ligase-like protein 481618 lplA_1 894816 lplA_1 Chlamydophila pneumoniae CWL029 lipoate protein ligase-like protein NP_224636.1 480899 R 115713 CDS NP_224637.1 15618352 895503 481816..484353 1 NC_000922.1 ClpC protease 484353 clpC 895503 clpC Chlamydophila pneumoniae CWL029 ClpC protease NP_224637.1 481816 D 115713 CDS NP_224638.1 15618353 895017 complement(484331..485416) 1 NC_000922.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 485416 mnmA 895017 mnmA Chlamydophila pneumoniae CWL029 tRNA-specific 2-thiouridylase MnmA NP_224638.1 484331 R 115713 CDS NP_224639.1 15618354 894848 485553..486080 1 NC_000922.1 hypothetical protein 486080 894848 CPn0439 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224639.1 485553 D 115713 CDS NP_224640.1 15618355 895551 486105..486743 1 NC_000922.1 hypothetical protein 486743 895551 CPn0440 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224640.1 486105 D 115713 CDS NP_224641.1 15618356 895138 486891..487841 1 NC_000922.1 hypothetical protein 487841 895138 CPn0441 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224641.1 486891 D 115713 CDS NP_224642.1 15618357 894774 488013..488531 1 NC_000922.1 hypothetical protein 488531 894774 CPn0442 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224642.1 488013 D 115713 CDS NP_224643.1 15618358 894892 488729..489982 1 NC_000922.1 hypothetical protein 489982 894892 CPn0443 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224643.1 488729 D 115713 CDS NP_224644.1 15618359 895578 490287..494510 1 NC_000922.1 hypothetical protein 494510 pmp_6 895578 pmp_6 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224644.1 490287 D 115713 CDS NP_224645.1 15618360 895160 494772..497582 1 NC_000922.1 hypothetical protein 497582 pmp_7 895160 pmp_7 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224645.1 494772 D 115713 CDS NP_224646.1 15618361 894653 497626..500418 1 NC_000922.1 hypothetical protein 500418 pmp_8 894653 pmp_8 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224646.1 497626 D 115713 CDS NP_224647.1 15618362 894740 500568..503354 1 NC_000922.1 hypothetical protein 503354 pmp_9 894740 pmp_9 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224647.1 500568 D 115713 CDS NP_224648.1 15618363 895126 complement(503695..504810) 1 NC_000922.1 hypothetical protein 504810 yxjG_2 895126 yxjG_2 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224648.1 503695 R 115713 CDS NP_224649.1 15618364 894690 508275..511061 1 NC_000922.1 hypothetical protein 511061 pmp_11 894690 pmp_11 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224649.1 508275 D 115713 CDS NP_224650.1 15618365 895086 511319..512863 1 NC_000922.1 hypothetical protein 512863 pmp_12 895086 pmp_12 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224650.1 511319 D 115713 CDS NP_224651.1 15618366 895007 513234..516155 1 NC_000922.1 hypothetical protein 516155 pmp_13 895007 pmp_13 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224651.1 513234 D 115713 CDS NP_224652.1 15618367 894924 516182..519118 1 NC_000922.1 hypothetical protein 519118 pmp_14 894924 pmp_14 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224652.1 516182 D 115713 CDS NP_224655.1 15618370 894652 complement(522117..523865) 1 NC_000922.1 hypothetical protein 523865 894652 CPn0457 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224655.1 522117 R 115713 CDS NP_224656.1 15618371 894710 complement(524233..526320) 1 NC_000922.1 hypothetical protein 526320 894710 CPn0458 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224656.1 524233 R 115713 CDS NP_224657.1 15618372 895107 complement(526616..527005) 1 NC_000922.1 hypothetical protein 527005 895107 CPn0459 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224657.1 526616 R 115713 CDS NP_224658.1 15618373 894773 complement(526989..527840) 1 NC_000922.1 hypothetical protein 527840 894773 CPn0460 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224658.1 526989 R 115713 CDS NP_224659.1 15618374 894890 complement(527841..528638) 1 NC_000922.1 hypothetical protein 528638 894890 CPn0461 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224659.1 527841 R 115713 CDS NP_224660.1 15618375 895070 complement(529034..531052) 1 NC_000922.1 hypothetical protein 531052 895070 CPn0462 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224660.1 529034 R 115713 CDS NP_224661.1 15618376 894872 complement(531188..532357) 1 NC_000922.1 hypothetical protein 532357 894872 CPn0463 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224661.1 531188 R 115713 CDS NP_224662.1 15618377 894958 complement(532363..532842) 1 NC_000922.1 hypothetical protein 532842 894958 CPn0464 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224662.1 532363 R 115713 CDS NP_224663.1 15618378 895501 complement(532868..533212) 1 NC_000922.1 hypothetical protein 533212 895501 CPn0465 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224663.1 532868 R 115713 CDS NP_224664.1 15618379 894951 533724..536540 1 NC_000922.1 hypothetical protein 536540 pmp_15 894951 pmp_15 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224664.1 533724 D 115713 CDS NP_224665.1 15618380 894807 536633..539437 1 NC_000922.1 hypothetical protein 539437 pmp_16 894807 pmp_16 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224665.1 536633 D 115713 CDS NP_224667.1 15618382 894859 542564..545404 1 NC_000922.1 hypothetical protein 545404 pmp_18 894859 pmp_18 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224667.1 542564 D 115713 CDS NP_224668.1 15618383 895383 complement(545578..547905) 1 NC_000922.1 hypothetical protein 547905 895383 CPn0472 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224668.1 545578 R 115713 CDS NP_224669.1 15618384 895690 complement(548067..549593) 1 NC_000922.1 hypothetical protein 549593 895690 CPn0473 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224669.1 548067 R 115713 CDS NP_224670.1 15618385 895646 complement(549804..551573) 1 NC_000922.1 hypothetical protein 551573 895646 CPn0474 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224670.1 549804 R 115713 CDS NP_224671.1 15618386 895645 complement(551682..553844) 1 NC_000922.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 553844 glgB 895645 glgB Chlamydophila pneumoniae CWL029 glycogen branching protein NP_224671.1 551682 R 115713 CDS NP_224672.1 15618387 895644 complement(553855..554844) 1 NC_000922.1 hypothetical protein 554844 895644 CPn0476 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224672.1 553855 R 115713 CDS NP_224673.1 15618388 895600 complement(554841..556106) 1 NC_000922.1 hypothetical protein 556106 yqeV 895600 yqeV Chlamydophila pneumoniae CWL029 hypothetical protein NP_224673.1 554841 R 115713 CDS NP_224674.1 15618389 895633 complement(556207..557625) 1 NC_000922.1 GTP binding protein 557625 hflX 895633 hflX Chlamydophila pneumoniae CWL029 GTP binding protein NP_224674.1 556207 R 115713 CDS NP_224675.1 15618390 895664 complement(557613..558425) 1 NC_000922.1 metal dependent hydrolase 558425 phnP 895664 phnP Chlamydophila pneumoniae CWL029 metal dependent hydrolase NP_224675.1 557613 R 115713 CDS NP_224676.1 15618391 895668 complement(558647..559303) 1 NC_000922.1 hypothetical protein 559303 895668 CPn0480 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224676.1 558647 R 115713 CDS NP_224677.1 15618392 895688 complement(559336..560946) 1 NC_000922.1 hypothetical protein 560946 895688 CPn0481 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224677.1 559336 R 115713 CDS NP_224678.1 15618393 895494 complement(560958..561737) 1 NC_000922.1 arginine periplasmic binding protein 561737 artJ 895494 artJ Chlamydophila pneumoniae CWL029 arginine periplasmic binding protein NP_224678.1 560958 R 115713 CDS NP_224679.1 15618394 895493 561836..564967 1 NC_000922.1 hypothetical protein 564967 895493 CPn0483 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224679.1 561836 D 115713 CDS NP_224680.1 15618395 895692 564970..565827 1 NC_000922.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase 565827 aroG 895692 aroG Chlamydophila pneumoniae CWL029 3-deoxy-7-phosphoheptulonate synthase NP_224680.1 564970 D 115713 CDS NP_224681.1 15618396 895495 566038..566232 1 NC_000922.1 hypothetical protein 566232 895495 CPn0485 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224681.1 566038 D 115713 CDS NP_224682.1 15618397 895220 complement(566402..567784) 1 NC_000922.1 proline permease 567784 895220 CPn0486 Chlamydophila pneumoniae CWL029 proline permease NP_224682.1 566402 R 115713 CDS NP_224683.1 15618398 895301 complement(568109..569740) 1 NC_000922.1 hypothetical protein 569740 895301 CPn0487 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224683.1 568109 R 115713 CDS NP_224684.1 15618399 895284 complement(569764..570096) 1 NC_000922.1 HIT family hydrolase 570096 ycfF 895284 ycfF Chlamydophila pneumoniae CWL029 HIT family hydrolase NP_224684.1 569764 R 115713 CDS NP_224685.1 15618400 895221 complement(570093..570965) 1 NC_000922.1 hypothetical protein 570965 895221 CPn0489 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224685.1 570093 R 115713 CDS NP_224686.1 15618401 895219 571279..573336 1 NC_000922.1 hypothetical protein 573336 895219 CPn0490 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224686.1 571279 D 115713 CDS NP_224687.1 15618402 895285 complement(573333..574352) 1 NC_000922.1 hypothetical protein 574352 895285 CPn0491 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224687.1 573333 R 115713 CDS NP_224688.1 15618403 895114 574652..574807 1 NC_000922.1 hypothetical protein 574807 895114 CPn0492 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224688.1 574652 D 115713 CDS NP_224689.1 15618404 895222 complement(574852..575004) 1 NC_000922.1 hypothetical protein 575004 895222 CPn0493 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224689.1 574852 R 115713 CDS NP_224690.1 15618405 895447 complement(575143..575364) 1 NC_000922.1 hypothetical protein 575364 895447 CPn0494 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224690.1 575143 R 115713 CDS NP_224691.1 15618406 895445 575603..576796 1 NC_000922.1 catalyzes the interconversion of tetrahydrodipicolinate and L,L-diaminopimelate in lysine biosynthesis; L,L-diaminopimelate aminotransferase 576796 aspC 895445 aspC Chlamydophila pneumoniae CWL029 L,L-diaminopimelate aminotransferase NP_224691.1 575603 D 115713 CDS NP_224692.1 15618407 895446 576793..577815 1 NC_000922.1 hypothetical protein 577815 895446 CPn0496 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224692.1 576793 D 115713 CDS NP_224693.1 15618408 895691 complement(577817..578089) 1 NC_000922.1 hypothetical protein 578089 895691 CPn0497 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224693.1 577817 R 115713 CDS NP_224694.1 15618409 895444 complement(578082..579035) 1 NC_000922.1 hypothetical protein 579035 895444 CPn0498 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224694.1 578082 R 115713 CDS NP_224695.1 15618410 895443 complement(579202..580359) 1 NC_000922.1 hypothetical protein 580359 895443 CPn0499 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224695.1 579202 R 115713 CDS NP_224696.1 15618411 895393 580659..582365 1 NC_000922.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 582365 proS 895393 proS Chlamydophila pneumoniae CWL029 prolyl-tRNA synthetase NP_224696.1 580659 D 115713 CDS NP_224697.1 15618412 894870 582457..583653 1 NC_000922.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 583653 hrcA 894870 hrcA Chlamydophila pneumoniae CWL029 heat-inducible transcription repressor NP_224697.1 582457 D 115713 CDS NP_224698.1 15618413 895327 583650..584204 1 NC_000922.1 HSP-70 cofactor 584204 grpE 895327 grpE Chlamydophila pneumoniae CWL029 HSP-70 cofactor NP_224698.1 583650 D 115713 CDS NP_224699.1 15618414 894942 584234..586216 1 NC_000922.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 586216 dnaK 894942 dnaK Chlamydophila pneumoniae CWL029 molecular chaperone DnaK NP_224699.1 584234 D 115713 CDS NP_224700.1 15618415 895326 586487..588517 1 NC_000922.1 ribonuclease 588517 vacB 895326 vacB Chlamydophila pneumoniae CWL029 ribonuclease NP_224700.1 586487 D 115713 CDS NP_224701.1 15618416 895324 588519..589109 1 NC_000922.1 3-methyladenine DNA glycosylase 589109 895324 CPn0505 Chlamydophila pneumoniae CWL029 3-methyladenine DNA glycosylase NP_224701.1 588519 D 115713 CDS NP_224702.1 15618417 895325 589172..589843 1 NC_000922.1 hypothetical protein 589843 895325 CPn0506 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224702.1 589172 D 115713 CDS NP_224703.1 15618418 895442 589961..590125 1 NC_000922.1 hypothetical protein 590125 895442 CPn0507 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224703.1 589961 D 115713 CDS NP_224704.1 15618419 895488 590142..590303 1 NC_000922.1 hypothetical protein 590303 895488 CPn0508 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224704.1 590142 D 115713 CDS NP_224705.1 15618420 895349 590335..590811 1 NC_000922.1 metalloprotein 590811 895349 CPn0509 Chlamydophila pneumoniae CWL029 metalloprotein NP_224705.1 590335 D 115713 CDS NP_224706.1 15618421 895392 590813..591976 1 NC_000922.1 hemolysin 591976 tlyC_2 895392 tlyC_2 Chlamydophila pneumoniae CWL029 hemolysin NP_224706.1 590813 D 115713 CDS NP_224707.1 15618422 894861 592141..592491 1 NC_000922.1 sigma regulatory factor 592491 rsbV_1 894861 rsbV_1 Chlamydophila pneumoniae CWL029 sigma regulatory factor NP_224707.1 592141 D 115713 CDS NP_224708.1 15618423 894858 592553..594415 1 NC_000922.1 hypothetical protein 594415 894858 CPn0512 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224708.1 592553 D 115713 CDS NP_224709.1 15618424 895654 594647..595756 1 NC_000922.1 hypothetical protein 595756 895654 CPn0513 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224709.1 594647 D 115713 CDS NP_224710.1 15618425 895365 595729..596523 1 NC_000922.1 hypothetical protein 596523 895365 CPn0514 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224710.1 595729 D 115713 CDS NP_224711.2 161353777 895348 596471..597184 1 NC_000922.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 597184 ubiE 895348 ubiE Chlamydophila pneumoniae CWL029 ubiquinone/menaquinone biosynthesis methyltransferase NP_224711.2 596471 D 115713 CDS NP_224712.1 15618427 895487 complement(597252..598814) 1 NC_000922.1 hypothetical protein 598814 895487 CPn0516 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224712.1 597252 R 115713 CDS NP_224713.1 15618428 895300 complement(598792..599631) 1 NC_000922.1 hypothetical protein 599631 895300 CPn0517 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224713.1 598792 R 115713 CDS NP_224714.1 15618429 895364 complement(599829..600803) 1 NC_000922.1 hypothetical protein 600803 895364 CPn0518 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224714.1 599829 R 115713 CDS NP_224715.1 15618430 895298 complement(600901..601674) 1 NC_000922.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 601674 dapF 895298 dapF Chlamydophila pneumoniae CWL029 diaminopimelate epimerase NP_224715.1 600901 R 115713 CDS NP_224716.1 15618431 895481 complement(601643..602218) 1 NC_000922.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 602218 clpP_1 895481 clpP_1 Chlamydophila pneumoniae CWL029 ATP-dependent Clp protease proteolytic subunit NP_224716.1 601643 R 115713 CDS NP_224717.1 15618432 895462 complement(602238..603797) 1 NC_000922.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 603797 glyA 895462 glyA Chlamydophila pneumoniae CWL029 serine hydroxymethyltransferase NP_224717.1 602238 R 115713 CDS NP_224718.1 15618433 895480 603987..604658 1 NC_000922.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 604658 hemD 895480 hemD Chlamydophila pneumoniae CWL029 uroporphyrinogen-III synthase NP_224718.1 603987 D 115713 CDS NP_224719.1 15618434 895463 604723..605055 1 NC_000922.1 hypothetical protein 605055 895463 CPn0523 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224719.1 604723 D 115713 CDS NP_224720.1 15618435 895461 605103..606182 1 NC_000922.1 hypothetical protein 606182 895461 CPn0524 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224720.1 605103 D 115713 CDS NP_224721.1 15618436 895419 606522..607286 1 NC_000922.1 hypothetical protein 607286 895419 CPn0525 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224721.1 606522 D 115713 CDS NP_224722.1 15618437 895418 complement(607707..608696) 1 NC_000922.1 GutQ/KpsF family sugar-P isomerase 608696 kpsF 895418 kpsF Chlamydophila pneumoniae CWL029 GutQ/KpsF family sugar-P isomerase NP_224722.1 607707 R 115713 CDS NP_224723.1 15618438 895408 complement(608723..609904) 1 NC_000922.1 Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA; branched-chain alpha-keto acid dehydrogenase subunit E2 609904 sucB_2 895408 sucB_2 Chlamydophila pneumoniae CWL029 branched-chain alpha-keto acid dehydrogenase subunit E2 NP_224723.1 608723 R 115713 CDS NP_224724.1 15618439 895407 complement(609918..611162) 1 NC_000922.1 glutamate symporter 611162 gltT 895407 gltT Chlamydophila pneumoniae CWL029 glutamate symporter NP_224724.1 609918 R 115713 CDS NP_224725.1 15618440 895386 complement(611162..612259) 1 NC_000922.