-- dump date 20140619_040537 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 182082000001 SEQ_END SEQ_END NC_005043.1 1225935 1225935 DR NC_005043.1; contig end 1225935..1225935 Chlamydophila pneumoniae TW-183 NP_876277.1 CDS CpB0001 NC_005043.1 1 282 R similar to hypothetical protein CT001 - Chlamydia trachomatis; hypothetical protein complement(1..282) Chlamydophila pneumoniae TW-183 1466684 NP_876278.1 CDS CpB0002 NC_005043.1 417 569 D hypothetical protein 417..569 Chlamydophila pneumoniae TW-183 1466685 NP_876279.1 CDS gatC NC_005043.1 573 878 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 573..878 Chlamydophila pneumoniae TW-183 1466686 NP_876280.1 CDS gatA NC_005043.1 895 2373 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 895..2373 Chlamydophila pneumoniae TW-183 1466687 NP_876281.1 CDS gatB NC_005043.1 2370 3836 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 2370..3836 Chlamydophila pneumoniae TW-183 1466688 NP_876282.1 CDS CpB0006 NC_005043.1 4127 6895 D outer membrane protein 6; hypothetical protein 4127..6895 Chlamydophila pneumoniae TW-183 1466689 NP_876283.1 CDS CpB0007 NC_005043.1 7138 7293 R hypothetical protein complement(7138..7293) Chlamydophila pneumoniae TW-183 1466690 NP_876284.1 CDS CpB0008 NC_005043.1 7605 10499 D similar to HB1 protein, Chlamydia pneumoniae strain VR1310; hypothetical protein 7605..10499 Chlamydophila pneumoniae TW-183 1466691 NP_876285.1 CDS CpB0009 NC_005043.1 10864 11688 D similar to HB2 protein, Chlamydia pneumoniae strain VR1310; hypothetical protein 10864..11688 Chlamydophila pneumoniae TW-183 1466692 NP_876286.1 CDS CpB0010 NC_005043.1 11815 13122 D similar to HB3 protein, Chlamydia pneumoniae strain VR1310; hypothetical protein 11815..13122 Chlamydophila pneumoniae TW-183 1466693 NP_876287.1 CDS CpB0011 NC_005043.1 13323 13598 D similar to HB2 protein, Chlamydia pneumoniae strain, strain VR1310; HB2 protein 13323..13598 Chlamydophila pneumoniae TW-183 1466694 NP_876288.1 CDS CpB0012 NC_005043.1 13692 15749 D similar to HB2 and HB5 protein, Chlamydia pneumoniae, strain VR1310; hypothetical protein 13692..15749 Chlamydophila pneumoniae TW-183 1466695 NP_876289.1 CDS CpB0013 NC_005043.1 15892 16617 D similar to HB6 protein, Chlamydia pneumoniae, strain VR1310; hypothetical protein 15892..16617 Chlamydophila pneumoniae TW-183 1466696 NP_876290.1 CDS CpB0014 NC_005043.1 16644 18215 D similar to HB7 protein, Chlamydia pneumoniae, strain VR1310; hypothetical protein 16644..18215 Chlamydophila pneumoniae TW-183 1466697 NP_876291.1 CDS CpB0015 NC_005043.1 18563 20722 D similar to outer membrane protein 7 - Chlamydia pneumoniae, strain VR1310; hypothetical protein 18563..20722 Chlamydophila pneumoniae TW-183 1466698 NP_876292.1 CDS CpB0016 NC_005043.1 20653 21108 D similar to outer membrane protein 5 - Chlamydia pneumoniae, strain VR1310; hypothetical protein 20653..21108 Chlamydophila pneumoniae TW-183 1466699 NP_876293.1 CDS CpB0017 NC_005043.1 21391 21924 D similar to to outer membrane protein 5 - Chlamydia pneumoniae, strain VR1310; to outer membrane protein 5 21391..21924 Chlamydophila pneumoniae TW-183 1466700 NP_876294.1 CDS CpB0018 NC_005043.1 21858 24176 D similar to outer membrane protein 5 - Chlamydia pneumoniae train VR1310; hypothetical protein 21858..24176 Chlamydophila pneumoniae TW-183 1466701 NP_876295.1 CDS CpB0019 NC_005043.1 24415 26190 D similar to outer membrane protein 5 - Chlamydia pneumoniae strain VR1310; hypothetical protein 24415..26190 Chlamydophila pneumoniae TW-183 1466702 NP_876296.1 CDS CpB0020 NC_005043.1 26108 27172 D similar to outer membrane protein 5 - Chlamydia pneumoniae, strain VR1310; hypothetical protein 26108..27172 Chlamydophila pneumoniae TW-183 1466703 NP_876297.1 CDS CpB0021 NC_005043.1 27317 27505 D hypothetical protein 27317..27505 Chlamydophila pneumoniae TW-183 1466704 NP_876298.1 CDS CpB0022 NC_005043.1 27521 29005 D similar to outer membrane protein 11 - Chlamydia pneumoniae strain VR1310; hypothetical protein 27521..29005 Chlamydophila pneumoniae TW-183 1466705 NP_876299.1 CDS CpB0023 NC_005043.1 29021 30358 D similar to outer membrane protein 5 - Chlamydia pneumoniae strain VR1310; hypothetical protein 29021..30358 Chlamydophila pneumoniae TW-183 1466706 NP_876300.1 CDS CpB0024 NC_005043.1 30599 32713 R similar to probable outer membrane protein CT351 - Chlamydia trachomatis; outer membrane protein complement(30599..32713) Chlamydophila pneumoniae TW-183 1466707 NP_876301.1 CDS CpB0025 NC_005043.1 32703 34409 R similar to probable outer membrane protein CT350 - Chlamydia trachomatis; outer membrane protein complement(32703..34409) Chlamydophila pneumoniae TW-183 1466708 NP_876302.1 CDS maf NC_005043.1 34391 34981 R Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein complement(34391..34981) Chlamydophila pneumoniae TW-183 1466709 NP_876303.1 CDS CpB0027 NC_005043.1 35010 36614 R similar to probable ABC transporter protein ATPase - Chlamydia trachomatis; ABC transporter protein ATPase complement(35010..36614) Chlamydophila pneumoniae TW-183 1466710 NP_876304.1 CDS xerC NC_005043.1 36657 37595 R site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC complement(36657..37595) Chlamydophila pneumoniae TW-183 1466711 NP_876305.1 CDS CpB0029 NC_005043.1 37680 38603 R member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z complement(37680..38603) Chlamydophila pneumoniae TW-183 1466712 NP_876306.1 CDS CpB0030 NC_005043.1 38758 39624 R hypothetical protein complement(38758..39624) Chlamydophila pneumoniae TW-183 1466713 NP_876307.1 CDS CpB0031 NC_005043.1 39774 42233 R similar to lon ATP-dependent proteinase family; lon ATP-dependent proteinase complement(39774..42233) Chlamydophila pneumoniae TW-183 1466714 NP_876308.1 CDS CpB0032 NC_005043.1 42539 43324 R hypothetical protein complement(42539..43324) Chlamydophila pneumoniae TW-183 1466715 NP_876309.1 CDS CpB0033 NC_005043.1 43386 43754 R hypothetical protein complement(43386..43754) Chlamydophila pneumoniae TW-183 1466716 NP_876310.1 CDS CpB0034 NC_005043.1 43890 44531 D similar to probable o-sialoglycoprotein endopeptidase - Chlamydia trachomatis; o-sialoglycoprotein endopeptidase 43890..44531 Chlamydophila pneumoniae TW-183 1466717 NP_876311.1 CDS rpsU NC_005043.1 44710 44886 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 44710..44886 Chlamydophila pneumoniae TW-183 1466718 NP_876312.1 CDS CpB0036 NC_005043.1 44922 46100 D chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ 44922..46100 Chlamydophila pneumoniae TW-183 1466719 NP_876313.1 CDS CpB0037 NC_005043.1 46137 48173 D similar to 2-oxoisovalerate dehydrogenase alpha and beta subunit family fusion protein; 2-oxoisovalerate dehydrogenase alpha and beta subunit 46137..48173 Chlamydophila pneumoniae TW-183 1466720 NP_876314.1 CDS CpB0038 NC_005043.1 48206 49456 R hypothetical protein complement(48206..49456) Chlamydophila pneumoniae TW-183 1466721 NP_876315.1 CDS CpB0039 NC_005043.1 49565 51028 R similar to competence locus E homolog - Synechocystis sp.; hypothetical protein complement(49565..51028) Chlamydophila pneumoniae TW-183 1466722 NP_876316.1 CDS CpB0040 NC_005043.1 51001 51798 D similar to hypothetical protein CT338 - Chlamydia trachomatis; hypothetical protein 51001..51798 Chlamydophila pneumoniae TW-183 1466723 NP_876317.1 CDS CpB0041 NC_005043.1 51791 52117 D similar to phosphotransferase system phosphohistidine-containing protein - Bacillus subtilis; phosphotransferase system phosphohistidine-containing protein 51791..52117 Chlamydophila pneumoniae TW-183 1466724 NP_876318.1 CDS CpB0042 NC_005043.1 52118 53833 D similar to phosphoenolpyruvate-protein phosphotransferase - Bacillus stearothermophilus; phosphoenolpyruvate-protein phosphotransferase 52118..53833 Chlamydophila pneumoniae TW-183 1466725 NP_876319.1 CDS CpB0043 NC_005043.1 53959 54249 R similar to hypothetical protein CT335 - Chlamydia trachomatis; hypothetical protein complement(53959..54249) Chlamydophila pneumoniae TW-183 1466726 NP_876320.1 CDS CpB0044 NC_005043.1 54314 55642 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau complement(54314..55642) Chlamydophila pneumoniae TW-183 1466727 NP_876321.1 CDS CpB0045 NC_005043.1 55995 57344 D similar to HB2 protein, Chlamydia pneumoniae, strain VR1310; hypothetical protein 55995..57344 Chlamydophila pneumoniae TW-183 1466728 NP_876322.1 CDS CpB0046 NC_005043.1 57402 58184 D similiarity to HB5 protein, Chlamydia pneumoniae, strain VR1310; hypothetical protein 57402..58184 Chlamydophila pneumoniae TW-183 1466729 NP_876323.1 CDS CpB0047 NC_005043.1 58555 60762 D similar to HB3/HB4 protein, Chlamydia pneumoniae; fusion protein; HB3/HB4 fusion protein 58555..60762 Chlamydophila pneumoniae TW-183 1466730 NP_876324.1 CDS CpB0048 NC_005043.1 60951 61151 D hypothetical protein 60951..61151 Chlamydophila pneumoniae TW-183 1466731 NP_876325.1 CDS CpB0049 NC_005043.1 61183 63300 D similar to hypothetical protein yqfF - Bacillus subtilis; hypothetical protein 61183..63300 Chlamydophila pneumoniae TW-183 1466732 NP_876326.1 CDS CpB0050 NC_005043.1 63310 63792 R hypothetical protein complement(63310..63792) Chlamydophila pneumoniae TW-183 1466733 NP_876327.1 CDS CpB0051 NC_005043.1 63992 64309 R hypothetical protein complement(63992..64309) Chlamydophila pneumoniae TW-183 1466734 NP_876328.1 CDS CpB0052 NC_005043.1 64329 64610 D hypothetical protein 64329..64610 Chlamydophila pneumoniae TW-183 1466735 NP_876329.1 CDS CpB0053 NC_005043.1 64797 65501 R transformation of prophobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase complement(64797..65501) Chlamydophila pneumoniae TW-183 1466736 NP_876330.1 CDS CpB0054 NC_005043.1 65479 66840 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(65479..66840) Chlamydophila pneumoniae TW-183 1466737 NP_876331.1 CDS rnc NC_005043.1 66806 67519 R cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III complement(66806..67519) Chlamydophila pneumoniae TW-183 1466738 NP_876332.1 CDS CpB0056 NC_005043.1 67625 68089 D similar to hypothetical protein CT296 - Chlamydia trachomatis; hypothetical protein 67625..68089 Chlamydophila pneumoniae TW-183 1466739 NP_876333.1 CDS CpB0057 NC_005043.1 68449 70245 D similar to phosphomannomutase family; phosphomannomutase 68449..70245 Chlamydophila pneumoniae TW-183 1466740 NP_876334.1 CDS CpB0058 NC_005043.1 70430 71053 D similar to manganese superoxide dismutase precursor - Caenorhabditis elegans; manganese superoxide dismutase precursor 70430..71053 Chlamydophila pneumoniae TW-183 1466741 NP_876335.1 CDS CpB0059 NC_005043.1 71135 72061 D catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 71135..72061 Chlamydophila pneumoniae TW-183 1466742 NP_876336.1 CDS dut NC_005043.1 72112 72549 D catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 72112..72549 Chlamydophila pneumoniae TW-183 1466743 NP_876337.1 CDS fruA NC_005043.1 72527 73027 D similar to PTS fructose-specific enzyme IIBC component fruA - Bacillus subtilis; PTS fructose-specific enzyme IIBC component 72527..73027 Chlamydophila pneumoniae TW-183 1466744 NP_876338.1 CDS ptsN NC_005043.1 73030 73707 D similar to phosphotransferase system enzyme II ptsN - Escherichia coli; phosphotransferase system enzyme II 73030..73707 Chlamydophila pneumoniae TW-183 1466745 NP_876339.1 CDS mst101 NC_005043.1 73804 75189 D similar to sperm tail-specific protein mst101(2) - Drosophila hydei; hypothetical protein 73804..75189 Chlamydophila pneumoniae TW-183 1466746 NP_876340.1 CDS CpB0064 NC_005043.1 75468 75728 D hypothetical protein 75468..75728 Chlamydophila pneumoniae TW-183 1466747 NP_876341.1 CDS CpB0065 NC_005043.1 75842 76075 D hypothetical protein 75842..76075 Chlamydophila pneumoniae TW-183 1466748 NP_876342.1 CDS CpB0066 NC_005043.1 76399 78150 D similar to hypothetical protein CT288 - Chlamydia trachomatis; hypothetical protein 76399..78150 Chlamydophila pneumoniae TW-183 1466749 NP_876343.1 CDS CpB0067 NC_005043.1 78421 80154 D similar to hypothetical protein CT326 - Chlamydia trachomatis; hypothetical protein 78421..80154 Chlamydophila pneumoniae TW-183 1466750 NP_876344.1 CDS CpB0068 NC_005043.1 80449 81552 D hypothetical protein 80449..81552 Chlamydophila pneumoniae TW-183 1466751 NP_876345.1 CDS CpB0069 NC_005043.1 81824 82399 R similar to F25H5.5 - Caenorhabditis elegans; hypothetical protein complement(81824..82399) Chlamydophila pneumoniae TW-183 1466752 NP_876346.1 CDS CpB0070 NC_005043.1 83022 84584 D similar to hypothetical protein CT326 - Chlamydia trachomatis; hypothetical protein 83022..84584 Chlamydophila pneumoniae TW-183 1466753 NP_876347.1 CDS CpB0071 NC_005043.1 85090 85539 R similar to hypothetical protein CT325 - Chlamydia trachomatis; hypothetical protein complement(85090..85539) Chlamydophila pneumoniae TW-183 1466754 NP_876348.1 CDS CpB0072 NC_005043.1 85548 86579 R similar to hypothetical protein CT324 - Chlamydia trachomatis; hypothetical protein complement(85548..86579) Chlamydophila pneumoniae TW-183 1466755 NP_876349.1 CDS infA NC_005043.1 86850 87071 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 86850..87071 Chlamydophila pneumoniae TW-183 1466756 NP_876350.1 CDS tuf NC_005043.1 87268 88452 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 87268..88452 Chlamydophila pneumoniae TW-183 1466757 NP_876351.1 CDS secE NC_005043.1 88596 88847 D forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 88596..88847 Chlamydophila pneumoniae TW-183 1466758 NP_876352.1 CDS nusG NC_005043.1 88852 89400 D Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 88852..89400 Chlamydophila pneumoniae TW-183 1466759 NP_876353.1 CDS rplK NC_005043.1 89507 89932 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 89507..89932 Chlamydophila pneumoniae TW-183 1466760 NP_876354.1 CDS rplA NC_005043.1 89959 90657 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 89959..90657 Chlamydophila pneumoniae TW-183 1466761 NP_876355.1 CDS rplJ NC_005043.1 90673 91185 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 90673..91185 Chlamydophila pneumoniae TW-183 1466762 NP_876356.1 CDS rplL NC_005043.1 91229 91618 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 91229..91618 Chlamydophila pneumoniae TW-183 1466763 NP_876357.1 CDS rpoB NC_005043.1 91755 95513 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 91755..95513 Chlamydophila pneumoniae TW-183 1466764 NP_876358.1 CDS CpB0082 NC_005043.1 95537 99718 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 95537..99718 Chlamydophila pneumoniae TW-183 1466765 NP_876359.1 CDS CpB0083 NC_005043.1 99827 100810 D Maintains the balance of metabolites in the pentose-phosphate pathway; transaldolase B 99827..100810 Chlamydophila pneumoniae TW-183 1466766 NP_876360.1 CDS CpB0084 NC_005043.1 100869 101249 D similar to probable predied ferredoxin - Chlamydia trachomatis; predied ferredoxin 100869..101249 Chlamydophila pneumoniae TW-183 1466767 NP_876361.1 CDS CpB0085 NC_005043.1 101258 102001 R similar to hypothetical protein CT311 - Chlamydia trachomatis; hypothetical protein complement(101258..102001) Chlamydophila pneumoniae TW-183 1466768 NP_876362.1 CDS HrpE NC_005043.1 102399 103025 D produces ATP from ADP in the presence of a proton gradient across the membrane; the E subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit E 102399..103025 Chlamydophila pneumoniae TW-183 1466769 NP_876363.1 CDS CpB0087 NC_005043.1 103074 103874 D similar to hypothetical protein CT309 - Chlamydia trachomatis; hypothetical protein 103074..103874 Chlamydophila pneumoniae TW-183 1466770 NP_876364.1 CDS CpB0088 NC_005043.1 103868 105643 D produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit A 103868..105643 Chlamydophila pneumoniae TW-183 1466771 NP_876365.1 CDS CpB0089 NC_005043.1 105648 106964 D produces ATP from ADP in the presence of a proton gradient across the membrane; the B subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit B 105648..106964 Chlamydophila pneumoniae TW-183 1466772 NP_876366.2 CDS CpB0090 NC_005043.1 106949 107578 D produces ATP from ADP in the presence of a proton gradient across the membrane; the D subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit D 106949..107578 Chlamydophila pneumoniae TW-183 1466773 NP_876367.1 CDS ntpI NC_005043.1 107569 109551 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I is part of the membrane proton channel.; V-type ATP synthase subunit I 107569..109551 Chlamydophila pneumoniae TW-183 1466774 NP_876368.1 CDS CpB0092 NC_005043.1 109646 110071 D produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits; V-type ATP synthase subunit K 109646..110071 Chlamydophila pneumoniae TW-183 1466775 NP_876369.1 CDS CpB0093 NC_005043.1 109950 110513 D similar to hypothetical protein CT303 - Chlamydia trachomatis; hypothetical protein 109950..110513 Chlamydophila pneumoniae TW-183 1466776 NP_876370.1 CDS valS NC_005043.1 110647 113469 D valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 110647..113469 Chlamydophila pneumoniae TW-183 1466777 NP_876371.1 CDS pknD NC_005043.1 113490 116288 D PknD; responsible for phosphorylation of proteins on serine and threonine residues; similar to eukaryotic Ser/Thr kinases; in Chlamydia trachomatis itseems to interact with Pkn1, another serine/threonine-protein kinase; serine/threonine-protein kinase 113490..116288 Chlamydophila pneumoniae TW-183 1466778 NP_876372.1 CDS CpB0096 NC_005043.1 116329 121809 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(116329..121809) Chlamydophila pneumoniae TW-183 1466779 NP_876373.1 CDS CpB0097 NC_005043.1 122050 123504 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 122050..123504 Chlamydophila pneumoniae TW-183 1466780 NP_876374.1 CDS CpB0098 NC_005043.1 123598 124986 R Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase complement(123598..124986) Chlamydophila pneumoniae TW-183 1466781 NP_876375.1 CDS CpB0099 NC_005043.1 125039 125338 R hypothetical protein complement(125039..125338) Chlamydophila pneumoniae TW-183 1466782 NP_876376.1 CDS CpB0100 NC_005043.1 125374 126651 R similar to hypothetical protein CT011 - Chlamydia trachomatis; hypothetical protein complement(125374..126651) Chlamydophila pneumoniae TW-183 1466783 NP_876377.1 CDS CpB0101 NC_005043.1 126633 127472 R similar to hypothetical protein ybbP - Chlamydia trachomatis; hypothetical protein complement(126633..127472) Chlamydophila pneumoniae TW-183 1466784 NP_876378.1 CDS CpB0102 NC_005043.1 127618 128964 D similar to cytochrome oxidase chain I family; cytochrome oxidase chain I 127618..128964 Chlamydophila pneumoniae TW-183 1466785 NP_876379.1 CDS CpB0103 NC_005043.1 128975 130009 D similar to cytochrome oxidase chain II family; cytochrome oxidase chain II 128975..130009 Chlamydophila pneumoniae TW-183 1466786 NP_876380.1 CDS CpB0104 NC_005043.1 130168 131370 R similar to hypothetical protein CT017 - Chlamydia trachomatis; hypothetical protein complement(130168..131370) Chlamydophila pneumoniae TW-183 1466787 NP_876381.1 CDS CpB0105 NC_005043.1 131521 132375 R similar to hypothetical protein CT016 - Chlamydia trachomatis; hypothetical protein complement(131521..132375) Chlamydophila pneumoniae TW-183 1466788 NP_876382.2 CDS psiH NC_005043.1 132586 133872 D similar to phosphate starvation-inducible protein psiH - Escherichia coli; phosphate starvation-inducible protein 132586..133872 Chlamydophila pneumoniae TW-183 1466789 NP_876383.1 CDS CpB0107 NC_005043.1 133884 134621 R similar to hypothetical protein CT058 - Chlamydia trachomatis; hypothetical protein complement(133884..134621) Chlamydophila pneumoniae TW-183 1466790 NP_876384.1 CDS CpB0108 NC_005043.1 134795 135352 R similar to hypothetical protein CT018 - Chlamydia trachomatis; hypothetical protein complement(134795..135352) Chlamydophila pneumoniae TW-183 1466791 NP_876385.1 CDS CpB0109 NC_005043.1 135446 135601 R hypothetical protein complement(135446..135601) Chlamydophila pneumoniae TW-183 1466792 NP_876386.1 CDS ileS NC_005043.1 136150 139281 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase 136150..139281 Chlamydophila pneumoniae TW-183 1466793 NP_876387.1 CDS CpB0111 NC_005043.1 139319 141229 R similar to signal peptidase I - Salmonella typhimurium; signal peptidase I complement(139319..141229) Chlamydophila pneumoniae TW-183 1466794 NP_876388.1 CDS CpB0112 NC_005043.1 141426 142232 R similar to hypothetical protein CT021 - Chlamydia trachomatis; hypothetical protein complement(141426..142232) Chlamydophila pneumoniae TW-183 1466795 NP_876389.1 CDS rpmE2 NC_005043.1 142262 142591 D RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 142262..142591 Chlamydophila pneumoniae TW-183 1466796 NP_876390.1 CDS prfA NC_005043.1 142830 143903 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 142830..143903 Chlamydophila pneumoniae TW-183 1466797 NP_876391.1 CDS CpB0115 NC_005043.1 143869 144759 D HemK; PrmC; transfers a methyl group from S-adenosyl-methionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB possibly stimulating release of completed polypeptide chains; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 143869..144759 Chlamydophila pneumoniae TW-183 1466798 NP_876392.1 CDS ffh NC_005043.1 144774 146120 D similar to signal recognition particle chain ffh family; signal recognition particle chain 144774..146120 Chlamydophila pneumoniae TW-183 1466799 NP_876393.1 CDS rpsP NC_005043.1 146111 146470 D binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 146111..146470 Chlamydophila pneumoniae TW-183 1466800 NP_876394.1 CDS trmD NC_005043.1 146484 147569 D methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; Chlamydial proteins show a C-terminal extension of unknown function; tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein 146484..147569 Chlamydophila pneumoniae TW-183 1466801 NP_876395.1 CDS rplS NC_005043.1 147597 147962 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 147597..147962 Chlamydophila pneumoniae TW-183 1466802 NP_876396.1 CDS rnhB NC_005043.1 148018 148662 D RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 148018..148662 Chlamydophila pneumoniae TW-183 1466803 NP_876397.2 CDS gmk NC_005043.1 148659 149276 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 148659..149276 Chlamydophila pneumoniae TW-183 1466804 NP_876398.1 CDS CpB0122 NC_005043.1 149273 149566 D similar to hypothetical protein CT031 - Chlamydia trachomatis; hypothetical protein 149273..149566 Chlamydophila pneumoniae TW-183 1466805 NP_876399.1 CDS CpB0123 NC_005043.1 149566 151221 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 149566..151221 Chlamydophila pneumoniae TW-183 1466806 NP_876400.1 CDS CpB0124 NC_005043.1 151266 153464 R similar to exodeoxyribonuclease V 67K chain - Escherichia coli; exodeoxyribonuclease V complement(151266..153464) Chlamydophila pneumoniae TW-183 1466807 NP_876401.1 CDS CpB0125 NC_005043.1 154226 155566 D similar to HB1 protein, Chlamydia pneumoniae, strain VR1310; hypothetical protein 154226..155566 Chlamydophila pneumoniae TW-183 1466808 NP_876402.1 CDS CpB0126 NC_005043.1 155591 156103 D similar to HB7 protein, Chlamydia pneumoniae, strain VR1310; hypothetical protein 155591..156103 Chlamydophila pneumoniae TW-183 1466809 NP_876403.1 CDS CpB0127 NC_005043.1 156164 156316 R hypothetical protein complement(156164..156316) Chlamydophila pneumoniae TW-183 1466810 NP_876404.1 CDS CpB0128 NC_005043.1 156304 158583 D similar to HB7 protein, Chlamydia pneumoniae, strain VR1310; hypothetical protein 156304..158583 Chlamydophila pneumoniae TW-183 1466811 NP_876405.1 CDS CpB0129 NC_005043.1 158622 159638 R similar to probable cationic amino acid transporter - Chlamydia trachomatis; cationic amino acid transporter complement(158622..159638) Chlamydophila pneumoniae TW-183 1466812 NP_876406.1 CDS CpB0130 NC_005043.1 159772 160551 D similar to biotin--[acetyl-CoA-carboxylase] ligase - Saccharomyces cerevisiae; biotin--[acetyl-CoA-carboxylase] ligase 159772..160551 Chlamydophila pneumoniae TW-183 1466813 NP_876407.1 CDS CpB0131 NC_005043.1 160556 161740 R similar to hypothetical protein CT036 - Chlamydia trachomatis; hypothetical protein complement(160556..161740) Chlamydophila pneumoniae TW-183 1466814 NP_876408.1 CDS CpB0132 NC_005043.1 162056 163078 D hypothetical protein 162056..163078 Chlamydophila pneumoniae TW-183 1466815 NP_876409.1 CDS CpB0133 NC_005043.1 163082 164059 D hypothetical protein 163082..164059 Chlamydophila pneumoniae TW-183 1466816 NP_876410.1 CDS CpB0134 NC_005043.1 164056 164829 R similar to hypothetical protein CT109 - Chlamydia trachomatis; hypothetical protein complement(164056..164829) Chlamydophila pneumoniae TW-183 1466817 NP_876411.1 CDS groEL NC_005043.1 164959 166593 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL complement(164959..166593) Chlamydophila pneumoniae TW-183 1466818 NP_876412.1 CDS groES NC_005043.1 166635 166943 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(166635..166943) Chlamydophila pneumoniae TW-183 1466819 NP_876413.1 CDS CpB0137 NC_005043.1 167061 168896 R similar to oligoendopeptidase F - Lactococcus lactis; oligoendopeptidase F complement(167061..168896) Chlamydophila pneumoniae TW-183 1466820 NP_876414.1 CDS ybgI NC_005043.1 168994 169749 R similar to ybgI protein - Escherichia coli; hypothetical protein complement(168994..169749) Chlamydophila pneumoniae TW-183 1466821 NP_876415.1 CDS CpB0139 NC_005043.1 170192 171514 R catalyzes the formation of 5-aminolevulinate from (S)-4-amino-5-oxopentanoate; glutamate-1-semialdehyde aminotransferase complement(170192..171514) Chlamydophila pneumoniae TW-183 1466822 NP_876416.1 CDS CpB0140 NC_005043.1 171585 172151 R similar to hypothetical protein CT211 - Chlamydia trachomatis; hypothetical protein complement(171585..172151) Chlamydophila pneumoniae TW-183 1466823 NP_876417.1 CDS CpB0141 NC_005043.1 172165 