-- dump date 20140619_040538 -- class Genbank::CDS -- table cds_note -- id note NP_876277.1 similar to hypothetical protein CT001 - Chlamydia trachomatis NP_876279.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain NP_876280.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA NP_876281.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA NP_876282.1 outer membrane protein 6 NP_876284.1 similar to HB1 protein, Chlamydia pneumoniae strain VR1310 NP_876285.1 similar to HB2 protein, Chlamydia pneumoniae strain VR1310 NP_876286.1 similar to HB3 protein, Chlamydia pneumoniae strain VR1310 NP_876287.1 similar to HB2 protein, Chlamydia pneumoniae strain, strain VR1310 NP_876288.1 similar to HB2 and HB5 protein, Chlamydia pneumoniae, strain VR1310 NP_876289.1 similar to HB6 protein, Chlamydia pneumoniae, strain VR1310 NP_876290.1 similar to HB7 protein, Chlamydia pneumoniae, strain VR1310 NP_876291.1 similar to outer membrane protein 7 - Chlamydia pneumoniae, strain VR1310 NP_876292.1 similar to outer membrane protein 5 - Chlamydia pneumoniae, strain VR1310 NP_876293.1 similar to to outer membrane protein 5 - Chlamydia pneumoniae, strain VR1310 NP_876294.1 similar to outer membrane protein 5 - Chlamydia pneumoniae train VR1310 NP_876295.1 similar to outer membrane protein 5 - Chlamydia pneumoniae strain VR1310 NP_876296.1 similar to outer membrane protein 5 - Chlamydia pneumoniae, strain VR1310 NP_876298.1 similar to outer membrane protein 11 - Chlamydia pneumoniae strain VR1310 NP_876299.1 similar to outer membrane protein 5 - Chlamydia pneumoniae strain VR1310 NP_876300.1 similar to probable outer membrane protein CT351 - Chlamydia trachomatis NP_876301.1 similar to probable outer membrane protein CT350 - Chlamydia trachomatis NP_876302.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell NP_876303.1 similar to probable ABC transporter protein ATPase - Chlamydia trachomatis NP_876304.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs NP_876305.1 member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions NP_876307.1 similar to lon ATP-dependent proteinase family NP_876310.1 similar to probable o-sialoglycoprotein endopeptidase - Chlamydia trachomatis NP_876311.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA NP_876312.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion NP_876313.1 similar to 2-oxoisovalerate dehydrogenase alpha and beta subunit family fusion protein NP_876315.1 similar to competence locus E homolog - Synechocystis sp. NP_876316.1 similar to hypothetical protein CT338 - Chlamydia trachomatis NP_876317.1 similar to phosphotransferase system phosphohistidine-containing protein - Bacillus subtilis NP_876318.1 similar to phosphoenolpyruvate-protein phosphotransferase - Bacillus stearothermophilus NP_876319.1 similar to hypothetical protein CT335 - Chlamydia trachomatis NP_876320.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA NP_876321.1 similar to HB2 protein, Chlamydia pneumoniae, strain VR1310 NP_876322.1 similiarity to HB5 protein, Chlamydia pneumoniae, strain VR1310 NP_876323.1 similar to HB3/HB4 protein, Chlamydia pneumoniae; fusion protein NP_876325.1 similar to hypothetical protein yqfF - Bacillus subtilis NP_876329.1 transformation of prophobilinogen to hydroxymethylbilane in porphyrin biosynthesis NP_876330.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents NP_876331.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity NP_876332.1 similar to hypothetical protein CT296 - Chlamydia trachomatis NP_876333.1 similar to phosphomannomutase family NP_876334.1 similar to manganese superoxide dismutase precursor - Caenorhabditis elegans NP_876335.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits NP_876336.1 catalyzes the formation of dUMP from dUTP NP_876337.1 similar to PTS fructose-specific enzyme IIBC component fruA - Bacillus subtilis NP_876338.1 similar to phosphotransferase system enzyme II ptsN - Escherichia coli NP_876339.1 similar to sperm tail-specific protein mst101(2) - Drosophila hydei NP_876342.1 similar to hypothetical protein CT288 - Chlamydia trachomatis NP_876343.1 similar to hypothetical protein CT326 - Chlamydia trachomatis NP_876345.1 similar to F25H5.5 - Caenorhabditis elegans NP_876346.1 similar to hypothetical protein CT326 - Chlamydia trachomatis NP_876347.1 similar to hypothetical protein CT325 - Chlamydia trachomatis NP_876348.1 similar to hypothetical protein CT324 - Chlamydia trachomatis NP_876349.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 NP_876350.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu NP_876351.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force NP_876352.1 Modulates Rho-dependent transcription termination NP_876353.1 binds directly to 23S ribosomal RNA NP_876354.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA NP_876355.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit NP_876356.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors NP_876357.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme NP_876358.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter NP_876359.1 Maintains the balance of metabolites in the pentose-phosphate pathway NP_876360.1 similar to probable predied ferredoxin - Chlamydia trachomatis NP_876361.1 similar to hypothetical protein CT311 - Chlamydia trachomatis NP_876362.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the E subunit is part of the catalytic core of the ATP synthase complex NP_876363.1 similar to hypothetical protein CT309 - Chlamydia trachomatis NP_876364.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex NP_876365.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the B subunit is part of the catalytic core of the ATP synthase complex NP_876366.2 produces ATP from ADP in the presence of a proton gradient across the membrane; the D subunit is part of the catalytic core of the ATP synthase complex NP_876367.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I is part of the membrane proton channel. NP_876368.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits NP_876369.1 similar to hypothetical protein CT303 - Chlamydia trachomatis NP_876370.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain NP_876371.1 PknD; responsible for phosphorylation of proteins on serine and threonine residues; similar to eukaryotic Ser/Thr kinases; in Chlamydia trachomatis itseems to interact with Pkn1, another serine/threonine-protein kinase NP_876372.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate NP_876373.1 catalyzes the formation of phosphoenolpyruvate from pyruvate NP_876374.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA NP_876376.1 similar to hypothetical protein CT011 - Chlamydia trachomatis NP_876377.1 similar to hypothetical protein ybbP - Chlamydia trachomatis NP_876378.1 similar to cytochrome oxidase chain I family NP_876379.1 similar to cytochrome oxidase chain II family NP_876380.1 similar to hypothetical protein CT017 - Chlamydia trachomatis NP_876381.1 similar to hypothetical protein CT016 - Chlamydia trachomatis NP_876382.2 similar to phosphate starvation-inducible protein psiH - Escherichia coli NP_876383.1 similar to hypothetical protein CT058 - Chlamydia trachomatis NP_876384.1 similar to hypothetical protein CT018 - Chlamydia trachomatis NP_876386.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin) NP_876387.1 similar to signal peptidase I - Salmonella typhimurium NP_876388.1 similar to hypothetical protein CT021 - Chlamydia trachomatis NP_876389.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome NP_876390.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 NP_876391.1 HemK; PrmC; transfers a methyl group from S-adenosyl-methionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB possibly stimulating release of completed polypeptide chains NP_876392.1 similar to signal recognition particle chain ffh family NP_876393.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity NP_876394.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; Chlamydial proteins show a C-terminal extension of unknown function NP_876395.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site NP_876396.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids NP_876397.2 Essential for recycling GMP and indirectly, cGMP NP_876398.1 similar to hypothetical protein CT031 - Chlamydia trachomatis NP_876399.