-- dump date   	20140619_040726
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_004293171.1	[D] COG1192 ATPases involved in chromosome partitioning
YP_004293175.1	[L] COG0305 Replicative DNA helicase
YP_004421861.1	[H] COG0113 Delta-aminolevulinic acid dehydratase
YP_004421862.1	[C] COG1726 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA
YP_004421864.1	[K] COG0782 Transcription elongation factor
YP_004421865.1	[E] COG0436 Aspartate/tyrosine/aromatic aminotransferase
YP_004421866.1	[M] COG1792 Cell shape-determining protein
YP_004421867.1	[L] COG0210 Superfamily I DNA and RNA helicases
YP_004421868.1	[L] COG1330 Exonuclease V gamma subunit
YP_004421869.1	[GEPR] COG0477 Permeases of the major facilitator superfamily
YP_004421870.1	PRIAM ID: PRI000763; [P] COG0607 Rhodanese-related sulfurtransferase
YP_004421871.1	[J] COG0522 Ribosomal protein S4 and related proteins
YP_004421872.1	PRIAM ID: PRI001476; [L] COG0648 Endonuclease IV
YP_004421873.1	[R] COG0728 Uncharacterized membrane protein, putative virulence factor
YP_004421879.1	PRIAM ID: PRI001823; [V] COG1131 ABC-type multidrug transport system, ATPase component
YP_004421881.1	[E] COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
YP_004421882.1	[R] COG1837 Predicted RNA-binding protein (contains KH domain)
YP_004421883.1	[J] COG0564 Pseudouridylate synthases, 23S RNA-specific
YP_004421886.1	PRIAM ID: PRI001029; [L] COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
YP_004421887.1	PRIAM ID: PRI001027; [L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
YP_004421888.1	PRIAM ID: PRI004475; [H] COG0373 Glutamyl-tRNA reductase
YP_004421890.1	Similar to Chlamydophila pneumoniae type III secretion chaparone, CesT family
YP_004421896.1	[C] COG0056 F0F1-type ATP synthase, alpha subunit
YP_004421898.1	putative Chlamydophila psittaci chlamydia outer protein E; similar to Chlamydophila caviae hypothetical protein CCA00037 and to Chlamydophila pneumoniae hypothetical protein CPn0705
YP_004421899.1	[NU] COG1886 Flagellar motor switch/type III secretory pathway protein; putative structural component of Chlamydophila psittaci type III secretion system
YP_004421900.1	PRIAM ID: PRI002890; [RTKL] COG0515 Serine/threonine protein kinase
YP_004421901.1	[GEPR] COG0477 Permeases of the major facilitator superfamily
YP_004421902.1	PRIAM ID: PRI000136; [E] COG3869 Arginine kinase
YP_004421903.1	[S] COG3880 Uncharacterized protein with conserved CXXC pairs
YP_004421904.1	[J] COG0233 Ribosome recycling factor
YP_004421905.1	[F] COG0528 Uridylate kinase
YP_004421906.1	[J] COG0264 Translation elongation factor Ts
YP_004421907.1	[J] COG0052 Ribosomal protein S2
YP_004421908.1	Chlamydia major outer membrane protein; pfam01308
YP_004421910.1	PRIAM ID: PRI001033; [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2
YP_004421911.1	PRIAM ID: PRI004361; [R] COG0457 FOG: TPR repeat
YP_004421912.1	[O] COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component
YP_004421913.1	[R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase
YP_004421914.1	[O] COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component
YP_004421915.1	PRIAM ID: PRI001260; [E] COG0520 Selenocysteine lyase
YP_004421916.1	[G] COG0726 Predicted xylanase/chitin deacetylase
YP_004421918.1	[K] COG1475 Predicted transcriptional regulators
YP_004421919.1	PRIAM ID: PRI001824; [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase
YP_004421920.1	PRIAM ID: PRI001824; [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
YP_004421921.1	[P] COG1392 Phosphate transport regulator (distant homolog of PhoU)
YP_004421922.1	[P] COG0306 Phosphate/sulphate permeases
YP_004421923.1	[G] COG0126 3-phosphoglycerate kinase
YP_004421927.1	PRIAM ID: PRI000037; [J] COG0144 tRNA and rRNA cytosine-C5-methylases
YP_004421928.1	PRIAM ID: PRI002190; [M] COG1686 D-alanyl-D-alanine carboxypeptidase
YP_004421930.1	[T] COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase)
YP_004421932.1	[K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit
YP_004421934.1	PRIAM ID: PRI000723; [L] COG0587 DNA polymerase III, alpha subunit
YP_004421935.1	[GEPR] COG0477 Permeases of the major facilitator superfamily
YP_004421937.1	[E] COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis
YP_004421938.1	[J] COG0017 Aspartyl/asparaginyl-tRNA synthetases
YP_004421939.1	[O] COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1
YP_004421940.1	PRIAM ID: PRI003792; [J] COG0566 rRNA methylases
YP_004421941.1	[OC] COG0526 Thiol-disulfide isomerase and thioredoxins
YP_004421944.1	[R] COG0802 Predicted ATPase or kinase
YP_004421945.1	PRIAM ID: PRI000724; [L] COG2176 DNA polymerase III, alpha subunit (gram-positive type)
YP_004421946.1	PRIAM ID: PRI002810; [I] COG1607 Acyl-CoA hydrolase
YP_004421947.1	[M] COG0815 Apolipoprotein N-acyltransferase
YP_004421948.1	[M] COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase
YP_004421949.1	[I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
YP_004421950.1	[M] COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
YP_004421951.1	[F] COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN
YP_004421953.1	[J] COG0087 Ribosomal protein L3
YP_004421954.1	[J] COG0088 Ribosomal protein L4
YP_004421955.1	[J] COG0089 Ribosomal protein L23
YP_004421956.1	[J] COG0090 Ribosomal protein L2
YP_004421957.1	[J] COG0185 Ribosomal protein S19
YP_004421958.1	[J] COG0091 Ribosomal protein L22
YP_004421959.1	[J] COG0092 Ribosomal protein S3
YP_004421960.1	[J] COG0197 Ribosomal protein L16/L10E
YP_004421961.1	[J] COG0255 Ribosomal protein L29
YP_004421962.1	[J] COG0186 Ribosomal protein S17
YP_004421963.1	[J] COG0093 Ribosomal protein L14
YP_004421964.1	[J] COG0198 Ribosomal protein L24
YP_004421965.1	[J] COG0094 Ribosomal protein L5
YP_004421966.1	[J] COG0096 Ribosomal protein S8
YP_004421967.1	[J] COG0097 Ribosomal protein L6P/L9E
YP_004421968.1	[J] COG0256 Ribosomal protein L18
YP_004421969.1	[J] COG0098 Ribosomal protein S5
YP_004421970.1	[J] COG0200 Ribosomal protein L15