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 612259 lpxK 895386 lpxK Chlamydophila pneumoniae CWL029 tetraacyldisaccharide 4'-kinase NP_224725.1 611162 R 115713 CDS NP_224726.1 15618441 895385 complement(612457..613254) 1 NC_000922.1 rRNA methylase 613254 spoU_1 895385 spoU_1 Chlamydophila pneumoniae CWL029 rRNA methylase NP_224726.1 612457 R 115713 CDS NP_224727.1 15618442 895318 complement(613242..614069) 1 NC_000922.1 SAM-dependent methyltransferase 614069 895318 CPn0531 Chlamydophila pneumoniae CWL029 SAM-dependent methyltransferase NP_224727.1 613242 R 115713 CDS NP_224728.1 15618443 895387 complement(614072..614674) 1 NC_000922.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 614674 ribC 895387 ribC Chlamydophila pneumoniae CWL029 riboflavin synthase subunit alpha NP_224728.1 614072 R 115713 CDS NP_224729.1 15618444 895292 614930..615388 1 NC_000922.1 NrdR family transcriptional regulator 615388 nrdR 895292 nrdR Chlamydophila pneumoniae CWL029 NrdR family transcriptional regulator NP_224729.1 614930 D 115713 CDS NP_224730.1 15618445 895299 615413..615787 1 NC_000922.1 DnaK suppressor 615787 dksA 895299 dksA Chlamydophila pneumoniae CWL029 DnaK suppressor NP_224730.1 615413 D 115713 CDS NP_224731.1 15618446 895384 615793..616299 1 NC_000922.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 616299 lspA 895384 lspA Chlamydophila pneumoniae CWL029 lipoprotein signal peptidase NP_224731.1 615793 D 115713 CDS NP_224732.1 15618447 895266 616345..617694 1 NC_000922.1 D-Ala/Gly permease 617694 dagA_1 895266 dagA_1 Chlamydophila pneumoniae CWL029 D-Ala/Gly permease NP_224732.1 616345 D 115713 CDS NP_224733.1 15618448 895262 617833..618192 1 NC_000922.1 hypothetical protein 618192 895262 CPn0537 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224733.1 617833 D 115713 CDS NP_224734.1 15618449 895264 618212..618514 1 NC_000922.1 hypothetical protein 618514 895264 CPn0538 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224734.1 618212 D 115713 CDS NP_224735.1 15618450 895263 618705..621548 1 NC_000922.1 hypothetical protein 621548 pmp_19 895263 pmp_19 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224735.1 618705 D 115713 CDS NP_224736.1 15618451 895491 621694..626865 1 NC_000922.1 hypothetical protein 626865 pmp_20 895491 pmp_20 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224736.1 621694 D 115713 CDS NP_224737.1 15618452 895486 627170..628006 1 NC_000922.1 solute-binding protein 628006 895486 CPn0541 Chlamydophila pneumoniae CWL029 solute-binding protein NP_224737.1 627170 D 115713 CDS NP_224738.1 15618453 895485 628003..628740 1 NC_000922.1 ABC transporter ATPase 628740 895485 CPn0542 Chlamydophila pneumoniae CWL029 ABC transporter ATPase NP_224738.1 628003 D 115713 CDS NP_224739.1 15618454 895265 628725..629606 1 NC_000922.1 metal transport protein 629606 895265 CPn0543 Chlamydophila pneumoniae CWL029 metal transport protein NP_224739.1 628725 D 115713 CDS NP_224740.1 15618455 895479 complement(629522..630529) 1 NC_000922.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 630529 obgE 895479 obgE Chlamydophila pneumoniae CWL029 GTPase ObgE NP_224740.1 629522 R 115713 CDS NP_224741.1 15618456 895484 complement(630630..630884) 1 NC_000922.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 630884 rpmA 895484 rpmA Chlamydophila pneumoniae CWL029 50S ribosomal protein L27 NP_224741.1 630630 R 115713 CDS NP_224742.1 15618457 895453 complement(630909..631229) 1 NC_000922.1 50S ribosomal protein L21 631229 rplU 895453 rplU Chlamydophila pneumoniae CWL029 50S ribosomal protein L21 NP_224742.1 630909 R 115713 CDS NP_224743.1 15618458 895434 631661..632191 1 NC_000922.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 632191 ispF 895434 ispF Chlamydophila pneumoniae CWL029 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase NP_224743.1 631661 D 115713 CDS NP_224744.1 15618459 895319 complement(632188..633231) 1 NC_000922.1 sulfite reductase 633231 cysJ 895319 cysJ Chlamydophila pneumoniae CWL029 sulfite reductase NP_224744.1 632188 R 115713 CDS NP_224745.1 15618460 895435 complement(633252..633569) 1 NC_000922.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 633569 rpsJ 895435 rpsJ Chlamydophila pneumoniae CWL029 30S ribosomal protein S10 NP_224745.1 633252 R 115713 CDS NP_224746.1 15618461 895425 complement(633577..635661) 1 NC_000922.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 635661 fusA 895425 fusA Chlamydophila pneumoniae CWL029 elongation factor G NP_224746.1 633577 R 115713 CDS NP_224747.1 15618462 895452 complement(635695..636168) 1 NC_000922.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 636168 rs7 895452 rs7 Chlamydophila pneumoniae CWL029 30S ribosomal protein S7 NP_224747.1 635695 R 115713 CDS NP_224748.1 15618463 895436 complement(636216..636587) 1 NC_000922.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 636587 rpsL 895436 rpsL Chlamydophila pneumoniae CWL029 30S ribosomal protein S12 NP_224748.1 636216 R 115713 CDS NP_224749.1 15618464 895412 complement(636809..637747) 1 NC_000922.1 hypothetical protein 637747 895412 CPn0553 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224749.1 636809 R 115713 CDS NP_224750.1 15618465 895424 637854..638144 1 NC_000922.1 hypothetical protein 638144 895424 CPn0554 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224750.1 637854 D 115713 CDS NP_224751.1 15618466 895414 638298..640244 1 NC_000922.1 tail-specific protease 640244 tsp 895414 tsp Chlamydophila pneumoniae CWL029 tail-specific protease NP_224751.1 638298 D 115713 CDS NP_224752.1 15618467 895413 complement(640322..640912) 1 NC_000922.1 hypothetical protein 640912 crpA 895413 crpA Chlamydophila pneumoniae CWL029 hypothetical protein NP_224752.1 640322 R 115713 CDS NP_224753.1 15618468 895362 complement(641191..642861) 1 NC_000922.1 hypothetical protein 642861 omcB 895362 omcB Chlamydophila pneumoniae CWL029 hypothetical protein NP_224753.1 641191 R 115713 CDS NP_224754.1 15618469 895361 complement(643028..643300) 1 NC_000922.1 hypothetical protein 643300 omcA 895361 omcA Chlamydophila pneumoniae CWL029 hypothetical protein NP_224754.1 643028 R 115713 CDS NP_224755.1 15618470 895360 643742..643930 1 NC_000922.1 hypothetical protein 643930 895360 CPn0559 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224755.1 643742 D 115713 CDS NP_224756.1 15618471 895358 complement(644095..645612) 1 NC_000922.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 645612 gltX 895358 gltX Chlamydophila pneumoniae CWL029 glutamyl-tRNA synthetase NP_224756.1 644095 R 115713 CDS NP_224757.1 15618472 895357 complement(645868..646404) 1 NC_000922.1 hypothetical protein 646404 euo 895357 euo Chlamydophila pneumoniae CWL029 hypothetical protein NP_224757.1 645868 R 115713 CDS NP_224758.1 15618473 895356 complement(646915..648036) 1 NC_000922.1 hypothetical protein 648036 895356 CPn0562 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224758.1 646915 R 115713 CDS NP_224759.1 15618474 895355 complement(648290..650056) 1 NC_000922.1 ssDNA exonuclease RecJ 650056 recJ 895355 recJ Chlamydophila pneumoniae CWL029 ssDNA exonuclease RecJ NP_224759.1 648290 R 115713 CDS NP_224760.1 15618475 895347 complement(650142..654350) 1 NC_000922.1 part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; in these organisms there is an unknown N-terminal domain; preprotein translocase subunits SecD/SecF 654350 secD/secF 895347 secD/secF Chlamydophila pneumoniae CWL029 preprotein translocase subunits SecD/SecF NP_224760.1 650142 R 115713 CDS NP_224761.1 15618476 895346 complement(654530..655630) 1 NC_000922.1 hypothetical protein 655630 895346 CPn0565 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224761.1 654530 R 115713 CDS NP_224762.1 15618477 895338 656141..656893 1 NC_000922.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; UDP pyrophosphate synthase 656893 yaeS 895338 yaeS Chlamydophila pneumoniae CWL029 UDP pyrophosphate synthase NP_224762.1 656141 D 115713 CDS NP_224763.1 15618478 895339 656894..657820 1 NC_000922.1 phosphatidate cytidylyltransferase 657820 cdsA 895339 cdsA Chlamydophila pneumoniae CWL029 phosphatidate cytidylyltransferase NP_224763.1 656894 D 115713 CDS NP_224764.1 15618479 895337 657817..658467 1 NC_000922.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 658467 cmk 895337 cmk Chlamydophila pneumoniae CWL029 cytidylate kinase NP_224764.1 657817 D 115713 CDS NP_224765.1 15618480 895321 658464..659102 1 NC_000922.1 glycerol-3-P acyltransferase 659102 plsC 895321 plsC Chlamydophila pneumoniae CWL029 glycerol-3-P acyltransferase NP_224765.1 658464 D 115713 CDS NP_224766.1 15618481 895322 659107..660792 1 NC_000922.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 660792 argS 895322 argS Chlamydophila pneumoniae CWL029 arginyl-tRNA synthetase NP_224766.1 659107 D 115713 CDS NP_224767.1 15618482 895311 complement(660746..662122) 1 NC_000922.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 662122 murA 895311 murA Chlamydophila pneumoniae CWL029 UDP-N-acetylglucosamine 1-carboxyvinyltransferase NP_224767.1 660746 R 115713 CDS NP_224768.1 15618483 895313 662352..664619 1 NC_000922.1 hypothetical protein 664619 895313 CPn0572 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224768.1 662352 D 115713 CDS NP_224769.1 15618484 895275 complement(664688..665404) 1 NC_000922.1 hypothetical protein 665404 yebC 895275 yebC Chlamydophila pneumoniae CWL029 hypothetical protein NP_224769.1 664688 R 115713 CDS NP_224770.1 15618485 895454 complement(665391..665945) 1 NC_000922.1 hypothetical protein 665945 895454 CPn0574 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224770.1 665391 R 115713 CDS NP_224771.1 15618486 895258 complement(665979..666494) 1 NC_000922.1 amino group Acetyl transferase 666494 yhhY 895258 yhhY Chlamydophila pneumoniae CWL029 amino group Acetyl transferase NP_224771.1 665979 R 115713 CDS NP_224772.1 15618982 894762 complement(join(666491..667531,667530..667598)) 1 NC_000922.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 667598 prfB 894762 prfB Chlamydophila pneumoniae CWL029 peptide chain release factor 2 NP_224772.1 666491 R 115713 CDS NP_224773.1 15618487 895259 667895..668158 1 NC_000922.1 SWIB (YM74) complex protein 668158 895259 CPn0577 Chlamydophila pneumoniae CWL029 SWIB (YM74) complex protein NP_224773.1 667895 D 115713 CDS NP_224774.1 15618488 895257 668406..669368 1 NC_000922.1 phosphohydrolase 669368 yaeI 895257 yaeI Chlamydophila pneumoniae CWL029 phosphohydrolase NP_224774.1 668406 D 115713 CDS NP_224775.1 15618489 895471 669361..669996 1 NC_000922.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 669996 ispD 895471 ispD Chlamydophila pneumoniae CWL029 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NP_224775.1 669361 D 115713 CDS NP_224776.1 15618490 895457 669993..670796 1 NC_000922.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 670796 truA 895457 truA Chlamydophila pneumoniae CWL029 tRNA pseudouridine synthase A NP_224776.1 669993 D 115713 CDS NP_224777.1 15618491 895456 complement(670742..671434) 1 NC_000922.1 phosphoglycolate phosphatase 671434 895456 CPn0581 Chlamydophila pneumoniae CWL029 phosphoglycolate phosphatase NP_224777.1 670742 R 115713 CDS NP_224778.1 15618492 895312 671503..672180 1 NC_000922.1 hypothetical protein 672180 895312 CPn0582 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224778.1 671503 D 115713 CDS NP_224779.1 15618493 895451 672400..672720 1 NC_000922.1 hypothetical protein 672720 895451 CPn0583 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224779.1 672400 D 115713 CDS NP_224780.1 15618494 895448 672707..673801 1 NC_000922.1 two component sensor protein 673801 atoS 895448 atoS Chlamydophila pneumoniae CWL029 two component sensor protein NP_224780.1 672707 D 115713 CDS NP_224781.1 15618495 895455 complement(673862..675817) 1 NC_000922.1 hypothetical protein 675817 895455 CPn0585 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224781.1 673862 R 115713 CDS NP_224782.1 15618496 895473 676026..677186 1 NC_000922.1 two component regulator 677186 atoC 895473 atoC Chlamydophila pneumoniae CWL029 two component regulator NP_224782.1 676026 D 115713 CDS NP_224783.1 15618497 895367 677441..678127 1 NC_000922.1 hypothetical protein 678127 yvyD 895367 yvyD Chlamydophila pneumoniae CWL029 hypothetical protein NP_224783.1 677441 D 115713 CDS NP_224784.1 15618498 895450 678084..678629 1 NC_000922.1 hypothetical protein 678629 895450 CPn0588 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224784.1 678084 D 115713 CDS NP_224785.1 15618499 895380 678640..679398 1 NC_000922.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 679398 recO 895380 recO Chlamydophila pneumoniae CWL029 DNA repair protein RecO NP_224785.1 678640 D 115713 CDS NP_224786.1 15618500 895368 complement(679513..680112) 1 NC_000922.1 hypothetical protein 680112 895368 CPn0590 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224786.1 679513 R 115713 CDS NP_224787.1 15618501 895359 680373..681023 1 NC_000922.1 YagE family protein 681023 yagE 895359 yagE Chlamydophila pneumoniae CWL029 YagE family protein NP_224787.1 680373 D 115713 CDS NP_224788.1 15618502 895330 681153..681464 1 NC_000922.1 hypothetical protein 681464 yidD 895330 yidD Chlamydophila pneumoniae CWL029 hypothetical protein NP_224788.1 681153 D 115713 CDS NP_224789.1 15618503 895379 complement(681388..682476) 1 NC_000922.1 hypothetical protein 682476 895379 CPn0593 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224789.1 681388 R 115713 CDS NP_224790.1 15618504 895331 682583..684961 1 NC_000922.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 684961 pheT 895331 pheT Chlamydophila pneumoniae CWL029 phenylalanyl-tRNA synthetase subunit beta NP_224790.1 682583 D 115713 CDS NP_224791.1 15618505 895333 684958..685929 1 NC_000922.1 hypothetical protein 685929 895333 CPn0595 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224791.1 684958 D 115713 CDS NP_224792.1 15618506 895307 685939..686460 1 NC_000922.1 methyltransferase 686460 ada 895307 ada Chlamydophila pneumoniae CWL029 methyltransferase NP_224792.1 685939 D 115713 CDS NP_224793.1 15618507 895309 complement(686476..688215) 1 NC_000922.1 oligopeptide permease 688215 oppC_2 895309 oppC_2 Chlamydophila pneumoniae CWL029 oligopeptide permease NP_224793.1 686476 R 115713 CDS NP_224794.1 15618508 895308 complement(688216..689697) 1 NC_000922.1 oligopeptide permease 689697 oppB_2 895308 oppB_2 Chlamydophila pneumoniae CWL029 oligopeptide permease NP_224794.1 688216 R 115713 CDS NP_224795.1 15618509 895277 complement(689679..691802) 1 NC_000922.1 oligopeptide binding lipoprotein 691802 oppA_5 895277 oppA_5 Chlamydophila pneumoniae CWL029 oligopeptide binding lipoprotein NP_224795.1 689679 R 115713 CDS NP_224796.1 15618510 895276 complement(691824..692147) 1 NC_000922.1 hypothetical protein 692147 895276 CPn0600 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224796.1 691824 R 115713 CDS NP_224797.1 15618511 895244 complement(692733..693053) 1 NC_000922.1 hypothetical protein 693053 895244 CPn0601 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224797.1 692733 R 115713 CDS NP_224798.1 15618512 895243 complement(693101..694105) 1 NC_000922.1 hypothetical protein 694105 895243 CPn0602 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224798.1 693101 R 115713 CDS NP_224799.1 15618513 895242 694205..695188 1 NC_000922.