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content NP_876400.1 similar to exodeoxyribonuclease V 67K chain - Escherichia coli NP_876401.1 similar to HB1 protein, Chlamydia pneumoniae, strain VR1310 NP_876402.1 similar to HB7 protein, Chlamydia pneumoniae, strain VR1310 NP_876404.1 similar to HB7 protein, Chlamydia pneumoniae, strain VR1310 NP_876405.1 similar to probable cationic amino acid transporter - Chlamydia trachomatis NP_876406.1 similar to biotin--[acetyl-CoA-carboxylase] ligase - Saccharomyces cerevisiae NP_876407.1 similar to hypothetical protein CT036 - Chlamydia trachomatis NP_876410.1 similar to hypothetical protein CT109 - Chlamydia trachomatis NP_876411.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth NP_876412.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring NP_876413.1 similar to oligoendopeptidase F - Lactococcus lactis NP_876414.1 similar to ybgI protein - Escherichia coli NP_876415.1 catalyzes the formation of 5-aminolevulinate from (S)-4-amino-5-oxopentanoate NP_876416.1 similar to hypothetical protein CT211 - Chlamydia trachomatis NP_876417.1 similar to hypothetical protein CT212 - Chlamydia trachomatis NP_876418.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway NP_876420.1 similar to hypothetical protein of GGAI-protein family cluster A - Chlamydia pneumoniae NP_876421.1 heat shock protein; similar to heat shock protein ClpB - Synechococcus sp. NP_876422.1 similar to hypothetical protein CT114 - Chlamydia trachomatis NP_876425.1 similar to protein kinase family NP_876426.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB NP_876427.1 similar to hypothetical protein CT147 - Chlamydia trachomatis NP_876428.1 similar to pentachlorophenol 4-monooxygenase - Flavobacterium sp. NP_876429.1 similar to hypothetical protein CT149 - Chlamydia trachomatis NP_876430.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase NP_876431.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A NP_876433.1 similar to kdtA KDO-transferase - C. pneumoniae NP_876435.1 similar to KDO-transferase - C.pneumoniae NP_876437.1 catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate NP_876438.1 similar to cinnamoyl ester hydrolase - Butyrivibrio fibrisolvens NP_876440.1 similar to lamin 2 - Homo sapiens NP_876444.1 similar to ribosomal protein YmL31 precursor, mitochondrial - Saccharomyces cerevisiae NP_876449.1 glutamine-hydrolyzing; similar to GMP synthase (glutamine-hydrolyzing) - Escherichia coli NP_876450.1 similar to guaB gene for inosine 5-monophosphase dehydrogenase subunit - Escherichia coli ( pseudogene)' NP_876451.1 similar to guaB gene for inosine 5-monophosphase dehydrogenase subunit - Bacillus subtilis ( pseudogene)' NP_876455.1 similar to hypothetical protein CT153 - Chlamydia trachomatis NP_876461.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism NP_876462.1 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism NP_876463.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA NP_876464.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate NP_876465.1 similar to inclusion membrane protein A - Chlamydia psittaci NP_876466.1 similar to hypothetical protein 2 - Chlamydia psittaci NP_876467.1 similar to hypothetical protein CT132 - Chlamydia trachomatis NP_876468.1 similar to probable transmembrane protein CT131 - Chlamydia trachomatis NP_876469.1 similar to myosin heavy chain, skeletal muscle - Oryctolagus cuniculus NP_876470.1 similar to amino acid transport ATP-binding proteins NP_876471.1 similar to ABC amino acid transporter permease family NP_876472.1 similar to arginine repressor protein - Escherichia coli NP_876473.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity NP_876474.1 similar to oligopeptide ABC transport system substrate-binding protein oppA precursor - Bacillus subtilis NP_876475.1 similar to oligopeptide ABC transport system substrate-binding protein oppA precursor - Bacillus subtilis NP_876476.1 similar to oligopeptide ABC transport system substrate-binding protein oppA precursor - Bacillus subtilis NP_876477.1 similar to Bacillus subtilis dipeptide ABC transporter, dipeptide-binding protein NP_876478.1 similar to oligopeptide transport system permease protein oppB - Bacillus subtilis NP_876479.1 similar to oligopeptide ABC transporter (permease) oppC - Bacillus subtilis NP_876480.1 similar to oligopeptide transport ATP-binding protein oppD - Bacillus subtilis NP_876481.1 similar to oligopeptide transport protein oppF - Lactococcus lactis NP_876486.1 similar to hypothetical protein CT203 - Chlamydia trachomatis NP_876487.1 similar to 2-oxoglutarate/malate translocator precursor - Spinacia oleracea NP_876488.1 catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate NP_876494.1 similar to transport protein USO1 - Saccharomyces cerevisiae NP_876495.1 similar to mammalian coiled coil synaptonemal complex protein family NP_876499.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4, 5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7- deazaguanosine) NP_876503.1 similar to 47.6K protein - Chlamydia psittaci phage Chp1 NP_876505.1 similar to major adhesion protein MgPa gene - Mycoplasma genitalium NP_876509.1 similar to probable protein-disulfide oxidoreductase - Chlamydia trachomatis NP_876510.1 similar to probable disulfide bond chaperone - Chlamydia trachomatis NP_876511.1 similar to hypothetical protein CT178 - Chlamydia trachomatis NP_876512.1 similar to hypothetical protein CT179 - Chlamydia trachomatis NP_876513.1 similar to ATP-binding cassette-transport protein - Mycobacterium smegmatis NP_876514.1 similar to pfs protein - Haemophilus influenzae NP_876516.1 similar to hypothetical protein CT181 - Chlamydia trachomatis NP_876517.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS NP_876518.1 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer NP_876519.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function NP_876520.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate NP_876521.1 catalyzes the formation of 6-phospho-D-gluconate from 6-phospho-D-glucono-1,5-lactone NP_876527.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP NP_876528.1 similar to Listeria seeligeri p60 precursor; invasion-associated protein NP_876529.1 forms a direct contact with the tRNA during translation NP_876530.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit NP_876531.1 similar to ABC transporter ATPase family NP_876532.1 similar to hypothetical protein CT151 - Chlamydia trachomatis NP_876533.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif NP_876534.1 similar to hypothetical protein aq_849 - Aquifex aeolicus NP_876535.1 similar to hypothetical protein CT144 - Chlamydia trachomatis NP_876536.1 similar to hypothetical protein CT144 - Chlamydia trachomatis NP_876537.1 similar to hypothetical protein CT143 - Chlamydia trachomatis NP_876538.1 similar to hypothetical protein CT142 - Chlamydia trachomatis NP_876539.1 similar to hypothetical protein CT144 - Chlamydia trachomatis NP_876540.1 similar to hypothetical protein CT143 - Chlamydia trachomatis NP_876541.1 similar to hypothetical protein CT142 - Chlamydia trachomatis NP_876542.1 similar to pEARLI 4 - Arabidopsis thaliana NP_876543.1 similar to YecA - Escherichia coli NP_876544.1 similar to ydaO protein - Escherichia coli NP_876545.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate NP_876546.1 similar to hypothetical protein yqfU - Chlamydia trachomatis NP_876547.1 similar to phenylacrylic acid decarboxylase - Saccharomyces cerevisiae NP_876548.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin NP_876549.1 similar to HB6 protein, Chlamydia pneumoniae NP_876552.1 similar to membrane dipeptidase precursor - rat NP_876553.1 similar to SUA5 protein - Saccharomyces cerevisiae NP_876554.1 similar to esterase - Spirulina platensis NP_876555.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA NP_876556.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP) NP_876557.1 negatively supercoils closed circular double-stranded DNA NP_876558.1 negatively supercoils closed circular double-stranded DNA NP_876559.1 similar to hypothetical protein CT191 - Chlamydia trachomatis NP_876562.1 similar to gene encoding a 29 kDa immunogenic protein - Legionella pneumophila NP_876563.1 similar to ABC transporter family NP_876564.1 similar to amino-acid ABC transporter protein family NP_876565.