172605 R similar to hypothetical protein CT212 - Chlamydia trachomatis; hypothetical protein complement(172165..172605) Chlamydophila pneumoniae TW-183 1466824 NP_876418.1 CDS CpB0142 NC_005043.1 172602 173297 R Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A complement(172602..173297) Chlamydophila pneumoniae TW-183 1466825 NP_876419.1 CDS CpB0143 NC_005043.1 173308 173586 R hypothetical protein complement(173308..173586) Chlamydophila pneumoniae TW-183 1466826 NP_876420.1 CDS CpB0144 NC_005043.1 173706 174830 R similar to hypothetical protein of GGAI-protein family cluster A - Chlamydia pneumoniae; hypothetical protein complement(173706..174830) Chlamydophila pneumoniae TW-183 1466827 NP_876421.1 CDS CpB0145 NC_005043.1 175449 178058 D heat shock protein; similar to heat shock protein ClpB - Synechococcus sp.; ClpB 175449..178058 Chlamydophila pneumoniae TW-183 1466828 NP_876422.1 CDS CpB0146 NC_005043.1 178299 179867 D similar to hypothetical protein CT114 - Chlamydia trachomatis; hypothetical protein 178299..179867 Chlamydophila pneumoniae TW-183 1466829 NP_876423.1 CDS CpB0147 NC_005043.1 180108 180593 D hypothetical protein 180108..180593 Chlamydophila pneumoniae TW-183 1466830 NP_876424.1 CDS CpB0148 NC_005043.1 180720 181169 D hypothetical protein 180720..181169 Chlamydophila pneumoniae TW-183 1466831 NP_876425.1 CDS CpB0149 NC_005043.1 181341 183200 D similar to protein kinase family; protein kinase 181341..183200 Chlamydophila pneumoniae TW-183 1466832 NP_876426.1 CDS ligA NC_005043.1 183210 185198 D this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 183210..185198 Chlamydophila pneumoniae TW-183 1466833 NP_876427.1 CDS CpB0151 NC_005043.1 185329 189942 D similar to hypothetical protein CT147 - Chlamydia trachomatis; hypothetical protein 185329..189942 Chlamydophila pneumoniae TW-183 1466834 NP_876428.1 CDS CpB0152 NC_005043.1 190117 191637 R similar to pentachlorophenol 4-monooxygenase - Flavobacterium sp.; pentachlorophenol 4-monooxygenase complement(190117..191637) Chlamydophila pneumoniae TW-183 1466835 NP_876429.1 CDS CpB0153 NC_005043.1 191810 192760 R similar to hypothetical protein CT149 - Chlamydia trachomatis; hypothetical protein complement(191810..192760) Chlamydophila pneumoniae TW-183 1466836 NP_876430.1 CDS leuS NC_005043.1 192928 195390 D leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 192928..195390 Chlamydophila pneumoniae TW-183 1466837 NP_876431.1 CDS CpB0155 NC_005043.1 195387 196700 D catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 195387..196700 Chlamydophila pneumoniae TW-183 1466838 NP_876432.1 CDS CpB0156 NC_005043.1 196980 197186 R hypothetical protein complement(196980..197186) Chlamydophila pneumoniae TW-183 1466839 NP_876433.1 CDS CpB0157 NC_005043.1 197262 197804 R similar to kdtA KDO-transferase - C. pneumoniae; kdtA KDO-transferase complement(197262..197804) Chlamydophila pneumoniae TW-183 1466840 NP_876434.1 CDS CpB0158 NC_005043.1 197791 198219 R hypothetical protein complement(197791..198219) Chlamydophila pneumoniae TW-183 1466841 NP_876435.1 CDS CpB0159 NC_005043.1 198387 198926 R similar to KDO-transferase - C.pneumoniae; KDO-transferase complement(198387..198926) Chlamydophila pneumoniae TW-183 1466842 NP_876436.1 CDS CpB0160 NC_005043.1 198960 199268 R hypothetical protein complement(198960..199268) Chlamydophila pneumoniae TW-183 1466843 NP_876437.1 CDS CpB0161 NC_005043.1 199564 201198 R catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; diphosphate--fructose-6-phosphate 1-phosphotransferase complement(199564..201198) Chlamydophila pneumoniae TW-183 1466844 NP_876438.1 CDS cinI NC_005043.1 201202 202029 R similar to cinnamoyl ester hydrolase - Butyrivibrio fibrisolvens; cinnamoyl ester hydrolase complement(201202..202029) Chlamydophila pneumoniae TW-183 1466845 NP_876439.1 CDS CpB0163 NC_005043.1 202207 203235 R hypothetical protein complement(202207..203235) Chlamydophila pneumoniae TW-183 1466846 NP_876440.1 CDS CpB0164 NC_005043.1 203433 203804 D similar to lamin 2 - Homo sapiens; hypothetical protein 203433..203804 Chlamydophila pneumoniae TW-183 1466847 NP_876441.1 CDS CpB0165 NC_005043.1 203851 204408 D hypothetical protein 203851..204408 Chlamydophila pneumoniae TW-183 1466848 NP_876442.1 CDS CpB0166 NC_005043.1 204405 204992 D hypothetical protein 204405..204992 Chlamydophila pneumoniae TW-183 1466849 NP_876443.1 CDS CpB0167 NC_005043.1 205037 205372 D hypothetical protein 205037..205372 Chlamydophila pneumoniae TW-183 1466850 NP_876444.1 CDS CpB0168 NC_005043.1 205381 205713 R similar to ribosomal protein YmL31 precursor, mitochondrial - Saccharomyces cerevisiae; hypothetical protein complement(205381..205713) Chlamydophila pneumoniae TW-183 1466851 NP_876445.1 CDS CpB0169 NC_005043.1 205821 206048 R hypothetical protein complement(205821..206048) Chlamydophila pneumoniae TW-183 1466852 NP_876446.1 CDS CpB0170 NC_005043.1 206114 206908 R hypothetical protein complement(206114..206908) Chlamydophila pneumoniae TW-183 1466853 NP_876447.1 CDS CpB0171 NC_005043.1 207058 207213 D hypothetical protein 207058..207213 Chlamydophila pneumoniae TW-183 1466854 NP_876448.1 CDS CpB0172 NC_005043.1 207429 208433 R hypothetical protein complement(207429..208433) Chlamydophila pneumoniae TW-183 1466855 NP_876449.1 CDS CpB0173 NC_005043.1 208553 209842 R glutamine-hydrolyzing; similar to GMP synthase (glutamine-hydrolyzing) - Escherichia coli; GMP synthase complement(208553..209842) Chlamydophila pneumoniae TW-183 1466856 NP_876450.1 CDS CpB0174 NC_005043.1 209844 210584 R similar to guaB gene for inosine 5-monophosphase dehydrogenase subunit - Escherichia coli ( pseudogene)'; guaB gene for inosine 5-monophosphase dehydrogenase subunit complement(209844..210584) Chlamydophila pneumoniae TW-183 1466857 NP_876451.1 CDS CpB0175 NC_005043.1 210645 210908 R similar to guaB gene for inosine 5-monophosphase dehydrogenase subunit - Bacillus subtilis ( pseudogene)'; guaB gene for inosine 5-monophosphase dehydrogenase subunit complement(210645..210908) Chlamydophila pneumoniae TW-183 1466858 NP_876452.1 CDS CpB0176 NC_005043.1 211119 211394 R hypothetical protein complement(211119..211394) Chlamydophila pneumoniae TW-183 1466859 NP_876453.1 CDS CpB0177 NC_005043.1 211640 212134 D hypothetical protein 211640..212134 Chlamydophila pneumoniae TW-183 1466860 NP_876454.1 CDS CpB0178 NC_005043.1 212305 212685 D hypothetical protein 212305..212685 Chlamydophila pneumoniae TW-183 1466861 NP_876455.1 CDS CpB0179 NC_005043.1 212693 213928 D similar to hypothetical protein CT153 - Chlamydia trachomatis; hypothetical protein 212693..213928 Chlamydophila pneumoniae TW-183 1466862 NP_876456.1 CDS CpB0180 NC_005043.1 214012 214866 R hypothetical protein complement(214012..214866) Chlamydophila pneumoniae TW-183 1466863 NP_876457.1 CDS CpB0181 NC_005043.1 215193 215459 R hypothetical protein complement(215193..215459) Chlamydophila pneumoniae TW-183 1466864 NP_876458.1 CDS CpB0182 NC_005043.1 215460 215810 R hypothetical protein complement(215460..215810) Chlamydophila pneumoniae TW-183 1466865 NP_876459.1 CDS CpB0183 NC_005043.1 215759 216313 R hypothetical protein complement(215759..216313) Chlamydophila pneumoniae TW-183 1466866 NP_876460.1 CDS CpB0184 NC_005043.1 216181 216582 R hypothetical protein complement(216181..216582) Chlamydophila pneumoniae TW-183 1466867 NP_876461.1 CDS CpB0185 NC_005043.1 216738 218102 R an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit complement(216738..218102) Chlamydophila pneumoniae TW-183 1466868 NP_876462.1 CDS CpB0186 NC_005043.1 218099 218602 R composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit complement(218099..218602) Chlamydophila pneumoniae TW-183 1466869 NP_876463.1 CDS CpB0187 NC_005043.1 218625 219182 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(218625..219182) Chlamydophila pneumoniae TW-183 1466870 NP_876464.1 CDS CpB0188 NC_005043.1 219169 219858 R catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase complement(219169..219858) Chlamydophila pneumoniae TW-183 1466871 NP_876465.1 CDS CpB0189 NC_005043.1 220306 221478 D similar to inclusion membrane protein A - Chlamydia psittaci; inclusion membrane protein A 220306..221478 Chlamydophila pneumoniae TW-183 1466872 NP_876466.1 CDS CpB0190 NC_005043.1 221655 222455 D similar to hypothetical protein 2 - Chlamydia psittaci; hypothetical protein 221655..222455 Chlamydophila pneumoniae TW-183 1466873 NP_876467.1 CDS CpB0191 NC_005043.1 222518 223810 D similar to hypothetical protein CT132 - Chlamydia trachomatis; hypothetical protein 222518..223810 Chlamydophila pneumoniae TW-183 1466874 NP_876468.1 CDS CpB0192 NC_005043.1 223807 227235 D similar to probable transmembrane protein CT131 - Chlamydia trachomatis; hypothetical protein 223807..227235 Chlamydophila pneumoniae TW-183 1466875 NP_876469.1 CDS CpB0193 NC_005043.1 227326 228684 D similar to myosin heavy chain, skeletal muscle - Oryctolagus cuniculus; hypothetical protein 227326..228684 Chlamydophila pneumoniae TW-183 1466876 NP_876470.1 CDS CpB0194 NC_005043.1 228718 229398 R similar to amino acid transport ATP-binding proteins; amino acid transport ATP-binding protein complement(228718..229398) Chlamydophila pneumoniae TW-183 1466877 NP_876471.1 CDS CpB0195 NC_005043.1 229388 230041 R similar to ABC amino acid transporter permease family; ABC amino acid transporter permease complement(229388..230041) Chlamydophila pneumoniae TW-183 1466878 NP_876472.1 CDS CpB0196 NC_005043.1 230090 230533 R similar to arginine repressor protein - Escherichia coli; arginine repressor ArgR complement(230090..230533) Chlamydophila pneumoniae TW-183 1466879 NP_876473.1 CDS CpB0197 NC_005043.1 230617 231651 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 230617..231651 Chlamydophila pneumoniae TW-183 1466880 NP_876474.1 CDS CpB0198 NC_005043.1 231597 233195 D similar to oligopeptide ABC transport system substrate-binding protein oppA precursor - Bacillus subtilis; oligopeptide ABC transport system substrate-binding protein oppA precursor 231597..233195 Chlamydophila pneumoniae TW-183 1466881 NP_876475.1 CDS CpB0199 NC_005043.1 233346 234929 D similar to oligopeptide ABC transport system substrate-binding protein oppA precursor - Bacillus subtilis; oligopeptide ABC transport system substrate-binding protein oppA precursor 233346..234929 Chlamydophila pneumoniae TW-183 1466882 NP_876476.1 CDS CpB0200 NC_005043.1 234985 236292 D similar to oligopeptide ABC transport system substrate-binding protein oppA precursor - Bacillus subtilis; oligopeptide ABC transport system substrate-binding protein oppA precursor 234985..236292 Chlamydophila pneumoniae TW-183 1466883 NP_876477.1 CDS CpB0201 NC_005043.1 236570 238156 D similar to Bacillus subtilis dipeptide ABC transporter, dipeptide-binding protein; dipeptide ABC transporter 236570..238156 Chlamydophila pneumoniae TW-183 1466884 NP_876478.1 CDS oppB NC_005043.1 238449 239393 D similar to oligopeptide transport system permease protein oppB - Bacillus subtilis; oligopeptide transport system permease protein 238449..239393 Chlamydophila pneumoniae TW-183 1466885 NP_876479.1 CDS oppC NC_005043.1 239424 240278 D similar to oligopeptide ABC transporter (permease) oppC - Bacillus subtilis; oligopeptide ABC transporter (permease) 239424..240278 Chlamydophila pneumoniae TW-183 1466886 NP_876480.1 CDS oppD NC_005043.1 240271 241125 D similar to oligopeptide transport ATP-binding protein oppD - Bacillus subtilis; oligopeptide transport ATP-binding protein 240271..241125 Chlamydophila pneumoniae TW-183 1466887 NP_876481.1 CDS oppF NC_005043.1 241122 241910 D similar to oligopeptide transport protein oppF - Lactococcus lactis; oligopeptide transport protein 241122..241910 Chlamydophila pneumoniae TW-183 1466888 NP_876482.1 CDS CpB0206 NC_005043.1 242017 242199 D hypothetical protein 242017..242199 Chlamydophila pneumoniae TW-183 1466889 NP_876483.1 CDS CpB0207 NC_005043.1 242415 243212 D hypothetical protein 242415..243212 Chlamydophila pneumoniae TW-183 1466890 NP_876484.1 CDS CpB0208 NC_005043.1 243224 243412 D hypothetical protein 243224..243412 Chlamydophila pneumoniae TW-183 1466891 NP_876485.1 CDS CpB0209 NC_005043.1 243540 243737 D hypothetical protein 243540..243737 Chlamydophila pneumoniae TW-183 1466892 NP_876486.1 CDS CpB0210 NC_005043.1 243816 244571 D similar to hypothetical protein CT203 - Chlamydia trachomatis; hypothetical protein 243816..244571 Chlamydophila pneumoniae TW-183 1466893 NP_876487.1 CDS CpB0211 NC_005043.1 244615 246027 D similar to 2-oxoglutarate/malate translocator precursor - Spinacia oleracea; 2-oxoglutarate/malate translocator precursor 244615..246027 Chlamydophila pneumoniae TW-183 1466894 NP_876488.1 CDS CpB0212 NC_005043.1 246360 248012 D catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; diphosphate--fructose-6-phosphate 1-phosphotransferase 246360..248012 Chlamydophila pneumoniae TW-183 1466895 NP_876489.1 CDS CpB0213 NC_005043.1 248437 248682 D hypothetical protein 248437..248682 Chlamydophila pneumoniae TW-183 1466896 NP_876490.1 CDS CpB0214 NC_005043.1 248844 249791 R hypothetical protein complement(248844..249791) Chlamydophila pneumoniae TW-183 1466897 NP_876491.1 CDS CpB0215 NC_005043.1 249867 250163 R hypothetical protein complement(249867..250163) Chlamydophila pneumoniae TW-183 1466898 NP_876492.1 CDS CpB0216 NC_005043.1 250292 251485 R hypothetical protein complement(250292..251485) Chlamydophila pneumoniae TW-183 1466899 NP_876493.1 CDS CpB0217 NC_005043.1 251521 251679 R hypothetical protein complement(251521..251679) Chlamydophila pneumoniae TW-183 1466900 NP_876494.1 CDS CpB0218 NC_005043.1 251857 253071 R similar to transport protein USO1 - Saccharomyces cerevisiae; hypothetical protein complement(251857..253071) Chlamydophila pneumoniae TW-183 1466901 NP_876495.1 CDS CpB0219 NC_005043.1 253170 254429 R similar to mammalian coiled coil synaptonemal complex protein family; hypothetical protein complement(253170..254429) Chlamydophila pneumoniae TW-183 1466902 NP_876496.1 CDS CpB0220 NC_005043.1 254585 255022 R hypothetical protein complement(254585..255022) Chlamydophila pneumoniae TW-183 1466903 NP_876497.1 CDS CpB0221 NC_005043.1 255310 255996 D hypothetical protein 255310..255996 Chlamydophila pneumoniae TW-183 1466904 NP_876498.1 CDS CpB0222 NC_005043.1 255993 256562 R hypothetical protein complement(255993..256562) Chlamydophila pneumoniae TW-183 1466905 NP_876499.1 CDS CpB0223 NC_005043.1 256771 257889 D Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4, 5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7- deazaguanosine); queuine tRNA-ribosyltransferase 256771..257889 Chlamydophila pneumoniae TW-183 1466906 NP_876500.1 CDS CpB0224 NC_005043.1 258110 258655 D hypothetical protein 258110..258655 Chlamydophila pneumoniae TW-183 1466907 NP_876501.1 CDS CpB0225 NC_005043.1 259071 259481 D hypothetical protein 259071..259481 Chlamydophila pneumoniae TW-183 1466908 NP_876502.1 CDS CpB0226 NC_005043.1 259646 259837 R hypothetical protein complement(259646..259837) Chlamydophila pneumoniae TW-183 1466909 NP_876503.1 CDS CpB0227 NC_005043.1 259918 260259 D similar to 47.6K protein - Chlamydia psittaci phage Chp1; hypothetical protein 259918..260259 Chlamydophila pneumoniae TW-183 1466910 NP_876504.1 CDS CpB0228 NC_005043.1 260370 260750 D hypothetical protein 260370..260750 Chlamydophila pneumoniae TW-183 1466911 NP_876505.1 CDS CpB0229 NC_005043.1 260849 261091 D similar to major adhesion protein MgPa gene - Mycoplasma genitalium; hypothetical protein 260849..261091 Chlamydophila pneumoniae TW-183 1466912 NP_876506.1 CDS CpB0230 NC_005043.1 261070 261240 D hypothetical protein 261070..261240 Chlamydophila pneumoniae TW-183 1466913 NP_876507.1 CDS CpB0231 NC_005043.1 261287 261958 D hypothetical protein 261287..261958 Chlamydophila pneumoniae TW-183 1466914 NP_876508.1 CDS CpB0232 NC_005043.1 261980 262384 D hypothetical protein 261980..262384 Chlamydophila pneumoniae TW-183 1466915 NP_876509.1 CDS CpB0233 NC_005043.1 262420 262833 R similar to probable protein-disulfide oxidoreductase - Chlamydia trachomatis; disulfide oxidoreductase complement(262420..262833) Chlamydophila pneumoniae TW-183 1466916 NP_876510.1 CDS CpB0234 NC_005043.1 262823 263524 R similar to probable disulfide bond chaperone - Chlamydia trachomatis; disulfide bond chaperone complement(262823..263524) Chlamydophila pneumoniae TW-183 1466917 NP_876511.1 CDS CpB0235 NC_005043.1 263598 264977 D similar to hypothetical protein CT178 - Chlamydia trachomatis; hypothetical protein 263598..264977 Chlamydophila pneumoniae TW-183 1466918 NP_876512.1 CDS CpB0236 NC_005043.1 264987 265667 R similar to hypothetical protein CT179 - Chlamydia trachomatis; hypothetical protein complement(264987..265667) Chlamydophila pneumoniae TW-183 1466919 NP_876513.1 CDS CpB0237 NC_005043.1 265664 266371 R similar to ATP-binding cassette-transport protein - Mycobacterium smegmatis; ATP-binding cassette-transport protein complement(265664..266371) Chlamydophila pneumoniae TW-183 1466920 NP_876514.1 CDS CpB0238 NC_005043.1 266643 267536 R similar to pfs protein - Haemophilus influenzae; pfs protein complement(266643..267536) Chlamydophila pneumoniae TW-183 1466921 NP_876515.1 CDS CpB0239 NC_005043.1 267659 267832 R hypothetical protein complement(267659..267832) Chlamydophila pneumoniae TW-183 1466922 NP_876516.1 CDS CpB0240 NC_005043.1 267959 268654 R similar to hypothetical protein CT181 - Chlamydia trachomatis; hypothetical protein complement(267959..268654) Chlamydophila pneumoniae TW-183 1466923 NP_876517.1 CDS CpB0241 NC_005043.1 268830 269594 D CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 268830..269594 Chlamydophila pneumoniae TW-183 1466924 NP_876518.1 CDS pyrG NC_005043.1 269570 271183 D CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 269570..271183 Chlamydophila pneumoniae TW-183 1466925 NP_876519.1 CDS CpB0243 NC_005043.1 271176 271631 D similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 271176..271631 Chlamydophila pneumoniae TW-183 1466926 NP_876520.1 CDS CpB0244 NC_005043.1 271717 273255 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 271717..273255 Chlamydophila pneumoniae TW-183 1466927 NP_876521.1 CDS CpB0245 NC_005043.1 273289 274089 D catalyzes the formation of 6-phospho-D-gluconate from 6-phospho-D-glucono-1,5-lactone; 6-phosphogluconolactonase 273289..274089 Chlamydophila pneumoniae TW-183 1466928 NP_876522.1 CDS CpB0246 NC_005043.1 274109 275275 R hypothetical protein complement(274109..275275) Chlamydophila pneumoniae TW-183 1466929 NP_876523.1 CDS CpB0247 NC_005043.1 275614 276780 R hypothetical protein complement(275614..276780) Chlamydophila pneumoniae TW-183 1466930 NP_876524.1 CDS CpB0248 NC_005043.1 276898 277332 R hypothetical protein complement(276898..277332) Chlamydophila pneumoniae TW-183 1466931 NP_876525.1 CDS CpB0249 NC_005043.1 277544 277969 R hypothetical protein complement(277544..277969) Chlamydophila pneumoniae TW-183 1466932 NP_876526.1 CDS CpB0250 NC_005043.1 278100 278339 D hypothetical protein 278100..278339 Chlamydophila pneumoniae TW-183 1466933 NP_876527.1 CDS adk NC_005043.1 278332 278973 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 278332..278973 Chlamydophila pneumoniae TW-183 1466934 NP_876528.1 CDS CpB0252 NC_005043.1 279059 279916 D similar to Listeria seeligeri p60 precursor; invasion-associated protein; p60 precursor 279059..279916 Chlamydophila pneumoniae TW-183 1466935 NP_876529.1 CDS rpsI NC_005043.1 279962 280366 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(279962..280366) Chlamydophila pneumoniae TW-183 1466936 NP_876530.1 CDS rplM NC_005043.1 280380 280829 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(280380..280829) Chlamydophila pneumoniae TW-183 1466937 NP_876531.1 CDS CpB0255 NC_005043.1 281061 281741 R similar to ABC transporter ATPase family; ABC transporter ATPase complement(281061..281741) Chlamydophila pneumoniae TW-183 1466938 NP_876532.1 CDS CpB0256 NC_005043.1 281744 283255 R similar to hypothetical protein CT151 - Chlamydia trachomatis; hypothetical protein complement(281744..283255) Chlamydophila pneumoniae TW-183 1466939 NP_876533.1 CDS rpmG NC_005043.1 283313 283471 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 complement(283313..283471) Chlamydophila pneumoniae TW-183 1466940 NP_876534.1 CDS CpB0258 NC_005043.1 283474 284976 D similar to hypothetical protein aq_849 - Aquifex aeolicus; hypothetical protein 283474..284976 Chlamydophila pneumoniae TW-183 1466941 NP_876535.1 CDS CpB0259 NC_005043.1 284987 285499 R similar to hypothetical protein CT144 - Chlamydia trachomatis; hypothetical protein complement(284987..285499) Chlamydophila pneumoniae TW-183 1466942 NP_876536.1 CDS CpB0260 NC_005043.1 285361 285870 R similar to hypothetical protein CT144 - Chlamydia trachomatis; hypothetical protein complement(285361..285870) Chlamydophila pneumoniae TW-183 1466943 NP_876537.1 CDS CpB0261 NC_005043.1 285870 286676 R similar to hypothetical protein CT143 - Chlamydia trachomatis; hypothetical protein complement(285870..286676) Chlamydophila pneumoniae TW-183 1466944 NP_876538.1 CDS CpB0262 NC_005043.1 286740 287579 R similar to hypothetical protein CT142 - Chlamydia trachomatis; hypothetical protein complement(286740..287579) Chlamydophila pneumoniae TW-183 1466945 NP_876539.1 CDS CpB0263 NC_005043.1 287809 288678 R similar to hypothetical protein CT144 - Chlamydia trachomatis; hypothetical protein complement(287809..288678) Chlamydophila pneumoniae TW-183 1466946 NP_876540.1 CDS CpB0264 NC_005043.1 288678 289541 R similar to hypothetical protein CT143 - Chlamydia trachomatis; hypothetical protein complement(288678..289541) Chlamydophila pneumoniae TW-183 1466947 NP_876541.1 CDS CpB0265 NC_005043.1 289852 290400 R similar to hypothetical protein CT142 - Chlamydia trachomatis; hypothetical protein complement(289852..290400) Chlamydophila pneumoniae TW-183 1466948 NP_876542.1 CDS CpB0266 NC_005043.1 290547 290711 R similar to pEARLI 4 - Arabidopsis thaliana; pEARLI 4 complement(290547..290711) Chlamydophila pneumoniae TW-183 1466949 NP_876543.1 CDS CpB0267 NC_005043.1 290959 291474 R similar to YecA - Escherichia coli; hypothetical protein complement(290959..291474) Chlamydophila pneumoniae TW-183 1466950 NP_876544.1 CDS CpB0268 NC_005043.1 291716 292450 D similar to ydaO protein - Escherichia coli; hypothetical protein 291716..292450 Chlamydophila pneumoniae TW-183 1466951 NP_876545.1 CDS surE NC_005043.1 292505 293350 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 292505..293350 Chlamydophila pneumoniae TW-183 1466952 NP_876546.1 CDS CpB0270 NC_005043.1 293663 294553 D similar to hypothetical protein yqfU - Chlamydia trachomatis; hypothetical protein 293663..294553 Chlamydophila pneumoniae TW-183 1466953 NP_876547.1 CDS CpB0271 NC_005043.1 294566 295144 R similar to phenylacrylic acid decarboxylase - Saccharomyces cerevisiae; aromatic acid decarboxylase complement(294566..295144) Chlamydophila pneumoniae TW-183 1466954 NP_876548.1 CDS ubiA NC_005043.1 295141 296034 R UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; prenyltransferase complement(295141..296034) Chlamydophila pneumoniae TW-183 1466955 NP_876549.1 CDS CpB0273 NC_005043.1 296598 297293 D similar to HB6 protein, Chlamydia pneumoniae; HB6 protein 296598..297293 Chlamydophila pneumoniae TW-183 1466956 NP_876550.1 CDS CpB0274 NC_005043.1 297545 298327 D hypothetical protein 297545..298327 Chlamydophila pneumoniae TW-183 1466957 NP_876551.1 CDS CpB0275 NC_005043.1 298391 298735 D hypothetical protein 298391..298735 Chlamydophila pneumoniae TW-183 1466958 NP_876552.1 CDS CpB0276 NC_005043.1 298887 299864 R similar to membrane dipeptidase precursor - rat; membrane dipeptidase precursor complement(298887..299864) Chlamydophila pneumoniae TW-183 1466959 NP_876553.1 CDS CpB0277 NC_005043.1 299879 300739 R similar to SUA5 protein - Saccharomyces cerevisiae; SUA5 protein complement(299879..300739) Chlamydophila pneumoniae TW-183 1466960 NP_876554.1 CDS CpB0279 NC_005043.1 301048 301779 D similar to esterase - Spirulina platensis; esterase 301048..301779 Chlamydophila pneumoniae TW-183 1466961 NP_876555.1 CDS dnaX NC_005043.1 301751 302506 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' complement(301751..302506) Chlamydophila pneumoniae TW-183 1466962 NP_876556.1 CDS tmk NC_005043.1 302638 303258 R catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase complement(302638..303258) Chlamydophila pneumoniae TW-183 1466963 NP_876557.1 CDS CpB0281 NC_005043.1 303263 305767 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A complement(303263..305767) Chlamydophila pneumoniae TW-183 1466964 NP_876558.1 CDS gyrB NC_005043.1 305783 308200 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B complement(305783..308200) Chlamydophila pneumoniae TW-183 1466965 NP_876559.1 CDS CpB0283 NC_005043.1 308204 308551 R similar to hypothetical protein CT191 - Chlamydia trachomatis; hypothetical protein complement(308204..308551) Chlamydophila pneumoniae TW-183 1466966 NP_876560.1 CDS CpB0284 NC_005043.1 308618 308818 D hypothetical protein 308618..308818 Chlamydophila pneumoniae TW-183 1466967 NP_876561.1 CDS CpB0285 NC_005043.1 308815 309324 R hypothetical protein complement(308815..309324) Chlamydophila pneumoniae TW-183 1466968 NP_876562.1 CDS CpB0286 NC_005043.1 309471 310289 R similar to gene encoding a 29 kDa immunogenic protein - Legionella pneumophila; gene encoding a 29 kDa immunogenic protein complement(309471..310289) Chlamydophila pneumoniae TW-183 1466969 NP_876563.1 CDS CpB0287 NC_005043.1 310286 310951 R similar to ABC transporter family; ABC transporter complement(310286..310951) Chlamydophila pneumoniae TW-183 1466970 NP_876564.1 CDS CpB0288 