YP_004421971.1	[U] COG0201 Preprotein translocase subunit SecY
YP_004421972.1	[J] COG0099 Ribosomal protein S13
YP_004421973.1	[J] COG0100 Ribosomal protein S11
YP_004421974.1	[K] COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit
YP_004421975.1	[J] COG0203 Ribosomal protein L17
YP_004421976.1	[G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase
YP_004421979.1	[L] COG0817 Holliday junction resolvasome, endonuclease subunit
YP_004421980.1	[L] COG0632 Holliday junction resolvasome, DNA-binding subunit
YP_004421981.1	[F] COG0105 Nucleoside diphosphate kinase
YP_004421982.1	PRIAM ID: PRI001002; [H] COG0095 Lipoate-protein ligase A
YP_004421983.1	[J] COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation
YP_004421984.1	[L] COG0305 Replicative DNA helicase
YP_004421985.1	PRIAM ID: PRI001348; [I] COG0558 Phosphatidylglycerophosphate synthase
YP_004421986.1	[C] COG3202 ATP/ADP translocase
YP_004421987.1	[OU] COG0616 Periplasmic serine proteases (ClpP class)
YP_004421988.1	[L] COG0258 5'-3' exonuclease (including N-terminal domain of PolI)
YP_004421989.1	[H] COG0237 Dephospho-CoA kinase
YP_004421990.1	[C] COG0055 F0F1-type ATP synthase, beta subunit
YP_004421992.1	PRIAM ID: PRI000916; [F] COG0461 Orotate phosphoribosyltransferase
YP_004421993.1	[MJ] COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
YP_004421994.1	[R] COG1768 Predicted phosphohydrolase
YP_004421995.1	[L] COG0742 N6-adenine-specific methylase
YP_004421996.1	[ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
YP_004421997.1	[H] COG0276 Protoheme ferro-lyase (ferrochelatase)
YP_004421998.1	[R] COG0457 FOG: TPR repeat
YP_004422001.1	[E] COG4166 ABC-type oligopeptide transport system, periplasmic component
YP_004422002.1	[EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
YP_004422003.1	[EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
YP_004422004.1	PRIAM ID: PRI001055; [L] COG0350 Methylated DNA-protein cysteine methyltransferase
YP_004422005.1	[S] COG2849 Uncharacterized protein conserved in bacteria
YP_004422006.1	[J] COG0072 Phenylalanyl-tRNA synthetase beta subunit
YP_004422008.1	[S] COG1723 Uncharacterized conserved protein
YP_004422010.1	[L] COG1381 Recombinational DNA repair protein (RecF pathway)
YP_004422012.1	[J] COG1544 Weakly similar to Desulfurispirillum indicum ribosomal subunit interface protein
YP_004422013.1	[QK] COG3284 Transcriptional activator of acetoin/glycerol metabolism
YP_004422014.1	[L] COG0419 ATPase involved in DNA repair
YP_004422015.1	PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase
YP_004422018.1	[J] COG0101 Pseudouridylate synthase
YP_004422019.1	[I] COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase
YP_004422020.1	[R] COG1408 Predicted phosphohydrolases
YP_004422021.1	[B] COG5531 SWIB-domain-containing proteins implicated in chromatin remodeling
YP_004422022.1	[J] COG1186 Protein chain release factor B
YP_004422023.1	[R] COG0456 Acetyltransferases
YP_004422025.1	[S] COG0217 Uncharacterized conserved protein
YP_004422027.1	[M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase
YP_004422028.1	[J] COG0018 Arginyl-tRNA synthetase
YP_004422029.1	PRIAM ID: PRI000175; [I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase
YP_004422030.1	[F] COG1102 Cytidylate kinase
YP_004422031.1	PRIAM ID: PRI001480; [I] COG0575 CDP-diglyceride synthetase
YP_004422032.1	[I] COG0020 Undecaprenyl pyrophosphate synthase
YP_004422034.1	[U] COG0341 Preprotein translocase subunit SecF
YP_004422035.1	[L] COG0608 Single-stranded DNA-specific exonuclease
YP_004422037.1	Early upstream open reading frame
YP_004422038.1	[J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases
YP_004422041.1	[K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit
YP_004422042.1	PRIAM ID: PRI000477; [M] COG0793 Periplasmic protease
YP_004422045.1	[J] COG0048 Ribosomal protein S12
YP_004422046.1	[J] COG0049 Ribosomal protein S7
YP_004422047.1	[T] COG1217 Predicted membrane GTPase involved in stress response
YP_004422048.1	[J] COG0051 Ribosomal protein S10
YP_004422049.1	PRIAM ID: PRI003776; [P] COG0369 Sulfite reductase, alpha subunit (flavoprotein)
YP_004422050.1	[I] COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
YP_004422052.1	[J] COG0261 Ribosomal protein L21
YP_004422053.1	[J] COG0211 Ribosomal protein L27
YP_004422054.1	[J] COG0012 Predicted GTPase, probable translation factor
YP_004422055.1	PRIAM ID: PRI001821; [PH] COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components
YP_004422056.1	[P] COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin
YP_004422057.1	[H] COG0352 Thiamine monophosphate synthase
YP_004422058.1	PRIAM ID: PRI001582; [H] COG2145 Hydroxyethylthiazole kinase, sugar kinase family
YP_004422063.1	[E] COG1115 Na+/alanine symporter
YP_004422064.1	[MU] COG0597 Lipoprotein signal peptidase
YP_004422065.1	[T] COG1734 DnaK suppressor protein
YP_004422066.1	[K] COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
YP_004422067.1	[H] COG0307 Riboflavin synthase alpha chain
YP_004422068.1	PRIAM ID: PRI001540; [R] COG1092 Predicted SAM-dependent methyltransferases
YP_004422069.1	PRIAM ID: PRI003792; [J] COG0566 rRNA methylases
YP_004422070.1	[M] COG1663 Tetraacyldisaccharide-1-P 4'-kinase
YP_004422071.1	[C] COG1301 Na+/H+-dicarboxylate symporters
YP_004422072.1	[C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
YP_004422073.1	PRIAM ID: PRI001621; [R] COG0517 FOG: CBS domain
YP_004422076.1	[H] COG1587 Uroporphyrinogen-III synthase
YP_004422077.1	[E] COG0112 Glycine/serine hydroxymethyltransferase
YP_004422078.1	PRIAM ID: PRI000206; [OU] COG0740 Protease subunit of ATP-dependent Clp proteases
YP_004422079.1	[E] COG0253 Diaminopimelate epimerase
YP_004422081.1	[QR] COG0500 SAM-dependent methyltransferases
YP_004422082.1	[R] COG1427 Predicted periplasmic solute-binding protein
YP_004422083.1	[H] COG0502 Biotin synthase and related enzymes
YP_004422086.1	[T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
YP_004422087.1	[R] COG1253 Hemolysins and related proteins containing CBS domains