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate NP_876566.1 similar to extreme acid resistance protein xasA - Escherichia coli NP_876570.1 similar to mgtE protein - Bacillus firmus NP_876571.1 similar to hypothetical protein CT195 - Chlamydia trachomatis NP_876572.1 similar to hypothetical protein CT195 - Chlamydia trachomati NP_876573.1 similar to amino acid (glutamate) transporter family NP_876574.1 AaaT; similar to sodium-dependent amino acid transporter (AaaT) - Chlamydia psittaci NP_876576.1 similar to inclusion membrane protein B - Chlamydia psittaci NP_876577.1 similar to inclusion membrane protein C - Chlamydia psittaci NP_876578.1 similar to amino acid transporter - Chlamydia psittaci NP_876579.1 similar to cAMP-dependent protein kinase type I regulatory subunit - Rattus norvegicus NP_876580.1 carries the fatty acid chain in fatty acid biosynthesis NP_876581.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis NP_876582.1 similar to malonyl CoA-acyl carrier protein transacylase fabD - Bacillus subtilis NP_876583.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs NP_876584.1 involved in a recombinational process of DNA repair, independent of the recBC complex NP_876585.1 similar to probable omp85 analog - Chlamydia trachomatis NP_876586.1 similar to ompH-like outer membrane protein - Chlamydia trachomatis NP_876587.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis NP_876588.1 similar to hypothetical protein CT244 - Chlamydia trachomatis NP_876589.1 similar to pyruvate dehydrogenase complex E1 alpha subunit - Thiobacillus ferrooxidans NP_876590.1 similar to pyruvate dehydrogenase E1 beta subunit - Zea mays NP_876591.1 Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA NP_876592.1 similar to glycogen phosphorylase family NP_876593.1 similar to hypothetical protein orf175 - Pseudomonas stutzeri NP_876594.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. NP_876595.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria NP_876596.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein NP_876597.1 similar to hypothetical protein CT101 - Chlamydia trachomatis NP_876598.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids NP_876599.1 similar to thioredoxin reductase - Neurospora crassa NP_876601.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins NP_876602.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination NP_876603.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex NP_876604.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock NP_876605.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs NP_876606.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities NP_876607.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 NP_876608.1 type III secretion protein; similar to YopU type III secretion protein - Chlamydia psittaci NP_876609.1 similar to low calcium response D lcrD protein - Yersinia enterocolitica NP_876610.1 similar to CopN - Chlamydia psittaci NP_876611.1 chaperone of type III secretory pathway; similar to chaperone of type III secretory pathway scc1 - Chlamydia psittaci NP_876612.1 amylomaltase; acts to release glucose from maltodextrins NP_876613.1 required for 70S ribosome assembly NP_876614.1 similar to hypothetical protein CT085 - Chlamydia trachomatis NP_876615.1 leader (33) peptide; similar to probable phopholipase D, leader (33) peptide - Chlamydia trachomatis NP_876616.1 similar to hypothetical protein CT083 - Chlamydia trachomatis NP_876617.1 similar to hypothetical protein CT082 - Chlamydia trachomatis NP_876618.1 similar to LtuB - Chlamydia trachomatis NP_876619.1 similar to hypothetical protein CT079 - Chlamydia trachomatis NP_876620.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate NP_876621.1 similar to thiamine biosynthesis lipoprotein precursor - Salmonella typhimurium NP_876622.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation NP_876623.1 binds the polymerase to DNA and acts as a sliding clamp NP_876624.1 similar to hypothetical protein CT073 - Chlamydia trachomatis NP_876625.1 similar to probable metalloproteinase - Chlamydia trachomatis NP_876626.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate NP_876627.1 similar to probable integral membrane protein - Chlamydia trachomatis NP_876628.1 similar to probable integral membrane protein - Chlamydia trachomatis NP_876629.1 similar to ABC transporter family NP_876630.1 similar to periplasmic substrate binding protein TroA - Chlamydia trachomatis NP_876632.1 similar to hypothetical protein CT066 - Chlamydia trachomatis NP_876633.1 similar to ATP/ADP-transporter - Solanum tuberosum NP_876642.1 binds to the ribosome on the universally-conserved alpha-sarcin loop NP_876643.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate NP_876644.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) NP_876646.1 expressed in response to temperature increase; may be involved in expression of genes involved in the developmental cycle of Chlamydia NP_876647.1 similar to flagellar secretion protein - Helicobacter pylori NP_876648.1 similar to ferredoxin IV - Rhodobacter capsulatus NP_876653.1 similar to hypothetical protein CT058 - Chlamydia trachomatis NP_876655.1 similar to hypothetical protein CT058 - Chlamydia trachomatis NP_876656.1 similar to hypothetical protein CT058 - Chlamydia trachomatis NP_876659.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-clclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; these proteins appear to consist of duplicate domains as compared to Escherichia coli IspG NP_876660.1 similar to hypothetical protein CT056 - Chlamydia trachomatis NP_876663.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA NP_876664.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide NP_876665.1 similar to hypothetical protein CT053 - Chlamydia trachomatis NP_876666.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III NP_876667.1 similar to hypothetical protein CT326 - Chlamydia trachomatis NP_876668.1 similar to hypothetical protein yraL - Chlamydia trachomatis NP_876669.1 similar to hypothetical protein CT047 - Chlamydia trachomatis NP_876670.1 similar to probable histone-like protein 2 - Chlamydia trachomatis NP_876671.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides NP_876672.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA NP_876673.1 similar to hypothetical protein CT043 - Chlamydia trachomatis NP_876674.1 similar to glycogen hydrolase (debranching) - Oryza sativa NP_876675.1 similar to hypothetical protein CT041 - Chlamydia trachomatis NP_876676.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration NP_876678.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis NP_876679.1 similar to hypothetical protein CT038 - Chlamydia trachomatis NP_876680.1 similar to probable hemolysin family NP_876681.1 similar to probable hemolysin family NP_876682.1 similar to nitrogen fixation nifS protein family NP_876683.1 similar to hypothetical protein yloO - Bacillus subtilis NP_876686.1 similar to hypothetical protein CT253 - Chlamydia trachomatis NP_876687.1 similar to hypothetical protein CT254 - Chlamydia trachomatis NP_876688.1 similar to beta-lactamase regulatory protein homolog - Haemophilus influenzae NP_876689.1 similar to A/G-specific adenine glycosylase - Escherichia coli NP_876690.1 similar to pseudouridine synthetase sfhB - Escherichia coli NP_876691.1 similar to hypothetical protein CT105 - Chlamydia trachomatis NP_876694.1 Catalyzes a key regulatory step in fatty acid biosynthesis NP_876695.1 similar to probable had hydrolase/phosphatase - Chlamydia trachomatis NP_876698.1 similar to hypothetical protein CT102 - Chlamydia trachomatis NP_876699.1 similar to hypothetical protein CT260 - Chlamydia trachomatis NP_876700.1 3'-5' exonuclease of DNA polymerase III NP_876701.1 similar to hypothetical protein CT262 - Chlamydia trachomatis NP_876702.1 similar to hypothetical protein CT263 - Chlamydia trachomatis NP_876703.1 similar to Anabaena sp. ABC transporter; ATP-binding protein NP_876704.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein NP_876705.1 similar to hypothetical protein CT266 - Chlamydia trachomatis NP_876706.1 similar to integration host factor beta chain - Pseudomonas aeruginosa NP_876707.1 LytC; similar to N-acetylmuramoyl-L-alanine amidase 50K (lytC) precursor - Bacillus subtilis NP_876708.