-- dump date 20140619_040451 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type NP_300060.1 15835536 918766 complement(1..282) 1 NC_002491.1 hypothetical protein 282 918766 CPj0001 Chlamydophila pneumoniae J138 hypothetical protein NP_300060.1 1 R 138677 CDS NP_300061.1 15835537 918790 573..878 1 NC_002491.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 878 gatC 918790 gatC Chlamydophila pneumoniae J138 aspartyl/glutamyl-tRNA amidotransferase subunit C NP_300061.1 573 D 138677 CDS NP_300062.1 15835538 918791 895..2373 1 NC_002491.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 2373 gatA 918791 gatA Chlamydophila pneumoniae J138 aspartyl/glutamyl-tRNA amidotransferase subunit A NP_300062.1 895 D 138677 CDS NP_300063.1 15835539 918792 2370..3836 1 NC_002491.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 3836 gatB 918792 gatB Chlamydophila pneumoniae J138 aspartyl/glutamyl-tRNA amidotransferase subunit B NP_300063.1 2370 D 138677 CDS NP_300064.1 15835540 918793 4127..6895 1 NC_002491.1 hypothetical protein 6895 pmp_1 918793 pmp_1 Chlamydophila pneumoniae J138 hypothetical protein NP_300064.1 4127 D 138677 CDS NP_300065.1 15835541 918794 complement(7138..7293) 1 NC_002491.1 hypothetical protein 7293 918794 CPj0006 Chlamydophila pneumoniae J138 hypothetical protein NP_300065.1 7138 R 138677 CDS NP_300066.1 15835542 918795 7515..10169 1 NC_002491.1 hypothetical protein 10169 918795 CPj0007 Chlamydophila pneumoniae J138 hypothetical protein NP_300066.1 7515 D 138677 CDS NP_300067.1 15835543 918796 10645..11358 1 NC_002491.1 hypothetical protein 11358 918796 CPj0008 Chlamydophila pneumoniae J138 hypothetical protein NP_300067.1 10645 D 138677 CDS NP_300068.1 15835544 918797 11485..12792 1 NC_002491.1 hypothetical protein 12792 918797 CPj0009 Chlamydophila pneumoniae J138 hypothetical protein NP_300068.1 11485 D 138677 CDS NP_300069.1 15835545 918799 13104..15428 1 NC_002491.1 hypothetical protein 15428 918799 CPj0010 Chlamydophila pneumoniae J138 hypothetical protein NP_300069.1 13104 D 138677 CDS NP_300070.1 15835546 918800 15571..16296 1 NC_002491.1 hypothetical protein 16296 918800 CPj0011 Chlamydophila pneumoniae J138 hypothetical protein NP_300070.1 15571 D 138677 CDS NP_300071.1 15835547 918801 16323..17894 1 NC_002491.1 hypothetical protein 17894 918801 CPj0012 Chlamydophila pneumoniae J138 hypothetical protein NP_300071.1 16323 D 138677 CDS NP_300072.1 15835548 918802 18263..20401 1 NC_002491.1 hypothetical protein 20401 pmp_2_1 918802 pmp_2_1 Chlamydophila pneumoniae J138 hypothetical protein NP_300072.1 18263 D 138677 CDS NP_300073.1 15835549 918803 20332..20787 1 NC_002491.1 frame-shift with pmp2_1; hypothetical protein 20787 pmp_2_2 918803 pmp_2_2 Chlamydophila pneumoniae J138 hypothetical protein NP_300073.1 20332 D 138677 CDS NP_300074.1 15835550 918804 21043..21603 1 NC_002491.1 hypothetical protein 21603 pmp_3_1 918804 pmp_3_1 Chlamydophila pneumoniae J138 hypothetical protein NP_300074.1 21043 D 138677 CDS NP_300075.1 15835551 918805 21537..23855 1 NC_002491.1 frame-shift with pmp3_1; hypothetical protein 23855 pmp_3_2 918805 pmp_3_2 Chlamydophila pneumoniae J138 hypothetical protein NP_300075.1 21537 D 138677 CDS NP_300076.1 15835552 918806 24094..25377 1 NC_002491.1 hypothetical protein 25377 pmp_4_1 918806 pmp_4_1 Chlamydophila pneumoniae J138 hypothetical protein NP_300076.1 24094 D 138677 CDS NP_300077.1 15835553 918807 25374..25862 1 NC_002491.1 frame-shift with pmp_4_1; hypothetical protein 25862 pmp_4_1_2 918807 pmp_4_1_2 Chlamydophila pneumoniae J138 hypothetical protein NP_300077.1 25374 D 138677 CDS NP_300078.1 15835554 918808 25765..26844 1 NC_002491.1 frame-shift with pmp_4_1_2; hypothetical protein 26844 pmp_4_2 918808 pmp_4_2 Chlamydophila pneumoniae J138 hypothetical protein NP_300078.1 25765 D 138677 CDS NP_300079.1 15835555 918809 27193..28677 1 NC_002491.1 hypothetical protein 28677 pmp_5_1 918809 pmp_5_1 Chlamydophila pneumoniae J138 hypothetical protein NP_300079.1 27193 D 138677 CDS NP_300080.1 15835556 918810 28693..30030 1 NC_002491.1 frame-shift with pmp_5_1; hypothetical protein 30030 pmp_5_2 918810 pmp_5_2 Chlamydophila pneumoniae J138 hypothetical protein NP_300080.1 28693 D 138677 CDS NP_300081.1 15835557 918811 complement(30271..32358) 1 NC_002491.1 leader peptide: outer membrane; hypothetical protein 32358 918811 CPj0020 Chlamydophila pneumoniae J138 hypothetical protein NP_300081.1 30271 R 138677 CDS NP_300082.1 15835558 918812 complement(32375..34081) 1 NC_002491.1 leader peptide; hypothetical protein 34081 918812 CPj0021 Chlamydophila pneumoniae J138 hypothetical protein NP_300082.1 32375 R 138677 CDS NP_300083.1 15835559 918813 complement(34063..34653) 1 NC_002491.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 34653 maf 918813 maf Chlamydophila pneumoniae J138 Maf-like protein NP_300083.1 34063 R 138677 CDS NP_300084.1 15835560 918814 complement(34682..36274) 1 NC_002491.1 ABC transporter protein ATPase 36274 yjjK 918814 yjjK Chlamydophila pneumoniae J138 ABC transporter protein ATPase NP_300084.1 34682 R 138677 CDS NP_300085.1 15835561 918815 complement(36329..37267) 1 NC_002491.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 37267 xerC 918815 xerC Chlamydophila pneumoniae J138 site-specific tyrosine recombinase XerC NP_300085.1 36329 R 138677 CDS NP_300086.1 15835562 918816 complement(37352..38275) 1 NC_002491.1 member of metallo-beta-lactamase; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z 38275 atsA 918816 atsA Chlamydophila pneumoniae J138 ribonuclease Z NP_300086.1 37352 R 138677 CDS NP_300087.1 15835563 918817 complement(38430..39296) 1 NC_002491.1 hypothetical protein 39296 918817 CPj0026 Chlamydophila pneumoniae J138 hypothetical protein NP_300087.1 38430 R 138677 CDS NP_300088.1 15835564 918819 complement(39446..41905) 1 NC_002491.1 Lon ATP-dependent protease 41905 lon 918819 lon Chlamydophila pneumoniae J138 Lon ATP-dependent protease NP_300088.1 39446 R 138677 CDS NP_300089.1 15835565 918820 complement(42211..42996) 1 NC_002491.1 hypothetical protein 42996 918820 CPj0028 Chlamydophila pneumoniae J138 hypothetical protein NP_300089.1 42211 R 138677 CDS NP_300090.1 15835566 918821 complement(43058..43426) 1 NC_002491.1 hypothetical protein 43426 918821 CPj0029 Chlamydophila pneumoniae J138 hypothetical protein NP_300090.1 43058 R 138677 CDS NP_300091.1 15835567 918822 43562..44203 1 NC_002491.1 O-sialoglycoprotein endopeptidase 44203 gcp_1 918822 gcp_1 Chlamydophila pneumoniae J138 O-sialoglycoprotein endopeptidase NP_300091.1 43562 D 138677 CDS NP_300092.1 15835568 918823 44382..44558 1 NC_002491.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 44558 rpsU 918823 rpsU Chlamydophila pneumoniae J138 30S ribosomal protein S21 NP_300092.1 44382 D 138677 CDS NP_300093.1 15835569 918824 44594..45772 1 NC_002491.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ 45772 dnaJ 918824 dnaJ Chlamydophila pneumoniae J138 molecular chaperone DnaJ NP_300093.1 44594 D 138677 CDS NP_300094.1 15835570 918825 45809..47845 1 NC_002491.1 (pyruvate) oxoisovalerate dehydrogenase alpha and beta fusion 47845 pdhA_pdhB 918825 pdhA_pdhB Chlamydophila pneumoniae J138 (pyruvate) oxoisovalerate dehydrogenase alpha and beta fusion NP_300094.1 45809 D 138677 CDS NP_300095.1 15835571 918826 complement(47878..49128) 1 NC_002491.1 hypothetical protein 49128 918826 CPj0034 Chlamydophila pneumoniae J138 hypothetical protein NP_300095.1 47878 R 138677 CDS NP_300096.1 15835572 918827 complement(49237..50700) 1 NC_002491.1 hypothetical protein 50700 918827 CPj0035 Chlamydophila pneumoniae J138 hypothetical protein NP_300096.1 49237 R 138677 CDS NP_300097.1 15835573 918828 50673..51470 1 NC_002491.1 hypothetical protein 51470 918828 CPj0036 Chlamydophila pneumoniae J138 hypothetical protein NP_300097.1 50673 D 138677 CDS NP_300098.1 15835574 918829 51463..51789 1 NC_002491.1 Pts phosphocarrier protein HPr 51789 ptsH 918829 ptsH Chlamydophila pneumoniae J138 Pts phosphocarrier protein HPr NP_300098.1 51463 D 138677 CDS NP_300099.1 15835575 918830 51790..53505 1 NC_002491.1 Pts PEP phosphotransferase 53505 ptsI 918830 ptsI Chlamydophila pneumoniae J138 Pts PEP phosphotransferase NP_300099.1 51790 D 138677 CDS NP_300100.1 15835576 918831 complement(53631..53921) 1 NC_002491.1 hypothetical protein 53921 ybaB 918831 ybaB Chlamydophila pneumoniae J138 hypothetical protein NP_300100.1 53631 R 138677 CDS NP_300101.1 15835577 918818 complement(53986..55314) 1 NC_002491.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 55314 dnaX_1 918818 dnaX_1 Chlamydophila pneumoniae J138 DNA polymerase III subunits gamma and tau NP_300101.1 53986 R 138677 CDS NP_300102.1 15835578 918798 55667..57016 1 NC_002491.1 hypothetical protein 57016 918798 CPj0041 Chlamydophila pneumoniae J138 hypothetical protein NP_300102.1 55667 D 138677 CDS NP_300103.1 15835579 918832 57074..57856 1 NC_002491.1 hypothetical protein 57856 918832 CPj0042 Chlamydophila pneumoniae J138 hypothetical protein NP_300103.1 57074 D 138677 CDS NP_300104.1 15835580 919253 58118..60046 1 NC_002491.1 hypothetical protein 60046 919253 CPj0043 Chlamydophila pneumoniae J138 hypothetical protein NP_300104.1 58118 D 138677 CDS NP_300105.1 15835581 918833 60090..60452 1 NC_002491.1 hypothetical protein 60452 918833 CPj0044 Chlamydophila pneumoniae J138 hypothetical protein NP_300105.1 60090 D 138677 CDS NP_300106.1 15835582 918834 60740..62947 1 NC_002491.1 hypothetical protein 62947 918834 CPj0045 Chlamydophila pneumoniae J138 hypothetical protein NP_300106.1 60740 D 138677 CDS NP_300107.1 15835583 918835 63136..63336 1 NC_002491.1 hypothetical protein 63336 918835 CPj0047 Chlamydophila pneumoniae J138 hypothetical protein NP_300107.1 63136 D 138677 CDS NP_300108.1 15835584 918836 63368..65485 1 NC_002491.1 hypothetical protein 65485 yqfF 918836 yqfF Chlamydophila pneumoniae J138 hypothetical protein NP_300108.1 63368 D 138677 CDS NP_300109.1 15835585 918837 complement(65495..65977) 1 NC_002491.1 hypothetical protein 65977 918837 CPj0049 Chlamydophila pneumoniae J138 hypothetical protein NP_300109.1 65495 R 138677 CDS NP_300110.1 15835586 918838 complement(66220..66489) 1 NC_002491.1 hypothetical protein 66489 918838 CPj0050 Chlamydophila pneumoniae J138 hypothetical protein NP_300110.1 66220 R 138677 CDS NP_300111.1 15835587 918840 66509..66790 1 NC_002491.1 hypothetical protein 66790 918840 CPj0051 Chlamydophila pneumoniae J138 hypothetical protein NP_300111.1 66509 D 138677 CDS NP_300112.1 15835588 918841 complement(66977..67681) 1 NC_002491.1 transformation of prophobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 67681 hemC 918841 hemC Chlamydophila pneumoniae J138 porphobilinogen deaminase NP_300112.1 66977 R 138677 CDS NP_300113.1 15835589 918842 complement(67659..69020) 1 NC_002491.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 69020 sms 918842 sms Chlamydophila pneumoniae J138 DNA repair protein RadA NP_300113.1 67659 R 138677 CDS NP_300114.1 15835590 918843 complement(68986..69699) 1 NC_002491.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 69699 rnc 918843 rnc Chlamydophila pneumoniae J138 ribonuclease III NP_300114.1 68986 R 138677 CDS NP_300115.1 15835591 918844 69805..70269 1 NC_002491.1 hypothetical protein 70269 918844 CPj0055 Chlamydophila pneumoniae J138 hypothetical protein NP_300115.1 69805 D 138677 CDS NP_300116.1 15835592 918845 70629..72425 1 NC_002491.1 phosphomannomutase 72425 mrsA 918845 mrsA Chlamydophila pneumoniae J138 phosphomannomutase NP_300116.1 70629 D 138677 CDS NP_300117.1 15835593 918846 72610..73233 1 NC_002491.1 superoxide dismutase (Mn) 73233 sodM 918846 sodM Chlamydophila pneumoniae J138 superoxide dismutase (Mn) NP_300117.1 72610 D 138677 CDS NP_300118.1 15835594 918847 73315..74241 1 NC_002491.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 74241 accD 918847 accD Chlamydophila pneumoniae J138 acetyl-CoA carboxylase subunit beta NP_300118.1 73315 D 138677 CDS NP_300119.1 15835595 918848 74292..74729 1 NC_002491.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 74729 dut 918848 dut Chlamydophila pneumoniae J138 deoxyuridine 5'-triphosphate nucleotidohydrolase NP_300119.1 74292 D 138677 CDS NP_300120.1 15835596 918849 74731..75207 1 NC_002491.1 Pts IIA protein 75207 ptsN_1 918849 ptsN_1 Chlamydophila pneumoniae J138 Pts IIA protein NP_300120.1 74731 D 138677 CDS NP_300121.1 15835597 918850 75210..75887 1 NC_002491.1 PTS system IIA protein 75887 ptsN_2 918850 ptsN_2 Chlamydophila pneumoniae J138 PTS system IIA protein NP_300121.1 75210 D 138677 CDS NP_300122.1 15835598 918851 75984..77369 1 NC_002491.1 hypothetical protein 77369 918851 CPj0062 Chlamydophila pneumoniae J138 hypothetical protein NP_300122.1 75984 D 138677 CDS NP_300123.1 15835599 918852 77788..77946 1 NC_002491.1 hypothetical protein 77946 918852 CPj0063 Chlamydophila pneumoniae J138 hypothetical protein NP_300123.1 77788 D 138677 CDS NP_300124.1 15835600 918853 78022..78255 1 NC_002491.1 hypothetical protein 78255 918853 CPj0064 Chlamydophila pneumoniae J138 hypothetical protein NP_300124.1 78022 D 138677 CDS NP_300125.1 15835601 918854 78600..80330 1 NC_002491.1 hypothetical protein 80330 918854 CPj0065 Chlamydophila pneumoniae J138 hypothetical protein NP_300125.1 78600 D 138677 CDS NP_300126.1 15835602 918855 80601..82334 1 NC_002491.1 hypothetical protein 82334 918855 CPj0066 Chlamydophila pneumoniae J138 hypothetical protein NP_300126.1 80601 D 138677 CDS NP_300127.1 15835603 918856 82629..83732 1 NC_002491.1 hypothetical protein 83732 918856 CPj0067 Chlamydophila pneumoniae J138 hypothetical protein NP_300127.1 82629 D 138677 CDS NP_300128.1 15835604 918857 complement(84004..84579) 1 NC_002491.1 hypothetical protein 84579 918857 CPj0068 Chlamydophila pneumoniae J138 hypothetical protein NP_300128.1 84004 R 138677 CDS NP_300129.1 15835605 918858 84976..86760 1 NC_002491.1 hypothetical protein 86760 918858 CPj0069 Chlamydophila pneumoniae J138 hypothetical protein NP_300129.1 84976 D 138677 CDS NP_300130.1 15835606 918860 complement(87266..87715) 1 NC_002491.1 hypothetical protein 87715 918860 CPj0071 Chlamydophila pneumoniae J138 hypothetical protein NP_300130.1 87266 R 138677 CDS NP_300131.1 15835607 918861 complement(87724..88731) 1 NC_002491.1 hypothetical protein 88731 918861 CPj0072 Chlamydophila pneumoniae J138 hypothetical protein NP_300131.1 87724 R 138677 CDS NP_300132.1 15835608 918862 89026..89247 1 NC_002491.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 89247 infA 918862 infA Chlamydophila pneumoniae J138 translation initiation factor IF-1 NP_300132.1 89026 D 138677 CDS NP_300133.1 15835609 918864 89444..90628 1 NC_002491.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 90628 tuf 918864 tuf Chlamydophila pneumoniae J138 elongation factor Tu NP_300133.1 89444 D 138677 CDS NP_300134.1 15835610 918866 90772..91023 1 NC_002491.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 91023 secE 918866 secE Chlamydophila pneumoniae J138 preprotein translocase subunit SecE NP_300134.1 90772 D 138677 CDS NP_300135.1 15835611 918867 91028..91576 1 NC_002491.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 91576 nusG 918867 nusG Chlamydophila pneumoniae J138 transcription antitermination protein NusG NP_300135.1 91028 D 138677 CDS NP_300136.1 15835612 918868 91683..92108 1 NC_002491.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 92108 rplK 918868 rplK Chlamydophila pneumoniae J138 50S ribosomal protein L11 NP_300136.1 91683 D 138677 CDS NP_300137.1 15835613 918870 92135..92833 1 NC_002491.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 92833 rplA 918870 rplA Chlamydophila pneumoniae J138 50S ribosomal protein L1 NP_300137.1 92135 D 138677 CDS NP_300138.1 15835614 918871 92849..93361 1 NC_002491.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 93361 rplJ 918871 rplJ Chlamydophila pneumoniae J138 50S ribosomal protein L10 NP_300138.1 92849 D 138677 CDS NP_300139.1 15835615 918872 93405..93794 1 NC_002491.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 93794 rplL 918872 rplL Chlamydophila pneumoniae J138 50S ribosomal protein L7/L12 NP_300139.1 93405 D 138677 CDS NP_300140.1 15835616 918873 93931..97689 1 NC_002491.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 97689 rpoB 918873 rpoB Chlamydophila pneumoniae J138 DNA-directed RNA polymerase subunit beta NP_300140.1 93931 D 138677 CDS NP_300141.1 15835617 918874 97713..101894 1 NC_002491.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 101894 rpoC 918874 rpoC Chlamydophila pneumoniae J138 DNA-directed RNA polymerase subunit beta' NP_300141.1 97713 D 138677 CDS NP_300142.1 15835618 918875 102003..102986 1 NC_002491.1 Maintains the balance of metabolites in the pentose-phosphate pathway; transaldolase B 102986 tal 918875 tal Chlamydophila pneumoniae J138 transaldolase B NP_300142.1 102003 D 138677 CDS NP_300143.1 15835619 918876 103033..103425 1 NC_002491.1 ferredoxin 103425 918876 CPj0084 Chlamydophila pneumoniae J138 ferredoxin NP_300143.1 103033 D 138677 CDS NP_300144.1 15835620 918877 complement(103434..104177) 1 NC_002491.1 hypothetical protein 104177 918877 CPj0085 Chlamydophila pneumoniae J138 hypothetical protein NP_300144.1 103434 R 138677 CDS NP_300145.1 15835621 918878 104575..105201 1 NC_002491.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the E subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit E 105201 atpE 918878 atpE Chlamydophila pneumoniae J138 V-type ATP synthase subunit E NP_300145.1 104575 D 138677 CDS NP_300146.1 15835622 918879 105250..106050 1 NC_002491.1 hypothetical protein 106050 918879 CPj0087 Chlamydophila pneumoniae J138 hypothetical protein NP_300146.1 105250 D 138677 CDS NP_300147.1 15835623 918880 106044..107819 1 NC_002491.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit A 107819 atpA 918880 atpA Chlamydophila pneumoniae J138 V-type ATP synthase subunit A NP_300147.1 106044 D 138677 CDS NP_300148.1 15835624 918881 107824..109140 1 NC_002491.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the B subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit B 109140 atpB 918881 atpB Chlamydophila pneumoniae J138 V-type ATP synthase subunit B NP_300148.1 107824 D 138677 CDS NP_300149.1 15835625 918882 109125..109754 1 NC_002491.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the D subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit D 109754 atpD 918882 atpD Chlamydophila pneumoniae J138 V-type ATP synthase subunit D NP_300149.1 109125 D 138677 CDS NP_300150.1 15835626 918883 109745..111727 1 NC_002491.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I is part of the membrane proton channel.; V-type ATP synthase subunit I 111727 atpI 918883 atpI Chlamydophila pneumoniae J138 V-type ATP synthase subunit I NP_300150.1 109745 D 138677 CDS NP_300151.1 15835627 918884 111822..112247 1 NC_002491.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits; V-type ATP synthase subunit K 112247 atpK 918884 atpK Chlamydophila pneumoniae J138 V-type ATP synthase subunit K NP_300151.1 111822 D 138677 CDS NP_300152.1 15835628 918885 112180..112689 1 NC_002491.1 hypothetical protein 112689 918885 CPj0093 Chlamydophila pneumoniae J138 hypothetical protein NP_300152.1 112180 D 138677 CDS NP_300153.1 15835629 918869 112823..115645 1 NC_002491.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 115645 valS 918869 valS Chlamydophila pneumoniae J138 valyl-tRNA synthetase NP_300153.1 112823 D 138677 CDS NP_300154.2 161353805 918839 115666..118464 1 NC_002491.1 PknD; responsible for phosphorylation of proteins on serine and threonine residues; similar to eukaryotic Ser/Thr kinases; in Chlamydia trachomatis itseems to interact with Pkn1, another serine/threonine-protein kinase; serine/threonine-protein kinase 118464 pknD 918839 pknD Chlamydophila pneumoniae J138 serine/threonine-protein kinase NP_300154.2 115666 D 138677 CDS NP_300155.1 15835631 918887 complement(118505..123985) 1 NC_002491.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 123985 uvrA 918887 uvrA Chlamydophila pneumoniae J138 excinuclease ABC subunit A NP_300155.1 118505 R 138677 CDS NP_300156.1 15835632 918888 124226..125680 1 NC_002491.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 125680 pyk 918888 pyk Chlamydophila pneumoniae J138 pyruvate kinase NP_300156.1 124226 D 138677 CDS NP_300157.1 15835633 918889 complement(125774..126799) 1 NC_002491.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 126799 htrB_2 918889 htrB_2 Chlamydophila pneumoniae J138 lipid A biosynthesis lauroyl acyltransferase NP_300157.1 125774 R 138677 CDS NP_300158.1 15835634 918890 complement(126681..127202) 1 NC_002491.1 acyltransferase 127202 htrB_1 918890 htrB_1 Chlamydophila pneumoniae J138 acyltransferase NP_300158.1 126681 R 138677 CDS NP_300159.1 15835635 918891 127304..127579 1 NC_002491.1 hypothetical protein 127579 918891 CPj0099 Chlamydophila pneumoniae J138 hypothetical protein NP_300159.1 127304 D 138677 CDS NP_300160.1 15835636 918892 complement(127590..128852) 1 NC_002491.1 hypothetical protein 128852 918892 CPj0100 Chlamydophila pneumoniae J138 hypothetical protein NP_300160.1 127590 R 138677 CDS NP_300161.1 15835637 918893 complement(128849..129643) 1 NC_002491.1 hypothetical protein 129643 ybbP 918893 ybbP Chlamydophila pneumoniae J138 hypothetical protein NP_300161.1 128849 R 138677 CDS NP_300162.1 15835638 918894 129834..131180 1 NC_002491.1 cytochrome oxidase subunit I 131180 cydA 918894 cydA Chlamydophila pneumoniae J138 cytochrome oxidase subunit I NP_300162.1 129834 D 138677 CDS NP_300163.1 15835639 918895 131191..132225 1 NC_002491.1 cytochrome oxidase subunit II 132225 cydB 918895 cydB Chlamydophila pneumoniae J138 cytochrome oxidase subunit II NP_300163.1 131191 D 138677 CDS NP_300164.1 15835640 918896 complement(132384..133586) 1 NC_002491.1 hypothetical protein 133586 918896 CPj0104 Chlamydophila pneumoniae J138 hypothetical protein NP_300164.1 132384 R 138677 CDS NP_300165.1 15835641 918897 complement(133737..134558) 1 NC_002491.1 hypothetical protein 134558 918897 CPj0105 Chlamydophila pneumoniae J138 hypothetical protein NP_300165.1 133737 R 138677 CDS NP_300166.1 15835642 918898 134802..136088 1 NC_002491.1 ATPase 136088 phoH 918898 phoH Chlamydophila pneumoniae J138 ATPase NP_300166.1 134802 D 138677 CDS NP_300167.1 15835643 918899 complement(136100..136873) 1 NC_002491.1 hypothetical protein 136873 918899 CPj0107 Chlamydophila pneumoniae J138 hypothetical protein NP_300167.1 136100 R 138677 CDS NP_300168.1 15835644 918900 complement(137011..137568) 1 NC_002491.1 hypothetical protein 137568 918900 CPj0108 Chlamydophila pneumoniae J138 hypothetical protein NP_300168.1 137011 R 138677 CDS NP_300169.1 15835645 918769 138366..141497 1 NC_002491.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase 141497 ileS 918769 ileS Chlamydophila pneumoniae J138 isoleucyl-tRNA synthetase NP_300169.1 138366 D 138677 CDS NP_300170.1 15835646 918774 complement(141535..143445) 1 NC_002491.1 signal peptidase I 143445 lepB 918774 lepB Chlamydophila pneumoniae J138 signal peptidase I NP_300170.1 141535 R 138677 CDS NP_300171.1 15835647 918773 complement(143642..144397) 1 NC_002491.1 hypothetical protein 144397 918773 CPj0111 Chlamydophila pneumoniae J138 hypothetical protein NP_300171.1 143642 R 138677 CDS NP_300172.1 15835648 918772 144478..144807 1 NC_002491.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 144807 rpmE2 918772 rpmE2 Chlamydophila pneumoniae J138 50S ribosomal protein L31 NP_300172.1 144478 D 138677 CDS NP_300173.1 15835649 918901 145046..146119 1 NC_002491.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 146119 prfA 918901 prfA Chlamydophila pneumoniae J138 peptide chain release factor 1 NP_300173.1 145046 D 138677 CDS NP_300174.1 15835650 918902 146109..146975 1 NC_002491.1 HemK; PrmC; transfers a methyl group from S-adenosyl-methionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB possibly stimulating release of completed polypeptide chains; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 146975 hemK 918902 hemK Chlamydophila pneumoniae J138 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase NP_300174.1 146109 D 138677 CDS NP_300175.1 15835651 918903 146990..148336 1 NC_002491.1 signal recognition particle GTPase 148336 ffh 918903 ffh Chlamydophila pneumoniae J138 signal recognition particle GTPase NP_300175.1 146990 D 138677 CDS NP_300176.1 15835652 918904 148327..148686 1 NC_002491.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 148686 rpsP 918904 rpsP Chlamydophila pneumoniae J138 30S ribosomal protein S16 NP_300176.1 148327 D 138677 CDS NP_300177.1 15835653 918905 148700..149785 1 NC_002491.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; Chlamydial proteins show a C-terminal extension of unknown function; tRNA (guanine-N(1)-)-methyltransferase 149785 trmD 918905 trmD Chlamydophila pneumoniae J138 tRNA (guanine-N(1)-)-methyltransferase NP_300177.1 148700 D 138677 CDS NP_300178.1 15835654 918906 149813..150178 1 NC_002491.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 150178 rplS 918906 rplS Chlamydophila pneumoniae J138 50S ribosomal protein L19 NP_300178.1 149813 D 138677 CDS NP_300179.1 15835655 918907 150234..150878 1 NC_002491.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 150878 rnhB 918907 rnhB Chlamydophila pneumoniae J138 ribonuclease HII NP_300179.1 150234 D 138677 CDS NP_300180.1 15835656 918908 150875..151492 1 NC_002491.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 151492 gmk 918908 gmk Chlamydophila pneumoniae J138 guanylate kinase NP_300180.1 150875 D 138677 CDS NP_300181.1 15835657 918909 151489..151782 1 NC_002491.1 hypothetical protein 151782 918909 CPj0121 Chlamydophila pneumoniae J138 hypothetical protein NP_300181.1 151489 D 138677 CDS NP_300182.1 15835658 918910 151782..153437 1 NC_002491.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 153437 metG 918910 metG Chlamydophila pneumoniae J138 methionyl-tRNA synthetase NP_300182.1 151782 D 138677 CDS NP_300183.1 15835659 918911 complement(153482..155680) 1 NC_002491.1 exodeoxyribonuclease V subunit alpha 155680 recD_1 918911 recD_1 Chlamydophila pneumoniae J138 exodeoxyribonuclease V subunit alpha NP_300183.1 153482 R 138677 CDS NP_300184.1 15835660 918912 156325..157782 1 NC_002491.1 hypothetical protein 157782 918912 CPj0124 Chlamydophila pneumoniae J138 hypothetical protein NP_300184.1 156325 D 138677 CDS NP_300185.1 15835661 918913 157807..158319 1 NC_002491.1 hypothetical protein 158319 918913 CPj0125 Chlamydophila pneumoniae J138 hypothetical protein NP_300185.1 157807 D 138677 CDS NP_300186.1 15835662 918914 158520..160799 1 NC_002491.1 hypothetical protein 160799 918914 CPj0126 Chlamydophila pneumoniae J138 hypothetical protein NP_300186.1 158520 D 138677 CDS NP_300187.1 15835663 918915 complement(160838..161854) 1 NC_002491.1 cationic amino acid transporter 161854 ytfF 918915 ytfF Chlamydophila pneumoniae J138 cationic amino acid transporter NP_300187.1 160838 R 138677 CDS NP_300188.1 15835664 918916 161988..162767 1 NC_002491.1 biotin--protein ligase 162767 918916 CPj0128 Chlamydophila pneumoniae J138 biotin--protein ligase NP_300188.1 161988 D 138677 CDS NP_300189.1 15835665 918917 complement(162772..163956) 1 NC_002491.1 hypothetical protein 163956 918917 CPj0130 Chlamydophila pneumoniae J138 hypothetical protein NP_300189.1 162772 R 138677 CDS NP_300190.1 15835666 918787 164260..165294 1 NC_002491.1 hypothetical protein 165294 918787 CPj0131 Chlamydophila pneumoniae J138 hypothetical protein NP_300190.1 164260 D 138677 CDS NP_300191.1 15835667 918918 165298..166275 1 NC_002491.1 hypothetical protein 166275 918918 CPj0132 Chlamydophila pneumoniae J138 hypothetical protein NP_300191.1 165298 D 138677 CDS NP_300192.1 15835668 918919 complement(166272..167045) 1 NC_002491.1 hypothetical protein 167045 918919 CPj0133 Chlamydophila pneumoniae J138 hypothetical protein NP_300192.1 166272 R 138677 CDS NP_300193.1 15835669 918921 complement(167175..168809) 1 NC_002491.