YP_004422088.1	[R] COG0319 Predicted metal-dependent hydrolase
YP_004422091.1	[S] COG2928 Uncharacterized conserved protein
YP_004422092.1	PRIAM ID: PRI000774; [L] COG2094 3-methyladenine DNA glycosylase
YP_004422093.1	PRIAM ID: PRI002035; [K] COG0557 Exoribonuclease R
YP_004422094.1	[D] COG1077 Actin-like ATPase involved in cell morphogenesis
YP_004422095.1	[O] COG0576 Molecular chaperone GrpE (heat shock protein)
YP_004422096.1	[K] COG1420 Transcriptional regulator of heat shock gene
YP_004422097.1	[J] COG0441 Threonyl-tRNA synthetase
YP_004422100.1	[S] COG1872 Uncharacterized conserved protein
YP_004422101.1	[R] COG2984 Similar to Chlamydia trachomatis ABC transporter substrate-binding component
YP_004422102.1	[E] COG0436 Aspartate/tyrosine/aromatic aminotransferase
YP_004422103.1	[L] COG0556 Helicase subunit of the DNA excision repair complex
YP_004422105.1	[R] COG1611 Predicted Rossmann fold nucleotide-binding protein
YP_004422106.1	[S] COG4286 Uncharacterized conserved protein related to MYG1 family
YP_004422107.1	[FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
YP_004422110.1	[R] COG4147 Predicted symporter
YP_004422112.1	[M] COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase
YP_004422114.1	[ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
YP_004422116.1	PRIAM ID: PRI002023; [R] COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III
YP_004422117.1	[R] COG0536 Predicted GTPase
YP_004422118.1	[C] COG1032 Fe-S oxidoreductase
YP_004422120.1	[G] COG0366 Glycosidases
YP_004422139.1	[S] COG2155 Uncharacterized conserved protein
YP_004422140.1	[J] COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit
YP_004422141.1	PRIAM ID: PRI000288; [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases
YP_004422142.1	[J] COG2511 Archaeal Glu-tRNAGln amidotransferase subunit E (contains GAD domain)
YP_004422146.1	[L] COG0164 Ribonuclease HIII
YP_004422147.1	[S] COG1426 Uncharacterized protein conserved in bacteria
YP_004422153.1	[O] COG1331 Highly conserved protein containing a thioredoxin domain
YP_004422155.1	[J] COG0030 Dimethyladenosine transferase (rRNA methylation)
YP_004422156.1	[G] COG3959 Transketolase, N-terminal subunit
YP_004422158.1	PRIAM ID: PRI002290; [L] COG1722 Exonuclease VII small subunit
YP_004422159.1	[L] COG1570 Exonuclease VII large subunit
YP_004422160.1	[G] COG0149 Triosephosphate isomerase
YP_004422161.1	[U] COG1314 Preprotein translocase subunit SecG
YP_004422162.1	[J] COG0242 N-formylmethionyl-tRNA deformylase
YP_004422163.1	[U] COG1314 Preprotein translocase subunit SecG
YP_004422165.1	[D] COG0424 Nucleotide-binding protein implicated in inhibition of septum formation
YP_004422166.1	PRIAM ID: PRI001817; [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains
YP_004422167.1	[L] COG0582 Integrase
YP_004422168.1	[R] COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III
YP_004422169.1	Similar to Chlamydophila aborts putative serine-rich exported
YP_004422170.1	[O] COG0542 ATPases with chaperone activity, ATP-binding subunit
YP_004422171.1	PRIAM ID: PRI001024; [O] COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone
YP_004422172.1	[J] COG0828 Ribosomal protein S21
YP_004422173.1	[O] COG2214 DnaJ-class molecular chaperone
YP_004422176.1	[R] COG0658 Predicted membrane metal-binding protein
YP_004422178.1	[G] COG1925 Phosphotransferase system, HPr-related proteins
YP_004422179.1	[G] COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
YP_004422180.1	[S] COG0718 Uncharacterized protein conserved in bacteria
YP_004422181.1	[L] COG0470 ATPase involved in DNA replication
YP_004422182.1	PRIAM ID: PRI001545; [R] COG1480 Predicted membrane-associated HD superfamily hydrolase
YP_004422186.1	PRIAM ID: PRI000889; [H] COG0181 Porphobilinogen deaminase
YP_004422187.1	[O] COG1067 Predicted ATP-dependent protease
YP_004422188.1	[K] COG0571 dsRNA-specific ribonuclease
YP_004422190.1	PRIAM ID: PRI001632; [G] COG1109 Phosphomannomutase
YP_004422191.1	[P] COG0605 Superoxide dismutase
YP_004422192.1	[I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
YP_004422193.1	[F] COG0717 Deoxycytidine deaminase
YP_004422194.1	[GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
YP_004422195.1	[GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
YP_004422199.1	[S] COG3027 Uncharacterized protein conserved in bacteria
YP_004422200.1	[H] COG0171 NAD synthase
YP_004422201.1	[O] COG1219 ATP-dependent protease Clp, ATPase subunit
YP_004422202.1	[H] COG0095 Lipoate-protein ligase A
YP_004422203.1	[I] COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes
YP_004422205.1	[E] COG0509 Glycine cleavage system H protein (lipoate-binding)
YP_004422208.1	[C] COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE
YP_004422209.1	[C] COG2209 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE
YP_004422210.1	[C] COG2869 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC
YP_004422211.1	[O] COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component
YP_004422213.1	[M] COG1664 Integral membrane protein CcmA involved in cell shape determination
YP_004422214.1	[L] COG0593 ATPase involved in DNA replication initiation
YP_004422215.1	[R] COG0457 FOG: TPR repeat
YP_004422217.1	[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
YP_004422219.1	PRIAM ID: PRI001033; [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2
YP_004422221.1	[H] COG0285 Folylpolyglutamate synthase
YP_004422222.1	PRIAM ID: PRI001032; [M] COG0860 N-acetylmuramoyl-L-alanine amidase
YP_004422223.1	[L] COG0776 Bacterial nucleoid DNA-binding protein
YP_004422225.1	[L] COG0582 Integrase
YP_004422226.1	PRIAM ID: PRI002426; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components
YP_004422227.1	Weakly similar to Corynebacterium aurimucosum 5'-methylthioadenosine nucleosidase/S- adenosylhomocysteine nucleosidase
YP_004422228.1	[R] COG2107 Predicted periplasmic solute-binding protein
YP_004422229.1	PRIAM ID: PRI000724
YP_004422230.1	[S] COG5465 uncharacterized conserved protein