NC_005043.1 310961 311986 R similar to amino-acid ABC transporter protein family; amino-acid ABC transporter protein complement(310961..311986) Chlamydophila pneumoniae TW-183 1466971 NP_876565.1 CDS CpB0289 NC_005043.1 312471 313520 D catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; fructose-bisphosphate aldolase 312471..313520 Chlamydophila pneumoniae TW-183 1466972 NP_876566.1 CDS CpB0290 NC_005043.1 313540 314946 D similar to extreme acid resistance protein xasA - Escherichia coli; extreme acid resistance protein xasA 313540..314946 Chlamydophila pneumoniae TW-183 1466973 NP_876567.1 CDS CpB0291 NC_005043.1 314943 315911 R hypothetical protein complement(314943..315911) Chlamydophila pneumoniae TW-183 1466974 NP_876568.1 CDS CpB0292 NC_005043.1 315962 316384 R hypothetical protein complement(315962..316384) Chlamydophila pneumoniae TW-183 1466975 NP_876569.1 CDS CpB0293 NC_005043.1 316462 318009 R hypothetical protein complement(316462..318009) Chlamydophila pneumoniae TW-183 1466976 NP_876570.1 CDS mgtE NC_005043.1 318061 319473 R similar to mgtE protein - Bacillus firmus; MgtE complement(318061..319473) Chlamydophila pneumoniae TW-183 1466977 NP_876571.1 CDS CpB0295 NC_005043.1 319500 321635 R similar to hypothetical protein CT195 - Chlamydia trachomatis; hypothetical protein complement(319500..321635) Chlamydophila pneumoniae TW-183 1466978 NP_876572.1 CDS CpB0296 NC_005043.1 321982 323130 R similar to hypothetical protein CT195 - Chlamydia trachomati; hypothetical protein complement(321982..323130) Chlamydophila pneumoniae TW-183 1466979 NP_876573.1 CDS CpB0297 NC_005043.1 323226 324413 D similar to amino acid (glutamate) transporter family; amino acid (glutamate) transporter 323226..324413 Chlamydophila pneumoniae TW-183 1466980 NP_876574.1 CDS CpB0299 NC_005043.1 324456 325940 D AaaT; similar to sodium-dependent amino acid transporter (AaaT) - Chlamydia psittaci; sodium-dependent amino acid transporter 324456..325940 Chlamydophila pneumoniae TW-183 1466981 NP_876575.1 CDS CpB0298 NC_005043.1 325925 326080 R hypothetical protein complement(325925..326080) Chlamydophila pneumoniae TW-183 1466982 NP_876576.1 CDS CpB0300 NC_005043.1 326081 326611 D similar to inclusion membrane protein B - Chlamydia psittaci; inclusion membrane protein B 326081..326611 Chlamydophila pneumoniae TW-183 1466983 NP_876577.1 CDS CpB0301 NC_005043.1 326642 327253 D similar to inclusion membrane protein C - Chlamydia psittaci; inclusion membrane protein C 326642..327253 Chlamydophila pneumoniae TW-183 1466984 NP_876578.1 CDS CpB0302 NC_005043.1 327363 330140 D similar to amino acid transporter - Chlamydia psittaci; hypothetical protein 327363..330140 Chlamydophila pneumoniae TW-183 1466985 NP_876579.1 CDS CpB0303 NC_005043.1 330506 330919 D similar to cAMP-dependent protein kinase type I regulatory subunit - Rattus norvegicus; cAMP-dependent protein kinase type I regulatory subunit 330506..330919 Chlamydophila pneumoniae TW-183 1466986 NP_876580.1 CDS acpP NC_005043.1 331038 331277 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(331038..331277) Chlamydophila pneumoniae TW-183 1466987 NP_876581.1 CDS fabG NC_005043.1 331433 332179 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(331433..332179) Chlamydophila pneumoniae TW-183 1466988 NP_876582.1 CDS fabD NC_005043.1 332185 333111 R similar to malonyl CoA-acyl carrier protein transacylase fabD - Bacillus subtilis; ACP S-malonyltransferase complement(332185..333111) Chlamydophila pneumoniae TW-183 1466989 NP_876583.1 CDS yjaX NC_005043.1 333128 334135 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase complement(333128..334135) Chlamydophila pneumoniae TW-183 1466990 NP_876584.1 CDS recR NC_005043.1 334230 334832 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 334230..334832 Chlamydophila pneumoniae TW-183 1466991 NP_876585.1 CDS CpB0309 NC_005043.1 335191 337569 D similar to probable omp85 analog - Chlamydia trachomatis; omp85 analog 335191..337569 Chlamydophila pneumoniae TW-183 1466992 NP_876586.1 CDS CpB0310 NC_005043.1 337664 338179 D similar to ompH-like outer membrane protein - Chlamydia trachomatis; OmpH-like outer membrane protein 337664..338179 Chlamydophila pneumoniae TW-183 1466993 NP_876587.1 CDS lpxD NC_005043.1 338201 339283 D adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 338201..339283 Chlamydophila pneumoniae TW-183 1466994 NP_876588.1 CDS CpB0312 NC_005043.1 339332 340372 R similar to hypothetical protein CT244 - Chlamydia trachomatis; hypothetical protein complement(339332..340372) Chlamydophila pneumoniae TW-183 1466995 NP_876589.1 CDS CpB0313 NC_005043.1 340547 341575 D similar to pyruvate dehydrogenase complex E1 alpha subunit - Thiobacillus ferrooxidans; pyruvate dehydrogenase complex E1 alpha subunit 340547..341575 Chlamydophila pneumoniae TW-183 1466996 NP_876590.1 CDS CpB0314 NC_005043.1 341568 342554 D similar to pyruvate dehydrogenase E1 beta subunit - Zea mays; pyruvate dehydrogenase E1 beta subunit 341568..342554 Chlamydophila pneumoniae TW-183 1466997 NP_876591.1 CDS CpB0315 NC_005043.1 342559 343848 D Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA; branched-chain alpha-keto acid dehydrogenase subunit E2 342559..343848 Chlamydophila pneumoniae TW-183 1466998 NP_876592.1 CDS CpB0316 NC_005043.1 343926 346400 R similar to glycogen phosphorylase family; glycogen phosphorylase complement(343926..346400) Chlamydophila pneumoniae TW-183 1466999 NP_876593.1 CDS CpB0318 NC_005043.1 346648 347013 D similar to hypothetical protein orf175 - Pseudomonas stutzeri; hypothetical protein 346648..347013 Chlamydophila pneumoniae TW-183 1467000 NP_876594.1 CDS dnaA NC_005043.1 347006 348388 R binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosome replication initiator DnaA complement(347006..348388) Chlamydophila pneumoniae TW-183 1467001 NP_876595.1 CDS CpB0319 NC_005043.1 348460 350832 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC complement(348460..350832) Chlamydophila pneumoniae TW-183 1467002 NP_876596.1 CDS CpB0320 NC_005043.1 350986 351852 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(350986..351852) Chlamydophila pneumoniae TW-183 1467003 NP_876597.1 CDS CpB0321 NC_005043.1 351938 352393 D similar to hypothetical protein CT101 - Chlamydia trachomatis; hypothetical protein 351938..352393 Chlamydophila pneumoniae TW-183 1467004 NP_876598.1 CDS acpS NC_005043.1 352404 352772 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 352404..352772 Chlamydophila pneumoniae TW-183 1467005 NP_876599.1 CDS CpB0322 NC_005043.1 352764 353699 R similar to thioredoxin reductase - Neurospora crassa; thioredoxin reductase complement(352764..353699) Chlamydophila pneumoniae TW-183 1467006 NP_876600.1 CDS CpB0324 NC_005043.1 354164 354334 D hypothetical protein 354164..354334 Chlamydophila pneumoniae TW-183 1467007 NP_876601.1 CDS rpsA NC_005043.1 354391 356133 D in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 354391..356133 Chlamydophila pneumoniae TW-183 1467008 NP_876602.1 CDS nusA NC_005043.1 356234 357538 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 356234..357538 Chlamydophila pneumoniae TW-183 1467009 NP_876603.1 CDS infB NC_005043.1 357477 360167 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 357477..360167 Chlamydophila pneumoniae TW-183 1467010 NP_876604.1 CDS rbfA NC_005043.1 360181 360543 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 360181..360543 Chlamydophila pneumoniae TW-183 1467011 NP_876605.1 CDS truB NC_005043.1 360589 361296 D catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 360589..361296 Chlamydophila pneumoniae TW-183 1467012 NP_876606.1 CDS ribC NC_005043.1 361280 362200 D catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 361280..362200 Chlamydophila pneumoniae TW-183 1467013 NP_876607.1 CDS CpB0330 NC_005043.1 362178 363272 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(362178..363272) Chlamydophila pneumoniae TW-183 1467014 NP_876608.1 CDS CpB0332 NC_005043.1 363663 364745 D type III secretion protein; similar to YopU type III secretion protein - Chlamydia psittaci; type III secretion system protein 363663..364745 Chlamydophila pneumoniae TW-183 1467015 NP_876609.1 CDS lcrD NC_005043.1 364745 366877 D similar to low calcium response D lcrD protein - Yersinia enterocolitica; low calcium response D 364745..366877 Chlamydophila pneumoniae TW-183 1467016 NP_876610.1 CDS copN NC_005043.1 366906 368105 D similar to CopN - Chlamydia psittaci; CopN 366906..368105 Chlamydophila pneumoniae TW-183 1467017 NP_876611.1 CDS scc1 NC_005043.1 368122 368565 D chaperone of type III secretory pathway; similar to chaperone of type III secretory pathway scc1 - Chlamydia psittaci; Scc1 368122..368565 Chlamydophila pneumoniae TW-183 1467018 NP_876612.1 CDS CpB0336 NC_005043.1 368562 370142 D amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 368562..370142 Chlamydophila pneumoniae TW-183 1467019 NP_876613.1 CDS rpmB NC_005043.1 370359 370628 D required for 70S ribosome assembly; 50S ribosomal protein L28 370359..370628 Chlamydophila pneumoniae TW-183 1467020 NP_876614.1 CDS CpB0338 NC_005043.1 370655 372409 D similar to hypothetical protein CT085 - Chlamydia trachomatis; hypothetical protein 370655..372409 Chlamydophila pneumoniae TW-183 1467021 NP_876615.1 CDS CpB0339 NC_005043.1 372502 373563 D leader (33) peptide; similar to probable phopholipase D, leader (33) peptide - Chlamydia trachomatis; phopholipase D 372502..373563 Chlamydophila pneumoniae TW-183 1467022 NP_876616.1 CDS CpB0340 NC_005043.1 373613 374089 R similar to hypothetical protein CT083 - Chlamydia trachomatis; hypothetical protein complement(373613..374089) Chlamydophila pneumoniae TW-183 1467023 NP_876617.1 CDS CpB0341 NC_005043.1 374112 375851 R similar to hypothetical protein CT082 - Chlamydia trachomatis; hypothetical protein complement(374112..375851) Chlamydophila pneumoniae TW-183 1467024 NP_876618.1 CDS ltuB NC_005043.1 376211 376504 R similar to LtuB - Chlamydia trachomatis; LtuB complement(376211..376504) Chlamydophila pneumoniae TW-183 1467025 NP_876619.1 CDS CpB0343 NC_005043.1 376725 377240 D similar to hypothetical protein CT079 - Chlamydia trachomatis; hypothetical protein 376725..377240 Chlamydophila pneumoniae TW-183 1467026 NP_876620.1 CDS CpB0344 NC_005043.1 377231 378091 D catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 377231..378091 Chlamydophila pneumoniae TW-183 1467027 NP_876621.1 CDS apbE NC_005043.1 378064 379008 D similar to thiamine biosynthesis lipoprotein precursor - Salmonella typhimurium; thiamine biosynthesis lipoprotein precursor 378064..379008 Chlamydophila pneumoniae TW-183 1467028 NP_876622.1 CDS smpB NC_005043.1 378986 379483 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(378986..379483) Chlamydophila pneumoniae TW-183 1467029 NP_876623.1 CDS CpB0347 NC_005043.1 379692 380792 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 379692..380792 Chlamydophila pneumoniae TW-183 1467030 NP_876624.1 CDS CpB0351 NC_005043.1 382036 383013 D similar to hypothetical protein CT073 - Chlamydia trachomatis; hypothetical protein 382036..383013 Chlamydophila pneumoniae TW-183 1467031 NP_876625.1 CDS CpB0350 NC_005043.1 382970 384835 R similar to probable metalloproteinase - Chlamydia trachomatis; metalloproteinase complement(382970..384835) Chlamydophila pneumoniae TW-183 1467032 NP_876626.1 CDS CpB0352 NC_005043.1 384848 385987 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(384848..385987) Chlamydophila pneumoniae TW-183 1467033 NP_876627.1 CDS CpB0353 NC_005043.1 386116 387090 R similar to probable integral membrane protein - Chlamydia trachomatis; integral membrane protein complement(386116..387090) Chlamydophila pneumoniae TW-183 1467034 NP_876628.1 CDS CpB0354 NC_005043.1 387090 388445 R similar to probable integral membrane protein - Chlamydia trachomatis; integral membrane protein complement(387090..388445) Chlamydophila pneumoniae TW-183 1467035 NP_876629.1 CDS CpB0355 NC_005043.1 388439 389218 R similar to ABC transporter family; ABC transporter complement(388439..389218) Chlamydophila pneumoniae TW-183 1467036 NP_876630.1 CDS CpB0356 NC_005043.1 389202 390173 R similar to periplasmic substrate binding protein TroA - Chlamydia trachomatis; periplasmic substrate binding protein TroA complement(389202..390173) Chlamydophila pneumoniae TW-183 1467037 NP_876631.1 CDS CpB0357 NC_005043.1 390301 390504 D hypothetical protein 390301..390504 Chlamydophila pneumoniae TW-183 1467038 NP_876632.1 CDS CpB0358 NC_005043.1 390681 391187 D similar to hypothetical protein CT066 - Chlamydia trachomatis; hypothetical protein 390681..391187 Chlamydophila pneumoniae TW-183 1467039 NP_876633.1 CDS CpB0359 NC_005043.1 391388 392935 D similar to ATP/ADP-transporter - Solanum tuberosum; ATP/ADP-transporter 391388..392935 Chlamydophila pneumoniae TW-183 1467040 NP_876634.1 CDS CpB0360 NC_005043.1 393053 394333 D hypothetical protein 393053..394333 Chlamydophila pneumoniae TW-183 1467041 NP_876635.1 CDS CpB0361 NC_005043.1 394393 394638 D hypothetical protein 394393..394638 Chlamydophila pneumoniae TW-183 1467042 NP_876636.1 CDS CpB0362 NC_005043.1 394667 396010 D hypothetical protein 394667..396010 Chlamydophila pneumoniae TW-183 1467043 NP_876637.1 CDS CpB0363 NC_005043.1 396088 397389 R hypothetical protein complement(396088..397389) Chlamydophila pneumoniae TW-183 1467044 NP_876638.1 CDS CpB0364 NC_005043.1 397606 397959 R hypothetical protein complement(397606..397959) Chlamydophila pneumoniae TW-183 1467045 NP_876639.1 CDS CpB0365 NC_005043.1 397966 398817 R hypothetical protein complement(397966..398817) Chlamydophila pneumoniae TW-183 1467046 NP_876640.1 CDS CpB0366 NC_005043.1 399075 399251 R hypothetical protein complement(399075..399251) Chlamydophila pneumoniae TW-183 1467047 NP_876641.1 CDS CpB0367 NC_005043.1 399327 399497 D hypothetical protein 399327..399497 Chlamydophila pneumoniae TW-183 1467048 NP_876642.1 CDS CpB0368 NC_005043.1 399512 401320 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 399512..401320 Chlamydophila pneumoniae TW-183 1467049 NP_876643.1 CDS CpB0369 NC_005043.1 401419 402858 R catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase complement(401419..402858) Chlamydophila pneumoniae TW-183 1467050 NP_876644.1 CDS CpB0370 NC_005043.1 402879 404147 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(402879..404147) Chlamydophila pneumoniae TW-183 1467051 NP_876645.1 CDS CpB0371 NC_005043.1 404270 404452 R hypothetical protein complement(404270..404452) Chlamydophila pneumoniae TW-183 1467052 NP_876646.1 CDS CpB0372 NC_005043.1 404552 405325 R expressed in response to temperature increase; may be involved in expression of genes involved in the developmental cycle of Chlamydia; RNA polymerase sigma factor sigma-28 complement(404552..405325) Chlamydophila pneumoniae TW-183 1467053 NP_876647.1 CDS CpB0373 NC_005043.1 405440 407188 R similar to flagellar secretion protein - Helicobacter pylori; type III secretion system protein complement(405440..407188) Chlamydophila pneumoniae TW-183 1467054 NP_876648.1 CDS CpB0374 NC_005043.1 407466 407741 D similar to ferredoxin IV - Rhodobacter capsulatus; ferredoxin IV 407466..407741 Chlamydophila pneumoniae TW-183 1467055 NP_876649.1 CDS CpB0375 NC_005043.1 408013 409047 D hypothetical protein 408013..409047 Chlamydophila pneumoniae TW-183 1467056 NP_876650.1 CDS CpB0376 NC_005043.1 409199 409351 D hypothetical protein 409199..409351 Chlamydophila pneumoniae TW-183 1467057 NP_876651.1 CDS CpB0377 NC_005043.1 409476 409943 D hypothetical protein 409476..409943 Chlamydophila pneumoniae TW-183 1467058 NP_876652.1 CDS CpB0378 NC_005043.1 410209 410430 R hypothetical protein complement(410209..410430) Chlamydophila pneumoniae TW-183 1467059 NP_876653.1 CDS CpB0379 NC_005043.1 410602 411339 D similar to hypothetical protein CT058 - Chlamydia trachomatis; hypothetical protein 410602..411339 Chlamydophila pneumoniae TW-183 1467060 NP_876654.1 CDS CpB0380 NC_005043.1 411269 411610 D hypothetical protein 411269..411610 Chlamydophila pneumoniae TW-183 1467061 NP_876655.1 CDS CpB0381 NC_005043.1 411851 413065 D similar to hypothetical protein CT058 - Chlamydia trachomatis; hypothetical protein 411851..413065 Chlamydophila pneumoniae TW-183 1467062 NP_876656.1 CDS CpB0382 NC_005043.1 413300 414415 D similar to hypothetical protein CT058 - Chlamydia trachomatis; hypothetical protein 413300..414415 Chlamydophila pneumoniae TW-183 1467063 NP_876657.1 CDS CpB0383 NC_005043.1 414647 415006 D hypothetical protein 414647..415006 Chlamydophila pneumoniae TW-183 1467064 NP_876658.1 CDS CpB0384 NC_005043.1 415187 415504 D hypothetical protein 415187..415504 Chlamydophila pneumoniae TW-183 1467065 NP_876659.1 CDS aarC NC_005043.1 415880 417721 D catalyzes the conversion of 2C-methyl-D-erythritol 2,4-clclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; these proteins appear to consist of duplicate domains as compared to Escherichia coli IspG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 415880..417721 Chlamydophila pneumoniae TW-183 1467066 NP_876660.1 CDS CpB0386 NC_005043.1 417778 418464 D similar to hypothetical protein CT056 - Chlamydia trachomatis; hypothetical protein 417778..418464 Chlamydophila pneumoniae TW-183 1467067 NP_876661.1 CDS CpB0387 NC_005043.1 418621 419118 D hypothetical protein 418621..419118 Chlamydophila pneumoniae TW-183 1467068 NP_876662.1 CDS CpB0388 NC_005043.1 419354 419797 D hypothetical protein 419354..419797 Chlamydophila pneumoniae TW-183 1467069 NP_876663.1 CDS CpB0389 NC_005043.1 419844 420938 R component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase complement(419844..420938) Chlamydophila pneumoniae TW-183 1467070 NP_876664.1 CDS sucA NC_005043.1 420942 423668 R SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 complement(420942..423668) Chlamydophila pneumoniae TW-183 1467071 NP_876665.1 CDS CpB0391 NC_005043.1 423822 424268 D similar to hypothetical protein CT053 - Chlamydia trachomatis; hypothetical protein 423822..424268 Chlamydophila pneumoniae TW-183 1467072 NP_876666.1 CDS CpB0392 NC_005043.1 424234 425379 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 424234..425379 Chlamydophila pneumoniae TW-183 1467073 NP_876667.1 CDS CpB0393 NC_005043.1 425534 427312 R similar to hypothetical protein CT326 - Chlamydia trachomatis; hypothetical protein complement(425534..427312) Chlamydophila pneumoniae TW-183 1467074 NP_876668.1 CDS CpB0394 NC_005043.1 427533 428249 R similar to hypothetical protein yraL - Chlamydia trachomatis; hypothetical protein complement(427533..428249) Chlamydophila pneumoniae TW-183 1467075 NP_876669.1 CDS CpB0395 NC_005043.1 428246 429193 R similar to hypothetical protein CT047 - Chlamydia trachomatis; hypothetical protein complement(428246..429193) Chlamydophila pneumoniae TW-183 1467076 NP_876670.1 CDS CpB0396 NC_005043.1 429359 429877 R similar to probable histone-like protein 2 - Chlamydia trachomatis; histone-like protein 2 complement(429359..429877) Chlamydophila pneumoniae TW-183 1467077 NP_876671.1 CDS CpB0397 NC_005043.1 430019 431518 R catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase complement(430019..431518) Chlamydophila pneumoniae TW-183 1467078 NP_876672.1 CDS CpB0398 NC_005043.1 431543 432025 R binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein complement(431543..432025) Chlamydophila pneumoniae TW-183 1467079 NP_876673.1 CDS CpB0399 NC_005043.1 432196 432696 R similar to hypothetical protein CT043 - Chlamydia trachomatis; hypothetical protein complement(432196..432696) Chlamydophila pneumoniae TW-183 1467080 NP_876674.1 CDS CpB0401 NC_005043.1 432829 434823 D similar to glycogen hydrolase (debranching) - Oryza sativa; glycogen hydrolase (debranching) 432829..434823 Chlamydophila pneumoniae TW-183 1467081 NP_876675.1 CDS CpB0400 NC_005043.1 434816 435634 R similar to hypothetical protein CT041 - Chlamydia trachomatis; hypothetical protein complement(434816..435634) Chlamydophila pneumoniae TW-183 1467082 NP_876676.1 CDS ruvB NC_005043.1 435631 436644 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(435631..436644) Chlamydophila pneumoniae TW-183 1467083 NP_876677.1 CDS CpB0403 NC_005043.1 437007 437192 R hypothetical protein complement(437007..437192) Chlamydophila pneumoniae TW-183 1467084 NP_876678.1 CDS dcd NC_005043.1 437314 437886 D Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 437314..437886 Chlamydophila pneumoniae TW-183 1467085 NP_876679.1 CDS CpB0405 NC_005043.1 437780 438226 D similar to hypothetical protein CT038 - Chlamydia trachomatis; hypothetical protein 437780..438226 Chlamydophila pneumoniae TW-183 1467086 NP_876680.1 CDS CpB0406 NC_005043.1 438236 439471 D similar to probable hemolysin family; hemolysin 438236..439471 Chlamydophila pneumoniae TW-183 1467087 NP_876681.1 CDS CpB0407 NC_005043.1 439464 440678 D similar to probable hemolysin family; hypothetical protein 439464..440678 Chlamydophila pneumoniae TW-183 1467088 NP_876682.1 CDS nifS NC_005043.1 440738 441853 R similar to nitrogen fixation nifS protein family; nitrogen fixation protein complement(440738..441853) Chlamydophila pneumoniae TW-183 1467089 NP_876683.1 CDS CpB0409 NC_005043.1 441878 442615 R similar to hypothetical protein yloO - Bacillus subtilis; hypothetical protein complement(441878..442615) Chlamydophila pneumoniae TW-183 1467090 NP_876684.1 CDS CpB0410 NC_005043.1 442679 442843 R hypothetical protein complement(442679..442843) Chlamydophila pneumoniae TW-183 1467091 NP_876685.1 CDS CpB0411 NC_005043.1 442954 443160 R hypothetical protein complement(442954..443160) Chlamydophila pneumoniae TW-183 1467092 NP_876686.1 CDS CpB0412 NC_005043.1 443268 444026 D similar to hypothetical protein CT253 - Chlamydia trachomatis; hypothetical protein 443268..444026 Chlamydophila pneumoniae TW-183 1467093 NP_876687.1 CDS CpB0413 NC_005043.1 444036 444809 D similar to hypothetical protein CT254 - Chlamydia trachomatis; hypothetical protein 444036..444809 Chlamydophila pneumoniae TW-183 1467094 NP_876688.1 CDS CpB0414 NC_005043.1 444992 445384 R similar to beta-lactamase regulatory protein homolog - Haemophilus influenzae; beta-lactamase regulatory protein complement(444992..445384) Chlamydophila pneumoniae TW-183 1467095 NP_876689.1 CDS CpB0415 NC_005043.1 445385 446494 R similar to A/G-specific adenine glycosylase - Escherichia coli; A/G-specific adenine glycosylase complement(445385..446494) Chlamydophila pneumoniae TW-183 1467096 NP_876690.1 CDS sfhB NC_005043.1 446515 447213 D similar to pseudouridine synthetase sfhB - Escherichia coli; pseudouridine synthase 446515..447213 Chlamydophila pneumoniae TW-183 1467097 NP_876691.1 CDS CpB0417 NC_005043.1 447368 448333 R similar to hypothetical protein CT105 - Chlamydia trachomatis; hypothetical protein complement(447368..448333) Chlamydophila pneumoniae TW-183 1467098 NP_876692.1 CDS CpB0418 NC_005043.1 448463 449209 R hypothetical protein complement(448463..449209) Chlamydophila pneumoniae TW-183 1467099 NP_876693.1 CDS CpB0419 NC_005043.1 449281 449451 R hypothetical protein complement(449281..449451) Chlamydophila pneumoniae TW-183 1467100 NP_876694.1 CDS CpB0421 NC_005043.1 449469 450368 D Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 449469..450368 Chlamydophila pneumoniae TW-183 1467101 NP_876695.1 CDS CpB0420 NC_005043.1 450355 451227 R similar to probable had hydrolase/phosphatase - Chlamydia trachomatis; had hydrolase/phosphatase complement(450355..451227) Chlamydophila pneumoniae TW-183 1467102 NP_876696.1 CDS CpB0422 NC_005043.1 451227 451418 R hypothetical protein complement(451227..451418) Chlamydophila pneumoniae TW-183 1467103 NP_876697.1 CDS CpB0423 NC_005043.1 451415 451711 R hypothetical protein complement(451415..451711) Chlamydophila pneumoniae TW-183 1467104 NP_876698.1 CDS CpB0424 NC_005043.1 451605 452084 D similar to hypothetical protein CT102 - Chlamydia trachomatis; hypothetical protein 451605..452084 Chlamydophila pneumoniae TW-183 1467105 NP_876699.1 CDS CpB0425 NC_005043.1 452145 452630 D similar to hypothetical protein CT260 - Chlamydia trachomatis; hypothetical protein 452145..452630 Chlamydophila pneumoniae TW-183 1467106 NP_876700.1 CDS CpB0426 NC_005043.1 452638 453336 D 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 452638..453336 Chlamydophila pneumoniae TW-183 1467107 NP_876701.1 CDS CpB0427 NC_005043.1 453333 454112 D similar to hypothetical protein CT262 - Chlamydia trachomatis; hypothetical protein 453333..454112 Chlamydophila pneumoniae TW-183 1467108 NP_876702.1 CDS CpB0429 NC_005043.1 454090 454749 D similar to hypothetical protein CT263 - Chlamydia trachomatis; hypothetical protein 454090..454749 Chlamydophila pneumoniae TW-183 1467109 NP_876703.1 CDS hetA NC_005043.1 454724 456703 R similar to Anabaena sp. ABC transporter; ATP-binding protein; HetA complement(454724..456703) Chlamydophila pneumoniae TW-183 1467110 NP_876704.1 CDS CpB0430 NC_005043.1 456669 457643 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(456669..457643) Chlamydophila pneumoniae TW-183 1467111 NP_876705.1 CDS CpB0431 NC_005043.1 457718 458998 R similar to hypothetical protein CT266 - Chlamydia trachomatis; hypothetical protein complement(457718..458998) Chlamydophila pneumoniae TW-183 1467112 NP_876706.1 CDS CpB0432 NC_005043.1 459054 459356 R similar to integration host factor beta chain - Pseudomonas aeruginosa; integration host factor beta chain complement(459054..459356) Chlamydophila pneumoniae TW-183 1467113 NP_876707.1 CDS CpB0433 NC_005043.1 459741 460535 R LytC; similar to N-acetylmuramoyl-L-alanine amidase 50K (lytC) precursor - Bacillus subtilis; N-acetylmuramoyl-L-alanine amidase complement(459741..460535) Chlamydophila pneumoniae TW-183 1467114 NP_876708.1 CDS murE NC_005043.1 460450 