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 695188 hemH 895242 hemH Chlamydophila pneumoniae CWL029 ferrochelatase NP_224799.1 694205 D 115713 CDS NP_224800.1 15618514 895236 complement(695193..695945) 1 NC_000922.1 glutamine-binding protein 695945 fliY 895236 fliY Chlamydophila pneumoniae CWL029 glutamine-binding protein NP_224800.1 695193 R 115713 CDS NP_224801.1 15618515 895235 complement(696147..696707) 1 NC_000922.1 methylase 696707 yhhF 895235 yhhF Chlamydophila pneumoniae CWL029 methylase NP_224801.1 696147 R 115713 CDS NP_224802.1 15618516 895234 complement(696704..697444) 1 NC_000922.1 hypothetical protein 697444 895234 CPn0606 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224802.1 696704 R 115713 CDS NP_224803.1 15618517 895476 complement(697570..698895) 1 NC_000922.1 glucose-1-phosphate adenylyltransferase 698895 glgC 895476 glgC Chlamydophila pneumoniae CWL029 glucose-1-phosphate adenylyltransferase NP_224803.1 697570 R 115713 CDS NP_224804.1 15618518 895475 complement(699013..699645) 1 NC_000922.1 catalyzes the formation of orotidine monophosphate from 5-phosphoribosyl-1-pyrophosphate and orotate; orotate phosphoribosyltransferase 699645 895475 CPn0608 Chlamydophila pneumoniae CWL029 orotate phosphoribosyltransferase NP_224804.1 699013 R 115713 CDS NP_224805.1 15618519 895470 699705..699989 1 NC_000922.1 hypothetical protein 699989 895470 CPn0609 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224805.1 699705 D 115713 CDS NP_224806.1 15618520 895466 complement(700026..701420) 1 NC_000922.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 701420 rho 895466 rho Chlamydophila pneumoniae CWL029 transcription termination factor Rho NP_224806.1 700026 R 115713 CDS NP_224807.1 15618521 895469 complement(701417..702025) 1 NC_000922.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 702025 coaE 895469 coaE Chlamydophila pneumoniae CWL029 dephospho-CoA kinase NP_224807.1 701417 R 115713 CDS NP_224808.1 15618522 895332 complement(702019..704631) 1 NC_000922.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 704631 polA 895332 polA Chlamydophila pneumoniae CWL029 DNA polymerase I NP_224808.1 702019 R 115713 CDS NP_224809.1 15618523 895467 complement(704655..705656) 1 NC_000922.1 protease 705656 sohB 895467 sohB Chlamydophila pneumoniae CWL029 protease NP_224809.1 704655 R 115713 CDS NP_224810.1 15618524 895433 complement(705780..707402) 1 NC_000922.1 ADP/ATP translocase 707402 adt_2 895433 adt_2 Chlamydophila pneumoniae CWL029 ADP/ATP translocase NP_224810.1 705780 R 115713 CDS NP_224811.1 15618525 895432 complement(707631..708137) 1 NC_000922.1 glycerol-3-P phosphatidyltransferase 708137 pgsA_1 895432 pgsA_1 Chlamydophila pneumoniae CWL029 glycerol-3-P phosphatidyltransferase NP_224811.1 707631 R 115713 CDS NP_224812.1 15618526 895465 708791..710140 1 NC_000922.1 unwinds double stranded DNA; replicative DNA helicase 710140 dnaB 895465 dnaB Chlamydophila pneumoniae CWL029 replicative DNA helicase NP_224812.1 708791 D 115713 CDS NP_224813.1 15618527 895416 710484..712319 1 NC_000922.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 712319 gidA 895416 gidA Chlamydophila pneumoniae CWL029 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA NP_224813.1 710484 D 115713 CDS NP_224814.1 15618528 895415 712306..713013 1 NC_000922.1 lipoate-protein ligase A 713013 lplA_2 895415 lplA_2 Chlamydophila pneumoniae CWL029 lipoate-protein ligase A NP_224814.1 712306 D 115713 CDS NP_224815.1 15618529 895417 complement(713010..713444) 1 NC_000922.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 713444 ndk 895417 ndk Chlamydophila pneumoniae CWL029 nucleoside diphosphate kinase NP_224815.1 713010 R 115713 CDS NP_224816.1 15618530 895411 complement(713516..714139) 1 NC_000922.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 714139 ruvA 895411 ruvA Chlamydophila pneumoniae CWL029 Holliday junction DNA helicase RuvA NP_224816.1 713516 R 115713 CDS NP_224817.1 15618531 895409 complement(714141..714647) 1 NC_000922.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 714647 ruvC 895409 ruvC Chlamydophila pneumoniae CWL029 Holliday junction resolvase NP_224817.1 714141 R 115713 CDS NP_224818.1 15618532 895410 complement(714790..715752) 1 NC_000922.1 hypothetical protein 715752 895410 CPn0622 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224818.1 714790 R 115713 CDS NP_224819.1 15618533 895405 complement(716160..716993) 1 NC_000922.1 hypothetical protein 716993 895405 CPn0623 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224819.1 716160 R 115713 CDS NP_224820.1 15618534 895404 complement(717008..718015) 1 NC_000922.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase 718015 gapA 895404 gapA Chlamydophila pneumoniae CWL029 glyceraldehyde-3-phosphate dehydrogenase NP_224820.1 717008 R 115713 CDS NP_224821.1 15618535 895406 complement(718057..718485) 1 NC_000922.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 718485 rplQ 895406 rplQ Chlamydophila pneumoniae CWL029 50S ribosomal protein L17 NP_224821.1 718057 R 115713 CDS NP_224822.1 15618536 895399 complement(718492..719616) 1 NC_000922.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 719616 rpoA 895399 rpoA Chlamydophila pneumoniae CWL029 DNA-directed RNA polymerase subunit alpha NP_224822.1 718492 R 115713 CDS NP_224823.1 15618537 895398 complement(719637..720038) 1 NC_000922.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 720038 rs11 895398 rs11 Chlamydophila pneumoniae CWL029 30S ribosomal protein S11 NP_224823.1 719637 R 115713 CDS NP_224824.1 15618538 895390 complement(720060..720428) 1 NC_000922.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 720428 rpsM 895390 rpsM Chlamydophila pneumoniae CWL029 30S ribosomal protein S13 NP_224824.1 720060 R 115713 CDS NP_224825.1 15618539 895464 complement(720484..721857) 1 NC_000922.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 721857 secY 895464 secY Chlamydophila pneumoniae CWL029 preprotein translocase subunit SecY NP_224825.1 720484 R 115713 CDS NP_224826.1 15618540 895389 complement(721882..722316) 1 NC_000922.1 late assembly protein; 50S ribosomal protein L15 722316 rplO 895389 rplO Chlamydophila pneumoniae CWL029 50S ribosomal protein L15 NP_224826.1 721882 R 115713 CDS NP_224827.1 15618541 895381 complement(722309..722806) 1 NC_000922.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 722806 rpsE 895381 rpsE Chlamydophila pneumoniae CWL029 30S ribosomal protein S5 NP_224827.1 722309 R 115713 CDS NP_224828.1 15618542 895391 complement(722824..723195) 1 NC_000922.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 723195 rplR 895391 rplR Chlamydophila pneumoniae CWL029 50S ribosomal protein L18 NP_224828.1 722824 R 115713 CDS NP_224829.1 15618543 895377 complement(723206..723757) 1 NC_000922.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 723757 rplF 895377 rplF Chlamydophila pneumoniae CWL029 50S ribosomal protein L6 NP_224829.1 723206 R 115713 CDS NP_224830.1 15618544 895376 complement(723784..724185) 1 NC_000922.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 724185 rpsH 895376 rpsH Chlamydophila pneumoniae CWL029 30S ribosomal protein S8 NP_224830.1 723784 R 115713 CDS NP_224831.1 15618545 895378 complement(724203..724745) 1 NC_000922.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 724745 rplE 895378 rplE Chlamydophila pneumoniae CWL029 50S ribosomal protein L5 NP_224831.1 724203 R 115713 CDS NP_224832.1 15618546 895353 complement(724747..725082) 1 NC_000922.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 725082 rplX 895353 rplX Chlamydophila pneumoniae CWL029 50S ribosomal protein L24 NP_224832.1 724747 R 115713 CDS NP_224833.1 15618547 895382 complement(725096..725464) 1 NC_000922.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 725464 rplN 895382 rplN Chlamydophila pneumoniae CWL029 50S ribosomal protein L14 NP_224833.1 725096 R 115713 CDS NP_224834.1 15618548 895352 complement(725487..725747) 1 NC_000922.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 725747 rpsQ 895352 rpsQ Chlamydophila pneumoniae CWL029 30S ribosomal protein S17 NP_224834.1 725487 R 115713 CDS NP_224835.1 15618549 895351 complement(725740..725958) 1 NC_000922.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 725958 rpmC 895351 rpmC Chlamydophila pneumoniae CWL029 50S ribosomal protein L29 NP_224835.1 725740 R 115713 CDS NP_224836.1 15618550 895334 complement(725961..726377) 1 NC_000922.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 726377 rplP 895334 rplP Chlamydophila pneumoniae CWL029 50S ribosomal protein L16 NP_224836.1 725961 R 115713 CDS NP_224837.1 15618551 895354 complement(726406..727077) 1 NC_000922.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 727077 rpsC 895354 rpsC Chlamydophila pneumoniae CWL029 30S ribosomal protein S3 NP_224837.1 726406 R 115713 CDS NP_224838.1 15618552 895336 complement(727093..727428) 1 NC_000922.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 727428 rplV 895336 rplV Chlamydophila pneumoniae CWL029 50S ribosomal protein L22 NP_224838.1 727093 R 115713 CDS NP_224839.1 15618553 895350 complement(727447..727713) 1 NC_000922.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 727713 rpsS 895350 rpsS Chlamydophila pneumoniae CWL029 30S ribosomal protein S19 NP_224839.1 727447 R 115713 CDS NP_224840.1 15618554 895335 complement(727719..728573) 1 NC_000922.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 728573 rplB 895335 rplB Chlamydophila pneumoniae CWL029 50S ribosomal protein L2 NP_224840.1 727719 R 115713 CDS NP_224841.1 15618555 895316 complement(728595..728930) 1 NC_000922.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 728930 rplW 895316 rplW Chlamydophila pneumoniae CWL029 50S ribosomal protein L23 NP_224841.1 728595 R 115713 CDS NP_224842.1 15618556 895289 complement(728947..729621) 1 NC_000922.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 729621 rplD 895289 rplD Chlamydophila pneumoniae CWL029 50S ribosomal protein L4 NP_224842.1 728947 R 115713 CDS NP_224843.2 161353776 895317 complement(729654..730313) 1 NC_000922.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 730313 rplC 895317 rplC Chlamydophila pneumoniae CWL029 50S ribosomal protein L3 NP_224843.2 729654 R 115713 CDS NP_224844.1 15618558 895288 complement(730602..731603) 1 NC_000922.1 hypothetical protein 731603 895288 CPn0648 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224844.1 730602 R 115713 CDS NP_224845.1 15618559 895283 complement(731707..732672) 1 NC_000922.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 732672 fmt 895283 fmt Chlamydophila pneumoniae CWL029 methionyl-tRNA formyltransferase NP_224845.1 731707 R 115713 CDS NP_224846.1 15618560 895282 complement(732662..733501) 1 NC_000922.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 733501 lpxA 895282 lpxA Chlamydophila pneumoniae CWL029 UDP-N-acetylglucosamine acyltransferase NP_224846.1 732662 R 115713 CDS NP_224847.1 15618561 895281 complement(733514..733975) 1 NC_000922.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 733975 fabZ 895281 fabZ Chlamydophila pneumoniae CWL029 (3R)-hydroxymyristoyl-ACP dehydratase NP_224847.1 733514 R 115713 CDS NP_224848.1 15618562 895280 complement(733987..734835) 1 NC_000922.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 734835 lpxC 895280 lpxC Chlamydophila pneumoniae CWL029 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase NP_224848.1 733987 R 115713 CDS NP_224849.1 15618563 895279 complement(734865..736490) 1 NC_000922.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 736490 lnt 895279 lnt Chlamydophila pneumoniae CWL029 apolipoprotein N-acyltransferase NP_224849.1 734865 R 115713 CDS NP_224850.1 15618564 895278 complement(736500..736967) 1 NC_000922.1 acyl-CoA thioesterase 736967 yciA 895278 yciA Chlamydophila pneumoniae CWL029 acyl-CoA thioesterase NP_224850.1 736500 R 115713 CDS NP_224851.1 15618565 895273 complement(737098..737847) 1 NC_000922.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 737847 dnaQ_2 895273 dnaQ_2 Chlamydophila pneumoniae CWL029 DNA polymerase III subunit epsilon NP_224851.1 737098 R 115713 CDS NP_224853.1 15618567 895271 complement(738048..738473) 1 NC_000922.1 hypothetical protein 738473 yjeE 895271 yjeE Chlamydophila pneumoniae CWL029 hypothetical protein NP_224853.1 738048 R 115713 CDS NP_224854.1 15618568 895290 complement(738452..739168) 1 NC_000922.1 hypothetical protein 739168 895290 CPn0658 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224854.1 738452 R 115713 CDS NP_224855.1 15618569 895251 739533..739841 1 NC_000922.1 thioredoxin 739841 trxA 895251 trxA Chlamydophila pneumoniae CWL029 thioredoxin NP_224855.1 739533 D 115713 CDS NP_224856.1 15618570 895254 complement(739857..740327) 1 NC_000922.1 rRNA methylase 740327 spoU_2 895254 spoU_2 Chlamydophila pneumoniae CWL029 rRNA methylase NP_224856.1 739857 R 115713 CDS NP_224857.1 15618571 895248 complement(740324..741100) 1 NC_000922.1 FKBP-type peptidylprolyl isomerase 741100 mip 895248 mip Chlamydophila pneumoniae CWL029 FKBP-type peptidylprolyl isomerase NP_224857.1 740324 R 115713 CDS NP_224858.1 15618572 895247 complement(741169..742923) 1 NC_000922.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 742923 aspS 895247 aspS Chlamydophila pneumoniae CWL029 aspartyl-tRNA synthetase NP_224858.1 741169 R 115713 CDS NP_224859.1 15618573 895245 complement(742898..744190) 1 NC_000922.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 744190 hisS 895245 hisS Chlamydophila pneumoniae CWL029 histidyl-tRNA synthetase NP_224859.1 742898 R 115713 CDS NP_224860.1 15618574 895246 complement(744554..744757) 1 NC_000922.1 hypothetical protein 744757 895246 CPn0664 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224860.1 744554 R 115713 CDS NP_224861.1 15618575 895238 745001..746368 1 NC_000922.1 hexosphosphate transport 746368 uhpC 895238 uhpC Chlamydophila pneumoniae CWL029 hexosphosphate transport NP_224861.1 745001 D 115713 CDS NP_224862.1 15618576 895233 746388..750110 1 NC_000922.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 750110 dnaE 895233 dnaE Chlamydophila pneumoniae CWL029 DNA polymerase III subunit alpha NP_224862.1 746388 D 115713 CDS NP_224863.1 15618577 895239 complement(750174..751058) 1 NC_000922.1 hypothetical protein 751058 895239 CPn0667 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224863.1 750174 R 115713 CDS NP_224864.1 15618578 895237 751209..752165 1 NC_000922.1 hypothetical protein 752165 895237 CPn0668 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224864.1 751209 D 115713 CDS NP_224865.1 15618579 895232 752179..752778 1 NC_000922.1 hypothetical protein 752778 895232 CPn0669 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224865.1 752179 D 115713 CDS NP_224866.1 15618580 895482 752765..753199 1 NC_000922.1 sigma regulatory factor-histidine kinase 753199 rsbW 895482 rsbW Chlamydophila pneumoniae CWL029 sigma regulatory factor-histidine kinase NP_224866.1 752765 D 115713 CDS NP_224867.1 15618581 895255 complement(753202..753630) 1 NC_000922.1 hypothetical protein 753630 895255 CPn0671 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224867.1 753202 R 115713 CDS NP_224868.1 15618582 895460 753741..755051 1 NC_000922.1 D-Ala-D-Ala carboxypeptidase 755051 dacF 895460 dacF Chlamydophila pneumoniae CWL029 D-Ala-D-Ala carboxypeptidase NP_224868.1 753741 D 115713 CDS NP_224869.1 15618583 895441 755287..755466 1 NC_000922.1 hypothetical protein 755466 895441 CPn0673 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224869.1 755287 D 115713 CDS NP_224870.1 15618584 895422 complement(755574..756668) 1 NC_000922.1 RNA methyltransferase 756668 fmu 895422 fmu Chlamydophila pneumoniae CWL029 RNA methyltransferase NP_224870.1 755574 R 115713 CDS NP_224871.1 15618585 895459 complement(756765..757919) 1 NC_000922.1 hypothetical protein 757919 895459 CPn0675 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224871.1 756765 R 115713 CDS NP_224872.1 15618586 895439 complement(758048..759217) 1 NC_000922.1 hypothetical protein 759217 895439 CPn0676 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224872.1 758048 R 115713 CDS NP_224873.1 15618587 895440 complement(759253..760401) 1 NC_000922.1 hypothetical protein 760401 895440 CPn0677 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224873.1 759253 R 115713 CDS NP_224874.1 15618588 895420 complement(760679..761320) 1 NC_000922.1 hypothetical protein 761320 895420 CPn0678 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224874.1 760679 R 115713 CDS NP_224875.1 15618589 895421 complement(761722..762930) 1 NC_000922.