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate NP_876709.1 similar to Neisseria meningitidis penicillin-binding protein 2; transglycolase; transpeptidase NP_876710.1 similar to hypothetical protein CT271 - Chlamydia trachomatis NP_876711.1 similar to predicted S-adenosylmethionine-dependent methyltransferase - Chlamydia trachomatis NP_876712.1 similar to hypothetical protein CT273 - Chlamydia trachomatis NP_876713.1 similar to hypothetical protein CT274 - Chlamydia trachomatis NP_876714.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. NP_876715.1 similar to hypothetical protein CT276 - Chlamydia trachomatis NP_876716.1 similar to hypothetical protein CT277 - Chlamydia trachomatis NP_876717.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm NP_876718.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm NP_876719.1 Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm NP_876720.1 similar to Na+-translocating NADH-quinone reductase nqr5 - Vibrio alginolyticus NP_876723.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor NP_876724.1 similar to hypothetical protein CT283 - Chlamydia trachomatis NP_876725.1 similar to probable phospholipase D - Chlamydia trachomatis NP_876726.1 similar to probable lipoate protein ligase - Chlamydia trachomatis NP_876727.1 similar to class III stress response-related ATPase clpC - Bacillus subtilis NP_876728.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs NP_876731.1 similar to hypothetical protein CT007 - Chlamydia trachomatis NP_876732.1 similar to hypothetical protein CT006 - Chlamydia trachomatis NP_876733.1 similar to hypothetical protein CT005 - Chlamydia trachomatis NP_876734.1 similar to outer membrane protein omp11 - Chlamydia pneumoniae NP_876736.1 similar to outer membrane protein omp5 - Chlamydia pneumoniae NP_876739.1 similar to hypothetical protein yxjG - Bacillus subtilis NP_876745.1 similar to outer membrane protein 11 - Chlamydia pneumoniae, strain VR1310 NP_876758.1 similar to outer membrane protein 11 - Chlamydia pneumoniae, strain VR1310 NP_876759.1 similar to outer membrane protein 5 - Chlamydia pneumoniae, strain VR1310 NP_876760.1 similar to outer membrane protein 10 - Chlamydia pneumoniae, strain VR1310 NP_876761.1 similar to outer membrane protein 11 - Chlamydia pneumoniae, strain VR1310 NP_876762.1 similar to outer membrane protein, Chlamydia pneumoniae, strain VR1310 NP_876763.1 similar to outer membrane protein 11 - Chlamydia pneumoniae NP_876767.1 similar to hypothetical protein CT365 - Chlamydia trachomatis NP_876768.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain NP_876769.1 similar to hypothetical protein CT865 - Chlamydia trachomatis NP_876770.1 similar to hypothetical protein yqeV - Bacillus subtilis NP_876771.1 similar to GTP binding protein hflX family NP_876772.1 similar to probable metal dependent hydrolase - Chlamydia trachomatis NP_876773.1 similar to hypothetical protein CT383 - Chlamydia trachomatis NP_876774.1 similar to arginine-binding periplasmic protein 2 precursor - Escherichia coli NP_876776.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate NP_876778.1 similar to prolin permease protein family NP_876779.1 similar to hypothetical protein CT384 - Chlamydia trachomatis NP_876780.1 similar to histidine triad homology family NP_876781.1 similar to probable metal dependent hydrolase - Chlamydia trachomatis NP_876782.1 similar to hypothetical protein CT387 - Chlamydia trachomatis NP_876783.1 similar to hypothetical protein CT389 - Chlamydia trachomati NP_876787.1 catalyzes the interconversion of tetrahydrodipicolinate and L,L-diaminopimelate in lysine biosynthesis NP_876788.1 similar to hypothetical protein CT391 - Chlamydia trachomatis NP_876789.1 similar to hypothetical protein CT388 - Chlamydia trachomatis NP_876791.1 similar to hypothetical protein yprS - Chlamydia trachomatis NP_876792.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) NP_876793.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons NP_876794.1 heat shock protein; similar to heat shock protein grpE - Bacillus subtilis NP_876795.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria NP_876797.1 similar to proteins of ribonuclease family NP_876798.1 similar to N-methylpurine-DNA glycosylase - Mus musculus NP_876799.1 similar to hypothetical protein CT421 - Chlamydia trachomatis NP_876800.1 similar to hypothetical protein CT421.1 - Chlamydia trachomatis NP_876801.1 similar to hypothetical protein CT421.2 - Chlamydia trachomatis NP_876802.1 similar to hypothetical protein CT422 - Chlamydia trachomatis NP_876803.1 similar to hemolysin C - Treponema hyodysenteriae NP_876804.1 similar to sigma F regulatory factor - Bacillus subtilis NP_876805.1 similar to hypothetical protein CT425 - Chlamydia trachomatis NP_876806.1 similar to hypothetical protein CT426 - Chlamydia trachomatis NP_876808.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone NP_876811.1 similar to hypothetical protein CT429 - Chlamydia trachomatis NP_876812.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate NP_876813.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates NP_876814.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate NP_876815.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis NP_876818.1 similar to hypothetical protein CT398 - Chlamydia trachomatis NP_876819.1 similar to kpsF protein - Escherichia coli NP_876820.1 Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA NP_876821.1 similar to proton/sodium glutamate symport transporter family NP_876822.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate NP_876823.1 similar to tRNA methylase spoU - Escherichia coli NP_876824.1 similar to probable SAM dependent methyltransferase - Chlamydia trachomatis NP_876825.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine NP_876826.1 similar to hypothetical protein CT406 - Chlamydia trachomatis NP_876827.1 similar to general stress protein 160 - Bacillus subtilis NP_876828.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis NP_876829.1 similar to alanine/glycine transporter protein family NP_876830.1 similar to hypothetical protein CT814.1 - Chlamydia trachomatis NP_876831.1 similar to hypothetical protein CT814 - Chlamydia trachomatis NP_876832.1 similar to outer membrane protein omp11 - Chlamydia pneumoniae, strain VR1310 NP_876833.1 similar to outer membrane protein omp5 - Chlamydia pneumoniae NP_876834.1 similar to adhesin B protein family NP_876835.1 similar to ABC transporter ATPase family NP_876836.1 similar to iron transport protein - Yersinia pestis NP_876837.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication NP_876838.1 involved in the peptidyltransferase reaction during translation NP_876839.1 similar to ribosomal protein L21 family NP_876840.2 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate NP_876841.1 similar to sulfite reductase [NADPH] flavoprotein alpha-component - Escherichia coli NP_876842.2 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex NP_876843.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene NP_876844.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit NP_876845.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance NP_876848.1 similar to hypothetical protein CT440 - Chlamydia trachomatis NP_876849.1 similar to carboxy-terminal proteinase precursor - Escherichia coli NP_876850.1 similar to sulfur-rich protein - Chlamydia psittaci NP_876853.1 similar to hypothetical protein CT444.1 - Chlamydia trachomatis NP_876854.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation NP_876855.1 similar to early upstream orf EUO - Chlamydia psittaci NP_876856.1 similar to hypothetical 43.0K protein - Chlamydia psittaci NP_876857.1 similar to ssDNA-specific exonuclease recJ - Escherichia coli NP_876858.1 part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; in these organisms there is an unknown N-terminal domain NP_876859.1 similar to sensory transduction regulatory protein - Methanobacterium thermoautotrophicum NP_876860.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate NP_876861.1 similar to phosphatidate cytidylyltransferase - Escherichia coli NP_876862.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP NP_876863.1 similar to glycerol-3-phosphate acyltransferase - Homo sapiens NP_876864.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase NP_876865.