-- dump date 20140619_040748 -- class Genbank::CDS -- table cds_note -- id note YP_005665653.1 PRIAM ID: PRI000415; [H] COG0113 Delta-aminolevulinic acid dehydratase YP_005665654.1 [C] COG1726 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA YP_005665656.1 [S] COG1747 Uncharacterized N-terminal domain of the transcription elongation factor GreA YP_005665657.1 PRIAM ID: PRI001239; [E] COG1448 Aspartate/tyrosine/aromatic aminotransferase YP_005665658.1 [M] COG1792 Cell shape-determining protein YP_005665659.1 [L] COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_005665660.1 [L] COG1330 Exonuclease V gamma subunit YP_005665661.1 [GEPR] COG0477 Permeases of the major facilitator superfamily YP_005665662.1 [R] COG1054 Predicted sulfurtransferase YP_005665663.1 [J] COG0522 Ribosomal protein S4 and related proteins YP_005665664.1 PRIAM ID: PRI001476; [L] COG0648 Endonuclease IV YP_005665665.1 [R] COG0728 Uncharacterized membrane protein, putative virulence factor YP_005665671.1 PRIAM ID: PRI001823; [R] COG1137 ABC-type (unclassified) transport system, ATPase component YP_005665673.1 [M] COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_005665674.1 [R] COG1837 Predicted RNA-binding protein (contains KH domain) YP_005665675.1 [J] COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005665678.1 PRIAM ID: PRI001029; [L] COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005665679.1 PRIAM ID: PRI001027; [L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005665680.1 PRIAM ID: PRI004475; [H] COG0373 Glutamyl-tRNA reductase YP_005665683.1 [T] COG1716 FOG: FHA domain YP_005665688.1 [NU] COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_005665691.1 [NU] COG1886 Flagellar motor switch/type III secretory pathway protein YP_005665692.1 [RTKL] COG0515 Serine/threonine protein kinase YP_005665693.1 [NU] COG1450 Type II secretory pathway, component PulD YP_005665694.1 PRIAM ID: PRI000136; [E] COG3869 Arginine kinase YP_005665695.1 [S] COG3880 Uncharacterized protein with conserved CXXC pairs YP_005665696.1 [J] COG0233 Ribosome recycling factor YP_005665697.1 [F] COG0528 Uridylate kinase YP_005665698.1 [J] COG0264 Translation elongation factor Ts YP_005665699.1 [J] COG0052 Ribosomal protein S2 YP_005665702.1 PRIAM ID: PRI001033; [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005665703.1 [R] COG0457 FOG: TPR repeat YP_005665704.1 [O] COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component YP_005665705.1 PRIAM ID: PRI001820; [O] COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component YP_005665706.1 [O] COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component YP_005665707.1 PRIAM ID: PRI001260; [E] COG0520 Selenocysteine lyase YP_005665708.1 [G] COG0726 Predicted xylanase/chitin deacetylase YP_005665710.1 [K] COG1475 Predicted transcriptional regulators YP_005665711.1 PRIAM ID: PRI001824; [E] COG4608 ABC-type oligopeptide transport system, ATPase component YP_005665712.1 PRIAM ID: PRI001824; [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005665713.1 [P] COG1392 Phosphate transport regulator (distant homolog of PhoU) YP_005665714.1 [P] COG0306 Phosphate/sulphate permeases YP_005665715.1 PRIAM ID: PRI000833; [G] COG0126 3-phosphoglycerate kinase YP_005665719.1 PRIAM ID: PRI000037; [J] COG0144 tRNA and rRNA cytosine-C5-methylases YP_005665720.1 PRIAM ID: PRI002190; [M] COG1686 D-alanyl-D-alanine carboxypeptidase YP_005665722.1 [T] COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase) YP_005665726.1 PRIAM ID: PRI000723; [L] COG0587 DNA polymerase III, alpha subunit YP_005665727.1 [L] COG0587 DNA polymerase III subunit alpha YP_005665729.1 [J] COG0124 Histidyl-tRNA synthetase YP_005665730.1 [J] COG0173 Aspartyl-tRNA synthetase YP_005665731.1 PRIAM ID: PRI002210; [O] COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_005665732.1 [J] COG0219 Predicted rRNA methylase (SpoU class) YP_005665733.1 [OC] COG0526 Thiol-disulfide isomerase and thioredoxins YP_005665736.1 [R] COG0802 Predicted ATPase or kinase YP_005665737.1 PRIAM ID: PRI000724; [L] COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_005665738.1 [I] COG1607 Acyl-CoA hydrolase YP_005665739.1 [M] COG0815 Apolipoprotein N-acyltransferase YP_005665740.1 [M] COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_005665741.1 [I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_005665742.1 [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_005665743.1 [J] COG0223 Methionyl-tRNA formyltransferase YP_005665745.1 [J] COG0087 Ribosomal protein L3 YP_005665746.1 [J] COG0088 Ribosomal protein L4 YP_005665747.1 [J] COG0089 Ribosomal protein L23 YP_005665748.1 [J] COG0090 Ribosomal protein L2 YP_005665749.1 [J] COG0185 Ribosomal protein S19 YP_005665750.1 [J] COG0091 Ribosomal protein L22 YP_005665751.1 [J] COG0092 Ribosomal protein S3 YP_005665752.1 [J] COG0197 Ribosomal protein L16/L10E YP_005665753.1 [J] COG0255 Ribosomal protein L29 YP_005665754.1 [J] COG0186 Ribosomal protein S17 YP_005665755.1 [J] COG0093 Ribosomal protein L14 YP_005665756.1 [J] COG0198 Ribosomal protein L24 YP_005665757.1 [J] COG0094 Ribosomal protein L5 YP_005665758.1 [J] COG0096 Ribosomal protein S8 YP_005665759.1 [J] COG0097 Ribosomal protein L6P/L9E YP_005665760.1 [J] COG0256 Ribosomal protein L18 YP_005665761.1 [J] COG0098 Ribosomal protein S5 YP_005665762.1 [J] COG0200 Ribosomal protein L15 YP_005665763.1 [U] COG0201 Preprotein translocase subunit SecY YP_005665764.1 [J] COG0099 Ribosomal protein S13 YP_005665765.1 [J] COG0100 Ribosomal protein S11 YP_005665766.1 [K] COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_005665767.1 [J] COG0203 