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 762930 pgk 895421 pgk Chlamydophila pneumoniae CWL029 phosphoglycerate kinase NP_224875.1 761722 R 115713 CDS NP_224876.1 15618590 895403 complement(762968..764248) 1 NC_000922.1 phosphate permease 764248 ygo4 895403 ygo4 Chlamydophila pneumoniae CWL029 phosphate permease NP_224876.1 762968 R 115713 CDS NP_224877.1 15618591 895402 complement(764255..764929) 1 NC_000922.1 hypothetical protein 764929 895402 CPn0681 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224877.1 764255 R 115713 CDS NP_224878.1 15618592 895396 764984..765958 1 NC_000922.1 peptide ABC transporter ATPase 765958 dppD 895396 dppD Chlamydophila pneumoniae CWL029 peptide ABC transporter ATPase NP_224878.1 764984 D 115713 CDS NP_224879.1 15618593 895401 765948..766922 1 NC_000922.1 peptide ABC transporter ATPase 766922 dppF_2 895401 dppF_2 Chlamydophila pneumoniae CWL029 peptide ABC transporter ATPase NP_224879.1 765948 D 115713 CDS NP_224880.1 15618594 895395 complement(767178..768038) 1 NC_000922.1 chromosome partitioning protein 768038 parB 895395 parB Chlamydophila pneumoniae CWL029 chromosome partitioning protein NP_224880.1 767178 R 115713 CDS NP_224882.1 15618596 895400 complement(768173..768361) 1 NC_000922.1 hypothetical protein 768361 895400 CPn0686 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224882.1 768173 R 115713 CDS NP_224883.1 15618597 895371 768564..769217 1 NC_000922.1 hypothetical protein 769217 895371 CPn0687 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224883.1 768564 D 115713 CDS NP_224884.1 15618598 895344 769382..770140 1 NC_000922.1 hypothetical protein 770140 895344 CPn0688 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224884.1 769382 D 115713 CDS NP_224885.1 15618599 895369 complement(770184..771404) 1 NC_000922.1 NifS-like aminotransferase 771404 yfhO_1 895369 yfhO_1 Chlamydophila pneumoniae CWL029 NifS-like aminotransferase NP_224885.1 770184 R 115713 CDS NP_224886.1 15618600 895342 complement(771433..772680) 1 NC_000922.1 ABC transporter 772680 895342 CPn0690 Chlamydophila pneumoniae CWL029 ABC transporter NP_224886.1 771433 R 115713 CDS NP_224887.1 15618601 895343 complement(772682..773452) 1 NC_000922.1 ABC transporter ATPase 773452 abcX 895343 abcX Chlamydophila pneumoniae CWL029 ABC transporter ATPase NP_224887.1 772682 R 115713 CDS NP_224888.1 15618602 895483 complement(773458..774912) 1 NC_000922.1 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase 774912 895483 CPn0692 Chlamydophila pneumoniae CWL029 cysteine desulfurase NP_224888.1 773458 R 115713 CDS NP_224889.1 15618603 895304 complement(775237..776256) 1 NC_000922.1 hypothetical protein 776256 895304 CPn0693 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224889.1 775237 R 115713 CDS NP_224890.1 15618604 895297 complement(776327..779599) 1 NC_000922.1 PBP2-transglycosylase/transpeptidase 779599 pbp2 895297 pbp2 Chlamydophila pneumoniae CWL029 PBP2-transglycosylase/transpeptidase NP_224890.1 776327 R 115713 CDS NP_224891.1 15618605 895370 780216..781385 1 NC_000922.1 major outer membrane protein 781385 ompA 895370 ompA Chlamydophila pneumoniae CWL029 major outer membrane protein NP_224891.1 780216 D 115713 CDS NP_224892.1 15618606 895296 781769..782602 1 NC_000922.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 782602 rpsB 895296 rpsB Chlamydophila pneumoniae CWL029 30S ribosomal protein S2 NP_224892.1 781769 D 115713 CDS NP_224893.1 15618607 895295 782602..783450 1 NC_000922.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 783450 tsf 895295 tsf Chlamydophila pneumoniae CWL029 elongation factor Ts NP_224893.1 782602 D 115713 CDS NP_224894.1 15618608 895268 783458..784204 1 NC_000922.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 784204 pyrH 895268 pyrH Chlamydophila pneumoniae CWL029 uridylate kinase NP_224894.1 783458 D 115713 CDS NP_224895.1 15618609 895241 784182..784724 1 NC_000922.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 784724 frr 895241 frr Chlamydophila pneumoniae CWL029 ribosome recycling factor NP_224895.1 784182 D 115713 CDS NP_224896.1 15618610 895240 785097..785612 1 NC_000922.1 hypothetical protein 785612 895240 CPn0700 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224896.1 785097 D 115713 CDS NP_224897.1 15618611 895226 785599..786675 1 NC_000922.1 ATP:guanido phosphotransferase 786675 karG 895226 karG Chlamydophila pneumoniae CWL029 ATP:guanido phosphotransferase NP_224897.1 785599 D 115713 CDS NP_224898.1 15618612 895225 complement(786926..789685) 1 NC_000922.1 Yop proteins translocation protein C/general secretion pathway protein 789685 yscC 895225 yscC Chlamydophila pneumoniae CWL029 Yop proteins translocation protein C/general secretion pathway protein NP_224898.1 786926 R 115713 CDS NP_224899.1 15618613 895224 complement(789682..791190) 1 NC_000922.1 S/T protein kinase 791190 895224 CPn0703 Chlamydophila pneumoniae CWL029 S/T protein kinase NP_224899.1 789682 R 115713 CDS NP_224900.1 15618614 895428 complement(791206..792321) 1 NC_000922.1 type III secretion system protein 792321 fliN 895428 fliN Chlamydophila pneumoniae CWL029 type III secretion system protein NP_224900.1 791206 R 115713 CDS NP_224901.1 15618615 895287 complement(792331..793173) 1 NC_000922.1 hypothetical protein 793173 895287 CPn0705 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224901.1 792331 R 115713 CDS NP_224902.1 15618616 895426 complement(793177..793683) 1 NC_000922.1 hypothetical protein 793683 895426 CPn0706 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224902.1 793177 R 115713 CDS NP_224903.1 15618617 895269 complement(793701..795029) 1 NC_000922.1 type III secretion system ATPase 795029 yscN 895269 yscN Chlamydophila pneumoniae CWL029 type III secretion system ATPase NP_224903.1 793701 R 115713 CDS NP_224904.1 15618618 895286 complement(795031..795705) 1 NC_000922.1 hypothetical protein 795705 895286 CPn0708 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224904.1 795031 R 115713 CDS NP_224905.1 15618619 895260 complement(795739..796188) 1 NC_000922.1 hypothetical protein 796188 895260 CPn0709 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224905.1 795739 R 115713 CDS NP_224906.1 15618620 895427 complement(796207..796461) 1 NC_000922.1 hypothetical protein 796461 895427 CPn0710 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224906.1 796207 R 115713 CDS NP_224907.1 15618621 895229 complement(796483..796731) 1 NC_000922.1 hypothetical protein 796731 895229 CPn0711 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224907.1 796483 R 115713 CDS NP_224908.1 15618622 895429 complement(796778..799315) 1 NC_000922.1 FHA domain-containing protein 799315 895429 CPn0712 Chlamydophila pneumoniae CWL029 FHA domain-containing protein NP_224908.1 796778 R 115713 CDS NP_224909.1 15618623 895230 complement(799329..799721) 1 NC_000922.1 hypothetical protein 799721 895230 CPn0713 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224909.1 799329 R 115713 CDS NP_224910.1 15618624 895228 complement(800088..801107) 1 NC_000922.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 801107 hemA 895228 hemA Chlamydophila pneumoniae CWL029 glutamyl-tRNA reductase NP_224910.1 800088 R 115713 CDS NP_224911.1 15618625 894744 801657..803465 1 NC_000922.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 803465 gyrB_2 894744 gyrB_2 Chlamydophila pneumoniae CWL029 DNA topoisomerase IV subunit B NP_224911.1 801657 D 115713 CDS NP_224912.1 15618626 895509 803469..804905 1 NC_000922.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 804905 gyrA_2 895509 gyrA_2 Chlamydophila pneumoniae CWL029 DNA topoisomerase IV subunit A NP_224912.1 803469 D 115713 CDS NP_224913.1 15618627 894721 805010..805309 1 NC_000922.1 hypothetical protein 805309 894721 CPn0717 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224913.1 805010 D 115713 CDS NP_224914.1 15618628 895306 805309..805629 1 NC_000922.1 hypothetical protein 805629 895306 CPn0718 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224914.1 805309 D 115713 CDS NP_224915.1 15618629 894738 805916..806893 1 NC_000922.1 pseudouridine synthase 806893 sfhB 894738 sfhB Chlamydophila pneumoniae CWL029 pseudouridine synthase NP_224915.1 805916 D 115713 CDS NP_224916.1 15618630 894736 807003..807239 1 NC_000922.1 hypothetical protein 807239 894736 CPn0720 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224916.1 807003 D 115713 CDS NP_224917.1 15618631 895556 807683..808492 1 NC_000922.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 808492 kdsA 895556 kdsA Chlamydophila pneumoniae CWL029 2-dehydro-3-deoxyphosphooctonate aldolase NP_224917.1 807683 D 115713 CDS NP_224918.1 15618632 894760 808489..808977 1 NC_000922.1 hypothetical protein 808977 894760 CPn0722 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224918.1 808489 D 115713 CDS NP_224919.1 15618633 894703 808984..809706 1 NC_000922.1 ABC transporter ATPase 809706 yhbG 894703 yhbG Chlamydophila pneumoniae CWL029 ABC transporter ATPase NP_224919.1 808984 D 115713 CDS NP_224920.1 15618634 895517 complement(809703..810527) 1 NC_000922.1 hypothetical protein 810527 895517 CPn0724 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224920.1 809703 R 115713 CDS NP_224921.1 15618635 895504 complement(810584..810811) 1 NC_000922.1 hypothetical protein 810811 895504 CPn0725 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224921.1 810584 R 115713 CDS NP_224922.1 15618636 895566 complement(810877..813372) 1 NC_000922.1 hypothetical protein 813372 895566 CPn0726 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224922.1 810877 R 115713 CDS NP_224923.1 15618637 895524 813577..816195 1 NC_000922.1 hypothetical protein 816195 895524 CPn0727 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224923.1 813577 D 115713 CDS NP_224924.1 15618638 895505 complement(816522..818477) 1 NC_000922.1 hypothetical protein 818477 895505 CPn0728 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224924.1 816522 R 115713 CDS NP_224925.1 15618639 894734 complement(818589..819857) 1 NC_000922.1 hypothetical protein 819857 894734 CPn0729 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224925.1 818589 R 115713 CDS NP_224926.1 15618640 895572 complement(819960..821603) 1 NC_000922.1 hypothetical protein 821603 mviN 895572 mviN Chlamydophila pneumoniae CWL029 hypothetical protein NP_224926.1 819960 R 115713 CDS NP_224927.1 15618641 895519 821587..821763 1 NC_000922.1 hypothetical protein 821763 895519 CPn0731 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224927.1 821587 D 115713 CDS NP_224928.1 15618642 895543 822098..822979 1 NC_000922.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 822979 nfo 895543 nfo Chlamydophila pneumoniae CWL029 endonuclease IV NP_224928.1 822098 D 115713 CDS NP_224929.1 15618643 894837 complement(823098..823727) 1 NC_000922.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 823727 rpsD 894837 rpsD Chlamydophila pneumoniae CWL029 30S ribosomal protein S4 NP_224929.1 823098 R 115713 CDS NP_224930.1 15618644 894831 823944..824918 1 NC_000922.1 hypothetical protein 824918 yceA 894831 yceA Chlamydophila pneumoniae CWL029 hypothetical protein NP_224930.1 823944 D 115713 CDS NP_224931.1 15618645 894758 complement(825000..825668) 1 NC_000922.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 825668 894758 CPn0735 Chlamydophila pneumoniae CWL029 uridine kinase NP_224931.1 825000 R 115713 CDS NP_224932.1 15618646 895587 complement(825989..827686) 1 NC_000922.1 efflux protein 827686 ygeD 895587 ygeD Chlamydophila pneumoniae CWL029 efflux protein NP_224932.1 825989 R 115713 CDS NP_224933.1 15618647 894729 827685..830759 1 NC_000922.1 exodeoxyribonuclease V subunit gamma 830759 recC 894729 recC Chlamydophila pneumoniae CWL029 exodeoxyribonuclease V subunit gamma NP_224933.1 827685 D 115713 CDS NP_224934.1 15618648 894853 830746..833898 1 NC_000922.1 exodeoxyribonuclease V subunit beta 833898 recB 894853 recB Chlamydophila pneumoniae CWL029 exodeoxyribonuclease V subunit beta NP_224934.1 830746 D 115713 CDS NP_224935.1 15618649 895575 complement(833858..834871) 1 NC_000922.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 834871 895575 CPn0739 Chlamydophila pneumoniae CWL029 rod shape-determining protein MreC NP_224935.1 833858 R 115713 CDS NP_224936.1 15618650 895559 complement(834861..836048) 1 NC_000922.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 836048 tyrB 895559 tyrB Chlamydophila pneumoniae CWL029 aromatic amino acid aminotransferase NP_224936.1 834861 R 115713 CDS NP_224937.1 15618651 895546 complement(836182..838350) 1 NC_000922.1 contains N-terminal domain of unknown function fused to transcription elongation factor; GreA is necessary for efficient RNA polymerization through arresting sites; cleaves the nascent transcript and allows resumption of transcription elongation; fused transcript cleavage factor/unknown domain-containing protein 838350 greA 895546 greA Chlamydophila pneumoniae CWL029 fused transcript cleavage factor/unknown domain-containing protein NP_224937.1 836182 R 115713 CDS NP_224938.1 15618652 895531 838463..838891 1 NC_000922.1 hypothetical protein 838891 895531 CPn0742 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224938.1 838463 D 115713 CDS NP_224939.1 15618653 895539 838962..840365 1 NC_000922.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 840365 nqrA 895539 nqrA Chlamydophila pneumoniae CWL029 Na(+)-translocating NADH-quinone reductase subunit A NP_224939.1 838962 D 115713 CDS NP_224940.1 15618654 895528 complement(840386..841384) 1 NC_000922.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 841384 hemB 895528 hemB Chlamydophila pneumoniae CWL029 delta-aminolevulinic acid dehydratase NP_224940.1 840386 R 115713 CDS NP_224941.1 15618655 894830 complement(841739..841903) 1 NC_000922.1 hypothetical protein 841903 894830 CPn0745 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224941.1 841739 R 115713 CDS NP_224942.1 15618656 894801 841975..843570 1 NC_000922.1 hypothetical protein 843570 894801 CPn0746 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224942.1 841975 D 115713 CDS NP_224943.1 15618657 894815 complement(844118..844987) 1 NC_000922.1 geranyl transtransferase 844987 ispA 894815 ispA Chlamydophila pneumoniae CWL029 geranyl transtransferase NP_224943.1 844118 R 115713 CDS NP_224944.1 15618658 894802 complement(845003..845629) 1 NC_000922.1 UDP-GlcNAc pyrophosphorylase 845629 glmU 894802 glmU Chlamydophila pneumoniae CWL029 UDP-GlcNAc pyrophosphorylase NP_224944.1 845003 R 115713 CDS NP_224945.1 15618659 895521 complement(845704..846411) 1 NC_000922.1 HTH transcriptional regulator/receiver domain-containing protein 846411 tctD 895521 tctD Chlamydophila pneumoniae CWL029 HTH transcriptional regulator/receiver domain-containing protein NP_224945.1 845704 R 115713 CDS NP_224946.1 15618660 894880 846608..848437 1 NC_000922.1 hypothetical protein 848437 894880 CPn0751 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224946.1 846608 D 115713 CDS NP_224947.1 15618661 894888 848604..850085 1 NC_000922.1 exodeoxyribonuclease V subunit alpha 850085 recD_2 894888 recD_2 Chlamydophila pneumoniae CWL029 exodeoxyribonuclease V subunit alpha NP_224947.1 848604 D 115713 CDS NP_224948.1 15618662 894894 complement(850158..851006) 1 NC_000922.1 hypothetical protein 851006 894894 CPn0753 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224948.1 850158 R 115713 CDS NP_224949.1 15618663 894899 complement(851037..851336) 1 NC_000922.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 851336 rpsT 894899 rpsT Chlamydophila pneumoniae CWL029 30S ribosomal protein S20 NP_224949.1 851037 R 115713 CDS NP_224950.1 15618664 894906 851597..852802 1 NC_000922.1 hypothetical protein 852802 894906 CPn0755 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224950.1 851597 D 115713 CDS NP_224951.1 15618665 894915 852961..854679 1 NC_000922.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; RNA polymerase sigma factor 854679 rpoD 894915 rpoD Chlamydophila pneumoniae CWL029 RNA polymerase sigma factor NP_224951.1 852961 D 115713 CDS NP_224952.1 15618666 894921 854733..855137 1 NC_000922.1 dihydroneopterin aldolase 855137 folX 894921 folX Chlamydophila pneumoniae CWL029 dihydroneopterin aldolase NP_224952.1 854733 D 115713 CDS NP_224953.1 15618667 894959 855110..856462 1 NC_000922.1 dihydropteroate synthase 856462 folP 894959 folP Chlamydophila pneumoniae CWL029 dihydropteroate synthase NP_224953.1 855110 D 115713 CDS NP_224954.1 15618668 894934 856488..857000 1 NC_000922.1 dihydrofolate reductase 857000 folA 894934 folA Chlamydophila pneumoniae CWL029 dihydrofolate reductase NP_224954.1 856488 D 115713 CDS NP_224955.1 15618669 894943 856957..857697 1 NC_000922.1 hypothetical protein 857697 894943 CPn0760 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224955.1 856957 D 115713 CDS NP_224956.1 15618670 894950 857704..858378 1 NC_000922.1 hypothetical protein 858378 894950 CPn0761 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224956.1 857704 D 115713 CDS NP_224957.1 15618671 894964 complement(858536..859597) 1 NC_000922.