-- dump date 20140619_040428 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 115713000001 SEQ_END SEQ_END NC_000922.1 1230230 1230230 DR NC_000922.1; contig end 1230230..1230230 Chlamydophila pneumoniae CWL029 NP_224214.1 CDS CPn0001 NC_000922.1 1 282 R hypothetical protein complement(1..282) Chlamydophila pneumoniae CWL029 895144 NP_224215.1 CDS gatC NC_000922.1 573 878 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 573..878 Chlamydophila pneumoniae CWL029 895049 NP_224216.1 CDS gatA NC_000922.1 895 2373 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 895..2373 Chlamydophila pneumoniae CWL029 894833 NP_224217.1 CDS gatB NC_000922.1 2370 3836 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 2370..3836 Chlamydophila pneumoniae CWL029 895027 NP_224218.1 CDS pmp_1 NC_000922.1 4127 6895 D hypothetical protein 4127..6895 Chlamydophila pneumoniae CWL029 894759 NP_224219.1 CDS CPn0006 NC_000922.1 7138 7293 R hypothetical protein complement(7138..7293) Chlamydophila pneumoniae CWL029 895024 NP_224220.1 CDS CPn0007 NC_000922.1 7605 10499 D hypothetical protein 7605..10499 Chlamydophila pneumoniae CWL029 894953 NP_224221.1 CDS CPn0008 NC_000922.1 10975 11688 D hypothetical protein 10975..11688 Chlamydophila pneumoniae CWL029 894966 NP_224222.1 CDS CPn0009 NC_000922.1 11815 13122 D hypothetical protein 11815..13122 Chlamydophila pneumoniae CWL029 895206 NP_224223.1 CDS CPn0010 NC_000922.1 13435 14328 D hypothetical protein 13435..14328 Chlamydophila pneumoniae CWL029 894991 NP_224226.1 CDS CPn0012 NC_000922.1 16644 18215 D hypothetical protein 16644..18215 Chlamydophila pneumoniae CWL029 894938 NP_224227.1 CDS pmp_2 NC_000922.1 18584 21109 D hypothetical protein 18584..21109 Chlamydophila pneumoniae CWL029 894895 NP_224228.1 CDS CPn0020 NC_000922.1 30600 32687 R leader peptide: outer membrane; hypothetical protein complement(30600..32687) Chlamydophila pneumoniae CWL029 894965 NP_224229.1 CDS CPn0021 NC_000922.1 32704 34410 R leader peptide; hypothetical protein complement(32704..34410) Chlamydophila pneumoniae CWL029 895159 NP_224230.1 CDS maf NC_000922.1 34392 34982 R Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein complement(34392..34982) Chlamydophila pneumoniae CWL029 895108 NP_224231.1 CDS yjjK NC_000922.1 35011 36603 R ABC transporter ATPase complement(35011..36603) Chlamydophila pneumoniae CWL029 895045 NP_224232.1 CDS xerC NC_000922.1 36658 37596 R site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC complement(36658..37596) Chlamydophila pneumoniae CWL029 895001 NP_224233.1 CDS atsA NC_000922.1 37681 38604 R member of metallo-beta-lactamase; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z complement(37681..38604) Chlamydophila pneumoniae CWL029 894854 NP_224234.1 CDS CPn0026 NC_000922.1 38759 39625 R hypothetical protein complement(38759..39625) Chlamydophila pneumoniae CWL029 894967 NP_224235.1 CDS lon NC_000922.1 39775 42234 R Lon ATP-dependent protease complement(39775..42234) Chlamydophila pneumoniae CWL029 894928 NP_224236.1 CDS CPn0028 NC_000922.1 42540 43325 R hypothetical protein complement(42540..43325) Chlamydophila pneumoniae CWL029 895157 NP_224237.1 CDS CPn0029 NC_000922.1 43387 43755 R hypothetical protein complement(43387..43755) Chlamydophila pneumoniae CWL029 895163 NP_224238.1 CDS gcp_1 NC_000922.1 43891 44532 D O-sialoglycoprotein endopeptidase 43891..44532 Chlamydophila pneumoniae CWL029 895179 NP_224239.1 CDS rpsU NC_000922.1 44711 44887 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 44711..44887 Chlamydophila pneumoniae CWL029 895005 NP_224240.1 CDS dnaJ NC_000922.1 44923 46101 D chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ 44923..46101 Chlamydophila pneumoniae CWL029 895202 NP_224241.1 CDS pdhA/pdhB NC_000922.1 46138 48174 D (pyruvate) oxoisovalerate dehydrogenase subunits alpha and beta 46138..48174 Chlamydophila pneumoniae CWL029 895207 NP_224242.1 CDS CPn0034 NC_000922.1 48207 49457 R hypothetical protein complement(48207..49457) Chlamydophila pneumoniae CWL029 894700 NP_224243.1 CDS CPn0035 NC_000922.1 49566 51029 R hypothetical protein complement(49566..51029) Chlamydophila pneumoniae CWL029 895152 NP_224244.1 CDS CPn0036 NC_000922.1 51002 51799 D hypothetical protein 51002..51799 Chlamydophila pneumoniae CWL029 895191 NP_224245.1 CDS ptsH NC_000922.1 51792 52118 D PTS system phosphocarrier protein Hpr 51792..52118 Chlamydophila pneumoniae CWL029 894828 NP_224246.1 CDS ptsI NC_000922.1 52119 53834 D PTS system PEP phosphotransferase 52119..53834 Chlamydophila pneumoniae CWL029 895213 NP_224247.1 CDS ybaB NC_000922.1 53960 54250 R hypothetical protein complement(53960..54250) Chlamydophila pneumoniae CWL029 894808 NP_224248.1 CDS dnaX_1 NC_000922.1 54315 55643 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma/tau complement(54315..55643) Chlamydophila pneumoniae CWL029 894835 NP_224249.1 CDS CPn0041 NC_000922.1 55996 57345 D hypothetical protein 55996..57345 Chlamydophila pneumoniae CWL029 894876 NP_224250.1 CDS CPn0042 NC_000922.1 57403 58185 D hypothetical protein 57403..58185 Chlamydophila pneumoniae CWL029 894882 NP_224251.1 CDS CPn0043 NC_000922.1 58447 60375 D hypothetical protein 58447..60375 Chlamydophila pneumoniae CWL029 894819 NP_224252.1 CDS CPn0044 NC_000922.1 60419 60781 D hypothetical protein 60419..60781 Chlamydophila pneumoniae CWL029 894896 NP_224255.1 CDS CPn0047 NC_000922.1 63455 63655 D hypothetical protein 63455..63655 Chlamydophila pneumoniae CWL029 894956 NP_224256.1 CDS yqfF NC_000922.1 63687 65804 D hypothetical protein 63687..65804 Chlamydophila pneumoniae CWL029 895003 NP_224257.1 CDS CPn0049 NC_000922.1 65814 66296 R hypothetical protein complement(65814..66296) Chlamydophila pneumoniae CWL029 895593 NP_224258.1 CDS CPn0050 NC_000922.1 66496 66813 R hypothetical protein complement(66496..66813) Chlamydophila pneumoniae CWL029 894989 NP_224259.1 CDS CPn0051 NC_000922.1 66833 67114 D hypothetical protein 66833..67114 Chlamydophila pneumoniae CWL029 894742 NP_224260.1 CDS hemC NC_000922.1 67301 68005 R transformation of prophobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase complement(67301..68005) Chlamydophila pneumoniae CWL029 895060 NP_224261.1 CDS sms NC_000922.1 67983 69344 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(67983..69344) Chlamydophila pneumoniae CWL029 895591 NP_224262.1 CDS rnc NC_000922.1 69310 70023 R cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III complement(69310..70023) Chlamydophila pneumoniae CWL029 895023 NP_224263.1 CDS CPn0055 NC_000922.1 70129 70593 D hypothetical protein 70129..70593 Chlamydophila pneumoniae CWL029 894988 NP_224264.1 CDS mrsA NC_000922.1 70953 72749 D phosphomannomutase 70953..72749 Chlamydophila pneumoniae CWL029 894757 NP_224265.1 CDS sodM NC_000922.1 72934 73557 D superoxide dismutase 72934..73557 Chlamydophila pneumoniae CWL029 894772 NP_224266.1 CDS accD NC_000922.1 73639 74565 D catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 73639..74565 Chlamydophila pneumoniae CWL029 895132 NP_224267.1 CDS dut NC_000922.1 74616 75053 D catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 74616..75053 Chlamydophila pneumoniae CWL029 894712 NP_224268.1 CDS ptsN_1 NC_000922.1 75055 75531 D PTS system transporter subunit IIA 75055..75531 Chlamydophila pneumoniae CWL029 894746 NP_224269.1 CDS ptsN_2 NC_000922.1 75534 76211 D fused PTS system transporter subunit IIA/HTH DNA-binding domain-containing protein 75534..76211 Chlamydophila pneumoniae CWL029 894781 NP_224270.1 CDS CPn0062 NC_000922.1 76308 77693 D hypothetical protein 76308..77693 Chlamydophila pneumoniae CWL029 895032 NP_224271.1 CDS CPn0063 NC_000922.1 78112 78270 D hypothetical protein 78112..78270 Chlamydophila pneumoniae CWL029 894929 NP_224272.1 CDS CPn0064 NC_000922.1 78346 78579 D hypothetical protein 78346..78579 Chlamydophila pneumoniae CWL029 895021 NP_224273.1 CDS CPn0065 NC_000922.1 78924 80654 D hypothetical protein 78924..80654 Chlamydophila pneumoniae CWL029 894941 NP_224274.1 CDS CPn0066 NC_000922.1 80925 82658 D hypothetical protein 80925..82658 Chlamydophila pneumoniae CWL029 894745 NP_224275.1 CDS CPn0067 NC_000922.1 82953 84056 D hypothetical protein 82953..84056 Chlamydophila pneumoniae CWL029 895581 NP_224276.1 CDS CPn0068 NC_000922.1 84328 84903 R hypothetical protein complement(84328..84903) Chlamydophila pneumoniae CWL029 894821 NP_224277.1 CDS CPn0069 NC_000922.1 85236 87089 D hypothetical protein 85236..87089 Chlamydophila pneumoniae CWL029 895590 NP_224279.1 CDS CPn0071 NC_000922.1 87596 88045 R hypothetical protein complement(87596..88045) Chlamydophila pneumoniae CWL029 895569 NP_224280.1 CDS CPn0072 NC_000922.1 88054 89061 R hypothetical protein complement(88054..89061) Chlamydophila pneumoniae CWL029 895552 NP_224281.1 CDS infA NC_000922.1 89356 89577 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 89356..89577 Chlamydophila pneumoniae CWL029 894930 NP_224282.1 CDS tuf NC_000922.1 89774 90958 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 89774..90958 Chlamydophila pneumoniae CWL029 894749 NP_224283.1 CDS secE NC_000922.1 91102 91353 D forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 91102..91353 Chlamydophila pneumoniae CWL029 894699 NP_224284.1 CDS nusG NC_000922.1 91358 91906 D Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 91358..91906 Chlamydophila pneumoniae CWL029 894692 NP_224285.1 CDS rplK NC_000922.1 92013 92438 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 92013..92438 Chlamydophila pneumoniae CWL029 895525 NP_224286.1 CDS rplA NC_000922.1 92465 93163 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 92465..93163 Chlamydophila pneumoniae CWL029 894779 NP_224287.1 CDS rplJ NC_000922.1 93179 93691 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 93179..93691 Chlamydophila pneumoniae CWL029 894706 NP_224288.1 CDS rplL NC_000922.1 93735 94124 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 93735..94124 Chlamydophila pneumoniae CWL029 895576 NP_224289.1 CDS rpoB NC_000922.1 94261 98019 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 94261..98019 Chlamydophila pneumoniae CWL029 894794 NP_224290.1 CDS rpoC NC_000922.1 98043 102224 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 98043..102224 Chlamydophila pneumoniae CWL029 894980 NP_224291.1 CDS tal NC_000922.1 102332 103315 D Maintains the balance of metabolites in the pentose-phosphate pathway; transaldolase B 102332..103315 Chlamydophila pneumoniae CWL029 895561 NP_224292.1 CDS CPn0084 NC_000922.1 103362 103754 D ferredoxin 103362..103754 Chlamydophila pneumoniae CWL029 895547 NP_224293.1 CDS CPn0085 NC_000922.1 103763 104506 R hypothetical protein complement(103763..104506) Chlamydophila pneumoniae CWL029 894691 NP_224294.1 CDS atpE NC_000922.1 104904 105530 D produces ATP from ADP in the presence of a proton gradient across the membrane; the E subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit E 104904..105530 Chlamydophila pneumoniae CWL029 894752 NP_224295.1 CDS CPn0087 NC_000922.1 105579 106379 D hypothetical protein 105579..106379 Chlamydophila pneumoniae CWL029 894862 NP_224296.1 CDS atpA NC_000922.1 106373 108148 D produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit A 106373..108148 Chlamydophila pneumoniae CWL029 895697 NP_224297.1 CDS atpB NC_000922.1 108153 109469 D produces ATP from ADP in the presence of a proton gradient across the membrane; the B subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit B 108153..109469 Chlamydophila pneumoniae CWL029 895698 NP_224298.1 CDS atpD NC_000922.1 109454 110083 D produces ATP from ADP in the presence of a proton gradient across the membrane; the D subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit D 109454..110083 Chlamydophila pneumoniae CWL029 895695 NP_224299.1 CDS atpI NC_000922.1 110074 112056 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I is part of the membrane proton channel.; V-type ATP synthase subunit I 110074..112056 Chlamydophila pneumoniae CWL029 895696 NP_224300.1 CDS atpK NC_000922.1 112151 112576 D produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits; V-type ATP synthase subunit K 112151..112576 Chlamydophila pneumoniae CWL029 895702 NP_224301.1 CDS CPn0093 NC_000922.1 112509 113018 D hypothetical protein 112509..113018 Chlamydophila pneumoniae CWL029 895701 NP_224302.1 CDS valS NC_000922.1 113152 115974 D valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 113152..115974 Chlamydophila pneumoniae CWL029 895699 NP_224303.2 CDS pknD NC_000922.1 115995 118793 D PknD; responsible for phosphorylation of proteins on serine and threonine residues; similar to eukaryotic Ser/Thr kinases; in Chlamydia trachomatis itseems to interact with Pkn1, another serine/threonine protein kinase; serine/threonine protein kinase 115995..118793 Chlamydophila pneumoniae CWL029 895704 NP_224304.1 CDS uvrA NC_000922.1 118834 124314 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(118834..124314) Chlamydophila pneumoniae CWL029 895700 NP_224305.1 CDS pyk NC_000922.1 124555 126009 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 124555..126009 Chlamydophila pneumoniae CWL029 895703 NP_224306.1 CDS htrB NC_000922.1 126088 127491 R Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase complement(126088..127491) Chlamydophila pneumoniae CWL029 895705 YP_008470949.1 CDS CPn0098a NC_000922.1 127544 127843 R hypothetical protein complement(127544..127843) Chlamydophila pneumoniae CWL029 16665121 NP_224308.1 CDS CPn0100 NC_000922.1 127879 129141 R hypothetical protein complement(127879..129141) Chlamydophila pneumoniae CWL029 895711 NP_224309.1 CDS ybbP NC_000922.1 129138 129932 R hypothetical protein complement(129138..129932) Chlamydophila pneumoniae CWL029 895709 NP_224310.1 CDS cydA NC_000922.1 130123 131469 D cytochrome oxidase subunit I 130123..131469 Chlamydophila pneumoniae CWL029 895707 NP_224311.1 CDS cydB NC_000922.1 131480 132514 D cytochrome oxidase subunit II 131480..132514 Chlamydophila pneumoniae CWL029 895706 NP_224312.1 CDS CPn0104 NC_000922.1 132673 133875 R hypothetical protein complement(132673..133875) Chlamydophila pneumoniae CWL029 895710 NP_224313.1 CDS CPn0105 NC_000922.1 134026 134847 R hypothetical protein complement(134026..134847) Chlamydophila pneumoniae CWL029 894765 NP_224314.1 CDS phoH NC_000922.1 135091 136377 D ATPase 135091..136377 Chlamydophila pneumoniae CWL029 894755 NP_224315.1 CDS CPn0107 NC_000922.1 136389 137162 R hypothetical protein complement(136389..137162) Chlamydophila pneumoniae CWL029 895573 NP_224316.1 CDS CPn0108 NC_000922.1 137300 137857 R hypothetical protein complement(137300..137857) Chlamydophila pneumoniae CWL029 894739 NP_224317.1 CDS ileS NC_000922.1 138655 141786 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase 138655..141786 Chlamydophila pneumoniae CWL029 894633 NP_224318.1 CDS lepB NC_000922.1 141824 143734 R signal peptidase I complement(141824..143734) Chlamydophila pneumoniae CWL029 895567 NP_224319.1 CDS CPn0111 NC_000922.1 143931 144686 R hypothetical protein complement(143931..144686) Chlamydophila pneumoniae CWL029 895499 NP_224320.1 CDS rpmE2 NC_000922.1 144767 145096 D RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 144767..145096 Chlamydophila pneumoniae CWL029 895527 NP_224321.1 CDS prfA NC_000922.1 145335 146408 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 145335..146408 Chlamydophila pneumoniae CWL029 895574 NP_224322.1 CDS hemK NC_000922.1 146398 147264 D HemK; PrmC; transfers a methyl group from S-adenosyl-methionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB possibly stimulating release of completed polypeptide chains; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 146398..147264 Chlamydophila pneumoniae CWL029 895047 NP_224323.1 CDS ffh NC_000922.1 147279 148625 D signal recognition particle GTPase 147279..148625 Chlamydophila pneumoniae CWL029 895065 NP_224324.1 CDS rpsP NC_000922.1 148616 148975 D binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 148616..148975 Chlamydophila pneumoniae CWL029 895176 NP_224325.1 CDS trmD NC_000922.1 148989 150074 D methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; Chlamydial proteins show a C-terminal extension of unknown function; tRNA (guanine-N(1)-)-methyltransferase 148989..150074 Chlamydophila pneumoniae CWL029 894638 NP_224326.1 CDS rplS NC_000922.1 150102 150467 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 150102..150467 Chlamydophila pneumoniae CWL029 894818 NP_224327.1 CDS rnhB NC_000922.1 150523 151167 D RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 150523..151167 Chlamydophila pneumoniae CWL029 894649 NP_224328.1 CDS gmk NC_000922.1 151164 151781 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 151164..151781 Chlamydophila pneumoniae CWL029 895034 NP_224329.1 CDS CPn0121 NC_000922.1 151778 152071 D hypothetical protein 151778..152071 Chlamydophila pneumoniae CWL029 895570 NP_224330.1 CDS metG NC_000922.1 152071 153726 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 152071..153726 Chlamydophila pneumoniae CWL029 894667 NP_224331.1 CDS recD_1 NC_000922.1 153771 155969 R exodeoxyribonuclease V subunit alpha complement(153771..155969) Chlamydophila pneumoniae CWL029 894806 NP_224332.1 CDS CPn0124 NC_000922.1 156614 158071 D hypothetical protein 156614..158071 Chlamydophila pneumoniae CWL029 895197 NP_224333.1 CDS CPn0125 NC_000922.1 158096 158608 D hypothetical protein 158096..158608 Chlamydophila pneumoniae CWL029 895053 NP_224334.1 CDS CPn0126 NC_000922.1 158809 161088 D hypothetical protein 158809..161088 Chlamydophila pneumoniae CWL029 895564 NP_224335.1 CDS ytfF NC_000922.1 161127 162143 R cationic amino acid transporter complement(161127..162143) Chlamydophila pneumoniae CWL029 894960 NP_224336.1 CDS CPn0128 NC_000922.1 162277 163056 D biotin--protein ligase 162277..163056 Chlamydophila pneumoniae CWL029 894640 NP_224339.1 CDS CPn0131 NC_000922.1 164549 165583 D hypothetical protein 164549..165583 Chlamydophila pneumoniae CWL029 895120 NP_224340.1 CDS CPn0132 NC_000922.1 165587 166564 D hypothetical protein 165587..166564 Chlamydophila pneumoniae CWL029 894834 NP_224341.1 CDS CPn0133 NC_000922.1 166561 167334 R hypothetical protein complement(166561..167334) Chlamydophila pneumoniae CWL029 894804 NP_224342.1 CDS groEL NC_000922.1 167464 169098 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GorEL complement(167464..169098) Chlamydophila pneumoniae CWL029 894660 NP_224343.1 CDS groES NC_000922.1 169140 169448 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(169140..169448) Chlamydophila pneumoniae CWL029 894733 NP_224344.1 CDS pepF NC_000922.1 169566 171401 R oligopeptidase complement(169566..171401) Chlamydophila pneumoniae CWL029 894981 NP_224345.1 CDS ybgI NC_000922.1 171499 172254 R Acr family transporter complement(171499..172254) Chlamydophila pneumoniae CWL029 894813 NP_224346.1 CDS hemL NC_000922.1 172697 174019 R catalyzes the formation of 5-aminolevulinate from (S)-4-amino-5-oxopentanoate; glutamate-1-semialdehyde aminotransferase complement(172697..174019) Chlamydophila pneumoniae CWL029 894914 NP_224347.1 CDS yqgE NC_000922.1 174090 174656 R hypothetical protein complement(174090..174656) Chlamydophila pneumoniae CWL029 894735 NP_224348.1 CDS yqdE NC_000922.1 174670 175110 R hypothetical protein complement(174670..175110) Chlamydophila pneumoniae CWL029 895153 NP_224349.1 CDS rpiA NC_000922.1 175107 175802 R Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A complement(175107..175802) Chlamydophila