461901 R involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(460450..461901) Chlamydophila pneumoniae TW-183 1467115 NP_876709.1 CDS CpB0435 NC_005043.1 462374 464335 R similar to Neisseria meningitidis penicillin-binding protein 2; transglycolase; transpeptidase; penicillin-binding protein 2 complement(462374..464335) Chlamydophila pneumoniae TW-183 1467116 NP_876710.1 CDS CpB0436 NC_005043.1 464322 464609 R similar to hypothetical protein CT271 - Chlamydia trachomatis; hypothetical protein complement(464322..464609) Chlamydophila pneumoniae TW-183 1467117 NP_876711.1 CDS mraW NC_005043.1 464606 465499 R similar to predicted S-adenosylmethionine-dependent methyltransferase - Chlamydia trachomatis; S-adenosyl-methyltransferase MraW complement(464606..465499) Chlamydophila pneumoniae TW-183 1467118 NP_876712.1 CDS CpB0438 NC_005043.1 465743 466288 D similar to hypothetical protein CT273 - Chlamydia trachomatis; hypothetical protein 465743..466288 Chlamydophila pneumoniae TW-183 1467119 NP_876713.1 CDS CpB0439 NC_005043.1 466292 466720 D similar to hypothetical protein CT274 - Chlamydia trachomatis; hypothetical protein 466292..466720 Chlamydophila pneumoniae TW-183 1467120 NP_876714.1 CDS dnaA NC_005043.1 467113 468465 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosome replication initiator DnaA 467113..468465 Chlamydophila pneumoniae TW-183 1467121 NP_876715.1 CDS CpB0442 NC_005043.1 468481 469068 D similar to hypothetical protein CT276 - Chlamydia trachomatis; hypothetical protein 468481..469068 Chlamydophila pneumoniae TW-183 1467122 NP_876716.1 CDS CpB0441 NC_005043.1 469034 469612 R similar to hypothetical protein CT277 - Chlamydia trachomatis; hypothetical protein complement(469034..469612) Chlamydophila pneumoniae TW-183 1467123 NP_876717.1 CDS nrqB NC_005043.1 469708 471219 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 469708..471219 Chlamydophila pneumoniae TW-183 1467124 NP_876718.1 CDS CpB0444 NC_005043.1 471223 472185 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 471223..472185 Chlamydophila pneumoniae TW-183 1467125 NP_876719.1 CDS nqrD NC_005043.1 472182 472823 D Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D 472182..472823 Chlamydophila pneumoniae TW-183 1467126 NP_876720.1 CDS nqr5 NC_005043.1 472827 473597 D similar to Na+-translocating NADH-quinone reductase nqr5 - Vibrio alginolyticus; Na(+)-translocating NADH-quinone reductase subunit E 472827..473597 Chlamydophila pneumoniae TW-183 1467127 NP_876721.1 CDS CpB0447 NC_005043.1 473649 473984 R hypothetical protein complement(473649..473984) Chlamydophila pneumoniae TW-183 1467128 NP_876722.1 CDS CpB0448 NC_005043.1 474012 474317 R hypothetical protein complement(474012..474317) Chlamydophila pneumoniae TW-183 1467129 NP_876723.1 CDS CpB0449 NC_005043.1 474427 474777 R part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H complement(474427..474777) Chlamydophila pneumoniae TW-183 1467130 NP_876724.1 CDS CpB0450 NC_005043.1 474774 476852 R similar to hypothetical protein CT283 - Chlamydia trachomatis; hypothetical protein complement(474774..476852) Chlamydophila pneumoniae TW-183 1467131 NP_876725.1 CDS CpB0451 NC_005043.1 476973 478403 R similar to probable phospholipase D - Chlamydia trachomatis; phospholipase D complement(476973..478403) Chlamydophila pneumoniae TW-183 1467132 NP_876726.1 CDS CpB0452 NC_005043.1 478400 479119 R similar to probable lipoate protein ligase - Chlamydia trachomatis; lipoate protein ligase complement(478400..479119) Chlamydophila pneumoniae TW-183 1467133 NP_876727.1 CDS clpC NC_005043.1 479317 481854 D similar to class III stress response-related ATPase clpC - Bacillus subtilis; class III stress response-related ATPase 479317..481854 Chlamydophila pneumoniae TW-183 1467134 NP_876728.1 CDS mnmA NC_005043.1 481832 482917 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(481832..482917) Chlamydophila pneumoniae TW-183 1467135 NP_876729.1 CDS CpB0455 NC_005043.1 483141 483581 D hypothetical protein 483141..483581 Chlamydophila pneumoniae TW-183 1467136 NP_876730.1 CDS CpB0456 NC_005043.1 483606 484244 D hypothetical protein 483606..484244 Chlamydophila pneumoniae TW-183 1467137 NP_876731.1 CDS CpB0457 NC_005043.1 484392 485342 D similar to hypothetical protein CT007 - Chlamydia trachomatis; hypothetical protein 484392..485342 Chlamydophila pneumoniae TW-183 1467138 NP_876732.1 CDS CpB0458 NC_005043.1 485514 486032 D similar to hypothetical protein CT006 - Chlamydia trachomatis; hypothetical protein 485514..486032 Chlamydophila pneumoniae TW-183 1467139 NP_876733.1 CDS CpB0459 NC_005043.1 486230 487483 D similar to hypothetical protein CT005 - Chlamydia trachomatis; hypothetical protein 486230..487483 Chlamydophila pneumoniae TW-183 1467140 NP_876734.1 CDS CpB0460 NC_005043.1 487788 492011 D similar to outer membrane protein omp11 - Chlamydia pneumoniae; Omp11 487788..492011 Chlamydophila pneumoniae TW-183 1467141 NP_876735.1 CDS CpB0461 NC_005043.1 492027 492191 R hypothetical protein complement(492027..492191) Chlamydophila pneumoniae TW-183 1467142 NP_876736.1 CDS CpB0462 NC_005043.1 492273 495083 D similar to outer membrane protein omp5 - Chlamydia pneumoniae; Omp5 492273..495083 Chlamydophila pneumoniae TW-183 1467143 NP_876737.1 CDS CpB0463 NC_005043.1 495127 497919 D hypothetical protein 495127..497919 Chlamydophila pneumoniae TW-183 1467144 NP_876738.1 CDS CpB0464 NC_005043.1 498069 500855 D hypothetical protein 498069..500855 Chlamydophila pneumoniae TW-183 1467145 NP_876739.1 CDS CpB0465 NC_005043.1 501196 502305 R similar to hypothetical protein yxjG - Bacillus subtilis; hypothetical protein complement(501196..502305) Chlamydophila pneumoniae TW-183 1467146 NP_876740.1 CDS CpB0466 NC_005043.1 502346 502516 R hypothetical protein complement(502346..502516) Chlamydophila pneumoniae TW-183 1467147 NP_876741.1 CDS CpB0467 NC_005043.1 502828 505611 R hypothetical protein complement(502828..505611) Chlamydophila pneumoniae TW-183 1467148 NP_876742.1 CDS CpB0468 NC_005043.1 505774 508560 D hypothetical protein 505774..508560 Chlamydophila pneumoniae TW-183 1467149 NP_876743.1 CDS CpB0469 NC_005043.1 508818 510362 D hypothetical protein 508818..510362 Chlamydophila pneumoniae TW-183 1467150 NP_876744.1 CDS CpB0470 NC_005043.1 510733 513654 D hypothetical protein 510733..513654 Chlamydophila pneumoniae TW-183 1467151 NP_876745.1 CDS CpB0471 NC_005043.1 513681 516617 D similar to outer membrane protein 11 - Chlamydia pneumoniae, strain VR1310; hypothetical protein 513681..516617 Chlamydophila pneumoniae TW-183 1467152 NP_876746.1 CDS CpB0472 NC_005043.1 516670 516834 R hypothetical protein complement(516670..516834) Chlamydophila pneumoniae TW-183 1467153 NP_876747.1 CDS CpB0473 NC_005043.1 516955 518874 R hypothetical protein complement(516955..518874) Chlamydophila pneumoniae TW-183 1467154 NP_876748.1 CDS CpB0474 NC_005043.1 519477 521366 R hypothetical protein complement(519477..521366) Chlamydophila pneumoniae TW-183 1467155 NP_876749.1 CDS CpB0475 NC_005043.1 521734 523821 R hypothetical protein complement(521734..523821) Chlamydophila pneumoniae TW-183 1467156 NP_876750.1 CDS CpB0476 NC_005043.1 524117 524548 R hypothetical protein complement(524117..524548) Chlamydophila pneumoniae TW-183 1467157 NP_876751.1 CDS CpB0477 NC_005043.1 524490 525341 R hypothetical protein complement(524490..525341) Chlamydophila pneumoniae TW-183 1467158 NP_876752.1 CDS CpB0478 NC_005043.1 525342 525992 R hypothetical protein complement(525342..525992) Chlamydophila pneumoniae TW-183 1467159 NP_876753.1 CDS CpB0479 NC_005043.1 526535 528553 R hypothetical protein complement(526535..528553) Chlamydophila pneumoniae TW-183 1467160 NP_876754.1 CDS CpB0480 NC_005043.1 528689 529960 R hypothetical protein complement(528689..529960) Chlamydophila pneumoniae TW-183 1467161 NP_876755.1 CDS CpB0481 NC_005043.1 529864 530343 R hypothetical protein complement(529864..530343) Chlamydophila pneumoniae TW-183 1467162 NP_876756.1 CDS CpB0482 NC_005043.1 530369 530713 R hypothetical protein complement(530369..530713) Chlamydophila pneumoniae TW-183 1467163 NP_876757.1 CDS CpB0483 NC_005043.1 530766 530936 R hypothetical protein complement(530766..530936) Chlamydophila pneumoniae TW-183 1467164 NP_876758.1 CDS CpB0484 NC_005043.1 531246 534041 D similar to outer membrane protein 11 - Chlamydia pneumoniae, strain VR1310; hypothetical protein 531246..534041 Chlamydophila pneumoniae TW-183 1467165 NP_876759.1 CDS CpB0485 NC_005043.1 534080 536938 D similar to outer membrane protein 5 - Chlamydia pneumoniae, strain VR1310; hypothetical protein 534080..536938 Chlamydophila pneumoniae TW-183 1467166 NP_876760.1 CDS CpB0486 NC_005043.1 537184 537936 D similar to outer membrane protein 10 - Chlamydia pneumoniae, strain VR1310; hypothetical protein 537184..537936 Chlamydophila pneumoniae TW-183 1467167 NP_876761.1 CDS CpB0487 NC_005043.1 538041 538964 D similar to outer membrane protein 11 - Chlamydia pneumoniae, strain VR1310; hypothetical protein 538041..538964 Chlamydophila pneumoniae TW-183 1467168 NP_876762.1 CDS CpB0488 NC_005043.1 538858 540036 D similar to outer membrane protein, Chlamydia pneumoniae, strain VR1310; hypothetical protein 538858..540036 Chlamydophila pneumoniae TW-183 1467169 NP_876763.1 CDS CpB0489 NC_005043.1 540065 542905 D similar to outer membrane protein 11 - Chlamydia pneumoniae; hypothetical protein 540065..542905 Chlamydophila pneumoniae TW-183 1467170 NP_876764.1 CDS CpB0490 NC_005043.1 543079 545406 R hypothetical protein complement(543079..545406) Chlamydophila pneumoniae TW-183 1467171 NP_876765.1 CDS CpB0491 NC_005043.1 545568 546914 R hypothetical protein complement(545568..546914) Chlamydophila pneumoniae TW-183 1467172 NP_876766.1 CDS CpB0492 NC_005043.1 546954 547115 R hypothetical protein complement(546954..547115) Chlamydophila pneumoniae TW-183 1467173 NP_876767.1 CDS CpB0493 NC_005043.1 547125 548858 R similar to hypothetical protein CT365 - Chlamydia trachomatis; hypothetical protein complement(547125..548858) Chlamydophila pneumoniae TW-183 1467174 NP_876768.1 CDS CpB0494 NC_005043.1 549003 551165 R catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching enzyme complement(549003..551165) Chlamydophila pneumoniae TW-183 1467175 NP_876769.1 CDS CpB0495 NC_005043.1 551176 552165 R similar to hypothetical protein CT865 - Chlamydia trachomatis; hypothetical protein complement(551176..552165) Chlamydophila pneumoniae TW-183 1467176 NP_876770.1 CDS CpB0496 NC_005043.1 552162 553427 R similar to hypothetical protein yqeV - Bacillus subtilis; hypothetical protein complement(552162..553427) Chlamydophila pneumoniae TW-183 1467177 NP_876771.1 CDS CpB0497 NC_005043.1 553528 554946 R similar to GTP binding protein hflX family; GTP binding protein hflX complement(553528..554946) Chlamydophila pneumoniae TW-183 1467178 NP_876772.1 CDS CpB0498 NC_005043.1 554934 555746 R similar to probable metal dependent hydrolase - Chlamydia trachomatis; metal dependent hydrolase complement(554934..555746) Chlamydophila pneumoniae TW-183 1467179 NP_876773.1 CDS CpB0499 NC_005043.1 555968 556624 R similar to hypothetical protein CT383 - Chlamydia trachomatis; hypothetical protein complement(555968..556624) Chlamydophila pneumoniae TW-183 1467180 NP_876774.1 CDS CpB0502 NC_005043.1 558279 559013 R similar to arginine-binding periplasmic protein 2 precursor - Escherichia coli; arginine-binding periplasmic protein 2 precursor complement(558279..559013) Chlamydophila pneumoniae TW-183 1467181 NP_876775.1 CDS CpB0503 NC_005043.1 559187 562288 D hypothetical protein 559187..562288 Chlamydophila pneumoniae TW-183 1467182 NP_876776.1 CDS CpB0504 NC_005043.1 562291 563148 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase 562291..563148 Chlamydophila pneumoniae TW-183 1467183 NP_876777.1 CDS CpB0505 NC_005043.1 563359 563553 D hypothetical protein 563359..563553 Chlamydophila pneumoniae TW-183 1467184 NP_876778.1 CDS CpB0506 NC_005043.1 563723 565057 R similar to prolin permease protein family; prolin permease protein complement(563723..565057) Chlamydophila pneumoniae TW-183 1467185 NP_876779.1 CDS CpB0507 NC_005043.1 565430 566983 R similar to hypothetical protein CT384 - Chlamydia trachomatis; hypothetical protein complement(565430..566983) Chlamydophila pneumoniae TW-183 1467186 NP_876780.1 CDS CpB0508 NC_005043.1 567085 567417 R similar to histidine triad homology family; histidine triad homology complement(567085..567417) Chlamydophila pneumoniae TW-183 1467187 NP_876781.1 CDS CpB0509 NC_005043.1 567414 568286 R similar to probable metal dependent hydrolase - Chlamydia trachomatis; hypothetical protein complement(567414..568286) Chlamydophila pneumoniae TW-183 1467188 NP_876782.1 CDS CpB0510 NC_005043.1 568600 570657 D similar to hypothetical protein CT387 - Chlamydia trachomatis; hypothetical protein 568600..570657 Chlamydophila pneumoniae TW-183 1467189 NP_876783.1 CDS CpB0511 NC_005043.1 570654 571793 R similar to hypothetical protein CT389 - Chlamydia trachomati; hypothetical protein complement(570654..571793) Chlamydophila pneumoniae TW-183 1467190 NP_876784.1 CDS CpB0512 NC_005043.1 571973 572128 D hypothetical protein 571973..572128 Chlamydophila pneumoniae TW-183 1467191 NP_876785.1 CDS CpB0513 NC_005043.1 572173 572325 R hypothetical protein complement(572173..572325) Chlamydophila pneumoniae TW-183 1467192 NP_876786.1 CDS CpB0514 NC_005043.1 572464 572685 R hypothetical protein complement(572464..572685) Chlamydophila pneumoniae TW-183 1467193 NP_876787.1 CDS CpB0515 NC_005043.1 572852 574117 D catalyzes the interconversion of tetrahydrodipicolinate and L,L-diaminopimelate in lysine biosynthesis; L,L-diaminopimelate aminotransferase 572852..574117 Chlamydophila pneumoniae TW-183 1467194 NP_876788.1 CDS CpB0516 NC_005043.1 574114 575136 D similar to hypothetical protein CT391 - Chlamydia trachomatis; hypothetical protein 574114..575136 Chlamydophila pneumoniae TW-183 1467195 NP_876789.1 CDS CpB0517 NC_005043.1 575138 575410 R similar to hypothetical protein CT388 - Chlamydia trachomatis; hypothetical protein complement(575138..575410) Chlamydophila pneumoniae TW-183 1467196 NP_876790.1 CDS CpB0518 NC_005043.1 575403 576356 R hypothetical protein complement(575403..576356) Chlamydophila pneumoniae TW-183 1467197 NP_876791.1 CDS CpB0519 NC_005043.1 576524 577681 R similar to hypothetical protein yprS - Chlamydia trachomatis; hypothetical protein complement(576524..577681) Chlamydophila pneumoniae TW-183 1467198 NP_876792.1 CDS CpB0520 NC_005043.1 577981 579687 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 577981..579687 Chlamydophila pneumoniae TW-183 1467199 NP_876793.1 CDS hrcA NC_005043.1 579752 580975 D Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 579752..580975 Chlamydophila pneumoniae TW-183 1467200 NP_876794.1 CDS grpE NC_005043.1 580972 581526 D heat shock protein; similar to heat shock protein grpE - Bacillus subtilis; hypothetical protein 580972..581526 Chlamydophila pneumoniae TW-183 1467201 NP_876795.1 CDS dnaK NC_005043.1 581556 583538 D heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 581556..583538 Chlamydophila pneumoniae TW-183 1467202 NP_876796.1 CDS CpB0524 NC_005043.1 583575 583808 R hypothetical protein complement(583575..583808) Chlamydophila pneumoniae TW-183 1467203 NP_876797.1 CDS CpB0525 NC_005043.1 583809 585839 D similar to proteins of ribonuclease family; proteins of ribonuclease 583809..585839 Chlamydophila pneumoniae TW-183 1467204 NP_876798.1 CDS CpB0526 NC_005043.1 585841 586431 D similar to N-methylpurine-DNA glycosylase - Mus musculus; N-methylpurine-DNA glycosylase 585841..586431 Chlamydophila pneumoniae TW-183 1467205 NP_876799.1 CDS CpB0527 NC_005043.1 586383 587165 D similar to hypothetical protein CT421 - Chlamydia trachomatis; hypothetical protein 586383..587165 Chlamydophila pneumoniae TW-183 1467206 NP_876800.1 CDS CpB0528 NC_005043.1 587283 587447 D similar to hypothetical protein CT421.1 - Chlamydia trachomatis; hypothetical protein 587283..587447 Chlamydophila pneumoniae TW-183 1467207 NP_876801.1 CDS CpB0529 NC_005043.1 587464 587625 D similar to hypothetical protein CT421.2 - Chlamydia trachomatis; hypothetical protein 587464..587625 Chlamydophila pneumoniae TW-183 1467208 NP_876802.1 CDS CpB0530 NC_005043.1 587657 588133 D similar to hypothetical protein CT422 - Chlamydia trachomatis; hypothetical protein 587657..588133 Chlamydophila pneumoniae TW-183 1467209 NP_876803.1 CDS CpB0531 NC_005043.1 588135 589298 D similar to hemolysin C - Treponema hyodysenteriae; hemolysin C 588135..589298 Chlamydophila pneumoniae TW-183 1467210 NP_876804.1 CDS CpB0532 NC_005043.1 589463 589813 D similar to sigma F regulatory factor - Bacillus subtilis; sigma F regulatory factor 589463..589813 Chlamydophila pneumoniae TW-183 1467211 NP_876805.1 CDS CpB0533 NC_005043.1 589875 591737 D similar to hypothetical protein CT425 - Chlamydia trachomatis; hypothetical protein 589875..591737 Chlamydophila pneumoniae TW-183 1467212 NP_876806.1 CDS CpB0534 NC_005043.1 591924 593078 D similar to hypothetical protein CT426 - Chlamydia trachomatis; hypothetical protein 591924..593078 Chlamydophila pneumoniae TW-183 1467213 NP_876807.1 CDS CpB0535 NC_005043.1 593051 593845 D hypothetical protein 593051..593845 Chlamydophila pneumoniae TW-183 1467214 NP_876808.1 CDS ubiE NC_005043.1 593793 594506 D Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 593793..594506 Chlamydophila pneumoniae TW-183 1467215 NP_876809.1 CDS CpB0537 NC_005043.1 594574 596193 R hypothetical protein complement(594574..596193) Chlamydophila pneumoniae TW-183 1467216 NP_876810.1 CDS CpB0538 NC_005043.1 596114 596953 R hypothetical protein complement(596114..596953) Chlamydophila pneumoniae TW-183 1467217 NP_876811.1 CDS CpB0539 NC_005043.1 597151 598125 R similar to hypothetical protein CT429 - Chlamydia trachomatis; hypothetical protein complement(597151..598125) Chlamydophila pneumoniae TW-183 1467218 NP_876812.1 CDS dapF NC_005043.1 598223 599008 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(598223..599008) Chlamydophila pneumoniae TW-183 1467219 NP_876813.1 CDS clp NC_005043.1 598965 599540 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(598965..599540) Chlamydophila pneumoniae TW-183 1467220 NP_876814.1 CDS glyA NC_005043.1 599560 601119 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(599560..601119) Chlamydophila pneumoniae TW-183 1467221 NP_876815.1 CDS hemD NC_005043.1 601309 601980 D catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 601309..601980 Chlamydophila pneumoniae TW-183 1467222 NP_876816.1 CDS CpB0544 NC_005043.1 602045 602377 D hypothetical protein 602045..602377 Chlamydophila pneumoniae TW-183 1467223 NP_876817.1 CDS CpB0545 NC_005043.1 602425 603504 D hypothetical protein 602425..603504 Chlamydophila pneumoniae TW-183 1467224 NP_876818.1 CDS CpB0546 NC_005043.1 603844 604608 D similar to hypothetical protein CT398 - Chlamydia trachomatis; hypothetical protein 603844..604608 Chlamydophila pneumoniae TW-183 1467225 NP_876819.1 CDS kpsF NC_005043.1 605029 606018 R similar to kpsF protein - Escherichia coli; KpsF complement(605029..606018) Chlamydophila pneumoniae TW-183 1467226 NP_876820.1 CDS CpB0548 NC_005043.1 606045 607226 R Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA; branched-chain alpha-keto acid dehydrogenase subunit E2 complement(606045..607226) Chlamydophila pneumoniae TW-183 1467227 NP_876821.1 CDS CpB0549 NC_005043.1 607240 608484 R similar to proton/sodium glutamate symport transporter family; proton/sodium glutamate symport transporter complement(607240..608484) Chlamydophila pneumoniae TW-183 1467228 NP_876822.1 CDS lpxK NC_005043.1 608484 609581 R transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase complement(608484..609581) Chlamydophila pneumoniae TW-183 1467229 NP_876823.1 CDS spoU NC_005043.1 609779 610576 R similar to tRNA methylase spoU - Escherichia coli; tRNA methylase complement(609779..610576) Chlamydophila pneumoniae TW-183 1467230 NP_876824.1 CDS CpB0552 NC_005043.1 610564 611391 R similar to probable SAM dependent methyltransferase - Chlamydia trachomatis; SAM dependent methyltransferase complement(610564..611391) Chlamydophila pneumoniae TW-183 1467231 NP_876825.1 CDS CpB0553 NC_005043.1 611394 611996 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(611394..611996) Chlamydophila pneumoniae TW-183 1467232 NP_876826.1 CDS nrdR NC_005043.1 612252 612710 D similar to hypothetical protein CT406 - Chlamydia trachomatis; transcriptional regulator NrdR 612252..612710 Chlamydophila pneumoniae TW-183 1467233 NP_876827.1 CDS CpB0555 NC_005043.1 612735 613109 D similar to general stress protein 160 - Bacillus subtilis; general stress protein 160 612735..613109 Chlamydophila pneumoniae TW-183 1467234 NP_876828.1 CDS lspA NC_005043.1 613145 613621 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 613145..613621 Chlamydophila pneumoniae TW-183 1467235 NP_876829.1 CDS CpB0557 NC_005043.1 613667 615016 D similar to alanine/glycine transporter protein family; alanine/glycine transporter protein 613667..615016 Chlamydophila pneumoniae TW-183 1467236 NP_876830.1 CDS CpB0558 NC_005043.1 615155 615514 D similar to hypothetical protein CT814.1 - Chlamydia trachomatis; hypothetical protein 615155..615514 Chlamydophila pneumoniae TW-183 1467237 NP_876831.1 CDS CpB0559 NC_005043.1 615519 615836 D similar to hypothetical protein CT814 - Chlamydia trachomatis; hypothetical protein 615519..615836 Chlamydophila pneumoniae TW-183 1467238 NP_876832.1 CDS CpB0560 NC_005043.1 616027 618870 D similar to outer membrane protein omp11 - Chlamydia pneumoniae, strain VR1310; Omp11 616027..618870 Chlamydophila pneumoniae TW-183 1467239 NP_876833.1 CDS CpB0561 NC_005043.1 619016 624187 D similar to outer membrane protein omp5 - Chlamydia pneumoniae; hypothetical protein 619016..624187 Chlamydophila pneumoniae TW-183 1467240 NP_876834.1 CDS CpB0562 NC_005043.1 624492 625328 D similar to adhesin B protein family; adhesin 624492..625328 Chlamydophila pneumoniae TW-183 1467241 NP_876835.1 CDS CpB0563 NC_005043.1 625325 626062 D similar to ABC transporter ATPase family; ABC transporter ATPase 625325..626062 Chlamydophila pneumoniae TW-183 1467242 NP_876836.1 CDS CpB0565 NC_005043.1 626041 626928 D similar to iron transport protein - Yersinia pestis; iron transport protein 626041..626928 Chlamydophila pneumoniae TW-183 1467243 NP_876837.1 CDS obgE NC_005043.1 626844 627851 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(626844..627851) Chlamydophila pneumoniae TW-183 1467244 NP_876838.1 CDS rpmA NC_005043.1 627952 628206 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(627952..628206) Chlamydophila pneumoniae TW-183 1467245 NP_876839.1 CDS rplU NC_005043.1 628231 628554 R similar to ribosomal protein L21 family; 50S ribosomal protein L21 complement(628231..628554) Chlamydophila pneumoniae TW-183 1467246 NP_876840.2 CDS ispF NC_005043.1 628983 629513 D catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 628983..629513 Chlamydophila pneumoniae TW-183 1467247 NP_876841.1 CDS CpB0569 NC_005043.1 629510 630553 R similar to sulfite reductase [NADPH] flavoprotein alpha-component - Escherichia coli; sulfite reductase [NADPH] flavoprotein alpha-component complement(629510..630553) Chlamydophila pneumoniae TW-183 1467248 NP_876842.2 CDS rpsJ NC_005043.1 630574 630891 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(630574..630891) Chlamydophila pneumoniae TW-183 1467249 NP_876843.1 CDS CpB0571 NC_005043.1 630899 632983 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(630899..632983) Chlamydophila pneumoniae TW-183 1467250 NP_876844.1 CDS CpB0572 NC_005043.1 633017 633490 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(633017..633490) Chlamydophila pneumoniae TW-183 1467251 NP_876845.1 CDS rpsL NC_005043.1 633538 633909 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(633538..633909) Chlamydophila pneumoniae TW-183 1467252 NP_876846.1 CDS CpB0575 NC_005043.1 633969 634145 D hypothetical protein 633969..634145 Chlamydophila pneumoniae TW-183 1467253 NP_876847.1 CDS CpB0574 NC_005043.1 634131 635069 R hypothetical protein complement(634131..635069) Chlamydophila pneumoniae TW-183 1467254 NP_876848.1 CDS CpB0576 NC_005043.1 635128 635466 D similar to hypothetical protein CT440 - Chlamydia trachomatis; hypothetical protein 635128..635466 Chlamydophila pneumoniae TW-183 1467255 NP_876849.1 CDS CpB0577 NC_005043.1 635629 637566 D similar to carboxy-terminal proteinase precursor - Escherichia coli; carboxy-terminal proteinase precursor 635629..637566 Chlamydophila pneumoniae TW-183 1467256 NP_876850.1 CDS CpB0578 NC_005043.1 637644 638234 R similar to sulfur-rich protein - Chlamydia psittaci; sulfur-rich protein complement(637644..638234) Chlamydophila pneumoniae TW-183 1467257 NP_876851.1 CDS CpB0579 NC_005043.1 638513 640183 R 60K cysteine-rich outer membrane protein precursor complement(638513..640183) Chlamydophila pneumoniae TW-183 1467258 NP_876852.1 CDS CpB0580 NC_005043.1 640350 640622 R 9K cysteine-rich outer membrane protein complement(640350..640622) Chlamydophila pneumoniae TW-183 1467259 NP_876853.1 CDS CpB0581 NC_005043.1 641064 641252 D similar to hypothetical protein CT444.1 - Chlamydia trachomatis; hypothetical protein 641064..641252 Chlamydophila pneumoniae TW-183 1467260 NP_876854.1 CDS gltX NC_005043.1 641417 642934 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(641417..642934) Chlamydophila pneumoniae TW-183 1467261 NP_876855.1 CDS CpB0583 NC_005043.1 643190 643726 R similar to early upstream orf EUO - Chlamydia psittaci; early upstream orf EUO complement(643190..643726) Chlamydophila pneumoniae TW-183 1467262 NP_876856.1 CDS CpB0584 NC_005043.1 644237 645358 R similar to