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 859597 recA 894964 recA Chlamydophila pneumoniae CWL029 recombinase A NP_224957.1 858536 R 115713 CDS NP_224958.1 15618672 894974 complement(859969..860511) 1 NC_000922.1 formyltetrahydrofolate cycloligase 860511 ygfA 894974 ygfA Chlamydophila pneumoniae CWL029 formyltetrahydrofolate cycloligase NP_224958.1 859969 R 115713 CDS NP_224959.1 15618673 894978 complement(860521..861807) 1 NC_000922.1 hypothetical protein 861807 894978 CPn0764 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224959.1 860521 R 115713 CDS NP_224960.1 15618674 894986 complement(861798..862382) 1 NC_000922.1 hypothetical protein 862382 894986 CPn0765 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224960.1 861798 R 115713 CDS NP_224961.1 15618675 894995 complement(862391..863782) 1 NC_000922.1 hypothetical protein 863782 894995 CPn0766 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224961.1 862391 R 115713 CDS NP_224962.1 15618676 895006 863884..864180 1 NC_000922.1 hypothetical protein 864180 895006 CPn0767 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224962.1 863884 D 115713 CDS NP_224963.1 15618677 895018 864159..865166 1 NC_000922.1 oxidoreductase 865166 yohI 895018 yohI Chlamydophila pneumoniae CWL029 oxidoreductase NP_224963.1 864159 D 115713 CDS NP_224964.1 15618678 895036 complement(865118..867733) 1 NC_000922.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I/SWI domain fusion protein 867733 topA 895036 topA Chlamydophila pneumoniae CWL029 DNA topoisomerase I/SWI domain fusion protein NP_224964.1 865118 R 115713 CDS NP_224965.1 15618679 895025 868340..869134 1 NC_000922.1 hypothetical protein 869134 895025 CPn0770 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224965.1 868340 D 115713 CDS NP_224966.1 15618680 895043 complement(869141..870463) 1 NC_000922.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 870463 rpoN 895043 rpoN Chlamydophila pneumoniae CWL029 RNA polymerase factor sigma-54 NP_224966.1 869141 R 115713 CDS NP_224967.1 15618681 895052 complement(870466..872385) 1 NC_000922.1 DNA helicase 872385 uvrD 895052 uvrD Chlamydophila pneumoniae CWL029 DNA helicase NP_224967.1 870466 R 115713 CDS NP_224968.1 15618682 895046 872488..873198 1 NC_000922.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 873198 ung 895046 ung Chlamydophila pneumoniae CWL029 uracil-DNA glycosylase NP_224968.1 872488 D 115713 CDS NP_224969.1 15618683 895057 873195..873428 1 NC_000922.1 hypothetical protein 873428 895057 CPn0774 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224969.1 873195 D 115713 CDS NP_224970.1 15618684 895062 complement(873411..874031) 1 NC_000922.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 874031 yggV 895062 yggV Chlamydophila pneumoniae CWL029 deoxyribonucleotide triphosphate pyrophosphatase NP_224970.1 873411 R 115713 CDS NP_224971.1 15618685 895069 874246..875490 1 NC_000922.1 hypothetical protein 875490 895069 CPn0776 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224971.1 874246 D 115713 CDS NP_224972.1 15618686 895077 875601..877181 1 NC_000922.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; molecular chaperone GorEL 877181 groEL 895077 groEL Chlamydophila pneumoniae CWL029 molecular chaperone GorEL NP_224972.1 875601 D 115713 CDS NP_224973.1 15618687 895087 877505..878095 1 NC_000922.1 thio-specific antioxidant peroxidase 878095 ahpC 895087 ahpC Chlamydophila pneumoniae CWL029 thio-specific antioxidant peroxidase NP_224973.1 877505 D 115713 CDS NP_224974.1 15618688 895093 complement(878092..878481) 1 NC_000922.1 hypothetical protein 878481 895093 CPn0779 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224974.1 878092 R 115713 CDS NP_224975.1 15618689 895100 complement(878588..879205) 1 NC_000922.1 N-acetylmuramoyl alanine amidase 879205 amiB 895100 amiB Chlamydophila pneumoniae CWL029 N-acetylmuramoyl alanine amidase NP_224975.1 878588 R 115713 CDS NP_224976.1 15618690 895106 complement(879195..879773) 1 NC_000922.1 peptidoglycan-associated lipoprotein 879773 pal 895106 pal Chlamydophila pneumoniae CWL029 peptidoglycan-associated lipoprotein NP_224976.1 879195 R 115713 CDS NP_224977.1 15618691 895117 complement(879770..881065) 1 NC_000922.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 881065 tolB 895117 tolB Chlamydophila pneumoniae CWL029 translocation protein TolB NP_224977.1 879770 R 115713 CDS NP_224978.1 15618692 895124 complement(881097..881885) 1 NC_000922.1 hypothetical protein 881885 895124 CPn0783 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224978.1 881097 R 115713 CDS NP_224979.1 15618693 895131 complement(881889..882296) 1 NC_000922.1 biopolymer transport protein 882296 exbD 895131 exbD Chlamydophila pneumoniae CWL029 biopolymer transport protein NP_224979.1 881889 R 115713 CDS NP_224980.1 15618694 895137 complement(882293..882991) 1 NC_000922.1 proton channel protein TolQ 882991 exbB 895137 exbB Chlamydophila pneumoniae CWL029 proton channel protein TolQ NP_224980.1 882293 R 115713 CDS NP_224981.1 15618695 895512 883185..885296 1 NC_000922.1 thiol:disulfide interchange protein 885296 dsbD 895512 dsbD Chlamydophila pneumoniae CWL029 thiol:disulfide interchange protein NP_224981.1 883185 D 115713 CDS NP_224982.1 15618696 895562 885619..886404 1 NC_000922.1 hydrolase 886404 yabD 895562 yabD Chlamydophila pneumoniae CWL029 hydrolase NP_224982.1 885619 D 115713 CDS NP_224983.1 15618697 894789 886542..887435 1 NC_000922.1 succinate dehydrogenase 887435 sdhC 894789 sdhC Chlamydophila pneumoniae CWL029 succinate dehydrogenase NP_224983.1 886542 D 115713 CDS NP_224984.1 15618698 894788 887439..889319 1 NC_000922.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 889319 sdhA 894788 sdhA Chlamydophila pneumoniae CWL029 succinate dehydrogenase flavoprotein subunit NP_224984.1 887439 D 115713 CDS NP_224985.1 15618699 894785 889330..890106 1 NC_000922.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 890106 sdhB 894785 sdhB Chlamydophila pneumoniae CWL029 succinate dehydrogenase iron-sulfur subunit NP_224985.1 889330 D 115713 CDS NP_224986.1 15618700 894784 complement(890108..893050) 1 NC_000922.1 hypothetical protein 893050 894784 CPn0791 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224986.1 890108 R 115713 CDS NP_224987.1 15618701 894786 complement(893105..894919) 1 NC_000922.1 hypothetical protein 894919 894786 CPn0792 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224987.1 893105 R 115713 CDS NP_224988.1 15618702 894665 complement(894916..896823) 1 NC_000922.1 sigma regulatory family PP2C phosphatase 896823 rbsU 894665 rbsU Chlamydophila pneumoniae CWL029 sigma regulatory family PP2C phosphatase NP_224988.1 894916 R 115713 CDS NP_224989.1 15618703 894702 897174..898007 1 NC_000922.1 hypothetical protein 898007 894702 CPn0794 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224989.1 897174 D 115713 CDS NP_224990.1 15618704 894868 898128..899198 1 NC_000922.1 hypothetical protein 899198 894868 CPn0795 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224990.1 898128 D 115713 CDS NP_224991.1 15618705 894753 899301..901343 1 NC_000922.1 hypothetical protein 901343 894753 CPn0796 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224991.1 899301 D 115713 CDS NP_224992.1 15618706 894769 901600..902697 1 NC_000922.1 hypothetical protein 902697 894769 CPn0797 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224992.1 901600 D 115713 CDS NP_224993.1 15618707 894663 902846..903859 1 NC_000922.1 hypothetical protein 903859 894663 CPn0798 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224993.1 902846 D 115713 CDS NP_224994.1 15618708 895655 complement(903937..904986) 1 NC_000922.1 hypothetical protein 904986 895655 CPn0799 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224994.1 903937 R 115713 CDS NP_224995.1 15618709 894776 complement(905246..906532) 1 NC_000922.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 906532 eno 894776 eno Chlamydophila pneumoniae CWL029 phosphopyruvate hydratase NP_224995.1 905246 R 115713 CDS NP_224996.1 15618710 894666 complement(906724..908697) 1 NC_000922.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 908697 uvrB 894666 uvrB Chlamydophila pneumoniae CWL029 excinuclease ABC subunit B NP_224996.1 906724 R 115713 CDS NP_224997.1 15618711 895541 complement(908706..909740) 1 NC_000922.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 909740 trpS 895541 trpS Chlamydophila pneumoniae CWL029 tryptophanyl-tRNA synthetase NP_224997.1 908706 R 115713 CDS NP_224998.1 15618712 894751 complement(909749..910303) 1 NC_000922.1 hypothetical protein 910303 894751 CPn0803 Chlamydophila pneumoniae CWL029 hypothetical protein NP_224998.1 909749 R 115713 CDS NP_224999.1 15618713 894767 complement(910307..911059) 1 NC_000922.1 hypothetical protein 911059 gp6D 894767 gp6D Chlamydophila pneumoniae CWL029 hypothetical protein NP_224999.1 910307 R 115713 CDS NP_225000.1 15618714 894771 complement(911064..911831) 1 NC_000922.1 chromosome partitioning ATPase 911831 minD 894771 minD Chlamydophila pneumoniae CWL029 chromosome partitioning ATPase NP_225000.1 911064 R 115713 CDS NP_225001.1 15618715 894780 complement(911864..913771) 1 NC_000922.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 913771 thrS 894780 thrS Chlamydophila pneumoniae CWL029 threonyl-tRNA synthetase NP_225001.1 911864 R 115713 CDS NP_225002.1 15618716 894708 913971..914882 1 NC_000922.1 hypothetical protein 914882 894708 CPn0807 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225002.1 913971 D 115713 CDS NP_225003.1 15618717 895589 complement(914953..916287) 1 NC_000922.1 hypothetical protein 916287 895589 CPn0808 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225003.1 914953 R 115713 CDS NP_225004.1 15618718 894727 complement(916304..917785) 1 NC_000922.1 hypothetical protein 917785 894727 CPn0809 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225004.1 916304 R 115713 CDS NP_225005.1 15618719 894997 complement(917822..918184) 1 NC_000922.1 hypothetical protein 918184 894997 CPn0810 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225005.1 917822 R 115713 CDS NP_225006.1 15618720 894648 complement(918205..918900) 1 NC_000922.1 low calcium response protein H 918900 lcrH_1 894648 lcrH_1 Chlamydophila pneumoniae CWL029 low calcium response protein H NP_225006.1 918205 R 115713 CDS NP_225007.1 15618721 894840 919123..920865 1 NC_000922.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 920865 mutL 894840 mutL Chlamydophila pneumoniae CWL029 DNA mismatch repair protein NP_225007.1 919123 D 115713 CDS NP_225008.1 15618722 894668 920870..921937 1 NC_000922.1 aminopeptidase 921937 pepP 894668 pepP Chlamydophila pneumoniae CWL029 aminopeptidase NP_225008.1 920870 D 115713 CDS NP_225009.1 15618723 894654 922107..923360 1 NC_000922.1 hypothetical protein 923360 894654 CPn0814 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225009.1 922107 D 115713 CDS NP_225010.1 15618724 895204 923361..925625 1 NC_000922.1 general secretion protein D 925625 gspD 895204 gspD Chlamydophila pneumoniae CWL029 general secretion protein D NP_225010.1 923361 D 115713 CDS NP_225011.1 15618725 894688 925615..927105 1 NC_000922.1 genral secretion protein E 927105 gspE 894688 gspE Chlamydophila pneumoniae CWL029 genral secretion protein E NP_225011.1 925615 D 115713 CDS NP_225012.1 15618726 895072 927115..928290 1 NC_000922.1 general secretion protein F 928290 gspF 895072 gspF Chlamydophila pneumoniae CWL029 general secretion protein F NP_225012.1 927115 D 115713 CDS NP_225013.1 15618727 894696 928314..928685 1 NC_000922.1 leader peptide; hypothetical protein 928685 894696 CPn0818 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225013.1 928314 D 115713 CDS NP_225014.1 15618728 895187 928689..929135 1 NC_000922.1 hypothetical protein 929135 895187 CPn0819 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225014.1 928689 D 115713 CDS NP_225015.1 15618729 894697 929120..929662 1 NC_000922.1 hypothetical protein 929662 894697 CPn0820 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225015.1 929120 D 115713 CDS NP_225016.1 15618730 895164 929667..930671 1 NC_000922.1 hypothetical protein 930671 895164 CPn0821 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225016.1 929667 D 115713 CDS NP_225017.1 15618731 894656 930756..931232 1 NC_000922.1 hypothetical protein 931232 894656 CPn0822 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225017.1 930756 D 115713 CDS NP_225018.1 15618732 895522 complement(931498..932367) 1 NC_000922.1 Yop proteins translocation protein T 932367 yscT 895522 yscT Chlamydophila pneumoniae CWL029 Yop proteins translocation protein T NP_225018.1 931498 R 115713 CDS NP_225019.1 15618733 894725 complement(932375..932662) 1 NC_000922.1 Yop proteins translocation protein S 932662 yscS 894725 yscS Chlamydophila pneumoniae CWL029 Yop proteins translocation protein S NP_225019.1 932375 R 115713 CDS NP_225020.1 15618734 895516 complement(932674..933594) 1 NC_000922.1 type III secretion system protein 933594 yscR 895516 yscR Chlamydophila pneumoniae CWL029 type III secretion system protein NP_225020.1 932674 R 115713 CDS NP_225021.1 15618735 894673 complement(933609..934310) 1 NC_000922.1 type III secretion system protein 934310 yscL 894673 yscL Chlamydophila pneumoniae CWL029 type III secretion system protein NP_225021.1 933609 R 115713 CDS NP_225022.1 15618736 894669 complement(934431..935264) 1 NC_000922.1 hypothetical protein 935264 894669 CPn0827 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225022.1 934431 R 115713 CDS NP_225023.1 15618737 894661 complement(935264..936271) 1 NC_000922.1 Yop proteins translocation lipoprotein J 936271 yscJ 894661 yscJ Chlamydophila pneumoniae CWL029 Yop proteins translocation lipoprotein J NP_225023.1 935264 R 115713 CDS NP_225024.1 15618738 894659 936744..937301 1 NC_000922.1 hypothetical protein 937301 894659 CPn0829 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225024.1 936744 D 115713 CDS NP_225025.1 15618739 894657 937444..937962 1 NC_000922.1 hypothetical protein 937962 894657 CPn0830 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225025.1 937444 D 115713 CDS NP_225026.1 15618740 895165 938267..938437 1 NC_000922.1 hypothetical protein 938437 895165 CPn0831 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225026.1 938267 D 115713 CDS NP_225027.1 15618741 894731 complement(938824..939747) 1 NC_000922.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 939747 lipA 894731 lipA Chlamydophila pneumoniae CWL029 lipoyl synthase NP_225027.1 938824 R 115713 CDS NP_225028.1 15618742 895532 complement(939744..941129) 1 NC_000922.1 E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 941129 lpdA 895532 lpdA Chlamydophila pneumoniae CWL029 dihydrolipoamide dehydrogenase NP_225028.1 939744 R 115713 CDS NP_225029.1 15618743 894662 941553..942017 1 NC_000922.1 hypothetical protein 942017 894662 CPn0834 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225029.1 941553 D 115713 CDS NP_225030.1 15618744 894664 complement(942042..945689) 1 NC_000922.1 SWI/SNF family helicase 945689 894664 CPn0835 Chlamydophila pneumoniae CWL029 SWI/SNF family helicase NP_225030.1 942042 R 115713 CDS NP_225031.1 15618745 894642 complement(945719..946879) 1 NC_000922.1 branched-chain amino acid ABC transporter 946879 brnQ 894642 brnQ Chlamydophila pneumoniae CWL029 branched-chain amino acid ABC transporter NP_225031.1 945719 R 115713 CDS NP_225032.1 15618746 895073 complement(947142..947771) 1 NC_000922.1 endonuclease III 947771 nth 895073 nth Chlamydophila pneumoniae CWL029 endonuclease III NP_225032.1 947142 R 115713 CDS NP_225033.1 15618747 894670 complement(947778..949106) 1 NC_000922.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 949106 trmE 894670 trmE Chlamydophila pneumoniae CWL029 tRNA modification GTPase TrmE NP_225033.1 947778 R 115713 CDS NP_225034.1 15618748 894675 949257..950162 1 NC_000922.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 950162 psdD 894675 psdD Chlamydophila pneumoniae CWL029 phosphatidylserine decarboxylase NP_225034.1 949257 D 115713 CDS NP_225035.1 15618749 894732 950222..951547 1 NC_000922.1 hypothetical protein 951547 894732 CPn0840 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225035.1 950222 D 115713 CDS NP_225036.1 15618750 894803 951731..954643 1 NC_000922.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 954643 secA 894803 secA Chlamydophila pneumoniae CWL029 preprotein translocase subunit SecA NP_225036.1 951731 D 115713 CDS YP_008470950.1 532524905 894634 complement(954991..955191) 1 NC_000922.1 hypothetical protein 955191 894634 CPn0843 Chlamydophila pneumoniae CWL029 hypothetical protein YP_008470950.1 954991 R 115713 CDS NP_225039.1 15618753 894852 complement(955267..956730) 1 NC_000922.