pneumoniae CWL029 894925 NP_224351.1 CDS yxjG_1 NC_000922.1 176211 177335 R hypothetical protein complement(176211..177335) Chlamydophila pneumoniae CWL029 894847 NP_224352.1 CDS clpB NC_000922.1 177963 180563 D Clp protease ATPase 177963..180563 Chlamydophila pneumoniae CWL029 895029 NP_224353.1 CDS CPn0145 NC_000922.1 180777 182372 D hypothetical protein 180777..182372 Chlamydophila pneumoniae CWL029 894961 NP_224354.1 CDS CPn0146 NC_000922.1 182613 183098 D hypothetical protein 182613..183098 Chlamydophila pneumoniae CWL029 894970 NP_224355.1 CDS CPn0147 NC_000922.1 183225 183674 D hypothetical protein 183225..183674 Chlamydophila pneumoniae CWL029 894891 NP_224356.1 CDS CPn0148 NC_000922.1 183846 185705 D S/T protein kinase 183846..185705 Chlamydophila pneumoniae CWL029 894945 NP_224357.1 CDS ligA NC_000922.1 185715 187703 D this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 185715..187703 Chlamydophila pneumoniae CWL029 894944 NP_224358.1 CDS CPn0150 NC_000922.1 187834 192447 D hypothetical protein 187834..192447 Chlamydophila pneumoniae CWL029 894903 NP_224359.1 CDS mhpA NC_000922.1 192622 194142 R monooxygenase complement(192622..194142) Chlamydophila pneumoniae CWL029 895554 NP_224360.1 CDS CPn0152 NC_000922.1 194315 195265 R hypothetical protein complement(194315..195265) Chlamydophila pneumoniae CWL029 894917 NP_224361.1 CDS leuS NC_000922.1 195433 197895 D leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 195433..197895 Chlamydophila pneumoniae CWL029 894824 NP_224362.1 CDS gseA NC_000922.1 197892 199205 D catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 197892..199205 Chlamydophila pneumoniae CWL029 894969 NP_224363.1 CDS CPn0155 NC_000922.1 199485 199691 R hypothetical protein complement(199485..199691) Chlamydophila pneumoniae CWL029 894937 NP_224365.1 CDS CPn0157 NC_000922.1 200295 200723 R hypothetical protein complement(200295..200723) Chlamydophila pneumoniae CWL029 895553 NP_224366.1 CDS CPn0158 NC_000922.1 200891 201430 R hypothetical protein complement(200891..201430) Chlamydophila pneumoniae CWL029 894679 NP_224367.1 CDS CPn0159 NC_000922.1 201464 201772 R hypothetical protein complement(201464..201772) Chlamydophila pneumoniae CWL029 895582 NP_224368.1 CDS pfkA_1 NC_000922.1 202124 203791 R catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; diphosphate--fructose-6-phosphate 1-phosphotransferase complement(202124..203791) Chlamydophila pneumoniae CWL029 895592 NP_224369.1 CDS CPn0161 NC_000922.1 203795 204622 R acetyltransferase complement(203795..204622) Chlamydophila pneumoniae CWL029 895571 NP_224370.1 CDS CPn0162 NC_000922.1 204800 205828 R hypothetical protein complement(204800..205828) Chlamydophila pneumoniae CWL029 895423 NP_224371.1 CDS CPn0163 NC_000922.1 206026 206397 D hypothetical protein 206026..206397 Chlamydophila pneumoniae CWL029 895102 NP_224372.1 CDS CPn0164 NC_000922.1 206498 207001 D hypothetical protein 206498..207001 Chlamydophila pneumoniae CWL029 894886 NP_224373.1 CDS CPn0165 NC_000922.1 206998 207585 D hypothetical protein 206998..207585 Chlamydophila pneumoniae CWL029 894775 NP_224374.1 CDS CPn0166 NC_000922.1 207630 207965 D hypothetical protein 207630..207965 Chlamydophila pneumoniae CWL029 895014 NP_224375.1 CDS CPn0167 NC_000922.1 207974 208306 R hypothetical protein complement(207974..208306) Chlamydophila pneumoniae CWL029 895538 NP_224376.1 CDS CPn0168 NC_000922.1 208414 208641 R hypothetical protein complement(208414..208641) Chlamydophila pneumoniae CWL029 894795 NP_224377.1 CDS CPn0169 NC_000922.1 208707 209501 R hypothetical protein complement(208707..209501) Chlamydophila pneumoniae CWL029 894946 NP_224378.1 CDS CPn0170 NC_000922.1 210022 211026 R hypothetical protein complement(210022..211026) Chlamydophila pneumoniae CWL029 895083 NP_224379.1 CDS guaA NC_000922.1 211146 212435 R GMP synthase complement(211146..212435) Chlamydophila pneumoniae CWL029 895050 NP_224380.1 CDS guaB_1 NC_000922.1 212437 213177 R inosine 5'-monophosphase dehydrogenase complement(212437..213177) Chlamydophila pneumoniae CWL029 894977 NP_224381.1 CDS guaB_2 NC_000922.1 213238 213501 R inosine 5'-monophosphase dehydrogenase complement(213238..213501) Chlamydophila pneumoniae CWL029 894754 NP_224382.1 CDS CPn0173 NC_000922.1 213712 213987 R hypothetical protein complement(213712..213987) Chlamydophila pneumoniae CWL029 895119 NP_224383.1 CDS CPn0174 NC_000922.1 214257 214727 D hypothetical protein 214257..214727 Chlamydophila pneumoniae CWL029 894933 NP_224384.1 CDS CPn0175 NC_000922.1 214898 215278 D hypothetical protein 214898..215278 Chlamydophila pneumoniae CWL029 895092 NP_224385.1 CDS CPn0176 NC_000922.1 215286 216521 D hypothetical protein 215286..216521 Chlamydophila pneumoniae CWL029 894920 NP_224386.1 CDS CPn0177 NC_000922.1 216605 217459 R hypothetical protein complement(216605..217459) Chlamydophila pneumoniae CWL029 894825 NP_224387.1 CDS CPn0178 NC_000922.1 217786 218052 R hypothetical protein complement(217786..218052) Chlamydophila pneumoniae CWL029 895110 NP_224388.1 CDS CPn0179 NC_000922.1 218053 218403 R hypothetical protein complement(218053..218403) Chlamydophila pneumoniae CWL029 895000 NP_224389.1 CDS CPn0180 NC_000922.1 218352 218906 R hypothetical protein complement(218352..218906) Chlamydophila pneumoniae CWL029 894884 NP_224390.1 CDS CPn0181 NC_000922.1 218774 219175 R hypothetical protein complement(218774..219175) Chlamydophila pneumoniae CWL029 895169 NP_224391.1 CDS accC NC_000922.1 219331 220695 R an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit complement(219331..220695) Chlamydophila pneumoniae CWL029 894812 NP_224392.1 CDS accB NC_000922.1 220692 221195 R composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit complement(220692..221195) Chlamydophila pneumoniae CWL029 894979 NP_224393.1 CDS efp_1 NC_000922.1 221218 221775 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(221218..221775) Chlamydophila pneumoniae CWL029 895189 NP_224394.1 CDS rpe NC_000922.1 221762 222451 R catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase complement(221762..222451) Chlamydophila pneumoniae CWL029 894913 NP_224395.1 CDS CPn0186 NC_000922.1 222899 224071 D protein IncA 222899..224071 Chlamydophila pneumoniae CWL029 895103 NP_224396.1 CDS CPn0187 NC_000922.1 224248 225048 D methylase 224248..225048 Chlamydophila pneumoniae CWL029 894878 NP_224397.1 CDS CPn0188 NC_000922.1 225111 226403 D hypothetical protein 225111..226403 Chlamydophila pneumoniae CWL029 895563 NP_224398.1 CDS CPn0189 NC_000922.1 226400 229828 D hypothetical protein 226400..229828 Chlamydophila pneumoniae CWL029 894982 NP_224399.1 CDS CPn0190 NC_000922.1 229919 231277 D hypothetical protein 229919..231277 Chlamydophila pneumoniae CWL029 895040 NP_224400.1 CDS glnQ NC_000922.1 231311 231991 R amino acid ABC transporter ATPase complement(231311..231991) Chlamydophila pneumoniae CWL029 895595 NP_224401.1 CDS glnP NC_000922.1 231981 232634 R amino acid ABC transporter ATPase complement(231981..232634) Chlamydophila pneumoniae CWL029 895015 NP_224402.1 CDS argR NC_000922.1 232683 233126 R arginine repressor ArgR complement(232683..233126) Chlamydophila pneumoniae CWL029 895558 NP_224403.1 CDS gcp_2 NC_000922.1 233210 234244 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 233210..234244 Chlamydophila pneumoniae CWL029 895167 NP_224404.1 CDS oppA_1 NC_000922.1 234190 235788 D oligopeptide binding protein 234190..235788 Chlamydophila pneumoniae CWL029 895059 NP_224405.1 CDS oppA_2 NC_000922.1 235939 237522 D oligopeptide binding protein 235939..237522 Chlamydophila pneumoniae CWL029 894985 NP_224406.1 CDS oppA_3 NC_000922.1 237578 238885 D oligopeptide binding protein 237578..238885 Chlamydophila pneumoniae CWL029 895178 NP_224407.1 CDS oppA_4 NC_000922.1 239169 240749 D oligopeptide binding protein 239169..240749 Chlamydophila pneumoniae CWL029 895534 NP_224408.1 CDS oppB_1 NC_000922.1 241042 241986 D oligopeptide permease 241042..241986 Chlamydophila pneumoniae CWL029 895066 NP_224409.1 CDS oppC_1 NC_000922.1 242017 242871 D oligopeptide permease 242017..242871 Chlamydophila pneumoniae CWL029 894863 NP_224410.1 CDS oppD NC_000922.1 242864 243718 D peptide ABC transporter ATPase 242864..243718 Chlamydophila pneumoniae CWL029 895051 NP_224411.1 CDS oppF NC_000922.1 243715 244503 D peptide ABC transporter ATPase 243715..244503 Chlamydophila pneumoniae CWL029 895536 NP_224414.1 CDS CPn0205 NC_000922.1 246133 246330 D hypothetical protein 246133..246330 Chlamydophila pneumoniae CWL029 895074 NP_224415.1 CDS CPn0206 NC_000922.1 246409 247164 D hypothetical protein 246409..247164 Chlamydophila pneumoniae CWL029 895080 NP_224416.1 CDS ybhI NC_000922.1 247208 248620 D dicarboxylase translocator 247208..248620 Chlamydophila pneumoniae CWL029 895075 NP_224417.1 CDS pfkA_2 NC_000922.1 248953 250605 D catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; diphosphate--fructose-6-phosphate 1-phosphotransferase 248953..250605 Chlamydophila pneumoniae CWL029 895095 NP_224418.1 CDS CPn0209 NC_000922.1 251036 251275 D hypothetical protein 251036..251275 Chlamydophila pneumoniae CWL029 895076 NP_224421.1 CDS CPn0212 NC_000922.1 252885 254066 R hypothetical protein complement(252885..254066) Chlamydophila pneumoniae CWL029 895068 NP_224422.1 CDS CPn0213 NC_000922.1 254187 254342 R hypothetical protein complement(254187..254342) Chlamydophila pneumoniae CWL029 894860 NP_224423.1 CDS CPn0214 NC_000922.1 254443 255657 R hypothetical protein complement(254443..255657) Chlamydophila pneumoniae CWL029 895145 NP_224424.1 CDS CPn0215 NC_000922.1 255756 257015 R hypothetical protein complement(255756..257015) Chlamydophila pneumoniae CWL029 894787 NP_224425.1 CDS CPn0216 NC_000922.1 257171 257608 R hypothetical protein complement(257171..257608) Chlamydophila pneumoniae CWL029 894932 NP_224426.1 CDS ypdP NC_000922.1 257896 258582 D hypothetical protein 257896..258582 Chlamydophila pneumoniae CWL029 894823 NP_224427.1 CDS CPn0218 NC_000922.1 258579 259058 R hypothetical protein complement(258579..259058) Chlamydophila pneumoniae CWL029 895044 NP_224428.1 CDS tgt NC_000922.1 259357 260475 D Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4, 5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7- deazaguanosine); queuine tRNA-ribosyltransferase 259357..260475 Chlamydophila pneumoniae CWL029 895042 NP_224429.1 CDS CPn0220 NC_000922.1 260696 261241 D hypothetical protein 260696..261241 Chlamydophila pneumoniae CWL029 895555 NP_224430.1 CDS CPn0221 NC_000922.1 261657 262067 D hypothetical protein 261657..262067 Chlamydophila pneumoniae CWL029 895009 NP_224431.1 CDS CPn0222 NC_000922.1 262504 262845 D hypothetical protein 262504..262845 Chlamydophila pneumoniae CWL029 895013 NP_224432.1 CDS CPn0223 NC_000922.1 262956 263336 D hypothetical protein 262956..263336 Chlamydophila pneumoniae CWL029 895039 NP_224433.1 CDS CPn0224 NC_000922.1 263435 263677 D hypothetical protein 263435..263677 Chlamydophila pneumoniae CWL029 894976 NP_224434.1 CDS CPn0225 NC_000922.1 263873 264544 D hypothetical protein 263873..264544 Chlamydophila pneumoniae CWL029 894750 NP_224435.1 CDS CPn0226 NC_000922.1 264566 264970 D hypothetical protein 264566..264970 Chlamydophila pneumoniae CWL029 895038 NP_224436.1 CDS dsbB NC_000922.1 265006 265416 R disulfide oxidoreductase complement(265006..265416) Chlamydophila pneumoniae CWL029 894900 NP_224437.1 CDS dsbG NC_000922.1 265409 266110 R disulfide bond chaperone complement(265409..266110) Chlamydophila pneumoniae CWL029 894954 NP_224438.1 CDS CPn0229 NC_000922.1 266328 267563 D hypothetical protein 266328..267563 Chlamydophila pneumoniae CWL029 894931 NP_224439.1 CDS CPn0230 NC_000922.1 267573 268253 R hypothetical protein complement(267573..268253) Chlamydophila pneumoniae CWL029 894893 NP_224440.1 CDS tauB NC_000922.1 268250 268957 R nitrate/iron ABC transporter ATPase complement(268250..268957) Chlamydophila pneumoniae CWL029 894798 NP_224441.1 CDS CPn0232 NC_000922.1 269229 270122 R 5'-methylthioadenosine nucleosidase complement(269229..270122) Chlamydophila pneumoniae CWL029 895520 NP_224442.1 CDS CPn0233 NC_000922.1 270245 270424 R hypothetical protein complement(270245..270424) Chlamydophila pneumoniae CWL029 894908 NP_224443.1 CDS CPn0234 NC_000922.1 270545 271240 R hypothetical protein complement(270545..271240) Chlamydophila pneumoniae CWL029 895112 NP_224444.1 CDS kdsB NC_000922.1 271416 272180 D CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 271416..272180 Chlamydophila pneumoniae CWL029 895121 NP_224445.1 CDS pyrG NC_000922.1 272156 273769 D CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 272156..273769 Chlamydophila pneumoniae CWL029 895146 NP_224446.1 CDS yggF NC_000922.1 273762 274217 D similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase 273762..274217 Chlamydophila pneumoniae CWL029 895148 NP_224447.1 CDS zwf NC_000922.1 274303 275841 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 274303..275841 Chlamydophila pneumoniae CWL029 895162 NP_224448.1 CDS devB NC_000922.1 275899 276675 D catalyzes the formation of 6-phospho-D-gluconate from 6-phospho-D-glucono-1,5-lactone; 6-phosphogluconolactonase 275899..276675 Chlamydophila pneumoniae CWL029 895149 NP_224449.1 CDS CPn0240 NC_000922.1 276695 277861 R hypothetical protein complement(276695..277861) Chlamydophila pneumoniae CWL029 895173 NP_224450.1 CDS CPn0241 NC_000922.1 278200 279354 R hypothetical protein complement(278200..279354) Chlamydophila pneumoniae CWL029 895154 NP_224451.1 CDS CPn0242 NC_000922.1 279484 279918 R hypothetical protein complement(279484..279918) Chlamydophila pneumoniae CWL029 895155 NP_224452.1 CDS CPn0243 NC_000922.1 280130 280555 R hypothetical protein complement(280130..280555) Chlamydophila pneumoniae CWL029 895012 NP_224453.1 CDS adk NC_000922.1 280918 281559 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 280918..281559 Chlamydophila pneumoniae CWL029 895175 NP_224454.1 CDS ydhO NC_000922.1 281645 282502 D polysaccharide hydrolase invasin repeat-containing protein 281645..282502 Chlamydophila pneumoniae CWL029 894996 NP_224455.1 CDS rpsI NC_000922.1 282548 282952 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(282548..282952) Chlamydophila pneumoniae CWL029 895171 NP_224456.1 CDS rplM NC_000922.1 282966 283415 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(282966..283415) Chlamydophila pneumoniae CWL029 894838 NP_224457.1 CDS ycfV NC_000922.1 283647 284327 R ABC transporter ATPase complement(283647..284327) Chlamydophila pneumoniae CWL029 895161 NP_224458.1 CDS CPn0249 NC_000922.1 284330 285841 R hypothetical protein complement(284330..285841) Chlamydophila pneumoniae CWL029 895147 NP_224459.1 CDS rpmG NC_000922.1 285899 286057 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 complement(285899..286057) Chlamydophila pneumoniae CWL029 895192 NP_224460.1 CDS CPn0251 NC_000922.1 286060 287562 D hypothetical protein 286060..287562 Chlamydophila pneumoniae CWL029 894671 NP_224461.1 CDS CPn0254 NC_000922.1 288456 289262 R hypothetical protein complement(288456..289262) Chlamydophila pneumoniae CWL029 895533 NP_224462.1 CDS CPn0255 NC_000922.1 289326 290165 R hypothetical protein complement(289326..290165) Chlamydophila pneumoniae CWL029 894855 NP_224463.1 CDS CPn0256 NC_000922.1 290395 291264 R hypothetical protein complement(290395..291264) Chlamydophila pneumoniae CWL029 895174 NP_224464.1 CDS CPn0257 NC_000922.1 291264 292127 R hypothetical protein complement(291264..292127) Chlamydophila pneumoniae CWL029 895523 NP_224465.1 CDS secA_1 NC_000922.1 293545 294045 R protein translocase subunit complement(293545..294045) Chlamydophila pneumoniae CWL029 895004 NP_224466.1 CDS ydaO NC_000922.1 294302 295036 D PP-loop superfamily ATPase 294302..295036 Chlamydophila pneumoniae CWL029 895141 NP_224467.1 CDS surE NC_000922.1 295091 295936 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 295091..295936 Chlamydophila pneumoniae CWL029 894926 NP_224468.1 CDS yqfU NC_000922.1 296249 297139 D hypothetical protein 296249..297139 Chlamydophila pneumoniae CWL029 895212 NP_224469.1 CDS ubiD NC_000922.1 297152 297730 R aromatic acid decarboxylase complement(297152..297730) Chlamydophila pneumoniae CWL029 894832 NP_224470.1 CDS ubiA NC_000922.1 297727 298620 R UbiA prenyltransferase catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; prenyltransferase complement(297727..298620) Chlamydophila pneumoniae CWL029 894841 NP_224471.1 CDS CPn0266 NC_000922.1 299184 299879 D hypothetical protein 299184..299879 Chlamydophila pneumoniae CWL029 895190 NP_224472.1 CDS CPn0267 NC_000922.1 300122 300913 D hypothetical protein 300122..300913 Chlamydophila pneumoniae CWL029 895515 NP_224473.1 CDS CPn0268 NC_000922.1 300935 301321 D hypothetical protein 300935..301321 Chlamydophila pneumoniae CWL029 894829 NP_224474.1 CDS CPn0269 NC_000922.1 301473 302450 R dipeptidase complement(301473..302450) Chlamydophila pneumoniae CWL029 894790 NP_224475.1 CDS ywlC NC_000922.1 302465 303325 R SuA5 superfamily-related protein complement(302465..303325) Chlamydophila pneumoniae CWL029 895210 NP_224476.1 CDS CPn0271 NC_000922.1 303634 304365 D lysophospholipase esterase 303634..304365 Chlamydophila pneumoniae CWL029 895195 NP_224477.1 CDS dnaX_2 NC_000922.1 304337 305233 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' complement(304337..305233) Chlamydophila pneumoniae CWL029 894839 NP_224478.1 CDS tmk NC_000922.1 305224 305844 R catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase complement(305224..305844) Chlamydophila pneumoniae CWL029 895180 NP_224479.1 CDS gyrA_1 NC_000922.1 305849 308353 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A complement(305849..308353) Chlamydophila pneumoniae CWL029 894973 NP_224480.1 CDS gyrB NC_000922.1 308369 310786 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B complement(308369..310786) Chlamydophila pneumoniae CWL029 895198 NP_224481.1 CDS CPn0276 NC_000922.1 310790 311137 R hypothetical protein complement(310790..311137) Chlamydophila pneumoniae CWL029 895156 NP_224482.1 CDS CPn0277 NC_000922.1 311401 311910 R hypothetical protein complement(311401..311910) Chlamydophila pneumoniae CWL029 895186 NP_224483.1 CDS CPn0278 NC_000922.1 312057 312875 R outer membrane lipoprotein complement(312057..312875) Chlamydophila pneumoniae CWL029 894792 NP_224484.1 CDS CPn0279 NC_000922.1 312872 313537 R ABC transporter permease complement(312872..313537) Chlamydophila pneumoniae CWL029 895194 NP_224485.1 CDS dppF_1 NC_000922.1 313547 314572 R peptide ABC transporter ATPase complement(313547..314572) Chlamydophila pneumoniae CWL029 894948 NP_224486.1 CDS dhnA NC_000922.1 315057 316106 D catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; fructose-bisphosphate aldolase 315057..316106 Chlamydophila pneumoniae CWL029 894851 NP_224487.1 CDS xasA NC_000922.1 316126 317532 D amino acid transporter 316126..317532 Chlamydophila pneumoniae CWL029 895209 NP_224488.1 CDS CPn0283 NC_000922.1 317529 318497 R hypothetical protein complement(317529..318497) Chlamydophila pneumoniae CWL029 895205 NP_224489.1 CDS CPn0284 NC_000922.1 318548 319045 R hypothetical protein complement(318548..319045) Chlamydophila pneumoniae CWL029 894800 NP_224490.1 CDS CPn0285 NC_000922.1 319048 320595 R hypothetical protein complement(319048..320595) Chlamydophila pneumoniae CWL029 895201 NP_224491.1 CDS mgtE NC_000922.1 320647 322059 R Mg2+ transporter complement(320647..322059) Chlamydophila pneumoniae CWL029 894843 NP_224492.1 CDS CPn0287 