YP_004422231.1	[N] COG3190 Flagellar biogenesis protein
YP_004422232.1	[R] COG0561 Predicted hydrolases of the HAD superfamily
YP_004422233.1	PRIAM ID: PRI000095; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
YP_004422236.1	[J] COG0564 Pseudouridylate synthases, 23S RNA-specific
YP_004422237.1	[L] COG2231 Uncharacterized protein related to Endonuclease III
YP_004422238.1	[R] COG1694 Predicted pyrophosphatase; Similar to Chlamydophila caviae mazG protein CCA00393
YP_004422239.1	[R] COG1266 Predicted metal-dependent membrane protease
YP_004422245.1	[T] COG0631 Serine/threonine protein phosphatase
YP_004422246.1	[E] COG0520 Selenocysteine lyase
YP_004422247.1	[P] COG4535 Putative Mg2+ and Co2+ transporter CorC
YP_004422248.1	[R] COG1253 Hemolysins and related proteins containing CBS domains
YP_004422250.1	[F] COG0717 Deoxycytidine deaminase
YP_004422251.1	[L] COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase
YP_004422253.1	PRIAM ID: PRI003748; [G] COG0296 1,4-alpha-glucan branching enzyme
YP_004422254.1	[K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit
YP_004422255.1	[L] COG0629 Single-stranded DNA-binding protein
YP_004422256.1	PRIAM ID: PRI001506; [E] COG0260 Leucyl aminopeptidase
YP_004422257.1	[K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit
YP_004422258.1	[L] COG1466 DNA polymerase III, delta subunit
YP_004422259.1	[R] COG0313 Predicted methyltransferases
YP_004422263.1	PRIAM ID: PRI000715; [H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
YP_004422265.1	[C] COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
YP_004422266.1	[C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
YP_004422267.1	Similar to Chlamydia trachomatis multicopper polyphenol oxidase
YP_004422268.1	[I] COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis
YP_004422272.1	[C] COG0633 Ferredoxin
YP_004422273.1	[U] COG4789 Type III secretory pathway, component EscV
YP_004422274.1	[K] COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
YP_004422276.1	[J] COG0162 Tyrosyl-tRNA synthetase
YP_004422277.1	[I] COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
YP_004422278.1	[J] COG0480 Translation elongation factors (GTPases)
YP_004422280.1	[C] COG3202 ATP/ADP translocase
YP_004422282.1	[P] COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin
YP_004422283.1	[V] COG1131 ABC-type multidrug transport system, ATPase component
YP_004422284.1	[P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components
YP_004422285.1	[P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components
YP_004422286.1	[I] COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase
YP_004422287.1	[M] COG0750 Predicted membrane-associated Zn-dependent proteases 1
YP_004422289.1	[L] COG0419 ATPase involved in DNA repair
YP_004422290.1	[L] COG0592 DNA polymerase sliding clamp subunit (PCNA homolog)
YP_004422291.1	[O] COG0691 tmRNA-binding protein
YP_004422292.1	[H] COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis
YP_004422293.1	PRIAM ID: PRI001953; [H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
YP_004422294.1	[M] COG2891 Cell shape-determining protein
YP_004422295.1	[K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit
YP_004422298.1	PRIAM ID: PRI004694; [I] COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes
YP_004422299.1	[H] COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases
YP_004422300.1	[J] COG0227 Ribosomal protein L28
YP_004422301.1	[G] COG1640 4-alpha-glucanotransferase
YP_004422302.1	[K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit
YP_004422303.1	putative lid of Chlamydophila psittaci type III secretion system; similar to Chlamydophila caviae CopN CCA00458 and to Chlamydophila pneumoniae LcrE CPn0324
YP_004422305.1	[S] COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FlhB
YP_004422306.1	[R] COG1163 Predicted GTPase
YP_004422307.1	[H] COG0196 FAD synthase
YP_004422308.1	[J] COG0130 Pseudouridine synthase
YP_004422309.1	[J] COG0858 Ribosome-binding factor A
YP_004422310.1	[T] COG1217 Predicted membrane GTPase involved in stress response
YP_004422311.1	[K] COG0195 Transcription elongation factor
YP_004422313.1	[C] COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
YP_004422314.1	[I] COG0736 Phosphopantetheinyl transferase (holo-ACP synthase)
YP_004422316.1	[M] COG0682 Prolipoprotein diacylglyceryltransferase
YP_004422317.1	[U] COG0706 Preprotein translocase subunit YidC
YP_004422318.1	[L] COG1484 DNA replication protein
YP_004422320.1	PRIAM ID: PRI001558; [G] COG0058 Glucan phosphorylase
YP_004422321.1	[C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
YP_004422322.1	PRIAM ID: PRI001217; [HI] COG1154 Deoxyxylulose-5-phosphate synthase
YP_004422323.1	[C] COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes
YP_004422325.1	[M] COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
YP_004422326.1	[M] COG2825 Similar to Chlamydophila pneumoniae cationic outer membrane protein OmpH
YP_004422327.1	[M] COG0729 Outer membrane protein; putative omp85 analog
YP_004422328.1	[L] COG0353 Recombinational DNA repair protein (RecF pathway)
YP_004422329.1	PRIAM ID: PRI001373; [I] COG3425 3-hydroxy-3-methylglutaryl CoA synthase
YP_004422330.1	[I] COG0331 (acyl-carrier-protein) S-malonyltransferase
YP_004422331.1	[IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
YP_004422332.1	[IQ] COG0236 Acyl carrier protein
YP_004422333.1	[T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
YP_004422336.1	[K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit
YP_004422337.1	[R] COG0733 Na+-dependent transporters of the SNF family
YP_004422338.1	[C] COG1301 Na+/H+-dicarboxylate symporters
YP_004422340.1	[R] COG0457 FOG: TPR repeat
YP_004422341.1	[R] COG0517 FOG: CBS domain
YP_004422343.1	[E] COG1113 Gamma-aminobutyrate permease and related permeases
YP_004422344.1	[G] COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes
YP_004422346.1	PRIAM ID: PRI001823; [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase
YP_004422347.1	[P] COG3639 ABC-type phosphate/phosphonate transport system, permease component
YP_004422348.1	[P] COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen
YP_004422351.1	[L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
YP_004422352.1	[L] COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
YP_004422353.1	[F] COG0125 Thymidylate kinase
YP_004422354.1	PRIAM ID: PRI001554; [L] COG2812 DNA polymerase III, gamma/tau subunits
YP_004422355.1	[R] COG0400 Predicted esterase
YP_004422356.1	[J] COG0009 Putative translation factor (SUA5)
YP_004422357.1	PRIAM ID: PRI000862; [E] COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog
YP_004422360.1	[R] COG1611 Weakly similar to Actinomycetes urogenitalis Rossmann fold nucleotide-binding protein
YP_004422361.1	[H] COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases
YP_004422362.1	[H] COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase
YP_004422363.1	[S] COG1284 Uncharacterized conserved protein
YP_004422364.1	[R] COG0496 Predicted acid phosphatase
YP_004422365.1	[D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
YP_004422366.1	[U] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)
YP_004422370.1	PRIAM ID: PRI000715; [C] COG1032 Fe-S oxidoreductase
YP_004422371.1	[J] COG0267 Ribosomal protein L33
YP_004422372.1	[V] COG0577 ABC-type antimicrobial peptide transport system, permease component
YP_004422373.1	[E] COG0241 Histidinol phosphatase and related phosphatases
YP_004422375.1	[J] COG0102 Ribosomal protein L13
YP_004422376.1	[J] COG0103 Ribosomal protein S9
YP_004422377.1	[M] COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
YP_004422378.1	PRIAM ID: PRI000273; [F] COG0563 Adenylate kinase and related kinases
YP_004422382.1	[G] COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
YP_004422383.1	[G] COG0364 Glucose-6-phosphate 1-dehydrogenase
YP_004422384.1	[R] COG0523 Putative GTPases (G3E family)
YP_004422385.1	PRIAM ID: PRI001024; [O] COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone
YP_004422386.1	[K] COG1438 Arginine repressor
YP_004422387.1	[E] COG0765 ABC-type amino acid transport system, permease component
YP_004422388.1	PRIAM ID: PRI001823; [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase
YP_004422391.1	[S] COG1295 Predicted membrane protein
YP_004422392.1	[QR] COG0500 SAM-dependent methyltransferases
YP_004422393.1	Chlamydophila psittaci inclusion membrane protein A; similar to Chlamydophila caviae IncA CCA00550 and to Chlamydophila pneumoniae CPn0186
YP_004422394.1	[G] COG0036 Pentose-5-phosphate-3-epimerase
YP_004422395.1	[J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
YP_004422396.1	[I] COG0511 Biotin carboxyl carrier protein
YP_004422397.1	[EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ)
YP_004422407.1	[K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit
YP_004422409.1	PRIAM ID: PRI000245; [F] COG1816 Adenosine deaminase
YP_004422410.1	[EF] COG0505 Carbamoylphosphate synthase small subunit
YP_004422411.1	PRIAM ID: PRI002146; [R] COG2070 Dioxygenases related to 2-nitropropane dioxygenase
YP_004422413.1	The only data base matches are to predicted Chlamydophila proteins
YP_004422417.1	[S] COG1738 Uncharacterized conserved protein
YP_004422418.1	[J] COG0343 Queuine/archaeosine tRNA-ribosyltransferase
YP_004422422.1	[O] COG1495 Disulfide bond formation protein DsbB
YP_004422423.1	[O] COG1651 Protein-disulfide isomerase
YP_004422426.1	PRIAM ID: PRI003356; [E] COG1125 ABC-type proline/glycine betaine transport systems, ATPase components
YP_004422427.1	PRIAM ID: PRI002015; [F] COG0775 Nucleoside phosphorylase
YP_004422429.1	[M] COG1083 CMP-N-acetylneuraminic acid synthetase
YP_004422430.1	[R] COG2071 Predicted glutamine amidotransferases
YP_004422431.1	[L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)
YP_004422432.1	[E] COG0747 ABC-type dipeptide transport system, periplasmic component
YP_004422433.1	[E] COG0747 ABC-type dipeptide transport system, periplasmic component
YP_004422434.1	[E] COG4166 ABC-type oligopeptide transport system, periplasmic component
YP_004422435.1	[R] COG4174 ABC-type uncharacterized transport system, permease component
YP_004422436.1	[EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
YP_004422437.1	PRIAM ID: PRI001824; [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase
YP_004422438.1	PRIAM ID: PRI001824; [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase
YP_004422440.1	[P] COG0471 Di- and tricarboxylate transporters
YP_004422441.1	[G] COG0205 6-phosphofructokinase
YP_004422442.1	[R] COG1073 Hydrolases of the alpha/beta superfamily
YP_004422443.1	[G] COG0205 6-phosphofructokinase
YP_004422444.1	[M] COG1519 3-deoxy-D-manno-octulosonic-acid transferase
YP_004422445.1	[J] COG0525 Valyl-tRNA synthetase
YP_004422446.1	[R] COG1073 Hydrolases of the alpha/beta superfamily
YP_004422447.1	PRIAM ID: PRI002705; [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
YP_004422449.1	[R] COG5275 BRCT domain type II
YP_004422450.1	PRIAM ID: PRI001200; [RTKL] COG0515 Serine/threonine protein kinase
YP_004422455.1	[S] COG2912 Uncharacterized conserved protein
YP_004422459.1	[O] COG0542 ATPases with chaperone activity, ATP-binding subunit
YP_004422461.1	PRIAM ID: PRI003356; [P] COG1135 ABC-type metal ion transport system, ATPase component
YP_004422462.1	[Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component
YP_004422463.1	PRIAM ID: PRI003665; [E] COG4992 Ornithine/acetylornithine aminotransferase
YP_004422464.1	[K] COG1678 Putative transcriptional regulator
YP_004422465.1	[S] COG1259 Uncharacterized conserved protein
YP_004422466.1	[G] COG0120 Ribose 5-phosphate isomerase
YP_004422470.1	[S] COG0327 Uncharacterized conserved protein
YP_004422471.1	[E] COG1164 Oligoendopeptidase F
YP_004422472.1	[O] COG0234 Co-chaperonin GroES (HSP10)
YP_004422473.1	[O] COG0459 Chaperonin GroEL (HSP60 family)
YP_004422476.1	PRIAM ID: PRI001178; [S] COG4285 Uncharacterized conserved protein
YP_004422477.1	[GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily
YP_004422478.1	PRIAM ID: PRI001958; [L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
YP_004422479.1	[J] COG0525 Valyl-tRNA synthetase
YP_004422481.1	[F] COG0194 Guanylate kinase
YP_004422482.1	PRIAM ID: PRI001902; [L] COG0164 Ribonuclease HII
YP_004422483.1	[J] COG0335 Ribosomal protein L19
YP_004422485.1	[J] COG0228 Ribosomal protein S16
YP_004422486.1	[N] COG1419 Flagellar GTP-binding protein
YP_004422487.1	[J] COG2813 16S RNA G1207 methylase RsmC
YP_004422488.1	[J] COG1186 Protein chain release factor B
YP_004422489.1	[J] COG0254 Ribosomal protein L31
YP_004422491.1	[U] COG0681 Signal peptidase I
YP_004422492.1	[J] COG0495 Leucyl-tRNA synthetase
YP_004422494.1	[T] COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH
YP_004422497.1	The only homolog among Chlamydiaceae is Chlamydophila abortus hypothetical protein CAB639; Weakly similar to predicted proteins of Oryza sativa, Zea mays, and Arabidopsis lyrata
YP_004422498.1	[C] COG1294 Cytochrome bd-type quinol oxidase, subunit 2
YP_004422499.1	[C] COG1271 Cytochrome bd-type quinol oxidase, subunit 1
YP_004422500.1	[S] COG1624 Uncharacterized conserved protein
YP_004422502.1	[M] COG1560 Lauroyl/myristoyl acyltransferase
YP_004422504.1	[G] COG0469 Pyruvate kinase
YP_004422505.1	[V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component
YP_004422506.1	[RTKL] COG0515 Serine/threonine protein kinase
YP_004422507.1	[J] COG0060 Isoleucyl-tRNA synthetase
YP_004422509.1	[C] COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K
YP_004422510.1	[C] COG1269 Archaeal/vacuolar-type H+-ATPase subunit I
YP_004422511.1	[C] COG1394 Archaeal/vacuolar-type H+-ATPase subunit D
YP_004422513.1	PRIAM ID: PRI004206; [NU] COG1157 Flagellar biosynthesis/type III secretory pathway ATPase
YP_004422515.1	[C] COG2811 Archaeal/vacuolar-type H+-ATPase subunit H
YP_004422518.1	[G] COG0176 Transaldolase
YP_004422519.1	[K] COG0086 DNA-directed RNA polymerase, beta subunit/160 kD subunit
YP_004422520.1	[K] COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit
YP_004422521.1	[J] COG0222 Ribosomal protein L7/L12
YP_004422522.1	[J] COG0244 Ribosomal protein L10
YP_004422523.1	[J] COG0081 Ribosomal protein L1
YP_004422524.1	[J] COG0080 Ribosomal protein L11
YP_004422525.1	[K] COG0250 Transcription antiterminator
YP_004422526.1	[U] COG0690 Preprotein translocase subunit SecE
YP_004422527.1	[J] COG3276 Selenocysteine-specific translation elongation factor
YP_004422528.1	[J] COG0361 Translation initiation factor 1 (IF-1)
YP_004422530.1	[R] COG2166 SufE protein probably involved in Fe-S center assembly
YP_004422531.1	[R] COG1268 Uncharacterized conserved protein; Similar to Chlamydia muridarum BioY family protein TC0638
YP_004422536.1	[EM] COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase
YP_004422537.1	PRIAM ID: PRI003950; [E] COG0527 Aspartokinases
YP_004422538.1	[E] COG0136 Aspartate-semialdehyde dehydrogenase
YP_004422539.1	PRIAM ID: PRI001090; [E] COG0289 Dihydrodipicolinate reductase
YP_004422540.1	PRIAM ID: PRI000460; [E] COG3186 Phenylalanine-4-hydroxylase
YP_004422541.1	[S] COG1738 Uncharacterized conserved protein
YP_004422542.1	Weakly similar to Chlamydia trachomatis glycogen branching protein CT867
YP_004422543.1	PRIAM ID: PRI000092; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
YP_004422544.1	[HR] COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
YP_004422545.1	[H] COG0156 7-keto-8-aminopelargonate synthetase and related enzymes
YP_004422546.1	[H] COG0132 Dethiobiotin synthetase
YP_004422547.1	[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
YP_004422549.1	[M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase
YP_004422550.1	PRIAM ID: PRI000269; [E] COG0703 Shikimate kinase
YP_004422551.1	[E] COG0082 Chorismate synthase
YP_004422552.1	[E] COG0337 3-dehydroquinate synthetase
YP_004422553.1	[E] COG0710 3-dehydroquinate dehydratase
YP_004422556.1	PRIAM ID: PRI003191
YP_004422557.1	[E] COG0531 Amino acid transporters
YP_004422558.1	PRIAM ID: PRI001754; [E] COG0665 Glycine/D-amino acid oxidases (deaminating)
YP_004422560.1	PRIAM ID: PRI004501; [C] COG0039 Malate/lactate dehydrogenases
YP_004422561.1	[K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit
YP_004422562.1	PRIAM ID: PRI000487; [G] COG0166 Glucose-6-phosphate isomerase
YP_004422563.1	[L] COG0582 Integrase
YP_004422566.1	[R] COG0457 FOG: TPR repeat
YP_004422569.1	[QR] COG0500 SAM-dependent methyltransferases
YP_004422570.1	[IM] COG0761 Penicillin tolerance protein
YP_004422571.1	Similar to Chlamydophila pneumoniae S42 family peptidase
YP_004422572.1	[P] COG1055 Na+/H+ antiporter NhaD and related arsenite permeases
YP_004422573.1	[P] COG0659 Sulfate permease and related transporters (MFS superfamily)
YP_004422575.1	[E] COG4176 ABC-type proline/glycine betaine transport system, permease component
YP_004422576.1	[U] COG2095 Multiple antibiotic transporter
YP_004422577.1	[U] COG2095 Multiple antibiotic transporter
YP_004422578.1	[E] COG0006 Xaa-Pro aminopeptidase
YP_004422586.1	PRIAM ID: PRI001166; [H] COG0117 Pyrimidine deaminase
YP_004422587.1	[J] COG0184 Ribosomal protein S15P/S13E
YP_004422588.1	[J] COG1098 Predicted RNA binding protein (contains ribosomal protein S1 domain)
YP_004422589.1	PRIAM ID: PRI001472; [O] COG0464 ATPases of the AAA+ class
YP_004422590.1	[D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
YP_004422591.1	[R] COG0795 Predicted permeases
YP_004422592.1	[R] COG0795 Predicted permeases
YP_004422594.1	[J] COG2024 Phenylalanyl-tRNA synthetase alpha subunit (archaeal type)
YP_004422595.1	[J] COG0292 Ribosomal protein L20
YP_004422596.1	[J] COG0291 Ribosomal protein L35
YP_004422597.1	[J] COG0290 Translation initiation factor 3 (IF-3)
YP_004422598.1	[K] COG0781 Transcription termination factor
YP_004422599.1	[M] COG0812 UDP-N-acetylmuramate dehydrogenase
YP_004422600.1	[QR] COG0500 SAM-dependent methyltransferases
YP_004422601.1	[R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase
YP_004422602.1	PRIAM ID: PRI000329; [F] COG0208 Ribonucleotide reductase, beta subunit