Ribosomal protein L17 YP_005665768.1 [G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_005665771.1 [L] COG0817 Holliday junction resolvasome, endonuclease subunit YP_005665772.1 [L] COG0632 Holliday junction resolvasome, DNA-binding subunit YP_005665773.1 PRIAM ID: PRI001145; [F] COG0105 Nucleoside diphosphate kinase YP_005665774.1 PRIAM ID: PRI001002; [H] COG0095 Lipoate-protein ligase A YP_005665775.1 [D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_005665776.1 [L] COG0305 Replicative DNA helicase YP_005665777.1 PRIAM ID: PRI001348; [I] COG0558 Phosphatidylglycerophosphate synthase YP_005665778.1 [C] COG3202 ATP/ADP translocase YP_005665779.1 [OU] COG0616 Periplasmic serine proteases (ClpP class) YP_005665780.1 PRIAM ID: PRI000971; [L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains YP_005665781.1 [H] COG0237 Dephospho-CoA kinase YP_005665782.1 [K] COG1158 Transcription termination factor YP_005665784.1 PRIAM ID: PRI000916; [F] COG0461 Orotate phosphoribosyltransferase YP_005665785.1 [G] COG0448 ADP-glucose pyrophosphorylase YP_005665786.1 [R] COG1768 Predicted phosphohydrolase YP_005665787.1 [L] COG0742 N6-adenine-specific methylase YP_005665788.1 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005665789.1 [H] COG0276 Protoheme ferro-lyase (ferrochelatase) YP_005665790.1 [R] COG0457 FOG: TPR repeat YP_005665796.1 [E] COG0747 ABC-type dipeptide transport system, periplasmic component YP_005665797.1 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005665798.1 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005665799.1 PRIAM ID: PRI001055; [L] COG0350 Methylated DNA-protein cysteine methyltransferase YP_005665800.1 [S] COG2849 Uncharacterized protein conserved in bacteria YP_005665801.1 [J] COG0072 Phenylalanyl-tRNA synthetase beta subunit YP_005665803.1 [S] COG1723 Uncharacterized conserved protein YP_005665805.1 [L] COG1381 Recombinational DNA repair protein (RecF pathway) YP_005665807.1 [J] COG1544 Ribosome-associated protein Y (PSrp-1) YP_005665808.1 [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_005665810.1 PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase YP_005665813.1 Predicted phosphatase/phosphohexomutase YP_005665814.1 [J] COG0101 Pseudouridylate synthase YP_005665815.1 [I] COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase YP_005665816.1 [R] COG1408 Predicted phosphohydrolases YP_005665817.1 [B] COG5531 SWIB-domain-containing proteins implicated in chromatin remodeling YP_005665818.1 [J] COG1186 Protein chain release factor B YP_005665819.1 PRIAM ID: PRI000851; [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005665821.1 [S] COG0217 Uncharacterized conserved protein YP_005665823.1 [M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_005665824.1 [J] COG0018 Arginyl-tRNA synthetase YP_005665825.1 PRIAM ID: PRI000175; [I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005665826.1 [F] COG0283 Cytidylate kinase YP_005665827.1 PRIAM ID: PRI001480; [I] COG0575 CDP-diglyceride synthetase YP_005665828.1 [I] COG0020 Undecaprenyl pyrophosphate synthase YP_005665831.1 [U] COG0342 Preprotein translocase subunit SecD YP_005665832.1 [L] COG0608 Single-stranded DNA-specific exonuclease YP_005665835.1 [J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005665839.1 PRIAM ID: PRI000477; [M] COG0793 Periplasmic protease YP_005665842.1 [J] COG0048 Ribosomal protein S12 YP_005665843.1 [J] COG0049 Ribosomal protein S7 YP_005665844.1 [J] COG0480 Translation elongation factors (GTPases) YP_005665845.1 [J] COG0051 Ribosomal protein S10 YP_005665846.1 PRIAM ID: PRI003776; [P] COG0369 Sulfite reductase, alpha subunit (flavoprotein) YP_005665847.1 [I] COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_005665849.1 [J] COG0261 Ribosomal protein L21 YP_005665850.1 [J] COG0211 Ribosomal protein L27 YP_005665851.1 [R] COG0536 Predicted GTPase YP_005665853.1 PRIAM ID: PRI001821; [P] COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_005665854.1 [P] COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_005665855.1 [H] COG0352 Thiamine monophosphate synthase YP_005665856.1 PRIAM ID: PRI001582; [H] COG2145 Hydroxyethylthiazole kinase, sugar kinase family YP_005665861.1 [E] COG1115 Na+/alanine symporter YP_005665862.1 [MU] COG0597 Lipoprotein signal peptidase YP_005665863.1 [T] COG1734 DnaK suppressor protein YP_005665864.1 [K] COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains YP_005665865.1 [H] COG0307 Riboflavin synthase alpha chain YP_005665866.1 PRIAM ID: PRI001540; [R] COG1092 Predicted SAM-dependent methyltransferases YP_005665867.1 [J] COG0566 rRNA methylases YP_005665868.1 [M] COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_005665869.1 [C] COG1301 Na+/H+-dicarboxylate symporters YP_005665870.1 PRIAM ID: PRI000828; [C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005665871.1 [M] COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_005665872.1 [R] COG1579 Zn-ribbon protein, possibly nucleic acid-binding YP_005665874.1 [H] COG1587 Uroporphyrinogen-III synthase YP_005665875.1 [E] COG0112 Glycine/serine hydroxymethyltransferase YP_005665876.1 PRIAM ID: PRI000206; [OU] COG0740 Protease subunit of ATP-dependent Clp proteases YP_005665877.1 [E] COG0253 Diaminopimelate epimerase YP_005665879.1 [H] COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_005665880.1 [R] COG1427 Predicted periplasmic solute-binding protein YP_005665881.1 [HR] COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_005665884.1 [T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_005665885.1 [R] COG1253 Hemolysins and related proteins containing CBS domains