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 956730 engA 894852 engA Chlamydophila pneumoniae CWL029 GTP-binding protein EngA NP_225039.1 955267 R 115713 CDS NP_225040.1 15618754 894681 complement(956847..958079) 1 NC_000922.1 poly A polymerase 958079 pcnB_1 894681 pcnB_1 Chlamydophila pneumoniae CWL029 poly A polymerase NP_225040.1 956847 R 115713 CDS NP_225041.1 15618755 894687 complement(958109..959374) 1 NC_000922.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 959374 clpX 894687 clpX Chlamydophila pneumoniae CWL029 ATP-dependent protease ATP-binding subunit ClpX NP_225041.1 958109 R 115713 CDS NP_225042.1 15618756 895088 complement(959384..959995) 1 NC_000922.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 959995 clpP 895088 clpP Chlamydophila pneumoniae CWL029 ATP-dependent Clp protease proteolytic subunit NP_225042.1 959384 R 115713 CDS NP_225043.1 15618757 894678 complement(960174..961502) 1 NC_000922.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 961502 tig 894678 tig Chlamydophila pneumoniae CWL029 trigger factor NP_225043.1 960174 R 115713 CDS NP_225044.1 15618758 895090 961788..965288 1 NC_000922.1 SWI/SNF family helicase 965288 895090 CPn0849 Chlamydophila pneumoniae CWL029 SWI/SNF family helicase NP_225044.1 961788 D 115713 CDS NP_225045.1 15618759 894655 965293..966393 1 NC_000922.1 rod shape-determining protein MreB 966393 mreB 894655 mreB Chlamydophila pneumoniae CWL029 rod shape-determining protein MreB NP_225045.1 965293 D 115713 CDS NP_225046.1 15618760 895150 966396..968198 1 NC_000922.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 968198 pckA 895150 pckA Chlamydophila pneumoniae CWL029 phosphoenolpyruvate carboxykinase NP_225046.1 966396 D 115713 CDS NP_225047.1 15618761 894644 968316..970616 1 NC_000922.1 hypothetical protein 970616 894644 CPn0852 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225047.1 968316 D 115713 CDS NP_225048.1 15618762 895061 970637..971806 1 NC_000922.1 hypothetical protein 971806 895061 CPn0853 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225048.1 970637 D 115713 CDS NP_225049.1 15618763 894651 complement(971803..972837) 1 NC_000922.1 hypothetical protein 972837 porB 894651 porB Chlamydophila pneumoniae CWL029 hypothetical protein NP_225049.1 971803 R 115713 CDS NP_225050.1 15618764 895211 complement(972991..973995) 1 NC_000922.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 973995 gpsA 895211 gpsA Chlamydophila pneumoniae CWL029 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase NP_225050.1 972991 R 115713 CDS NP_225051.1 15618765 894637 complement(973992..975377) 1 NC_000922.1 UDP-glucose pyrophosphorylase 975377 894637 CPn0856 Chlamydophila pneumoniae CWL029 UDP-glucose pyrophosphorylase NP_225051.1 973992 R 115713 CDS NP_225052.1 15618766 894705 complement(975389..975757) 1 NC_000922.1 hypothetical protein 975757 894705 CPn0857 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225052.1 975389 R 115713 CDS NP_225053.1 15618767 894747 complement(975754..977055) 1 NC_000922.1 involved in type III protein export; type III secretion system ATPase 977055 fliI 894747 fliI Chlamydophila pneumoniae CWL029 type III secretion system ATPase NP_225053.1 975754 R 115713 CDS NP_225054.1 15618768 895227 complement(977052..977588) 1 NC_000922.1 hypothetical protein 977588 895227 CPn0859 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225054.1 977052 R 115713 CDS NP_225055.1 15618769 895650 complement(977605..978630) 1 NC_000922.1 type III secretion system protein 978630 fliF 895650 fliF Chlamydophila pneumoniae CWL029 type III secretion system protein NP_225055.1 977605 R 115713 CDS NP_225056.1 15618770 895261 complement(978922..979722) 1 NC_000922.1 NifU-like protein 979722 895261 CPn0861 Chlamydophila pneumoniae CWL029 NifU-like protein NP_225056.1 978922 R 115713 CDS NP_225057.1 15618771 895648 complement(979719..980873) 1 NC_000922.1 NifS-like aminotransferase 980873 yfhO_2 895648 yfhO_2 Chlamydophila pneumoniae CWL029 NifS-like aminotransferase NP_225057.1 979719 R 115713 CDS NP_225058.1 15618772 895583 complement(980828..981514) 1 NC_000922.1 catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 981514 pgmA 895583 pgmA Chlamydophila pneumoniae CWL029 phosphoglyceromutase NP_225058.1 980828 R 115713 CDS NP_225059.1 15618773 895585 981670..982377 1 NC_000922.1 pseudouridine synthase 982377 yjbC 895585 yjbC Chlamydophila pneumoniae CWL029 pseudouridine synthase NP_225059.1 981670 D 115713 CDS NP_225060.1 15618774 895530 982418..982945 1 NC_000922.1 hypothetical protein 982945 895530 CPn0865 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225060.1 982418 D 115713 CDS NP_225061.1 15618775 895513 complement(982913..983491) 1 NC_000922.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 983491 birA 895513 birA Chlamydophila pneumoniae CWL029 biotin--protein ligase NP_225061.1 982913 R 115713 CDS NP_225062.1 15618776 895458 983423..984670 1 NC_000922.1 rod shape protein 984670 rodA 895458 rodA Chlamydophila pneumoniae CWL029 rod shape protein NP_225062.1 983423 D 115713 CDS NP_225063.1 15618777 895693 complement(984667..986643) 1 NC_000922.1 metal transport P-type ATPase 986643 zntA 895693 zntA Chlamydophila pneumoniae CWL029 metal transport P-type ATPase NP_225063.1 984667 R 115713 CDS NP_225064.1 15618778 895430 complement(986655..987401) 1 NC_000922.1 hypothetical protein 987401 895430 CPn0869 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225064.1 986655 R 115713 CDS NP_225065.1 15618779 895685 complement(987445..988728) 1 NC_000922.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 988728 serS 895685 serS Chlamydophila pneumoniae CWL029 seryl-tRNA synthetase NP_225065.1 987445 R 115713 CDS NP_225066.1 15618780 895231 988772..989902 1 NC_000922.1 riboflavin deaminase 989902 ribD 895231 ribD Chlamydophila pneumoniae CWL029 riboflavin deaminase NP_225066.1 988772 D 115713 CDS NP_225067.1 15618781 895694 989963..991219 1 NC_000922.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 991219 ribA/ribB 895694 ribA/ribB Chlamydophila pneumoniae CWL029 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein NP_225067.1 989963 D 115713 CDS NP_225068.1 15618782 895431 991233..991697 1 NC_000922.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 991697 ribH 895431 ribH Chlamydophila pneumoniae CWL029 6,7-dimethyl-8-ribityllumazine synthase NP_225068.1 991233 D 115713 CDS NP_225069.1 15618783 895682 complement(991746..993107) 1 NC_000922.1 hypothetical protein 993107 895682 CPn0874 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225069.1 991746 R 115713 CDS NP_225070.1 15618784 895437 993372..994025 1 NC_000922.1 hypothetical protein 994025 895437 CPn0875 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225070.1 993372 D 115713 CDS NP_225071.1 15618785 895687 994144..995520 1 NC_000922.1 D-alanine/glycine permease 995520 dagA_2 895687 dagA_2 Chlamydophila pneumoniae CWL029 D-alanine/glycine permease NP_225071.1 994144 D 115713 CDS NP_225072.1 15618786 895449 995533..995985 1 NC_000922.1 hypothetical protein 995985 ybcL 895449 ybcL Chlamydophila pneumoniae CWL029 hypothetical protein NP_225072.1 995533 D 115713 CDS NP_225073.1 15618787 895689 complement(995989..996654) 1 NC_000922.1 SET domain-containing protein 996654 895689 CPn0878 Chlamydophila pneumoniae CWL029 SET domain-containing protein NP_225073.1 995989 R 115713 CDS NP_225074.1 15618788 895253 complement(996642..997439) 1 NC_000922.1 metal dependent hydrolase 997439 yycJ 895253 yycJ Chlamydophila pneumoniae CWL029 metal dependent hydrolase NP_225074.1 996642 R 115713 CDS NP_225075.1 15618789 895252 complement(997441..999861) 1 NC_000922.1 DNA translocase FtsK 999861 ftsK 895252 ftsK Chlamydophila pneumoniae CWL029 DNA translocase FtsK NP_225075.1 997441 R 115713 CDS NP_225076.1 15618790 895686 1005667..1006212 1 NC_000922.1 hypothetical protein 1006212 895686 CPn0881 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225076.1 1005667 D 115713 CDS NP_225077.1 15618791 895372 1006268..1007407 1 NC_000922.1 hypothetical protein 1007407 895372 CPn0882 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225077.1 1006268 D 115713 CDS NP_225078.1 15618792 895388 complement(1007570..1008865) 1 NC_000922.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 1008865 nqr6 895388 nqr6 Chlamydophila pneumoniae CWL029 Na(+)-translocating NADH-quinone reductase subunit F NP_225078.1 1007570 R 115713 CDS NP_225079.1 15618793 895683 complement(1009006..1009359) 1 NC_000922.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 1009359 yajC 895683 yajC Chlamydophila pneumoniae CWL029 preprotein translocase subunit YajC NP_225079.1 1009006 R 115713 CDS NP_225080.1 15618794 895438 complement(1009430..1010635) 1 NC_000922.1 rRNA methyltransferse 1010635 ygcA 895438 ygcA Chlamydophila pneumoniae CWL029 rRNA methyltransferse NP_225080.1 1009430 R 115713 CDS NP_225081.1 15618795 895684 complement(1010905..1011276) 1 NC_000922.1 histone-like developmental protein 1011276 hctA 895684 hctA Chlamydophila pneumoniae CWL029 histone-like developmental protein NP_225081.1 1010905 R 115713 CDS NP_225082.1 15618796 895363 1011692..1014160 1 NC_000922.1 hypothetical protein 1014160 895363 CPn0887 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225082.1 1011692 D 115713 CDS NP_225083.1 15618797 895679 complement(1014116..1015423) 1 NC_000922.1 catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX; protoporphyrinogen oxidase 1015423 hemG 895679 hemG Chlamydophila pneumoniae CWL029 protoporphyrinogen oxidase NP_225083.1 1014116 R 115713 CDS NP_225084.1 15618798 895373 complement(1015459..1016835) 1 NC_000922.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1016835 hemN_2 895373 hemN_2 Chlamydophila pneumoniae CWL029 coproporphyrinogen III oxidase NP_225084.1 1015459 R 115713 CDS NP_225085.1 15618799 895681 complement(1016816..1017805) 1 NC_000922.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 1017805 hemE 895681 hemE Chlamydophila pneumoniae CWL029 uroporphyrinogen decarboxylase NP_225085.1 1016816 R 115713 CDS NP_225086.1 15618800 895374 complement(1017816..1021073) 1 NC_000922.1 transcription-repair coupling factor 1021073 mfd 895374 mfd Chlamydophila pneumoniae CWL029 transcription-repair coupling factor NP_225086.1 1017816 R 115713 CDS NP_225087.1 15618801 895680 complement(1021043..1023661) 1 NC_000922.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1023661 alaS 895680 alaS Chlamydophila pneumoniae CWL029 alanyl-tRNA synthetase NP_225087.1 1021043 R 115713 CDS NP_225088.1 15618802 895320 1023894..1025891 1 NC_000922.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 1025891 tktB_1 895320 tktB_1 Chlamydophila pneumoniae CWL029 transketolase NP_225088.1 1023894 D 115713 CDS NP_225089.1 15618803 895675 complement(1025885..1026766) 1 NC_000922.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 1026766 amn 895675 amn Chlamydophila pneumoniae CWL029 AMP nucleosidase NP_225089.1 1025885 R 115713 CDS NP_225090.1 15618804 895345 1026988..1027560 1 NC_000922.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 1027560 efp_2 895345 efp_2 Chlamydophila pneumoniae CWL029 elongation factor P NP_225090.1 1026988 D 115713 CDS NP_225091.1 15618805 895678 1027595..1027825 1 NC_000922.1 hypothetical protein 1027825 895678 CPn0896 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225091.1 1027595 D 115713 CDS NP_225092.1 15618806 895375 complement(1027850..1028737) 1 NC_000922.1 phosphohydrolase 1028737 895375 CPn0897 Chlamydophila pneumoniae CWL029 phosphohydrolase NP_225092.1 1027850 R 115713 CDS NP_225093.1 15618807 895677 complement(1028901..1030460) 1 NC_000922.1 heat shock protein-60 1030460 groEL_3 895677 groEL_3 Chlamydophila pneumoniae CWL029 heat shock protein-60 NP_225093.1 1028901 R 115713 CDS NP_225094.1 15618808 895676 1030875..1032218 1 NC_000922.1 muramoyl-DAP ligase 1032218 murF 895676 murF Chlamydophila pneumoniae CWL029 muramoyl-DAP ligase NP_225094.1 1030875 D 115713 CDS NP_225095.1 15618809 895314 1032235..1033284 1 NC_000922.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1033284 mraY 895314 mraY Chlamydophila pneumoniae CWL029 phospho-N-acetylmuramoyl-pentapeptide- transferase NP_225095.1 1032235 D 115713 CDS NP_225096.1 15618810 895674 1033287..1034540 1 NC_000922.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 1034540 murD 895674 murD Chlamydophila pneumoniae CWL029 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase NP_225096.1 1033287 D 115713 CDS NP_225097.1 15618811 895323 1034543..1035244 1 NC_000922.1 muramidase 1035244 nlpD 895323 nlpD Chlamydophila pneumoniae CWL029 muramidase NP_225097.1 1034543 D 115713 CDS NP_225098.1 15618812 895302 1035263..1036420 1 NC_000922.1 cell division protein FtsW 1036420 ftsW 895302 ftsW Chlamydophila pneumoniae CWL029 cell division protein FtsW NP_225098.1 1035263 D 115713 CDS NP_225099.1 15618813 895672 1036326..1037399 1 NC_000922.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDP diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1037399 murG 895672 murG Chlamydophila pneumoniae CWL029 UDP diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase NP_225099.1 1036326 D 115713 CDS NP_225100.1 15618814 895305 1037409..1039838 1 NC_000922.1 catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine and catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase 1039838 murC/ddlA 895305 murC/ddlA Chlamydophila pneumoniae CWL029 bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase NP_225100.1 1037409 D 115713 CDS NP_225101.1 15618815 895673 complement(1039912..1040340) 1 NC_000922.1 hypothetical protein 1040340 895673 CPn0906 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225101.1 1039912 R 115713 CDS NP_225102.1 15618816 895340 complement(1040442..1040780) 1 NC_000922.1 divalent cation tolerance protein 1040780 cutA 895340 cutA Chlamydophila pneumoniae CWL029 divalent cation tolerance protein NP_225102.1 1040442 R 115713 CDS NP_225103.1 15618817 895671 complement(1040777..1041589) 1 NC_000922.1 hypothetical protein 1041589 895671 CPn0908 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225103.1 1040777 R 115713 CDS NP_225104.1 15618818 895293 1041637..1041969 1 NC_000922.1 sigma regulatory factor 1041969 rsbV_2 895293 rsbV_2 Chlamydophila pneumoniae CWL029 sigma regulatory factor NP_225104.1 1041637 D 115713 CDS NP_225105.1 15618819 895662 1041979..1043007 1 NC_000922.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 1043007 miaA 895662 miaA Chlamydophila pneumoniae CWL029 tRNA delta(2)-isopentenylpyrophosphate transferase NP_225105.1 1041979 D 115713 CDS NP_225106.1 15618820 895328 complement(1042982..1044043) 1 NC_000922.1 hypothetical protein 1044043 895328 CPn0911 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225106.1 1042982 R 115713 CDS NP_225107.1 15618821 895666 1044129..1045763 1 NC_000922.1 hypothetical protein 1045763 895666 CPn0912 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225107.1 1044129 D 115713 CDS NP_225108.1 15618822 895270 1045760..1045948 1 NC_000922.1 hypothetical protein 1045948 895270 CPn0913 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225108.1 1045760 D 115713 CDS NP_225109.1 15618823 895669 1045999..1046400 1 NC_000922.1 hypothetical protein 1046400 895669 CPn0914 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225109.1 1045999 D 115713 CDS NP_225110.1 15618824 895223 1046461..1046820 1 NC_000922.1 iojap superfamily protein 1046820 ybeB 895223 ybeB Chlamydophila pneumoniae CWL029 iojap superfamily protein NP_225110.1 1046461 D 115713 CDS NP_225111.1 15618825 895670 1046837..1048087 1 NC_000922.1 FabF, beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-ACP synthase 1048087 fabF 895670 fabF Chlamydophila pneumoniae CWL029 3-oxoacyl-ACP synthase NP_225111.1 1046837 D 115713 CDS NP_225112.1 15618826 895341 1048090..1048542 1 NC_000922.1 hydrolase/phosphatase-like protein 1048542 895341 CPn0917 Chlamydophila pneumoniae CWL029 hydrolase/phosphatase-like protein NP_225112.1 1048090 D 115713 CDS NP_225113.1 15618827 895310 complement(1048576..1049223) 1 NC_000922.1 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 1049223 ppa 895310 ppa Chlamydophila pneumoniae CWL029 inorganic pyrophosphatase NP_225113.1 1048576 R 115713 CDS NP_225114.1 15618828 895663 1049378..1050433 1 NC_000922.1 leucine dehydrogenase 1050433 ldh 895663 ldh Chlamydophila pneumoniae CWL029 leucine dehydrogenase NP_225114.1 1049378 D 115713 CDS NP_225115.1 15618829 895315 complement(1050428..1051405) 1 NC_000922.1 sulfite synthesis/biphosphate phosphatase 1051405 cysQ 895315 cysQ Chlamydophila pneumoniae CWL029 sulfite synthesis/biphosphate phosphatase NP_225115.1 1050428 R 115713 CDS NP_225116.1 15618830 895394 1051535..1052296 1 NC_000922.1 snglycerol-3-P acyltransferase 1052296 895394 CPn0921 Chlamydophila pneumoniae CWL029 snglycerol-3-P acyltransferase NP_225116.1 1051535 D 115713 CDS NP_225117.1 15618831 895665 1052314..1053930 1 NC_000922.1 Synthesizes thioester adducts of fatty acids enzymatically to the phosphopantetheine group of acyl carrier protein; long chain fatty acid--[acyl-carrier-protein] ligase 1053930 aas 895665 aas Chlamydophila pneumoniae CWL029 long chain fatty acid--[acyl-carrier-protein] ligase NP_225117.1 1052314 D 115713 CDS NP_225118.1 15618832 895329 1053984..1055096 1 NC_000922.