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 168809 groEL 918921 groEL Chlamydophila pneumoniae J138 molecular chaperone GroEL NP_300193.1 167175 R 138677 CDS NP_300194.1 15835670 918922 complement(168851..169159) 1 NC_002491.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 169159 groES 918922 groES Chlamydophila pneumoniae J138 co-chaperonin GroES NP_300194.1 168851 R 138677 CDS NP_300195.1 15835671 918924 complement(169277..171112) 1 NC_002491.1 oligopeptidase 171112 pepF 918924 pepF Chlamydophila pneumoniae J138 oligopeptidase NP_300195.1 169277 R 138677 CDS NP_300196.1 15835672 918925 complement(171210..171965) 1 NC_002491.1 Acr family transporter 171965 ybgI 918925 ybgI Chlamydophila pneumoniae J138 Acr family transporter NP_300196.1 171210 R 138677 CDS NP_300197.1 15835673 918926 complement(172408..173730) 1 NC_002491.1 catalyzes the formation of 5-aminolevulinate from (S)-4-amino-5-oxopentanoate; glutamate-1-semialdehyde aminotransferase 173730 hemL 918926 hemL Chlamydophila pneumoniae J138 glutamate-1-semialdehyde aminotransferase NP_300197.1 172408 R 138677 CDS NP_300198.1 15835674 918928 complement(173801..174367) 1 NC_002491.1 hypothetical protein 174367 yqgE 918928 yqgE Chlamydophila pneumoniae J138 hypothetical protein NP_300198.1 173801 R 138677 CDS NP_300199.1 15835675 918929 complement(174381..174821) 1 NC_002491.1 hypothetical protein 174821 yqdE 918929 yqdE Chlamydophila pneumoniae J138 hypothetical protein NP_300199.1 174381 R 138677 CDS NP_300200.1 15835676 918930 complement(174818..175513) 1 NC_002491.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 175513 rpiA 918930 rpiA Chlamydophila pneumoniae J138 ribose-5-phosphate isomerase A NP_300200.1 174818 R 138677 CDS NP_300201.1 15835677 918931 complement(175524..175802) 1 NC_002491.1 hypothetical protein 175802 918931 CPj0142 Chlamydophila pneumoniae J138 hypothetical protein NP_300201.1 175524 R 138677 CDS NP_300202.1 15835678 918933 complement(175922..177046) 1 NC_002491.1 hypothetical protein 177046 yxjG_1 918933 yxjG_1 Chlamydophila pneumoniae J138 hypothetical protein NP_300202.1 175922 R 138677 CDS NP_300203.1 15835679 918934 177674..180274 1 NC_002491.1 Clp protease ATPase 180274 clpB 918934 clpB Chlamydophila pneumoniae J138 Clp protease ATPase NP_300203.1 177674 D 138677 CDS NP_300204.1 15835680 918936 180488..182083 1 NC_002491.1 hypothetical protein 182083 918936 CPj0145 Chlamydophila pneumoniae J138 hypothetical protein NP_300204.1 180488 D 138677 CDS NP_300205.1 15835681 918937 182324..182809 1 NC_002491.1 hypothetical protein 182809 918937 CPj0146 Chlamydophila pneumoniae J138 hypothetical protein NP_300205.1 182324 D 138677 CDS NP_300206.1 15835682 918938 182936..183385 1 NC_002491.1 hypothetical protein 183385 918938 CPj0147 Chlamydophila pneumoniae J138 hypothetical protein NP_300206.1 182936 D 138677 CDS NP_300207.1 15835683 918939 183557..185416 1 NC_002491.1 S/T protein kinase 185416 918939 CPj0148 Chlamydophila pneumoniae J138 S/T protein kinase NP_300207.1 183557 D 138677 CDS NP_300208.1 15835684 918940 185426..187414 1 NC_002491.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 187414 ligA 918940 ligA Chlamydophila pneumoniae J138 NAD-dependent DNA ligase LigA NP_300208.1 185426 D 138677 CDS NP_300209.1 15835685 918941 187545..192158 1 NC_002491.1 hypothetical protein 192158 918941 CPj0150 Chlamydophila pneumoniae J138 hypothetical protein NP_300209.1 187545 D 138677 CDS NP_300210.1 15835686 918942 complement(192333..193853) 1 NC_002491.1 monooxygenase 193853 mhpA 918942 mhpA Chlamydophila pneumoniae J138 monooxygenase NP_300210.1 192333 R 138677 CDS NP_300211.1 15835687 918943 complement(194026..194976) 1 NC_002491.1 hypothetical protein 194976 918943 CPj0152 Chlamydophila pneumoniae J138 hypothetical protein NP_300211.1 194026 R 138677 CDS NP_300212.1 15835688 918944 195144..197606 1 NC_002491.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 197606 leuS 918944 leuS Chlamydophila pneumoniae J138 leucyl-tRNA synthetase NP_300212.1 195144 D 138677 CDS NP_300213.1 15835689 918945 197603..198916 1 NC_002491.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 198916 gseA 918945 gseA Chlamydophila pneumoniae J138 3-deoxy-D-manno-octulosonic-acid transferase NP_300213.1 197603 D 138677 CDS NP_300214.1 15835690 918949 complement(199196..199402) 1 NC_002491.1 hypothetical protein 199402 918949 CPj0155 Chlamydophila pneumoniae J138 hypothetical protein NP_300214.1 199196 R 138677 CDS NP_300215.1 15835691 918950 complement(199478..199828) 1 NC_002491.1 hypothetical protein 199828 918950 CPj0156 Chlamydophila pneumoniae J138 hypothetical protein NP_300215.1 199478 R 138677 CDS NP_300216.1 15835692 918951 complement(200007..200435) 1 NC_002491.1 hypothetical protein 200435 918951 CPj0157 Chlamydophila pneumoniae J138 hypothetical protein NP_300216.1 200007 R 138677 CDS NP_300217.1 15835693 918952 complement(200603..201142) 1 NC_002491.1 hypothetical protein 201142 918952 CPj0158 Chlamydophila pneumoniae J138 hypothetical protein NP_300217.1 200603 R 138677 CDS NP_300218.1 15835694 918953 complement(201176..201484) 1 NC_002491.1 hypothetical protein 201484 918953 CPj0159 Chlamydophila pneumoniae J138 hypothetical protein NP_300218.1 201176 R 138677 CDS NP_300219.1 15835695 918955 complement(201780..203414) 1 NC_002491.1 catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; diphosphate--fructose-6-phosphate 1-phosphotransferase 203414 pfkA_1 918955 pfkA_1 Chlamydophila pneumoniae J138 diphosphate--fructose-6-phosphate 1-phosphotransferase NP_300219.1 201780 R 138677 CDS NP_300220.1 15835696 918956 complement(203418..204245) 1 NC_002491.1 acyltransferase 204245 918956 CPj0161 Chlamydophila pneumoniae J138 acyltransferase NP_300220.1 203418 R 138677 CDS NP_300221.1 15835697 918948 complement(204423..205451) 1 NC_002491.1 hypothetical protein 205451 918948 CPj0162 Chlamydophila pneumoniae J138 hypothetical protein NP_300221.1 204423 R 138677 CDS NP_300222.1 15835698 918920 205649..206020 1 NC_002491.1 hypothetical protein 206020 918920 CPj0163 Chlamydophila pneumoniae J138 hypothetical protein NP_300222.1 205649 D 138677 CDS NP_300223.1 15835699 918957 206121..206624 1 NC_002491.1 hypothetical protein 206624 918957 CPj0164 Chlamydophila pneumoniae J138 hypothetical protein NP_300223.1 206121 D 138677 CDS NP_300224.1 15835700 918958 206621..207208 1 NC_002491.1 hypothetical protein 207208 918958 CPj0165 Chlamydophila pneumoniae J138 hypothetical protein NP_300224.1 206621 D 138677 CDS NP_300225.1 15835701 918959 207253..207588 1 NC_002491.1 hypothetical protein 207588 918959 CPj0166 Chlamydophila pneumoniae J138 hypothetical protein NP_300225.1 207253 D 138677 CDS NP_300226.1 15835702 918960 complement(207597..207929) 1 NC_002491.1 hypothetical protein 207929 918960 CPj0167 Chlamydophila pneumoniae J138 hypothetical protein NP_300226.1 207597 R 138677 CDS NP_300227.1 15835703 918961 complement(208037..208264) 1 NC_002491.1 hypothetical protein 208264 918961 CPj0168 Chlamydophila pneumoniae J138 hypothetical protein NP_300227.1 208037 R 138677 CDS NP_300228.1 15835704 918962 complement(208330..209124) 1 NC_002491.1 hypothetical protein 209124 918962 CPj0169 Chlamydophila pneumoniae J138 hypothetical protein NP_300228.1 208330 R 138677 CDS NP_300229.1 15835705 918964 complement(209645..210649) 1 NC_002491.1 hypothetical protein 210649 918964 CPj0170 Chlamydophila pneumoniae J138 hypothetical protein NP_300229.1 209645 R 138677 CDS NP_300230.1 15835706 918965 complement(210769..212058) 1 NC_002491.1 GMP synthase 212058 guaA 918965 guaA Chlamydophila pneumoniae J138 GMP synthase NP_300230.1 210769 R 138677 CDS NP_300231.1 15835707 918966 complement(212060..212800) 1 NC_002491.1 inosine 5'-monophosphase dehydrogenase 212800 guaB 918966 guaB Chlamydophila pneumoniae J138 inosine 5'-monophosphase dehydrogenase NP_300231.1 212060 R 138677 CDS NP_300232.1 15835708 918967 complement(213335..213610) 1 NC_002491.1 hypothetical protein 213610 918967 CPj0173 Chlamydophila pneumoniae J138 hypothetical protein NP_300232.1 213335 R 138677 CDS NP_300233.1 15835709 918968 213880..214350 1 NC_002491.1 hypothetical protein 214350 918968 CPj0174 Chlamydophila pneumoniae J138 hypothetical protein NP_300233.1 213880 D 138677 CDS NP_300234.1 15835710 918969 214521..214901 1 NC_002491.1 hypothetical protein 214901 918969 CPj0175 Chlamydophila pneumoniae J138 hypothetical protein NP_300234.1 214521 D 138677 CDS NP_300235.1 15835711 918970 214909..216144 1 NC_002491.1 hypothetical protein 216144 918970 CPj0176 Chlamydophila pneumoniae J138 hypothetical protein NP_300235.1 214909 D 138677 CDS NP_300236.1 15835712 918971 complement(216228..217082) 1 NC_002491.1 hypothetical protein 217082 918971 CPj0177 Chlamydophila pneumoniae J138 hypothetical protein NP_300236.1 216228 R 138677 CDS NP_300237.1 15835713 918972 complement(217409..217675) 1 NC_002491.1 hypothetical protein 217675 918972 CPj0178 Chlamydophila pneumoniae J138 hypothetical protein NP_300237.1 217409 R 138677 CDS NP_300238.1 15835714 918973 complement(217676..218026) 1 NC_002491.1 hypothetical protein 218026 918973 CPj0179 Chlamydophila pneumoniae J138 hypothetical protein NP_300238.1 217676 R 138677 CDS NP_300239.1 15835715 918974 complement(217975..218529) 1 NC_002491.1 hypothetical protein 218529 918974 CPj0180 Chlamydophila pneumoniae J138 hypothetical protein NP_300239.1 217975 R 138677 CDS NP_300240.1 15835716 918975 complement(218397..218798) 1 NC_002491.1 hypothetical protein 218798 918975 CPj0181 Chlamydophila pneumoniae J138 hypothetical protein NP_300240.1 218397 R 138677 CDS NP_300241.1 15835717 918976 complement(218954..220318) 1 NC_002491.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 220318 accC 918976 accC Chlamydophila pneumoniae J138 acetyl-CoA carboxylase biotin carboxylase subunit NP_300241.1 218954 R 138677 CDS NP_300242.1 15835718 918978 complement(220315..220818) 1 NC_002491.1 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 220818 accB 918978 accB Chlamydophila pneumoniae J138 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit NP_300242.1 220315 R 138677 CDS NP_300243.1 15835719 918980 complement(220841..221398) 1 NC_002491.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 221398 efp_1 918980 efp_1 Chlamydophila pneumoniae J138 elongation factor P NP_300243.1 220841 R 138677 CDS NP_300244.1 15835720 918981 complement(221385..222074) 1 NC_002491.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 222074 rpe 918981 rpe Chlamydophila pneumoniae J138 ribulose-phosphate 3-epimerase NP_300244.1 221385 R 138677 CDS NP_300245.1 15835721 918982 222522..223694 1 NC_002491.1 hypothetical protein 223694 918982 CPj0186 Chlamydophila pneumoniae J138 hypothetical protein NP_300245.1 222522 D 138677 CDS NP_300246.1 15835722 918983 223871..224671 1 NC_002491.1 methylase 224671 918983 CPj0187 Chlamydophila pneumoniae J138 methylase NP_300246.1 223871 D 138677 CDS NP_300247.1 15835723 918984 224734..226026 1 NC_002491.1 hypothetical protein 226026 918984 CPj0188 Chlamydophila pneumoniae J138 hypothetical protein NP_300247.1 224734 D 138677 CDS NP_300248.1 15835724 918985 226696..229443 1 NC_002491.1 possible transmembrane protein; hypothetical protein 229443 918985 CPj0189 Chlamydophila pneumoniae J138 hypothetical protein NP_300248.1 226696 D 138677 CDS NP_300249.1 15835725 918986 229534..230892 1 NC_002491.1 hypothetical protein 230892 918986 CPj0190 Chlamydophila pneumoniae J138 hypothetical protein NP_300249.1 229534 D 138677 CDS NP_300250.1 15835726 918987 complement(230926..231606) 1 NC_002491.1 amino acid ABC transporter ATPase 231606 glnQ 918987 glnQ Chlamydophila pneumoniae J138 amino acid ABC transporter ATPase NP_300250.1 230926 R 138677 CDS NP_300251.1 15835727 918988 complement(231596..232249) 1 NC_002491.1 amino acid ABC transporter permease 232249 glnP 918988 glnP Chlamydophila pneumoniae J138 amino acid ABC transporter permease NP_300251.1 231596 R 138677 CDS NP_300252.1 15835728 918989 complement(232298..232741) 1 NC_002491.1 arginine repressor ArgR 232741 argR 918989 argR Chlamydophila pneumoniae J138 arginine repressor ArgR NP_300252.1 232298 R 138677 CDS NP_300253.1 15835729 918990 232825..233859 1 NC_002491.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 233859 gcp_2 918990 gcp_2 Chlamydophila pneumoniae J138 DNA-binding/iron metalloprotein/AP endonuclease NP_300253.1 232825 D 138677 CDS NP_300254.1 15835730 918991 233805..235403 1 NC_002491.1 oligopeptide binding protein 235403 oppA_1 918991 oppA_1 Chlamydophila pneumoniae J138 oligopeptide binding protein NP_300254.1 233805 D 138677 CDS NP_300255.1 15835731 918993 235554..237137 1 NC_002491.1 oligopeptide binding protein 237137 oppA_2 918993 oppA_2 Chlamydophila pneumoniae J138 oligopeptide binding protein NP_300255.1 235554 D 138677 CDS NP_300256.1 15835732 918994 237193..238500 1 NC_002491.1 oligopeptide binding protein 238500 oppA_3 918994 oppA_3 Chlamydophila pneumoniae J138 oligopeptide binding protein NP_300256.1 237193 D 138677 CDS NP_300257.1 15835733 918995 238784..240364 1 NC_002491.1 oligopeptide binding protein 240364 oppA_4 918995 oppA_4 Chlamydophila pneumoniae J138 oligopeptide binding protein NP_300257.1 238784 D 138677 CDS NP_300258.1 15835734 918786 240657..241601 1 NC_002491.1 oligopeptide permease 241601 oppB_1 918786 oppB_1 Chlamydophila pneumoniae J138 oligopeptide permease NP_300258.1 240657 D 138677 CDS NP_300259.1 15835735 918932 241632..242486 1 NC_002491.1 oligopeptide permease 242486 oppC_1 918932 oppC_1 Chlamydophila pneumoniae J138 oligopeptide permease NP_300259.1 241632 D 138677 CDS NP_300260.1 15835736 918979 242479..243333 1 NC_002491.1 peptide ABC transporter ATPase 243333 oppD 918979 oppD Chlamydophila pneumoniae J138 peptide ABC transporter ATPase NP_300260.1 242479 D 138677 CDS NP_300261.1 15835737 918935 243330..244118 1 NC_002491.1 peptide ABC transporter ATPase 244118 oppF 918935 oppF Chlamydophila pneumoniae J138 peptide ABC transporter ATPase NP_300261.1 243330 D 138677 CDS NP_300262.1 15835738 918789 244623..245420 1 NC_002491.1 hypothetical protein 245420 918789 CPj0203 Chlamydophila pneumoniae J138 hypothetical protein NP_300262.1 244623 D 138677 CDS NP_300263.1 15835739 918923 245432..245620 1 NC_002491.1 hypothetical protein 245620 918923 CPj0204 Chlamydophila pneumoniae J138 hypothetical protein NP_300263.1 245432 D 138677 CDS NP_300264.1 15835740 918996 245748..245945 1 NC_002491.1 hypothetical protein 245945 918996 CPj0205 Chlamydophila pneumoniae J138 hypothetical protein NP_300264.1 245748 D 138677 CDS NP_300265.1 15835741 918998 246024..246779 1 NC_002491.1 hypothetical protein 246779 918998 CPj0206 Chlamydophila pneumoniae J138 hypothetical protein NP_300265.1 246024 D 138677 CDS NP_300266.1 15835742 919000 246823..248235 1 NC_002491.1 dicarboxylase translocator 248235 ybhI 919000 ybhI Chlamydophila pneumoniae J138 dicarboxylase translocator NP_300266.1 246823 D 138677 CDS NP_300267.1 15835743 919001 248568..250220 1 NC_002491.1 catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; diphosphate--fructose-6-phosphate 1-phosphotransferase 250220 pfkA_2 919001 pfkA_2 Chlamydophila pneumoniae J138 diphosphate--fructose-6-phosphate 1-phosphotransferase NP_300267.1 248568 D 138677 CDS NP_300268.1 15835744 919002 250651..250890 1 NC_002491.1 hypothetical protein 250890 919002 CPj0209 Chlamydophila pneumoniae J138 hypothetical protein NP_300268.1 250651 D 138677 CDS NP_300269.1 15835745 919003 complement(251052..251999) 1 NC_002491.1 hypothetical protein 251999 919003 CPj0210 Chlamydophila pneumoniae J138 hypothetical protein NP_300269.1 251052 R 138677 CDS NP_300270.1 15835746 919004 complement(252075..252371) 1 NC_002491.1 hypothetical protein 252371 919004 CPj0211 Chlamydophila pneumoniae J138 hypothetical protein NP_300270.1 252075 R 138677 CDS NP_300271.1 15835747 919005 complement(252500..253681) 1 NC_002491.1 hypothetical protein 253681 919005 CPj0212 Chlamydophila pneumoniae J138 hypothetical protein NP_300271.1 252500 R 138677 CDS NP_300272.1 15835748 919006 complement(253729..253908) 1 NC_002491.1 hypothetical protein 253908 919006 CPj0213 Chlamydophila pneumoniae J138 hypothetical protein NP_300272.1 253729 R 138677 CDS NP_300273.1 15835749 919007 complement(254065..255279) 1 NC_002491.1 hypothetical protein 255279 919007 CPj0214 Chlamydophila pneumoniae J138 hypothetical protein NP_300273.1 254065 R 138677 CDS NP_300274.1 15835750 919008 complement(255378..256637) 1 NC_002491.1 hypothetical protein 256637 919008 CPj0215 Chlamydophila pneumoniae J138 hypothetical protein NP_300274.1 255378 R 138677 CDS NP_300275.1 15835751 919009 complement(256793..257230) 1 NC_002491.1 hypothetical protein 257230 919009 CPj0216 Chlamydophila pneumoniae J138 hypothetical protein NP_300275.1 256793 R 138677 CDS NP_300276.1 15835752 919010 257518..258204 1 NC_002491.1 hypothetical protein 258204 ypdP 919010 ypdP Chlamydophila pneumoniae J138 hypothetical protein NP_300276.1 257518 D 138677 CDS NP_300277.1 15835753 919012 complement(258201..258680) 1 NC_002491.1 hypothetical protein 258680 919012 CPj0218 Chlamydophila pneumoniae J138 hypothetical protein NP_300277.1 258201 R 138677 CDS NP_300278.1 15835754 919013 258979..260097 1 NC_002491.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4, 5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7- deazaguanosine); queuine tRNA-ribosyltransferase 260097 tgt 919013 tgt Chlamydophila pneumoniae J138 queuine tRNA-ribosyltransferase NP_300278.1 258979 D 138677 CDS NP_300279.1 15835755 919791 260318..260863 1 NC_002491.1 hypothetical protein 260863 919791 CPj0220 Chlamydophila pneumoniae J138 hypothetical protein NP_300279.1 260318 D 138677 CDS NP_300280.1 15835756 919789 261279..261689 1 NC_002491.1 hypothetical protein 261689 919789 CPj0221 Chlamydophila pneumoniae J138 hypothetical protein NP_300280.1 261279 D 138677 CDS NP_300281.1 15835757 919786 262126..262467 1 NC_002491.1 hypothetical protein 262467 919786 CPj0222 Chlamydophila pneumoniae J138 hypothetical protein NP_300281.1 262126 D 138677 CDS NP_300282.1 15835758 919785 262578..262958 1 NC_002491.1 hypothetical protein 262958 919785 CPj0223 Chlamydophila pneumoniae J138 hypothetical protein NP_300282.1 262578 D 138677 CDS NP_300283.1 15835759 919784 263057..263299 1 NC_002491.1 hypothetical protein 263299 919784 CPj0224 Chlamydophila pneumoniae J138 hypothetical protein NP_300283.1 263057 D 138677 CDS NP_300284.1 15835760 919794 263495..264166 1 NC_002491.1 hypothetical protein 264166 919794 CPj0225 Chlamydophila pneumoniae J138 hypothetical protein NP_300284.1 263495 D 138677 CDS NP_300285.1 15835761 919788 264188..264592 1 NC_002491.1 hypothetical protein 264592 919788 CPj0226 Chlamydophila pneumoniae J138 hypothetical protein NP_300285.1 264188 D 138677 CDS NP_300286.1 15835762 919777 complement(264628..265038) 1 NC_002491.1 disulfide oxidoreductase 265038 dsbB 919777 dsbB Chlamydophila pneumoniae J138 disulfide oxidoreductase NP_300286.1 264628 R 138677 CDS NP_300287.1 15835763 919779 complement(265031..265732) 1 NC_002491.1 disulfide bond chaperone 265732 dsbG 919779 dsbG Chlamydophila pneumoniae J138 disulfide bond chaperone NP_300287.1 265031 R 138677 CDS NP_300288.1 15835764 919751 265950..267185 1 NC_002491.1 hypothetical protein 267185 919751 CPj0229 Chlamydophila pneumoniae J138 hypothetical protein NP_300288.1 265950 D 138677 CDS NP_300289.1 15835765 919756 complement(267195..267875) 1 NC_002491.1 hypothetical protein 267875 919756 CPj0230 Chlamydophila pneumoniae J138 hypothetical protein NP_300289.1 267195 R 138677 CDS NP_300290.1 15835766 919015 complement(267872..268579) 1 NC_002491.1 nitrate/iron ABC transporter ATPase 268579 tauB 919015 tauB Chlamydophila pneumoniae J138 nitrate/iron ABC transporter ATPase NP_300290.1 267872 R 138677 CDS NP_300291.1 15835767 918785 complement(268851..269744) 1 NC_002491.1 5'-methylthioadenosine nucleosidase 269744 918785 CPj0232 Chlamydophila pneumoniae J138 5'-methylthioadenosine nucleosidase NP_300291.1 268851 R 138677 CDS NP_300292.1 15835768 918784 complement(269867..270046) 1 NC_002491.1 hypothetical protein 270046 918784 CPj0233 Chlamydophila pneumoniae J138 hypothetical protein NP_300292.1 269867 R 138677 CDS NP_300293.1 15835769 919017 complement(270167..270862) 1 NC_002491.1 hypothetical protein 270862 919017 CPj0234 Chlamydophila pneumoniae J138 hypothetical protein NP_300293.1 270167 R 138677 CDS NP_300294.1 15835770 919018 271038..271802 1 NC_002491.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 271802 kdsB 919018 kdsB Chlamydophila pneumoniae J138 3-deoxy-manno-octulosonate cytidylyltransferase NP_300294.1 271038 D 138677 CDS NP_300295.1 15835771 919011 271778..273391 1 NC_002491.1 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 273391 pyrG 919011 pyrG Chlamydophila pneumoniae J138 CTP synthetase NP_300295.1 271778 D 138677 CDS NP_300296.1 15835772 918886 273384..273839 1 NC_002491.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase 273839 yggF 918886 yggF Chlamydophila pneumoniae J138 Holliday junction resolvase NP_300296.1 273384 D 138677 CDS NP_300297.1 15835773 918927 273925..275463 1 NC_002491.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 275463 zwf 918927 zwf Chlamydophila pneumoniae J138 glucose-6-phosphate 1-dehydrogenase NP_300297.1 273925 D 138677 CDS NP_300298.1 15835774 918768 275689..276297 1 NC_002491.1 catalyzes the formation of 6-phospho-D-gluconate from 6-phospho-D-glucono-1,5-lactone; 6-phosphogluconolactonase 276297 devB 918768 devB Chlamydophila pneumoniae J138 6-phosphogluconolactonase NP_300298.1 275689 D 138677 CDS NP_300299.1 15835775 919019 complement(276317..277483) 1 NC_002491.1 hypothetical protein 277483 919019 CPj0240 Chlamydophila pneumoniae J138 hypothetical protein NP_300299.1 276317 R 138677 CDS NP_300300.1 15835776 919020 complement(277822..278976) 1 NC_002491.1 hypothetical protein 278976 919020 CPj0241 Chlamydophila pneumoniae J138 hypothetical protein NP_300300.1 277822 R 138677 CDS NP_300301.1 15835777 919021 complement(279106..279540) 1 NC_002491.1 hypothetical protein 279540 919021 CPj0242 Chlamydophila pneumoniae J138 hypothetical protein NP_300301.1 279106 R 138677 CDS NP_300302.1 15835778 919022 complement(279752..280177) 1 NC_002491.1 hypothetical protein 280177 919022 CPj0243 Chlamydophila pneumoniae J138 hypothetical protein NP_300302.1 279752 R 138677 CDS NP_300303.1 15835779 919023 280540..281181 1 NC_002491.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 281181 adk 919023 adk Chlamydophila pneumoniae J138 adenylate kinase NP_300303.1 280540 D 138677 CDS NP_300304.1 15835780 919024 281267..282124 1 NC_002491.1 polysaccharide hydrolase-invasin repeat-containing protein 282124 ydhO 919024 ydhO Chlamydophila pneumoniae J138 polysaccharide hydrolase-invasin repeat-containing protein NP_300304.1 281267 D 138677 CDS NP_300305.1 15835781 919025 complement(282170..282574) 1 NC_002491.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 282574 rpsI 919025 rpsI Chlamydophila pneumoniae J138 30S ribosomal protein S9 NP_300305.1 282170 R 138677 CDS NP_300306.1 15835782 919026 complement(282588..283037) 1 NC_002491.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 283037 rplM 919026 rplM Chlamydophila pneumoniae J138 50S ribosomal protein L13 NP_300306.1 282588 R 138677 CDS NP_300307.1 15835783 919027 complement(283269..283949) 1 NC_002491.1 ABC transporter ATPase 283949 ycfV 919027 ycfV Chlamydophila pneumoniae J138 ABC transporter ATPase NP_300307.1 283269 R 138677 CDS NP_300308.1 15835784 919028 complement(283952..285463) 1 NC_002491.1 hypothetical protein 285463 919028 CPj0249 Chlamydophila pneumoniae J138 hypothetical protein NP_300308.1 283952 R 138677 CDS NP_300309.1 15835785 919029 complement(285521..285679) 1 NC_002491.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 285679 rpmG 919029 rpmG Chlamydophila pneumoniae J138 50S ribosomal protein L33 NP_300309.1 285521 R 138677 CDS NP_300310.1 15835786 919030 285682..287184 1 NC_002491.1 hypothetical protein 287184 919030 CPj0251 Chlamydophila pneumoniae J138 hypothetical protein NP_300310.1 285682 D 138677 CDS NP_300311.1 15835787 919031 complement(287195..287707) 1 NC_002491.1 frame-shift with CPj0253; hypothetical protein 287707 919031 CPj0252 Chlamydophila pneumoniae J138 hypothetical protein NP_300311.1 287195 R 138677 CDS NP_300312.1 15835788 919032 complement(287569..288078) 1 NC_002491.1 hypothetical protein 288078 919032 CPj0253 Chlamydophila pneumoniae J138 hypothetical protein NP_300312.1 287569 R 138677 CDS NP_300313.1 15835789 919033 complement(288078..288884) 1 NC_002491.1 hypothetical protein 288884 919033 CPj0254 Chlamydophila pneumoniae J138 hypothetical protein NP_300313.1 288078 R 138677 CDS NP_300314.1 15835790 919035 complement(288948..289787) 1 NC_002491.1 hypothetical protein 289787 919035 CPj0255 Chlamydophila pneumoniae J138 hypothetical protein NP_300314.1 288948 R 138677 CDS NP_300315.1 15835791 919036 complement(290017..290886) 1 NC_002491.1 hypothetical protein 290886 919036 CPj0256 Chlamydophila pneumoniae J138 hypothetical protein NP_300315.1 290017 R 138677 CDS NP_300316.1 15835792 919037 complement(290886..291749) 1 NC_002491.1 hypothetical protein 291749 919037 CPj0257 Chlamydophila pneumoniae J138 hypothetical protein NP_300316.1 290886 R 138677 CDS NP_300317.1 15835793 919038 complement(291752..292138) 1 NC_002491.1 frame-shift with CPj0259; hypothetical protein 292138 919038 CPj0258 Chlamydophila pneumoniae J138 hypothetical protein NP_300317.1 291752 R 138677 CDS NP_300318.1 15835794 919039 complement(292060..292653) 1 NC_002491.1 hypothetical protein 292653 919039 CPj0259 Chlamydophila pneumoniae J138 hypothetical protein NP_300318.1 292060 R 138677 CDS NP_300319.1 15835795 919042 complement(293167..293667) 1 NC_002491.1 protein translocase subunit 293667 secA_1 919042 secA_1 Chlamydophila pneumoniae J138 protein translocase subunit NP_300319.1 293167 R 138677 CDS NP_300320.1 15835796 919043 293924..294658 1 NC_002491.1 PP-loop superfamily ATPase 294658 ydaO 919043 ydaO Chlamydophila pneumoniae J138 PP-loop superfamily ATPase NP_300320.1 293924 D 138677 CDS NP_300321.1 15835797 919034 294713..295558 1 NC_002491.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 295558 surE 919034 surE Chlamydophila pneumoniae J138 stationary phase survival protein SurE NP_300321.1 294713 D 138677 CDS NP_300322.1 15835798 919045 295871..296761 1 NC_002491.1 hypothetical protein 296761 yqfU 919045 yqfU Chlamydophila pneumoniae J138 hypothetical protein NP_300322.1 295871 D 138677 CDS NP_300323.1 15835799 919046 complement(296774..297352) 1 NC_002491.1 aromatic acid decarboxylase 297352 ubiD 919046 ubiD Chlamydophila pneumoniae J138 aromatic acid decarboxylase NP_300323.1 296774 R 138677 CDS NP_300324.1 15835800 919047 complement(297349..298242) 1 NC_002491.1 UbiA prenyltransferase catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; prenyltransferase 298242 ubiA 919047 ubiA Chlamydophila pneumoniae J138 prenyltransferase NP_300324.1 297349 R 138677 CDS NP_300325.1 15835801 919048 298806..299501 1 NC_002491.1 hypothetical protein 299501 919048 CPj0266 Chlamydophila pneumoniae J138 hypothetical protein NP_300325.1 298806 D 138677 CDS NP_300326.1 15835802 919049 299744..300535 1 NC_002491.1 hypothetical protein 300535 919049 CPj0267 Chlamydophila pneumoniae J138 hypothetical protein NP_300326.1 299744 D 138677 CDS NP_300327.1 15835803 919050 300557..300943 1 NC_002491.1 hypothetical protein 300943 919050 CPj0268 Chlamydophila pneumoniae J138 hypothetical protein NP_300327.1 300557 D 138677 CDS NP_300328.1 15835804 919051 complement(301095..302072) 1 NC_002491.1 dipeptidase 302072 919051 CPj0269 Chlamydophila pneumoniae J138 dipeptidase NP_300328.1 301095 R 138677 CDS NP_300329.1 15835805 919052 complement(302087..302947) 1 NC_002491.1 SuA5 superfamily-related protein 302947 ywlC 919052 ywlC Chlamydophila pneumoniae J138 SuA5 superfamily-related protein NP_300329.1 302087 R 138677 CDS NP_300330.1 15835806 919054 303256..303987 1 NC_002491.1 lysophospholipase esterase 303987 919054 CPj0271 Chlamydophila pneumoniae J138 lysophospholipase esterase NP_300330.1 303256 D 138677 CDS NP_300331.1 15835807 919055 complement(303959..304855) 1 NC_002491.