NC_000922.1 322086 324221 R hypothetical protein complement(322086..324221) Chlamydophila pneumoniae CWL029 895214 NP_224493.1 CDS CPn0288 NC_000922.1 324568 325716 R hypothetical protein complement(324568..325716) Chlamydophila pneumoniae CWL029 894809 NP_224494.1 CDS aaaT NC_000922.1 325812 326999 D neutral amino acid (glutamate) transporter 325812..326999 Chlamydophila pneumoniae CWL029 894826 NP_224495.1 CDS CPn0290 NC_000922.1 327042 328526 D Na-dependent transporter 327042..328526 Chlamydophila pneumoniae CWL029 895041 NP_224496.1 CDS incB NC_000922.1 328667 329197 D inclusion membrane protein B 328667..329197 Chlamydophila pneumoniae CWL029 895081 NP_224497.1 CDS incC NC_000922.1 329228 329839 D inclusion membrane protein C 329228..329839 Chlamydophila pneumoniae CWL029 895208 NP_224498.1 CDS CPn0293 NC_000922.1 329949 332726 D hypothetical protein 329949..332726 Chlamydophila pneumoniae CWL029 895085 NP_224499.1 CDS CPn0294 NC_000922.1 333092 333505 D cAMP-dependent protein kinase regulatory subunit 333092..333505 Chlamydophila pneumoniae CWL029 894983 NP_224500.1 CDS acpP NC_000922.1 333624 333863 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(333624..333863) Chlamydophila pneumoniae CWL029 895028 NP_224501.1 CDS fabG NC_000922.1 334019 334765 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(334019..334765) Chlamydophila pneumoniae CWL029 894695 NP_224502.1 CDS fabD NC_000922.1 334771 335697 R ACP S-malonyltransferase complement(334771..335697) Chlamydophila pneumoniae CWL029 894994 NP_224503.1 CDS fabH NC_000922.1 335714 336721 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase complement(335714..336721) Chlamydophila pneumoniae CWL029 895109 NP_224504.1 CDS recR NC_000922.1 336816 337418 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 336816..337418 Chlamydophila pneumoniae CWL029 895111 NP_224505.1 CDS yaeT NC_000922.1 337783 340155 D hypothetical protein 337783..340155 Chlamydophila pneumoniae CWL029 894881 NP_224506.1 CDS CPn0301 NC_000922.1 340250 340765 D OmpH-like outer membrane protein 340250..340765 Chlamydophila pneumoniae CWL029 895026 NP_224507.1 CDS lpxD NC_000922.1 340787 341869 D adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 340787..341869 Chlamydophila pneumoniae CWL029 894718 NP_224508.1 CDS CPn0303 NC_000922.1 341918 342958 R hypothetical protein complement(341918..342958) Chlamydophila pneumoniae CWL029 895101 NP_224509.1 CDS pdhA NC_000922.1 343133 344161 D pyruvate dehydrogenase subunit alpha 343133..344161 Chlamydophila pneumoniae CWL029 895016 NP_224510.1 CDS pdhB NC_000922.1 344154 345140 D pyruvate dehydrogenase subunit beta 344154..345140 Chlamydophila pneumoniae CWL029 894791 NP_224511.1 CDS pdhC NC_000922.1 345145 346434 D Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA; branched-chain alpha-keto acid dehydrogenase subunit E2 345145..346434 Chlamydophila pneumoniae CWL029 894987 NP_224512.1 CDS glgP NC_000922.1 346512 348986 R glycogen phosphorylase complement(346512..348986) Chlamydophila pneumoniae CWL029 895140 NP_224513.1 CDS CPn0308 NC_000922.1 349234 349599 D hypothetical protein 349234..349599 Chlamydophila pneumoniae CWL029 895089 NP_224514.1 CDS dnaA NC_000922.1 349592 350974 R binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosome replication initiator DnaA complement(349592..350974) Chlamydophila pneumoniae CWL029 895122 NP_224515.1 CDS 60IM NC_000922.1 351046 353433 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC complement(351046..353433) Chlamydophila pneumoniae CWL029 895540 NP_224516.1 CDS lgt NC_000922.1 353572 354438 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(353572..354438) Chlamydophila pneumoniae CWL029 895071 NP_224517.1 CDS CPn0312 NC_000922.1 354524 354979 D hypothetical protein 354524..354979 Chlamydophila pneumoniae CWL029 895544 NP_224518.1 CDS acpS NC_000922.1 354990 355358 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 354990..355358 Chlamydophila pneumoniae CWL029 894726 NP_224519.1 CDS trxB NC_000922.1 355350 356285 R thioredoxin reductase complement(355350..356285) Chlamydophila pneumoniae CWL029 894975 NP_224520.1 CDS rpsA NC_000922.1 356977 358719 D in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 356977..358719 Chlamydophila pneumoniae CWL029 895056 NP_224521.1 CDS nusA NC_000922.1 358820 360124 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 358820..360124 Chlamydophila pneumoniae CWL029 895468 NP_224522.1 CDS infB NC_000922.1 360081 362753 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 360081..362753 Chlamydophila pneumoniae CWL029 894990 NP_224523.1 CDS rbfA NC_000922.1 362767 363129 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 362767..363129 Chlamydophila pneumoniae CWL029 895549 NP_224524.1 CDS truB NC_000922.1 363175 363882 D catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 363175..363882 Chlamydophila pneumoniae CWL029 895580 NP_224525.1 CDS ribF NC_000922.1 363860 364786 D catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 363860..364786 Chlamydophila pneumoniae CWL029 894918 NP_224526.1 CDS ychF NC_000922.1 364764 365858 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(364764..365858) Chlamydophila pneumoniae CWL029 895594 NP_224527.1 CDS yscU NC_000922.1 366249 367331 D type III secretion system protein 366249..367331 Chlamydophila pneumoniae CWL029 895218 NP_224528.1 CDS lcrD NC_000922.1 367331 369463 D low calcium response D 367331..369463 Chlamydophila pneumoniae CWL029 895498 NP_224529.1 CDS lcrE NC_000922.1 369492 370691 D low calcium response E 369492..370691 Chlamydophila pneumoniae CWL029 895078 NP_224530.1 CDS sycE NC_000922.1 370708 371151 D secretion chaperone 370708..371151 Chlamydophila pneumoniae CWL029 895118 NP_224531.1 CDS malQ NC_000922.1 371148 372728 D amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 371148..372728 Chlamydophila pneumoniae CWL029 895084 NP_224532.1 CDS rpmB NC_000922.1 372945 373214 D required for 70S ribosome assembly; 50S ribosomal protein L28 372945..373214 Chlamydophila pneumoniae CWL029 895130 NP_224533.1 CDS CPn0328 NC_000922.1 373241 374995 D hypothetical protein 373241..374995 Chlamydophila pneumoniae CWL029 894714 NP_224534.1 CDS CPn0329 NC_000922.1 375088 376149 D phopholipase D 375088..376149 Chlamydophila pneumoniae CWL029 894814 NP_224535.1 CDS CPn0330 NC_000922.1 376199 376675 R hypothetical protein complement(376199..376675) Chlamydophila pneumoniae CWL029 895011 NP_224536.1 CDS CPn0331 NC_000922.1 376698 378437 R hypothetical protein complement(376698..378437) Chlamydophila pneumoniae CWL029 895508 NP_224537.1 CDS CPn0332 NC_000922.1 378533 378655 R hypothetical protein complement(378533..378655) Chlamydophila pneumoniae CWL029 895535 NP_224538.1 CDS CPn0333 NC_000922.1 378797 379090 R late transcription unit B protein complement(378797..379090) Chlamydophila pneumoniae CWL029 895560 NP_224539.1 CDS CPn0334 NC_000922.1 379311 379826 D hypothetical protein 379311..379826 Chlamydophila pneumoniae CWL029 894764 NP_224540.1 CDS folD NC_000922.1 379817 380677 D catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 379817..380677 Chlamydophila pneumoniae CWL029 894869 NP_224541.1 CDS yojL NC_000922.1 380650 381594 D hypothetical protein 380650..381594 Chlamydophila pneumoniae CWL029 894910 NP_224542.1 CDS smpB NC_000922.1 381572 382027 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(381572..382027) Chlamydophila pneumoniae CWL029 895127 NP_224543.1 CDS dnaN NC_000922.1 382278 383378 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 382278..383378 Chlamydophila pneumoniae CWL029 894672 NP_224544.1 CDS yaeL NC_000922.1 385555 387420 R metalloprotease complement(385555..387420) Chlamydophila pneumoniae CWL029 895168 NP_224545.1 CDS yaeM NC_000922.1 387433 388572 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(387433..388572) Chlamydophila pneumoniae CWL029 895172 NP_224546.1 CDS ytgD NC_000922.1 388701 389675 R hypothetical protein complement(388701..389675) Chlamydophila pneumoniae CWL029 895177 NP_224547.1 CDS ytgC NC_000922.1 389675 391021 R hypothetical protein complement(389675..391021) Chlamydophila pneumoniae CWL029 895188 NP_224548.1 CDS ytgB_1 NC_000922.1 391024 391803 R rRNA methylase complement(391024..391803) Chlamydophila pneumoniae CWL029 895181 NP_224549.1 CDS ytgA NC_000922.1 391787 392770 R solute-binding protein complement(391787..392770) Chlamydophila pneumoniae CWL029 895196 NP_224550.1 CDS CPn0350 NC_000922.1 393181 393687 D hypothetical protein 393181..393687 Chlamydophila pneumoniae CWL029 895193 NP_224551.1 CDS adt_1 NC_000922.1 393888 395435 D ADP/ATP translocase 393888..395435 Chlamydophila pneumoniae CWL029 895158 NP_224552.1 CDS CPn0352 NC_000922.1 395574 396833 D hypothetical protein 395574..396833 Chlamydophila pneumoniae CWL029 895199 NP_224553.1 CDS CPn0353 NC_000922.1 396893 397138 D hypothetical protein 396893..397138 Chlamydophila pneumoniae CWL029 894836 NP_224554.1 CDS CPn0354 NC_000922.1 397167 398510 D hypothetical protein 397167..398510 Chlamydophila pneumoniae CWL029 895185 NP_224555.1 CDS CPn0355 NC_000922.1 398588 399889 R hypothetical protein complement(398588..399889) Chlamydophila pneumoniae CWL029 894805 NP_224558.1 CDS CPn0358 NC_000922.1 401575 401751 R hypothetical protein complement(401575..401751) Chlamydophila pneumoniae CWL029 894811 NP_224559.1 CDS lepA NC_000922.1 402012 403820 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 402012..403820 Chlamydophila pneumoniae CWL029 894647 NP_224560.1 CDS gnd NC_000922.1 403919 405358 R catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase complement(403919..405358) Chlamydophila pneumoniae CWL029 895135 NP_224561.1 CDS tyrS NC_000922.1 405379 406647 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(405379..406647) Chlamydophila pneumoniae CWL029 895054 NP_224562.1 CDS rpsD NC_000922.1 407052 407825 R expressed in response to temperature increase; may be involved in expression of genes involved in the developmental cycle of Chlamydia; RNA polymerase sigma factor sigma-28 complement(407052..407825) Chlamydophila pneumoniae CWL029 895022 NP_224563.1 CDS flhA NC_000922.1 407940 409688 R type III secretion system protein complement(407940..409688) Chlamydophila pneumoniae CWL029 895008 NP_224564.1 CDS fer4 NC_000922.1 409966 410241 D ferredoxin IV 409966..410241 Chlamydophila pneumoniae CWL029 894923 NP_224565.1 CDS CPn0365 NC_000922.1 410528 411547 D hypothetical protein 410528..411547 Chlamydophila pneumoniae CWL029 895139 NP_224566.1 CDS CPn0366 NC_000922.1 411976 412443 D hypothetical protein 411976..412443 Chlamydophila pneumoniae CWL029 894719 NP_224567.1 CDS CPn0367 NC_000922.1 413102 413839 D hypothetical protein 413102..413839 Chlamydophila pneumoniae CWL029 895506 NP_224568.1 CDS CPn0368 NC_000922.1 413790 414110 D hypothetical protein 413790..414110 Chlamydophila pneumoniae CWL029 894743 NP_224569.1 CDS CPn0369 NC_000922.1 414351 415565 D hypothetical protein 414351..415565 Chlamydophila pneumoniae CWL029 895097 NP_224570.1 CDS CPn0370 NC_000922.1 415800 416915 D hypothetical protein 415800..416915 Chlamydophila pneumoniae CWL029 895579 NP_224571.1 CDS CPn0371 NC_000922.1 417147 417506 D hypothetical protein 417147..417506 Chlamydophila pneumoniae CWL029 894940 NP_224572.1 CDS CPn0372 NC_000922.1 417687 418004 D hypothetical protein 417687..418004 Chlamydophila pneumoniae CWL029 894922 NP_224573.1 CDS gcpE NC_000922.1 418380 420221 D catalyzes the conversion of 2C-methyl-D-erythritol 2,4-clclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; these proteins appear to consist of duplicate domains as compared to Escherichia coli IspG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 418380..420221 Chlamydophila pneumoniae CWL029 895134 NP_224574.1 CDS CPn0374 NC_000922.1 420218 420964 D hypothetical protein 420218..420964 Chlamydophila pneumoniae CWL029 894887 NP_224575.1 CDS CPn0375 NC_000922.1 421121 421618 D hypothetical protein 421121..421618 Chlamydophila pneumoniae CWL029 894955 NP_224576.1 CDS CPn0376 NC_000922.1 421854 422297 D hypothetical protein 421854..422297 Chlamydophila pneumoniae CWL029 894873 NP_224577.1 CDS sucB_1 NC_000922.1 422344 423438 R component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase complement(422344..423438) Chlamydophila pneumoniae CWL029 894957 NP_224578.1 CDS sucA NC_000922.1 423442 426168 R SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 complement(423442..426168) Chlamydophila pneumoniae CWL029 894939 NP_224579.1 CDS CPn0379 NC_000922.1 426322 426768 D hypothetical protein 426322..426768 Chlamydophila pneumoniae CWL029 894972 NP_224580.1 CDS hemN_1 NC_000922.1 426758 427879 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 426758..427879 Chlamydophila pneumoniae CWL029 894905 NP_224581.1 CDS CPn0381 NC_000922.1 428034 429809 R hypothetical protein complement(428034..429809) Chlamydophila pneumoniae CWL029 894962 NP_224582.1 CDS yabC_1 NC_000922.1 430033 430749 R SAM-dependent methyltransferase complement(430033..430749) Chlamydophila pneumoniae CWL029 894949 NP_224583.1 CDS CPn0383 NC_000922.1 430746 431693 R hypothetical protein complement(430746..431693) Chlamydophila pneumoniae CWL029 894927 NP_224584.1 CDS hctB NC_000922.1 431859 432377 R histone-like protein 2 complement(431859..432377) Chlamydophila pneumoniae CWL029 894919 NP_224585.1 CDS pepA NC_000922.1 432519 434018 R catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase complement(432519..434018) Chlamydophila pneumoniae CWL029 894916 NP_224586.1 CDS ssb NC_000922.1 434043 434525 R binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein complement(434043..434525) Chlamydophila pneumoniae CWL029 894901 NP_224587.1 CDS CPn0387 NC_000922.1 434696 435196 R hypothetical protein complement(434696..435196) Chlamydophila pneumoniae CWL029 894874 NP_224588.1 CDS glgX NC_000922.1 435329 437323 D glycogen hydrolase 435329..437323 Chlamydophila pneumoniae CWL029 894889 NP_224589.1 CDS CPn0389 NC_000922.1 437316 438134 R hypothetical protein complement(437316..438134) Chlamydophila pneumoniae CWL029 894911 NP_224590.1 CDS ruvB NC_000922.1 438131 439144 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(438131..439144) Chlamydophila pneumoniae CWL029 894883 NP_224591.1 CDS CPn0391 NC_000922.1 439507 439692 R hypothetical protein complement(439507..439692) Chlamydophila pneumoniae CWL029 894897 NP_224592.1 CDS dcd NC_000922.1 439814 440386 D Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 439814..440386 Chlamydophila pneumoniae CWL029 894877 NP_224593.1 CDS CPn0393 NC_000922.1 440379 440726 D hypothetical protein 440379..440726 Chlamydophila pneumoniae CWL029 894875 NP_224594.1 CDS tlyC_1 NC_000922.1 440736 441971 D hemolysin 440736..441971 Chlamydophila pneumoniae CWL029 894797 NP_224595.1 CDS CPn0395 NC_000922.1 441964 443178 D hypothetical protein 441964..443178 Chlamydophila pneumoniae CWL029 894885 NP_224596.1 CDS yhfO NC_000922.1 443238 444353 R NifS-like aminotransferase complement(443238..444353) Chlamydophila pneumoniae CWL029 894827 NP_224597.1 CDS CPn0397 NC_000922.1 444378 445115 R PP2C phosphatase complement(444378..445115) Chlamydophila pneumoniae CWL029 894879 NP_224598.1 CDS CPn0398 NC_000922.1 445533 445703 D hypothetical protein 445533..445703 Chlamydophila pneumoniae CWL029 894820 NP_224599.1 CDS CPn0399 NC_000922.1 445879 446526 D hypothetical protein 445879..446526 Chlamydophila pneumoniae CWL029 894871 NP_224600.1 CDS CPn0400 NC_000922.1 446536 447309 D hypothetical protein 446536..447309 Chlamydophila pneumoniae CWL029 894845 NP_224601.1 CDS CPn0401 NC_000922.1 447492 447884 R hypothetical protein complement(447492..447884) Chlamydophila pneumoniae CWL029 894822 NP_224602.1 CDS mutY NC_000922.1 447885 448994 R adenine glycosylase complement(447885..448994) Chlamydophila pneumoniae CWL029 895002 NP_224603.1 CDS yceC NC_000922.1 449015 449713 D pseudouridine synthase 449015..449713 Chlamydophila pneumoniae CWL029 895037 NP_224604.1 CDS CPn0404 NC_000922.1 449868 450887 R hypothetical protein complement(449868..450887) Chlamydophila pneumoniae CWL029 895020 NP_224605.1 CDS CPn0405 NC_000922.1 450963 451739 R hypothetical protein complement(450963..451739) Chlamydophila pneumoniae CWL029 895129 NP_224606.1 CDS fabI NC_000922.1 451969 452868 D Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 451969..452868 Chlamydophila pneumoniae CWL029 894963 NP_224607.1 CDS CPn0407 NC_000922.1 452855 453742 R HAD family phosphatase complement(452855..453742) Chlamydophila pneumoniae CWL029 895099 NP_224608.1 CDS CPn0408 NC_000922.1 454105 454584 D hypothetical protein 454105..454584 Chlamydophila pneumoniae CWL029 895079 NP_224609.1 CDS CPn0409 NC_000922.1 454645 455130 D hypothetical protein 454645..455130 Chlamydophila pneumoniae CWL029 895094 NP_224610.1 CDS dnaQ_1 NC_000922.1 455123 455836 D 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 455123..455836 Chlamydophila pneumoniae CWL029 895030 NP_224611.1 CDS CPn0411 NC_000922.1 455833 456612 D hypothetical protein 455833..456612 Chlamydophila pneumoniae CWL029 895133 NP_224612.1 CDS CPn0412 NC_000922.1 456590 457249 D hypothetical protein 456590..457249 Chlamydophila pneumoniae CWL029 895184 NP_224613.1 CDS msbA NC_000922.1 457224 459203 R transport ATP binding protein complement(457224..459203) Chlamydophila pneumoniae CWL029 895010 NP_224614.1 CDS accA NC_000922.1 459169 460143 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(459169..460143) Chlamydophila pneumoniae CWL029 895203 NP_224615.1 CDS CPn0415 NC_000922.1 460218 461498 R hypothetical protein complement(460218..461498) Chlamydophila pneumoniae CWL029 894793 NP_224616.1 CDS himD NC_000922.1 461554 461856 R integration host factor subunit alpha complement(461554..461856) Chlamydophila pneumoniae CWL029 895098 NP_224617.1 CDS amiA NC_000922.1 462241 463035 R N-acetylmuramoyl alanine amidase complement(462241..463035) Chlamydophila pneumoniae CWL029 894909 NP_224618.1 CDS murE NC_000922.1 462950 464401 R involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(462950..464401) Chlamydophila pneumoniae CWL029 894904 NP_224619.1 CDS pbp3 NC_000922.1 464873 466834 R transglycosylase/transpeptidase complement(464873..466834) Chlamydophila pneumoniae CWL029 895033 NP_224620.1 CDS CPn0420 NC_000922.1 466821 467108 R hypothetical protein complement(466821..467108) Chlamydophila pneumoniae CWL029 894992 NP_224621.1 CDS mraW NC_000922.1 467105 467998 R S-adenosyl-methyltransferase MraW complement(467105..467998) Chlamydophila pneumoniae CWL029 895082 NP_224622.1 CDS CPn0422 NC_000922.1 468242 468787 D hypothetical protein 468242..468787 Chlamydophila pneumoniae CWL029 895116 NP_224623.1 CDS CPn0423 NC_000922.1 468791 469219 D hypothetical protein 468791..469219 Chlamydophila pneumoniae CWL029 895019 NP_224624.1 CDS dnaA NC_000922.1 469612 470964 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosome replication initiator DnaA 469612..470964 Chlamydophila pneumoniae CWL029 895183 NP_224625.1 CDS CPn0425 NC_000922.1 470980 471567 D hypothetical protein 470980..471567 Chlamydophila pneumoniae CWL029 894842 NP_224626.1 CDS CPn0426 NC_000922.1 471533 472111 R hypothetical protein complement(471533..472111) Chlamydophila pneumoniae CWL029 894817 NP_224627.1 CDS nqr2 NC_000922.1 472207 473718 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 472207..473718 Chlamydophila pneumoniae CWL029 895091 NP_224628.1 CDS nqr3 NC_000922.1 473722 474684 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 473722..474684 