YP_004422603.1	[F] COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase
YP_004422604.1	PRIAM ID: PRI001347; [I] COG1183 Phosphatidylserine synthase
YP_004422605.1	[S] COG1322 Similar to RmuC domain-containing protein
YP_004422606.1	[O] COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like
YP_004422607.1	PRIAM ID: PRI000640; [E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
YP_004422608.1	PRIAM ID: PRI001044; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
YP_004422609.1	[C] COG1042 Acyl-CoA synthetase (NDP forming)
YP_004422610.1	[C] COG0045 Succinyl-CoA synthetase, beta subunit
YP_004422611.1	[N] COG1419 Flagellar GTP-binding protein
YP_004422612.1	[R] COG0670 Integral membrane protein, interacts with FtsH
YP_004422613.1	[E] COG0531 Amino acid transporters
YP_004422614.1	[M] COG2222 Predicted phosphosugar isomerases
YP_004422615.1	[G] COG0033 Phosphoglucomutase
YP_004422616.1	PRIAM ID: PRI000787; [J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase
YP_004422617.1	[S] COG3952 Predicted membrane protein
YP_004422621.1	[D] COG1196 Chromosome segregation ATPases
YP_004422623.1	[D] COG1196 Chromosome segregation ATPases; Only significant data base matches to Chlamydophila caviae CCA00799 and Chlamydophila felis mhcB1
YP_004422624.1	[D] COG1196 Chromosome segregation ATPases
YP_004422630.1	[I] COG0416 Fatty acid/phospholipid biosynthesis enzyme
YP_004422631.1	[J] COG0268 Ribosomal protein S20
YP_004422633.1	PRIAM ID: PRI000128; [J] COG1530 Ribonucleases G and E
YP_004422634.1	[K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit
YP_004422635.1	PRIAM ID: PRI000705; [R] COG0612 Predicted Zn-dependent peptidases
YP_004422638.1	[I] COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase
YP_004422639.1	[J] COG0359 Ribosomal protein L9
YP_004422640.1	[J] COG0238 Ribosomal protein S18
YP_004422641.1	[J] COG0360 Ribosomal protein S6
YP_004422642.1	[J] COG0193 Peptidyl-tRNA hydrolase
YP_004422643.1	[J] COG1825 Ribosomal protein L25 (general stress protein Ctc)
YP_004422644.1	PRIAM ID: PRI001170; [G] COG0297 Glycogen synthase
YP_004422645.1	PRIAM ID: PRI001348; [I] COG0558 Phosphatidylglycerophosphate synthase
YP_004422646.1	[J] COG0752 Glycyl-tRNA synthetase, alpha subunit
YP_004422651.1	[L] COG0358 DNA primase (bacterial type)
YP_004422652.1	[J] COG0233 Ribosome recycling factor
YP_004422653.1	[L] COG0322 Nuclease subunit of the excinuclease complex
YP_004422655.1	[J] COG0199 Ribosomal protein S14
YP_004422656.1	[J] COG0257 Ribosomal protein L36
YP_004422657.1	[OC] COG0526 Thiol-disulfide isomerase and thioredoxins
YP_004422659.1	[J] COG0215 Cysteinyl-tRNA synthetase
YP_004422660.1	[J] COG0017 Aspartyl/asparaginyl-tRNA synthetases
YP_004422661.1	PRIAM ID: PRI001830; [O] COG1331 Highly conserved protein containing a thioredoxin domain
YP_004422663.1	[L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase
YP_004422664.1	PRIAM ID: PRI000173; [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
YP_004422665.1	[I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase
YP_004422666.1	PRIAM ID: PRI001455; [G] COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
YP_004422667.1	[E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase
YP_004422668.1	PRIAM ID: PRI001150; [C] COG0221 Inorganic pyrophosphatase
YP_004422669.1	PRIAM ID: PRI001957; [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
YP_004422670.1	[IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase
YP_004422671.1	[S] COG0799 Uncharacterized homolog of plant Iojap protein
YP_004422672.1	[E] COG0560 Phosphoserine phosphatase
YP_004422674.1	[HR] COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
YP_004422675.1	[J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase
YP_004422676.1	[T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
YP_004422678.1	[P] COG1324 Uncharacterized protein involved in tolerance to divalent cations
YP_004422679.1	[R] COG1837 Predicted RNA-binding protein (contains KH domain)
YP_004422680.1	[M] COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes
YP_004422681.1	PRIAM ID: PRI000420; [M] COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase
YP_004422682.1	[D] COG0772 Bacterial cell division membrane protein
YP_004422683.1	PRIAM ID: PRI002193; [M] COG1388 FOG: LysM repeat; similar to Chlamydia trachomatis muramidase
YP_004422684.1	[M] COG0769 UDP-N-acetylmuramyl tripeptide synthase
YP_004422685.1	[M] COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
YP_004422686.1	PRIAM ID: PRI002602; [M] COG0769 UDP-N-acetylmuramyl tripeptide synthase
YP_004422687.1	[O] COG0459 Chaperonin GroEL (HSP60 family)
YP_004422688.1	[R] COG1409 Predicted phosphohydrolases
YP_004422690.1	[J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
YP_004422691.1	PRIAM ID: PRI001703; [F] COG2820 Uridine phosphorylase
YP_004422692.1	[G] COG3958 Transketolase, C-terminal subunit
YP_004422693.1	[R] COG2872 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain
YP_004422694.1	[L] COG4098 Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein)
YP_004422695.1	[H] COG0407 Uroporphyrinogen-III decarboxylase
YP_004422696.1	[H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
YP_004422697.1	[H] COG1232 Protoporphyrinogen oxidase
YP_004422698.1	[K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit
YP_004422700.1	PRIAM ID: PRI004165; [J] COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase
YP_004422701.1	[U] COG1862 Preprotein translocase subunit YajC
YP_004422702.1	[HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
YP_004422704.1	[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins
YP_004422705.1	PRIAM ID: PRI002023; [R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I
YP_004422706.1	PRIAM ID: PRI001933; [R] COG2940 Proteins containing SET domain
YP_004422707.1	[R] COG1881 Phospholipid-binding protein
YP_004422708.1	[E] COG1115 Na+/alanine symporter
YP_004422711.1	[H] COG0054 Riboflavin synthase beta-chain
YP_004422713.1	[FJ] COG0590 Cytosine/adenosine deaminases