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 304855 dnaX_2 919055 dnaX_2 Chlamydophila pneumoniae J138 DNA polymerase III subunit delta' NP_300331.1 303959 R 138677 CDS NP_300332.1 15835808 919056 complement(304846..305466) 1 NC_002491.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 305466 tmk 919056 tmk Chlamydophila pneumoniae J138 thymidylate kinase NP_300332.1 304846 R 138677 CDS NP_300333.1 15835809 919058 complement(305471..307975) 1 NC_002491.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 307975 gyrA_1 919058 gyrA_1 Chlamydophila pneumoniae J138 DNA gyrase subunit A NP_300333.1 305471 R 138677 CDS NP_300334.1 15835810 919057 complement(307991..310408) 1 NC_002491.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 310408 gyrB 919057 gyrB Chlamydophila pneumoniae J138 DNA gyrase subunit B NP_300334.1 307991 R 138677 CDS NP_300335.1 15835811 919870 complement(310412..310759) 1 NC_002491.1 hypothetical protein 310759 919870 CPj0276 Chlamydophila pneumoniae J138 hypothetical protein NP_300335.1 310412 R 138677 CDS NP_300336.1 15835812 919868 complement(311023..311532) 1 NC_002491.1 hypothetical protein 311532 919868 CPj0277 Chlamydophila pneumoniae J138 hypothetical protein NP_300336.1 311023 R 138677 CDS NP_300337.1 15835813 919059 complement(311679..312497) 1 NC_002491.1 hypothetical protein 312497 919059 CPj0278 Chlamydophila pneumoniae J138 hypothetical protein NP_300337.1 311679 R 138677 CDS NP_300338.1 15835814 919863 complement(312494..313159) 1 NC_002491.1 ABC transporter permease 313159 919863 CPj0279 Chlamydophila pneumoniae J138 ABC transporter permease NP_300338.1 312494 R 138677 CDS NP_300339.1 15835815 918767 complement(313169..314194) 1 NC_002491.1 dipeptide transporter ATPase 314194 dppF_1 918767 dppF_1 Chlamydophila pneumoniae J138 dipeptide transporter ATPase NP_300339.1 313169 R 138677 CDS NP_300340.1 15835816 919064 314679..315728 1 NC_002491.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; fructose-bisphosphate aldolase 315728 dhnA 919064 dhnA Chlamydophila pneumoniae J138 fructose-bisphosphate aldolase NP_300340.1 314679 D 138677 CDS NP_300341.1 15835817 919065 315748..317154 1 NC_002491.1 amino acid transporter 317154 xasA 919065 xasA Chlamydophila pneumoniae J138 amino acid transporter NP_300341.1 315748 D 138677 CDS NP_300342.1 15835818 919063 complement(317151..317981) 1 NC_002491.1 hypothetical protein 317981 919063 CPj0283 Chlamydophila pneumoniae J138 hypothetical protein NP_300342.1 317151 R 138677 CDS NP_300343.1 15835819 919061 complement(318170..318667) 1 NC_002491.1 hypothetical protein 318667 919061 CPj0284 Chlamydophila pneumoniae J138 hypothetical protein NP_300343.1 318170 R 138677 CDS NP_300344.1 15835820 919062 complement(318670..320217) 1 NC_002491.1 hypothetical protein 320217 919062 CPj0285 Chlamydophila pneumoniae J138 hypothetical protein NP_300344.1 318670 R 138677 CDS NP_300345.1 15835821 919060 complement(320269..321681) 1 NC_002491.1 CBS domain; Mg++ transporter 321681 mgtE 919060 mgtE Chlamydophila pneumoniae J138 Mg++ transporter NP_300345.1 320269 R 138677 CDS NP_300346.1 15835822 919068 complement(321708..323843) 1 NC_002491.1 hypothetical protein 323843 919068 CPj0287 Chlamydophila pneumoniae J138 hypothetical protein NP_300346.1 321708 R 138677 CDS NP_300347.1 15835823 919069 complement(324190..325338) 1 NC_002491.1 hypothetical protein 325338 919069 CPj0288 Chlamydophila pneumoniae J138 hypothetical protein NP_300347.1 324190 R 138677 CDS NP_300348.1 15835824 919072 325434..326621 1 NC_002491.1 neutral amino acid (glutamate) transporter 326621 aaaT 919072 aaaT Chlamydophila pneumoniae J138 neutral amino acid (glutamate) transporter NP_300348.1 325434 D 138677 CDS NP_300349.1 15835825 919850 326664..328148 1 NC_002491.1 Na-dependent transporter 328148 919850 CPj0290 Chlamydophila pneumoniae J138 Na-dependent transporter NP_300349.1 326664 D 138677 CDS NP_300350.1 15835826 919073 328289..328819 1 NC_002491.1 inclusion membrane protein B 328819 incB 919073 incB Chlamydophila pneumoniae J138 inclusion membrane protein B NP_300350.1 328289 D 138677 CDS NP_300351.1 15835827 919074 328850..329461 1 NC_002491.1 inclusion membrane protein C 329461 incC 919074 incC Chlamydophila pneumoniae J138 inclusion membrane protein C NP_300351.1 328850 D 138677 CDS NP_300352.1 15835828 919071 329571..332348 1 NC_002491.1 hypothetical protein 332348 919071 CPj0293 Chlamydophila pneumoniae J138 hypothetical protein NP_300352.1 329571 D 138677 CDS NP_300353.1 15835829 919070 332714..333127 1 NC_002491.1 cAMP-dependent protein kinase regulatory subunit 333127 919070 CPj0294 Chlamydophila pneumoniae J138 cAMP-dependent protein kinase regulatory subunit NP_300353.1 332714 D 138677 CDS NP_300354.1 15835830 919067 complement(333246..333485) 1 NC_002491.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 333485 acpP 919067 acpP Chlamydophila pneumoniae J138 acyl carrier protein NP_300354.1 333246 R 138677 CDS NP_300355.1 15835831 919066 complement(333641..334387) 1 NC_002491.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 334387 fabG 919066 fabG Chlamydophila pneumoniae J138 3-ketoacyl-ACP reductase NP_300355.1 333641 R 138677 CDS NP_300356.1 15835832 919078 complement(334393..335319) 1 NC_002491.1 ACP S-malonyltransferase 335319 fabD 919078 fabD Chlamydophila pneumoniae J138 ACP S-malonyltransferase NP_300356.1 334393 R 138677 CDS NP_300357.1 15835833 919081 complement(335336..336343) 1 NC_002491.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 336343 fabH 919081 fabH Chlamydophila pneumoniae J138 3-oxoacyl-ACP synthase NP_300357.1 335336 R 138677 CDS NP_300358.1 15835834 919082 336438..337040 1 NC_002491.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 337040 recR 919082 recR Chlamydophila pneumoniae J138 recombination protein RecR NP_300358.1 336438 D 138677 CDS NP_300359.1 15835835 919083 337405..339777 1 NC_002491.1 hypothetical protein 339777 yaeT 919083 yaeT Chlamydophila pneumoniae J138 hypothetical protein NP_300359.1 337405 D 138677 CDS NP_300360.1 15835836 919084 339872..340387 1 NC_002491.1 hypothetical protein 340387 919084 CPj0301 Chlamydophila pneumoniae J138 hypothetical protein NP_300360.1 339872 D 138677 CDS NP_300361.1 15835837 919085 340409..341491 1 NC_002491.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 341491 lpxD 919085 lpxD Chlamydophila pneumoniae J138 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase NP_300361.1 340409 D 138677 CDS NP_300362.1 15835838 919086 complement(341540..342580) 1 NC_002491.1 hypothetical protein 342580 919086 CPj0303 Chlamydophila pneumoniae J138 hypothetical protein NP_300362.1 341540 R 138677 CDS NP_300363.1 15835839 919080 342755..343783 1 NC_002491.1 pyruvate dehydrogenase alpha 343783 pdhA 919080 pdhA Chlamydophila pneumoniae J138 pyruvate dehydrogenase alpha NP_300363.1 342755 D 138677 CDS NP_300364.1 15835840 919079 343776..344762 1 NC_002491.1 pyruvate dehydrogenase beta 344762 pdhB 919079 pdhB Chlamydophila pneumoniae J138 pyruvate dehydrogenase beta NP_300364.1 343776 D 138677 CDS NP_300365.1 15835841 919077 344767..346056 1 NC_002491.1 Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA; branched-chain alpha-keto acid dehydrogenase subunit E2 346056 pdhC 919077 pdhC Chlamydophila pneumoniae J138 branched-chain alpha-keto acid dehydrogenase subunit E2 NP_300365.1 344767 D 138677 CDS NP_300366.1 15835842 919076 complement(346134..348608) 1 NC_002491.1 glycogen phosphorylase 348608 glgP 919076 glgP Chlamydophila pneumoniae J138 glycogen phosphorylase NP_300366.1 346134 R 138677 CDS NP_300367.1 15835843 919075 348856..349221 1 NC_002491.1 hypothetical protein 349221 919075 CPj0308 Chlamydophila pneumoniae J138 hypothetical protein NP_300367.1 348856 D 138677 CDS NP_300368.1 15835844 919087 complement(349214..350596) 1 NC_002491.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosome replication initiator DnaA 350596 dnaA 919087 dnaA Chlamydophila pneumoniae J138 chromosome replication initiator DnaA NP_300368.1 349214 R 138677 CDS NP_300369.1 15835845 919088 complement(350668..353055) 1 NC_002491.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 353055 60IM 919088 60IM Chlamydophila pneumoniae J138 inner membrane protein translocase component YidC NP_300369.1 350668 R 138677 CDS NP_300370.1 15835846 919089 complement(353194..354060) 1 NC_002491.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 354060 lgt 919089 lgt Chlamydophila pneumoniae J138 prolipoprotein diacylglyceryl transferase NP_300370.1 353194 R 138677 CDS NP_300371.1 15835847 919859 354146..354601 1 NC_002491.1 hypothetical protein 354601 919859 CPj0312 Chlamydophila pneumoniae J138 hypothetical protein NP_300371.1 354146 D 138677 CDS NP_300372.1 15835848 919853 354612..354980 1 NC_002491.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 354980 acpS 919853 acpS Chlamydophila pneumoniae J138 4'-phosphopantetheinyl transferase NP_300372.1 354612 D 138677 CDS NP_300373.1 15835849 919090 complement(354972..355907) 1 NC_002491.1 thioredoxin reductase 355907 trxB 919090 trxB Chlamydophila pneumoniae J138 thioredoxin reductase NP_300373.1 354972 R 138677 CDS NP_300374.1 15835850 919091 356599..358341 1 NC_002491.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 358341 rpsA 919091 rpsA Chlamydophila pneumoniae J138 30S ribosomal protein S1 NP_300374.1 356599 D 138677 CDS NP_300375.1 15835851 919092 358442..359746 1 NC_002491.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 359746 nusA 919092 nusA Chlamydophila pneumoniae J138 transcription elongation factor NusA NP_300375.1 358442 D 138677 CDS NP_300376.1 15835852 919093 359703..362375 1 NC_002491.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 362375 infB 919093 infB Chlamydophila pneumoniae J138 translation initiation factor IF-2 NP_300376.1 359703 D 138677 CDS NP_300377.1 15835853 919094 362389..362751 1 NC_002491.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 362751 rbfA 919094 rbfA Chlamydophila pneumoniae J138 ribosome-binding factor A NP_300377.1 362389 D 138677 CDS NP_300378.1 15835854 919095 362797..363504 1 NC_002491.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 363504 truB 919095 truB Chlamydophila pneumoniae J138 tRNA pseudouridine synthase B NP_300378.1 362797 D 138677 CDS NP_300379.1 15835855 919096 363482..364408 1 NC_002491.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 364408 ribF 919096 ribF Chlamydophila pneumoniae J138 bifunctional riboflavin kinase/FMN adenylyltransferase NP_300379.1 363482 D 138677 CDS NP_300380.1 15835856 919097 complement(364386..365480) 1 NC_002491.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 365480 ychF 919097 ychF Chlamydophila pneumoniae J138 GTP-dependent nucleic acid-binding protein EngD NP_300380.1 364386 R 138677 CDS NP_300381.1 15835857 919098 365871..366953 1 NC_002491.1 type III secretion system protein 366953 yscU 919098 yscU Chlamydophila pneumoniae J138 type III secretion system protein NP_300381.1 365871 D 138677 CDS NP_300382.1 15835858 919099 366953..369085 1 NC_002491.1 low calcium response D 369085 lcrD 919099 lcrD Chlamydophila pneumoniae J138 low calcium response D NP_300382.1 366953 D 138677 CDS NP_300383.1 15835859 919100 369114..370313 1 NC_002491.1 low calcium response E 370313 lcrE 919100 lcrE Chlamydophila pneumoniae J138 low calcium response E NP_300383.1 369114 D 138677 CDS NP_300384.1 15835860 919101 370330..370773 1 NC_002491.1 secretion chaperone 370773 sycE 919101 sycE Chlamydophila pneumoniae J138 secretion chaperone NP_300384.1 370330 D 138677 CDS NP_300385.1 15835861 919102 370770..372350 1 NC_002491.1 amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 372350 malQ 919102 malQ Chlamydophila pneumoniae J138 4-alpha-glucanotransferase NP_300385.1 370770 D 138677 CDS NP_300386.1 15835862 919103 372567..372836 1 NC_002491.1 required for 70S ribosome assembly; 50S ribosomal protein L28 372836 rpmB 919103 rpmB Chlamydophila pneumoniae J138 50S ribosomal protein L28 NP_300386.1 372567 D 138677 CDS NP_300387.1 15835863 919104 372863..374617 1 NC_002491.1 hypothetical protein 374617 919104 CPj0328 Chlamydophila pneumoniae J138 hypothetical protein NP_300387.1 372863 D 138677 CDS NP_300388.1 15835864 919105 374710..375771 1 NC_002491.1 phopholipase D superfamily protein 375771 919105 CPj0329 Chlamydophila pneumoniae J138 phopholipase D superfamily protein NP_300388.1 374710 D 138677 CDS NP_300389.1 15835865 919106 complement(375821..376297) 1 NC_002491.1 hypothetical protein 376297 919106 CPj0330 Chlamydophila pneumoniae J138 hypothetical protein NP_300389.1 375821 R 138677 CDS NP_300390.1 15835866 919299 complement(376320..378059) 1 NC_002491.1 hypothetical protein 378059 919299 CPj0331 Chlamydophila pneumoniae J138 hypothetical protein NP_300390.1 376320 R 138677 CDS NP_300391.1 15835867 919296 complement(378155..378277) 1 NC_002491.1 hypothetical protein 378277 919296 CPj0332 Chlamydophila pneumoniae J138 hypothetical protein NP_300391.1 378155 R 138677 CDS NP_300392.1 15835868 919107 complement(378419..378712) 1 NC_002491.1 LtuB protein 378712 919107 CPj0333 Chlamydophila pneumoniae J138 LtuB protein NP_300392.1 378419 R 138677 CDS NP_300393.1 15835869 919108 378933..379448 1 NC_002491.1 hypothetical protein 379448 919108 CPj0334 Chlamydophila pneumoniae J138 hypothetical protein NP_300393.1 378933 D 138677 CDS NP_300394.1 15835870 919109 379439..380299 1 NC_002491.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 380299 folD 919109 folD Chlamydophila pneumoniae J138 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase NP_300394.1 379439 D 138677 CDS NP_300395.1 15835871 919110 380272..381216 1 NC_002491.1 hypothetical protein 381216 yojL 919110 yojL Chlamydophila pneumoniae J138 hypothetical protein NP_300395.1 380272 D 138677 CDS NP_300396.1 15835872 919111 complement(381194..381649) 1 NC_002491.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 381649 smpB 919111 smpB Chlamydophila pneumoniae J138 SsrA-binding protein NP_300396.1 381194 R 138677 CDS NP_300397.1 15835873 919112 381900..383000 1 NC_002491.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 383000 dnaN 919112 dnaN Chlamydophila pneumoniae J138 DNA polymerase III subunit beta NP_300397.1 381900 D 138677 CDS NP_300398.1 15835874 919113 383036..383659 1 NC_002491.1 ATPase 383659 919113 CPj0339 Chlamydophila pneumoniae J138 ATPase NP_300398.1 383036 D 138677 CDS NP_300399.1 15835875 919114 383476..384120 1 NC_002491.1 hypothetical protein 384120 919114 CPj0340 Chlamydophila pneumoniae J138 hypothetical protein NP_300399.1 383476 D 138677 CDS NP_300400.1 15835876 919115 384244..385221 1 NC_002491.1 leader 19 peptide; hypothetical protein 385221 919115 CPj0342 Chlamydophila pneumoniae J138 hypothetical protein NP_300400.1 384244 D 138677 CDS NP_300401.1 15835877 919116 complement(385178..387043) 1 NC_002491.1 metalloprotease 387043 yaeL 919116 yaeL Chlamydophila pneumoniae J138 metalloprotease NP_300401.1 385178 R 138677 CDS NP_300402.1 15835878 919117 complement(387056..388195) 1 NC_002491.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 388195 yaeM 919117 yaeM Chlamydophila pneumoniae J138 1-deoxy-D-xylulose 5-phosphate reductoisomerase NP_300402.1 387056 R 138677 CDS NP_300403.1 15835879 919118 complement(388324..389298) 1 NC_002491.1 hypothetical protein 389298 ytgD 919118 ytgD Chlamydophila pneumoniae J138 hypothetical protein NP_300403.1 388324 R 138677 CDS NP_300404.1 15835880 919119 complement(389298..390644) 1 NC_002491.1 hypothetical protein 390644 ytgC 919119 ytgC Chlamydophila pneumoniae J138 hypothetical protein NP_300404.1 389298 R 138677 CDS NP_300405.1 15835881 919120 complement(390647..391426) 1 NC_002491.1 rRNA methylase 391426 ytgB_1 919120 ytgB_1 Chlamydophila pneumoniae J138 rRNA methylase NP_300405.1 390647 R 138677 CDS NP_300406.1 15835882 919121 complement(391410..392393) 1 NC_002491.1 solute-binding family protein 392393 ytgA 919121 ytgA Chlamydophila pneumoniae J138 solute-binding family protein NP_300406.1 391410 R 138677 CDS NP_300407.1 15835883 919123 392889..393395 1 NC_002491.1 hypothetical protein 393395 919123 CPj0350 Chlamydophila pneumoniae J138 hypothetical protein NP_300407.1 392889 D 138677 CDS NP_300408.1 15835884 919124 393596..395143 1 NC_002491.1 ADP/ATP translocase 395143 adt_1 919124 adt_1 Chlamydophila pneumoniae J138 ADP/ATP translocase NP_300408.1 393596 D 138677 CDS NP_300409.1 15835885 919125 395282..396541 1 NC_002491.1 hypothetical protein 396541 919125 CPj0352 Chlamydophila pneumoniae J138 hypothetical protein NP_300409.1 395282 D 138677 CDS NP_300410.1 15835886 919126 396601..396846 1 NC_002491.1 hypothetical protein 396846 919126 CPj0353 Chlamydophila pneumoniae J138 hypothetical protein NP_300410.1 396601 D 138677 CDS NP_300411.1 15835887 919127 396875..398218 1 NC_002491.1 hypothetical protein 398218 919127 CPj0354 Chlamydophila pneumoniae J138 hypothetical protein NP_300411.1 396875 D 138677 CDS NP_300412.1 15835888 919274 complement(398296..399597) 1 NC_002491.1 hypothetical protein 399597 919274 CPj0355 Chlamydophila pneumoniae J138 hypothetical protein NP_300412.1 398296 R 138677 CDS NP_300413.1 15835889 919128 complement(399815..400168) 1 NC_002491.1 hypothetical protein 400168 919128 CPj0356 Chlamydophila pneumoniae J138 hypothetical protein NP_300413.1 399815 R 138677 CDS NP_300414.1 15835890 919129 complement(400175..401026) 1 NC_002491.1 hypothetical protein 401026 919129 CPj0357 Chlamydophila pneumoniae J138 hypothetical protein NP_300414.1 400175 R 138677 CDS NP_300415.1 15835891 919862 complement(401284..401460) 1 NC_002491.1 hypothetical protein 401460 919862 CPj0358 Chlamydophila pneumoniae J138 hypothetical protein NP_300415.1 401284 R 138677 CDS NP_300416.1 15835892 919861 401721..403529 1 NC_002491.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 403529 lepA 919861 lepA Chlamydophila pneumoniae J138 GTP-binding protein LepA NP_300416.1 401721 D 138677 CDS NP_300417.1 15835893 919866 complement(403628..405067) 1 NC_002491.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 405067 gnd 919866 gnd Chlamydophila pneumoniae J138 6-phosphogluconate dehydrogenase NP_300417.1 403628 R 138677 CDS NP_300418.1 15835894 919130 complement(405088..406356) 1 NC_002491.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 406356 tyrS 919130 tyrS Chlamydophila pneumoniae J138 tyrosyl-tRNA synthetase NP_300418.1 405088 R 138677 CDS NP_300419.1 15835895 919288 complement(406761..407534) 1 NC_002491.1 expressed in response to temperature increase; may be involved in expression of genes involved in the developmental cycle of Chlamydia; RNA polymerase sigma factor sigma-28 407534 rpsD 919288 rpsD Chlamydophila pneumoniae J138 RNA polymerase sigma factor sigma-28 NP_300419.1 406761 R 138677 CDS NP_300420.1 15835896 919283 complement(407649..409397) 1 NC_002491.1 type III secretion system protein 409397 flhA 919283 flhA Chlamydophila pneumoniae J138 type III secretion system protein NP_300420.1 407649 R 138677 CDS NP_300421.1 15835897 919132 409675..409950 1 NC_002491.1 ferredoxin IV 409950 fer4 919132 fer4 Chlamydophila pneumoniae J138 ferredoxin IV NP_300421.1 409675 D 138677 CDS NP_300422.1 15835898 919844 410237..411256 1 NC_002491.1 hypothetical protein 411256 919844 CPj0365 Chlamydophila pneumoniae J138 hypothetical protein NP_300422.1 410237 D 138677 CDS NP_300423.1 15835899 919845 411685..412152 1 NC_002491.1 hypothetical protein 412152 919845 CPj0366 Chlamydophila pneumoniae J138 hypothetical protein NP_300423.1 411685 D 138677 CDS NP_300424.1 15835900 919872 412811..413548 1 NC_002491.1 hypothetical protein 413548 919872 CPj0367 Chlamydophila pneumoniae J138 hypothetical protein NP_300424.1 412811 D 138677 CDS NP_300425.1 15835901 919871 413499..413819 1 NC_002491.1 hypothetical protein 413819 919871 CPj0368 Chlamydophila pneumoniae J138 hypothetical protein NP_300425.1 413499 D 138677 CDS NP_300426.1 15835902 919869 414060..415274 1 NC_002491.1 hypothetical protein 415274 919869 CPj0369 Chlamydophila pneumoniae J138 hypothetical protein NP_300426.1 414060 D 138677 CDS NP_300427.1 15835903 919268 415509..416624 1 NC_002491.1 hypothetical protein 416624 919268 CPj0370 Chlamydophila pneumoniae J138 hypothetical protein NP_300427.1 415509 D 138677 CDS NP_300428.1 15835904 919265 416856..417215 1 NC_002491.1 hypothetical protein 417215 919265 CPj0371 Chlamydophila pneumoniae J138 hypothetical protein NP_300428.1 416856 D 138677 CDS NP_300429.1 15835905 919259 417396..417713 1 NC_002491.1 hypothetical protein 417713 919259 CPj0372 Chlamydophila pneumoniae J138 hypothetical protein NP_300429.1 417396 D 138677 CDS NP_300430.1 15835906 919262 418089..419930 1 NC_002491.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-clclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; these proteins appear to consist of duplicate domains as compared to Escherichia coli IspG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 419930 gcpE 919262 gcpE Chlamydophila pneumoniae J138 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase NP_300430.1 418089 D 138677 CDS NP_300431.1 15835907 919249 419927..420673 1 NC_002491.1 hypothetical protein 420673 919249 CPj0374 Chlamydophila pneumoniae J138 hypothetical protein NP_300431.1 419927 D 138677 CDS NP_300432.1 15835908 919246 420830..421327 1 NC_002491.1 hypothetical protein 421327 919246 CPj0375 Chlamydophila pneumoniae J138 hypothetical protein NP_300432.1 420830 D 138677 CDS NP_300433.1 15835909 919192 421563..422006 1 NC_002491.1 hypothetical protein 422006 919192 CPj0376 Chlamydophila pneumoniae J138 hypothetical protein NP_300433.1 421563 D 138677 CDS NP_300434.1 15835910 919191 complement(422053..423147) 1 NC_002491.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 423147 sucB_1 919191 sucB_1 Chlamydophila pneumoniae J138 dihydrolipoamide succinyltransferase NP_300434.1 422053 R 138677 CDS NP_300435.1 15835911 919185 complement(423151..425877) 1 NC_002491.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 425877 sucA 919185 sucA Chlamydophila pneumoniae J138 2-oxoglutarate dehydrogenase E1 NP_300435.1 423151 R 138677 CDS NP_300436.1 15835912 919740 426031..426477 1 NC_002491.1 hypothetical protein 426477 919740 CPj0379 Chlamydophila pneumoniae J138 hypothetical protein NP_300436.1 426031 D 138677 CDS NP_300437.1 15835913 919729 426467..427588 1 NC_002491.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 427588 hemN_1 919729 hemN_1 Chlamydophila pneumoniae J138 coproporphyrinogen III oxidase NP_300437.1 426467 D 138677 CDS NP_300438.1 15835914 919198 complement(427743..429518) 1 NC_002491.1 hypothetical protein 429518 919198 CPj0381 Chlamydophila pneumoniae J138 hypothetical protein NP_300438.1 427743 R 138677 CDS NP_300439.1 15835915 919205 complement(429742..430458) 1 NC_002491.1 SAM-dependent methytransferase 430458 yabC_1 919205 yabC_1 Chlamydophila pneumoniae J138 SAM-dependent methytransferase NP_300439.1 429742 R 138677 CDS NP_300440.1 15835916 919202 complement(430455..431402) 1 NC_002491.1 hypothetical protein 431402 919202 CPj0383 Chlamydophila pneumoniae J138 hypothetical protein NP_300440.1 430455 R 138677 CDS NP_300441.1 15835917 919233 complement(431568..432086) 1 NC_002491.1 histone-like protein 2 432086 hctB 919233 hctB Chlamydophila pneumoniae J138 histone-like protein 2 NP_300441.1 431568 R 138677 CDS NP_300442.1 15835918 919228 complement(432228..433727) 1 NC_002491.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 433727 pepA 919228 pepA Chlamydophila pneumoniae J138 leucyl aminopeptidase NP_300442.1 432228 R 138677 CDS NP_300443.1 15835919 919225 complement(433752..434234) 1 NC_002491.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 434234 ssb 919225 ssb Chlamydophila pneumoniae J138 single-stranded DNA-binding protein NP_300443.1 433752 R 138677 CDS NP_300444.1 15835920 919222 complement(434405..434905) 1 NC_002491.1 hypothetical protein 434905 919222 CPj0387 Chlamydophila pneumoniae J138 hypothetical protein NP_300444.1 434405 R 138677 CDS NP_300445.1 15835921 919236 435038..437032 1 NC_002491.1 debranching; glycogen hydrolase 437032 glgX 919236 glgX Chlamydophila pneumoniae J138 glycogen hydrolase NP_300445.1 435038 D 138677 CDS NP_300446.1 15835922 919213 complement(437025..437843) 1 NC_002491.1 hypothetical protein 437843 919213 CPj0389 Chlamydophila pneumoniae J138 hypothetical protein NP_300446.1 437025 R 138677 CDS NP_300447.1 15835923 919210 complement(437840..438853) 1 NC_002491.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 438853 ruvB 919210 ruvB Chlamydophila pneumoniae J138 Holliday junction DNA helicase RuvB NP_300447.1 437840 R 138677 CDS NP_300448.1 15835924 919242 complement(439216..439401) 1 NC_002491.1 hypothetical protein 439401 919242 CPj0391 Chlamydophila pneumoniae J138 hypothetical protein NP_300448.1 439216 R 138677 CDS NP_300449.1 15835925 919239 439523..440095 1 NC_002491.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 440095 dcd 919239 dcd Chlamydophila pneumoniae J138 deoxycytidine triphosphate deaminase NP_300449.1 439523 D 138677 CDS NP_300450.1 15835926 919134 440088..440435 1 NC_002491.1 hypothetical protein 440435 919134 CPj0393 Chlamydophila pneumoniae J138 hypothetical protein NP_300450.1 440088 D 138677 CDS NP_300451.1 15835927 919133 440445..441680 1 NC_002491.1 hemolysin homolog; hypothetical protein 441680 tlyC_1 919133 tlyC_1 Chlamydophila pneumoniae J138 hypothetical protein NP_300451.1 440445 D 138677 CDS NP_300452.1 15835928 919122 441673..442887 1 NC_002491.1 hypothetical protein 442887 919122 CPj0395 Chlamydophila pneumoniae J138 hypothetical protein NP_300452.1 441673 D 138677 CDS NP_300453.1 15835929 919138 complement(442947..444062) 1 NC_002491.1 NifS-related aminotransferase 444062 yhfO 919138 yhfO Chlamydophila pneumoniae J138 NifS-related aminotransferase NP_300453.1 442947 R 138677 CDS NP_300454.1 15835930 919137 complement(444087..444824) 1 NC_002491.1 PP2C phosphatase 444824 919137 CPj0397 Chlamydophila pneumoniae J138 PP2C phosphatase NP_300454.1 444087 R 138677 CDS NP_300455.1 15835931 919136 445242..445412 1 NC_002491.1 hypothetical protein 445412 919136 CPj0398 Chlamydophila pneumoniae J138 hypothetical protein NP_300455.1 445242 D 138677 CDS NP_300456.1 15835932 919135 445588..446235 1 NC_002491.1 hypothetical protein 446235 919135 CPj0399 Chlamydophila pneumoniae J138 hypothetical protein NP_300456.1 445588 D 138677 CDS NP_300457.1 15835933 919143 446245..447018 1 NC_002491.1 hypothetical protein 447018 919143 CPj0400 Chlamydophila pneumoniae J138 hypothetical protein NP_300457.1 446245 D 138677 CDS NP_300458.1 15835934 919142 complement(447201..447593) 1 NC_002491.1 hypothetical protein 447593 919142 CPj0401 Chlamydophila pneumoniae J138 hypothetical protein NP_300458.1 447201 R 138677 CDS NP_300459.1 15835935 919141 complement(447594..448703) 1 NC_002491.1 adenine glycosylase 448703 mutY 919141 mutY Chlamydophila pneumoniae J138 adenine glycosylase NP_300459.1 447594 R 138677 CDS NP_300460.1 15835936 919140 448724..449422 1 NC_002491.1 pseudouridine synthase 449422 yceC 919140 yceC Chlamydophila pneumoniae J138 pseudouridine synthase NP_300460.1 448724 D 138677 CDS NP_300461.1 15835937 919139 complement(449577..450596) 1 NC_002491.1 hypothetical protein 450596 919139 CPj0404 Chlamydophila pneumoniae J138 hypothetical protein NP_300461.1 449577 R 138677 CDS NP_300462.1 15835938 919147 complement(450672..451448) 1 NC_002491.1 hypothetical protein 451448 919147 CPj0405 Chlamydophila pneumoniae J138 hypothetical protein NP_300462.1 450672 R 138677 CDS NP_300463.1 15835939 919146 451678..452577 1 NC_002491.