hypothetical 43.0K protein - Chlamydia psittaci; hypothetical protein complement(644237..645358) Chlamydophila pneumoniae TW-183 1467263 NP_876857.1 CDS recJ NC_005043.1 645612 647378 R similar to ssDNA-specific exonuclease recJ - Escherichia coli; ssDNA-specific exonuclease complement(645612..647378) Chlamydophila pneumoniae TW-183 1467264 NP_876858.1 CDS CpB0586 NC_005043.1 647464 651672 R part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; in these organisms there is an unknown N-terminal domain; bifunctional preprotein translocase subunit SecD/SecF complement(647464..651672) Chlamydophila pneumoniae TW-183 1467265 NP_876859.1 CDS CpB0587 NC_005043.1 651852 652952 R similar to sensory transduction regulatory protein - Methanobacterium thermoautotrophicum; hypothetical protein complement(651852..652952) Chlamydophila pneumoniae TW-183 1467266 NP_876860.1 CDS CpB0588 NC_005043.1 653463 654215 D catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 653463..654215 Chlamydophila pneumoniae TW-183 1467267 NP_876861.1 CDS CpB0589 NC_005043.1 654216 655142 D similar to phosphatidate cytidylyltransferase - Escherichia coli; phosphatidate cytidylyltransferase 654216..655142 Chlamydophila pneumoniae TW-183 1467268 NP_876862.1 CDS cmk NC_005043.1 655139 655789 D Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 655139..655789 Chlamydophila pneumoniae TW-183 1467269 NP_876863.1 CDS CpB0591 NC_005043.1 655786 656424 D similar to glycerol-3-phosphate acyltransferase - Homo sapiens; glycerol-3-phosphate acyltransferase 655786..656424 Chlamydophila pneumoniae TW-183 1467270 NP_876864.1 CDS argS NC_005043.1 656429 658114 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 656429..658114 Chlamydophila pneumoniae TW-183 1467271 NP_876865.1 CDS CpB0592 NC_005043.1 658068 659444 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(658068..659444) Chlamydophila pneumoniae TW-183 1467272 NP_876866.1 CDS CpB0594 NC_005043.1 659674 661941 D similar to hypothetical protein CT456 - Chlamydia trachomatis; hypothetical protein 659674..661941 Chlamydophila pneumoniae TW-183 1467273 NP_876867.1 CDS CpB0595 NC_005043.1 662010 662726 R similar to hypothetical protein CT457 - Chlamydia trachomatis; hypothetical protein complement(662010..662726) Chlamydophila pneumoniae TW-183 1467274 NP_876868.1 CDS CpB0596 NC_005043.1 662713 663267 R hypothetical protein complement(662713..663267) Chlamydophila pneumoniae TW-183 1467275 NP_876869.1 CDS bltD NC_005043.1 663301 663816 R similar to spermine/spermidine acetyltransferase bltD - Bacillus subtilis; spermine/spermidine acetyltransferase complement(663301..663816) Chlamydophila pneumoniae TW-183 1467276 NP_876870.1 CDS prfB NC_005043.1 663813 664574 R recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 complement(663813..664574) Chlamydophila pneumoniae TW-183 1467277 NP_876871.1 CDS CpB0599 NC_005043.1 664821 665000 D similar to hypothetical protein - Synechocystis sp.; hypothetical protein 664821..665000 Chlamydophila pneumoniae TW-183 1467278 NP_876872.1 CDS CpB0600 NC_005043.1 665062 665217 R similar to histone H3 family; histone H3 complement(665062..665217) Chlamydophila pneumoniae TW-183 1467279 NP_876873.1 CDS CpB0601 NC_005043.1 665217 665480 D similar to hypothetical protein CT460 - Chlamydia trachomatis; hypothetical protein 665217..665480 Chlamydophila pneumoniae TW-183 1467280 NP_876874.1 CDS yaeI NC_005043.1 665728 666690 D similar to probable phosphoesterase yaeI - Escherichia coli; phosphoesterase 665728..666690 Chlamydophila pneumoniae TW-183 1467281 NP_876875.1 CDS ispD NC_005043.1 666683 667318 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 666683..667318 Chlamydophila pneumoniae TW-183 1467282 NP_876876.1 CDS truA NC_005043.1 667315 668118 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 667315..668118 Chlamydophila pneumoniae TW-183 1467283 NP_876877.1 CDS CpB0604 NC_005043.1 668064 668756 R similar to probable phosphoglycolate phosphatase - Chlamydia trachomatis; phosphoglycolate phosphatase complement(668064..668756) Chlamydophila pneumoniae TW-183 1467284 NP_876878.1 CDS CpB0606 NC_005043.1 668825 669502 D similar to hypothetical protein CT465 - Chlamydia trachomatis; hypothetical protein 668825..669502 Chlamydophila pneumoniae TW-183 1467285 NP_876879.1 CDS CpB0607 NC_005043.1 669740 670042 D similar to hypothetical protein CT466 - Chlamydia trachomatis; hypothetical protein 669740..670042 Chlamydophila pneumoniae TW-183 1467286 NP_876880.1 CDS atoS NC_005043.1 670029 671123 D sensor protein; similar to sensor protein AtoS - Escherichia coli; AtoS 670029..671123 Chlamydophila pneumoniae TW-183 1467287 NP_876881.1 CDS CpB0609 NC_005043.1 671184 673028 R hypothetical protein complement(671184..673028) Chlamydophila pneumoniae TW-183 1467288 NP_876882.1 CDS atoC NC_005043.1 673324 674508 D similar to acetate metabolism regulatory protein atoC - Escherichia coli; acetate metabolism regulatory protein 673324..674508 Chlamydophila pneumoniae TW-183 1467289 NP_876883.1 CDS CpB0611 NC_005043.1 674763 675449 D similar to ribosomal protein S30AE family homolog yvyD - Bacillus subtilis; hypothetical protein 674763..675449 Chlamydophila pneumoniae TW-183 1467290 NP_876884.1 CDS CpB0612 NC_005043.1 675394 675951 D similar to hypothetical protein CT469 - Chlamydia trachomatis; hypothetical protein 675394..675951 Chlamydophila pneumoniae TW-183 1467291 NP_876885.1 CDS recO NC_005043.1 675962 676720 D involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 675962..676720 Chlamydophila pneumoniae TW-183 1467292 NP_876886.1 CDS CpB0614 NC_005043.1 676835 677434 R similar to hypothetical protein CT471 - Chlamydia trachomatis; hypothetical protein complement(676835..677434) Chlamydophila pneumoniae TW-183 1467293 NP_876887.1 CDS CpB0615 NC_005043.1 677695 678345 D similar to hypothetical protein CT472 - Chlamydia trachomatis; hypothetical protein 677695..678345 Chlamydophila pneumoniae TW-183 1467294 NP_876888.1 CDS hlyA NC_005043.1 678475 678786 D similar to alpha-hemolysin hlyA - Aeromonas hydrophila; hypothetical protein 678475..678786 Chlamydophila pneumoniae TW-183 1467295 NP_876889.1 CDS CpB0616 NC_005043.1 678710 679798 R similar to hypothetical protein CT474 - Chlamydia trachomatis; hypothetical protein complement(678710..679798) Chlamydophila pneumoniae TW-183 1467296 NP_876890.1 CDS pheT NC_005043.1 679905 682283 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 679905..682283 Chlamydophila pneumoniae TW-183 1467297 NP_876891.1 CDS CpB0619 NC_005043.1 682280 683251 D similar to methylated-DNA-protein-cysteine S-methyltransferase - Methanococcus jannaschii; hypothetical protein 682280..683251 Chlamydophila pneumoniae TW-183 1467298 NP_876892.1 CDS CpB0620 NC_005043.1 683261 683782 D similar to methylated-DNA-protein-cysteine S-methyltransferase family; methylated-DNA-protein-cysteine S-methyltransferase 683261..683782 Chlamydophila pneumoniae TW-183 1467299 NP_876893.1 CDS CpB0621 NC_005043.1 683798 685537 R similar to oligopeptide ABC transporter permease protein family; oligopeptide ABC transporter permease protein complement(683798..685537) Chlamydophila pneumoniae TW-183 1467300 NP_876894.1 CDS dppB NC_005043.1 685538 687019 R similar to dipeptide transport system permease protein dppB - Bacillus subtilis; dipeptide transport system permease protein complement(685538..687019) Chlamydophila pneumoniae TW-183 1467301 NP_876895.1 CDS CpB0623 NC_005043.1 687001 689109 R similar to Bacillus subtilis oligopeptide ABC transporter; oligopeptide-binding protein; oligopeptide ABC transporter complement(687001..689109) Chlamydophila pneumoniae TW-183 1467302 NP_876896.1 CDS CpB0624 NC_005043.1 689146 689469 R hypothetical protein complement(689146..689469) Chlamydophila pneumoniae TW-183 1467303 NP_876897.1 CDS CpB0625 NC_005043.1 689783 690229 R hypothetical protein complement(689783..690229) Chlamydophila pneumoniae TW-183 1467304 NP_876898.1 CDS CpB0626 NC_005043.1 690423 691427 R similar to hypothetical protein CT484 - Chlamydia trachomatis; hypothetical protein complement(690423..691427) Chlamydophila pneumoniae TW-183 1467305 NP_876899.2 CDS hemH NC_005043.1 691527 692510 D protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 691527..692510 Chlamydophila pneumoniae TW-183 1467306 NP_876900.1 CDS CpB0628 NC_005043.1 692515 693267 R similar to glutamine-binding periplasmic protein precursor - Escherichia coli; glutamine-binding periplasmic protein precursor complement(692515..693267) Chlamydophila pneumoniae TW-183 1467307 NP_876901.1 CDS CpB0629 NC_005043.1 693469 694029 R similar to probable methylase - Chlamydia trachomatis; methylase complement(693469..694029) Chlamydophila pneumoniae TW-183 1467308 NP_876902.1 CDS CpB0630 NC_005043.1 694026 694793 R similar to probable phosphoesterase CT488 - Chlamydia trachomatis; hypothetical protein complement(694026..694793) Chlamydophila pneumoniae TW-183 1467309 NP_876903.1 CDS CpB0631 NC_005043.1 694892 696217 R similar to glucose-1-phosphate adenylyltransferase - Anabaena sp.; glucose-1-phosphate adenylyltransferase complement(694892..696217) Chlamydophila pneumoniae TW-183 1467310 NP_876904.1 CDS CpB0632 NC_005043.1 696335 696967 R catalyzes the formation of orotidine monophosphate from 5-phosphoribosyl-1-pyrophosphate and orotate; orotate phosphoribosyltransferase complement(696335..696967) Chlamydophila pneumoniae TW-183 1467311 NP_876905.1 CDS CpB0633 NC_005043.1 697027 697311 D similar to hypothetical protein CT490 - Chlamydia trachomatis; hypothetical protein 697027..697311 Chlamydophila pneumoniae TW-183 1467312 NP_876906.1 CDS rho NC_005043.1 697348 698742 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(697348..698742) Chlamydophila pneumoniae TW-183 1467313 NP_876907.1 CDS coaE NC_005043.1 698739 699356 R catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase complement(698739..699356) Chlamydophila pneumoniae TW-183 1467314 NP_876908.1 CDS CpB0636 NC_005043.1 699341 701953 R has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I complement(699341..701953) Chlamydophila pneumoniae TW-183 1467315 NP_876909.1 CDS CpB0637 NC_005043.1 701977 702969 R similar to proteinase IV family; proteinase IV complement(701977..702969) Chlamydophila pneumoniae TW-183 1467316 NP_876910.1 CDS CpB0638 NC_005043.1 703102 704724 R similar to plastidic ATP/ADP-transporter - Solanum tuberosum; plastidic ATP/ADP-transporter complement(703102..704724) Chlamydophila pneumoniae TW-183 1467317 NP_876911.1 CDS CpB0639 NC_005043.1 704953 705459 R similar to CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (phosphatidylglycerophosphate synthase) (PGP synthase) - Pseudomonas fluorescens; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(704953..705459) Chlamydophila pneumoniae TW-183 1467318 NP_876912.1 CDS CpB0640 NC_005043.1 705823 705978 R hypothetical protein complement(705823..705978) Chlamydophila pneumoniae TW-183 1467319 NP_876913.1 CDS dnaB NC_005043.1 706056 707462 D unwinds double stranded DNA; replicative DNA helicase 706056..707462 Chlamydophila pneumoniae TW-183 1467320 NP_876914.1 CDS CpB0642 NC_005043.1 707591 707749 R hypothetical protein complement(707591..707749) Chlamydophila pneumoniae TW-183 1467321 NP_876915.1 CDS gidA NC_005043.1 707806 709641 D GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 707806..709641 Chlamydophila pneumoniae TW-183 1467322 NP_876916.1 CDS CpB0644 NC_005043.1 709628 710335 D similar to lipoate--protein ligase A - Escherichia coli; lipoate-protein ligase A 709628..710335 Chlamydophila pneumoniae TW-183 1467323 NP_876917.1 CDS ndk NC_005043.1 710332 710766 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(710332..710766) Chlamydophila pneumoniae TW-183 1467324 NP_876918.1 CDS ruvA NC_005043.1 710838 711461 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(710838..711461) Chlamydophila pneumoniae TW-183 1467325 NP_876919.1 CDS ruvC NC_005043.1 711463 711969 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(711463..711969) Chlamydophila pneumoniae TW-183 1467326 NP_876920.1 CDS CpB0648 NC_005043.1 712112 713074 R similar to hypothetical protein CT503 - Chlamydia trachomatis; hypothetical protein complement(712112..713074) Chlamydophila pneumoniae TW-183 1467327 NP_876921.1 CDS CpB0649 NC_005043.1 713482 714315 R similar to hypothetical protein CT504 - Chlamydia trachomatis; hypothetical protein complement(713482..714315) Chlamydophila pneumoniae TW-183 1467328 NP_876922.1 CDS CpB0650 NC_005043.1 714330 715337 R catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase complement(714330..715337) Chlamydophila pneumoniae TW-183 1467329 NP_876923.1 CDS rplQ NC_005043.1 715379 715807 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(715379..715807) Chlamydophila pneumoniae TW-183 1467330 NP_876924.1 CDS CpB0652 NC_005043.1 715814 716938 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(715814..716938) Chlamydophila pneumoniae TW-183 1467331 NP_876925.1 CDS CpB0653 NC_005043.1 716959 717360 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(716959..717360) Chlamydophila pneumoniae TW-183 1467332 NP_876926.1 CDS rpsM NC_005043.1 717382 717750 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(717382..717750) Chlamydophila pneumoniae TW-183 1467333 NP_876927.1 CDS secY NC_005043.1 717806 719179 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(717806..719179) Chlamydophila pneumoniae TW-183 1467334 NP_876928.1 CDS rplO NC_005043.1 719204 719638 R late assembly protein; 50S ribosomal protein L15 complement(719204..719638) Chlamydophila pneumoniae TW-183 1467335 NP_876929.1 CDS rpsE NC_005043.1 719631 720128 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(719631..720128) Chlamydophila pneumoniae TW-183 1467336 NP_876930.1 CDS rplR NC_005043.1 720146 720517 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(720146..720517) Chlamydophila pneumoniae TW-183 1467337 NP_876931.1 CDS rplF NC_005043.1 720528 721079 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(720528..721079) Chlamydophila pneumoniae TW-183 1467338 NP_876932.1 CDS rpsH NC_005043.1 721106 721507 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(721106..721507) Chlamydophila pneumoniae TW-183 1467339 NP_876933.1 CDS rplE NC_005043.1 721525 722067 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(721525..722067) Chlamydophila pneumoniae TW-183 1467340 NP_876934.1 CDS rplX NC_005043.1 722069 722404 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(722069..722404) Chlamydophila pneumoniae TW-183 1467341 NP_876935.1 CDS rplN NC_005043.1 722418 722786 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(722418..722786) Chlamydophila pneumoniae TW-183 1467342 NP_876936.1 CDS rpsQ NC_005043.1 722809 723069 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(722809..723069) Chlamydophila pneumoniae TW-183 1467343 NP_876937.1 CDS rpmC NC_005043.1 723062 723280 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(723062..723280) Chlamydophila pneumoniae TW-183 1467344 NP_876938.1 CDS rplP NC_005043.1 723283 723699 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(723283..723699) Chlamydophila pneumoniae TW-183 1467345 NP_876939.1 CDS rpsC NC_005043.1 723728 724399 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(723728..724399) Chlamydophila pneumoniae TW-183 1467346 NP_876940.1 CDS rplV NC_005043.1 724415 724750 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(724415..724750) Chlamydophila pneumoniae TW-183 1467347 NP_876941.1 CDS rpsS NC_005043.1 724769 725035 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(724769..725035) Chlamydophila pneumoniae TW-183 1467348 NP_876942.1 CDS rplB NC_005043.1 725041 725895 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(725041..725895) Chlamydophila pneumoniae TW-183 1467349 NP_876943.1 CDS rplW NC_005043.1 725917 726252 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(725917..726252) Chlamydophila pneumoniae TW-183 1467350 NP_876944.1 CDS rplD NC_005043.1 726269 726943 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(726269..726943) Chlamydophila pneumoniae TW-183 1467351 NP_876945.2 CDS rplC NC_005043.1 726976 727635 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(726976..727635) Chlamydophila pneumoniae TW-183 1467352 NP_876946.1 CDS CpB0674 NC_005043.1 727924 728925 R similar to hypothetical protein - Chlamydia trachomatis; hypothetical protein complement(727924..728925) Chlamydophila pneumoniae TW-183 1467353 NP_876947.1 CDS fmt NC_005043.1 729029 729994 R modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase complement(729029..729994) Chlamydophila pneumoniae TW-183 1467354 NP_876948.1 CDS CpB0676 NC_005043.1 729984 730823 R catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase complement(729984..730823) Chlamydophila pneumoniae TW-183 1467355 NP_876949.1 CDS fabZ NC_005043.1 730836 731297 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(730836..731297) Chlamydophila pneumoniae TW-183 1467356 NP_876950.1 CDS lpxC NC_005043.1 731309 732157 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(731309..732157) Chlamydophila pneumoniae TW-183 1467357 NP_876951.1 CDS lnt NC_005043.1 732187 733812 R Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase complement(732187..733812) Chlamydophila pneumoniae TW-183 1467358 NP_876952.1 CDS CpB0680 NC_005043.1 733822 734289 R similar to palmitoyl-CoA hydrolase and cytosolic acyl coenzyme A thioester hydrolase - Rattus norvegicus; cytosolic acyl coenzyme A thioester hydrolase complement(733822..734289) Chlamydophila pneumoniae TW-183 1467359 NP_876953.1 CDS CpB0681 NC_005043.1 734420 735169 R 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon complement(734420..735169) Chlamydophila pneumoniae TW-183 1467360 NP_876954.1 CDS CpB0682 NC_005043.1 735194 735373 D hypothetical protein 735194..735373 Chlamydophila pneumoniae TW-183 1467361 NP_876955.1 CDS CpB0683 NC_005043.1 735370 735705 R ATPase or kinase; similar to probable (ATPase or kinase) - Chlamydia trachomatis; hypothetical protein complement(735370..735705) Chlamydophila pneumoniae TW-183 1467362 NP_876956.1 CDS CpB0684 NC_005043.1 735774 736490 R similar to hypothetical protein CT538 - Chlamydia trachomatis; hypothetical protein complement(735774..736490) Chlamydophila pneumoniae TW-183 1467363 NP_876957.1 CDS CpB0685 NC_005043.1 736855 737163 D similar to thioredoxin family; thioredoxin 736855..737163 Chlamydophila pneumoniae TW-183 1467364 NP_876958.1 CDS CpB0686 NC_005043.1 737179 737649 R similar to probable rRNA methylase family; rRNA methylase complement(737179..737649) Chlamydophila pneumoniae TW-183 1467365 NP_876959.1 CDS CpB0687 NC_005043.1 737646 738422 R similar to mip protein family; MIP protein complement(737646..738422) Chlamydophila pneumoniae TW-183 1467366 NP_876960.1 CDS aspS NC_005043.1 738491 740245 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(738491..740245) Chlamydophila pneumoniae TW-183 1467367 NP_876961.1 CDS hisS NC_005043.1 740220 741512 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(740220..741512) Chlamydophila pneumoniae TW-183 1467368 NP_876962.1 CDS CpB0690 NC_005043.1 741876 742079 R hypothetical protein complement(741876..742079) Chlamydophila pneumoniae TW-183 1467369 NP_876963.1 CDS uhpC NC_005043.1 742323 743690 D similar to hexose phosphate transport system regulatory protein uhpC - Salmonella typhimurium; hexose phosphate transport system regulatory protein 742323..743690 Chlamydophila pneumoniae TW-183 1467370 NP_876964.1 CDS dnaE NC_005043.1 743710 747432 D catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 743710..747432 Chlamydophila pneumoniae TW-183 1467371 NP_876965.1 CDS CpB0693 NC_005043.1 747496 748380 R similar to probable OMP - Chlamydia trachomatis; hypothetical protein complement(747496..748380) Chlamydophila pneumoniae TW-183 1467372 NP_876966.1 CDS CpB0694 NC_005043.1 748531 749487 D similar to hypothetical protein CT547 - Chlamydia trachomatis; hypothetical protein 748531..749487 Chlamydophila pneumoniae TW-183 1467373 NP_876967.1 CDS CpB0695 NC_005043.1 749501 750100 D similar to hypothetical protein CT548 - Chlamydia trachomatis; hypothetical protein 749501..750100 Chlamydophila pneumoniae TW-183 1467374 NP_876968.1 CDS CpB0696 NC_005043.1 750069 750521 D similar to probable sigma regulatory factor-histidine kinase - Chlamydia trachomatis; sigma regulatory factor-histidine kinase 750069..750521 Chlamydophila pneumoniae TW-183 1467375 NP_876969.1 CDS CpB0697 NC_005043.1 750524 750952 R similar to hypothetical protein CT550 - Chlamydia trachomatis; hypothetical protein complement(750524..750952) Chlamydophila pneumoniae TW-183 1467376 NP_876970.1 CDS dacB NC_005043.1 751063 752373 D similar to serine-type D-Ala-D-Ala carboxypeptidase dacB family; serine-type D-Ala-D-Ala carboxypeptidase 751063..752373 Chlamydophila pneumoniae TW-183 1467377 NP_876971.1 CDS CpB0699 NC_005043.1 752445 752624 D hypothetical protein 752445..752624 Chlamydophila pneumoniae TW-183 1467378 NP_876972.1 CDS CpB0700 NC_005043.1 752609 752788 D similar to hypothetical protein CT552 - Chlamydia trachomatis; hypothetical protein 752609..752788 Chlamydophila pneumoniae TW-183 1467379 NP_876973.1 CDS CpB0701 NC_005043.1 752896 753990 R similar to fmu methyltransferase - Escherichia coli; fmu methyltransferase complement(752896..753990) Chlamydophila pneumoniae TW-183 1467380 NP_876974.1 CDS CpB0702 NC_005043.1 754087 755241 R similar to hypothetical protein CT696 - Chlamydia trachomatis; hypothetical protein complement(754087..755241) Chlamydophila pneumoniae TW-183 1467381 NP_876975.1 CDS CpB0703 NC_005043.1 755370 756539 R similar to hypothetical protein CT695 - Chlamydia trachomatis; hypothetical protein complement(755370..756539) Chlamydophila pneumoniae TW-183 1467382 NP_876976.1 CDS CpB0704 NC_005043.1 756575 757723 R similar to hypothetical ywbM protein - Bacillus subtilis; hypothetical protein complement(756575..757723) Chlamydophila pneumoniae TW-183 1467383 NP_876977.1 CDS CpB0705 NC_005043.1 758001 758525 R hypothetical protein complement(758001..758525) Chlamydophila pneumoniae TW-183 1467384 NP_876978.1 CDS pgk NC_005043.1 759044 760252 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(759044..760252) Chlamydophila pneumoniae TW-183 1467385 NP_876979.1 CDS CpB0707 NC_005043.1 760290 761570 R similar to phosphate permease family; phosphate permease complement(760290..761570) Chlamydophila pneumoniae TW-183 1467386 NP_876980.1 CDS CpB0708 NC_005043.1 761577 762251 R similar to hypothetical protein CT691 - Chlamydia trachomatis; hypothetical protein complement(761577..762251) Chlamydophila pneumoniae TW-183 1467387 NP_876981.1 CDS CpB0709 NC_005043.1 762306 763280 D similar to dipeptide ABC transporter, ATP-binding protein family; dipeptide ABC transporter, ATP-binding protein 762306..763280 Chlamydophila pneumoniae TW-183 1467388 NP_876982.1 CDS dppF NC_005043.1 763270 764244 D similar to dipeptide transport protein dppF - Escherichia coli; dipeptide transport protein 763270..764244 Chlamydophila pneumoniae TW-183 1467389 NP_876983.1 CDS CpB0712 NC_005043.1 764316 764519 D hypothetical protein 764316..764519 Chlamydophila pneumoniae TW-183 1467390 NP_876984.1 CDS spoOJ NC_005043.1 764500 765360 R similar to Soj antagonist, chromosome positioning and transport protein spo0J - Bacillus subtilis; Soj antagonist complement(764500..765360) Chlamydophila pneumoniae TW-183 1467391 NP_876985.1 CDS CpB0713 NC_005043.1 765495 765683 R hypothetical protein complement(765495..765683) Chlamydophila pneumoniae TW-183 1467392 NP_876986.1 CDS CpB0714 NC_005043.1 765886 766539 D similar to hypothetical protein CT482 - Chlamydia trachomatis; hypothetical protein 765886..766539 Chlamydophila pneumoniae TW-183 1467393 NP_876987.1 CDS CpB0715 NC_005043.1 766848 767462 D similar to hypothetical protein CT481 - Chlamydia trachomatis; hypothetical protein 766848..767462 Chlamydophila pneumoniae TW-183 1467394 NP_876988.1 CDS CpB0716 NC_005043.1 767506 768726 R similar to probable nifS-related protein - Chlamydia trachomatis; NifS-related protein complement(767506..768726) Chlamydophila pneumoniae TW-183 1467395 NP_876989.1 CDS CpB0717 NC_005043.1 768755 770020 R similar to probable ABC transporter membrane protein - Chlamydia trachomatis; ABC transporter membrane protein complement(768755..770020) Chlamydophila pneumoniae TW-183 1467396 NP_876990.1 CDS CpB0718 NC_005043.1 770004 770774 R similar to ABC transporter ATPase family; ABC transporter ATPase complement(770004..770774) Chlamydophila pneumoniae TW-183 1467397 NP_876991.1 CDS CpB0719 NC_005043.1 770780 772234 R with SufCD activates cysteine desulfurase SufS; cysteine desulfurase complement(770780..772234) Chlamydophila pneumoniae TW-183 1467398 NP_876992.1 CDS CpB0720 NC_005043.1 772559 773578 R similar to UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase - Rattus norvegicus; UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase complement(772559..773578) Chlamydophila pneumoniae TW-183 1467399 NP_876993.1 CDS CpB0721 NC_005043.1 773649 776921 R similar to penicillin-binding protein 2 - Escherichia coli; penicillin-binding protein 2 complement(773649..776921) Chlamydophila pneumoniae TW-183 1467400 NP_876994.1 CDS CpB0722 NC_005043.1 777538 778707 D major outer membrane protein 777538..778707 Chlamydophila pneumoniae TW-183 1467401 NP_876995.1 CDS rpsB NC_005043.1 779091 779924 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 779091..779924 Chlamydophila pneumoniae TW-183 1467402 NP_876996.1 CDS tsf NC_005043.1 779924 780772 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 779924..780772 Chlamydophila pneumoniae TW-183 1467403 NP_876997.1 CDS pyrH NC_005043.1 780780 781526 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 780780..781526 