Chlamydophila pneumoniae CWL029 895055 NP_224629.1 CDS nqr4 NC_000922.1 474681 475322 D Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D 474681..475322 Chlamydophila pneumoniae CWL029 895128 NP_224630.1 CDS nqr5 NC_000922.1 475326 476096 D Na(+)-translocating NADH-quinone reductase subunit E 475326..476096 Chlamydophila pneumoniae CWL029 894968 NP_224631.1 CDS CPn0431 NC_000922.1 476148 476483 R hypothetical protein complement(476148..476483) Chlamydophila pneumoniae CWL029 894737 NP_224632.1 CDS CPn0432 NC_000922.1 476511 476816 R hypothetical protein complement(476511..476816) Chlamydophila pneumoniae CWL029 894907 NP_224633.1 CDS gcsH NC_000922.1 476926 477273 R part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H complement(476926..477273) Chlamydophila pneumoniae CWL029 894849 NP_224634.1 CDS CPn0434 NC_000922.1 477273 479462 R hypothetical protein complement(477273..479462) Chlamydophila pneumoniae CWL029 894998 NP_224635.1 CDS CPn0435 NC_000922.1 479472 480902 R phospholipase D complement(479472..480902) Chlamydophila pneumoniae CWL029 895058 NP_224636.1 CDS lplA_1 NC_000922.1 480899 481618 R lipoate protein ligase-like protein complement(480899..481618) Chlamydophila pneumoniae CWL029 894816 NP_224637.1 CDS clpC NC_000922.1 481816 484353 D ClpC protease 481816..484353 Chlamydophila pneumoniae CWL029 895503 NP_224638.1 CDS mnmA NC_000922.1 484331 485416 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(484331..485416) Chlamydophila pneumoniae CWL029 895017 NP_224639.1 CDS CPn0439 NC_000922.1 485553 486080 D hypothetical protein 485553..486080 Chlamydophila pneumoniae CWL029 894848 NP_224640.1 CDS CPn0440 NC_000922.1 486105 486743 D hypothetical protein 486105..486743 Chlamydophila pneumoniae CWL029 895551 NP_224641.1 CDS CPn0441 NC_000922.1 486891 487841 D hypothetical protein 486891..487841 Chlamydophila pneumoniae CWL029 895138 NP_224642.1 CDS CPn0442 NC_000922.1 488013 488531 D hypothetical protein 488013..488531 Chlamydophila pneumoniae CWL029 894774 NP_224643.1 CDS CPn0443 NC_000922.1 488729 489982 D hypothetical protein 488729..489982 Chlamydophila pneumoniae CWL029 894892 NP_224644.1 CDS pmp_6 NC_000922.1 490287 494510 D hypothetical protein 490287..494510 Chlamydophila pneumoniae CWL029 895578 NP_224645.1 CDS pmp_7 NC_000922.1 494772 497582 D hypothetical protein 494772..497582 Chlamydophila pneumoniae CWL029 895160 NP_224646.1 CDS pmp_8 NC_000922.1 497626 500418 D hypothetical protein 497626..500418 Chlamydophila pneumoniae CWL029 894653 NP_224647.1 CDS pmp_9 NC_000922.1 500568 503354 D hypothetical protein 500568..503354 Chlamydophila pneumoniae CWL029 894740 NP_224648.1 CDS yxjG_2 NC_000922.1 503695 504810 R hypothetical protein complement(503695..504810) Chlamydophila pneumoniae CWL029 895126 NP_224649.1 CDS pmp_11 NC_000922.1 508275 511061 D hypothetical protein 508275..511061 Chlamydophila pneumoniae CWL029 894690 NP_224650.1 CDS pmp_12 NC_000922.1 511319 512863 D hypothetical protein 511319..512863 Chlamydophila pneumoniae CWL029 895086 NP_224651.1 CDS pmp_13 NC_000922.1 513234 516155 D hypothetical protein 513234..516155 Chlamydophila pneumoniae CWL029 895007 NP_224652.1 CDS pmp_14 NC_000922.1 516182 519118 D hypothetical protein 516182..519118 Chlamydophila pneumoniae CWL029 894924 NP_224655.1 CDS CPn0457 NC_000922.1 522117 523865 R hypothetical protein complement(522117..523865) Chlamydophila pneumoniae CWL029 894652 NP_224656.1 CDS CPn0458 NC_000922.1 524233 526320 R hypothetical protein complement(524233..526320) Chlamydophila pneumoniae CWL029 894710 NP_224657.1 CDS CPn0459 NC_000922.1 526616 527005 R hypothetical protein complement(526616..527005) Chlamydophila pneumoniae CWL029 895107 NP_224658.1 CDS CPn0460 NC_000922.1 526989 527840 R hypothetical protein complement(526989..527840) Chlamydophila pneumoniae CWL029 894773 NP_224659.1 CDS CPn0461 NC_000922.1 527841 528638 R hypothetical protein complement(527841..528638) Chlamydophila pneumoniae CWL029 894890 NP_224660.1 CDS CPn0462 NC_000922.1 529034 531052 R hypothetical protein complement(529034..531052) Chlamydophila pneumoniae CWL029 895070 NP_224661.1 CDS CPn0463 NC_000922.1 531188 532357 R hypothetical protein complement(531188..532357) Chlamydophila pneumoniae CWL029 894872 NP_224662.1 CDS CPn0464 NC_000922.1 532363 532842 R hypothetical protein complement(532363..532842) Chlamydophila pneumoniae CWL029 894958 NP_224663.1 CDS CPn0465 NC_000922.1 532868 533212 R hypothetical protein complement(532868..533212) Chlamydophila pneumoniae CWL029 895501 NP_224664.1 CDS pmp_15 NC_000922.1 533724 536540 D hypothetical protein 533724..536540 Chlamydophila pneumoniae CWL029 894951 NP_224665.1 CDS pmp_16 NC_000922.1 536633 539437 D hypothetical protein 536633..539437 Chlamydophila pneumoniae CWL029 894807 NP_224667.1 CDS pmp_18 NC_000922.1 542564 545404 D hypothetical protein 542564..545404 Chlamydophila pneumoniae CWL029 894859 NP_224668.1 CDS CPn0472 NC_000922.1 545578 547905 R hypothetical protein complement(545578..547905) Chlamydophila pneumoniae CWL029 895383 NP_224669.1 CDS CPn0473 NC_000922.1 548067 549593 R hypothetical protein complement(548067..549593) Chlamydophila pneumoniae CWL029 895690 NP_224670.1 CDS CPn0474 NC_000922.1 549804 551573 R hypothetical protein complement(549804..551573) Chlamydophila pneumoniae CWL029 895646 NP_224671.1 CDS glgB NC_000922.1 551682 553844 R catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein complement(551682..553844) Chlamydophila pneumoniae CWL029 895645 NP_224672.1 CDS CPn0476 NC_000922.1 553855 554844 R hypothetical protein complement(553855..554844) Chlamydophila pneumoniae CWL029 895644 NP_224673.1 CDS yqeV NC_000922.1 554841 556106 R hypothetical protein complement(554841..556106) Chlamydophila pneumoniae CWL029 895600 NP_224674.1 CDS hflX NC_000922.1 556207 557625 R GTP binding protein complement(556207..557625) Chlamydophila pneumoniae CWL029 895633 NP_224675.1 CDS phnP NC_000922.1 557613 558425 R metal dependent hydrolase complement(557613..558425) Chlamydophila pneumoniae CWL029 895664 NP_224676.1 CDS CPn0480 NC_000922.1 558647 559303 R hypothetical protein complement(558647..559303) Chlamydophila pneumoniae CWL029 895668 NP_224677.1 CDS CPn0481 NC_000922.1 559336 560946 R hypothetical protein complement(559336..560946) Chlamydophila pneumoniae CWL029 895688 NP_224678.1 CDS artJ NC_000922.1 560958 561737 R arginine periplasmic binding protein complement(560958..561737) Chlamydophila pneumoniae CWL029 895494 NP_224679.1 CDS CPn0483 NC_000922.1 561836 564967 D hypothetical protein 561836..564967 Chlamydophila pneumoniae CWL029 895493 NP_224680.1 CDS aroG NC_000922.1 564970 565827 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase 564970..565827 Chlamydophila pneumoniae CWL029 895692 NP_224681.1 CDS CPn0485 NC_000922.1 566038 566232 D hypothetical protein 566038..566232 Chlamydophila pneumoniae CWL029 895495 NP_224682.1 CDS CPn0486 NC_000922.1 566402 567784 R proline permease complement(566402..567784) Chlamydophila pneumoniae CWL029 895220 NP_224683.1 CDS CPn0487 NC_000922.1 568109 569740 R hypothetical protein complement(568109..569740) Chlamydophila pneumoniae CWL029 895301 NP_224684.1 CDS ycfF NC_000922.1 569764 570096 R HIT family hydrolase complement(569764..570096) Chlamydophila pneumoniae CWL029 895284 NP_224685.1 CDS CPn0489 NC_000922.1 570093 570965 R hypothetical protein complement(570093..570965) Chlamydophila pneumoniae CWL029 895221 NP_224686.1 CDS CPn0490 NC_000922.1 571279 573336 D hypothetical protein 571279..573336 Chlamydophila pneumoniae CWL029 895219 NP_224687.1 CDS CPn0491 NC_000922.1 573333 574352 R hypothetical protein complement(573333..574352) Chlamydophila pneumoniae CWL029 895285 NP_224688.1 CDS CPn0492 NC_000922.1 574652 574807 D hypothetical protein 574652..574807 Chlamydophila pneumoniae CWL029 895114 NP_224689.1 CDS CPn0493 NC_000922.1 574852 575004 R hypothetical protein complement(574852..575004) Chlamydophila pneumoniae CWL029 895222 NP_224690.1 CDS CPn0494 NC_000922.1 575143 575364 R hypothetical protein complement(575143..575364) Chlamydophila pneumoniae CWL029 895447 NP_224691.1 CDS aspC NC_000922.1 575603 576796 D catalyzes the interconversion of tetrahydrodipicolinate and L,L-diaminopimelate in lysine biosynthesis; L,L-diaminopimelate aminotransferase 575603..576796 Chlamydophila pneumoniae CWL029 895445 NP_224692.1 CDS CPn0496 NC_000922.1 576793 577815 D hypothetical protein 576793..577815 Chlamydophila pneumoniae CWL029 895446 NP_224693.1 CDS CPn0497 NC_000922.1 577817 578089 R hypothetical protein complement(577817..578089) Chlamydophila pneumoniae CWL029 895691 NP_224694.1 CDS CPn0498 NC_000922.1 578082 579035 R hypothetical protein complement(578082..579035) Chlamydophila pneumoniae CWL029 895444 NP_224695.1 CDS CPn0499 NC_000922.1 579202 580359 R hypothetical protein complement(579202..580359) Chlamydophila pneumoniae CWL029 895443 NP_224696.1 CDS proS NC_000922.1 580659 582365 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 580659..582365 Chlamydophila pneumoniae CWL029 895393 NP_224697.1 CDS hrcA NC_000922.1 582457 583653 D Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 582457..583653 Chlamydophila pneumoniae CWL029 894870 NP_224698.1 CDS grpE NC_000922.1 583650 584204 D HSP-70 cofactor 583650..584204 Chlamydophila pneumoniae CWL029 895327 NP_224699.1 CDS dnaK NC_000922.1 584234 586216 D heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 584234..586216 Chlamydophila pneumoniae CWL029 894942 NP_224700.1 CDS vacB NC_000922.1 586487 588517 D ribonuclease 586487..588517 Chlamydophila pneumoniae CWL029 895326 NP_224701.1 CDS CPn0505 NC_000922.1 588519 589109 D 3-methyladenine DNA glycosylase 588519..589109 Chlamydophila pneumoniae CWL029 895324 NP_224702.1 CDS CPn0506 NC_000922.1 589172 589843 D hypothetical protein 589172..589843 Chlamydophila pneumoniae CWL029 895325 NP_224703.1 CDS CPn0507 NC_000922.1 589961 590125 D hypothetical protein 589961..590125 Chlamydophila pneumoniae CWL029 895442 NP_224704.1 CDS CPn0508 NC_000922.1 590142 590303 D hypothetical protein 590142..590303 Chlamydophila pneumoniae CWL029 895488 NP_224705.1 CDS CPn0509 NC_000922.1 590335 590811 D metalloprotein 590335..590811 Chlamydophila pneumoniae CWL029 895349 NP_224706.1 CDS tlyC_2 NC_000922.1 590813 591976 D hemolysin 590813..591976 Chlamydophila pneumoniae CWL029 895392 NP_224707.1 CDS rsbV_1 NC_000922.1 592141 592491 D sigma regulatory factor 592141..592491 Chlamydophila pneumoniae CWL029 894861 NP_224708.1 CDS CPn0512 NC_000922.1 592553 594415 D hypothetical protein 592553..594415 Chlamydophila pneumoniae CWL029 894858 NP_224709.1 CDS CPn0513 NC_000922.1 594647 595756 D hypothetical protein 594647..595756 Chlamydophila pneumoniae CWL029 895654 NP_224710.1 CDS CPn0514 NC_000922.1 595729 596523 D hypothetical protein 595729..596523 Chlamydophila pneumoniae CWL029 895365 NP_224711.2 CDS ubiE NC_000922.1 596471 597184 D Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 596471..597184 Chlamydophila pneumoniae CWL029 895348 NP_224712.1 CDS CPn0516 NC_000922.1 597252 598814 R hypothetical protein complement(597252..598814) Chlamydophila pneumoniae CWL029 895487 NP_224713.1 CDS CPn0517 NC_000922.1 598792 599631 R hypothetical protein complement(598792..599631) Chlamydophila pneumoniae CWL029 895300 NP_224714.1 CDS CPn0518 NC_000922.1 599829 600803 R hypothetical protein complement(599829..600803) Chlamydophila pneumoniae CWL029 895364 NP_224715.1 CDS dapF NC_000922.1 600901 601674 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(600901..601674) Chlamydophila pneumoniae CWL029 895298 NP_224716.1 CDS clpP_1 NC_000922.1 601643 602218 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(601643..602218) Chlamydophila pneumoniae CWL029 895481 NP_224717.1 CDS glyA NC_000922.1 602238 603797 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(602238..603797) Chlamydophila pneumoniae CWL029 895462 NP_224718.1 CDS hemD NC_000922.1 603987 604658 D catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 603987..604658 Chlamydophila pneumoniae CWL029 895480 NP_224719.1 CDS CPn0523 NC_000922.1 604723 605055 D hypothetical protein 604723..605055 Chlamydophila pneumoniae CWL029 895463 NP_224720.1 CDS CPn0524 NC_000922.1 605103 606182 D hypothetical protein 605103..606182 Chlamydophila pneumoniae CWL029 895461 NP_224721.1 CDS CPn0525 NC_000922.1 606522 607286 D hypothetical protein 606522..607286 Chlamydophila pneumoniae CWL029 895419 NP_224722.1 CDS kpsF NC_000922.1 607707 608696 R GutQ/KpsF family sugar-P isomerase complement(607707..608696) Chlamydophila pneumoniae CWL029 895418 NP_224723.1 CDS sucB_2 NC_000922.1 608723 609904 R Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA; branched-chain alpha-keto acid dehydrogenase subunit E2 complement(608723..609904) Chlamydophila pneumoniae CWL029 895408 NP_224724.1 CDS gltT NC_000922.1 609918 611162 R glutamate symporter complement(609918..611162) Chlamydophila pneumoniae CWL029 895407 NP_224725.1 CDS lpxK NC_000922.1 611162 612259 R transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase complement(611162..612259) Chlamydophila pneumoniae CWL029 895386 NP_224726.1 CDS spoU_1 NC_000922.1 612457 613254 R rRNA methylase complement(612457..613254) Chlamydophila pneumoniae CWL029 895385 NP_224727.1 CDS CPn0531 NC_000922.1 613242 614069 R SAM-dependent methyltransferase complement(613242..614069) Chlamydophila pneumoniae CWL029 895318 NP_224728.1 CDS ribC NC_000922.1 614072 614674 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(614072..614674) Chlamydophila pneumoniae CWL029 895387 NP_224729.1 CDS nrdR NC_000922.1 614930 615388 D NrdR family transcriptional regulator 614930..615388 Chlamydophila pneumoniae CWL029 895292 NP_224730.1 CDS dksA NC_000922.1 615413 615787 D DnaK suppressor 615413..615787 Chlamydophila pneumoniae CWL029 895299 NP_224731.1 CDS lspA NC_000922.1 615793 616299 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 615793..616299 Chlamydophila pneumoniae CWL029 895384 NP_224732.1 CDS dagA_1 NC_000922.1 616345 617694 D D-Ala/Gly permease 616345..617694 Chlamydophila pneumoniae CWL029 895266 NP_224733.1 CDS CPn0537 NC_000922.1 617833 618192 D hypothetical protein 617833..618192 Chlamydophila pneumoniae CWL029 895262 NP_224734.1 CDS CPn0538 NC_000922.1 618212 618514 D hypothetical protein 618212..618514 Chlamydophila pneumoniae CWL029 895264 NP_224735.1 CDS pmp_19 NC_000922.1 618705 621548 D hypothetical protein 618705..621548 Chlamydophila pneumoniae CWL029 895263 NP_224736.1 CDS pmp_20 NC_000922.1 621694 626865 D hypothetical protein 621694..626865 Chlamydophila pneumoniae CWL029 895491 NP_224737.1 CDS CPn0541 NC_000922.1 627170 628006 D solute-binding protein 627170..628006 Chlamydophila pneumoniae CWL029 895486 NP_224738.1 CDS CPn0542 NC_000922.1 628003 628740 D ABC transporter ATPase 628003..628740 Chlamydophila pneumoniae CWL029 895485 NP_224739.1 CDS CPn0543 NC_000922.1 628725 629606 D metal transport protein 628725..629606 Chlamydophila pneumoniae CWL029 895265 NP_224740.1 CDS obgE NC_000922.1 629522 630529 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(629522..630529) Chlamydophila pneumoniae CWL029 895479 NP_224741.1 CDS rpmA NC_000922.1 630630 630884 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(630630..630884) Chlamydophila pneumoniae CWL029 895484 NP_224742.1 CDS rplU NC_000922.1 630909 631229 R 50S ribosomal protein L21 complement(630909..631229) Chlamydophila pneumoniae CWL029 895453 NP_224743.1 CDS ispF NC_000922.1 631661 632191 D catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 631661..632191 Chlamydophila pneumoniae CWL029 895434 NP_224744.1 CDS cysJ NC_000922.1 632188 633231 R sulfite reductase complement(632188..633231) Chlamydophila pneumoniae CWL029 895319 NP_224745.1 CDS rpsJ NC_000922.1 633252 633569 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(633252..633569) Chlamydophila pneumoniae CWL029 895435 NP_224746.1 CDS fusA NC_000922.1 633577 635661 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(633577..635661) Chlamydophila pneumoniae CWL029 895425 NP_224747.1 CDS rs7 NC_000922.1 635695 636168 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(635695..636168) Chlamydophila pneumoniae CWL029 895452 NP_224748.1 CDS rpsL NC_000922.1 636216 636587 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(636216..636587) Chlamydophila pneumoniae CWL029 895436 NP_224749.1 CDS CPn0553 NC_000922.1 636809 637747 R hypothetical protein complement(636809..637747) Chlamydophila pneumoniae CWL029 895412 NP_224750.1 CDS CPn0554 NC_000922.1 637854 638144 D hypothetical protein 637854..638144 Chlamydophila pneumoniae CWL029 895424 NP_224751.1 CDS tsp NC_000922.1 638298 640244 D tail-specific protease 638298..640244 Chlamydophila pneumoniae CWL029 895414 NP_224752.1 CDS crpA NC_000922.1 640322 640912 R hypothetical protein complement(640322..640912) Chlamydophila pneumoniae CWL029 895413 NP_224753.1 CDS omcB NC_000922.1 641191 642861 R hypothetical protein complement(641191..642861) Chlamydophila pneumoniae CWL029 895362 NP_224754.1 CDS omcA NC_000922.1 643028 643300 R hypothetical protein complement(643028..643300) Chlamydophila pneumoniae CWL029 895361 NP_224755.1 CDS CPn0559 NC_000922.1 643742 643930 D hypothetical protein 643742..643930 Chlamydophila pneumoniae CWL029 895360 NP_224756.1 CDS gltX NC_000922.1 644095 645612 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(644095..645612) Chlamydophila pneumoniae CWL029 895358 NP_224757.1 CDS euo NC_000922.1 645868 646404 R hypothetical protein complement(645868..646404) Chlamydophila pneumoniae CWL029 895357 NP_224758.1 CDS CPn0562 NC_000922.1 646915 648036 R hypothetical protein complement(646915..648036) Chlamydophila pneumoniae CWL029 895356 NP_224759.1 CDS recJ NC_000922.1 648290 650056 R ssDNA exonuclease RecJ complement(648290..650056) Chlamydophila pneumoniae CWL029 895355 NP_224760.1 CDS secD/secF NC_000922.1 650142 654350 R part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; in these organisms there is an unknown N-terminal domain; preprotein translocase subunits SecD/SecF complement(650142..654350) Chlamydophila pneumoniae CWL029 895347 NP_224761.1 CDS CPn0565 NC_000922.1 654530 655630 R hypothetical protein complement(654530..655630) Chlamydophila pneumoniae CWL029 895346 NP_224762.1 CDS yaeS NC_000922.1 656141 656893 D catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; UDP pyrophosphate synthase 656141..656893 Chlamydophila pneumoniae CWL029 895338 NP_224763.1 CDS cdsA NC_000922.1 656894 657820 D phosphatidate cytidylyltransferase 656894..657820 Chlamydophila pneumoniae CWL029 895339 NP_224764.1 CDS cmk NC_000922.1 657817 658467 D Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 657817..658467 Chlamydophila pneumoniae CWL029 895337 NP_224765.1 CDS plsC NC_000922.1 658464 659102 D glycerol-3-P acyltransferase 658464..659102 Chlamydophila pneumoniae CWL029 895321 NP_224766.1 CDS argS NC_000922.1 659107 660792 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 659107..660792 Chlamydophila pneumoniae CWL029 895322 NP_224767.1 CDS murA NC_000922.1 660746 662122 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(660746..662122) Chlamydophila pneumoniae CWL029 895311 NP_224768.1 CDS CPn0572 NC_000922.1 662352 664619 D hypothetical protein 662352..664619 Chlamydophila pneumoniae CWL029 895313 NP_224769.1 CDS yebC NC_000922.1 664688 665404 R hypothetical protein complement(664688..665404) Chlamydophila pneumoniae CWL029 895275 NP_224770.1 CDS CPn0574 