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active NP_876866.1 similar to hypothetical protein CT456 - Chlamydia trachomatis NP_876867.1 similar to hypothetical protein CT457 - Chlamydia trachomatis NP_876869.1 similar to spermine/spermidine acetyltransferase bltD - Bacillus subtilis NP_876870.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1 NP_876871.1 similar to hypothetical protein - Synechocystis sp. NP_876872.1 similar to histone H3 family NP_876873.1 similar to hypothetical protein CT460 - Chlamydia trachomatis NP_876874.1 similar to probable phosphoesterase yaeI - Escherichia coli NP_876875.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers NP_876876.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability NP_876877.1 similar to probable phosphoglycolate phosphatase - Chlamydia trachomatis NP_876878.1 similar to hypothetical protein CT465 - Chlamydia trachomatis NP_876879.1 similar to hypothetical protein CT466 - Chlamydia trachomatis NP_876880.1 sensor protein; similar to sensor protein AtoS - Escherichia coli NP_876882.1 similar to acetate metabolism regulatory protein atoC - Escherichia coli NP_876883.1 similar to ribosomal protein S30AE family homolog yvyD - Bacillus subtilis NP_876884.1 similar to hypothetical protein CT469 - Chlamydia trachomatis NP_876885.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA NP_876886.1 similar to hypothetical protein CT471 - Chlamydia trachomatis NP_876887.1 similar to hypothetical protein CT472 - Chlamydia trachomatis NP_876888.1 similar to alpha-hemolysin hlyA - Aeromonas hydrophila NP_876889.1 similar to hypothetical protein CT474 - Chlamydia trachomatis NP_876890.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily NP_876891.1 similar to methylated-DNA-protein-cysteine S-methyltransferase - Methanococcus jannaschii NP_876892.1 similar to methylated-DNA-protein-cysteine S-methyltransferase family NP_876893.1 similar to oligopeptide ABC transporter permease protein family NP_876894.1 similar to dipeptide transport system permease protein dppB - Bacillus subtilis NP_876895.1 similar to Bacillus subtilis oligopeptide ABC transporter; oligopeptide-binding protein NP_876898.1 similar to hypothetical protein CT484 - Chlamydia trachomatis NP_876899.2 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic NP_876900.1 similar to glutamine-binding periplasmic protein precursor - Escherichia coli NP_876901.1 similar to probable methylase - Chlamydia trachomatis NP_876902.1 similar to probable phosphoesterase CT488 - Chlamydia trachomatis NP_876903.1 similar to glucose-1-phosphate adenylyltransferase - Anabaena sp. NP_876904.1 catalyzes the formation of orotidine monophosphate from 5-phosphoribosyl-1-pyrophosphate and orotate NP_876905.1 similar to hypothetical protein CT490 - Chlamydia trachomatis NP_876906.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes NP_876907.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis NP_876908.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair NP_876909.1 similar to proteinase IV family NP_876910.1 similar to plastidic ATP/ADP-transporter - Solanum tuberosum NP_876911.1 similar to CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (phosphatidylglycerophosphate synthase) (PGP synthase) - Pseudomonas fluorescens NP_876913.1 unwinds double stranded DNA NP_876915.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs NP_876916.1 similar to lipoate--protein ligase A - Escherichia coli NP_876917.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate NP_876918.1 plays an essential role in ATP-dependent branch migration of the Holliday junction NP_876919.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity NP_876920.1 similar to hypothetical protein CT503 - Chlamydia trachomatis NP_876921.1 similar to hypothetical protein CT504 - Chlamydia trachomatis NP_876922.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate NP_876923.1 is a component of the macrolide binding site in the peptidyl transferase center NP_876924.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme NP_876925.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 NP_876926.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA NP_876927.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase NP_876928.1 late assembly protein NP_876929.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance NP_876930.1 binds 5S rRNA along with protein L5 and L25 NP_876931.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance NP_876932.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit NP_876933.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 NP_876934.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel NP_876935.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase NP_876936.1 primary binding protein; helps mediate assembly; involved in translation fidelity NP_876937.1 one of the stabilizing components for the large ribosomal subunit NP_876938.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e NP_876939.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation NP_876940.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center NP_876941.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA NP_876942.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation NP_876943.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel NP_876944.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA NP_876945.2 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin NP_876946.1 similar to hypothetical protein - Chlamydia trachomatis NP_876947.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth NP_876948.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis NP_876949.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP NP_876950.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis NP_876951.1 Transfers the fatty acyl group on membrane lipoproteins NP_876952.1 similar to palmitoyl-CoA hydrolase and cytosolic acyl coenzyme A thioester hydrolase - Rattus norvegicus NP_876953.1 3'-5' exonuclease of DNA polymerase III NP_876955.1 ATPase or kinase; similar to probable (ATPase or kinase) - Chlamydia trachomatis NP_876956.1 similar to hypothetical protein CT538 - Chlamydia trachomatis NP_876957.1 similar to thioredoxin family NP_876958.1 similar to probable rRNA methylase family NP_876959.1 similar to mip protein family NP_876960.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes NP_876961.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG NP_876963.1 similar to hexose phosphate transport system regulatory protein uhpC - Salmonella typhimurium NP_876964.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase NP_876965.1 similar to probable OMP - Chlamydia trachomatis NP_876966.1 similar to hypothetical protein CT547 - Chlamydia trachomatis NP_876967.1 similar to hypothetical protein CT548 - Chlamydia trachomatis NP_876968.1 similar to probable sigma regulatory factor-histidine kinase - Chlamydia trachomatis NP_876969.1 similar to hypothetical protein CT550 - Chlamydia trachomatis NP_876970.1 similar to serine-type D-Ala-D-Ala carboxypeptidase dacB family NP_876972.1 similar to hypothetical protein CT552 - Chlamydia trachomatis NP_876973.1 similar to fmu methyltransferase - Escherichia coli NP_876974.1 similar to hypothetical protein CT696 - Chlamydia trachomatis NP_876975.1 similar to hypothetical protein CT695 - Chlamydia trachomatis NP_876976.1 similar to hypothetical ywbM protein - Bacillus subtilis NP_876978.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway NP_876979.1 similar to phosphate permease family NP_876980.1 similar to hypothetical protein CT691 - Chlamydia trachomatis NP_876981.1 similar to dipeptide ABC transporter, ATP-binding protein family NP_876982.1 similar to dipeptide transport protein dppF - Escherichia coli NP_876984.1 similar to Soj antagonist, chromosome positioning and transport protein spo0J - Bacillus subtilis NP_876986.1 similar to hypothetical protein CT482 - Chlamydia trachomatis NP_876987.1 similar to hypothetical protein CT481 - Chlamydia trachomatis NP_876988.1 similar to probable nifS-related protein - Chlamydia trachomatis NP_876989.1 similar to probable ABC transporter membrane protein - Chlamydia trachomatis NP_876990.1 similar to ABC transporter ATPase family NP_876991.1 with SufCD activates cysteine desulfurase SufS NP_876992.1 similar to UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase - Rattus norvegicus NP_876993.1 similar to penicillin-binding protein 2 - Escherichia coli NP_876995.