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 452577 fabI 919146 fabI Chlamydophila pneumoniae J138 enoyl-ACP reductase NP_300463.1 451678 D 138677 CDS NP_300464.1 15835940 919145 complement(452564..453451) 1 NC_002491.1 HAD family phosphatase 453451 919145 CPj0407 Chlamydophila pneumoniae J138 HAD family phosphatase NP_300464.1 452564 R 138677 CDS NP_300465.1 15835941 919144 453814..454293 1 NC_002491.1 hypothetical protein 454293 919144 CPj0408 Chlamydophila pneumoniae J138 hypothetical protein NP_300465.1 453814 D 138677 CDS NP_300466.1 15835942 919151 454354..454839 1 NC_002491.1 hypothetical protein 454839 919151 CPj0409 Chlamydophila pneumoniae J138 hypothetical protein NP_300466.1 454354 D 138677 CDS NP_300467.1 15835943 919150 454832..455545 1 NC_002491.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 455545 dnaQ_1 919150 dnaQ_1 Chlamydophila pneumoniae J138 DNA polymerase III subunit epsilon NP_300467.1 454832 D 138677 CDS NP_300468.1 15835944 919149 455542..456321 1 NC_002491.1 hypothetical protein 456321 919149 CPj0411 Chlamydophila pneumoniae J138 hypothetical protein NP_300468.1 455542 D 138677 CDS NP_300469.1 15835945 919148 456299..456958 1 NC_002491.1 hypothetical protein 456958 919148 CPj0412 Chlamydophila pneumoniae J138 hypothetical protein NP_300469.1 456299 D 138677 CDS NP_300470.1 15835946 919156 complement(456933..458912) 1 NC_002491.1 ABC transporter ATP-binding protein 458912 msbA 919156 msbA Chlamydophila pneumoniae J138 ABC transporter ATP-binding protein NP_300470.1 456933 R 138677 CDS NP_300471.1 15835947 919155 complement(458878..459852) 1 NC_002491.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 459852 accA 919155 accA Chlamydophila pneumoniae J138 acetyl-CoA carboxylase carboxyltransferase subunit alpha NP_300471.1 458878 R 138677 CDS NP_300472.1 15835948 919154 complement(459927..461207) 1 NC_002491.1 hypothetical protein 461207 919154 CPj0415 Chlamydophila pneumoniae J138 hypothetical protein NP_300472.1 459927 R 138677 CDS NP_300473.1 15835949 919153 complement(461263..461565) 1 NC_002491.1 integration host factor alpha 461565 himD 919153 himD Chlamydophila pneumoniae J138 integration host factor alpha NP_300473.1 461263 R 138677 CDS NP_300474.1 15835950 919162 complement(461950..462744) 1 NC_002491.1 N-acetylmuramoyl alanine amidase 462744 amiA 919162 amiA Chlamydophila pneumoniae J138 N-acetylmuramoyl alanine amidase NP_300474.1 461950 R 138677 CDS NP_300475.1 15835951 919161 complement(462659..464110) 1 NC_002491.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 464110 murE 919161 murE Chlamydophila pneumoniae J138 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase NP_300475.1 462659 R 138677 CDS NP_300476.1 15835952 919160 complement(464583..466544) 1 NC_002491.1 transglycosylase/transpeptidase 466544 pbp3 919160 pbp3 Chlamydophila pneumoniae J138 transglycosylase/transpeptidase NP_300476.1 464583 R 138677 CDS NP_300477.1 15835953 919159 complement(466531..466818) 1 NC_002491.1 hypothetical protein 466818 919159 CPj0420 Chlamydophila pneumoniae J138 hypothetical protein NP_300477.1 466531 R 138677 CDS NP_300478.1 15835954 919158 complement(466815..467708) 1 NC_002491.1 S-adenosyl-methyltransferase MraW 467708 mraW 919158 mraW Chlamydophila pneumoniae J138 S-adenosyl-methyltransferase MraW NP_300478.1 466815 R 138677 CDS NP_300479.1 15835955 919157 467952..468497 1 NC_002491.1 hypothetical protein 468497 919157 CPj0422 Chlamydophila pneumoniae J138 hypothetical protein NP_300479.1 467952 D 138677 CDS NP_300480.1 15835956 919865 468501..468929 1 NC_002491.1 hypothetical protein 468929 919865 CPj0423 Chlamydophila pneumoniae J138 hypothetical protein NP_300480.1 468501 D 138677 CDS NP_300481.1 15835957 919867 469322..470674 1 NC_002491.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosome replication initiator DnaA 470674 dnaA 919867 dnaA Chlamydophila pneumoniae J138 chromosome replication initiator DnaA NP_300481.1 469322 D 138677 CDS NP_300482.1 15835958 919848 470690..471277 1 NC_002491.1 hypothetical protein 471277 919848 CPj0425 Chlamydophila pneumoniae J138 hypothetical protein NP_300482.1 470690 D 138677 CDS NP_300483.1 15835959 919167 complement(471243..471821) 1 NC_002491.1 hypothetical protein 471821 919167 CPj0426 Chlamydophila pneumoniae J138 hypothetical protein NP_300483.1 471243 R 138677 CDS NP_300484.1 15835960 919427 471917..473428 1 NC_002491.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 473428 nqr2 919427 nqr2 Chlamydophila pneumoniae J138 Na(+)-translocating NADH-quinone reductase subunit B NP_300484.1 471917 D 138677 CDS NP_300485.1 15835961 919168 473432..474394 1 NC_002491.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 474394 nqr3 919168 nqr3 Chlamydophila pneumoniae J138 Na(+)-translocating NADH-quinone reductase subunit C NP_300485.1 473432 D 138677 CDS NP_300486.1 15835962 919166 474391..475032 1 NC_002491.1 Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D 475032 nqr4 919166 nqr4 Chlamydophila pneumoniae J138 Na(+)-translocating NADH-quinone reductase subunit D NP_300486.1 474391 D 138677 CDS NP_300487.1 15835963 919165 475036..475806 1 NC_002491.1 Na(+)-translocating NADH-quinone reductase subunit E 475806 nqr5 919165 nqr5 Chlamydophila pneumoniae J138 Na(+)-translocating NADH-quinone reductase subunit E NP_300487.1 475036 D 138677 CDS NP_300488.1 15835964 919164 complement(475858..476193) 1 NC_002491.1 hypothetical protein 476193 919164 CPj0431 Chlamydophila pneumoniae J138 hypothetical protein NP_300488.1 475858 R 138677 CDS NP_300489.1 15835965 919163 complement(476221..476526) 1 NC_002491.1 hypothetical protein 476526 919163 CPj0432 Chlamydophila pneumoniae J138 hypothetical protein NP_300489.1 476221 R 138677 CDS NP_300490.1 15835966 919169 complement(476636..476983) 1 NC_002491.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 476983 gcsH 919169 gcsH Chlamydophila pneumoniae J138 glycine cleavage system protein H NP_300490.1 476636 R 138677 CDS NP_300491.1 15835967 919855 complement(476983..479172) 1 NC_002491.1 hypothetical protein 479172 919855 CPj0434 Chlamydophila pneumoniae J138 hypothetical protein NP_300491.1 476983 R 138677 CDS NP_300492.1 15835968 919852 complement(479182..480612) 1 NC_002491.1 phospholipase D 480612 919852 CPj0435 Chlamydophila pneumoniae J138 phospholipase D NP_300492.1 479182 R 138677 CDS NP_300493.1 15835969 919725 complement(480609..481328) 1 NC_002491.1 lipoate protein ligase-like protein 481328 lplA_1 919725 lplA_1 Chlamydophila pneumoniae J138 lipoate protein ligase-like protein NP_300493.1 480609 R 138677 CDS NP_300494.1 15835970 919174 481526..484063 1 NC_002491.1 ClpC protease 484063 clpC 919174 clpC Chlamydophila pneumoniae J138 ClpC protease NP_300494.1 481526 D 138677 CDS NP_300495.1 15835971 919172 complement(484041..485126) 1 NC_002491.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 485126 mnmA 919172 mnmA Chlamydophila pneumoniae J138 tRNA-specific 2-thiouridylase MnmA NP_300495.1 484041 R 138677 CDS NP_300496.1 15835972 919171 485263..485790 1 NC_002491.1 hypothetical protein 485790 919171 CPj0439 Chlamydophila pneumoniae J138 hypothetical protein NP_300496.1 485263 D 138677 CDS NP_300497.1 15835973 919170 485815..486453 1 NC_002491.1 hypothetical protein 486453 919170 CPj0440 Chlamydophila pneumoniae J138 hypothetical protein NP_300497.1 485815 D 138677 CDS NP_300498.1 15835974 919179 486601..487551 1 NC_002491.1 hypothetical protein 487551 919179 CPj0441 Chlamydophila pneumoniae J138 hypothetical protein NP_300498.1 486601 D 138677 CDS NP_300499.1 15835975 919178 487723..488241 1 NC_002491.1 hypothetical protein 488241 919178 CPj0442 Chlamydophila pneumoniae J138 hypothetical protein NP_300499.1 487723 D 138677 CDS NP_300500.1 15835976 919177 488439..489692 1 NC_002491.1 hypothetical protein 489692 919177 CPj0443 Chlamydophila pneumoniae J138 hypothetical protein NP_300500.1 488439 D 138677 CDS NP_300501.1 15835977 919176 489997..493827 1 NC_002491.1 hypothetical protein 493827 pmp_6 919176 pmp_6 Chlamydophila pneumoniae J138 hypothetical protein NP_300501.1 489997 D 138677 CDS NP_300502.1 15835978 919175 494089..496899 1 NC_002491.1 hypothetical protein 496899 pmp_7 919175 pmp_7 Chlamydophila pneumoniae J138 hypothetical protein NP_300502.1 494089 D 138677 CDS NP_300503.1 15835979 919173 496943..499735 1 NC_002491.1 hypothetical protein 499735 pmp_8 919173 pmp_8 Chlamydophila pneumoniae J138 hypothetical protein NP_300503.1 496943 D 138677 CDS NP_300504.1 15835980 919184 499885..502671 1 NC_002491.1 hypothetical protein 502671 pmp_9 919184 pmp_9 Chlamydophila pneumoniae J138 hypothetical protein NP_300504.1 499885 D 138677 CDS NP_300505.1 15835981 919182 complement(503012..504127) 1 NC_002491.1 hypothetical protein 504127 yxjG_2 919182 yxjG_2 Chlamydophila pneumoniae J138 hypothetical protein NP_300505.1 503012 R 138677 CDS NP_300506.1 15835982 919183 complement(504644..507430) 1 NC_002491.1 hypothetical protein 507430 pmp_10 919183 pmp_10 Chlamydophila pneumoniae J138 hypothetical protein NP_300506.1 504644 R 138677 CDS NP_300507.1 15835983 919180 507593..510379 1 NC_002491.1 hypothetical protein 510379 pmp_11 919180 pmp_11 Chlamydophila pneumoniae J138 hypothetical protein NP_300507.1 507593 D 138677 CDS NP_300508.1 15835984 919181 510637..512181 1 NC_002491.1 hypothetical protein 512181 pmp_12 919181 pmp_12 Chlamydophila pneumoniae J138 hypothetical protein NP_300508.1 510637 D 138677 CDS NP_300509.1 15835985 919193 512552..515473 1 NC_002491.1 hypothetical protein 515473 pmp_13 919193 pmp_13 Chlamydophila pneumoniae J138 hypothetical protein NP_300509.1 512552 D 138677 CDS NP_300510.1 15835986 919190 515500..518436 1 NC_002491.1 hypothetical protein 518436 pmp_14 919190 pmp_14 Chlamydophila pneumoniae J138 hypothetical protein NP_300510.1 515500 D 138677 CDS NP_300511.1 15835987 919188 complement(518773..520851) 1 NC_002491.1 hypothetical protein 520851 919188 CPj0456 Chlamydophila pneumoniae J138 hypothetical protein NP_300511.1 518773 R 138677 CDS NP_300512.1 15835988 919189 complement(521295..523184) 1 NC_002491.1 hypothetical protein 523184 919189 CPj0457 Chlamydophila pneumoniae J138 hypothetical protein NP_300512.1 521295 R 138677 CDS NP_300513.1 15835989 919186 complement(523552..525639) 1 NC_002491.1 hypothetical protein 525639 919186 CPj0458 Chlamydophila pneumoniae J138 hypothetical protein NP_300513.1 523552 R 138677 CDS NP_300514.1 15835990 919187 complement(525935..526324) 1 NC_002491.1 hypothetical protein 526324 919187 CPj0459 Chlamydophila pneumoniae J138 hypothetical protein NP_300514.1 525935 R 138677 CDS NP_300515.1 15835991 919200 complement(526308..527159) 1 NC_002491.1 hypothetical protein 527159 919200 CPj0460 Chlamydophila pneumoniae J138 hypothetical protein NP_300515.1 526308 R 138677 CDS NP_300516.1 15835992 919199 complement(527160..527957) 1 NC_002491.1 hypothetical protein 527957 919199 CPj0461 Chlamydophila pneumoniae J138 hypothetical protein NP_300516.1 527160 R 138677 CDS NP_300517.1 15835993 919197 complement(528353..530371) 1 NC_002491.1 hypothetical protein 530371 919197 CPj0462 Chlamydophila pneumoniae J138 hypothetical protein NP_300517.1 528353 R 138677 CDS NP_300518.1 15835994 919194 complement(530507..531676) 1 NC_002491.1 hypothetical protein 531676 919194 CPj0463 Chlamydophila pneumoniae J138 hypothetical protein NP_300518.1 530507 R 138677 CDS NP_300519.1 15835995 919195 complement(531682..532161) 1 NC_002491.1 hypothetical protein 532161 919195 CPj0464 Chlamydophila pneumoniae J138 hypothetical protein NP_300519.1 531682 R 138677 CDS NP_300520.1 15835996 919204 complement(532187..532531) 1 NC_002491.1 hypothetical protein 532531 919204 CPj0465 Chlamydophila pneumoniae J138 hypothetical protein NP_300520.1 532187 R 138677 CDS NP_300521.1 15835997 919203 533043..535859 1 NC_002491.1 hypothetical protein 535859 pmp_15 919203 pmp_15 Chlamydophila pneumoniae J138 hypothetical protein NP_300521.1 533043 D 138677 CDS NP_300522.1 15835998 919201 535952..538756 1 NC_002491.1 hypothetical protein 538756 pmp_16 919201 pmp_16 Chlamydophila pneumoniae J138 hypothetical protein NP_300522.1 535952 D 138677 CDS NP_300523.1 15835999 919849 538951..539754 1 NC_002491.1 hypothetical protein 539754 pmp_17.1 919849 pmp_17.1 Chlamydophila pneumoniae J138 hypothetical protein NP_300523.1 538951 D 138677 CDS NP_300524.1 15836000 919212 539739..540782 1 NC_002491.1 frame-shift with pmp_17.1; hypothetical protein 540782 pmp_17.2 919212 pmp_17.2 Chlamydophila pneumoniae J138 hypothetical protein NP_300524.1 539739 D 138677 CDS NP_300525.1 15836001 919211 540676..541854 1 NC_002491.1 Frame-shift with pmp_17.2; hypothetical protein 541854 pmp_17.3 919211 pmp_17.3 Chlamydophila pneumoniae J138 hypothetical protein NP_300525.1 540676 D 138677 CDS NP_300526.1 15836002 919209 541883..544723 1 NC_002491.1 hypothetical protein 544723 pmp_18 919209 pmp_18 Chlamydophila pneumoniae J138 hypothetical protein NP_300526.1 541883 D 138677 CDS NP_300527.1 15836003 919208 complement(544897..547224) 1 NC_002491.1 hypothetical protein 547224 919208 CPj0472 Chlamydophila pneumoniae J138 hypothetical protein NP_300527.1 544897 R 138677 CDS NP_300528.1 15836004 919207 complement(547386..548912) 1 NC_002491.1 hypothetical protein 548912 919207 CPj0473 Chlamydophila pneumoniae J138 hypothetical protein NP_300528.1 547386 R 138677 CDS NP_300529.1 15836005 919206 complement(549123..550892) 1 NC_002491.1 hypothetical protein 550892 919206 CPj0474 Chlamydophila pneumoniae J138 hypothetical protein NP_300529.1 549123 R 138677 CDS NP_300530.1 15836006 919217 complement(551001..553163) 1 NC_002491.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 553163 glgB 919217 glgB Chlamydophila pneumoniae J138 glycogen branching protein NP_300530.1 551001 R 138677 CDS NP_300531.1 15836007 919216 complement(553174..554163) 1 NC_002491.1 hypothetical protein 554163 919216 CPj0476 Chlamydophila pneumoniae J138 hypothetical protein NP_300531.1 553174 R 138677 CDS NP_300532.1 15836008 919215 complement(554160..555425) 1 NC_002491.1 hypothetical protein 555425 yqeV 919215 yqeV Chlamydophila pneumoniae J138 hypothetical protein NP_300532.1 554160 R 138677 CDS NP_300533.1 15836009 919214 complement(555526..556944) 1 NC_002491.1 GTP binding protein 556944 hflX 919214 hflX Chlamydophila pneumoniae J138 GTP binding protein NP_300533.1 555526 R 138677 CDS NP_300534.1 15836010 919221 complement(556932..557744) 1 NC_002491.1 metal dependent hydrolase 557744 phnP 919221 phnP Chlamydophila pneumoniae J138 metal dependent hydrolase NP_300534.1 556932 R 138677 CDS NP_300535.1 15836011 919220 complement(557966..558622) 1 NC_002491.1 hypothetical protein 558622 919220 CPj0480 Chlamydophila pneumoniae J138 hypothetical protein NP_300535.1 557966 R 138677 CDS NP_300536.1 15836012 919219 complement(558655..560265) 1 NC_002491.1 hypothetical protein 560265 919219 CPj0481 Chlamydophila pneumoniae J138 hypothetical protein NP_300536.1 558655 R 138677 CDS NP_300537.1 15836013 919218 complement(560277..561056) 1 NC_002491.1 arginine periplasmic binding protein 561056 artJ 919218 artJ Chlamydophila pneumoniae J138 arginine periplasmic binding protein NP_300537.1 560277 R 138677 CDS NP_300538.1 15836014 919227 561155..564286 1 NC_002491.1 hypothetical protein 564286 919227 CPj0483 Chlamydophila pneumoniae J138 hypothetical protein NP_300538.1 561155 D 138677 CDS NP_300539.1 15836015 919226 564289..565146 1 NC_002491.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase 565146 aroG 919226 aroG Chlamydophila pneumoniae J138 3-deoxy-7-phosphoheptulonate synthase NP_300539.1 564289 D 138677 CDS NP_300540.1 15836016 919224 565357..565551 1 NC_002491.1 hypothetical protein 565551 919224 CPj0485 Chlamydophila pneumoniae J138 hypothetical protein NP_300540.1 565357 D 138677 CDS NP_300541.1 15836017 919223 complement(565721..567103) 1 NC_002491.1 hypothetical protein 567103 919223 CPj0486 Chlamydophila pneumoniae J138 hypothetical protein NP_300541.1 565721 R 138677 CDS NP_300542.1 15836018 919235 complement(567428..569059) 1 NC_002491.1 hypothetical protein 569059 919235 CPj0487 Chlamydophila pneumoniae J138 hypothetical protein NP_300542.1 567428 R 138677 CDS NP_300543.1 15836019 919234 complement(569083..569415) 1 NC_002491.1 HIT family hydrolase 569415 ycfF 919234 ycfF Chlamydophila pneumoniae J138 HIT family hydrolase NP_300543.1 569083 R 138677 CDS NP_300544.1 15836020 919232 complement(569412..570284) 1 NC_002491.1 hypothetical protein 570284 919232 CPj0489 Chlamydophila pneumoniae J138 hypothetical protein NP_300544.1 569412 R 138677 CDS NP_300545.1 15836021 919231 570598..572655 1 NC_002491.1 hypothetical protein 572655 919231 CPj0490 Chlamydophila pneumoniae J138 hypothetical protein NP_300545.1 570598 D 138677 CDS NP_300546.1 15836022 919229 complement(572652..573671) 1 NC_002491.1 hypothetical protein 573671 919229 CPj0491 Chlamydophila pneumoniae J138 hypothetical protein NP_300546.1 572652 R 138677 CDS NP_300547.1 15836023 919241 573971..574126 1 NC_002491.1 hypothetical protein 574126 919241 CPj0492 Chlamydophila pneumoniae J138 hypothetical protein NP_300547.1 573971 D 138677 CDS NP_300548.1 15836024 919240 complement(574171..574323) 1 NC_002491.1 hypothetical protein 574323 919240 CPj0493 Chlamydophila pneumoniae J138 hypothetical protein NP_300548.1 574171 R 138677 CDS NP_300549.1 15836025 919238 complement(574462..574683) 1 NC_002491.1 hypothetical protein 574683 919238 CPj0494 Chlamydophila pneumoniae J138 hypothetical protein NP_300549.1 574462 R 138677 CDS NP_300550.1 15836026 919237 574922..576115 1 NC_002491.1 catalyzes the interconversion of tetrahydrodipicolinate and L,L-diaminopimelate in lysine biosynthesis; L,L-diaminopimelate aminotransferase 576115 aspC 919237 aspC Chlamydophila pneumoniae J138 L,L-diaminopimelate aminotransferase NP_300550.1 574922 D 138677 CDS NP_300551.1 15836027 919248 576112..577134 1 NC_002491.1 hypothetical protein 577134 919248 CPj0496 Chlamydophila pneumoniae J138 hypothetical protein NP_300551.1 576112 D 138677 CDS NP_300552.1 15836028 919247 complement(577136..577408) 1 NC_002491.1 hypothetical protein 577408 919247 CPj0497 Chlamydophila pneumoniae J138 hypothetical protein NP_300552.1 577136 R 138677 CDS NP_300553.1 15836029 919245 complement(577401..578354) 1 NC_002491.1 hypothetical protein 578354 919245 CPj0498 Chlamydophila pneumoniae J138 hypothetical protein NP_300553.1 577401 R 138677 CDS NP_300554.1 15836030 919244 complement(578522..579679) 1 NC_002491.1 hypothetical protein 579679 919244 CPj0499 Chlamydophila pneumoniae J138 hypothetical protein NP_300554.1 578522 R 138677 CDS NP_300555.1 15836031 919243 579979..581685 1 NC_002491.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 581685 proS 919243 proS Chlamydophila pneumoniae J138 prolyl-tRNA synthetase NP_300555.1 579979 D 138677 CDS NP_300556.1 15836032 919255 581777..582973 1 NC_002491.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 582973 hrcA 919255 hrcA Chlamydophila pneumoniae J138 heat-inducible transcription repressor NP_300556.1 581777 D 138677 CDS NP_300557.1 15836033 919254 582970..583524 1 NC_002491.1 HSP-70 cofactor 583524 grpE 919254 grpE Chlamydophila pneumoniae J138 HSP-70 cofactor NP_300557.1 582970 D 138677 CDS NP_300558.1 15836034 919252 583554..585536 1 NC_002491.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 585536 dnaK 919252 dnaK Chlamydophila pneumoniae J138 molecular chaperone DnaK NP_300558.1 583554 D 138677 CDS NP_300559.1 15836035 919251 585807..587837 1 NC_002491.1 ribonuclease 587837 vacB 919251 vacB Chlamydophila pneumoniae J138 ribonuclease NP_300559.1 585807 D 138677 CDS NP_300560.1 15836036 919250 587839..588429 1 NC_002491.1 3-methyladenine DNA glycosylase 588429 919250 CPj0505 Chlamydophila pneumoniae J138 3-methyladenine DNA glycosylase NP_300560.1 587839 D 138677 CDS NP_300561.1 15836037 919261 588492..589163 1 NC_002491.1 hypothetical protein 589163 919261 CPj0506 Chlamydophila pneumoniae J138 hypothetical protein NP_300561.1 588492 D 138677 CDS NP_300562.1 15836038 919260 589281..589445 1 NC_002491.1 hypothetical protein 589445 919260 CPj0507 Chlamydophila pneumoniae J138 hypothetical protein NP_300562.1 589281 D 138677 CDS NP_300563.1 15836039 919258 589462..589623 1 NC_002491.1 hypothetical protein 589623 919258 CPj0508 Chlamydophila pneumoniae J138 hypothetical protein NP_300563.1 589462 D 138677 CDS NP_300564.1 15836040 919257 589655..590131 1 NC_002491.1 metalloprotein 590131 919257 CPj0509 Chlamydophila pneumoniae J138 metalloprotein NP_300564.1 589655 D 138677 CDS NP_300565.1 15836041 919256 590133..591296 1 NC_002491.1 hypothetical protein 591296 tlyC_2 919256 tlyC_2 Chlamydophila pneumoniae J138 hypothetical protein NP_300565.1 590133 D 138677 CDS NP_300566.1 15836042 919267 591461..591811 1 NC_002491.1 sigma regulatory factor 591811 rsbV_1 919267 rsbV_1 Chlamydophila pneumoniae J138 sigma regulatory factor NP_300566.1 591461 D 138677 CDS NP_300567.1 15836043 919266 591873..593735 1 NC_002491.1 hypothetical protein 593735 919266 CPj0512 Chlamydophila pneumoniae J138 hypothetical protein NP_300567.1 591873 D 138677 CDS NP_300568.1 15836044 919264 593967..595076 1 NC_002491.1 hypothetical protein 595076 919264 CPj0513 Chlamydophila pneumoniae J138 hypothetical protein NP_300568.1 593967 D 138677 CDS NP_300569.1 15836045 919263 595049..595843 1 NC_002491.1 hypothetical protein 595843 919263 CPj0514 Chlamydophila pneumoniae J138 hypothetical protein NP_300569.1 595049 D 138677 CDS NP_300570.2 161353804 919272 595791..596504 1 NC_002491.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 596504 ubiE 919272 ubiE Chlamydophila pneumoniae J138 ubiquinone/menaquinone biosynthesis methyltransferase NP_300570.2 595791 D 138677 CDS NP_300571.1 15836047 919271 complement(596572..598134) 1 NC_002491.1 hypothetical protein 598134 919271 CPj0516 Chlamydophila pneumoniae J138 hypothetical protein NP_300571.1 596572 R 138677 CDS NP_300572.1 15836048 919270 complement(598112..598951) 1 NC_002491.1 hypothetical protein 598951 919270 CPj0517 Chlamydophila pneumoniae J138 hypothetical protein NP_300572.1 598112 R 138677 CDS NP_300573.1 15836049 919269 complement(599149..600123) 1 NC_002491.1 hypothetical protein 600123 919269 CPj0518 Chlamydophila pneumoniae J138 hypothetical protein NP_300573.1 599149 R 138677 CDS NP_300574.1 15836050 919276 complement(600221..600994) 1 NC_002491.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 600994 dapF 919276 dapF Chlamydophila pneumoniae J138 diaminopimelate epimerase NP_300574.1 600221 R 138677 CDS NP_300575.1 15836051 919275 complement(600963..601538) 1 NC_002491.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 601538 clpP_1 919275 clpP_1 Chlamydophila pneumoniae J138 ATP-dependent Clp protease proteolytic subunit NP_300575.1 600963 R 138677 CDS NP_300576.1 15836052 919273 complement(601558..603117) 1 NC_002491.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 603117 glyA 919273 glyA Chlamydophila pneumoniae J138 serine hydroxymethyltransferase NP_300576.1 601558 R 138677 CDS NP_300577.1 15836053 919282 603307..603978 1 NC_002491.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 603978 hemD 919282 hemD Chlamydophila pneumoniae J138 uroporphyrinogen-III synthase NP_300577.1 603307 D 138677 CDS NP_300578.1 15836054 919281 604043..604375 1 NC_002491.1 hypothetical protein 604375 919281 CPj0523 Chlamydophila pneumoniae J138 hypothetical protein NP_300578.1 604043 D 138677 CDS NP_300579.1 15836055 919280 604423..605502 1 NC_002491.1 hypothetical protein 605502 919280 CPj0524 Chlamydophila pneumoniae J138 hypothetical protein NP_300579.1 604423 D 138677 CDS NP_300580.1 15836056 919279 605842..606606 1 NC_002491.1 hypothetical protein 606606 919279 CPj0525 Chlamydophila pneumoniae J138 hypothetical protein NP_300580.1 605842 D 138677 CDS NP_300581.1 15836057 919278 complement(607027..608016) 1 NC_002491.1 GutQ/KpsF family sugar-P isomerase 608016 kpsF 919278 kpsF Chlamydophila pneumoniae J138 GutQ/KpsF family sugar-P isomerase NP_300581.1 607027 R 138677 CDS NP_300582.1 15836058 919277 complement(608043..609224) 1 NC_002491.1 Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA; branched-chain alpha-keto acid dehydrogenase subunit E2 609224 sucB_2 919277 sucB_2 Chlamydophila pneumoniae J138 branched-chain alpha-keto acid dehydrogenase subunit E2 NP_300582.1 608043 R 138677 CDS NP_300583.1 15836059 919290 complement(609238..610482) 1 NC_002491.1 glutamate symporter 610482 gltT 919290 gltT Chlamydophila pneumoniae J138 glutamate symporter NP_300583.1 609238 R 138677 CDS NP_300584.1 15836060 919289 complement(610482..611579) 1 NC_002491.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 611579 lpxK 919289 lpxK Chlamydophila pneumoniae J138 tetraacyldisaccharide 4'-kinase NP_300584.1 610482 R 138677 CDS NP_300585.1 15836061 919286 complement(611777..612574) 1 NC_002491.1 rRNA methylase 612574 spoU_1 919286 spoU_1 Chlamydophila pneumoniae J138 rRNA methylase NP_300585.1 611777 R 138677 CDS NP_300586.1 15836062 919285 complement(612562..613389) 1 NC_002491.1 SAM dependent methyltransferase 613389 919285 CPj0531 Chlamydophila pneumoniae J138 SAM dependent methyltransferase NP_300586.1 612562 R 138677 CDS NP_300587.1 15836063 919295 complement(613392..613994) 1 NC_002491.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 613994 ribC 919295 ribC Chlamydophila pneumoniae J138 riboflavin synthase subunit alpha NP_300587.1 613392 R 138677 CDS NP_300588.1 15836064 919294 614250..614708 1 NC_002491.1 NrdR family transcriptional regulator 614708 nrdR 919294 nrdR Chlamydophila pneumoniae J138 NrdR family transcriptional regulator NP_300588.1 614250 D 138677 CDS NP_300589.1 15836065 919293 614733..615107 1 NC_002491.1 DnaK suppressor 615107 dksA 919293 dksA Chlamydophila pneumoniae J138 DnaK suppressor NP_300589.1 614733 D 138677 CDS NP_300590.1 15836066 919291 615113..615619 1 NC_002491.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 615619 lspA 919291 lspA Chlamydophila pneumoniae J138 lipoprotein signal peptidase NP_300590.1 615113 D 138677 CDS NP_300591.1 15836067 919292 615665..617014 1 NC_002491.1 D-Ala/Gly permease 617014 dagA_1 919292 dagA_1 Chlamydophila pneumoniae J138 D-Ala/Gly permease NP_300591.1 615665 D 138677 CDS NP_300592.1 15836068 919300 617153..617512 1 NC_002491.1 hypothetical protein 617512 919300 CPj0537 Chlamydophila pneumoniae J138 hypothetical protein NP_300592.1 617153 D 138677 CDS NP_300593.1 15836069 919302 617532..617834 1 NC_002491.1 hypothetical protein 617834 919302 CPj0538 Chlamydophila pneumoniae J138 hypothetical protein NP_300593.1 617532 D 138677 CDS NP_300594.1 15836070 919301 618025..620868 1 NC_002491.1 hypothetical protein 620868 pmp_19 919301 pmp_19 Chlamydophila pneumoniae J138 hypothetical protein NP_300594.1 618025 D 138677 CDS NP_300595.1 15836071 919298 621014..626185 1 NC_002491.1 hypothetical protein 626185 pmp_20 919298 pmp_20 Chlamydophila pneumoniae J138 hypothetical protein NP_300595.1 621014 D 138677 CDS NP_300596.1 15836072 919305 626490..627326 1 NC_002491.1 solute binding protein 627326 919305 CPj0541 Chlamydophila pneumoniae J138 solute binding protein NP_300596.1 626490 D 138677 CDS NP_300597.1 15836073 919303 627323..628060 1 NC_002491.1 ABC transporter ATPase 628060 919303 CPj0542 Chlamydophila pneumoniae J138 ABC transporter ATPase NP_300597.1 627323 D 138677 CDS NP_300598.1 15836074 919287 628045..628926 1 NC_002491.1 metal transport protein 628926 919287 CPj0543 Chlamydophila pneumoniae J138 metal transport protein NP_300598.1 628045 D 138677 CDS NP_300599.1 15836075 919230 complement(628842..629849) 1 NC_002491.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 629849 obgE 919230 obgE Chlamydophila pneumoniae J138 GTPase ObgE NP_300599.1 628842 R 138677 CDS NP_300600.1 15836076 919284 complement(629950..630204) 1 NC_002491.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 630204 rpmA 919284 rpmA Chlamydophila pneumoniae J138 50S ribosomal protein L27 NP_300600.1 629950 R 138677 CDS NP_300601.1 15836077 919196 complement(630229..630549) 1 NC_002491.1 50S ribosomal protein L21 630549 rplU 919196 rplU Chlamydophila pneumoniae J138 50S ribosomal protein L21 NP_300601.1 630229 R 138677 CDS NP_300602.1 15836078 919308 630981..631511 1 NC_002491.