NC_000922.1 665391 665945 R hypothetical protein complement(665391..665945) Chlamydophila pneumoniae CWL029 895454 NP_224771.1 CDS yhhY NC_000922.1 665979 666494 R amino group Acetyl transferase complement(665979..666494) Chlamydophila pneumoniae CWL029 895258 NP_224772.1 CDS prfB NC_000922.1 666491 667598 R recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 complement(join(666491..667531,667530..667598)) Chlamydophila pneumoniae CWL029 894762 NP_224773.1 CDS CPn0577 NC_000922.1 667895 668158 D SWIB (YM74) complex protein 667895..668158 Chlamydophila pneumoniae CWL029 895259 NP_224774.1 CDS yaeI NC_000922.1 668406 669368 D phosphohydrolase 668406..669368 Chlamydophila pneumoniae CWL029 895257 NP_224775.1 CDS ispD NC_000922.1 669361 669996 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 669361..669996 Chlamydophila pneumoniae CWL029 895471 NP_224776.1 CDS truA NC_000922.1 669993 670796 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 669993..670796 Chlamydophila pneumoniae CWL029 895457 NP_224777.1 CDS CPn0581 NC_000922.1 670742 671434 R phosphoglycolate phosphatase complement(670742..671434) Chlamydophila pneumoniae CWL029 895456 NP_224778.1 CDS CPn0582 NC_000922.1 671503 672180 D hypothetical protein 671503..672180 Chlamydophila pneumoniae CWL029 895312 NP_224779.1 CDS CPn0583 NC_000922.1 672400 672720 D hypothetical protein 672400..672720 Chlamydophila pneumoniae CWL029 895451 NP_224780.1 CDS atoS NC_000922.1 672707 673801 D two component sensor protein 672707..673801 Chlamydophila pneumoniae CWL029 895448 NP_224781.1 CDS CPn0585 NC_000922.1 673862 675817 R hypothetical protein complement(673862..675817) Chlamydophila pneumoniae CWL029 895455 NP_224782.1 CDS atoC NC_000922.1 676026 677186 D two component regulator 676026..677186 Chlamydophila pneumoniae CWL029 895473 NP_224783.1 CDS yvyD NC_000922.1 677441 678127 D hypothetical protein 677441..678127 Chlamydophila pneumoniae CWL029 895367 NP_224784.1 CDS CPn0588 NC_000922.1 678084 678629 D hypothetical protein 678084..678629 Chlamydophila pneumoniae CWL029 895450 NP_224785.1 CDS recO NC_000922.1 678640 679398 D involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 678640..679398 Chlamydophila pneumoniae CWL029 895380 NP_224786.1 CDS CPn0590 NC_000922.1 679513 680112 R hypothetical protein complement(679513..680112) Chlamydophila pneumoniae CWL029 895368 NP_224787.1 CDS yagE NC_000922.1 680373 681023 D YagE family protein 680373..681023 Chlamydophila pneumoniae CWL029 895359 NP_224788.1 CDS yidD NC_000922.1 681153 681464 D hypothetical protein 681153..681464 Chlamydophila pneumoniae CWL029 895330 NP_224789.1 CDS CPn0593 NC_000922.1 681388 682476 R hypothetical protein complement(681388..682476) Chlamydophila pneumoniae CWL029 895379 NP_224790.1 CDS pheT NC_000922.1 682583 684961 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 682583..684961 Chlamydophila pneumoniae CWL029 895331 NP_224791.1 CDS CPn0595 NC_000922.1 684958 685929 D hypothetical protein 684958..685929 Chlamydophila pneumoniae CWL029 895333 NP_224792.1 CDS ada NC_000922.1 685939 686460 D methyltransferase 685939..686460 Chlamydophila pneumoniae CWL029 895307 NP_224793.1 CDS oppC_2 NC_000922.1 686476 688215 R oligopeptide permease complement(686476..688215) Chlamydophila pneumoniae CWL029 895309 NP_224794.1 CDS oppB_2 NC_000922.1 688216 689697 R oligopeptide permease complement(688216..689697) Chlamydophila pneumoniae CWL029 895308 NP_224795.1 CDS oppA_5 NC_000922.1 689679 691802 R oligopeptide binding lipoprotein complement(689679..691802) Chlamydophila pneumoniae CWL029 895277 NP_224796.1 CDS CPn0600 NC_000922.1 691824 692147 R hypothetical protein complement(691824..692147) Chlamydophila pneumoniae CWL029 895276 NP_224797.1 CDS CPn0601 NC_000922.1 692733 693053 R hypothetical protein complement(692733..693053) Chlamydophila pneumoniae CWL029 895244 NP_224798.1 CDS CPn0602 NC_000922.1 693101 694105 R hypothetical protein complement(693101..694105) Chlamydophila pneumoniae CWL029 895243 NP_224799.1 CDS hemH NC_000922.1 694205 695188 D protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 694205..695188 Chlamydophila pneumoniae CWL029 895242 NP_224800.1 CDS fliY NC_000922.1 695193 695945 R glutamine-binding protein complement(695193..695945) Chlamydophila pneumoniae CWL029 895236 NP_224801.1 CDS yhhF NC_000922.1 696147 696707 R methylase complement(696147..696707) Chlamydophila pneumoniae CWL029 895235 NP_224802.1 CDS CPn0606 NC_000922.1 696704 697444 R hypothetical protein complement(696704..697444) Chlamydophila pneumoniae CWL029 895234 NP_224803.1 CDS glgC NC_000922.1 697570 698895 R glucose-1-phosphate adenylyltransferase complement(697570..698895) Chlamydophila pneumoniae CWL029 895476 NP_224804.1 CDS CPn0608 NC_000922.1 699013 699645 R catalyzes the formation of orotidine monophosphate from 5-phosphoribosyl-1-pyrophosphate and orotate; orotate phosphoribosyltransferase complement(699013..699645) Chlamydophila pneumoniae CWL029 895475 NP_224805.1 CDS CPn0609 NC_000922.1 699705 699989 D hypothetical protein 699705..699989 Chlamydophila pneumoniae CWL029 895470 NP_224806.1 CDS rho NC_000922.1 700026 701420 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(700026..701420) Chlamydophila pneumoniae CWL029 895466 NP_224807.1 CDS coaE NC_000922.1 701417 702025 R catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase complement(701417..702025) Chlamydophila pneumoniae CWL029 895469 NP_224808.1 CDS polA NC_000922.1 702019 704631 R has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I complement(702019..704631) Chlamydophila pneumoniae CWL029 895332 NP_224809.1 CDS sohB NC_000922.1 704655 705656 R protease complement(704655..705656) Chlamydophila pneumoniae CWL029 895467 NP_224810.1 CDS adt_2 NC_000922.1 705780 707402 R ADP/ATP translocase complement(705780..707402) Chlamydophila pneumoniae CWL029 895433 NP_224811.1 CDS pgsA_1 NC_000922.1 707631 708137 R glycerol-3-P phosphatidyltransferase complement(707631..708137) Chlamydophila pneumoniae CWL029 895432 NP_224812.1 CDS dnaB NC_000922.1 708791 710140 D unwinds double stranded DNA; replicative DNA helicase 708791..710140 Chlamydophila pneumoniae CWL029 895465 NP_224813.1 CDS gidA NC_000922.1 710484 712319 D GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 710484..712319 Chlamydophila pneumoniae CWL029 895416 NP_224814.1 CDS lplA_2 NC_000922.1 712306 713013 D lipoate-protein ligase A 712306..713013 Chlamydophila pneumoniae CWL029 895415 NP_224815.1 CDS ndk NC_000922.1 713010 713444 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(713010..713444) Chlamydophila pneumoniae CWL029 895417 NP_224816.1 CDS ruvA NC_000922.1 713516 714139 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(713516..714139) Chlamydophila pneumoniae CWL029 895411 NP_224817.1 CDS ruvC NC_000922.1 714141 714647 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(714141..714647) Chlamydophila pneumoniae CWL029 895409 NP_224818.1 CDS CPn0622 NC_000922.1 714790 715752 R hypothetical protein complement(714790..715752) Chlamydophila pneumoniae CWL029 895410 NP_224819.1 CDS CPn0623 NC_000922.1 716160 716993 R hypothetical protein complement(716160..716993) Chlamydophila pneumoniae CWL029 895405 NP_224820.1 CDS gapA NC_000922.1 717008 718015 R catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase complement(717008..718015) Chlamydophila pneumoniae CWL029 895404 NP_224821.1 CDS rplQ NC_000922.1 718057 718485 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(718057..718485) Chlamydophila pneumoniae CWL029 895406 NP_224822.1 CDS rpoA NC_000922.1 718492 719616 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(718492..719616) Chlamydophila pneumoniae CWL029 895399 NP_224823.1 CDS rs11 NC_000922.1 719637 720038 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(719637..720038) Chlamydophila pneumoniae CWL029 895398 NP_224824.1 CDS rpsM NC_000922.1 720060 720428 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(720060..720428) Chlamydophila pneumoniae CWL029 895390 NP_224825.1 CDS secY NC_000922.1 720484 721857 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(720484..721857) Chlamydophila pneumoniae CWL029 895464 NP_224826.1 CDS rplO NC_000922.1 721882 722316 R late assembly protein; 50S ribosomal protein L15 complement(721882..722316) Chlamydophila pneumoniae CWL029 895389 NP_224827.1 CDS rpsE NC_000922.1 722309 722806 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(722309..722806) Chlamydophila pneumoniae CWL029 895381 NP_224828.1 CDS rplR NC_000922.1 722824 723195 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(722824..723195) Chlamydophila pneumoniae CWL029 895391 NP_224829.1 CDS rplF NC_000922.1 723206 723757 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(723206..723757) Chlamydophila pneumoniae CWL029 895377 NP_224830.1 CDS rpsH NC_000922.1 723784 724185 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(723784..724185) Chlamydophila pneumoniae CWL029 895376 NP_224831.1 CDS rplE NC_000922.1 724203 724745 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(724203..724745) Chlamydophila pneumoniae CWL029 895378 NP_224832.1 CDS rplX NC_000922.1 724747 725082 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(724747..725082) Chlamydophila pneumoniae CWL029 895353 NP_224833.1 CDS rplN NC_000922.1 725096 725464 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(725096..725464) Chlamydophila pneumoniae CWL029 895382 NP_224834.1 CDS rpsQ NC_000922.1 725487 725747 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(725487..725747) Chlamydophila pneumoniae CWL029 895352 NP_224835.1 CDS rpmC NC_000922.1 725740 725958 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(725740..725958) Chlamydophila pneumoniae CWL029 895351 NP_224836.1 CDS rplP NC_000922.1 725961 726377 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(725961..726377) Chlamydophila pneumoniae CWL029 895334 NP_224837.1 CDS rpsC NC_000922.1 726406 727077 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(726406..727077) Chlamydophila pneumoniae CWL029 895354 NP_224838.1 CDS rplV NC_000922.1 727093 727428 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(727093..727428) Chlamydophila pneumoniae CWL029 895336 NP_224839.1 CDS rpsS NC_000922.1 727447 727713 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(727447..727713) Chlamydophila pneumoniae CWL029 895350 NP_224840.1 CDS rplB NC_000922.1 727719 728573 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(727719..728573) Chlamydophila pneumoniae CWL029 895335 NP_224841.1 CDS rplW NC_000922.1 728595 728930 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(728595..728930) Chlamydophila pneumoniae CWL029 895316 NP_224842.1 CDS rplD NC_000922.1 728947 729621 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(728947..729621) Chlamydophila pneumoniae CWL029 895289 NP_224843.2 CDS rplC NC_000922.1 729654 730313 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(729654..730313) Chlamydophila pneumoniae CWL029 895317 NP_224844.1 CDS CPn0648 NC_000922.1 730602 731603 R hypothetical protein complement(730602..731603) Chlamydophila pneumoniae CWL029 895288 NP_224845.1 CDS fmt NC_000922.1 731707 732672 R modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase complement(731707..732672) Chlamydophila pneumoniae CWL029 895283 NP_224846.1 CDS lpxA NC_000922.1 732662 733501 R catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase complement(732662..733501) Chlamydophila pneumoniae CWL029 895282 NP_224847.1 CDS fabZ NC_000922.1 733514 733975 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(733514..733975) Chlamydophila pneumoniae CWL029 895281 NP_224848.1 CDS lpxC NC_000922.1 733987 734835 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(733987..734835) Chlamydophila pneumoniae CWL029 895280 NP_224849.1 CDS lnt NC_000922.1 734865 736490 R Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase complement(734865..736490) Chlamydophila pneumoniae CWL029 895279 NP_224850.1 CDS yciA NC_000922.1 736500 736967 R acyl-CoA thioesterase complement(736500..736967) Chlamydophila pneumoniae CWL029 895278 NP_224851.1 CDS dnaQ_2 NC_000922.1 737098 737847 R 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon complement(737098..737847) Chlamydophila pneumoniae CWL029 895273 NP_224853.1 CDS yjeE NC_000922.1 738048 738473 R hypothetical protein complement(738048..738473) Chlamydophila pneumoniae CWL029 895271 NP_224854.1 CDS CPn0658 NC_000922.1 738452 739168 R hypothetical protein complement(738452..739168) Chlamydophila pneumoniae CWL029 895290 NP_224855.1 CDS trxA NC_000922.1 739533 739841 D thioredoxin 739533..739841 Chlamydophila pneumoniae CWL029 895251 NP_224856.1 CDS spoU_2 NC_000922.1 739857 740327 R rRNA methylase complement(739857..740327) Chlamydophila pneumoniae CWL029 895254 NP_224857.1 CDS mip NC_000922.1 740324 741100 R FKBP-type peptidylprolyl isomerase complement(740324..741100) Chlamydophila pneumoniae CWL029 895248 NP_224858.1 CDS aspS NC_000922.1 741169 742923 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(741169..742923) Chlamydophila pneumoniae CWL029 895247 NP_224859.1 CDS hisS NC_000922.1 742898 744190 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(742898..744190) Chlamydophila pneumoniae CWL029 895245 NP_224860.1 CDS CPn0664 NC_000922.1 744554 744757 R hypothetical protein complement(744554..744757) Chlamydophila pneumoniae CWL029 895246 NP_224861.1 CDS uhpC NC_000922.1 745001 746368 D hexosphosphate transport 745001..746368 Chlamydophila pneumoniae CWL029 895238 NP_224862.1 CDS dnaE NC_000922.1 746388 750110 D catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 746388..750110 Chlamydophila pneumoniae CWL029 895233 NP_224863.1 CDS CPn0667 NC_000922.1 750174 751058 R hypothetical protein complement(750174..751058) Chlamydophila pneumoniae CWL029 895239 NP_224864.1 CDS CPn0668 NC_000922.1 751209 752165 D hypothetical protein 751209..752165 Chlamydophila pneumoniae CWL029 895237 NP_224865.1 CDS CPn0669 NC_000922.1 752179 752778 D hypothetical protein 752179..752778 Chlamydophila pneumoniae CWL029 895232 NP_224866.1 CDS rsbW NC_000922.1 752765 753199 D sigma regulatory factor-histidine kinase 752765..753199 Chlamydophila pneumoniae CWL029 895482 NP_224867.1 CDS CPn0671 NC_000922.1 753202 753630 R hypothetical protein complement(753202..753630) Chlamydophila pneumoniae CWL029 895255 NP_224868.1 CDS dacF NC_000922.1 753741 755051 D D-Ala-D-Ala carboxypeptidase 753741..755051 Chlamydophila pneumoniae CWL029 895460 NP_224869.1 CDS CPn0673 NC_000922.1 755287 755466 D hypothetical protein 755287..755466 Chlamydophila pneumoniae CWL029 895441 NP_224870.1 CDS fmu NC_000922.1 755574 756668 R RNA methyltransferase complement(755574..756668) Chlamydophila pneumoniae CWL029 895422 NP_224871.1 CDS CPn0675 NC_000922.1 756765 757919 R hypothetical protein complement(756765..757919) Chlamydophila pneumoniae CWL029 895459 NP_224872.1 CDS CPn0676 NC_000922.1 758048 759217 R hypothetical protein complement(758048..759217) Chlamydophila pneumoniae CWL029 895439 NP_224873.1 CDS CPn0677 NC_000922.1 759253 760401 R hypothetical protein complement(759253..760401) Chlamydophila pneumoniae CWL029 895440 NP_224874.1 CDS CPn0678 NC_000922.1 760679 761320 R hypothetical protein complement(760679..761320) Chlamydophila pneumoniae CWL029 895420 NP_224875.1 CDS pgk NC_000922.1 761722 762930 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(761722..762930) Chlamydophila pneumoniae CWL029 895421 NP_224876.1 CDS ygo4 NC_000922.1 762968 764248 R phosphate permease complement(762968..764248) Chlamydophila pneumoniae CWL029 895403 NP_224877.1 CDS CPn0681 NC_000922.1 764255 764929 R hypothetical protein complement(764255..764929) Chlamydophila pneumoniae CWL029 895402 NP_224878.1 CDS dppD NC_000922.1 764984 765958 D peptide ABC transporter ATPase 764984..765958 Chlamydophila pneumoniae CWL029 895396 NP_224879.1 CDS dppF_2 NC_000922.1 765948 766922 D peptide ABC transporter ATPase 765948..766922 Chlamydophila pneumoniae CWL029 895401 NP_224880.1 CDS parB NC_000922.1 767178 768038 R chromosome partitioning protein complement(767178..768038) Chlamydophila pneumoniae CWL029 895395 NP_224882.1 CDS CPn0686 NC_000922.1 768173 768361 R hypothetical protein complement(768173..768361) Chlamydophila pneumoniae CWL029 895400 NP_224883.1 CDS CPn0687 NC_000922.1 768564 769217 D hypothetical protein 768564..769217 Chlamydophila pneumoniae CWL029 895371 NP_224884.1 CDS CPn0688 NC_000922.1 769382 770140 D hypothetical protein 769382..770140 Chlamydophila pneumoniae CWL029 895344 NP_224885.1 CDS yfhO_1 NC_000922.1 770184 771404 R NifS-like aminotransferase complement(770184..771404) Chlamydophila pneumoniae CWL029 895369 NP_224886.1 CDS CPn0690 NC_000922.1 771433 772680 R ABC transporter complement(771433..772680) Chlamydophila pneumoniae CWL029 895342 NP_224887.1 CDS abcX NC_000922.1 772682 773452 R ABC transporter ATPase complement(772682..773452) Chlamydophila pneumoniae CWL029 895343 NP_224888.1 CDS CPn0692 NC_000922.1 773458 774912 R with SufCD activates cysteine desulfurase SufS; cysteine desulfurase complement(773458..774912) Chlamydophila pneumoniae CWL029 895483 NP_224889.1 CDS CPn0693 NC_000922.1 775237 776256 R hypothetical protein complement(775237..776256) Chlamydophila pneumoniae CWL029 895304 NP_224890.1 CDS pbp2 NC_000922.1 776327 779599 R PBP2-transglycosylase/transpeptidase complement(776327..779599) Chlamydophila pneumoniae CWL029 895297 NP_224891.1 CDS ompA NC_000922.1 780216 781385 D major outer membrane protein 780216..781385 Chlamydophila pneumoniae CWL029 895370 NP_224892.1 CDS rpsB NC_000922.1 781769 782602 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 781769..782602 Chlamydophila pneumoniae CWL029 895296 NP_224893.1 CDS tsf NC_000922.1 782602 783450 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 782602..783450 Chlamydophila pneumoniae CWL029 895295 NP_224894.1 CDS pyrH NC_000922.1 783458 784204 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 783458..784204 Chlamydophila pneumoniae CWL029 895268 NP_224895.1 CDS frr NC_000922.1 784182 784724 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 784182..784724 Chlamydophila pneumoniae CWL029 895241 NP_224896.1 CDS CPn0700 NC_000922.1 785097 785612 D hypothetical protein 785097..785612 Chlamydophila pneumoniae CWL029 895240 NP_224897.1 CDS karG NC_000922.1 785599 786675 D ATP:guanido phosphotransferase 785599..786675 Chlamydophila pneumoniae CWL029 895226 NP_224898.1 CDS yscC NC_000922.1 786926 789685 R Yop proteins translocation protein C/general secretion pathway protein complement(786926..789685) Chlamydophila pneumoniae CWL029 895225 NP_224899.1 CDS CPn0703 NC_000922.1 789682 791190 R S/T protein kinase complement(789682..791190) Chlamydophila pneumoniae CWL029 895224 NP_224900.1 CDS fliN NC_000922.1 791206 792321 R type III secretion system protein complement(791206..792321) Chlamydophila pneumoniae CWL029 895428 NP_224901.1 CDS CPn0705 NC_000922.1 792331 793173 R hypothetical protein complement(792331..793173) Chlamydophila pneumoniae CWL029 895287 NP_224902.1 CDS CPn0706 NC_000922.1 793177 793683 R hypothetical protein complement(793177..793683) Chlamydophila pneumoniae CWL029 895426 NP_224903.1 CDS yscN NC_000922.1 793701 795029 R type III secretion system ATPase complement(793701..795029) Chlamydophila pneumoniae CWL029 895269 NP_224904.1 CDS CPn0708 NC_000922.1 795031 795705 R hypothetical protein complement(795031..795705) Chlamydophila pneumoniae CWL029 895286 NP_224905.1 CDS CPn0709 NC_000922.1 