YP_005665886.1 [R] COG0319 Predicted metal-dependent hydrolase YP_005665889.1 [S] COG2928 Uncharacterized conserved protein YP_005665890.1 PRIAM ID: PRI000774; [L] COG2094 3-methyladenine DNA glycosylase YP_005665891.1 [K] COG0557 Exoribonuclease R YP_005665892.1 PRIAM ID: PRI001331; [O] COG0443 Molecular chaperone YP_005665893.1 [O] COG0576 Molecular chaperone GrpE (heat shock protein) YP_005665894.1 [K] COG1420 Transcriptional regulator of heat shock gene YP_005665895.1 [J] COG0442 Prolyl-tRNA synthetase YP_005665898.1 [S] COG1872 Uncharacterized conserved protein YP_005665899.1 [R] COG2984 ABC-type uncharacterized transport system, periplasmic component YP_005665900.1 [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005665904.1 [S] COG4286 Uncharacterized conserved protein related to MYG1 family YP_005665905.1 [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005665906.1 [C] COG1413 FOG: HEAT repeat YP_005665908.1 [ER] COG0591 Na+/proline symporter YP_005665910.1 [E] COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_005665912.1 PRIAM ID: PRI003114; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005665914.1 PRIAM ID: PRI002023; [R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_005665915.1 [R] COG2262 GTPases YP_005665916.1 [J] COG0621 2-methylthioadenine synthetase YP_005665918.1 [G] COG0296 1,4-alpha-glucan branching enzyme YP_005665927.1 frameshift after codon 206; possible phase variation (or sequencing error) at a poly-C stretch YP_005665930.1 frameshift after codon 416; possible phase variation (or sequencing error) at a poly-C stretch YP_005665932.1 frameshift after codon 417; possible phase variation (or sequencing error) at a poly-C stretch YP_005665936.1 [S] COG2155 Uncharacterized conserved protein YP_005665937.1 [J] COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit YP_005665938.1 PRIAM ID: PRI000288; [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_005665939.1 [J] COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_005665943.1 [L] COG1039 Ribonuclease HIII YP_005665944.1 [S] COG1426 Uncharacterized protein conserved in bacteria YP_005665950.1 [O] COG1331 Highly conserved protein containing a thioredoxin domain YP_005665952.1 [J] COG0030 Dimethyladenosine transferase (rRNA methylation) YP_005665953.1 [HI] COG1154 Deoxyxylulose-5-phosphate synthase YP_005665955.1 PRIAM ID: PRI002290 YP_005665956.1 [L] COG1570 Exonuclease VII, large subunit YP_005665957.1 [G] COG0149 Triosephosphate isomerase YP_005665958.1 [U] COG1314 Preprotein translocase subunit SecG YP_005665959.1 [J] COG0242 N-formylmethionyl-tRNA deformylase YP_005665961.1 [C] COG1413 FOG: HEAT repeat YP_005665962.1 [D] COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_005665963.1 PRIAM ID: PRI001817; [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005665964.1 [L] COG0582 Integrase YP_005665965.1 [R] COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III YP_005665967.1 [O] COG0466 ATP-dependent Lon protease, bacterial type YP_005665969.1 PRIAM ID: PRI001024; [O] COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_005665970.1 [J] COG0828 Ribosomal protein S21 YP_005665971.1 [O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_005665972.1 PRIAM ID: PRI001217; [C] COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_005665974.1 [R] COG0658 Predicted membrane metal-binding protein YP_005665976.1 [G] COG1925 Phosphotransferase system, HPr-related proteins YP_005665977.1 [G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) YP_005665978.1 [S] COG0718 Uncharacterized protein conserved in bacteria YP_005665979.1 [L] COG2812 DNA polymerase III, gamma/tau subunits YP_005665980.1 [R] COG1480 Predicted membrane-associated HD superfamily hydrolase YP_005665984.1 PRIAM ID: PRI000889; [H] COG0181 Porphobilinogen deaminase YP_005665985.1 [O] COG1066 Predicted ATP-dependent serine protease YP_005665986.1 [K] COG0571 dsRNA-specific ribonuclease YP_005665988.1 PRIAM ID: PRI001632; [G] COG1109 Phosphomannomutase YP_005665989.1 PRIAM ID: PRI001879; [P] COG0605 Superoxide dismutase YP_005665990.1 [I] COG0777 Acetyl-CoA carboxylase beta subunit YP_005665991.1 PRIAM ID: PRI000758; [F] COG0756 dUTPase YP_005665992.1 [GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) YP_005665993.1 [GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) YP_005665997.1 [S] COG3027 Uncharacterized protein conserved in bacteria YP_005665998.1 [J] COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005665999.1 [O] COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005666000.1 [H] COG0095 Lipoate-protein ligase A YP_005666001.1 [I] COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005666003.1 [E] COG0509 Glycine cleavage system H protein (lipoate-binding) YP_005666006.1 [C] COG2209 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE YP_005666007.1 [C] COG1347 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD YP_005666008.1 [C] COG2869 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC YP_005666009.1 [C] COG1805 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB YP_005666011.1 [M] COG1664 Integral membrane protein CcmA involved in cell shape determination YP_005666012.1 [L] COG0593 ATPase involved in DNA replication initiation YP_005666013.1 [R] COG0457 FOG: TPR repeat YP_005666015.1 [M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_005666017.1 PRIAM ID: PRI001033; [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005666019.1 [M] COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_005666020.1 PRIAM ID: PRI001032; [M] COG0860 N-acetylmuramoyl-L-alanine amidase YP_005666021.1 [L] COG0776 