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 631511 ispF 919308 ispF Chlamydophila pneumoniae J138 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase NP_300602.1 630981 D 138677 CDS NP_300603.1 15836079 919307 complement(631508..632551) 1 NC_002491.1 sulfite reductase 632551 cysJ 919307 cysJ Chlamydophila pneumoniae J138 sulfite reductase NP_300603.1 631508 R 138677 CDS NP_300604.1 15836080 919306 complement(632572..632889) 1 NC_002491.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 632889 rpsJ 919306 rpsJ Chlamydophila pneumoniae J138 30S ribosomal protein S10 NP_300604.1 632572 R 138677 CDS NP_300605.1 15836081 919304 complement(632897..634981) 1 NC_002491.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 634981 fusA 919304 fusA Chlamydophila pneumoniae J138 elongation factor G NP_300605.1 632897 R 138677 CDS NP_300606.2 408843729 919310 complement(<635019..635489) 1 NC_002491.1 partial; insertion of G in polyrun G2 in the last codon, leading to elongation by 9 aa; binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 635489 rs7 919310 rs7 Chlamydophila pneumoniae J138 30S ribosomal protein S7 NP_300606.2 <635019 R 138677 CDS NP_300607.1 15836083 919313 complement(635537..635908) 1 NC_002491.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 635908 rpsL 919313 rpsL Chlamydophila pneumoniae J138 30S ribosomal protein S12 NP_300607.1 635537 R 138677 CDS NP_300608.1 15836084 919312 complement(636130..637068) 1 NC_002491.1 hypothetical protein 637068 919312 CPj0553 Chlamydophila pneumoniae J138 hypothetical protein NP_300608.1 636130 R 138677 CDS NP_300609.1 15836085 919311 637175..637465 1 NC_002491.1 hypothetical protein 637465 919311 CPj0554 Chlamydophila pneumoniae J138 hypothetical protein NP_300609.1 637175 D 138677 CDS NP_300610.1 15836086 919309 637619..639565 1 NC_002491.1 tail-specific protease 639565 tsp 919309 tsp Chlamydophila pneumoniae J138 tail-specific protease NP_300610.1 637619 D 138677 CDS NP_300611.1 15836087 919317 complement(639643..640233) 1 NC_002491.1 hypothetical protein 640233 crpA 919317 crpA Chlamydophila pneumoniae J138 hypothetical protein NP_300611.1 639643 R 138677 CDS NP_300612.1 15836088 919316 complement(640512..642182) 1 NC_002491.1 hypothetical protein 642182 omcB 919316 omcB Chlamydophila pneumoniae J138 hypothetical protein NP_300612.1 640512 R 138677 CDS NP_300613.1 15836089 919315 complement(642349..642621) 1 NC_002491.1 hypothetical protein 642621 omcA 919315 omcA Chlamydophila pneumoniae J138 hypothetical protein NP_300613.1 642349 R 138677 CDS NP_300614.1 15836090 919314 643063..643251 1 NC_002491.1 hypothetical protein 643251 919314 CPj0559 Chlamydophila pneumoniae J138 hypothetical protein NP_300614.1 643063 D 138677 CDS NP_300615.1 15836091 919322 complement(643416..644933) 1 NC_002491.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 644933 gltX 919322 gltX Chlamydophila pneumoniae J138 glutamyl-tRNA synthetase NP_300615.1 643416 R 138677 CDS NP_300616.1 15836092 919323 complement(645189..645725) 1 NC_002491.1 hypothetical protein 645725 euo 919323 euo Chlamydophila pneumoniae J138 hypothetical protein NP_300616.1 645189 R 138677 CDS NP_300617.1 15836093 919321 complement(646236..647357) 1 NC_002491.1 hypothetical protein 647357 919321 CPj0562 Chlamydophila pneumoniae J138 hypothetical protein NP_300617.1 646236 R 138677 CDS NP_300618.1 15836094 919320 complement(647611..649377) 1 NC_002491.1 ssDNA exonuclease RecJ 649377 recJ 919320 recJ Chlamydophila pneumoniae J138 ssDNA exonuclease RecJ NP_300618.1 647611 R 138677 CDS NP_300619.1 15836095 919319 complement(649463..653671) 1 NC_002491.1 part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; in these organisms there is an unknown N-terminal domain; preprotein translocase subunits SecD/SecF 653671 secD_secF 919319 secD_secF Chlamydophila pneumoniae J138 preprotein translocase subunits SecD/SecF NP_300619.1 649463 R 138677 CDS NP_300620.1 15836096 919327 complement(653851..654951) 1 NC_002491.1 hypothetical protein 654951 919327 CPj0565 Chlamydophila pneumoniae J138 hypothetical protein NP_300620.1 653851 R 138677 CDS NP_300621.1 15836097 919326 655462..656214 1 NC_002491.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 656214 yaeS 919326 yaeS Chlamydophila pneumoniae J138 undecaprenyl pyrophosphate synthase NP_300621.1 655462 D 138677 CDS NP_300622.1 15836098 919325 656215..657141 1 NC_002491.1 phosphatidate cytidylyltransferase 657141 cdsA 919325 cdsA Chlamydophila pneumoniae J138 phosphatidate cytidylyltransferase NP_300622.1 656215 D 138677 CDS NP_300623.1 15836099 919324 657138..657788 1 NC_002491.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 657788 cmk 919324 cmk Chlamydophila pneumoniae J138 cytidylate kinase NP_300623.1 657138 D 138677 CDS NP_300624.1 15836100 919334 657785..658423 1 NC_002491.1 glycerol-3-P acyltransferase 658423 plsC 919334 plsC Chlamydophila pneumoniae J138 glycerol-3-P acyltransferase NP_300624.1 657785 D 138677 CDS NP_300625.1 15836101 919329 658428..660113 1 NC_002491.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 660113 argS 919329 argS Chlamydophila pneumoniae J138 arginyl-tRNA synthetase NP_300625.1 658428 D 138677 CDS NP_300626.1 15836102 919328 complement(660067..661443) 1 NC_002491.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 661443 murA 919328 murA Chlamydophila pneumoniae J138 UDP-N-acetylglucosamine 1-carboxyvinyltransferase NP_300626.1 660067 R 138677 CDS NP_300627.1 15836103 919332 661673..663940 1 NC_002491.1 hypothetical protein 663940 919332 CPj0572 Chlamydophila pneumoniae J138 hypothetical protein NP_300627.1 661673 D 138677 CDS NP_300628.1 15836104 919318 complement(664009..664725) 1 NC_002491.1 hypothetical protein 664725 yebC 919318 yebC Chlamydophila pneumoniae J138 hypothetical protein NP_300628.1 664009 R 138677 CDS NP_300629.1 15836105 919851 complement(664712..665266) 1 NC_002491.1 hypothetical protein 665266 919851 CPj0574 Chlamydophila pneumoniae J138 hypothetical protein NP_300629.1 664712 R 138677 CDS NP_300630.1 15836106 919337 complement(665300..665815) 1 NC_002491.1 amino group acetyl transferase 665815 yhhY 919337 yhhY Chlamydophila pneumoniae J138 amino group acetyl transferase NP_300630.1 665300 R 138677 CDS NP_300631.1 15836107 919336 complement(665812..666864) 1 NC_002491.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 666864 prfB 919336 prfB Chlamydophila pneumoniae J138 peptide chain release factor 2 NP_300631.1 665812 R 138677 CDS NP_300632.1 15836108 919333 666708..666956 1 NC_002491.1 natural UGA frame-shift 666956 919333 CPj0576B Chlamydophila pneumoniae J138 natural UGA frame-shift NP_300632.1 666708 D 138677 CDS NP_300633.1 15836109 919331 667216..667479 1 NC_002491.1 SWIB (YM74) complex protein 667479 919331 CPj0577 Chlamydophila pneumoniae J138 SWIB (YM74) complex protein NP_300633.1 667216 D 138677 CDS NP_300634.1 15836110 919339 667727..668689 1 NC_002491.1 phosphohydrolase 668689 yaeI 919339 yaeI Chlamydophila pneumoniae J138 phosphohydrolase NP_300634.1 667727 D 138677 CDS NP_300635.1 15836111 919340 668682..669317 1 NC_002491.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 669317 ispD 919340 ispD Chlamydophila pneumoniae J138 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NP_300635.1 668682 D 138677 CDS NP_300636.1 15836112 919338 669314..670117 1 NC_002491.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 670117 truA 919338 truA Chlamydophila pneumoniae J138 tRNA pseudouridine synthase A NP_300636.1 669314 D 138677 CDS NP_300637.1 15836113 919335 complement(670063..670755) 1 NC_002491.1 phosphoglycolate phosphatase 670755 919335 CPj0581 Chlamydophila pneumoniae J138 phosphoglycolate phosphatase NP_300637.1 670063 R 138677 CDS NP_300638.1 15836114 919330 670824..671501 1 NC_002491.1 hypothetical protein 671501 919330 CPj0582 Chlamydophila pneumoniae J138 hypothetical protein NP_300638.1 670824 D 138677 CDS NP_300639.1 15836115 919342 671721..672041 1 NC_002491.1 hypothetical protein 672041 919342 CPj0583 Chlamydophila pneumoniae J138 hypothetical protein NP_300639.1 671721 D 138677 CDS NP_300640.1 15836116 919343 672028..673122 1 NC_002491.1 2-component sensor 673122 atoS 919343 atoS Chlamydophila pneumoniae J138 2-component sensor NP_300640.1 672028 D 138677 CDS NP_300641.1 15836117 919344 complement(673183..675138) 1 NC_002491.1 hypothetical protein 675138 919344 CPj0585 Chlamydophila pneumoniae J138 hypothetical protein NP_300641.1 673183 R 138677 CDS NP_300642.1 15836118 919345 675347..676507 1 NC_002491.1 2-component regulator 676507 atoC 919345 atoC Chlamydophila pneumoniae J138 2-component regulator NP_300642.1 675347 D 138677 CDS NP_300643.1 15836119 919347 676762..677448 1 NC_002491.1 hypothetical protein 677448 yvyD 919347 yvyD Chlamydophila pneumoniae J138 hypothetical protein NP_300643.1 676762 D 138677 CDS NP_300644.1 15836120 919348 677405..677950 1 NC_002491.1 hypothetical protein 677950 919348 CPj0588 Chlamydophila pneumoniae J138 hypothetical protein NP_300644.1 677405 D 138677 CDS NP_300645.1 15836121 919350 677961..678719 1 NC_002491.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 678719 recO 919350 recO Chlamydophila pneumoniae J138 DNA repair protein RecO NP_300645.1 677961 D 138677 CDS NP_300646.1 15836122 919351 complement(678834..679433) 1 NC_002491.1 hypothetical protein 679433 919351 CPj0590 Chlamydophila pneumoniae J138 hypothetical protein NP_300646.1 678834 R 138677 CDS NP_300647.1 15836123 919353 679694..680344 1 NC_002491.1 YagE family protein 680344 yagE 919353 yagE Chlamydophila pneumoniae J138 YagE family protein NP_300647.1 679694 D 138677 CDS NP_300648.1 15836124 919355 680474..680785 1 NC_002491.1 hypothetical protein 680785 yidD 919355 yidD Chlamydophila pneumoniae J138 hypothetical protein NP_300648.1 680474 D 138677 CDS NP_300649.1 15836125 919349 complement(680709..681797) 1 NC_002491.1 hypothetical protein 681797 919349 CPj0593 Chlamydophila pneumoniae J138 hypothetical protein NP_300649.1 680709 R 138677 CDS NP_300650.1 15836126 919356 681904..684282 1 NC_002491.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 684282 pheT 919356 pheT Chlamydophila pneumoniae J138 phenylalanyl-tRNA synthetase subunit beta NP_300650.1 681904 D 138677 CDS NP_300651.1 15836127 919357 684279..685250 1 NC_002491.1 hypothetical protein 685250 919357 CPj0595 Chlamydophila pneumoniae J138 hypothetical protein NP_300651.1 684279 D 138677 CDS NP_300652.1 15836128 919358 685260..685781 1 NC_002491.1 methyltransferase 685781 ada 919358 ada Chlamydophila pneumoniae J138 methyltransferase NP_300652.1 685260 D 138677 CDS NP_300653.1 15836129 919359 complement(685797..687536) 1 NC_002491.1 oligopeptide permease 687536 oppC_2 919359 oppC_2 Chlamydophila pneumoniae J138 oligopeptide permease NP_300653.1 685797 R 138677 CDS NP_300654.1 15836130 919360 complement(687537..689018) 1 NC_002491.1 oligopeptide permease 689018 oppB_2 919360 oppB_2 Chlamydophila pneumoniae J138 oligopeptide permease NP_300654.1 687537 R 138677 CDS NP_300655.1 15836131 919361 complement(689000..691123) 1 NC_002491.1 oligopeptide binding lipoprotein 691123 oppA_5 919361 oppA_5 Chlamydophila pneumoniae J138 oligopeptide binding lipoprotein NP_300655.1 689000 R 138677 CDS NP_300656.1 15836132 919362 complement(691145..691468) 1 NC_002491.1 hypothetical protein 691468 919362 CPj0600 Chlamydophila pneumoniae J138 hypothetical protein NP_300656.1 691145 R 138677 CDS NP_300657.1 15836133 919363 complement(692054..692374) 1 NC_002491.1 hypothetical protein 692374 919363 CPj0601 Chlamydophila pneumoniae J138 hypothetical protein NP_300657.1 692054 R 138677 CDS NP_300658.1 15836134 919364 complement(692422..693426) 1 NC_002491.1 hypothetical protein 693426 919364 CPj0602 Chlamydophila pneumoniae J138 hypothetical protein NP_300658.1 692422 R 138677 CDS NP_300659.1 15836135 919365 693526..694509 1 NC_002491.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 694509 hemH 919365 hemH Chlamydophila pneumoniae J138 ferrochelatase NP_300659.1 693526 D 138677 CDS NP_300660.1 15836136 919366 complement(694514..695266) 1 NC_002491.1 glutamine binding protein 695266 fliY 919366 fliY Chlamydophila pneumoniae J138 glutamine binding protein NP_300660.1 694514 R 138677 CDS NP_300661.1 15836137 919367 complement(695468..696028) 1 NC_002491.1 methylase 696028 yhhF 919367 yhhF Chlamydophila pneumoniae J138 methylase NP_300661.1 695468 R 138677 CDS NP_300662.1 15836138 919368 complement(696025..696765) 1 NC_002491.1 hypothetical protein 696765 919368 CPj0606 Chlamydophila pneumoniae J138 hypothetical protein NP_300662.1 696025 R 138677 CDS NP_300663.1 15836139 919369 complement(696891..698216) 1 NC_002491.1 glucose-1-P adenyltransferase 698216 glgC 919369 glgC Chlamydophila pneumoniae J138 glucose-1-P adenyltransferase NP_300663.1 696891 R 138677 CDS NP_300664.1 15836140 919370 complement(698334..698966) 1 NC_002491.1 catalyzes the formation of orotidine monophosphate from 5-phosphoribosyl-1-pyrophosphate and orotate; orotate phosphoribosyltransferase 698966 919370 CPj0608 Chlamydophila pneumoniae J138 orotate phosphoribosyltransferase NP_300664.1 698334 R 138677 CDS NP_300665.1 15836141 919846 699026..699310 1 NC_002491.1 hypothetical protein 699310 919846 CPj0609 Chlamydophila pneumoniae J138 hypothetical protein NP_300665.1 699026 D 138677 CDS NP_300666.1 15836142 919372 complement(699347..700741) 1 NC_002491.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 700741 rho 919372 rho Chlamydophila pneumoniae J138 transcription termination factor Rho NP_300666.1 699347 R 138677 CDS NP_300667.1 15836143 919373 complement(700738..701346) 1 NC_002491.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 701346 coaE 919373 coaE Chlamydophila pneumoniae J138 dephospho-CoA kinase NP_300667.1 700738 R 138677 CDS NP_300668.1 15836144 919374 complement(701340..703952) 1 NC_002491.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 703952 polA 919374 polA Chlamydophila pneumoniae J138 DNA polymerase I NP_300668.1 701340 R 138677 CDS NP_300669.1 15836145 919375 complement(703976..704977) 1 NC_002491.1 protease 704977 sohB 919375 sohB Chlamydophila pneumoniae J138 protease NP_300669.1 703976 R 138677 CDS NP_300670.1 15836146 919376 complement(705101..706723) 1 NC_002491.1 ADP/ATP translocase 706723 adt_2 919376 adt_2 Chlamydophila pneumoniae J138 ADP/ATP translocase NP_300670.1 705101 R 138677 CDS NP_300671.1 15836147 919378 complement(706952..707458) 1 NC_002491.1 glycerol-3-P phosphatidyltransferase 707458 pgsA_1 919378 pgsA_1 Chlamydophila pneumoniae J138 glycerol-3-P phosphatidyltransferase NP_300671.1 706952 R 138677 CDS NP_300672.1 15836148 919380 708112..709461 1 NC_002491.1 unwinds double stranded DNA; replicative DNA helicase 709461 dnaB 919380 dnaB Chlamydophila pneumoniae J138 replicative DNA helicase NP_300672.1 708112 D 138677 CDS NP_300673.1 15836149 919381 709805..711640 1 NC_002491.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 711640 gidA 919381 gidA Chlamydophila pneumoniae J138 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA NP_300673.1 709805 D 138677 CDS NP_300674.1 15836150 919382 711627..712334 1 NC_002491.1 lipoate-protein ligase A 712334 lplA_2 919382 lplA_2 Chlamydophila pneumoniae J138 lipoate-protein ligase A NP_300674.1 711627 D 138677 CDS NP_300675.1 15836151 919383 complement(712331..712765) 1 NC_002491.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 712765 ndk 919383 ndk Chlamydophila pneumoniae J138 nucleoside diphosphate kinase NP_300675.1 712331 R 138677 CDS NP_300676.1 15836152 919384 complement(712837..713460) 1 NC_002491.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 713460 ruvA 919384 ruvA Chlamydophila pneumoniae J138 Holliday junction DNA helicase RuvA NP_300676.1 712837 R 138677 CDS NP_300677.1 15836153 919385 complement(713462..713968) 1 NC_002491.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 713968 ruvC 919385 ruvC Chlamydophila pneumoniae J138 Holliday junction resolvase NP_300677.1 713462 R 138677 CDS NP_300678.1 15836154 919386 complement(714111..715073) 1 NC_002491.1 hypothetical protein 715073 919386 CPj0622 Chlamydophila pneumoniae J138 hypothetical protein NP_300678.1 714111 R 138677 CDS NP_300679.1 15836155 919388 complement(715481..716314) 1 NC_002491.1 hypothetical protein 716314 919388 CPj0623 Chlamydophila pneumoniae J138 hypothetical protein NP_300679.1 715481 R 138677 CDS NP_300680.1 15836156 919389 complement(716329..717336) 1 NC_002491.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase 717336 gapA 919389 gapA Chlamydophila pneumoniae J138 glyceraldehyde-3-phosphate dehydrogenase NP_300680.1 716329 R 138677 CDS NP_300681.1 15836157 919390 complement(717378..717806) 1 NC_002491.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 717806 rplQ 919390 rplQ Chlamydophila pneumoniae J138 50S ribosomal protein L17 NP_300681.1 717378 R 138677 CDS NP_300682.1 15836158 919391 complement(717813..718937) 1 NC_002491.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 718937 rpoA 919391 rpoA Chlamydophila pneumoniae J138 DNA-directed RNA polymerase subunit alpha NP_300682.1 717813 R 138677 CDS NP_300683.1 15836159 919392 complement(718958..719359) 1 NC_002491.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 719359 rs11 919392 rs11 Chlamydophila pneumoniae J138 30S ribosomal protein S11 NP_300683.1 718958 R 138677 CDS NP_300684.1 15836160 919393 complement(719381..719749) 1 NC_002491.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 719749 rpsM 919393 rpsM Chlamydophila pneumoniae J138 30S ribosomal protein S13 NP_300684.1 719381 R 138677 CDS NP_300685.1 15836161 919394 complement(719805..721178) 1 NC_002491.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 721178 secY 919394 secY Chlamydophila pneumoniae J138 preprotein translocase subunit SecY NP_300685.1 719805 R 138677 CDS NP_300686.1 15836162 919395 complement(721203..721637) 1 NC_002491.1 late assembly protein; 50S ribosomal protein L15 721637 rplO 919395 rplO Chlamydophila pneumoniae J138 50S ribosomal protein L15 NP_300686.1 721203 R 138677 CDS NP_300687.1 15836163 919396 complement(721630..722127) 1 NC_002491.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 722127 rpsE 919396 rpsE Chlamydophila pneumoniae J138 30S ribosomal protein S5 NP_300687.1 721630 R 138677 CDS NP_300688.1 15836164 919460 complement(722145..722516) 1 NC_002491.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 722516 rplR 919460 rplR Chlamydophila pneumoniae J138 50S ribosomal protein L18 NP_300688.1 722145 R 138677 CDS NP_300689.1 15836165 919488 complement(722527..723078) 1 NC_002491.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 723078 rplF 919488 rplF Chlamydophila pneumoniae J138 50S ribosomal protein L6 NP_300689.1 722527 R 138677 CDS NP_300690.1 15836166 919398 complement(723105..723506) 1 NC_002491.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 723506 rpsH 919398 rpsH Chlamydophila pneumoniae J138 30S ribosomal protein S8 NP_300690.1 723105 R 138677 CDS NP_300691.1 15836167 919400 complement(723524..724066) 1 NC_002491.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 724066 rplE 919400 rplE Chlamydophila pneumoniae J138 50S ribosomal protein L5 NP_300691.1 723524 R 138677 CDS NP_300692.1 15836168 919402 complement(724068..724403) 1 NC_002491.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 724403 rplX 919402 rplX Chlamydophila pneumoniae J138 50S ribosomal protein L24 NP_300692.1 724068 R 138677 CDS NP_300693.1 15836169 919403 complement(724417..724785) 1 NC_002491.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 724785 rplN 919403 rplN Chlamydophila pneumoniae J138 50S ribosomal protein L14 NP_300693.1 724417 R 138677 CDS NP_300694.1 15836170 919476 complement(724808..725068) 1 NC_002491.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 725068 rpsQ 919476 rpsQ Chlamydophila pneumoniae J138 30S ribosomal protein S17 NP_300694.1 724808 R 138677 CDS NP_300695.1 15836171 918771 complement(725061..725279) 1 NC_002491.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 725279 rpmC 918771 rpmC Chlamydophila pneumoniae J138 50S ribosomal protein L29 NP_300695.1 725061 R 138677 CDS NP_300696.1 15836172 918770 complement(725282..725698) 1 NC_002491.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 725698 rplP 918770 rplP Chlamydophila pneumoniae J138 50S ribosomal protein L16 NP_300696.1 725282 R 138677 CDS NP_300697.1 15836173 919404 complement(725727..726398) 1 NC_002491.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 726398 rpsC 919404 rpsC Chlamydophila pneumoniae J138 30S ribosomal protein S3 NP_300697.1 725727 R 138677 CDS NP_300698.1 15836174 919405 complement(726414..726749) 1 NC_002491.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 726749 rplV 919405 rplV Chlamydophila pneumoniae J138 50S ribosomal protein L22 NP_300698.1 726414 R 138677 CDS NP_300699.1 15836175 919408 complement(726768..727034) 1 NC_002491.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 727034 rpsS 919408 rpsS Chlamydophila pneumoniae J138 30S ribosomal protein S19 NP_300699.1 726768 R 138677 CDS NP_300700.1 15836176 919409 complement(727040..727894) 1 NC_002491.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 727894 rplB 919409 rplB Chlamydophila pneumoniae J138 50S ribosomal protein L2 NP_300700.1 727040 R 138677 CDS NP_300701.1 15836177 919410 complement(727916..728251) 1 NC_002491.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 728251 rplW 919410 rplW Chlamydophila pneumoniae J138 50S ribosomal protein L23 NP_300701.1 727916 R 138677 CDS NP_300702.1 15836178 919407 complement(728268..728942) 1 NC_002491.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 728942 rplD 919407 rplD Chlamydophila pneumoniae J138 50S ribosomal protein L4 NP_300702.1 728268 R 138677 CDS NP_300703.2 161353803 919406 complement(728975..729634) 1 NC_002491.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 729634 rplC 919406 rplC Chlamydophila pneumoniae J138 50S ribosomal protein L3 NP_300703.2 728975 R 138677 CDS NP_300704.1 15836180 919401 complement(729923..730924) 1 NC_002491.1 hypothetical protein 730924 919401 CPj0648 Chlamydophila pneumoniae J138 hypothetical protein NP_300704.1 729923 R 138677 CDS NP_300705.1 15836181 919399 complement(731028..731993) 1 NC_002491.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 731993 fmt 919399 fmt Chlamydophila pneumoniae J138 methionyl-tRNA formyltransferase NP_300705.1 731028 R 138677 CDS NP_300706.1 15836182 919411 complement(731983..732822) 1 NC_002491.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 732822 lpxA 919411 lpxA Chlamydophila pneumoniae J138 UDP-N-acetylglucosamine acyltransferase NP_300706.1 731983 R 138677 CDS NP_300707.1 15836183 919412 complement(732835..733296) 1 NC_002491.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 733296 fabZ 919412 fabZ Chlamydophila pneumoniae J138 (3R)-hydroxymyristoyl-ACP dehydratase NP_300707.1 732835 R 138677 CDS NP_300708.1 15836184 919413 complement(733308..734156) 1 NC_002491.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 734156 lpxC 919413 lpxC Chlamydophila pneumoniae J138 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase NP_300708.1 733308 R 138677 CDS NP_300709.1 15836185 919414 complement(734186..735811) 1 NC_002491.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 735811 lnt 919414 lnt Chlamydophila pneumoniae J138 apolipoprotein N-acyltransferase NP_300709.1 734186 R 138677 CDS NP_300710.1 15836186 919415 complement(735821..736288) 1 NC_002491.1 acyl-CoA thioesterase 736288 yciA 919415 yciA Chlamydophila pneumoniae J138 acyl-CoA thioesterase NP_300710.1 735821 R 138677 CDS NP_300711.1 15836187 919416 complement(736419..737168) 1 NC_002491.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 737168 dnaQ_2 919416 dnaQ_2 Chlamydophila pneumoniae J138 DNA polymerase III subunit epsilon NP_300711.1 736419 R 138677 CDS NP_300712.1 15836188 919417 737193..737372 1 NC_002491.1 hypothetical protein 737372 919417 CPj0656 Chlamydophila pneumoniae J138 hypothetical protein NP_300712.1 737193 D 138677 CDS NP_300713.1 15836189 919418 complement(737369..737794) 1 NC_002491.1 hypothetical protein 737794 yjeE 919418 yjeE Chlamydophila pneumoniae J138 hypothetical protein NP_300713.1 737369 R 138677 CDS NP_300714.1 15836190 919419 complement(737773..738489) 1 NC_002491.1 hypothetical protein 738489 919419 CPj0658 Chlamydophila pneumoniae J138 hypothetical protein NP_300714.1 737773 R 138677 CDS NP_300715.1 15836191 919421 738854..739162 1 NC_002491.1 thioredoxin 739162 trxA 919421 trxA Chlamydophila pneumoniae J138 thioredoxin NP_300715.1 738854 D 138677 CDS NP_300716.1 15836192 919422 complement(739178..739648) 1 NC_002491.1 rRNA methylase 739648 spoU_2 919422 spoU_2 Chlamydophila pneumoniae J138 rRNA methylase NP_300716.1 739178 R 138677 CDS NP_300717.1 15836193 919423 complement(739645..740421) 1 NC_002491.1 FKBP-type peptidylprolyl isomerase 740421 mip 919423 mip Chlamydophila pneumoniae J138 FKBP-type peptidylprolyl isomerase NP_300717.1 739645 R 138677 CDS NP_300718.1 15836194 919397 complement(740490..742244) 1 NC_002491.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 742244 aspS 919397 aspS Chlamydophila pneumoniae J138 aspartyl-tRNA synthetase NP_300718.1 740490 R 138677 CDS NP_300719.1 15836195 919377 complement(742219..743511) 1 NC_002491.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 743511 hisS 919377 hisS Chlamydophila pneumoniae J138 histidyl-tRNA synthetase NP_300719.1 742219 R 138677 CDS NP_300720.1 15836196 919354 complement(743875..744078) 1 NC_002491.1 hypothetical protein 744078 919354 CPj0664 Chlamydophila pneumoniae J138 hypothetical protein NP_300720.1 743875 R 138677 CDS NP_300721.1 15836197 919371 744322..745689 1 NC_002491.1 hexosphosphate transport 745689 uhpC 919371 uhpC Chlamydophila pneumoniae J138 hexosphosphate transport NP_300721.1 744322 D 138677 CDS NP_300722.1 15836198 919424 745709..749431 1 NC_002491.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 749431 dnaE 919424 dnaE Chlamydophila pneumoniae J138 DNA polymerase III subunit alpha NP_300722.1 745709 D 138677 CDS NP_300723.1 15836199 919425 complement(749495..750379) 1 NC_002491.1 hypothetical protein 750379 919425 CPj0667 Chlamydophila pneumoniae J138 hypothetical protein NP_300723.1 749495 R 138677 CDS NP_300724.1 15836200 919426 750531..751487 1 NC_002491.1 hypothetical protein 751487 919426 CPj0668 Chlamydophila pneumoniae J138 hypothetical protein NP_300724.1 750531 D 138677 CDS NP_300725.1 15836201 919428 751501..752100 1 NC_002491.1 hypothetical protein 752100 919428 CPj0669 Chlamydophila pneumoniae J138 hypothetical protein NP_300725.1 751501 D 138677 CDS NP_300726.1 15836202 919429 752087..752521 1 NC_002491.1 sigma regulatory factor-histidine kinase 752521 rsbW 919429 rsbW Chlamydophila pneumoniae J138 sigma regulatory factor-histidine kinase NP_300726.1 752087 D 138677 CDS NP_300727.1 15836203 919430 complement(752524..752952) 1 NC_002491.1 hypothetical protein 752952 919430 CPj0671 Chlamydophila pneumoniae J138 hypothetical protein NP_300727.1 752524 R 138677 CDS NP_300728.1 15836204 919431 753063..754373 1 NC_002491.1 D-Ala-D-Ala carboxypeptidase 754373 dacF 919431 dacF Chlamydophila pneumoniae J138 D-Ala-D-Ala carboxypeptidase NP_300728.1 753063 D 138677 CDS NP_300729.1 15836205 919432 754609..754788 1 NC_002491.1 hypothetical protein 754788 919432 CPj0673 Chlamydophila pneumoniae J138 hypothetical protein NP_300729.1 754609 D 138677 CDS NP_300730.1 15836206 919433 complement(754896..755990) 1 NC_002491.1 RNA methyltransferase 755990 fmu 919433 fmu Chlamydophila pneumoniae J138 RNA methyltransferase NP_300730.1 754896 R 138677 CDS NP_300731.1 15836207 919434 complement(756087..757241) 1 NC_002491.1 hypothetical protein 757241 919434 CPj0675 Chlamydophila pneumoniae J138 hypothetical protein NP_300731.1 756087 R 138677 CDS NP_300732.1 15836208 919435 complement(757370..758539) 1 NC_002491.1 hypothetical protein 758539 919435 CPj0676 Chlamydophila pneumoniae J138 hypothetical protein NP_300732.1 757370 R 138677 CDS NP_300733.1 15836209 919436 complement(758575..759723) 1 NC_002491.1 hypothetical protein 759723 919436 CPj0677 Chlamydophila pneumoniae J138 hypothetical protein NP_300733.1 758575 R 138677 CDS NP_300734.1 15836210 919437 complement(760001..760642) 1 NC_002491.1 hypothetical protein 760642 919437 CPj0678 Chlamydophila pneumoniae J138 hypothetical protein NP_300734.1 760001 R 138677 CDS NP_300735.1 15836211 919438 complement(761044..762252) 1 NC_002491.