795739 796188 R hypothetical protein complement(795739..796188) Chlamydophila pneumoniae CWL029 895260 NP_224906.1 CDS CPn0710 NC_000922.1 796207 796461 R hypothetical protein complement(796207..796461) Chlamydophila pneumoniae CWL029 895427 NP_224907.1 CDS CPn0711 NC_000922.1 796483 796731 R hypothetical protein complement(796483..796731) Chlamydophila pneumoniae CWL029 895229 NP_224908.1 CDS CPn0712 NC_000922.1 796778 799315 R FHA domain-containing protein complement(796778..799315) Chlamydophila pneumoniae CWL029 895429 NP_224909.1 CDS CPn0713 NC_000922.1 799329 799721 R hypothetical protein complement(799329..799721) Chlamydophila pneumoniae CWL029 895230 NP_224910.1 CDS hemA NC_000922.1 800088 801107 R catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase complement(800088..801107) Chlamydophila pneumoniae CWL029 895228 NP_224911.1 CDS gyrB_2 NC_000922.1 801657 803465 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 801657..803465 Chlamydophila pneumoniae CWL029 894744 NP_224912.1 CDS gyrA_2 NC_000922.1 803469 804905 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 803469..804905 Chlamydophila pneumoniae CWL029 895509 NP_224913.1 CDS CPn0717 NC_000922.1 805010 805309 D hypothetical protein 805010..805309 Chlamydophila pneumoniae CWL029 894721 NP_224914.1 CDS CPn0718 NC_000922.1 805309 805629 D hypothetical protein 805309..805629 Chlamydophila pneumoniae CWL029 895306 NP_224915.1 CDS sfhB NC_000922.1 805916 806893 D pseudouridine synthase 805916..806893 Chlamydophila pneumoniae CWL029 894738 NP_224916.1 CDS CPn0720 NC_000922.1 807003 807239 D hypothetical protein 807003..807239 Chlamydophila pneumoniae CWL029 894736 NP_224917.1 CDS kdsA NC_000922.1 807683 808492 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 807683..808492 Chlamydophila pneumoniae CWL029 895556 NP_224918.1 CDS CPn0722 NC_000922.1 808489 808977 D hypothetical protein 808489..808977 Chlamydophila pneumoniae CWL029 894760 NP_224919.1 CDS yhbG NC_000922.1 808984 809706 D ABC transporter ATPase 808984..809706 Chlamydophila pneumoniae CWL029 894703 NP_224920.1 CDS CPn0724 NC_000922.1 809703 810527 R hypothetical protein complement(809703..810527) Chlamydophila pneumoniae CWL029 895517 NP_224921.1 CDS CPn0725 NC_000922.1 810584 810811 R hypothetical protein complement(810584..810811) Chlamydophila pneumoniae CWL029 895504 NP_224922.1 CDS CPn0726 NC_000922.1 810877 813372 R hypothetical protein complement(810877..813372) Chlamydophila pneumoniae CWL029 895566 NP_224923.1 CDS CPn0727 NC_000922.1 813577 816195 D hypothetical protein 813577..816195 Chlamydophila pneumoniae CWL029 895524 NP_224924.1 CDS CPn0728 NC_000922.1 816522 818477 R hypothetical protein complement(816522..818477) Chlamydophila pneumoniae CWL029 895505 NP_224925.1 CDS CPn0729 NC_000922.1 818589 819857 R hypothetical protein complement(818589..819857) Chlamydophila pneumoniae CWL029 894734 NP_224926.1 CDS mviN NC_000922.1 819960 821603 R hypothetical protein complement(819960..821603) Chlamydophila pneumoniae CWL029 895572 NP_224927.1 CDS CPn0731 NC_000922.1 821587 821763 D hypothetical protein 821587..821763 Chlamydophila pneumoniae CWL029 895519 NP_224928.1 CDS nfo NC_000922.1 822098 822979 D Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 822098..822979 Chlamydophila pneumoniae CWL029 895543 NP_224929.1 CDS rpsD NC_000922.1 823098 823727 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(823098..823727) Chlamydophila pneumoniae CWL029 894837 NP_224930.1 CDS yceA NC_000922.1 823944 824918 D hypothetical protein 823944..824918 Chlamydophila pneumoniae CWL029 894831 NP_224931.1 CDS CPn0735 NC_000922.1 825000 825668 R functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase complement(825000..825668) Chlamydophila pneumoniae CWL029 894758 NP_224932.1 CDS ygeD NC_000922.1 825989 827686 R efflux protein complement(825989..827686) Chlamydophila pneumoniae CWL029 895587 NP_224933.1 CDS recC NC_000922.1 827685 830759 D exodeoxyribonuclease V subunit gamma 827685..830759 Chlamydophila pneumoniae CWL029 894729 NP_224934.1 CDS recB NC_000922.1 830746 833898 D exodeoxyribonuclease V subunit beta 830746..833898 Chlamydophila pneumoniae CWL029 894853 NP_224935.1 CDS CPn0739 NC_000922.1 833858 834871 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(833858..834871) Chlamydophila pneumoniae CWL029 895575 NP_224936.1 CDS tyrB NC_000922.1 834861 836048 R catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase complement(834861..836048) Chlamydophila pneumoniae CWL029 895559 NP_224937.1 CDS greA NC_000922.1 836182 838350 R contains N-terminal domain of unknown function fused to transcription elongation factor; GreA is necessary for efficient RNA polymerization through arresting sites; cleaves the nascent transcript and allows resumption of transcription elongation; fused transcript cleavage factor/unknown domain-containing protein complement(836182..838350) Chlamydophila pneumoniae CWL029 895546 NP_224938.1 CDS CPn0742 NC_000922.1 838463 838891 D hypothetical protein 838463..838891 Chlamydophila pneumoniae CWL029 895531 NP_224939.1 CDS nqrA NC_000922.1 838962 840365 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 838962..840365 Chlamydophila pneumoniae CWL029 895539 NP_224940.1 CDS hemB NC_000922.1 840386 841384 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(840386..841384) Chlamydophila pneumoniae CWL029 895528 NP_224941.1 CDS CPn0745 NC_000922.1 841739 841903 R hypothetical protein complement(841739..841903) Chlamydophila pneumoniae CWL029 894830 NP_224942.1 CDS CPn0746 NC_000922.1 841975 843570 D hypothetical protein 841975..843570 Chlamydophila pneumoniae CWL029 894801 NP_224943.1 CDS ispA NC_000922.1 844118 844987 R geranyl transtransferase complement(844118..844987) Chlamydophila pneumoniae CWL029 894815 NP_224944.1 CDS glmU NC_000922.1 845003 845629 R UDP-GlcNAc pyrophosphorylase complement(845003..845629) Chlamydophila pneumoniae CWL029 894802 NP_224945.1 CDS tctD NC_000922.1 845704 846411 R HTH transcriptional regulator/receiver domain-containing protein complement(845704..846411) Chlamydophila pneumoniae CWL029 895521 NP_224946.1 CDS CPn0751 NC_000922.1 846608 848437 D hypothetical protein 846608..848437 Chlamydophila pneumoniae CWL029 894880 NP_224947.1 CDS recD_2 NC_000922.1 848604 850085 D exodeoxyribonuclease V subunit alpha 848604..850085 Chlamydophila pneumoniae CWL029 894888 NP_224948.1 CDS CPn0753 NC_000922.1 850158 851006 R hypothetical protein complement(850158..851006) Chlamydophila pneumoniae CWL029 894894 NP_224949.1 CDS rpsT NC_000922.1 851037 851336 R binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 complement(851037..851336) Chlamydophila pneumoniae CWL029 894899 NP_224950.1 CDS CPn0755 NC_000922.1 851597 852802 D hypothetical protein 851597..852802 Chlamydophila pneumoniae CWL029 894906 NP_224951.1 CDS rpoD NC_000922.1 852961 854679 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; RNA polymerase sigma factor 852961..854679 Chlamydophila pneumoniae CWL029 894915 NP_224952.1 CDS folX NC_000922.1 854733 855137 D dihydroneopterin aldolase 854733..855137 Chlamydophila pneumoniae CWL029 894921 NP_224953.1 CDS folP NC_000922.1 855110 856462 D dihydropteroate synthase 855110..856462 Chlamydophila pneumoniae CWL029 894959 NP_224954.1 CDS folA NC_000922.1 856488 857000 D dihydrofolate reductase 856488..857000 Chlamydophila pneumoniae CWL029 894934 NP_224955.1 CDS CPn0760 NC_000922.1 856957 857697 D hypothetical protein 856957..857697 Chlamydophila pneumoniae CWL029 894943 NP_224956.1 CDS CPn0761 NC_000922.1 857704 858378 D hypothetical protein 857704..858378 Chlamydophila pneumoniae CWL029 894950 NP_224957.1 CDS recA NC_000922.1 858536 859597 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(858536..859597) Chlamydophila pneumoniae CWL029 894964 NP_224958.1 CDS ygfA NC_000922.1 859969 860511 R formyltetrahydrofolate cycloligase complement(859969..860511) Chlamydophila pneumoniae CWL029 894974 NP_224959.1 CDS CPn0764 NC_000922.1 860521 861807 R hypothetical protein complement(860521..861807) Chlamydophila pneumoniae CWL029 894978 NP_224960.1 CDS CPn0765 NC_000922.1 861798 862382 R hypothetical protein complement(861798..862382) Chlamydophila pneumoniae CWL029 894986 NP_224961.1 CDS CPn0766 NC_000922.1 862391 863782 R hypothetical protein complement(862391..863782) Chlamydophila pneumoniae CWL029 894995 NP_224962.1 CDS CPn0767 NC_000922.1 863884 864180 D hypothetical protein 863884..864180 Chlamydophila pneumoniae CWL029 895006 NP_224963.1 CDS yohI NC_000922.1 864159 865166 D oxidoreductase 864159..865166 Chlamydophila pneumoniae CWL029 895018 NP_224964.1 CDS topA NC_000922.1 865118 867733 R catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I/SWI domain fusion protein complement(865118..867733) Chlamydophila pneumoniae CWL029 895036 NP_224965.1 CDS CPn0770 NC_000922.1 868340 869134 D hypothetical protein 868340..869134 Chlamydophila pneumoniae CWL029 895025 NP_224966.1 CDS rpoN NC_000922.1 869141 870463 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 complement(869141..870463) Chlamydophila pneumoniae CWL029 895043 NP_224967.1 CDS uvrD NC_000922.1 870466 872385 R DNA helicase complement(870466..872385) Chlamydophila pneumoniae CWL029 895052 NP_224968.1 CDS ung NC_000922.1 872488 873198 D Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 872488..873198 Chlamydophila pneumoniae CWL029 895046 NP_224969.1 CDS CPn0774 NC_000922.1 873195 873428 D hypothetical protein 873195..873428 Chlamydophila pneumoniae CWL029 895057 NP_224970.1 CDS yggV NC_000922.1 873411 874031 R HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase complement(873411..874031) Chlamydophila pneumoniae CWL029 895062 NP_224971.1 CDS CPn0776 NC_000922.1 874246 875490 D hypothetical protein 874246..875490 Chlamydophila pneumoniae CWL029 895069 NP_224972.1 CDS groEL NC_000922.1 875601 877181 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; molecular chaperone GorEL 875601..877181 Chlamydophila pneumoniae CWL029 895077 NP_224973.1 CDS ahpC NC_000922.1 877505 878095 D thio-specific antioxidant peroxidase 877505..878095 Chlamydophila pneumoniae CWL029 895087 NP_224974.1 CDS CPn0779 NC_000922.1 878092 878481 R hypothetical protein complement(878092..878481) Chlamydophila pneumoniae CWL029 895093 NP_224975.1 CDS amiB NC_000922.1 878588 879205 R N-acetylmuramoyl alanine amidase complement(878588..879205) Chlamydophila pneumoniae CWL029 895100 NP_224976.1 CDS pal NC_000922.1 879195 879773 R peptidoglycan-associated lipoprotein complement(879195..879773) Chlamydophila pneumoniae CWL029 895106 NP_224977.1 CDS tolB NC_000922.1 879770 881065 R forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB complement(879770..881065) Chlamydophila pneumoniae CWL029 895117 NP_224978.1 CDS CPn0783 NC_000922.1 881097 881885 R hypothetical protein complement(881097..881885) Chlamydophila pneumoniae CWL029 895124 NP_224979.1 CDS exbD NC_000922.1 881889 882296 R biopolymer transport protein complement(881889..882296) Chlamydophila pneumoniae CWL029 895131 NP_224980.1 CDS exbB NC_000922.1 882293 882991 R proton channel protein TolQ complement(882293..882991) Chlamydophila pneumoniae CWL029 895137 NP_224981.1 CDS dsbD NC_000922.1 883185 885296 D thiol:disulfide interchange protein 883185..885296 Chlamydophila pneumoniae CWL029 895512 NP_224982.1 CDS yabD NC_000922.1 885619 886404 D hydrolase 885619..886404 Chlamydophila pneumoniae CWL029 895562 NP_224983.1 CDS sdhC NC_000922.1 886542 887435 D succinate dehydrogenase 886542..887435 Chlamydophila pneumoniae CWL029 894789 NP_224984.1 CDS sdhA NC_000922.1 887439 889319 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 887439..889319 Chlamydophila pneumoniae CWL029 894788 NP_224985.1 CDS sdhB NC_000922.1 889330 890106 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 889330..890106 Chlamydophila pneumoniae CWL029 894785 NP_224986.1 CDS CPn0791 NC_000922.1 890108 893050 R hypothetical protein complement(890108..893050) Chlamydophila pneumoniae CWL029 894784 NP_224987.1 CDS CPn0792 NC_000922.1 893105 894919 R hypothetical protein complement(893105..894919) Chlamydophila pneumoniae CWL029 894786 NP_224988.1 CDS rbsU NC_000922.1 894916 896823 R sigma regulatory family PP2C phosphatase complement(894916..896823) Chlamydophila pneumoniae CWL029 894665 NP_224989.1 CDS CPn0794 NC_000922.1 897174 898007 D hypothetical protein 897174..898007 Chlamydophila pneumoniae CWL029 894702 NP_224990.1 CDS CPn0795 NC_000922.1 898128 899198 D hypothetical protein 898128..899198 Chlamydophila pneumoniae CWL029 894868 NP_224991.1 CDS CPn0796 NC_000922.1 899301 901343 D hypothetical protein 899301..901343 Chlamydophila pneumoniae CWL029 894753 NP_224992.1 CDS CPn0797 NC_000922.1 901600 902697 D hypothetical protein 901600..902697 Chlamydophila pneumoniae CWL029 894769 NP_224993.1 CDS CPn0798 NC_000922.1 902846 903859 D hypothetical protein 902846..903859 Chlamydophila pneumoniae CWL029 894663 NP_224994.1 CDS CPn0799 NC_000922.1 903937 904986 R hypothetical protein complement(903937..904986) Chlamydophila pneumoniae CWL029 895655 NP_224995.1 CDS eno NC_000922.1 905246 906532 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(905246..906532) Chlamydophila pneumoniae CWL029 894776 NP_224996.1 CDS uvrB NC_000922.1 906724 908697 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(906724..908697) Chlamydophila pneumoniae CWL029 894666 NP_224997.1 CDS trpS NC_000922.1 908706 909740 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(908706..909740) Chlamydophila pneumoniae CWL029 895541 NP_224998.1 CDS CPn0803 NC_000922.1 909749 910303 R hypothetical protein complement(909749..910303) Chlamydophila pneumoniae CWL029 894751 NP_224999.1 CDS gp6D NC_000922.1 910307 911059 R hypothetical protein complement(910307..911059) Chlamydophila pneumoniae CWL029 894767 NP_225000.1 CDS minD NC_000922.1 911064 911831 R chromosome partitioning ATPase complement(911064..911831) Chlamydophila pneumoniae CWL029 894771 NP_225001.1 CDS thrS NC_000922.1 911864 913771 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(911864..913771) Chlamydophila pneumoniae CWL029 894780 NP_225002.1 CDS CPn0807 NC_000922.1 913971 914882 D hypothetical protein 913971..914882 Chlamydophila pneumoniae CWL029 894708 NP_225003.1 CDS CPn0808 NC_000922.1 914953 916287 R hypothetical protein complement(914953..916287) Chlamydophila pneumoniae CWL029 895589 NP_225004.1 CDS CPn0809 NC_000922.1 916304 917785 R hypothetical protein complement(916304..917785) Chlamydophila pneumoniae CWL029 894727 NP_225005.1 CDS CPn0810 NC_000922.1 917822 918184 R hypothetical protein complement(917822..918184) Chlamydophila pneumoniae CWL029 894997 NP_225006.1 CDS lcrH_1 NC_000922.1 918205 918900 R low calcium response protein H complement(918205..918900) Chlamydophila pneumoniae CWL029 894648 NP_225007.1 CDS mutL NC_000922.1 919123 920865 D This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 919123..920865 Chlamydophila pneumoniae CWL029 894840 NP_225008.1 CDS pepP NC_000922.1 920870 921937 D aminopeptidase 920870..921937 Chlamydophila pneumoniae CWL029 894668 NP_225009.1 CDS CPn0814 NC_000922.1 922107 923360 D hypothetical protein 922107..923360 Chlamydophila pneumoniae CWL029 894654 NP_225010.1 CDS gspD NC_000922.1 923361 925625 D general secretion protein D 923361..925625 Chlamydophila pneumoniae CWL029 895204 NP_225011.1 CDS gspE NC_000922.1 925615 927105 D genral secretion protein E 925615..927105 Chlamydophila pneumoniae CWL029 894688 NP_225012.1 CDS gspF NC_000922.1 927115 928290 D general secretion protein F 927115..928290 Chlamydophila pneumoniae CWL029 895072 NP_225013.1 CDS CPn0818 NC_000922.1 928314 928685 D leader peptide; hypothetical protein 928314..928685 Chlamydophila pneumoniae CWL029 894696 NP_225014.1 CDS CPn0819 NC_000922.1 928689 929135 D hypothetical protein 928689..929135 Chlamydophila pneumoniae CWL029 895187 NP_225015.1 CDS CPn0820 NC_000922.1 929120 929662 D hypothetical protein 929120..929662 Chlamydophila pneumoniae CWL029 894697 NP_225016.1 CDS CPn0821 NC_000922.1 929667 930671 D hypothetical protein 929667..930671 Chlamydophila pneumoniae CWL029 895164 NP_225017.1 CDS CPn0822 NC_000922.1 930756 931232 D hypothetical protein 930756..931232 Chlamydophila pneumoniae CWL029 894656 NP_225018.1 CDS yscT NC_000922.1 931498 932367 R Yop proteins translocation protein T complement(931498..932367) Chlamydophila pneumoniae CWL029 895522 NP_225019.1 CDS yscS NC_000922.1 932375 932662 R Yop proteins translocation protein S complement(932375..932662) Chlamydophila pneumoniae CWL029 894725 NP_225020.1 CDS yscR NC_000922.1 932674 933594 R type III secretion system protein complement(932674..933594) Chlamydophila pneumoniae CWL029 895516 NP_225021.1 CDS yscL NC_000922.1 933609 934310 R type III secretion system protein complement(933609..934310) Chlamydophila pneumoniae CWL029 894673 NP_225022.1 CDS CPn0827 NC_000922.1 934431 935264 R hypothetical protein complement(934431..935264) Chlamydophila pneumoniae CWL029 894669 NP_225023.1 CDS yscJ NC_000922.1 935264 936271 R Yop proteins translocation lipoprotein J complement(935264..936271) Chlamydophila pneumoniae CWL029 894661 NP_225024.1 CDS CPn0829 NC_000922.1 936744 937301 D hypothetical protein 936744..937301 Chlamydophila pneumoniae CWL029 894659 NP_225025.1 CDS CPn0830 NC_000922.1 937444 937962 D hypothetical protein 937444..937962 Chlamydophila pneumoniae CWL029 894657 NP_225026.1 CDS CPn0831 NC_000922.1 938267 938437 D hypothetical protein 938267..938437 Chlamydophila pneumoniae CWL029 895165 NP_225027.1 CDS lipA NC_000922.1 938824 939747 R catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase complement(938824..939747) Chlamydophila pneumoniae CWL029 894731 NP_225028.1 CDS lpdA NC_000922.1 939744 941129 R E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase complement(939744..941129) Chlamydophila pneumoniae CWL029 895532 NP_225029.1 CDS CPn0834 NC_000922.1 941553 942017 D hypothetical protein 941553..942017 Chlamydophila pneumoniae CWL029 894662 NP_225030.1 CDS CPn0835 NC_000922.1 942042 945689 R SWI/SNF family helicase complement(942042..945689) Chlamydophila pneumoniae CWL029 894664 NP_225031.1 CDS brnQ NC_000922.1 945719 946879 R branched-chain amino acid ABC transporter complement(945719..946879) Chlamydophila pneumoniae CWL029 894642 NP_225032.1 CDS nth NC_000922.1 947142 947771 R endonuclease III complement(947142..947771) Chlamydophila pneumoniae CWL029 895073 NP_225033.1 CDS trmE NC_000922.1 947778 949106 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(947778..949106) Chlamydophila pneumoniae CWL029 894670 NP_225034.1 CDS psdD NC_000922.1 949257 950162 D catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 949257..950162 Chlamydophila pneumoniae CWL029 894675 NP_225035.1 CDS CPn0840 NC_000922.1 950222 951547 D hypothetical protein 950222..951547 Chlamydophila pneumoniae CWL029 894732 NP_225036.1 CDS secA NC_000922.1 951731 954643 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 951731..954643 Chlamydophila pneumoniae CWL029 894803 YP_008470950.1 CDS CPn0843 NC_000922.1 954991 955191 R hypothetical protein complement(954991..955191) Chlamydophila pneumoniae CWL029 894634 NP_225039.1 CDS engA NC_000922.1 955267 956730 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(955267..956730) Chlamydophila pneumoniae CWL029 894852 NP_225040.1 CDS pcnB_1 NC_000922.1 956847 958079 R poly A polymerase complement(956847..958079) Chlamydophila pneumoniae CWL029 894681 NP_225041.1 CDS clpX NC_000922.1 958109 