-- dump date 20140619_041042 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_001942088.1 189345559 6355107 162..1637 1 NC_010803.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1637 dnaA 6355107 dnaA Chlorobium limicola DSM 245 chromosomal replication initiation protein YP_001942088.1 162 D 290315 CDS YP_001942089.1 189345560 6354916 1930..3054 1 NC_010803.1 KEGG: plt:Plut_0001 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; DNA polymerase III subunit beta 3054 6354916 Clim_0002 Chlorobium limicola DSM 245 DNA polymerase III subunit beta YP_001942089.1 1930 D 290315 CDS YP_001942090.1 189345561 6354917 3071..4162 1 NC_010803.1 TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: plt:Plut_0002 RecF protein; DNA replication and repair protein RecF 4162 6354917 Clim_0003 Chlorobium limicola DSM 245 DNA replication and repair protein RecF YP_001942090.1 3071 D 290315 CDS YP_001942091.1 189345562 6354918 4159..4467 1 NC_010803.1 KEGG: cch:Cag_2009 hypothetical protein; hypothetical protein 4467 6354918 Clim_0004 Chlorobium limicola DSM 245 hypothetical protein YP_001942091.1 4159 D 290315 CDS YP_001942092.1 189345563 6354919 complement(4546..5769) 1 NC_010803.1 PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: cph:Cpha266_0026 beta-lactamase domain protein; beta-lactamase domain-containing protein 5769 6354919 Clim_0005 Chlorobium limicola DSM 245 beta-lactamase domain-containing protein YP_001942092.1 4546 R 290315 CDS YP_001942093.1 189345564 6354920 complement(6005..8386) 1 NC_010803.1 PFAM: DNA polymerase B exonuclease; DNA polymerase B region; SMART: DNA-directed DNA polymerase B; KEGG: cph:Cpha266_0027 DNA polymerase B region; cyclic nucleotide-binding protein 8386 6354920 Clim_0006 Chlorobium limicola DSM 245 cyclic nucleotide-binding protein YP_001942093.1 6005 R 290315 CDS YP_001942094.1 189345565 6354921 complement(8448..10313) 1 NC_010803.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 10313 6354921 Clim_0007 Chlorobium limicola DSM 245 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_001942094.1 8448 R 290315 CDS YP_001942095.1 189345566 6354922 10832..11302 1 NC_010803.1 KEGG: cph:Cpha266_0029 thiosulfate-binding protein SoxY; thiosulfate-binding protein SoxY 11302 6354922 Clim_0008 Chlorobium limicola DSM 245 thiosulfate-binding protein SoxY YP_001942095.1 10832 D 290315 CDS YP_001942096.1 189345567 6354923 11339..11635 1 NC_010803.1 PFAM: Sulphur oxidation protein SoxZ; KEGG: cph:Cpha266_0030 sulfur oxidation protein SoxZ; sulfur oxidation protein SoxZ 11635 6354923 Clim_0009 Chlorobium limicola DSM 245 sulfur oxidation protein SoxZ YP_001942096.1 11339 D 290315 CDS YP_001942097.1 189345568 6354924 11700..12071 1 NC_010803.1 PFAM: cytochrome c class I; KEGG: pvi:Cvib_0008 sulfide dehydrogenase (flavocytochrome), cytochrome c subunit; cytochrome c class I 12071 6354924 Clim_0010 Chlorobium limicola DSM 245 cytochrome c class I YP_001942097.1 11700 D 290315 CDS YP_001942098.1 189345569 6354925 12087..13379 1 NC_010803.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase flavin-binding; KEGG: cph:Cpha266_0032 sulfide dehydrogenase (flavocytochrome), flavoprotein subunit; Flavocytochrome c sulfide dehydrogenase 13379 6354925 Clim_0011 Chlorobium limicola DSM 245 Flavocytochrome c sulfide dehydrogenase YP_001942098.1 12087 D 290315 CDS YP_001942099.1 189345570 6354926 13548..15371 1 NC_010803.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 15371 secD 6354926 secD Chlorobium limicola DSM 245 preprotein translocase subunit SecD YP_001942099.1 13548 D 290315 CDS YP_001942100.1 189345571 6354927 15393..16328 1 NC_010803.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 16328 secF 6354927 secF Chlorobium limicola DSM 245 preprotein translocase subunit SecF YP_001942100.1 15393 D 290315 CDS YP_001942101.1 189345572 6354928 16388..17701 1 NC_010803.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: cph:Cpha266_0035 PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain 17701 6354928 Clim_0014 Chlorobium limicola DSM 245 SurA domain YP_001942101.1 16388 D 290315 CDS YP_001942102.1 189345573 6354929 complement(17690..19621) 1 NC_010803.1 KEGG: cph:Cpha266_0036 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B 19621 6354929 Clim_0015 Chlorobium limicola DSM 245 DNA gyrase subunit B YP_001942102.1 17690 R 290315 CDS YP_001942103.1 189345574 6354930 complement(19711..20100) 1 NC_010803.1 PFAM: protein of unknown function UPF0102; KEGG: cph:Cpha266_0037 hypothetical protein; hypothetical protein 20100 6354930 Clim_0016 Chlorobium limicola DSM 245 hypothetical protein YP_001942103.1 19711 R 290315 CDS YP_001942104.1 189345575 6354931 complement(20113..21012) 1 NC_010803.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 21012 rnhB 6354931 rnhB Chlorobium limicola DSM 245 ribonuclease HII YP_001942104.1 20113 R 290315 CDS YP_001942105.1 189345576 6354932 21239..22939 1 NC_010803.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: cph:Cpha266_0040 ribonuclease, Rne/Rng family; ribonuclease, Rne/Rng family 22939 6354932 Clim_0018 Chlorobium limicola DSM 245 ribonuclease, Rne/Rng family YP_001942105.1 21239 D 290315 CDS YP_001942106.1 189345577 6354933 22958..23821 1 NC_010803.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 23821 dapD 6354933 dapD Chlorobium limicola DSM 245 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_001942106.1 22958 D 290315 CDS YP_001942107.1 189345578 6354934 23941..25638 1 NC_010803.1 KEGG: cph:Cpha266_0042 C-terminal processing peptidase-3. Serine peptidase. MEROPS family S41A; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 25638 6354934 Clim_0020 Chlorobium limicola DSM 245 carboxyl-terminal protease YP_001942107.1 23941 D 290315 CDS YP_001942108.1 189345579 6354935 complement(25618..26331) 1 NC_010803.1 KEGG: cph:Cpha266_0043 hypothetical protein; hypothetical protein 26331 6354935 Clim_0021 Chlorobium limicola DSM 245 hypothetical protein YP_001942108.1 25618 R 290315 CDS YP_001942109.1 189345580 6354936 complement(26395..27537) 1 NC_010803.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: cch:Cag_0035 geranylgeranyl reductase; geranylgeranyl reductase 27537 6354936 Clim_0022 Chlorobium limicola DSM 245 geranylgeranyl reductase YP_001942109.1 26395 R 290315 CDS YP_001942110.1 189345581 6354937 complement(27581..29050) 1 NC_010803.1 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase 29050 6354937 Clim_0023 Chlorobium limicola DSM 245 glycyl-tRNA synthetase YP_001942110.1 27581 R 290315 CDS YP_001942111.1 189345582 6354938 29193..29717 1 NC_010803.1 KEGG: pvi:Cvib_0150 hypothetical protein; hypothetical protein 29717 6354938 Clim_0024 Chlorobium limicola DSM 245 hypothetical protein YP_001942111.1 29193 D 290315 CDS YP_001942112.1 189345583 6354939 29775..30212 1 NC_010803.1 KEGG: pvi:Cvib_0150 hypothetical protein; hypothetical protein 30212 6354939 Clim_0025 Chlorobium limicola DSM 245 hypothetical protein YP_001942112.1 29775 D 290315 CDS YP_001942113.1 189345584 6354259 complement(30422..30730) 1 NC_010803.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: plt:Plut_0018 hypothetical protein; ATP-dependent Clp protease adaptor protein ClpS 30730 6354259 Clim_0026 Chlorobium limicola DSM 245 ATP-dependent Clp protease adaptor protein ClpS YP_001942113.1 30422 R 290315 CDS YP_001942114.1 189345585 6355549 complement(30825..31787) 1 NC_010803.1 PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: cph:Cpha266_0047 muramoyltetrapeptide carboxypeptidase; Muramoyltetrapeptide carboxypeptidase 31787 6355549 Clim_0027 Chlorobium limicola DSM 245 Muramoyltetrapeptide carboxypeptidase YP_001942114.1 30825 R 290315 CDS YP_001942115.1 189345586 6355550 complement(31832..32098) 1 NC_010803.1 PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: plt:Plut_0020 ATP synthase F1, epsilon subunit; H+transporting two-sector ATPase delta/subunit epsilon 32098 6355550 Clim_0028 Chlorobium limicola DSM 245 H+transporting two-sector ATPase delta/subunit epsilon YP_001942115.1 31832 R 290315 CDS YP_001942116.1 189345587 6355551 complement(32115..33503) 1 NC_010803.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 33503 6355551 Clim_0029 Chlorobium limicola DSM 245 F0F1 ATP synthase subunit beta YP_001942116.1 32115 R 290315 CDS YP_001942117.1 189345588 6355553 33880..34419 1 NC_010803.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cch:Cag_2013 thiol:disulfide interchange protein, thioredoxin family protein; redoxin domain-containing protein 34419 6355553 Clim_0030 Chlorobium limicola DSM 245 redoxin domain-containing protein YP_001942117.1 33880 D 290315 CDS YP_001942118.1 189345589 6355554 34568..36433 1 NC_010803.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 36433 6355554 Clim_0031 Chlorobium limicola DSM 245 phosphoenolpyruvate carboxykinase YP_001942118.1 34568 D 290315 CDS YP_001942119.1 189345590 6355555 36820..38220 1 NC_010803.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: cph:Cpha266_0843 membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein 38220 6355555 Clim_0032 Chlorobium limicola DSM 245 aromatic hydrocarbon degradation membrane protein YP_001942119.1 36820 D 290315 CDS YP_001942120.1 189345591 6355556 complement(38307..38537) 1 NC_010803.1 PFAM: protein of unknown function DUF1458; KEGG: cte:CT2229 hypothetical protein; hypothetical protein 38537 6355556 Clim_0033 Chlorobium limicola DSM 245 hypothetical protein YP_001942120.1 38307 R 290315 CDS YP_001942121.1 189345592 6355557 39191..40744 1 NC_010803.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Polysulphide reductase NrfD; KEGG: cph:Cpha266_0119 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 40744 6355557 Clim_0034 Chlorobium limicola DSM 245 4Fe-4S ferredoxin YP_001942121.1 39191 D 290315 CDS YP_001942122.1 189345593 6355558 40764..43625 1 NC_010803.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: cph:Cpha266_0120 formate dehydrogenase; molydopterin dinucleotide-binding region 43625 6355558 Clim_0035 Chlorobium limicola DSM 245 molydopterin dinucleotide-binding region YP_001942122.1 40764 D 290315 CDS YP_001942123.1 189345594 6355559 43734..44690 1 NC_010803.1 PFAM: protein of unknown function DUF81; KEGG: pvi:Cvib_0032 protein of unknown function DUF81; hypothetical protein 44690 6355559 Clim_0036 Chlorobium limicola DSM 245 hypothetical protein YP_001942123.1 43734 D 290315 CDS YP_001942124.1 189345595 6355560 44687..45103 1 NC_010803.1 KEGG: cph:Cpha266_0122 hypothetical protein; hypothetical protein 45103 6355560 Clim_0037 Chlorobium limicola DSM 245 hypothetical protein YP_001942124.1 44687 D 290315 CDS YP_001942125.1 189345596 6355561 45263..45499 1 NC_010803.1 PFAM: SirA family protein; KEGG: plt:Plut_0033 hypothetical protein; SirA family protein 45499 6355561 Clim_0038 Chlorobium limicola DSM 245 SirA family protein YP_001942125.1 45263 D 290315 CDS YP_001942126.1 189345597 6355562 45514..46023 1 NC_010803.1 KEGG: cch:Cag_1961 hypothetical protein; hypothetical protein 46023 6355562 Clim_0039 Chlorobium limicola DSM 245 hypothetical protein YP_001942126.1 45514 D 290315 CDS YP_001942127.1 189345598 6355563 46395..46637 1 NC_010803.1 hypothetical protein 46637 6355563 Clim_0040 Chlorobium limicola DSM 245 hypothetical protein YP_001942127.1 46395 D 290315 CDS YP_001942128.1 189345599 6355564 complement(46674..48521) 1 NC_010803.1 KEGG: cph:Cpha266_0053 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; ATP-dependent DNA helicase RecQ 48521 6355564 Clim_0041 Chlorobium limicola DSM 245 ATP-dependent DNA helicase RecQ YP_001942128.1 46674 R 290315 CDS YP_001942129.1 189345600 6355565 complement(48872..49387) 1 NC_010803.1 KEGG: rci:RCIX2578 hypothetical protein; hypothetical protein 49387 6355565 Clim_0042 Chlorobium limicola DSM 245 hypothetical protein YP_001942129.1 48872 R 290315 CDS YP_001942130.1 189345601 6355566 49524..50258 1 NC_010803.1 PFAM: regulatory protein TetR; KEGG: cph:Cpha266_0060 TetR family transcriptional regulator; TetR family transcriptional regulator 50258 6355566 Clim_0043 Chlorobium limicola DSM 245 TetR family transcriptional regulator YP_001942130.1 49524 D 290315 CDS YP_001942131.1 189345602 6355567 50271..50735 1 NC_010803.1 KEGG: cph:Cpha266_0061 transmembrane protein; transmembrane protein 50735 6355567 Clim_0044 Chlorobium limicola DSM 245 transmembrane protein YP_001942131.1 50271 D 290315 CDS YP_001942132.1 189345603 6355568 50732..52027 1 NC_010803.1 KEGG: cph:Cpha266_0062 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 52027 6355568 Clim_0045 Chlorobium limicola DSM 245 NADPH-dependent FMN reductase YP_001942132.1 50732 D 290315 CDS YP_001942133.1 189345604 6355569 52218..52694 1 NC_010803.1 KEGG: cph:Cpha266_0064 hypothetical protein; hypothetical protein 52694 6355569 Clim_0046 Chlorobium limicola DSM 245 hypothetical protein YP_001942133.1 52218 D 290315 CDS YP_001942134.1 189345605 6355570 complement(52813..53358) 1 NC_010803.1 KEGG: fgr:FG06081.1 hypothetical protein; hypothetical protein 53358 6355570 Clim_0047 Chlorobium limicola DSM 245 hypothetical protein YP_001942134.1 52813 R 290315 CDS YP_001942135.1 189345606 6355571 complement(53452..54261) 1 NC_010803.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: tbd:Tbd_2169 hypothetical protein; type 11 methyltransferase 54261 6355571 Clim_0048 Chlorobium limicola DSM 245 type 11 methyltransferase YP_001942135.1 53452 R 290315 CDS YP_001942136.1 189345607 6355572 54740..55054 1 NC_010803.1 hypothetical protein 55054 6355572 Clim_0049 Chlorobium limicola DSM 245 hypothetical protein YP_001942136.1 54740 D 290315 CDS YP_001942137.1 189345608 6355573 complement(55088..55687) 1 NC_010803.1 KEGG: cph:Cpha266_0751 hypothetical protein; hypothetical protein 55687 6355573 Clim_0050 Chlorobium limicola DSM 245 hypothetical protein YP_001942137.1 55088 R 290315 CDS YP_001942138.1 189345609 6355574 complement(55694..56599) 1 NC_010803.1 PFAM: PASTA domain containing protein; KEGG: cph:Cpha266_0750 PASTA domain containing protein; protein PASTA domain-containing protein 56599 6355574 Clim_0051 Chlorobium limicola DSM 245 protein PASTA domain-containing protein YP_001942138.1 55694 R 290315 CDS YP_001942139.1 189345610 6355575 56965..59643 1 NC_010803.1 KEGG: cph:Cpha266_0063 hypothetical protein; hypothetical protein 59643 6355575 Clim_0052 Chlorobium limicola DSM 245 hypothetical protein YP_001942139.1 56965 D 290315 CDS YP_001942140.1 189345611 6355577 60329..61579 1 NC_010803.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: cph:Cpha266_0073 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 61579 6355577 Clim_0054 Chlorobium limicola DSM 245 DNA methylase N-4/N-6 domain-containing protein YP_001942140.1 60329 D 290315 CDS YP_001942141.1 189345612 6355578 61572..62210 1 NC_010803.1 KEGG: sat:SYN_02435 hypothetical cytosolic protein; hypothetical protein 62210 6355578 Clim_0055 Chlorobium limicola DSM 245 hypothetical protein YP_001942141.1 61572 D 290315 CDS YP_001942142.1 189345613 6355579 complement(62224..64206) 1 NC_010803.1 KEGG: pol:Bpro_0004 hypothetical protein; hypothetical protein 64206 6355579 Clim_0056 Chlorobium limicola DSM 245 hypothetical protein YP_001942142.1 62224 R 290315 CDS YP_001942143.1 189345614 6355580 complement(64216..64596) 1 NC_010803.1 hypothetical protein 64596 6355580 Clim_0057 Chlorobium limicola DSM 245 hypothetical protein YP_001942143.1 64216 R 290315 CDS YP_001942144.1 189345615 6355581 complement(64725..64904) 1 NC_010803.1 KEGG: cph:Cpha266_0084 hypothetical protein; hypothetical protein 64904 6355581 Clim_0058 Chlorobium limicola DSM 245 hypothetical protein YP_001942144.1 64725 R 290315 CDS YP_001942145.1 189345616 6355582 complement(64972..65916) 1 NC_010803.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: cph:Cpha266_0085 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 65916 6355582 Clim_0059 Chlorobium limicola DSM 245 4'-phosphopantetheinyl transferase YP_001942145.1 64972 R 290315 CDS YP_001942146.1 189345617 6355584 complement(66458..67396) 1 NC_010803.1 KEGG: cph:Cpha266_0086 hypothetical protein; hypothetical protein 67396 6355584 Clim_0061 Chlorobium limicola DSM 245 hypothetical protein YP_001942146.1 66458 R 290315 CDS YP_001942147.1 189345618 6355585 67692..69014 1 NC_010803.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: cph:Cpha266_0087 major facilitator superfamily MFS_1; major facilitator superfamily protein 69014 6355585 Clim_0062 Chlorobium limicola DSM 245 major facilitator superfamily protein YP_001942147.1 67692 D 290315 CDS YP_001942148.1 189345619 6355586 complement(69168..69746) 1 NC_010803.1 KEGG: cph:Cpha266_0088 hypothetical protein; hypothetical protein 69746 6355586 Clim_0063 Chlorobium limicola DSM 245 hypothetical protein YP_001942148.1 69168 R 290315 CDS YP_001942149.1 189345620 6355587 complement(69809..70216) 1 NC_010803.1 KEGG: cph:Cpha266_0089 Gifsy-1 prophage protein; Gifsy-1 prophage protein 70216 6355587 Clim_0064 Chlorobium limicola DSM 245 Gifsy-1 prophage protein YP_001942149.1 69809 R 290315 CDS YP_001942150.1 189345621 6355588 70582..71115 1 NC_010803.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: cph:Cpha266_0090 methionine-R-sulfoxide reductase; methionine-R-sulfoxide reductase 71115 6355588 Clim_0065 Chlorobium limicola DSM 245 methionine-R-sulfoxide reductase YP_001942150.1 70582 D 290315 CDS YP_001942151.1 189345622 6355589 complement(71112..71240) 1 NC_010803.1 KEGG: cph:Cpha266_0091 twitching mobility protein PilT; twitching mobility protein PilT 71240 6355589 Clim_0066 Chlorobium limicola DSM 245 twitching mobility protein PilT YP_001942151.1 71112 R 290315 CDS YP_001942152.1 189345623 6355590 complement(71237..71515) 1 NC_010803.1 PFAM: SpoVT/AbrB domain protein; KEGG: cph:Cpha266_0092 virulence associated protein B; SpoVT/AbrB domain-containing protein 71515 6355590 Clim_0067 Chlorobium limicola DSM 245 SpoVT/AbrB domain-containing protein YP_001942152.1 71237 R 290315 CDS YP_001942153.1 189345624 6355591 complement(71573..73159) 1 NC_010803.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cph:Cpha266_0093 drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 73159 6355591 Clim_0068 Chlorobium limicola DSM 245 EmrB/QacA subfamily drug resistance transporter YP_001942153.1 71573 R 290315 CDS YP_001942154.1 189345625 6355592 complement(73156..74151) 1 NC_010803.1 PFAM: secretion protein HlyD family protein; KEGG: cph:Cpha266_0094 secretion protein HlyD family protein; secretion protein HlyD family protein 74151 6355592 Clim_0069 Chlorobium limicola DSM 245 secretion protein HlyD family protein YP_001942154.1 73156 R 290315 CDS YP_001942155.1 189345626 6355593 complement(74151..74624) 1 NC_010803.1 PFAM: UspA domain protein; KEGG: cph:Cpha266_0095 UspA domain protein; UspA domain-containing protein 74624 6355593 Clim_0070 Chlorobium limicola DSM 245 UspA domain-containing protein YP_001942155.1 74151 R 290315 CDS YP_001942156.1 189345627 6355594 complement(74626..75951) 1 NC_010803.1 PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_0096 outer membrane efflux protein; outer membrane efflux protein 75951 6355594 Clim_0071 Chlorobium limicola DSM 245 outer membrane efflux protein YP_001942156.1 74626 R 290315 CDS YP_001942157.1 189345628 6355595 76218..78302 1 NC_010803.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: cph:Cpha266_0097 DNA-binding protein fis / Fis family transcriptional regulator; ATPase AAA 78302 6355595 Clim_0072 Chlorobium limicola DSM 245 ATPase AAA YP_001942157.1 76218 D 290315 CDS YP_001942158.1 189345629 6355596 complement(78710..79903) 1 NC_010803.1 PFAM: aminotransferase class I and II; KEGG: cte:CT0110 aminotransferase, class I; GntR family transcriptional regulator 79903 6355596 Clim_0073 Chlorobium limicola DSM 245 GntR family transcriptional regulator YP_001942158.1 78710 R 290315 CDS YP_001942159.1 189345630 6355597 complement(79968..80396) 1 NC_010803.1 PFAM: amino acid-binding ACT domain protein; KEGG: cph:Cpha266_1971 amino acid-binding ACT domain protein; amino acid-binding ACT domain-containing protein 80396 6355597 Clim_0074 Chlorobium limicola DSM 245 amino acid-binding ACT domain-containing protein YP_001942159.1 79968 R 290315 CDS YP_001942160.1 189345631 6355598 complement(80414..81715) 1 NC_010803.1 KEGG: cph:Cpha266_1968 phenylacetate-CoA ligase; phenylacetate--CoA ligase 81715 6355598 Clim_0075 Chlorobium limicola DSM 245 phenylacetate--CoA ligase YP_001942160.1 80414 R 290315 CDS YP_001942161.1 189345632 6355599 complement(81816..82409) 1 NC_010803.1 Involved in the incorporation of exogenous aryl acids in the biosynthesis of aromatic amino acids: catalysis of the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.; indolepyruvate oxidoreductase subunit beta 82409 6355599 Clim_0076 Chlorobium limicola DSM 245 indolepyruvate oxidoreductase subunit beta YP_001942161.1 81816 R 290315 CDS YP_001942162.1 189345633 6355600 complement(82415..84025) 1 NC_010803.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: cte:CT0114 ferredoxin oxidoreductase, alpha subunit; thiamine pyrophosphate domain-containing TPP-binding protein 84025 6355600 Clim_0077 Chlorobium limicola DSM 245 thiamine pyrophosphate domain-containing TPP-binding protein YP_001942162.1 82415 R 290315 CDS YP_001942163.1 189345634 6355601 complement(84212..85402) 1 NC_010803.1 KEGG: cte:CT0116 ArsA ATPase family protein; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; arsenite-activated ATPase ArsA 85402 6355601 Clim_0078 Chlorobium limicola DSM 245 arsenite-activated ATPase ArsA YP_001942163.1 84212 R 290315 CDS YP_001942164.1 189345635 6355602 85597..86442 1 NC_010803.1 KEGG: cph:Cpha266_0761 hypothetical protein; hypothetical protein 86442 6355602 Clim_0079 Chlorobium limicola DSM 245 hypothetical protein YP_001942164.1 85597 D 290315 CDS YP_001942165.1 189345636 6355603 86483..87373 1 NC_010803.1 KEGG: amr:AM1_H0103 hypothetical protein; hypothetical protein 87373 6355603 Clim_0080 Chlorobium limicola DSM 245 hypothetical protein YP_001942165.1 86483 D 290315 CDS YP_001942166.1 189345637 6355604 complement(87426..87971) 1 NC_010803.1 PFAM: nitroreductase; KEGG: cph:Cpha266_2684 nitroreductase; nitroreductase 87971 6355604 Clim_0081 Chlorobium limicola DSM 245 nitroreductase YP_001942166.1 87426 R 290315 CDS YP_001942167.1 189345638 6355605 complement(87955..88566) 1 NC_010803.1 KEGG: plt:Plut_0074 hypothetical protein; hypothetical protein 88566 6355605 Clim_0082 Chlorobium limicola DSM 245 hypothetical protein YP_001942167.1 87955 R 290315 CDS YP_001942168.1 189345639 6355606 complement(88727..89800) 1 NC_010803.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 89800 prfA 6355606 prfA Chlorobium limicola DSM 245 peptide chain release factor 1 YP_001942168.1 88727 R 290315 CDS YP_001942169.1 189345640 6355607 complement(89837..91198) 1 NC_010803.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: cph:Cpha266_2681 RseP peptidase. Metallo peptidase. MEROPS family M50B; membrane-associated zinc metalloprotease 91198 6355607 Clim_0084 Chlorobium limicola DSM 245 membrane-associated zinc metalloprotease YP_001942169.1 89837 R 290315 CDS YP_001942170.1 189345641 6355608 complement(91293..92441) 1 NC_010803.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 92441 6355608 Clim_0085 Chlorobium limicola DSM 245 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_001942170.1 91293 R 290315 CDS YP_001942171.1 189345642 6355610 complement(92753..93028) 1 NC_010803.1 catalyzes the hydrolysis of acylphosphate; acylphosphatase 93028 6355610 Clim_0086 Chlorobium limicola DSM 245 acylphosphatase YP_001942171.1 92753 R 290315 CDS YP_001942172.1 189345643 6355611 complement(93045..95129) 1 NC_010803.1 KEGG: cph:Cpha266_2678 FtsH-2 peptidase. Metallo peptidase. MEROPS family M41; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 95129 6355611 Clim_0087 Chlorobium limicola DSM 245 ATP-dependent metalloprotease FtsH YP_001942172.1 93045 R 290315 CDS YP_001942173.1 189345644 6355612 95392..96231 1 NC_010803.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: plt:Plut_0079 orotidine 5'-phosphate decarboxylase subfamily 2; orotidine 5'-phosphate decarboxylase 96231 6355612 Clim_0088 Chlorobium limicola DSM 245 orotidine 5'-phosphate decarboxylase YP_001942173.1 95392 D 290315 CDS YP_001942174.1 189345645 6355613 96341..98185 1 NC_010803.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 98185 6355613 Clim_0089 Chlorobium limicola DSM 245 glucosamine--fructose-6-phosphate aminotransferase YP_001942174.1 96341 D 290315 CDS YP_001942175.1 189345646 6355614 98212..98571 1 NC_010803.1 KEGG: cph:Cpha266_1070 hypothetical protein; hypothetical protein 98571 6355614 Clim_0090 Chlorobium limicola DSM 245 hypothetical protein YP_001942175.1 98212 D 290315 CDS YP_001942176.1 189345647 6355615 98703..99644 1 NC_010803.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; domain of unknown function DUF1731; KEGG: cph:Cpha266_2675 domain of unknown function DUF1731; hypothetical protein 99644 6355615 Clim_0091 Chlorobium limicola DSM 245 hypothetical protein YP_001942176.1 98703 D 290315 CDS YP_001942177.1 189345648 6355616 99749..100243 1 NC_010803.1 PFAM: Ferritin Dps family protein; KEGG: cph:Cpha266_2674 ferritin, Dps family protein; ferritin Dps family protein 100243 6355616 Clim_0092 Chlorobium limicola DSM 245 ferritin Dps family protein YP_001942177.1 99749 D 290315 CDS YP_001942178.1 189345649 6355617 complement(100322..100594) 1 NC_010803.1 PFAM: RNP-1 like RNA-binding protein; KEGG: cph:Cpha266_2673 RNP-1 like RNA-binding protein; RNP-1 like RNA-binding protein 100594 6355617 Clim_0093 Chlorobium limicola DSM 245 RNP-1 like RNA-binding protein YP_001942178.1 100322 R 290315 CDS YP_001942179.1 189345650 6355618 101052..102383 1 NC_010803.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: cph:Cpha266_2672 ammonium transporter; ammonium transporter 102383 6355618 Clim_0094 Chlorobium limicola DSM 245 ammonium transporter YP_001942179.1 101052 D 290315 CDS YP_001942180.1 189345651 6355619 102393..102734 1 NC_010803.1 PFAM: nitrogen regulatory protein P-II; KEGG: cch:Cag_1998 nitrogen regulatory protein P-II (GlnB, GlnK); nitrogen regulatory protein P-II 102734 6355619 Clim_0095 Chlorobium limicola DSM 245 nitrogen regulatory protein P-II YP_001942180.1 102393 D 290315 CDS YP_001942181.1 189345652 6355620 complement(102824..103399) 1 NC_010803.1 PFAM: hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: cph:Cpha266_2669 hypothetical protein; hypothetical protein 103399 6355620 Clim_0096 Chlorobium limicola DSM 245 hypothetical protein YP_001942181.1 102824 R 290315 CDS YP_001942182.1 189345653 6355621 103717..104442 1 NC_010803.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: plt:Plut_0093 segregation and condensation protein A; chromosome segregation and condensation protein ScpA 104442 6355621 Clim_0097 Chlorobium limicola DSM 245 chromosome segregation and condensation protein ScpA YP_001942182.1 103717 D 290315 CDS YP_001942183.1 189345654 6355622 104442..104921 1 NC_010803.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: wsu:WS0422 hypothetical protein; Glyoxalase/bleomycin resistance protein/dioxygenase 104921 6355622 Clim_0098 Chlorobium limicola DSM 245 Glyoxalase/bleomycin resistance protein/dioxygenase YP_001942183.1 104442 D 290315 CDS YP_001942184.1 189345655 6355623 105082..106356 1 NC_010803.1 PFAM: conserved hypothetical protein; KEGG: cph:Cpha266_2667 uncharacterised conserved protein UCP033563; hypothetical protein 106356 6355623 Clim_0099 Chlorobium limicola DSM 245 hypothetical protein YP_001942184.1 105082 D 290315 CDS YP_001942185.1 189345656 6355624 106358..106813 1 NC_010803.1 PFAM: protein of unknown function UPF0079; KEGG: cph:Cpha266_2666 protein of unknown function UPF0079; hypothetical protein 106813 6355624 Clim_0100 Chlorobium limicola DSM 245 hypothetical protein YP_001942185.1 106358 D 290315 CDS YP_001942186.1 189345657 6355625 106810..107490 1 NC_010803.1 PFAM: peptidase M22 glycoprotease; KEGG: cph:Cpha266_2665 peptidase M22, glycoprotease; peptidase M22 glycoprotease 107490 6355625 Clim_0101 Chlorobium limicola DSM 245 peptidase M22 glycoprotease YP_001942186.1 106810 D 290315 CDS YP_001942187.1 189345658 6355626 107538..107933 1 NC_010803.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: cph:Cpha266_2664 iojap-like protein; iojap family protein 107933 6355626 Clim_0102 Chlorobium limicola DSM 245 iojap family protein YP_001942187.1 107538 D 290315 CDS YP_001942188.1 189345659 6355627 108050..110536 1 NC_010803.1 KEGG: cph:Cpha266_2663 DNA gyrase subunit A; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA gyrase subunit A 110536 6355627 Clim_0103 Chlorobium limicola DSM 245 DNA gyrase subunit A YP_001942188.1 108050 D 290315 CDS YP_001942189.1 189345660 6355628 110588..110812 1 NC_010803.1 SMART: zinc finger CDGSH-type domain protein; KEGG: cph:Cpha266_2662 zinc finger, CDGSH-type domain protein; zinc finger CDGSH-type domain-containing protein 110812 6355628 Clim_0104 Chlorobium limicola DSM 245 zinc finger CDGSH-type domain-containing protein YP_001942189.1 110588 D 290315 CDS YP_001942190.1 189345661 6355817 110890..112599 1 NC_010803.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 112599 pyrG 6355817 pyrG Chlorobium limicola DSM 245 CTP synthetase YP_001942190.1 110890 D 290315 CDS YP_001942191.1 189345662 6356071 complement(118357..119022) 1 NC_010803.1 PFAM: RES domain protein; KEGG: gur:Gura_0589 hypothetical protein; RES domain-containing protein 119022 6356071 Clim_0106 Chlorobium limicola DSM 245 RES domain-containing protein YP_001942191.1 118357 R 290315 CDS YP_001942192.1 189345663 6356072 complement(119054..119434) 1 NC_010803.1 KEGG: pvi:Cvib_0659 hypothetical protein; hypothetical protein 119434 6356072 Clim_0107 Chlorobium limicola DSM 245 hypothetical protein YP_001942192.1 119054 R 290315 CDS YP_001942193.1 189345664 6356074 complement(119993..121300) 1 NC_010803.1 PFAM: HipA domain protein; KEGG: cph:Cpha266_2264 HipA domain protein; HipA domain-containing protein 121300 6356074 Clim_0109 Chlorobium limicola DSM 245 HipA domain-containing protein YP_001942193.1 119993 R 290315 CDS YP_001942194.1 189345665 6356075 complement(121297..121644) 1 NC_010803.1 SMART: helix-turn-helix domain protein; KEGG: cph:Cpha266_2265 helix-turn-helix domain protein; XRE family transcriptional regulator 121644 6356075 Clim_0110 Chlorobium limicola DSM 245 XRE family transcriptional regulator YP_001942194.1 121297 R 290315 CDS YP_001942195.1 189345666 6356077 121989..122258 1 NC_010803.1 KEGG: cph:Cpha266_1216 hypothetical protein; hypothetical protein 122258 6356077 Clim_0112 Chlorobium limicola DSM 245 hypothetical protein YP_001942195.1 121989 D 290315 CDS YP_001942196.1 189345667 6356078 122258..122536 1 NC_010803.1 PFAM: plasmid stabilization system; KEGG: cph:Cpha266_1217 plasmid stabilization system; plasmid stabilization system 122536 6356078 Clim_0113 Chlorobium limicola DSM 245 plasmid stabilization system YP_001942196.1 122258 D 290315 CDS YP_001942197.1 189345668 6356081 complement(123483..124580) 1 NC_010803.1 PFAM: Domain of unknown function DUF1814; KEGG: cph:Cpha266_0782 hypothetical protein; hypothetical protein 124580 6356081 Clim_0116 Chlorobium limicola DSM 245 hypothetical protein YP_001942197.1 123483 R 290315 CDS YP_001942198.1 189345669 6356082 complement(124577..125359) 1 NC_010803.1 KEGG: cph:Cpha266_0781 hypothetical protein; hypothetical protein 125359 6356082 Clim_0117 Chlorobium limicola DSM 245 hypothetical protein YP_001942198.1 124577 R 290315 CDS YP_001942199.1 189345670 6356083 125664..125873 1 NC_010803.1 hypothetical protein 125873 6356083 Clim_0118 Chlorobium limicola DSM 245 hypothetical protein YP_001942199.1 125664 D 290315 CDS YP_001942200.1 189345671 6356084 complement(126030..126842) 1 NC_010803.1 PFAM: IstB domain protein ATP-binding protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: cph:Cpha266_2659 IstB domain protein ATP-binding protein; IstB domain-containing protein ATP-binding protein 126842 6356084 Clim_0119 Chlorobium limicola DSM 245 IstB domain-containing protein ATP-binding protein YP_001942200.1 126030 R 290315 CDS YP_001942201.1 189345672 6356087 complement(128838..129065) 1 NC_010803.1 KEGG: ava:Ava_1156 type I site-specific deoxyribonuclease HsdR; type I site-specific deoxyribonuclease HsdR 129065 6356087 Clim_0122 Chlorobium limicola DSM 245 type I site-specific deoxyribonuclease HsdR YP_001942201.1 128838 R 290315 CDS YP_001942202.1 189345673 6356088 complement(129148..134529) 1 NC_010803.1 KEGG: noc:Noc_0639 hypothetical protein; hypothetical protein 134529 6356088 Clim_0123 Chlorobium limicola DSM 245 hypothetical protein YP_001942202.1 129148 R 290315 CDS YP_001942203.1 189345674 6356089 complement(134646..134984) 1 NC_010803.1 hypothetical protein 134984 6356089 Clim_0124 Chlorobium limicola DSM 245 hypothetical protein YP_001942203.1 134646 R 290315 CDS YP_001942204.1 189345675 6356090 complement(135020..135637) 1 NC_010803.1 KEGG: wsu:WS1135 hypothetical protein; hypothetical protein 135637 6356090 Clim_0125 Chlorobium limicola DSM 245 hypothetical protein YP_001942204.1 135020 R 290315 CDS YP_001942205.1 189345676 6356091 complement(135612..136343) 1 NC_010803.1 hypothetical protein 136343 6356091 Clim_0126 Chlorobium limicola DSM 245 hypothetical protein YP_001942205.1 135612 R 290315 CDS YP_001942206.1 189345677 6356092 complement(136347..138956) 1 NC_010803.1 KEGG: pau:PA14_15610 hypothetical protein; hypothetical protein 138956 6356092 Clim_0127 Chlorobium limicola DSM 245 hypothetical protein YP_001942206.1 136347 R 290315 CDS YP_001942207.1 189345678 6356093 complement(138953..141493) 1 NC_010803.1 PFAM: restriction modification system DNA specificity domain; N-6 DNA methylase; KEGG: cph:Cpha266_0895 N-6 DNA methylase; N-6 DNA methylase 141493 6356093 Clim_0128 Chlorobium limicola DSM 245 N-6 DNA methylase YP_001942207.1 138953 R 290315 CDS YP_001942208.1 189345679 6356094 complement(141506..144046) 1 NC_010803.1 PFAM: type III restriction protein res subunit; protein of unknown function DUF450; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: cph:Cpha266_0896 type III restriction enzyme, res subunit; type III restriction protein res subunit 144046 6356094 Clim_0129 Chlorobium limicola DSM 245 type III restriction protein res subunit YP_001942208.1 141506 R 290315 CDS YP_001942209.1 189345680 6356095 144336..144782 1 NC_010803.1 KEGG: cph:Cpha266_0759 hypothetical protein; hypothetical protein 144782 6356095 Clim_0130 Chlorobium limicola DSM 245 hypothetical protein YP_001942209.1 144336 D 290315 CDS YP_001942210.1 189345681 6356096 144990..145358 1 NC_010803.1 PFAM: regulatory protein ArsR; KEGG: cph:Cpha266_0758 ArsR family transcriptional regulator; ArsR family transcriptional regulator 145358 6356096 Clim_0131 Chlorobium limicola DSM 245 ArsR family transcriptional regulator YP_001942210.1 144990 D 290315 CDS YP_001942211.1 189345682 6356097 145571..146662 1 NC_010803.1 PFAM: permease; KEGG: cph:Cpha266_0757 permease; permease 146662 6356097 Clim_0132 Chlorobium limicola DSM 245 permease YP_001942211.1 145571 D 290315 CDS YP_001942212.1 189345683 6356098 146807..147508 1 NC_010803.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cph:Cpha266_0756 PHP C-terminal domain protein; PHP domain-containing protein 147508 6356098 Clim_0133 Chlorobium limicola DSM 245 PHP domain-containing protein YP_001942212.1 146807 D 290315 CDS YP_001942213.1 189345684 6356099 complement(147556..149754) 1 NC_010803.1 TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: cph:Cpha266_0755 catalase/peroxidase HPI; catalase/peroxidase HPI 149754 6356099 Clim_0134 Chlorobium limicola DSM 245 catalase/peroxidase HPI YP_001942213.1 147556 R 290315 CDS YP_001942214.1 189345685 6356100 complement(149922..150341) 1 NC_010803.1 PFAM: ferric-uptake regulator; KEGG: cph:Cpha266_0754 ferric uptake regulator, Fur family; Fur family ferric uptake regulator 150341 6356100 Clim_0135 Chlorobium limicola DSM 245 Fur family ferric uptake regulator YP_001942214.1 149922 R 290315 CDS YP_001942215.1 189345686 6356101 150641..150868 1 NC_010803.1 KEGG: cph:Cpha266_0752 hypothetical protein; hypothetical protein 150868 6356101 Clim_0136 Chlorobium limicola DSM 245 hypothetical protein YP_001942215.1 150641 D 290315 CDS YP_001942216.1 189345687 6356102 150872..152245 1 NC_010803.1 KEGG: cph:Cpha266_0752 hypothetical protein; hypothetical protein 152245 6356102 Clim_0137 Chlorobium limicola DSM 245 hypothetical protein YP_001942216.1 150872 D 290315 CDS YP_001942217.1 189345688 6356103 152436..154262 1 NC_010803.1 PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cph:Cpha266_2592 magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase; radical SAM protein 154262 6356103 Clim_0138 Chlorobium limicola DSM 245 radical SAM protein YP_001942217.1 152436 D 290315 CDS YP_001942218.1 189345689 6356104 154314..154976 1 NC_010803.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cph:Cpha266_2591 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase 154976 6356104 Clim_0139 Chlorobium limicola DSM 245 HAD-superfamily hydrolase YP_001942218.1 154314 D 290315 CDS YP_001942219.1 189345690 6356105 154991..156472 1 NC_010803.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: cph:Cpha266_2590 glycerol kinase; glycerol kinase 156472 6356105 Clim_0140 Chlorobium limicola DSM 245 glycerol kinase YP_001942219.1 154991 D 290315 CDS YP_001942220.1 189345691 6356107 complement(156701..157966) 1 NC_010803.1 KEGG: plt:Plut_0585 hypothetical protein; hypothetical protein 157966 6356107 Clim_0142 Chlorobium limicola DSM 245 hypothetical protein YP_001942220.1 156701 R 290315 CDS YP_001942221.1 189345692 6356113 163926..164342 1 NC_010803.1 PFAM: thioesterase superfamily protein; KEGG: cph:Cpha266_2516 thioesterase superfamily protein; thioesterase superfamily protein 164342 6356113 Clim_0143 Chlorobium limicola DSM 245 thioesterase superfamily protein YP_001942221.1 163926 D 290315 CDS YP_001942222.1 189345693 6356114 164617..165144 1 NC_010803.1 KEGG: cph:Cpha266_2515 hypothetical protein; hypothetical protein 165144 6356114 Clim_0144 Chlorobium limicola DSM 245 hypothetical protein YP_001942222.1 164617 D 290315 CDS YP_001942223.1 189345694 6356115 165154..166158 1 NC_010803.1 PFAM: glycosyl transferase family 9; KEGG: cph:Cpha266_2514 glycosyl transferase, family 9; glycosyl transferase family protein 166158 6356115 Clim_0145 Chlorobium limicola DSM 245 glycosyl transferase family protein YP_001942223.1 165154 D 290315 CDS YP_001942224.1 189345695 6356116 166155..166931 1 NC_010803.1 KEGG: cph:Cpha266_2513 exodeoxyribonuclease III Xth; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth 166931 6356116 Clim_0146 Chlorobium limicola DSM 245 exodeoxyribonuclease III Xth YP_001942224.1 166155 D 290315 CDS YP_001942225.1 189345696 6356117 167199..167600 1 NC_010803.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 167600 rpsF 6356117 rpsF Chlorobium limicola DSM 245 30S ribosomal protein S6 YP_001942225.1 167199 D 290315 CDS YP_001942226.1 189345697 6356118 167667..168140 1 NC_010803.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cph:Cpha266_2511 single-strand binding protein; single-strand binding protein 168140 6356118 Clim_0148 Chlorobium limicola DSM 245 single-strand binding protein YP_001942226.1 167667 D 290315 CDS YP_001942227.1 189345698 6356119 168178..168441 1 NC_010803.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 168441 rpsR 6356119 rpsR Chlorobium limicola DSM 245 30S ribosomal protein S18 YP_001942227.1 168178 D 290315 CDS YP_001942228.1 189345699 6356120 168479..168934 1 NC_010803.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 168934 rplI 6356120 rplI Chlorobium limicola DSM 245 50S ribosomal protein L9 YP_001942228.1 168479 D 290315 CDS YP_001942229.1 189345700 6356121 169120..169521 1 NC_010803.1 KEGG: cph:Cpha266_2508 hypothetical protein; hypothetical protein 169521 6356121 Clim_0151 Chlorobium limicola DSM 245 hypothetical protein YP_001942229.1 169120 D 290315 CDS YP_001942230.1 189345701 6356122 complement(169656..170681) 1 NC_010803.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 170681 pheS 6356122 pheS Chlorobium limicola DSM 245 phenylalanyl-tRNA synthetase subunit alpha YP_001942230.1 169656 R 290315 CDS YP_001942231.1 189345702 6356123 complement(170699..171046) 1 NC_010803.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 171046 rplT 6356123 rplT Chlorobium limicola DSM 245 50S ribosomal protein L20 YP_001942231.1 170699 R 290315 CDS YP_001942232.1 189345703 6356124 complement(171073..171267) 1 NC_010803.1 PFAM: ribosomal protein L35; KEGG: cte:CT2128 50S ribosomal protein L35; 50S ribosomal protein L35 171267 rpmI 6356124 rpmI Chlorobium limicola DSM 245 50S ribosomal protein L35 YP_001942232.1 171073 R 290315 CDS YP_001942233.1 189345704 6356125 complement(171300..171941) 1 NC_010803.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 171941 infC 6356125 infC Chlorobium limicola DSM 245 translation initiation factor IF-3 YP_001942233.1 171300 R 290315 CDS YP_001942234.1 189345705 6356126 complement(171965..173938) 1 NC_010803.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 173938 thrS 6356126 thrS Chlorobium limicola DSM 245 threonyl-tRNA synthetase YP_001942234.1 171965 R 290315 CDS YP_001942235.1 189345706 6356127 complement(174146..175555) 1 NC_010803.1 TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase component 1; protein of unknown function DUF1197; KEGG: cph:Cpha266_2500 chlorophyllide reductase subunit Z; chlorophyllide reductase subunit Z 175555 6356127 Clim_0157 Chlorobium limicola DSM 245 chlorophyllide reductase subunit Z YP_001942235.1 174146 R 290315 CDS YP_001942236.1 189345707 6356128 complement(175599..177347) 1 NC_010803.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: cph:Cpha266_2499 glycoside hydrolase, family 3 domain protein; glycoside hydrolase family protein 177347 6356128 Clim_0158 Chlorobium limicola DSM 245 glycoside hydrolase family protein YP_001942236.1 175599 R 290315 CDS YP_001942237.1 189345708 6356129 177706..178806 1 NC_010803.1 PFAM: Asparaginase/glutaminase; KEGG: pgi:PG2121 L-asparaginase; 1-alkyl-2-acetylglycerophosphocholine esterase 178806 6356129 Clim_0159 Chlorobium limicola DSM 245 1-alkyl-2-acetylglycerophosphocholine esterase YP_001942237.1 177706 D 290315 CDS YP_001942238.1 189345709 6356130 complement(178825..179163) 1 NC_010803.1 KEGG: cph:Cpha266_2498 CMP/dCMP deaminase, zinc-binding; zinc-binding CMP/dCMP deaminase 179163 6356130 Clim_0160 Chlorobium limicola DSM 245 zinc-binding CMP/dCMP deaminase YP_001942238.1 178825 R 290315 CDS YP_001942239.1 189345710 6356131 complement(179330..180892) 1 NC_010803.1 PFAM: transposase IS4 family protein; KEGG: amt:Amet_3130 transposase, IS4 family protein; transposase IS4 family protein 180892 6356131 Clim_0161 Chlorobium limicola DSM 245 transposase IS4 family protein YP_001942239.1 179330 R 290315 CDS YP_001942240.1 189345711 6356132 complement(181160..181672) 1 NC_010803.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: pvi:Cvib_0193 HNH endonuclease; HNH endonuclease 181672 6356132 Clim_0162 Chlorobium limicola DSM 245 HNH endonuclease YP_001942240.1 181160 R 290315 CDS YP_001942241.1 189345712 6356133 complement(181826..183286) 1 NC_010803.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 183286 6356133 Clim_0163 Chlorobium limicola DSM 245 glycine dehydrogenase subunit 2 YP_001942241.1 181826 R 290315 CDS YP_001942242.1 189345713 6356134 complement(183404..184225) 1 NC_010803.1 PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: cph:Cpha266_2495 ribonuclease III; Ribonuclease III 184225 6356134 Clim_0164 Chlorobium limicola DSM 245 Ribonuclease III YP_001942242.1 183404 R 290315 CDS YP_001942243.1 189345714 6355818 complement(184239..185495) 1 NC_010803.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: cph:Cpha266_2494 3-oxoacyl-[acyl-carrier-protein] synthase II; 3-oxoacyl-(acyl-carrier-protein) synthase 2 185495 6355818 Clim_0165 Chlorobium limicola DSM 245 3-oxoacyl-(acyl-carrier-protein) synthase 2 YP_001942243.1 184239 R 290315 CDS YP_001942244.1 189345715 6355819 complement(185544..185780) 1 NC_010803.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 185780 acpP 6355819 acpP Chlorobium limicola DSM 245 acyl carrier protein YP_001942244.1 185544 R 290315 CDS YP_001942245.1 189345716 6355820 complement(185866..186603) 1 NC_010803.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: plt:Plut_0131 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase 186603 6355820 Clim_0167 Chlorobium limicola DSM 245 3-oxoacyl-(acyl-carrier-protein) reductase YP_001942245.1 185866 R 290315 CDS YP_001942246.1 189345717 6355821 complement(186658..187566) 1 NC_010803.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: cph:Cpha266_2491 [acyl-carrier-protein] S-malonyltransferase; malonyl CoA-acyl carrier protein transacylase 187566 6355821 Clim_0168 Chlorobium limicola DSM 245 malonyl CoA-acyl carrier protein transacylase YP_001942246.1 186658 R 290315 CDS YP_001942247.1 189345718 6355822 complement(187597..188583) 1 NC_010803.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 188583 6355822 Clim_0169 Chlorobium limicola DSM 245 3-oxoacyl-ACP synthase YP_001942247.1 187597 R 290315 CDS YP_001942248.1 189345719 6355823 complement(188681..189706) 1 NC_010803.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 189706 6355823 Clim_0170 Chlorobium limicola DSM 245 glycerol-3-phosphate acyltransferase PlsX YP_001942248.1 188681 R 290315 CDS YP_001942249.1 189345720 6355824 complement(189735..189926) 1 NC_010803.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 189926 rpmF 6355824 rpmF Chlorobium limicola DSM 245 50S ribosomal protein L32 YP_001942249.1 189735 R 290315 CDS YP_001942250.1 189345721 6355825 complement(189952..190479) 1 NC_010803.1 PFAM: protein of unknown function DUF177; KEGG: cte:CT2111 hypothetical protein; hypothetical protein 190479 6355825 Clim_0172 Chlorobium limicola DSM 245 hypothetical protein YP_001942250.1 189952 R 290315 CDS YP_001942251.1 189345722 6355827 191009..191668 1 NC_010803.1 KEGG: plt:Plut_0330 uridine kinase-like; uridine kinase-like protein 191668 6355827 Clim_0173 Chlorobium limicola DSM 245 uridine kinase-like protein YP_001942251.1 191009 D 290315 CDS YP_001942252.1 189345723 6355828 191750..193246 1 NC_010803.1 KEGG: cph:Cpha266_1834 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor protein 193246 6355828 Clim_0174 Chlorobium limicola DSM 245 PAS/PAC sensor protein YP_001942252.1 191750 D 290315 CDS YP_001942253.1 189345724 6355829 193271..193966 1 NC_010803.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: plt:Plut_1358 PAS/PAC sensor signal transduction histidine kinase; histidine kinase 193966 6355829 Clim_0175 Chlorobium limicola DSM 245 histidine kinase YP_001942253.1 193271 D 290315 CDS YP_001942254.1 189345725 6355830 193979..194353 1 NC_010803.1 PFAM: response regulator receiver; KEGG: tle:Tlet_0986 two component transcriptional regulator, winged helix family; response regulator receiver protein 194353 6355830 Clim_0176 Chlorobium limicola DSM 245 response regulator receiver protein YP_001942254.1 193979 D 290315 CDS YP_001942255.1 189345726 6355831 complement(194424..194600) 1 NC_010803.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: plt:Plut_1978 rubredoxin-like; rubredoxin-type Fe(Cys)4 protein 194600 6355831 Clim_0177 Chlorobium limicola DSM 245 rubredoxin-type Fe(Cys)4 protein YP_001942255.1 194424 R 290315 CDS YP_001942256.1 189345727 6355832 195058..195726 1 NC_010803.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; KEGG: drm:Dred_0778 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 195726 6355832 Clim_0178 Chlorobium limicola DSM 245 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001942256.1 195058 D 290315 CDS YP_001942257.1 189345728 6355833 complement(195755..197065) 1 NC_010803.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: cph:Cpha266_0167 glutamate dehydrogenase (NAD/NADP); Glu/Leu/Phe/Val dehydrogenase 197065 6355833 Clim_0179 Chlorobium limicola DSM 245 Glu/Leu/Phe/Val dehydrogenase YP_001942257.1 195755 R 290315 CDS YP_001942258.1 189345729 6355834 complement(197234..198091) 1 NC_010803.1 PFAM: protein of unknown function DUF52; KEGG: mgm:Mmc1_2152 protein of unknown function DUF52; hypothetical protein 198091 6355834 Clim_0180 Chlorobium limicola DSM 245 hypothetical protein YP_001942258.1 197234 R 290315 CDS YP_001942259.1 189345730 6355835 complement(198250..199068) 1 NC_010803.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 199068 dapF 6355835 dapF Chlorobium limicola DSM 245 diaminopimelate epimerase YP_001942259.1 198250 R 290315 CDS YP_001942260.1 189345731 6355837 199470..201665 1 NC_010803.1 KEGG: cph:Cpha266_0219 photosystem P840 reaction center, large subunit; photosystem P840 reaction center, large subunit 201665 6355837 Clim_0182 Chlorobium limicola DSM 245 photosystem P840 reaction center, large subunit YP_001942260.1 199470 D 290315 CDS YP_001942261.1 189345732 6354635 201754..202431 1 NC_010803.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cph:Cpha266_0220 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 202431 6354635 Clim_0183 Chlorobium limicola DSM 245 4Fe-4S ferredoxin YP_001942261.1 201754 D 290315 CDS YP_001942262.1 189345733 6354636 202549..203298 1 NC_010803.1 PFAM: glycosyl transferase family 2; KEGG: plt:Plut_1974 dolichyl-phosphate beta-D-mannosyltransferase; dolichyl-phosphate beta-D-mannosyltransferase 203298 6354636 Clim_0184 Chlorobium limicola DSM 245 dolichyl-phosphate beta-D-mannosyltransferase YP_001942262.1 202549 D 290315 CDS YP_001942263.1 189345734 6354637 complement(203359..205434) 1 NC_010803.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 205434 6354637 Clim_0185 Chlorobium limicola DSM 245 elongation factor G YP_001942263.1 203359 R 290315 CDS YP_001942264.1 189345735 6354638 205821..207134 1 NC_010803.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 207134 eno 6354638 eno Chlorobium limicola DSM 245 phosphopyruvate hydratase YP_001942264.1 205821 D 290315 CDS YP_001942265.1 189345736 6354639 207248..207556 1 NC_010803.1 PFAM: Septum formation initiator; KEGG: cph:Cpha266_0224 septum formation initiator; septum formation initiator 207556 6354639 Clim_0187 Chlorobium limicola DSM 245 septum formation initiator YP_001942265.1 207248 D 290315 CDS YP_001942266.1 189345737 6354640 207593..209632 1 NC_010803.1 KEGG: cph:Cpha266_0225 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 209632 6354640 Clim_0188 Chlorobium limicola DSM 245 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_001942266.1 207593 D 290315 CDS YP_001942267.1 189345738 6354641 209646..210449 1 NC_010803.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cph:Cpha266_0226 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 210449 6354641 Clim_0189 Chlorobium limicola DSM 245 short-chain dehydrogenase/reductase SDR YP_001942267.1 209646 D 290315 CDS YP_001942268.1 189345739 6354646 210932..211123 1 NC_010803.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 211123 secE 6354646 secE Chlorobium limicola DSM 245 preprotein translocase subunit SecE YP_001942268.1 210932 D 290315 CDS YP_001942269.1 189345740 6354647 211146..211721 1 NC_010803.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KEGG: cph:Cpha266_0228 transcription antitermination protein NusG; NusG antitermination factor 211721 6354647 Clim_0191 Chlorobium limicola DSM 245 NusG antitermination factor YP_001942269.1 211146 D 290315 CDS YP_001942270.1 189345741 6354648 211767..212192 1 NC_010803.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 212192 rplK 6354648 rplK Chlorobium limicola DSM 245 50S ribosomal protein L11 YP_001942270.1 211767 D 290315 CDS YP_001942271.1 189345742 6354649 212263..212952 1 NC_010803.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 212952 rplA 6354649 rplA Chlorobium limicola DSM 245 50S ribosomal protein L1 YP_001942271.1 212263 D 290315 CDS YP_001942272.1 189345743 6354650 212970..213488 1 NC_010803.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 213488 rplJ 6354650 rplJ Chlorobium limicola DSM 245 50S ribosomal protein L10 YP_001942272.1 212970 D 290315 CDS YP_001942273.1 189345744 6354651 213557..213934 1 NC_010803.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 213934 rplL 6354651 rplL Chlorobium limicola DSM 245 50S ribosomal protein L7/L12 YP_001942273.1 213557 D 290315 CDS YP_001942274.1 189345745 6354652 214117..218055 1 NC_010803.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 218055 rpoB 6354652 rpoB Chlorobium limicola DSM 245 DNA-directed RNA polymerase subunit beta YP_001942274.1 214117 D 290315 CDS YP_001942275.1 189345746 6354653 218126..222616 1 NC_010803.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 222616 6354653 Clim_0197 Chlorobium limicola DSM 245 DNA-directed RNA polymerase subunit beta' YP_001942275.1 218126 D 290315 CDS YP_001942276.1 189345747 6354654 complement(222808..224151) 1 NC_010803.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: plt:Plut_1960 acetyl-CoA carboxylase, biotin carboxylase; acetyl-CoA carboxylase, biotin carboxylase 224151 6354654 Clim_0198 Chlorobium limicola DSM 245 acetyl-CoA carboxylase, biotin carboxylase YP_001942276.1 222808 R 290315 CDS YP_001942277.1 189345748 6354655 complement(224173..224658) 1 NC_010803.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: cph:Cpha266_0236 biotin carboxyl carrier protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 224658 6354655 Clim_0199 Chlorobium limicola DSM 245 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_001942277.1 224173 R 290315 CDS YP_001942278.1 189345749 6354656 complement(224695..225261) 1 NC_010803.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 225261 6354656 Clim_0200 Chlorobium limicola DSM 245 elongation factor P YP_001942278.1 224695 R 290315 CDS YP_001942279.1 189345750 6354657 225460..225735 1 NC_010803.1 PFAM: histone family protein DNA-binding protein; KEGG: cte:CT0160 DNA-binding protein HU-beta; histone family protein DNA-binding protein 225735 6354657 Clim_0201 Chlorobium limicola DSM 245 histone family protein DNA-binding protein YP_001942279.1 225460 D 290315 CDS YP_001942280.1 189345751 6354658 225826..226827 1 NC_010803.