Bacterial nucleoid DNA-binding protein YP_005666023.1 [I] COG0825 Acetyl-CoA carboxylase alpha subunit YP_005666024.1 [V] COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005666026.1 [R] COG2107 Predicted periplasmic solute-binding protein YP_005666027.1 PRIAM ID: PRI000724; [L] COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_005666028.1 [S] COG5465 Uncharacterized conserved protein YP_005666029.1 [N] COG3190 Flagellar biogenesis protein YP_005666030.1 [R] COG0561 Predicted hydrolases of the HAD superfamily YP_005666031.1 PRIAM ID: PRI000095; [I] COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) YP_005666034.1 [J] COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005666035.1 [L] COG1194 A/G-specific DNA glycosylase YP_005666036.1 [R] COG1694 Predicted pyrophosphatase YP_005666037.1 [R] COG1266 Predicted metal-dependent membrane protease YP_005666043.1 [T] COG0631 Serine/threonine protein phosphatase YP_005666044.1 PRIAM ID: PRI001260; [E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005666045.1 [R] COG1253 Hemolysins and related proteins containing CBS domains YP_005666046.1 [R] COG1253 Hemolysins and related proteins containing CBS domains YP_005666048.1 [F] COG0717 Deoxycytidine deaminase YP_005666049.1 [L] COG2255 Holliday junction resolvasome, helicase subunit YP_005666051.1 PRIAM ID: PRI003748; [G] COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases YP_005666053.1 [L] COG0629 Single-stranded DNA-binding protein YP_005666054.1 PRIAM ID: PRI001506; [E] COG0260 Leucyl aminopeptidase YP_005666056.1 [L] COG1466 DNA polymerase III, delta subunit YP_005666057.1 [R] COG0313 Predicted methyltransferases YP_005666061.1 PRIAM ID: PRI000715; [H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005666063.1 [C] COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes YP_005666064.1 [C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005666065.1 [S] COG1496 Uncharacterized conserved protein YP_005666066.1 [I] COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis YP_005666070.1 PRIAM ID: PRI002042; [C] COG0633 Ferredoxin YP_005666071.1 [NU] COG1298 Flagellar biosynthesis pathway, component FlhA YP_005666072.1 [K] COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005666074.1 [J] COG0162 Tyrosyl-tRNA synthetase YP_005666075.1 [G] COG0362 6-phosphogluconate dehydrogenase YP_005666076.1 PRIAM ID: PRI000879; [M] COG0481 Membrane GTPase LepA YP_005666078.1 [C] COG3202 ATP/ADP translocase YP_005666080.1 [P] COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_005666081.1 PRIAM ID: PRI001821; [P] COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_005666082.1 [P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_005666083.1 [P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_005666084.1 [I] COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_005666085.1 [M] COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_005666087.1 [L] COG1195 Recombinational DNA repair ATPase (RecF pathway) YP_005666088.1 [L] COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_005666089.1 [O] COG0691 tmRNA-binding protein YP_005666090.1 [H] COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis YP_005666091.1 [H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_005666096.1 PRIAM ID: PRI004694; [I] COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005666097.1 [H] COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_005666098.1 [J] COG0227 Ribosomal protein L28 YP_005666099.1 [G] COG1640 4-alpha-glucanotransferase YP_005666102.1 [U] COG4789 Type III secretory pathway, component EscV YP_005666103.1 [NU] COG1377 Flagellar biosynthesis pathway, component FlhB YP_005666104.1 [J] COG0012 Predicted GTPase, probable translation factor YP_005666105.1 [H] COG0196 FAD synthase YP_005666106.1 [J] COG0130 Pseudouridine synthase YP_005666107.1 [J] COG0858 Ribosome-binding factor A YP_005666108.1 [J] COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_005666109.1 [K] COG0195 Transcription elongation factor YP_005666110.1 [J] COG0539 Ribosomal protein S1 YP_005666111.1 [O] COG0492 Thioredoxin reductase YP_005666112.1 [I] COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_005666114.1 [M] COG0682 Prolipoprotein diacylglyceryltransferase YP_005666115.1 [U] COG0706 Preprotein translocase subunit YidC YP_005666116.1 [L] COG0593 ATPase involved in DNA replication initiation YP_005666118.1 PRIAM ID: PRI001558; [G] COG0058 Glucan phosphorylase YP_005666119.1 [C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005666120.1 [C] COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_005666121.1 [C] COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_005666123.1 [M] COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_005666124.1 [M] COG2825 Outer membrane protein YP_005666125.1 [M] COG4775 Outer membrane protein/protective antigen OMA87 YP_005666126.1 [L] COG0353 Recombinational DNA repair protein (RecF pathway) YP_005666127.1 PRIAM ID: PRI001373; [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_005666128.1 [I] COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005666129.1 [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005666130.1 [IQ] COG0236 Acyl carrier protein YP_005666131.1 [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_005666135.1 [R] COG0733 Na+-dependent transporters of the SNF family YP_005666136.1 [C] COG1301 Na+/H+-dicarboxylate symporters YP_005666138.1 [R] COG0457 FOG: TPR repeat YP_005666139.1 PRIAM ID: PRI002147; [P] COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_005666141.1 [E] COG0531 Amino acid transporters YP_005666142.1 PRIAM ID: PRI004191; [G] COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes YP_005666144.1 PRIAM ID: PRI001823; [P] COG1135 ABC-type metal ion transport system, ATPase component YP_005666145.1 [P] COG2011 ABC-type metal ion transport system, permease component YP_005666146.1 [P] COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_005666149.1 [L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005666150.1 [L] COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005666151.1 [F] COG0125 Thymidylate kinase YP_005666152.1 PRIAM ID: PRI001554; [L] COG0470 ATPase involved in DNA replication YP_005666153.1 [R] COG0400 Predicted esterase YP_005666154.1 [J] COG0009 Putative translation factor (SUA5) YP_005666155.1 PRIAM ID: PRI000862; [E] COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog YP_005666158.1 [R] COG1611 Predicted Rossmann fold nucleotide-binding protein YP_005666159.1 [H] COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_005666160.1 [H] COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_005666161.1 [S] COG1284 Uncharacterized conserved protein YP_005666162.1 [R] COG0496 Predicted acid phosphatase YP_005666163.1 [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005666164.1 [R] COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA YP_005666168.1 [J] COG0621 2-methylthioadenine synthetase YP_005666169.1 [J] COG0267 Ribosomal protein L33 YP_005666170.1 [V] COG0577 ABC-type antimicrobial peptide transport system, permease component YP_005666171.1 PRIAM ID: PRI001821; [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005666173.1 [J] COG0102 Ribosomal protein L13 YP_005666174.1 [J] COG0103 Ribosomal protein S9 YP_005666175.1 [M] COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_005666176.1 PRIAM ID: PRI000273; [F] COG0563 Adenylate kinase and related kinases YP_005666180.1 [G] COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_005666181.1 [G] COG0364 Glucose-6-phosphate 1-dehydrogenase YP_005666182.1 [E] COG4166 ABC-type oligopeptide transport system, periplasmic component YP_005666183.1 PRIAM ID: PRI001024; [O] COG0533 Metal-dependent proteases with possible chaperone activity YP_005666184.1 [K] COG1438 Arginine repressor YP_005666185.1 [E] COG0765 ABC-type amino acid transport system, permease component YP_005666186.1 PRIAM ID: PRI001823; [E] COG1126 ABC-type polar amino acid transport system, ATPase component YP_005666189.1 [S] COG1295 Predicted membrane protein YP_005666190.1 [QR] COG0500 SAM-dependent methyltransferases YP_005666192.1 [G] COG0036 Pentose-5-phosphate-3-epimerase YP_005666193.1 [J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_005666194.1 PRIAM ID: PRI003581; [I] COG0511 Biotin carboxyl carrier protein YP_005666195.1 [I] COG0439 Biotin carboxylase YP_005666208.1 PRIAM ID: PRI000245; [F] COG1816 Adenosine deaminase YP_005666209.1 [F] COG0519 GMP synthase, PP-ATPase domain/subunit YP_005666210.1 PRIAM ID: PRI002146; [F] COG0516 IMP dehydrogenase/GMP reductase YP_005666216.1 [S] COG1738 Uncharacterized conserved protein YP_005666217.1 [J] COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_005666221.1 [O] COG1495 Disulfide bond formation protein DsbB YP_005666222.1 [O] COG1651 Protein-disulfide isomerase YP_005666225.1 PRIAM ID: PRI003356; [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_005666226.1 PRIAM ID: PRI002015; [F] COG0775 Nucleoside phosphorylase YP_005666228.1 [M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_005666229.1 [F] COG0504 CTP synthase (UTP-ammonia lyase) YP_005666230.1 [L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_005666231.1 [E] COG0747 ABC-type dipeptide transport system, periplasmic component YP_005666232.1 [E] COG4166 ABC-type oligopeptide transport system, periplasmic component YP_005666233.1 [E] COG4166 ABC-type oligopeptide transport system, periplasmic component YP_005666234.1 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005666235.1 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005666236.1 PRIAM ID: PRI001824; [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005666237.1 PRIAM ID: PRI001824; [EP] COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005666239.1 [P] COG0471 Di- and tricarboxylate transporters YP_005666240.1 [G] COG0205 6-phosphofructokinase YP_005666241.1 [R] COG1073 Hydrolases of the alpha/beta superfamily YP_005666242.1 [G] COG0205 6-phosphofructokinase YP_005666243.1 [M] COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_005666244.1 [J] COG0495 Leucyl-tRNA synthetase YP_005666245.1 [R] COG1073 Hydrolases of the alpha/beta superfamily YP_005666246.1 PRIAM ID: PRI002705 YP_005666248.1 [L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_005666249.1 [S] COG1262 Uncharacterized conserved protein YP_005666254.1 [S] COG2912 Uncharacterized conserved protein YP_005666255.1 frameshift after codon 385; possible phase variation (or sequencing error) at a homopolymeric stretch. YP_005666258.1 [O] COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005666260.1 PRIAM ID: PRI003356; [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_005666261.1 [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_005666262.1 PRIAM ID: PRI003665; [H] COG0001 Glutamate-1-semialdehyde aminotransferase YP_005666263.1 [K] COG1678 Putative transcriptional regulator YP_005666264.1 [S] COG1259 Uncharacterized conserved protein YP_005666265.1 [G] COG0120 Ribose 5-phosphate isomerase YP_005666270.1 [S] COG0327 Uncharacterized conserved protein YP_005666271.1 [E] COG1164 Oligoendopeptidase F YP_005666272.1 [O] COG0234 Co-chaperonin GroES (HSP10) YP_005666273.1 [O] COG0459 Chaperonin GroEL (HSP60 