959374 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(958109..959374) Chlamydophila pneumoniae CWL029 894687 NP_225042.1 CDS clpP NC_000922.1 959384 959995 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(959384..959995) Chlamydophila pneumoniae CWL029 895088 NP_225043.1 CDS tig NC_000922.1 960174 961502 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(960174..961502) Chlamydophila pneumoniae CWL029 894678 NP_225044.1 CDS CPn0849 NC_000922.1 961788 965288 D SWI/SNF family helicase 961788..965288 Chlamydophila pneumoniae CWL029 895090 NP_225045.1 CDS mreB NC_000922.1 965293 966393 D rod shape-determining protein MreB 965293..966393 Chlamydophila pneumoniae CWL029 894655 NP_225046.1 CDS pckA NC_000922.1 966396 968198 D catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 966396..968198 Chlamydophila pneumoniae CWL029 895150 NP_225047.1 CDS CPn0852 NC_000922.1 968316 970616 D hypothetical protein 968316..970616 Chlamydophila pneumoniae CWL029 894644 NP_225048.1 CDS CPn0853 NC_000922.1 970637 971806 D hypothetical protein 970637..971806 Chlamydophila pneumoniae CWL029 895061 NP_225049.1 CDS porB NC_000922.1 971803 972837 R hypothetical protein complement(971803..972837) Chlamydophila pneumoniae CWL029 894651 NP_225050.1 CDS gpsA NC_000922.1 972991 973995 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(972991..973995) Chlamydophila pneumoniae CWL029 895211 NP_225051.1 CDS CPn0856 NC_000922.1 973992 975377 R UDP-glucose pyrophosphorylase complement(973992..975377) Chlamydophila pneumoniae CWL029 894637 NP_225052.1 CDS CPn0857 NC_000922.1 975389 975757 R hypothetical protein complement(975389..975757) Chlamydophila pneumoniae CWL029 894705 NP_225053.1 CDS fliI NC_000922.1 975754 977055 R involved in type III protein export; type III secretion system ATPase complement(975754..977055) Chlamydophila pneumoniae CWL029 894747 NP_225054.1 CDS CPn0859 NC_000922.1 977052 977588 R hypothetical protein complement(977052..977588) Chlamydophila pneumoniae CWL029 895227 NP_225055.1 CDS fliF NC_000922.1 977605 978630 R type III secretion system protein complement(977605..978630) Chlamydophila pneumoniae CWL029 895650 NP_225056.1 CDS CPn0861 NC_000922.1 978922 979722 R NifU-like protein complement(978922..979722) Chlamydophila pneumoniae CWL029 895261 NP_225057.1 CDS yfhO_2 NC_000922.1 979719 980873 R NifS-like aminotransferase complement(979719..980873) Chlamydophila pneumoniae CWL029 895648 NP_225058.1 CDS pgmA NC_000922.1 980828 981514 R catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase complement(980828..981514) Chlamydophila pneumoniae CWL029 895583 NP_225059.1 CDS yjbC NC_000922.1 981670 982377 D pseudouridine synthase 981670..982377 Chlamydophila pneumoniae CWL029 895585 NP_225060.1 CDS CPn0865 NC_000922.1 982418 982945 D hypothetical protein 982418..982945 Chlamydophila pneumoniae CWL029 895530 NP_225061.1 CDS birA NC_000922.1 982913 983491 R catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase complement(982913..983491) Chlamydophila pneumoniae CWL029 895513 NP_225062.1 CDS rodA NC_000922.1 983423 984670 D rod shape protein 983423..984670 Chlamydophila pneumoniae CWL029 895458 NP_225063.1 CDS zntA NC_000922.1 984667 986643 R metal transport P-type ATPase complement(984667..986643) Chlamydophila pneumoniae CWL029 895693 NP_225064.1 CDS CPn0869 NC_000922.1 986655 987401 R hypothetical protein complement(986655..987401) Chlamydophila pneumoniae CWL029 895430 NP_225065.1 CDS serS NC_000922.1 987445 988728 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(987445..988728) Chlamydophila pneumoniae CWL029 895685 NP_225066.1 CDS ribD NC_000922.1 988772 989902 D riboflavin deaminase 988772..989902 Chlamydophila pneumoniae CWL029 895231 NP_225067.1 CDS ribA/ribB NC_000922.1 989963 991219 D bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 989963..991219 Chlamydophila pneumoniae CWL029 895694 NP_225068.1 CDS ribH NC_000922.1 991233 991697 D RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 991233..991697 Chlamydophila pneumoniae CWL029 895431 NP_225069.1 CDS CPn0874 NC_000922.1 991746 993107 R hypothetical protein complement(991746..993107) Chlamydophila pneumoniae CWL029 895682 NP_225070.1 CDS CPn0875 NC_000922.1 993372 994025 D hypothetical protein 993372..994025 Chlamydophila pneumoniae CWL029 895437 NP_225071.1 CDS dagA_2 NC_000922.1 994144 995520 D D-alanine/glycine permease 994144..995520 Chlamydophila pneumoniae CWL029 895687 NP_225072.1 CDS ybcL NC_000922.1 995533 995985 D hypothetical protein 995533..995985 Chlamydophila pneumoniae CWL029 895449 NP_225073.1 CDS CPn0878 NC_000922.1 995989 996654 R SET domain-containing protein complement(995989..996654) Chlamydophila pneumoniae CWL029 895689 NP_225074.1 CDS yycJ NC_000922.1 996642 997439 R metal dependent hydrolase complement(996642..997439) Chlamydophila pneumoniae CWL029 895253 NP_225075.1 CDS ftsK NC_000922.1 997441 999861 R DNA translocase FtsK complement(997441..999861) Chlamydophila pneumoniae CWL029 895252 NP_225076.1 CDS CPn0881 NC_000922.1 1005667 1006212 D hypothetical protein 1005667..1006212 Chlamydophila pneumoniae CWL029 895686 NP_225077.1 CDS CPn0882 NC_000922.1 1006268 1007407 D hypothetical protein 1006268..1007407 Chlamydophila pneumoniae CWL029 895372 NP_225078.1 CDS nqr6 NC_000922.1 1007570 1008865 R uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F complement(1007570..1008865) Chlamydophila pneumoniae CWL029 895388 NP_225079.1 CDS yajC NC_000922.1 1009006 1009359 R member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC complement(1009006..1009359) Chlamydophila pneumoniae CWL029 895683 NP_225080.1 CDS ygcA NC_000922.1 1009430 1010635 R rRNA methyltransferse complement(1009430..1010635) Chlamydophila pneumoniae CWL029 895438 NP_225081.1 CDS hctA NC_000922.1 1010905 1011276 R histone-like developmental protein complement(1010905..1011276) Chlamydophila pneumoniae CWL029 895684 NP_225082.1 CDS CPn0887 NC_000922.1 1011692 1014160 D hypothetical protein 1011692..1014160 Chlamydophila pneumoniae CWL029 895363 NP_225083.1 CDS hemG NC_000922.1 1014116 1015423 R catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX; protoporphyrinogen oxidase complement(1014116..1015423) Chlamydophila pneumoniae CWL029 895679 NP_225084.1 CDS hemN_2 NC_000922.1 1015459 1016835 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(1015459..1016835) Chlamydophila pneumoniae CWL029 895373 NP_225085.1 CDS hemE NC_000922.1 1016816 1017805 R catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase complement(1016816..1017805) Chlamydophila pneumoniae CWL029 895681 NP_225086.1 CDS mfd NC_000922.1 1017816 1021073 R transcription-repair coupling factor complement(1017816..1021073) Chlamydophila pneumoniae CWL029 895374 NP_225087.1 CDS alaS NC_000922.1 1021043 1023661 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(1021043..1023661) Chlamydophila pneumoniae CWL029 895680 NP_225088.1 CDS tktB_1 NC_000922.1 1023894 1025891 D catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 1023894..1025891 Chlamydophila pneumoniae CWL029 895320 NP_225089.1 CDS amn NC_000922.1 1025885 1026766 R Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase complement(1025885..1026766) Chlamydophila pneumoniae CWL029 895675 NP_225090.1 CDS efp_2 NC_000922.1 1026988 1027560 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 1026988..1027560 Chlamydophila pneumoniae CWL029 895345 NP_225091.1 CDS CPn0896 NC_000922.1 1027595 1027825 D hypothetical protein 1027595..1027825 Chlamydophila pneumoniae CWL029 895678 NP_225092.1 CDS CPn0897 NC_000922.1 1027850 1028737 R phosphohydrolase complement(1027850..1028737) Chlamydophila pneumoniae CWL029 895375 NP_225093.1 CDS groEL_3 NC_000922.1 1028901 1030460 R heat shock protein-60 complement(1028901..1030460) Chlamydophila pneumoniae CWL029 895677 NP_225094.1 CDS murF NC_000922.1 1030875 1032218 D muramoyl-DAP ligase 1030875..1032218 Chlamydophila pneumoniae CWL029 895676 NP_225095.1 CDS mraY NC_000922.1 1032235 1033284 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1032235..1033284 Chlamydophila pneumoniae CWL029 895314 NP_225096.1 CDS murD NC_000922.1 1033287 1034540 D UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 1033287..1034540 Chlamydophila pneumoniae CWL029 895674 NP_225097.1 CDS nlpD NC_000922.1 1034543 1035244 D muramidase 1034543..1035244 Chlamydophila pneumoniae CWL029 895323 NP_225098.1 CDS ftsW NC_000922.1 1035263 1036420 D cell division protein FtsW 1035263..1036420 Chlamydophila pneumoniae CWL029 895302 NP_225099.1 CDS murG NC_000922.1 1036326 1037399 D UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDP diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1036326..1037399 Chlamydophila pneumoniae CWL029 895672 NP_225100.1 CDS murC/ddlA NC_000922.1 1037409 1039838 D catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine and catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase 1037409..1039838 Chlamydophila pneumoniae CWL029 895305 NP_225101.1 CDS CPn0906 NC_000922.1 1039912 1040340 R hypothetical protein complement(1039912..1040340) Chlamydophila pneumoniae CWL029 895673 NP_225102.1 CDS cutA NC_000922.1 1040442 1040780 R divalent cation tolerance protein complement(1040442..1040780) Chlamydophila pneumoniae CWL029 895340 NP_225103.1 CDS CPn0908 NC_000922.1 1040777 1041589 R hypothetical protein complement(1040777..1041589) Chlamydophila pneumoniae CWL029 895671 NP_225104.1 CDS rsbV_2 NC_000922.1 1041637 1041969 D sigma regulatory factor 1041637..1041969 Chlamydophila pneumoniae CWL029 895293 NP_225105.1 CDS miaA NC_000922.1 1041979 1043007 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 1041979..1043007 Chlamydophila pneumoniae CWL029 895662 NP_225106.1 CDS CPn0911 NC_000922.1 1042982 1044043 R hypothetical protein complement(1042982..1044043) Chlamydophila pneumoniae CWL029 895328 NP_225107.1 CDS CPn0912 NC_000922.1 1044129 1045763 D hypothetical protein 1044129..1045763 Chlamydophila pneumoniae CWL029 895666 NP_225108.1 CDS CPn0913 NC_000922.1 1045760 1045948 D hypothetical protein 1045760..1045948 Chlamydophila pneumoniae CWL029 895270 NP_225109.1 CDS CPn0914 NC_000922.1 1045999 1046400 D hypothetical protein 1045999..1046400 Chlamydophila pneumoniae CWL029 895669 NP_225110.1 CDS ybeB NC_000922.1 1046461 1046820 D iojap superfamily protein 1046461..1046820 Chlamydophila pneumoniae CWL029 895223 NP_225111.1 CDS fabF NC_000922.1 1046837 1048087 D FabF, beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-ACP synthase 1046837..1048087 Chlamydophila pneumoniae CWL029 895670 NP_225112.1 CDS CPn0917 NC_000922.1 1048090 1048542 D hydrolase/phosphatase-like protein 1048090..1048542 Chlamydophila pneumoniae CWL029 895341 NP_225113.1 CDS ppa NC_000922.1 1048576 1049223 R catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase complement(1048576..1049223) Chlamydophila pneumoniae CWL029 895310 NP_225114.1 CDS ldh NC_000922.1 1049378 1050433 D leucine dehydrogenase 1049378..1050433 Chlamydophila pneumoniae CWL029 895663 NP_225115.1 CDS cysQ NC_000922.1 1050428 1051405 R sulfite synthesis/biphosphate phosphatase complement(1050428..1051405) Chlamydophila pneumoniae CWL029 895315 NP_225116.1 CDS CPn0921 NC_000922.1 1051535 1052296 D snglycerol-3-P acyltransferase 1051535..1052296 Chlamydophila pneumoniae CWL029 895394 NP_225117.1 CDS aas NC_000922.1 1052314 1053930 D Synthesizes thioester adducts of fatty acids enzymatically to the phosphopantetheine group of acyl carrier protein; long chain fatty acid--[acyl-carrier-protein] ligase 1052314..1053930 Chlamydophila pneumoniae CWL029 895665 NP_225118.1 CDS bioF_1 NC_000922.1 1053984 1055096 D catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 1053984..1055096 Chlamydophila pneumoniae CWL029 895329 NP_225119.1 CDS priA NC_000922.1 1055025 1057274 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(1055025..1057274) Chlamydophila pneumoniae CWL029 895667 NP_225120.1 CDS CPn0925 NC_000922.1 1057223 1057900 R hypothetical protein complement(1057223..1057900) Chlamydophila pneumoniae CWL029 895274 NP_225121.1 CDS CPn0926 NC_000922.1 1058060 1058560 D thioredoxin 1058060..1058560 Chlamydophila pneumoniae CWL029 895661 NP_225122.1 CDS CPn0927 NC_000922.1 1058667 1059809 R hypothetical protein complement(1058667..1059809) Chlamydophila pneumoniae CWL029 895601 NP_225123.1 CDS CPn0928 NC_000922.1 1059881 1061008 R hypothetical protein complement(1059881..1061008) Chlamydophila pneumoniae CWL029 895267 NP_225124.1 CDS CPn0929 NC_000922.1 1061183 1062292 R hypothetical protein complement(1061183..1062292) Chlamydophila pneumoniae CWL029 895659 NP_225125.1 CDS CPn0930 NC_000922.1 1062857 1063333 D hypothetical protein 1062857..1063333 Chlamydophila pneumoniae CWL029 895294 NP_225126.1 CDS lysS NC_000922.1 1064138 1065721 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 1064138..1065721 Chlamydophila pneumoniae CWL029 895660 NP_225127.1 CDS cysS NC_000922.1 1065718 1067142 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(1065718..1067142) Chlamydophila pneumoniae CWL029 895249 NP_225128.1 CDS CPn0933 NC_000922.1 1067535 1068581 D disulfide bond isomerase 1067535..1068581 Chlamydophila pneumoniae CWL029 895657 NP_225129.1 CDS rnpA NC_000922.1 1068523 1068942 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(1068523..1068942) Chlamydophila pneumoniae CWL029 895256 NP_225130.1 CDS rpmH NC_000922.1 1068954 1069091 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(1068954..1069091) Chlamydophila pneumoniae CWL029 895658 NP_225131.1 CDS rpmJ NC_000922.1 1069336 1069473 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 1069336..1069473 Chlamydophila pneumoniae CWL029 895250 NP_225132.1 CDS rpsN NC_000922.1 1069496 1069801 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 1069496..1069801 Chlamydophila pneumoniae CWL029 895492 NP_225133.1 CDS CPn0938 NC_000922.1 1069846 1070322 R leader peptide-periplasmic; hypothetical protein complement(1069846..1070322) Chlamydophila pneumoniae CWL029 895656 NP_225134.1 CDS CPn0939 NC_000922.1 1070728 1071198 D hypothetical protein 1070728..1071198 Chlamydophila pneumoniae CWL029 895550 NP_225135.1 CDS uvrC NC_000922.1 1071201 1073012 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(1071201..1073012) Chlamydophila pneumoniae CWL029 895526 NP_225136.1 CDS mutS NC_000922.1 1073015 1075501 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(1073015..1075501) Chlamydophila pneumoniae CWL029 895642 NP_225137.1 CDS dnaG NC_000922.1 1075985 1077757 D synthesizes RNA primers at the replication forks; DNA primase 1075985..1077757 Chlamydophila pneumoniae CWL029 894685 NP_225138.1 CDS CPn0943 NC_000922.1 1077978 1078241 D hypothetical protein 1077978..1078241 Chlamydophila pneumoniae CWL029 895136 NP_225139.1 CDS CPn0944 NC_000922.1 1078512 1079000 D hypothetical protein 1078512..1079000 Chlamydophila pneumoniae CWL029 895588 NP_225140.1 CDS CPn0945 NC_000922.1 1079070 1079663 D hypothetical protein 1079070..1079663 Chlamydophila pneumoniae CWL029 895597 NP_225141.1 CDS glyQ NC_000922.1 1079742 1082786 R glycyl tRNA synthetase complement(1079742..1082786) Chlamydophila pneumoniae CWL029 895630 NP_225142.1 CDS pgsA_2 NC_000922.1 1083442 1084062 D glycerol-3-P phosphatidyltransferase 1083442..1084062 Chlamydophila pneumoniae CWL029 894730 NP_225143.1 CDS glgA NC_000922.1 1084044 1085474 R catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase complement(1084044..1085474) Chlamydophila pneumoniae CWL029 895529 NP_225144.1 CDS ctc NC_000922.1 1085929 1086486 D the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 1085929..1086486 Chlamydophila pneumoniae CWL029 895638 NP_225145.1 CDS pth NC_000922.1 1086488 1087030 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 1086488..1087030 Chlamydophila pneumoniae CWL029 895643 NP_225146.1 CDS rpsF NC_000922.1 1087122 1087460 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 1087122..1087460 Chlamydophila pneumoniae CWL029 895639 NP_225147.1 CDS rpsR NC_000922.1 1087478 1087726 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 1087478..1087726 Chlamydophila pneumoniae CWL029 895637 NP_225148.1 CDS rplI NC_000922.1 1087742 1088251 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 1087742..1088251 Chlamydophila pneumoniae CWL029 895634 NP_225149.1 CDS CPn0956 NC_000922.1 1089560 1090912 D hypothetical protein 1089560..1090912 Chlamydophila pneumoniae CWL029 895635 NP_225150.1 CDS ide NC_000922.1 1090960 1093788 R insulinase/protease III complement(1090960..1093788) Chlamydophila pneumoniae CWL029 895636 NP_225151.1 CDS plsB NC_000922.1 1093790 1094785 R glycerol-3-P acyltransferase complement(1093790..1094785) Chlamydophila pneumoniae CWL029 895640 NP_225152.1 CDS cafE NC_000922.1 1094796 1096343 R axial filament protein complement(1094796..1096343) Chlamydophila pneumoniae CWL029 895623 NP_225153.2 CDS CPn0960 NC_000922.1 1096578 1097105 D hypothetical protein 1096578..1097105 Chlamydophila pneumoniae CWL029 895632 NP_225154.1 CDS rpmF NC_000922.1 1097118 1097300 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1097118..1097300 Chlamydophila pneumoniae CWL029 895629 NP_225155.1 CDS plsX NC_000922.1 1097316 1098278 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1097316..1098278 Chlamydophila pneumoniae CWL029 895631 NP_225156.1 CDS pmp_21 NC_000922.1 1098398 1103227 D outer membrane protein D 1098398..1103227 Chlamydophila pneumoniae CWL029 895625 NP_225157.1 CDS CPn0964 NC_000922.1 1103298 1104758 R hypothetical protein complement(1103298..1104758) Chlamydophila pneumoniae CWL029 895628 NP_225158.1 CDS lpxB NC_000922.1 1104922 1106736 R catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate; lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase complement(1104922..1106736) Chlamydophila pneumoniae CWL029 895627 NP_225159.1 CDS pcnB_2 NC_000922.1 1106745 1108037 R poly A polymerase complement(1106745..1108037) Chlamydophila pneumoniae CWL029 895626 NP_225160.1 CDS glmM NC_000922.1 1108512 1109888 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 1108512..1109888 Chlamydophila pneumoniae CWL029 895620 NP_225161.1 CDS glmS NC_000922.1 1109895 1111724 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 1109895..1111724 Chlamydophila pneumoniae CWL029 895622 NP_225162.1 CDS tyrP_1 NC_000922.1 1111812 1113002 D tyrosine transporter 1111812..1113002 Chlamydophila pneumoniae CWL029 895619 NP_225163.1 CDS yccA_1 NC_000922.1 1113053 1113373 D ABC transporter permease 1113053..1113373 Chlamydophila pneumoniae CWL029 895615 NP_225164.1 CDS tyrP_2 NC_000922.1 1113461 1114651 D tyrosine transporter 1113461..1114651 Chlamydophila pneumoniae CWL029 895618 NP_225165.1 CDS yccA_2 NC_000922.1 1114702 1115418 D ABC transporter permease 1114702..1115418 Chlamydophila pneumoniae CWL029 895621 NP_225166.1 CDS ftsY NC_000922.1 1115427 1116299 R cell division protein FtsY complement(1115427..1116299) Chlamydophila pneumoniae CWL029 895610 NP_225167.1 CDS sucC NC_000922.1 1116370 1117530 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 1116370..1117530 Chlamydophila pneumoniae CWL029 895617 NP_225168.1 CDS sucD NC_000922.1 1117544 1118425 D Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 1117544..1118425 Chlamydophila pneumoniae CWL029 895616 NP_225169.1 CDS CPn0975 NC_000922.1 1119104 1119640 D hypothetical protein 1119104..1119640 Chlamydophila pneumoniae CWL029 895614 NP_225170.1 CDS CPn0976 NC_000922.1 1120082 1121188 D hypothetical protein 1120082..1121188 Chlamydophila pneumoniae CWL029 895613 NP_225171.1 