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 226827 6354658 Clim_0202 Chlorobium limicola DSM 245 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_001942280.1 225826 D 290315 CDS YP_001942281.1 189345752 6354659 complement(226940..227968) 1 NC_010803.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 227968 6354659 Clim_0203 Chlorobium limicola DSM 245 2-oxoglutarate ferredoxin oxidoreductase subunit beta YP_001942281.1 226940 R 290315 CDS YP_001942282.1 189345753 6354660 complement(227972..229855) 1 NC_010803.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cph:Cpha266_0241 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 229855 6354660 Clim_0204 Chlorobium limicola DSM 245 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_001942282.1 227972 R 290315 CDS YP_001942283.1 189345754 6354661 complement(230056..230325) 1 NC_010803.1 KEGG: cph:Cpha266_0242 hypothetical protein; hypothetical protein 230325 6354661 Clim_0205 Chlorobium limicola DSM 245 hypothetical protein YP_001942283.1 230056 R 290315 CDS YP_001942284.1 189345755 6354662 230580..233246 1 NC_010803.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 233246 alaS 6354662 alaS Chlorobium limicola DSM 245 alanyl-tRNA synthetase YP_001942284.1 230580 D 290315 CDS YP_001942285.1 189345756 6354663 233261..234616 1 NC_010803.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: cph:Cpha266_0244 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 234616 6354663 Clim_0207 Chlorobium limicola DSM 245 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001942285.1 233261 D 290315 CDS YP_001942286.1 189345757 6354664 234666..235160 1 NC_010803.1 KEGG: cph:Cpha266_0245 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 235160 6354664 Clim_0208 Chlorobium limicola DSM 245 4Fe-4S ferredoxin YP_001942286.1 234666 D 290315 CDS YP_001942287.1 189345758 6354665 235188..235496 1 NC_010803.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cph:Cpha266_0246 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 235496 6354665 Clim_0209 Chlorobium limicola DSM 245 4Fe-4S ferredoxin YP_001942287.1 235188 D 290315 CDS YP_001942288.1 189345759 6354666 complement(235552..236508) 1 NC_010803.1 PFAM: HipA domain protein; KEGG: cph:Cpha266_0247 HipA domain protein; HipA domain-containing protein 236508 6354666 Clim_0210 Chlorobium limicola DSM 245 HipA domain-containing protein YP_001942288.1 235552 R 290315 CDS YP_001942289.1 189345760 6354667 complement(236513..236836) 1 NC_010803.1 TIGRFAM: HipA N-terminal domain protein; KEGG: cph:Cpha266_0248 hypothetical protein; HipA N-terminal domain-containing protein 236836 6354667 Clim_0211 Chlorobium limicola DSM 245 HipA N-terminal domain-containing protein YP_001942289.1 236513 R 290315 CDS YP_001942290.1 189345761 6354668 complement(236840..237046) 1 NC_010803.1 TIGRFAM: transcriptional regulator, y4mF family; PFAM: helix-turn-helix domain protein; KEGG: cph:Cpha266_0249 XRE family transcriptional regulator; XRE family transcriptional regulator 237046 6354668 Clim_0212 Chlorobium limicola DSM 245 XRE family transcriptional regulator YP_001942290.1 236840 R 290315 CDS YP_001942291.1 189345762 6354669 complement(237369..238316) 1 NC_010803.1 PFAM: Domain of unknown function DUF1814; KEGG: ajs:Ajs_1569 hypothetical protein; hypothetical protein 238316 6354669 Clim_0213 Chlorobium limicola DSM 245 hypothetical protein YP_001942291.1 237369 R 290315 CDS YP_001942292.1 189345763 6354670 complement(238294..238716) 1 NC_010803.1 KEGG: cph:Cpha266_0646 hypothetical protein; hypothetical protein 238716 6354670 Clim_0214 Chlorobium limicola DSM 245 hypothetical protein YP_001942292.1 238294 R 290315 CDS YP_001942293.1 189345764 6354671 complement(238735..238905) 1 NC_010803.1 hypothetical protein 238905 6354671 Clim_0215 Chlorobium limicola DSM 245 hypothetical protein YP_001942293.1 238735 R 290315 CDS YP_001942294.1 189345765 6354672 complement(239055..240272) 1 NC_010803.1 KEGG: cph:Cpha266_0250 phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: amino acid-binding ACT domain protein; Haloacid dehalogenase domain protein hydrolase; Haloacid dehalogenase domain protein hydrolase type 3; phosphoserine phosphatase SerB 240272 6354672 Clim_0216 Chlorobium limicola DSM 245 phosphoserine phosphatase SerB YP_001942294.1 239055 R 290315 CDS YP_001942295.1 189345766 6354673 240339..240596 1 NC_010803.1 KEGG: cph:Cpha266_0270 hypothetical protein; hypothetical protein 240596 6354673 Clim_0217 Chlorobium limicola DSM 245 hypothetical protein YP_001942295.1 240339 D 290315 CDS YP_001942296.1 189345767 6354674 240751..241971 1 NC_010803.1 KEGG: pvi:Cvib_1663 hypothetical protein; hypothetical protein 241971 6354674 Clim_0218 Chlorobium limicola DSM 245 hypothetical protein YP_001942296.1 240751 D 290315 CDS YP_001942297.1 189345768 6354676 242705..244129 1 NC_010803.1 KEGG: pvi:Cvib_1663 hypothetical protein; hypothetical protein 244129 6354676 Clim_0220 Chlorobium limicola DSM 245 hypothetical protein YP_001942297.1 242705 D 290315 CDS YP_001942298.1 189345769 6354677 complement(244392..245063) 1 NC_010803.1 PFAM: integrase; KEGG: pna:Pnap_4798 phage integrase family protein; integrase 245063 6354677 Clim_0221 Chlorobium limicola DSM 245 integrase YP_001942298.1 244392 R 290315 CDS YP_001942299.1 189345770 6354678 245244..246290 1 NC_010803.1 PFAM: transposase IS4 family protein; KEGG: dol:Dole_3091 transposase IS4 family protein; transposase IS4 family protein 246290 6354678 Clim_0222 Chlorobium limicola DSM 245 transposase IS4 family protein YP_001942299.1 245244 D 290315 CDS YP_001942300.1 189345771 6354679 246622..252915 1 NC_010803.1 KEGG: fjo:Fjoh_3535 hypothetical protein; hypothetical protein 252915 6354679 Clim_0223 Chlorobium limicola DSM 245 hypothetical protein YP_001942300.1 246622 D 290315 CDS YP_001942301.1 189345772 6354680 252893..253594 1 NC_010803.1 KEGG: fjo:Fjoh_3534 hypothetical protein; hypothetical protein 253594 6354680 Clim_0224 Chlorobium limicola DSM 245 hypothetical protein YP_001942301.1 252893 D 290315 CDS YP_001942302.1 189345773 6354682 254450..255070 1 NC_010803.1 hypothetical protein 255070 6354682 Clim_0226 Chlorobium limicola DSM 245 hypothetical protein YP_001942302.1 254450 D 290315 CDS YP_001942303.1 189345774 6354683 complement(255185..256552) 1 NC_010803.1 PFAM: transposase IS4 family protein; KEGG: cph:Cpha266_2634 transposase, IS4 family protein; transposase IS4 family protein 256552 6354683 Clim_0227 Chlorobium limicola DSM 245 transposase IS4 family protein YP_001942303.1 255185 R 290315 CDS YP_001942304.1 189345775 6354684 256778..258223 1 NC_010803.1 KEGG: smr:Smar_0369 hypothetical protein; hypothetical protein 258223 6354684 Clim_0228 Chlorobium limicola DSM 245 hypothetical protein YP_001942304.1 256778 D 290315 CDS YP_001942305.1 189345776 6354686 complement(259062..259835) 1 NC_010803.1 PFAM: IstB domain protein ATP-binding protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: cph:Cpha266_2659 IstB domain protein ATP-binding protein; IstB domain-containing protein ATP-binding protein 259835 6354686 Clim_0230 Chlorobium limicola DSM 245 IstB domain-containing protein ATP-binding protein YP_001942305.1 259062 R 290315 CDS YP_001942306.1 189345777 6354688 260724..261149 1 NC_010803.1 TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; KEGG: cph:Cpha266_0291 nucleotidyltransferase substrate binding protein, HI0074 family; nucleotidyltransferase substrate binding protein 261149 6354688 Clim_0232 Chlorobium limicola DSM 245 nucleotidyltransferase substrate binding protein YP_001942306.1 260724 D 290315 CDS YP_001942307.1 189345778 6354689 261146..261472 1 NC_010803.1 PFAM: DNA polymerase beta domain protein region; KEGG: cph:Cpha266_0292 DNA polymerase, beta domain protein region; DNA polymerase beta domain-containing protein 261472 6354689 Clim_0233 Chlorobium limicola DSM 245 DNA polymerase beta domain-containing protein YP_001942307.1 261146 D 290315 CDS YP_001942308.1 189345779 6354690 261766..262137 1 NC_010803.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: gme:Gmet_0160 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 262137 6354690 Clim_0234 Chlorobium limicola DSM 245 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001942308.1 261766 D 290315 CDS YP_001942309.1 189345780 6354691 262395..262820 1 NC_010803.1 KEGG: pna:Pnap_4866 hypothetical protein; hypothetical protein 262820 6354691 Clim_0235 Chlorobium limicola DSM 245 hypothetical protein YP_001942309.1 262395 D 290315 CDS YP_001942310.1 189345781 6354692 262989..263324 1 NC_010803.1 SMART: helix-turn-helix domain protein; KEGG: pvi:Cvib_0653 XRE family transcriptional regulator; helix-turn-helix domain-containing protein 263324 6354692 Clim_0236 Chlorobium limicola DSM 245 helix-turn-helix domain-containing protein YP_001942310.1 262989 D 290315 CDS YP_001942311.1 189345782 6354693 263317..264564 1 NC_010803.1 PFAM: HipA domain protein; KEGG: cak:Caul_5344 HipA domain protein; HipA domain-containing protein 264564 6354693 Clim_0237 Chlorobium limicola DSM 245 HipA domain-containing protein YP_001942311.1 263317 D 290315 CDS YP_001942312.1 189345783 6354694 264812..267580 1 NC_010803.1 KEGG: cph:Cpha266_0299 DNA helicase; DNA helicase 267580 6354694 Clim_0238 Chlorobium limicola DSM 245 DNA helicase YP_001942312.1 264812 D 290315 CDS YP_001942313.1 189345784 6354695 267676..267891 1 NC_010803.1 KEGG: cch:Cag_1322 hypothetical protein; hypothetical protein 267891 6354695 Clim_0239 Chlorobium limicola DSM 245 hypothetical protein YP_001942313.1 267676 D 290315 CDS YP_001942314.1 189345785 6354696 267975..269543 1 NC_010803.1 PFAM: transposase IS4 family protein; KEGG: amt:Amet_3130 transposase, IS4 family protein; transposase IS4 family protein 269543 6354696 Clim_0240 Chlorobium limicola DSM 245 transposase IS4 family protein YP_001942314.1 267975 D 290315 CDS YP_001942315.1 189345786 6354697 complement(269707..271248) 1 NC_010803.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 271248 guaA 6354697 guaA Chlorobium limicola DSM 245 GMP synthase YP_001942315.1 269707 R 290315 CDS YP_001942316.1 189345787 6354698 complement(271283..273475) 1 NC_010803.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: cph:Cpha266_0301 penicillin-binding protein, 1A family; penicillin-binding protein 273475 6354698 Clim_0242 Chlorobium limicola DSM 245 penicillin-binding protein YP_001942316.1 271283 R 290315 CDS YP_001942317.1 189345788 6354699 complement(273603..274526) 1 NC_010803.1 PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_0302 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 274526 6354699 Clim_0243 Chlorobium limicola DSM 245 alpha/beta hydrolase fold protein YP_001942317.1 273603 R 290315 CDS YP_001942318.1 189345789 6354700 274644..275357 1 NC_010803.1 PFAM: SNARE associated Golgi protein; KEGG: cph:Cpha266_0303 DedA protein; hypothetical protein 275357 6354700 Clim_0244 Chlorobium limicola DSM 245 hypothetical protein YP_001942318.1 274644 D 290315 CDS YP_001942319.1 189345790 6354702 276001..277476 1 NC_010803.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cph:Cpha266_0305 amine oxidase; amine oxidase 277476 6354702 Clim_0245 Chlorobium limicola DSM 245 amine oxidase YP_001942319.1 276001 D 290315 CDS YP_001942320.1 189345791 6354703 277730..278992 1 NC_010803.1 KEGG: cph:Cpha266_0306 hypothetical protein; hypothetical protein 278992 6354703 Clim_0246 Chlorobium limicola DSM 245 hypothetical protein YP_001942320.1 277730 D 290315 CDS YP_001942321.1 189345792 6354704 278997..279734 1 NC_010803.1 KEGG: cph:Cpha266_0307 hypothetical protein; hypothetical protein 279734 6354704 Clim_0247 Chlorobium limicola DSM 245 hypothetical protein YP_001942321.1 278997 D 290315 CDS YP_001942322.1 189345793 6354705 279789..280511 1 NC_010803.1 KEGG: mmi:MMAR_2580 hypothetical protein; hypothetical protein 280511 6354705 Clim_0248 Chlorobium limicola DSM 245 hypothetical protein YP_001942322.1 279789 D 290315 CDS YP_001942323.1 189345794 6354706 complement(280605..281447) 1 NC_010803.1 PFAM: beta-lactamase domain protein; KEGG: cph:Cpha266_0308 beta-lactamase domain protein; beta-lactamase domain-containing protein 281447 6354706 Clim_0249 Chlorobium limicola DSM 245 beta-lactamase domain-containing protein YP_001942323.1 280605 R 290315 CDS YP_001942324.1 189345795 6354707 complement(281526..282173) 1 NC_010803.1 PFAM: surface antigen msp4 family protein; KEGG: cph:Cpha266_0309 outer surface protein; surface antigen msp4 family protein 282173 6354707 Clim_0250 Chlorobium limicola DSM 245 surface antigen msp4 family protein YP_001942324.1 281526 R 290315 CDS YP_001942325.1 189345796 6354708 282463..283272 1 NC_010803.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: cph:Cpha266_0311 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 283272 6354708 Clim_0251 Chlorobium limicola DSM 245 NAD-dependent epimerase/dehydratase YP_001942325.1 282463 D 290315 CDS YP_001942326.1 189345797 6354709 283303..284655 1 NC_010803.1 TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: cph:Cpha266_0312 cobyrinate a,c-diamide synthase / hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing); cobyrinic acid a,c-diamide synthase 284655 6354709 Clim_0252 Chlorobium limicola DSM 245 cobyrinic acid a,c-diamide synthase YP_001942326.1 283303 D 290315 CDS YP_001942327.1 189345798 6354710 284662..285195 1 NC_010803.1 KEGG: cph:Cpha266_0313 hypothetical protein; hypothetical protein 285195 6354710 Clim_0253 Chlorobium limicola DSM 245 hypothetical protein YP_001942327.1 284662 D 290315 CDS YP_001942328.1 189345799 6354711 complement(285185..285667) 1 NC_010803.1 KEGG: cph:Cpha266_0333 hypothetical protein; hypothetical protein 285667 6354711 Clim_0254 Chlorobium limicola DSM 245 hypothetical protein YP_001942328.1 285185 R 290315 CDS YP_001942329.1 189345800 6354712 285833..288382 1 NC_010803.1 PFAM: UvrB/UvrC protein; ATPase AAA; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: cph:Cpha266_0334 ATPase AAA-2 domain protein; ATPase AAA 288382 6354712 Clim_0255 Chlorobium limicola DSM 245 ATPase AAA YP_001942329.1 285833 D 290315 CDS YP_001942330.1 189345801 6354713 complement(288452..289825) 1 NC_010803.1 catalyzes the formation of L-tryptophan from indole and L-serine; tryptophan synthase subunit beta 289825 6354713 Clim_0256 Chlorobium limicola DSM 245 tryptophan synthase subunit beta YP_001942330.1 288452 R 290315 CDS YP_001942331.1 189345802 6354714 complement(289822..290268) 1 NC_010803.1 hypothetical protein 290268 6354714 Clim_0257 Chlorobium limicola DSM 245 hypothetical protein YP_001942331.1 289822 R 290315 CDS YP_001942332.1 189345803 6353775 complement(290618..291685) 1 NC_010803.1 KEGG: cph:Cpha266_0336 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein; thiamine-monophosphate kinase 291685 6353775 Clim_0258 Chlorobium limicola DSM 245 thiamine-monophosphate kinase YP_001942332.1 290618 R 290315 CDS YP_001942333.1 189345804 6353776 291979..292932 1 NC_010803.1 KEGG: cph:Cpha266_0337 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 292932 6353776 Clim_0259 Chlorobium limicola DSM 245 signal recognition particle-docking protein FtsY YP_001942333.1 291979 D 290315 CDS YP_001942334.1 189345805 6353777 complement(292920..293513) 1 NC_010803.1 KEGG: cph:Cpha266_0338 hypothetical protein; hypothetical protein 293513 6353777 Clim_0260 Chlorobium limicola DSM 245 hypothetical protein YP_001942334.1 292920 R 290315 CDS YP_001942335.1 189345806 6353778 293640..294293 1 NC_010803.1 KEGG: cph:Cpha266_0339 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 294293 6353778 Clim_0261 Chlorobium limicola DSM 245 protein-L-isoaspartate O-methyltransferase YP_001942335.1 293640 D 290315 CDS YP_001942336.1 189345807 6353779 294333..296438 1 NC_010803.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: cph:Cpha266_0340 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 296438 6353779 Clim_0262 Chlorobium limicola DSM 245 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001942336.1 294333 D 290315 CDS YP_001942337.1 189345808 6353780 complement(296463..298265) 1 NC_010803.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: cph:Cpha266_0341 phosphoenolpyruvate--protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase 298265 6353780 Clim_0263 Chlorobium limicola DSM 245 phosphoenolpyruvate-protein phosphotransferase YP_001942337.1 296463 R 290315 CDS YP_001942338.1 189345809 6353781 complement(298275..299798) 1 NC_010803.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: cch:Cag_1608 DnaB helicase; replicative DNA helicase 299798 6353781 Clim_0264 Chlorobium limicola DSM 245 replicative DNA helicase YP_001942338.1 298275 R 290315 CDS YP_001942339.1 189345810 6353782 complement(299813..300448) 1 NC_010803.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: cph:Cpha266_0343 phage SPO1 DNA polymerase-related protein; phage SPO1 DNA polymerase-like protein 300448 6353782 Clim_0265 Chlorobium limicola DSM 245 phage SPO1 DNA polymerase-like protein YP_001942339.1 299813 R 290315 CDS YP_001942340.1 189345811 6353783 complement(300470..301696) 1 NC_010803.1 KEGG: pvi:Cvib_1568 phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 301696 6353783 Clim_0266 Chlorobium limicola DSM 245 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase YP_001942340.1 300470 R 290315 CDS YP_001942341.1 189345812 6353784 complement(301753..306318) 1 NC_010803.1 KEGG: cph:Cpha266_0345 hypothetical protein; hypothetical protein 306318 6353784 Clim_0267 Chlorobium limicola DSM 245 hypothetical protein YP_001942341.1 301753 R 290315 CDS YP_001942342.1 189345813 6353785 complement(306305..306808) 1 NC_010803.1 TIGRFAM: cytidyltransferase-related domain protein; rfaE bifunctional protein; PFAM: cytidylyltransferase; KEGG: cph:Cpha266_0346 RfaE bifunctional protein; rfaE bifunctional protein 306808 6353785 Clim_0268 Chlorobium limicola DSM 245 rfaE bifunctional protein YP_001942342.1 306305 R 290315 CDS YP_001942343.1 189345814 6353786 307004..307276 1 NC_010803.1 KEGG: mmw:Mmwyl1_0817 DNA polymerase, beta domain protein region; DNA polymerase, beta domain-containing protein region 307276 6353786 Clim_0269 Chlorobium limicola DSM 245 DNA polymerase, beta domain-containing protein region YP_001942343.1 307004 D 290315 CDS YP_001942344.1 189345815 6353787 307273..307422 1 NC_010803.1 hypothetical protein 307422 6353787 Clim_0270 Chlorobium limicola DSM 245 hypothetical protein YP_001942344.1 307273 D 290315 CDS YP_001942345.1 189345816 6353788 307440..308363 1 NC_010803.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: pvi:Cvib_0671 lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase 308363 6353788 Clim_0271 Chlorobium limicola DSM 245 lipid A biosynthesis acyltransferase YP_001942345.1 307440 D 290315 CDS YP_001942346.1 189345817 6353789 308490..310394 1 NC_010803.1 PFAM: ABC transporter transmembrane region; ABC transporter; SMART: AAA ATPase; KEGG: pvi:Cvib_0672 ABC transporter; ABC transporter 310394 6353789 Clim_0272 Chlorobium limicola DSM 245 ABC transporter YP_001942346.1 308490 D 290315 CDS YP_001942347.1 189345818 6353790 complement(310396..311148) 1 NC_010803.1 hypothetical protein 311148 6353790 Clim_0273 Chlorobium limicola DSM 245 hypothetical protein YP_001942347.1 310396 R 290315 CDS YP_001942348.1 189345819 6353791 complement(311145..312224) 1 NC_010803.1 KEGG: bcl:ABC1230 hypothetical protein; hypothetical protein 312224 6353791 Clim_0274 Chlorobium limicola DSM 245 hypothetical protein YP_001942348.1 311145 R 290315 CDS YP_001942349.1 189345820 6353793 complement(313262..313435) 1 NC_010803.1 hypothetical protein 313435 6353793 Clim_0276 Chlorobium limicola DSM 245 hypothetical protein YP_001942349.1 313262 R 290315 CDS YP_001942350.1 189345821 6353794 complement(314096..315160) 1 NC_010803.1 PFAM: glycosyl transferase group 1; KEGG: cch:Cag_1477 glycosyl transferase; group 1 glycosyl transferase 315160 6353794 Clim_0277 Chlorobium limicola DSM 245 group 1 glycosyl transferase YP_001942350.1 314096 R 290315 CDS YP_001942351.1 189345822 6353795 complement(315222..316952) 1 NC_010803.1 PFAM: glycosyl transferase family 2; KEGG: nar:Saro_0724 glycosyl transferase, family 2; family 2 glycosyl transferase 316952 6353795 Clim_0278 Chlorobium limicola DSM 245 family 2 glycosyl transferase YP_001942351.1 315222 R 290315 CDS YP_001942352.1 189345823 6353796 complement(316964..318121) 1 NC_010803.1 PFAM: glycosyl transferase group 1; KEGG: mca:MCA2124 colanic acid biosynthesis glycosyl transferase; group 1 glycosyl transferase 318121 6353796 Clim_0279 Chlorobium limicola DSM 245 group 1 glycosyl transferase YP_001942352.1 316964 R 290315 CDS YP_001942353.1 189345824 6353797 complement(318132..319298) 1 NC_010803.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: amr:AM1_4475 aminotransferase, DegT/DnrJ/EryC1/StrS family; DegT/DnrJ/EryC1/StrS aminotransferase 319298 6353797 Clim_0280 Chlorobium limicola DSM 245 DegT/DnrJ/EryC1/StrS aminotransferase YP_001942353.1 318132 R 290315 CDS YP_001942354.1 189345825 6353798 complement(319655..320701) 1 NC_010803.1 PFAM: glycosyl transferase family 9; KEGG: cte:CT0221 heptosyltransferase; glycosyl transferase family protein 320701 6353798 Clim_0281 Chlorobium limicola DSM 245 glycosyl transferase family protein YP_001942354.1 319655 R 290315 CDS YP_001942355.1 189345826 6353799 complement(320698..321792) 1 NC_010803.1 PFAM: glycosyl transferase group 1; KEGG: cte:CT0224 glycosyl transferase; group 1 glycosyl transferase 321792 6353799 Clim_0282 Chlorobium limicola DSM 245 group 1 glycosyl transferase YP_001942355.1 320698 R 290315 CDS YP_001942356.1 189345827 6353800 complement(321789..322871) 1 NC_010803.1 PFAM: glycosyl transferase group 1; KEGG: cch:Cag_1475 glycosyl transferase; group 1 glycosyl transferase 322871 6353800 Clim_0283 Chlorobium limicola DSM 245 group 1 glycosyl transferase YP_001942356.1 321789 R 290315 CDS YP_001942357.1 189345828 6353801 323106..323684 1 NC_010803.1 KEGG: pvi:Cvib_0691 hypothetical protein; hypothetical protein 323684 6353801 Clim_0284 Chlorobium limicola DSM 245 hypothetical protein YP_001942357.1 323106 D 290315 CDS YP_001942358.1 189345829 6353802 complement(323713..324882) 1 NC_010803.1 PFAM: glycosyl transferase group 1; KEGG: cch:Cag_1473 hypothetical protein; group 1 glycosyl transferase 324882 6353802 Clim_0285 Chlorobium limicola DSM 245 group 1 glycosyl transferase YP_001942358.1 323713 R 290315 CDS YP_001942359.1 189345830 6353803 complement(324936..326090) 1 NC_010803.1 PFAM: glycosyl transferase group 1; KEGG: cph:Cpha266_0357 glycosyl transferase, group 1; group 1 glycosyl transferase 326090 6353803 Clim_0286 Chlorobium limicola DSM 245 group 1 glycosyl transferase YP_001942359.1 324936 R 290315 CDS YP_001942360.1 189345831 6353804 complement(326081..326443) 1 NC_010803.1 hypothetical protein 326443 6353804 Clim_0287 Chlorobium limicola DSM 245 hypothetical protein YP_001942360.1 326081 R 290315 CDS YP_001942361.1 189345832 6353805 complement(326477..326719) 1 NC_010803.1 hypothetical protein 326719 6353805 Clim_0288 Chlorobium limicola DSM 245 hypothetical protein YP_001942361.1 326477 R 290315 CDS YP_001942362.1 189345833 6353806 complement(326852..327988) 1 NC_010803.1 PFAM: glycosyl transferase group 1; KEGG: cph:Cpha266_0358 glycosyl transferase, group 1; group 1 glycosyl transferase 327988 6353806 Clim_0289 Chlorobium limicola DSM 245 group 1 glycosyl transferase YP_001942362.1 326852 R 290315 CDS YP_001942363.1 189345834 6353807 complement(328005..328244) 1 NC_010803.1 hypothetical protein 328244 6353807 Clim_0290 Chlorobium limicola DSM 245 hypothetical protein YP_001942363.1 328005 R 290315 CDS YP_001942364.1 189345835 6353808 complement(328282..329364) 1 NC_010803.1 PFAM: glycosyl transferase group 1; KEGG: cch:Cag_1472 glycosyl transferase; group 1 glycosyl transferase 329364 6353808 Clim_0291 Chlorobium limicola DSM 245 group 1 glycosyl transferase YP_001942364.1 328282 R 290315 CDS YP_001942365.1 189345836 6353809 329509..330441 1 NC_010803.1 PFAM: Abortive infection protein; KEGG: cph:Cpha266_0361 abortive infection protein; abortive infection protein 330441 6353809 Clim_0292 Chlorobium limicola DSM 245 abortive infection protein YP_001942365.1 329509 D 290315 CDS YP_001942366.1 189345837 6353810 330472..331293 1 NC_010803.1 PFAM: phosphatidate cytidylyltransferase; KEGG: cph:Cpha266_0362 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 331293 6353810 Clim_0293 Chlorobium limicola DSM 245 phosphatidate cytidylyltransferase YP_001942366.1 330472 D 290315 CDS YP_001942367.1 189345838 6353811 331423..331893 1 NC_010803.1 TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: cph:Cpha266_0363 PTS IIA-like nitrogen-regulatory protein PtsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 331893 6353811 Clim_0294 Chlorobium limicola DSM 245 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_001942367.1 331423 D 290315 CDS YP_001942368.1 189345839 6353812 331922..333214 1 NC_010803.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 333214 hisS 6353812 hisS Chlorobium limicola DSM 245 histidyl-tRNA synthetase YP_001942368.1 331922 D 290315 CDS YP_001942369.1 189345840 6353813 333211..333465 1 NC_010803.1 PFAM: glutaredoxin 2; KEGG: cph:Cpha266_0365 glutaredoxin 2; glutaredoxin 333465 6353813 Clim_0296 Chlorobium limicola DSM 245 glutaredoxin YP_001942369.1 333211 D 290315 CDS YP_001942370.1 189345841 6353814 333513..333725 1 NC_010803.1 KEGG: cch:Cag_1465 hypothetical protein; hypothetical protein 333725 6353814 Clim_0297 Chlorobium limicola DSM 245 hypothetical protein YP_001942370.1 333513 D 290315 CDS YP_001942371.1 189345842 6353815 333846..334376 1 NC_010803.1 PFAM: protein of unknown function DUF150; KEGG: cph:Cpha266_0367 protein of unknown function DUF150; hypothetical protein 334376 6353815 Clim_0298 Chlorobium limicola DSM 245 hypothetical protein YP_001942371.1 333846 D 290315 CDS YP_001942372.1 189345843 6353816 334432..335973 1 NC_010803.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 335973 nusA 6353816 nusA Chlorobium limicola DSM 245 transcription elongation factor NusA YP_001942372.1 334432 D 290315 CDS YP_001942373.1 189345844 6353817 336040..338898 1 NC_010803.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 338898 infB 6353817 infB Chlorobium limicola DSM 245 translation initiation factor IF-2 YP_001942373.1 336040 D 290315 CDS YP_001942374.1 189345845 6353818 338914..339273 1 NC_010803.1 PFAM: ribosome-binding factor A; KEGG: plt:Plut_1778 ribosome-binding factor A; ribosome-binding factor A 339273 6353818 Clim_0301 Chlorobium limicola DSM 245 ribosome-binding factor A YP_001942374.1 338914 D 290315 CDS YP_001942375.1 189345846 6353819 339300..340031 1 NC_010803.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: cch:Cag_1460 tRNA pseudouridine synthase B; tRNA pseudouridine synthase B 340031 6353819 Clim_0302 Chlorobium limicola DSM 245 tRNA pseudouridine synthase B YP_001942375.1 339300 D 290315 CDS YP_001942376.1 189345847 6353820 340039..341004 1 NC_010803.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: cph:Cpha266_0372 riboflavin kinase / FMN adenylyltransferase; riboflavin biosynthesis protein RibF 341004 6353820 Clim_0303 Chlorobium limicola DSM 245 riboflavin biosynthesis protein RibF YP_001942376.1 340039 D 290315 CDS YP_001942377.1 189345848 6353821 341050..341319 1 NC_010803.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 341319 rpsO 6353821 rpsO Chlorobium limicola DSM 245 30S ribosomal protein S15 YP_001942377.1 341050 D 290315 CDS YP_001942378.1 189345849 6353822 341412..342299 1 NC_010803.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: cph:Cpha266_0374 hypothetical protein; hypothetical protein 342299 6353822 Clim_0305 Chlorobium limicola DSM 245 hypothetical protein YP_001942378.1 341412 D 290315 CDS YP_001942379.1 189345850 6353823 342307..342885 1 NC_010803.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 342885 gmk 6353823 gmk Chlorobium limicola DSM 245 guanylate kinase YP_001942379.1 342307 D 290315 CDS YP_001942380.1 189345851 6353824 342897..343250 1 NC_010803.1 KEGG: pvi:Cvib_1554 hypothetical protein; hypothetical protein 343250 6353824 Clim_0307 Chlorobium limicola DSM 245 hypothetical protein YP_001942380.1 342897 D 290315 CDS YP_001942381.1 189345852 6353825 343222..343725 1 NC_010803.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cte:CT0249 glutathione S-transferase, fosfomycin resistance protein; Glyoxalase/bleomycin resistance protein/dioxygenase 343725 6353825 Clim_0308 Chlorobium limicola DSM 245 Glyoxalase/bleomycin resistance protein/dioxygenase YP_001942381.1 343222 D 290315 CDS YP_001942382.1 189345853 6353826 complement(343748..344482) 1 NC_010803.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; Nucleotidyl transferase; KEGG: cph:Cpha266_0378 UDP-N-acetylglucosamine pyrophosphorylase; nucleotidyl transferase 344482 6353826 Clim_0309 Chlorobium limicola DSM 245 nucleotidyl transferase YP_001942382.1 343748 R 290315 CDS YP_001942383.1 189345854 6353827 complement(344511..344897) 1 NC_010803.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 344897 6353827 Clim_0310 Chlorobium limicola DSM 245 aspartate alpha-decarboxylase YP_001942383.1 344511 R 290315 CDS YP_001942384.1 189345855 6353828 complement(344916..345359) 1 NC_010803.1 PFAM: protein of unknown function DUF1239; KEGG: cph:Cpha266_0380 hypothetical protein; hypothetical protein 345359 6353828 Clim_0311 Chlorobium limicola DSM 245 hypothetical protein YP_001942384.1 344916 R 290315 CDS YP_001942385.1 189345856 6353829 complement(345482..346039) 1 NC_010803.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: pvi:Cvib_1549 outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp 346039 6353829 Clim_0312 Chlorobium limicola DSM 245 outer membrane chaperone Skp YP_001942385.1 345482 R 290315 CDS YP_001942386.1 189345857 6353830 complement(346184..346933) 1 NC_010803.1 KEGG: cte:CT0222 hypothetical protein; hypothetical protein 346933 6353830 Clim_0313 Chlorobium limicola DSM 245 hypothetical protein YP_001942386.1 346184 R 290315 CDS YP_001942387.1 189345858 6353831 complement(346905..348083) 1 NC_010803.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: cph:Cpha266_0383 DNA protecting protein DprA; DNA protecting protein DprA 348083 6353831 Clim_0314 Chlorobium limicola DSM 245 DNA protecting protein DprA YP_001942387.1 346905 R 290315 CDS YP_001942388.1 189345859 6353832 complement(348094..349092) 1 NC_010803.1 PFAM: Polyprenyl synthetase; KEGG: cph:Cpha266_0384 polyprenyl synthetase; polyprenyl synthetase 349092 6353832 Clim_0315 Chlorobium limicola DSM 245 polyprenyl synthetase YP_001942388.1 348094 R 290315 CDS YP_001942389.1 189345860 6353833 complement(349092..350174) 1 NC_010803.1 catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase 350174 6353833 Clim_0316 Chlorobium limicola DSM 245 isopentenyl pyrophosphate isomerase YP_001942389.1 349092 R 290315 CDS YP_001942390.1 189345861 6353834 350276..351544 1 NC_010803.1 PFAM: protein of unknown function DUF214; KEGG: cph:Cpha266_0386 protein of unknown function DUF214; hypothetical protein 351544 6353834 Clim_0317 Chlorobium limicola DSM 245 hypothetical protein YP_001942390.1 350276 D 290315 CDS YP_001942391.1 189345862 6353835 complement(351657..353468) 1 NC_010803.1 PFAM: ABC transporter transmembrane region; ABC transporter; SMART: AAA ATPase; KEGG: cph:Cpha266_0387 ABC transporter; ABC transporter 353468 6353835 Clim_0318 Chlorobium limicola DSM 245 ABC transporter YP_001942391.1 351657 R 290315 CDS YP_001942392.1 189345863 6353836 complement(353511..354989) 1 NC_010803.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: cph:Cpha266_0388 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 354989 6353836 Clim_0319 Chlorobium limicola DSM 245 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I YP_001942392.1 353511 R 290315 CDS YP_001942393.1 189345864 6353837 355152..355427 1 NC_010803.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 355427 rpsT 6353837 rpsT Chlorobium limicola DSM 245 30S ribosomal protein S20 YP_001942393.1 355152 D 290315 CDS YP_001942394.1 189345865 6353838 355545..356156 1 NC_010803.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 356156 ruvA 6353838 ruvA Chlorobium limicola DSM 245 Holliday junction DNA helicase RuvA YP_001942394.1 355545 D 290315 CDS YP_001942395.1 189345866 6353839 356220..357455 1 NC_010803.1 TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; KEGG: cph:Cpha266_0391 FolC bifunctional protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 357455 6353839 Clim_0322 Chlorobium limicola DSM 245 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_001942395.1 356220 D 290315 CDS YP_001942396.1 189345867 6353840 357766..359055 1 NC_010803.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 359055 rho 6353840 rho Chlorobium limicola DSM 245 transcription termination factor Rho YP_001942396.1 357766 D 290315 CDS YP_001942397.1 189345868 6353844 360483..361298 1 NC_010803.1 PFAM: Methyltransferase type 11; KEGG: pla:Plav_2493 methyltransferase type 11; type 11 methyltransferase 361298 6353844 Clim_0325 Chlorobium limicola DSM 245 type 11 methyltransferase YP_001942397.1 360483 D 290315 CDS YP_001942398.1 189345869 6353845 361305..362069 1 NC_010803.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: pvi:Cvib_1536 electron transfer flavoprotein beta-subunit; Electron transfer flavoprotein subunit alpha/beta 362069 6353845 Clim_0326 Chlorobium limicola DSM 245 Electron transfer flavoprotein subunit alpha/beta YP_001942398.1 361305 D 290315 CDS YP_001942399.1 189345870 6353846 362074..363045 1 NC_010803.1 PFAM: Electron transfer flavoprotein alpha subunit; KEGG: pvi:Cvib_1535 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 363045 6353846 Clim_0327 Chlorobium limicola DSM 245 electron transfer flavoprotein subunit alpha YP_001942399.1 362074 D 290315 CDS YP_001942400.1 189345871 6353847 363118..363720 1 NC_010803.1 PFAM: UvrB/UvrC protein; protein of unknown function DUF151; KEGG: cph:Cpha266_0395 protein of unknown function DUF151; hypothetical protein 363720 6353847 Clim_0328 Chlorobium limicola DSM 245 hypothetical protein YP_001942400.1 363118 D 290315 CDS YP_001942401.1 189345872 6353848 complement(364070..364738) 1 NC_010803.1 PFAM: surface antigen msp4 family protein; KEGG: cph:Cpha266_0396 hypothetical protein; surface antigen msp4 family protein 364738 6353848 Clim_0329 Chlorobium limicola DSM 245 surface antigen msp4 family protein YP_001942401.1 364070 R 290315 CDS YP_001942402.1 189345873 6353849 complement(364908..367403) 1 NC_010803.1 TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: cph:Cpha266_0397 surface antigen (D15); outer membrane protein assembly complex, YaeT protein 367403 6353849 Clim_0330 Chlorobium limicola DSM 245 outer membrane protein assembly complex, YaeT protein YP_001942402.1 364908 R 290315 CDS YP_001942403.1 189345874 6353850 complement(367427..368257) 1 NC_010803.1 KEGG: cph:Cpha266_0398 undecaprenyl pyrophosphate synthetase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 368257 6353850 Clim_0331 Chlorobium limicola DSM 245 undecaprenyl diphosphate synthase YP_001942403.1 367427 R 290315 CDS YP_001942404.1 189345875 6353851 368522..369946 1 NC_010803.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 369946 gatA 6353851 gatA Chlorobium limicola DSM 245 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_001942404.1 368522 D 290315 CDS YP_001942405.1 189345876 6353852 369992..370891 1 NC_010803.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: plt:Plut_1748 succinyl-CoA ligase, alpha subunit; succinyl-CoA synthetase subunit alpha 370891 6353852 Clim_0333 Chlorobium limicola DSM 245 succinyl-CoA synthetase subunit alpha YP_001942405.1 369992 D 290315 CDS YP_001942406.1 189345877 6353853 complement(370967..371947) 1 NC_010803.1 KEGG: cph:Cpha266_0401 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KpsF/GutQ family protein 371947 6353853 Clim_0334 Chlorobium limicola DSM 245 KpsF/GutQ family protein YP_001942406.1 370967 R 290315 CDS YP_001942407.1 189345878 6353854 372071..372427 1 NC_010803.1 KEGG: cph:Cpha266_0402 hypothetical protein; hypothetical protein 372427 6353854 Clim_0335 Chlorobium limicola DSM 245 hypothetical protein YP_001942407.1 372071 D 290315 CDS YP_001942408.1 189345879 6354260 372442..373956 1 NC_010803.1 PFAM: polysaccharide biosynthesis protein; KEGG: cph:Cpha266_0403 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 373956 6354260 Clim_0336 Chlorobium limicola DSM 245 polysaccharide biosynthesis protein YP_001942408.1 372442 D 290315 CDS YP_001942409.1 189345880 6354331 complement(374130..374669) 1 NC_010803.1 KEGG: plt:Plut_1743 hypothetical protein; hypothetical protein 374669 6354331 Clim_0337 Chlorobium limicola DSM 245 hypothetical protein YP_001942409.1 374130 R 290315 CDS YP_001942410.1 189345881 6354332 complement(374808..375377) 1 NC_010803.1 KEGG: cph:Cpha266_0405 hypothetical protein; hypothetical protein 375377 6354332 Clim_0338 Chlorobium limicola DSM 245 hypothetical protein YP_001942410.1 374808 R 290315 CDS YP_001942411.1 189345882 6354333 complement(375451..375852) 1 NC_010803.1 KEGG: cph:Cpha266_0407 hypothetical protein; hypothetical protein 375852 6354333 Clim_0339 Chlorobium limicola DSM 245 hypothetical protein YP_001942411.1 375451 R 290315 CDS YP_001942412.1 189345883 6354334 complement(375931..376539) 1 NC_010803.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pvi:Cvib_1522 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 376539 6354334 Clim_0340 Chlorobium limicola DSM 245 ECF subfamily RNA polymerase sigma-24 subunit YP_001942412.1 375931 R 290315 CDS YP_001942413.1 189345884 6354335 complement(376714..378096) 1 NC_010803.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: cph:Cpha266_0410 phosphomannomutase; Phosphoglucomutase 378096 6354335 Clim_0341 Chlorobium limicola DSM 245 Phosphoglucomutase YP_001942413.1 376714 R 290315 CDS YP_001942414.1 189345885 6354336 378204..379346 1 NC_010803.1 KEGG: cph:Cpha266_0411 lipid-A-disaccharide synthase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19; lipid-A-disaccharide synthase 379346 6354336 Clim_0342 Chlorobium limicola DSM 245 lipid-A-disaccharide synthase YP_001942414.1 378204 D 290315 CDS YP_001942415.1 189345886 6354337 379354..379629 1 NC_010803.1 KEGG: cph:Cpha266_0412 hypothetical protein; hypothetical protein 379629 6354337 Clim_0343 Chlorobium limicola DSM 245 hypothetical protein YP_001942415.1 379354 D 290315 CDS YP_001942416.1 189345887 6354338 complement(379647..381623) 1 NC_010803.1 these proteins belong to a family of oxidoreductases related to the NADPH-dependent glutamate synthase; NADPH-dependent glutamate synthase small subunit 381623 6354338 Clim_0344 Chlorobium limicola DSM 245 NADPH-dependent glutamate synthase small subunit YP_001942416.1 379647 R 290315 CDS YP_001942417.1 189345888 6354339 complement(381651..382625) 1 NC_010803.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 382625 ispH 6354339 ispH Chlorobium limicola DSM 245 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_001942417.1 381651 R 290315 CDS YP_001942418.1 189345889 6354340 complement(382712..383536) 1 NC_010803.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 383536 6354340 Clim_0346 Chlorobium limicola DSM 245 glutamate racemase YP_001942418.1 382712 R 290315 CDS YP_001942419.1 189345890 6354341 complement(383554..384645) 1 NC_010803.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 384645 6354341 Clim_0347 Chlorobium limicola DSM 245 GTP-dependent nucleic acid-binding protein EngD YP_001942419.1 383554 R 290315 CDS YP_001942420.1 189345891 6354342 384764..385477 1 NC_010803.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 385477 cmk 6354342 cmk Chlorobium limicola DSM 245 cytidylate kinase YP_001942420.1 384764 D 290315 CDS YP_001942421.1 189345892 6354343 385593..387353 1 NC_010803.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 387353 rpsA 6354343 rpsA Chlorobium limicola DSM 245 30S ribosomal protein S1 YP_001942421.1 385593 D 290315 CDS YP_001942422.1 189345893 6354344 complement(387462..388379) 1 NC_010803.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 388379 era 6354344 era Chlorobium limicola DSM 245 GTP-binding protein Era YP_001942422.1 387462 R 290315 CDS YP_001942423.1 189345894 6354345 388480..389703 1 NC_010803.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: cph:Cpha266_0420 cell cycle protein; rod shape-determining protein RodA 389703 6354345 Clim_0351 Chlorobium limicola DSM 245 rod shape-determining protein RodA YP_001942423.1 388480 D 290315 CDS YP_001942424.1 189345895 6354346 389931..391307 1 NC_010803.1 KEGG: cph:Cpha266_0422 RNA modification enzyme, MiaB family; TIGRFAM: RNA modification enzyme, MiaB family; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; MiaB family RNA modification protein 391307 6354346 Clim_0352 Chlorobium limicola DSM 245 MiaB family RNA modification protein YP_001942424.1 389931 D 290315 CDS YP_001942425.1 189345896 6354347 391368..391901 1 NC_010803.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 391901 6354347 Clim_0353 Chlorobium limicola DSM 245 adenine phosphoribosyltransferase YP_001942425.1 391368 D 290315 CDS YP_001942426.1 189345897 6354348 391909..393369 1 NC_010803.1 KEGG: plt:Plut_1726 hypothetical protein; hypothetical protein 393369 6354348 Clim_0354 Chlorobium limicola DSM 245 hypothetical protein YP_001942426.1 391909 D 290315 CDS YP_001942427.1 189345898 6354349 393381..393767 1 NC_010803.1 KEGG: pvi:Cvib_1507 hypothetical protein; hypothetical protein 393767 6354349 Clim_0355 Chlorobium limicola DSM 245 hypothetical protein YP_001942427.1 393381 D 290315 CDS YP_001942428.1 189345899 6354350 complement(393800..394108) 1 NC_010803.1 PFAM: histone family protein DNA-binding protein; KEGG: cph:Cpha266_0424 histone family protein DNA-binding protein; histone family protein DNA-binding protein 394108 6354350 Clim_0356 Chlorobium limicola DSM 245 histone family protein DNA-binding protein YP_001942428.1 393800 R 290315 CDS YP_001942429.1 189345900 6354351 complement(394145..394510) 1 NC_010803.1 KEGG: cph:Cpha266_0425 hypothetical protein; hypothetical protein 394510 6354351 Clim_0357 Chlorobium limicola DSM 245 hypothetical protein YP_001942429.1 394145 R 290315 CDS YP_001942430.1 189345901 6354352 complement(394554..396512) 1 NC_010803.1 KEGG: cph:Cpha266_0426 FtsH peptidase. Metallo peptidase. MEROPS family M41; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA; peptidase M41 FtsH extracellular; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 396512 6354352 Clim_0358 Chlorobium limicola DSM 245 ATP-dependent metalloprotease FtsH YP_001942430.1 394554 R 290315 CDS YP_001942431.1 189345902 6354353 396778..398286 1 NC_010803.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 398286 gltX 6354353 gltX Chlorobium limicola DSM 245 glutamyl-tRNA synthetase YP_001942431.1 396778 D 290315 CDS YP_001942432.1 189345903 6354355 398591..399721 1 NC_010803.1 PFAM: hydroxyneurosporene synthase; KEGG: cph:Cpha266_0428 hydroxyneurosporene synthase; hydroxyneurosporene synthase 399721 6354355 Clim_0360 Chlorobium limicola DSM 245 hydroxyneurosporene synthase YP_001942432.1 398591 D 290315 CDS YP_001942433.1 189345904 6354356 399875..400420 1 NC_010803.1 PFAM: Rieske [2Fe-2S] domain protein; Cytochrome b6-f complex Fe-S subunit; KEGG: cph:Cpha266_0429 Plastoquinol--plastocyanin reductase; Plastoquinol--plastocyanin reductase 400420 6354356 Clim_0361 Chlorobium limicola DSM 245 Plastoquinol--plastocyanin reductase YP_001942433.1 399875 D 290315 CDS YP_001942434.1 189345905 6354357 400457..401746 1 NC_010803.1 PFAM: Cytochrome b/b6 domain; KEGG: plt:Plut_1718 cytochrome b-c complex, cytochrome b subunit; Cytochrome b/b6 domain 401746 6354357 Clim_0362 Chlorobium limicola DSM 245 Cytochrome b/b6 domain YP_001942434.1 400457 D 290315 CDS YP_001942435.1 189345906 6354358 complement(401836..405354) 1 NC_010803.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cph:Cpha266_0431 alpha amylase, catalytic region; alpha amylase 405354 6354358 Clim_0363 Chlorobium limicola DSM 245 alpha amylase YP_001942435.1 401836 R 290315 CDS YP_001942436.1 189345907 6354359 405364..405540 1 NC_010803.1 hypothetical protein 405540 6354359 Clim_0364 Chlorobium limicola DSM 245 hypothetical protein YP_001942436.1 405364 D 290315 CDS YP_001942437.1 189345908 6354360 complement(405710..406096) 1 NC_010803.1 KEGG: cph:Cpha266_0432 hypothetical protein; hypothetical protein 406096 6354360 Clim_0365 Chlorobium limicola DSM 245 hypothetical protein YP_001942437.1 405710 R 290315 CDS YP_001942438.1 189345909 6354361 complement(406083..406478) 1 NC_010803.1 KEGG: cph:Cpha266_0433 hypothetical protein; hypothetical protein 406478 6354361 Clim_0366 Chlorobium limicola DSM 245 hypothetical protein YP_001942438.1 406083 R 290315 CDS YP_001942439.1 189345910 6354362 complement(406508..406777) 1 NC_010803.1 KEGG: cph:Cpha266_0434 hypothetical protein; hypothetical protein 406777 6354362 Clim_0367 Chlorobium limicola DSM 245 hypothetical protein YP_001942439.1 406508 R 290315 CDS YP_001942440.1 189345911 6354363 complement(406835..407542) 1 NC_010803.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cte:CT1766 3-oxoacyl-(acyl-carrier-protein) reductase; short-chain dehydrogenase/reductase SDR 407542 6354363 Clim_0368 Chlorobium limicola DSM 245 short-chain dehydrogenase/reductase SDR YP_001942440.1 406835 R 290315 CDS YP_001942441.1 189345912 6354364 complement(407679..408467) 1 NC_010803.1 PFAM: protein of unknown function DUF81; KEGG: cte:CT1829 hypothetical protein; hypothetical protein 408467 6354364 Clim_0369 Chlorobium limicola DSM 245 hypothetical protein YP_001942441.1 407679 R 290315 CDS YP_001942442.1 189345913 6354365 complement(408472..408597) 1 NC_010803.1 hypothetical protein 408597 6354365 Clim_0370 Chlorobium limicola DSM 245 hypothetical protein YP_001942442.1 408472 R 290315 CDS YP_001942443.1 189345914 6354366 complement(408774..409682) 1 NC_010803.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: cph:Cpha266_0438 ABC transporter; ABC transporter 409682 6354366 Clim_0371 Chlorobium limicola DSM 245 ABC transporter YP_001942443.1 408774 R 290315 CDS YP_001942444.1 189345915 6354367 complement(409679..410347) 1 NC_010803.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sun:SUN_2103 molybdenum ABC transporter, permease; molybdate ABC transporter inner membrane subunit 410347 6354367 Clim_0372 Chlorobium limicola DSM 245 molybdate ABC transporter inner membrane subunit YP_001942444.1 409679 R 290315 CDS YP_001942445.1 189345916 6354368 complement(410337..410738) 1 NC_010803.1 PFAM: TOBE domain protein; KEGG: cph:Cpha266_0439 TOBE domain protein; TOBE domain-containing protein 410738 6354368 Clim_0373 Chlorobium limicola DSM 245 TOBE domain-containing protein YP_001942445.1 410337 R 290315 CDS YP_001942446.1 189345917 6354369 complement(410731..411525) 1 NC_010803.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mca:MCA1378 molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 411525 6354369 Clim_0374 Chlorobium limicola DSM 245 molybdenum ABC transporter periplasmic molybdate-binding protein YP_001942446.1 410731 R 290315 CDS YP_001942447.1 189345918 6354370 complement(411530..412375) 1 NC_010803.1 TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase; KEGG: cph:Cpha266_0455 ModD protein; modD protein 412375 6354370 Clim_0375 Chlorobium limicola DSM 245 modD protein YP_001942447.1 411530 R 290315 CDS YP_001942448.1 189345919 6354371 413547..414575 1 NC_010803.1 KEGG: cch:Cag_0501 periplasmic phosphate binding protein; phosphate binding protein 414575 6354371 Clim_0376 Chlorobium limicola DSM 245 phosphate binding protein YP_001942448.1 413547 D 290315 CDS YP_001942449.1 189345920 6354372 414690..415931 1 NC_010803.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cch:Cag_0500 phosphate ABC transporter, permease protein PstC; phosphate ABC transporter permease 415931 6354372 Clim_0377 Chlorobium limicola DSM 245 phosphate ABC transporter permease YP_001942449.1 414690 D 290315 CDS YP_001942450.1 189345921 6354373 415951..417114 1 NC_010803.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cch:Cag_0499 phosphate transport system permease protein 2; phosphate ABC transporter permease 417114 6354373 Clim_0378 Chlorobium limicola DSM 245 phosphate ABC transporter permease YP_001942450.1 415951 D 290315 CDS YP_001942451.1 189345922 6354374 417148..417912 1 NC_010803.1 KEGG: cch:Cag_0498 phosphate transport system permease protein 1; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter; SMART: AAA ATPase; phosphate ABC transporter ATPase 417912 6354374 Clim_0379 Chlorobium limicola DSM 245 phosphate ABC transporter ATPase YP_001942451.1 417148 D 290315 CDS YP_001942452.1 189345923 6354375 417956..418654 1 NC_010803.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: cch:Cag_0974 PhoU; phosphate uptake regulator PhoU 418654 6354375 Clim_0380 Chlorobium limicola DSM 245 phosphate uptake regulator PhoU YP_001942452.1 417956 D 290315 CDS YP_001942453.1 189345924 6354376 418702..419136 1 NC_010803.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: plt:Plut_0062 protein tyrosine phosphatase; protein tyrosine phosphatase 419136 6354376 Clim_0381 Chlorobium limicola DSM 245 protein tyrosine phosphatase YP_001942453.1 418702 D 290315 CDS YP_001942454.1 189345925 6354377 complement(419254..421818) 1 NC_010803.1 TIGRFAM: arsenite oxidase, large subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: ttj:TTHB127 arsenite oxidase, large subunit; arsenite oxidase, large subunit 421818 6354377 Clim_0382 Chlorobium limicola DSM 245 arsenite oxidase, large subunit YP_001942454.1 419254 R 290315 CDS YP_001942455.1 189345926 6354378 complement(421831..422322) 1 NC_010803.1 TIGRFAM: arsenite oxidase, small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: ttj:TTHB128 arsenite oxidase, small subunit; arsenite oxidase, small subunit 422322 6354378 Clim_0383 Chlorobium limicola DSM 245 arsenite oxidase, small subunit YP_001942455.1 421831 R 290315 CDS YP_001942456.1 189345927 6354379 complement(422609..423169) 1 NC_010803.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 423169 frr 6354379 frr Chlorobium limicola DSM 245 ribosome recycling factor YP_001942456.1 422609 R 290315 CDS YP_001942457.1 189345928 6354380 complement(423217..423444) 1 NC_010803.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 423444 rpmE 6354380 rpmE Chlorobium limicola DSM 245 50S ribosomal protein L31 YP_001942457.1 423217 R 290315 CDS YP_001942458.1 189345929 6354381 423547..425667 1 NC_010803.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 425667 6354381 Clim_0386 Chlorobium limicola DSM 245 ATP-dependent DNA helicase RecG YP_001942458.1 423547 D 290315 CDS YP_001942459.1 189345930 6354382 425704..426660 1 NC_010803.1 TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: pvi:Cvib_0411 ribosome small subunit-dependent GTPase A; ribosome small subunit-dependent GTPase A 426660 6354382 Clim_0387 Chlorobium limicola DSM 245 ribosome small subunit-dependent GTPase A YP_001942459.1 425704 D 290315 CDS YP_001942460.1 189345931 6354383 426706..428082 1 NC_010803.1 PFAM: Aldehyde Dehydrogenase_; KEGG: cph:Cpha266_2070 aldehyde dehydrogenase; aldehyde dehydrogenase 428082 6354383 Clim_0388 Chlorobium limicola DSM 245 aldehyde dehydrogenase YP_001942460.1 426706 D 290315 CDS YP_001942461.1 189345932 6354384 complement(428162..429376) 1 NC_010803.1 KEGG: plt:Plut_0353 hypothetical protein; hypothetical protein 429376 6354384 Clim_0389 Chlorobium limicola DSM 245 hypothetical protein YP_001942461.1 428162 R 290315 CDS YP_001942462.1 189345933 6354385 complement(429504..430706) 1 NC_010803.1 KEGG: cte:CT1571 hypothetical protein; hypothetical protein 430706 6354385 Clim_0390 Chlorobium limicola DSM 245 hypothetical protein YP_001942462.1 429504 R 290315 CDS YP_001942463.1 189345934 6354386 430864..431412 1 NC_010803.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: cph:Cpha266_2040 protein tyrosine phosphatase; protein tyrosine phosphatase 431412 6354386 Clim_0391 Chlorobium limicola DSM 245 protein tyrosine phosphatase YP_001942463.1 430864 D 290315 CDS YP_001942464.1 189345935 6354387 431412..432314 1 NC_010803.1 PFAM: diacylglycerol kinase catalytic region; KEGG: cph:Cpha266_2039 diacylglycerol kinase, catalytic region; diacylglycerol kinase catalytic subunit 432314 6354387 Clim_0392 Chlorobium limicola DSM 245 diacylglycerol kinase catalytic subunit YP_001942464.1 431412 D 290315 CDS YP_001942465.1 189345936 6354388 432350..433606 1 NC_010803.1 KEGG: cph:Cpha266_2038 hypothetical protein; hypothetical protein 433606 6354388 Clim_0393 Chlorobium limicola DSM 245 hypothetical protein YP_001942465.1 432350 D 290315 CDS YP_001942466.1 189345937 6354389 433626..434192 1 NC_010803.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 434192 6354389 Clim_0394 Chlorobium limicola DSM 245 anthranilate synthase component II YP_001942466.1 433626 D 290315 CDS YP_001942467.1 189345938 6354390 434192..434929 1 NC_010803.1 PFAM: conserved hypothetical protein; KEGG: plt:Plut_0357 hypothetical protein; hypothetical protein 434929 6354390 Clim_0395 Chlorobium limicola DSM 245 hypothetical protein YP_001942467.1 434192 D 290315 CDS YP_001942468.1 189345939 6354391 complement(434889..435377) 1 NC_010803.1 KEGG: pvi:Cvib_0417 hypothetical protein; hypothetical protein 435377 6354391 Clim_0396 Chlorobium limicola DSM 245 hypothetical protein YP_001942468.1 434889 R 290315 CDS YP_001942469.1 189345940 6354392 435433..435765 1 NC_010803.1 KEGG: cph:Cpha266_2036 Fis family transcriptional regulator; Fis family transcriptional regulator 435765 6354392 Clim_0397 Chlorobium limicola DSM 245 Fis family transcriptional regulator YP_001942469.1 435433 D 290315 CDS YP_001942470.1 189345941 6354393 435776..437008 1 NC_010803.1 KEGG: cph:Cpha266_1807 hypothetical protein; hypothetical protein 437008 6354393 Clim_0398 Chlorobium limicola DSM 245 hypothetical protein YP_001942470.1 435776 D 290315 CDS YP_001942471.1 189345942 6354394 437005..437805 1 NC_010803.1 PFAM: cytochrome c assembly protein; KEGG: cte:CT1559 cytochrome c biogenesis protein; cytochrome c assembly protein 437805 6354394 Clim_0399 Chlorobium limicola DSM 245 cytochrome c assembly protein YP_001942471.1 437005 D 290315 CDS YP_001942472.1 189345943 6354395 complement(437821..439512) 1 NC_010803.1 KEGG: cph:Cpha266_2035 hypothetical protein; hypothetical protein 439512 6354395 Clim_0400 Chlorobium limicola DSM 245 hypothetical protein YP_001942472.1 437821 R 290315 CDS YP_001942473.1 189345944 6354396 complement(439517..440293) 1 NC_010803.