family) YP_005666276.1 PRIAM ID: PRI001178; [S] COG4285 Uncharacterized conserved protein YP_005666277.1 [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005666278.1 PRIAM ID: PRI001958; [L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member YP_005666279.1 [J] COG0143 Methionyl-tRNA synthetase YP_005666281.1 [F] COG0194 Guanylate kinase YP_005666282.1 [L] COG0164 Ribonuclease HII YP_005666283.1 [J] COG0335 Ribosomal protein L19 YP_005666284.1 [J] COG0336 tRNA-(guanine-N1)-methyltransferase YP_005666285.1 [J] COG0228 Ribosomal protein S16 YP_005666286.1 [U] COG0541 Signal recognition particle GTPase YP_005666287.1 [J] COG2890 Methylase of polypeptide chain release factors YP_005666288.1 [J] COG0216 Protein chain release factor A YP_005666289.1 [J] COG0254 Ribosomal protein L31 YP_005666291.1 [U] COG0681 Signal peptidase I YP_005666292.1 [J] COG0060 Isoleucyl-tRNA synthetase YP_005666294.1 [T] COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH YP_005666298.1 [C] COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_005666299.1 [C] COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_005666300.1 [S] COG1624 Uncharacterized conserved protein YP_005666302.1 [M] COG1560 Lauroyl/myristoyl acyltransferase YP_005666304.1 [G] COG0469 Pyruvate kinase YP_005666305.1 PRIAM ID: PRI001817; [L] COG0178 Excinuclease ATPase subunit YP_005666306.1 [RTKL] COG0515 Serine/threonine protein kinase YP_005666307.1 [J] COG0525 Valyl-tRNA synthetase YP_005666309.1 [C] COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_005666310.1 [C] COG1269 Archaeal/vacuolar-type H+-ATPase subunit I YP_005666311.1 [C] COG1394 Archaeal/vacuolar-type H+-ATPase subunit D YP_005666312.1 PRIAM ID: PRI000139; [C] COG1156 Archaeal/vacuolar-type H+-ATPase subunit B YP_005666313.1 PRIAM ID: PRI004206; [C] COG1155 Archaeal/vacuolar-type H+-ATPase subunit A YP_005666315.1 [C] COG1390 Archaeal/vacuolar-type H+-ATPase subunit E YP_005666318.1 [G] COG0176 Transaldolase YP_005666319.1 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_005666320.1 [K] COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005666321.1 [J] COG0222 Ribosomal protein L7/L12 YP_005666322.1 [J] COG0244 Ribosomal protein L10 YP_005666323.1 [J] COG0081 Ribosomal protein L1 YP_005666324.1 [J] COG0080 Ribosomal protein L11 YP_005666325.1 [K] COG0250 Transcription antiterminator YP_005666326.1 [U] COG0690 Preprotein translocase subunit SecE YP_005666327.1 [J] COG0050 GTPases - translation elongation factors YP_005666328.1 [J] COG0361 Translation initiation factor 1 (IF-1) YP_005666330.1 [R] COG2166 SufE protein probably involved in Fe-S center assembly YP_005666331.1 [R] COG1268 Uncharacterized conserved protein YP_005666336.1 [EM] COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005666337.1 PRIAM ID: PRI003950; [E] COG0527 Aspartokinases YP_005666338.1 [E] COG0136 Aspartate-semialdehyde dehydrogenase YP_005666339.1 PRIAM ID: PRI001090; [E] COG0289 Dihydrodipicolinate reductase YP_005666340.1 PRIAM ID: PRI000460; [E] COG3186 Phenylalanine-4-hydroxylase YP_005666341.1 [S] COG1738 Uncharacterized conserved protein YP_005666343.1 [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005666344.1 [H] COG0502 Biotin synthase and related enzymes YP_005666345.1 PRIAM ID: PRI002623; [H] COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_005666346.1 [H] COG0132 Dethiobiotin synthetase YP_005666347.1 [H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_005666349.1 [E] COG0128 5-enolpyruvylshikimate-3-phosphate synthase YP_005666350.1 [E] COG0703 Shikimate kinase YP_005666351.1 [E] COG0082 Chorismate synthase YP_005666352.1 [E] COG0337 3-dehydroquinate synthetase YP_005666353.1 [E] COG0169 Shikimate 5-dehydrogenase YP_005666356.1 [S] COG1945 Uncharacterized conserved protein YP_005666357.1 [E] COG0531 Amino acid transporters YP_005666358.1 PRIAM ID: PRI001754; [E] COG0665 Glycine/D-amino acid oxidases (deaminating) YP_005666360.1 PRIAM ID: PRI004501; [C] COG0039 Malate/lactate dehydrogenases YP_005666362.1 PRIAM ID: PRI000487; [G] COG0166 Glucose-6-phosphate isomerase YP_005666363.1 [L] COG0582 Integrase YP_005666366.1 [R] COG0457 FOG: TPR repeat YP_005666369.1 [QR] COG0500 SAM-dependent methyltransferases YP_005666370.1 [IM] COG0761 Penicillin tolerance protein YP_005666372.1 [P] COG1055 Na+/H+ antiporter NhaD and related arsenite permeases YP_005666373.1 [P] COG0659 Sulfate permease and related transporters (MFS superfamily) YP_005666374.1 [C] COG0114 Fumarase YP_005666375.1 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_005666377.1 [U] COG2095 Multiple antibiotic transporter YP_005666378.1 [U] COG2095 Multiple antibiotic transporter YP_005666379.1 [J] COG0024 Methionine aminopeptidase YP_005666387.1 PRIAM ID: PRI001166; [FJ] COG0590 Cytosine/adenosine deaminases YP_005666388.1 [J] COG0184 Ribosomal protein S15P/S13E YP_005666389.1 [J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_005666390.1 PRIAM ID: PRI001472; [O] COG0465 ATP-dependent Zn proteases YP_005666391.1 [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005666392.1 [R] COG0795 Predicted permeases YP_005666393.1 [R] COG0795 Predicted permeases YP_005666395.1 [J] COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_005666396.1 [J] COG0292 Ribosomal protein L20 YP_005666397.1 [J] COG0291 Ribosomal protein L35 YP_005666398.1 [J] COG0290 Translation initiation factor 3 (IF-3) YP_005666399.1 [K] COG0781 Transcription termination factor YP_005666400.1 [M] COG0812 UDP-N-acetylmuramate dehydrogenase YP_005666401.1 [QR] COG0500 SAM-dependent methyltransferases YP_005666402.1 [R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase YP_005666403.1 [F] COG0208 Ribonucleotide reductase, beta subunit YP_005666404.1 [F] COG0209 Ribonucleotide reductase, alpha subunit YP_005666405.1 PRIAM ID: PRI001347; [I] COG1183 Phosphatidylserine synthase YP_005666406.1 [S] COG1322 Uncharacterized protein conserved in bacteria YP_005666407.1 [R] COG1026 Predicted Zn-dependent peptidases, insulinase-like YP_005666408.1 PRIAM ID: PRI000640; [E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005666409.1 [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005666410.1 [C] COG0074 Succinyl-CoA synthetase, alpha subunit YP_005666411.1 [C] COG0045 Succinyl-CoA synthetase, beta subunit YP_005666412.1 [U] COG0552 Signal recognition particle GTPase YP_005666413.1 [R] COG0670 Integral membrane protein, interacts with FtsH YP_005666414.1 [E] COG0814 Amino acid permeases YP_005666415.1 [M] COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains YP_005666416.1 [G] COG1109 Phosphomannomutase YP_005666417.1 PRIAM ID: PRI000787; [J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_005666418.1 [M] COG0763 Lipid A disaccharide synthetase YP_005666431.1 [I] COG0416 Fatty acid/phospholipid biosynthesis enzyme YP_005666432.1 [J] COG0333 Ribosomal protein L32 YP_005666434.1 [J] COG1530 Ribonucleases G and E YP_005666435.1 PRIAM ID: PRI001022 YP_005666436.1 PRIAM ID: PRI000705; [O] COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like YP_005666439.1 [I] COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase YP_005666440.1 [J] COG0359 Ribosomal protein L9 YP_005666441.1 [J] COG0238 Ribosomal protein S18 YP_005666442.1 [J] COG0360 Ribosomal protein S6 YP_005666443.1 PRIAM ID: PRI001009; [J] COG0193 Peptidyl-tRNA hydrolase YP_005666444.1 [J] COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_005666445.1 PRIAM ID: PRI001170; [G] COG0297 Glycogen synthase YP_005666446.1 [I] COG0558 Phosphatidylglycerophosphate synthase YP_005666447.1 [J] COG0751 Glycyl-tRNA synthetase, beta subunit YP_005666452.1 [L] COG0358 DNA primase (bacterial type) YP_005666453.1 [L] COG0249 Mismatch repair ATPase (MutS family) YP_005666454.1 [L] COG0322 Nuclease subunit of the excinuclease complex YP_005666456.1 [J] COG0199 Ribosomal protein S14 YP_005666457.1 [J] COG0257 Ribosomal protein L36 YP_005666459.1 [OC] COG0526 Thiol-disulfide isomerase and thioredoxins YP_005666460.1 [J] COG0215 Cysteinyl-tRNA synthetase YP_005666461.1 [J] COG1190 Lysyl-tRNA synthetase (class II) YP_005666462.1 PRIAM ID: PRI001830; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins YP_005666464.1 [L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_005666466.1 PRIAM ID: PRI000173; [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_005666467.1 [I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005666468.1 PRIAM ID: PRI001455; [P] COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase YP_005666469.1 PRIAM ID: PRI001778; [E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_005666470.1 PRIAM ID: PRI001150; [C] COG0221 Inorganic pyrophosphatase YP_005666471.1 PRIAM ID: PRI001957; [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005666472.1 [IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005666473.1 [S] COG0799 Uncharacterized homolog of plant Iojap protein YP_005666474.1 [E] COG0560 Phosphoserine phosphatase YP_005666476.1 [HR] COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_005666477.1 [J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_005666478.1 [T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_005666480.1 [P] COG1324 Uncharacterized protein involved in tolerance to divalent cations YP_005666481.1 [R] COG1837 Predicted RNA-binding protein (contains KH domain) YP_005666482.1 [M] COG0773 UDP-N-acetylmuramate-alanine ligase YP_005666483.1 PRIAM ID: PRI000420; [M] COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_005666484.1 [D] COG0772 Bacterial cell division membrane protein YP_005666485.1 PRIAM ID: PRI002193; [M] COG1388 FOG: LysM repeat YP_005666486.1 [M] COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_005666487.1 [M] COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005666488.1 [M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_005666489.1 [O] COG0459 Chaperonin GroEL (HSP60 family) YP_005666490.1 [R] COG1409 Predicted phosphohydrolases YP_005666492.1 [J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_005666493.1 PRIAM ID: PRI001703; [F] COG0775 Nucleoside phosphorylase YP_005666494.1 [G] COG0021 Transketolase YP_005666495.1 [J] COG0013 Alanyl-tRNA synthetase YP_005666496.1 [LK] COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_005666497.1 [H] COG0407 Uroporphyrinogen-III decarboxylase YP_005666498.1 [H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005666499.1 [H] COG1232 Protoporphyrinogen oxidase YP_005666502.1 [J] COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_005666503.1 [U] COG1862 Preprotein translocase subunit YajC YP_005666504.1 [C] COG2871 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF YP_005666506.1 [D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005666507.1 PRIAM ID: PRI002023; [R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_005666508.1 [R] COG2940 Proteins containing SET domain YP_005666509.1 [R] COG1881 Phospholipid-binding protein YP_005666510.1 [E] COG1115 Na+/alanine symporter YP_005666513.1 [H] COG0054 Riboflavin synthase beta-chain YP_005666514.1 PRIAM ID: PRI002117; [H] COG0807 GTP cyclohydrolase II YP_005666515.1 [H] COG1985 Pyrimidine reductase, riboflavin biosynthesis YP_005666516.1 [J] COG0172 Seryl-tRNA synthetase YP_005666517.1 [S] COG1814 