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 762252 pgk 919438 pgk Chlamydophila pneumoniae J138 phosphoglycerate kinase NP_300735.1 761044 R 138677 CDS NP_300736.1 15836212 919439 complement(762290..763570) 1 NC_002491.1 phosphate permease 763570 ygo4 919439 ygo4 Chlamydophila pneumoniae J138 phosphate permease NP_300736.1 762290 R 138677 CDS NP_300737.1 15836213 919440 complement(763577..764251) 1 NC_002491.1 hypothetical protein 764251 919440 CPj0681 Chlamydophila pneumoniae J138 hypothetical protein NP_300737.1 763577 R 138677 CDS NP_300738.1 15836214 919441 764306..765280 1 NC_002491.1 peptide ABC transporter ATPase 765280 dppD 919441 dppD Chlamydophila pneumoniae J138 peptide ABC transporter ATPase NP_300738.1 764306 D 138677 CDS NP_300739.1 15836215 919442 765270..766244 1 NC_002491.1 peptide ABC transporter ATPase 766244 dppF_2 919442 dppF_2 Chlamydophila pneumoniae J138 peptide ABC transporter ATPase NP_300739.1 765270 D 138677 CDS NP_300740.1 15836216 919443 complement(766500..767360) 1 NC_002491.1 chromosome partitioning protein 767360 parB 919443 parB Chlamydophila pneumoniae J138 chromosome partitioning protein NP_300740.1 766500 R 138677 CDS NP_300741.1 15836217 919444 767390..767542 1 NC_002491.1 hypothetical protein 767542 919444 CPj0685 Chlamydophila pneumoniae J138 hypothetical protein NP_300741.1 767390 D 138677 CDS NP_300742.1 15836218 919445 complement(767495..767683) 1 NC_002491.1 hypothetical protein 767683 919445 CPj0686 Chlamydophila pneumoniae J138 hypothetical protein NP_300742.1 767495 R 138677 CDS NP_300743.1 15836219 919446 767886..768539 1 NC_002491.1 hypothetical protein 768539 919446 CPj0687 Chlamydophila pneumoniae J138 hypothetical protein NP_300743.1 767886 D 138677 CDS NP_300744.1 15836220 919447 768704..769462 1 NC_002491.1 hypothetical protein 769462 919447 CPj0688 Chlamydophila pneumoniae J138 hypothetical protein NP_300744.1 768704 D 138677 CDS NP_300745.1 15836221 919449 complement(769506..770726) 1 NC_002491.1 NifS-related aminotransferase 770726 yfhO_1 919449 yfhO_1 Chlamydophila pneumoniae J138 NifS-related aminotransferase NP_300745.1 769506 R 138677 CDS NP_300746.1 15836222 919450 complement(770755..772002) 1 NC_002491.1 ABC transporter membrane protein 772002 919450 CPj0690 Chlamydophila pneumoniae J138 ABC transporter membrane protein NP_300746.1 770755 R 138677 CDS NP_300747.1 15836223 919451 complement(772004..772774) 1 NC_002491.1 ABC transporter ATPase 772774 abcX 919451 abcX Chlamydophila pneumoniae J138 ABC transporter ATPase NP_300747.1 772004 R 138677 CDS NP_300748.1 15836224 919452 complement(772780..774234) 1 NC_002491.1 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase 774234 919452 CPj0692 Chlamydophila pneumoniae J138 cysteine desulfurase NP_300748.1 772780 R 138677 CDS NP_300749.1 15836225 919456 complement(774559..775578) 1 NC_002491.1 hypothetical protein 775578 919456 CPj0693 Chlamydophila pneumoniae J138 hypothetical protein NP_300749.1 774559 R 138677 CDS NP_300750.1 15836226 919457 complement(775649..778921) 1 NC_002491.1 PBP2-transglycosylase/transpeptidase 778921 pbp2 919457 pbp2 Chlamydophila pneumoniae J138 PBP2-transglycosylase/transpeptidase NP_300750.1 775649 R 138677 CDS NP_300751.1 15836227 919458 779537..780706 1 NC_002491.1 major outer membrane protein 780706 ompA 919458 ompA Chlamydophila pneumoniae J138 major outer membrane protein NP_300751.1 779537 D 138677 CDS NP_300752.1 15836228 919462 781090..781923 1 NC_002491.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 781923 rpsB 919462 rpsB Chlamydophila pneumoniae J138 30S ribosomal protein S2 NP_300752.1 781090 D 138677 CDS NP_300753.1 15836229 919464 781923..782771 1 NC_002491.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 782771 tsf 919464 tsf Chlamydophila pneumoniae J138 elongation factor Ts NP_300753.1 781923 D 138677 CDS NP_300754.1 15836230 919465 782779..783525 1 NC_002491.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 783525 pyrH 919465 pyrH Chlamydophila pneumoniae J138 uridylate kinase NP_300754.1 782779 D 138677 CDS NP_300755.1 15836231 919466 783503..784045 1 NC_002491.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 784045 frr 919466 frr Chlamydophila pneumoniae J138 ribosome recycling factor NP_300755.1 783503 D 138677 CDS NP_300756.1 15836232 919461 784418..784933 1 NC_002491.1 hypothetical protein 784933 919461 CPj0700 Chlamydophila pneumoniae J138 hypothetical protein NP_300756.1 784418 D 138677 CDS NP_300757.1 15836233 919468 784920..785996 1 NC_002491.1 ATP:guanido phosphotransferase 785996 karG 919468 karG Chlamydophila pneumoniae J138 ATP:guanido phosphotransferase NP_300757.1 784920 D 138677 CDS NP_300758.1 15836234 919471 complement(786247..789006) 1 NC_002491.1 YopC/Gen secretion protein D 789006 yscC 919471 yscC Chlamydophila pneumoniae J138 YopC/Gen secretion protein D NP_300758.1 786247 R 138677 CDS NP_300759.1 15836235 919474 complement(789003..790511) 1 NC_002491.1 S/T protein kinase 790511 919474 CPj0703 Chlamydophila pneumoniae J138 S/T protein kinase NP_300759.1 789003 R 138677 CDS NP_300760.1 15836236 919472 complement(790527..791642) 1 NC_002491.1 type III secretion system protein 791642 fliN 919472 fliN Chlamydophila pneumoniae J138 type III secretion system protein NP_300760.1 790527 R 138677 CDS NP_300761.1 15836237 919467 complement(791652..792494) 1 NC_002491.1 hypothetical protein 792494 919467 CPj0705 Chlamydophila pneumoniae J138 hypothetical protein NP_300761.1 791652 R 138677 CDS NP_300762.1 15836238 919463 complement(792498..793004) 1 NC_002491.1 hypothetical protein 793004 919463 CPj0706 Chlamydophila pneumoniae J138 hypothetical protein NP_300762.1 792498 R 138677 CDS NP_300763.1 15836239 919477 complement(793022..794350) 1 NC_002491.1 flagellar-type ATPase; type III secretion system ATPase 794350 yscN 919477 yscN Chlamydophila pneumoniae J138 type III secretion system ATPase NP_300763.1 793022 R 138677 CDS NP_300764.1 15836240 919478 complement(794352..795026) 1 NC_002491.1 hypothetical protein 795026 919478 CPj0708 Chlamydophila pneumoniae J138 hypothetical protein NP_300764.1 794352 R 138677 CDS NP_300765.1 15836241 919475 complement(795060..795509) 1 NC_002491.1 hypothetical protein 795509 919475 CPj0709 Chlamydophila pneumoniae J138 hypothetical protein NP_300765.1 795060 R 138677 CDS NP_300766.1 15836242 919473 complement(795528..795782) 1 NC_002491.1 hypothetical protein 795782 919473 CPj0710 Chlamydophila pneumoniae J138 hypothetical protein NP_300766.1 795528 R 138677 CDS NP_300767.1 15836243 919470 complement(795804..796052) 1 NC_002491.1 hypothetical protein 796052 919470 CPj0711 Chlamydophila pneumoniae J138 hypothetical protein NP_300767.1 795804 R 138677 CDS NP_300768.1 15836244 919479 complement(796099..798636) 1 NC_002491.1 adenylate cyclase homolog; FHA domain-containing protein 798636 919479 CPj0712 Chlamydophila pneumoniae J138 FHA domain-containing protein NP_300768.1 796099 R 138677 CDS NP_300769.1 15836245 919484 complement(798650..799042) 1 NC_002491.1 hypothetical protein 799042 919484 CPj0713 Chlamydophila pneumoniae J138 hypothetical protein NP_300769.1 798650 R 138677 CDS NP_300770.1 15836246 919483 complement(799409..800428) 1 NC_002491.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 800428 hemA 919483 hemA Chlamydophila pneumoniae J138 glutamyl-tRNA reductase NP_300770.1 799409 R 138677 CDS NP_300771.1 15836247 919482 800978..802786 1 NC_002491.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 802786 gyrB_2 919482 gyrB_2 Chlamydophila pneumoniae J138 DNA topoisomerase IV subunit B NP_300771.1 800978 D 138677 CDS NP_300772.1 15836248 919481 802790..804226 1 NC_002491.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 804226 gyrA_2 919481 gyrA_2 Chlamydophila pneumoniae J138 DNA topoisomerase IV subunit A NP_300772.1 802790 D 138677 CDS NP_300773.1 15836249 919480 804331..804630 1 NC_002491.1 hypothetical protein 804630 919480 CPj0717 Chlamydophila pneumoniae J138 hypothetical protein NP_300773.1 804331 D 138677 CDS NP_300774.1 15836250 918781 804630..804950 1 NC_002491.1 hypothetical protein 804950 918781 CPj0718 Chlamydophila pneumoniae J138 hypothetical protein NP_300774.1 804630 D 138677 CDS NP_300775.1 15836251 919485 805237..806214 1 NC_002491.1 pseudouridine synthase 806214 sfhB 919485 sfhB Chlamydophila pneumoniae J138 pseudouridine synthase NP_300775.1 805237 D 138677 CDS NP_300776.1 15836252 919489 806324..806560 1 NC_002491.1 hypothetical protein 806560 919489 CPj0720 Chlamydophila pneumoniae J138 hypothetical protein NP_300776.1 806324 D 138677 CDS NP_300777.1 15836253 919487 807004..807813 1 NC_002491.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 807813 kdsA 919487 kdsA Chlamydophila pneumoniae J138 2-dehydro-3-deoxyphosphooctonate aldolase NP_300777.1 807004 D 138677 CDS NP_300778.1 15836254 919486 807810..808298 1 NC_002491.1 hypothetical protein 808298 919486 CPj0722 Chlamydophila pneumoniae J138 hypothetical protein NP_300778.1 807810 D 138677 CDS NP_300779.1 15836255 919493 808305..809027 1 NC_002491.1 ABC transporter ATPase 809027 yhbG 919493 yhbG Chlamydophila pneumoniae J138 ABC transporter ATPase NP_300779.1 808305 D 138677 CDS NP_300780.1 15836256 919494 complement(809024..809848) 1 NC_002491.1 hypothetical protein 809848 919494 CPj0724 Chlamydophila pneumoniae J138 hypothetical protein NP_300780.1 809024 R 138677 CDS NP_300781.1 15836257 919496 complement(809905..810132) 1 NC_002491.1 hypothetical protein 810132 919496 CPj0725 Chlamydophila pneumoniae J138 hypothetical protein NP_300781.1 809905 R 138677 CDS NP_300782.1 15836258 919500 complement(810198..812693) 1 NC_002491.1 hypothetical protein 812693 919500 CPj0726 Chlamydophila pneumoniae J138 hypothetical protein NP_300782.1 810198 R 138677 CDS NP_300783.1 15836259 919501 812898..815516 1 NC_002491.1 hypothetical protein 815516 919501 CPj0727 Chlamydophila pneumoniae J138 hypothetical protein NP_300783.1 812898 D 138677 CDS NP_300784.1 15836260 919499 complement(815843..817798) 1 NC_002491.1 hypothetical protein 817798 919499 CPj0728 Chlamydophila pneumoniae J138 hypothetical protein NP_300784.1 815843 R 138677 CDS NP_300785.1 15836261 919498 complement(817910..819178) 1 NC_002491.1 hypothetical protein 819178 919498 CPj0729 Chlamydophila pneumoniae J138 hypothetical protein NP_300785.1 817910 R 138677 CDS NP_300786.1 15836262 919497 complement(819281..820924) 1 NC_002491.1 hypothetical protein 820924 mviN 919497 mviN Chlamydophila pneumoniae J138 hypothetical protein NP_300786.1 819281 R 138677 CDS NP_300787.1 15836263 919492 820908..821084 1 NC_002491.1 hypothetical protein 821084 919492 CPj0731 Chlamydophila pneumoniae J138 hypothetical protein NP_300787.1 820908 D 138677 CDS NP_300788.1 15836264 919495 821419..822300 1 NC_002491.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 822300 nfo 919495 nfo Chlamydophila pneumoniae J138 endonuclease IV NP_300788.1 821419 D 138677 CDS NP_300789.1 15836265 919503 complement(822419..823048) 1 NC_002491.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 823048 rpsD 919503 rpsD Chlamydophila pneumoniae J138 30S ribosomal protein S4 NP_300789.1 822419 R 138677 CDS NP_300790.1 15836266 919505 823265..824239 1 NC_002491.1 hypothetical protein 824239 yceA 919505 yceA Chlamydophila pneumoniae J138 hypothetical protein NP_300790.1 823265 D 138677 CDS NP_300791.1 15836267 919506 complement(824321..824989) 1 NC_002491.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 824989 919506 CPj0735 Chlamydophila pneumoniae J138 uridine kinase NP_300791.1 824321 R 138677 CDS NP_300792.1 15836268 919507 complement(825310..827007) 1 NC_002491.1 efflux protein 827007 ygeD 919507 ygeD Chlamydophila pneumoniae J138 efflux protein NP_300792.1 825310 R 138677 CDS NP_300793.1 15836269 919508 827006..830080 1 NC_002491.1 exodeoxyribonuclease V subunit gamma 830080 recC 919508 recC Chlamydophila pneumoniae J138 exodeoxyribonuclease V subunit gamma NP_300793.1 827006 D 138677 CDS NP_300794.1 15836270 919511 830067..833219 1 NC_002491.1 exodeoxyribonuclease V subunit beta 833219 recB 919511 recB Chlamydophila pneumoniae J138 exodeoxyribonuclease V subunit beta NP_300794.1 830067 D 138677 CDS NP_300795.1 15836271 919512 complement(833179..834192) 1 NC_002491.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 834192 919512 CPj0739 Chlamydophila pneumoniae J138 rod shape-determining protein MreC NP_300795.1 833179 R 138677 CDS NP_300796.1 15836272 919513 complement(834182..835369) 1 NC_002491.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 835369 tyrB 919513 tyrB Chlamydophila pneumoniae J138 aromatic amino acid aminotransferase NP_300796.1 834182 R 138677 CDS NP_300797.1 15836273 919509 complement(835503..837671) 1 NC_002491.1 contains N-terminal domain of unknown function fused to transcription elongation factor; GreA is necessary for efficient RNA polymerization through arresting sites; cleaves the nascent transcript and allows resumption of transcription elongation; transcript cleavage factor 837671 greA 919509 greA Chlamydophila pneumoniae J138 transcript cleavage factor NP_300797.1 835503 R 138677 CDS NP_300798.1 15836274 919504 837784..838212 1 NC_002491.1 hypothetical protein 838212 919504 CPj0742 Chlamydophila pneumoniae J138 hypothetical protein NP_300798.1 837784 D 138677 CDS NP_300799.1 15836275 919502 838283..839686 1 NC_002491.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 839686 nqrA 919502 nqrA Chlamydophila pneumoniae J138 Na(+)-translocating NADH-quinone reductase subunit A NP_300799.1 838283 D 138677 CDS NP_300800.1 15836276 919514 complement(839707..840705) 1 NC_002491.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 840705 hemB 919514 hemB Chlamydophila pneumoniae J138 delta-aminolevulinic acid dehydratase NP_300800.1 839707 R 138677 CDS NP_300801.1 15836277 919516 complement(841060..841224) 1 NC_002491.1 hypothetical protein 841224 919516 CPj0745 Chlamydophila pneumoniae J138 hypothetical protein NP_300801.1 841060 R 138677 CDS NP_300802.1 15836278 919517 841296..842891 1 NC_002491.1 hypothetical protein 842891 919517 CPj0746 Chlamydophila pneumoniae J138 hypothetical protein NP_300802.1 841296 D 138677 CDS NP_300803.1 15836279 919518 843003..843188 1 NC_002491.1 hypothetical protein 843188 919518 CPj0747A Chlamydophila pneumoniae J138 hypothetical protein NP_300803.1 843003 D 138677 CDS NP_300804.1 15836280 919519 complement(843127..843438) 1 NC_002491.1 hypothetical protein 843438 919519 CPj0747B Chlamydophila pneumoniae J138 hypothetical protein NP_300804.1 843127 R 138677 CDS NP_300805.1 15836281 919522 complement(843439..844308) 1 NC_002491.1 geranyl transtransferase 844308 ispA 919522 ispA Chlamydophila pneumoniae J138 geranyl transtransferase NP_300805.1 843439 R 138677 CDS NP_300806.1 15836282 919524 complement(844324..844950) 1 NC_002491.1 UDP-GlcNAc pyrophosphorylase 844950 glmU 919524 glmU Chlamydophila pneumoniae J138 UDP-GlcNAc pyrophosphorylase NP_300806.1 844324 R 138677 CDS NP_300807.1 15836283 919520 complement(845025..845732) 1 NC_002491.1 probable; HTH DNA-binding domain-containing protein 845732 tctD 919520 tctD Chlamydophila pneumoniae J138 HTH DNA-binding domain-containing protein NP_300807.1 845025 R 138677 CDS NP_300808.1 15836284 918776 845929..847758 1 NC_002491.1 hypothetical protein 847758 918776 CPj0751 Chlamydophila pneumoniae J138 hypothetical protein NP_300808.1 845929 D 138677 CDS NP_300809.1 15836285 919515 847925..849406 1 NC_002491.1 exodeoxyribonuclease V subunit alpha 849406 recD_2 919515 recD_2 Chlamydophila pneumoniae J138 exodeoxyribonuclease V subunit alpha NP_300809.1 847925 D 138677 CDS NP_300810.1 15836286 919523 complement(849479..850327) 1 NC_002491.1 hypothetical protein 850327 919523 CPj0753 Chlamydophila pneumoniae J138 hypothetical protein NP_300810.1 849479 R 138677 CDS NP_300811.1 15836287 919525 complement(850358..850657) 1 NC_002491.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 850657 rpsT 919525 rpsT Chlamydophila pneumoniae J138 30S ribosomal protein S20 NP_300811.1 850358 R 138677 CDS NP_300812.1 15836288 919526 850918..852123 1 NC_002491.1 hypothetical protein 852123 919526 CPj0755 Chlamydophila pneumoniae J138 hypothetical protein NP_300812.1 850918 D 138677 CDS NP_300813.1 15836289 919527 852282..854000 1 NC_002491.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; RNA polymerase sigma factor 854000 rpoD 919527 rpoD Chlamydophila pneumoniae J138 RNA polymerase sigma factor NP_300813.1 852282 D 138677 CDS NP_300814.1 15836290 919528 854054..854458 1 NC_002491.1 dihydroneopterin aldolase 854458 folX 919528 folX Chlamydophila pneumoniae J138 dihydroneopterin aldolase NP_300814.1 854054 D 138677 CDS NP_300815.1 15836291 919529 854431..855783 1 NC_002491.1 dihydropteroate synthase 855783 folP 919529 folP Chlamydophila pneumoniae J138 dihydropteroate synthase NP_300815.1 854431 D 138677 CDS NP_300816.1 15836292 919530 855809..856321 1 NC_002491.1 dihydrofolate reductase 856321 folA 919530 folA Chlamydophila pneumoniae J138 dihydrofolate reductase NP_300816.1 855809 D 138677 CDS NP_300817.1 15836293 919531 856278..857018 1 NC_002491.1 hypothetical protein 857018 919531 CPj0760 Chlamydophila pneumoniae J138 hypothetical protein NP_300817.1 856278 D 138677 CDS NP_300818.1 15836294 919532 857025..857699 1 NC_002491.1 hypothetical protein 857699 919532 CPj0761 Chlamydophila pneumoniae J138 hypothetical protein NP_300818.1 857025 D 138677 CDS NP_300819.1 15836295 919533 complement(857857..858918) 1 NC_002491.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 858918 recA 919533 recA Chlamydophila pneumoniae J138 recombinase A NP_300819.1 857857 R 138677 CDS NP_300820.1 15836296 919535 complement(859290..859832) 1 NC_002491.1 formyltetrahydrofolate cycloligase 859832 ygfA 919535 ygfA Chlamydophila pneumoniae J138 formyltetrahydrofolate cycloligase NP_300820.1 859290 R 138677 CDS NP_300821.1 15836297 919536 complement(859842..861128) 1 NC_002491.1 hypothetical protein 861128 919536 CPj0764 Chlamydophila pneumoniae J138 hypothetical protein NP_300821.1 859842 R 138677 CDS NP_300822.1 15836298 919537 complement(861119..861703) 1 NC_002491.1 hypothetical protein 861703 919537 CPj0765 Chlamydophila pneumoniae J138 hypothetical protein NP_300822.1 861119 R 138677 CDS NP_300823.1 15836299 919539 complement(861712..863103) 1 NC_002491.1 hypothetical protein 863103 919539 CPj0766 Chlamydophila pneumoniae J138 hypothetical protein NP_300823.1 861712 R 138677 CDS NP_300824.1 15836300 919534 863205..863501 1 NC_002491.1 hypothetical protein 863501 919534 CPj0767 Chlamydophila pneumoniae J138 hypothetical protein NP_300824.1 863205 D 138677 CDS NP_300825.1 15836301 918778 863480..864487 1 NC_002491.1 oxidoreductase 864487 yohI 918778 yohI Chlamydophila pneumoniae J138 oxidoreductase NP_300825.1 863480 D 138677 CDS NP_300826.1 15836302 918777 complement(864439..867054) 1 NC_002491.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I/SWI domain fusion protein 867054 topA 918777 topA Chlamydophila pneumoniae J138 DNA topoisomerase I/SWI domain fusion protein NP_300826.1 864439 R 138677 CDS NP_300827.1 15836303 919538 867661..868455 1 NC_002491.1 hypothetical protein 868455 919538 CPj0770 Chlamydophila pneumoniae J138 hypothetical protein NP_300827.1 867661 D 138677 CDS NP_300828.1 15836304 919540 complement(868462..869784) 1 NC_002491.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 869784 rpoN 919540 rpoN Chlamydophila pneumoniae J138 RNA polymerase factor sigma-54 NP_300828.1 868462 R 138677 CDS NP_300829.1 15836305 919541 complement(869787..871706) 1 NC_002491.1 DNA helicase 871706 uvrD 919541 uvrD Chlamydophila pneumoniae J138 DNA helicase NP_300829.1 869787 R 138677 CDS NP_300830.1 15836306 919542 871809..872519 1 NC_002491.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 872519 ung 919542 ung Chlamydophila pneumoniae J138 uracil-DNA glycosylase NP_300830.1 871809 D 138677 CDS NP_300831.1 15836307 919543 872516..872749 1 NC_002491.1 hypothetical protein 872749 919543 CPj0774 Chlamydophila pneumoniae J138 hypothetical protein NP_300831.1 872516 D 138677 CDS NP_300832.1 15836308 919544 complement(872732..873352) 1 NC_002491.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 873352 yggV 919544 yggV Chlamydophila pneumoniae J138 deoxyribonucleotide triphosphate pyrophosphatase NP_300832.1 872732 R 138677 CDS NP_300833.1 15836309 919545 873567..874811 1 NC_002491.1 hypothetical protein 874811 919545 CPj0776 Chlamydophila pneumoniae J138 hypothetical protein NP_300833.1 873567 D 138677 CDS NP_300834.1 15836310 919546 874922..876502 1 NC_002491.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; molecular chaperone GroEL 876502 groEL 919546 groEL Chlamydophila pneumoniae J138 molecular chaperone GroEL NP_300834.1 874922 D 138677 CDS NP_300835.1 15836311 919548 876826..877416 1 NC_002491.1 thio-specific antioxidant (TSA) peroxidase 877416 ahpC 919548 ahpC Chlamydophila pneumoniae J138 thio-specific antioxidant (TSA) peroxidase NP_300835.1 876826 D 138677 CDS NP_300836.1 15836312 919549 complement(877413..877802) 1 NC_002491.1 hypothetical protein 877802 919549 CPj0779 Chlamydophila pneumoniae J138 hypothetical protein NP_300836.1 877413 R 138677 CDS NP_300837.1 15836313 919550 complement(877909..878526) 1 NC_002491.1 N-acetylmuramoyl-L-Ala amidase 878526 amiB 919550 amiB Chlamydophila pneumoniae J138 N-acetylmuramoyl-L-Ala amidase NP_300837.1 877909 R 138677 CDS NP_300838.1 15836314 919552 complement(878516..879094) 1 NC_002491.1 peptidoglycan-associated lipoprotein 879094 pal 919552 pal Chlamydophila pneumoniae J138 peptidoglycan-associated lipoprotein NP_300838.1 878516 R 138677 CDS NP_300839.1 15836315 919553 complement(879091..880386) 1 NC_002491.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 880386 tolB 919553 tolB Chlamydophila pneumoniae J138 translocation protein TolB NP_300839.1 879091 R 138677 CDS NP_300840.1 15836316 919554 complement(880418..881206) 1 NC_002491.1 hypothetical protein 881206 919554 CPj0783 Chlamydophila pneumoniae J138 hypothetical protein NP_300840.1 880418 R 138677 CDS NP_300841.1 15836317 919555 complement(881210..881617) 1 NC_002491.1 biopolymer transport protein 881617 exbD 919555 exbD Chlamydophila pneumoniae J138 biopolymer transport protein NP_300841.1 881210 R 138677 CDS NP_300842.1 15836318 919556 complement(881614..882312) 1 NC_002491.1 macromolecule transporter 882312 exbB 919556 exbB Chlamydophila pneumoniae J138 macromolecule transporter NP_300842.1 881614 R 138677 CDS NP_300843.1 15836319 918783 882506..884617 1 NC_002491.1 thio:disulfide interchange protein 884617 dsbD 918783 dsbD Chlamydophila pneumoniae J138 thio:disulfide interchange protein NP_300843.1 882506 D 138677 CDS NP_300844.1 15836320 918782 884940..885725 1 NC_002491.1 hydrolase 885725 yabD 918782 yabD Chlamydophila pneumoniae J138 hydrolase NP_300844.1 884940 D 138677 CDS NP_300845.1 15836321 918780 885863..886756 1 NC_002491.1 succinate dehydrogenase 886756 sdhC 918780 sdhC Chlamydophila pneumoniae J138 succinate dehydrogenase NP_300845.1 885863 D 138677 CDS NP_300846.1 15836322 918779 886760..888640 1 NC_002491.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 888640 sdhA 918779 sdhA Chlamydophila pneumoniae J138 succinate dehydrogenase flavoprotein subunit NP_300846.1 886760 D 138677 CDS NP_300847.1 15836323 919551 888651..889427 1 NC_002491.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 889427 sdhB 919551 sdhB Chlamydophila pneumoniae J138 succinate dehydrogenase iron-sulfur subunit NP_300847.1 888651 D 138677 CDS NP_300848.1 15836324 919557 complement(889429..892371) 1 NC_002491.1 hypothetical protein 892371 919557 CPj0791 Chlamydophila pneumoniae J138 hypothetical protein NP_300848.1 889429 R 138677 CDS NP_300849.1 15836325 919558 complement(892426..894240) 1 NC_002491.1 hypothetical protein 894240 919558 CPj0792 Chlamydophila pneumoniae J138 hypothetical protein NP_300849.1 892426 R 138677 CDS NP_300850.1 15836326 919560 complement(894237..896144) 1 NC_002491.1 RsbW antagonist; sigma regulatory family protein - PP2C phosphatase 896144 rbsU 919560 rbsU Chlamydophila pneumoniae J138 sigma regulatory family protein - PP2C phosphatase NP_300850.1 894237 R 138677 CDS NP_300851.1 15836327 919561 896495..897328 1 NC_002491.1 hypothetical protein 897328 919561 CPj0794 Chlamydophila pneumoniae J138 hypothetical protein NP_300851.1 896495 D 138677 CDS NP_300852.1 15836328 919562 897449..898519 1 NC_002491.1 hypothetical protein 898519 919562 CPj0795 Chlamydophila pneumoniae J138 hypothetical protein NP_300852.1 897449 D 138677 CDS NP_300853.1 15836329 919564 898622..900664 1 NC_002491.1 hypothetical protein 900664 919564 CPj0796 Chlamydophila pneumoniae J138 hypothetical protein NP_300853.1 898622 D 138677 CDS NP_300854.1 15836330 919565 900921..902018 1 NC_002491.1 hypothetical protein 902018 919565 CPj0797 Chlamydophila pneumoniae J138 hypothetical protein NP_300854.1 900921 D 138677 CDS NP_300855.1 15836331 919567 902167..903180 1 NC_002491.1 hypothetical protein 903180 919567 CPj0798 Chlamydophila pneumoniae J138 hypothetical protein NP_300855.1 902167 D 138677 CDS NP_300856.1 15836332 919566 complement(903258..904307) 1 NC_002491.1 hypothetical protein 904307 919566 CPj0799 Chlamydophila pneumoniae J138 hypothetical protein NP_300856.1 903258 R 138677 CDS NP_300857.1 15836333 919579 complement(904567..905853) 1 NC_002491.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 905853 eno 919579 eno Chlamydophila pneumoniae J138 phosphopyruvate hydratase NP_300857.1 904567 R 138677 CDS NP_300858.1 15836334 919563 complement(906045..908018) 1 NC_002491.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 908018 uvrB 919563 uvrB Chlamydophila pneumoniae J138 excinuclease ABC subunit B NP_300858.1 906045 R 138677 CDS NP_300859.1 15836335 919559 complement(908027..909061) 1 NC_002491.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 909061 trpS 919559 trpS Chlamydophila pneumoniae J138 tryptophanyl-tRNA synthetase NP_300859.1 908027 R 138677 CDS NP_300860.1 15836336 919568 complement(909070..909624) 1 NC_002491.1 hypothetical protein 909624 919568 CPj0803 Chlamydophila pneumoniae J138 hypothetical protein NP_300860.1 909070 R 138677 CDS NP_300861.1 15836337 919569 complement(909628..910380) 1 NC_002491.1 hypothetical protein 910380 gp6D 919569 gp6D Chlamydophila pneumoniae J138 hypothetical protein NP_300861.1 909628 R 138677 CDS NP_300862.1 15836338 919572 complement(910385..911152) 1 NC_002491.1 chromosome partitioning ATPase 911152 minD 919572 minD Chlamydophila pneumoniae J138 chromosome partitioning ATPase NP_300862.1 910385 R 138677 CDS NP_300863.1 15836339 919573 complement(911185..913092) 1 NC_002491.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 913092 thrS 919573 thrS Chlamydophila pneumoniae J138 threonyl-tRNA synthetase NP_300863.1 911185 R 138677 CDS NP_300864.1 15836340 919575 913292..914203 1 NC_002491.1 hypothetical protein 914203 919575 CPj0807 Chlamydophila pneumoniae J138 hypothetical protein NP_300864.1 913292 D 138677 CDS NP_300865.1 15836341 919577 complement(914274..915608) 1 NC_002491.1 hypothetical protein 915608 919577 CPj0808 Chlamydophila pneumoniae J138 hypothetical protein NP_300865.1 914274 R 138677 CDS NP_300866.1 15836342 919581 complement(915641..917107) 1 NC_002491.1 hypothetical protein 917107 919581 CPj0809 Chlamydophila pneumoniae J138 hypothetical protein NP_300866.1 915641 R 138677 CDS NP_300867.1 15836343 919582 complement(917144..917506) 1 NC_002491.1 hypothetical protein 917506 919582 CPj0810 Chlamydophila pneumoniae J138 hypothetical protein NP_300867.1 917144 R 138677 CDS NP_300868.1 15836344 919583 complement(917527..918222) 1 NC_002491.1 low calcium response protein H 918222 lcrH_1 919583 lcrH_1 Chlamydophila pneumoniae J138 low calcium response protein H NP_300868.1 917527 R 138677 CDS NP_300869.1 15836345 919584 918445..920187 1 NC_002491.