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 440293 6354396 Clim_0401 Chlorobium limicola DSM 245 stationary phase survival protein SurE YP_001942473.1 439517 R 290315 CDS YP_001942474.1 189345945 6354397 complement(440360..443212) 1 NC_010803.1 PFAM: surface antigen (D15); Patatin; KEGG: cph:Cpha266_2033 patatin; surface antigen (D15) 443212 6354397 Clim_0402 Chlorobium limicola DSM 245 surface antigen (D15) YP_001942474.1 440360 R 290315 CDS YP_001942475.1 189345946 6354398 443255..444094 1 NC_010803.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: cph:Cpha266_2032 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; acetyl-CoA carboxylase, carboxyl transferase subunit beta 444094 6354398 Clim_0403 Chlorobium limicola DSM 245 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_001942475.1 443255 D 290315 CDS YP_001942476.1 189345947 6354399 complement(444104..444757) 1 NC_010803.1 flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase 444757 thyX 6354399 thyX Chlorobium limicola DSM 245 FAD-dependent thymidylate synthase YP_001942476.1 444104 R 290315 CDS YP_001942477.1 189345948 6354400 445024..445701 1 NC_010803.1 KEGG: pvi:Cvib_0441 ATP-dependent Clp protease, proteolytic subunit ClpP; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP 445701 6354400 Clim_0405 Chlorobium limicola DSM 245 ATP-dependent Clp protease, proteolytic subunit ClpP YP_001942477.1 445024 D 290315 CDS YP_001942478.1 189345949 6354401 445751..448465 1 NC_010803.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 448465 valS 6354401 valS Chlorobium limicola DSM 245 valyl-tRNA synthetase YP_001942478.1 445751 D 290315 CDS YP_001942479.1 189345950 6354402 448619..449518 1 NC_010803.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: cph:Cpha266_2028 RNA polymerase, sigma 32 subunit, RpoH; RNA polymerase sigma-32 subunit RpoH 449518 6354402 Clim_0407 Chlorobium limicola DSM 245 RNA polymerase sigma-32 subunit RpoH YP_001942479.1 448619 D 290315 CDS YP_001942480.1 189345951 6354403 complement(449554..450387) 1 NC_010803.1 PFAM: protein of unknown function DUF62; KEGG: cph:Cpha266_2027 protein of unknown function DUF62; hypothetical protein 450387 6354403 Clim_0408 Chlorobium limicola DSM 245 hypothetical protein YP_001942480.1 449554 R 290315 CDS YP_001942481.1 189345952 6354404 complement(450384..451466) 1 NC_010803.1 PFAM: permease YjgP/YjgQ family protein; KEGG: cph:Cpha266_2026 permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 451466 6354404 Clim_0409 Chlorobium limicola DSM 245 YjgP/YjgQ family permease YP_001942481.1 450384 R 290315 CDS YP_001942482.1 189345953 6354405 complement(451547..454486) 1 NC_010803.1 PFAM: peptidase M16 domain protein; KEGG: cph:Cpha266_2025 peptidase M16 domain protein; peptidase M16 domain-containing protein 454486 6354405 Clim_0410 Chlorobium limicola DSM 245 peptidase M16 domain-containing protein YP_001942482.1 451547 R 290315 CDS YP_001942483.1 189345954 6354406 454694..456748 1 NC_010803.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 456748 6354406 Clim_0411 Chlorobium limicola DSM 245 excinuclease ABC subunit B YP_001942483.1 454694 D 290315 CDS YP_001942484.1 189345955 6354407 456854..459055 1 NC_010803.1 KEGG: plt:Plut_0392 metal dependent phosphohydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA 459055 6354407 Clim_0412 Chlorobium limicola DSM 245 (p)ppGpp synthetase I SpoT/RelA YP_001942484.1 456854 D 290315 CDS YP_001942485.1 189345956 6354408 459137..459733 1 NC_010803.1 PFAM: LemA family protein; KEGG: cph:Cpha266_2022 LemA family protein; LemA family protein 459733 6354408 Clim_0413 Chlorobium limicola DSM 245 LemA family protein YP_001942485.1 459137 D 290315 CDS YP_001942486.1 189345957 6354409 459748..460488 1 NC_010803.1 PFAM: protein of unknown function DUF477; KEGG: cph:Cpha266_2021 protein of unknown function DUF477; hypothetical protein 460488 6354409 Clim_0414 Chlorobium limicola DSM 245 hypothetical protein YP_001942486.1 459748 D 290315 CDS YP_001942487.1 189345958 6354410 460520..461167 1 NC_010803.1 PFAM: protein of unknown function DUF477; KEGG: cph:Cpha266_2020 protein of unknown function DUF477; hypothetical protein 461167 6354410 Clim_0415 Chlorobium limicola DSM 245 hypothetical protein YP_001942487.1 460520 D 290315 CDS YP_001942488.1 189345959 6354411 461167..461343 1 NC_010803.1 KEGG: cph:Cpha266_2019 hypothetical protein; hypothetical protein 461343 6354411 Clim_0416 Chlorobium limicola DSM 245 hypothetical protein YP_001942488.1 461167 D 290315 CDS YP_001942489.1 189345960 6354412 461542..462630 1 NC_010803.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 462630 gcvT 6354412 gcvT Chlorobium limicola DSM 245 glycine cleavage system aminomethyltransferase T YP_001942489.1 461542 D 290315 CDS YP_001942490.1 189345961 6354413 462726..465170 1 NC_010803.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: cph:Cpha266_2016 cell divisionFtsK/SpoIIIE; cell division protein FtsK 465170 6354413 Clim_0418 Chlorobium limicola DSM 245 cell division protein FtsK YP_001942490.1 462726 D 290315 CDS YP_001942491.1 189345962 6354414 complement(465277..465537) 1 NC_010803.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: plt:Plut_0398 NifU protein; nitrogen-fixing NifU domain-containing protein 465537 6354414 Clim_0419 Chlorobium limicola DSM 245 nitrogen-fixing NifU domain-containing protein YP_001942491.1 465277 R 290315 CDS YP_001942492.1 189345963 6354415 complement(465630..466712) 1 NC_010803.1 PFAM: protein of unknown function DUF59; KEGG: cph:Cpha266_2014 protein of unknown function DUF59; hypothetical protein 466712 6354415 Clim_0420 Chlorobium limicola DSM 245 hypothetical protein YP_001942492.1 465630 R 290315 CDS YP_001942493.1 189345964 6354416 complement(466768..468081) 1 NC_010803.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 468081 engA 6354416 engA Chlorobium limicola DSM 245 GTP-binding protein EngA YP_001942493.1 466768 R 290315 CDS YP_001942494.1 189345965 6354417 468233..468682 1 NC_010803.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 468682 rplM 6354417 rplM Chlorobium limicola DSM 245 50S ribosomal protein L13 YP_001942494.1 468233 D 290315 CDS YP_001942495.1 189345966 6354418 468700..469089 1 NC_010803.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 469089 rpsI 6354418 rpsI Chlorobium limicola DSM 245 30S ribosomal protein S9 YP_001942495.1 468700 D 290315 CDS YP_001942496.1 189345967 6354419 469255..470025 1 NC_010803.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 470025 rpsB 6354419 rpsB Chlorobium limicola DSM 245 30S ribosomal protein S2 YP_001942496.1 469255 D 290315 CDS YP_001942497.1 189345968 6354420 470075..470941 1 NC_010803.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 470941 tsf 6354420 tsf Chlorobium limicola DSM 245 elongation factor Ts YP_001942497.1 470075 D 290315 CDS YP_001942498.1 189345969 6354421 471031..471750 1 NC_010803.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 471750 pyrH 6354421 pyrH Chlorobium limicola DSM 245 uridylate kinase YP_001942498.1 471031 D 290315 CDS YP_001942499.1 189345970 6354422 complement(471747..472226) 1 NC_010803.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 472226 recX 6354422 recX Chlorobium limicola DSM 245 recombination regulator RecX YP_001942499.1 471747 R 290315 CDS YP_001942500.1 189345971 6354423 472327..472743 1 NC_010803.1 PFAM: NUDIX hydrolase; KEGG: cph:Cpha266_0513 NUDIX hydrolase; NUDIX hydrolase 472743 6354423 Clim_0428 Chlorobium limicola DSM 245 NUDIX hydrolase YP_001942500.1 472327 D 290315 CDS YP_001942501.1 189345972 6354424 472873..474114 1 NC_010803.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: cph:Cpha266_0514 major facilitator superfamily MFS_1; major facilitator superfamily protein 474114 6354424 Clim_0429 Chlorobium limicola DSM 245 major facilitator superfamily protein YP_001942501.1 472873 D 290315 CDS YP_001942502.1 189345973 6354425 474349..482454 1 NC_010803.1 PFAM: Hemolysin-type calcium-binding region; Alkaline phosphatase; metallophosphoesterase; Ig family protein; SMART: Dystroglycan-type cadherin domain protein; KEGG: cch:Cag_0406 alkaline phosphatase; metallophosphoesterase 482454 6354425 Clim_0430 Chlorobium limicola DSM 245 metallophosphoesterase YP_001942502.1 474349 D 290315 CDS YP_001942503.1 189345974 6354426 complement(482572..483384) 1 NC_010803.1 KEGG: mag:amb0666 hypothetical protein; hypothetical protein 483384 6354426 Clim_0431 Chlorobium limicola DSM 245 hypothetical protein YP_001942503.1 482572 R 290315 CDS YP_001942504.1 189345975 6354427 483713..484708 1 NC_010803.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: cph:Cpha266_0749 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 484708 6354427 Clim_0432 Chlorobium limicola DSM 245 cation diffusion facilitator family transporter YP_001942504.1 483713 D 290315 CDS YP_001942505.1 189345976 6354428 484768..485769 1 NC_010803.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cte:CT0576 NAD(P)-dependent cholesterol dehydrogenase; NAD-dependent epimerase/dehydratase 485769 6354428 Clim_0433 Chlorobium limicola DSM 245 NAD-dependent epimerase/dehydratase YP_001942505.1 484768 D 290315 CDS YP_001942506.1 189345977 6354429 486063..486482 1 NC_010803.1 KEGG: cph:Cpha266_1269 cytochrome c, class I; cytochrome c, class I 486482 6354429 Clim_0434 Chlorobium limicola DSM 245 cytochrome c, class I YP_001942506.1 486063 D 290315 CDS YP_001942507.1 189345978 6354430 486497..487330 1 NC_010803.1 KEGG: cph:Cpha266_1270 hypothetical protein; hypothetical protein 487330 6354430 Clim_0435 Chlorobium limicola DSM 245 hypothetical protein YP_001942507.1 486497 D 290315 CDS YP_001942508.1 189345979 6354431 487506..487775 1 NC_010803.1 KEGG: gur:Gura_2922 transcriptional regulator; hypothetical protein 487775 6354431 Clim_0436 Chlorobium limicola DSM 245 hypothetical protein YP_001942508.1 487506 D 290315 CDS YP_001942509.1 189345980 6354432 488375..489355 1 NC_010803.1 KEGG: cph:Cpha266_1438 hypothetical protein; hypothetical protein 489355 6354432 Clim_0437 Chlorobium limicola DSM 245 hypothetical protein YP_001942509.1 488375 D 290315 CDS YP_001942510.1 189345981 6354433 489413..490213 1 NC_010803.1 TIGRFAM: CRISPR-associated protein Cas6; PFAM: protein of unknown function DUF57; KEGG: cph:Cpha266_2044 CRISPR-associated protein Cas6; CRISPR-associated protein Cas6 490213 6354433 Clim_0438 Chlorobium limicola DSM 245 CRISPR-associated protein Cas6 YP_001942510.1 489413 D 290315 CDS YP_001942511.1 189345982 6354434 490315..491397 1 NC_010803.1 KEGG: sfu:Sfum_3180 hypothetical protein; hypothetical protein 491397 6354434 Clim_0439 Chlorobium limicola DSM 245 hypothetical protein YP_001942511.1 490315 D 290315 CDS YP_001942512.1 189345983 6354435 491387..492178 1 NC_010803.1 KEGG: cph:Cpha266_0283 hypothetical protein; hypothetical protein 492178 6354435 Clim_0440 Chlorobium limicola DSM 245 hypothetical protein YP_001942512.1 491387 D 290315 CDS YP_001942513.1 189345984 6354436 492171..493559 1 NC_010803.1 TIGRFAM: CRISPR-associated CXXC_CXXC protein Cst1; PFAM: CRISPR-associated protein CXXC_CXXC region; KEGG: msi:Msm_0169 predicted CRISPR-associated protein; CRISPR-associated CXXC_CXXC protein Cst1 493559 6354436 Clim_0441 Chlorobium limicola DSM 245 CRISPR-associated CXXC_CXXC protein Cst1 YP_001942513.1 492171 D 290315 CDS YP_001942514.1 189345985 6354437 493582..494607 1 NC_010803.1 TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated regulatory protein, DevR family; KEGG: mac:MA3667 hypothetical protein; DevR family CRISPR-associated autoregulator 494607 6354437 Clim_0442 Chlorobium limicola DSM 245 DevR family CRISPR-associated autoregulator YP_001942514.1 493582 D 290315 CDS YP_001942515.1 189345986 6354438 494610..495230 1 NC_010803.1 TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: mba:Mbar_A0308 hypothetical protein; CRISPR-associated protein Cas5 family 495230 6354438 Clim_0443 Chlorobium limicola DSM 245 CRISPR-associated protein Cas5 family YP_001942515.1 494610 D 290315 CDS YP_001942516.1 189345987 6354439 495232..497484 1 NC_010803.1 KEGG: mba:Mbar_A0309 hypothetical protein; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; CRISPR-associated helicase Cas3 497484 6354439 Clim_0444 Chlorobium limicola DSM 245 CRISPR-associated helicase Cas3 YP_001942516.1 495232 D 290315 CDS YP_001942517.1 189345988 6354440 497489..498643 1 NC_010803.1 TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: fnu:FN1177 hypothetical protein; CRISPR-associated protein Cas1 498643 6354440 Clim_0445 Chlorobium limicola DSM 245 CRISPR-associated protein Cas1 YP_001942517.1 497489 D 290315 CDS YP_001942518.1 189345989 6354441 498775..499035 1 NC_010803.1 TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: tma:TM1796 hypothetical protein; CRISPR-associated protein Cas2 499035 6354441 Clim_0446 Chlorobium limicola DSM 245 CRISPR-associated protein Cas2 YP_001942518.1 498775 D 290315 CDS YP_001942519.1 189345990 6354442 499042..499542 1 NC_010803.1 TIGRFAM: CRISPR-associated protein Cas4; PFAM: protein of unknown function DUF83; KEGG: pgi:PG2015 CRISPR-associated protein Cas4; CRISPR-associated protein Cas4 499542 6354442 Clim_0447 Chlorobium limicola DSM 245 CRISPR-associated protein Cas4 YP_001942519.1 499042 D 290315 CDS YP_001942520.1 189345991 6354443 508433..510424 1 NC_010803.1 KEGG: cph:Cpha266_2380 hypothetical protein; hypothetical protein 510424 6354443 Clim_0448 Chlorobium limicola DSM 245 hypothetical protein YP_001942520.1 508433 D 290315 CDS YP_001942521.1 189345992 6354444 510427..510612 1 NC_010803.1 hypothetical protein 510612 6354444 Clim_0449 Chlorobium limicola DSM 245 hypothetical protein YP_001942521.1 510427 D 290315 CDS YP_001942522.1 189345993 6354445 510631..510876 1 NC_010803.1 KEGG: cph:Cpha266_2381 hypothetical protein; hypothetical protein 510876 6354445 Clim_0450 Chlorobium limicola DSM 245 hypothetical protein YP_001942522.1 510631 D 290315 CDS YP_001942523.1 189345994 6354446 510983..512656 1 NC_010803.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; KEGG: cph:Cpha266_2382 hypothetical protein; cyclopropane-fatty-acyl-phospholipid synthase 512656 6354446 Clim_0451 Chlorobium limicola DSM 245 cyclopropane-fatty-acyl-phospholipid synthase YP_001942523.1 510983 D 290315 CDS YP_001942524.1 189345995 6354447 512845..513864 1 NC_010803.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 513864 6354447 Clim_0452 Chlorobium limicola DSM 245 6-phosphofructokinase YP_001942524.1 512845 D 290315 CDS YP_001942525.1 189345996 6354448 513899..514474 1 NC_010803.1 KEGG: cph:Cpha266_1809 metal dependent phosphohydrolase; metal dependent phosphohydrolase 514474 6354448 Clim_0453 Chlorobium limicola DSM 245 metal dependent phosphohydrolase YP_001942525.1 513899 D 290315 CDS YP_001942526.1 189345997 6354449 complement(514488..515141) 1 NC_010803.1 PFAM: protein of unknown function DUF1003; KEGG: plt:Plut_1664 hypothetical protein; hypothetical protein 515141 6354449 Clim_0454 Chlorobium limicola DSM 245 hypothetical protein YP_001942526.1 514488 R 290315 CDS YP_001942527.1 189345998 6354450 complement(515188..518043) 1 NC_010803.1 TIGRFAM: excinuclease ABC subunit A; PFAM: ABC transporter; KEGG: cph:Cpha266_0517 excinuclease ABC subunit A; excinuclease ABC subunit A 518043 6354450 Clim_0455 Chlorobium limicola DSM 245 excinuclease ABC subunit A YP_001942527.1 515188 R 290315 CDS YP_001942528.1 189345999 6354451 518290..518454 1 NC_010803.1 hypothetical protein 518454 6354451 Clim_0456 Chlorobium limicola DSM 245 hypothetical protein YP_001942528.1 518290 D 290315 CDS YP_001942529.1 189346000 6354452 complement(518555..521305) 1 NC_010803.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 521305 6354452 Clim_0457 Chlorobium limicola DSM 245 pyruvate phosphate dikinase YP_001942529.1 518555 R 290315 CDS YP_001942530.1 189346001 6354453 521462..522343 1 NC_010803.1 PFAM: inner-membrane translocator; KEGG: cph:Cpha266_0519 inner-membrane translocator; inner-membrane translocator 522343 6354453 Clim_0458 Chlorobium limicola DSM 245 inner-membrane translocator YP_001942530.1 521462 D 290315 CDS YP_001942531.1 189346002 6354454 complement(522335..522991) 1 NC_010803.1 PFAM: ThiJ/PfpI domain protein; KEGG: cph:Cpha266_0520 isoprenoid biosynthesis protein with amidotransferase-like domain; isoprenoid biosynthesis protein with amidotransferase-like domain 522991 6354454 Clim_0459 Chlorobium limicola DSM 245 isoprenoid biosynthesis protein with amidotransferase-like domain YP_001942531.1 522335 R 290315 CDS YP_001942532.1 189346003 6354455 523141..523794 1 NC_010803.1 KEGG: cph:Cpha266_0523 hypothetical protein; hypothetical protein 523794 6354455 Clim_0460 Chlorobium limicola DSM 245 hypothetical protein YP_001942532.1 523141 D 290315 CDS YP_001942533.1 189346004 6354456 complement(523966..524472) 1 NC_010803.1 KEGG: cph:Cpha266_0524 hypothetical protein; hypothetical protein 524472 6354456 Clim_0461 Chlorobium limicola DSM 245 hypothetical protein YP_001942533.1 523966 R 290315 CDS YP_001942534.1 189346005 6354457 524588..525130 1 NC_010803.1 PFAM: isochorismatase hydrolase; KEGG: cph:Cpha266_0525 isochorismatase hydrolase; isochorismatase hydrolase 525130 6354457 Clim_0462 Chlorobium limicola DSM 245 isochorismatase hydrolase YP_001942534.1 524588 D 290315 CDS YP_001942535.1 189346006 6354458 complement(525380..526432) 1 NC_010803.1 KEGG: cph:Cpha266_0526 lipid-A-disaccharide synthase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase 526432 6354458 Clim_0463 Chlorobium limicola DSM 245 tetraacyldisaccharide 4'-kinase YP_001942535.1 525380 R 290315 CDS YP_001942536.1 189346007 6354459 complement(526425..527042) 1 NC_010803.1 PFAM: protein of unknown function DUF374; KEGG: cph:Cpha266_0527 protein of unknown function DUF374; hypothetical protein 527042 6354459 Clim_0464 Chlorobium limicola DSM 245 hypothetical protein YP_001942536.1 526425 R 290315 CDS YP_001942537.1 189346008 6354460 527203..528510 1 NC_010803.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 528510 6354460 Clim_0465 Chlorobium limicola DSM 245 phosphoribosylamine--glycine ligase YP_001942537.1 527203 D 290315 CDS YP_001942538.1 189346009 6354461 528540..528971 1 NC_010803.1 KEGG: cph:Cpha266_0529 hypothetical protein; hypothetical protein 528971 6354461 Clim_0466 Chlorobium limicola DSM 245 hypothetical protein YP_001942538.1 528540 D 290315 CDS YP_001942539.1 189346010 6354462 529074..530561 1 NC_010803.1 PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: cph:Cpha266_0530 carbamoyl-phosphate synthase large subunit; carbamoyl-phosphate synthase L chain ATP-binding 530561 6354462 Clim_0467 Chlorobium limicola DSM 245 carbamoyl-phosphate synthase L chain ATP-binding YP_001942539.1 529074 D 290315 CDS YP_001942540.1 189346011 6354463 530558..531334 1 NC_010803.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 531334 trpC 6354463 trpC Chlorobium limicola DSM 245 indole-3-glycerol-phosphate synthase YP_001942540.1 530558 D 290315 CDS YP_001942541.1 189346012 6354464 complement(531315..531980) 1 NC_010803.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: cph:Cpha266_0532 ribulose-5-phosphate 3-epimerase; Ribulose-phosphate 3-epimerase 531980 6354464 Clim_0469 Chlorobium limicola DSM 245 Ribulose-phosphate 3-epimerase YP_001942541.1 531315 R 290315 CDS YP_001942542.1 189346013 6354465 complement(532038..534230) 1 NC_010803.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: cph:Cpha266_0533 surface antigen (D15); surface antigen (D15) 534230 6354465 Clim_0470 Chlorobium limicola DSM 245 surface antigen (D15) YP_001942542.1 532038 R 290315 CDS YP_001942543.1 189346014 6354466 complement(534291..534518) 1 NC_010803.1 KEGG: plt:Plut_1647 hypothetical protein; hypothetical protein 534518 6354466 Clim_0471 Chlorobium limicola DSM 245 hypothetical protein YP_001942543.1 534291 R 290315 CDS YP_001942544.1 189346015 6354467 complement(534543..535214) 1 NC_010803.1 PFAM: Peptidase M23; KEGG: cph:Cpha266_0535 peptidase M23B; peptidase M23 535214 6354467 Clim_0472 Chlorobium limicola DSM 245 peptidase M23 YP_001942544.1 534543 R 290315 CDS YP_001942545.1 189346016 6354468 complement(535392..538223) 1 NC_010803.1 KEGG: cph:Cpha266_0536 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2; DNA polymerase I 538223 6354468 Clim_0473 Chlorobium limicola DSM 245 DNA polymerase I YP_001942545.1 535392 R 290315 CDS YP_001942546.1 189346017 6354469 complement(538220..539059) 1 NC_010803.1 PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: cph:Cpha266_0537 prephenate dehydratase; Prephenate dehydratase 539059 6354469 Clim_0474 Chlorobium limicola DSM 245 Prephenate dehydratase YP_001942546.1 538220 R 290315 CDS YP_001942547.1 189346018 6354470 539179..539931 1 NC_010803.1 PFAM: protein of unknown function DUF28; KEGG: cch:Cag_0165 hypothetical protein; hypothetical protein 539931 6354470 Clim_0475 Chlorobium limicola DSM 245 hypothetical protein YP_001942547.1 539179 D 290315 CDS YP_001942548.1 189346019 6354471 539937..540509 1 NC_010803.1 KEGG: cph:Cpha266_0539 crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; crossover junction endodeoxyribonuclease RuvC 540509 6354471 Clim_0476 Chlorobium limicola DSM 245 crossover junction endodeoxyribonuclease RuvC YP_001942548.1 539937 D 290315 CDS YP_001942549.1 189346020 6354472 540558..541124 1 NC_010803.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: pvi:Cvib_1430 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 541124 6354472 Clim_0477 Chlorobium limicola DSM 245 CDP-alcohol phosphatidyltransferase YP_001942549.1 540558 D 290315 CDS YP_001942550.1 189346021 6354473 541170..542201 1 NC_010803.1 PFAM: hypothetical protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: pmt:PMT0296 TPR repeat; hypothetical protein 542201 6354473 Clim_0478 Chlorobium limicola DSM 245 hypothetical protein YP_001942550.1 541170 D 290315 CDS YP_001942551.1 189346022 6354474 complement(542291..542962) 1 NC_010803.1 alkyl hydroperoxidase; catalyze the reduction of hydrogen peroxide to water and the reduction of alkyl hydroperoxides to the corresponding alcohols; peroxiredoxin 542962 6354474 Clim_0479 Chlorobium limicola DSM 245 peroxiredoxin YP_001942551.1 542291 R 290315 CDS YP_001942552.1 189346023 6354475 543225..543719 1 NC_010803.1 PFAM: ferric-uptake regulator; KEGG: cph:Cpha266_1963 ferric uptake regulator, Fur family; Fur family ferric uptake regulator 543719 6354475 Clim_0480 Chlorobium limicola DSM 245 Fur family ferric uptake regulator YP_001942552.1 543225 D 290315 CDS YP_001942553.1 189346024 6354476 complement(543788..544453) 1 NC_010803.1 KEGG: plt:Plut_2079 Fibrobacter succinogenes major paralogous domain; hypothetical protein 544453 6354476 Clim_0481 Chlorobium limicola DSM 245 hypothetical protein YP_001942553.1 543788 R 290315 CDS YP_001942554.1 189346025 6354477 544723..547098 1 NC_010803.1 KEGG: cph:Cpha266_1962 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; SMART: Cold shock protein; ribonuclease R 547098 6354477 Clim_0482 Chlorobium limicola DSM 245 ribonuclease R YP_001942554.1 544723 D 290315 CDS YP_001942555.1 189346026 6354478 complement(547137..547850) 1 NC_010803.1 PFAM: glutamine amidotransferase class-I; KEGG: cph:Cpha266_1960 glutamine amidotransferase class-I; glutamine amidotransferase 547850 6354478 Clim_0483 Chlorobium limicola DSM 245 glutamine amidotransferase YP_001942555.1 547137 R 290315 CDS YP_001942556.1 189346027 6354479 complement(547894..550437) 1 NC_010803.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cph:Cpha266_1957 multi-sensor hybrid histidine kinase; integral membrane sensor hybrid histidine kinase 550437 6354479 Clim_0484 Chlorobium limicola DSM 245 integral membrane sensor hybrid histidine kinase YP_001942556.1 547894 R 290315 CDS YP_001942557.1 189346028 6354480 550833..552077 1 NC_010803.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: cph:Cpha266_1956 hypothetical protein; hypothetical protein 552077 6354480 Clim_0485 Chlorobium limicola DSM 245 hypothetical protein YP_001942557.1 550833 D 290315 CDS YP_001942558.1 189346029 6354481 complement(552118..552468) 1 NC_010803.1 hypothetical protein 552468 6354481 Clim_0486 Chlorobium limicola DSM 245 hypothetical protein YP_001942558.1 552118 R 290315 CDS YP_001942559.1 189346030 6354482 complement(552506..552910) 1 NC_010803.1 SMART: Rhodanese domain protein; KEGG: pvi:Cvib_0577 rhodanese domain protein; rhodanese domain-containing protein 552910 6354482 Clim_0487 Chlorobium limicola DSM 245 rhodanese domain-containing protein YP_001942559.1 552506 R 290315 CDS YP_001942560.1 189346031 6354484 complement(553458..553694) 1 NC_010803.1 hypothetical protein 553694 6354484 Clim_0488 Chlorobium limicola DSM 245 hypothetical protein YP_001942560.1 553458 R 290315 CDS YP_001942561.1 189346032 6354835 complement(553743..553856) 1 NC_010803.1 hypothetical protein 553856 6354835 Clim_0489 Chlorobium limicola DSM 245 hypothetical protein YP_001942561.1 553743 R 290315 CDS YP_001942562.1 189346033 6354836 554245..554622 1 NC_010803.1 KEGG: rso:RS02604 HNS-like transcription regulator protein; hypothetical protein 554622 6354836 Clim_0490 Chlorobium limicola DSM 245 hypothetical protein YP_001942562.1 554245 D 290315 CDS YP_001942563.1 189346034 6354838 complement(555247..556446) 1 NC_010803.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 556446 6354838 Clim_0491 Chlorobium limicola DSM 245 tryptophan synthase subunit beta YP_001942563.1 555247 R 290315 CDS YP_001942564.1 189346035 6354839 556662..559310 1 NC_010803.1 KEGG: cph:Cpha266_1942 hypothetical protein; hypothetical protein 559310 6354839 Clim_0492 Chlorobium limicola DSM 245 hypothetical protein YP_001942564.1 556662 D 290315 CDS YP_001942565.1 189346036 6354840 complement(559326..560198) 1 NC_010803.1 PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_1941 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 560198 6354840 Clim_0493 Chlorobium limicola DSM 245 alpha/beta hydrolase fold protein YP_001942565.1 559326 R 290315 CDS YP_001942566.1 189346037 6354841 560329..560760 1 NC_010803.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: plt:Plut_0538 hypothetical protein; BadM/Rrf2 family transcriptional regulator 560760 6354841 Clim_0494 Chlorobium limicola DSM 245 BadM/Rrf2 family transcriptional regulator YP_001942566.1 560329 D 290315 CDS YP_001942567.1 189346038 6354842 560847..563705 1 NC_010803.1 TIGRFAM: excinuclease ABC subunit A; PFAM: ABC transporter; KEGG: cph:Cpha266_1939 excinuclease ABC subunit A; excinuclease ABC subunit A 563705 6354842 Clim_0495 Chlorobium limicola DSM 245 excinuclease ABC subunit A YP_001942567.1 560847 D 290315 CDS YP_001942568.1 189346039 6354843 complement(563719..564114) 1 NC_010803.1 KEGG: pvi:Cvib_0584 hypothetical protein; hypothetical protein 564114 6354843 Clim_0496 Chlorobium limicola DSM 245 hypothetical protein YP_001942568.1 563719 R 290315 CDS YP_001942569.1 189346040 6354844 564194..564481 1 NC_010803.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 564481 groES 6354844 groES Chlorobium limicola DSM 245 co-chaperonin GroES YP_001942569.1 564194 D 290315 CDS YP_001942570.1 189346041 6354845 564527..566170 1 NC_010803.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 566170 groEL 6354845 groEL Chlorobium limicola DSM 245 chaperonin GroEL YP_001942570.1 564527 D 290315 CDS YP_001942571.1 189346042 6354846 566307..566987 1 NC_010803.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: plt:Plut_0543 ExsB; exsB protein 566987 6354846 Clim_0499 Chlorobium limicola DSM 245 exsB protein YP_001942571.1 566307 D 290315 CDS YP_001942572.1 189346043 6354847 567006..567812 1 NC_010803.1 PFAM: Abortive infection protein; KEGG: cph:Cpha266_1934 abortive infection protein; abortive infection protein 567812 6354847 Clim_0500 Chlorobium limicola DSM 245 abortive infection protein YP_001942572.1 567006 D 290315 CDS YP_001942573.1 189346044 6354848 567835..568638 1 NC_010803.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 568638 trpA 6354848 trpA Chlorobium limicola DSM 245 tryptophan synthase subunit alpha YP_001942573.1 567835 D 290315 CDS YP_001942574.1 189346045 6354849 568652..569719 1 NC_010803.1 PFAM: glycosyl transferase family 2; KEGG: cph:Cpha266_1932 glycosyl transferase, family 2; family 2 glycosyl transferase 569719 6354849 Clim_0502 Chlorobium limicola DSM 245 family 2 glycosyl transferase YP_001942574.1 568652 D 290315 CDS YP_001942575.1 189346046 6354850 complement(569688..570728) 1 NC_010803.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: pvi:Cvib_0591 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 570728 6354850 Clim_0503 Chlorobium limicola DSM 245 NAD-dependent epimerase/dehydratase YP_001942575.1 569688 R 290315 CDS YP_001942576.1 189346047 6354851 complement(570784..571326) 1 NC_010803.1 PFAM: cyclase/dehydrase; KEGG: cph:Cpha266_1930 cyclase/dehydrase; cyclase/dehydrase 571326 6354851 Clim_0504 Chlorobium limicola DSM 245 cyclase/dehydrase YP_001942576.1 570784 R 290315 CDS YP_001942577.1 189346048 6354852 complement(571354..571764) 1 NC_010803.1 PFAM: thioesterase superfamily protein; KEGG: cph:Cpha266_1929 thioesterase superfamily protein; thioesterase superfamily protein 571764 6354852 Clim_0505 Chlorobium limicola DSM 245 thioesterase superfamily protein YP_001942577.1 571354 R 290315 CDS YP_001942578.1 189346049 6354853 571984..572442 1 NC_010803.1 KEGG: mfa:Mfla_1836 hypothetical protein; hypothetical protein 572442 6354853 Clim_0506 Chlorobium limicola DSM 245 hypothetical protein YP_001942578.1 571984 D 290315 CDS YP_001942579.1 189346050 6354855 572982..573362 1 NC_010803.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: cph:Cpha266_1928 protein of unknown function DUF306, MetA and HslJ; hypothetical protein 573362 6354855 Clim_0508 Chlorobium limicola DSM 245 hypothetical protein YP_001942579.1 572982 D 290315 CDS YP_001942580.1 189346051 6354856 573451..574425 1 NC_010803.1 TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: cph:Cpha266_1368 Na+/Ca+ antiporter, CaCA family; CaCA family Na+/Ca+ antiporter 574425 6354856 Clim_0509 Chlorobium limicola DSM 245 CaCA family Na+/Ca+ antiporter YP_001942580.1 573451 D 290315 CDS YP_001942581.1 189346052 6354857 complement(574439..575644) 1 NC_010803.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; S-adenosylmethionine synthetase 575644 6354857 Clim_0510 Chlorobium limicola DSM 245 S-adenosylmethionine synthetase YP_001942581.1 574439 R 290315 CDS YP_001942582.1 189346053 6354858 575813..576958 1 NC_010803.1 PFAM: glycosyl transferase group 1; KEGG: cph:Cpha266_0799 glycosyl transferase, group 1; group 1 glycosyl transferase 576958 6354858 Clim_0511 Chlorobium limicola DSM 245 group 1 glycosyl transferase YP_001942582.1 575813 D 290315 CDS YP_001942583.1 189346054 6354859 complement(576981..578009) 1 NC_010803.1 KEGG: plt:Plut_0553 cell shape determining protein MreB/Mrl; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; SMART: actin/actin family protein; rod shape-determining protein MreB 578009 6354859 Clim_0512 Chlorobium limicola DSM 245 rod shape-determining protein MreB YP_001942583.1 576981 R 290315 CDS YP_001942584.1 189346055 6354860 578273..579559 1 NC_010803.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 579559 hisD 6354860 hisD Chlorobium limicola DSM 245 histidinol dehydrogenase YP_001942584.1 578273 D 290315 CDS YP_001942585.1 189346056 6354861 579556..580587 1 NC_010803.1 TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: pvi:Cvib_0597 queuosine biosynthesis protein; S-adenosylmethionine/tRNA-ribosyltransferase- isomerase 580587 6354861 Clim_0514 Chlorobium limicola DSM 245 S-adenosylmethionine/tRNA-ribosyltransferase- isomerase YP_001942585.1 579556 D 290315 CDS YP_001942586.1 189346057 6354862 580889..583459 1 NC_010803.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 583459 6354862 Clim_0515 Chlorobium limicola DSM 245 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_001942586.1 580889 D 290315 CDS YP_001942587.1 189346058 6354863 complement(583661..583810) 1 NC_010803.1 hypothetical protein 583810 6354863 Clim_0516 Chlorobium limicola DSM 245 hypothetical protein YP_001942587.1 583661 R 290315 CDS YP_001942588.1 189346059 6354864 complement(584207..584719) 1 NC_010803.1 hypothetical protein 584719 6354864 Clim_0517 Chlorobium limicola DSM 245 hypothetical protein YP_001942588.1 584207 R 290315 CDS YP_001942589.1 189346060 6354865 585521..585682 1 NC_010803.1 hypothetical protein 585682 6354865 Clim_0518 Chlorobium limicola DSM 245 hypothetical protein YP_001942589.1 585521 D 290315 CDS YP_001942590.1 189346061 6354866 586066..586359 1 NC_010803.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: neu:NE1339 H-NS histone family; histone family protein nucleoid-structuring protein H-NS 586359 6354866 Clim_0519 Chlorobium limicola DSM 245 histone family protein nucleoid-structuring protein H-NS YP_001942590.1 586066 D 290315 CDS YP_001942591.1 189346062 6354868 complement(586947..587846) 1 NC_010803.1 PFAM: Auxin Efflux Carrier; KEGG: cph:Cpha266_0806 auxin efflux carrier; auxin efflux carrier 587846 6354868 Clim_0520 Chlorobium limicola DSM 245 auxin efflux carrier YP_001942591.1 586947 R 290315 CDS YP_001942592.1 189346063 6354872 complement(588243..589517) 1 NC_010803.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 589517 6354872 Clim_0521 Chlorobium limicola DSM 245 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001942592.1 588243 R 290315 CDS YP_001942593.1 189346064 6354873 589710..591260 1 NC_010803.1 PFAM: Peptidase M23; KEGG: cph:Cpha266_0808 peptidase M23B; peptidase M23 591260 6354873 Clim_0522 Chlorobium limicola DSM 245 peptidase M23 YP_001942593.1 589710 D 290315 CDS YP_001942594.1 189346065 6354874 591266..591820 1 NC_010803.1 KEGG: plt:Plut_0563 hypothetical protein; hypothetical protein 591820 6354874 Clim_0523 Chlorobium limicola DSM 245 hypothetical protein YP_001942594.1 591266 D 290315 CDS YP_001942595.1 189346066 6354875 591817..592668 1 NC_010803.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 592668 6354875 Clim_0524 Chlorobium limicola DSM 245 NAD synthetase YP_001942595.1 591817 D 290315 CDS YP_001942596.1 189346067 6354876 complement(592789..594384) 1 NC_010803.1 KEGG: pvi:Cvib_1210 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; L-aspartate oxidase 594384 6354876 Clim_0525 Chlorobium limicola DSM 245 L-aspartate oxidase YP_001942596.1 592789 R 290315 CDS YP_001942597.1 189346068 6354877 complement(594406..595020) 1 NC_010803.1 PFAM: SNARE associated Golgi protein; KEGG: cph:Cpha266_0812 DedA family protein; hypothetical protein 595020 6354877 Clim_0526 Chlorobium limicola DSM 245 hypothetical protein YP_001942597.1 594406 R 290315 CDS YP_001942598.1 189346069 6354878 complement(595163..595708) 1 NC_010803.1 PvlArgDC; converts arginine to agmatine and carbon dioxide; has a role in polyamine metabolism; in Methanococcus jannaschii this enzyme self-cleaves at serine-serine bond to form alpha (N-terminal) and beta (C-terminal) subunits; the alpha subunit contains a catalytically active pyruvoyl group; the beta subunit contains the substrate-binding residues; forms homotrimers of the alpha/beta complex; pyruvoyl-dependent arginine decarboxylase 595708 6354878 Clim_0527 Chlorobium limicola DSM 245 pyruvoyl-dependent arginine decarboxylase YP_001942598.1 595163 R 290315 CDS YP_001942599.1 189346070 6354879 complement(595794..597011) 1 NC_010803.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 597011 6354879 Clim_0528 Chlorobium limicola DSM 245 tyrosyl-tRNA synthetase YP_001942599.1 595794 R 290315 CDS YP_001942600.1 189346071 6354880 complement(597027..597500) 1 NC_010803.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 597500 smpB 6354880 smpB Chlorobium limicola DSM 245 SsrA-binding protein YP_001942600.1 597027 R 290315 CDS YP_001942601.1 189346072 6354881 complement(597508..598995) 1 NC_010803.1 PFAM: FAD linked oxidase domain protein; KEGG: cph:Cpha266_0816 FAD linked oxidase domain protein; D-lactate dehydrogenase 598995 6354881 Clim_0530 Chlorobium limicola DSM 245 D-lactate dehydrogenase YP_001942601.1 597508 R 290315 CDS YP_001942602.1 189346073 6354882 complement(598992..600932) 1 NC_010803.1 KEGG: cph:Cpha266_0817 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 600932 6354882 Clim_0531 Chlorobium limicola DSM 245 penicillin-binding protein 2 YP_001942602.1 598992 R 290315 CDS YP_001942603.1 189346074 6354883 complement(600936..601427) 1 NC_010803.1 KEGG: cph:Cpha266_0818 hypothetical protein; hypothetical protein 601427 6354883 Clim_0532 Chlorobium limicola DSM 245 hypothetical protein YP_001942603.1 600936 R 290315 CDS YP_001942604.1 189346075 6354884 complement(601431..602291) 1 NC_010803.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 602291 6354884 Clim_0533 Chlorobium limicola DSM 245 rod shape-determining protein MreC YP_001942604.1 601431 R 290315 CDS YP_001942605.1 189346076 6354885 602460..602849 1 NC_010803.1 PFAM: chaperonin Cpn10; KEGG: cph:Cpha266_0820 chaperonin Cpn10; chaperonin Cpn10 602849 6354885 Clim_0534 Chlorobium limicola DSM 245 chaperonin Cpn10 YP_001942605.1 602460 D 290315 CDS YP_001942606.1 189346077 6354886 602928..603884 1 NC_010803.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 603884 6354886 Clim_0535 Chlorobium limicola DSM 245 quinolinate synthetase YP_001942606.1 602928 D 290315 CDS YP_001942607.1 189346078 6354887 604162..604887 1 NC_010803.1 KEGG: cph:Cpha266_0822 hypothetical protein; hypothetical protein 604887 6354887 Clim_0536 Chlorobium limicola DSM 245 hypothetical protein YP_001942607.1 604162 D 290315 CDS YP_001942608.1 189346079 6354888 604962..605978 1 NC_010803.1 PFAM: pentapeptide repeat protein; KEGG: cph:Cpha266_0823 pentapeptide repeat protein; pentapeptide repeat-containing protein 605978 6354888 Clim_0537 Chlorobium limicola DSM 245 pentapeptide repeat-containing protein YP_001942608.1 604962 D 290315 CDS YP_001942609.1 189346080 6354889 complement(606273..606452) 1 NC_010803.1 hypothetical protein 606452 6354889 Clim_0538 Chlorobium limicola DSM 245 hypothetical protein YP_001942609.1 606273 R 290315 CDS YP_001942610.1 189346081 6354890 606817..610257 1 NC_010803.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 610257 6354890 Clim_0539 Chlorobium limicola DSM 245 ribonucleotide-diphosphate reductase subunit alpha YP_001942610.1 606817 D 290315 CDS YP_001942611.1 189346082 6354891 complement(610317..611042) 1 NC_010803.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: cph:Cpha266_1781 cell division ATP-binding protein FtsE; ABC transporter 611042 6354891 Clim_0540 Chlorobium limicola DSM 245 ABC transporter YP_001942611.1 610317 R 290315 CDS YP_001942612.1 189346083 6354892 complement(611039..612052) 1 NC_010803.1 KEGG: cph:Cpha266_1780 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 612052 6354892 Clim_0541 Chlorobium limicola DSM 245 4-hydroxythreonine-4-phosphate dehydrogenase YP_001942612.1 611039 R 290315 CDS YP_001942613.1 189346084 6354893 complement(612055..612519) 1 NC_010803.1 KEGG: cph:Cpha266_1779 hypothetical protein; hypothetical protein 612519 6354893 Clim_0542 Chlorobium limicola DSM 245 hypothetical protein YP_001942613.1 612055 R 290315 CDS YP_001942614.1 189346085 6354894 612809..613555 1 NC_010803.1 PFAM: hypothetical protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: cph:Cpha266_2529 tetratricopeptide TPR_2 repeat protein; hypothetical protein 613555 6354894 Clim_0543 Chlorobium limicola DSM 245 hypothetical protein YP_001942614.1 612809 D 290315 CDS YP_001942615.1 189346086 6354895 complement(613647..614903) 1 NC_010803.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: cph:Cpha266_1251 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 614903 6354895 Clim_0544 Chlorobium limicola DSM 245 DEAD/DEAH box helicase YP_001942615.1 613647 R 290315 CDS YP_001942616.1 189346087 6354896 615145..615504 1 NC_010803.1 KEGG: cph:Cpha266_1506 hypothetical protein; hypothetical protein 615504 6354896 Clim_0545 Chlorobium limicola DSM 245 hypothetical protein YP_001942616.1 615145 D 290315 CDS YP_001942617.1 189346088 6354897 complement(615464..616774) 1 NC_010803.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: cch:Cag_1115 3-deoxy-D-manno-octulosonic-acid transferase; three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein 616774 6354897 Clim_0546 Chlorobium limicola DSM 245 three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein YP_001942617.1 615464 R 290315 CDS YP_001942618.1 189346089 6354898 616974..619199 1 NC_010803.1 PFAM: UvrD/REP helicase; KEGG: cph:Cpha266_0674 ATP-dependent DNA helicase PcrA; UvrD/REP helicase 619199 6354898 Clim_0547 Chlorobium limicola DSM 245 UvrD/REP helicase YP_001942618.1 616974 D 290315 CDS YP_001942619.1 189346090 6354899 619278..620309 1 NC_010803.1 KEGG: cph:Cpha266_0675 hypothetical protein; hypothetical protein 620309 6354899 Clim_0548 Chlorobium limicola DSM 245 hypothetical protein YP_001942619.1 619278 D 290315 CDS YP_001942620.1 189346091 6354900 620335..620913 1 NC_010803.1 PFAM: nitroreductase; KEGG: cph:Cpha266_0676 nitroreductase; nitroreductase 620913 6354900 Clim_0549 Chlorobium limicola DSM 245 nitroreductase YP_001942620.1 620335 D 290315 CDS YP_001942621.1 189346092 6354901 620934..621518 1 NC_010803.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 621518 aat 6354901 aat Chlorobium limicola DSM 245 leucyl/phenylalanyl-tRNA--protein transferase YP_001942621.1 620934 D 290315 CDS YP_001942622.1 189346093 6354902 621591..622892 1 NC_010803.1 KEGG: cph:Cpha266_0678 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; arsenite-activated ATPase ArsA 622892 6354902 Clim_0551 Chlorobium limicola DSM 245 arsenite-activated ATPase ArsA YP_001942622.1 621591 D 290315 CDS YP_001942623.1 189346094 6354903 623038..623925 1 NC_010803.1 KEGG: cph:Cpha266_0679 enoyl-[acyl-carrier-protein] reductase [NADH]; enoyl-(acyl carrier protein) reductase 623925 6354903 Clim_0552 Chlorobium limicola DSM 245 enoyl-(acyl carrier protein) reductase YP_001942623.1 623038 D 290315 CDS YP_001942624.1 189346095 6354904 624283..626508 1 NC_010803.1 KEGG: cph:Cpha266_0680 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type; isocitrate dehydrogenase 626508 6354904 Clim_0553 Chlorobium limicola DSM 245 isocitrate dehydrogenase YP_001942624.1 624283 D 290315 CDS YP_001942625.1 189346096 6354905 complement(626610..627242) 1 NC_010803.1 KEGG: cph:Cpha266_0681 hypothetical protein; hypothetical protein 627242 6354905 Clim_0554 Chlorobium limicola DSM 245 hypothetical protein YP_001942625.1 626610 R 290315 CDS YP_001942626.1 189346097 6354906 complement(627259..628167) 1 NC_010803.1 PFAM: pirin; KEGG: cph:Cpha266_0684 pirin domain protein domain protein; pirin 628167 6354906 Clim_0555 Chlorobium limicola DSM 245 pirin YP_001942626.1 627259 R 290315 CDS YP_001942627.1 189346098 6354907 628345..629175 1 NC_010803.1 PFAM: metallophosphoesterase; KEGG: cph:Cpha266_0685 metallophosphoesterase; metallophosphoesterase 629175 6354907 Clim_0556 Chlorobium limicola DSM 245 metallophosphoesterase YP_001942627.1 628345 D 290315 CDS YP_001942628.1 189346099 6354908 complement(629689..630687) 1 NC_010803.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 630687 6354908 Clim_0557 Chlorobium limicola DSM 245 fructose-1,6-bisphosphatase YP_001942628.1 629689 R 290315 CDS YP_001942629.1 189346100 6354909 630881..632596 1 NC_010803.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cph:Cpha266_0687 single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 632596 6354909 Clim_0558 Chlorobium limicola DSM 245 single-stranded-DNA-specific exonuclease RecJ YP_001942629.1 630881 D 290315 CDS YP_001942630.1 189346101 6354910 complement(632970..634373) 1 NC_010803.1 catalyzes the zinc dependent deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis and catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP in fatty acid biosynthesis; bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase 634373 6354910 Clim_0559 Chlorobium limicola DSM 245 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase YP_001942630.1 632970 R 290315 CDS YP_001942631.1 189346102 6354911 complement(634497..636329) 1 NC_010803.1 KEGG: cph:Cpha266_0542 ABC-type branched-chain amino acid transport systems periplasmic component-like; branched chain amino acid ABC transporter substrate-binding protein 636329 6354911 Clim_0560 Chlorobium limicola DSM 245 branched chain amino acid ABC transporter substrate-binding protein YP_001942631.1 634497 R 290315 CDS YP_001942632.1 189346103 6354912 complement(636332..637138) 1 NC_010803.1 PFAM: inositol monophosphatase; KEGG: cph:Cpha266_0543 inositol-phosphate phosphatase; inositol-phosphate phosphatase 637138 6354912 Clim_0561 Chlorobium limicola DSM 245 inositol-phosphate phosphatase YP_001942632.1 636332 R 290315 CDS YP_001942633.1 189346104 6354913 637336..637815 1 NC_010803.1 PFAM: TspO/MBR family protein; KEGG: cph:Cpha266_0544 TspO and MBR like proteins; TspO and MBR-like protein 637815 6354913 Clim_0562 Chlorobium limicola DSM 245 TspO and MBR-like protein YP_001942633.1 637336 D 290315 CDS YP_001942634.1 189346105 6354914 complement(638170..638721) 1 NC_010803.1 KEGG: cph:Cpha266_0295 hypothetical protein; hypothetical protein 638721 6354914 Clim_0563 Chlorobium limicola DSM 245 hypothetical protein YP_001942634.1 638170 R 290315 CDS YP_001942635.1 189346106 6354915 639179..639508 1 NC_010803.1 KEGG: mbu:Mbur_0296 hypothetical protein; hypothetical protein 639508 6354915 Clim_0564 Chlorobium limicola DSM 245 hypothetical protein YP_001942635.1 639179 D 290315 CDS YP_001942636.1 189346107 6354831 639676..640002 1 NC_010803.1 KEGG: ppr:PBPRA1532 hypothetical protein; hypothetical protein 640002 6354831 Clim_0565 Chlorobium limicola DSM 245 hypothetical protein YP_001942636.1 639676 D 290315 CDS YP_001942637.1 189346108 6354014 640078..640470 1 NC_010803.1 KEGG: cbe:Cbei_2837 plasmid pRiA4b ORF-3 family protein; plasmid pRiA4b ORF-3 family protein 640470 6354014 Clim_0566 Chlorobium limicola DSM 245 plasmid pRiA4b ORF-3 family protein YP_001942637.1 640078 D 290315 CDS YP_001942638.1 189346109 6354015 640612..640917 1 NC_010803.1 KEGG: cch:Cag_0270 hypothetical protein; hypothetical protein 640917 6354015 Clim_0567 Chlorobium limicola DSM 245 hypothetical protein YP_001942638.1 640612 D 290315 CDS YP_001942639.1 189346110 6354016 640927..641202 1 NC_010803.1 KEGG: cch:Cag_0271 hypothetical protein; hypothetical protein 641202 6354016 Clim_0568 Chlorobium limicola DSM 245 hypothetical protein YP_001942639.1 640927 D 290315 CDS YP_001942640.1 189346111 6354018 642035..642247 1 NC_010803.1 hypothetical protein 642247 6354018 Clim_0570 Chlorobium limicola DSM 245 hypothetical protein YP_001942640.1 642035 D 290315 CDS YP_001942641.1 189346112 6354019 642393..643592 1 NC_010803.1 KEGG: sdn:Sden_3581 hypothetical protein; hypothetical protein 643592 6354019 Clim_0571 Chlorobium limicola DSM 245 hypothetical protein YP_001942641.1 642393 D 290315 CDS YP_001942642.1 189346113 6354020 643634..644152 1 NC_010803.1 PFAM: Domain of unknown function DUF1863; KEGG: neu:NE2099 hypothetical protein; hypothetical protein 644152 6354020 Clim_0572 Chlorobium limicola DSM 245 hypothetical protein YP_001942642.1 643634 D 290315 CDS YP_001942643.1 189346114 6354021 644276..644950 1 NC_010803.1 hypothetical protein 644950 6354021 Clim_0573 Chlorobium limicola DSM 245 hypothetical protein YP_001942643.1 644276 D 290315 CDS YP_001942644.1 189346115 6354022 645022..646389 1 NC_010803.1 PFAM: transposase IS4 family protein; KEGG: cph:Cpha266_2634 transposase, IS4 family protein; transposase IS4 family protein 646389 6354022 Clim_0574 Chlorobium limicola DSM 245 transposase IS4 family protein YP_001942644.1 645022 D 290315 CDS YP_001942645.1 189346116 6354023 646559..647569 1 NC_010803.1 PFAM: Patatin; KEGG: mab:MAB_2091 hypothetical protein similar to patatin; patatin 647569 6354023 Clim_0575 Chlorobium limicola DSM 245 patatin YP_001942645.1 646559 D 290315 CDS YP_001942646.1 189346117 6354025 647848..652740 1 NC_010803.1 KEGG: noc:Noc_0920 superfamily I DNA and RNA helicases and helicase subunits-like; superfamily I DNA and RNA helicase subunits-like protein 652740 6354025 Clim_0577 Chlorobium limicola DSM 245 superfamily I DNA and RNA helicase subunits-like protein YP_001942646.1 647848 D 290315 CDS YP_001942647.1 189346118 6354026 652878..653246 1 NC_010803.1 KEGG: cph:Cpha266_1695 hypothetical protein; hypothetical protein 653246 6354026 Clim_0578 Chlorobium limicola DSM 245 hypothetical protein YP_001942647.1 652878 D 290315 CDS YP_001942648.1 189346119 6354027 653356..654330 1 NC_010803.1 KEGG: amr:AM1_4420 esterase; esterase 654330 6354027 Clim_0579 Chlorobium limicola DSM 245 esterase YP_001942648.1 653356 D 290315 CDS YP_001942649.1 189346120 6354028 654421..654657 1 NC_010803.1 hypothetical protein 654657 6354028 Clim_0580 Chlorobium limicola DSM 245 hypothetical protein YP_001942649.1 654421 D 290315 CDS YP_001942650.1 189346121 6354029 654758..655039 1 NC_010803.1 KEGG: gur:Gura_0605 hypothetical protein; hypothetical protein 655039 6354029 Clim_0581 Chlorobium limicola DSM 245 hypothetical protein YP_001942650.1 654758 D 290315 CDS YP_001942651.1 189346122 6354030 655086..655562 1 NC_010803.1 KEGG: sus:Acid_3466 hypothetical protein; hypothetical protein 655562 6354030 Clim_0582 Chlorobium limicola DSM 245 hypothetical protein YP_001942651.1 655086 D 290315 CDS YP_001942652.1 189346123 6354031 655967..656173 1 NC_010803.1 KEGG: cph:Cpha266_2113 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 656173 6354031 Clim_0583 Chlorobium limicola DSM 245 transposase IS3/IS911 family protein YP_001942652.1 655967 D 290315 CDS YP_001942653.1 189346124 6354033 complement(657075..658673) 1 NC_010803.1 PFAM: hypothetical protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: pmt:PMT0296 TPR repeat; hypothetical protein 658673 6354033 Clim_0585 Chlorobium limicola DSM 245 hypothetical protein YP_001942653.1 657075 R 290315 CDS YP_001942654.1 189346125 6354034 659149..659616 1 NC_010803.1 SMART: HNH nuclease; KEGG: aau:AAur_1020 HNH endonuclease domain protein; HNH nuclease 659616 6354034 Clim_0586 Chlorobium limicola DSM 245 HNH nuclease YP_001942654.1 659149 D 290315 CDS YP_001942655.1 189346126 6354035 659691..660164 1 NC_010803.1 KEGG: sus:Acid_3466 hypothetical protein; hypothetical protein 660164 6354035 Clim_0587 Chlorobium limicola DSM 245 hypothetical protein YP_001942655.1 659691 D 290315 CDS YP_001942656.1 189346127 6354037 660454..660642 1 NC_010803.1 KEGG: plt:Plut_0648 hypothetical protein; hypothetical protein 660642 6354037 Clim_0589 Chlorobium limicola DSM 245 hypothetical protein YP_001942656.1 660454 D 290315 CDS YP_001942657.1 189346128 6354038 660620..660913 1 NC_010803.1 PFAM: helix-turn-helix domain protein; KEGG: plt:Plut_0647 XRE family transcriptional regulator; XRE family transcriptional regulator 660913 6354038 Clim_0590 Chlorobium limicola DSM 245 XRE family transcriptional regulator YP_001942657.1 660620 D 290315 CDS YP_001942658.1 189346129 6354039 661359..661589 1 NC_010803.1 TIGRFAM: addiction module component, TIGR02574 family; PFAM: addiction module component CHP02574 family protein; KEGG: swo:Swol_1551 hypothetical protein; addiction module protein 661589 6354039 Clim_0591 Chlorobium limicola DSM 245 addiction module protein YP_001942658.1 661359 D 290315 CDS YP_001942659.1 189346130 6354041 complement(662105..663409) 1 NC_010803.1 KEGG: cph:Cpha266_0774 hypothetical protein; hypothetical protein 663409 6354041 Clim_0593 Chlorobium limicola DSM 245 hypothetical protein YP_001942659.1 662105 R 290315 CDS YP_001942660.1 189346131 6354042 663721..664206 1 NC_010803.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: gur:Gura_0848 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 664206 6354042 Clim_0594 Chlorobium limicola DSM 245 3-demethylubiquinone-9 3-methyltransferase YP_001942660.1 663721 D 290315 CDS YP_001942661.1 189346132 6354043 664460..664873 1 NC_010803.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: net:Neut_1850 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 664873 6354043 Clim_0595 Chlorobium limicola DSM 245 Glyoxalase/bleomycin resistance protein/dioxygenase YP_001942661.1 664460 D 290315 CDS YP_001942662.1 189346133 6354044 665026..665328 1 NC_010803.1 KEGG: cph:Cpha266_0282 ferredoxin, 2Fe-2S; ferredoxin, 2Fe-2S 665328 6354044 Clim_0596 Chlorobium limicola DSM 245 ferredoxin, 2Fe-2S YP_001942662.1 665026 D 290315 CDS YP_001942663.1 189346134 6354045 complement(665478..667451) 1 NC_010803.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 667451 6354045 Clim_0597 Chlorobium limicola DSM 245 acetyl-CoA synthetase YP_001942663.1 665478 R 290315 CDS YP_001942664.1 189346135 6354046 complement(667647..670064) 1 NC_010803.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 670064 leuS 6354046 leuS Chlorobium limicola DSM 245 leucyl-tRNA synthetase YP_001942664.1 667647 R 290315 CDS YP_001942665.1 189346136 6354047 complement(670217..672427) 1 NC_010803.1 KEGG: cph:Cpha266_0552 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase 672427 6354047 Clim_0599 Chlorobium limicola DSM 245 polynucleotide phosphorylase/polyadenylase YP_001942665.1 670217 R 290315 CDS YP_001942666.1 189346137 6354048 complement(672567..673418) 1 NC_010803.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 673418 panC 6354048 panC Chlorobium limicola DSM 245 pantoate--beta-alanine ligase YP_001942666.1 672567 R 290315 CDS YP_001942667.1 189346138 6354049 complement(673402..674154) 1 NC_010803.