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit NP_876996.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu NP_876997.1 Catalyzes the phosphorylation of UMP to UDP NP_876998.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs NP_876999.1 similar to hypothetical protein CT676 - Chlamydia trachomatis NP_877000.1 similar to arginine kinase - Limulus polyphemus NP_877001.1 similar to outer membrane secretion protein Q - Pseudomonas alcaligenes NP_877002.1 similar to serine/threonine-protein kinase family NP_877003.1 similar to flagellar motor switch protein fliN - Escherichia coli NP_877004.1 similar to hypothetical protein CT671 - Chlamydia trachomatis NP_877005.1 similar to hypothetical protein CT670 - Chlamydia trachomatis NP_877006.1 flagellar-type ATPase; similar to yopN (flagellar-type ATPase) proteins NP_877007.1 similar to hypothetical protein CT668 - Chlamydia trachomatis NP_877008.1 similar to hypothetical protein CT667 - Chlamydia trachomatis NP_877009.1 similar to hypothetical protein CT666 - Chlamydia trachomatis NP_877010.1 similar to hypothetical protein CT665 - Chlamydia trachomatis NP_877011.1 Forkhead domain protein NP_877012.1 similar to hypothetical protein CT663 - Chlamydia trachomatis NP_877013.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins NP_877015.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling NP_877016.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling NP_877017.1 similar to hypothetical protein CT656 - Chlamydia trachomatis NP_877018.1 similar to hypothetical protein CT657 - Chlamydia trachomatis NP_877019.1 similar to ribosomal large subunit pseudouridine synthase A - Escherichia coli NP_877020.1 similar to hypothetical protein CT659 - Chlamydia trachomatis NP_877021.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis NP_877022.1 similar to hypothetical protein dsk1 - Chlamydia psittaci NP_877023.1 similar to ABC transporter family NP_877025.1 similar to hypothetical protein CT652.1 - Chlamydia trachomatis NP_877026.1 similar to hypothetical protein CT620 - Chlamydia trachomatis NP_877027.1 similar to hypothetical protein CT619 - Chlamydia trachomatis NP_877028.1 similar to 76K protein, Chlamydia pneumoniae (AR-39) NP_877029.1 similar to 76K protein, Chlamydia pneumoniae (AR-39) NP_877030.1 virulence factor; similar to virulence factor mviN family NP_877032.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues NP_877033.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination NP_877034.1 similar to yceA protein - Escherichia coli NP_877035.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor NP_877036.1 similar to probable efflux protein - Chlamydia trachomatis NP_877037.1 similar to probable exodeoxyribonuclease V, gamma - Chlamydia trachomatis NP_877038.1 similar to exodeoxyribonuclease V 135K chain - Escherichia coli NP_877039.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall NP_877040.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate NP_877041.1 contains N-terminal domain of unknown function fused to transcription elongation factor; GreA is necessary for efficient RNA polymerization through arresting sites; cleaves the nascent transcript and allows resumption of transcription elongation NP_877042.1 similar to hypothetical protein CT635 - Chlamydia trachomatis NP_877043.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm NP_877044.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate NP_877046.1 similar to hypothetical protein CT632 - Chlamydia trachomatis NP_877047.1 similar to hypothetical protein CT631 - Chlamydia trachomatis NP_877048.1 similar to geranylgeranyl pyrophosphate synthase family NP_877049.1 similar to UDP-N-acetylglucosamine pyrophosphorylase - Bacillus subtilis NP_877050.1 similar to trans-activating transcription regulator tctD - Salmonella typhimurium NP_877051.1 similar to hypothetical protein CT651 - Chlamydia trachomatis NP_877052.1 similar to exonuclease V alpha-subunit recD - Escherichia coli NP_877053.1 similar to hypothetical protein CT618 - Chlamydia trachomatis NP_877054.2 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase NP_877055.1 similar to hypothetical protein CT616 - Chlamydia trachomatis NP_877056.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released NP_877057.1 similar to dihydroneopterin-triphosphate epimerase - Escherichia coli NP_877058.1 similar to dihydropteroate synthase - Pisum sativum NP_877059.1 similar to dihydrofolate reductase - Haemophilus influenzae NP_877060.1 similar to hypothetical protein CT611 - Chlamydia trachomatis NP_877061.1 similar to coenzyme pyrrolo-quinoline-quinone biosynthesis protein - Acinetobacter calcoaceticus NP_877062.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs NP_877063.1 similar to 5-formyltetrahydrofolate cyclo-ligase - Oryctolagus cuniculus NP_877064.1 similar to hypothetical protein CT648 - Chlamydia trachomatis NP_877065.1 similar to transcriptional activator Trip230 protein - Homo sapiens NP_877066.1 similar to hypothetical protein CT646 - Chlamydia trachomatis NP_877067.1 similar to hypothetical protein CT645 - Chlamydia trachomatis NP_877068.1 similar to nitrogen regulating protein nifR3 - Rhodobacter capsulatus NP_877069.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity NP_877070.1 similar to hypothetical protein CT642 - Chlamydia trachomatis NP_877071.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen NP_877072.1 DNA helicase; similar to DNA helicase uvrD family NP_877073.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine NP_877074.1 similar to hypothetical protein CT606.1 - Chlamydia trachomatis NP_877075.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine NP_877076.1 similar to hypothetical protein CT605 - Chlamydia trachomatis NP_877077.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth NP_877078.1 similar to Hordeum vulgare 2-cys peroxiredoxin BAS1 precursor; thiol-specific antioxidant protein fragment NP_877079.1 similar to hypothetical protein CT602 - Chlamydia trachomatis NP_877080.1 invasin related protein; similar to protein p60 precursor (invasin related protein) - Listeria grayi NP_877081.1 similar to peptidoglycan-associated lipoprotein precursor - Escherichia coli NP_877082.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA NP_877083.1 similar to hypothetical protein CT598 - Chlamydia trachomatis NP_877084.1 biopolymer transport protein; similar to biopolymer transport exbD protein - Escherichia coli NP_877085.1 biopolymer transport protein; similar to biopolymer transport exbB protein - Escherichia coli NP_877086.1 similar to thiol:disulfide interchange protein dsbD - Escherichia coli NP_877087.1 similar to mttC protein - Escherichia coli NP_877088.1 similar to succinate dehydrogenase subunit C - Bacillus macerans NP_877089.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol NP_877090.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase NP_877091.1 similar to hypothetical protein CT590 - Chlamydia trachomatis NP_877092.1 similar to probable sigma regulatory protein-pp2c phosphatase - Chlamydia trachomatis NP_877093.1 similar to regulator of sigma-B activity rsbU - Bacillus subtilis NP_877101.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis NP_877102.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion NP_877103.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_877104.1 similar to hypothetical protein CT584 - Chlamydia trachomati NP_877105.1 similar to plasmid virulence protein pGP6-D (ORF6) - Chlamydia trachomatis NP_877106.1 similar to Spo0A activation inhibitor soj - Bacillus subtilis NP_877107.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) NP_877108.1 similar to hypothetical protein CT580 - Chlamydia trachomatis NP_877109.1 similar to hypothetical protein CT579 - Chlamydia trachomatis NP_877110.1 similar to hypothetical protein CT578 - Chlamydia trachomatis NP_877111.1 similar to hypothetical protein CT577 - Chlamydia trachomatis NP_877112.1 regulatory protein; similar to regulatory protein LcrH - Yersinia pestis NP_877113.