Chlamydophila pneumoniae TW-183 1467404 NP_876998.1 CDS frr NC_005043.1 781504 782046 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 781504..782046 Chlamydophila pneumoniae TW-183 1467405 NP_876999.1 CDS CpB0727 NC_005043.1 782419 782934 D similar to hypothetical protein CT676 - Chlamydia trachomatis; hypothetical protein 782419..782934 Chlamydophila pneumoniae TW-183 1467406 NP_877000.1 CDS CpB0728 NC_005043.1 782921 783997 D similar to arginine kinase - Limulus polyphemus; ATP:guanido phosphotransferase 782921..783997 Chlamydophila pneumoniae TW-183 1467407 NP_877001.1 CDS CpB0729 NC_005043.1 784248 787007 R similar to outer membrane secretion protein Q - Pseudomonas alcaligenes; outer membrane secretion protein Q complement(784248..787007) Chlamydophila pneumoniae TW-183 1467408 NP_877002.1 CDS CpB0730 NC_005043.1 787004 788512 R similar to serine/threonine-protein kinase family; serine/threonine-protein kinase complement(787004..788512) Chlamydophila pneumoniae TW-183 1467409 NP_877003.1 CDS fliN NC_005043.1 788528 789643 R similar to flagellar motor switch protein fliN - Escherichia coli; type III secretion system protein complement(788528..789643) Chlamydophila pneumoniae TW-183 1467410 NP_877004.1 CDS CpB0732 NC_005043.1 789653 790495 R similar to hypothetical protein CT671 - Chlamydia trachomatis; hypothetical protein complement(789653..790495) Chlamydophila pneumoniae TW-183 1467411 NP_877005.1 CDS CpB0733 NC_005043.1 790499 791005 R similar to hypothetical protein CT670 - Chlamydia trachomatis; hypothetical protein complement(790499..791005) Chlamydophila pneumoniae TW-183 1467412 NP_877006.1 CDS yopN NC_005043.1 791023 792351 R flagellar-type ATPase; similar to yopN (flagellar-type ATPase) proteins; type III secretion system ATPase complement(791023..792351) Chlamydophila pneumoniae TW-183 1467413 NP_877007.1 CDS CpB0735 NC_005043.1 792353 793027 R similar to hypothetical protein CT668 - Chlamydia trachomatis; hypothetical protein complement(792353..793027) Chlamydophila pneumoniae TW-183 1467414 NP_877008.1 CDS CpB0736 NC_005043.1 793061 793510 R similar to hypothetical protein CT667 - Chlamydia trachomatis; hypothetical protein complement(793061..793510) Chlamydophila pneumoniae TW-183 1467415 NP_877009.1 CDS CpB0737 NC_005043.1 793529 793783 R similar to hypothetical protein CT666 - Chlamydia trachomatis; hypothetical protein complement(793529..793783) Chlamydophila pneumoniae TW-183 1467416 NP_877010.1 CDS CpB0738 NC_005043.1 793805 794092 R similar to hypothetical protein CT665 - Chlamydia trachomatis; hypothetical protein complement(793805..794092) Chlamydophila pneumoniae TW-183 1467417 NP_877011.1 CDS CpB0739 NC_005043.1 794100 796622 R Forkhead domain protein; forkhead domain-containing protein complement(794100..796622) Chlamydophila pneumoniae TW-183 1467418 NP_877012.1 CDS CpB0740 NC_005043.1 796636 797043 R similar to hypothetical protein CT663 - Chlamydia trachomatis; hypothetical protein complement(796636..797043) Chlamydophila pneumoniae TW-183 1467419 NP_877013.1 CDS hemA NC_005043.1 797395 798414 R catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase complement(797395..798414) Chlamydophila pneumoniae TW-183 1467420 NP_877014.1 CDS CpB0742 NC_005043.1 798694 798912 R hypothetical protein complement(798694..798912) Chlamydophila pneumoniae TW-183 1467421 NP_877015.1 CDS CpB0743 NC_005043.1 798964 800772 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 798964..800772 Chlamydophila pneumoniae TW-183 1467422 NP_877016.1 CDS CpB0744 NC_005043.1 800776 802212 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 800776..802212 Chlamydophila pneumoniae TW-183 1467423 NP_877017.1 CDS CpB0745 NC_005043.1 802317 802616 D similar to hypothetical protein CT656 - Chlamydia trachomatis; hypothetical protein 802317..802616 Chlamydophila pneumoniae TW-183 1467424 NP_877018.1 CDS CpB0746 NC_005043.1 802616 802936 D similar to hypothetical protein CT657 - Chlamydia trachomatis; hypothetical protein 802616..802936 Chlamydophila pneumoniae TW-183 1467425 NP_877019.1 CDS CpB0747 NC_005043.1 803223 804200 D similar to ribosomal large subunit pseudouridine synthase A - Escherichia coli; ribosomal large subunit pseudouridine synthase A 803223..804200 Chlamydophila pneumoniae TW-183 1467426 NP_877020.1 CDS CpB0748 NC_005043.1 804310 804546 D similar to hypothetical protein CT659 - Chlamydia trachomatis; hypothetical protein 804310..804546 Chlamydophila pneumoniae TW-183 1467427 NP_877021.1 CDS CpB0749 NC_005043.1 804990 805799 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 804990..805799 Chlamydophila pneumoniae TW-183 1467428 NP_877022.1 CDS CpB0750 NC_005043.1 805796 806284 D similar to hypothetical protein dsk1 - Chlamydia psittaci; hypothetical protein 805796..806284 Chlamydophila pneumoniae TW-183 1467429 NP_877023.1 CDS CpB0751 NC_005043.1 806291 807013 D similar to ABC transporter family; ABC transporter 806291..807013 Chlamydophila pneumoniae TW-183 1467430 NP_877024.1 CDS CpB0752 NC_005043.1 807010 807834 R hypothetical protein complement(807010..807834) Chlamydophila pneumoniae TW-183 1467431 NP_877025.1 CDS CpB0753 NC_005043.1 807891 808118 R similar to hypothetical protein CT652.1 - Chlamydia trachomatis; hypothetical protein complement(807891..808118) Chlamydophila pneumoniae TW-183 1467432 NP_877026.1 CDS CpB0754 NC_005043.1 808184 810679 R similar to hypothetical protein CT620 - Chlamydia trachomatis; hypothetical protein complement(808184..810679) Chlamydophila pneumoniae TW-183 1467433 NP_877027.1 CDS CpB0755 NC_005043.1 810884 813502 D similar to hypothetical protein CT619 - Chlamydia trachomatis; hypothetical protein 810884..813502 Chlamydophila pneumoniae TW-183 1467434 NP_877028.1 CDS CpB0756 NC_005043.1 813829 815784 R similar to 76K protein, Chlamydia pneumoniae (AR-39); hypothetical protein complement(813829..815784) Chlamydophila pneumoniae TW-183 1467435 NP_877029.1 CDS CpB0757 NC_005043.1 815896 817164 R similar to 76K protein, Chlamydia pneumoniae (AR-39); hypothetical protein complement(815896..817164) Chlamydophila pneumoniae TW-183 1467436 NP_877030.1 CDS mviN NC_005043.1 817267 818910 R virulence factor; similar to virulence factor mviN family; hypothetical protein complement(817267..818910) Chlamydophila pneumoniae TW-183 1467437 NP_877031.1 CDS CpB0759 NC_005043.1 818894 819070 D hypothetical protein 818894..819070 Chlamydophila pneumoniae TW-183 1467438 NP_877032.1 CDS CpB0760 NC_005043.1 819405 820286 D Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 819405..820286 Chlamydophila pneumoniae TW-183 1467439 NP_877033.1 CDS rpsD NC_005043.1 820405 821034 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(820405..821034) Chlamydophila pneumoniae TW-183 1467440 NP_877034.1 CDS yceA NC_005043.1 821251 822225 D similar to yceA protein - Escherichia coli; hypothetical protein 821251..822225 Chlamydophila pneumoniae TW-183 1467441 NP_877035.1 CDS CpB0763 NC_005043.1 822306 822974 R functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase complement(822306..822974) Chlamydophila pneumoniae TW-183 1467442 NP_877036.1 CDS CpB0764 NC_005043.1 823295 824992 R similar to probable efflux protein - Chlamydia trachomatis; efflux protein complement(823295..824992) Chlamydophila pneumoniae TW-183 1467443 NP_877037.1 CDS CpB0765 NC_005043.1 824991 828065 D similar to probable exodeoxyribonuclease V, gamma - Chlamydia trachomatis; exodeoxyribonuclease V gamma 824991..828065 Chlamydophila pneumoniae TW-183 1467444 NP_877038.1 CDS CpB0767 NC_005043.1 828052 831204 D similar to exodeoxyribonuclease V 135K chain - Escherichia coli; exodeoxyribonuclease V 828052..831204 Chlamydophila pneumoniae TW-183 1467445 NP_877039.1 CDS CpB0766 NC_005043.1 831164 832177 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(831164..832177) Chlamydophila pneumoniae TW-183 1467446 NP_877040.1 CDS CpB0768 NC_005043.1 832167 833354 R catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase complement(832167..833354) Chlamydophila pneumoniae TW-183 1467447 NP_877041.1 CDS greA NC_005043.1 833488 835656 R contains N-terminal domain of unknown function fused to transcription elongation factor; GreA is necessary for efficient RNA polymerization through arresting sites; cleaves the nascent transcript and allows resumption of transcription elongation; transcript cleavage factor/unknown domain fusion protein complement(833488..835656) Chlamydophila pneumoniae TW-183 1467448 NP_877042.1 CDS CpB0770 NC_005043.1 835754 836197 D similar to hypothetical protein CT635 - Chlamydia trachomatis; hypothetical protein 835754..836197 Chlamydophila pneumoniae TW-183 1467449 NP_877043.1 CDS CpB0771 NC_005043.1 836268 837671 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 836268..837671 Chlamydophila pneumoniae TW-183 1467450 NP_877044.1 CDS CpB0772 NC_005043.1 837692 838690 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(837692..838690) Chlamydophila pneumoniae TW-183 1467451 NP_877045.1 CDS CpB0773 NC_005043.1 839045 839209 R hypothetical protein complement(839045..839209) Chlamydophila pneumoniae TW-183 1467452 NP_877046.1 CDS CpB0774 NC_005043.1 839281 840876 D similar to hypothetical protein CT632 - Chlamydia trachomatis; hypothetical protein 839281..840876 Chlamydophila pneumoniae TW-183 1467453 NP_877047.1 CDS CpB0775 NC_005043.1 840981 841235 D similar to hypothetical protein CT631 - Chlamydia trachomatis; hypothetical protein 840981..841235 Chlamydophila pneumoniae TW-183 1467454 NP_877048.1 CDS CpB0776 NC_005043.1 841440 842309 R similar to geranylgeranyl pyrophosphate synthase family; geranylgeranyl pyrophosphate synthase complement(841440..842309) Chlamydophila pneumoniae TW-183 1467455 NP_877049.1 CDS CpB0777 NC_005043.1 842325 842951 R similar to UDP-N-acetylglucosamine pyrophosphorylase - Bacillus subtilis; UDP-N-acetylglucosamine pyrophosphorylase complement(842325..842951) Chlamydophila pneumoniae TW-183 1467456 NP_877050.1 CDS tctD NC_005043.1 843026 843733 R similar to trans-activating transcription regulator tctD - Salmonella typhimurium; trans-activating transcription regulator complement(843026..843733) Chlamydophila pneumoniae TW-183 1467457 NP_877051.1 CDS CpB0779 NC_005043.1 843930 845759 D similar to hypothetical protein CT651 - Chlamydia trachomatis; hypothetical protein 843930..845759 Chlamydophila pneumoniae TW-183 1467458 NP_877052.1 CDS recD NC_005043.1 845926 847407 D similar to exonuclease V alpha-subunit recD - Escherichia coli; exonuclease V subunit alpha 845926..847407 Chlamydophila pneumoniae TW-183 1467459 NP_877053.1 CDS CpB0781 NC_005043.1 847480 848328 R similar to hypothetical protein CT618 - Chlamydia trachomatis; hypothetical protein complement(847480..848328) Chlamydophila pneumoniae TW-183 1467460 NP_877054.2 CDS rpsT NC_005043.1 848359 848658 R binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 complement(848359..848658) Chlamydophila pneumoniae TW-183 1467461 NP_877055.1 CDS CpB0783 NC_005043.1 848919 850124 D similar to hypothetical protein CT616 - Chlamydia trachomatis; hypothetical protein 848919..850124 Chlamydophila pneumoniae TW-183 1467462 NP_877056.1 CDS CpB0784 NC_005043.1 850283 852001 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; RNA polymerase sigma factor 850283..852001 Chlamydophila pneumoniae TW-183 1467463 NP_877057.1 CDS CpB0785 NC_005043.1 852055 852459 D similar to dihydroneopterin-triphosphate epimerase - Escherichia coli; dihydroneopterin-triphosphate epimerase 852055..852459 Chlamydophila pneumoniae TW-183 1467464 NP_877058.1 CDS CpB0786 NC_005043.1 852432 853784 D similar to dihydropteroate synthase - Pisum sativum; dihydropteroate synthase 852432..853784 Chlamydophila pneumoniae TW-183 1467465 NP_877059.1 CDS CpB0787 NC_005043.1 853810 854322 D similar to dihydrofolate reductase - Haemophilus influenzae; dihydrofolate reductase 853810..854322 Chlamydophila pneumoniae TW-183 1467466 NP_877060.1 CDS CpB0788 NC_005043.1 854279 855019 D similar to hypothetical protein CT611 - Chlamydia trachomatis; hypothetical protein 854279..855019 Chlamydophila pneumoniae TW-183 1467467 NP_877061.1 CDS CpB0789 NC_005043.1 855074 855700 D similar to coenzyme pyrrolo-quinoline-quinone biosynthesis protein - Acinetobacter calcoaceticus; coenzyme pyrrolo-quinoline-quinone biosynthesis protein 855074..855700 Chlamydophila pneumoniae TW-183 1467468 NP_877062.1 CDS recA NC_005043.1 855858 856919 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(855858..856919) Chlamydophila pneumoniae TW-183 1467469 NP_877063.1 CDS CpB0791 NC_005043.1 857291 857833 R similar to 5-formyltetrahydrofolate cyclo-ligase - Oryctolagus cuniculus; 5-formyltetrahydrofolate cyclo-ligase complement(857291..857833) Chlamydophila pneumoniae TW-183 1467470 NP_877064.1 CDS CpB0792 NC_005043.1 857843 859129 R similar to hypothetical protein CT648 - Chlamydia trachomatis; hypothetical protein complement(857843..859129) Chlamydophila pneumoniae TW-183 1467471 NP_877065.1 CDS CpB0793 NC_005043.1 859120 859704 R similar to transcriptional activator Trip230 protein - Homo sapiens; hypothetical protein complement(859120..859704) Chlamydophila pneumoniae TW-183 1467472 NP_877066.1 CDS CpB0794 NC_005043.1 859713 861104 R similar to hypothetical protein CT646 - Chlamydia trachomatis; hypothetical protein complement(859713..861104) Chlamydophila pneumoniae TW-183 1467473 NP_877067.1 CDS CpB0795 NC_005043.1 861206 861502 D similar to hypothetical protein CT645 - Chlamydia trachomatis; hypothetical protein 861206..861502 Chlamydophila pneumoniae TW-183 1467474 NP_877068.1 CDS nifR3 NC_005043.1 861481 862488 D similar to nitrogen regulating protein nifR3 - Rhodobacter capsulatus; nitrogen regulating protein 861481..862488 Chlamydophila pneumoniae TW-183 1467475 NP_877069.1 CDS CpB0796 NC_005043.1 862440 865055 R catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I/SWI domain fusion protein complement(862440..865055) Chlamydophila pneumoniae TW-183 1467476 NP_877070.1 CDS CpB0798 NC_005043.1 865662 866456 D similar to hypothetical protein CT642 - Chlamydia trachomatis; hypothetical protein 865662..866456 Chlamydophila pneumoniae TW-183 1467477 NP_877071.1 CDS CpB0799 NC_005043.1 866463 867785 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 complement(866463..867785) Chlamydophila pneumoniae TW-183 1467478 NP_877072.1 CDS CpB0800 NC_005043.1 867788 869707 R DNA helicase; similar to DNA helicase uvrD family; hypothetical protein complement(867788..869707) Chlamydophila pneumoniae TW-183 1467479 NP_877073.1 CDS CpB0801 NC_005043.1 869810 870520 D Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 869810..870520 Chlamydophila pneumoniae TW-183 1467480 NP_877074.1 CDS CpB0803 NC_005043.1 870505 870750 D similar to hypothetical protein CT606.1 - Chlamydia trachomatis; hypothetical protein 870505..870750 Chlamydophila pneumoniae TW-183 1467481 NP_877075.1 CDS CpB0802 NC_005043.1 870733 871353 R HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase complement(870733..871353) Chlamydophila pneumoniae TW-183 1467482 NP_877076.1 CDS CpB0804 NC_005043.1 871538 872812 D similar to hypothetical protein CT605 - Chlamydia trachomatis; hypothetical protein 871538..872812 Chlamydophila pneumoniae TW-183 1467483 NP_877077.1 CDS groEL NC_005043.1 872923 874503 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; molecular chaperone GroEL 872923..874503 Chlamydophila pneumoniae TW-183 1467484 NP_877078.1 CDS CpB0806 NC_005043.1 874827 875417 D similar to Hordeum vulgare 2-cys peroxiredoxin BAS1 precursor; thiol-specific antioxidant protein fragment; 2-cys peroxiredoxin 874827..875417 Chlamydophila pneumoniae TW-183 1467485 NP_877079.1 CDS CpB0807 NC_005043.1 875414 875803 R similar to hypothetical protein CT602 - Chlamydia trachomatis; hypothetical protein complement(875414..875803) Chlamydophila pneumoniae TW-183 1467486 NP_877080.1 CDS CpB0808 NC_005043.1 875910 876527 R invasin related protein; similar to protein p60 precursor (invasin related protein) - Listeria grayi; protein p60 precursor complement(875910..876527) Chlamydophila pneumoniae TW-183 1467487 NP_877081.1 CDS CpB0809 NC_005043.1 876517 877095 R similar to peptidoglycan-associated lipoprotein precursor - Escherichia coli; peptidoglycan-associated lipoprotein precursor complement(876517..877095) Chlamydophila pneumoniae TW-183 1467488 NP_877082.1 CDS tolB NC_005043.1 877092 878387 R forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB complement(877092..878387) Chlamydophila pneumoniae TW-183 1467489 NP_877083.1 CDS CpB0811 NC_005043.1 878419 879207 R similar to hypothetical protein CT598 - Chlamydia trachomatis; hypothetical protein complement(878419..879207) Chlamydophila pneumoniae TW-183 1467490 NP_877084.1 CDS exbD NC_005043.1 879211 879618 R biopolymer transport protein; similar to biopolymer transport exbD protein - Escherichia coli; hypothetical protein complement(879211..879618) Chlamydophila pneumoniae TW-183 1467491 NP_877085.1 CDS exbB NC_005043.1 879615 880313 R biopolymer transport protein; similar to biopolymer transport exbB protein - Escherichia coli; ExbB complement(879615..880313) Chlamydophila pneumoniae TW-183 1467492 NP_877086.1 CDS dsbD NC_005043.1 880474 882618 D similar to thiol:disulfide interchange protein dsbD - Escherichia coli; thiol:disulfide interchange protein 880474..882618 Chlamydophila pneumoniae TW-183 1467493 NP_877087.1 CDS mttC NC_005043.1 882941 883726 D similar to mttC protein - Escherichia coli; MttC 882941..883726 Chlamydophila pneumoniae TW-183 1467494 NP_877088.1 CDS CpB0816 NC_005043.1 883864 884757 D similar to succinate dehydrogenase subunit C - Bacillus macerans; succinate dehydrogenase subunit C 883864..884757 Chlamydophila pneumoniae TW-183 1467495 NP_877089.1 CDS sdhA NC_005043.1 884761 886641 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 884761..886641 Chlamydophila pneumoniae TW-183 1467496 NP_877090.1 CDS sdhB NC_005043.1 886655 887428 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 886655..887428 Chlamydophila pneumoniae TW-183 1467497 NP_877091.1 CDS CpB0819 NC_005043.1 887430 890396 R similar to hypothetical protein CT590 - Chlamydia trachomatis; hypothetical protein complement(887430..890396) Chlamydophila pneumoniae TW-183 1467498 NP_877092.1 CDS CpB0820 NC_005043.1 890427 892241 R similar to probable sigma regulatory protein-pp2c phosphatase - Chlamydia trachomatis; hypothetical protein complement(890427..892241) Chlamydophila pneumoniae TW-183 1467499 NP_877093.1 CDS rsbU NC_005043.1 892238 894145 R similar to regulator of sigma-B activity rsbU - Bacillus subtilis; hypothetical protein complement(892238..894145) Chlamydophila pneumoniae TW-183 1467500 NP_877094.1 CDS CpB0822 NC_005043.1 894151 894303 R hypothetical protein complement(894151..894303) Chlamydophila pneumoniae TW-183 1467501 NP_877095.1 CDS CpB0823 NC_005043.1 894496 895329 D hypothetical protein 894496..895329 Chlamydophila pneumoniae TW-183 1467502 NP_877096.1 CDS CpB0824 NC_005043.1 895450 896520 D hypothetical protein 895450..896520 Chlamydophila pneumoniae TW-183 1467503 NP_877097.1 CDS CpB0825 NC_005043.1 896623 898665 D hypothetical protein 896623..898665 Chlamydophila pneumoniae TW-183 1467504 NP_877098.1 CDS CpB0826 NC_005043.1 898874 900019 D hypothetical protein 898874..900019 Chlamydophila pneumoniae TW-183 1467505 NP_877099.1 CDS CpB0827 NC_005043.1 900168 901181 D hypothetical protein 900168..901181 Chlamydophila pneumoniae TW-183 1467506 NP_877100.1 CDS CpB0828 NC_005043.1 901259 902308 R hypothetical protein complement(901259..902308) Chlamydophila pneumoniae TW-183 1467507 NP_877101.1 CDS eno NC_005043.1 902568 903854 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(902568..903854) Chlamydophila pneumoniae TW-183 1467508 NP_877102.1 CDS CpB0830 NC_005043.1 904046 906019 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(904046..906019) Chlamydophila pneumoniae TW-183 1467509 NP_877103.1 CDS CpB0831 NC_005043.1 906028 907062 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(906028..907062) Chlamydophila pneumoniae TW-183 1467510 NP_877104.1 CDS CpB0832 NC_005043.1 907071 907625 R similar to hypothetical protein CT584 - Chlamydia trachomati; hypothetical protein complement(907071..907625) Chlamydophila pneumoniae TW-183 1467511 NP_877105.1 CDS CpB0833 NC_005043.1 907629 908381 R similar to plasmid virulence protein pGP6-D (ORF6) - Chlamydia trachomatis; plasmid virulence protein pGP6-D complement(907629..908381) Chlamydophila pneumoniae TW-183 1467512 NP_877106.1 CDS soj NC_005043.1 908386 909153 R similar to Spo0A activation inhibitor soj - Bacillus subtilis; Spo0A activation inhibitor complement(908386..909153) Chlamydophila pneumoniae TW-183 1467513 NP_877107.1 CDS thrS NC_005043.1 909186 911093 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(909186..911093) Chlamydophila pneumoniae TW-183 1467514 NP_877108.1 CDS CpB0836 NC_005043.1 911287 912204 D similar to hypothetical protein CT580 - Chlamydia trachomatis; hypothetical protein 911287..912204 Chlamydophila pneumoniae TW-183 1467515 NP_877109.1 CDS CpB0837 NC_005043.1 912275 913609 R similar to hypothetical protein CT579 - Chlamydia trachomatis; hypothetical protein complement(912275..913609) Chlamydophila pneumoniae TW-183 1467516 NP_877110.1 CDS CpB0838 NC_005043.1 913642 915108 R similar to hypothetical protein CT578 - Chlamydia trachomatis; hypothetical protein complement(913642..915108) Chlamydophila pneumoniae TW-183 1467517 NP_877111.1 CDS CpB0839 NC_005043.1 915145 915507 R similar to hypothetical protein CT577 - Chlamydia trachomatis; hypothetical protein complement(915145..915507) Chlamydophila pneumoniae TW-183 1467518 NP_877112.1 CDS lcrH NC_005043.1 915528 916223 R regulatory protein; similar to regulatory protein LcrH - Yersinia pestis; LcrH complement(915528..916223) Chlamydophila pneumoniae TW-183 1467519 NP_877113.1 CDS mutL NC_005043.1 916446 918188 D This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 916446..918188 Chlamydophila pneumoniae TW-183 1467520 NP_877114.1 CDS CpB0842 NC_005043.1 918193 919260 D similar to X-Pro aminopeptidase family; X-Pro aminopeptidase 918193..919260 Chlamydophila pneumoniae TW-183 1467521 NP_877115.1 CDS CpB0843 NC_005043.1 919406 920683 D similar to hypothetical protein CT573 - Chlamydia trachomatis; hypothetical protein 919406..920683 Chlamydophila pneumoniae TW-183 1467522 NP_877116.1 CDS CpB0844 NC_005043.1 920684 922948 D similar to general secretion pathway protein D precursor - Aeromonas hydrophila; general secretion pathway protein D precursor 920684..922948 Chlamydophila pneumoniae TW-183 1467523 NP_877117.1 CDS xcpR NC_005043.1 922938 924428 D secretion protein; similar to secretion protein xcpR - Pseudomonas aeruginosa; XcpR 922938..924428 Chlamydophila pneumoniae TW-183 1467524 NP_877118.1 CDS CpB0846 NC_005043.1 924438 925613 D secretion protein; similar to secretion protein xcpS - Pseudomonas alcaligenes; XcpS 924438..925613 Chlamydophila pneumoniae TW-183 1467525 NP_877119.1 CDS CpB0847 NC_005043.1 925637 926008 D similar to general secretion pathway protein g precursor - Vibrio cholerae; general secretion pathway protein g precursor 925637..926008 Chlamydophila pneumoniae TW-183 1467526 NP_877120.1 CDS CpB0848 NC_005043.1 926012 926458 D similar to hypothetical protein CT568 - Chlamydia trachomatis; hypothetical protein 926012..926458 Chlamydophila pneumoniae TW-183 1467527 NP_877121.1 CDS CpB0849 NC_005043.1 926443 926985 D similar to hypothetical protein CT567 - Chlamydia trachomatis; hypothetical protein 926443..926985 Chlamydophila pneumoniae TW-183 1467528 NP_877122.1 CDS CpB0850 NC_005043.1 926969 927994 D similar to hypothetical protein CT566 - Chlamydia trachomatis; hypothetical protein 926969..927994 Chlamydophila pneumoniae TW-183 1467529 NP_877123.1 CDS CpB0851 NC_005043.1 928028 928555 D similar to hypothetical protein CT565 - Chlamydia trachomatis; hypothetical protein 928028..928555 Chlamydophila pneumoniae TW-183 1467530 NP_877124.1 CDS CpB0852 NC_005043.1 928821 929690 R similar to YOP proteins translocation protein T - Yersinia pestis; YOP proteins translocation protein T complement(928821..929690) Chlamydophila pneumoniae TW-183 1467531 NP_877125.1 CDS CpB0853 NC_005043.1 929698 929985 R similar to YOP proteins translocation protein S - Yersinia pestis; translocation protein S complement(929698..929985) Chlamydophila pneumoniae TW-183 1467532 NP_877126.1 CDS yscR NC_005043.1 929997 930917 R secretion protein; similar to yscR secretion protein - Yersinia pestis; type III secretion system protein complement(929997..930917) Chlamydophila pneumoniae TW-183 1467533 NP_877127.1 CDS CpB0855 NC_005043.1 930932 931633 R similar to YOP proteins translocation protein L - Yersinia pseudotuberculosis; type III secretion system protein complement(930932..931633) Chlamydophila pneumoniae TW-183 1467534 NP_877128.1 CDS CpB0856 NC_005043.1 931754 932587 R similar to hypothetical protein CT560 - Chlamydia trachomatis; hypothetical protein complement(931754..932587) Chlamydophila pneumoniae TW-183 1467535 NP_877129.1 CDS CpB0857 NC_005043.1 932587 933594 R similar to secretion protein family; secretion protein complement(932587..933594) Chlamydophila pneumoniae TW-183 1467536 NP_877130.1 CDS CpB0858 NC_005043.1 934067 934624 D hypothetical protein 934067..934624 Chlamydophila pneumoniae TW-183 1467537 NP_877131.1 CDS CpB0859 NC_005043.1 934767 935285 D hypothetical protein 934767..935285 Chlamydophila pneumoniae TW-183 1467538 NP_877132.1 CDS CpB0860 NC_005043.1 935590 935760 D hypothetical protein 935590..935760 Chlamydophila pneumoniae TW-183 1467539 NP_877133.1 CDS CpB0861 NC_005043.1 936147 937070 R catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase complement(936147..937070) Chlamydophila