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: plt:Plut_1633 hypothetical protein; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 674154 6354049 Clim_0601 Chlorobium limicola DSM 245 uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_001942667.1 673402 R 290315 CDS YP_001942668.1 189346139 6354050 674253..675236 1 NC_010803.1 KEGG: cph:Cpha266_0555 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 675236 6354050 Clim_0602 Chlorobium limicola DSM 245 oligopeptide/dipeptide ABC transporter ATPase YP_001942668.1 674253 D 290315 CDS YP_001942669.1 189346140 6354051 675302..677095 1 NC_010803.1 KEGG: cph:Cpha266_0556 Signal peptide peptidase A. Serine peptidase. MEROPS family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA, 36K type 677095 6354051 Clim_0603 Chlorobium limicola DSM 245 signal peptide peptidase SppA, 36K type YP_001942669.1 675302 D 290315 CDS YP_001942670.1 189346141 6354052 complement(677159..678565) 1 NC_010803.1 KEGG: cph:Cpha266_0557 hypothetical protein; hypothetical protein 678565 6354052 Clim_0604 Chlorobium limicola DSM 245 hypothetical protein YP_001942670.1 677159 R 290315 CDS YP_001942671.1 189346142 6354053 complement(678769..680325) 1 NC_010803.1 KEGG: cph:Cpha266_0558 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI 680325 6354053 Clim_0605 Chlorobium limicola DSM 245 Mg chelatase subunit ChlI YP_001942671.1 678769 R 290315 CDS YP_001942672.1 189346143 6354054 complement(680606..683374) 1 NC_010803.1 PFAM: phosphoenolpyruvate carboxylase; KEGG: cph:Cpha266_0559 phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 683374 6354054 Clim_0606 Chlorobium limicola DSM 245 phosphoenolpyruvate carboxylase YP_001942672.1 680606 R 290315 CDS YP_001942673.1 189346144 6354055 683634..684335 1 NC_010803.1 KEGG: cph:Cpha266_0560 photosystem P840 reaction center cytochrome c-551; photosystem P840 reaction center cytochrome c-551 684335 6354055 Clim_0607 Chlorobium limicola DSM 245 photosystem P840 reaction center cytochrome c-551 YP_001942673.1 683634 D 290315 CDS YP_001942674.1 189346145 6354056 complement(684417..684845) 1 NC_010803.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 684845 6354056 Clim_0608 Chlorobium limicola DSM 245 7-cyano-7-deazaguanine reductase YP_001942674.1 684417 R 290315 CDS YP_001942675.1 189346146 6354057 684914..685621 1 NC_010803.1 PFAM: methyltransferase small; Methyltransferase type 12; KEGG: cph:Cpha266_0562 methyltransferase type 12; type 12 methyltransferase 685621 6354057 Clim_0609 Chlorobium limicola DSM 245 type 12 methyltransferase YP_001942675.1 684914 D 290315 CDS YP_001942676.1 189346147 6354058 685623..686471 1 NC_010803.1 KEGG: cph:Cpha266_0563 hypothetical protein; hypothetical protein 686471 6354058 Clim_0610 Chlorobium limicola DSM 245 hypothetical protein YP_001942676.1 685623 D 290315 CDS YP_001942677.1 189346148 6354059 686468..687481 1 NC_010803.1 PFAM: integrase family protein; integrase; KEGG: cph:Cpha266_0564 tyrosine recombinase XerC subunit; integrase family protein 687481 6354059 Clim_0611 Chlorobium limicola DSM 245 integrase family protein YP_001942677.1 686468 D 290315 CDS YP_001942678.1 189346149 6354060 687557..687880 1 NC_010803.1 TIGRFAM: ribosomal subunit interface protein; KEGG: cph:Cpha266_0565 hypothetical protein; sigma 54 modulation protein/ribosomal protein S30EA 687880 6354060 Clim_0612 Chlorobium limicola DSM 245 sigma 54 modulation protein/ribosomal protein S30EA YP_001942678.1 687557 D 290315 CDS YP_001942679.1 189346150 6354061 687953..688945 1 NC_010803.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 688945 6354061 Clim_0613 Chlorobium limicola DSM 245 HPr kinase/phosphorylase YP_001942679.1 687953 D 290315 CDS YP_001942680.1 189346151 6354062 688932..690713 1 NC_010803.1 PFAM: extracellular solute-binding protein family 5; KEGG: cph:Cpha266_0567 extracellular solute-binding protein, family 5; family 5 extracellular solute-binding protein 690713 6354062 Clim_0614 Chlorobium limicola DSM 245 family 5 extracellular solute-binding protein YP_001942680.1 688932 D 290315 CDS YP_001942681.1 189346152 6354063 690720..691685 1 NC_010803.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: plt:Plut_1620 peptide ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein 691685 6354063 Clim_0615 Chlorobium limicola DSM 245 binding-protein-dependent transport system inner membrane protein YP_001942681.1 690720 D 290315 CDS YP_001942682.1 189346153 6354064 691722..692768 1 NC_010803.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 692768 ruvB 6354064 ruvB Chlorobium limicola DSM 245 Holliday junction DNA helicase RuvB YP_001942682.1 691722 D 290315 CDS YP_001942683.1 189346154 6354065 692752..694491 1 NC_010803.1 PFAM: hypothetical protein; Tetratricopeptide TPR_3; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: cph:Cpha266_0570 tetratricopeptide TPR_2 repeat protein; hypothetical protein 694491 6354065 Clim_0617 Chlorobium limicola DSM 245 hypothetical protein YP_001942683.1 692752 D 290315 CDS YP_001942684.1 189346155 6354066 complement(694555..698115) 1 NC_010803.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cph:Cpha266_0571 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 698115 6354066 Clim_0618 Chlorobium limicola DSM 245 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_001942684.1 694555 R 290315 CDS YP_001942685.1 189346156 6354067 698406..699152 1 NC_010803.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: cph:Cpha266_0572 RNA methyltransferase, TrmH family, group 3; TrmH family RNA methyltransferase 699152 6354067 Clim_0619 Chlorobium limicola DSM 245 TrmH family RNA methyltransferase YP_001942685.1 698406 D 290315 CDS YP_001942686.1 189346157 6354068 699276..699659 1 NC_010803.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 699659 6354068 Clim_0620 Chlorobium limicola DSM 245 glycine cleavage system protein H YP_001942686.1 699276 D 290315 CDS YP_001942687.1 189346158 6354069 699693..701024 1 NC_010803.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 701024 6354069 Clim_0621 Chlorobium limicola DSM 245 glycine dehydrogenase subunit 1 YP_001942687.1 699693 D 290315 CDS YP_001942688.1 189346159 6354070 complement(701120..702010) 1 NC_010803.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 702010 6354070 Clim_0622 Chlorobium limicola DSM 245 dihydrodipicolinate synthase YP_001942688.1 701120 R 290315 CDS YP_001942689.1 189346160 6354071 complement(702236..703942) 1 NC_010803.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: cph:Cpha266_0576 DNA repair protein RecN; DNA repair protein RecN 703942 6354071 Clim_0623 Chlorobium limicola DSM 245 DNA repair protein RecN YP_001942689.1 702236 R 290315 CDS YP_001942690.1 189346161 6354072 complement(704054..704266) 1 NC_010803.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: cph:Cpha266_0577 twin-arginine translocation protein, TatA/E family subunit; twin-arginine translocation protein, TatA/E family subunit 704266 6354072 Clim_0624 Chlorobium limicola DSM 245 twin-arginine translocation protein, TatA/E family subunit YP_001942690.1 704054 R 290315 CDS YP_001942691.1 189346162 6354073 complement(704377..705015) 1 NC_010803.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 705015 6354073 Clim_0625 Chlorobium limicola DSM 245 phosphatidylserine decarboxylase YP_001942691.1 704377 R 290315 CDS YP_001942692.1 189346163 6354074 705113..706090 1 NC_010803.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: cph:Cpha266_0579 tRNA(Ile)-lysidine synthetase; tRNA(Ile)-lysidine synthetase 706090 6354074 Clim_0626 Chlorobium limicola DSM 245 tRNA(Ile)-lysidine synthetase YP_001942692.1 705113 D 290315 CDS YP_001942693.1 189346164 6354075 complement(706099..707133) 1 NC_010803.1 KEGG: cph:Cpha266_0580 hypothetical protein; hypothetical protein 707133 6354075 Clim_0627 Chlorobium limicola DSM 245 hypothetical protein YP_001942693.1 706099 R 290315 CDS YP_001942694.1 189346165 6354076 complement(707145..707585) 1 NC_010803.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 707585 rnhA 6354076 rnhA Chlorobium limicola DSM 245 ribonuclease H YP_001942694.1 707145 R 290315 CDS YP_001942695.1 189346166 6354077 complement(707657..707875) 1 NC_010803.1 required for 70S ribosome assembly; 50S ribosomal protein L28 707875 rpmB 6354077 rpmB Chlorobium limicola DSM 245 50S ribosomal protein L28 YP_001942695.1 707657 R 290315 CDS YP_001942696.1 189346167 6354078 complement(707970..708962) 1 NC_010803.1 TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: cph:Cpha266_0583 bacteriochlorophyll/chlorophyll a synthase; bacteriochlorophyll/chlorophyll a synthase 708962 6354078 Clim_0630 Chlorobium limicola DSM 245 bacteriochlorophyll/chlorophyll a synthase YP_001942696.1 707970 R 290315 CDS YP_001942697.1 189346168 6354079 complement(709041..710096) 1 NC_010803.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 710096 trpD 6354079 trpD Chlorobium limicola DSM 245 anthranilate phosphoribosyltransferase YP_001942697.1 709041 R 290315 CDS YP_001942698.1 189346169 6354080 710216..711310 1 NC_010803.1 PFAM: creatinase; peptidase M24; KEGG: cph:Cpha266_0585 peptidase M24; peptidase M24 711310 6354080 Clim_0632 Chlorobium limicola DSM 245 peptidase M24 YP_001942698.1 710216 D 290315 CDS YP_001942699.1 189346170 6354081 711366..711698 1 NC_010803.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: cph:Cpha266_0586 CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein 711698 6354081 Clim_0633 Chlorobium limicola DSM 245 CutA1 divalent ion tolerance protein YP_001942699.1 711366 D 290315 CDS YP_001942700.1 189346171 6354082 complement(711757..712653) 1 NC_010803.1 KEGG: cph:Cpha266_0688 hypothetical protein; hypothetical protein 712653 6354082 Clim_0634 Chlorobium limicola DSM 245 hypothetical protein YP_001942700.1 711757 R 290315 CDS YP_001942701.1 189346172 6354083 complement(712640..713572) 1 NC_010803.1 PFAM: glycosyl transferase family 2; KEGG: cph:Cpha266_0689 glycosyl transferase, family 2; family 2 glycosyl transferase 713572 6354083 Clim_0635 Chlorobium limicola DSM 245 family 2 glycosyl transferase YP_001942701.1 712640 R 290315 CDS YP_001942702.1 189346173 6354084 complement(713569..715131) 1 NC_010803.1 PFAM: glycosyl transferase family 39; KEGG: cph:Cpha266_0690 glycosyl transferase, family 39; glycosyl transferase family protein 715131 6354084 Clim_0636 Chlorobium limicola DSM 245 glycosyl transferase family protein YP_001942702.1 713569 R 290315 CDS YP_001942703.1 189346174 6354085 complement(715103..715729) 1 NC_010803.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: cph:Cpha266_0691 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 715729 6354085 Clim_0637 Chlorobium limicola DSM 245 PA-phosphatase-like phosphoesterase YP_001942703.1 715103 R 290315 CDS YP_001942704.1 189346175 6354086 715894..716757 1 NC_010803.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 716757 purU 6354086 purU Chlorobium limicola DSM 245 formyltetrahydrofolate deformylase YP_001942704.1 715894 D 290315 CDS YP_001942705.1 189346176 6354087 716933..717451 1 NC_010803.1 PFAM: Lipocalin-related protein and Bos/Can/Equ allergen; Lipocalin family protein; KEGG: pvi:Cvib_0516 lipocalin family protein; lipocalin family protein 717451 6354087 Clim_0639 Chlorobium limicola DSM 245 lipocalin family protein YP_001942705.1 716933 D 290315 CDS YP_001942706.1 189346177 6354088 717498..717659 1 NC_010803.1 hypothetical protein 717659 6354088 Clim_0640 Chlorobium limicola DSM 245 hypothetical protein YP_001942706.1 717498 D 290315 CDS YP_001942707.1 189346178 6354089 717784..719037 1 NC_010803.1 PFAM: hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: aci:ACIAD0355 hypothetical protein; hypothetical protein 719037 6354089 Clim_0641 Chlorobium limicola DSM 245 hypothetical protein YP_001942707.1 717784 D 290315 CDS YP_001942708.1 189346179 6354090 719141..719713 1 NC_010803.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: gme:Gmet_1443 flavin reductase-like, FMN-binding; flavin reductase domain-containing protein 719713 6354090 Clim_0642 Chlorobium limicola DSM 245 flavin reductase domain-containing protein YP_001942708.1 719141 D 290315 CDS YP_001942709.1 189346180 6354091 720193..720375 1 NC_010803.1 KEGG: gur:Gura_2094 hypothetical protein; hypothetical protein 720375 6354091 Clim_0643 Chlorobium limicola DSM 245 hypothetical protein YP_001942709.1 720193 D 290315 CDS YP_001942710.1 189346181 6354092 720477..720617 1 NC_010803.1 KEGG: gme:Gmet_1443 flavin reductase-like, FMN-binding; flavin reductase-like, FMN-binding 720617 6354092 Clim_0644 Chlorobium limicola DSM 245 flavin reductase-like, FMN-binding YP_001942710.1 720477 D 290315 CDS YP_001942711.1 189346182 6354093 721160..721924 1 NC_010803.1 KEGG: cph:Cpha266_2523 type II site-specific deoxyribonuclease; type II site-specific deoxyribonuclease 721924 6354093 Clim_0645 Chlorobium limicola DSM 245 type II site-specific deoxyribonuclease YP_001942711.1 721160 D 290315 CDS YP_001942712.1 189346183 6354094 complement(721905..723011) 1 NC_010803.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: cph:Cpha266_2524 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 723011 6354094 Clim_0646 Chlorobium limicola DSM 245 DNA methylase N-4/N-6 domain-containing protein YP_001942712.1 721905 R 290315 CDS YP_001942713.1 189346184 6354262 723526..723996 1 NC_010803.1 KEGG: ade:Adeh_3278 hypothetical protein; hypothetical protein 723996 6354262 Clim_0648 Chlorobium limicola DSM 245 hypothetical protein YP_001942713.1 723526 D 290315 CDS YP_001942714.1 189346185 6354263 724134..724712 1 NC_010803.1 hypothetical protein 724712 6354263 Clim_0649 Chlorobium limicola DSM 245 hypothetical protein YP_001942714.1 724134 D 290315 CDS YP_001942715.1 189346186 6354265 725657..726034 1 NC_010803.1 KEGG: ppr:PBPRB1764 hypothetical protein; hypothetical protein 726034 6354265 Clim_0651 Chlorobium limicola DSM 245 hypothetical protein YP_001942715.1 725657 D 290315 CDS YP_001942716.1 189346187 6354266 726207..727217 1 NC_010803.1 KEGG: aav:Aave_0556 hypothetical protein; hypothetical protein 727217 6354266 Clim_0652 Chlorobium limicola DSM 245 hypothetical protein YP_001942716.1 726207 D 290315 CDS YP_001942717.1 189346188 6354267 727498..728355 1 NC_010803.1 KEGG: hch:HCH_04427 hypothetical protein; hypothetical protein 728355 6354267 Clim_0653 Chlorobium limicola DSM 245 hypothetical protein YP_001942717.1 727498 D 290315 CDS YP_001942718.1 189346189 6354268 728490..729395 1 NC_010803.1 KEGG: psp:PSPPH_4543 hypothetical protein; hypothetical protein 729395 6354268 Clim_0654 Chlorobium limicola DSM 245 hypothetical protein YP_001942718.1 728490 D 290315 CDS YP_001942719.1 189346190 6354269 complement(729950..730234) 1 NC_010803.1 KEGG: cch:Cag_1578 hypothetical protein; hypothetical protein 730234 6354269 Clim_0655 Chlorobium limicola DSM 245 hypothetical protein YP_001942719.1 729950 R 290315 CDS YP_001942720.1 189346191 6354270 complement(730234..730569) 1 NC_010803.1 PFAM: protein of unknown function DUF891; KEGG: plt:Plut_0606 hypothetical protein; hypothetical protein 730569 6354270 Clim_0656 Chlorobium limicola DSM 245 hypothetical protein YP_001942720.1 730234 R 290315 CDS YP_001942721.1 189346192 6354272 complement(731102..731557) 1 NC_010803.1 PFAM: twitching mobility protein PilT; KEGG: swo:Swol_1837 PilT protein-like protein; twitching mobility protein PilT 731557 6354272 Clim_0658 Chlorobium limicola DSM 245 twitching mobility protein PilT YP_001942721.1 731102 R 290315 CDS YP_001942722.1 189346193 6354273 complement(731545..731715) 1 NC_010803.1 hypothetical protein 731715 6354273 Clim_0659 Chlorobium limicola DSM 245 hypothetical protein YP_001942722.1 731545 R 290315 CDS YP_001942723.1 189346194 6354274 731853..732188 1 NC_010803.1 PFAM: protein of unknown function DUF486; KEGG: gsu:GSU1275 hypothetical protein; hypothetical protein 732188 6354274 Clim_0660 Chlorobium limicola DSM 245 hypothetical protein YP_001942723.1 731853 D 290315 CDS YP_001942724.1 189346195 6354275 complement(732222..733943) 1 NC_010803.1 KEGG: cph:Cpha266_0697 ABC transporter, transmembrane region, type 1; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter; SMART: AAA ATPase; cysteine ABC transporter permease/ATP-binding protein CydC 733943 6354275 Clim_0661 Chlorobium limicola DSM 245 cysteine ABC transporter permease/ATP-binding protein CydC YP_001942724.1 732222 R 290315 CDS YP_001942725.1 189346196 6354277 complement(736371..737132) 1 NC_010803.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: cch:Cag_1270 thiamine biosynthesis protein ThiF; UBA/THIF-type NAD/FAD binding protein 737132 6354277 Clim_0663 Chlorobium limicola DSM 245 UBA/THIF-type NAD/FAD binding protein YP_001942725.1 736371 R 290315 CDS YP_001942726.1 189346197 6354278 complement(737153..738220) 1 NC_010803.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; thiamine biosynthesis protein ThiH 738220 thiH 6354278 thiH Chlorobium limicola DSM 245 thiamine biosynthesis protein ThiH YP_001942726.1 737153 R 290315 CDS YP_001942727.1 189346198 6354279 complement(738217..738996) 1 NC_010803.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 738996 thiG 6354279 thiG Chlorobium limicola DSM 245 thiazole synthase YP_001942727.1 738217 R 290315 CDS YP_001942728.1 189346199 6354280 complement(739015..739227) 1 NC_010803.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: cph:Cpha266_0731 thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS 739227 6354280 Clim_0666 Chlorobium limicola DSM 245 thiamine biosynthesis protein ThiS YP_001942728.1 739015 R 290315 CDS YP_001942729.1 189346200 6354281 complement(739367..740512) 1 NC_010803.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: cph:Cpha266_0732 cystathionine gamma-synthase; cystathionine gamma-synthase 740512 6354281 Clim_0667 Chlorobium limicola DSM 245 cystathionine gamma-synthase YP_001942729.1 739367 R 290315 CDS YP_001942730.1 189346201 6354282 complement(740570..741859) 1 NC_010803.1 KEGG: plt:Plut_1549 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine/O-acetylserine sulfhydrylase 741859 6354282 Clim_0668 Chlorobium limicola DSM 245 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_001942730.1 740570 R 290315 CDS YP_001942731.1 189346202 6354283 complement(741939..742385) 1 NC_010803.1 KEGG: plt:Plut_1546 hypothetical protein; hypothetical protein 742385 6354283 Clim_0669 Chlorobium limicola DSM 245 hypothetical protein YP_001942731.1 741939 R 290315 CDS YP_001942732.1 189346203 6354284 742469..742621 1 NC_010803.1 hypothetical protein 742621 6354284 Clim_0670 Chlorobium limicola DSM 245 hypothetical protein YP_001942732.1 742469 D 290315 CDS YP_001942733.1 189346204 6354285 742775..743209 1 NC_010803.1 PFAM: MOSC domain containing protein; KEGG: cph:Cpha266_0733 MOSC domain containing protein; MOSC domain-containing protein 743209 6354285 Clim_0671 Chlorobium limicola DSM 245 MOSC domain-containing protein YP_001942733.1 742775 D 290315 CDS YP_001942734.1 189346205 6354286 complement(743215..744213) 1 NC_010803.1 KEGG: cph:Cpha266_0734 GTP cyclohydrolase subunit MoaA; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 744213 6354286 Clim_0672 Chlorobium limicola DSM 245 molybdenum cofactor biosynthesis protein A YP_001942734.1 743215 R 290315 CDS YP_001942735.1 189346206 6354287 complement(744305..745117) 1 NC_010803.1 TIGRFAM: molybdate transport repressor, ModE; PFAM: regulatory protein LysR; TOBE domain protein; KEGG: cph:Cpha266_0735 ModE family transcriptional regulator; ModE family transcriptional regulator 745117 6354287 Clim_0673 Chlorobium limicola DSM 245 ModE family transcriptional regulator YP_001942735.1 744305 R 290315 CDS YP_001942736.1 189346207 6354288 complement(745172..745879) 1 NC_010803.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: plt:Plut_1542 transmembrane protein; binding-protein-dependent transport system inner membrane protein 745879 6354288 Clim_0674 Chlorobium limicola DSM 245 binding-protein-dependent transport system inner membrane protein YP_001942736.1 745172 R 290315 CDS YP_001942737.1 189346208 6354289 complement(745876..746604) 1 NC_010803.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: cph:Cpha266_0441 molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 746604 6354289 Clim_0675 Chlorobium limicola DSM 245 molybdenum ABC transporter periplasmic molybdate-binding protein YP_001942737.1 745876 R 290315 CDS YP_001942738.1 189346209 6354290 complement(746701..748971) 1 NC_010803.1 PFAM: TonB-dependent receptor; KEGG: cph:Cpha266_0440 TonB-dependent receptor; TonB-dependent receptor 748971 6354290 Clim_0676 Chlorobium limicola DSM 245 TonB-dependent receptor YP_001942738.1 746701 R 290315 CDS YP_001942739.1 189346210 6354291 complement(749110..749418) 1 NC_010803.1 KEGG: cte:CT1541 ferredoxin, 2Fe-2S; ferredoxin, 2Fe-2S 749418 6354291 Clim_0677 Chlorobium limicola DSM 245 ferredoxin, 2Fe-2S YP_001942739.1 749110 R 290315 CDS YP_001942740.1 189346211 6354292 complement(749499..750773) 1 NC_010803.1 KEGG: cph:Cpha266_0737 nitrogenase cofactor biosynthesis protein NifB; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; nitrogenase cofactor biosynthesis protein NifB 750773 6354292 Clim_0678 Chlorobium limicola DSM 245 nitrogenase cofactor biosynthesis protein NifB YP_001942740.1 749499 R 290315 CDS YP_001942741.1 189346212 6354293 complement(750787..752142) 1 NC_010803.1 PFAM: oxidoreductase/nitrogenase component 1; KEGG: cph:Cpha266_0738 nitrogenase; nitrogenase 752142 6354293 Clim_0679 Chlorobium limicola DSM 245 nitrogenase YP_001942741.1 750787 R 290315 CDS YP_001942742.1 189346213 6354294 complement(752139..753506) 1 NC_010803.1 KEGG: plt:Plut_1533 nitrogenase MoFe cofactor biosynthesis protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase MoFe cofactor biosynthesis protein NifE 753506 6354294 Clim_0680 Chlorobium limicola DSM 245 nitrogenase MoFe cofactor biosynthesis protein NifE YP_001942742.1 752139 R 290315 CDS YP_001942743.1 189346214 6354295 complement(753611..754990) 1 NC_010803.1 KEGG: cph:Cpha266_0740 nitrogenase molybdenum-iron protein beta chain; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit beta 754990 6354295 Clim_0681 Chlorobium limicola DSM 245 nitrogenase molybdenum-iron protein subunit beta YP_001942743.1 753611 R 290315 CDS YP_001942744.1 189346215 6354296 complement(755017..756657) 1 NC_010803.1 KEGG: cph:Cpha266_0741 nitrogenase molybdenum-iron protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit alpha 756657 6354296 Clim_0682 Chlorobium limicola DSM 245 nitrogenase molybdenum-iron protein subunit alpha YP_001942744.1 755017 R 290315 CDS YP_001942745.1 189346216 6354297 complement(756695..757072) 1 NC_010803.1 PFAM: nitrogen regulatory protein P-II; KEGG: cte:CT1535 nitrogen regulatory protein, P-II family; nitrogen regulatory protein P-II 757072 6354297 Clim_0683 Chlorobium limicola DSM 245 nitrogen regulatory protein P-II YP_001942745.1 756695 R 290315 CDS YP_001942746.1 189346217 6354298 complement(757072..757425) 1 NC_010803.1 PFAM: nitrogen regulatory protein P-II; KEGG: cte:CT1534 nitrogen regulatory protein, P-II family; nitrogen regulatory protein P-II 757425 6354298 Clim_0684 Chlorobium limicola DSM 245 nitrogen regulatory protein P-II YP_001942746.1 757072 R 290315 CDS YP_001942747.1 189346218 6354299 complement(757444..758268) 1 NC_010803.1 nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; nitrogenase reductase 758268 nifH 6354299 nifH Chlorobium limicola DSM 245 nitrogenase reductase YP_001942747.1 757444 R 290315 CDS YP_001942748.1 189346219 6354300 758632..759240 1 NC_010803.1 hypothetical protein 759240 6354300 Clim_0686 Chlorobium limicola DSM 245 hypothetical protein YP_001942748.1 758632 D 290315 CDS YP_001942749.1 189346220 6354301 759287..760246 1 NC_010803.1 PFAM: aldo/keto reductase; KEGG: cch:Cag_1232 aldo/keto reductase; aldo/keto reductase 760246 6354301 Clim_0687 Chlorobium limicola DSM 245 aldo/keto reductase YP_001942749.1 759287 D 290315 CDS YP_001942750.1 189346221 6354302 complement(760285..762360) 1 NC_010803.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator; histidine kinase 762360 6354302 Clim_0688 Chlorobium limicola DSM 245 histidine kinase YP_001942750.1 760285 R 290315 CDS YP_001942751.1 189346222 6354303 complement(762561..764195) 1 NC_010803.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: cph:Cpha266_1919 DNA-binding protein fis / Fis family transcriptional regulator; hypothetical protein 764195 6354303 Clim_0689 Chlorobium limicola DSM 245 hypothetical protein YP_001942751.1 762561 R 290315 CDS YP_001942752.1 189346223 6354304 complement(764201..765370) 1 NC_010803.1 TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase; KEGG: cph:Cpha266_1918 homocitrate synthase; homocitrate synthase 765370 6354304 Clim_0690 Chlorobium limicola DSM 245 homocitrate synthase YP_001942752.1 764201 R 290315 CDS YP_001942753.1 189346224 6354305 765890..766366 1 NC_010803.1 PFAM: Rhodanese domain protein; KEGG: cph:Cpha266_0124 rhodanese domain protein; rhodanese domain-containing protein 766366 6354305 Clim_0691 Chlorobium limicola DSM 245 rhodanese domain-containing protein YP_001942753.1 765890 D 290315 CDS YP_001942754.1 189346225 6354306 766495..767892 1 NC_010803.1 TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: cph:Cpha266_0126 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 767892 6354306 Clim_0692 Chlorobium limicola DSM 245 cobyrinic acid a,c-diamide synthase YP_001942754.1 766495 D 290315 CDS YP_001942755.1 189346226 6354307 768269..768604 1 NC_010803.1 TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein; KEGG: plt:Plut_0035 sulfite reductase, dissimilatory-type, gamma subunit; TusE/DsrC/DsvC family sulfur relay protein 768604 6354307 Clim_0693 Chlorobium limicola DSM 245 TusE/DsrC/DsvC family sulfur relay protein YP_001942755.1 768269 D 290315 CDS YP_001942756.1 189346227 6354308 768660..769913 1 NC_010803.1 KEGG: cph:Cpha266_0128 sulfite reductase, dissimilatory-type alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; sulfite reductase, dissimilatory-type subunit alpha 769913 6354308 Clim_0694 Chlorobium limicola DSM 245 sulfite reductase, dissimilatory-type subunit alpha YP_001942756.1 768660 D 290315 CDS YP_001942757.1 189346228 6354309 769997..771076 1 NC_010803.1 KEGG: cph:Cpha266_0129 sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; sulfite reductase, dissimilatory-type subunit beta 771076 6354309 Clim_0695 Chlorobium limicola DSM 245 sulfite reductase, dissimilatory-type subunit beta YP_001942757.1 769997 D 290315 CDS YP_001942758.1 189346229 6354310 771095..772828 1 NC_010803.1 unknown function; glutamate synthase (NADPH) small subunit 772828 6354310 Clim_0696 Chlorobium limicola DSM 245 glutamate synthase (NADPH) small subunit YP_001942758.1 771095 D 290315 CDS YP_001942759.1 189346230 6354311 772818..773216 1 NC_010803.1 KEGG: cfa:610889 similar to collagen, type XXV, alpha 1 isoform 1; collagen, type XXV, alpha 1 isoform 1-like protein 773216 6354311 Clim_0697 Chlorobium limicola DSM 245 collagen, type XXV, alpha 1 isoform 1-like protein YP_001942759.1 772818 D 290315 CDS YP_001942760.1 189346231 6354312 773300..773671 1 NC_010803.1 KEGG: cph:Cpha266_0131 hypothetical protein; hypothetical protein 773671 6354312 Clim_0698 Chlorobium limicola DSM 245 hypothetical protein YP_001942760.1 773300 D 290315 CDS YP_001942761.1 189346232 6354313 773722..774081 1 NC_010803.1 TIGRFAM: sulfur relay protein TusD/DsrE; PFAM: DsrE family protein; KEGG: cch:Cag_1952 DsrE protein; sulfur relay protein TusD/DsrE 774081 6354313 Clim_0699 Chlorobium limicola DSM 245 sulfur relay protein TusD/DsrE YP_001942761.1 773722 D 290315 CDS YP_001942762.1 189346233 6354314 774089..774460 1 NC_010803.1 TIGRFAM: sulfur relay protein TusC/DsrF; PFAM: DsrE family protein; KEGG: cch:Cag_1951 DsrF protein; sulfur relay protein TusC/DsrF 774460 6354314 Clim_0700 Chlorobium limicola DSM 245 sulfur relay protein TusC/DsrF YP_001942762.1 774089 D 290315 CDS YP_001942763.1 189346234 6354315 774477..774770 1 NC_010803.1 TIGRFAM: sulfur relay protein TusB/DsrH; PFAM: DsrH family protein; KEGG: cte:CT0857 DsrH protein; sulfur relay protein TusB/DsrH 774770 6354315 Clim_0701 Chlorobium limicola DSM 245 sulfur relay protein TusB/DsrH YP_001942763.1 774477 D 290315 CDS YP_001942764.1 189346235 6354316 774812..775258 1 NC_010803.1 KEGG: cph:Cpha266_0135 hypothetical protein; hypothetical protein 775258 6354316 Clim_0702 Chlorobium limicola DSM 245 hypothetical protein YP_001942764.1 774812 D 290315 CDS YP_001942765.1 189346236 6354317 775255..776250 1 NC_010803.1 PFAM: Nitrate reductase gamma subunit; KEGG: cph:Cpha266_0136 nitrate reductase, gamma subunit; nitrate reductase subunit gamma 776250 6354317 Clim_0703 Chlorobium limicola DSM 245 nitrate reductase subunit gamma YP_001942765.1 775255 D 290315 CDS YP_001942766.1 189346237 6354318 776253..777902 1 NC_010803.1 KEGG: cph:Cpha266_0137 DsrK protein; DsrK protein 777902 6354318 Clim_0704 Chlorobium limicola DSM 245 DsrK protein YP_001942766.1 776253 D 290315 CDS YP_001942767.1 189346238 6354319 777910..778275 1 NC_010803.1 KEGG: cph:Cpha266_0138 hypothetical protein; hypothetical protein 778275 6354319 Clim_0705 Chlorobium limicola DSM 245 hypothetical protein YP_001942767.1 777910 D 290315 CDS YP_001942768.1 189346239 6354320 778275..779051 1 NC_010803.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cph:Cpha266_0139 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 779051 6354320 Clim_0706 Chlorobium limicola DSM 245 4Fe-4S ferredoxin YP_001942768.1 778275 D 290315 CDS YP_001942769.1 189346240 6354321 779061..780218 1 NC_010803.1 PFAM: Polysulphide reductase NrfD; KEGG: cph:Cpha266_0140 polysulphide reductase, NrfD; polysulfide reductase NrfD 780218 6354321 Clim_0707 Chlorobium limicola DSM 245 polysulfide reductase NrfD YP_001942769.1 779061 D 290315 CDS YP_001942770.1 189346241 6354322 780355..780816 1 NC_010803.1 TIGRFAM: siroheme synthase; KEGG: cte:CT2239 porphyrin biosynthesis protein; siroheme synthase 780816 6354322 Clim_0708 Chlorobium limicola DSM 245 siroheme synthase YP_001942770.1 780355 D 290315 CDS YP_001942771.1 189346242 6354323 780837..782213 1 NC_010803.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: cph:Cpha266_0142 uroporphyrinogen-III C-methyltransferase; uroporphyrin-III C-methyltransferase 782213 6354323 Clim_0709 Chlorobium limicola DSM 245 uroporphyrin-III C-methyltransferase YP_001942771.1 780837 D 290315 CDS YP_001942772.1 189346243 6354324 complement(782266..785064) 1 NC_010803.1 KEGG: cch:Cag_1875 TPR repeat; TIGRFAM: pentatricopeptide repeat containing protein; PFAM: hypothetical protein; transcriptional regulator TrmB; SMART: AAA ATPase; Tetratricopeptide domain protein; pentatricopeptide repeat-containing protein 785064 6354324 Clim_0710 Chlorobium limicola DSM 245 pentatricopeptide repeat-containing protein YP_001942772.1 782266 R 290315 CDS YP_001942773.1 189346244 6354325 complement(785068..786306) 1 NC_010803.1 KEGG: gvi:gll1120 unknown protein; hypothetical protein 786306 6354325 Clim_0711 Chlorobium limicola DSM 245 hypothetical protein YP_001942773.1 785068 R 290315 CDS YP_001942774.1 189346245 6354326 786595..786771 1 NC_010803.1 hypothetical protein 786771 6354326 Clim_0712 Chlorobium limicola DSM 245 hypothetical protein YP_001942774.1 786595 D 290315 CDS YP_001942775.1 189346246 6354327 complement(786735..787259) 1 NC_010803.1 hypothetical protein 787259 6354327 Clim_0713 Chlorobium limicola DSM 245 hypothetical protein YP_001942775.1 786735 R 290315 CDS YP_001942776.1 189346247 6354328 complement(788015..788455) 1 NC_010803.1 hypothetical protein 788455 6354328 Clim_0714 Chlorobium limicola DSM 245 hypothetical protein YP_001942776.1 788015 R 290315 CDS YP_001942777.1 189346248 6354329 788868..789011 1 NC_010803.1 hypothetical protein 789011 6354329 Clim_0715 Chlorobium limicola DSM 245 hypothetical protein YP_001942777.1 788868 D 290315 CDS YP_001942778.1 189346249 6354330 789106..790680 1 NC_010803.1 PFAM: Integrase catalytic region; KEGG: cph:Cpha266_2658 integrase, catalytic region; integrase catalytic subunit 790680 6354330 Clim_0716 Chlorobium limicola DSM 245 integrase catalytic subunit YP_001942778.1 789106 D 290315 CDS YP_001942779.1 189346250 6355998 790683..791495 1 NC_010803.1 PFAM: IstB domain protein ATP-binding protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: cph:Cpha266_2659 IstB domain protein ATP-binding protein; IstB domain-containing protein ATP-binding protein 791495 6355998 Clim_0717 Chlorobium limicola DSM 245 IstB domain-containing protein ATP-binding protein YP_001942779.1 790683 D 290315 CDS YP_001942780.1 189346251 6356000 791832..792077 1 NC_010803.1 KEGG: cph:Cpha266_1578 protein of unknown function DUF1568; hypothetical protein 792077 6356000 Clim_0719 Chlorobium limicola DSM 245 hypothetical protein YP_001942780.1 791832 D 290315 CDS YP_001942781.1 189346252 6356001 792193..792429 1 NC_010803.1 KEGG: tbd:Tbd_0449 hypothetical protein; hypothetical protein 792429 6356001 Clim_0720 Chlorobium limicola DSM 245 hypothetical protein YP_001942781.1 792193 D 290315 CDS YP_001942782.1 189346253 6356002 792433..792642 1 NC_010803.1 KEGG: cph:Cpha266_2116 hypothetical protein; hypothetical protein 792642 6356002 Clim_0721 Chlorobium limicola DSM 245 hypothetical protein YP_001942782.1 792433 D 290315 CDS YP_001942783.1 189346254 6356003 792773..793738 1 NC_010803.1 PFAM: protein of unknown function DUF1568; KEGG: cph:Cpha266_1427 protein of unknown function DUF1568; hypothetical protein 793738 6356003 Clim_0722 Chlorobium limicola DSM 245 hypothetical protein YP_001942783.1 792773 D 290315 CDS YP_001942784.1 189346255 6356005 794889..795320 1 NC_010803.1 PFAM: thiol-disulphide oxidoreductase DCC; KEGG: cph:Cpha266_2114 thiol-disulphide oxidoreductase DCC; thiol-disulfide oxidoreductase DCC 795320 6356005 Clim_0724 Chlorobium limicola DSM 245 thiol-disulfide oxidoreductase DCC YP_001942784.1 794889 D 290315 CDS YP_001942785.1 189346256 6356006 795701..796642 1 NC_010803.1 PFAM: RNA methylase; Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: cph:Cpha266_2109 methyltransferase type 11; type 11 methyltransferase 796642 6356006 Clim_0725 Chlorobium limicola DSM 245 type 11 methyltransferase YP_001942785.1 795701 D 290315 CDS YP_001942786.1 189346257 6356007 complement(796753..797034) 1 NC_010803.1 TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: plasmid stabilization system; Addiction module toxin Txe/YoeB; KEGG: plt:Plut_1930 addiction module toxin, Txe/YoeB; Txe/YoeB family addiction module toxin 797034 6356007 Clim_0726 Chlorobium limicola DSM 245 Txe/YoeB family addiction module toxin YP_001942786.1 796753 R 290315 CDS YP_001942787.1 189346258 6356008 complement(797016..797273) 1 NC_010803.1 KEGG: cch:Cag_0601 hypothetical protein; hypothetical protein 797273 6356008 Clim_0727 Chlorobium limicola DSM 245 hypothetical protein YP_001942787.1 797016 R 290315 CDS YP_001942788.1 189346259 6356009 complement(798003..798659) 1 NC_010803.1 KEGG: plt:Plut_0829 Legionella vir region protein; vir region protein-like protein 798659 6356009 Clim_0728 Chlorobium limicola DSM 245 vir region protein-like protein YP_001942788.1 798003 R 290315 CDS YP_001942789.1 189346260 6356010 798931..799140 1 NC_010803.1 hypothetical protein 799140 6356010 Clim_0729 Chlorobium limicola DSM 245 hypothetical protein YP_001942789.1 798931 D 290315 CDS YP_001942790.1 189346261 6356011 complement(799167..799406) 1 NC_010803.1 PFAM: transglycosylase; KEGG: cph:Cpha266_1988 transglycosylase-associated protein; transglycosylase 799406 6356011 Clim_0730 Chlorobium limicola DSM 245 transglycosylase YP_001942790.1 799167 R 290315 CDS YP_001942791.1 189346262 6356012 complement(799699..800556) 1 NC_010803.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: cph:Cpha266_1744 transglutaminase, N-terminal domain protein; transglutaminase domain-containing protein 800556 6356012 Clim_0731 Chlorobium limicola DSM 245 transglutaminase domain-containing protein YP_001942791.1 799699 R 290315 CDS YP_001942792.1 189346263 6356013 complement(800613..801680) 1 NC_010803.1 PFAM: protein of unknown function DUF403; KEGG: cph:Cpha266_1743 protein of unknown function DUF403; hypothetical protein 801680 6356013 Clim_0732 Chlorobium limicola DSM 245 hypothetical protein YP_001942792.1 800613 R 290315 CDS YP_001942793.1 189346264 6356014 complement(801700..803148) 1 NC_010803.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: cph:Cpha266_1742 protein of unknown function DUF404; hypothetical protein 803148 6356014 Clim_0733 Chlorobium limicola DSM 245 hypothetical protein YP_001942793.1 801700 R 290315 CDS YP_001942794.1 189346265 6356015 803508..804851 1 NC_010803.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: cph:Cpha266_1073 NADH dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 804851 6356015 Clim_0734 Chlorobium limicola DSM 245 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001942794.1 803508 D 290315 CDS YP_001942795.1 189346266 6356016 complement(804877..806478) 1 NC_010803.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: cph:Cpha266_0846 alpha-isopropylmalate/homocitrate synthase family transferase; alpha-isopropylmalate/homocitrate synthase family transferase 806478 6356016 Clim_0735 Chlorobium limicola DSM 245 alpha-isopropylmalate/homocitrate synthase family transferase YP_001942795.1 804877 R 290315 CDS YP_001942796.1 189346267 6356017 complement(806492..807058) 1 NC_010803.1 TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: cph:Cpha266_0847 3-isopropylmalate dehydratase, small subunit; 3-isopropylmalate dehydratase small subunit 807058 6356017 Clim_0736 Chlorobium limicola DSM 245 3-isopropylmalate dehydratase small subunit YP_001942796.1 806492 R 290315 CDS YP_001942797.1 189346268 6356018 complement(807097..808392) 1 NC_010803.1 KEGG: cph:Cpha266_0848 homoaconitate hydratase family protein; TIGRFAM: homoaconitate hydratase family protein; 3-isopropylmalate dehydratase; PFAM: aconitate hydratase domain protein; homoaconitate hydratase family protein 808392 6356018 Clim_0737 Chlorobium limicola DSM 245 homoaconitate hydratase family protein YP_001942797.1 807097 R 290315 CDS YP_001942798.1 189346269 6356019 complement(808440..809516) 1 NC_010803.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 809516 6356019 Clim_0738 Chlorobium limicola DSM 245 3-isopropylmalate dehydrogenase YP_001942798.1 808440 R 290315 CDS YP_001942799.1 189346270 6356020 complement(809516..810508) 1 NC_010803.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 810508 6356020 Clim_0739 Chlorobium limicola DSM 245 ketol-acid reductoisomerase YP_001942799.1 809516 R 290315 CDS YP_001942800.1 189346271 6356021 complement(810551..811030) 1 NC_010803.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 811030 ilvH 6356021 ilvH Chlorobium limicola DSM 245 acetolactate synthase 3 regulatory subunit YP_001942800.1 810551 R 290315 CDS YP_001942801.1 189346272 6356022 complement(811041..812762) 1 NC_010803.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: cph:Cpha266_0853 acetolactate synthase, large subunit; acetolactate synthase large subunit 812762 6356022 Clim_0741 Chlorobium limicola DSM 245 acetolactate synthase large subunit YP_001942801.1 811041 R 290315 CDS YP_001942802.1 189346273 6356023 complement(812770..814467) 1 NC_010803.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 814467 6356023 Clim_0742 Chlorobium limicola DSM 245 dihydroxy-acid dehydratase YP_001942802.1 812770 R 290315 CDS YP_001942803.1 189346274 6356024 814982..816559 1 NC_010803.1 PFAM: phosphatidate cytidylyltransferase; protein of unknown function DUF92 transmembrane; KEGG: cph:Cpha266_0855 protein of unknown function DUF92, transmembrane; hypothetical protein 816559 6356024 Clim_0743 Chlorobium limicola DSM 245 hypothetical protein YP_001942803.1 814982 D 290315 CDS YP_001942804.1 189346275 6356025 816583..817260 1 NC_010803.1 TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: cph:Cpha266_0856 MotA/TolQ/ExbB proton channel; protein TolQ 817260 6356025 Clim_0744 Chlorobium limicola DSM 245 protein TolQ YP_001942804.1 816583 D 290315 CDS YP_001942805.1 189346276 6356026 817257..817679 1 NC_010803.1 TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: plt:Plut_0612 ExbD/TolR family protein; protein TolR 817679 6356026 Clim_0745 Chlorobium limicola DSM 245 protein TolR YP_001942805.1 817257 D 290315 CDS YP_001942806.1 189346277 6356027 817689..818639 1 NC_010803.1 TIGRFAM: TonB family protein; KEGG: cph:Cpha266_0858 Fis family transcriptional regulator; TonB family protein 818639 6356027 Clim_0746 Chlorobium limicola DSM 245 TonB family protein YP_001942806.1 817689 D 290315 CDS YP_001942807.1 189346278 6356028 818838..820172 1 NC_010803.1 TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain protein; WD40 domain protein beta Propeller; KEGG: cph:Cpha266_0859 WD40 domain protein beta propeller; Tol-Pal system beta propeller repeat-containing protein TolB 820172 6356028 Clim_0747 Chlorobium limicola DSM 245 Tol-Pal system beta propeller repeat-containing protein TolB YP_001942807.1 818838 D 290315 CDS YP_001942808.1 189346279 6356029 820208..820669 1 NC_010803.1 TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: cph:Cpha266_0860 OmpA/MotB domain protein; peptidoglycan-associated lipoprotein 820669 6356029 Clim_0748 Chlorobium limicola DSM 245 peptidoglycan-associated lipoprotein YP_001942808.1 820208 D 290315 CDS YP_001942809.1 189346280 6356030 820755..821264 1 NC_010803.1 TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: plt:Plut_0616 peptidoglycan-associated lipoprotein; peptidoglycan-associated lipoprotein 821264 6356030 Clim_0749 Chlorobium limicola DSM 245 peptidoglycan-associated lipoprotein YP_001942809.1 820755 D 290315 CDS YP_001942810.1 189346281 6356031 821319..822086 1 NC_010803.1 TIGRFAM: tol-pal system protein YbgF; KEGG: cph:Cpha266_0862 membrane lipoprotein lipid attachment site; tol-pal system protein YbgF 822086 6356031 Clim_0750 Chlorobium limicola DSM 245 tol-pal system protein YbgF YP_001942810.1 821319 D 290315 CDS YP_001942811.1 189346282 6356032 822210..823235 1 NC_010803.1 KEGG: cph:Cpha266_0316 hypothetical protein; hypothetical protein 823235 6356032 Clim_0751 Chlorobium limicola DSM 245 hypothetical protein YP_001942811.1 822210 D 290315 CDS YP_001942812.1 189346283 6356033 823257..823559 1 NC_010803.1 PFAM: FeoA family protein; KEGG: pvi:Cvib_0519 FeoA family protein; FeoA family protein 823559 6356033 Clim_0752 Chlorobium limicola DSM 245 FeoA family protein YP_001942812.1 823257 D 290315 CDS YP_001942813.1 189346284 6356034 823556..823783 1 NC_010803.1 PFAM: FeoA family protein; KEGG: cph:Cpha266_0318 FeoA family protein; FeoA family protein 823783 6356034 Clim_0753 Chlorobium limicola DSM 245 FeoA family protein YP_001942813.1 823556 D 290315 CDS YP_001942814.1 189346285 6356035 823783..826143 1 NC_010803.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; Miro domain protein; KEGG: pvi:Cvib_0521 ferrous iron transport protein B; ferrous iron transport protein B 826143 6356035 Clim_0754 Chlorobium limicola DSM 245 ferrous iron transport protein B YP_001942814.1 823783 D 290315 CDS YP_001942815.1 189346286 6356036 826222..826446 1 NC_010803.1 KEGG: cph:Cpha266_0322 hypothetical protein; hypothetical protein 826446 6356036 Clim_0755 Chlorobium limicola DSM 245 hypothetical protein YP_001942815.1 826222 D 290315 CDS YP_001942816.1 189346287 6356037 826553..826921 1 NC_010803.1 KEGG: cph:Cpha266_0323 hypothetical protein; hypothetical protein 826921 6356037 Clim_0756 Chlorobium limicola DSM 245 hypothetical protein YP_001942816.1 826553 D 290315 CDS YP_001942817.1 189346288 6356038 826962..827468 1 NC_010803.1 TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: cph:Cpha266_0324 flavodoxin; flavodoxin 827468 6356038 Clim_0757 Chlorobium limicola DSM 245 flavodoxin YP_001942817.1 826962 D 290315 CDS YP_001942818.1 189346289 6356039 complement(827561..827995) 1 NC_010803.1 KEGG: cph:Cpha266_0863 photosystem P840 reaction center protein PscD; photosystem P840 reaction center protein PscD 827995 6356039 Clim_0758 Chlorobium limicola DSM 245 photosystem P840 reaction center protein PscD YP_001942818.1 827561 R 290315 CDS YP_001942819.1 189346290 6356040 complement(828239..829510) 1 NC_010803.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: cph:Cpha266_1031 DNA-directed DNA polymerase; DNA-directed DNA polymerase 829510 6356040 Clim_0759 Chlorobium limicola DSM 245 DNA-directed DNA polymerase YP_001942819.1 828239 R 290315 CDS YP_001942820.1 189346291 6356042 complement(830690..832609) 1 NC_010803.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 832609 dnaK 6356042 dnaK Chlorobium limicola DSM 245 molecular chaperone DnaK YP_001942820.1 830690 R 290315 CDS YP_001942821.1 189346292 6356043 complement(832684..833088) 1 NC_010803.1 PFAM: heat shock protein Hsp20; KEGG: plt:Plut_0622 heat shock protein, HSP20 family; heat shock protein Hsp20 833088 6356043 Clim_0762 Chlorobium limicola DSM 245 heat shock protein Hsp20 YP_001942821.1 832684 R 290315 CDS YP_001942822.1 189346293 6356044 complement(833456..833854) 1 NC_010803.1 PFAM: regulatory protein ArsR; KEGG: plt:Plut_0623 ArsR family transcriptional regulator; ArsR family transcriptional regulator 833854 6356044 Clim_0763 Chlorobium limicola DSM 245 ArsR family transcriptional regulator YP_001942822.1 833456 R 290315 CDS YP_001942823.1 189346294 6356045 complement(833982..834248) 1 NC_010803.1 KEGG: cph:Cpha266_0867 transmembrane anti-sigma factor; transmembrane anti-sigma factor 834248 6356045 Clim_0764 Chlorobium limicola DSM 245 transmembrane anti-sigma factor YP_001942823.1 833982 R 290315 CDS YP_001942824.1 189346295 6356046 complement(834277..834906) 1 NC_010803.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 834906 6356046 Clim_0765 Chlorobium limicola DSM 245 RNA polymerase sigma factor RpoE YP_001942824.1 834277 R 290315 CDS YP_001942825.1 189346296 6356047 835081..836649 1 NC_010803.1 PFAM: amine oxidase; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cch:Cag_1888 carotenoid isomerase; amine oxidase 836649 6356047 Clim_0766 Chlorobium limicola DSM 245 amine oxidase YP_001942825.1 835081 D 290315 CDS YP_001942826.1 189346297 6356048 complement(836851..838062) 1 NC_010803.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: cph:Cpha266_0875 L-alanine dehydrogenase; alanine dehydrogenase/PNT domain-containing protein 838062 6356048 Clim_0767 Chlorobium limicola DSM 245 alanine dehydrogenase/PNT domain-containing protein YP_001942826.1 836851 R 290315 CDS YP_001942827.1 189346298 6356049 complement(838142..838822) 1 NC_010803.1 PFAM: ferredoxin; KEGG: cte:CT0651 chlorosome envelope protein J; ferredoxin 838822 6356049 Clim_0768 Chlorobium limicola DSM 245 ferredoxin YP_001942827.1 838142 R 290315 CDS YP_001942828.1 189346299 6356050 complement(839008..839673) 1 NC_010803.1 PFAM: ferredoxin; KEGG: cph:Cpha266_0877 ferredoxin; ferredoxin 839673 6356050 Clim_0769 Chlorobium limicola DSM 245 ferredoxin YP_001942828.1 839008 R 290315 CDS YP_001942829.1 189346300 6356051 complement(839888..843238) 1 NC_010803.1 KEGG: cph:Cpha266_0878 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; transcription-repair coupling factor 843238 6356051 Clim_0770 Chlorobium limicola DSM 245 transcription-repair coupling factor YP_001942829.1 839888 R 290315 CDS YP_001942830.1 189346301 6356052 843279..844259 1 NC_010803.1 KEGG: cph:Cpha266_0879 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 844259 6356052 Clim_0771 Chlorobium limicola DSM 245 oligopeptide/dipeptide ABC transporter ATPase YP_001942830.1 843279 D 290315 CDS YP_001942831.1 189346302 6356053 844343..845044 1 NC_010803.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cph:Cpha266_0880 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 845044 6356053 Clim_0772 Chlorobium limicola DSM 245 winged helix family two component transcriptional regulator YP_001942831.1 844343 D 290315 CDS YP_001942832.1 189346303 6356054 845047..846819 1 NC_010803.1 KEGG: cph:Cpha266_0881 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 846819 6356054 Clim_0773 Chlorobium limicola DSM 245 multi-sensor signal transduction histidine kinase YP_001942832.1 845047 D 290315 CDS YP_001942833.1 189346304 6356055 846836..848122 1 NC_010803.1 PFAM: MscS Mechanosensitive ion channel; KEGG: pvi:Cvib_1145 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS 848122 6356055 Clim_0774 Chlorobium limicola DSM 245 mechanosensitive ion channel MscS YP_001942833.1 846836 D 290315 CDS YP_001942834.1 189346305 6356056 complement(848119..848652) 1 NC_010803.1 PFAM: NUDIX hydrolase; KEGG: cph:Cpha266_0883 NUDIX hydrolase; NUDIX hydrolase 848652 6356056 Clim_0775 Chlorobium limicola DSM 245 NUDIX hydrolase YP_001942834.1 848119 R 290315 CDS YP_001942835.1 189346306 6356057 848731..849201 1 NC_010803.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cph:Cpha266_0884 redoxin domain protein; alkyl hydroperoxide reductase 849201 6356057 Clim_0776 Chlorobium limicola DSM 245 alkyl hydroperoxide reductase YP_001942835.1 848731 D 290315 CDS YP_001942836.1 189346307 6356058 849210..849773 1 NC_010803.1 PFAM: protein of unknown function DUF179; KEGG: cph:Cpha266_0885 protein of unknown function DUF179; hypothetical protein 849773 6356058 Clim_0777 Chlorobium limicola DSM 245 hypothetical protein YP_001942836.1 849210 D 290315 CDS YP_001942837.1 189346308 6356059 850614..851180 1 NC_010803.1 KEGG: cte:CT0686 hypothetical protein; hypothetical protein 851180 6356059 Clim_0778 Chlorobium limicola DSM 245 hypothetical protein YP_001942837.1 850614 D 290315 CDS YP_001942838.1 189346309 6356060 851204..851527 1 NC_010803.1 KEGG: ppd:Ppro_1272 hypothetical protein; hypothetical protein 851527 6356060 Clim_0779 Chlorobium limicola DSM 245 hypothetical protein YP_001942838.1 851204 D 290315 CDS YP_001942839.1 189346310 6356061 851630..853075 1 NC_010803.1 KEGG: cph:Cpha266_1446 hypothetical protein; hypothetical protein 853075 6356061 Clim_0780 Chlorobium limicola DSM 245 hypothetical protein YP_001942839.1 851630 D 290315 CDS YP_001942840.1 189346311 6356062 853075..853710 1 NC_010803.1 KEGG: cph:Cpha266_1445 hypothetical protein; hypothetical protein 853710 6356062 Clim_0781 Chlorobium limicola DSM 245 hypothetical protein YP_001942840.1 853075 D 290315 CDS YP_001942841.1 189346312 6356063 853703..857068 1 NC_010803.1 KEGG: cph:Cpha266_1444 hypothetical protein; hypothetical protein 857068 6356063 Clim_0782 Chlorobium limicola DSM 245 hypothetical protein YP_001942841.1 853703 D 290315 CDS YP_001942842.1 189346313 6356064 857065..858240 1 NC_010803.1 KEGG: cch:Cag_0844 hypothetical protein; hypothetical protein 858240 6356064 Clim_0783 Chlorobium limicola DSM 245 hypothetical protein YP_001942842.1 857065 D 290315 CDS YP_001942843.1 189346314 6356065 858395..859090 1 NC_010803.1 KEGG: gur:Gura_2921 hypothetical protein; hypothetical protein 859090 6356065 Clim_0784 Chlorobium limicola DSM 245 hypothetical protein YP_001942843.1 858395 D 290315 CDS YP_001942844.1 189346315 6353855 859087..860325 1 NC_010803.1 PFAM: AAA-4 family protein; KEGG: gur:Gura_2922 transcriptional regulator; transcriptional regulator 860325 6353855 Clim_0785 Chlorobium limicola DSM 245 transcriptional regulator YP_001942844.1 859087 D 290315 CDS YP_001942845.1 189346316 6353856 complement(860463..861830) 1 NC_010803.1 PFAM: transposase IS4 family protein; KEGG: cph:Cpha266_2634 transposase, IS4 family protein; transposase IS4 family protein 861830 6353856 Clim_0786 Chlorobium limicola DSM 245 transposase IS4 family protein YP_001942845.1 860463 R 290315 CDS YP_001942846.1 189346317 6353857 861931..862122 1 NC_010803.1 KEGG: dde:Dde_0697 response regulator receiver domain protein (CheY-like); hypothetical protein 862122 6353857 Clim_0787 Chlorobium limicola DSM 245 hypothetical protein YP_001942846.1 861931 D 290315 CDS YP_001942847.1 189346318 6353858 862235..862513 1 NC_010803.1 KEGG: cch:Cag_0844 hypothetical protein; hypothetical protein 862513 6353858 Clim_0788 Chlorobium limicola DSM 245 hypothetical protein YP_001942847.1 862235 D 290315 CDS YP_001942848.1 189346319 6353859 complement(862667..863401) 1 NC_010803.1 KEGG: cph:Cpha266_1517 conserved hypothetical cytosolic protein; hypothetical protein 863401 6353859 Clim_0789 Chlorobium limicola DSM 245 hypothetical protein YP_001942848.1 862667 R 290315 CDS YP_001942849.1 189346320 6353860 complement(863361..864242) 1 NC_010803.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: cph:Cpha266_1518 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 864242 6353860 Clim_0790 Chlorobium limicola DSM 245 DNA methylase N-4/N-6 domain-containing protein YP_001942849.1 863361 R 290315 CDS YP_001942850.1 189346321 6353861 complement(864572..866164) 1 NC_010803.1 TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; KEGG: cph:Cpha266_1177 bacterial peptide chain release factor 3 (bRF-3); peptide chain release factor 3 866164 6353861 Clim_0791 Chlorobium limicola DSM 245 peptide chain release factor 3 YP_001942850.1 864572 R 290315 CDS YP_001942851.1 189346322 6353862 866440..867771 1 NC_010803.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: cte:CT0822 sodium:alanine symporter family protein; amino acid carrier protein 867771 6353862 Clim_0792 Chlorobium limicola DSM 245 amino acid carrier protein YP_001942851.1 866440 D 290315 CDS YP_001942852.1 189346323 6353863 867867..868400 1 NC_010803.1 PFAM: Inorganic pyrophosphatase; KEGG: cph:Cpha266_1182 inorganic diphosphatase; inorganic diphosphatase 868400 6353863 Clim_0793 Chlorobium limicola DSM 245 inorganic diphosphatase YP_001942852.1 867867 D 290315 CDS YP_001942853.1 189346324 6353864 868609..869493 1 NC_010803.1 PFAM: protein of unknown function DUF344; KEGG: plt:Plut_1276 hypothetical protein; hypothetical protein 869493 6353864 Clim_0794 Chlorobium limicola DSM 245 hypothetical protein YP_001942853.1 868609 D 290315 CDS YP_001942854.1 189346325 6353865 869530..870960 1 NC_010803.1 TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; KEGG: cph:Cpha266_1185 fumarate hydratase, class II; class II fumarate hydratase 870960 6353865 Clim_0795 Chlorobium limicola DSM 245 class II fumarate hydratase YP_001942854.1 869530 D 290315 CDS YP_001942855.1 189346326 6353866 871558..872085 1 NC_010803.