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 1055096 bioF_1 895329 bioF_1 Chlamydophila pneumoniae CWL029 8-amino-7-oxononanoate synthase NP_225118.1 1053984 D 115713 CDS NP_225119.1 15618833 895667 complement(1055025..1057274) 1 NC_000922.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 1057274 priA 895667 priA Chlamydophila pneumoniae CWL029 primosome assembly protein PriA NP_225119.1 1055025 R 115713 CDS NP_225120.1 15618834 895274 complement(1057223..1057900) 1 NC_000922.1 hypothetical protein 1057900 895274 CPn0925 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225120.1 1057223 R 115713 CDS NP_225121.1 15618835 895661 1058060..1058560 1 NC_000922.1 thioredoxin 1058560 895661 CPn0926 Chlamydophila pneumoniae CWL029 thioredoxin NP_225121.1 1058060 D 115713 CDS NP_225122.1 15618836 895601 complement(1058667..1059809) 1 NC_000922.1 hypothetical protein 1059809 895601 CPn0927 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225122.1 1058667 R 115713 CDS NP_225123.1 15618837 895267 complement(1059881..1061008) 1 NC_000922.1 hypothetical protein 1061008 895267 CPn0928 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225123.1 1059881 R 115713 CDS NP_225124.1 15618838 895659 complement(1061183..1062292) 1 NC_000922.1 hypothetical protein 1062292 895659 CPn0929 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225124.1 1061183 R 115713 CDS NP_225125.1 15618839 895294 1062857..1063333 1 NC_000922.1 hypothetical protein 1063333 895294 CPn0930 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225125.1 1062857 D 115713 CDS NP_225126.1 15618840 895660 1064138..1065721 1 NC_000922.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 1065721 lysS 895660 lysS Chlamydophila pneumoniae CWL029 lysyl-tRNA synthetase NP_225126.1 1064138 D 115713 CDS NP_225127.1 15618841 895249 complement(1065718..1067142) 1 NC_000922.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1067142 cysS 895249 cysS Chlamydophila pneumoniae CWL029 cysteinyl-tRNA synthetase NP_225127.1 1065718 R 115713 CDS NP_225128.1 15618842 895657 1067535..1068581 1 NC_000922.1 disulfide bond isomerase 1068581 895657 CPn0933 Chlamydophila pneumoniae CWL029 disulfide bond isomerase NP_225128.1 1067535 D 115713 CDS NP_225129.1 15618843 895256 complement(1068523..1068942) 1 NC_000922.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 1068942 rnpA 895256 rnpA Chlamydophila pneumoniae CWL029 ribonuclease P NP_225129.1 1068523 R 115713 CDS NP_225130.1 15618844 895658 complement(1068954..1069091) 1 NC_000922.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 1069091 rpmH 895658 rpmH Chlamydophila pneumoniae CWL029 50S ribosomal protein L34 NP_225130.1 1068954 R 115713 CDS NP_225131.1 15618845 895250 1069336..1069473 1 NC_000922.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 1069473 rpmJ 895250 rpmJ Chlamydophila pneumoniae CWL029 50S ribosomal protein L36 NP_225131.1 1069336 D 115713 CDS NP_225132.1 15618846 895492 1069496..1069801 1 NC_000922.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 1069801 rpsN 895492 rpsN Chlamydophila pneumoniae CWL029 30S ribosomal protein S14 NP_225132.1 1069496 D 115713 CDS NP_225133.1 15618847 895656 complement(1069846..1070322) 1 NC_000922.1 leader peptide-periplasmic; hypothetical protein 1070322 895656 CPn0938 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225133.1 1069846 R 115713 CDS NP_225134.1 15618848 895550 1070728..1071198 1 NC_000922.1 hypothetical protein 1071198 895550 CPn0939 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225134.1 1070728 D 115713 CDS NP_225135.1 15618849 895526 complement(1071201..1073012) 1 NC_000922.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1073012 uvrC 895526 uvrC Chlamydophila pneumoniae CWL029 excinuclease ABC subunit C NP_225135.1 1071201 R 115713 CDS NP_225136.1 15618850 895642 complement(1073015..1075501) 1 NC_000922.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1075501 mutS 895642 mutS Chlamydophila pneumoniae CWL029 DNA mismatch repair protein MutS NP_225136.1 1073015 R 115713 CDS NP_225137.1 15618851 894685 1075985..1077757 1 NC_000922.1 synthesizes RNA primers at the replication forks; DNA primase 1077757 dnaG 894685 dnaG Chlamydophila pneumoniae CWL029 DNA primase NP_225137.1 1075985 D 115713 CDS NP_225138.1 15618852 895136 1077978..1078241 1 NC_000922.1 hypothetical protein 1078241 895136 CPn0943 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225138.1 1077978 D 115713 CDS NP_225139.1 15618853 895588 1078512..1079000 1 NC_000922.1 hypothetical protein 1079000 895588 CPn0944 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225139.1 1078512 D 115713 CDS NP_225140.1 15618854 895597 1079070..1079663 1 NC_000922.1 hypothetical protein 1079663 895597 CPn0945 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225140.1 1079070 D 115713 CDS NP_225141.1 15618855 895630 complement(1079742..1082786) 1 NC_000922.1 glycyl tRNA synthetase 1082786 glyQ 895630 glyQ Chlamydophila pneumoniae CWL029 glycyl tRNA synthetase NP_225141.1 1079742 R 115713 CDS NP_225142.1 15618856 894730 1083442..1084062 1 NC_000922.1 glycerol-3-P phosphatidyltransferase 1084062 pgsA_2 894730 pgsA_2 Chlamydophila pneumoniae CWL029 glycerol-3-P phosphatidyltransferase NP_225142.1 1083442 D 115713 CDS NP_225143.1 15618857 895529 complement(1084044..1085474) 1 NC_000922.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 1085474 glgA 895529 glgA Chlamydophila pneumoniae CWL029 glycogen synthase NP_225143.1 1084044 R 115713 CDS NP_225144.1 15618858 895638 1085929..1086486 1 NC_000922.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 1086486 ctc 895638 ctc Chlamydophila pneumoniae CWL029 50S ribosomal protein L25 NP_225144.1 1085929 D 115713 CDS NP_225145.1 15618859 895643 1086488..1087030 1 NC_000922.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 1087030 pth 895643 pth Chlamydophila pneumoniae CWL029 peptidyl-tRNA hydrolase NP_225145.1 1086488 D 115713 CDS NP_225146.1 15618860 895639 1087122..1087460 1 NC_000922.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 1087460 rpsF 895639 rpsF Chlamydophila pneumoniae CWL029 30S ribosomal protein S6 NP_225146.1 1087122 D 115713 CDS NP_225147.1 15618861 895637 1087478..1087726 1 NC_000922.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 1087726 rpsR 895637 rpsR Chlamydophila pneumoniae CWL029 30S ribosomal protein S18 NP_225147.1 1087478 D 115713 CDS NP_225148.1 15618862 895634 1087742..1088251 1 NC_000922.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 1088251 rplI 895634 rplI Chlamydophila pneumoniae CWL029 50S ribosomal protein L9 NP_225148.1 1087742 D 115713 CDS NP_225149.1 15618863 895635 1089560..1090912 1 NC_000922.1 hypothetical protein 1090912 895635 CPn0956 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225149.1 1089560 D 115713 CDS NP_225150.1 15618864 895636 complement(1090960..1093788) 1 NC_000922.1 insulinase/protease III 1093788 ide 895636 ide Chlamydophila pneumoniae CWL029 insulinase/protease III NP_225150.1 1090960 R 115713 CDS NP_225151.1 15618865 895640 complement(1093790..1094785) 1 NC_000922.1 glycerol-3-P acyltransferase 1094785 plsB 895640 plsB Chlamydophila pneumoniae CWL029 glycerol-3-P acyltransferase NP_225151.1 1093790 R 115713 CDS NP_225152.1 15618866 895623 complement(1094796..1096343) 1 NC_000922.1 axial filament protein 1096343 cafE 895623 cafE Chlamydophila pneumoniae CWL029 axial filament protein NP_225152.1 1094796 R 115713 CDS NP_225153.2 532524906 895632 1096578..1097105 1 NC_000922.1 hypothetical protein 1097105 895632 CPn0960 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225153.2 1096578 D 115713 CDS NP_225154.1 15618868 895629 1097118..1097300 1 NC_000922.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1097300 rpmF 895629 rpmF Chlamydophila pneumoniae CWL029 50S ribosomal protein L32 NP_225154.1 1097118 D 115713 CDS NP_225155.1 15618869 895631 1097316..1098278 1 NC_000922.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1098278 plsX 895631 plsX Chlamydophila pneumoniae CWL029 glycerol-3-phosphate acyltransferase PlsX NP_225155.1 1097316 D 115713 CDS NP_225156.1 15618870 895625 1098398..1103227 1 NC_000922.1 outer membrane protein D 1103227 pmp_21 895625 pmp_21 Chlamydophila pneumoniae CWL029 outer membrane protein D NP_225156.1 1098398 D 115713 CDS NP_225157.1 15618871 895628 complement(1103298..1104758) 1 NC_000922.1 hypothetical protein 1104758 895628 CPn0964 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225157.1 1103298 R 115713 CDS NP_225158.1 15618872 895627 complement(1104922..1106736) 1 NC_000922.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate; lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 1106736 lpxB 895627 lpxB Chlamydophila pneumoniae CWL029 lipid-A-disaccharide synthase NP_225158.1 1104922 R 115713 CDS NP_225159.1 15618873 895626 complement(1106745..1108037) 1 NC_000922.1 poly A polymerase 1108037 pcnB_2 895626 pcnB_2 Chlamydophila pneumoniae CWL029 poly A polymerase NP_225159.1 1106745 R 115713 CDS NP_225160.1 15618874 895620 1108512..1109888 1 NC_000922.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 1109888 glmM 895620 glmM Chlamydophila pneumoniae CWL029 phosphoglucosamine mutase NP_225160.1 1108512 D 115713 CDS NP_225161.1 15618875 895622 1109895..1111724 1 NC_000922.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 1111724 glmS 895622 glmS Chlamydophila pneumoniae CWL029 glucosamine--fructose-6-phosphate aminotransferase NP_225161.1 1109895 D 115713 CDS NP_225162.1 15618876 895619 1111812..1113002 1 NC_000922.1 tyrosine transporter 1113002 tyrP_1 895619 tyrP_1 Chlamydophila pneumoniae CWL029 tyrosine transporter NP_225162.1 1111812 D 115713 CDS NP_225163.1 15618877 895615 1113053..1113373 1 NC_000922.1 ABC transporter permease 1113373 yccA_1 895615 yccA_1 Chlamydophila pneumoniae CWL029 ABC transporter permease NP_225163.1 1113053 D 115713 CDS NP_225164.1 15618878 895618 1113461..1114651 1 NC_000922.1 tyrosine transporter 1114651 tyrP_2 895618 tyrP_2 Chlamydophila pneumoniae CWL029 tyrosine transporter NP_225164.1 1113461 D 115713 CDS NP_225165.1 15618879 895621 1114702..1115418 1 NC_000922.1 ABC transporter permease 1115418 yccA_2 895621 yccA_2 Chlamydophila pneumoniae CWL029 ABC transporter permease NP_225165.1 1114702 D 115713 CDS NP_225166.1 15618880 895610 complement(1115427..1116299) 1 NC_000922.1 cell division protein FtsY 1116299 ftsY 895610 ftsY Chlamydophila pneumoniae CWL029 cell division protein FtsY NP_225166.1 1115427 R 115713 CDS NP_225167.1 15618881 895617 1116370..1117530 1 NC_000922.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 1117530 sucC 895617 sucC Chlamydophila pneumoniae CWL029 succinyl-CoA synthetase subunit beta NP_225167.1 1116370 D 115713 CDS NP_225168.1 15618882 895616 1117544..1118425 1 NC_000922.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 1118425 sucD 895616 sucD Chlamydophila pneumoniae CWL029 succinyl-CoA synthetase subunit alpha NP_225168.1 1117544 D 115713 CDS NP_225169.1 15618883 895614 1119104..1119640 1 NC_000922.1 hypothetical protein 1119640 895614 CPn0975 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225169.1 1119104 D 115713 CDS NP_225170.1 15618884 895613 1120082..1121188 1 NC_000922.1 hypothetical protein 1121188 895613 CPn0976 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225170.1 1120082 D 115713 CDS NP_225171.1 15618885 895608 1121371..1122405 1 NC_000922.1 hypothetical protein 1122405 895608 CPn0977 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225171.1 1121371 D 115713 CDS NP_225172.1 15618886 895611 1122665..1123696 1 NC_000922.1 hypothetical protein 1123696 895611 CPn0978 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225172.1 1122665 D 115713 CDS NP_225173.1 15618887 895609 1123980..1125446 1 NC_000922.1 DO Serine protease 1125446 htrA 895609 htrA Chlamydophila pneumoniae CWL029 DO Serine protease NP_225173.1 1123980 D 115713 CDS NP_225174.1 15618888 895605 complement(1125501..1126982) 1 NC_000922.1 hypothetical protein 1126982 895605 CPn0980 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225174.1 1125501 R 115713 CDS NP_225175.1 15618889 895612 1127031..1129955 1 NC_000922.1 zinc metalloprotease 1129955 895612 CPn0981 Chlamydophila pneumoniae CWL029 zinc metalloprotease NP_225175.1 1127031 D 115713 CDS NP_225176.1 15618890 895604 complement(1129959..1131194) 1 NC_000922.1 hypothetical protein 1131194 yigN 895604 yigN Chlamydophila pneumoniae CWL029 hypothetical protein NP_225176.1 1129959 R 115713 CDS NP_225177.1 15618891 895602 complement(1131203..1132000) 1 NC_000922.1 glycerol-serine phosphatidyltransferase 1132000 pssA 895602 pssA Chlamydophila pneumoniae CWL029 glycerol-serine phosphatidyltransferase NP_225177.1 1131203 R 115713 CDS NP_225178.1 15618892 895606 1132379..1135513 1 NC_000922.1 catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1135513 nrdA 895606 nrdA Chlamydophila pneumoniae CWL029 ribonucleotide-diphosphate reductase subunit alpha NP_225178.1 1132379 D 115713 CDS NP_225179.1 15618893 895607 1135534..1136574 1 NC_000922.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 1136574 nrdB 895607 nrdB Chlamydophila pneumoniae CWL029 ribonucleotide-diphosphate reductase subunit beta NP_225179.1 1135534 D 115713 CDS NP_225180.1 15618894 895603 1136724..1137398 1 NC_000922.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 1137398 trmB 895603 trmB Chlamydophila pneumoniae CWL029 tRNA (guanine-N(7)-)-methyltransferase NP_225180.1 1136724 D 115713 CDS NP_225181.1 15618895 895518 1137516..1138118 1 NC_000922.1 YtgB-like rRNA methylase 1138118 ytgB_2 895518 ytgB_2 Chlamydophila pneumoniae CWL029 YtgB-like rRNA methylase NP_225181.1 1137516 D 115713 CDS NP_225182.1 15618896 895599 complement(1138072..1138986) 1 NC_000922.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 1138986 murB 895599 murB Chlamydophila pneumoniae CWL029 UDP-N-acetylenolpyruvoylglucosamine reductase NP_225182.1 1138072 R 115713 CDS NP_225183.1 15618897 895514 complement(1139013..1139495) 1 NC_000922.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 1139495 nusB 895514 nusB Chlamydophila pneumoniae CWL029 transcription antitermination protein NusB NP_225183.1 1139013 R 115713 CDS NP_225184.1 15618898 895598 1139883..1140443 1 NC_000922.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 1140443 infC 895598 infC Chlamydophila pneumoniae CWL029 translation initiation factor IF-3 NP_225184.1 1139883 D 115713 CDS NP_225185.1 15618899 895584 1140421..1140615 1 NC_000922.1 50S ribosomal protein L35 1140615 rpmI 895584 rpmI Chlamydophila pneumoniae CWL029 50S ribosomal protein L35 NP_225185.1 1140421 D 115713 CDS NP_225186.1 15618900 895510 1140634..1140999 1 NC_000922.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1140999 rplT 895510 rplT Chlamydophila pneumoniae CWL029 50S ribosomal protein L20 NP_225186.1 1140634 D 115713 CDS NP_225187.1 15618901 895511 1141014..1142033 1 NC_000922.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1142033 pheS 895511 pheS Chlamydophila pneumoniae CWL029 phenylalanyl-tRNA synthetase subunit alpha NP_225187.1 1141014 D 115713 CDS NP_225188.1 15618902 895507 1142398..1144443 1 NC_000922.1 hypothetical protein 1144443 895507 CPn0994 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225188.1 1142398 D 115713 CDS NP_225189.1 15618903 895496 complement(1144412..1145512) 1 NC_000922.1 hypothetical protein 1145512 895496 CPn0995 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225189.1 1144412 R 115713 CDS NP_225190.1 15618904 894650 complement(1145516..1146589) 1 NC_000922.1 hypothetical protein 1146589 894650 CPn0996 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225190.1 1145516 R 115713 CDS NP_225191.1 15618905 894796 1146708..1147667 1 NC_000922.1 PP-loop superfamily ATPase 1147667 mesJ 894796 mesJ Chlamydophila pneumoniae CWL029 PP-loop superfamily ATPase NP_225191.1 1146708 D 115713 CDS NP_225192.1 15618906 894677 1147855..1150587 1 NC_000922.1 ATP-dependent zinc protease 1150587 ftsH 894677 ftsH Chlamydophila pneumoniae CWL029 ATP-dependent zinc protease NP_225192.1 1147855 D 115713 CDS NP_225193.1 15618907 894682 complement(1150763..1152847) 1 NC_000922.1 polynucleotide phosphorylase 1152847 pnp 894682 pnp Chlamydophila pneumoniae CWL029 polynucleotide phosphorylase NP_225193.1 1150763 R 115713 CDS NP_225194.1 15618908 894686 complement(1152888..1153157) 1 NC_000922.