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex NP_877114.1 similar to X-Pro aminopeptidase family NP_877115.1 similar to hypothetical protein CT573 - Chlamydia trachomatis NP_877116.1 similar to general secretion pathway protein D precursor - Aeromonas hydrophila NP_877117.1 secretion protein; similar to secretion protein xcpR - Pseudomonas aeruginosa NP_877118.1 secretion protein; similar to secretion protein xcpS - Pseudomonas alcaligenes NP_877119.1 similar to general secretion pathway protein g precursor - Vibrio cholerae NP_877120.1 similar to hypothetical protein CT568 - Chlamydia trachomatis NP_877121.1 similar to hypothetical protein CT567 - Chlamydia trachomatis NP_877122.1 similar to hypothetical protein CT566 - Chlamydia trachomatis NP_877123.1 similar to hypothetical protein CT565 - Chlamydia trachomatis NP_877124.1 similar to YOP proteins translocation protein T - Yersinia pestis NP_877125.1 similar to YOP proteins translocation protein S - Yersinia pestis NP_877126.1 secretion protein; similar to yscR secretion protein - Yersinia pestis NP_877127.1 similar to YOP proteins translocation protein L - Yersinia pseudotuberculosis NP_877128.1 similar to hypothetical protein CT560 - Chlamydia trachomatis NP_877129.1 similar to secretion protein family NP_877133.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group NP_877134.1 E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide NP_877135.1 similar to hypothetical protein CT556 - Chlamydia trachomatis NP_877136.1 similar to SNF protein - Bacillus cereus NP_877137.1 similar to branched-chain amino acid transporter brnQ - Bacillus subtilis NP_877138.1 similar to endonuclease III (DNA repair) - Bacillus subtilis NP_877139.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE NP_877140.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine NP_877141.1 similar to hypothetical protein CT700 - Chlamydia trachomatis NP_877142.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins NP_877144.1 similar to hypothetical protein CT702 - Chlamydia trachomatis NP_877145.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains NP_877146.1 similar to poly(A) polymerase - Bacillus subtilis NP_877147.1 binds and unfolds substrates as part of the ClpXP protease NP_877148.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates NP_877149.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer NP_877150.1 similar to swf/snf helicase family NP_877151.1 similar to rod shape-determining protein - Bacillus subtilis NP_877152.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP NP_877153.1 similar to hypothetical protein CT711 - Chlamydia trachomatis NP_877154.1 similar to hypothetical protein CT712 - Chlamydia trachomatis NP_877155.1 similar to major outer membrane protein - Chlamydia trachomatis NP_877156.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate NP_877157.1 similar to UDP-N-acetylglucosamine pyrophosphorylase - Homo sapiens NP_877158.1 similar to hypothetical protein CT716 - Chlamydia trachomatis NP_877159.1 FliI; involved in type III protein export NP_877160.1 similar to hypothetical protein CT718 - Chlamydia trachomatis NP_877161.1 similar to flagellar motor switch protein - Treponema denticola NP_877162.1 similar to nifU-like protein - Helicobacter pylori NP_877163.1 similar to nitrogen fixation protein nifS - Anabaena sp. NP_877164.1 catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate NP_877165.1 similar to probable pseudouridine synthase - Chlamydia trachomatis NP_877166.1 similar to hypothetical protein CT724 - Chlamydia trachomatis NP_877167.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon NP_877168.1 similar to stage V sporulation protein E - Bacillus subtilis NP_877169.1 similar to copper-transporting ATPase copA - Enterococcus hirae NP_877170.1 similar to hypothetical protein CT728 - Chlamydia trachomatis NP_877171.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_877172.1 similar to riboflavin-specific deaminase - Escherichia coli NP_877173.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate NP_877174.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not NP_877175.1 similar to hypothetical protein CT733 - Chlamydia trachomatis NP_877176.1 similar to hypothetical protein CT734 - Chlamydia trachomatis NP_877177.1 similar to D-alanine/glycine transport protein, sodium-dependent - Alteromonas haloplanktis NP_877178.1 similar to hypothetical protein ybcL - Chlamydia trachomatis NP_877179.1 similar to probable set domain protein - Chlamydia trachomatis NP_877180.1 similar to probable metal dependent hydrolase - Chlamydia trachomatis NP_877181.1 similar to DNA translocase spoIIIE - Bacillus subtilis NP_877184.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm NP_877185.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex NP_877186.1 similar to protein Hom1 - Chlamydia trachomatis NP_877188.1 similar to histone H1-like protein - Chlamydia psittaci NP_877190.1 similar to probable chltr phosphoprotein - Chlamydia trachomatis NP_877191.1 catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX NP_877192.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III NP_877193.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III NP_877194.1 similar to transcription-repair coupling factor - Listeria monocytogenes NP_877195.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_877196.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase NP_877197.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile NP_877198.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA NP_877199.1 similar to hypothetical protein CT753 - Chlamydia trachomatis NP_877200.1 similar to 3,5'-cyclic-nucleotide phosphodiesterase cpdA - Escherichia coli' NP_877201.1 similar to chaperonin HSP60 - Clostridium perfringens NP_877203.1 similar to UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase - Synechocystis sp. NP_877204.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan NP_877205.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation NP_877206.1 similar to cell wall hydrolase lytE - Bacillus subtilis NP_877207.1 similar to stage V sporulation protein E - Bacillus subtilis NP_877208.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis NP_877209.1 catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine and catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis NP_877210.1 similar to hypothetical protein CT763 - Chlamydia trachomati NP_877211.1 similar to divalent cation tolerance protein cutA1 - Escherichia coli NP_877212.1 similar to hypothetical protein CT764 - Chlamydia trachomatis NP_877213.1 similar to sigma-F 5-region regulatory protein spoIIAA - Bacillus subtilis NP_877214.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity NP_877215.1 similar to hypothetical protein HP0656 - Helicobacter pylori NP_877216.1 similar to hypothetical protein CT768 - Chlamydia trachomatis NP_877219.1 similar to iojap gene - Zea mays NP_877220.1 FabF, beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP. NP_877221.1 AP4A Hydrolase; similar to diadenosine tetraphosphatase (AP4A Hydrolase) - Pyrobaculum aerophilum NP_877222.1 catalyzes the hydrolysis of pyrophosphate to phosphate NP_877223.1 similar to leucine dehydrogenase - Bacillus stearothermophilus NP_877224.1 similar to bisphosphonucleoside 3(2')-phosphohydrolase SAL1 - Arabidopsis thaliana NP_877225.1 similar to 2-acylglycerophosphoethanolamine acyl transferase/acyl carrier - Escherichia coli NP_877226.1 Synthesizes thioester adducts of fatty acids enzymatically to the phosphopantetheine group of acyl carrier protein NP_877227.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine NP_877228.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity NP_877229.1 similar to hypothetical protein CT779 - Chlamydia trachomatis NP_877230.1 similar to probable thioredoxin disulfide isomerase - Chlamydia trachomatis NP_877231.1 similar to hypothetical protein - Chlamydia psittaci NP_877232.1 similar to hypothetical protein - Chlamydia psittaci NP_877233.1 similar to hypothetical protein - Chlamydia psittaci NP_877237.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 NP_877238.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA NP_877239.1 similar to probable disulfide bond isomerase - Chlamydia trachomatis NP_877240.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates NP_877241.1 in Escherichia coli transcription of this gene is enhanced by polyamines NP_877242.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif NP_877243.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif NP_877244.1 similar to hypothetical protein CT788 - Chlamydia trachomatis NP_877245.1 similar to N5-(1-carboxyethyl)-L-ornithine synthase - Lactococcus lactis NP_877246.