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: cph:Cpha266_1186 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 872085 6353866 Clim_0796 Chlorobium limicola DSM 245 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_001942855.1 871558 D 290315 CDS YP_001942856.1 189346327 6353867 872140..873009 1 NC_010803.1 PFAM: N-acetylneuraminic acid synthase domain; KEGG: cte:CT0825 sialic acid synthase; N-acetylneuraminate synthase 873009 6353867 Clim_0797 Chlorobium limicola DSM 245 N-acetylneuraminate synthase YP_001942856.1 872140 D 290315 CDS YP_001942857.1 189346328 6353868 873384..874049 1 NC_010803.1 KEGG: yli:YALI0D24365g hypothetical protein; hypothetical protein 874049 6353868 Clim_0798 Chlorobium limicola DSM 245 hypothetical protein YP_001942857.1 873384 D 290315 CDS YP_001942858.1 189346329 6353869 874127..875005 1 NC_010803.1 KEGG: cph:Cpha266_1026 hypothetical protein; hypothetical protein 875005 6353869 Clim_0799 Chlorobium limicola DSM 245 hypothetical protein YP_001942858.1 874127 D 290315 CDS YP_001942859.1 189346330 6353870 875230..877131 1 NC_010803.1 molecular chaperone; heat shock protein 90 877131 6353870 Clim_0800 Chlorobium limicola DSM 245 heat shock protein 90 YP_001942859.1 875230 D 290315 CDS YP_001942860.1 189346331 6353871 877171..878046 1 NC_010803.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: cph:Cpha266_1189 protein of unknown function DUF125, transmembrane; hypothetical protein 878046 6353871 Clim_0801 Chlorobium limicola DSM 245 hypothetical protein YP_001942860.1 877171 D 290315 CDS YP_001942861.1 189346332 6353872 complement(878200..879762) 1 NC_010803.1 KEGG: cph:Cpha266_1190 hypothetical protein; hypothetical protein 879762 6353872 Clim_0802 Chlorobium limicola DSM 245 hypothetical protein YP_001942861.1 878200 R 290315 CDS YP_001942862.1 189346333 6353873 880047..880685 1 NC_010803.1 PFAM: UspA domain protein; KEGG: pvi:Cvib_1021 UspA domain protein; UspA domain-containing protein 880685 6353873 Clim_0803 Chlorobium limicola DSM 245 UspA domain-containing protein YP_001942862.1 880047 D 290315 CDS YP_001942863.1 189346334 6353874 880735..882255 1 NC_010803.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: cph:Cpha266_1191 fumarase; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha 882255 6353874 Clim_0804 Chlorobium limicola DSM 245 Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha YP_001942863.1 880735 D 290315 CDS YP_001942864.1 189346335 6353875 882329..882466 1 NC_010803.1 hypothetical protein 882466 6353875 Clim_0805 Chlorobium limicola DSM 245 hypothetical protein YP_001942864.1 882329 D 290315 CDS YP_001942865.1 189346336 6353876 complement(882429..883475) 1 NC_010803.1 KEGG: cph:Cpha266_2139 transposase and inactivated derivatives; transposase and inactivated derivatives 883475 6353876 Clim_0806 Chlorobium limicola DSM 245 transposase and inactivated derivatives YP_001942865.1 882429 R 290315 CDS YP_001942866.1 189346337 6353877 883523..883717 1 NC_010803.1 KEGG: plt:Plut_1268 sodium pump decarboxylase, gamma subunit; sodium pump decarboxylase subunit gamma 883717 6353877 Clim_0807 Chlorobium limicola DSM 245 sodium pump decarboxylase subunit gamma YP_001942866.1 883523 D 290315 CDS YP_001942867.1 189346338 6353878 883783..885618 1 NC_010803.1 PFAM: biotin/lipoyl attachment domain-containing protein; pyruvate carboxyltransferase; KEGG: plt:Plut_1267 oxaloacetate decarboxylase, alpha subunit; biotin/lipoyl attachment domain-containing protein 885618 6353878 Clim_0808 Chlorobium limicola DSM 245 biotin/lipoyl attachment domain-containing protein YP_001942867.1 883783 D 290315 CDS YP_001942868.1 189346339 6353879 885666..887216 1 NC_010803.1 KEGG: plt:Plut_1266 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; sodium ion-translocating decarboxylase subunit beta 887216 6353879 Clim_0809 Chlorobium limicola DSM 245 sodium ion-translocating decarboxylase subunit beta YP_001942868.1 885666 D 290315 CDS YP_001942869.1 189346340 6353880 complement(887304..888506) 1 NC_010803.1 KEGG: cph:Cpha266_1193 internalin-related protein; internalin-like protein 888506 6353880 Clim_0810 Chlorobium limicola DSM 245 internalin-like protein YP_001942869.1 887304 R 290315 CDS YP_001942870.1 189346341 6353881 888723..891086 1 NC_010803.1 PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: cph:Cpha266_1194 kojibiose phosphorylase; Kojibiose phosphorylase 891086 6353881 Clim_0811 Chlorobium limicola DSM 245 Kojibiose phosphorylase YP_001942870.1 888723 D 290315 CDS YP_001942871.1 189346342 6353882 891317..894886 1 NC_010803.1 KEGG: cph:Cpha266_1195 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 894886 6353882 Clim_0812 Chlorobium limicola DSM 245 DNA polymerase III subunit alpha YP_001942871.1 891317 D 290315 CDS YP_001942872.1 189346343 6353883 895009..895338 1 NC_010803.1 TIGRFAM: thioredoxin; PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: plt:Plut_1261 thioredoxin; thioredoxin 895338 6353883 Clim_0813 Chlorobium limicola DSM 245 thioredoxin YP_001942872.1 895009 D 290315 CDS YP_001942873.1 189346344 6353884 895413..896348 1 NC_010803.1 KEGG: plt:Plut_1260 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; thioredoxin reductase 896348 6353884 Clim_0814 Chlorobium limicola DSM 245 thioredoxin reductase YP_001942873.1 895413 D 290315 CDS YP_001942874.1 189346345 6353885 complement(896424..896612) 1 NC_010803.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pvi:Cvib_0749 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 896612 6353885 Clim_0815 Chlorobium limicola DSM 245 4Fe-4S ferredoxin YP_001942874.1 896424 R 290315 CDS YP_001942875.1 189346346 6353886 896873..897238 1 NC_010803.1 KEGG: pvi:Cvib_1008 hypothetical protein; hypothetical protein 897238 6353886 Clim_0816 Chlorobium limicola DSM 245 hypothetical protein YP_001942875.1 896873 D 290315 CDS YP_001942876.1 189346347 6353887 complement(897190..897849) 1 NC_010803.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: pvi:Cvib_1007 tRNA guanosine-2'-O-methyltransferase; tRNA guanosine-2'-O-methyltransferase 897849 6353887 Clim_0817 Chlorobium limicola DSM 245 tRNA guanosine-2'-O-methyltransferase YP_001942876.1 897190 R 290315 CDS YP_001942877.1 189346348 6353888 898267..899340 1 NC_010803.1 PFAM: metallophosphoesterase; KEGG: cph:Cpha266_1199 hypothetical protein; metallophosphoesterase 899340 6353888 Clim_0818 Chlorobium limicola DSM 245 metallophosphoesterase YP_001942877.1 898267 D 290315 CDS YP_001942878.1 189346349 6353889 899342..900250 1 NC_010803.1 KEGG: cph:Cpha266_1201 hypothetical protein; hypothetical protein 900250 6353889 Clim_0819 Chlorobium limicola DSM 245 hypothetical protein YP_001942878.1 899342 D 290315 CDS YP_001942879.1 189346350 6353890 900404..903157 1 NC_010803.1 KEGG: cph:Cpha266_1202 hypothetical protein; hypothetical protein 903157 6353890 Clim_0820 Chlorobium limicola DSM 245 hypothetical protein YP_001942879.1 900404 D 290315 CDS YP_001942880.1 189346351 6353891 903379..904464 1 NC_010803.1 KEGG: gfo:GFO_0037 membrane protein containing adenylate/guanylate cyclase catalytic domain; adenylate/guanylate cyclase 904464 6353891 Clim_0821 Chlorobium limicola DSM 245 adenylate/guanylate cyclase YP_001942880.1 903379 D 290315 CDS YP_001942881.1 189346352 6353892 complement(904486..905679) 1 NC_010803.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: fjo:Fjoh_4928 metal dependent phosphohydrolase; metal dependent phosphohydrolase 905679 6353892 Clim_0822 Chlorobium limicola DSM 245 metal dependent phosphohydrolase YP_001942881.1 904486 R 290315 CDS YP_001942882.1 189346353 6353893 905755..906633 1 NC_010803.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: gfo:GFO_3394 secreted PAP2 superfamily protein; PA-phosphatase-like phosphoesterase 906633 6353893 Clim_0823 Chlorobium limicola DSM 245 PA-phosphatase-like phosphoesterase YP_001942882.1 905755 D 290315 CDS YP_001942883.1 189346354 6353894 complement(906868..907527) 1 NC_010803.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cph:Cpha266_1237 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase 907527 6353894 Clim_0824 Chlorobium limicola DSM 245 HAD-superfamily hydrolase YP_001942883.1 906868 R 290315 CDS YP_001942884.1 189346355 6353895 complement(907559..908209) 1 NC_010803.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cph:Cpha266_1238 methyltransferase type 11; type 12 methyltransferase 908209 6353895 Clim_0825 Chlorobium limicola DSM 245 type 12 methyltransferase YP_001942884.1 907559 R 290315 CDS YP_001942885.1 189346356 6353896 complement(908310..908675) 1 NC_010803.1 PFAM: thioesterase superfamily protein; KEGG: cch:Cag_0621 cytosolic long-chain acyl-CoA thioester hydrolase family protein; thioesterase superfamily protein 908675 6353896 Clim_0826 Chlorobium limicola DSM 245 thioesterase superfamily protein YP_001942885.1 908310 R 290315 CDS YP_001942886.1 189346357 6353897 complement(908806..910446) 1 NC_010803.1 PFAM: protein of unknown function DUF814; KEGG: cph:Cpha266_0942 protein of unknown function DUF814; hypothetical protein 910446 6353897 Clim_0827 Chlorobium limicola DSM 245 hypothetical protein YP_001942886.1 908806 R 290315 CDS YP_001942887.1 189346358 6353898 910631..911155 1 NC_010803.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: plt:Plut_0726 deoxycytidylate deaminase; zinc-binding CMP/dCMP deaminase 911155 6353898 Clim_0828 Chlorobium limicola DSM 245 zinc-binding CMP/dCMP deaminase YP_001942887.1 910631 D 290315 CDS YP_001942888.1 189346359 6353899 911149..912267 1 NC_010803.1 KEGG: cph:Cpha266_0944 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; riboflavin biosynthesis protein RibD 912267 6353899 Clim_0829 Chlorobium limicola DSM 245 riboflavin biosynthesis protein RibD YP_001942888.1 911149 D 290315 CDS YP_001942889.1 189346360 6353900 912289..912738 1 NC_010803.1 PFAM: DoxX family protein; KEGG: pvi:Cvib_1104 DoxX family protein; DoxX family protein 912738 6353900 Clim_0830 Chlorobium limicola DSM 245 DoxX family protein YP_001942889.1 912289 D 290315 CDS YP_001942890.1 189346361 6353902 913877..914650 1 NC_010803.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: cph:Cpha266_0947 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 914650 6353902 Clim_0832 Chlorobium limicola DSM 245 ErfK/YbiS/YcfS/YnhG family protein YP_001942890.1 913877 D 290315 CDS YP_001942891.1 189346362 6353903 914899..915420 1 NC_010803.1 antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase 915420 tpx 6353903 tpx Chlorobium limicola DSM 245 thiol peroxidase YP_001942891.1 914899 D 290315 CDS YP_001942892.1 189346363 6353904 915887..917839 1 NC_010803.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cph:Cpha266_0951 alpha amylase, catalytic region; alpha amylase 917839 6353904 Clim_0834 Chlorobium limicola DSM 245 alpha amylase YP_001942892.1 915887 D 290315 CDS YP_001942893.1 189346364 6353905 917973..918632 1 NC_010803.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 918632 6353905 Clim_0835 Chlorobium limicola DSM 245 riboflavin synthase subunit alpha YP_001942893.1 917973 D 290315 CDS YP_001942894.1 189346365 6353906 918633..919982 1 NC_010803.1 PFAM: ATPase AAA; SMART: AAA ATPase; KEGG: pvi:Cvib_1101 recombination factor protein RarA; recombination factor protein RarA 919982 6353906 Clim_0836 Chlorobium limicola DSM 245 recombination factor protein RarA YP_001942894.1 918633 D 290315 CDS YP_001942895.1 189346366 6353907 920076..921464 1 NC_010803.1 PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_0954 outer membrane efflux protein; outer membrane efflux protein 921464 6353907 Clim_0837 Chlorobium limicola DSM 245 outer membrane efflux protein YP_001942895.1 920076 D 290315 CDS YP_001942896.1 189346367 6353908 complement(921461..922411) 1 NC_010803.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cph:Cpha266_0955 methyltransferase type 12; type 12 methyltransferase 922411 6353908 Clim_0838 Chlorobium limicola DSM 245 type 12 methyltransferase YP_001942896.1 921461 R 290315 CDS YP_001942897.1 189346368 6353909 complement(922429..922947) 1 NC_010803.1 PFAM: histidine triad (HIT) protein; KEGG: cph:Cpha266_0956 histidine triad (HIT) protein; histidine triad (HIT) protein 922947 6353909 Clim_0839 Chlorobium limicola DSM 245 histidine triad (HIT) protein YP_001942897.1 922429 R 290315 CDS YP_001942898.1 189346369 6353912 923278..923871 1 NC_010803.1 KEGG: cph:Cpha266_0957 hypothetical protein; hypothetical protein 923871 6353912 Clim_0840 Chlorobium limicola DSM 245 hypothetical protein YP_001942898.1 923278 D 290315 CDS YP_001942899.1 189346370 6353913 923853..924908 1 NC_010803.1 PFAM: ferrochelatase; KEGG: pvi:Cvib_1096 ferrochelatase; ferrochelatase 924908 6353913 Clim_0841 Chlorobium limicola DSM 245 ferrochelatase YP_001942899.1 923853 D 290315 CDS YP_001942900.1 189346371 6353914 924940..925545 1 NC_010803.1 PFAM: hypothetical protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: cph:Cpha266_0959 hypothetical protein; hypothetical protein 925545 6353914 Clim_0842 Chlorobium limicola DSM 245 hypothetical protein YP_001942900.1 924940 D 290315 CDS YP_001942901.1 189346372 6353915 925542..925793 1 NC_010803.1 KEGG: pvi:Cvib_1094 hypothetical protein; hypothetical protein 925793 6353915 Clim_0843 Chlorobium limicola DSM 245 hypothetical protein YP_001942901.1 925542 D 290315 CDS YP_001942902.1 189346373 6353916 926008..926439 1 NC_010803.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: cte:CT0766 NADH dehydrogenase I, subunit 3; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 926439 6353916 Clim_0844 Chlorobium limicola DSM 245 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_001942902.1 926008 D 290315 CDS YP_001942903.1 189346374 6353917 926467..927036 1 NC_010803.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 927036 6353917 Clim_0845 Chlorobium limicola DSM 245 NADH dehydrogenase subunit B YP_001942903.1 926467 D 290315 CDS YP_001942904.1 189346375 6353918 927063..927590 1 NC_010803.1 TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: cph:Cpha266_0963 NADH (or F420H2) dehydrogenase, subunit C; NADH (or F420H2) dehydrogenase subunit C 927590 6353918 Clim_0846 Chlorobium limicola DSM 245 NADH (or F420H2) dehydrogenase subunit C YP_001942904.1 927063 D 290315 CDS YP_001942905.1 189346376 6353919 927639..928826 1 NC_010803.1 PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: cph:Cpha266_0964 NADH dehydrogenase (ubiquinone); NADH dehydrogenase (quinone) 928826 6353919 Clim_0847 Chlorobium limicola DSM 245 NADH dehydrogenase (quinone) YP_001942905.1 927639 D 290315 CDS YP_001942906.1 189346377 6353920 928823..929941 1 NC_010803.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: pvi:Cvib_1089 respiratory-chain NADH dehydrogenase, subunit 1; NADH dehydrogenase (quinone) 929941 6353920 Clim_0848 Chlorobium limicola DSM 245 NADH dehydrogenase (quinone) YP_001942906.1 928823 D 290315 CDS YP_001942907.1 189346378 6353921 929987..930601 1 NC_010803.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pvi:Cvib_1088 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 930601 6353921 Clim_0849 Chlorobium limicola DSM 245 4Fe-4S ferredoxin YP_001942907.1 929987 D 290315 CDS YP_001942908.1 189346379 6353922 930629..931150 1 NC_010803.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: pvi:Cvib_1087 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 931150 6353922 Clim_0850 Chlorobium limicola DSM 245 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_001942908.1 930629 D 290315 CDS YP_001942909.1 189346380 6353923 931163..931480 1 NC_010803.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: cph:Cpha266_0968 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase chain 4L 931480 6353923 Clim_0851 Chlorobium limicola DSM 245 NADH-ubiquinone oxidoreductase chain 4L YP_001942909.1 931163 D 290315 CDS YP_001942910.1 189346381 6353924 931530..933842 1 NC_010803.1 KEGG: cph:Cpha266_0969 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L 933842 6353924 Clim_0852 Chlorobium limicola DSM 245 proton-translocating NADH-quinone oxidoreductase subunit L YP_001942910.1 931530 D 290315 CDS YP_001942911.1 189346382 6353925 933883..935520 1 NC_010803.1 KEGG: cph:Cpha266_0970 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 935520 6353925 Clim_0853 Chlorobium limicola DSM 245 proton-translocating NADH-quinone oxidoreductase subunit M YP_001942911.1 933883 D 290315 CDS YP_001942912.1 189346383 6353926 935558..937093 1 NC_010803.1 KEGG: cph:Cpha266_0971 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit N 937093 6353926 Clim_0854 Chlorobium limicola DSM 245 proton-translocating NADH-quinone oxidoreductase subunit N YP_001942912.1 935558 D 290315 CDS YP_001942913.1 189346384 6353927 937308..938393 1 NC_010803.1 KEGG: cph:Cpha266_0972 hydrogenase (NiFe) small subunit HydA; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Nickel-iron dehydrogenase small subunit domain protein; hydrogenase (NiFe) small subunit HydA 938393 6353927 Clim_0855 Chlorobium limicola DSM 245 hydrogenase (NiFe) small subunit HydA YP_001942913.1 937308 D 290315 CDS YP_001942914.1 189346385 6353928 938407..940125 1 NC_010803.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: cph:Cpha266_0973 nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase large subunit 940125 6353928 Clim_0856 Chlorobium limicola DSM 245 nickel-dependent hydrogenase large subunit YP_001942914.1 938407 D 290315 CDS YP_001942915.1 189346386 6353929 940138..940821 1 NC_010803.1 TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: cph:Cpha266_0974 Ni/Fe-hydrogenase, b-type cytochrome subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit 940821 6353929 Clim_0857 Chlorobium limicola DSM 245 Ni/Fe-hydrogenase, b-type cytochrome subunit YP_001942915.1 940138 D 290315 CDS YP_001942916.1 189346387 6353930 940818..941291 1 NC_010803.1 TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: cph:Cpha266_0975 hydrogenase maturation protease; hydrogenase maturation protease 941291 6353930 Clim_0858 Chlorobium limicola DSM 245 hydrogenase maturation protease YP_001942916.1 940818 D 290315 CDS YP_001942917.1 189346388 6353931 complement(941350..942009) 1 NC_010803.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 942009 folE 6353931 folE Chlorobium limicola DSM 245 GTP cyclohydrolase I YP_001942917.1 941350 R 290315 CDS YP_001942918.1 189346389 6353932 complement(941984..942433) 1 NC_010803.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: cph:Cpha266_0977 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; hypothetical protein 942433 6353932 Clim_0860 Chlorobium limicola DSM 245 hypothetical protein YP_001942918.1 941984 R 290315 CDS YP_001942919.1 189346390 6354096 942684..943112 1 NC_010803.1 PFAM: OsmC family protein; KEGG: cph:Cpha266_1720 OsmC family protein; OsmC family protein 943112 6354096 Clim_0861 Chlorobium limicola DSM 245 OsmC family protein YP_001942919.1 942684 D 290315 CDS YP_001942920.1 189346391 6354097 943326..943634 1 NC_010803.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: pvi:Cvib_1080 thioredoxin; thioredoxin 943634 6354097 Clim_0862 Chlorobium limicola DSM 245 thioredoxin YP_001942920.1 943326 D 290315 CDS YP_001942921.1 189346392 6354098 complement(943696..944388) 1 NC_010803.1 PFAM: peptidase membrane zinc metallopeptidase KEGG: pvi:Cvib_1043 peptidase, membrane zinc metallopeptidase; peptidase membrane zinc metallopeptidase 944388 6354098 Clim_0863 Chlorobium limicola DSM 245 peptidase membrane zinc metallopeptidase YP_001942921.1 943696 R 290315 CDS YP_001942922.1 189346393 6354099 944605..945948 1 NC_010803.1 PFAM: peptidase S14 ClpP; protein of unknown function DUF107; KEGG: cph:Cpha266_1160 nodulation efficiency protein NfeD; hypothetical protein 945948 6354099 Clim_0864 Chlorobium limicola DSM 245 hypothetical protein YP_001942922.1 944605 D 290315 CDS YP_001942923.1 189346394 6354100 945954..946718 1 NC_010803.1 PFAM: hypothetical protein; KEGG: plt:Plut_1305 hypothetical protein; hypothetical protein 946718 6354100 Clim_0865 Chlorobium limicola DSM 245 hypothetical protein YP_001942923.1 945954 D 290315 CDS YP_001942924.1 189346395 6354101 946731..947192 1 NC_010803.1 PFAM: UspA domain protein; KEGG: plt:Plut_1294 universal stress protein family; UspA domain-containing protein 947192 6354101 Clim_0866 Chlorobium limicola DSM 245 UspA domain-containing protein YP_001942924.1 946731 D 290315 CDS YP_001942925.1 189346396 6354102 complement(947217..948221) 1 NC_010803.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase 948221 6354102 Clim_0867 Chlorobium limicola DSM 245 arginine/ornithine transport system ATPase YP_001942925.1 947217 R 290315 CDS YP_001942926.1 189346397 6354103 complement(948236..950383) 1 NC_010803.1 MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 950383 6354103 Clim_0868 Chlorobium limicola DSM 245 methylmalonyl-CoA mutase YP_001942926.1 948236 R 290315 CDS YP_001942927.1 189346398 6354104 complement(950380..952194) 1 NC_010803.1 PFAM: methylmalonyl-CoA mutase; KEGG: cph:Cpha266_1165 methylmalonyl-CoA mutase; methylmalonyl-CoA mutase 952194 6354104 Clim_0869 Chlorobium limicola DSM 245 methylmalonyl-CoA mutase YP_001942927.1 950380 R 290315 CDS YP_001942928.1 189346399 6354105 complement(952181..953974) 1 NC_010803.1 KEGG: cph:Cpha266_1166 acetyl-CoA carboxylase alpha subunit-like; acetyl-CoA carboxylase subunit alpha-like protein 953974 6354105 Clim_0870 Chlorobium limicola DSM 245 acetyl-CoA carboxylase subunit alpha-like protein YP_001942928.1 952181 R 290315 CDS YP_001942929.1 189346400 6354106 complement(954004..954411) 1 NC_010803.1 TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cph:Cpha266_1167 methylmalonyl-CoA epimerase; methylmalonyl-CoA epimerase 954411 6354106 Clim_0871 Chlorobium limicola DSM 245 methylmalonyl-CoA epimerase YP_001942929.1 954004 R 290315 CDS YP_001942930.1 189346401 6354107 complement(954408..956330) 1 NC_010803.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cph:Cpha266_1168 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 956330 6354107 Clim_0872 Chlorobium limicola DSM 245 AMP-dependent synthetase and ligase YP_001942930.1 954408 R 290315 CDS YP_001942931.1 189346402 6354108 complement(956603..957394) 1 NC_010803.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 957394 ksgA 6354108 ksgA Chlorobium limicola DSM 245 dimethyladenosine transferase YP_001942931.1 956603 R 290315 CDS YP_001942932.1 189346403 6354109 957468..958448 1 NC_010803.1 PFAM: transketolase; transketolase; KEGG: cph:Cpha266_1170 transketolase subunit B; transketolase 958448 6354109 Clim_0874 Chlorobium limicola DSM 245 transketolase YP_001942932.1 957468 D 290315 CDS YP_001942933.1 189346404 6354110 958509..958844 1 NC_010803.1 PFAM: conserved hypothetical protein; KEGG: cph:Cpha266_1171 conserved hypothetical protein 103; hypothetical protein 958844 6354110 Clim_0875 Chlorobium limicola DSM 245 hypothetical protein YP_001942933.1 958509 D 290315 CDS YP_001942934.1 189346405 6354111 958851..959468 1 NC_010803.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 959468 recR 6354111 recR Chlorobium limicola DSM 245 recombination protein RecR YP_001942934.1 958851 D 290315 CDS YP_001942935.1 189346406 6354112 959522..960904 1 NC_010803.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cph:Cpha266_1173 zeta-carotene desaturase; Carotene 7,8-desaturase 960904 6354112 Clim_0877 Chlorobium limicola DSM 245 Carotene 7,8-desaturase YP_001942935.1 959522 D 290315 CDS YP_001942936.1 189346407 6354115 complement(961221..961682) 1 NC_010803.1 hypothetical protein 961682 6354115 Clim_0878 Chlorobium limicola DSM 245 hypothetical protein YP_001942936.1 961221 R 290315 CDS YP_001942937.1 189346408 6354116 complement(961697..963985) 1 NC_010803.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: cte:CT0815 copper-transporting ATPase, E1-E2 family; heavy metal translocating P-type ATPase 963985 6354116 Clim_0879 Chlorobium limicola DSM 245 heavy metal translocating P-type ATPase YP_001942937.1 961697 R 290315 CDS YP_001942938.1 189346409 6354117 964413..965207 1 NC_010803.1 KEGG: cph:Cpha266_1806 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein; serine O-acetyltransferase 965207 6354117 Clim_0880 Chlorobium limicola DSM 245 serine O-acetyltransferase YP_001942938.1 964413 D 290315 CDS YP_001942939.1 189346410 6354118 complement(965223..966416) 1 NC_010803.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 966416 6354118 Clim_0881 Chlorobium limicola DSM 245 chorismate synthase YP_001942939.1 965223 R 290315 CDS YP_001942940.1 189346411 6354119 complement(966504..967490) 1 NC_010803.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 967490 6354119 Clim_0882 Chlorobium limicola DSM 245 delta-aminolevulinic acid dehydratase YP_001942940.1 966504 R 290315 CDS YP_001942941.1 189346412 6354120 967725..968717 1 NC_010803.1 KEGG: cph:Cpha266_1803 hypothetical protein; hypothetical protein 968717 6354120 Clim_0883 Chlorobium limicola DSM 245 hypothetical protein YP_001942941.1 967725 D 290315 CDS YP_001942942.1 189346413 6354121 968714..970030 1 NC_010803.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cph:Cpha266_1802 amine oxidase; amine oxidase 970030 6354121 Clim_0884 Chlorobium limicola DSM 245 amine oxidase YP_001942942.1 968714 D 290315 CDS YP_001942943.1 189346414 6354122 970030..972123 1 NC_010803.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; KEGG: cph:Cpha266_1801 integral membrane sensor hybrid histidine kinase; integral membrane sensor hybrid histidine kinase 972123 6354122 Clim_0885 Chlorobium limicola DSM 245 integral membrane sensor hybrid histidine kinase YP_001942943.1 970030 D 290315 CDS YP_001942944.1 189346415 6354123 complement(972160..973296) 1 NC_010803.1 KEGG: plt:Plut_1434 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; sodium ion-translocating decarboxylase subunit beta 973296 6354123 Clim_0886 Chlorobium limicola DSM 245 sodium ion-translocating decarboxylase subunit beta YP_001942944.1 972160 R 290315 CDS YP_001942945.1 189346416 6354124 complement(973302..973718) 1 NC_010803.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: plt:Plut_1433 biotin carboxyl carrier protein; biotin/lipoyl attachment domain-containing protein 973718 6354124 Clim_0887 Chlorobium limicola DSM 245 biotin/lipoyl attachment domain-containing protein YP_001942945.1 973302 R 290315 CDS YP_001942946.1 189346417 6354125 complement(973721..974092) 1 NC_010803.1 KEGG: plt:Plut_1432 hypothetical protein; hypothetical protein 974092 6354125 Clim_0888 Chlorobium limicola DSM 245 hypothetical protein YP_001942946.1 973721 R 290315 CDS YP_001942947.1 189346418 6354126 complement(974106..975800) 1 NC_010803.1 PFAM: carboxyl transferase; KEGG: plt:Plut_1431 propionyl-CoA carboxylase beta chain; carboxyl transferase 975800 6354126 Clim_0889 Chlorobium limicola DSM 245 carboxyl transferase YP_001942947.1 974106 R 290315 CDS YP_001942948.1 189346419 6354127 975825..976604 1 NC_010803.1 KEGG: cte:CT1430 myo-inositol-1(or 4)-monophosphatase; TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; histidinol-phosphate phosphatase 976604 6354127 Clim_0890 Chlorobium limicola DSM 245 histidinol-phosphate phosphatase YP_001942948.1 975825 D 290315 CDS YP_001942949.1 189346420 6354128 976598..977173 1 NC_010803.1 KEGG: cph:Cpha266_1798 hypothetical protein; hypothetical protein 977173 6354128 Clim_0891 Chlorobium limicola DSM 245 hypothetical protein YP_001942949.1 976598 D 290315 CDS YP_001942950.1 189346421 6354129 complement(977210..977947) 1 NC_010803.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: cph:Cpha266_1797 uroporphyrinogen-III synthase; uroporphyrinogen-III synthase 977947 6354129 Clim_0892 Chlorobium limicola DSM 245 uroporphyrinogen-III synthase YP_001942950.1 977210 R 290315 CDS YP_001942951.1 189346422 6354130 complement(977947..978888) 1 NC_010803.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 978888 hemC 6354130 hemC Chlorobium limicola DSM 245 porphobilinogen deaminase YP_001942951.1 977947 R 290315 CDS YP_001942952.1 189346423 6354131 complement(978914..980185) 1 NC_010803.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 980185 hemA 6354131 hemA Chlorobium limicola DSM 245 glutamyl-tRNA reductase YP_001942952.1 978914 R 290315 CDS YP_001942953.1 189346424 6354132 complement(980287..981168) 1 NC_010803.1 PFAM: cytochrome c assembly protein; KEGG: plt:Plut_1425 HemX protein; cytochrome c assembly protein 981168 6354132 Clim_0895 Chlorobium limicola DSM 245 cytochrome c assembly protein YP_001942953.1 980287 R 290315 CDS YP_001942954.1 189346425 6354133 981344..983170 1 NC_010803.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: cph:Cpha266_1793 GTP-binding protein TypA; GTP-binding protein TypA 983170 6354133 Clim_0896 Chlorobium limicola DSM 245 GTP-binding protein TypA YP_001942954.1 981344 D 290315 CDS YP_001942955.1 189346426 6354134 complement(983306..984403) 1 NC_010803.1 KEGG: cte:CT1423 chlorophyllide reductase, BchX subunit; TIGRFAM: chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; chlorophyllide reductase iron protein subunit X 984403 6354134 Clim_0897 Chlorobium limicola DSM 245 chlorophyllide reductase iron protein subunit X YP_001942955.1 983306 R 290315 CDS YP_001942956.1 189346427 6354135 complement(984417..985421) 1 NC_010803.1 TIGRFAM: chlorophyll synthesis pathway, BchC; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cph:Cpha266_1791 chlorophyll synthesis pathway, BchC; chlorophyll synthesis pathway protein BchC 985421 6354135 Clim_0898 Chlorobium limicola DSM 245 chlorophyll synthesis pathway protein BchC YP_001942956.1 984417 R 290315 CDS YP_001942957.1 189346428 6354136 complement(985447..985920) 1 NC_010803.1 PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: cph:Cpha266_1790 2-vinyl bacteriochlorophyllide hydratase; 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD 985920 6354136 Clim_0899 Chlorobium limicola DSM 245 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD YP_001942957.1 985447 R 290315 CDS YP_001942958.1 189346429 6354137 complement(986039..987724) 1 NC_010803.1 PFAM: extracellular solute-binding protein family 5; KEGG: cph:Cpha266_1789 extracellular solute-binding protein, family 5; family 5 extracellular solute-binding protein 987724 6354137 Clim_0900 Chlorobium limicola DSM 245 family 5 extracellular solute-binding protein YP_001942958.1 986039 R 290315 CDS YP_001942959.1 189346430 6354138 987805..988746 1 NC_010803.1 PFAM: glucose-inhibited division protein A; HI0933 family protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aae:aq_500 thioredoxin reductase; thioredoxin-disulfide reductase 988746 6354138 Clim_0901 Chlorobium limicola DSM 245 thioredoxin-disulfide reductase YP_001942959.1 987805 D 290315 CDS YP_001942960.1 189346431 6354139 complement(988753..989490) 1 NC_010803.1 PFAM: LmbE family protein; KEGG: cph:Cpha266_0824 LmbE family protein; LmbE family protein 989490 6354139 Clim_0902 Chlorobium limicola DSM 245 LmbE family protein YP_001942960.1 988753 R 290315 CDS YP_001942961.1 189346432 6354140 989560..990021 1 NC_010803.1 KEGG: cph:Cpha266_0825 deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 990021 6354140 Clim_0903 Chlorobium limicola DSM 245 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut YP_001942961.1 989560 D 290315 CDS YP_001942962.1 189346433 6354141 complement(990018..991457) 1 NC_010803.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: plt:Plut_1417 two component transcriptional regulator, fis family; two component sigma-54 specific Fis family transcriptional regulator 991457 6354141 Clim_0904 Chlorobium limicola DSM 245 two component sigma-54 specific Fis family transcriptional regulator YP_001942962.1 990018 R 290315 CDS YP_001942963.1 189346434 6354142 complement(991580..992176) 1 NC_010803.1 TIGRFAM: chlorosome envelope protein H; KEGG: cph:Cpha266_0826 chlorosome envelope protein H; chlorosome envelope protein H 992176 6354142 Clim_0905 Chlorobium limicola DSM 245 chlorosome envelope protein H YP_001942963.1 991580 R 290315 CDS YP_001942964.1 189346435 6354143 992375..992557 1 NC_010803.1 hypothetical protein 992557 6354143 Clim_0906 Chlorobium limicola DSM 245 hypothetical protein YP_001942964.1 992375 D 290315 CDS YP_001942965.1 189346436 6354144 993039..993185 1 NC_010803.1 KEGG: cph:Cpha266_1360 hypothetical protein; hypothetical protein 993185 6354144 Clim_0907 Chlorobium limicola DSM 245 hypothetical protein YP_001942965.1 993039 D 290315 CDS YP_001942966.1 189346437 6354145 993309..993833 1 NC_010803.1 KEGG: cph:Cpha266_1359 hypothetical protein; hypothetical protein 993833 6354145 Clim_0908 Chlorobium limicola DSM 245 hypothetical protein YP_001942966.1 993309 D 290315 CDS YP_001942967.1 189346438 6354146 993954..994103 1 NC_010803.1 hypothetical protein 994103 6354146 Clim_0909 Chlorobium limicola DSM 245 hypothetical protein YP_001942967.1 993954 D 290315 CDS YP_001942968.1 189346439 6354147 994191..994649 1 NC_010803.1 KEGG: cph:Cpha266_1357 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 994649 6354147 Clim_0910 Chlorobium limicola DSM 245 ECF subfamily RNA polymerase sigma-24 subunit YP_001942968.1 994191 D 290315 CDS YP_001942969.1 189346440 6354148 994646..995767 1 NC_010803.1 PFAM: glycosyl transferase group 1; KEGG: cph:Cpha266_1356 glycosyl transferase, group 1; group 1 glycosyl transferase 995767 6354148 Clim_0911 Chlorobium limicola DSM 245 group 1 glycosyl transferase YP_001942969.1 994646 D 290315 CDS YP_001942970.1 189346441 6354149 995948..996238 1 NC_010803.1 KEGG: cch:Cag_1041 hypothetical protein; hypothetical protein 996238 6354149 Clim_0912 Chlorobium limicola DSM 245 hypothetical protein YP_001942970.1 995948 D 290315 CDS YP_001942971.1 189346442 6354150 996405..996575 1 NC_010803.1 hypothetical protein 996575 6354150 Clim_0913 Chlorobium limicola DSM 245 hypothetical protein YP_001942971.1 996405 D 290315 CDS YP_001942972.1 189346443 6354151 complement(996661..997968) 1 NC_010803.1 PFAM: glycosyl transferase family 2; KEGG: cph:Cpha266_0827 glycosyl transferase, family 2; family 2 glycosyl transferase 997968 6354151 Clim_0914 Chlorobium limicola DSM 245 family 2 glycosyl transferase YP_001942972.1 996661 R 290315 CDS YP_001942973.1 189346444 6354152 complement(997965..999020) 1 NC_010803.1 PFAM: Radical SAM domain protein; KEGG: cph:Cpha266_0829 radical SAM domain protein; radical SAM protein 999020 6354152 Clim_0915 Chlorobium limicola DSM 245 radical SAM protein YP_001942973.1 997965 R 290315 CDS YP_001942974.1 189346445 6354153 complement(999392..1000753) 1 NC_010803.1 PFAM: amine oxidase; KEGG: cte:CT1414 zeta-carotene desaturase; Carotene 7,8-desaturase 1000753 6354153 Clim_0916 Chlorobium limicola DSM 245 Carotene 7,8-desaturase YP_001942974.1 999392 R 290315 CDS YP_001942975.1 189346446 6354154 complement(1000886..1001083) 1 NC_010803.1 KEGG: cte:CT1413 hypothetical protein; hypothetical protein 1001083 6354154 Clim_0917 Chlorobium limicola DSM 245 hypothetical protein YP_001942975.1 1000886 R 290315 CDS YP_001942976.1 189346447 6354155 1001336..1001863 1 NC_010803.1 PFAM: regulatory protein AsnC/Lrp family; regulatory protein MarR; KEGG: cph:Cpha266_0831 AsnC family transcriptional regulator; AsnC family transcriptional regulator 1001863 6354155 Clim_0918 Chlorobium limicola DSM 245 AsnC family transcriptional regulator YP_001942976.1 1001336 D 290315 CDS YP_001942977.1 189346448 6354156 1001931..1004069 1 NC_010803.1 PFAM: glutamine synthetase catalytic region; KEGG: cph:Cpha266_0832 glutamine synthetase, catalytic region; glutamine synthetase 1004069 6354156 Clim_0919 Chlorobium limicola DSM 245 glutamine synthetase YP_001942977.1 1001931 D 290315 CDS YP_001942978.1 189346449 6354157 complement(1004135..1004554) 1 NC_010803.1 PFAM: protein of unknown function UPF0047; KEGG: cph:Cpha266_0833 protein of unknown function UPF0047; hypothetical protein 1004554 6354157 Clim_0920 Chlorobium limicola DSM 245 hypothetical protein YP_001942978.1 1004135 R 290315 CDS YP_001942979.1 189346450 6354158 1004706..1004966 1 NC_010803.1 KEGG: cph:Cpha266_1156 short-chain dehydrogenase/reductase SDR; hypothetical protein 1004966 6354158 Clim_0921 Chlorobium limicola DSM 245 hypothetical protein YP_001942979.1 1004706 D 290315 CDS YP_001942980.1 189346451 6354159 1005048..1005578 1 NC_010803.1 KEGG: cph:Cpha266_1487 protein of unknown function DUF1568; hypothetical protein 1005578 6354159 Clim_0922 Chlorobium limicola DSM 245 hypothetical protein YP_001942980.1 1005048 D 290315 CDS YP_001942981.1 189346452 6354160 complement(1005838..1006113) 1 NC_010803.1 KEGG: cte:CT0582 hypothetical protein; hypothetical protein 1006113 6354160 Clim_0923 Chlorobium limicola DSM 245 hypothetical protein YP_001942981.1 1005838 R 290315 CDS YP_001942982.1 189346453 6354161 complement(1006124..1006384) 1 NC_010803.1 KEGG: dol:Dole_1478 hypothetical protein; hypothetical protein 1006384 6354161 Clim_0924 Chlorobium limicola DSM 245 hypothetical protein YP_001942982.1 1006124 R 290315 CDS YP_001942983.1 189346454 6354162 1006567..1007577 1 NC_010803.1 PFAM: protein of unknown function DUF1568; KEGG: cph:Cpha266_1487 protein of unknown function DUF1568; hypothetical protein 1007577 6354162 Clim_0925 Chlorobium limicola DSM 245 hypothetical protein YP_001942983.1 1006567 D 290315 CDS YP_001942984.1 189346455 6354163 complement(1007635..1008843) 1 NC_010803.1 KEGG: gme:Gmet_1336 hypothetical protein; hypothetical protein 1008843 6354163 Clim_0926 Chlorobium limicola DSM 245 hypothetical protein YP_001942984.1 1007635 R 290315 CDS YP_001942985.1 189346456 6354164 1009061..1009684 1 NC_010803.1 KEGG: cph:Cpha266_2054 CRISPR-associated protein Cas1; CRISPR-associated protein Cas1 1009684 6354164 Clim_0927 Chlorobium limicola DSM 245 CRISPR-associated protein Cas1 YP_001942985.1 1009061 D 290315 CDS YP_001942986.1 189346457 6354165 1012342..1012626 1 NC_010803.1 TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: cph:Cpha266_2055 CRISPR-associated protein Cas2; CRISPR-associated protein Cas2 1012626 6354165 Clim_0928 Chlorobium limicola DSM 245 CRISPR-associated protein Cas2 YP_001942986.1 1012342 D 290315 CDS YP_001942987.1 189346458 6354166 1012746..1014941 1 NC_010803.1 TIGRFAM: CRISPR-associated protein Cas1; PFAM: RNA-directed DNA polymerase (Reverse transcriptase); protein of unknown function DUF48; KEGG: cph:Cpha266_2054 CRISPR-associated protein Cas1; CRISPR-associated protein Cas1 1014941 6354166 Clim_0929 Chlorobium limicola DSM 245 CRISPR-associated protein Cas1 YP_001942987.1 1012746 D 290315 CDS YP_001942988.1 189346459 6354167 1017692..1018687 1 NC_010803.1 TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; KEGG: pth:PTH_0707 hypothetical protein; Cmr1 family CRISPR-associated RAMP protein 1018687 6354167 Clim_0930 Chlorobium limicola DSM 245 Cmr1 family CRISPR-associated RAMP protein YP_001942988.1 1017692 D 290315 CDS YP_001942989.1 189346460 6354168 1018684..1019955 1 NC_010803.1 PFAM: protein of unknown function DUF324; KEGG: mma:MM_3357 hypothetical protein; hypothetical protein 1019955 6354168 Clim_0931 Chlorobium limicola DSM 245 hypothetical protein YP_001942989.1 1018684 D 290315 CDS YP_001942990.1 189346461 6354169 1019952..1022768 1 NC_010803.1 TIGRFAM: CRISPR-associated protein, Csx11 family; KEGG: rca:Rcas_4241 CRISPR-associated protein Csx11; CRISPR-associated protein, Csx11 family 1022768 6354169 Clim_0932 Chlorobium limicola DSM 245 CRISPR-associated protein, Csx11 family YP_001942990.1 1019952 D 290315 CDS YP_001942991.1 189346462 6354170 1022761..1023753 1 NC_010803.1 TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; PFAM: protein of unknown function DUF324; KEGG: pth:PTH_0712 hypothetical protein; Cmr4 family CRISPR-associated RAMP protein 1023753 6354170 Clim_0933 Chlorobium limicola DSM 245 Cmr4 family CRISPR-associated RAMP protein YP_001942991.1 1022761 D 290315 CDS YP_001942992.1 189346463 6354171 1023750..1024124 1 NC_010803.1 KEGG: rrs:RoseRS_2588 hypothetical protein; hypothetical protein 1024124 6354171 Clim_0934 Chlorobium limicola DSM 245 hypothetical protein YP_001942992.1 1023750 D 290315 CDS YP_001942993.1 189346464 6354172 1024124..1024927 1 NC_010803.1 KEGG: rca:Rcas_4238 hypothetical protein; hypothetical protein 1024927 6354172 Clim_0935 Chlorobium limicola DSM 245 hypothetical protein YP_001942993.1 1024124 D 290315 CDS YP_001942994.1 189346465 6354173 1024986..1026407 1 NC_010803.1 KEGG: cbh:CLC_2119 hypothetical protein; hypothetical protein 1026407 6354173 Clim_0936 Chlorobium limicola DSM 245 hypothetical protein YP_001942994.1 1024986 D 290315 CDS YP_001942995.1 189346466 6354176 1027957..1028250 1 NC_010803.1 PFAM: transposase IS3/IS911 family protein; KEGG: cph:Cpha266_2113 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1028250 6354176 Clim_0939 Chlorobium limicola DSM 245 transposase IS3/IS911 family protein YP_001942995.1 1027957 D 290315 CDS YP_001942996.1 189346467 6353724 1028247..1029167 1 NC_010803.1 PFAM: Integrase catalytic region; KEGG: cph:Cpha266_1954 integrase, catalytic region; integrase catalytic subunit 1029167 6353724 Clim_0940 Chlorobium limicola DSM 245 integrase catalytic subunit YP_001942996.1 1028247 D 290315 CDS YP_001942997.1 189346468 6355391 1032492..1032644 1 NC_010803.1 hypothetical protein 1032644 6355391 Clim_0942 Chlorobium limicola DSM 245 hypothetical protein YP_001942997.1 1032492 D 290315 CDS YP_001942998.1 189346469 6355392 1032705..1033211 1 NC_010803.1 KEGG: cph:Cpha266_0834 hypothetical protein; hypothetical protein 1033211 6355392 Clim_0943 Chlorobium limicola DSM 245 hypothetical protein YP_001942998.1 1032705 D 290315 CDS YP_001942999.1 189346470 6355393 1033239..1034039 1 NC_010803.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 1034039 6355393 Clim_0944 Chlorobium limicola DSM 245 pantothenate kinase YP_001942999.1 1033239 D 290315 CDS YP_001943000.1 189346471 6355394 complement(1034020..1035120) 1 NC_010803.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 1035120 aroB 6355394 aroB Chlorobium limicola DSM 245 3-dehydroquinate synthase YP_001943000.1 1034020 R 290315 CDS YP_001943001.1 189346472 6355395 complement(1035117..1035716) 1 NC_010803.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 1035716 aroK 6355395 aroK Chlorobium limicola DSM 245 shikimate kinase YP_001943001.1 1035117 R 290315 CDS YP_001943002.1 189346473 6355396 complement(1035843..1038065) 1 NC_010803.1 KEGG: cph:Cpha266_0838 helicase, RecD/TraA family; TIGRFAM: helicase, RecD/TraA family; PFAM: nucleic acid binding OB-fold tRNA/helicase-type; SMART: AAA ATPase; recombinase D 1038065 6355396 Clim_0947 Chlorobium limicola DSM 245 recombinase D YP_001943002.1 1035843 R 290315 CDS YP_001943003.1 189346474 6355397 1038202..1038903 1 NC_010803.1 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase 1038903 6355397 Clim_0948 Chlorobium limicola DSM 245 glutamine amidotransferase YP_001943003.1 1038202 D 290315 CDS YP_001943004.1 189346475 6355398 1039027..1039656 1 NC_010803.1 hypothetical protein 1039656 6355398 Clim_0949 Chlorobium limicola DSM 245 hypothetical protein YP_001943004.1 1039027 D 290315 CDS YP_001943005.1 189346476 6355399 1039817..1040497 1 NC_010803.1 TIGRFAM: yecA family protein; KEGG: cch:Cag_0098 YgfB and YecA; yecA family protein 1040497 6355399 Clim_0950 Chlorobium limicola DSM 245 yecA family protein YP_001943005.1 1039817 D 290315 CDS YP_001943006.1 189346477 6355400 1040523..1041353 1 NC_010803.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cph:Cpha266_0189 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1041353 6355400 Clim_0951 Chlorobium limicola DSM 245 short-chain dehydrogenase/reductase SDR YP_001943006.1 1040523 D 290315 CDS YP_001943007.1 189346478 6355401 complement(1041348..1042493) 1 NC_010803.1 PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; KEGG: cph:Cpha266_0696 coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein 1042493 6355401 Clim_0952 Chlorobium limicola DSM 245 coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein YP_001943007.1 1041348 R 290315 CDS YP_001943008.1 189346479 6355402 complement(1042663..1043256) 1 NC_010803.1 PFAM: protein of unknown function DUF218; KEGG: cph:Cpha266_0844 protein of unknown function DUF218; hypothetical protein 1043256 6355402 Clim_0953 Chlorobium limicola DSM 245 hypothetical protein YP_001943008.1 1042663 R 290315 CDS YP_001943009.1 189346480 6355403 1043704..1043859 1 NC_010803.1 hypothetical protein 1043859 6355403 Clim_0954 Chlorobium limicola DSM 245 hypothetical protein YP_001943009.1 1043704 D 290315 CDS YP_001943010.1 189346481 6355404 1044094..1045317 1 NC_010803.1 PFAM: conserved hypothetical protein; KEGG: cph:Cpha266_1074 uncharacterised conserved protein UCP016719; hypothetical protein 1045317 6355404 Clim_0955 Chlorobium limicola DSM 245 hypothetical protein YP_001943010.1 1044094 D 290315 CDS YP_001943011.1 189346482 6355405 complement(1045345..1046508) 1 NC_010803.1 catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; cyclopropane-fatty-acyl-phospholipid synthase 1046508 6355405 Clim_0956 Chlorobium limicola DSM 245 cyclopropane-fatty-acyl-phospholipid synthase YP_001943011.1 1045345 R 290315 CDS YP_001943012.1 189346483 6355406 complement(1046560..1047696) 1 NC_010803.1 catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; cyclopropane-fatty-acyl-phospholipid synthase 1047696 6355406 Clim_0957 Chlorobium limicola DSM 245 cyclopropane-fatty-acyl-phospholipid synthase YP_001943012.1 1046560 R 290315 CDS YP_001943013.1 189346484 6355407 complement(1047996..1048592) 1 NC_010803.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cte:CT0972 anti-anti-sigma factor; anti-sigma-factor antagonist 1048592 6355407 Clim_0958 Chlorobium limicola DSM 245 anti-sigma-factor antagonist YP_001943013.1 1047996 R 290315 CDS YP_001943014.1 189346485 6355408 complement(1048742..1049692) 1 NC_010803.1 KEGG: cph:Cpha266_1081 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase 1049692 6355408 Clim_0959 Chlorobium limicola DSM 245 tRNA delta(2)-isopentenylpyrophosphate transferase YP_001943014.1 1048742 R 290315 CDS YP_001943015.1 189346486 6355409 complement(1049706..1050299) 1 NC_010803.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: cph:Cpha266_1082 maf protein; maf protein 1050299 6355409 Clim_0960 Chlorobium limicola DSM 245 maf protein YP_001943015.1 1049706 R 290315 CDS YP_001943016.1 189346487 6355410 complement(1050301..1052064) 1 NC_010803.1 PFAM: Na+/solute symporter; KEGG: cph:Cpha266_1083 Na+/solute symporter; Na+/solute symporter 1052064 6355410 Clim_0961 Chlorobium limicola DSM 245 Na+/solute symporter YP_001943016.1 1050301 R 290315 CDS YP_001943017.1 189346488 6355411 complement(1052143..1053054) 1 NC_010803.1 PFAM: PfkB domain protein; KEGG: cph:Cpha266_1084 PfkB domain protein; PfkB domain-containing protein 1053054 6355411 Clim_0962 Chlorobium limicola DSM 245 PfkB domain-containing protein YP_001943017.1 1052143 R 290315 CDS YP_001943018.1 189346489 6355412 complement(1053110..1055026) 1 NC_010803.1 KEGG: cph:Cpha266_1085 alpha-amylase family protein; alpha-amylase family protein 1055026 6355412 Clim_0963 Chlorobium limicola DSM 245 alpha-amylase family protein YP_001943018.1 1053110 R 290315 CDS YP_001943019.1 189346490 6355413 1055167..1055898 1 NC_010803.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 1055898 truA 6355413 truA Chlorobium limicola DSM 245 tRNA pseudouridine synthase A YP_001943019.1 1055167 D 290315 CDS YP_001943020.1 189346491 6355414 1056063..1057775 1 NC_010803.1 PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; KEGG: cph:Cpha266_1087 lytic transglycosylase, catalytic; lytic transglycosylase 1057775 6355414 Clim_0965 Chlorobium limicola DSM 245 lytic transglycosylase YP_001943020.1 1056063 D 290315 CDS YP_001943021.1 189346492 6355415 1057977..1059170 1 NC_010803.1 KEGG: cte:CT0980 ArsA ATPase family protein; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; arsenite-activated ATPase ArsA 1059170 6355415 Clim_0966 Chlorobium limicola DSM 245 arsenite-activated ATPase ArsA YP_001943021.1 1057977 D 290315 CDS YP_001943022.1 189346493 6355416 complement(1059256..1060836) 1 NC_010803.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 1060836 6355416 Clim_0967 Chlorobium limicola DSM 245 D-3-phosphoglycerate dehydrogenase YP_001943022.1 1059256 R 290315 CDS YP_001943023.1 189346494 6355417 1061134..1062195 1 NC_010803.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1062195 6355417 Clim_0968 Chlorobium limicola DSM 245 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001943023.1 1061134 D 290315 CDS YP_001943024.1 189346495 6355418 1062225..1062428 1 NC_010803.1 KEGG: cph:Cpha266_1091 hypothetical protein; hypothetical protein 1062428 6355418 Clim_0969 Chlorobium limicola DSM 245 hypothetical protein YP_001943024.1 1062225 D 290315 CDS YP_001943025.1 189346496 6355419 1062515..1063648 1 NC_010803.1 KEGG: cph:Cpha266_1092 hypothetical protein; hypothetical protein 1063648 6355419 Clim_0970 Chlorobium limicola DSM 245 hypothetical protein YP_001943025.1 1062515 D 290315 CDS YP_001943026.1 189346497 6355420 complement(1063752..1064417) 1 NC_010803.1 KEGG: cph:Cpha266_1093 hypothetical protein; hypothetical protein 1064417 6355420 Clim_0971 Chlorobium limicola DSM 245 hypothetical protein YP_001943026.1 1063752 R 290315 CDS YP_001943027.1 189346498 6355421 complement(1064520..1064861) 1 NC_010803.1 PFAM: nitrogen regulatory protein P-II; KEGG: plt:Plut_1164 nitrogen regulatory protein P-II (GlnB, GlnK); nitrogen regulatory protein P-II 1064861 6355421 Clim_0972 Chlorobium limicola DSM 245 nitrogen regulatory protein P-II YP_001943027.1 1064520 R 290315 CDS YP_001943028.1 189346499 6355422 complement(1064883..1066208) 1 NC_010803.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: plt:Plut_1163 ammonium transporter; ammonium transporter 1066208 6355422 Clim_0973 Chlorobium limicola DSM 245 ammonium transporter YP_001943028.1 1064883 R 290315 CDS YP_001943029.1 189346500 6355423 1066451..1066864 1 NC_010803.1 KEGG: cph:Cpha266_1094 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor, serine/threonine protein kinase 1066864 6355423 Clim_0974 Chlorobium limicola DSM 245 anti-sigma regulatory factor, serine/threonine protein kinase YP_001943029.1 1066451 D 290315 CDS YP_001943030.1 189346501 6355424 1067042..1068691 1 NC_010803.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 1068691 pgi 6355424 pgi Chlorobium limicola DSM 245 glucose-6-phosphate isomerase YP_001943030.1 1067042 D 290315 CDS YP_001943031.1 189346502 6355425 complement(1068676..1069716) 1 NC_010803.1 PFAM: ApbE family lipoprotein; KEGG: pvi:Cvib_0792 ApbE family lipoprotein; ApbE family lipoprotein 1069716 6355425 Clim_0976 Chlorobium limicola DSM 245 ApbE family lipoprotein YP_001943031.1 1068676 R 290315 CDS YP_001943032.1 189346503 6355426 1069943..1072246 1 NC_010803.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; monovalent cation/H+ antiporter subunit A 1072246 6355426 Clim_0977 Chlorobium limicola DSM 245 monovalent cation/H+ antiporter subunit A YP_001943032.1 1069943 D 290315 CDS YP_001943033.1 189346504 6355427 1072246..1072662 1 NC_010803.1 subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit B 1072662 6355427 Clim_0978 Chlorobium limicola DSM 245 monovalent cation/H+ antiporter subunit B YP_001943033.1 1072246 D 290315 CDS YP_001943034.1 189346505 6355428 1072659..1073018 1 NC_010803.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit C 1073018 6355428 Clim_0979 Chlorobium limicola DSM 245 monovalent cation/H+ antiporter subunit C YP_001943034.1 1072659 D 290315 CDS YP_001943035.1 189346506 6355429 1073022..1074530 1 NC_010803.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: pvi:Cvib_1260 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 1074530 6355429 Clim_0980 Chlorobium limicola DSM 245 NADH dehydrogenase (quinone) YP_001943035.1 1073022 D 290315 CDS YP_001943036.1 189346507 6355430 1074527..1075000 1 NC_010803.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit E 1075000 6355430 Clim_0981 Chlorobium limicola DSM 245 monovalent cation/H+ antiporter subunit E YP_001943036.1 1074527 D 290315 CDS YP_001943037.1 189346508 6355431 1074997..1075269 1 NC_010803.1 PFAM: multiple resistance and pH regulation protein F; KEGG: pvi:Cvib_1262 multiple resistance and pH regulation protein F; multiple resistance and pH regulation protein F 1075269 6355431 Clim_0982 Chlorobium limicola DSM 245 multiple resistance and pH regulation protein F YP_001943037.1 1074997 D 290315 CDS YP_001943038.1 189346509 6355432 1075266..1075613 1 NC_010803.1 TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: pvi:Cvib_1263 monovalent cation/proton antiporter, MnhG/PhaG subunit; monovalent cation/proton antiporter subunit MnhG/PhaG 1075613 6355432 Clim_0983 Chlorobium limicola DSM 245 monovalent cation/proton antiporter subunit MnhG/PhaG YP_001943038.1 1075266 D 290315 CDS YP_001943039.1 189346510 6355433 complement(1075673..1076251) 1 NC_010803.1 TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: pvi:Cvib_0793 electron transport complex, RnfABCDGE type, A subunit; RnfABCDGE type electron transport complex subunit A 1076251 6355433 Clim_0984 Chlorobium limicola DSM 245 RnfABCDGE type electron transport complex subunit A YP_001943039.1 1075673 R 290315 CDS YP_001943040.1 189346511 6355434 complement(1076248..1076853) 1 NC_010803.1 in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex protein RsxE 1076853 6355434 Clim_0985 Chlorobium limicola DSM 245 electron transport complex protein RsxE YP_001943040.1 1076248 R 290315 CDS YP_001943041.1 189346512 6355435 complement(1076850..1077395) 1 NC_010803.1 TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: plt:Plut_1157 electron transport complex, RnfABCDGE type, G subunit; RnfABCDGE type electron transport complex subunit G 1077395 6355435 Clim_0986 Chlorobium limicola DSM 245 RnfABCDGE type electron transport complex subunit G YP_001943041.1 1076850 R 290315 CDS YP_001943042.1 189346513 6355436 complement(1077392..1078366) 1 NC_010803.1 TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: pvi:Cvib_0796 electron transport complex, RnfABCDGE type, D subunit; RnfABCDGE type electron transport complex subunit D 1078366 6355436 Clim_0987 Chlorobium limicola DSM 245 RnfABCDGE type electron transport complex subunit D YP_001943042.1 1077392 R 290315 CDS YP_001943043.1 189346514 6355437 complement(1078387..1079712) 1 NC_010803.1 TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: pvi:Cvib_0797 electron transport complex, RnfABCDGE type, C subunit; RnfABCDGE type electron transport complex subunit C 1079712 6355437 Clim_0988 Chlorobium limicola DSM 245 RnfABCDGE type electron transport complex subunit C YP_001943043.1 1078387 R 290315 CDS YP_001943044.1 189346515 6355438 complement(1079713..1080552) 1 NC_010803.1 involved in the electron transport chain; in Methanosarcina acetivorans this protein is part of a cluster involved in electron transfer during growth on acetate; ferredoxin 1080552 6355438 Clim_0989 Chlorobium limicola DSM 245 ferredoxin YP_001943044.1 1079713 R 290315 CDS YP_001943045.1 189346516 6355439 complement(1080559..1080951) 1 NC_010803.1 PFAM: Positive regulator of sigma(E) RseC/MucC; KEGG: pvi:Cvib_0799 hypothetical protein; sigma E positive regulator RseC/MucC 1080951 6355439 Clim_0990 Chlorobium limicola DSM 245 sigma E positive regulator RseC/MucC YP_001943045.1 1080559 R 290315 CDS YP_001943046.1 189346517 6355440 complement(1081138..1082442) 1 NC_010803.