YP_004422714.1	[J] COG0442 Prolyl-tRNA synthetase
YP_004422715.1	[S] COG1814 Uncharacterized membrane protein
YP_004422716.1	[P] COG2217 Cation transport ATPase
YP_004422717.1	[D] COG0772 Bacterial cell division membrane protein
YP_004422718.1	PRIAM ID: PRI001182; [H] COG0340 Biotin-(acetyl-CoA carboxylase) ligase
YP_004422720.1	[J] COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases
YP_004422721.1	PRIAM ID: PRI000555; [G] COG0406 Fructose-2,6-bisphosphatase
YP_004422722.1	PRIAM ID: PRI001260; [E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes
YP_004422723.1	[C] COG0822 NifU homolog involved in Fe-S cluster formation
YP_004422724.1	[N] COG1536 Flagellar motor switch protein
YP_004422726.1	[C] COG0056 F0F1-type ATP synthase, alpha subunit
YP_004422728.1	PRIAM ID: PRI002941; [G] COG4284 UDP-glucose pyrophosphorylase
YP_004422729.1	[C] COG0240 Glycerol-3-phosphate dehydrogenase
YP_004422733.1	[C] COG1274 Phosphoenolpyruvate carboxykinase (GTP)
YP_004422734.1	[O] COG0443 Molecular chaperone
YP_004422735.1	[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family
YP_004422736.1	[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
YP_004422737.1	PRIAM ID: PRI000206; [OU] COG0740 Protease subunit of ATP-dependent Clp proteases
YP_004422738.1	[O] COG1222 ATP-dependent 26S proteasome regulatory subunit
YP_004422739.1	PRIAM ID: PRI000606; [J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase
YP_004422740.1	[R] COG1160 Predicted GTPases
YP_004422742.1	[U] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)
YP_004422743.1	[R] COG0457 FOG: TPR repeat
YP_004422744.1	[I] COG0688 Phosphatidylserine decarboxylase
YP_004422745.1	[R] COG1160 Predicted GTPases
YP_004422746.1	PRIAM ID: PRI001213; [L] COG1194 A/G-specific DNA glycosylase
YP_004422747.1	[E] COG1114 Branched-chain amino acid permeases
YP_004422748.1	[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family
YP_004422750.1	[C] COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
YP_004422751.1	[H] COG0320 Lipoate synthase
YP_004422752.1	[NU] COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein
YP_004422754.1	putative Chlamydophila psittaci type III secretion system translocase
YP_004422755.1	[NU] COG1338 Flagellar biosynthesis pathway, component FliP
YP_004422756.1	[NU] COG1987 Flagellar biosynthesis pathway, component FliQ; putative structural component of Chlamydophila psittaci type III secretion system; similar to Chlamydophila caviae SctS CCA00939 and to Chlamydophila pneumoniae YscS CPn0824
YP_004422757.1	[U] COG4791 Type III secretory pathway, component EscT
YP_004422762.1	[NU] COG2165 Type II secretory pathway, pseudopilin PulG
YP_004422763.1	[NU] COG1459 Type II secretory pathway, component PulF
YP_004422764.1	[NU] COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis
YP_004422765.1	[U] COG4964 Flp pilus assembly protein, secretin CpaC
YP_004422767.1	PRIAM ID: PRI004710; [E] COG0006 Xaa-Pro aminopeptidase
YP_004422768.1	[L] COG0323 DNA mismatch repair enzyme (predicted ATPase)
YP_004422769.1	[R] COG0457 FOG: TPR repeat
YP_004422772.1	Secretion system effector C (SseC) like family; pfam04888
YP_004422773.1	[GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily
YP_004422774.1	[J] COG0442 Prolyl-tRNA synthetase
YP_004422775.1	[D] COG0455 ATPases involved in chromosome partitioning
YP_004422778.1	[J] COG0162 Tyrosyl-tRNA synthetase
YP_004422779.1	[LK] COG1200 RecG-like helicase
YP_004422780.1	[G] COG0148 Enolase
YP_004422781.1	PRIAM ID: PRI000365; [TK] COG2208 Serine phosphatase RsbU, regulator of sigma subunit
YP_004422782.1	[TK] COG2208 Serine phosphatase RsbU, regulator of sigma subunit
YP_004422784.1	[C] COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit
YP_004422785.1	[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
YP_004422786.1	[C] COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit
YP_004422787.1	Similar to Chlamydophila caviae TatD family deoxyribonuclease
YP_004422788.1	PRIAM ID: PRI001830; [O] COG0785 Cytochrome c biogenesis protein
YP_004422789.1	[U] COG0811 Biopolymer transport proteins
YP_004422790.1	[U] COG0848 Biopolymer transport protein
YP_004422791.1	[M] COG0810 Periplasmic protein TonB, links inner and outer membranes
YP_004422792.1	[U] COG0823 Periplasmic component of the Tol biopolymer transport system
YP_004422793.1	[M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins
YP_004422794.1	PRIAM ID: PRI003497; [M] COG1388 FOG: LysM repeat
YP_004422796.1	[O] COG1225 Peroxiredoxin
YP_004422797.1	[O] COG0459 Chaperonin GroEL (HSP60 family)
YP_004422798.1	[S] COG3876 Uncharacterized protein conserved in bacteria
YP_004422799.1	[F] COG0127 Xanthosine triphosphate pyrophosphatase
YP_004422801.1	[L] COG0692 Uracil DNA glycosylase
YP_004422802.1	[L] COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)
YP_004422803.1	[K] COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog
YP_004422805.1	[L] COG0551 Zn-finger domain associated with topoisomerase type I
YP_004422806.1	[J] COG0042 tRNA-dihydrouridine synthase
YP_004422809.1	[S] COG2849 Uncharacterized protein conserved in bacteria
YP_004422810.1	[H] COG0212 5-formyltetrahydrofolate cyclo-ligase
YP_004422811.1	[L] COG0468 RecA/RadA recombinase
YP_004422812.1	[H] COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C
YP_004422813.1	[S] COG1478 Uncharacterized conserved protein
YP_004422814.1	[H] COG0262 Dihydrofolate reductase
YP_004422815.1	[H] COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
YP_004422816.1	[H] COG1539 Dihydroneopterin aldolase
YP_004422817.1	[L] COG0419 ATPase involved in DNA repair
YP_004422818.1	[Z] COG5022 Myosin heavy chain
YP_004422819.1	[J] COG0268 Ribosomal protein S20
YP_004422821.1	[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
YP_004422823.1	[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
YP_004422824.1	[R] COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
YP_004422825.1	PRIAM ID: PRI001340
YP_004422827.1	[F] COG1351 Predicted alternative thymidylate synthase