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 1153157 rpsO 894686 rpsO Chlamydophila pneumoniae CWL029 30S ribosomal protein S15 NP_225194.1 1152888 R 115713 CDS NP_225195.1 15618909 895125 1153405..1153872 1 NC_000922.1 cytosine deaminase 1153872 yfhC 895125 yfhC Chlamydophila pneumoniae CWL029 cytosine deaminase NP_225195.1 1153405 D 115713 CDS NP_225196.1 15618910 894698 1153862..1154092 1 NC_000922.1 hypothetical protein 1154092 894698 CPn1002 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225196.1 1153862 D 115713 CDS NP_225197.1 15618911 895113 complement(1154089..1154796) 1 NC_000922.1 hypothetical protein 1154796 895113 CPn1003 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225197.1 1154089 R 115713 CDS NP_225198.1 15618912 894741 complement(1154876..1155397) 1 NC_000922.1 hypothetical protein 1155397 894741 CPn1004 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225198.1 1154876 R 115713 CDS NP_225199.1 15618913 894635 complement(1155412..1155933) 1 NC_000922.1 hypothetical protein 1155933 894635 CPn1005 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225199.1 1155412 R 115713 CDS NP_225200.1 15618914 894777 complement(1155987..1156472) 1 NC_000922.1 hypothetical protein 1156472 894777 CPn1006 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225200.1 1155987 R 115713 CDS NP_225201.1 15618915 894680 1156689..1156910 1 NC_000922.1 hypothetical protein 1156910 894680 CPn1007 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225201.1 1156689 D 115713 CDS NP_225202.1 15618916 895502 1156928..1158226 1 NC_000922.1 hypothetical protein 1158226 895502 CPn1008 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225202.1 1156928 D 115713 CDS NP_225203.1 15618917 894643 complement(1158183..1159058) 1 NC_000922.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; methionine aminopeptidase 1159058 map 894643 map Chlamydophila pneumoniae CWL029 methionine aminopeptidase NP_225203.1 1158183 R 115713 CDS NP_225204.1 15618918 895067 complement(1159064..1159672) 1 NC_000922.1 hypothetical protein 1159672 895067 CPn1010 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225204.1 1159064 R 115713 CDS NP_225206.1 15618920 895096 complement(1160418..1162193) 1 NC_000922.1 ABC transporter permease 1162193 yzeB 895096 yzeB Chlamydophila pneumoniae CWL029 ABC transporter permease NP_225206.1 1160418 R 115713 CDS NP_225207.1 15618921 894645 1162245..1163627 1 NC_000922.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 1163627 fumC 894645 fumC Chlamydophila pneumoniae CWL029 fumarate hydratase NP_225207.1 1162245 D 115713 CDS NP_225208.1 15618922 895048 complement(1163729..1165426) 1 NC_000922.1 sulfate transporter 1165426 ychM 895048 ychM Chlamydophila pneumoniae CWL029 sulfate transporter NP_225208.1 1163729 R 115713 CDS NP_225209.1 15618923 894636 1165634..1166896 1 NC_000922.1 possible IM protein; hypothetical protein 1166896 894636 CPn1015 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225209.1 1165634 D 115713 CDS NP_225210.1 15618924 894984 1167042..1168901 1 NC_000922.1 hypothetical protein 1168901 894984 CPn1016 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225210.1 1167042 D 115713 CDS NP_225211.1 15618925 895489 1169006..1169938 1 NC_000922.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1169938 ispH 895489 ispH Chlamydophila pneumoniae CWL029 4-hydroxy-3-methylbut-2-enyl diphosphate reductase NP_225211.1 1169006 D 115713 CDS NP_225212.1 15618926 895652 1169898..1170632 1 NC_000922.1 hypothetical protein 1170632 895652 CPn1018 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225212.1 1169898 D 115713 CDS NP_225213.1 15618927 894646 complement(1170635..1172128) 1 NC_000922.1 hypothetical protein 1172128 894646 CPn1019 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225213.1 1170635 R 115713 CDS NP_225214.1 15618928 894999 complement(1172147..1173679) 1 NC_000922.1 hypothetical protein 1173679 894999 CPn1020 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225214.1 1172147 R 115713 CDS NP_225215.1 15618929 894782 complement(1173695..1174213) 1 NC_000922.1 low calcium response protein H 1174213 lcrH_2 894782 lcrH_2 Chlamydophila pneumoniae CWL029 low calcium response protein H NP_225215.1 1173695 R 115713 CDS NP_225216.1 15618930 895477 complement(1174213..1175673) 1 NC_000922.1 hypothetical protein 1175673 895477 CPn1022 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225216.1 1174213 R 115713 CDS NP_225217.1 15618931 894707 1176035..1176334 1 NC_000922.1 hypothetical protein 1176334 894707 CPn1023 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225217.1 1176035 D 115713 CDS NP_225218.1 15618932 895217 complement(1176331..1177236) 1 NC_000922.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 1177236 xerD 895217 xerD Chlamydophila pneumoniae CWL029 site-specific tyrosine recombinase XerD NP_225218.1 1176331 R 115713 CDS NP_225219.1 15618933 895490 1177302..1178882 1 NC_000922.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 1178882 pgi 895490 pgi Chlamydophila pneumoniae CWL029 glucose-6-phosphate isomerase NP_225219.1 1177302 D 115713 CDS NP_225220.1 15618934 895653 1178997..1179140 1 NC_000922.1 late transcription unit A protein 1179140 895653 CPn1026 Chlamydophila pneumoniae CWL029 late transcription unit A protein NP_225220.1 1178997 D 115713 CDS NP_225221.1 15618935 894715 1179175..1180758 1 NC_000922.1 hypothetical protein 1180758 894715 CPn1027 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225221.1 1179175 D 115713 CDS NP_225222.1 15618936 894763 1181016..1182002 1 NC_000922.1 catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase 1182002 mdhC 894763 mdhC Chlamydophila pneumoniae CWL029 malate dehydrogenase NP_225222.1 1181016 D 115713 CDS NP_225223.1 15618937 894720 1182008..1182847 1 NC_000922.1 hypothetical protein 1182847 894720 CPn1029 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225223.1 1182008 D 115713 CDS NP_225224.1 15618938 894761 complement(1182840..1183886) 1 NC_000922.1 D-amino acid dehyrogenase 1183886 894761 CPn1030 Chlamydophila pneumoniae CWL029 D-amino acid dehyrogenase NP_225224.1 1182840 R 115713 CDS NP_225225.1 15618939 894716 complement(1184095..1185552) 1 NC_000922.1 arginine/ornithine antiporter 1185552 arcD 894716 arcD Chlamydophila pneumoniae CWL029 arginine/ornithine antiporter NP_225225.1 1184095 R 115713 CDS NP_225226.1 15618940 895497 complement(1185563..1186150) 1 NC_000922.1 hypothetical protein 1186150 895497 CPn1032 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225226.1 1185563 R 115713 CDS NP_225227.1 15618941 895500 complement(1186184..1187500) 1 NC_000922.1 hypothetical protein 1187500 895500 CPn1033 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225227.1 1186184 R 115713 CDS NP_225228.1 15618942 894766 complement(1187729..1188517) 1 NC_000922.1 hypothetical protein 1188517 894766 CPn1034 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225228.1 1187729 R 115713 CDS NP_225229.1 15618943 894704 complement(1188567..1190000) 1 NC_000922.1 AroDE; bifunctional enzyme; can convert 3-dehydroquinate to 3-dehydroshkimate and then to shikimate; involved in the synthesis of aromatic amino acids and other metabolites; type I 3-DHQase; bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase 1190000 aroDE 894704 aroDE Chlamydophila pneumoniae CWL029 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase NP_225229.1 1188567 R 115713 CDS NP_225230.1 15618944 894866 complement(1189981..1191135) 1 NC_000922.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 1191135 aroB 894866 aroB Chlamydophila pneumoniae CWL029 3-dehydroquinate synthase NP_225230.1 1189981 R 115713 CDS NP_225231.1 15618945 894701 complement(1191120..1192199) 1 NC_000922.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1192199 aroC 894701 aroC Chlamydophila pneumoniae CWL029 chorismate synthase NP_225231.1 1191120 R 115713 CDS NP_225232.1 15618946 895565 complement(1192196..1192726) 1 NC_000922.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 1192726 aroL 895565 aroL Chlamydophila pneumoniae CWL029 shikimate kinase NP_225232.1 1192196 R 115713 CDS NP_225233.1 15618947 894689 complement(1192662..1193999) 1 NC_000922.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1193999 aroA 894689 aroA Chlamydophila pneumoniae CWL029 3-phosphoshikimate 1-carboxyvinyltransferase NP_225233.1 1192662 R 115713 CDS NP_225234.1 15618948 895064 complement(1194070..1194741) 1 NC_000922.1 hypothetical protein 1194741 895064 CPn1040 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225234.1 1194070 R 115713 CDS NP_225235.1 15618949 894723 complement(1194723..1195994) 1 NC_000922.1 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1195994 bioA 894723 bioA Chlamydophila pneumoniae CWL029 adenosylmethionine-8-amino-7-oxononanoate aminotransferase NP_225235.1 1194723 R 115713 CDS NP_225236.1 15618950 895031 complement(1195931..1196590) 1 NC_000922.1 dethiobiotin synthetase 1196590 bioD 895031 bioD Chlamydophila pneumoniae CWL029 dethiobiotin synthetase NP_225236.1 1195931 R 115713 CDS NP_225237.1 15618951 895478 complement(1196569..1197717) 1 NC_000922.1 oxononanoate synthase 1197717 bioF_2 895478 bioF_2 Chlamydophila pneumoniae CWL029 oxononanoate synthase NP_225237.1 1196569 R 115713 CDS NP_225238.1 15618952 895651 complement(1197696..1198691) 1 NC_000922.1 biotin synthase 1198691 bioB 895651 bioB Chlamydophila pneumoniae CWL029 biotin synthase NP_225238.1 1197696 R 115713 CDS NP_225239.1 15618953 894717 complement(1198898..1199590) 1 NC_000922.1 hypothetical protein 1199590 894717 CPn1045 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225239.1 1198898 R 115713 CDS NP_225240.1 15618954 894768 complement(1199587..1200675) 1 NC_000922.1 catalyzes the formation of tyrosine, dihydroxyphenylalanine, and 5-hydroxytryptophan from phenylalanine, tyrosine, and tryptophan respectively; aromatic amino acid hydroxylase 1200675 phhA 894768 phhA Chlamydophila pneumoniae CWL029 aromatic amino acid hydroxylase NP_225240.1 1199587 R 115713 CDS NP_225241.1 15618955 894756 1200552..1201346 1 NC_000922.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 1201346 dapB 894756 dapB Chlamydophila pneumoniae CWL029 dihydrodipicolinate reductase NP_225241.1 1200552 D 115713 CDS NP_225242.1 15618956 894684 1201606..1202607 1 NC_000922.1 catalyzes the formation of aspartate semialdehyde from aspartyl phosphate; aspartate-semialdehyde dehydrogenase 1202607 asd 894684 asd Chlamydophila pneumoniae CWL029 aspartate-semialdehyde dehydrogenase NP_225242.1 1201606 D 115713 CDS NP_225243.1 15618957 895115 1202595..1203917 1 NC_000922.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; aspartate kinase 1203917 lysC 895115 lysC Chlamydophila pneumoniae CWL029 aspartate kinase NP_225243.1 1202595 D 115713 CDS NP_225244.1 15618958 894676 1203926..1204801 1 NC_000922.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1204801 dapA 894676 dapA Chlamydophila pneumoniae CWL029 dihydrodipicolinate synthase NP_225244.1 1203926 D 115713 CDS NP_225245.1 15618959 895366 1204962..1205273 1 NC_000922.1 hypothetical protein 1205273 895366 CPn1051 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225245.1 1204962 D 115713 CDS NP_225246.1 15618960 895647 1205417..1206172 1 NC_000922.1 hypothetical protein 1206172 895647 CPn1052 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225246.1 1205417 D 115713 CDS NP_225247.1 15618961 895303 1206153..1206704 1 NC_000922.1 hypothetical protein 1206704 895303 CPn1053 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225247.1 1206153 D 115713 CDS NP_225248.1 15618962 895649 1207034..1209469 1 NC_000922.1 hypothetical protein 1209469 895649 CPn1054 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225248.1 1207034 D 115713 CDS NP_225249.1 15618963 894674 1209694..1210524 1 NC_000922.1 hypothetical protein 1210524 894674 CPn1055 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225249.1 1209694 D 115713 CDS NP_225250.1 15618964 894711 1210527..1211231 1 NC_000922.1 hypothetical protein 1211231 894711 CPn1056 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225250.1 1210527 D 115713 CDS NP_225251.1 15618965 895586 1211497..1213599 1 NC_000922.1 hypothetical protein 1213599 895586 CPn1057 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225251.1 1211497 D 115713 CDS NP_225252.1 15618966 894709 1213748..1214839 1 NC_000922.1 hypothetical protein 1214839 894709 CPn1058 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225252.1 1213748 D 115713 CDS NP_225253.1 15618967 895577 1214848..1215681 1 NC_000922.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1215681 ksgA 895577 ksgA Chlamydophila pneumoniae CWL029 dimethyladenosine transferase NP_225253.1 1214848 D 115713 CDS NP_225254.1 15618968 894783 complement(1215724..1217658) 1 NC_000922.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1217658 tktB_2 894783 tktB_2 Chlamydophila pneumoniae CWL029 1-deoxy-D-xylulose-5-phosphate synthase NP_225254.1 1215724 R 115713 CDS NP_225255.1 15618969 894867 complement(1217663..1217920) 1 NC_000922.1 hypothetical protein 1217920 894867 CPn1061 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225255.1 1217663 R 115713 CDS YP_008470951.1 532524907 16665122 complement(1217925..1218152) 1 NC_000922.1 exodeoxyribonuclease VII small subunit 1218152 16665122 CPn1060a Chlamydophila pneumoniae CWL029 exodeoxyribonuclease VII small subunit YP_008470951.1 1217925 R 115713 CDS NP_225256.1 15618970 894865 complement(1218156..1219820) 1 NC_000922.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1219820 xseA 894865 xseA Chlamydophila pneumoniae CWL029 exodeoxyribonuclease VII large subunit NP_225256.1 1218156 R 115713 CDS NP_225257.1 15618971 894778 1219951..1220715 1 NC_000922.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 1220715 tpiA 894778 tpiA Chlamydophila pneumoniae CWL029 triosephosphate isomerase NP_225257.1 1219951 D 115713 CDS NP_225258.1 15618972 894713 1220719..1220898 1 NC_000922.1 hypothetical protein 1220898 894713 CPn1064 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225258.1 1220719 D 115713 CDS NP_225259.1 15618973 895216 complement(1220925..1221095) 1 NC_000922.1 hypothetical protein 1221095 895216 CPn1065 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225259.1 1220925 R 115713 CDS NP_225260.1 15618974 894748 1221135..1221491 1 NC_000922.1 preprotein translocase subunit SecG 1221491 secG 894748 secG Chlamydophila pneumoniae CWL029 preprotein translocase subunit SecG NP_225260.1 1221135 D 115713 CDS NP_225261.1 15618975 894864 1221735..1222295 1 NC_000922.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1222295 def 894864 def Chlamydophila pneumoniae CWL029 peptide deformylase NP_225261.1 1221735 D 115713 CDS NP_225262.1 15618976 894683 complement(1222362..1223258) 1 NC_000922.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease HIII 1223258 rnhB_2 894683 rnhB_2 Chlamydophila pneumoniae CWL029 ribonuclease HIII NP_225262.1 1222362 R 115713 CDS NP_225263.1 15618977 894722 1223513..1223944 1 NC_000922.1 HTH transcriptional regulator 1223944 yfgA 894722 yfgA Chlamydophila pneumoniae CWL029 HTH transcriptional regulator NP_225263.1 1223513 D 115713 CDS NP_225264.1 15618978 895291 complement(1224141..1225511) 1 NC_000922.1 hypothetical protein 1225511 895291 CPn1070 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225264.1 1224141 R 115713 CDS NP_225265.1 15618979 894728 complement(1225882..1227324) 1 NC_000922.1 hypothetical protein 1227324 894728 CPn1071 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225265.1 1225882 R 115713 CDS NP_225266.1 15618980 895545 1227969..1228838 1 NC_000922.1 hypothetical protein 1228838 895545 CPn1072 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225266.1 1227969 D 115713 CDS NP_225267.1 15618981 894694 1229011..1229835 1 NC_000922.1 hypothetical protein 1229835 894694 CPn1073 Chlamydophila pneumoniae CWL029 hypothetical protein NP_225267.1 1229011 D 115713 CDS