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1082442 6355440 Clim_0991 Chlorobium limicola DSM 245 adenylosuccinate lyase YP_001943046.1 1081138 R 290315 CDS YP_001943047.1 189346518 6355441 complement(1082530..1083945) 1 NC_010803.1 TIGRFAM: metal dependent phophohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: cte:CT0990 polyA polymerase family protein; polynucleotide adenylyltransferase/metal dependent phosphohydrolase 1083945 6355441 Clim_0992 Chlorobium limicola DSM 245 polynucleotide adenylyltransferase/metal dependent phosphohydrolase YP_001943047.1 1082530 R 290315 CDS YP_001943048.1 189346519 6355442 complement(1083972..1085006) 1 NC_010803.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: cph:Cpha266_1110 oxidoreductase domain protein; oxidoreductase domain-containing protein 1085006 6355442 Clim_0993 Chlorobium limicola DSM 245 oxidoreductase domain-containing protein YP_001943048.1 1083972 R 290315 CDS YP_001943049.1 189346520 6355443 complement(1085036..1086310) 1 NC_010803.1 PFAM: major facilitator superfamily MFS_1; KEGG: cph:Cpha266_1111 major facilitator superfamily MFS_1; major facilitator superfamily protein 1086310 6355443 Clim_0994 Chlorobium limicola DSM 245 major facilitator superfamily protein YP_001943049.1 1085036 R 290315 CDS YP_001943050.1 189346521 6355444 complement(1086414..1087280) 1 NC_010803.1 PFAM: periplasmic binding protein; KEGG: cch:Cag_0726 ABC transporter, periplasmic substrate-binding protein; periplasmic binding protein 1087280 6355444 Clim_0995 Chlorobium limicola DSM 245 periplasmic binding protein YP_001943050.1 1086414 R 290315 CDS YP_001943051.1 189346522 6355445 complement(1087267..1087668) 1 NC_010803.1 PFAM: NUDIX hydrolase; KEGG: cch:Cag_0727 NUDIX/MutT family protein; NUDIX hydrolase 1087668 6355445 Clim_0996 Chlorobium limicola DSM 245 NUDIX hydrolase YP_001943051.1 1087267 R 290315 CDS YP_001943052.1 189346523 6355446 1087914..1088279 1 NC_010803.1 KEGG: cch:Cag_1259 hypothetical protein; hypothetical protein 1088279 6355446 Clim_0997 Chlorobium limicola DSM 245 hypothetical protein YP_001943052.1 1087914 D 290315 CDS YP_001943053.1 189346524 6355447 1088340..1088927 1 NC_010803.1 PFAM: helix-turn-helix domain protein; KEGG: cch:Cag_1260 XRE family transcriptional regulator; XRE family transcriptional regulator 1088927 6355447 Clim_0998 Chlorobium limicola DSM 245 XRE family transcriptional regulator YP_001943053.1 1088340 D 290315 CDS YP_001943054.1 189346525 6355448 1089153..1089626 1 NC_010803.1 PFAM: cyclase/dehydrase; KEGG: cte:CT0933 hypothetical protein; cyclase/dehydrase 1089626 6355448 Clim_0999 Chlorobium limicola DSM 245 cyclase/dehydrase YP_001943054.1 1089153 D 290315 CDS YP_001943055.1 189346526 6355449 1089638..1091317 1 NC_010803.1 PFAM: Na+/Picotransporter; KEGG: cph:Cpha266_1114 Na+/Pi-cotransporter; Na+/Picotransporter 1091317 6355449 Clim_1000 Chlorobium limicola DSM 245 Na+/Picotransporter YP_001943055.1 1089638 D 290315 CDS YP_001943056.1 189346527 6355450 1092108..1093994 1 NC_010803.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pca:Pcar_2970 TonB-dependent receptor protein; TonB-dependent receptor 1093994 6355450 Clim_1001 Chlorobium limicola DSM 245 TonB-dependent receptor YP_001943056.1 1092108 D 290315 CDS YP_001943057.1 189346528 6355451 1094062..1094376 1 NC_010803.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cte:CT0409 ferredoxin, 4Fe-4S; 4Fe-4S ferredoxin 1094376 6355451 Clim_1002 Chlorobium limicola DSM 245 4Fe-4S ferredoxin YP_001943057.1 1094062 D 290315 CDS YP_001943058.1 189346529 6355452 1094425..1095642 1 NC_010803.1 PFAM: periplasmic binding protein; KEGG: cte:CT0410 iron(III) ABC transporter, periplasmic iron-binding protein; periplasmic binding protein 1095642 6355452 Clim_1003 Chlorobium limicola DSM 245 periplasmic binding protein YP_001943058.1 1094425 D 290315 CDS YP_001943059.1 189346530 6355453 1095644..1096738 1 NC_010803.1 PFAM: transport system permease protein; KEGG: cte:CT0411 iron(III) ABC transporter, permease protein; transport system permease 1096738 6355453 Clim_1004 Chlorobium limicola DSM 245 transport system permease YP_001943059.1 1095644 D 290315 CDS YP_001943060.1 189346531 6355454 1096735..1097832 1 NC_010803.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: cte:CT0412 iron(III) ABC transporter, ATP-binding protein; ABC transporter 1097832 6355454 Clim_1005 Chlorobium limicola DSM 245 ABC transporter YP_001943060.1 1096735 D 290315 CDS YP_001943061.1 189346532 6355455 1097829..1099019 1 NC_010803.1 KEGG: cte:CT0413 iron complex transport system substrate-binding protein; iron complex transport system substrate-binding protein 1099019 6355455 Clim_1006 Chlorobium limicola DSM 245 iron complex transport system substrate-binding protein YP_001943061.1 1097829 D 290315 CDS YP_001943062.1 189346533 6355456 1099016..1100176 1 NC_010803.1 PFAM: protein of unknown function DUF105; KEGG: cte:CT0414 hypothetical protein; hypothetical protein 1100176 6355456 Clim_1007 Chlorobium limicola DSM 245 hypothetical protein YP_001943062.1 1099016 D 290315 CDS YP_001943063.1 189346534 6355457 1100164..1101720 1 NC_010803.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: cte:CT0415 carbon-nitrogen hydrolase family protein; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1101720 6355457 Clim_1008 Chlorobium limicola DSM 245 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001943063.1 1100164 D 290315 CDS YP_001943064.1 189346535 6355458 1101717..1102538 1 NC_010803.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: cte:CT0390 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 1102538 6355458 Clim_1009 Chlorobium limicola DSM 245 uroporphyrin-III C-methyltransferase YP_001943064.1 1101717 D 290315 CDS YP_001943065.1 189346536 6355459 1102538..1103464 1 NC_010803.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; anaerobic cobalt chelatase; KEGG: cte:CT0389 cobalt chelatase CbiK; anaerobic cobalt chelatase 1103464 6355459 Clim_1010 Chlorobium limicola DSM 245 anaerobic cobalt chelatase YP_001943065.1 1102538 D 290315 CDS YP_001943066.1 189346537 6355460 1103457..1104215 1 NC_010803.1 TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: cte:CT0388 precorrin-2 C20-methyltransferase; precorrin-2 C(20)-methyltransferase 1104215 6355460 Clim_1011 Chlorobium limicola DSM 245 precorrin-2 C(20)-methyltransferase YP_001943066.1 1103457 D 290315 CDS YP_001943067.1 189346538 6355461 1104217..1105635 1 NC_010803.1 TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Precorrin-8X methylmutase CbiC/CobH; KEGG: cte:CT0387 precorrin-3B C17-methyltransferase/precorrin-8X methylmutase; precorrin-3B C(17)-methyltransferase 1105635 6355461 Clim_1012 Chlorobium limicola DSM 245 precorrin-3B C(17)-methyltransferase YP_001943067.1 1104217 D 290315 CDS YP_001943068.1 189346539 6355462 1105628..1106842 1 NC_010803.1 KEGG: cte:CT0386 precorrin-6y C5,15-methyltransferase, decarboxylating; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6y C5,15-methyltransferase subunit CbiE 1106842 6355462 Clim_1013 Chlorobium limicola DSM 245 precorrin-6y C5,15-methyltransferase subunit CbiE YP_001943068.1 1105628 D 290315 CDS YP_001943069.1 189346540 6355463 1106839..1108719 1 NC_010803.1 KEGG: cte:CT0385 precorrin-4 C11-methyltransferase/cobalamin biosynthesis protein; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiG protein; precorrin-4 C(11)-methyltransferase 1108719 6355463 Clim_1014 Chlorobium limicola DSM 245 precorrin-4 C(11)-methyltransferase YP_001943069.1 1106839 D 290315 CDS YP_001943070.1 189346541 6355465 1110608..1111618 1 NC_010803.1 PFAM: xylose isomerase; KEGG: cte:CT0416 hypothetical protein; xylose isomerase 1111618 6355465 Clim_1016 Chlorobium limicola DSM 245 xylose isomerase YP_001943070.1 1110608 D 290315 CDS YP_001943071.1 189346542 6355466 1111615..1112652 1 NC_010803.1 PFAM: Radical SAM domain protein; KEGG: cte:CT0417 AslB/AtsB family protein; radical SAM protein 1112652 6355466 Clim_1017 Chlorobium limicola DSM 245 radical SAM protein YP_001943071.1 1111615 D 290315 CDS YP_001943072.1 189346543 6355467 1112649..1116428 1 NC_010803.1 PFAM: CobN/magnesium chelatase; KEGG: cte:CT0418 cobalamin biosynthesis protein CobN; cobaltochelatase 1116428 6355467 Clim_1018 Chlorobium limicola DSM 245 cobaltochelatase YP_001943072.1 1112649 D 290315 CDS YP_001943073.1 189346544 6355468 1116425..1118143 1 NC_010803.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ppd:Ppro_1260 TonB-dependent receptor; TonB-dependent receptor 1118143 6355468 Clim_1019 Chlorobium limicola DSM 245 TonB-dependent receptor YP_001943073.1 1116425 D 290315 CDS YP_001943074.1 189346545 6355469 1118152..1120113 1 NC_010803.1 KEGG: cte:CT0420 magnesium-chelatase, subunit D/I family; TIGRFAM: cobaltochelatase subunit; PFAM: magnesium chelatase ChlI subunit; von Willebrand factor type A; ATPase associated with various cellular activities AAA_5; cobaltochelatase subunit 1120113 6355469 Clim_1020 Chlorobium limicola DSM 245 cobaltochelatase subunit YP_001943074.1 1118152 D 290315 CDS YP_001943075.1 189346546 6355470 1120110..1121153 1 NC_010803.1 KEGG: cte:CT0421 magnesium-chelatase, subunit I family; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; magnesium chelatase 1121153 6355470 Clim_1021 Chlorobium limicola DSM 245 magnesium chelatase YP_001943075.1 1120110 D 290315 CDS YP_001943076.1 189346547 6354485 1121174..1124926 1 NC_010803.1 PFAM: CobN/magnesium chelatase; KEGG: cte:CT0422 CobN protein; cobaltochelatase 1124926 6354485 Clim_1022 Chlorobium limicola DSM 245 cobaltochelatase YP_001943076.1 1121174 D 290315 CDS YP_001943077.1 189346548 6353725 1125498..1127807 1 NC_010803.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cte:CT0423 receptor; TonB-dependent receptor plug 1127807 6353725 Clim_1023 Chlorobium limicola DSM 245 TonB-dependent receptor plug YP_001943077.1 1125498 D 290315 CDS YP_001943078.1 189346549 6353726 1127811..1129004 1 NC_010803.1 KEGG: cte:CT0413 iron complex transport system substrate-binding protein; iron complex transport system substrate-binding protein 1129004 6353726 Clim_1024 Chlorobium limicola DSM 245 iron complex transport system substrate-binding protein YP_001943078.1 1127811 D 290315 CDS YP_001943079.1 189346550 6353727 complement(1129199..1130710) 1 NC_010803.1 KEGG: azo:azo3307 probable coenzyme A transferase; TIGRFAM: succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase; succinate CoA transferase 1130710 6353727 Clim_1025 Chlorobium limicola DSM 245 succinate CoA transferase YP_001943079.1 1129199 R 290315 CDS YP_001943080.1 189346551 6353728 1131113..1131973 1 NC_010803.1 PFAM: protein of unknown function DUF399; KEGG: bfs:BF3448 hypothetical protein; hypothetical protein 1131973 6353728 Clim_1026 Chlorobium limicola DSM 245 hypothetical protein YP_001943080.1 1131113 D 290315 CDS YP_001943081.1 189346552 6353729 complement(1132025..1132438) 1 NC_010803.1 KEGG: cph:Cpha266_0191 hypothetical protein; hypothetical protein 1132438 6353729 Clim_1027 Chlorobium limicola DSM 245 hypothetical protein YP_001943081.1 1132025 R 290315 CDS YP_001943082.1 189346553 6353730 1132762..1134117 1 NC_010803.1 KEGG: cph:Cpha266_2262 hypothetical protein; hypothetical protein 1134117 6353730 Clim_1028 Chlorobium limicola DSM 245 hypothetical protein YP_001943082.1 1132762 D 290315 CDS YP_001943083.1 189346554 6353731 1134140..1135759 1 NC_010803.1 KEGG: cph:Cpha266_2261 DnaK like protein; DnaK like protein 1135759 6353731 Clim_1029 Chlorobium limicola DSM 245 DnaK like protein YP_001943083.1 1134140 D 290315 CDS YP_001943084.1 189346555 6353732 1135937..1137475 1 NC_010803.1 PFAM: ATPase AAA; SMART: AAA ATPase; KEGG: cph:Cpha266_2260 AAA ATPase, central domain protein; ATPase AAA 1137475 6353732 Clim_1030 Chlorobium limicola DSM 245 ATPase AAA YP_001943084.1 1135937 D 290315 CDS YP_001943085.1 189346556 6353733 1137631..1138428 1 NC_010803.1 PFAM: protein of unknown function DUF323; KEGG: cph:Cpha266_2259 protein of unknown function DUF323; hypothetical protein 1138428 6353733 Clim_1031 Chlorobium limicola DSM 245 hypothetical protein YP_001943085.1 1137631 D 290315 CDS YP_001943086.1 189346557 6353734 1138590..1138784 1 NC_010803.1 KEGG: cte:CT1578 integrase/recombinase-related protein; integrase/recombinase-like protein 1138784 6353734 Clim_1032 Chlorobium limicola DSM 245 integrase/recombinase-like protein YP_001943086.1 1138590 D 290315 CDS YP_001943087.1 189346558 6353735 1138935..1140017 1 NC_010803.1 KEGG: azc:AZC_0339 hypothetical protein; hypothetical protein 1140017 6353735 Clim_1033 Chlorobium limicola DSM 245 hypothetical protein YP_001943087.1 1138935 D 290315 CDS YP_001943088.1 189346559 6353736 1140211..1141089 1 NC_010803.1 KEGG: aeh:Mlg_0384 hypothetical protein; hypothetical protein 1141089 6353736 Clim_1034 Chlorobium limicola DSM 245 hypothetical protein YP_001943088.1 1140211 D 290315 CDS YP_001943089.1 189346560 6353737 1141067..1141636 1 NC_010803.1 KEGG: mmw:Mmwyl1_1516 hypothetical protein; hypothetical protein 1141636 6353737 Clim_1035 Chlorobium limicola DSM 245 hypothetical protein YP_001943089.1 1141067 D 290315 CDS YP_001943090.1 189346561 6353738 1142237..1143250 1 NC_010803.1 PFAM: Patatin; KEGG: hiq:CGSHiGG_03920 patatin; patatin 1143250 6353738 Clim_1036 Chlorobium limicola DSM 245 patatin YP_001943090.1 1142237 D 290315 CDS YP_001943091.1 189346562 6353739 1143262..1144137 1 NC_010803.1 hypothetical protein 1144137 6353739 Clim_1037 Chlorobium limicola DSM 245 hypothetical protein YP_001943091.1 1143262 D 290315 CDS YP_001943092.1 189346563 6353740 1144139..1145389 1 NC_010803.1 hypothetical protein 1145389 6353740 Clim_1038 Chlorobium limicola DSM 245 hypothetical protein YP_001943092.1 1144139 D 290315 CDS YP_001943093.1 189346564 6353741 1145526..1145657 1 NC_010803.1 hypothetical protein 1145657 6353741 Clim_1039 Chlorobium limicola DSM 245 hypothetical protein YP_001943093.1 1145526 D 290315 CDS YP_001943094.1 189346565 6353742 complement(1146115..1146243) 1 NC_010803.1 hypothetical protein 1146243 6353742 Clim_1040 Chlorobium limicola DSM 245 hypothetical protein YP_001943094.1 1146115 R 290315 CDS YP_001943095.1 189346566 6353743 1146473..1146622 1 NC_010803.1 hypothetical protein 1146622 6353743 Clim_1041 Chlorobium limicola DSM 245 hypothetical protein YP_001943095.1 1146473 D 290315 CDS YP_001943096.1 189346567 6353744 1146693..1146932 1 NC_010803.1 KEGG: cte:CT1927 hypothetical protein; hypothetical protein 1146932 6353744 Clim_1042 Chlorobium limicola DSM 245 hypothetical protein YP_001943096.1 1146693 D 290315 CDS YP_001943097.1 189346568 6353745 1146985..1147167 1 NC_010803.1 KEGG: cph:Cpha266_2199 hypothetical protein; hypothetical protein 1147167 6353745 Clim_1043 Chlorobium limicola DSM 245 hypothetical protein YP_001943097.1 1146985 D 290315 CDS YP_001943098.1 189346569 6353746 1147792..1148739 1 NC_010803.1 PFAM: HpcH/HpaI aldolase; KEGG: cph:Cpha266_2198 HpcH/HpaI aldolase; HpcH/HpaI aldolase 1148739 6353746 Clim_1044 Chlorobium limicola DSM 245 HpcH/HpaI aldolase YP_001943098.1 1147792 D 290315 CDS YP_001943099.1 189346570 6353747 1148985..1149389 1 NC_010803.1 KEGG: cph:Cpha266_2231 hypothetical protein; hypothetical protein 1149389 6353747 Clim_1045 Chlorobium limicola DSM 245 hypothetical protein YP_001943099.1 1148985 D 290315 CDS YP_001943100.1 189346571 6353750 1151042..1151320 1 NC_010803.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: cph:Cpha266_2187 prevent-host-death family protein; prevent-host-death family protein 1151320 6353750 Clim_1048 Chlorobium limicola DSM 245 prevent-host-death family protein YP_001943100.1 1151042 D 290315 CDS YP_001943101.1 189346572 6353752 complement(1151456..1153018) 1 NC_010803.1 PFAM: transposase IS4 family protein; KEGG: amt:Amet_3130 transposase, IS4 family protein; transposase IS4 family protein 1153018 6353752 Clim_1050 Chlorobium limicola DSM 245 transposase IS4 family protein YP_001943101.1 1151456 R 290315 CDS YP_001943102.1 189346573 6353753 complement(1153542..1153670) 1 NC_010803.1 hypothetical protein 1153670 6353753 Clim_1051 Chlorobium limicola DSM 245 hypothetical protein YP_001943102.1 1153542 R 290315 CDS YP_001943103.1 189346574 6353755 complement(1153920..1154522) 1 NC_010803.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: aba:Acid345_3867 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 1154522 6353755 Clim_1053 Chlorobium limicola DSM 245 lysine exporter protein LysE/YggA YP_001943103.1 1153920 R 290315 CDS YP_001943104.1 189346575 6353757 1154853..1155500 1 NC_010803.1 KEGG: pnu:Pnuc_0548 hypothetical protein; hypothetical protein 1155500 6353757 Clim_1055 Chlorobium limicola DSM 245 hypothetical protein YP_001943104.1 1154853 D 290315 CDS YP_001943105.1 189346576 6353759 1159062..1161227 1 NC_010803.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 1161227 6353759 Clim_1057 Chlorobium limicola DSM 245 anaerobic ribonucleoside triphosphate reductase YP_001943105.1 1159062 D 290315 CDS YP_001943106.1 189346577 6353760 1161227..1161961 1 NC_010803.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; KEGG: pvi:Cvib_0808 anaerobic ribonucleoside-triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein 1161961 6353760 Clim_1058 Chlorobium limicola DSM 245 anaerobic ribonucleoside-triphosphate reductase activating protein YP_001943106.1 1161227 D 290315 CDS YP_001943107.1 189346578 6353761 1162013..1162804 1 NC_010803.1 KEGG: cph:Cpha266_0487 hypothetical protein; hypothetical protein 1162804 6353761 Clim_1059 Chlorobium limicola DSM 245 hypothetical protein YP_001943107.1 1162013 D 290315 CDS YP_001943108.1 189346579 6353762 1162820..1163584 1 NC_010803.1 catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM 1163584 6353762 Clim_1060 Chlorobium limicola DSM 245 cobalt transport protein CbiM YP_001943108.1 1162820 D 290315 CDS YP_001943109.1 189346580 6353763 1163584..1163895 1 NC_010803.1 periplasmic cobalt binding component of the cobalt transport system; cobalt transport protein CbiN 1163895 6353763 Clim_1061 Chlorobium limicola DSM 245 cobalt transport protein CbiN YP_001943109.1 1163584 D 290315 CDS YP_001943110.1 189346581 6353764 1163892..1164686 1 NC_010803.1 TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: cte:CT0392 cobalt transport protein; cobalt ABC transporter inner membrane subunit CbiQ 1164686 6353764 Clim_1062 Chlorobium limicola DSM 245 cobalt ABC transporter inner membrane subunit CbiQ YP_001943110.1 1163892 D 290315 CDS YP_001943111.1 189346582 6353765 1164680..1165534 1 NC_010803.1 KEGG: cte:CT0391 cobalt transport protein; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter; SMART: AAA ATPase; cobalt ABC transporter ATPase 1165534 6353765 Clim_1063 Chlorobium limicola DSM 245 cobalt ABC transporter ATPase YP_001943111.1 1164680 D 290315 CDS YP_001943112.1 189346583 6353766 1166075..1168060 1 NC_010803.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cph:Cpha266_1115 TonB-dependent receptor; TonB-dependent receptor 1168060 6353766 Clim_1064 Chlorobium limicola DSM 245 TonB-dependent receptor YP_001943112.1 1166075 D 290315 CDS YP_001943113.1 189346584 6353767 1168200..1168844 1 NC_010803.1 KEGG: cch:Cag_1013 nitroreductase family protein; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; cob(II)yrinic acid a,c-diamide reductase 1168844 6353767 Clim_1065 Chlorobium limicola DSM 245 cob(II)yrinic acid a,c-diamide reductase YP_001943113.1 1168200 D 290315 CDS YP_001943114.1 189346585 6353768 1168838..1170349 1 NC_010803.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 1170349 6353768 Clim_1066 Chlorobium limicola DSM 245 cobyric acid synthase YP_001943114.1 1168838 D 290315 CDS YP_001943115.1 189346586 6354717 1170346..1171425 1 NC_010803.1 TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: cph:Cpha266_1118 L-threonine O-3-phosphate decarboxylase; L-threonine-O-3-phosphate decarboxylase 1171425 6354717 Clim_1067 Chlorobium limicola DSM 245 L-threonine-O-3-phosphate decarboxylase YP_001943115.1 1170346 D 290315 CDS YP_001943116.1 189346587 6354718 1171425..1172390 1 NC_010803.1 CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 1172390 cobD 6354718 cobD Chlorobium limicola DSM 245 cobalamin biosynthesis protein YP_001943116.1 1171425 D 290315 CDS YP_001943117.1 189346588 6354258 1172439..1172975 1 NC_010803.1 TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; KEGG: cph:Cpha266_1120 cob(I)yrinic acid a,c-diamide adenosyltransferase; cob(I)alamin adenosyltransferase 1172975 6354258 Clim_1069 Chlorobium limicola DSM 245 cob(I)alamin adenosyltransferase YP_001943117.1 1172439 D 290315 CDS YP_001943118.1 189346589 6355712 1172983..1174011 1 NC_010803.1 PFAM: transport system permease protein; KEGG: pvi:Cvib_0818 transport system permease protein; transport system permease 1174011 6355712 Clim_1070 Chlorobium limicola DSM 245 transport system permease YP_001943118.1 1172983 D 290315 CDS YP_001943119.1 189346590 6355713 1174303..1175586 1 NC_010803.1 PFAM: SMC domain protein; ABC transporter; SMART: AAA ATPase; KEGG: cph:Cpha266_1122 ABC transporter; ABC transporter 1175586 6355713 Clim_1071 Chlorobium limicola DSM 245 ABC transporter YP_001943119.1 1174303 D 290315 CDS YP_001943120.1 189346591 6355714 1175597..1176391 1 NC_010803.1 PFAM: xylose isomerase; KEGG: cch:Cag_1076 hypothetical protein; xylose isomerase 1176391 6355714 Clim_1072 Chlorobium limicola DSM 245 xylose isomerase YP_001943120.1 1175597 D 290315 CDS YP_001943121.1 189346592 6355715 complement(1176352..1179084) 1 NC_010803.1 PFAM: Cna B domain protein; KEGG: plt:Plut_1105 hypothetical protein; Cna B domain-containing protein 1179084 6355715 Clim_1073 Chlorobium limicola DSM 245 Cna B domain-containing protein YP_001943121.1 1176352 R 290315 CDS YP_001943122.1 189346593 6355716 complement(1179115..1179924) 1 NC_010803.1 KEGG: plt:Plut_1104 hypothetical protein; hypothetical protein 1179924 6355716 Clim_1074 Chlorobium limicola DSM 245 hypothetical protein YP_001943122.1 1179115 R 290315 CDS YP_001943123.1 189346594 6355717 complement(1179924..1180544) 1 NC_010803.1 KEGG: plt:Plut_1095 hypothetical protein; hypothetical protein 1180544 6355717 Clim_1075 Chlorobium limicola DSM 245 hypothetical protein YP_001943123.1 1179924 R 290315 CDS YP_001943124.1 189346595 6355718 complement(1180544..1181182) 1 NC_010803.1 KEGG: plt:Plut_1100 hypothetical protein; hypothetical protein 1181182 6355718 Clim_1076 Chlorobium limicola DSM 245 hypothetical protein YP_001943124.1 1180544 R 290315 CDS YP_001943125.1 189346596 6355719 complement(1181564..1182100) 1 NC_010803.1 hypothetical protein 1182100 6355719 Clim_1077 Chlorobium limicola DSM 245 hypothetical protein YP_001943125.1 1181564 R 290315 CDS YP_001943126.1 189346597 6355720 1182193..1182708 1 NC_010803.1 PFAM: cobalbumin biosynthesis protein; KEGG: cte:CT0945 cobalamin biosynthesis protein CobP; adenosylcobinamide-phosphate guanylyltransferase 1182708 6355720 Clim_1078 Chlorobium limicola DSM 245 adenosylcobinamide-phosphate guanylyltransferase YP_001943126.1 1182193 D 290315 CDS YP_001943127.1 189346598 6355721 1182900..1183970 1 NC_010803.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1183970 cobT 6355721 cobT Chlorobium limicola DSM 245 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_001943127.1 1182900 D 290315 CDS YP_001943128.1 189346599 6355722 1183986..1184876 1 NC_010803.1 PFAM: alpha/beta hydrolase fold; Ndr family protein; KEGG: cph:Cpha266_2528 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1184876 6355722 Clim_1080 Chlorobium limicola DSM 245 alpha/beta hydrolase fold protein YP_001943128.1 1183986 D 290315 CDS YP_001943129.1 189346600 6355723 1184879..1185628 1 NC_010803.1 TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: cte:CT0948 cobalamin 5'-phosphate synthase; cobalamin 5'-phosphate synthase 1185628 6355723 Clim_1081 Chlorobium limicola DSM 245 cobalamin 5'-phosphate synthase YP_001943129.1 1184879 D 290315 CDS YP_001943130.1 189346601 6355724 complement(1185645..1186577) 1 NC_010803.1 KEGG: cph:Cpha266_1560 hypothetical protein; hypothetical protein 1186577 6355724 Clim_1082 Chlorobium limicola DSM 245 hypothetical protein YP_001943130.1 1185645 R 290315 CDS YP_001943131.1 189346602 6355725 complement(1186729..1189392) 1 NC_010803.1 KEGG: gfo:GFO_0848 two-component system sensor histidine kinase/response regulator hybrid; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; multi-sensor hybrid histidine kinase 1189392 6355725 Clim_1083 Chlorobium limicola DSM 245 multi-sensor hybrid histidine kinase YP_001943131.1 1186729 R 290315 CDS YP_001943132.1 189346603 6355726 complement(1189528..1192194) 1 NC_010803.1 KEGG: cph:Cpha266_1553 hypothetical protein; hypothetical protein 1192194 6355726 Clim_1084 Chlorobium limicola DSM 245 hypothetical protein YP_001943132.1 1189528 R 290315 CDS YP_001943133.1 189346604 6355727 complement(1192220..1192573) 1 NC_010803.1 PFAM: conserved hypothetical protein; KEGG: cph:Cpha266_1552 uncharacterised conserved protein UCP025560; hypothetical protein 1192573 6355727 Clim_1085 Chlorobium limicola DSM 245 hypothetical protein YP_001943133.1 1192220 R 290315 CDS YP_001943134.1 189346605 6355728 complement(1192590..1192796) 1 NC_010803.1 KEGG: cph:Cpha266_1551 hypothetical protein; hypothetical protein 1192796 6355728 Clim_1086 Chlorobium limicola DSM 245 hypothetical protein YP_001943134.1 1192590 R 290315 CDS YP_001943135.1 189346606 6355729 complement(1192829..1193302) 1 NC_010803.1 KEGG: pvi:Cvib_0834 hypothetical protein; hypothetical protein 1193302 6355729 Clim_1087 Chlorobium limicola DSM 245 hypothetical protein YP_001943135.1 1192829 R 290315 CDS YP_001943136.1 189346607 6355730 1193488..1193817 1 NC_010803.1 PFAM: small multidrug resistance protein; KEGG: gsu:GSU0708 multidrug resistance protein; small multidrug resistance protein 1193817 6355730 Clim_1088 Chlorobium limicola DSM 245 small multidrug resistance protein YP_001943136.1 1193488 D 290315 CDS YP_001943137.1 189346608 6355731 complement(1193786..1194280) 1 NC_010803.1 KEGG: fal:FRAAL1779 integral membrane acyltransferase; hypothetical protein 1194280 6355731 Clim_1089 Chlorobium limicola DSM 245 hypothetical protein YP_001943137.1 1193786 R 290315 CDS YP_001943138.1 189346609 6355732 complement(1194328..1194747) 1 NC_010803.1 KEGG: pde:Pden_2389 hypothetical protein; hypothetical protein 1194747 6355732 Clim_1090 Chlorobium limicola DSM 245 hypothetical protein YP_001943138.1 1194328 R 290315 CDS YP_001943139.1 189346610 6355733 complement(1194744..1195388) 1 NC_010803.1 KEGG: cph:Cpha266_1345 hypothetical protein; hypothetical protein 1195388 6355733 Clim_1091 Chlorobium limicola DSM 245 hypothetical protein YP_001943139.1 1194744 R 290315 CDS YP_001943140.1 189346611 6355734 1195512..1196480 1 NC_010803.1 KEGG: cph:Cpha266_0294 hypothetical protein; hypothetical protein 1196480 6355734 Clim_1092 Chlorobium limicola DSM 245 hypothetical protein YP_001943140.1 1195512 D 290315 CDS YP_001943141.1 189346612 6355735 1196706..1197512 1 NC_010803.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: cte:CT1215 thioredoxin; thioredoxin 1197512 6355735 Clim_1093 Chlorobium limicola DSM 245 thioredoxin YP_001943141.1 1196706 D 290315 CDS YP_001943142.1 189346613 6355736 1197598..1198191 1 NC_010803.1 KEGG: cph:Cpha266_0980 5 nucleotidase, deoxy, cytosolic type C; 5' nucleotidase 1198191 6355736 Clim_1094 Chlorobium limicola DSM 245 5' nucleotidase YP_001943142.1 1197598 D 290315 CDS YP_001943143.1 189346614 6355737 complement(1198273..1198788) 1 NC_010803.1 KEGG: pvi:Cvib_1062 hypothetical protein; hypothetical protein 1198788 6355737 Clim_1095 Chlorobium limicola DSM 245 hypothetical protein YP_001943143.1 1198273 R 290315 CDS YP_001943144.1 189346615 6355738 complement(1198898..1200079) 1 NC_010803.1 PFAM: Protein of unknown function methylase SMART: PUA domain containing protein; KEGG: plt:Plut_1226 hypothetical protein; hypothetical protein 1200079 6355738 Clim_1096 Chlorobium limicola DSM 245 hypothetical protein YP_001943144.1 1198898 R 290315 CDS YP_001943145.1 189346616 6355739 1200301..1201161 1 NC_010803.1 KEGG: cph:Cpha266_0982 hypothetical protein; hypothetical protein 1201161 6355739 Clim_1097 Chlorobium limicola DSM 245 hypothetical protein YP_001943145.1 1200301 D 290315 CDS YP_001943146.1 189346617 6355740 complement(1201279..1201881) 1 NC_010803.1 PFAM: manganese and iron superoxide dismutase; KEGG: cte:CT1211 superoxide dismutase; superoxide dismutase 1201881 6355740 Clim_1098 Chlorobium limicola DSM 245 superoxide dismutase YP_001943146.1 1201279 R 290315 CDS YP_001943147.1 189346618 6355741 1202015..1202377 1 NC_010803.1 KEGG: plt:Plut_1223 hypothetical protein; hypothetical protein 1202377 6355741 Clim_1099 Chlorobium limicola DSM 245 hypothetical protein YP_001943147.1 1202015 D 290315 CDS YP_001943148.1 189346619 6355742 1202374..1203027 1 NC_010803.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 1203027 coaE 6355742 coaE Chlorobium limicola DSM 245 dephospho-CoA kinase YP_001943148.1 1202374 D 290315 CDS YP_001943149.1 189346620 6355743 complement(1203007..1204032) 1 NC_010803.1 PFAM: esterase; KEGG: cph:Cpha266_0986 esterase; esterase 1204032 6355743 Clim_1101 Chlorobium limicola DSM 245 esterase YP_001943149.1 1203007 R 290315 CDS YP_001943150.1 189346621 6355744 complement(1204029..1205048) 1 NC_010803.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: cph:Cpha266_0987 sec-independent protein translocase TatC; Sec-independent protein translocase subunit TatC 1205048 6355744 Clim_1102 Chlorobium limicola DSM 245 Sec-independent protein translocase subunit TatC YP_001943150.1 1204029 R 290315 CDS YP_001943151.1 189346622 6355745 1205250..1206224 1 NC_010803.1 PFAM: Polyprenyl synthetase; KEGG: cph:Cpha266_0988 trans-hexaprenyltranstransferase; polyprenyl synthetase 1206224 6355745 Clim_1103 Chlorobium limicola DSM 245 polyprenyl synthetase YP_001943151.1 1205250 D 290315 CDS YP_001943152.1 189346623 6355746 1206281..1207015 1 NC_010803.1 PFAM: PASTA domain containing protein; KEGG: cph:Cpha266_0989 PASTA domain containing protein; protein PASTA domain-containing protein 1207015 6355746 Clim_1104 Chlorobium limicola DSM 245 protein PASTA domain-containing protein YP_001943152.1 1206281 D 290315 CDS YP_001943153.1 189346624 6355747 complement(1207033..1207203) 1 NC_010803.1 KEGG: cch:Cag_1501 hypothetical protein; hypothetical protein 1207203 6355747 Clim_1105 Chlorobium limicola DSM 245 hypothetical protein YP_001943153.1 1207033 R 290315 CDS YP_001943154.1 189346625 6355748 complement(1207274..1207573) 1 NC_010803.1 KEGG: plt:Plut_0918 hypothetical protein; hypothetical protein 1207573 6355748 Clim_1106 Chlorobium limicola DSM 245 hypothetical protein YP_001943154.1 1207274 R 290315 CDS YP_001943155.1 189346626 6355749 1207723..1209135 1 NC_010803.1 PFAM: Chloride channel core; KEGG: cte:CT1391 chloride channel; chloride channel core protein 1209135 6355749 Clim_1107 Chlorobium limicola DSM 245 chloride channel core protein YP_001943155.1 1207723 D 290315 CDS YP_001943156.1 189346627 6355750 complement(1208949..1210307) 1 NC_010803.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: cph:Cpha266_0993 ABC transporter; ABC transporter 1210307 6355750 Clim_1108 Chlorobium limicola DSM 245 ABC transporter YP_001943156.1 1208949 R 290315 CDS YP_001943157.1 189346628 6355751 complement(1210314..1211270) 1 NC_010803.1 PFAM: Alcohol dehydrogenase GroES domain protein; Ketopantoate reductase ApbA/PanE domain protein; KEGG: cph:Cpha266_0994 alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase GroES domain-containing protein 1211270 6355751 Clim_1109 Chlorobium limicola DSM 245 Alcohol dehydrogenase GroES domain-containing protein YP_001943157.1 1210314 R 290315 CDS YP_001943158.1 189346629 6355752 complement(1211305..1211646) 1 NC_010803.1 PFAM: membrane protein of unknown function; KEGG: cph:Cpha266_0995 membrane protein of unknown function; hypothetical protein 1211646 6355752 Clim_1110 Chlorobium limicola DSM 245 hypothetical protein YP_001943158.1 1211305 R 290315 CDS YP_001943159.1 189346630 6355753 complement(1211723..1213096) 1 NC_010803.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 1213096 6355753 Clim_1111 Chlorobium limicola DSM 245 DNA repair protein RadA YP_001943159.1 1211723 R 290315 CDS YP_001943160.1 189346631 6355754 complement(1213105..1213995) 1 NC_010803.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 1213995 6355754 Clim_1112 Chlorobium limicola DSM 245 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_001943160.1 1213105 R 290315 CDS YP_001943161.1 189346632 6355755 1214186..1215148 1 NC_010803.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: plt:Plut_1144 alcohol dehydrogenase, zinc-containing; Alcohol dehydrogenase GroES domain-containing protein 1215148 6355755 Clim_1113 Chlorobium limicola DSM 245 Alcohol dehydrogenase GroES domain-containing protein YP_001943161.1 1214186 D 290315 CDS YP_001943162.1 189346633 6355756 1215159..1216241 1 NC_010803.1 KEGG: pvi:Cvib_0811 anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; anthranilate phosphoribosyltransferase 1216241 6355756 Clim_1114 Chlorobium limicola DSM 245 anthranilate phosphoribosyltransferase YP_001943162.1 1215159 D 290315 CDS YP_001943163.1 189346634 6355757 1216364..1216936 1 NC_010803.1 KEGG: cch:Cag_0780 hypothetical protein; hypothetical protein 1216936 6355757 Clim_1115 Chlorobium limicola DSM 245 hypothetical protein YP_001943163.1 1216364 D 290315 CDS YP_001943164.1 189346635 6355758 1216936..1218390 1 NC_010803.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: cph:Cpha266_1547 RNA polymerase, sigma 54 subunit, RpoN; RNA polymerase sigma-54 subunit RpoN 1218390 6355758 Clim_1116 Chlorobium limicola DSM 245 RNA polymerase sigma-54 subunit RpoN YP_001943164.1 1216936 D 290315 CDS YP_001943165.1 189346636 6355759 1218406..1218954 1 NC_010803.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 1218954 6355759 Clim_1117 Chlorobium limicola DSM 245 ATP-dependent protease peptidase subunit YP_001943165.1 1218406 D 290315 CDS YP_001943166.1 189346637 6355760 1219015..1220487 1 NC_010803.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 1220487 hslU 6355760 hslU Chlorobium limicola DSM 245 ATP-dependent protease ATP-binding subunit HslU YP_001943166.1 1219015 D 290315 CDS YP_001943167.1 189346638 6355761 1220499..1220960 1 NC_010803.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 1220960 6355761 Clim_1119 Chlorobium limicola DSM 245 3-dehydroquinate dehydratase YP_001943167.1 1220499 D 290315 CDS YP_001943168.1 189346639 6355762 complement(1221106..1221612) 1 NC_010803.1 hypothetical protein 1221612 6355762 Clim_1120 Chlorobium limicola DSM 245 hypothetical protein YP_001943168.1 1221106 R 290315 CDS YP_001943169.1 189346640 6355763 1221672..1224431 1 NC_010803.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bvu:BVU_1231 TonB-dependent outer membrane receptor protein; TonB-dependent receptor plug 1224431 6355763 Clim_1121 Chlorobium limicola DSM 245 TonB-dependent receptor plug YP_001943169.1 1221672 D 290315 CDS YP_001943170.1 189346641 6355764 1224512..1225570 1 NC_010803.1 KEGG: fjo:Fjoh_1367 phytase; phytase 1225570 6355764 Clim_1122 Chlorobium limicola DSM 245 phytase YP_001943170.1 1224512 D 290315 CDS YP_001943171.1 189346642 6355765 1225862..1227571 1 NC_010803.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: plt:Plut_1072 2-oxoacid:ferredoxin oxidoreductase, alpha subunit; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 1227571 6355765 Clim_1123 Chlorobium limicola DSM 245 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_001943171.1 1225862 D 290315 CDS YP_001943172.1 189346643 6355766 1227564..1228427 1 NC_010803.1 TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: plt:Plut_1073 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate; pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta 1228427 6355766 Clim_1124 Chlorobium limicola DSM 245 pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta YP_001943172.1 1227564 D 290315 CDS YP_001943173.1 189346644 6355767 1228477..1228818 1 NC_010803.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 1228818 phhB 6355767 phhB Chlorobium limicola DSM 245 pterin-4-alpha-carbinolamine dehydratase YP_001943173.1 1228477 D 290315 CDS YP_001943174.1 189346645 6355768 1229513..1229728 1 NC_010803.1 hypothetical protein 1229728 6355768 Clim_1126 Chlorobium limicola DSM 245 hypothetical protein YP_001943174.1 1229513 D 290315 CDS YP_001943175.1 189346646 6355769 complement(1229695..1229916) 1 NC_010803.1 KEGG: cte:CT1775 hypothetical protein; hypothetical protein 1229916 6355769 Clim_1127 Chlorobium limicola DSM 245 hypothetical protein YP_001943175.1 1229695 R 290315 CDS YP_001943176.1 189346647 6354834 complement(1229959..1230432) 1 NC_010803.1 PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: cte:CT1776 bacteriochlorophyll c3(1) hydratase; 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD 1230432 6354834 Clim_1128 Chlorobium limicola DSM 245 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD YP_001943176.1 1229959 R 290315 CDS YP_001943177.1 189346648 6353645 complement(1230445..1230669) 1 NC_010803.1 hypothetical protein 1230669 6353645 Clim_1129 Chlorobium limicola DSM 245 hypothetical protein YP_001943177.1 1230445 R 290315 CDS YP_001943178.1 189346649 6353646 complement(1230719..1231213) 1 NC_010803.1 KEGG: cte:CT1002 hypothetical protein; transcriptional regulator 1231213 6353646 Clim_1130 Chlorobium limicola DSM 245 transcriptional regulator YP_001943178.1 1230719 R 290315 CDS YP_001943179.1 189346650 6353647 1231337..1231909 1 NC_010803.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: cph:Cpha266_1068 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1231909 6353647 Clim_1131 Chlorobium limicola DSM 245 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001943179.1 1231337 D 290315 CDS YP_001943180.1 189346651 6353648 1232233..1232790 1 NC_010803.1 TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: cte:CT0595 hypothetical protein; 2'-5' RNA ligase 1232790 6353648 Clim_1132 Chlorobium limicola DSM 245 2'-5' RNA ligase YP_001943180.1 1232233 D 290315 CDS YP_001943181.1 189346652 6353649 1232818..1233264 1 NC_010803.1 KEGG: cte:CT1238 hypothetical protein; hypothetical protein 1233264 6353649 Clim_1133 Chlorobium limicola DSM 245 hypothetical protein YP_001943181.1 1232818 D 290315 CDS YP_001943182.1 189346653 6353650 1233725..1234894 1 NC_010803.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: cph:Cpha266_1066 geranylgeranyl reductase; geranylgeranyl reductase 1234894 6353650 Clim_1134 Chlorobium limicola DSM 245 geranylgeranyl reductase YP_001943182.1 1233725 D 290315 CDS YP_001943183.1 189346654 6353651 1235207..1235614 1 NC_010803.1 hypothetical protein 1235614 6353651 Clim_1135 Chlorobium limicola DSM 245 hypothetical protein YP_001943183.1 1235207 D 290315 CDS YP_001943184.1 189346655 6353652 complement(1235817..1236173) 1 NC_010803.1 KEGG: bbr:BB1527 hypothetical protein; hypothetical protein 1236173 6353652 Clim_1136 Chlorobium limicola DSM 245 hypothetical protein YP_001943184.1 1235817 R 290315 CDS YP_001943185.1 189346656 6353653 complement(1236480..1237250) 1 NC_010803.1 KEGG: cph:Cpha266_1424 nitroreductase; nitroreductase 1237250 6353653 Clim_1137 Chlorobium limicola DSM 245 nitroreductase YP_001943185.1 1236480 R 290315 CDS YP_001943186.1 189346657 6353654 complement(1237251..1237673) 1 NC_010803.1 PFAM: NUDIX hydrolase; KEGG: plt:Plut_1259 hypothetical protein; NUDIX hydrolase 1237673 6353654 Clim_1138 Chlorobium limicola DSM 245 NUDIX hydrolase YP_001943186.1 1237251 R 290315 CDS YP_001943187.1 189346658 6353655 1237971..1238504 1 NC_010803.1 KEGG: cph:Cpha266_1686 hypothetical protein; hypothetical protein 1238504 6353655 Clim_1139 Chlorobium limicola DSM 245 hypothetical protein YP_001943187.1 1237971 D 290315 CDS YP_001943188.1 189346659 6353656 complement(1238585..1238809) 1 NC_010803.1 KEGG: cph:Cpha266_1681 hypothetical protein; hypothetical protein 1238809 6353656 Clim_1140 Chlorobium limicola DSM 245 hypothetical protein YP_001943188.1 1238585 R 290315 CDS YP_001943189.1 189346660 6353657 complement(1238997..1239413) 1 NC_010803.1 KEGG: cph:Cpha266_1976 hypothetical protein; hypothetical protein 1239413 6353657 Clim_1141 Chlorobium limicola DSM 245 hypothetical protein YP_001943189.1 1238997 R 290315 CDS YP_001943190.1 189346661 6353658 1239600..1241102 1 NC_010803.1 KEGG: cph:Cpha266_1680 Pep581 peptidase. Metallo peptidase. MEROPS family M20C; TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; aminoacyl-histidine dipeptidase 1241102 6353658 Clim_1142 Chlorobium limicola DSM 245 aminoacyl-histidine dipeptidase YP_001943190.1 1239600 D 290315 CDS YP_001943191.1 189346662 6353659 complement(1241074..1241373) 1 NC_010803.1 KEGG: plt:Plut_0470 hypothetical protein; hypothetical protein 1241373 6353659 Clim_1143 Chlorobium limicola DSM 245 hypothetical protein YP_001943191.1 1241074 R 290315 CDS YP_001943192.1 189346663 6353660 complement(1241373..1241840) 1 NC_010803.1 catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 1241840 mgsA 6353660 mgsA Chlorobium limicola DSM 245 methylglyoxal synthase YP_001943192.1 1241373 R 290315 CDS YP_001943193.1 189346664 6353661 1241978..1243399 1 NC_010803.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cph:Cpha266_1773 hypothetical protein; endonuclease/exonuclease/phosphatase 1243399 6353661 Clim_1145 Chlorobium limicola DSM 245 endonuclease/exonuclease/phosphatase YP_001943193.1 1241978 D 290315 CDS YP_001943194.1 189346665 6353662 1243567..1244142 1 NC_010803.1 PFAM: protein of unknown function DUF134; KEGG: plt:Plut_0906 hypothetical protein; hypothetical protein 1244142 6353662 Clim_1146 Chlorobium limicola DSM 245 hypothetical protein YP_001943194.1 1243567 D 290315 CDS YP_001943195.1 189346666 6353663 1244161..1244529 1 NC_010803.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: cph:Cpha266_1457 dinitrogenase iron-molybdenum cofactor biosynthesis; dinitrogenase iron-molybdenum cofactor biosynthesis protein 1244529 6353663 Clim_1147 Chlorobium limicola DSM 245 dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_001943195.1 1244161 D 290315 CDS YP_001943196.1 189346667 6353664 complement(1244650..1245651) 1 NC_010803.1 TIGRFAM: methyltransferase; KEGG: bpd:BURPS668_A1051 IMP dehydrogenase/GMP reductase; methyltransferase 1245651 6353664 Clim_1148 Chlorobium limicola DSM 245 methyltransferase YP_001943196.1 1244650 R 290315 CDS YP_001943197.1 189346668 6353665 complement(1245844..1247217) 1 NC_010803.1 PFAM: Rhodanese domain protein; KEGG: sru:SRU_0931 thiosulfate sulfurtransferase; rhodanese domain-containing protein 1247217 6353665 Clim_1149 Chlorobium limicola DSM 245 rhodanese domain-containing protein YP_001943197.1 1245844 R 290315 CDS YP_001943198.1 189346669 6353666 1247316..1248524 1 NC_010803.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: cph:Cpha266_1977 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 1248524 6353666 Clim_1150 Chlorobium limicola DSM 245 NADH:flavin oxidoreductase YP_001943198.1 1247316 D 290315 CDS YP_001943199.1 189346670 6353667 complement(1248571..1249260) 1 NC_010803.1 TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: cph:Cpha266_1922 MIP family channel proteins; MIP family channel protein 1249260 6353667 Clim_1151 Chlorobium limicola DSM 245 MIP family channel protein YP_001943199.1 1248571 R 290315 CDS YP_001943200.1 189346671 6353668 complement(1249480..1250280) 1 NC_010803.1 PFAM: zinc/iron permease; KEGG: cph:Cpha266_1456 zinc transporter ZupT; zinc transporter ZupT 1250280 6353668 Clim_1152 Chlorobium limicola DSM 245 zinc transporter ZupT YP_001943200.1 1249480 R 290315 CDS YP_001943201.1 189346672 6353669 complement(1250430..1250984) 1 NC_010803.1 PFAM: conserved hypothetical protein; KEGG: cph:Cpha266_1454 conserved hypothetical protein 730; hypothetical protein 1250984 6353669 Clim_1153 Chlorobium limicola DSM 245 hypothetical protein YP_001943201.1 1250430 R 290315 CDS YP_001943202.1 189346673 6353670 complement(1250981..1251634) 1 NC_010803.1 PFAM: glycosyl transferase family 2; KEGG: cte:CT1271 glycosyl transferase; family 2 glycosyl transferase 1251634 6353670 Clim_1154 Chlorobium limicola DSM 245 family 2 glycosyl transferase YP_001943202.1 1250981 R 290315 CDS YP_001943203.1 189346674 6353671 complement(1251631..1252761) 1 NC_010803.1 TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: cph:Cpha266_1449 bacteriochlorophyll/chlorophyll a synthase; bacteriochlorophyll/chlorophyll a synthase 1252761 6353671 Clim_1155 Chlorobium limicola DSM 245 bacteriochlorophyll/chlorophyll a synthase YP_001943203.1 1251631 R 290315 CDS YP_001943204.1 189346675 6353672 1252848..1253000 1 NC_010803.1 hypothetical protein 1253000 6353672 Clim_1156 Chlorobium limicola DSM 245 hypothetical protein YP_001943204.1 1252848 D 290315 CDS YP_001943205.1 189346676 6353673 1253124..1253597 1 NC_010803.1 KEGG: pvi:Cvib_0746 hypothetical protein; hypothetical protein 1253597 6353673 Clim_1157 Chlorobium limicola DSM 245 hypothetical protein YP_001943205.1 1253124 D 290315 CDS YP_001943206.1 189346677 6353674 1253610..1254101 1 NC_010803.1 PFAM: GCN5-related N-acetyltransferase; KEGG: plt:Plut_0913 acetyltransferase, GNAT family; N-acetyltransferase GCN5 1254101 6353674 Clim_1158 Chlorobium limicola DSM 245 N-acetyltransferase GCN5 YP_001943206.1 1253610 D 290315 CDS YP_001943207.1 189346678 6353675 1254242..1254529 1 NC_010803.1 hypothetical protein 1254529 6353675 Clim_1159 Chlorobium limicola DSM 245 hypothetical protein YP_001943207.1 1254242 D 290315 CDS YP_001943208.1 189346679 6353676 1254564..1255187 1 NC_010803.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: cph:Cpha266_1421 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 1255187 6353676 Clim_1160 Chlorobium limicola DSM 245 lysine exporter protein LysE/YggA YP_001943208.1 1254564 D 290315 CDS YP_001943209.1 189346680 6353677 1255256..1256380 1 NC_010803.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bba:Bd2628 hypothetical protein; Rieske (2Fe-2S) domain-containing protein 1256380 6353677 Clim_1161 Chlorobium limicola DSM 245 Rieske (2Fe-2S) domain-containing protein YP_001943209.1 1255256 D 290315 CDS YP_001943210.1 189346681 6353679 complement(1257896..1258084) 1 NC_010803.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: plt:Plut_1216 ferredoxin, 4Fe-4S; 4Fe-4S ferredoxin 1258084 6353679 Clim_1163 Chlorobium limicola DSM 245 4Fe-4S ferredoxin YP_001943210.1 1257896 R 290315 CDS YP_001943211.1 189346682 6353680 complement(1258199..1259644) 1 NC_010803.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pvi:Cvib_0369 radical SAM domain protein; radical SAM protein 1259644 6353680 Clim_1164 Chlorobium limicola DSM 245 radical SAM protein YP_001943211.1 1258199 R 290315 CDS YP_001943212.1 189346683 6353681 complement(1259905..1260093) 1 NC_010803.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pvi:Cvib_0750 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1260093 6353681 Clim_1165 Chlorobium limicola DSM 245 4Fe-4S ferredoxin YP_001943212.1 1259905 R 290315 CDS YP_001943213.1 189346684 6353682 complement(1260204..1261163) 1 NC_010803.1 PFAM: PhoH family protein; KEGG: cph:Cpha266_1415 PhoH family protein; PhoH family protein 1261163 6353682 Clim_1166 Chlorobium limicola DSM 245 PhoH family protein YP_001943213.1 1260204 R 290315 CDS YP_001943214.1 189346685 6353683 complement(1261160..1262176) 1 NC_010803.1 TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: cch:Cag_1084 ADP-L-glycero-D-manno-heptose-6-epimerase; ADP-L-glycero-D-manno-heptose-6-epimerase 1262176 6353683 Clim_1167 Chlorobium limicola DSM 245 ADP-L-glycero-D-manno-heptose-6-epimerase YP_001943214.1 1261160 R 290315 CDS YP_001943215.1 189346686 6353684 complement(1262287..1262709) 1 NC_010803.1 KEGG: cph:Cpha266_1413 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 1262709 6353684 Clim_1168 Chlorobium limicola DSM 245 ECF subfamily RNA polymerase sigma-24 subunit YP_001943215.1 1262287 R 290315 CDS YP_001943216.1 189346687 6353685 1262890..1263957 1 NC_010803.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: cph:Cpha266_1412 histidinol phosphate aminotransferase; histidinol-phosphate aminotransferase 1263957 6353685 Clim_1169 Chlorobium limicola DSM 245 histidinol-phosphate aminotransferase YP_001943216.1 1262890 D 290315 CDS YP_001943217.1 189346688 6353686 1263959..1264498 1 NC_010803.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: cph:Cpha266_1411 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 1264498 6353686 Clim_1170 Chlorobium limicola DSM 245 tRNA/rRNA methyltransferase SpoU YP_001943217.1 1263959 D 290315 CDS YP_001943218.1 189346689 6353687 1264562..1265398 1 NC_010803.1 PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_1410 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1265398 6353687 Clim_1171 Chlorobium limicola DSM 245 alpha/beta hydrolase fold protein YP_001943218.1 1264562 D 290315 CDS YP_001943219.1 189346690 6353688 complement(1265395..1265967) 1 NC_010803.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 1265967 6353688 Clim_1172 Chlorobium limicola DSM 245 peptidyl-tRNA hydrolase YP_001943219.1 1265395 R 290315 CDS YP_001943220.1 189346691 6353689 complement(1266066..1268150) 1 NC_010803.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 1268150 hppA 6353689 hppA Chlorobium limicola DSM 245 membrane-bound proton-translocating pyrophosphatase YP_001943220.1 1266066 R 290315 CDS YP_001943221.1 189346692 6353690 1268585..1271005 1 NC_010803.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 1271005 hppA 6353690 hppA Chlorobium limicola DSM 245 membrane-bound proton-translocating pyrophosphatase YP_001943221.1 1268585 D 290315 CDS YP_001943222.1 189346693 6353691 1271107..1271430 1 NC_010803.1 KEGG: cph:Cpha266_1023 mitomycin resistance protein; mitomycin resistance protein 1271430 6353691 Clim_1175 Chlorobium limicola DSM 245 mitomycin resistance protein YP_001943222.1 1271107 D 290315 CDS YP_001943223.1 189346694 6353692 1271427..1272365 1 NC_010803.1 PFAM: Domain of unknown function DUF1848; KEGG: cph:Cpha266_1022 hypothetical protein; hypothetical protein 1272365 6353692 Clim_1176 Chlorobium limicola DSM 245 hypothetical protein YP_001943223.1 1271427 D 290315 CDS YP_001943224.1 189346695 6353693 1272619..1272831 1 NC_010803.1 KEGG: ppg:PputGB1_4162 hypothetical protein; hypothetical protein 1272831 6353693 Clim_1177 Chlorobium limicola DSM 245 hypothetical protein YP_001943224.1 1272619 D 290315 CDS YP_001943225.1 189346696 6353694 complement(1272862..1273137) 1 NC_010803.1 PFAM: protein of unknown function DUF156; KEGG: pap:PSPA7_4093 hypothetical protein; hypothetical protein 1273137 6353694 Clim_1178 Chlorobium limicola DSM 245 hypothetical protein YP_001943225.1 1272862 R 290315 CDS YP_001943226.1 189346697 6353695 1273215..1274138 1 NC_010803.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: ppf:Pput_4528 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 1274138 6353695 Clim_1179 Chlorobium limicola DSM 245 cation diffusion facilitator family transporter YP_001943226.1 1273215 D 290315 CDS YP_001943227.1 189346698 6353696 complement(1274292..1275335) 1 NC_010803.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cph:Cpha266_1021 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 1275335 6353696 Clim_1180 Chlorobium limicola DSM 245 endonuclease/exonuclease/phosphatase YP_001943227.1 1274292 R 290315 CDS YP_001943228.1 189346699 6353697 1275447..1275875 1 NC_010803.1 KEGG: cph:Cpha266_1020 hypothetical protein; hypothetical protein 1275875 6353697 Clim_1181 Chlorobium limicola DSM 245 hypothetical protein YP_001943228.1 1275447 D 290315 CDS YP_001943229.1 189346700 6353698 1275911..1276621 1 NC_010803.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1276621 6353698 Clim_1182 Chlorobium limicola DSM 245 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_001943229.1 1275911 D 290315 CDS YP_001943230.1 189346701 6353699 1276654..1277298 1 NC_010803.1 PFAM: SNARE associated Golgi protein; KEGG: cph:Cpha266_1018 DedA family protein; hypothetical protein 1277298 6353699 Clim_1183 Chlorobium limicola DSM 245 hypothetical protein YP_001943230.1 1276654 D 290315 CDS YP_001943231.1 189346702 6353700 1277384..1278301 1 NC_010803.1 PFAM: transketolase; KEGG: cph:Cpha266_1017 transketolase subunit A; transketolase 1278301 6353700 Clim_1184 Chlorobium limicola DSM 245 transketolase YP_001943231.1 1277384 D 290315 CDS YP_001943232.1 189346703 6353701 1278310..1278861 1 NC_010803.1 PFAM: Protein of unknown function methylase KEGG: cph:Cpha266_1016 conserved hypothetical protein 95; hypothetical protein 1278861 6353701 Clim_1185 Chlorobium limicola DSM 245 hypothetical protein YP_001943232.1 1278310 D 290315 CDS YP_001943233.1 189346704 6353702 1278858..1279370 1 NC_010803.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 1279370 coaD 6353702 coaD Chlorobium limicola DSM 245 phosphopantetheine adenylyltransferase YP_001943233.1 1278858 D 290315 CDS YP_001943234.1 189346705 6353703 1279374..1280582 1 NC_010803.1 PFAM: aminotransferase class V; aminotransferase class I and II; KEGG: cph:Cpha266_1014 aminotransferase; class I and II aminotransferase 1280582 6353703 Clim_1187 Chlorobium limicola DSM 245 class I and II aminotransferase YP_001943234.1 1279374 D 290315 CDS YP_001943235.1 189346706 6353704 1280592..1281353 1 NC_010803.