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 920187 mutL 919584 mutL Chlamydophila pneumoniae J138 DNA mismatch repair protein NP_300869.1 918445 D 138677 CDS NP_300870.1 15836346 919580 920192..921259 1 NC_002491.1 aminopeptidase 921259 pepP 919580 pepP Chlamydophila pneumoniae J138 aminopeptidase NP_300870.1 920192 D 138677 CDS NP_300871.1 15836347 919578 921429..922682 1 NC_002491.1 hypothetical protein 922682 919578 CPj0814 Chlamydophila pneumoniae J138 hypothetical protein NP_300871.1 921429 D 138677 CDS NP_300872.1 15836348 919576 922683..924947 1 NC_002491.1 general secretion protein D 924947 gspD 919576 gspD Chlamydophila pneumoniae J138 general secretion protein D NP_300872.1 922683 D 138677 CDS NP_300873.1 15836349 919574 924937..926427 1 NC_002491.1 general secretion protein E 926427 gspE 919574 gspE Chlamydophila pneumoniae J138 general secretion protein E NP_300873.1 924937 D 138677 CDS NP_300874.1 15836350 919571 926437..927612 1 NC_002491.1 general secretion protein F 927612 gspF 919571 gspF Chlamydophila pneumoniae J138 general secretion protein F NP_300874.1 926437 D 138677 CDS NP_300875.1 15836351 919570 927636..928007 1 NC_002491.1 leader peptide; hypothetical protein 928007 919570 CPj0818 Chlamydophila pneumoniae J138 hypothetical protein NP_300875.1 927636 D 138677 CDS NP_300876.1 15836352 919586 928011..928457 1 NC_002491.1 hypothetical protein 928457 919586 CPj0819 Chlamydophila pneumoniae J138 hypothetical protein NP_300876.1 928011 D 138677 CDS NP_300877.1 15836353 919589 928442..928849 1 NC_002491.1 hypothetical protein 928849 919589 CPj0820 Chlamydophila pneumoniae J138 hypothetical protein NP_300877.1 928442 D 138677 CDS NP_300878.1 15836354 919591 928988..929992 1 NC_002491.1 hypothetical protein 929992 919591 CPj0821 Chlamydophila pneumoniae J138 hypothetical protein NP_300878.1 928988 D 138677 CDS NP_300879.1 15836355 919592 930077..930553 1 NC_002491.1 hypothetical protein 930553 919592 CPj0822 Chlamydophila pneumoniae J138 hypothetical protein NP_300879.1 930077 D 138677 CDS NP_300880.1 15836356 919590 complement(930819..931688) 1 NC_002491.1 YopT tranlocation T 931688 yscT 919590 yscT Chlamydophila pneumoniae J138 YopT tranlocation T NP_300880.1 930819 R 138677 CDS NP_300881.1 15836357 919588 complement(931696..931983) 1 NC_002491.1 YopS translocation protein 931983 yscS 919588 yscS Chlamydophila pneumoniae J138 YopS translocation protein NP_300881.1 931696 R 138677 CDS NP_300882.1 15836358 919587 complement(931995..932915) 1 NC_002491.1 type III secretion system protein 932915 yscR 919587 yscR Chlamydophila pneumoniae J138 type III secretion system protein NP_300882.1 931995 R 138677 CDS NP_300883.1 15836359 919585 complement(932930..933631) 1 NC_002491.1 type III secretion system protein 933631 yscL 919585 yscL Chlamydophila pneumoniae J138 type III secretion system protein NP_300883.1 932930 R 138677 CDS NP_300884.1 15836360 919593 complement(933752..934585) 1 NC_002491.1 hypothetical protein 934585 919593 CPj0827 Chlamydophila pneumoniae J138 hypothetical protein NP_300884.1 933752 R 138677 CDS NP_300885.1 15836361 919594 complement(934585..935592) 1 NC_002491.1 Yop translocation J 935592 yscJ 919594 yscJ Chlamydophila pneumoniae J138 Yop translocation J NP_300885.1 934585 R 138677 CDS NP_300886.1 15836362 919595 936065..936622 1 NC_002491.1 hypothetical protein 936622 919595 CPj0829 Chlamydophila pneumoniae J138 hypothetical protein NP_300886.1 936065 D 138677 CDS NP_300887.1 15836363 919596 936765..937283 1 NC_002491.1 hypothetical protein 937283 919596 CPj0830 Chlamydophila pneumoniae J138 hypothetical protein NP_300887.1 936765 D 138677 CDS NP_300888.1 15836364 919597 937588..937758 1 NC_002491.1 hypothetical protein 937758 919597 CPj0831 Chlamydophila pneumoniae J138 hypothetical protein NP_300888.1 937588 D 138677 CDS NP_300889.1 15836365 919598 complement(938145..939068) 1 NC_002491.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 939068 lipA 919598 lipA Chlamydophila pneumoniae J138 lipoyl synthase NP_300889.1 938145 R 138677 CDS NP_300890.1 15836366 919599 complement(939065..940450) 1 NC_002491.1 E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 940450 lpdA 919599 lpdA Chlamydophila pneumoniae J138 dihydrolipoamide dehydrogenase NP_300890.1 939065 R 138677 CDS NP_300891.1 15836367 919455 940874..941338 1 NC_002491.1 hypothetical protein 941338 919455 CPj0834 Chlamydophila pneumoniae J138 hypothetical protein NP_300891.1 940874 D 138677 CDS NP_300892.1 15836368 919454 complement(941363..945010) 1 NC_002491.1 SWI/SNF family helicase_1 945010 919454 CPj0835 Chlamydophila pneumoniae J138 SWI/SNF family helicase_1 NP_300892.1 941363 R 138677 CDS NP_300893.1 15836369 919448 complement(945040..946200) 1 NC_002491.1 branched-chain amino acid ABC transporter 946200 brnQ 919448 brnQ Chlamydophila pneumoniae J138 branched-chain amino acid ABC transporter NP_300893.1 945040 R 138677 CDS NP_300894.1 15836370 919453 complement(946463..947092) 1 NC_002491.1 endonuclease III 947092 nth 919453 nth Chlamydophila pneumoniae J138 endonuclease III NP_300894.1 946463 R 138677 CDS NP_300895.1 15836371 919600 complement(947099..948427) 1 NC_002491.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 948427 trmE 919600 trmE Chlamydophila pneumoniae J138 tRNA modification GTPase TrmE NP_300895.1 947099 R 138677 CDS NP_300896.1 15836372 919601 948578..949483 1 NC_002491.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 949483 psdD 919601 psdD Chlamydophila pneumoniae J138 phosphatidylserine decarboxylase NP_300896.1 948578 D 138677 CDS NP_300897.1 15836373 919602 949543..950868 1 NC_002491.1 hypothetical protein 950868 919602 CPj0840 Chlamydophila pneumoniae J138 hypothetical protein NP_300897.1 949543 D 138677 CDS NP_300898.1 15836374 919603 951052..953964 1 NC_002491.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 953964 secA 919603 secA Chlamydophila pneumoniae J138 preprotein translocase subunit SecA NP_300898.1 951052 D 138677 CDS NP_300899.1 15836375 919604 complement(954028..954204) 1 NC_002491.1 frame-shift with CPj0843; hypothetical protein 954204 919604 CPj0842 Chlamydophila pneumoniae J138 hypothetical protein NP_300899.1 954028 R 138677 CDS NP_300900.1 15836376 919605 complement(954312..954512) 1 NC_002491.1 hypothetical protein 954512 919605 CPj0843 Chlamydophila pneumoniae J138 hypothetical protein NP_300900.1 954312 R 138677 CDS NP_300901.1 15836377 919606 complement(954588..956051) 1 NC_002491.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 956051 engA 919606 engA Chlamydophila pneumoniae J138 GTP-binding protein EngA NP_300901.1 954588 R 138677 CDS NP_300902.1 15836378 919607 complement(956168..957400) 1 NC_002491.1 poly A polymerase 957400 pcnB_1 919607 pcnB_1 Chlamydophila pneumoniae J138 poly A polymerase NP_300902.1 956168 R 138677 CDS NP_300903.1 15836379 919608 complement(957430..958695) 1 NC_002491.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 958695 clpX 919608 clpX Chlamydophila pneumoniae J138 ATP-dependent protease ATP-binding subunit ClpX NP_300903.1 957430 R 138677 CDS NP_300904.1 15836380 919609 complement(958705..959316) 1 NC_002491.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 959316 clpP 919609 clpP Chlamydophila pneumoniae J138 ATP-dependent Clp protease proteolytic subunit NP_300904.1 958705 R 138677 CDS NP_300905.1 15836381 919610 complement(959495..960823) 1 NC_002491.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 960823 tig 919610 tig Chlamydophila pneumoniae J138 trigger factor NP_300905.1 959495 R 138677 CDS NP_300906.1 15836382 919612 961109..964609 1 NC_002491.1 SWI/SNF family helicase_2 964609 919612 CPj0849 Chlamydophila pneumoniae J138 SWI/SNF family helicase_2 NP_300906.1 961109 D 138677 CDS NP_300907.1 15836383 919613 964614..965714 1 NC_002491.1 rod shape-determining protein MreB 965714 mreB 919613 mreB Chlamydophila pneumoniae J138 rod shape-determining protein MreB NP_300907.1 964614 D 138677 CDS NP_300908.1 15836384 919614 965717..967519 1 NC_002491.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 967519 pckA 919614 pckA Chlamydophila pneumoniae J138 phosphoenolpyruvate carboxykinase NP_300908.1 965717 D 138677 CDS NP_300909.1 15836385 919615 967637..969937 1 NC_002491.1 hypothetical protein 969937 919615 CPj0852 Chlamydophila pneumoniae J138 hypothetical protein NP_300909.1 967637 D 138677 CDS NP_300910.1 15836386 919616 969958..971127 1 NC_002491.1 hypothetical protein 971127 919616 CPj0853 Chlamydophila pneumoniae J138 hypothetical protein NP_300910.1 969958 D 138677 CDS NP_300911.1 15836387 919617 complement(971124..972158) 1 NC_002491.1 hypothetical protein 972158 ompB 919617 ompB Chlamydophila pneumoniae J138 hypothetical protein NP_300911.1 971124 R 138677 CDS NP_300912.1 15836388 919618 complement(972312..973316) 1 NC_002491.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 973316 gpsA 919618 gpsA Chlamydophila pneumoniae J138 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase NP_300912.1 972312 R 138677 CDS NP_300913.1 15836389 919619 complement(973313..974698) 1 NC_002491.1 UDP-glucose pyrophosphorylase 974698 919619 CPj0856 Chlamydophila pneumoniae J138 UDP-glucose pyrophosphorylase NP_300913.1 973313 R 138677 CDS NP_300914.1 15836390 919620 complement(974710..975078) 1 NC_002491.1 hypothetical protein 975078 919620 CPj0857 Chlamydophila pneumoniae J138 hypothetical protein NP_300914.1 974710 R 138677 CDS NP_300915.1 15836391 919621 complement(975075..976376) 1 NC_002491.1 involved in type III protein export; type III secretion system ATPase 976376 fliI 919621 fliI Chlamydophila pneumoniae J138 type III secretion system ATPase NP_300915.1 975075 R 138677 CDS NP_300916.1 15836392 919622 complement(976373..976909) 1 NC_002491.1 hypothetical protein 976909 919622 CPj0859 Chlamydophila pneumoniae J138 hypothetical protein NP_300916.1 976373 R 138677 CDS NP_300917.1 15836393 919623 complement(976926..977951) 1 NC_002491.1 type III secretion system protein 977951 fliF 919623 fliF Chlamydophila pneumoniae J138 type III secretion system protein NP_300917.1 976926 R 138677 CDS NP_300918.1 15836394 919624 complement(978243..979043) 1 NC_002491.1 NifU-like protein 979043 919624 CPj0861 Chlamydophila pneumoniae J138 NifU-like protein NP_300918.1 978243 R 138677 CDS NP_300919.1 15836395 919625 complement(979040..980194) 1 NC_002491.1 NifS-related aminotransferase 980194 yfhO_2 919625 yfhO_2 Chlamydophila pneumoniae J138 NifS-related aminotransferase NP_300919.1 979040 R 138677 CDS NP_300920.1 15836396 919626 complement(980149..980835) 1 NC_002491.1 catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 980835 pgmA 919626 pgmA Chlamydophila pneumoniae J138 phosphoglyceromutase NP_300920.1 980149 R 138677 CDS NP_300921.1 15836397 919627 980991..981698 1 NC_002491.1 pseudouridine synthase 981698 yjbC 919627 yjbC Chlamydophila pneumoniae J138 pseudouridine synthase NP_300921.1 980991 D 138677 CDS NP_300922.1 15836398 919628 981739..982266 1 NC_002491.1 hypothetical protein 982266 919628 CPj0865 Chlamydophila pneumoniae J138 hypothetical protein NP_300922.1 981739 D 138677 CDS NP_300923.1 15836399 919629 complement(982234..982812) 1 NC_002491.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 982812 birA 919629 birA Chlamydophila pneumoniae J138 biotin--protein ligase NP_300923.1 982234 R 138677 CDS NP_300924.1 15836400 919630 982744..983991 1 NC_002491.1 rod shape protein 983991 rodA 919630 rodA Chlamydophila pneumoniae J138 rod shape protein NP_300924.1 982744 D 138677 CDS NP_300925.1 15836401 919631 complement(983988..985964) 1 NC_002491.1 metal transport P-type ATPase 985964 zntA 919631 zntA Chlamydophila pneumoniae J138 metal transport P-type ATPase NP_300925.1 983988 R 138677 CDS NP_300926.1 15836402 919632 complement(985976..986722) 1 NC_002491.1 hypothetical protein 986722 919632 CPj0869 Chlamydophila pneumoniae J138 hypothetical protein NP_300926.1 985976 R 138677 CDS NP_300927.1 15836403 919633 complement(986766..988049) 1 NC_002491.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 988049 serS 919633 serS Chlamydophila pneumoniae J138 seryl-tRNA synthetase NP_300927.1 986766 R 138677 CDS NP_300928.1 15836404 919634 988093..989223 1 NC_002491.1 riboflavin deaminase 989223 ribD 919634 ribD Chlamydophila pneumoniae J138 riboflavin deaminase NP_300928.1 988093 D 138677 CDS NP_300929.1 15836405 919635 989284..990540 1 NC_002491.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 990540 ribA_ribB 919635 ribA_ribB Chlamydophila pneumoniae J138 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein NP_300929.1 989284 D 138677 CDS NP_300930.1 15836406 919636 990554..991018 1 NC_002491.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 991018 ribH 919636 ribH Chlamydophila pneumoniae J138 6,7-dimethyl-8-ribityllumazine synthase NP_300930.1 990554 D 138677 CDS NP_300931.1 15836407 919637 complement(991067..992428) 1 NC_002491.1 hypothetical protein 992428 919637 CPj0874 Chlamydophila pneumoniae J138 hypothetical protein NP_300931.1 991067 R 138677 CDS NP_300932.1 15836408 919638 992693..993346 1 NC_002491.1 hypothetical protein 993346 919638 CPj0875 Chlamydophila pneumoniae J138 hypothetical protein NP_300932.1 992693 D 138677 CDS NP_300933.1 15836409 919639 993465..994841 1 NC_002491.1 D-alanine/glycine permease 994841 dagA_2 919639 dagA_2 Chlamydophila pneumoniae J138 D-alanine/glycine permease NP_300933.1 993465 D 138677 CDS NP_300934.1 15836410 919640 994854..995306 1 NC_002491.1 hypothetical protein 995306 ybcL 919640 ybcL Chlamydophila pneumoniae J138 hypothetical protein NP_300934.1 994854 D 138677 CDS NP_300935.1 15836411 919641 complement(995310..995975) 1 NC_002491.1 SET domain-containing protein 995975 919641 CPj0878 Chlamydophila pneumoniae J138 SET domain-containing protein NP_300935.1 995310 R 138677 CDS NP_300936.1 15836412 919642 complement(995963..996760) 1 NC_002491.1 metal dependent hydrolase 996760 yycJ 919642 yycJ Chlamydophila pneumoniae J138 metal dependent hydrolase NP_300936.1 995963 R 138677 CDS NP_300937.1 15836413 919643 complement(996762..999182) 1 NC_002491.1 DNA translocase FtsK 999182 ftsK 919643 ftsK Chlamydophila pneumoniae J138 DNA translocase FtsK NP_300937.1 996762 R 138677 CDS NP_300938.1 15836414 919645 1004988..1005533 1 NC_002491.1 hypothetical protein 1005533 919645 CPj0881 Chlamydophila pneumoniae J138 hypothetical protein NP_300938.1 1004988 D 138677 CDS NP_300939.1 15836415 919646 1005589..1006728 1 NC_002491.1 hypothetical protein 1006728 919646 CPj0882 Chlamydophila pneumoniae J138 hypothetical protein NP_300939.1 1005589 D 138677 CDS NP_300940.1 15836416 919647 complement(1006891..1008186) 1 NC_002491.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 1008186 nqr6 919647 nqr6 Chlamydophila pneumoniae J138 Na(+)-translocating NADH-quinone reductase subunit F NP_300940.1 1006891 R 138677 CDS NP_300941.1 15836417 919648 complement(1008327..1008680) 1 NC_002491.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 1008680 yajC 919648 yajC Chlamydophila pneumoniae J138 preprotein translocase subunit YajC NP_300941.1 1008327 R 138677 CDS NP_300942.1 15836418 919649 complement(1008751..1009956) 1 NC_002491.1 rRNA methyltransferse 1009956 ygcA 919649 ygcA Chlamydophila pneumoniae J138 rRNA methyltransferse NP_300942.1 1008751 R 138677 CDS NP_300943.1 15836419 919650 complement(1010226..1010597) 1 NC_002491.1 histone-like developmental protein 1010597 hctA 919650 hctA Chlamydophila pneumoniae J138 histone-like developmental protein NP_300943.1 1010226 R 138677 CDS NP_300944.1 15836420 919651 1011013..1013481 1 NC_002491.1 hypothetical protein 1013481 919651 CPj0887 Chlamydophila pneumoniae J138 hypothetical protein NP_300944.1 1011013 D 138677 CDS NP_300945.1 15836421 919652 complement(1013437..1014744) 1 NC_002491.1 catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX; protoporphyrinogen oxidase 1014744 hemG 919652 hemG Chlamydophila pneumoniae J138 protoporphyrinogen oxidase NP_300945.1 1013437 R 138677 CDS NP_300946.1 15836422 919653 complement(1014780..1016156) 1 NC_002491.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1016156 hemN_2 919653 hemN_2 Chlamydophila pneumoniae J138 coproporphyrinogen III oxidase NP_300946.1 1014780 R 138677 CDS NP_300947.1 15836423 919654 complement(1016137..1017126) 1 NC_002491.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 1017126 hemE 919654 hemE Chlamydophila pneumoniae J138 uroporphyrinogen decarboxylase NP_300947.1 1016137 R 138677 CDS NP_300948.1 15836424 919655 complement(1017137..1020394) 1 NC_002491.1 transcription-repair coupling factor 1020394 mfd 919655 mfd Chlamydophila pneumoniae J138 transcription-repair coupling factor NP_300948.1 1017137 R 138677 CDS NP_300949.1 15836425 919656 complement(1020364..1022982) 1 NC_002491.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1022982 alaS 919656 alaS Chlamydophila pneumoniae J138 alanyl-tRNA synthetase NP_300949.1 1020364 R 138677 CDS NP_300950.1 15836426 919657 1023215..1025212 1 NC_002491.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 1025212 tktB_1 919657 tktB_1 Chlamydophila pneumoniae J138 transketolase NP_300950.1 1023215 D 138677 CDS NP_300951.1 15836427 919658 complement(1025206..1026087) 1 NC_002491.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 1026087 amn 919658 amn Chlamydophila pneumoniae J138 AMP nucleosidase NP_300951.1 1025206 R 138677 CDS NP_300952.1 15836428 919659 1026309..1026881 1 NC_002491.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 1026881 efp_2 919659 efp_2 Chlamydophila pneumoniae J138 elongation factor P NP_300952.1 1026309 D 138677 CDS NP_300953.1 15836429 919660 1026916..1027146 1 NC_002491.1 hypothetical protein 1027146 919660 CPj0896 Chlamydophila pneumoniae J138 hypothetical protein NP_300953.1 1026916 D 138677 CDS NP_300954.1 15836430 919661 complement(1027171..1028058) 1 NC_002491.1 phosphohydrolase 1028058 919661 CPj0897 Chlamydophila pneumoniae J138 phosphohydrolase NP_300954.1 1027171 R 138677 CDS NP_300955.1 15836431 919662 complement(1028222..1029781) 1 NC_002491.1 heat shock protein-60 1029781 groEL_3 919662 groEL_3 Chlamydophila pneumoniae J138 heat shock protein-60 NP_300955.1 1028222 R 138677 CDS NP_300956.1 15836432 919664 1030196..1031539 1 NC_002491.1 muramoyl-DAP ligase 1031539 murF 919664 murF Chlamydophila pneumoniae J138 muramoyl-DAP ligase NP_300956.1 1030196 D 138677 CDS NP_300957.1 15836433 919665 1031556..1032605 1 NC_002491.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1032605 mraY 919665 mraY Chlamydophila pneumoniae J138 phospho-N-acetylmuramoyl-pentapeptide- transferase NP_300957.1 1031556 D 138677 CDS NP_300958.1 15836434 919666 1032608..1033861 1 NC_002491.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 1033861 murD 919666 murD Chlamydophila pneumoniae J138 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase NP_300958.1 1032608 D 138677 CDS NP_300959.1 15836435 919667 1033864..1034565 1 NC_002491.1 invasin repeat family; muramidase 1034565 nlpD 919667 nlpD Chlamydophila pneumoniae J138 muramidase NP_300959.1 1033864 D 138677 CDS NP_300960.1 15836436 919668 1034584..1035741 1 NC_002491.1 cell division protein ftsW 1035741 ftsW 919668 ftsW Chlamydophila pneumoniae J138 cell division protein ftsW NP_300960.1 1034584 D 138677 CDS NP_300961.1 15836437 919669 1035647..1036720 1 NC_002491.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1036720 murG 919669 murG Chlamydophila pneumoniae J138 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase NP_300961.1 1035647 D 138677 CDS NP_300962.1 15836438 919670 1036730..1039159 1 NC_002491.1 catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine and catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase 1039159 murC_ddlA 919670 murC_ddlA Chlamydophila pneumoniae J138 bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase NP_300962.1 1036730 D 138677 CDS NP_300963.1 15836439 919671 complement(1039233..1039661) 1 NC_002491.1 hypothetical protein 1039661 919671 CPj0906 Chlamydophila pneumoniae J138 hypothetical protein NP_300963.1 1039233 R 138677 CDS NP_300964.1 15836440 919672 complement(1039763..1040101) 1 NC_002491.1 divalent cation tolerance protein 1040101 cutA 919672 cutA Chlamydophila pneumoniae J138 divalent cation tolerance protein NP_300964.1 1039763 R 138677 CDS NP_300965.1 15836441 919673 complement(1040098..1040910) 1 NC_002491.1 hypothetical protein 1040910 919673 CPj0908 Chlamydophila pneumoniae J138 hypothetical protein NP_300965.1 1040098 R 138677 CDS NP_300966.1 15836442 919674 1040958..1041290 1 NC_002491.1 sigma regulatory factor 1041290 rsbV_2 919674 rsbV_2 Chlamydophila pneumoniae J138 sigma regulatory factor NP_300966.1 1040958 D 138677 CDS NP_300967.1 15836443 919675 1041300..1042328 1 NC_002491.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 1042328 miaA 919675 miaA Chlamydophila pneumoniae J138 tRNA delta(2)-isopentenylpyrophosphate transferase NP_300967.1 1041300 D 138677 CDS NP_300968.1 15836444 919676 complement(1042303..1043364) 1 NC_002491.1 hypothetical protein 1043364 919676 CPj0911 Chlamydophila pneumoniae J138 hypothetical protein NP_300968.1 1042303 R 138677 CDS NP_300969.1 15836445 919677 1043450..1045111 1 NC_002491.1 hypothetical protein 1045111 919677 CPj0912 Chlamydophila pneumoniae J138 hypothetical protein NP_300969.1 1043450 D 138677 CDS NP_300970.1 15836446 919678 1045108..1045296 1 NC_002491.1 hypothetical protein 1045296 919678 CPj0913 Chlamydophila pneumoniae J138 hypothetical protein NP_300970.1 1045108 D 138677 CDS NP_300971.1 15836447 919679 1045347..1045748 1 NC_002491.1 hypothetical protein 1045748 919679 CPj0914 Chlamydophila pneumoniae J138 hypothetical protein NP_300971.1 1045347 D 138677 CDS NP_300972.1 15836448 919680 1045809..1046168 1 NC_002491.1 iojap superfamily protein 1046168 ybeB 919680 ybeB Chlamydophila pneumoniae J138 iojap superfamily protein NP_300972.1 1045809 D 138677 CDS NP_300973.1 15836449 919681 1046185..1047435 1 NC_002491.1 FabF, beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-ACP synthase 1047435 fabF 919681 fabF Chlamydophila pneumoniae J138 3-oxoacyl-ACP synthase NP_300973.1 1046185 D 138677 CDS NP_300974.1 15836450 919682 1047438..1047890 1 NC_002491.1 hydrolase/phosphatase-like protein 1047890 919682 CPj0917 Chlamydophila pneumoniae J138 hydrolase/phosphatase-like protein NP_300974.1 1047438 D 138677 CDS NP_300975.1 15836451 919683 complement(1047924..1048571) 1 NC_002491.1 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 1048571 ppa 919683 ppa Chlamydophila pneumoniae J138 inorganic pyrophosphatase NP_300975.1 1047924 R 138677 CDS NP_300976.1 15836452 919684 1048726..1049781 1 NC_002491.1 leucine dehydrogenase 1049781 ldh 919684 ldh Chlamydophila pneumoniae J138 leucine dehydrogenase NP_300976.1 1048726 D 138677 CDS NP_300977.1 15836453 919685 complement(1049776..1050753) 1 NC_002491.1 sulfite synthesis/biphosphate phosphatase 1050753 cysQ 919685 cysQ Chlamydophila pneumoniae J138 sulfite synthesis/biphosphate phosphatase NP_300977.1 1049776 R 138677 CDS NP_300978.1 15836454 919686 1050883..1051644 1 NC_002491.1 snglycerol-3-P acyltransferase 1051644 919686 CPj0921 Chlamydophila pneumoniae J138 snglycerol-3-P acyltransferase NP_300978.1 1050883 D 138677 CDS NP_300979.1 15836455 919687 1051662..1053278 1 NC_002491.1 Synthesizes thioester adducts of fatty acids enzymatically to the phosphopantetheine group of acyl carrier protein; long chain fatty acid--ACP ligase 1053278 aas 919687 aas Chlamydophila pneumoniae J138 long chain fatty acid--ACP ligase NP_300979.1 1051662 D 138677 CDS NP_300980.1 15836456 919843 1053332..1054444 1 NC_002491.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 1054444 bioF_1 919843 bioF_1 Chlamydophila pneumoniae J138 8-amino-7-oxononanoate synthase NP_300980.1 1053332 D 138677 CDS NP_300981.1 15836457 919842 complement(1054373..1056622) 1 NC_002491.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 1056622 priA 919842 priA Chlamydophila pneumoniae J138 primosome assembly protein PriA NP_300981.1 1054373 R 138677 CDS NP_300982.1 15836458 919841 complement(1056571..1057248) 1 NC_002491.1 hypothetical protein 1057248 919841 CPj0925 Chlamydophila pneumoniae J138 hypothetical protein NP_300982.1 1056571 R 138677 CDS NP_300983.1 15836459 919688 1057408..1057908 1 NC_002491.1 thioredoxin 1057908 919688 CPj0926 Chlamydophila pneumoniae J138 thioredoxin NP_300983.1 1057408 D 138677 CDS NP_300984.1 15836460 919689 complement(1058015..1059157) 1 NC_002491.1 hypothetical protein 1059157 919689 CPj0927 Chlamydophila pneumoniae J138 hypothetical protein NP_300984.1 1058015 R 138677 CDS NP_300985.1 15836461 919690 complement(1059229..1060356) 1 NC_002491.1 hypothetical protein 1060356 919690 CPj0928 Chlamydophila pneumoniae J138 hypothetical protein NP_300985.1 1059229 R 138677 CDS NP_300986.1 15836462 919691 complement(1060531..1061640) 1 NC_002491.1 hypothetical protein 1061640 919691 CPj0929 Chlamydophila pneumoniae J138 hypothetical protein NP_300986.1 1060531 R 138677 CDS NP_300987.1 15836463 919692 1062206..1062682 1 NC_002491.1 hypothetical protein 1062682 919692 CPj0930 Chlamydophila pneumoniae J138 hypothetical protein NP_300987.1 1062206 D 138677 CDS NP_300988.1 15836464 919693 1063487..1065070 1 NC_002491.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 1065070 lysS 919693 lysS Chlamydophila pneumoniae J138 lysyl-tRNA synthetase NP_300988.1 1063487 D 138677 CDS NP_300989.1 15836465 919694 complement(1065067..1066491) 1 NC_002491.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1066491 cysS 919694 cysS Chlamydophila pneumoniae J138 cysteinyl-tRNA synthetase NP_300989.1 1065067 R 138677 CDS NP_300990.1 15836466 919695 1066884..1067930 1 NC_002491.1 disulfide bond isomerase 1067930 919695 CPj0933 Chlamydophila pneumoniae J138 disulfide bond isomerase NP_300990.1 1066884 D 138677 CDS NP_300991.1 15836467 919696 complement(1067872..1068291) 1 NC_002491.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 1068291 rnpA 919696 rnpA Chlamydophila pneumoniae J138 ribonuclease P NP_300991.1 1067872 R 138677 CDS NP_300992.1 15836468 919697 complement(1068303..1068440) 1 NC_002491.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 1068440 rpmH 919697 rpmH Chlamydophila pneumoniae J138 50S ribosomal protein L34 NP_300992.1 1068303 R 138677 CDS NP_300993.1 15836469 919698 1068685..1068822 1 NC_002491.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 1068822 rpmJ 919698 rpmJ Chlamydophila pneumoniae J138 50S ribosomal protein L36 NP_300993.1 1068685 D 138677 CDS NP_300994.1 15836470 919699 1068845..1069150 1 NC_002491.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 1069150 rpsN 919699 rpsN Chlamydophila pneumoniae J138 30S ribosomal protein S14 NP_300994.1 1068845 D 138677 CDS NP_300995.1 15836471 919700 complement(1069195..1069671) 1 NC_002491.1 leader peptide-periplasmic; hypothetical protein 1069671 919700 CPj0938 Chlamydophila pneumoniae J138 hypothetical protein NP_300995.1 1069195 R 138677 CDS NP_300996.1 15836472 919701 1070077..1070547 1 NC_002491.1 hypothetical protein 1070547 919701 CPj0939 Chlamydophila pneumoniae J138 hypothetical protein NP_300996.1 1070077 D 138677 CDS NP_300997.1 15836473 919702 complement(1070550..1072361) 1 NC_002491.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1072361 uvrC 919702 uvrC Chlamydophila pneumoniae J138 excinuclease ABC subunit C NP_300997.1 1070550 R 138677 CDS NP_300998.1 15836474 919703 complement(1072364..1074850) 1 NC_002491.