pneumoniae TW-183 1467540 NP_877134.1 CDS CpB0862 NC_005043.1 937067 938452 R E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase complement(937067..938452) Chlamydophila pneumoniae TW-183 1467541 NP_877135.1 CDS CpB0863 NC_005043.1 938876 939340 D similar to hypothetical protein CT556 - Chlamydia trachomatis; hypothetical protein 938876..939340 Chlamydophila pneumoniae TW-183 1467542 NP_877136.1 CDS CpB0864 NC_005043.1 939365 943012 R similar to SNF protein - Bacillus cereus; SNF protein complement(939365..943012) Chlamydophila pneumoniae TW-183 1467543 NP_877137.1 CDS brnQ NC_005043.1 943042 944280 R similar to branched-chain amino acid transporter brnQ - Bacillus subtilis; branched-chain amino acid transporter complement(943042..944280) Chlamydophila pneumoniae TW-183 1467544 NP_877138.1 CDS CpB0866 NC_005043.1 944465 945094 R similar to endonuclease III (DNA repair) - Bacillus subtilis; endonuclease III complement(944465..945094) Chlamydophila pneumoniae TW-183 1467545 NP_877139.1 CDS trmE NC_005043.1 945101 946429 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(945101..946429) Chlamydophila pneumoniae TW-183 1467546 NP_877140.1 CDS CpB0868 NC_005043.1 946580 947485 D catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 946580..947485 Chlamydophila pneumoniae TW-183 1467547 NP_877141.1 CDS CpB0869 NC_005043.1 947545 948870 D similar to hypothetical protein CT700 - Chlamydia trachomatis; hypothetical protein 947545..948870 Chlamydophila pneumoniae TW-183 1467548 NP_877142.1 CDS secA NC_005043.1 949054 951966 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 949054..951966 Chlamydophila pneumoniae TW-183 1467549 NP_877143.1 CDS CpB0872 NC_005043.1 952136 952333 D hypothetical protein 952136..952333 Chlamydophila pneumoniae TW-183 1467550 NP_877144.1 CDS CpB0871 NC_005043.1 952314 952514 R similar to hypothetical protein CT702 - Chlamydia trachomatis; hypothetical protein complement(952314..952514) Chlamydophila pneumoniae TW-183 1467551 NP_877145.1 CDS engA NC_005043.1 952590 954053 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(952590..954053) Chlamydophila pneumoniae TW-183 1467552 NP_877146.1 CDS CpB0874 NC_005043.1 954170 955402 R similar to poly(A) polymerase - Bacillus subtilis; poly(A) polymerase complement(954170..955402) Chlamydophila pneumoniae TW-183 1467553 NP_877147.1 CDS clpX NC_005043.1 955432 956697 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(955432..956697) Chlamydophila pneumoniae TW-183 1467554 NP_877148.1 CDS clpP NC_005043.1 956707 957318 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(956707..957318) Chlamydophila pneumoniae TW-183 1467555 NP_877149.1 CDS tig NC_005043.1 957497 958825 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(957497..958825) Chlamydophila pneumoniae TW-183 1467556 NP_877150.1 CDS CpB0878 NC_005043.1 959111 962611 D similar to swf/snf helicase family; swf/snf helicase 959111..962611 Chlamydophila pneumoniae TW-183 1467557 NP_877151.1 CDS CpB0879 NC_005043.1 962616 963716 D similar to rod shape-determining protein - Bacillus subtilis; rod shape-determining protein MreB 962616..963716 Chlamydophila pneumoniae TW-183 1467558 NP_877152.1 CDS CpB0880 NC_005043.1 963719 965521 D catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 963719..965521 Chlamydophila pneumoniae TW-183 1467559 NP_877153.1 CDS CpB0881 NC_005043.1 965639 967939 D similar to hypothetical protein CT711 - Chlamydia trachomatis; hypothetical protein 965639..967939 Chlamydophila pneumoniae TW-183 1467560 NP_877154.1 CDS CpB0882 NC_005043.1 967960 969129 D similar to hypothetical protein CT712 - Chlamydia trachomatis; hypothetical protein 967960..969129 Chlamydophila pneumoniae TW-183 1467561 NP_877155.1 CDS CpB0883 NC_005043.1 969126 970148 R similar to major outer membrane protein - Chlamydia trachomatis; major outer membrane protein complement(969126..970148) Chlamydophila pneumoniae TW-183 1467562 NP_877156.1 CDS gpsA NC_005043.1 970314 971318 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(970314..971318) Chlamydophila pneumoniae TW-183 1467563 NP_877157.1 CDS CpB0885 NC_005043.1 971315 972700 R similar to UDP-N-acetylglucosamine pyrophosphorylase - Homo sapiens; UDP-N-acetylglucosamine pyrophosphorylase complement(971315..972700) Chlamydophila pneumoniae TW-183 1467564 NP_877158.1 CDS CpB0886 NC_005043.1 972712 973080 R similar to hypothetical protein CT716 - Chlamydia trachomatis; hypothetical protein complement(972712..973080) Chlamydophila pneumoniae TW-183 1467565 NP_877159.1 CDS CpB0887 NC_005043.1 973077 974378 R FliI; involved in type III protein export; type III secretion system ATPase complement(973077..974378) Chlamydophila pneumoniae TW-183 1467566 NP_877160.1 CDS CpB0888 NC_005043.1 974375 974911 R similar to hypothetical protein CT718 - Chlamydia trachomatis; hypothetical protein complement(974375..974911) Chlamydophila pneumoniae TW-183 1467567 NP_877161.1 CDS CpB0889 NC_005043.1 974928 975953 R similar to flagellar motor switch protein - Treponema denticola; type III secretion system protein complement(974928..975953) Chlamydophila pneumoniae TW-183 1467568 NP_877162.1 CDS CpB0890 NC_005043.1 976245 977045 R similar to nifU-like protein - Helicobacter pylori; NifU-like protein complement(976245..977045) Chlamydophila pneumoniae TW-183 1467569 NP_877163.1 CDS nifS NC_005043.1 977042 978196 R similar to nitrogen fixation protein nifS - Anabaena sp.; nitrogen fixation protein complement(977042..978196) Chlamydophila pneumoniae TW-183 1467570 NP_877164.1 CDS CpB0892 NC_005043.1 978151 978837 R catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase complement(978151..978837) Chlamydophila pneumoniae TW-183 1467571 NP_877165.1 CDS CpB0893 NC_005043.1 978993 979700 D similar to probable pseudouridine synthase - Chlamydia trachomatis; pseudouridine synthase 978993..979700 Chlamydophila pneumoniae TW-183 1467572 NP_877166.1 CDS CpB0895 NC_005043.1 979741 980268 D similar to hypothetical protein CT724 - Chlamydia trachomatis; hypothetical protein 979741..980268 Chlamydophila pneumoniae TW-183 1467573 NP_877167.1 CDS birA NC_005043.1 980236 980814 R catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase complement(980236..980814) Chlamydophila pneumoniae TW-183 1467574 NP_877168.1 CDS CpB0896 NC_005043.1 980746 981993 D similar to stage V sporulation protein E - Bacillus subtilis; stage V sporulation protein E 980746..981993 Chlamydophila pneumoniae TW-183 1467575 NP_877169.1 CDS copA NC_005043.1 981990 983966 R similar to copper-transporting ATPase copA - Enterococcus hirae; copper-transporting ATPase complement(981990..983966) Chlamydophila pneumoniae TW-183 1467576 NP_877170.1 CDS CpB0898 NC_005043.1 983978 984724 R similar to hypothetical protein CT728 - Chlamydia trachomatis; hypothetical protein complement(983978..984724) Chlamydophila pneumoniae TW-183 1467577 NP_877171.1 CDS CpB0899 NC_005043.1 984768 986051 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(984768..986051) Chlamydophila pneumoniae TW-183 1467578 NP_877172.1 CDS CpB0900 NC_005043.1 986095 987225 D similar to riboflavin-specific deaminase - Escherichia coli; riboflavin-specific deaminase 986095..987225 Chlamydophila pneumoniae TW-183 1467579 NP_877173.1 CDS CpB0901 NC_005043.1 987286 988542 D bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 987286..988542 Chlamydophila pneumoniae TW-183 1467580 NP_877174.1 CDS ribH NC_005043.1 988565 989020 D RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 988565..989020 Chlamydophila pneumoniae TW-183 1467581 NP_877175.1 CDS CpB0903 NC_005043.1 989069 990430 R similar to hypothetical protein CT733 - Chlamydia trachomatis; hypothetical protein complement(989069..990430) Chlamydophila pneumoniae TW-183 1467582 NP_877176.1 CDS CpB0904 NC_005043.1 990695 991348 D similar to hypothetical protein CT734 - Chlamydia trachomatis; hypothetical protein 990695..991348 Chlamydophila pneumoniae TW-183 1467583 NP_877177.1 CDS CpB0905 NC_005043.1 991467 992843 D similar to D-alanine/glycine transport protein, sodium-dependent - Alteromonas haloplanktis; D-alanine/glycine transport protein, sodium-dependent 991467..992843 Chlamydophila pneumoniae TW-183 1467584 NP_877178.1 CDS CpB0906 NC_005043.1 992856 993308 D similar to hypothetical protein ybcL - Chlamydia trachomatis; hypothetical protein 992856..993308 Chlamydophila pneumoniae TW-183 1467585 NP_877179.1 CDS CpB0907 NC_005043.1 993312 993977 R similar to probable set domain protein - Chlamydia trachomatis; SET domain-containing protein complement(993312..993977) Chlamydophila pneumoniae TW-183 1467586 NP_877180.1 CDS CpB0908 NC_005043.1 993965 994762 R similar to probable metal dependent hydrolase - Chlamydia trachomatis; metal dependent hydrolase complement(993965..994762) Chlamydophila pneumoniae TW-183 1467587 NP_877181.1 CDS CpB0909 NC_005043.1 994764 997184 R similar to DNA translocase spoIIIE - Bacillus subtilis; DNA translocase SpoIIIE complement(994764..997184) Chlamydophila pneumoniae TW-183 1467588 NP_877182.1 CDS CpB0910 NC_005043.1 1003107 1003535 D hypothetical protein 1003107..1003535 Chlamydophila pneumoniae TW-183 1467589 NP_877183.1 CDS CpB0911 NC_005043.1 1003591 1004730 D hypothetical protein 1003591..1004730 Chlamydophila pneumoniae TW-183 1467590 NP_877184.1 CDS CpB0912 NC_005043.1 1004893 1006188 R uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F complement(1004893..1006188) Chlamydophila pneumoniae TW-183 1467591 NP_877185.1 CDS yajC NC_005043.1 1006329 1006682 R member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC complement(1006329..1006682) Chlamydophila pneumoniae TW-183 1467592 NP_877186.1 CDS CpB0914 NC_005043.1 1006753 1007958 R similar to protein Hom1 - Chlamydia trachomatis; protein Hom1 complement(1006753..1007958) Chlamydophila pneumoniae TW-183 1467593 NP_877187.1 CDS CpB0915 NC_005043.1 1008045 1008206 D hypothetical protein 1008045..1008206 Chlamydophila pneumoniae TW-183 1467594 NP_877188.1 CDS CpB0916 NC_005043.1 1008228 1008572 R similar to histone H1-like protein - Chlamydia psittaci; histone H1-like protein complement(1008228..1008572) Chlamydophila pneumoniae TW-183 1467595 NP_877189.1 CDS CpB0917 NC_005043.1 1008777 1008995 D hypothetical protein 1008777..1008995 Chlamydophila pneumoniae TW-183 1467596 NP_877190.1 CDS CpB0919 NC_005043.1 1009015 1011483 D similar to probable chltr phosphoprotein - Chlamydia trachomatis; chltr phosphoprotein 1009015..1011483 Chlamydophila pneumoniae TW-183 1467597 NP_877191.1 CDS CpB0918 NC_005043.1 1011439 1012746 R catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX; protoporphyrinogen oxidase complement(1011439..1012746) Chlamydophila pneumoniae TW-183 1467598 NP_877192.1 CDS CpB0920 NC_005043.1 1012782 1014158 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(1012782..1014158) Chlamydophila pneumoniae TW-183 1467599 NP_877193.1 CDS hemE NC_005043.1 1014139 1015128 R catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase complement(1014139..1015128) Chlamydophila pneumoniae TW-183 1467600 NP_877194.1 CDS CpB0922 NC_005043.1 1015139 1018396 R similar to transcription-repair coupling factor - Listeria monocytogenes; transcription-repair coupling factor complement(1015139..1018396) Chlamydophila pneumoniae TW-183 1467601 NP_877195.1 CDS alaS NC_005043.1 1018366 1020984 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(1018366..1020984) Chlamydophila pneumoniae TW-183 1467602 NP_877196.1 CDS CpB0924 NC_005043.1 1021163 1023214 D catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 1021163..1023214 Chlamydophila pneumoniae TW-183 1467603 NP_877197.1 CDS CpB0925 NC_005043.1 1023208 1024089 R Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase complement(1023208..1024089) Chlamydophila pneumoniae TW-183 1467604 NP_877198.1 CDS CpB0926 NC_005043.1 1024311 1024883 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 1024311..1024883 Chlamydophila pneumoniae TW-183 1467605 NP_877199.1 CDS CpB0927 NC_005043.1 1024918 1025148 D similar to hypothetical protein CT753 - Chlamydia trachomatis; hypothetical protein 1024918..1025148 Chlamydophila pneumoniae TW-183 1467606 NP_877200.1 CDS cpdA NC_005043.1 1025173 1026060 R similar to 3,5'-cyclic-nucleotide phosphodiesterase cpdA - Escherichia coli'; 3',5'-cyclic-nucleotide phosphodiesterase complement(1025173..1026060) Chlamydophila pneumoniae TW-183 1467607 NP_877201.1 CDS CpB0929 NC_005043.1 1026224 1027783 R similar to chaperonin HSP60 - Clostridium perfringens; chaperonin HSP60 complement(1026224..1027783) Chlamydophila pneumoniae TW-183 1467608 NP_877202.1 CDS CpB0930 NC_005043.1 1027937 1028152 D hypothetical protein 1027937..1028152 Chlamydophila pneumoniae TW-183 1467609 NP_877203.1 CDS CpB0931 NC_005043.1 1028198 1029541 D similar to UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase - Synechocystis sp.; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase 1028198..1029541 Chlamydophila pneumoniae TW-183 1467610 NP_877204.1 CDS mraY NC_005043.1 1029558 1030607 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1029558..1030607 Chlamydophila pneumoniae TW-183 1467611 NP_877205.1 CDS murD NC_005043.1 1030610 1031863 D UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 1030610..1031863 Chlamydophila pneumoniae TW-183 1467612 NP_877206.1 CDS lytE NC_005043.1 1031866 1032567 D similar to cell wall hydrolase lytE - Bacillus subtilis; cell wall hydrolase 1031866..1032567 Chlamydophila pneumoniae TW-183 1467613 NP_877207.1 CDS CpB0935 NC_005043.1 1032586 1033743 D similar to stage V sporulation protein E - Bacillus subtilis; stage V sporulation protein E 1032586..1033743 Chlamydophila pneumoniae TW-183 1467614 NP_877208.1 CDS murG NC_005043.1 1033652 1034722 D UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1033652..1034722 Chlamydophila pneumoniae TW-183 1467615 NP_877209.1 CDS CpB0937 NC_005043.1 1034732 1037161 D catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine and catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase 1034732..1037161 Chlamydophila pneumoniae TW-183 1467616 NP_877210.1 CDS CpB0938 NC_005043.1 1037235 1037813 R similar to hypothetical protein CT763 - Chlamydia trachomati; hypothetical protein complement(1037235..1037813) Chlamydophila pneumoniae TW-183 1467617 NP_877211.1 CDS cutA1 NC_005043.1 1037765 1038103 R similar to divalent cation tolerance protein cutA1 - Escherichia coli; divalent cation tolerance protein complement(1037765..1038103) Chlamydophila pneumoniae TW-183 1467618 NP_877212.1 CDS CpB0940 NC_005043.1 1038100 1038885 R similar to hypothetical protein CT764 - Chlamydia trachomatis; hypothetical protein complement(1038100..1038885) Chlamydophila pneumoniae TW-183 1467619 NP_877213.1 CDS CpB0941 NC_005043.1 1038945 1039292 D similar to sigma-F 5-region regulatory protein spoIIAA - Bacillus subtilis; sigma-F 5-region regulatory protein SpoIIAA 1038945..1039292 Chlamydophila pneumoniae TW-183 1467620 NP_877214.1 CDS miaA NC_005043.1 1039302 1040330 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 1039302..1040330 Chlamydophila pneumoniae TW-183 1467621 NP_877215.1 CDS CpB0942 NC_005043.1 1040305 1041366 R similar to hypothetical protein HP0656 - Helicobacter pylori; hypothetical protein complement(1040305..1041366) Chlamydophila pneumoniae TW-183 1467622 NP_877216.1 CDS CpB0944 NC_005043.1 1041452 1043113 D similar to hypothetical protein CT768 - Chlamydia trachomatis; hypothetical protein 1041452..1043113 Chlamydophila pneumoniae TW-183 1467623 NP_877217.1 CDS CpB0945 NC_005043.1 1043110 1043298 D hypothetical protein 1043110..1043298 Chlamydophila pneumoniae TW-183 1467624 NP_877218.1 CDS CpB0946 NC_005043.1 1043349 1043750 D hypothetical protein 1043349..1043750 Chlamydophila pneumoniae TW-183 1467625 NP_877219.1 CDS CpB0947 NC_005043.1 1043811 1044170 D similar to iojap gene - Zea mays; Iojap 1043811..1044170 Chlamydophila pneumoniae TW-183 1467626 NP_877220.1 CDS CpB0948 NC_005043.1 1044187 1045437 D FabF, beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-ACP synthase 1044187..1045437 Chlamydophila pneumoniae TW-183 1467627 NP_877221.1 CDS CpB0949 NC_005043.1 1045440 1045892 D AP4A Hydrolase; similar to diadenosine tetraphosphatase (AP4A Hydrolase) - Pyrobaculum aerophilum; diadenosine tetraphosphatase 1045440..1045892 Chlamydophila pneumoniae TW-183 1467628 NP_877222.1 CDS CpB0950 NC_005043.1 1045926 1046573 R catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase complement(1045926..1046573) Chlamydophila pneumoniae TW-183 1467629 NP_877223.1 CDS CpB0951 NC_005043.1 1046728 1047783 D similar to leucine dehydrogenase - Bacillus stearothermophilus; leucine dehydrogenase 1046728..1047783 Chlamydophila pneumoniae TW-183 1467630 NP_877224.1 CDS CpB0952 NC_005043.1 1047778 1048755 R similar to bisphosphonucleoside 3(2')-phosphohydrolase SAL1 - Arabidopsis thaliana; bisphosphonucleoside 3(2')-phosphohydrolase-like protein complement(1047778..1048755) Chlamydophila pneumoniae TW-183 1467631 NP_877225.1 CDS CpB0953 NC_005043.1 1048885 1049646 D similar to 2-acylglycerophosphoethanolamine acyl transferase/acyl carrier - Escherichia coli; 2-acylglycerophosphoethanolamine acyl transferase/acyl carrier protein synthetase 1048885..1049646 Chlamydophila pneumoniae TW-183 1467632 NP_877226.1 CDS CpB0954 NC_005043.1 1049664 1051280 D Synthesizes thioester adducts of fatty acids enzymatically to the phosphopantetheine group of acyl carrier protein; long chain fatty acid--ACP ligase 1049664..1051280 Chlamydophila pneumoniae TW-183 1467633 NP_877227.1 CDS CpB0956 NC_005043.1 1051334 1052446 D catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 1051334..1052446 Chlamydophila pneumoniae TW-183 1467634 NP_877228.1 CDS priA NC_005043.1 1052375 1054624 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(1052375..1054624) Chlamydophila pneumoniae TW-183 1467635 NP_877229.1 CDS CpB0957 NC_005043.1 1054573 1055250 R similar to hypothetical protein CT779 - Chlamydia trachomatis; hypothetical protein complement(1054573..1055250) Chlamydophila pneumoniae TW-183 1467636 NP_877230.1 CDS CpB0958 NC_005043.1 1055410 1055910 D similar to probable thioredoxin disulfide isomerase - Chlamydia trachomatis; thioredoxin disulfide isomerase 1055410..1055910 Chlamydophila pneumoniae TW-183 1467637 NP_877231.1 CDS CpB0959 NC_005043.1 1056017 1057159 R similar to hypothetical protein - Chlamydia psittaci; hypothetical protein complement(1056017..1057159) Chlamydophila pneumoniae TW-183 1467638 NP_877232.1 CDS CpB0960 NC_005043.1 1057231 1058331 R similar to hypothetical protein - Chlamydia psittaci; hypothetical protein complement(1057231..1058331) Chlamydophila pneumoniae TW-183 1467639 NP_877233.1 CDS CpB0961 NC_005043.1 1058533 1059642 R similar to hypothetical protein - Chlamydia psittaci; hypothetical protein complement(1058533..1059642) Chlamydophila pneumoniae TW-183 1467640 NP_877234.1 CDS CpB0962 NC_005043.1 1059728 1059880 D hypothetical protein 1059728..1059880 Chlamydophila pneumoniae TW-183 1467641 NP_877235.1 CDS CpB0963 NC_005043.1 1060243 1060683 D hypothetical protein 1060243..1060683 Chlamydophila pneumoniae TW-183 1467642 NP_877236.1 CDS CpB0964 NC_005043.1 1060719 1060898 R hypothetical protein complement(1060719..1060898) Chlamydophila pneumoniae TW-183 1467643 NP_877237.1 CDS lysS NC_005043.1 1061488 1063071 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 1061488..1063071 Chlamydophila pneumoniae TW-183 1467644 NP_877238.1 CDS cysS NC_005043.1 1063068 1064492 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(1063068..1064492) Chlamydophila pneumoniae TW-183 1467645 NP_877239.1 CDS CpB0968 NC_005043.1 1064885 1065931 D similar to probable disulfide bond isomerase - Chlamydia trachomatis; disulfide bond isomerase 1064885..1065931 Chlamydophila pneumoniae TW-183 1467646 NP_877240.1 CDS rnpA NC_005043.1 1065873 1066292 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(1065873..1066292) Chlamydophila pneumoniae TW-183 1467647 NP_877241.1 CDS rpmH NC_005043.1 1066304 1066441 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(1066304..1066441) Chlamydophila pneumoniae TW-183 1467648 NP_877242.1 CDS rpmJ NC_005043.1 1066686 1066823 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 1066686..1066823 Chlamydophila pneumoniae TW-183 1467649 NP_877243.1 CDS rpsN NC_005043.1 1066846 1067151 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 1066846..1067151 Chlamydophila pneumoniae TW-183 1467650 NP_877244.1 CDS CpB0972 NC_005043.1 1067196 1067672 R similar to hypothetical protein CT788 - Chlamydia trachomatis; hypothetical protein complement(1067196..1067672) Chlamydophila pneumoniae TW-183 1467651 NP_877245.1 CDS CpB0973 NC_005043.1 1068078 1068548 D similar to N5-(1-carboxyethyl)-L-ornithine synthase - Lactococcus lactis; hypothetical protein 1068078..1068548 Chlamydophila pneumoniae TW-183 1467652 NP_877246.1 CDS uvrC NC_005043.1 1068551 1070362 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(1068551..1070362) Chlamydophila pneumoniae TW-183 1467653 NP_877247.1 CDS mutS NC_005043.1 1070365 1072851 R DNA mismatch repair protein; This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(1070365..1072851) Chlamydophila pneumoniae TW-183 1467654 NP_877248.1 CDS CpB0976 NC_005043.1 1072944 1073105 R hypothetical protein complement(1072944..1073105) Chlamydophila pneumoniae TW-183 1467655 NP_877249.1 CDS dnaG NC_005043.1 1073335 1075107 D synthesizes RNA primers at the replication forks; DNA primase 1073335..1075107 Chlamydophila pneumoniae TW-183 1467656 NP_877250.1 CDS CpB0978 NC_005043.1 1075328 1075591 D similar to hypothetical protein CT794.1 - Chlamydia trachomatis; hypothetical protein 1075328..1075591 Chlamydophila pneumoniae TW-183 1467657 NP_877251.1 CDS CpB0979 NC_005043.1 1075862 1076350 D hypothetical protein 1075862..1076350 Chlamydophila pneumoniae TW-183 1467658 NP_877252.1 CDS CpB0980 NC_005043.1 1076420 1077013 D similar to hypothetical protein CT795 - Chlamydia trachomatis; hypothetical protein 1076420..1077013 Chlamydophila pneumoniae TW-183 1467659 NP_877253.1 CDS CpB0981 NC_005043.1 1077092 1080124 R similar to glycyl-tRNA synthetase family; glycyl-tRNA synthetase complement(1077092..1080124) Chlamydophila pneumoniae TW-183 1467660 NP_877254.1 CDS CpB0982 NC_005043.1 1080167 1080361 R hypothetical protein complement(1080167..1080361) Chlamydophila pneumoniae TW-183 1467661 NP_877255.1 CDS CpB0984 NC_005043.1 1080792 1081412 D similar to CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase family; CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase 1080792..1081412 Chlamydophila pneumoniae TW-183 1467662 NP_877256.1 CDS glgA NC_005043.1 1081394 1082824 R catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase complement(1081394..1082824) Chlamydophila pneumoniae TW-183 1467663 NP_877257.1 CDS CpB0985 NC_005043.1 1083045 1083236 D hypothetical protein 1083045..1083236 Chlamydophila pneumoniae TW-183 1467664 NP_877258.1 CDS CpB0986 NC_005043.1 1083279 1083836 D the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 1083279..1083836 Chlamydophila pneumoniae TW-183 1467665 NP_877259.1 CDS CpB0987 NC_005043.1 1083838 1084380 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 1083838..1084380 Chlamydophila pneumoniae TW-183 1467666 NP_877260.1 CDS rpsF NC_005043.1 1084472 1084810 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 1084472..1084810 Chlamydophila pneumoniae TW-183 1467667 NP_877261.1 CDS rpsR NC_005043.1 1084828 1085076 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 1084828..1085076 Chlamydophila pneumoniae TW-183 1467668 NP_877262.1 CDS rplI NC_005043.1 1085092 1085601 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 1085092..1085601 Chlamydophila pneumoniae TW-183 1467669 NP_877263.1 CDS CpB0991 NC_005043.1 1085636 1086061 D catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1085636..1086061 Chlamydophila pneumoniae TW-183 1467670 NP_877264.1 CDS CpB0992 NC_005043.1 1086004 1086528 D similar to probable kinase - Chlamydia trachomatis [contains framshift]; kinase 1086004..1086528 Chlamydophila pneumoniae TW-183 1467671 NP_877265.1 CDS CpB0993 NC_005043.1 1086910 1088262 D similar to hypothetical protein CT805 - Chlamydia trachomatis; hypothetical protein 1086910..1088262 Chlamydophila pneumoniae TW-183 1467672 NP_877266.1 CDS CpB0994 NC_005043.1 1088310 1091138 R similar to protein-degrading enzymes; protein-degrading enzyme complement(1088310..1091138) Chlamydophila pneumoniae TW-183 1467673 NP_877267.1 CDS CpB0995 NC_005043.1 1091140 1092135 R similar to glycerol-3-phosphate acyltransferase family; glycerol-3-phosphate acyltransferase complement(1091140..1092135) Chlamydophila pneumoniae TW-183 1467674 NP_877268.1 CDS CpB0996 NC_005043.1 1092146 1093693 R similar to cytosolic axial filament protein cafA and ribonuclease E - Escherichia coli; cytosolic axial filament protein cafA and ribonuclease E complement(1092146..1093693) Chlamydophila pneumoniae TW-183 1467675 NP_877269.1 CDS CpB0997 NC_005043.1 1093994 1094455 D similar to hypothetical protein CT809 - Chlamydia trachomatis; hypothetical protein 1093994..1094455 Chlamydophila pneumoniae TW-183 1467676 NP_877270.1 CDS rpmF NC_005043.1 1094468 1094650 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1094468..1094650 Chlamydophila pneumoniae TW-183 1467677 NP_877271.1 CDS CpB0999 NC_005043.1 1094666 1095628 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1094666..1095628 Chlamydophila pneumoniae TW-183 1467678 NP_877272.1 CDS CpB1000 NC_005043.1 1095814 1100577 D similar to outer membrane protein 11 - Chlamydiae pneumoniae, strain VR1310; hypothetical protein 1095814..1100577 Chlamydophila pneumoniae TW-183 1467679 NP_877273.1 CDS CpB1001 NC_005043.1 1100648 1102102 R hypothetical protein