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: cte:CT0967 hypothetical protein; phospholipid/glycerol acyltransferase 1281353 6353704 Clim_1188 Chlorobium limicola DSM 245 phospholipid/glycerol acyltransferase YP_001943235.1 1280592 D 290315 CDS YP_001943236.1 189346707 6353705 1281427..1282407 1 NC_010803.1 PFAM: PSP1 domain protein; KEGG: cph:Cpha266_1012 PSP1 domain protein; PSP1 domain-containing protein 1282407 6353705 Clim_1189 Chlorobium limicola DSM 245 PSP1 domain-containing protein YP_001943236.1 1281427 D 290315 CDS YP_001943237.1 189346708 6353706 1282497..1284605 1 NC_010803.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 1284605 metG 6353706 metG Chlorobium limicola DSM 245 methionyl-tRNA synthetase YP_001943237.1 1282497 D 290315 CDS YP_001943238.1 189346709 6353709 complement(1285994..1286446) 1 NC_010803.1 KEGG: pvi:Cvib_0835 hypothetical protein; hypothetical protein 1286446 6353709 Clim_1192 Chlorobium limicola DSM 245 hypothetical protein YP_001943238.1 1285994 R 290315 CDS YP_001943239.1 189346710 6353710 complement(1286571..1287398) 1 NC_010803.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: cph:Cpha266_1254 peptidase C14, caspase catalytic subunit P20; peptidase C14 caspase catalytic subunit p20 1287398 6353710 Clim_1193 Chlorobium limicola DSM 245 peptidase C14 caspase catalytic subunit p20 YP_001943239.1 1286571 R 290315 CDS YP_001943240.1 189346711 6353711 1287648..1289276 1 NC_010803.1 KEGG: cph:Cpha266_1255 UDP-N-acetylmuramate dehydrogenase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 1289276 6353711 Clim_1194 Chlorobium limicola DSM 245 UDP-N-acetylenolpyruvoylglucosamine reductase YP_001943240.1 1287648 D 290315 CDS YP_001943241.1 189346712 6353712 1289371..1289799 1 NC_010803.1 hypothetical protein 1289799 6353712 Clim_1195 Chlorobium limicola DSM 245 hypothetical protein YP_001943241.1 1289371 D 290315 CDS YP_001943242.1 189346713 6353713 complement(1289882..1290748) 1 NC_010803.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: cch:Cag_1033 hydrogenase/sulfur reductase, gamma subunit; oxidoreductase FAD/NAD(P)-binding domain-containing protein 1290748 6353713 Clim_1196 Chlorobium limicola DSM 245 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_001943242.1 1289882 R 290315 CDS YP_001943243.1 189346714 6353714 complement(1290745..1291758) 1 NC_010803.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cph:Cpha266_1257 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1291758 6353714 Clim_1197 Chlorobium limicola DSM 245 4Fe-4S ferredoxin YP_001943243.1 1290745 R 290315 CDS YP_001943244.1 189346715 6353715 complement(1291768..1292601) 1 NC_010803.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cph:Cpha266_1258 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1292601 6353715 Clim_1198 Chlorobium limicola DSM 245 4Fe-4S ferredoxin YP_001943244.1 1291768 R 290315 CDS YP_001943245.1 189346716 6353716 complement(1292617..1293066) 1 NC_010803.1 PFAM: methyl-viologen-reducing hydrogenase delta subunit; KEGG: cph:Cpha266_1259 methyl-viologen-reducing hydrogenase, delta subunit; methyl-viologen-reducing hydrogenase subunit delta 1293066 6353716 Clim_1199 Chlorobium limicola DSM 245 methyl-viologen-reducing hydrogenase subunit delta YP_001943245.1 1292617 R 290315 CDS YP_001943246.1 189346717 6353717 complement(1293100..1295070) 1 NC_010803.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cph:Cpha266_1260 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1295070 6353717 Clim_1200 Chlorobium limicola DSM 245 4Fe-4S ferredoxin YP_001943246.1 1293100 R 290315 CDS YP_001943247.1 189346718 6353718 complement(1295359..1296885) 1 NC_010803.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: cph:Cpha266_1261 CoB--CoM heterodisulfide reductase; CoB--CoM heterodisulfide reductase 1296885 6353718 Clim_1201 Chlorobium limicola DSM 245 CoB--CoM heterodisulfide reductase YP_001943247.1 1295359 R 290315 CDS YP_001943248.1 189346719 6353719 1297093..1297545 1 NC_010803.1 forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 1297545 mscL 6353719 mscL Chlorobium limicola DSM 245 large-conductance mechanosensitive channel YP_001943248.1 1297093 D 290315 CDS YP_001943249.1 189346720 6353720 1297637..1298848 1 NC_010803.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1298848 6353720 Clim_1203 Chlorobium limicola DSM 245 aspartate aminotransferase YP_001943249.1 1297637 D 290315 CDS YP_001943250.1 189346721 6353721 complement(1298908..1300479) 1 NC_010803.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: cph:Cpha266_1264 carbohydrate kinase, YjeF related protein; carbohydrate kinase 1300479 6353721 Clim_1204 Chlorobium limicola DSM 245 carbohydrate kinase YP_001943250.1 1298908 R 290315 CDS YP_001943251.1 189346722 6353722 complement(1300587..1302899) 1 NC_010803.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 1302899 6353722 Clim_1205 Chlorobium limicola DSM 245 phosphoribosylformylglycinamidine synthase II YP_001943251.1 1300587 R 290315 CDS YP_001943252.1 189346723 6353723 complement(1302896..1305979) 1 NC_010803.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 1305979 secA 6353723 secA Chlorobium limicola DSM 245 preprotein translocase subunit SecA YP_001943252.1 1302896 R 290315 CDS YP_001943253.1 189346724 6355308 complement(1306163..1306339) 1 NC_010803.1 hypothetical protein 1306339 6355308 Clim_1207 Chlorobium limicola DSM 245 hypothetical protein YP_001943253.1 1306163 R 290315 CDS YP_001943254.1 189346725 6355309 complement(1306620..1307558) 1 NC_010803.1 PFAM: 8-oxoguanine DNA glycosylase domain protein; SMART: HhH-GPD family protein; KEGG: cte:CT0996 8-oxoguanine DNA glycosylase; 8-oxoguanine DNA glycosylase 1307558 6355309 Clim_1208 Chlorobium limicola DSM 245 8-oxoguanine DNA glycosylase YP_001943254.1 1306620 R 290315 CDS YP_001943255.1 189346726 6355310 complement(1307856..1308092) 1 NC_010803.1 hypothetical protein 1308092 6355310 Clim_1209 Chlorobium limicola DSM 245 hypothetical protein YP_001943255.1 1307856 R 290315 CDS YP_001943256.1 189346727 6355311 1308202..1308393 1 NC_010803.1 hypothetical protein 1308393 6355311 Clim_1210 Chlorobium limicola DSM 245 hypothetical protein YP_001943256.1 1308202 D 290315 CDS YP_001943257.1 189346728 6355312 complement(1308470..1309165) 1 NC_010803.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: cch:Cag_1016 hypothetical protein; NAD-dependent epimerase/dehydratase 1309165 6355312 Clim_1211 Chlorobium limicola DSM 245 NAD-dependent epimerase/dehydratase YP_001943257.1 1308470 R 290315 CDS YP_001943258.1 189346729 6355313 complement(1309171..1309731) 1 NC_010803.1 KEGG: pvi:Cvib_0856 hypothetical protein; hypothetical protein 1309731 6355313 Clim_1212 Chlorobium limicola DSM 245 hypothetical protein YP_001943258.1 1309171 R 290315 CDS YP_001943259.1 189346730 6355314 complement(1309800..1310678) 1 NC_010803.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 1310678 6355314 Clim_1213 Chlorobium limicola DSM 245 lipoyl synthase YP_001943259.1 1309800 R 290315 CDS YP_001943260.1 189346731 6355315 complement(1310900..1311160) 1 NC_010803.1 KEGG: cph:Cpha266_1568 hypothetical protein; hypothetical protein 1311160 6355315 Clim_1214 Chlorobium limicola DSM 245 hypothetical protein YP_001943260.1 1310900 R 290315 CDS YP_001943261.1 189346732 6355316 1311465..1312262 1 NC_010803.1 TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: pvi:Cvib_0632 3'(2'),5'-bisphosphate nucleotidase; 3'(2'),5'-bisphosphate nucleotidase 1312262 6355316 Clim_1215 Chlorobium limicola DSM 245 3'(2'),5'-bisphosphate nucleotidase YP_001943261.1 1311465 D 290315 CDS YP_001943262.1 189346733 6355317 1312500..1313702 1 NC_010803.1 KEGG: cph:Cpha266_1248 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; arsenite-activated ATPase ArsA 1313702 6355317 Clim_1216 Chlorobium limicola DSM 245 arsenite-activated ATPase ArsA YP_001943262.1 1312500 D 290315 CDS YP_001943263.1 189346734 6355318 1314102..1316126 1 NC_010803.1 KEGG: cph:Cpha266_1304 C-terminal processing peptidase-1. Serine peptidase. MEROPS family S41A; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 1316126 6355318 Clim_1217 Chlorobium limicola DSM 245 carboxyl-terminal protease YP_001943263.1 1314102 D 290315 CDS YP_001943264.1 189346735 6355319 1316287..1317216 1 NC_010803.1 TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: cph:Cpha266_1207 Na+/Ca+ antiporter, CaCA family; CaCA family Na+/Ca+ antiporter 1317216 6355319 Clim_1218 Chlorobium limicola DSM 245 CaCA family Na+/Ca+ antiporter YP_001943264.1 1316287 D 290315 CDS YP_001943265.1 189346736 6355320 1317563..1317832 1 NC_010803.1 TIGRFAM: AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein; KEGG: cch:Cag_1078 AbrB family transcriptional regulator; AbrB family transcriptional regulator 1317832 6355320 Clim_1219 Chlorobium limicola DSM 245 AbrB family transcriptional regulator YP_001943265.1 1317563 D 290315 CDS YP_001943266.1 189346737 6355321 1318213..1318407 1 NC_010803.1 hypothetical protein 1318407 6355321 Clim_1220 Chlorobium limicola DSM 245 hypothetical protein YP_001943266.1 1318213 D 290315 CDS YP_001943267.1 189346738 6355322 1318614..1319351 1 NC_010803.1 KEGG: sbl:Sbal_0943 hypothetical protein; hypothetical protein 1319351 6355322 Clim_1221 Chlorobium limicola DSM 245 hypothetical protein YP_001943267.1 1318614 D 290315 CDS YP_001943268.1 189346739 6355323 1319387..1319590 1 NC_010803.1 KEGG: cph:Cpha266_1691 hypothetical protein; hypothetical protein 1319590 6355323 Clim_1222 Chlorobium limicola DSM 245 hypothetical protein YP_001943268.1 1319387 D 290315 CDS YP_001943269.1 189346740 6355324 1319791..1320291 1 NC_010803.1 PFAM: protein of unknown function DUF1499; KEGG: cph:Cpha266_0483 protein of unknown function DUF1499; hypothetical protein 1320291 6355324 Clim_1223 Chlorobium limicola DSM 245 hypothetical protein YP_001943269.1 1319791 D 290315 CDS YP_001943270.1 189346741 6355325 complement(1320419..1321462) 1 NC_010803.1 KEGG: cph:Cpha266_1229 succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase/aspartoacylase 1321462 6355325 Clim_1224 Chlorobium limicola DSM 245 succinylglutamate desuccinylase/aspartoacylase YP_001943270.1 1320419 R 290315 CDS YP_001943271.1 189346742 6355326 complement(1321450..1322883) 1 NC_010803.1 KEGG: cph:Cpha266_1230 hypothetical protein; hypothetical protein 1322883 6355326 Clim_1225 Chlorobium limicola DSM 245 hypothetical protein YP_001943271.1 1321450 R 290315 CDS YP_001943272.1 189346743 6355327 1323145..1323726 1 NC_010803.1 hypothetical protein 1323726 6355327 Clim_1226 Chlorobium limicola DSM 245 hypothetical protein YP_001943272.1 1323145 D 290315 CDS YP_001943273.1 189346744 6355328 1323786..1324433 1 NC_010803.1 PFAM: protein of unknown function DUF477; KEGG: cch:Cag_1771 hypothetical protein; hypothetical protein 1324433 6355328 Clim_1227 Chlorobium limicola DSM 245 hypothetical protein YP_001943273.1 1323786 D 290315 CDS YP_001943274.1 189346745 6355329 1324430..1325377 1 NC_010803.1 PFAM: protein of unknown function DUF477; KEGG: lbi:LEPBI_I3031 hypothetical protein; hypothetical protein 1325377 6355329 Clim_1228 Chlorobium limicola DSM 245 hypothetical protein YP_001943274.1 1324430 D 290315 CDS YP_001943275.1 189346746 6355330 1325601..1327238 1 NC_010803.1 PFAM: ferredoxin-dependent glutamate synthase; Rieske [2Fe-2S] domain protein; KEGG: jan:Jann_3121 ferredoxin-dependent glutamate synthase; ferredoxin-dependent glutamate synthase 1327238 6355330 Clim_1229 Chlorobium limicola DSM 245 ferredoxin-dependent glutamate synthase YP_001943275.1 1325601 D 290315 CDS YP_001943276.1 189346747 6355331 1327363..1328121 1 NC_010803.1 PFAM: peptidase M50; KEGG: cph:Cpha266_1573 peptidase M50; peptidase M50 1328121 6355331 Clim_1230 Chlorobium limicola DSM 245 peptidase M50 YP_001943276.1 1327363 D 290315 CDS YP_001943277.1 189346748 6355332 complement(1328437..1330269) 1 NC_010803.1 PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: cph:Cpha266_1306 ATP citrate lyase subunit 2; ATP-citrate lyase/succinyl-CoA ligase 1330269 6355332 Clim_1231 Chlorobium limicola DSM 245 ATP-citrate lyase/succinyl-CoA ligase YP_001943277.1 1328437 R 290315 CDS YP_001943278.1 189346749 6355333 complement(1330333..1331529) 1 NC_010803.1 PFAM: ATP-grasp domain protein; KEGG: cph:Cpha266_1307 ATP citrate lyase subunit 1; ATP-grasp domain-containing protein 1331529 6355333 Clim_1232 Chlorobium limicola DSM 245 ATP-grasp domain-containing protein YP_001943278.1 1330333 R 290315 CDS YP_001943279.1 189346750 6355334 1331666..1332526 1 NC_010803.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 1332526 6355334 Clim_1233 Chlorobium limicola DSM 245 prolipoprotein diacylglyceryl transferase YP_001943279.1 1331666 D 290315 CDS YP_001943280.1 189346751 6355335 complement(1332509..1333294) 1 NC_010803.1 PFAM: conserved hypothetical protein; KEGG: plt:Plut_1058 hypothetical protein; hypothetical protein 1333294 6355335 Clim_1234 Chlorobium limicola DSM 245 hypothetical protein YP_001943280.1 1332509 R 290315 CDS YP_001943281.1 189346752 6355336 complement(1333291..1333968) 1 NC_010803.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: pvi:Cvib_0871 ABC transporter; ABC transporter 1333968 6355336 Clim_1235 Chlorobium limicola DSM 245 ABC transporter YP_001943281.1 1333291 R 290315 CDS YP_001943282.1 189346753 6355337 1334081..1336660 1 NC_010803.1 KEGG: cte:CT1094 hypothetical protein; hypothetical protein 1336660 6355337 Clim_1236 Chlorobium limicola DSM 245 hypothetical protein YP_001943282.1 1334081 D 290315 CDS YP_001943283.1 189346754 6355338 complement(1336738..1337394) 1 NC_010803.1 PFAM: protein of unknown function UPF0016; KEGG: cph:Cpha266_1312 protein of unknown function UPF0016; hypothetical protein 1337394 6355338 Clim_1237 Chlorobium limicola DSM 245 hypothetical protein YP_001943283.1 1336738 R 290315 CDS YP_001943284.1 189346755 6355339 complement(1337569..1338108) 1 NC_010803.1 PFAM: Lipocalin-related protein and Bos/Can/Equ allergen; Lipocalin family protein; KEGG: cph:Cpha266_1313 lipocalin family protein; lipocalin family protein 1338108 6355339 Clim_1238 Chlorobium limicola DSM 245 lipocalin family protein YP_001943284.1 1337569 R 290315 CDS YP_001943285.1 189346756 6355340 1338219..1338680 1 NC_010803.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cph:Cpha266_1314 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1338680 6355340 Clim_1239 Chlorobium limicola DSM 245 N-acetyltransferase GCN5 YP_001943285.1 1338219 D 290315 CDS YP_001943286.1 189346757 6355341 1338698..1338865 1 NC_010803.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: cph:Cpha266_1315 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 1338865 6355341 Clim_1240 Chlorobium limicola DSM 245 rubredoxin-type Fe(Cys)4 protein YP_001943286.1 1338698 D 290315 CDS YP_001943287.1 189346758 6355342 complement(1339328..1340578) 1 NC_010803.1 PFAM: protein of unknown function DUF214; KEGG: cph:Cpha266_1316 protein of unknown function DUF214; hypothetical protein 1340578 6355342 Clim_1241 Chlorobium limicola DSM 245 hypothetical protein YP_001943287.1 1339328 R 290315 CDS YP_001943288.1 189346759 6355343 complement(1340597..1341865) 1 NC_010803.1 PFAM: protein of unknown function DUF214; KEGG: cph:Cpha266_1317 protein of unknown function DUF214; hypothetical protein 1341865 6355343 Clim_1242 Chlorobium limicola DSM 245 hypothetical protein YP_001943288.1 1340597 R 290315 CDS YP_001943289.1 189346760 6355344 complement(1341862..1343121) 1 NC_010803.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: plt:Plut_1051 diguanylate cyclase (GGDEF domain); diguanylate cyclase 1343121 6355344 Clim_1243 Chlorobium limicola DSM 245 diguanylate cyclase YP_001943289.1 1341862 R 290315 CDS YP_001943290.1 189346761 6355345 complement(1343126..1344085) 1 NC_010803.1 KEGG: cph:Cpha266_1319 phosphate-binding protein; phosphate-binding protein 1344085 6355345 Clim_1244 Chlorobium limicola DSM 245 phosphate-binding protein YP_001943290.1 1343126 R 290315 CDS YP_001943291.1 189346762 6355346 1344377..1345414 1 NC_010803.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 1345414 argC 6355346 argC Chlorobium limicola DSM 245 N-acetyl-gamma-glutamyl-phosphate reductase YP_001943291.1 1344377 D 290315 CDS YP_001943292.1 189346763 6355347 1345438..1346724 1 NC_010803.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 1346724 argJ 6355347 argJ Chlorobium limicola DSM 245 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_001943292.1 1345438 D 290315 CDS YP_001943293.1 189346764 6355348 1346768..1347682 1 NC_010803.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 1347682 6355348 Clim_1247 Chlorobium limicola DSM 245 acetylglutamate kinase YP_001943293.1 1346768 D 290315 CDS YP_001943294.1 189346765 6355349 1347689..1348705 1 NC_010803.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 1348705 6355349 Clim_1248 Chlorobium limicola DSM 245 ornithine carbamoyltransferase YP_001943294.1 1347689 D 290315 CDS YP_001943295.1 189346766 6355350 1348710..1349156 1 NC_010803.1 PFAM: arginine repressor; KEGG: cph:Cpha266_1324 transcriptional regulator, ArgR family; arginine repressor ArgR 1349156 6355350 Clim_1249 Chlorobium limicola DSM 245 arginine repressor ArgR YP_001943295.1 1348710 D 290315 CDS YP_001943296.1 189346767 6355351 1349175..1350377 1 NC_010803.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 1350377 6355351 Clim_1250 Chlorobium limicola DSM 245 argininosuccinate synthase YP_001943296.1 1349175 D 290315 CDS YP_001943297.1 189346768 6355352 1350487..1351878 1 NC_010803.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 1351878 6355352 Clim_1251 Chlorobium limicola DSM 245 argininosuccinate lyase YP_001943297.1 1350487 D 290315 CDS YP_001943298.1 189346769 6355353 complement(1351892..1353985) 1 NC_010803.1 KEGG: cph:Cpha266_1328 C-terminal processing peptidase-1. Serine peptidase. MEROPS family S41A; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 1353985 6355353 Clim_1252 Chlorobium limicola DSM 245 carboxyl-terminal protease YP_001943298.1 1351892 R 290315 CDS YP_001943299.1 189346770 6355354 1354123..1355097 1 NC_010803.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 1355097 6355354 Clim_1253 Chlorobium limicola DSM 245 fructose-bisphosphate aldolase YP_001943299.1 1354123 D 290315 CDS YP_001943300.1 189346771 6355355 complement(1355185..1356399) 1 NC_010803.1 KEGG: cph:Cpha266_1330 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 1356399 6355355 Clim_1254 Chlorobium limicola DSM 245 amidohydrolase YP_001943300.1 1355185 R 290315 CDS YP_001943301.1 189346772 6355356 1356760..1357488 1 NC_010803.1 PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; KEGG: pvi:Cvib_0894 prophage repressor; XRE family transcriptional regulator 1357488 6355356 Clim_1255 Chlorobium limicola DSM 245 XRE family transcriptional regulator YP_001943301.1 1356760 D 290315 CDS YP_001943302.1 189346773 6355357 complement(1357593..1358558) 1 NC_010803.1 PFAM: protein of unknown function DUF1568; KEGG: cph:Cpha266_1487 protein of unknown function DUF1568; hypothetical protein 1358558 6355357 Clim_1256 Chlorobium limicola DSM 245 hypothetical protein YP_001943302.1 1357593 R 290315 CDS YP_001943303.1 189346774 6355358 complement(1358662..1359354) 1 NC_010803.1 PFAM: CBS domain containing protein; KEGG: cph:Cpha266_1331 CBS domain containing protein; signal transduction protein with CBS domains 1359354 6355358 Clim_1257 Chlorobium limicola DSM 245 signal transduction protein with CBS domains YP_001943303.1 1358662 R 290315 CDS YP_001943304.1 189346775 6355359 complement(1359345..1359779) 1 NC_010803.1 KEGG: cph:Cpha266_1332 ribose-5-phosphate isomerase; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; RpiB/LacA/LacB family sugar-phosphate isomerase 1359779 6355359 Clim_1258 Chlorobium limicola DSM 245 RpiB/LacA/LacB family sugar-phosphate isomerase YP_001943304.1 1359345 R 290315 CDS YP_001943305.1 189346776 6355360 complement(1359776..1361917) 1 NC_010803.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 1361917 6355360 Clim_1259 Chlorobium limicola DSM 245 polyphosphate kinase YP_001943305.1 1359776 R 290315 CDS YP_001943306.1 189346777 6355361 complement(1361932..1362519) 1 NC_010803.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: cph:Cpha266_1334 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 1362519 6355361 Clim_1260 Chlorobium limicola DSM 245 5-formyltetrahydrofolate cyclo-ligase YP_001943306.1 1361932 R 290315 CDS YP_001943307.1 189346778 6355362 1362697..1363437 1 NC_010803.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: cph:Cpha266_1335 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase 1363437 6355362 Clim_1261 Chlorobium limicola DSM 245 fumarylacetoacetate (FAA) hydrolase YP_001943307.1 1362697 D 290315 CDS YP_001943308.1 189346779 6355363 1363484..1364806 1 NC_010803.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 1364806 pyrC 6355363 pyrC Chlorobium limicola DSM 245 dihydroorotase YP_001943308.1 1363484 D 290315 CDS YP_001943309.1 189346780 6355364 1364922..1365116 1 NC_010803.1 KEGG: cph:Cpha266_1337 hypothetical protein; hypothetical protein 1365116 6355364 Clim_1263 Chlorobium limicola DSM 245 hypothetical protein YP_001943309.1 1364922 D 290315 CDS YP_001943310.1 189346781 6355365 1365191..1365979 1 NC_010803.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: plt:Plut_1011 methyltransferase; type 11 methyltransferase 1365979 6355365 Clim_1264 Chlorobium limicola DSM 245 type 11 methyltransferase YP_001943310.1 1365191 D 290315 CDS YP_001943311.1 189346782 6355366 complement(1365994..1366611) 1 NC_010803.1 KEGG: pvi:Cvib_0903 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 1366611 6355366 Clim_1265 Chlorobium limicola DSM 245 DNA polymerase III subunit epsilon YP_001943311.1 1365994 R 290315 CDS YP_001943312.1 189346783 6355367 complement(1366685..1368634) 1 NC_010803.1 PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase KEGG: pvi:Cvib_0904 cyclic nucleotide-binding protein; CBS domain and cyclic nucleotide-regulated nucleotidyltransferase 1368634 6355367 Clim_1266 Chlorobium limicola DSM 245 CBS domain and cyclic nucleotide-regulated nucleotidyltransferase YP_001943312.1 1366685 R 290315 CDS YP_001943313.1 189346784 6355368 complement(1368747..1369739) 1 NC_010803.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cph:Cpha266_1339 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1369739 6355368 Clim_1267 Chlorobium limicola DSM 245 NAD-dependent epimerase/dehydratase YP_001943313.1 1368747 R 290315 CDS YP_001943314.1 189346785 6355369 complement(1369806..1370831) 1 NC_010803.1 PFAM: basic membrane lipoprotein; KEGG: cph:Cpha266_1340 basic membrane lipoprotein; basic membrane lipoprotein 1370831 6355369 Clim_1268 Chlorobium limicola DSM 245 basic membrane lipoprotein YP_001943314.1 1369806 R 290315 CDS YP_001943315.1 189346786 6355370 1371062..1372729 1 NC_010803.1 PFAM: CHAD domain containing protein; KEGG: cph:Cpha266_1341 CHAD domain containing protein; CHAD domain-containing protein 1372729 6355370 Clim_1269 Chlorobium limicola DSM 245 CHAD domain-containing protein YP_001943315.1 1371062 D 290315 CDS YP_001943316.1 189346787 6355371 1372736..1373485 1 NC_010803.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cph:Cpha266_1342 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase 1373485 6355371 Clim_1270 Chlorobium limicola DSM 245 Cobyrinic acid ac-diamide synthase YP_001943316.1 1372736 D 290315 CDS YP_001943317.1 189346788 6355372 complement(1373703..1374512) 1 NC_010803.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cch:Cag_0383 oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 1374512 6355372 Clim_1271 Chlorobium limicola DSM 245 short-chain dehydrogenase/reductase SDR YP_001943317.1 1373703 R 290315 CDS YP_001943318.1 189346789 6355373 complement(1374518..1375168) 1 NC_010803.1 PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: cph:Cpha266_1343 peptidase M15D, VanX D-ala-D-ala dipeptidase; peptidase M15D vanX D-ala-D-ala dipeptidase 1375168 6355373 Clim_1272 Chlorobium limicola DSM 245 peptidase M15D vanX D-ala-D-ala dipeptidase YP_001943318.1 1374518 R 290315 CDS YP_001943319.1 189346790 6355374 complement(1375177..1375791) 1 NC_010803.1 TIGRFAM: yecA family protein; KEGG: cph:Cpha266_0914 YecA family protein; yecA family protein 1375791 6355374 Clim_1273 Chlorobium limicola DSM 245 yecA family protein YP_001943319.1 1375177 R 290315 CDS YP_001943320.1 189346791 6355375 1376159..1376782 1 NC_010803.1 PFAM: NLP/P60 protein; KEGG: plt:Plut_0897 NLP/P60 family protein; NLP/P60 protein 1376782 6355375 Clim_1274 Chlorobium limicola DSM 245 NLP/P60 protein YP_001943320.1 1376159 D 290315 CDS YP_001943321.1 189346792 6355376 1376881..1377681 1 NC_010803.1 KEGG: plt:Plut_1030 hypothetical protein; hypothetical protein 1377681 6355376 Clim_1275 Chlorobium limicola DSM 245 hypothetical protein YP_001943321.1 1376881 D 290315 CDS YP_001943322.1 189346793 6355377 complement(1377758..1378576) 1 NC_010803.1 PFAM: penicillin-binding protein transpeptidase; KEGG: psa:PST_2699 probable beta-lactamase; beta-lactamase 1378576 6355377 Clim_1276 Chlorobium limicola DSM 245 beta-lactamase YP_001943322.1 1377758 R 290315 CDS YP_001943323.1 189346794 6355378 1378919..1379107 1 NC_010803.1 KEGG: cch:Cag_0509 hypothetical protein; hypothetical protein 1379107 6355378 Clim_1277 Chlorobium limicola DSM 245 hypothetical protein YP_001943323.1 1378919 D 290315 CDS YP_001943324.1 189346795 6355379 1379278..1379541 1 NC_010803.1 KEGG: cph:Cpha266_2106 hypothetical protein; hypothetical protein 1379541 6355379 Clim_1278 Chlorobium limicola DSM 245 hypothetical protein YP_001943324.1 1379278 D 290315 CDS YP_001943325.1 189346796 6355380 complement(1379586..1380293) 1 NC_010803.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ppd:Ppro_3713 ABC transporter; ABC transporter 1380293 6355380 Clim_1279 Chlorobium limicola DSM 245 ABC transporter YP_001943325.1 1379586 R 290315 CDS YP_001943326.1 189346797 6355381 complement(1380295..1381488) 1 NC_010803.1 PFAM: protein of unknown function DUF214; KEGG: gsu:GSU0948 ABC transporter, permease protein; hypothetical protein 1381488 6355381 Clim_1280 Chlorobium limicola DSM 245 hypothetical protein YP_001943326.1 1380295 R 290315 CDS YP_001943327.1 189346798 6355382 complement(1381492..1382565) 1 NC_010803.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: afw:Anae109_1045 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1382565 6355382 Clim_1281 Chlorobium limicola DSM 245 RND family efflux transporter MFP subunit YP_001943327.1 1381492 R 290315 CDS YP_001943328.1 189346799 6355383 complement(1382565..1383905) 1 NC_010803.1 PFAM: outer membrane efflux protein; KEGG: gme:Gmet_3465 outer membrane efflux protein; outer membrane efflux protein 1383905 6355383 Clim_1282 Chlorobium limicola DSM 245 outer membrane efflux protein YP_001943328.1 1382565 R 290315 CDS YP_001943329.1 189346800 6355384 1384011..1384610 1 NC_010803.1 PFAM: regulatory protein TetR; KEGG: ppd:Ppro_3852 TetR family transcriptional regulator; TetR family transcriptional regulator 1384610 6355384 Clim_1283 Chlorobium limicola DSM 245 TetR family transcriptional regulator YP_001943329.1 1384011 D 290315 CDS YP_001943330.1 189346801 6355385 complement(1384669..1385361) 1 NC_010803.1 KEGG: plt:Plut_2079 Fibrobacter succinogenes major paralogous domain; hypothetical protein 1385361 6355385 Clim_1284 Chlorobium limicola DSM 245 hypothetical protein YP_001943330.1 1384669 R 290315 CDS YP_001943331.1 189346802 6355386 complement(1385504..1385890) 1 NC_010803.1 KEGG: plt:Plut_0346 hypothetical protein; hypothetical protein 1385890 6355386 Clim_1285 Chlorobium limicola DSM 245 hypothetical protein YP_001943331.1 1385504 R 290315 CDS YP_001943332.1 189346803 6355387 complement(1385972..1386274) 1 NC_010803.1 KEGG: plt:Plut_0345 hypothetical protein; hypothetical protein 1386274 6355387 Clim_1286 Chlorobium limicola DSM 245 hypothetical protein YP_001943332.1 1385972 R 290315 CDS YP_001943333.1 189346804 6355388 complement(1386526..1387884) 1 NC_010803.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: plt:Plut_0344 two component transcriptional regulator, fis family; two component sigma-54 specific Fis family transcriptional regulator 1387884 6355388 Clim_1287 Chlorobium limicola DSM 245 two component sigma-54 specific Fis family transcriptional regulator YP_001943333.1 1386526 R 290315 CDS YP_001943334.1 189346805 6356214 complement(1387928..1389967) 1 NC_010803.1 KEGG: plt:Plut_0343 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; signal transduction histidine kinase, nitrogen specific, NtrB 1389967 6356214 Clim_1288 Chlorobium limicola DSM 245 signal transduction histidine kinase, nitrogen specific, NtrB YP_001943334.1 1387928 R 290315 CDS YP_001943335.1 189346806 6356215 complement(1390090..1390509) 1 NC_010803.1 PFAM: cytochrome c class I; KEGG: cph:Cpha266_0171 C-type cytochrome; cytochrome c class I 1390509 6356215 Clim_1289 Chlorobium limicola DSM 245 cytochrome c class I YP_001943335.1 1390090 R 290315 CDS YP_001943336.1 189346807 6356216 1390903..1391457 1 NC_010803.1 KEGG: cch:Cag_0441 hypothetical protein; hypothetical protein 1391457 6356216 Clim_1290 Chlorobium limicola DSM 245 hypothetical protein YP_001943336.1 1390903 D 290315 CDS YP_001943337.1 189346808 6356217 1391472..1392140 1 NC_010803.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cph:Cpha266_1205 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 1392140 6356217 Clim_1291 Chlorobium limicola DSM 245 winged helix family two component transcriptional regulator YP_001943337.1 1391472 D 290315 CDS YP_001943338.1 189346809 6356218 1392141..1393628 1 NC_010803.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cch:Cag_0439 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1393628 6356218 Clim_1292 Chlorobium limicola DSM 245 integral membrane sensor signal transduction histidine kinase YP_001943338.1 1392141 D 290315 CDS YP_001943339.1 189346810 6356219 1393669..1395279 1 NC_010803.1 KEGG: ter:Tery_2635 hypothetical protein; hypothetical protein 1395279 6356219 Clim_1293 Chlorobium limicola DSM 245 hypothetical protein YP_001943339.1 1393669 D 290315 CDS YP_001943340.1 189346811 6356220 complement(1395439..1396359) 1 NC_010803.1 PFAM: Integrase catalytic region; KEGG: cph:Cpha266_1954 integrase, catalytic region; integrase catalytic subunit 1396359 6356220 Clim_1294 Chlorobium limicola DSM 245 integrase catalytic subunit YP_001943340.1 1395439 R 290315 CDS YP_001943341.1 189346812 6356221 complement(1396356..1396649) 1 NC_010803.1 PFAM: transposase IS3/IS911 family protein; KEGG: cph:Cpha266_2113 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1396649 6356221 Clim_1295 Chlorobium limicola DSM 245 transposase IS3/IS911 family protein YP_001943341.1 1396356 R 290315 CDS YP_001943342.1 189346813 6355389 1397247..1398086 1 NC_010803.1 KEGG: cch:Cag_1146 hypothetical protein; hypothetical protein 1398086 6355389 Clim_1297 Chlorobium limicola DSM 245 hypothetical protein YP_001943342.1 1397247 D 290315 CDS YP_001943343.1 189346814 6354491 complement(1398083..1398529) 1 NC_010803.1 KEGG: pna:Pnap_4508 hypothetical protein; hypothetical protein 1398529 6354491 Clim_1298 Chlorobium limicola DSM 245 hypothetical protein YP_001943343.1 1398083 R 290315 CDS YP_001943344.1 189346815 6354492 complement(1398995..1399294) 1 NC_010803.1 PFAM: plasmid stabilization system; KEGG: gvi:gsr3505 hypothetical protein; plasmid stabilization system 1399294 6354492 Clim_1299 Chlorobium limicola DSM 245 plasmid stabilization system YP_001943344.1 1398995 R 290315 CDS YP_001943345.1 189346816 6354493 complement(1399308..1399559) 1 NC_010803.1 TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: gvi:gsr2534 hypothetical protein; CopG/Arc/MetJ family addiction module antidote protein 1399559 6354493 Clim_1300 Chlorobium limicola DSM 245 CopG/Arc/MetJ family addiction module antidote protein YP_001943345.1 1399308 R 290315 CDS YP_001943346.1 189346817 6354494 complement(1399753..1400097) 1 NC_010803.1 hypothetical protein 1400097 6354494 Clim_1301 Chlorobium limicola DSM 245 hypothetical protein YP_001943346.1 1399753 R 290315 CDS YP_001943347.1 189346818 6354495 1400183..1400521 1 NC_010803.1 TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: dde:Dde_0501 hypothetical protein; addiction module killer protein 1400521 6354495 Clim_1302 Chlorobium limicola DSM 245 addiction module killer protein YP_001943347.1 1400183 D 290315 CDS YP_001943348.1 189346819 6354496 1400493..1400783 1 NC_010803.1 TIGRFAM: addiction module antidote protein; KEGG: pvi:Cvib_0663 transcriptional regulator; transcriptional regulator 1400783 6354496 Clim_1303 Chlorobium limicola DSM 245 transcriptional regulator YP_001943348.1 1400493 D 290315 CDS YP_001943349.1 189346820 6354497 complement(1400925..1401701) 1 NC_010803.1 PFAM: Integrase catalytic region; KEGG: cph:Cpha266_2112 integrase, catalytic region; integrase catalytic subunit 1401701 6354497 Clim_1304 Chlorobium limicola DSM 245 integrase catalytic subunit YP_001943349.1 1400925 R 290315 CDS YP_001943350.1 189346821 6354498 complement(1401698..1401991) 1 NC_010803.1 PFAM: transposase IS3/IS911 family protein; KEGG: cph:Cpha266_2113 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1401991 6354498 Clim_1305 Chlorobium limicola DSM 245 transposase IS3/IS911 family protein YP_001943350.1 1401698 R 290315 CDS YP_001943351.1 189346822 6354499 1402244..1406713 1 NC_010803.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Haemagluttinin repeat-containing protein; KEGG: cph:Cpha266_1203 outer membrane autotransporter barrel domain; outer membrane autotransporter barrel domain-containing protein 1406713 6354499 Clim_1306 Chlorobium limicola DSM 245 outer membrane autotransporter barrel domain-containing protein YP_001943351.1 1402244 D 290315 CDS YP_001943352.1 189346823 6354500 1407084..1408130 1 NC_010803.1 KEGG: cph:Cpha266_2139 transposase and inactivated derivatives; transposase and inactivated derivatives 1408130 6354500 Clim_1307 Chlorobium limicola DSM 245 transposase and inactivated derivatives YP_001943352.1 1407084 D 290315 CDS YP_001943353.1 189346824 6354501 1408800..1409726 1 NC_010803.1 PFAM: Haemagluttinin domain protein; KEGG: rsp:RSP_4120 hypothetical protein; hemagglutinin domain-containing protein 1409726 6354501 Clim_1308 Chlorobium limicola DSM 245 hemagglutinin domain-containing protein YP_001943353.1 1408800 D 290315 CDS YP_001943354.1 189346825 6354502 1409851..1410318 1 NC_010803.1 KEGG: ppd:Ppro_3601 transposase, IS4 family protein; transposase, IS4 family protein 1410318 6354502 Clim_1309 Chlorobium limicola DSM 245 transposase, IS4 family protein YP_001943354.1 1409851 D 290315 CDS YP_001943355.1 189346826 6354503 1410414..1411439 1 NC_010803.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: hip:CGSHiEE_05405 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein repeat-containing protein 1411439 6354503 Clim_1310 Chlorobium limicola DSM 245 Sel1 domain-containing protein repeat-containing protein YP_001943355.1 1410414 D 290315 CDS YP_001943356.1 189346827 6354504 complement(1411571..1412560) 1 NC_010803.1 KEGG: cph:Cpha266_1005 hypothetical protein; hypothetical protein 1412560 6354504 Clim_1311 Chlorobium limicola DSM 245 hypothetical protein YP_001943356.1 1411571 R 290315 CDS YP_001943357.1 189346828 6354505 complement(1412882..1414759) 1 NC_010803.1 PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain; KEGG: cte:CT1075 thiol:disulfide interchange protein DsbD; Protein-disulfide reductase 1414759 6354505 Clim_1312 Chlorobium limicola DSM 245 Protein-disulfide reductase YP_001943357.1 1412882 R 290315 CDS YP_001943358.1 189346829 6354506 complement(1414767..1415315) 1 NC_010803.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cph:Cpha266_0469 redoxin domain protein; redoxin domain-containing protein 1415315 6354506 Clim_1313 Chlorobium limicola DSM 245 redoxin domain-containing protein YP_001943358.1 1414767 R 290315 CDS YP_001943359.1 189346830 6354507 complement(1415411..1415911) 1 NC_010803.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: cph:Cpha266_1350 cupin 2, conserved barrel domain protein; cupin 1415911 6354507 Clim_1314 Chlorobium limicola DSM 245 cupin YP_001943359.1 1415411 R 290315 CDS YP_001943360.1 189346831 6354508 complement(1416028..1419699) 1 NC_010803.1 PFAM: SMC domain protein; KEGG: cph:Cpha266_1354 SMC domain protein; SMC domain-containing protein 1419699 6354508 Clim_1315 Chlorobium limicola DSM 245 SMC domain-containing protein YP_001943360.1 1416028 R 290315 CDS YP_001943361.1 189346832 6354509 complement(1419863..1421008) 1 NC_010803.1 PFAM: malic protein domain protein; malic protein NAD-binding; KEGG: plt:Plut_0896 malate dehydrogenase (oxaloacetate decarboxylating); malate dehydrogenase 1421008 6354509 Clim_1316 Chlorobium limicola DSM 245 malate dehydrogenase YP_001943361.1 1419863 R 290315 CDS YP_001943362.1 189346833 6354510 complement(1421554..1421775) 1 NC_010803.1 KEGG: cph:Cpha266_2432 hypothetical protein; hypothetical protein 1421775 6354510 Clim_1317 Chlorobium limicola DSM 245 hypothetical protein YP_001943362.1 1421554 R 290315 CDS YP_001943363.1 189346834 6354511 complement(1421838..1422836) 1 NC_010803.1 KEGG: cph:Cpha266_2433 hypothetical protein; hypothetical protein 1422836 6354511 Clim_1318 Chlorobium limicola DSM 245 hypothetical protein YP_001943363.1 1421838 R 290315 CDS YP_001943364.1 189346835 6354512 complement(1422965..1424200) 1 NC_010803.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: cph:Cpha266_1371 exodeoxyribonuclease I subunit D; nuclease SbcCD subunit D 1424200 6354512 Clim_1319 Chlorobium limicola DSM 245 nuclease SbcCD subunit D YP_001943364.1 1422965 R 290315 CDS YP_001943365.1 189346836 6354513 complement(1424202..1425074) 1 NC_010803.1 PFAM: Ion transport 2 domain protein; KEGG: cph:Cpha266_1372 ion transport 2 domain protein; Ion transport 2 domain-containing protein 1425074 6354513 Clim_1320 Chlorobium limicola DSM 245 Ion transport 2 domain-containing protein YP_001943365.1 1424202 R 290315 CDS YP_001943366.1 189346837 6354514 complement(1425190..1425387) 1 NC_010803.1 hypothetical protein 1425387 6354514 Clim_1321 Chlorobium limicola DSM 245 hypothetical protein YP_001943366.1 1425190 R 290315 CDS YP_001943367.1 189346838 6354515 complement(1425897..1426622) 1 NC_010803.1 KEGG: hne:HNE_3258 lipoprotein; hypothetical protein 1426622 6354515 Clim_1322 Chlorobium limicola DSM 245 hypothetical protein YP_001943367.1 1425897 R 290315 CDS YP_001943368.1 189346839 6354516 complement(1426744..1427211) 1 NC_010803.1 KEGG: cte:CT1238 hypothetical protein; hypothetical protein 1427211 6354516 Clim_1323 Chlorobium limicola DSM 245 hypothetical protein YP_001943368.1 1426744 R 290315 CDS YP_001943369.1 189346840 6354517 complement(1427679..1430054) 1 NC_010803.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: cte:CT1524 phosphoketolase; phosphoketolase 1430054 6354517 Clim_1324 Chlorobium limicola DSM 245 phosphoketolase YP_001943369.1 1427679 R 290315 CDS YP_001943370.1 189346841 6354518 complement(1430156..1431349) 1 NC_010803.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: cte:CT1525 acetate kinase; acetate kinase 1431349 6354518 Clim_1325 Chlorobium limicola DSM 245 acetate kinase YP_001943370.1 1430156 R 290315 CDS YP_001943371.1 189346842 6354519 1431720..1431962 1 NC_010803.1 KEGG: cph:Cpha266_1379 CopG family transcriptional regulator; CopG family transcriptional regulator 1431962 6354519 Clim_1326 Chlorobium limicola DSM 245 CopG family transcriptional regulator YP_001943371.1 1431720 D 290315 CDS YP_001943372.1 189346843 6354520 1431947..1432165 1 NC_010803.1 KEGG: cph:Cpha266_1380 MazF family transcriptional regulator; MazF family transcriptional regulator 1432165 6354520 Clim_1327 Chlorobium limicola DSM 245 MazF family transcriptional regulator YP_001943372.1 1431947 D 290315 CDS YP_001943373.1 189346844 6354523 1432804..1435365 1 NC_010803.1 TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: lbl:LBL_0797 membrane alanyl aminopeptidase; aminopeptidase N 1435365 6354523 Clim_1330 Chlorobium limicola DSM 245 aminopeptidase N YP_001943373.1 1432804 D 290315 CDS YP_001943374.1 189346845 6354526 1435835..1436098 1 NC_010803.1 KEGG: ppd:Ppro_3838 hypothetical protein; hypothetical protein 1436098 6354526 Clim_1333 Chlorobium limicola DSM 245 hypothetical protein YP_001943374.1 1435835 D 290315 CDS YP_001943375.1 189346846 6354527 1436188..1436400 1 NC_010803.1 KEGG: cph:Cpha266_1481 RNA-directed DNA polymerase (reverse transcriptase); RNA-directed DNA polymerase 1436400 6354527 Clim_1334 Chlorobium limicola DSM 245 RNA-directed DNA polymerase YP_001943375.1 1436188 D 290315 CDS YP_001943376.1 189346847 6354528 1436397..1436660 1 NC_010803.1 hypothetical protein 1436660 6354528 Clim_1335 Chlorobium limicola DSM 245 hypothetical protein YP_001943376.1 1436397 D 290315 CDS YP_001943377.1 189346848 6354529 1436612..1436920 1 NC_010803.1 KEGG: aba:Acid345_4147 hypothetical protein; hypothetical protein 1436920 6354529 Clim_1336 Chlorobium limicola DSM 245 hypothetical protein YP_001943377.1 1436612 D 290315 CDS YP_001943378.1 189346849 6354530 1436958..1437368 1 NC_010803.1 PFAM: helix-turn-helix domain protein; KEGG: cph:Cpha266_1375 XRE family transcriptional regulator; XRE family transcriptional regulator 1437368 6354530 Clim_1337 Chlorobium limicola DSM 245 XRE family transcriptional regulator YP_001943378.1 1436958 D 290315 CDS YP_001943379.1 189346850 6354531 complement(1437546..1437806) 1 NC_010803.1 TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: cph:Cpha266_1376 addiction module toxin, RelE/StbE family; RelE/StbE family addiction module toxin 1437806 6354531 Clim_1338 Chlorobium limicola DSM 245 RelE/StbE family addiction module toxin YP_001943379.1 1437546 R 290315 CDS YP_001943380.1 189346851 6354532 complement(1437790..1438038) 1 NC_010803.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: cph:Cpha266_1377 CopG family transcriptional regulator; DNA-binding domain-containing protein 1438038 6354532 Clim_1339 Chlorobium limicola DSM 245 DNA-binding domain-containing protein YP_001943380.1 1437790 R 290315 CDS YP_001943381.1 189346852 6354533 1438230..1438430 1 NC_010803.1 KEGG: cph:Cpha266_1378 hypothetical protein; hypothetical protein 1438430 6354533 Clim_1340 Chlorobium limicola DSM 245 hypothetical protein YP_001943381.1 1438230 D 290315 CDS YP_001943382.1 189346853 6354534 1438462..1438731 1 NC_010803.1 KEGG: gur:Gura_3957 hypothetical protein; hypothetical protein 1438731 6354534 Clim_1341 Chlorobium limicola DSM 245 hypothetical protein YP_001943382.1 1438462 D 290315 CDS YP_001943383.1 189346854 6354535 1438735..1438977 1 NC_010803.1 KEGG: cph:Cpha266_1387 hypothetical protein; hypothetical protein 1438977 6354535 Clim_1342 Chlorobium limicola DSM 245 hypothetical protein YP_001943383.1 1438735 D 290315 CDS YP_001943384.1 189346855 6354536 1439021..1439350 1 NC_010803.1 KEGG: cph:Cpha266_1388 hypothetical protein; hypothetical protein 1439350 6354536 Clim_1343 Chlorobium limicola DSM 245 hypothetical protein YP_001943384.1 1439021 D 290315 CDS YP_001943385.1 189346856 6354537 1439347..1439646 1 NC_010803.1 PFAM: plasmid stabilization system; KEGG: cph:Cpha266_1389 plasmid stabilization system; plasmid stabilization system 1439646 6354537 Clim_1344 Chlorobium limicola DSM 245 plasmid stabilization system YP_001943385.1 1439347 D 290315 CDS YP_001943386.1 189346857 6354538 complement(1439785..1440018) 1 NC_010803.1 KEGG: cph:Cpha266_1390 MazF family transcriptional regulator; MazF family transcriptional regulator 1440018 6354538 Clim_1345 Chlorobium limicola DSM 245 MazF family transcriptional regulator YP_001943386.1 1439785 R 290315 CDS YP_001943387.1 189346858 6354539 complement(1440117..1440329) 1 NC_010803.1 KEGG: cph:Cpha266_1391 hypothetical protein; hypothetical protein 1440329 6354539 Clim_1346 Chlorobium limicola DSM 245 hypothetical protein YP_001943387.1 1440117 R 290315 CDS YP_001943388.1 189346859 6354540 1440927..1441169 1 NC_010803.1 KEGG: cph:Cpha266_1379 CopG family transcriptional regulator; CopG family transcriptional regulator 1441169 6354540 Clim_1347 Chlorobium limicola DSM 245 CopG family transcriptional regulator YP_001943388.1 1440927 D 290315 CDS YP_001943389.1 189346860 6354541 1441154..1441492 1 NC_010803.1 PFAM: PemK family protein; KEGG: cph:Cpha266_1380 MazF family transcriptional regulator; MazF family transcriptional regulator 1441492 6354541 Clim_1348 Chlorobium limicola DSM 245 MazF family transcriptional regulator YP_001943389.1 1441154 D 290315 CDS YP_001943390.1 189346861 6354542 complement(1441537..1441785) 1 NC_010803.1 KEGG: cph:Cpha266_1392 protein of unknown function DUF1568; hypothetical protein 1441785 6354542 Clim_1349 Chlorobium limicola DSM 245 hypothetical protein YP_001943390.1 1441537 R 290315 CDS YP_001943391.1 189346862 6354543 complement(1441999..1444902) 1 NC_010803.1 PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: cno:NT01CX_0321 helicase; type III restriction protein res subunit 1444902 6354543 Clim_1350 Chlorobium limicola DSM 245 type III restriction protein res subunit YP_001943391.1 1441999 R 290315 CDS YP_001943392.1 189346863 6354545 1446298..1446603 1 NC_010803.1 KEGG: cph:Cpha266_2634 transposase, IS4 family protein; transposase, IS4 family protein 1446603 6354545 Clim_1352 Chlorobium limicola DSM 245 transposase, IS4 family protein YP_001943392.1 1446298 D 290315 CDS YP_001943393.1 189346864 6354546 complement(1446600..1449194) 1 NC_010803.1 PFAM: hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: sfr:Sfri_1847 hypothetical protein; hypothetical protein 1449194 6354546 Clim_1353 Chlorobium limicola DSM 245 hypothetical protein YP_001943393.1 1446600 R 290315 CDS YP_001943394.1 189346865 6354547 complement(1449187..1450830) 1 NC_010803.1 KEGG: sse:Ssed_3658 nucleoside phosphorylase-like protein; Nucleoside phosphorylase-like protein 1450830 6354547 Clim_1354 Chlorobium limicola DSM 245 Nucleoside phosphorylase-like protein YP_001943394.1 1449187 R 290315 CDS YP_001943395.1 189346866 6354549 complement(1451557..1452522) 1 NC_010803.1 PFAM: protein of unknown function DUF1568; KEGG: cph:Cpha266_2246 protein of unknown function DUF1568; hypothetical protein 1452522 6354549 Clim_1356 Chlorobium limicola DSM 245 hypothetical protein YP_001943395.1 1451557 R 290315 CDS YP_001943396.1 189346867 6354550 complement(1452644..1452736) 1 NC_010803.1 hypothetical protein 1452736 6354550 Clim_1357 Chlorobium limicola DSM 245 hypothetical protein YP_001943396.1 1452644 R 290315 CDS YP_001943397.1 189346868 6354551 complement(1452865..1454631) 1 NC_010803.1 TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: cph:Cpha266_1400 DNA helicase/exodeoxyribonuclease V, alpha subunit; exodeoxyribonuclease V subunit alpha 1454631 6354551 Clim_1358 Chlorobium limicola DSM 245 exodeoxyribonuclease V subunit alpha YP_001943397.1 1452865 R 290315 CDS YP_001943398.1 189346869 6354552 complement(1454628..1458308) 1 NC_010803.1 TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: cph:Cpha266_1401 DNA helicase/exodeoxyribonuclease V, beta subunit; exodeoxyribonuclease V subunit beta 1458308 6354552 Clim_1359 Chlorobium limicola DSM 245 exodeoxyribonuclease V subunit beta YP_001943398.1 1454628 R 290315 CDS YP_001943399.1 189346870 6353770 complement(1458305..1461538) 1 NC_010803.1 TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V RecC subunit; KEGG: cph:Cpha266_1402 DNA helicase/exodeoxyribonuclease V, gamma subunit; exodeoxyribonuclease V subunit gamma 1461538 6353770 Clim_1360 Chlorobium limicola DSM 245 exodeoxyribonuclease V subunit gamma YP_001943399.1 1458305 R 290315 CDS YP_001943400.1 189346871 6353771 complement(1461535..1462053) 1 NC_010803.1 PFAM: membrane-flanked domain; KEGG: cph:Cpha266_1403 hypothetical protein; hypothetical protein 1462053 6353771 Clim_1361 Chlorobium limicola DSM 245 hypothetical protein YP_001943400.1 1461535 R 290315 CDS YP_001943401.1 189346872 6353772 complement(1462084..1463412) 1 NC_010803.1 PFAM: conserved hypothetical protein; KEGG: cph:Cpha266_1404 conserved hypothetical protein 341; hypothetical protein 1463412 6353772 Clim_1362 Chlorobium limicola DSM 245 hypothetical protein YP_001943401.1 1462084 R 290315 CDS YP_001943402.1 189346873 6353773 1463530..1464804 1 NC_010803.1 PFAM: proteinase inhibitor I4 serpin; KEGG: scl:sce2877 serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member; proteinase inhibitor I4 serpin 1464804 6353773 Clim_1363 Chlorobium limicola DSM 245 proteinase inhibitor I4 serpin YP_001943402.1 1463530 D 290315 CDS YP_001943403.1 189346874 6353774 1464809..1466230 1 NC_010803.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: mgm:Mmc1_1145 deoxyribodipyrimidine photo-lyase; deoxyribodipyrimidine photo-lyase 1466230 6353774 Clim_1364 Chlorobium limicola DSM 245 deoxyribodipyrimidine photo-lyase YP_001943403.1 1464809 D 290315 CDS YP_001943404.1 189346875 6355629 1466287..1466559 1 NC_010803.1 KEGG: plt:Plut_1000 hypothetical protein; transcriptional regulator 1466559 6355629 Clim_1365 Chlorobium limicola DSM 245 transcriptional regulator YP_001943404.1 1466287 D 290315 CDS YP_001943405.1 189346876 6356135 1466645..1468090 1 NC_010803.1 KEGG: cph:Cpha266_1274 hypothetical protein; hypothetical protein 1468090 6356135 Clim_1366 Chlorobium limicola DSM 245 hypothetical protein YP_001943405.1 1466645 D 290315 CDS YP_001943406.1 189346877 6356136 complement(1468111..1468608) 1 NC_010803.1 PFAM: Protein of unknown function DUF1790; KEGG: pvi:Cvib_0087 hypothetical protein; hypothetical protein 1468608 6356136 Clim_1367 Chlorobium limicola DSM 245 hypothetical protein YP_001943406.1 1468111 R 290315 CDS YP_001943407.1 189346878 6356137 1469030..1469338 1 NC_010803.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: cph:Cpha266_1407 plasmid maintenance system antidote protein, XRE family; XRE family plasmid maintenance system antidote protein 1469338 6356137 Clim_1368 Chlorobium limicola DSM 245 XRE family plasmid maintenance system antidote protein YP_001943407.1 1469030 D 290315 CDS YP_001943408.1 189346879 6356138 1470075..1471301 1 NC_010803.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pvi:Cvib_0131 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1471301 6356138 Clim_1369 Chlorobium limicola DSM 245 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001943408.1 1470075 D 290315 CDS YP_001943409.1 189346880 6356139 complement(1471328..1472620) 1 NC_010803.1 PFAM: protein of unknown function DUF195; KEGG: cph:Cpha266_1053 protein of unknown function DUF195; hypothetical protein 1472620 6356139 Clim_1370 Chlorobium limicola DSM 245 hypothetical protein YP_001943409.1 1471328 R 290315 CDS YP_001943410.1 189346881 6356140 complement(1473049..1474053) 1 NC_010803.1 this fusion consists of methionine sulfoxide B reductase at the N-terminus and A at the C-terminus; A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress, S and R epimers of methionine sulfoxide, respectively; a fusion protein of these enzymes with thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae; bifunctional methionine sulfoxide reductase B/A protein 1474053 6356140 Clim_1371 Chlorobium limicola DSM 245 bifunctional methionine sulfoxide reductase B/A protein YP_001943410.1 1473049 R 290315 CDS YP_001943411.1 189346882 6356141 1474219..1476339 1 NC_010803.1 PFAM: protein of unknown function DUF255; KEGG: cph:Cpha266_1460 protein of unknown function DUF255; hypothetical protein 1476339 6356141 Clim_1372 Chlorobium limicola DSM 245 hypothetical protein YP_001943411.1 1474219 D 290315 CDS YP_001943412.1 189346883 6356142 complement(1476329..1476556) 1 NC_010803.1 KEGG: cph:Cpha266_1461 hypothetical protein; hypothetical protein 1476556 6356142 Clim_1373 Chlorobium limicola DSM 245 hypothetical protein YP_001943412.1 1476329 R 290315 CDS YP_001943413.1 189346884 6356144 complement(1476790..1477029) 1 NC_010803.1 KEGG: plt:Plut_0810 hypothetical protein; hypothetical protein 1477029 6356144 Clim_1374 Chlorobium limicola DSM 245 hypothetical protein YP_001943413.1 1476790 R 290315 CDS YP_001943414.1 189346885 6356145 1477320..1478777 1 NC_010803.1 PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: cph:Cpha266_1064 carbamoyl-phosphate synthase L chain, ATP-binding; carbamoyl-phosphate synthase L chain ATP-binding 1478777 6356145 Clim_1375 Chlorobium limicola DSM 245 carbamoyl-phosphate synthase L chain ATP-binding YP_001943414.1 1477320 D 290315 CDS YP_001943415.1 189346886 6356146 1478783..1480813 1 NC_010803.1 PFAM: biotin/lipoyl attachment domain-containing protein; pyruvate carboxyltransferase; KEGG: cph:Cpha266_1063 biotin/lipoyl attachment domain-containing protein; Oxaloacetate decarboxylase 1480813 6356146 Clim_1376 Chlorobium limicola DSM 245 Oxaloacetate decarboxylase YP_001943415.1 1478783 D 290315 CDS YP_001943416.1 189346887 6356147 1481100..1483931 1 NC_010803.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 1483931 sucA 6356147 sucA Chlorobium limicola DSM 245 2-oxoglutarate dehydrogenase E1 component YP_001943416.1 1481100 D 290315 CDS YP_001943417.1 189346888 6356148 1483941..1485188 1 NC_010803.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: reh:H16_A2324 dihydrolipoamide S-succinyltransferase (E2); 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 1485188 6356148 Clim_1378 Chlorobium limicola DSM 245 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_001943417.1 1483941 D 290315 CDS YP_001943418.1 189346889 6356149 1485148..1486638 1 NC_010803.