CDS CPn0977 NC_000922.1 1121371 1122405 D hypothetical protein 1121371..1122405 Chlamydophila pneumoniae CWL029 895608 NP_225172.1 CDS CPn0978 NC_000922.1 1122665 1123696 D hypothetical protein 1122665..1123696 Chlamydophila pneumoniae CWL029 895611 NP_225173.1 CDS htrA NC_000922.1 1123980 1125446 D DO Serine protease 1123980..1125446 Chlamydophila pneumoniae CWL029 895609 NP_225174.1 CDS CPn0980 NC_000922.1 1125501 1126982 R hypothetical protein complement(1125501..1126982) Chlamydophila pneumoniae CWL029 895605 NP_225175.1 CDS CPn0981 NC_000922.1 1127031 1129955 D zinc metalloprotease 1127031..1129955 Chlamydophila pneumoniae CWL029 895612 NP_225176.1 CDS yigN NC_000922.1 1129959 1131194 R hypothetical protein complement(1129959..1131194) Chlamydophila pneumoniae CWL029 895604 NP_225177.1 CDS pssA NC_000922.1 1131203 1132000 R glycerol-serine phosphatidyltransferase complement(1131203..1132000) Chlamydophila pneumoniae CWL029 895602 NP_225178.1 CDS nrdA NC_000922.1 1132379 1135513 D catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1132379..1135513 Chlamydophila pneumoniae CWL029 895606 NP_225179.1 CDS nrdB NC_000922.1 1135534 1136574 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 1135534..1136574 Chlamydophila pneumoniae CWL029 895607 NP_225180.1 CDS trmB NC_000922.1 1136724 1137398 D tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 1136724..1137398 Chlamydophila pneumoniae CWL029 895603 NP_225181.1 CDS ytgB_2 NC_000922.1 1137516 1138118 D YtgB-like rRNA methylase 1137516..1138118 Chlamydophila pneumoniae CWL029 895518 NP_225182.1 CDS murB NC_000922.1 1138072 1138986 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(1138072..1138986) Chlamydophila pneumoniae CWL029 895599 NP_225183.1 CDS nusB NC_000922.1 1139013 1139495 R Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB complement(1139013..1139495) Chlamydophila pneumoniae CWL029 895514 NP_225184.1 CDS infC NC_000922.1 1139883 1140443 D IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 1139883..1140443 Chlamydophila pneumoniae CWL029 895598 NP_225185.1 CDS rpmI NC_000922.1 1140421 1140615 D 50S ribosomal protein L35 1140421..1140615 Chlamydophila pneumoniae CWL029 895584 NP_225186.1 CDS rplT NC_000922.1 1140634 1140999 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1140634..1140999 Chlamydophila pneumoniae CWL029 895510 NP_225187.1 CDS pheS NC_000922.1 1141014 1142033 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1141014..1142033 Chlamydophila pneumoniae CWL029 895511 NP_225188.1 CDS CPn0994 NC_000922.1 1142398 1144443 D hypothetical protein 1142398..1144443 Chlamydophila pneumoniae CWL029 895507 NP_225189.1 CDS CPn0995 NC_000922.1 1144412 1145512 R hypothetical protein complement(1144412..1145512) Chlamydophila pneumoniae CWL029 895496 NP_225190.1 CDS CPn0996 NC_000922.1 1145516 1146589 R hypothetical protein complement(1145516..1146589) Chlamydophila pneumoniae CWL029 894650 NP_225191.1 CDS mesJ NC_000922.1 1146708 1147667 D PP-loop superfamily ATPase 1146708..1147667 Chlamydophila pneumoniae CWL029 894796 NP_225192.1 CDS ftsH NC_000922.1 1147855 1150587 D ATP-dependent zinc protease 1147855..1150587 Chlamydophila pneumoniae CWL029 894677 NP_225193.1 CDS pnp NC_000922.1 1150763 1152847 R polynucleotide phosphorylase complement(1150763..1152847) Chlamydophila pneumoniae CWL029 894682 NP_225194.1 CDS rpsO NC_000922.1 1152888 1153157 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(1152888..1153157) Chlamydophila pneumoniae CWL029 894686 NP_225195.1 CDS yfhC NC_000922.1 1153405 1153872 D cytosine deaminase 1153405..1153872 Chlamydophila pneumoniae CWL029 895125 NP_225196.1 CDS CPn1002 NC_000922.1 1153862 1154092 D hypothetical protein 1153862..1154092 Chlamydophila pneumoniae CWL029 894698 NP_225197.1 CDS CPn1003 NC_000922.1 1154089 1154796 R hypothetical protein complement(1154089..1154796) Chlamydophila pneumoniae CWL029 895113 NP_225198.1 CDS CPn1004 NC_000922.1 1154876 1155397 R hypothetical protein complement(1154876..1155397) Chlamydophila pneumoniae CWL029 894741 NP_225199.1 CDS CPn1005 NC_000922.1 1155412 1155933 R hypothetical protein complement(1155412..1155933) Chlamydophila pneumoniae CWL029 894635 NP_225200.1 CDS CPn1006 NC_000922.1 1155987 1156472 R hypothetical protein complement(1155987..1156472) Chlamydophila pneumoniae CWL029 894777 NP_225201.1 CDS CPn1007 NC_000922.1 1156689 1156910 D hypothetical protein 1156689..1156910 Chlamydophila pneumoniae CWL029 894680 NP_225202.1 CDS CPn1008 NC_000922.1 1156928 1158226 D hypothetical protein 1156928..1158226 Chlamydophila pneumoniae CWL029 895502 NP_225203.1 CDS map NC_000922.1 1158183 1159058 R catalyzes the removal of N-terminal amino acids from peptides and arylamides; methionine aminopeptidase complement(1158183..1159058) Chlamydophila pneumoniae CWL029 894643 NP_225204.1 CDS CPn1010 NC_000922.1 1159064 1159672 R hypothetical protein complement(1159064..1159672) Chlamydophila pneumoniae CWL029 895067 NP_225206.1 CDS yzeB NC_000922.1 1160418 1162193 R ABC transporter permease complement(1160418..1162193) Chlamydophila pneumoniae CWL029 895096 NP_225207.1 CDS fumC NC_000922.1 1162245 1163627 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 1162245..1163627 Chlamydophila pneumoniae CWL029 894645 NP_225208.1 CDS ychM NC_000922.1 1163729 1165426 R sulfate transporter complement(1163729..1165426) Chlamydophila pneumoniae CWL029 895048 NP_225209.1 CDS CPn1015 NC_000922.1 1165634 1166896 D possible IM protein; hypothetical protein 1165634..1166896 Chlamydophila pneumoniae CWL029 894636 NP_225210.1 CDS CPn1016 NC_000922.1 1167042 1168901 D hypothetical protein 1167042..1168901 Chlamydophila pneumoniae CWL029 894984 NP_225211.1 CDS ispH NC_000922.1 1169006 1169938 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1169006..1169938 Chlamydophila pneumoniae CWL029 895489 NP_225212.1 CDS CPn1018 NC_000922.1 1169898 1170632 D hypothetical protein 1169898..1170632 Chlamydophila pneumoniae CWL029 895652 NP_225213.1 CDS CPn1019 NC_000922.1 1170635 1172128 R hypothetical protein complement(1170635..1172128) Chlamydophila pneumoniae CWL029 894646 NP_225214.1 CDS CPn1020 NC_000922.1 1172147 1173679 R hypothetical protein complement(1172147..1173679) Chlamydophila pneumoniae CWL029 894999 NP_225215.1 CDS lcrH_2 NC_000922.1 1173695 1174213 R low calcium response protein H complement(1173695..1174213) Chlamydophila pneumoniae CWL029 894782 NP_225216.1 CDS CPn1022 NC_000922.1 1174213 1175673 R hypothetical protein complement(1174213..1175673) Chlamydophila pneumoniae CWL029 895477 NP_225217.1 CDS CPn1023 NC_000922.1 1176035 1176334 D hypothetical protein 1176035..1176334 Chlamydophila pneumoniae CWL029 894707 NP_225218.1 CDS xerD NC_000922.1 1176331 1177236 R site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD complement(1176331..1177236) Chlamydophila pneumoniae CWL029 895217 NP_225219.1 CDS pgi NC_000922.1 1177302 1178882 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 1177302..1178882 Chlamydophila pneumoniae CWL029 895490 NP_225220.1 CDS CPn1026 NC_000922.1 1178997 1179140 D late transcription unit A protein 1178997..1179140 Chlamydophila pneumoniae CWL029 895653 NP_225221.1 CDS CPn1027 NC_000922.1 1179175 1180758 D hypothetical protein 1179175..1180758 Chlamydophila pneumoniae CWL029 894715 NP_225222.1 CDS mdhC NC_000922.1 1181016 1182002 D catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase 1181016..1182002 Chlamydophila pneumoniae CWL029 894763 NP_225223.1 CDS CPn1029 NC_000922.1 1182008 1182847 D hypothetical protein 1182008..1182847 Chlamydophila pneumoniae CWL029 894720 NP_225224.1 CDS CPn1030 NC_000922.1 1182840 1183886 R D-amino acid dehyrogenase complement(1182840..1183886) Chlamydophila pneumoniae CWL029 894761 NP_225225.1 CDS arcD NC_000922.1 1184095 1185552 R arginine/ornithine antiporter complement(1184095..1185552) Chlamydophila pneumoniae CWL029 894716 NP_225226.1 CDS CPn1032 NC_000922.1 1185563 1186150 R hypothetical protein complement(1185563..1186150) Chlamydophila pneumoniae CWL029 895497 NP_225227.1 CDS CPn1033 NC_000922.1 1186184 1187500 R hypothetical protein complement(1186184..1187500) Chlamydophila pneumoniae CWL029 895500 NP_225228.1 CDS CPn1034 NC_000922.1 1187729 1188517 R hypothetical protein complement(1187729..1188517) Chlamydophila pneumoniae CWL029 894766 NP_225229.1 CDS aroDE NC_000922.1 1188567 1190000 R AroDE; bifunctional enzyme; can convert 3-dehydroquinate to 3-dehydroshkimate and then to shikimate; involved in the synthesis of aromatic amino acids and other metabolites; type I 3-DHQase; bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase complement(1188567..1190000) Chlamydophila pneumoniae CWL029 894704 NP_225230.1 CDS aroB NC_000922.1 1189981 1191135 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(1189981..1191135) Chlamydophila pneumoniae CWL029 894866 NP_225231.1 CDS aroC NC_000922.1 1191120 1192199 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(1191120..1192199) Chlamydophila pneumoniae CWL029 894701 NP_225232.1 CDS aroL NC_000922.1 1192196 1192726 R catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase complement(1192196..1192726) Chlamydophila pneumoniae CWL029 895565 NP_225233.1 CDS aroA NC_000922.1 1192662 1193999 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(1192662..1193999) Chlamydophila pneumoniae CWL029 894689 NP_225234.1 CDS CPn1040 NC_000922.1 1194070 1194741 R hypothetical protein complement(1194070..1194741) Chlamydophila pneumoniae CWL029 895064 NP_225235.1 CDS bioA NC_000922.1 1194723 1195994 R adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(1194723..1195994) Chlamydophila pneumoniae CWL029 894723 NP_225236.1 CDS bioD NC_000922.1 1195931 1196590 R dethiobiotin synthetase complement(1195931..1196590) Chlamydophila pneumoniae CWL029 895031 NP_225237.1 CDS bioF_2 NC_000922.1 1196569 1197717 R oxononanoate synthase complement(1196569..1197717) Chlamydophila pneumoniae CWL029 895478 NP_225238.1 CDS bioB NC_000922.1 1197696 1198691 R biotin synthase complement(1197696..1198691) Chlamydophila pneumoniae CWL029 895651 NP_225239.1 CDS CPn1045 NC_000922.1 1198898 1199590 R hypothetical protein complement(1198898..1199590) Chlamydophila pneumoniae CWL029 894717 NP_225240.1 CDS phhA NC_000922.1 1199587 1200675 R catalyzes the formation of tyrosine, dihydroxyphenylalanine, and 5-hydroxytryptophan from phenylalanine, tyrosine, and tryptophan respectively; aromatic amino acid hydroxylase complement(1199587..1200675) Chlamydophila pneumoniae CWL029 894768 NP_225241.1 CDS dapB NC_000922.1 1200552 1201346 D catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 1200552..1201346 Chlamydophila pneumoniae CWL029 894756 NP_225242.1 CDS asd NC_000922.1 1201606 1202607 D catalyzes the formation of aspartate semialdehyde from aspartyl phosphate; aspartate-semialdehyde dehydrogenase 1201606..1202607 Chlamydophila pneumoniae CWL029 894684 NP_225243.1 CDS lysC NC_000922.1 1202595 1203917 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; aspartate kinase 1202595..1203917 Chlamydophila pneumoniae CWL029 895115 NP_225244.1 CDS dapA NC_000922.1 1203926 1204801 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1203926..1204801 Chlamydophila pneumoniae CWL029 894676 NP_225245.1 CDS CPn1051 NC_000922.1 1204962 1205273 D hypothetical protein 1204962..1205273 Chlamydophila pneumoniae CWL029 895366 NP_225246.1 CDS CPn1052 NC_000922.1 1205417 1206172 D hypothetical protein 1205417..1206172 Chlamydophila pneumoniae CWL029 895647 NP_225247.1 CDS CPn1053 NC_000922.1 1206153 1206704 D hypothetical protein 1206153..1206704 Chlamydophila pneumoniae CWL029 895303 NP_225248.1 CDS CPn1054 NC_000922.1 1207034 1209469 D hypothetical protein 1207034..1209469 Chlamydophila pneumoniae CWL029 895649 NP_225249.1 CDS CPn1055 NC_000922.1 1209694 1210524 D hypothetical protein 1209694..1210524 Chlamydophila pneumoniae CWL029 894674 NP_225250.1 CDS CPn1056 NC_000922.1 1210527 1211231 D hypothetical protein 1210527..1211231 Chlamydophila pneumoniae CWL029 894711 NP_225251.1 CDS CPn1057 NC_000922.1 1211497 1213599 D hypothetical protein 1211497..1213599 Chlamydophila pneumoniae CWL029 895586 NP_225252.1 CDS CPn1058 NC_000922.1 1213748 1214839 D hypothetical protein 1213748..1214839 Chlamydophila pneumoniae CWL029 894709 NP_225253.1 CDS ksgA NC_000922.1 1214848 1215681 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1214848..1215681 Chlamydophila pneumoniae CWL029 895577 NP_225254.1 CDS tktB_2 NC_000922.1 1215724 1217658 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(1215724..1217658) Chlamydophila pneumoniae CWL029 894783 NP_225255.1 CDS CPn1061 NC_000922.1 1217663 1217920 R hypothetical protein complement(1217663..1217920) Chlamydophila pneumoniae CWL029 894867 YP_008470951.1 CDS CPn1060a NC_000922.1 1217925 1218152 R exodeoxyribonuclease VII small subunit complement(1217925..1218152) Chlamydophila pneumoniae CWL029 16665122 NP_225256.1 CDS xseA NC_000922.1 1218156 1219820 R bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit complement(1218156..1219820) Chlamydophila pneumoniae CWL029 894865 NP_225257.1 CDS tpiA NC_000922.1 1219951 1220715 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 1219951..1220715 Chlamydophila pneumoniae CWL029 894778 NP_225258.1 CDS CPn1064 NC_000922.1 1220719 1220898 D hypothetical protein 1220719..1220898 Chlamydophila pneumoniae CWL029 894713 NP_225259.1 CDS CPn1065 NC_000922.1 1220925 1221095 R hypothetical protein complement(1220925..1221095) Chlamydophila pneumoniae CWL029 895216 NP_225260.1 CDS secG NC_000922.1 1221135 1221491 D preprotein translocase subunit SecG 1221135..1221491 Chlamydophila pneumoniae CWL029 894748 NP_225261.1 CDS def NC_000922.1 1221735 1222295 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1221735..1222295 Chlamydophila pneumoniae CWL029 894864 NP_225262.1 CDS rnhB_2 NC_000922.1 1222362 1223258 R An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease HIII complement(1222362..1223258) Chlamydophila pneumoniae CWL029 894683 NP_225263.1 CDS yfgA NC_000922.1 1223513 1223944 D HTH transcriptional regulator 1223513..1223944 Chlamydophila pneumoniae CWL029 894722 NP_225264.1 CDS CPn1070 NC_000922.1 1224141 1225511 R hypothetical protein complement(1224141..1225511) Chlamydophila pneumoniae CWL029 895291 NP_225265.1 CDS CPn1071 NC_000922.1 1225882 1227324 R hypothetical protein complement(1225882..1227324) Chlamydophila pneumoniae CWL029 894728 NP_225266.1 CDS CPn1072 NC_000922.1 1227969 1228838 D hypothetical protein 1227969..1228838 Chlamydophila pneumoniae CWL029 895545 NP_225267.1 CDS CPn1073 NC_000922.1 1229011 1229835 D hypothetical protein 1229011..1229835 Chlamydophila pneumoniae CWL029 894694 CPnt01 tRNA CPnt01 NC_000922.1 87450 87522 R tRNA-Met complement(87450..87522) Chlamydophila pneumoniae CWL029 3283507 CPnt02 tRNA CPnt02 NC_000922.1 89657 89728 D tRNA-Thr 89657..89728 Chlamydophila pneumoniae CWL029 3283508 CPnt03 tRNA CPnt03 NC_000922.1 90998 91070 D tRNA-Trp 90998..91070 Chlamydophila pneumoniae CWL029 3283509 CPnt04 tRNA CPnt04 NC_000922.1 164318 164389 R tRNA-Asn complement(164318..164389) Chlamydophila pneumoniae CWL029 3283511 CPnt05 tRNA CPnt05 NC_000922.1 199229 199301 D tRNA-Met 199229..199301 Chlamydophila pneumoniae CWL029 3283512 CPnt06 tRNA CPnt06 NC_000922.1 199317 199390 D tRNA-Met 199317..199390 Chlamydophila pneumoniae CWL029 3283513 CPnt07 tRNA CPnt07 NC_000922.1 268992 269065 R tRNA-Ile complement(268992..269065) Chlamydophila pneumoniae CWL029 3283514 CPnt08 tRNA CPnt08 NC_000922.1 269070 269142 R tRNA-Ala complement(269070..269142) Chlamydophila pneumoniae CWL029 3283515 CPnt09 tRNA CPnt09 NC_000922.1 293317 293399 R tRNA-Tyr complement(293317..293399) Chlamydophila pneumoniae CWL029 3283516 CPnt10 tRNA CPnt10 NC_000922.1 293405 293477 R tRNA-Thr complement(293405..293477) Chlamydophila pneumoniae CWL029 3283517 CPnt11 tRNA CPnt11 NC_000922.1 296075 296147 D tRNA-Val 296075..296147 Chlamydophila pneumoniae CWL029 3283518 CPnt12 tRNA CPnt12 NC_000922.1 296151 296224 D tRNA-Asp 296151..296224 Chlamydophila pneumoniae CWL029 3283519 CPnt13 tRNA CPnt13 NC_000922.1 409848 409922 D tRNA-Pro 409848..409922 Chlamydophila pneumoniae CWL029 3283524 CPnt14 tRNA CPnt14 NC_000922.1 462141 462214 D tRNA-Arg 462141..462214 Chlamydophila pneumoniae CWL029 3283525 CPnt15 tRNA CPnt15 NC_000922.1 626901 626987 R tRNA-Ser complement(626901..626987) Chlamydophila pneumoniae CWL029 3283541 CPnt16 tRNA CPnt16 NC_000922.1 631373 631445 R tRNA-Phe complement(631373..631445) Chlamydophila pneumoniae CWL029 3283532 CPnt17 tRNA CPnt17 NC_000922.1 672236 672318 D tRNA-Leu 672236..672318 Chlamydophila pneumoniae CWL029 3283533 CPnt18 tRNA CPnt18 NC_000922.1 677264 677337 D tRNA-Arg 677264..677337 Chlamydophila pneumoniae CWL029 3283534 CPnt19 tRNA CPnt19 NC_000922.1 680178 680259 R tRNA-Leu complement(680178..680259) Chlamydophila pneumoniae CWL029 3283535 CPnt20 tRNA CPnt20 NC_000922.1 708354 708441 R tRNA-Ser complement(708354..708441) Chlamydophila pneumoniae CWL029 3283529 CPnt21 tRNA CPnt21 NC_000922.1 715889 715971 R tRNA-Leu complement(715889..715971) Chlamydophila pneumoniae CWL029 3283530 CPnt22 tRNA CPnt22 NC_000922.1 739403 739486 D tRNA-Leu 739403..739486 Chlamydophila pneumoniae CWL029 3283531 CPnt23 tRNA CPnt23 NC_000922.1 781610 781680 D tRNA-Gly 781610..781680 Chlamydophila pneumoniae CWL029 3283520 CPnt24 tRNA CPnt24 NC_000922.1 784822 784896 D tRNA-Glu 784822..784896 Chlamydophila pneumoniae CWL029 3283521 CPnt25 tRNA CPnt25 NC_000922.1 784922 784994 D tRNA-Lys 784922..784994 Chlamydophila pneumoniae CWL029 3283522 CPnt26 tRNA CPnt26 NC_000922.1 786708 786780 R tRNA-Thr complement(786708..786780) Chlamydophila pneumoniae CWL029 3283523 CPnt27 tRNA CPnt27 NC_000922.1 807341 807413 R tRNA-Arg complement(807341..807413) Chlamydophila pneumoniae CWL029 3283544 CPnt28 tRNA CPnt28 NC_000922.1 836119 836191 D tRNA-Ala 836119..836191 Chlamydophila pneumoniae CWL029 3283545 CPnt29 tRNA CPnt29 NC_000922.1 843926 843999 D tRNA-Pro 843926..843999 Chlamydophila pneumoniae CWL029 3283546 CPnt30 tRNA CPnt30 NC_000922.1 877400 877473 D tRNA-Arg 877400..877473 Chlamydophila pneumoniae CWL029 3283547 CPnt31 tRNA CPnt31 NC_000922.1 961536 961607 R tRNA-Gly complement(961536..961607) Chlamydophila pneumoniae CWL029 3283536 CPnt32 tRNA CPnt32 NC_000922.1 999949 1000022 R tRNA-His complement(999949..1000022) Chlamydophila pneumoniae CWL029 3283537 CPnt33 tRNA CPnt33 NC_000922.1 1030533 1030603 R tRNA-Cys complement(1030533..1030603) Chlamydophila pneumoniae CWL029 3283542 CPnt34 tRNA CPnt34 NC_000922.1 1085605 1085676 D tRNA-Gln 1085605..1085676 Chlamydophila pneumoniae CWL029 3283526 CPnt35 tRNA CPnt35 NC_000922.1 1137389 1137462 R tRNA-Val complement(1137389..1137462) Chlamydophila pneumoniae CWL029 3283527 CPnt36 tRNA CPnt36 NC_000922.1 1142034 1142117 D tRNA-Ser 1142034..1142117 Chlamydophila pneumoniae CWL029 3283528 CPnt37 tRNA CPnt37 NC_000922.1 1175863 1175944 D tRNA-Leu 1175863..1175944 Chlamydophila pneumoniae CWL029 3283548 CPnt38 tRNA CPnt38 NC_000922.1 1229945 1230028 R tRNA-Ser complement(1229945..1230028) Chlamydophila pneumoniae CWL029 3283549 CPnr01 rRNA CPnr01 NC_000922.1 1000564 1002115 D 16S ribosomal RNA 1000564..1002115 Chlamydophila pneumoniae CWL029 3283538 CPnr02 rRNA CPnr02 NC_000922.1 1002415 1005278 D 23S ribosomal RNA 1002415..1005278 Chlamydophila pneumoniae CWL029 3283539 CPnr03 rRNA CPnr03 NC_000922.1 1005393 1005509 D 5S ribosomal RNA 1005393..1005509 Chlamydophila pneumoniae CWL029 3283540