complement(1100648..1102102) Chlamydophila pneumoniae TW-183 1467680 NP_877274.1 CDS lpxB NC_005043.1 1102272 1104086 R catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate; lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase complement(1102272..1104086) Chlamydophila pneumoniae TW-183 1467681 NP_877275.1 CDS CpB1003 NC_005043.1 1104095 1105345 R similar to poly(A) polymerase family; poly(A) polymerase complement(1104095..1105345) Chlamydophila pneumoniae TW-183 1467682 NP_877276.1 CDS glmM NC_005043.1 1105862 1107238 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 1105862..1107238 Chlamydophila pneumoniae TW-183 1467683 NP_877277.1 CDS CpB1005 NC_005043.1 1107245 1109074 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 1107245..1109074 Chlamydophila pneumoniae TW-183 1467684 NP_877278.1 CDS CpB1006 NC_005043.1 1109162 1110352 D similar to tyrosine-specific transport protein - Escherichia coli; tyrosine-specific transport protein 1109162..1110352 Chlamydophila pneumoniae TW-183 1467685 NP_877279.1 CDS CpB1007 NC_005043.1 1110403 1111119 D similar to probable transport permease - Chlamydia trachomatis; transport permease 1110403..1111119 Chlamydophila pneumoniae TW-183 1467686 NP_877280.1 CDS CpB1008 NC_005043.1 1111128 1112060 R similar to ftsY cell division protein family; ftsY cell division protein complement(1111128..1112060) Chlamydophila pneumoniae TW-183 1467687 NP_877281.1 CDS sucC NC_005043.1 1112071 1113231 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 1112071..1113231 Chlamydophila pneumoniae TW-183 1467688 NP_877282.1 CDS CpB1010 NC_005043.1 1113245 1114126 D Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 1113245..1114126 Chlamydophila pneumoniae TW-183 1467689 NP_877283.1 CDS CpB1011 NC_005043.1 1114378 1114548 D hypothetical protein 1114378..1114548 Chlamydophila pneumoniae TW-183 1467690 NP_877284.1 CDS CpB1012 NC_005043.1 1114937 1115341 D hypothetical protein 1114937..1115341 Chlamydophila pneumoniae TW-183 1467691 NP_877285.1 CDS CpB1013 NC_005043.1 1115783 1116889 D hypothetical protein 1115783..1116889 Chlamydophila pneumoniae TW-183 1467692 NP_877286.1 CDS CpB1014 NC_005043.1 1117072 1118106 D hypothetical protein 1117072..1118106 Chlamydophila pneumoniae TW-183 1467693 NP_877287.1 CDS CpB1015 NC_005043.1 1118366 1119397 D hypothetical protein 1118366..1119397 Chlamydophila pneumoniae TW-183 1467694 NP_877288.1 CDS htrA NC_005043.1 1119696 1121147 D similar to serine protease DO family; HtrA; serine protease DO 1119696..1121147 Chlamydophila pneumoniae TW-183 1467695 NP_877289.1 CDS CpB1017 NC_005043.1 1121202 1122683 R similar to hypothetical protein - Schizosaccharomyces pombe; hypothetical protein complement(1121202..1122683) Chlamydophila pneumoniae TW-183 1467696 NP_877290.1 CDS CpB1018 NC_005043.1 1122732 1125656 D similar to Chlamydia trachomatis zinc metalloproteinase; insulinase family; zinc metalloproteinase 1122732..1125656 Chlamydophila pneumoniae TW-183 1467697 NP_877291.1 CDS CpB1019 NC_005043.1 1125660 1126895 R similar to hypothetical protein CT825 - Chlamydia trachomatis; hypothetical protein complement(1125660..1126895) Chlamydophila pneumoniae TW-183 1467698 NP_877292.1 CDS CpB1020 NC_005043.1 1126904 1127701 R similar to CDP-diacylglycerol-serine O-phosphatidyltransferase - Bacillus subtilis; CDP-diacylglycerol-serine O-phosphatidyltransferase complement(1126904..1127701) Chlamydophila pneumoniae TW-183 1467699 NP_877293.1 CDS CpB1021 NC_005043.1 1128080 1131214 D catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1128080..1131214 Chlamydophila pneumoniae TW-183 1467700 NP_877294.1 CDS CpB1022 NC_005043.1 1131178 1132275 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 1131178..1132275 Chlamydophila pneumoniae TW-183 1467701 NP_877295.1 CDS trmB NC_005043.1 1132425 1133099 D tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 1132425..1133099 Chlamydophila pneumoniae TW-183 1467702 NP_877296.1 CDS CpB1025 NC_005043.1 1133217 1133819 D similar to probable rRNA methylase - Chlamydia trachomatis; rRNA methylase 1133217..1133819 Chlamydophila pneumoniae TW-183 1467703 NP_877297.1 CDS murB NC_005043.1 1133773 1134669 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(1133773..1134669) Chlamydophila pneumoniae TW-183 1467704 NP_877298.1 CDS nusB NC_005043.1 1134714 1135109 R Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB complement(1134714..1135109) Chlamydophila pneumoniae TW-183 1467705 NP_877299.1 CDS CpB1027 NC_005043.1 1135494 1135679 R hypothetical protein complement(1135494..1135679) Chlamydophila pneumoniae TW-183 1467706 NP_877300.1 CDS infC NC_005043.1 1135687 1136145 D IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 1135687..1136145 Chlamydophila pneumoniae TW-183 1467707 NP_877301.1 CDS rpmI NC_005043.1 1136123 1136317 D similar to ribosomal protein L35 family; 50S ribosomal protein L35 1136123..1136317 Chlamydophila pneumoniae TW-183 1467708 NP_877302.1 CDS rplT NC_005043.1 1136336 1136701 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1136336..1136701 Chlamydophila pneumoniae TW-183 1467709 NP_877303.1 CDS pheS NC_005043.1 1136716 1137735 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1136716..1137735 Chlamydophila pneumoniae TW-183 1467710 NP_877304.1 CDS CpB1033 NC_005043.1 1138100 1140145 D similar to hypothetical protein CT837 - Chlamydia trachomatis; hypothetical protein 1138100..1140145 Chlamydophila pneumoniae TW-183 1467711 NP_877305.1 CDS CpB1032 NC_005043.1 1140114 1141214 R similar to hypothetical protein CT838 - Chlamydia trachomatis; hypothetical protein complement(1140114..1141214) Chlamydophila pneumoniae TW-183 1467712 NP_877306.1 CDS CpB1034 NC_005043.1 1141218 1142291 R similar to hypothetical protein CT839 - Chlamydia trachomatis; hypothetical protein complement(1141218..1142291) Chlamydophila pneumoniae TW-183 1467713 NP_877307.1 CDS CpB1035 NC_005043.1 1142410 1143369 D similar to probable p-loop ATPase - Chlamydia trachomatis; p-loop ATPase 1142410..1143369 Chlamydophila pneumoniae TW-183 1467714 NP_877308.1 CDS ftsH NC_005043.1 1143557 1146289 D cell division protein; similar to cell division protein ftsH family; hypothetical protein 1143557..1146289 Chlamydophila pneumoniae TW-183 1467715 NP_877309.1 CDS CpB1037 NC_005043.1 1146465 1148549 R similar to polyribonucleotide nucleotidyltransferase family; polynucleotide phosphorylase complement(1146465..1148549) Chlamydophila pneumoniae TW-183 1467716 NP_877310.1 CDS rpsO NC_005043.1 1148590 1148859 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(1148590..1148859) Chlamydophila pneumoniae TW-183 1467717 NP_877311.1 CDS CpB1039 NC_005043.1 1149128 1149574 D similar to probable cytosine deaminase - Chlamydia trachomatis; cytosine deaminase 1149128..1149574 Chlamydophila pneumoniae TW-183 1467718 NP_877312.1 CDS CpB1040 NC_005043.1 1149564 1149794 D similar to hypothetical protein CT845 - Chlamydia trachomatis; hypothetical protein 1149564..1149794 Chlamydophila pneumoniae TW-183 1467719 NP_877313.1 CDS CpB1041 NC_005043.1 1149791 1150498 R similar to hypothetical protein CT846 - Chlamydia trachomatis; hypothetical protein complement(1149791..1150498) Chlamydophila pneumoniae TW-183 1467720 NP_877314.1 CDS CpB1042 NC_005043.1 1150578 1151099 R similar to hypothetical protein CT847 - Chlamydia trachomatis; hypothetical protein complement(1150578..1151099) Chlamydophila pneumoniae TW-183 1467721 NP_877315.1 CDS CpB1043 NC_005043.1 1151114 1151635 R similar to hypothetical protein CT848 - Chlamydia trachomatis; hypothetical protein complement(1151114..1151635) Chlamydophila pneumoniae TW-183 1467722 NP_877316.1 CDS CpB1044 NC_005043.1 1151689 1152078 R similar to hypothetical protein CT849 - Chlamydia trachomatis; hypothetical protein complement(1151689..1152078) Chlamydophila pneumoniae TW-183 1467723 NP_877317.1 CDS CpB1045 NC_005043.1 1152392 1152613 D similar to hypothetical protein CT849.1 - Chlamydia trachomatis; hypothetical protein 1152392..1152613 Chlamydophila pneumoniae TW-183 1467724 NP_877318.1 CDS CpB1047 NC_005043.1 1152631 1153929 D similar to hypothetical protein CT850 - Chlamydia trachomatis; hypothetical protein 1152631..1153929 Chlamydophila pneumoniae TW-183 1467725 NP_877319.2 CDS CpB1046 NC_005043.1 1153886 1154761 R catalyzes the removal of N-terminal amino acids from peptides and arylamides; methionine aminopeptidase complement(1153886..1154761) Chlamydophila pneumoniae TW-183 1467726 NP_877320.1 CDS CpB1048 NC_005043.1 1154767 1155375 R similar to hypothetical protein CT852 - Chlamydia trachomatis; hypothetical protein complement(1154767..1155375) Chlamydophila pneumoniae TW-183 1467727 NP_877321.1 CDS CpB1049 NC_005043.1 1155602 1156009 R similar to hypothetical protein CT853 - Chlamydia trachomatis; hypothetical protein complement(1155602..1156009) Chlamydophila pneumoniae TW-183 1467728 NP_877322.1 CDS CpB1050 NC_005043.1 1156121 1157896 R similar to ABC transporter family; ABC transporter complement(1156121..1157896) Chlamydophila pneumoniae TW-183 1467729 NP_877323.1 CDS fumC NC_005043.1 1157948 1159330 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 1157948..1159330 Chlamydophila pneumoniae TW-183 1467730 NP_877324.1 CDS CpB1052 NC_005043.1 1159432 1161129 R similar to sulfate transporter family; sulfate transporter complement(1159432..1161129) Chlamydophila pneumoniae TW-183 1467731 NP_877325.1 CDS CpB1053 NC_005043.1 1161337 1162599 D similar to hypothetical protein CT858 - Chlamydia trachomatis; hypothetical protein 1161337..1162599 Chlamydophila pneumoniae TW-183 1467732 NP_877326.1 CDS CpB1054 NC_005043.1 1162745 1164604 D similar to hypothetical protein CT858 - Chlamydia trachomatis; hypothetical protein 1162745..1164604 Chlamydophila pneumoniae TW-183 1467733 NP_877327.1 CDS ispH NC_005043.1 1164709 1165641 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1164709..1165641 Chlamydophila pneumoniae TW-183 1467734 NP_877328.1 CDS CpB1056 NC_005043.1 1165601 1166335 D hypothetical protein 1165601..1166335 Chlamydophila pneumoniae TW-183 1467735 NP_877329.1 CDS CpB1057 NC_005043.1 1166338 1167693 R similar to hypothetical protein CT860 - Chlamydia trachomatis; hypothetical protein complement(1166338..1167693) Chlamydophila pneumoniae TW-183 1467736 NP_877330.1 CDS CpB1059 NC_005043.1 1167700 1167861 D hypothetical protein 1167700..1167861 Chlamydophila pneumoniae TW-183 1467737 NP_877331.1 CDS CpB1058 NC_005043.1 1167850 1169382 R similar to hypothetical protein CT861 - Chlamydia trachomatis; hypothetical protein complement(1167850..1169382) Chlamydophila pneumoniae TW-183 1467738 NP_877332.1 CDS CpB1060 NC_005043.1 1169398 1169916 R similar to chaperone SycD - Yersinia enterocolitica; chaperone SycD complement(1169398..1169916) Chlamydophila pneumoniae TW-183 1467739 NP_877333.1 CDS CpB1061 NC_005043.1 1169916 1171376 R similar to hypothetical protein CT863 - Chlamydia trachomatis; hypothetical protein complement(1169916..1171376) Chlamydophila pneumoniae TW-183 1467740 NP_877334.1 CDS CpB1062 NC_005043.1 1171738 1172037 D hypothetical protein 1171738..1172037 Chlamydophila pneumoniae TW-183 1467741 NP_877335.1 CDS xerD NC_005043.1 1172034 1172933 R site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD complement(1172034..1172933) Chlamydophila pneumoniae TW-183 1467742 NP_877336.1 CDS pgi NC_005043.1 1173005 1174585 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 1173005..1174585 Chlamydophila pneumoniae TW-183 1467743 NP_877337.1 CDS CpB1065 NC_005043.1 1174700 1174843 D similar to late stage protein - Chlamydia trachomatis; late stage protein 1174700..1174843 Chlamydophila pneumoniae TW-183 1467744 NP_877338.1 CDS CpB1066 NC_005043.1 1174878 1176458 D hypothetical protein 1174878..1176458 Chlamydophila pneumoniae TW-183 1467745 NP_877339.1 CDS CpB1067 NC_005043.1 1176701 1177702 D catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase 1176701..1177702 Chlamydophila pneumoniae TW-183 1467746 NP_877340.1 CDS CpB1069 NC_005043.1 1177708 1178547 D hypothetical protein 1177708..1178547 Chlamydophila pneumoniae TW-183 1467747 NP_877341.1 CDS CpB1068 NC_005043.1 1178540 1179586 R similar to probable D-amino acid dehydrogenase - Chlamydia trachomatis; D-amino acid dehydrogenase complement(1178540..1179586) Chlamydophila pneumoniae TW-183 1467748 NP_877342.1 CDS CpB1070 NC_005043.1 1179577 1179762 R hypothetical protein complement(1179577..1179762) Chlamydophila pneumoniae TW-183 1467749 NP_877343.1 CDS CpB1071 NC_005043.1 1179795 1181252 R similar to arginine/ornithine antiporter proteins; arginine/ornithine antiporter protein complement(1179795..1181252) Chlamydophila pneumoniae TW-183 1467750 NP_877344.1 CDS CpB1072 NC_005043.1 1181263 1181850 R similar to hypothetical protein CT373 - Chlamydia trachomatis; hypothetical protein complement(1181263..1181850) Chlamydophila pneumoniae TW-183 1467751 NP_877345.1 CDS CpB1073 NC_005043.1 1181884 1183308 R similar to hypothetical protein CT372 - Chlamydia trachomatis; hypothetical protein complement(1181884..1183308) Chlamydophila pneumoniae TW-183 1467752 NP_877346.1 CDS CpB1074 NC_005043.1 1183429 1184217 R similar to probable outer membrane protein - Chlamydia trachomatis; outer membrane protein complement(1183429..1184217) Chlamydophila pneumoniae TW-183 1467753 NP_877347.2 CDS aroDE NC_005043.1 1184267 1185700 R AroDE; bifunctional enzyme; can convert 3-dehydroquinate to 3-dehydroshkimate and then to shikimate; involved in the synthesis of aromatic amino acids and other metabolites; type I 3-DHQase; bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein complement(1184267..1185700) Chlamydophila pneumoniae TW-183 1467754 NP_877348.1 CDS aroB NC_005043.1 1185681 1186823 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(1185681..1186823) Chlamydophila pneumoniae TW-183 1467755 NP_877349.1 CDS CpB1077 NC_005043.1 1186820 1187899 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(1186820..1187899) Chlamydophila pneumoniae TW-183 1467756 NP_877350.1 CDS CpB1078 NC_005043.1 1187896 1188426 R catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase complement(1187896..1188426) Chlamydophila pneumoniae TW-183 1467757 NP_877351.1 CDS CpB1079 NC_005043.1 1188362 1189699 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(1188362..1189699) Chlamydophila pneumoniae TW-183 1467758 NP_877352.1 CDS CpB1080 NC_005043.1 1189770 1190441 R hypothetical protein complement(1189770..1190441) Chlamydophila pneumoniae TW-183 1467759 NP_877353.1 CDS CpB1081 NC_005043.1 1190423 1191694 R similar to adenosylmethionine--8-amino-7-oxononanoate transaminase - Bacillus sphaericus; adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(1190423..1191694) Chlamydophila pneumoniae TW-183 1467760 NP_877354.1 CDS CpB1082 NC_005043.1 1191631 1192290 R similar to dethiobiotin synthase - Bacillus sphaericus; dethiobiotin synthase complement(1191631..1192290) Chlamydophila pneumoniae TW-183 1467761 NP_877355.1 CDS CpB1083 NC_005043.1 1192269 1193417 R similar to 8-amino-7-oxononanoate synthase family; 8-amino-7-oxononanoate synthase complement(1192269..1193417) Chlamydophila pneumoniae TW-183 1467762 NP_877356.1 CDS CpB1084 NC_005043.1 1193396 1194391 R similar to biotin synthetase family; biotin synthetase complement(1193396..1194391) Chlamydophila pneumoniae TW-183 1467763 NP_877357.1 CDS CpB1085 NC_005043.1 1194598 1195296 R similar to hypothetical protein ypdP - Bacillus subtilis; hypothetical protein complement(1194598..1195296) Chlamydophila pneumoniae TW-183 1467764 NP_877358.1 CDS phhA NC_005043.1 1195287 1196375 R catalyzes the formation of tyrosine, dihydroxyphenylalanine, and 5-hydroxytryptophan from phenylalanine, tyrosine, and tryptophan respectively; aromatic amino acid hydroxylase complement(1195287..1196375) Chlamydophila pneumoniae TW-183 1467765 NP_877359.1 CDS CpB1088 NC_005043.1 1196264 1197046 D catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 1196264..1197046 Chlamydophila pneumoniae TW-183 1467766 NP_877360.1 CDS CpB1087 NC_005043.1 1197024 1197215 R hypothetical protein complement(1197024..1197215) Chlamydophila pneumoniae TW-183 1467767 NP_877361.1 CDS CpB1089 NC_005043.1 1197306 1198307 D catalyzes the formation of aspartate semialdehyde from aspartyl phosphate; aspartate-semialdehyde dehydrogenase 1197306..1198307 Chlamydophila pneumoniae TW-183 1467768 NP_877362.1 CDS CpB1090 NC_005043.1 1198295 1199617 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; aspartate kinase 1198295..1199617 Chlamydophila pneumoniae TW-183 1467769 NP_877363.1 CDS dapA NC_005043.1 1199626 1200501 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1199626..1200501 Chlamydophila pneumoniae TW-183 1467770 NP_877364.1 CDS CpB1092 NC_005043.1 1200662 1200973 D hypothetical protein 1200662..1200973 Chlamydophila pneumoniae TW-183 1467771 NP_877365.1 CDS CpB1093 NC_005043.1 1201117 1201872 D hypothetical protein 1201117..1201872 Chlamydophila pneumoniae TW-183 1467772 NP_877366.1 CDS CpB1095 NC_005043.1 1201853 1202404 D hypothetical protein 1201853..1202404 Chlamydophila pneumoniae TW-183 1467773 NP_877367.1 CDS CpB1094 NC_005043.1 1202388 1202489 R hypothetical protein complement(1202388..1202489) Chlamydophila pneumoniae TW-183 1467774 NP_877368.1 CDS CpB1097 NC_005043.1 1205398 1206228 D similar to hb4 protein, Chlamydia pneumoniae strain VR1310; Hb4 1205398..1206228 Chlamydophila pneumoniae TW-183 1467776 NP_877369.1 CDS CpB1098 NC_005043.1 1206231 1206935 D similar to pHB5 protein, Chlamydia pneumoniae; hypothetical protein 1206231..1206935 Chlamydophila pneumoniae TW-183 1467777 NP_877370.1 CDS CpB1099 NC_005043.1 1207201 1209303 D similar to hypothetical protein yyaL - Bacillus subtilis; hypothetical protein 1207201..1209303 Chlamydophila pneumoniae TW-183 1467778 NP_877371.1 CDS CpB1100 NC_005043.1 1209452 1210543 D similar to hypothetical protein CT355 - Chlamydia trachomatis; hypothetical protein 1209452..1210543 Chlamydophila pneumoniae TW-183 1467779 NP_877372.1 CDS ksgA NC_005043.1 1210552 1211385 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1210552..1211385 Chlamydophila pneumoniae TW-183 1467780 NP_877373.1 CDS CpB1102 NC_005043.1 1211428 1213362 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(1211428..1213362) Chlamydophila pneumoniae TW-183 1467781 NP_877374.1 CDS CpB1103 NC_005043.1 1213367 1213624 R similar to hypothetical protein CT330 - Chlamydia trachomatis; hypothetical protein complement(1213367..1213624) Chlamydophila pneumoniae TW-183 1467782 NP_877375.1 CDS xseB NC_005043.1 1213629 1213856 R catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit complement(1213629..1213856) Chlamydophila pneumoniae TW-183 1467783 NP_877376.1 CDS xseA NC_005043.1 1213860 1215524 R bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit complement(1213860..1215524) Chlamydophila pneumoniae TW-183 1467784 NP_877377.1 CDS tpiA NC_005043.1 1215655 1216419 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 1215655..1216419 Chlamydophila pneumoniae TW-183 1467785 NP_877378.1 CDS CpB1107 NC_005043.1 1216432 1216602 D hypothetical protein 1216432..1216602 Chlamydophila pneumoniae TW-183 1467786 NP_877379.1 CDS CpB1108 NC_005043.1 1216629 1216799 R hypothetical protein complement(1216629..1216799) Chlamydophila pneumoniae TW-183 1467787 NP_877380.1 CDS secG NC_005043.1 1216839 1217195 D preprotein translocase subunit SecG 1216839..1217195 Chlamydophila pneumoniae TW-183 1467788 NP_877381.1 CDS CpB1110 NC_005043.1 1217209 1217361 R hypothetical protein complement(1217209..1217361) Chlamydophila pneumoniae TW-183 1467789 NP_877382.1 CDS def NC_005043.1 1217385 1217999 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1217385..1217999 Chlamydophila pneumoniae TW-183 1467790 NP_877383.1 CDS CpB1112 NC_005043.1 1218066 1218962 R An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease HIII complement(1218066..1218962) Chlamydophila pneumoniae TW-183 1467791 NP_877384.1 CDS CpB1113 NC_005043.1 1219052 1219234 R hypothetical protein complement(1219052..1219234) Chlamydophila pneumoniae TW-183 1467792 NP_877385.1 CDS CpB1114 NC_005043.1 1219217 1219648 D similar to probable hth transcription regulator - Chlamydia trachomatis; HTH transcription regulator 1219217..1219648 Chlamydophila pneumoniae TW-183 1467793 NP_877386.1 CDS CpB1115 NC_005043.1 1219845 1221215 R hypothetical protein complement(1219845..1221215) Chlamydophila pneumoniae TW-183 1467794 NP_877387.1 CDS CpB1116 NC_005043.1 1221587 1223029 R hypothetical protein complement(1221587..1223029) Chlamydophila pneumoniae TW-183 1467795 NP_877388.1 CDS CpB1117 NC_005043.1 1223674 1224543 D similar to probable outer membrane protein - Chlamydia trachomatis; hypothetical protein 1223674..1224543 Chlamydophila pneumoniae TW-183 1467796 NP_877389.1 CDS CpB1118 NC_005043.1 1224716 1225540 D similar to probable outer membrane protein - Chlamydia trachomatis; outer membrane protein 1224716..1225540 Chlamydophila pneumoniae TW-183 1467797 CpBt01 tRNA CpBt01 NC_005043.1 84945 85017 R tRNA-Met complement(84945..85017) Chlamydophila pneumoniae TW-183 3284346 CpBt02 tRNA CpBt02 NC_005043.1 87152 87223 D tRNA-Thr 87152..87223 Chlamydophila pneumoniae TW-183 3284347 CpBt03 tRNA CpBt03 NC_005043.1 88493 88565 D tRNA-Trp 88493..88565 Chlamydophila pneumoniae TW-183 3284336 CpBt04 tRNA CpBt04 NC_005043.1 161814 161885 R tRNA-Asn complement(161814..161885) Chlamydophila pneumoniae TW-183 3284339 CpBt05 tRNA CpBt05 NC_005043.1 196725 196797 D tRNA-Met 196725..196797 Chlamydophila pneumoniae TW-183 3284348 CpBt06 tRNA CpBt06 NC_005043.1 196813 196886 D tRNA-Met 196813..196886 Chlamydophila pneumoniae TW-183 3284337 CpBt07 tRNA CpBt07 NC_005043.1 266407 266480 R tRNA-Ile complement(266407..266480) Chlamydophila pneumoniae TW-183 3284350 CpBt08 tRNA CpBt08 NC_005043.1 266485 266557 R tRNA-Ala complement(266485..266557) Chlamydophila pneumoniae TW-183 3284349 CpBt09 tRNA CpBt09 NC_005043.1 290732 290814 R tRNA-Tyr complement(290732..290814) Chlamydophila pneumoniae TW-183 3284324 CpBt10 tRNA CpBt10 NC_005043.1 290820 290892 R tRNA-Thr complement(290820..290892) Chlamydophila pneumoniae TW-183 3284323 CpBt11 tRNA CpBt11 NC_005043.1 293490 293562 D tRNA-Val 293490..293562 Chlamydophila pneumoniae TW-183 3284361 CpBt12 tRNA CpBt12 NC_005043.1 293566 293639 D tRNA-Asp 293566..293639 Chlamydophila pneumoniae TW-183 3284362 CpBt13 tRNA CpBt13 NC_005043.1 407349 407423 D tRNA-Pro 407349..407423 Chlamydophila pneumoniae TW-183 3284352 CpBt14 tRNA CpBt14 NC_005043.1 459642 459715 D tRNA-Arg 459642..459715 Chlamydophila pneumoniae TW-183 3284351 CpBt15 tRNA CpBt15 NC_005043.1 624224 624310 R tRNA-Ser complement(624224..624310) Chlamydophila pneumoniae TW-183 3284360 CpBt16 tRNA CpBt16 NC_005043.1 628696 628768 R tRNA-Phe complement(628696..628768) Chlamydophila pneumoniae TW-183 3284331 CpBt17 tRNA CpBt17 NC_005043.1 669559 669641 D tRNA-Leu 669559..669641 Chlamydophila pneumoniae TW-183 3284358 CpBt18 tRNA CpBt18 NC_005043.1 674587 674660 D tRNA-Arg 674587..674660 Chlamydophila pneumoniae TW-183 3284357 CpBt19 tRNA CpBt19 NC_005043.1 677501 677582 R tRNA-Leu complement(677501..677582) Chlamydophila pneumoniae TW-183 3284356 CpBt20 tRNA CpBt20 NC_005043.1 705677 705764 R tRNA-Ser complement(705677..705764) Chlamydophila pneumoniae TW-183 3284338 CpBt21 tRNA CpBt21 NC_005043.1 713212 713294 R tRNA-Leu complement(713212..713294) Chlamydophila pneumoniae TW-183 3284340 CpBt22 tRNA CpBt22 NC_005043.1 736726 736809 D tRNA-Leu 736726..736809 Chlamydophila pneumoniae TW-183 3284332 CpBt23 tRNA CpBt23 NC_005043.1 778933 779003 D tRNA-Gly 778933..779003 Chlamydophila pneumoniae TW-183 3284330 CpBt24 tRNA CpBt24 NC_005043.1 782145 782219 D tRNA-Glu 782145..782219 Chlamydophila pneumoniae TW-183 3284329 CpBt25 tRNA CpBt25 NC_005043.1 782245 782317 D tRNA-Lys 782245..782317 Chlamydophila pneumoniae TW-183 3284328 CpBt26 tRNA CpBt26 NC_005043.1 784031 784103 R tRNA-Thr complement(784031..784103) Chlamydophila pneumoniae TW-183 3284333 CpBt27 tRNA CpBt27 NC_005043.1 804649 804721 R tRNA-Arg complement(804649..804721) Chlamydophila pneumoniae TW-183 3284363 CpBt28 tRNA CpBt28 NC_005043.1 833426 833498 D tRNA-Ala 833426..833498 Chlamydophila pneumoniae TW-183 3284341 CpBt29 tRNA CpBt29 NC_005043.1 841249 841322 D tRNA-Pro 841249..841322 Chlamydophila pneumoniae TW-183 3284354 CpBt30 tRNA CpBt30 NC_005043.1 874723 874796 D tRNA-Arg 874723..874796 Chlamydophila pneumoniae TW-183 3284342 CpBt31 tRNA CpBt31 NC_005043.1 958860 958931 R tRNA-Gly complement(958860..958931) Chlamydophila pneumoniae TW-183 3284344 CpBt32 tRNA CpBt32 NC_005043.1 997273 997346 R tRNA-His complement(997273..997346) Chlamydophila pneumoniae TW-183 3284343 CpBt33 tRNA CpBt33 NC_005043.1 1027857 1027927 R tRNA-Cys complement(1027857..1027927) Chlamydophila pneumoniae TW-183 3284326 CpBt34 tRNA CpBt34 NC_005043.1 1082956 1083027 D tRNA-Gln 1082956..1083027 Chlamydophila pneumoniae TW-183 3284325 CpBt35 tRNA CpBt35 NC_005043.1 1133091 1133164 R tRNA-Val complement(1133091..1133164) Chlamydophila pneumoniae TW-183 3284355 CpBt36 tRNA CpBt36 NC_005043.1 1137737 1137821 D tRNA-Ser 1137737..1137821 Chlamydophila pneumoniae TW-183 3284359 CpBt37 tRNA CpBt37 NC_005043.1 1171567 1171648 D tRNA-Leu 1171567..1171648 Chlamydophila pneumoniae TW-183 3284335 CpBt38 tRNA CpBt38 NC_005043.1 1225648 1225734 R tRNA-Ser complement(1225648..1225734) Chlamydophila pneumoniae TW-183 3284345 CpBr01 rRNA CpBr01 NC_005043.1 997888 999439 D 16S ribosomal RNA 997888..999439 Chlamydophila pneumoniae TW-183 3284334 CpBr02 rRNA CpBr02 NC_005043.1 999739 1002602 D 23S ribosomal RNA 999739..1002602 Chlamydophila pneumoniae TW-183 3284353 CpBr03 rRNA CpBr03 NC_005043.1 1002717 1002833 D 5S ribosomal RNA 1002717..1002833 Chlamydophila pneumoniae TW-183 3284327