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision NP_877247.1 DNA mismatch repair protein; This protein performs the mismatch recognition step during the DNA repair process NP_877249.1 synthesizes RNA primers at the replication forks NP_877250.1 similar to hypothetical protein CT794.1 - Chlamydia trachomatis NP_877252.1 similar to hypothetical protein CT795 - Chlamydia trachomatis NP_877253.1 similar to glycyl-tRNA synthetase family NP_877255.1 similar to CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase family NP_877256.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose NP_877258.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response NP_877259.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation NP_877260.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 NP_877261.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit NP_877262.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk NP_877263.1 catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis NP_877264.1 similar to probable kinase - Chlamydia trachomatis [contains framshift] NP_877265.1 similar to hypothetical protein CT805 - Chlamydia trachomatis NP_877266.1 similar to protein-degrading enzymes NP_877267.1 similar to glycerol-3-phosphate acyltransferase family NP_877268.1 similar to cytosolic axial filament protein cafA and ribonuclease E - Escherichia coli NP_877269.1 similar to hypothetical protein CT809 - Chlamydia trachomatis NP_877270.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not NP_877271.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY NP_877272.1 similar to outer membrane protein 11 - Chlamydiae pneumoniae, strain VR1310 NP_877274.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate; lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM NP_877275.1 similar to poly(A) polymerase family NP_877276.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate NP_877277.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source NP_877278.1 similar to tyrosine-specific transport protein - Escherichia coli NP_877279.1 similar to probable transport permease - Chlamydia trachomatis NP_877280.1 similar to ftsY cell division protein family NP_877281.1 catalyzes the interconversion of succinyl-CoA and succinate NP_877282.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle NP_877288.1 similar to serine protease DO family; HtrA NP_877289.1 similar to hypothetical protein - Schizosaccharomyces pombe NP_877290.1 similar to Chlamydia trachomatis zinc metalloproteinase; insulinase family NP_877291.1 similar to hypothetical protein CT825 - Chlamydia trachomatis NP_877292.1 similar to CDP-diacylglycerol-serine O-phosphatidyltransferase - Bacillus subtilis NP_877293.1 catalyzes the rate-limiting step in dNTP synthesis NP_877294.1 Catalyzes the rate-limiting step in dNTP synthesis NP_877295.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine NP_877296.1 similar to probable rRNA methylase - Chlamydia trachomatis NP_877297.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis NP_877298.1 Regulates rRNA biosynthesis by transcriptional antitermination NP_877300.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits NP_877301.1 similar to ribosomal protein L35 family NP_877302.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit NP_877303.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily NP_877304.1 similar to hypothetical protein CT837 - Chlamydia trachomatis NP_877305.1 similar to hypothetical protein CT838 - Chlamydia trachomatis NP_877306.1 similar to hypothetical protein CT839 - Chlamydia trachomatis NP_877307.1 similar to probable p-loop ATPase - Chlamydia trachomatis NP_877308.1 cell division protein; similar to cell division protein ftsH family NP_877309.1 similar to polyribonucleotide nucleotidyltransferase family NP_877310.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence NP_877311.1 similar to probable cytosine deaminase - Chlamydia trachomatis NP_877312.1 similar to hypothetical protein CT845 - Chlamydia trachomatis NP_877313.1 similar to hypothetical protein CT846 - Chlamydia trachomatis NP_877314.1 similar to hypothetical protein CT847 - Chlamydia trachomatis NP_877315.1 similar to hypothetical protein CT848 - Chlamydia trachomatis NP_877316.1 similar to hypothetical protein CT849 - Chlamydia trachomatis NP_877317.1 similar to hypothetical protein CT849.1 - Chlamydia trachomatis NP_877318.1 similar to hypothetical protein CT850 - Chlamydia trachomatis NP_877319.2 catalyzes the removal of N-terminal amino acids from peptides and arylamides NP_877320.1 similar to hypothetical protein CT852 - Chlamydia trachomatis NP_877321.1 similar to hypothetical protein CT853 - Chlamydia trachomatis NP_877322.1 similar to ABC transporter family NP_877323.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle NP_877324.1 similar to sulfate transporter family NP_877325.1 similar to hypothetical protein CT858 - Chlamydia trachomatis NP_877326.1 similar to hypothetical protein CT858 - Chlamydia trachomatis NP_877327.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway NP_877329.1 similar to hypothetical protein CT860 - Chlamydia trachomatis NP_877331.1 similar to hypothetical protein CT861 - Chlamydia trachomatis NP_877332.1 similar to chaperone SycD - Yersinia enterocolitica NP_877333.1 similar to hypothetical protein CT863 - Chlamydia trachomatis NP_877335.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs NP_877336.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family NP_877337.1 similar to late stage protein - Chlamydia trachomatis NP_877339.1 catalyzes the oxidation of malate to oxaloacetate NP_877341.1 similar to probable D-amino acid dehydrogenase - Chlamydia trachomatis NP_877343.1 similar to arginine/ornithine antiporter proteins NP_877344.1 similar to hypothetical protein CT373 - Chlamydia trachomatis NP_877345.1 similar to hypothetical protein CT372 - Chlamydia trachomatis NP_877346.1 similar to probable outer membrane protein - Chlamydia trachomatis NP_877347.2 AroDE; bifunctional enzyme; can convert 3-dehydroquinate to 3-dehydroshkimate and then to shikimate; involved in the synthesis of aromatic amino acids and other metabolites; type I 3-DHQase NP_877348.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis NP_877349.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis NP_877350.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis NP_877351.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis NP_877353.1 similar to adenosylmethionine--8-amino-7-oxononanoate transaminase - Bacillus sphaericus NP_877354.1 similar to dethiobiotin synthase - Bacillus sphaericus NP_877355.1 similar to 8-amino-7-oxononanoate synthase family NP_877356.1 similar to biotin synthetase family NP_877357.1 similar to hypothetical protein ypdP - Bacillus subtilis NP_877358.1 catalyzes the formation of tyrosine, dihydroxyphenylalanine, and 5-hydroxytryptophan from phenylalanine, tyrosine, and tryptophan respectively NP_877359.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis NP_877361.1 catalyzes the formation of aspartate semialdehyde from aspartyl phosphate NP_877362.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP NP_877363.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis NP_877368.1 similar to hb4 protein, Chlamydia pneumoniae strain VR1310 NP_877369.1 similar to pHB5 protein, Chlamydia pneumoniae NP_877370.1 similar to hypothetical protein yyaL - Bacillus subtilis NP_877371.1 similar to hypothetical protein CT355 - Chlamydia trachomatis NP_877372.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin NP_877373.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate NP_877374.1 similar to hypothetical protein CT330 - Chlamydia trachomatis NP_877375.1 catalyzes the bidirectional exonucleolytic cleavage of DNA NP_877376.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides NP_877377.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate NP_877382.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) NP_877383.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids NP_877385.1 similar to probable hth transcription regulator - Chlamydia trachomatis NP_877388.1 similar to probable outer membrane protein - Chlamydia trachomatis NP_877389.1 similar to probable outer membrane protein - Chlamydia trachomatis