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1074850 mutS 919703 mutS Chlamydophila pneumoniae J138 DNA mismatch repair protein MutS NP_300998.1 1072364 R 138677 CDS NP_300999.1 15836475 919704 1075334..1077106 1 NC_002491.1 synthesizes RNA primers at the replication forks; DNA primase 1077106 dnaG 919704 dnaG Chlamydophila pneumoniae J138 DNA primase NP_300999.1 1075334 D 138677 CDS NP_301000.1 15836476 919705 1077327..1077590 1 NC_002491.1 hypothetical protein 1077590 919705 CPj0943 Chlamydophila pneumoniae J138 hypothetical protein NP_301000.1 1077327 D 138677 CDS NP_301001.1 15836477 919706 1077861..1078349 1 NC_002491.1 hypothetical protein 1078349 919706 CPj0944 Chlamydophila pneumoniae J138 hypothetical protein NP_301001.1 1077861 D 138677 CDS NP_301002.1 15836478 919707 1078419..1079012 1 NC_002491.1 hypothetical protein 1079012 919707 CPj0945 Chlamydophila pneumoniae J138 hypothetical protein NP_301002.1 1078419 D 138677 CDS NP_301003.1 15836479 919708 complement(1079091..1082135) 1 NC_002491.1 glycyl tRNA synthetase 1082135 glyQ 919708 glyQ Chlamydophila pneumoniae J138 glycyl tRNA synthetase NP_301003.1 1079091 R 138677 CDS NP_301004.1 15836480 919709 1082791..1083411 1 NC_002491.1 glycerol-3-P phosphatydyltransferase 1083411 pgsA_2 919709 pgsA_2 Chlamydophila pneumoniae J138 glycerol-3-P phosphatydyltransferase NP_301004.1 1082791 D 138677 CDS NP_301005.1 15836481 919710 complement(1083393..1084823) 1 NC_002491.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 1084823 glgA 919710 glgA Chlamydophila pneumoniae J138 glycogen synthase NP_301005.1 1083393 R 138677 CDS NP_301006.1 15836482 919714 1085278..1085835 1 NC_002491.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 1085835 ctc 919714 ctc Chlamydophila pneumoniae J138 50S ribosomal protein L25 NP_301006.1 1085278 D 138677 CDS NP_301007.1 15836483 919713 1085837..1086379 1 NC_002491.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 1086379 pth 919713 pth Chlamydophila pneumoniae J138 peptidyl-tRNA hydrolase NP_301007.1 1085837 D 138677 CDS NP_301008.1 15836484 919712 1086471..1086809 1 NC_002491.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 1086809 rpsF 919712 rpsF Chlamydophila pneumoniae J138 30S ribosomal protein S6 NP_301008.1 1086471 D 138677 CDS NP_301009.1 15836485 919053 1086827..1087075 1 NC_002491.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 1087075 rpsR 919053 rpsR Chlamydophila pneumoniae J138 30S ribosomal protein S18 NP_301009.1 1086827 D 138677 CDS NP_301010.1 15836486 919715 1087091..1087600 1 NC_002491.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 1087600 rplI 919715 rplI Chlamydophila pneumoniae J138 50S ribosomal protein L9 NP_301010.1 1087091 D 138677 CDS NP_301011.1 15836487 919718 1087635..1088060 1 NC_002491.1 catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1088060 919718 CPj0954 Chlamydophila pneumoniae J138 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase NP_301011.1 1087635 D 138677 CDS NP_301012.1 15836488 919720 1087994..1088527 1 NC_002491.1 hypothetical protein 1088527 919720 CPj0955 Chlamydophila pneumoniae J138 hypothetical protein NP_301012.1 1087994 D 138677 CDS NP_301013.1 15836489 919719 1088909..1090261 1 NC_002491.1 hypothetical protein 1090261 919719 CPj0956 Chlamydophila pneumoniae J138 hypothetical protein NP_301013.1 1088909 D 138677 CDS NP_301014.1 15836490 919717 complement(1090309..1093137) 1 NC_002491.1 insulinase/protease III 1093137 ide 919717 ide Chlamydophila pneumoniae J138 insulinase/protease III NP_301014.1 1090309 R 138677 CDS NP_301015.1 15836491 919716 complement(1093139..1094134) 1 NC_002491.1 glycerol-3-P acyltransferase 1094134 plsB 919716 plsB Chlamydophila pneumoniae J138 glycerol-3-P acyltransferase NP_301015.1 1093139 R 138677 CDS NP_301016.1 15836492 919724 complement(1094145..1095692) 1 NC_002491.1 axial filament protein 1095692 cafE 919724 cafE Chlamydophila pneumoniae J138 axial filament protein NP_301016.1 1094145 R 138677 CDS NP_301017.1 15836493 919723 1096113..1096454 1 NC_002491.1 hypothetical protein 1096454 919723 CPj0960 Chlamydophila pneumoniae J138 hypothetical protein NP_301017.1 1096113 D 138677 CDS NP_301018.1 15836494 919722 1096467..1096649 1 NC_002491.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1096649 rpmF 919722 rpmF Chlamydophila pneumoniae J138 50S ribosomal protein L32 NP_301018.1 1096467 D 138677 CDS NP_301019.1 15836495 919721 1096665..1097627 1 NC_002491.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1097627 plsX 919721 plsX Chlamydophila pneumoniae J138 glycerol-3-phosphate acyltransferase PlsX NP_301019.1 1096665 D 138677 CDS NP_301020.1 15836496 919728 1097747..1102576 1 NC_002491.1 hypothetical protein 1102576 pmp_21 919728 pmp_21 Chlamydophila pneumoniae J138 hypothetical protein NP_301020.1 1097747 D 138677 CDS NP_301021.1 15836497 919727 complement(1102647..1104107) 1 NC_002491.1 hypothetical protein 1104107 919727 CPj0964 Chlamydophila pneumoniae J138 hypothetical protein NP_301021.1 1102647 R 138677 CDS NP_301022.1 15836498 919726 complement(1104271..1106085) 1 NC_002491.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate; lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 1106085 lpxB 919726 lpxB Chlamydophila pneumoniae J138 lipid-A-disaccharide synthase NP_301022.1 1104271 R 138677 CDS NP_301023.1 15836499 919733 complement(1106094..1107386) 1 NC_002491.1 poly A polymerase 1107386 pcnB_2 919733 pcnB_2 Chlamydophila pneumoniae J138 poly A polymerase NP_301023.1 1106094 R 138677 CDS NP_301024.1 15836500 919732 1107861..1109237 1 NC_002491.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 1109237 glmM 919732 glmM Chlamydophila pneumoniae J138 phosphoglucosamine mutase NP_301024.1 1107861 D 138677 CDS NP_301025.1 15836501 919731 1109244..1111073 1 NC_002491.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 1111073 glmS 919731 glmS Chlamydophila pneumoniae J138 glucosamine--fructose-6-phosphate aminotransferase NP_301025.1 1109244 D 138677 CDS NP_301026.1 15836502 919730 1111161..1112351 1 NC_002491.1 tyrosine transport 1112351 tyrP_1 919730 tyrP_1 Chlamydophila pneumoniae J138 tyrosine transport NP_301026.1 1111161 D 138677 CDS NP_301027.1 15836503 919737 1112402..1113118 1 NC_002491.1 transport permease 1113118 yccA_2 919737 yccA_2 Chlamydophila pneumoniae J138 transport permease NP_301027.1 1112402 D 138677 CDS NP_301028.1 15836504 919735 complement(1113127..1113999) 1 NC_002491.1 cell division protein ftsY 1113999 ftsY 919735 ftsY Chlamydophila pneumoniae J138 cell division protein ftsY NP_301028.1 1113127 R 138677 CDS NP_301029.1 15836505 919739 1114070..1115230 1 NC_002491.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 1115230 sucC 919739 sucC Chlamydophila pneumoniae J138 succinyl-CoA synthetase subunit beta NP_301029.1 1114070 D 138677 CDS NP_301030.1 15836506 919738 1115244..1116125 1 NC_002491.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 1116125 sucD 919738 sucD Chlamydophila pneumoniae J138 succinyl-CoA synthetase subunit alpha NP_301030.1 1115244 D 138677 CDS NP_301031.1 15836507 919734 1116804..1117340 1 NC_002491.1 hypothetical protein 1117340 919734 CPj0975 Chlamydophila pneumoniae J138 hypothetical protein NP_301031.1 1116804 D 138677 CDS NP_301032.1 15836508 919736 1117784..1118890 1 NC_002491.1 hypothetical protein 1118890 919736 CPj0976 Chlamydophila pneumoniae J138 hypothetical protein NP_301032.1 1117784 D 138677 CDS NP_301033.1 15836509 919741 1119073..1120107 1 NC_002491.1 hypothetical protein 1120107 919741 CPj0977 Chlamydophila pneumoniae J138 hypothetical protein NP_301033.1 1119073 D 138677 CDS NP_301034.1 15836510 919746 1120385..1121851 1 NC_002491.1 DO serine protease 1121851 htrA 919746 htrA Chlamydophila pneumoniae J138 DO serine protease NP_301034.1 1120385 D 138677 CDS NP_301035.1 15836511 919745 complement(1121906..1123387) 1 NC_002491.1 hypothetical protein 1123387 919745 CPj0980 Chlamydophila pneumoniae J138 hypothetical protein NP_301035.1 1121906 R 138677 CDS NP_301036.1 15836512 919744 1123436..1126360 1 NC_002491.1 insulinase; zinc metalloprotease 1126360 919744 CPj0981 Chlamydophila pneumoniae J138 zinc metalloprotease NP_301036.1 1123436 D 138677 CDS NP_301037.1 15836513 919742 complement(1126364..1127599) 1 NC_002491.1 hypothetical protein 1127599 yigN 919742 yigN Chlamydophila pneumoniae J138 hypothetical protein NP_301037.1 1126364 R 138677 CDS NP_301038.1 15836514 919743 complement(1127608..1128405) 1 NC_002491.1 glycerol-serine phosphatidyltransferase 1128405 pssA 919743 pssA Chlamydophila pneumoniae J138 glycerol-serine phosphatidyltransferase NP_301038.1 1127608 R 138677 CDS NP_301039.1 15836515 919750 1128784..1131918 1 NC_002491.1 catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1131918 nrdA 919750 nrdA Chlamydophila pneumoniae J138 ribonucleotide-diphosphate reductase subunit alpha NP_301039.1 1128784 D 138677 CDS NP_301040.1 15836516 919749 1131939..1132979 1 NC_002491.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 1132979 nrdB 919749 nrdB Chlamydophila pneumoniae J138 ribonucleotide-diphosphate reductase subunit beta NP_301040.1 1131939 D 138677 CDS NP_301041.1 15836517 919748 1133129..1133803 1 NC_002491.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 1133803 trmB 919748 trmB Chlamydophila pneumoniae J138 tRNA (guanine-N(7)-)-methyltransferase NP_301041.1 1133129 D 138677 CDS NP_301042.1 15836518 919754 1133921..1134523 1 NC_002491.1 rRNA methylase 1134523 ytgB_2 919754 ytgB_2 Chlamydophila pneumoniae J138 rRNA methylase NP_301042.1 1133921 D 138677 CDS NP_301043.1 15836519 919755 complement(1134477..1135391) 1 NC_002491.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 1135391 murB 919755 murB Chlamydophila pneumoniae J138 UDP-N-acetylenolpyruvoylglucosamine reductase NP_301043.1 1134477 R 138677 CDS NP_301044.1 15836520 919757 complement(1135418..1135900) 1 NC_002491.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 1135900 nusB 919757 nusB Chlamydophila pneumoniae J138 transcription antitermination protein NusB NP_301044.1 1135418 R 138677 CDS NP_301045.1 15836521 919758 1136289..1136849 1 NC_002491.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 1136849 infC 919758 infC Chlamydophila pneumoniae J138 translation initiation factor IF-3 NP_301045.1 1136289 D 138677 CDS NP_301046.1 15836522 919759 1136827..1137021 1 NC_002491.1 50S ribosomal protein L35 1137021 rpmI 919759 rpmI Chlamydophila pneumoniae J138 50S ribosomal protein L35 NP_301046.1 1136827 D 138677 CDS NP_301047.1 15836523 919760 1137040..1137405 1 NC_002491.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1137405 rplT 919760 rplT Chlamydophila pneumoniae J138 50S ribosomal protein L20 NP_301047.1 1137040 D 138677 CDS NP_301048.1 15836524 919761 1137420..1138439 1 NC_002491.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1138439 pheS 919761 pheS Chlamydophila pneumoniae J138 phenylalanyl-tRNA synthetase subunit alpha NP_301048.1 1137420 D 138677 CDS NP_301049.1 15836525 919763 1138804..1140849 1 NC_002491.1 hypothetical protein 1140849 919763 CPj0994 Chlamydophila pneumoniae J138 hypothetical protein NP_301049.1 1138804 D 138677 CDS NP_301050.1 15836526 919764 complement(1140818..1141918) 1 NC_002491.1 hypothetical protein 1141918 919764 CPj0995 Chlamydophila pneumoniae J138 hypothetical protein NP_301050.1 1140818 R 138677 CDS NP_301051.1 15836527 919765 complement(1141922..1142995) 1 NC_002491.1 hypothetical protein 1142995 919765 CPj0996 Chlamydophila pneumoniae J138 hypothetical protein NP_301051.1 1141922 R 138677 CDS NP_301052.1 15836528 919766 1143114..1144073 1 NC_002491.1 PP-loop superfamily ATPase 1144073 mesJ 919766 mesJ Chlamydophila pneumoniae J138 PP-loop superfamily ATPase NP_301052.1 1143114 D 138677 CDS NP_301053.1 15836529 919767 1144261..1146993 1 NC_002491.1 ATP-dependent zinc protease 1146993 ftsH 919767 ftsH Chlamydophila pneumoniae J138 ATP-dependent zinc protease NP_301053.1 1144261 D 138677 CDS NP_301054.1 15836530 919768 complement(1147169..1149253) 1 NC_002491.1 polynucleotide phosphorylase 1149253 pnp 919768 pnp Chlamydophila pneumoniae J138 polynucleotide phosphorylase NP_301054.1 1147169 R 138677 CDS NP_301055.1 15836531 919769 complement(1149294..1149563) 1 NC_002491.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 1149563 rpsO 919769 rpsO Chlamydophila pneumoniae J138 30S ribosomal protein S15 NP_301055.1 1149294 R 138677 CDS NP_301056.1 15836532 919770 1149832..1150278 1 NC_002491.1 cytosine deaminase 1150278 yfhC 919770 yfhC Chlamydophila pneumoniae J138 cytosine deaminase NP_301056.1 1149832 D 138677 CDS NP_301057.1 15836533 919771 1150268..1150498 1 NC_002491.1 hypothetical protein 1150498 919771 CPj1002 Chlamydophila pneumoniae J138 hypothetical protein NP_301057.1 1150268 D 138677 CDS NP_301058.1 15836534 919772 complement(1150495..1151202) 1 NC_002491.1 hypothetical protein 1151202 919772 CPj1003 Chlamydophila pneumoniae J138 hypothetical protein NP_301058.1 1150495 R 138677 CDS NP_301059.1 15836535 919773 complement(1151282..1151803) 1 NC_002491.1 hypothetical protein 1151803 919773 CPj1004 Chlamydophila pneumoniae J138 hypothetical protein NP_301059.1 1151282 R 138677 CDS NP_301060.1 15836536 919774 complement(1151818..1152339) 1 NC_002491.1 hypothetical protein 1152339 919774 CPj1005 Chlamydophila pneumoniae J138 hypothetical protein NP_301060.1 1151818 R 138677 CDS NP_301061.1 15836537 919775 complement(1152393..1152878) 1 NC_002491.1 hypothetical protein 1152878 919775 CPj1006 Chlamydophila pneumoniae J138 hypothetical protein NP_301061.1 1152393 R 138677 CDS NP_301062.1 15836538 919753 1153095..1153316 1 NC_002491.1 hypothetical protein 1153316 919753 CPj1007 Chlamydophila pneumoniae J138 hypothetical protein NP_301062.1 1153095 D 138677 CDS NP_301063.1 15836539 919752 1153334..1154632 1 NC_002491.1 hypothetical protein 1154632 919752 CPj1008 Chlamydophila pneumoniae J138 hypothetical protein NP_301063.1 1153334 D 138677 CDS NP_301064.1 15836540 919776 complement(1154589..1155464) 1 NC_002491.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; methionine aminopeptidase 1155464 map 919776 map Chlamydophila pneumoniae J138 methionine aminopeptidase NP_301064.1 1154589 R 138677 CDS NP_301065.1 15836541 919780 complement(1155470..1156078) 1 NC_002491.1 hypothetical protein 1156078 919780 CPj1010 Chlamydophila pneumoniae J138 hypothetical protein NP_301065.1 1155470 R 138677 CDS NP_301066.1 15836542 919787 complement(1156305..1156712) 1 NC_002491.1 hypothetical protein 1156712 919787 CPj1011 Chlamydophila pneumoniae J138 hypothetical protein NP_301066.1 1156305 R 138677 CDS NP_301067.1 15836543 919790 complement(1156824..1158599) 1 NC_002491.1 ABC transporter permease 1158599 yzeB 919790 yzeB Chlamydophila pneumoniae J138 ABC transporter permease NP_301067.1 1156824 R 138677 CDS NP_301068.1 15836544 919783 1158651..1160033 1 NC_002491.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 1160033 fumC 919783 fumC Chlamydophila pneumoniae J138 fumarate hydratase NP_301068.1 1158651 D 138677 CDS NP_301069.1 15836545 919014 complement(1160135..1161832) 1 NC_002491.1 sulfate transporter 1161832 ychM 919014 ychM Chlamydophila pneumoniae J138 sulfate transporter NP_301069.1 1160135 R 138677 CDS NP_301070.1 15836546 919781 1162040..1163302 1 NC_002491.1 possible IM protein; hypothetical protein 1163302 919781 CPj1015 Chlamydophila pneumoniae J138 hypothetical protein NP_301070.1 1162040 D 138677 CDS NP_301071.1 15836547 919778 1163448..1165307 1 NC_002491.1 hypothetical protein 1165307 919778 CPj1016 Chlamydophila pneumoniae J138 hypothetical protein NP_301071.1 1163448 D 138677 CDS NP_301072.1 15836548 919793 1165412..1166344 1 NC_002491.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1166344 ispH 919793 ispH Chlamydophila pneumoniae J138 4-hydroxy-3-methylbut-2-enyl diphosphate reductase NP_301072.1 1165412 D 138677 CDS NP_301073.1 15836549 919782 1166304..1167038 1 NC_002491.1 hypothetical protein 1167038 919782 CPj1018 Chlamydophila pneumoniae J138 hypothetical protein NP_301073.1 1166304 D 138677 CDS NP_301074.1 15836550 918977 complement(1167041..1168534) 1 NC_002491.1 hypothetical protein 1168534 918977 CPj1019 Chlamydophila pneumoniae J138 hypothetical protein NP_301074.1 1167041 R 138677 CDS NP_301075.1 15836551 918997 complement(1168553..1170085) 1 NC_002491.1 hypothetical protein 1170085 918997 CPj1020 Chlamydophila pneumoniae J138 hypothetical protein NP_301075.1 1168553 R 138677 CDS NP_301076.1 15836552 919792 complement(1170101..1170619) 1 NC_002491.1 low calcium response protein H 1170619 lcrH_2 919792 lcrH_2 Chlamydophila pneumoniae J138 low calcium response protein H NP_301076.1 1170101 R 138677 CDS NP_301077.1 15836553 919795 complement(1170619..1172079) 1 NC_002491.1 hypothetical protein 1172079 919795 CPj1022 Chlamydophila pneumoniae J138 hypothetical protein NP_301077.1 1170619 R 138677 CDS NP_301078.1 15836554 919798 1172441..1172740 1 NC_002491.1 hypothetical protein 1172740 919798 CPj1023 Chlamydophila pneumoniae J138 hypothetical protein NP_301078.1 1172441 D 138677 CDS NP_301079.1 15836555 918963 complement(1172737..1173642) 1 NC_002491.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 1173642 xerD 918963 xerD Chlamydophila pneumoniae J138 site-specific tyrosine recombinase XerD NP_301079.1 1172737 R 138677 CDS NP_301080.1 15836556 918954 1173708..1175288 1 NC_002491.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 1175288 pgi 918954 pgi Chlamydophila pneumoniae J138 glucose-6-phosphate isomerase NP_301080.1 1173708 D 138677 CDS NP_301081.1 15836557 919797 1175403..1175546 1 NC_002491.1 LtuA protein 1175546 919797 CPj1026 Chlamydophila pneumoniae J138 LtuA protein NP_301081.1 1175403 D 138677 CDS NP_301082.1 15836558 919801 1175581..1177161 1 NC_002491.1 hypothetical protein 1177161 919801 CPj1027 Chlamydophila pneumoniae J138 hypothetical protein NP_301082.1 1175581 D 138677 CDS NP_301083.1 15836559 919802 1177419..1178405 1 NC_002491.1 catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase 1178405 mdhC 919802 mdhC Chlamydophila pneumoniae J138 malate dehydrogenase NP_301083.1 1177419 D 138677 CDS NP_301084.1 15836560 919803 1178411..1179250 1 NC_002491.1 hypothetical protein 1179250 919803 CPj1029 Chlamydophila pneumoniae J138 hypothetical protein NP_301084.1 1178411 D 138677 CDS NP_301085.1 15836561 919804 complement(1179243..1180289) 1 NC_002491.1 D-amino acid dehyrogenase 1180289 919804 CPj1030 Chlamydophila pneumoniae J138 D-amino acid dehyrogenase NP_301085.1 1179243 R 138677 CDS NP_301086.1 15836562 919805 complement(1180510..1181955) 1 NC_002491.1 arginine/ornithine antiporter 1181955 arcD 919805 arcD Chlamydophila pneumoniae J138 arginine/ornithine antiporter NP_301086.1 1180510 R 138677 CDS NP_301087.1 15836563 919806 complement(1181966..1182553) 1 NC_002491.1 hypothetical protein 1182553 919806 CPj1032 Chlamydophila pneumoniae J138 hypothetical protein NP_301087.1 1181966 R 138677 CDS NP_301088.1 15836564 919807 complement(1182587..1183903) 1 NC_002491.1 hypothetical protein 1183903 919807 CPj1033 Chlamydophila pneumoniae J138 hypothetical protein NP_301088.1 1182587 R 138677 CDS NP_301089.1 15836565 919808 complement(1184132..1184920) 1 NC_002491.1 hypothetical protein 1184920 919808 CPj1034 Chlamydophila pneumoniae J138 hypothetical protein NP_301089.1 1184132 R 138677 CDS NP_301090.1 15836566 919809 complement(1184970..1186403) 1 NC_002491.1 AroDE; bifunctional enzyme; can convert 3-dehydroquinate to 3-dehydroshkimate and then to shikimate; involved in the synthesis of aromatic amino acids and other metabolites; type I 3-DHQase; bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase 1186403 aroDE 919809 aroDE Chlamydophila pneumoniae J138 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase NP_301090.1 1184970 R 138677 CDS NP_301091.1 15836567 919811 complement(1186384..1187538) 1 NC_002491.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 1187538 aroB 919811 aroB Chlamydophila pneumoniae J138 3-dehydroquinate synthase NP_301091.1 1186384 R 138677 CDS NP_301092.1 15836568 919812 complement(1187523..1188602) 1 NC_002491.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1188602 aroC 919812 aroC Chlamydophila pneumoniae J138 chorismate synthase NP_301092.1 1187523 R 138677 CDS NP_301093.1 15836569 919810 complement(1188599..1189129) 1 NC_002491.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 1189129 aroL 919810 aroL Chlamydophila pneumoniae J138 shikimate kinase NP_301093.1 1188599 R 138677 CDS NP_301094.1 15836570 919800 complement(1189065..1190402) 1 NC_002491.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1190402 aroA 919800 aroA Chlamydophila pneumoniae J138 3-phosphoshikimate 1-carboxyvinyltransferase NP_301094.1 1189065 R 138677 CDS NP_301095.1 15836571 919799 complement(1190473..1191144) 1 NC_002491.1 hypothetical protein 1191144 919799 CPj1040 Chlamydophila pneumoniae J138 hypothetical protein NP_301095.1 1190473 R 138677 CDS NP_301096.1 15836572 919813 complement(1191126..1192397) 1 NC_002491.1 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1192397 bioA 919813 bioA Chlamydophila pneumoniae J138 adenosylmethionine-8-amino-7-oxononanoate aminotransferase NP_301096.1 1191126 R 138677 CDS NP_301097.1 15836573 919814 complement(1192334..1192993) 1 NC_002491.1 dethiobiotin synthetase 1192993 bioD 919814 bioD Chlamydophila pneumoniae J138 dethiobiotin synthetase NP_301097.1 1192334 R 138677 CDS NP_301098.1 15836574 919817 complement(1192972..1194120) 1 NC_002491.1 oxononanoate synthase 1194120 bioF_2 919817 bioF_2 Chlamydophila pneumoniae J138 oxononanoate synthase NP_301098.1 1192972 R 138677 CDS NP_301099.1 15836575 919818 complement(1194099..1195094) 1 NC_002491.1 biotin synthase 1195094 bioB 919818 bioB Chlamydophila pneumoniae J138 biotin synthase NP_301099.1 1194099 R 138677 CDS NP_301100.1 15836576 919819 complement(1195301..1195993) 1 NC_002491.1 hypothetical protein 1195993 919819 CPj1045 Chlamydophila pneumoniae J138 hypothetical protein NP_301100.1 1195301 R 138677 CDS NP_301101.1 15836577 919820 complement(1195990..1197078) 1 NC_002491.1 catalyzes the formation of tyrosine, dihydroxyphenylalanine, and 5-hydroxytryptophan from phenylalanine, tyrosine, and tryptophan respectively; aromatic amino acid hydroxylase 1197078 phhA 919820 phhA Chlamydophila pneumoniae J138 aromatic amino acid hydroxylase NP_301101.1 1195990 R 138677 CDS NP_301102.1 15836578 919816 1196955..1197749 1 NC_002491.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 1197749 dapB 919816 dapB Chlamydophila pneumoniae J138 dihydrodipicolinate reductase NP_301102.1 1196955 D 138677 CDS NP_301103.1 15836579 919864 1198009..1199010 1 NC_002491.1 catalyzes the formation of aspartate semialdehyde from aspartyl phosphate; aspartate-semialdehyde dehydrogenase 1199010 asd 919864 asd Chlamydophila pneumoniae J138 aspartate-semialdehyde dehydrogenase NP_301103.1 1198009 D 138677 CDS NP_301104.1 15836580 919815 1198998..1200320 1 NC_002491.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; aspartate kinase 1200320 lysC 919815 lysC Chlamydophila pneumoniae J138 aspartate kinase NP_301104.1 1198998 D 138677 CDS NP_301105.1 15836581 919821 1200329..1201204 1 NC_002491.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1201204 dapA 919821 dapA Chlamydophila pneumoniae J138 dihydrodipicolinate synthase NP_301105.1 1200329 D 138677 CDS NP_301106.1 15836582 919822 1201365..1201676 1 NC_002491.1 hypothetical protein 1201676 919822 CPj1051 Chlamydophila pneumoniae J138 hypothetical protein NP_301106.1 1201365 D 138677 CDS NP_301107.1 15836583 919824 1201820..1202575 1 NC_002491.1 hypothetical protein 1202575 919824 CPj1052 Chlamydophila pneumoniae J138 hypothetical protein NP_301107.1 1201820 D 138677 CDS NP_301108.1 15836584 919860 1202556..1203107 1 NC_002491.1 hypothetical protein 1203107 919860 CPj1053 Chlamydophila pneumoniae J138 hypothetical protein NP_301108.1 1202556 D 138677 CDS NP_301109.1 15836585 919858 1203437..1203730 1 NC_002491.1 hypothetical protein 1203730 919858 CPj1054 Chlamydophila pneumoniae J138 hypothetical protein NP_301109.1 1203437 D 138677 CDS NP_301110.1 15836586 919857 1206028..1206858 1 NC_002491.1 hypothetical protein 1206858 919857 CPj1055 Chlamydophila pneumoniae J138 hypothetical protein NP_301110.1 1206028 D 138677 CDS NP_301111.1 15836587 919854 1206861..1207565 1 NC_002491.1 hypothetical protein 1207565 919854 CPj1056 Chlamydophila pneumoniae J138 hypothetical protein NP_301111.1 1206861 D 138677 CDS NP_301112.1 15836588 919856 1207831..1209933 1 NC_002491.1 hypothetical protein 1209933 919856 CPj1057 Chlamydophila pneumoniae J138 hypothetical protein NP_301112.1 1207831 D 138677 CDS NP_301113.1 15836589 919825 1210082..1211173 1 NC_002491.1 hypothetical protein 1211173 919825 CPj1058 Chlamydophila pneumoniae J138 hypothetical protein NP_301113.1 1210082 D 138677 CDS NP_301114.1 15836590 919826 1211182..1212015 1 NC_002491.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1212015 ksgA 919826 ksgA Chlamydophila pneumoniae J138 dimethyladenosine transferase NP_301114.1 1211182 D 138677 CDS NP_301115.1 15836591 919827 complement(1212058..1213992) 1 NC_002491.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1213992 tktB_2 919827 tktB_2 Chlamydophila pneumoniae J138 1-deoxy-D-xylulose-5-phosphate synthase NP_301115.1 1212058 R 138677 CDS NP_301116.1 15836592 919828 complement(1213997..1214254) 1 NC_002491.1 hypothetical protein 1214254 919828 CPj1061 Chlamydophila pneumoniae J138 hypothetical protein NP_301116.1 1213997 R 138677 CDS NP_301117.1 15836593 919829 complement(1214490..1216154) 1 NC_002491.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1216154 xseA 919829 xseA Chlamydophila pneumoniae J138 exodeoxyribonuclease VII large subunit NP_301117.1 1214490 R 138677 CDS NP_301118.1 15836594 919830 1216285..1217049 1 NC_002491.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 1217049 tpiA 919830 tpiA Chlamydophila pneumoniae J138 triosephosphate isomerase NP_301118.1 1216285 D 138677 CDS NP_301119.1 15836595 919832 1217053..1217232 1 NC_002491.1 hypothetical protein 1217232 919832 CPj1064 Chlamydophila pneumoniae J138 hypothetical protein NP_301119.1 1217053 D 138677 CDS NP_301120.1 15836596 919834 complement(1217259..1217429) 1 NC_002491.1 hypothetical protein 1217429 919834 CPj1065 Chlamydophila pneumoniae J138 hypothetical protein NP_301120.1 1217259 R 138677 CDS NP_301121.1 15836597 919833 1217469..1217825 1 NC_002491.1 preprotein translocase subunit SecG 1217825 secG 919833 secG Chlamydophila pneumoniae J138 preprotein translocase subunit SecG NP_301121.1 1217469 D 138677 CDS NP_301122.1 15836598 919831 1218069..1218629 1 NC_002491.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1218629 def 919831 def Chlamydophila pneumoniae J138 peptide deformylase NP_301122.1 1218069 D 138677 CDS NP_301123.1 15836599 919823 complement(1218696..1219592) 1 NC_002491.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease HIII 1219592 rnhB_2 919823 rnhB_2 Chlamydophila pneumoniae J138 ribonuclease HIII NP_301123.1 1218696 R 138677 CDS NP_301124.1 15836600 919835 1219847..1220278 1 NC_002491.1 HTH transcriptional regulator 1220278 yfgA 919835 yfgA Chlamydophila pneumoniae J138 HTH transcriptional regulator NP_301124.1 1219847 D 138677 CDS NP_301125.1 15836601 919836 complement(1220475..1221845) 1 NC_002491.1 hypothetical protein 1221845 919836 CPj1070 Chlamydophila pneumoniae J138 hypothetical protein NP_301125.1 1220475 R 138677 CDS NP_301126.1 15836602 919837 complement(1222217..1223659) 1 NC_002491.1 hypothetical protein 1223659 919837 CPj1071 Chlamydophila pneumoniae J138 hypothetical protein NP_301126.1 1222217 R 138677 CDS NP_301127.1 15836603 919838 1224304..1225173 1 NC_002491.1 hypothetical protein 1225173 919838 CPj1072 Chlamydophila pneumoniae J138 hypothetical protein NP_301127.1 1224304 D 138677 CDS NP_301128.1 15836604 919839 1225346..1226170 1 NC_002491.1 outer membrane protein 1226170 919839 CPj1073 Chlamydophila pneumoniae J138 outer membrane protein NP_301128.1 1225346 D 138677 CDS