Uncharacterized membrane protein YP_005666518.1 [P] COG2217 Cation transport ATPase YP_005666519.1 [D] COG0772 Bacterial cell division membrane protein YP_005666520.1 PRIAM ID: PRI001182; [H] COG0340 Biotin-(acetyl-CoA carboxylase) ligase YP_005666522.1 [J] COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_005666523.1 PRIAM ID: PRI000555; [G] COG0588 Phosphoglycerate mutase 1 YP_005666524.1 PRIAM ID: PRI001260; [E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005666525.1 [C] COG0822 NifU homolog involved in Fe-S cluster formation YP_005666526.1 [N] COG1536 Flagellar motor switch protein YP_005666528.1 [NU] COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_005666530.1 [G] COG4284 UDP-glucose pyrophosphorylase YP_005666531.1 PRIAM ID: PRI002311; [C] COG0240 Glycerol-3-phosphate dehydrogenase YP_005666535.1 PRIAM ID: PRI000714; [C] COG1274 Phosphoenolpyruvate carboxykinase (GTP) YP_005666536.1 [D] COG1077 Actin-like ATPase involved in cell morphogenesis YP_005666537.1 [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_005666538.1 [O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_005666539.1 PRIAM ID: PRI000206; [OU] COG0740 Protease subunit of ATP-dependent Clp proteases YP_005666540.1 PRIAM ID: PRI001061; [O] COG1219 ATP-dependent protease Clp, ATPase subunit YP_005666541.1 PRIAM ID: PRI000606; [J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_005666542.1 [R] COG1160 Predicted GTPases YP_005666544.1 [U] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_005666545.1 [R] COG0457 FOG: TPR repeat YP_005666546.1 [I] COG0688 Phosphatidylserine decarboxylase YP_005666547.1 [R] COG0486 Predicted GTPase YP_005666548.1 PRIAM ID: PRI001213; [L] COG0177 Predicted EndoIII-related endonuclease YP_005666549.1 [E] COG1114 Branched-chain amino acid permeases YP_005666550.1 [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_005666552.1 [C] COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_005666553.1 [H] COG0320 Lipoate synthase YP_005666554.1 [U] COG4669 Type III secretory pathway, lipoprotein EscJ YP_005666556.1 [NU] COG1317 Flagellar biosynthesis/type III secretory pathway protein YP_005666557.1 [NU] COG1338 Flagellar biosynthesis pathway, component FliP YP_005666558.1 [U] COG4794 Type III secretory pathway, component EscS YP_005666559.1 [U] COG4791 Type III secretory pathway, component EscT YP_005666564.1 [NU] COG2165 Type II secretory pathway, pseudopilin PulG YP_005666565.1 [NU] COG1459 Type II secretory pathway, component PulF YP_005666566.1 [NU] COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_005666567.1 [NU] COG1450 Type II secretory pathway, component PulD YP_005666569.1 PRIAM ID: PRI004710; [E] COG0006 Xaa-Pro aminopeptidase YP_005666570.1 [L] COG0323 DNA mismatch repair enzyme (predicted ATPase) YP_005666571.1 [R] COG0457 FOG: TPR repeat YP_005666575.1 [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005666576.1 [J] COG0441 Threonyl-tRNA synthetase YP_005666577.1 PRIAM ID: PRI001996; [D] COG1192 ATPases involved in chromosome partitioning YP_005666580.1 [J] COG0180 Tryptophanyl-tRNA synthetase YP_005666581.1 [L] COG0556 Helicase subunit of the DNA excision repair complex YP_005666582.1 [G] COG0148 Enolase YP_005666583.1 PRIAM ID: PRI000365; [TK] COG2208 Serine phosphatase RsbU, regulator of sigma subunit YP_005666584.1 [TK] COG2208 Serine phosphatase RsbU, regulator of sigma subunit YP_005666587.1 [C] COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_005666588.1 [C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_005666589.1 [C] COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_005666590.1 [L] COG0084 Mg-dependent DNase YP_005666591.1 PRIAM ID: PRI001830; [OC] COG4232 Thiol:disulfide interchange protein YP_005666592.1 [U] COG0811 Biopolymer transport proteins YP_005666593.1 [U] COG0848 Biopolymer transport protein YP_005666595.1 [U] COG0823 Periplasmic component of the Tol biopolymer transport system YP_005666596.1 [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_005666597.1 PRIAM ID: PRI003497; [M] COG1388 FOG: LysM repeat YP_005666599.1 [O] COG0450 Peroxiredoxin YP_005666600.1 [O] COG0459 Chaperonin GroEL (HSP60 family) YP_005666601.1 [S] COG3876 Uncharacterized protein conserved in bacteria YP_005666602.1 PRIAM ID: PRI001592; [F] COG0127 Xanthosine triphosphate pyrophosphatase YP_005666604.1 [L] COG0692 Uracil DNA glycosylase YP_005666605.1 [L] COG0210 Superfamily I DNA and RNA helicases YP_005666606.1 [K] COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog YP_005666608.1 [L] COG0550 Topoisomerase IA YP_005666609.1 [J] COG0042 tRNA-dihydrouridine synthase YP_005666612.1 [S] COG2849 Uncharacterized protein conserved in bacteria YP_005666613.1 [H] COG0212 5-formyltetrahydrofolate cyclo-ligase YP_005666614.1 [L] COG0468 RecA/RadA recombinase YP_005666615.1 [H] COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C YP_005666616.1 [S] COG1478 Uncharacterized conserved protein YP_005666617.1 PRIAM ID: PRI000610; [H] COG0262 Dihydrofolate reductase YP_005666618.1 [H] COG0294 Dihydropteroate synthase and related enzymes YP_005666619.1 [H] COG1539 Dihydroneopterin aldolase YP_005666620.1 [K] COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005666622.1 [J] COG0268 Ribosomal protein S20 YP_005666624.1 [L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member YP_005666626.1 [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005666627.1 [R] COG0110 Acetyltransferase (isoleucine patch superfamily) YP_005666628.1 PRIAM ID: PRI001340; [H] COG0142 Geranylgeranyl pyrophosphate synthase YP_005666630.1 [F] COG1351 Predicted alternative thymidylate synthase