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rso:RSc1271 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 1486638 6356149 Clim_1379 Chlorobium limicola DSM 245 dihydrolipoamide dehydrogenase YP_001943418.1 1485148 D 290315 CDS YP_001943419.1 189346890 6356150 1486909..1487625 1 NC_010803.1 PFAM: nuclease (SNase domain protein); KEGG: dol:Dole_2932 nuclease (SNase domain protein); nuclease 1487625 6356150 Clim_1380 Chlorobium limicola DSM 245 nuclease YP_001943419.1 1486909 D 290315 CDS YP_001943420.1 189346891 6356151 1487604..1487786 1 NC_010803.1 hypothetical protein 1487786 6356151 Clim_1381 Chlorobium limicola DSM 245 hypothetical protein YP_001943420.1 1487604 D 290315 CDS YP_001943421.1 189346892 6356152 complement(1487792..1489030) 1 NC_010803.1 KEGG: hch:HCH_04190 hypothetical protein; hypothetical protein 1489030 6356152 Clim_1382 Chlorobium limicola DSM 245 hypothetical protein YP_001943421.1 1487792 R 290315 CDS YP_001943422.1 189346893 6356153 complement(1489301..1489735) 1 NC_010803.1 KEGG: cph:Cpha266_1464 activator of HSP90 ATPase 1 family protein; activator of HSP90 ATPase 1 family protein 1489735 6356153 Clim_1383 Chlorobium limicola DSM 245 activator of HSP90 ATPase 1 family protein YP_001943422.1 1489301 R 290315 CDS YP_001943423.1 189346894 6356154 1489806..1490510 1 NC_010803.1 PFAM: protein of unknown function DUF159; KEGG: cph:Cpha266_1054 protein of unknown function DUF159; hypothetical protein 1490510 6356154 Clim_1384 Chlorobium limicola DSM 245 hypothetical protein YP_001943423.1 1489806 D 290315 CDS YP_001943424.1 189346895 6356156 complement(1490700..1491857) 1 NC_010803.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cph:Cpha266_1512 DegT/DnrJ/EryC1/StrS aminotransferase; Glutamine--scyllo-inositol transaminase 1491857 6356156 Clim_1385 Chlorobium limicola DSM 245 Glutamine--scyllo-inositol transaminase YP_001943424.1 1490700 R 290315 CDS YP_001943425.1 189346896 6356157 complement(1492113..1493243) 1 NC_010803.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: cph:Cpha266_1513 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1493243 6356157 Clim_1386 Chlorobium limicola DSM 245 iron-containing alcohol dehydrogenase YP_001943425.1 1492113 R 290315 CDS YP_001943426.1 189346897 6356158 complement(1493255..1493980) 1 NC_010803.1 PFAM: acylneuraminate cytidylyltransferase; KEGG: cte:CT1153 acylneuraminate cytidylyltransferase; acylneuraminate cytidylyltransferase 1493980 6356158 Clim_1387 Chlorobium limicola DSM 245 acylneuraminate cytidylyltransferase YP_001943426.1 1493255 R 290315 CDS YP_001943427.1 189346898 6356159 complement(1493989..1494942) 1 NC_010803.1 KEGG: cte:CT1154 hypothetical protein; hypothetical protein 1494942 6356159 Clim_1388 Chlorobium limicola DSM 245 hypothetical protein YP_001943427.1 1493989 R 290315 CDS YP_001943428.1 189346899 6356160 1495687..1496136 1 NC_010803.1 KEGG: cph:Cpha266_0798 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 1496136 6356160 Clim_1389 Chlorobium limicola DSM 245 ECF subfamily RNA polymerase sigma-24 subunit YP_001943428.1 1495687 D 290315 CDS YP_001943429.1 189346900 6356161 complement(1496301..1497539) 1 NC_010803.1 KEGG: cph:Cpha266_1516 hypothetical protein; hypothetical protein 1497539 6356161 Clim_1390 Chlorobium limicola DSM 245 hypothetical protein YP_001943429.1 1496301 R 290315 CDS YP_001943430.1 189346901 6356162 1497560..1499392 1 NC_010803.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cph:Cpha266_1519 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 1499392 6356162 Clim_1391 Chlorobium limicola DSM 245 AMP-dependent synthetase and ligase YP_001943430.1 1497560 D 290315 CDS YP_001943431.1 189346902 6356163 1499443..1499997 1 NC_010803.1 KEGG: cph:Cpha266_0655 hypothetical protein; hypothetical protein 1499997 6356163 Clim_1392 Chlorobium limicola DSM 245 hypothetical protein YP_001943431.1 1499443 D 290315 CDS YP_001943432.1 189346903 6356164 complement(1499998..1500834) 1 NC_010803.1 PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: cph:Cpha266_1520 HhH-GPD family protein; HhH-GPD family protein 1500834 6356164 Clim_1393 Chlorobium limicola DSM 245 HhH-GPD family protein YP_001943432.1 1499998 R 290315 CDS YP_001943433.1 189346904 6356165 complement(1500850..1501692) 1 NC_010803.1 PFAM: beta-lactamase domain protein; KEGG: plt:Plut_0970 metal-dependent hydrolase; beta-lactamase domain-containing protein 1501692 6356165 Clim_1394 Chlorobium limicola DSM 245 beta-lactamase domain-containing protein YP_001943433.1 1500850 R 290315 CDS YP_001943434.1 189346905 6356166 complement(1501902..1502264) 1 NC_010803.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1502264 rplS 6356166 rplS Chlorobium limicola DSM 245 50S ribosomal protein L19 YP_001943434.1 1501902 R 290315 CDS YP_001943435.1 189346906 6356167 complement(1502300..1503004) 1 NC_010803.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 1503004 trmD 6356167 trmD Chlorobium limicola DSM 245 tRNA (guanine-N(1)-)-methyltransferase YP_001943435.1 1502300 R 290315 CDS YP_001943436.1 189346907 6356168 complement(1503044..1503550) 1 NC_010803.1 TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: cph:Cpha266_1523 16S rRNA processing protein RimM; 16S rRNA processing protein RimM 1503550 6356168 Clim_1397 Chlorobium limicola DSM 245 16S rRNA processing protein RimM YP_001943436.1 1503044 R 290315 CDS YP_001943437.1 189346908 6356169 complement(1503575..1503976) 1 NC_010803.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 1503976 rpsP 6356169 rpsP Chlorobium limicola DSM 245 30S ribosomal protein S16 YP_001943437.1 1503575 R 290315 CDS YP_001943438.1 189346909 6356170 complement(1504017..1505366) 1 NC_010803.1 KEGG: cph:Cpha266_1525 signal recognition particle subunit FFH/SRP54 (SRP54); TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle protein 1505366 6356170 Clim_1399 Chlorobium limicola DSM 245 signal recognition particle protein YP_001943438.1 1504017 R 290315 CDS YP_001943439.1 189346910 6356171 1505550..1506533 1 NC_010803.1 TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein; KEGG: cph:Cpha266_1526 RfaE bifunctional protein; rfaE bifunctional protein 1506533 6356171 Clim_1400 Chlorobium limicola DSM 245 rfaE bifunctional protein YP_001943439.1 1505550 D 290315 CDS YP_001943440.1 189346911 6356172 complement(1506505..1507143) 1 NC_010803.1 KEGG: cph:Cpha266_1527 hypothetical protein; hypothetical protein 1507143 6356172 Clim_1401 Chlorobium limicola DSM 245 hypothetical protein YP_001943440.1 1506505 R 290315 CDS YP_001943441.1 189346912 6356173 complement(1507198..1507854) 1 NC_010803.1 PFAM: cyclase/dehydrase; KEGG: cph:Cpha266_1528 cyclase/dehydrase; cyclase/dehydrase 1507854 6356173 Clim_1402 Chlorobium limicola DSM 245 cyclase/dehydrase YP_001943441.1 1507198 R 290315 CDS YP_001943442.1 189346913 6356174 complement(1507907..1509574) 1 NC_010803.1 KEGG: cph:Cpha266_1529 C-terminal processing peptidase-3. Serine peptidase. MEROPS family S41A; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 1509574 6356174 Clim_1403 Chlorobium limicola DSM 245 carboxyl-terminal protease YP_001943442.1 1507907 R 290315 CDS YP_001943443.1 189346914 6356175 complement(1510440..1510925) 1 NC_010803.1 PFAM: Endoribonuclease L-PSP; KEGG: cph:Cpha266_1530 endoribonuclease L-PSP; endoribonuclease L-PSP 1510925 6356175 Clim_1404 Chlorobium limicola DSM 245 endoribonuclease L-PSP YP_001943443.1 1510440 R 290315 CDS YP_001943444.1 189346915 6356176 1511102..1511743 1 NC_010803.1 PFAM: thiamine monophosphate synthase; KEGG: cph:Cpha266_1531 thiamine monophosphate synthase; thiamine monophosphate synthase 1511743 6356176 Clim_1405 Chlorobium limicola DSM 245 thiamine monophosphate synthase YP_001943444.1 1511102 D 290315 CDS YP_001943445.1 189346916 6356177 1511740..1512372 1 NC_010803.1 KEGG: cph:Cpha266_1532 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 1512372 6356177 Clim_1406 Chlorobium limicola DSM 245 thiamine-phosphate pyrophosphorylase YP_001943445.1 1511740 D 290315 CDS YP_001943446.1 189346917 6356178 1512369..1513172 1 NC_010803.1 TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: cph:Cpha266_1533 phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase 1513172 6356178 Clim_1407 Chlorobium limicola DSM 245 phosphomethylpyrimidine kinase YP_001943446.1 1512369 D 290315 CDS YP_001943447.1 189346918 6356179 complement(1513173..1514510) 1 NC_010803.1 KEGG: pvi:Cvib_0945 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 1514510 6356179 Clim_1408 Chlorobium limicola DSM 245 nucleotide sugar dehydrogenase YP_001943447.1 1513173 R 290315 CDS YP_001943448.1 189346919 6356180 complement(1514571..1515425) 1 NC_010803.1 KEGG: cph:Cpha266_1535 hypothetical protein; hypothetical protein 1515425 6356180 Clim_1409 Chlorobium limicola DSM 245 hypothetical protein YP_001943448.1 1514571 R 290315 CDS YP_001943449.1 189346920 6356181 complement(1515407..1516111) 1 NC_010803.1 KEGG: cph:Cpha266_1536 hypothetical protein; hypothetical protein 1516111 6356181 Clim_1410 Chlorobium limicola DSM 245 hypothetical protein YP_001943449.1 1515407 R 290315 CDS YP_001943450.1 189346921 6356182 complement(1516156..1517667) 1 NC_010803.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 1517667 6356182 Clim_1411 Chlorobium limicola DSM 245 leucyl aminopeptidase YP_001943450.1 1516156 R 290315 CDS YP_001943451.1 189346922 6356183 complement(1517711..1518772) 1 NC_010803.1 PFAM: phosphoesterase RecJ domain protein; KEGG: cph:Cpha266_1538 phosphoesterase, RecJ domain protein; phosphoesterase RecJ domain-containing protein 1518772 6356183 Clim_1412 Chlorobium limicola DSM 245 phosphoesterase RecJ domain-containing protein YP_001943451.1 1517711 R 290315 CDS YP_001943452.1 189346923 6356184 complement(1518860..1519198) 1 NC_010803.1 KEGG: pvi:Cvib_0949 transcriptional regulator; transcriptional regulator 1519198 6356184 Clim_1413 Chlorobium limicola DSM 245 transcriptional regulator YP_001943452.1 1518860 R 290315 CDS YP_001943453.1 189346924 6356185 1519496..1520581 1 NC_010803.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: cph:Cpha266_1539 radical SAM enzyme, Cfr family; radical SAM enzyme, Cfr family 1520581 6356185 Clim_1414 Chlorobium limicola DSM 245 radical SAM enzyme, Cfr family YP_001943453.1 1519496 D 290315 CDS YP_001943454.1 189346925 6356186 1520603..1521382 1 NC_010803.1 KEGG: cph:Cpha266_1540 hypothetical protein; hypothetical protein 1521382 6356186 Clim_1415 Chlorobium limicola DSM 245 hypothetical protein YP_001943454.1 1520603 D 290315 CDS YP_001943455.1 189346926 6356187 1521393..1522052 1 NC_010803.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1522052 adk 6356187 adk Chlorobium limicola DSM 245 adenylate kinase YP_001943455.1 1521393 D 290315 CDS YP_001943456.1 189346927 6356188 1522078..1524510 1 NC_010803.1 KEGG: cph:Cpha266_1542 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; primosomal protein N' 1524510 6356188 Clim_1417 Chlorobium limicola DSM 245 primosomal protein N' YP_001943456.1 1522078 D 290315 CDS YP_001943457.1 189346928 6356189 1524879..1525382 1 NC_010803.1 PFAM: DoxX family protein; KEGG: cph:Cpha266_1543 DoxX family protein; DoxX family protein 1525382 6356189 Clim_1418 Chlorobium limicola DSM 245 DoxX family protein YP_001943457.1 1524879 D 290315 CDS YP_001943458.1 189346929 6356190 complement(1525388..1526551) 1 NC_010803.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: cph:Cpha266_1507 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1526551 6356190 Clim_1419 Chlorobium limicola DSM 245 RND family efflux transporter MFP subunit YP_001943458.1 1525388 R 290315 CDS YP_001943459.1 189346930 6356191 complement(1526558..1528924) 1 NC_010803.1 PFAM: protein of unknown function DUF214; KEGG: cph:Cpha266_1508 protein of unknown function DUF214; hypothetical protein 1528924 6356191 Clim_1420 Chlorobium limicola DSM 245 hypothetical protein YP_001943459.1 1526558 R 290315 CDS YP_001943460.1 189346931 6356192 complement(1528932..1529666) 1 NC_010803.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: cph:Cpha266_1509 ABC transporter; ABC transporter 1529666 6356192 Clim_1421 Chlorobium limicola DSM 245 ABC transporter YP_001943460.1 1528932 R 290315 CDS YP_001943461.1 189346932 6356193 complement(1529685..1530092) 1 NC_010803.1 KEGG: cph:Cpha266_1634 conserved hypothetical protein-signal peptide prediction; hypothetical protein 1530092 6356193 Clim_1422 Chlorobium limicola DSM 245 hypothetical protein YP_001943461.1 1529685 R 290315 CDS YP_001943462.1 189346933 6356194 1530272..1530976 1 NC_010803.1 PFAM: LmbE family protein; KEGG: sru:SRU_0866 GlcNAc-PI de-N-acetylase family; LmbE family protein 1530976 6356194 Clim_1423 Chlorobium limicola DSM 245 LmbE family protein YP_001943462.1 1530272 D 290315 CDS YP_001943463.1 189346934 6356195 1531157..1531609 1 NC_010803.1 SMART: nuclear protein SET; KEGG: cph:Cpha266_1635 nuclear protein SET; nuclear protein SET 1531609 6356195 Clim_1424 Chlorobium limicola DSM 245 nuclear protein SET YP_001943463.1 1531157 D 290315 CDS YP_001943464.1 189346935 6356196 1531767..1532174 1 NC_010803.1 KEGG: cch:Cag_1113 hypothetical protein; hypothetical protein 1532174 6356196 Clim_1425 Chlorobium limicola DSM 245 hypothetical protein YP_001943464.1 1531767 D 290315 CDS YP_001943465.1 189346936 6356197 complement(1532176..1533366) 1 NC_010803.1 PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: cph:Cpha266_1004 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1533366 6356197 Clim_1426 Chlorobium limicola DSM 245 iron-containing alcohol dehydrogenase YP_001943465.1 1532176 R 290315 CDS YP_001943466.1 189346937 6356198 complement(1533356..1533817) 1 NC_010803.1 PFAM: protein of unknown function DUF134; KEGG: cph:Cpha266_1003 protein of unknown function DUF134; hypothetical protein 1533817 6356198 Clim_1427 Chlorobium limicola DSM 245 hypothetical protein YP_001943466.1 1533356 R 290315 CDS YP_001943467.1 189346938 6356199 complement(1533840..1534820) 1 NC_010803.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: cph:Cpha266_1002 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein 1534820 6356199 Clim_1428 Chlorobium limicola DSM 245 C4-dicarboxylate transporter/malic acid transport protein YP_001943467.1 1533840 R 290315 CDS YP_001943468.1 189346939 6356200 complement(1534887..1535294) 1 NC_010803.1 PFAM: OsmC family protein; KEGG: cph:Cpha266_1001 OsmC family protein; OsmC family protein 1535294 6356200 Clim_1429 Chlorobium limicola DSM 245 OsmC family protein YP_001943468.1 1534887 R 290315 CDS YP_001943469.1 189346940 6356201 complement(1535603..1536961) 1 NC_010803.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; KEGG: cph:Cpha266_1561 HI0933 family protein; hypothetical protein 1536961 6356201 Clim_1430 Chlorobium limicola DSM 245 hypothetical protein YP_001943469.1 1535603 R 290315 CDS YP_001943470.1 189346941 6356202 complement(1536962..1538401) 1 NC_010803.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_1562 RND efflux system, outer membrane lipoprotein, NodT family; NodT family RND efflux system outer membrane lipoprotein 1538401 6356202 Clim_1431 Chlorobium limicola DSM 245 NodT family RND efflux system outer membrane lipoprotein YP_001943470.1 1536962 R 290315 CDS YP_001943471.1 189346942 6356203 complement(1538424..1541612) 1 NC_010803.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: cph:Cpha266_1563 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 1541612 6356203 Clim_1432 Chlorobium limicola DSM 245 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_001943471.1 1538424 R 290315 CDS YP_001943472.1 189346943 6356204 complement(1541680..1542801) 1 NC_010803.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein; secretion protein HlyD family protein; KEGG: cph:Cpha266_1564 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1542801 6356204 Clim_1433 Chlorobium limicola DSM 245 RND family efflux transporter MFP subunit YP_001943472.1 1541680 R 290315 CDS YP_001943473.1 189346944 6356205 complement(1542840..1543754) 1 NC_010803.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: plt:Plut_0805 AraC family transcriptional regulator; AraC family transcriptional regulator 1543754 6356205 Clim_1434 Chlorobium limicola DSM 245 AraC family transcriptional regulator YP_001943473.1 1542840 R 290315 CDS YP_001943474.1 189346945 6356206 complement(1544018..1544491) 1 NC_010803.1 KEGG: ppd:Ppro_1338 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylated-DNA--protein-cysteine methyltransferase 1544491 6356206 Clim_1435 Chlorobium limicola DSM 245 methylated-DNA--protein-cysteine methyltransferase YP_001943474.1 1544018 R 290315 CDS YP_001943475.1 189346946 6356207 complement(1544506..1545186) 1 NC_010803.1 PFAM: Protein of unknown function DUF1847; KEGG: cph:Cpha266_1986 hypothetical protein; hypothetical protein 1545186 6356207 Clim_1436 Chlorobium limicola DSM 245 hypothetical protein YP_001943475.1 1544506 R 290315 CDS YP_001943476.1 189346947 6356208 1545393..1546133 1 NC_010803.1 hypothetical protein 1546133 6356208 Clim_1437 Chlorobium limicola DSM 245 hypothetical protein YP_001943476.1 1545393 D 290315 CDS YP_001943477.1 189346948 6356209 complement(1546325..1547410) 1 NC_010803.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: cph:Cpha266_1567 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 1547410 6356209 Clim_1438 Chlorobium limicola DSM 245 NADH:flavin oxidoreductase YP_001943477.1 1546325 R 290315 CDS YP_001943478.1 189346949 6356210 1547732..1548148 1 NC_010803.1 PFAM: Secreted repeat of unknown function; KEGG: plt:Plut_0063 hypothetical protein; hypothetical protein 1548148 6356210 Clim_1439 Chlorobium limicola DSM 245 hypothetical protein YP_001943478.1 1547732 D 290315 CDS YP_001943479.1 189346950 6356211 1548234..1549256 1 NC_010803.1 PFAM: UbiA prenyltransferase; KEGG: cph:Cpha266_1569 UbiA prenyltransferase; UbiA prenyltransferase 1549256 6356211 Clim_1440 Chlorobium limicola DSM 245 UbiA prenyltransferase YP_001943479.1 1548234 D 290315 CDS YP_001943480.1 189346951 6356213 1549498..1549908 1 NC_010803.1 KEGG: cph:Cpha266_1572 hypothetical protein; hypothetical protein 1549908 6356213 Clim_1442 Chlorobium limicola DSM 245 hypothetical protein YP_001943480.1 1549498 D 290315 CDS YP_001943481.1 189346952 6354756 1549957..1550751 1 NC_010803.1 PFAM: fatty acid hydroxylase; KEGG: cph:Cpha266_1574 sterol desaturase; fatty acid hydroxylase 1550751 6354756 Clim_1443 Chlorobium limicola DSM 245 fatty acid hydroxylase YP_001943481.1 1549957 D 290315 CDS YP_001943482.1 189346953 6354757 complement(1550758..1551222) 1 NC_010803.1 SMART: Rhodanese domain protein; KEGG: cph:Cpha266_1575 rhodanese domain protein; rhodanese domain-containing protein 1551222 6354757 Clim_1444 Chlorobium limicola DSM 245 rhodanese domain-containing protein YP_001943482.1 1550758 R 290315 CDS YP_001943483.1 189346954 6354758 complement(1551224..1551868) 1 NC_010803.1 KEGG: cph:Cpha266_1576 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 1551868 6354758 Clim_1445 Chlorobium limicola DSM 245 DNA polymerase III subunit epsilon YP_001943483.1 1551224 R 290315 CDS YP_001943484.1 189346955 6354759 complement(1551961..1552824) 1 NC_010803.1 KEGG: bfs:BF2166 hypothetical protein; hypothetical protein 1552824 6354759 Clim_1446 Chlorobium limicola DSM 245 hypothetical protein YP_001943484.1 1551961 R 290315 CDS YP_001943485.1 189346956 6354760 complement(1552980..1553855) 1 NC_010803.1 metalloprotease; heat shock protein HtpX 1553855 6354760 Clim_1447 Chlorobium limicola DSM 245 heat shock protein HtpX YP_001943485.1 1552980 R 290315 CDS YP_001943486.1 189346957 6354761 complement(1554224..1555216) 1 NC_010803.1 KEGG: sma:SAV3183 hypothetical protein; hypothetical protein 1555216 6354761 Clim_1448 Chlorobium limicola DSM 245 hypothetical protein YP_001943486.1 1554224 R 290315 CDS YP_001943487.1 189346958 6354762 1555692..1556159 1 NC_010803.1 hypothetical protein 1556159 6354762 Clim_1449 Chlorobium limicola DSM 245 hypothetical protein YP_001943487.1 1555692 D 290315 CDS YP_001943488.1 189346959 6354763 complement(1556198..1556488) 1 NC_010803.1 hypothetical protein 1556488 6354763 Clim_1450 Chlorobium limicola DSM 245 hypothetical protein YP_001943488.1 1556198 R 290315 CDS YP_001943489.1 189346960 6354764 complement(1556775..1557782) 1 NC_010803.1 KEGG: cph:Cpha266_1913 hypothetical protein; hypothetical protein 1557782 6354764 Clim_1451 Chlorobium limicola DSM 245 hypothetical protein YP_001943489.1 1556775 R 290315 CDS YP_001943490.1 189346961 6354765 1558369..1558605 1 NC_010803.1 KEGG: cte:CT0924 hypothetical protein; hypothetical protein 1558605 6354765 Clim_1452 Chlorobium limicola DSM 245 hypothetical protein YP_001943490.1 1558369 D 290315 CDS YP_001943491.1 189346962 6354766 1558639..1559262 1 NC_010803.1 PFAM: methyltransferase; KEGG: cph:Cpha266_1584 methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 1559262 6354766 Clim_1453 Chlorobium limicola DSM 245 tRNA (guanine-N(7)-)-methyltransferase YP_001943491.1 1558639 D 290315 CDS YP_001943492.1 189346963 6354767 1559311..1559718 1 NC_010803.1 KEGG: aeh:Mlg_2346 ATPase (AAA+ superfamily)-like protein; ATPase (AAA+ superfamily)-like protein 1559718 6354767 Clim_1454 Chlorobium limicola DSM 245 ATPase (AAA+ superfamily)-like protein YP_001943492.1 1559311 D 290315 CDS YP_001943493.1 189346964 6354768 1559986..1560957 1 NC_010803.1 KEGG: pgi:PG1070 L-lysine 2,3-aminomutase; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; lysine 2,3-aminomutase YodO family protein 1560957 6354768 Clim_1455 Chlorobium limicola DSM 245 lysine 2,3-aminomutase YodO family protein YP_001943493.1 1559986 D 290315 CDS YP_001943494.1 189346965 6354769 1561916..1563484 1 NC_010803.1 PFAM: transposase IS4 family protein; KEGG: amt:Amet_3130 transposase, IS4 family protein; transposase IS4 family protein 1563484 6354769 Clim_1456 Chlorobium limicola DSM 245 transposase IS4 family protein YP_001943494.1 1561916 D 290315 CDS YP_001943495.1 189346966 6354770 complement(1563525..1563932) 1 NC_010803.1 PFAM: twitching mobility protein PilT; KEGG: dol:Dole_3167 twitching mobility protein PilT; twitching mobility protein PilT 1563932 6354770 Clim_1457 Chlorobium limicola DSM 245 twitching mobility protein PilT YP_001943495.1 1563525 R 290315 CDS YP_001943496.1 189346967 6354771 complement(1563929..1564153) 1 NC_010803.1 TIGRFAM: AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein; KEGG: cph:Cpha266_2120 AbrB family transcriptional regulator; AbrB family transcriptional regulator 1564153 6354771 Clim_1458 Chlorobium limicola DSM 245 AbrB family transcriptional regulator YP_001943496.1 1563929 R 290315 CDS YP_001943497.1 189346968 6354773 complement(1564580..1564831) 1 NC_010803.1 KEGG: bja:bll8207 hypothetical protein; hypothetical protein 1564831 6354773 Clim_1460 Chlorobium limicola DSM 245 hypothetical protein YP_001943497.1 1564580 R 290315 CDS YP_001943498.1 189346969 6354774 complement(1564994..1565644) 1 NC_010803.1 KEGG: aav:Aave_3356 hypothetical protein; hypothetical protein 1565644 6354774 Clim_1461 Chlorobium limicola DSM 245 hypothetical protein YP_001943498.1 1564994 R 290315 CDS YP_001943499.1 189346970 6354775 complement(1565641..1566912) 1 NC_010803.1 PFAM: SMC domain protein; KEGG: mar:MAE_39710 ATPase; SMC domain-containing protein 1566912 6354775 Clim_1462 Chlorobium limicola DSM 245 SMC domain-containing protein YP_001943499.1 1565641 R 290315 CDS YP_001943500.1 189346971 6354777 complement(1567986..1568735) 1 NC_010803.1 KEGG: cph:Cpha266_1395 hypothetical protein; hypothetical protein 1568735 6354777 Clim_1464 Chlorobium limicola DSM 245 hypothetical protein YP_001943500.1 1567986 R 290315 CDS YP_001943501.1 189346972 6354778 complement(1568806..1569375) 1 NC_010803.1 KEGG: cph:Cpha266_1396 hypothetical protein; hypothetical protein 1569375 6354778 Clim_1465 Chlorobium limicola DSM 245 hypothetical protein YP_001943501.1 1568806 R 290315 CDS YP_001943502.1 189346973 6354779 complement(1569410..1572130) 1 NC_010803.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: sfu:Sfum_2856 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 1572130 6354779 Clim_1466 Chlorobium limicola DSM 245 DNA methylase N-4/N-6 domain-containing protein YP_001943502.1 1569410 R 290315 CDS YP_001943503.1 189346974 6354780 complement(1572330..1573856) 1 NC_010803.1 KEGG: cph:Cpha266_0634 transcriptional regulator; transcriptional regulator 1573856 6354780 Clim_1467 Chlorobium limicola DSM 245 transcriptional regulator YP_001943503.1 1572330 R 290315 CDS YP_001943504.1 189346975 6354781 complement(1573849..1576926) 1 NC_010803.1 PFAM: type III restriction protein res subunit; KEGG: dau:Daud_0199 type III restriction enzyme, res subunit; type III restriction protein res subunit 1576926 6354781 Clim_1468 Chlorobium limicola DSM 245 type III restriction protein res subunit YP_001943504.1 1573849 R 290315 CDS YP_001943505.1 189346976 6354783 complement(1577373..1577792) 1 NC_010803.1 PFAM: protein of unknown function DUF86; KEGG: cph:Cpha266_0768 protein of unknown function DUF86; hypothetical protein 1577792 6354783 Clim_1470 Chlorobium limicola DSM 245 hypothetical protein YP_001943505.1 1577373 R 290315 CDS YP_001943506.1 189346977 6354784 complement(1577777..1578196) 1 NC_010803.1 PFAM: DNA polymerase beta domain protein region; KEGG: cph:Cpha266_0766 DNA polymerase, beta domain protein region; DNA polymerase beta domain-containing protein 1578196 6354784 Clim_1471 Chlorobium limicola DSM 245 DNA polymerase beta domain-containing protein YP_001943506.1 1577777 R 290315 CDS YP_001943507.1 189346978 6354785 complement(1578283..1578771) 1 NC_010803.1 KEGG: cph:Cpha266_1985 hypothetical protein; hypothetical protein 1578771 6354785 Clim_1472 Chlorobium limicola DSM 245 hypothetical protein YP_001943507.1 1578283 R 290315 CDS YP_001943508.1 189346979 6354786 1578898..1579479 1 NC_010803.1 PFAM: pentapeptide repeat protein; KEGG: cph:Cpha266_1984 pentapeptide repeat protein; pentapeptide repeat-containing protein 1579479 6354786 Clim_1473 Chlorobium limicola DSM 245 pentapeptide repeat-containing protein YP_001943508.1 1578898 D 290315 CDS YP_001943509.1 189346980 6354787 1579699..1580979 1 NC_010803.1 PFAM: HipA domain protein; KEGG: aba:Acid345_2426 HipA-like protein; HipA domain-containing protein 1580979 6354787 Clim_1474 Chlorobium limicola DSM 245 HipA domain-containing protein YP_001943509.1 1579699 D 290315 CDS YP_001943510.1 189346981 6354788 complement(1581088..1581195) 1 NC_010803.1 hypothetical protein 1581195 6354788 Clim_1475 Chlorobium limicola DSM 245 hypothetical protein YP_001943510.1 1581088 R 290315 CDS YP_001943511.1 189346982 6354789 1581786..1584782 1 NC_010803.1 PFAM: leucine-rich repeat protein; Miro domain protein; KEGG: ter:Tery_3798 small GTP-binding protein; Miro domain-containing protein 1584782 6354789 Clim_1476 Chlorobium limicola DSM 245 Miro domain-containing protein YP_001943511.1 1581786 D 290315 CDS YP_001943512.1 189346983 6354790 1584818..1585369 1 NC_010803.1 SMART: TIR protein; KEGG: amr:AM1_H0064 hypothetical protein; TIR protein 1585369 6354790 Clim_1477 Chlorobium limicola DSM 245 TIR protein YP_001943512.1 1584818 D 290315 CDS YP_001943513.1 189346984 6354792 complement(1586408..1586866) 1 NC_010803.1 KEGG: cch:Cag_1797 hypothetical protein; hypothetical protein 1586866 6354792 Clim_1479 Chlorobium limicola DSM 245 hypothetical protein YP_001943513.1 1586408 R 290315 CDS YP_001943514.1 189346985 6354793 complement(1586872..1587276) 1 NC_010803.1 PFAM: helix-turn-helix domain protein; KEGG: cch:Cag_1798 XRE family transcriptional regulator; XRE family transcriptional regulator 1587276 6354793 Clim_1480 Chlorobium limicola DSM 245 XRE family transcriptional regulator YP_001943514.1 1586872 R 290315 CDS YP_001943515.1 189346986 6354794 complement(1587279..1587764) 1 NC_010803.1 KEGG: cch:Cag_1799 hypothetical protein; hypothetical protein 1587764 6354794 Clim_1481 Chlorobium limicola DSM 245 hypothetical protein YP_001943515.1 1587279 R 290315 CDS YP_001943516.1 189346987 6354796 1588746..1589792 1 NC_010803.1 KEGG: cph:Cpha266_2139 transposase and inactivated derivatives; transposase and inactivated derivatives 1589792 6354796 Clim_1483 Chlorobium limicola DSM 245 transposase and inactivated derivatives YP_001943516.1 1588746 D 290315 CDS YP_001943517.1 189346988 6354797 1589776..1590009 1 NC_010803.1 PFAM: DNA repair protein RadC; KEGG: cph:Cpha266_1619 DNA repair protein RadC; DNA repair protein RadC 1590009 6354797 Clim_1484 Chlorobium limicola DSM 245 DNA repair protein RadC YP_001943517.1 1589776 D 290315 CDS YP_001943518.1 189346989 6354798 1590352..1591005 1 NC_010803.1 KEGG: cch:Cag_1820 hypothetical protein; hypothetical protein 1591005 6354798 Clim_1485 Chlorobium limicola DSM 245 hypothetical protein YP_001943518.1 1590352 D 290315 CDS YP_001943519.1 189346990 6354800 1591624..1592007 1 NC_010803.1 KEGG: cph:Cpha266_1622 hypothetical protein; hypothetical protein 1592007 6354800 Clim_1487 Chlorobium limicola DSM 245 hypothetical protein YP_001943519.1 1591624 D 290315 CDS YP_001943520.1 189346991 6354804 1593688..1595181 1 NC_010803.1 KEGG: cph:Cpha266_1628 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; inosine-5'-monophosphate dehydrogenase 1595181 6354804 Clim_1488 Chlorobium limicola DSM 245 inosine-5'-monophosphate dehydrogenase YP_001943520.1 1593688 D 290315 CDS YP_001943521.1 189346992 6354805 1595290..1596396 1 NC_010803.1 KEGG: cte:CT1294 hypothetical protein; hypothetical protein 1596396 6354805 Clim_1489 Chlorobium limicola DSM 245 hypothetical protein YP_001943521.1 1595290 D 290315 CDS YP_001943522.1 189346993 6354806 1596443..1597573 1 NC_010803.1 PFAM: protein of unknown function DUF1615; KEGG: cte:CT1294 hypothetical protein; hypothetical protein 1597573 6354806 Clim_1490 Chlorobium limicola DSM 245 hypothetical protein YP_001943522.1 1596443 D 290315 CDS YP_001943523.1 189346994 6354808 complement(1602120..1603976) 1 NC_010803.1 KEGG: cph:Cpha266_1630 protoporphyrin IX magnesium-chelatase; TIGRFAM: magnesium chelatase ATPase subunit D; PFAM: magnesium chelatase ChlI subunit; von Willebrand factor type A; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; magnesium chelatase ATPase subunit D 1603976 6354808 Clim_1492 Chlorobium limicola DSM 245 magnesium chelatase ATPase subunit D YP_001943523.1 1602120 R 290315 CDS YP_001943524.1 189346995 6354809 complement(1603976..1605136) 1 NC_010803.1 KEGG: cph:Cpha266_1631 protoporphyrin IX magnesium-chelatase; TIGRFAM: magnesium chelatase ATPase subunit I; SMART: AAA ATPase; magnesium chelatase ATPase subunit I 1605136 6354809 Clim_1493 Chlorobium limicola DSM 245 magnesium chelatase ATPase subunit I YP_001943524.1 1603976 R 290315 CDS YP_001943525.1 189346996 6354810 complement(1605315..1606736) 1 NC_010803.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: cph:Cpha266_1632 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 1606736 6354810 Clim_1494 Chlorobium limicola DSM 245 dihydrolipoamide dehydrogenase YP_001943525.1 1605315 R 290315 CDS YP_001943526.1 189346997 6354811 1606803..1607867 1 NC_010803.1 KEGG: plt:Plut_0783 pseudouridine synthase, RluD; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 1607867 6354811 Clim_1495 Chlorobium limicola DSM 245 RluA family pseudouridine synthase YP_001943526.1 1606803 D 290315 CDS YP_001943527.1 189346998 6354812 1608217..1609278 1 NC_010803.1 KEGG: cte:CT1305 hypothetical protein; hypothetical protein 1609278 6354812 Clim_1496 Chlorobium limicola DSM 245 hypothetical protein YP_001943527.1 1608217 D 290315 CDS YP_001943528.1 189346999 6354813 1609350..1609862 1 NC_010803.1 KEGG: cph:Cpha266_1359 hypothetical protein; hypothetical protein 1609862 6354813 Clim_1497 Chlorobium limicola DSM 245 hypothetical protein YP_001943528.1 1609350 D 290315 CDS YP_001943529.1 189347000 6354814 1610209..1612401 1 NC_010803.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: cph:Cpha266_1010 Oligopeptidase B. Serine peptidase. MEROPS family S09A; prolyl oligopeptidase 1612401 6354814 Clim_1498 Chlorobium limicola DSM 245 prolyl oligopeptidase YP_001943529.1 1610209 D 290315 CDS YP_001943530.1 189347001 6354815 complement(1612462..1613166) 1 NC_010803.1 PFAM: DNA alkylation repair enzyme; KEGG: cte:CT1302 hypothetical protein; DNA alkylation repair protein 1613166 6354815 Clim_1499 Chlorobium limicola DSM 245 DNA alkylation repair protein YP_001943530.1 1612462 R 290315 CDS YP_001943531.1 189347002 6354816 complement(1613384..1615276) 1 NC_010803.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: cph:Cpha266_1008 Fis family transcriptional regulator; ABC transporter 1615276 6354816 Clim_1500 Chlorobium limicola DSM 245 ABC transporter YP_001943531.1 1613384 R 290315 CDS YP_001943532.1 189347003 6354817 1615485..1616039 1 NC_010803.1 KEGG: pvi:Cvib_1065 hypothetical protein; hypothetical protein 1616039 6354817 Clim_1501 Chlorobium limicola DSM 245 hypothetical protein YP_001943532.1 1615485 D 290315 CDS YP_001943533.1 189347004 6354819 1616905..1617606 1 NC_010803.1 PFAM: Abortive infection protein; KEGG: plt:Plut_0757 abortive infection protein-like; abortive infection protein 1617606 6354819 Clim_1503 Chlorobium limicola DSM 245 abortive infection protein YP_001943533.1 1616905 D 290315 CDS YP_001943534.1 189347005 6354820 complement(1617644..1618738) 1 NC_010803.1 KEGG: cph:Cpha266_0714 hypothetical protein; hypothetical protein 1618738 6354820 Clim_1504 Chlorobium limicola DSM 245 hypothetical protein YP_001943534.1 1617644 R 290315 CDS YP_001943535.1 189347006 6354821 1619563..1621146 1 NC_010803.1 KEGG: cph:Cpha266_1154 hypothetical protein; hypothetical protein 1621146 6354821 Clim_1505 Chlorobium limicola DSM 245 hypothetical protein YP_001943535.1 1619563 D 290315 CDS YP_001943536.1 189347007 6354822 complement(1621221..1622279) 1 NC_010803.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: cph:Cpha266_1353 cytochrome-c peroxidase; cytochrome-c peroxidase 1622279 6354822 Clim_1506 Chlorobium limicola DSM 245 cytochrome-c peroxidase YP_001943536.1 1621221 R 290315 CDS YP_001943537.1 189347008 6354823 complement(1622325..1625105) 1 NC_010803.1 KEGG: cph:Cpha266_2350 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase 1625105 6354823 Clim_1507 Chlorobium limicola DSM 245 PAS/PAC sensor hybrid histidine kinase YP_001943537.1 1622325 R 290315 CDS YP_001943538.1 189347009 6354824 1625332..1626033 1 NC_010803.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cph:Cpha266_1636 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1626033 6354824 Clim_1508 Chlorobium limicola DSM 245 short-chain dehydrogenase/reductase SDR YP_001943538.1 1625332 D 290315 CDS YP_001943539.1 189347010 6354825 1626158..1627021 1 NC_010803.1 PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_1637 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1627021 6354825 Clim_1509 Chlorobium limicola DSM 245 alpha/beta hydrolase fold protein YP_001943539.1 1626158 D 290315 CDS YP_001943540.1 189347011 6354826 1627012..1627671 1 NC_010803.1 PFAM: thymidylate kinase; KEGG: cph:Cpha266_1638 thymidylate kinase; dTMP kinase 1627671 6354826 Clim_1510 Chlorobium limicola DSM 245 dTMP kinase YP_001943540.1 1627012 D 290315 CDS YP_001943541.1 189347012 6354827 1627811..1629073 1 NC_010803.1 KEGG: pvi:Cvib_1046 hypothetical protein; hypothetical protein 1629073 6354827 Clim_1511 Chlorobium limicola DSM 245 hypothetical protein YP_001943541.1 1627811 D 290315 CDS YP_001943542.1 189347013 6354828 1629113..1632274 1 NC_010803.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; beta-phosphoglucomutase family hydrolase; PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: cph:Cpha266_1640 beta-phosphoglucomutase family hydrolase; beta-phosphoglucomutase family hydrolase 1632274 6354828 Clim_1512 Chlorobium limicola DSM 245 beta-phosphoglucomutase family hydrolase YP_001943542.1 1629113 D 290315 CDS YP_001943543.1 189347014 6354829 1632390..1633430 1 NC_010803.1 TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: plt:Plut_1313 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; S-adenosylmethionine/tRNA-ribosyltransferase- isomerase 1633430 6354829 Clim_1513 Chlorobium limicola DSM 245 S-adenosylmethionine/tRNA-ribosyltransferase- isomerase YP_001943543.1 1632390 D 290315 CDS YP_001943544.1 189347015 6354830 1633452..1634198 1 NC_010803.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: cph:Cpha266_1642 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1634198 6354830 Clim_1514 Chlorobium limicola DSM 245 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_001943544.1 1633452 D 290315 CDS YP_001943545.1 189347016 6355772 1634468..1634914 1 NC_010803.1 PFAM: thioesterase superfamily protein; KEGG: cch:Cag_0930 phenylacetic acid degradation-related protein; thioesterase superfamily protein 1634914 6355772 Clim_1515 Chlorobium limicola DSM 245 thioesterase superfamily protein YP_001943545.1 1634468 D 290315 CDS YP_001943546.1 189347017 6355773 1635036..1636445 1 NC_010803.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cph:Cpha266_1644 radical SAM domain protein; radical SAM protein 1636445 6355773 Clim_1516 Chlorobium limicola DSM 245 radical SAM protein YP_001943546.1 1635036 D 290315 CDS YP_001943547.1 189347018 6355774 1636491..1636994 1 NC_010803.1 KEGG: plt:Plut_0061 hypothetical protein; hypothetical protein 1636994 6355774 Clim_1517 Chlorobium limicola DSM 245 hypothetical protein YP_001943547.1 1636491 D 290315 CDS YP_001943548.1 189347019 6355775 complement(1637302..1637931) 1 NC_010803.1 PFAM: Curli production assembly/transport component CsgG; KEGG: cph:Cpha266_1717 curli production assembly/transport component CsgG; curli production assembly/transport component CsgG 1637931 6355775 Clim_1518 Chlorobium limicola DSM 245 curli production assembly/transport component CsgG YP_001943548.1 1637302 R 290315 CDS YP_001943549.1 189347020 6355776 complement(1638755..1640572) 1 NC_010803.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 1640572 aspS 6355776 aspS Chlorobium limicola DSM 245 aspartyl-tRNA synthetase YP_001943549.1 1638755 R 290315 CDS YP_001943550.1 189347021 6355778 complement(1642459..1643784) 1 NC_010803.1 PFAM: ribonuclease BN; KEGG: cph:Cpha266_1653 ribonuclease BN; ribonuclease BN 1643784 6355778 Clim_1521 Chlorobium limicola DSM 245 ribonuclease BN YP_001943550.1 1642459 R 290315 CDS YP_001943551.1 189347022 6355779 complement(1643794..1645074) 1 NC_010803.1 PFAM: major facilitator superfamily MFS_1; KEGG: pvi:Cvib_0729 major facilitator superfamily MFS_1; major facilitator superfamily protein 1645074 6355779 Clim_1522 Chlorobium limicola DSM 245 major facilitator superfamily protein YP_001943551.1 1643794 R 290315 CDS YP_001943552.1 189347023 6355780 complement(1645096..1645803) 1 NC_010803.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 1645803 6355780 Clim_1523 Chlorobium limicola DSM 245 phosphoribosylformylglycinamidine synthase I YP_001943552.1 1645096 R 290315 CDS YP_001943553.1 189347024 6355781 complement(1645820..1646074) 1 NC_010803.1 TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: pvi:Cvib_0727 phosphoribosylformylglycinamidine synthase, PurS; phosphoribosylformylglycinamidine synthase PurS 1646074 6355781 Clim_1524 Chlorobium limicola DSM 245 phosphoribosylformylglycinamidine synthase PurS YP_001943553.1 1645820 R 290315 CDS YP_001943554.1 189347025 6355782 complement(1646102..1646905) 1 NC_010803.1 TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cph:Cpha266_1657 CDP-diacylglycerol--serine O-phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase 1646905 6355782 Clim_1525 Chlorobium limicola DSM 245 CDP-diacylglycerol/serine O-phosphatidyltransferase YP_001943554.1 1646102 R 290315 CDS YP_001943555.1 189347026 6355783 complement(1647102..1647935) 1 NC_010803.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 1647935 panB 6355783 panB Chlorobium limicola DSM 245 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_001943555.1 1647102 R 290315 CDS YP_001943556.1 189347027 6355784 complement(1647932..1648756) 1 NC_010803.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: plt:Plut_1329 lipoate-protein ligase A-like; biotin/lipoate A/B protein ligase 1648756 6355784 Clim_1527 Chlorobium limicola DSM 245 biotin/lipoate A/B protein ligase YP_001943556.1 1647932 R 290315 CDS YP_001943557.1 189347028 6355785 complement(1648814..1649419) 1 NC_010803.1 KEGG: cph:Cpha266_1660 hypothetical protein; hypothetical protein 1649419 6355785 Clim_1528 Chlorobium limicola DSM 245 hypothetical protein YP_001943557.1 1648814 R 290315 CDS YP_001943558.1 189347029 6354634 1649740..1650831 1 NC_010803.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 1650831 ddl 6354634 ddl Chlorobium limicola DSM 245 D-alanyl-alanine synthetase A YP_001943558.1 1649740 D 290315 CDS YP_001943559.1 189347030 6354177 1650860..1651435 1 NC_010803.1 KEGG: cte:CT1346 hypothetical protein; hypothetical protein 1651435 6354177 Clim_1530 Chlorobium limicola DSM 245 hypothetical protein YP_001943559.1 1650860 D 290315 CDS YP_001943560.1 189347031 6354178 1651542..1652960 1 NC_010803.1 PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_1665 outer membrane efflux protein; outer membrane efflux protein 1652960 6354178 Clim_1531 Chlorobium limicola DSM 245 outer membrane efflux protein YP_001943560.1 1651542 D 290315 CDS YP_001943561.1 189347032 6354179 1652988..1654235 1 NC_010803.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cph:Cpha266_1666 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1654235 6354179 Clim_1532 Chlorobium limicola DSM 245 RND family efflux transporter MFP subunit YP_001943561.1 1652988 D 290315 CDS YP_001943562.1 189347033 6354180 1654245..1654931 1 NC_010803.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: plt:Plut_1335 ATPase; ABC transporter 1654931 6354180 Clim_1533 Chlorobium limicola DSM 245 ABC transporter YP_001943562.1 1654245 D 290315 CDS YP_001943563.1 189347034 6354181 1654928..1656193 1 NC_010803.1 PFAM: protein of unknown function DUF214; KEGG: cph:Cpha266_1668 protein of unknown function DUF214; hypothetical protein 1656193 6354181 Clim_1534 Chlorobium limicola DSM 245 hypothetical protein YP_001943563.1 1654928 D 290315 CDS YP_001943564.1 189347035 6354182 1656186..1657439 1 NC_010803.1 PFAM: protein of unknown function DUF214; KEGG: cph:Cpha266_1669 protein of unknown function DUF214; hypothetical protein 1657439 6354182 Clim_1535 Chlorobium limicola DSM 245 hypothetical protein YP_001943564.1 1656186 D 290315 CDS YP_001943565.1 189347036 6354183 complement(1657472..1658416) 1 NC_010803.1 KEGG: cph:Cpha266_1670 hypothetical protein; hypothetical protein 1658416 6354183 Clim_1536 Chlorobium limicola DSM 245 hypothetical protein YP_001943565.1 1657472 R 290315 CDS YP_001943566.1 189347037 6354184 1658775..1659464 1 NC_010803.1 PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: plt:Plut_1338 OmpA family protein; OmpA/MotB domain-containing protein 1659464 6354184 Clim_1537 Chlorobium limicola DSM 245 OmpA/MotB domain-containing protein YP_001943566.1 1658775 D 290315 CDS YP_001943567.1 189347038 6354185 1659608..1660000 1 NC_010803.1 KEGG: cph:Cpha266_1672 hypothetical protein; hypothetical protein 1660000 6354185 Clim_1538 Chlorobium limicola DSM 245 hypothetical protein YP_001943567.1 1659608 D 290315 CDS YP_001943568.1 189347039 6354186 complement(1660084..1661136) 1 NC_010803.1 TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD; KEGG: cph:Cpha266_1673 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 1661136 6354186 Clim_1539 Chlorobium limicola DSM 245 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_001943568.1 1660084 R 290315 CDS YP_001943569.1 189347040 6354187 complement(1661126..1661284) 1 NC_010803.1 hypothetical protein 1661284 6354187 Clim_1540 Chlorobium limicola DSM 245 hypothetical protein YP_001943569.1 1661126 R 290315 CDS YP_001943570.1 189347041 6354188 1661309..1662292 1 NC_010803.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 1662292 6354188 Clim_1541 Chlorobium limicola DSM 245 ribose-phosphate pyrophosphokinase YP_001943570.1 1661309 D 290315 CDS YP_001943571.1 189347042 6354189 1662324..1662914 1 NC_010803.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 1662914 6354189 Clim_1542 Chlorobium limicola DSM 245 50S ribosomal protein L25/general stress protein Ctc YP_001943571.1 1662324 D 290315 CDS YP_001943572.1 189347043 6354190 1663055..1664545 1 NC_010803.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cph:Cpha266_1676 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1664545 6354190 Clim_1543 Chlorobium limicola DSM 245 binding-protein-dependent transport system inner membrane protein YP_001943572.1 1663055 D 290315 CDS YP_001943573.1 189347044 6354191 1664542..1665102 1 NC_010803.1 PFAM: NUDIX hydrolase; KEGG: cph:Cpha266_1677 NUDIX hydrolase; NUDIX hydrolase 1665102 6354191 Clim_1544 Chlorobium limicola DSM 245 NUDIX hydrolase YP_001943573.1 1664542 D 290315 CDS YP_001943574.1 189347045 6354192 1665127..1665402 1 NC_010803.1 KEGG: plt:Plut_1345 hypothetical protein; hypothetical protein 1665402 6354192 Clim_1545 Chlorobium limicola DSM 245 hypothetical protein YP_001943574.1 1665127 D 290315 CDS YP_001943575.1 189347046 6354193 1665418..1665795 1 NC_010803.1 KEGG: cph:Cpha266_0748 hypothetical protein; hypothetical protein 1665795 6354193 Clim_1546 Chlorobium limicola DSM 245 hypothetical protein YP_001943575.1 1665418 D 290315 CDS YP_001943576.1 189347047 6354194 complement(1665932..1666138) 1 NC_010803.1 hypothetical protein 1666138 6354194 Clim_1547 Chlorobium limicola DSM 245 hypothetical protein YP_001943576.1 1665932 R 290315 CDS YP_001943577.1 189347048 6354196 1668046..1668798 1 NC_010803.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: cph:Cpha266_2240 IstB domain protein ATP-binding protein; IstB domain-containing protein ATP-binding protein 1668798 6354196 Clim_1549 Chlorobium limicola DSM 245 IstB domain-containing protein ATP-binding protein YP_001943577.1 1668046 D 290315 CDS YP_001943578.1 189347049 6354197 complement(1669601..1669780) 1 NC_010803.1 hypothetical protein 1669780 6354197 Clim_1550 Chlorobium limicola DSM 245 hypothetical protein YP_001943578.1 1669601 R 290315 CDS YP_001943579.1 189347050 6354198 complement(1670024..1672228) 1 NC_010803.1 PFAM: ComEC/Rec2-related protein; KEGG: cph:Cpha266_1722 ComEC/Rec2-related protein; ComEC/Rec2-like protein 1672228 6354198 Clim_1551 Chlorobium limicola DSM 245 ComEC/Rec2-like protein YP_001943579.1 1670024 R 290315 CDS YP_001943580.1 189347051 6354199 1672341..1673213 1 NC_010803.1 KEGG: cph:Cpha266_1723 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 1673213 6354199 Clim_1552 Chlorobium limicola DSM 245 5,10-methylenetetrahydrofolate reductase YP_001943580.1 1672341 D 290315 CDS YP_001943581.1 189347052 6354200 complement(1673266..1674519) 1 NC_010803.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: cph:Cpha266_1724 diaminopimelate decarboxylase; diaminopimelate decarboxylase 1674519 6354200 Clim_1553 Chlorobium limicola DSM 245 diaminopimelate decarboxylase YP_001943581.1 1673266 R 290315 CDS YP_001943582.1 189347053 6354201 1674676..1674858 1 NC_010803.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1674858 rpmG 6354201 rpmG Chlorobium limicola DSM 245 50S ribosomal protein L33 YP_001943582.1 1674676 D 290315 CDS YP_001943583.1 189347054 6354203 1675163..1675963 1 NC_010803.1 PFAM: protein of unknown function DUF164; KEGG: plt:Plut_1350 hypothetical protein; hypothetical protein 1675963 6354203 Clim_1555 Chlorobium limicola DSM 245 hypothetical protein YP_001943583.1 1675163 D 290315 CDS YP_001943584.1 189347055 6354204 complement(1676418..1676609) 1 NC_010803.1 KEGG: cte:CT1379 hypothetical protein; hypothetical protein 1676609 6354204 Clim_1556 Chlorobium limicola DSM 245 hypothetical protein YP_001943584.1 1676418 R 290315 CDS YP_001943585.1 189347056 6354205 complement(1676659..1677486) 1 NC_010803.1 KEGG: cph:Cpha266_1728 hypothetical protein; hypothetical protein 1677486 6354205 Clim_1557 Chlorobium limicola DSM 245 hypothetical protein YP_001943585.1 1676659 R 290315 CDS YP_001943586.1 189347057 6354206 complement(1677509..1678669) 1 NC_010803.1 PFAM: aminotransferase class I and II; KEGG: cch:Cag_0798 aspartate aminotransferase; class I and II aminotransferase 1678669 6354206 Clim_1558 Chlorobium limicola DSM 245 class I and II aminotransferase YP_001943586.1 1677509 R 290315 CDS YP_001943587.1 189347058 6354207 complement(1678709..1678933) 1 NC_010803.1 KEGG: cph:Cpha266_1731 hypothetical protein; hypothetical protein 1678933 6354207 Clim_1559 Chlorobium limicola DSM 245 hypothetical protein YP_001943587.1 1678709 R 290315 CDS YP_001943588.1 189347059 6354208 complement(1678997..1679482) 1 NC_010803.1 PFAM: protein of unknown function DUF456; KEGG: plt:Plut_0433 hypothetical protein; hypothetical protein 1679482 6354208 Clim_1560 Chlorobium limicola DSM 245 hypothetical protein YP_001943588.1 1678997 R 290315 CDS YP_001943589.1 189347060 6354210 1680164..1681726 1 NC_010803.1 PFAM: transposase IS4 family protein; KEGG: amt:Amet_3130 transposase, IS4 family protein; transposase IS4 family protein 1681726 6354210 Clim_1562 Chlorobium limicola DSM 245 transposase IS4 family protein YP_001943589.1 1680164 D 290315 CDS YP_001943590.1 189347061 6354211 1682138..1682545 1 NC_010803.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: cps:CPS_3973 biopolymer transport ExbD protein; biopolymer transport protein ExbD/TolR 1682545 6354211 Clim_1563 Chlorobium limicola DSM 245 biopolymer transport protein ExbD/TolR YP_001943590.1 1682138 D 290315 CDS YP_001943591.1 189347062 6354212 1682542..1683201 1 NC_010803.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: met:M446_0507 TonB family protein; TonB family protein 1683201 6354212 Clim_1564 Chlorobium limicola DSM 245 TonB family protein YP_001943591.1 1682542 D 290315 CDS YP_001943592.1 189347063 6354213 1683466..1684191 1 NC_010803.1 PFAM: iron dependent repressor; FeoA family protein; KEGG: cte:CT1737 iron-dependent repressor; DtxR family iron (metal) dependent repressor 1684191 6354213 Clim_1565 Chlorobium limicola DSM 245 DtxR family iron (metal) dependent repressor YP_001943592.1 1683466 D 290315 CDS YP_001943593.1 189347064 6354214 1684215..1684826 1 NC_010803.1 KEGG: cph:Cpha266_0315 hypothetical protein; hypothetical protein 1684826 6354214 Clim_1566 Chlorobium limicola DSM 245 hypothetical protein YP_001943593.1 1684215 D 290315 CDS YP_001943594.1 189347065 6354215 1685499..1686491 1 NC_010803.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: tex:Teth514_0307 cobalamin (vitamin B12) biosynthesis CbiX protein; cobalamin (vitamin B12) biosynthesis CbiX protein 1686491 6354215 Clim_1567 Chlorobium limicola DSM 245 cobalamin (vitamin B12) biosynthesis CbiX protein YP_001943594.1 1685499 D 290315 CDS YP_001943595.1 189347066 6354216 1686505..1687068 1 NC_010803.1 KEGG: bth:BT_3628 hypothetical protein; hypothetical protein 1687068 6354216 Clim_1568 Chlorobium limicola DSM 245 hypothetical protein YP_001943595.1 1686505 D 290315 CDS YP_001943596.1 189347067 6354217 1687180..1688103 1 NC_010803.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: hmo:HM1_2393 sirohydrochlorin cobaltochelatase; cobalamin (vitamin B12) biosynthesis CbiX protein 1688103 6354217 Clim_1569 Chlorobium limicola DSM 245 cobalamin (vitamin B12) biosynthesis CbiX protein YP_001943596.1 1687180 D 290315 CDS YP_001943597.1 189347068 6354219 complement(1688873..1690414) 1 NC_010803.1 PFAM: transposase IS4 family protein; KEGG: cph:Cpha266_2634 transposase, IS4 family protein; transposase IS4 family protein 1690414 6354219 Clim_1571 Chlorobium limicola DSM 245 transposase IS4 family protein YP_001943597.1 1688873 R 290315 CDS YP_001943598.1 189347069 6354220 complement(1691791..1693122) 1 NC_010803.1 KEGG: dde:Dde_0446 hypothetical protein; hypothetical protein 1693122 6354220 Clim_1572 Chlorobium limicola DSM 245 hypothetical protein YP_001943598.1 1691791 R 290315 CDS YP_001943599.1 189347070 6354221 complement(1693109..1693783) 1 NC_010803.1 KEGG: dde:Dde_0446 hypothetical protein; hypothetical protein 1693783 6354221 Clim_1573 Chlorobium limicola DSM 245 hypothetical protein YP_001943599.1 1693109 R 290315 CDS YP_001943600.1 189347071 6354222 complement(1693794..1694699) 1 NC_010803.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: dde:Dde_0445 ATPase; ABC transporter 1694699 6354222 Clim_1574 Chlorobium limicola DSM 245 ABC transporter YP_001943600.1 1693794 R 290315 CDS YP_001943601.1 189347072 6354224 complement(1696893..1698260) 1 NC_010803.1 PFAM: transposase IS4 family protein; KEGG: cph:Cpha266_2634 transposase, IS4 family protein; transposase IS4 family protein 1698260 6354224 Clim_1576 Chlorobium limicola DSM 245 transposase IS4 family protein YP_001943601.1 1696893 R 290315 CDS YP_001943602.1 189347073 6354225 complement(1699037..1699468) 1 NC_010803.1 KEGG: cch:Cag_0916 C-type cytochrome; hypothetical protein 1699468 6354225 Clim_1577 Chlorobium limicola DSM 245 hypothetical protein YP_001943602.1 1699037 R 290315 CDS YP_001943603.1 189347074 6354227 complement(1701530..1701748) 1 NC_010803.1 KEGG: bay:RBAM_007330 YezD; hypothetical protein 1701748 6354227 Clim_1579 Chlorobium limicola DSM 245 hypothetical protein YP_001943603.1 1701530 R 290315 CDS YP_001943604.1 189347075 6354228 complement(1701984..1703066) 1 NC_010803.1 PFAM: ferredoxin; KEGG: cph:Cpha266_1733 ferredoxin; ferredoxin 1703066 6354228 Clim_1580 Chlorobium limicola DSM 245 ferredoxin YP_001943604.1 1701984 R 290315 CDS YP_001943605.1 189347076 6354229 complement(1703105..1703929) 1 NC_010803.1 KEGG: cph:Cpha266_1734 hypothetical protein; hypothetical protein 1703929 6354229 Clim_1581 Chlorobium limicola DSM 245 hypothetical protein YP_001943605.1 1703105 R 290315 CDS YP_001943606.1 189347077 6354230 complement(1703978..1704550) 1 NC_010803.1 KEGG: cph:Cpha266_1735 hypothetical protein; hypothetical protein 1704550 6354230 Clim_1582 Chlorobium limicola DSM 245 hypothetical protein YP_001943606.1 1703978 R 290315 CDS YP_001943607.1 189347078 6354231 complement(1704553..1704987) 1 NC_010803.1 PFAM: protein of unknown function UPF0054; KEGG: cph:Cpha266_1736 protein of unknown function UPF0054; hypothetical protein 1704987 6354231 Clim_1583 Chlorobium limicola DSM 245 hypothetical protein YP_001943607.1 1704553 R 290315 CDS YP_001943608.1 189347079 6354232 complement(1704968..1706272) 1 NC_010803.1 TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: cph:Cpha266_1737 GTP-binding protein, HSR1-related; GTP-binding proten HflX 1706272 6354232 Clim_1584 Chlorobium limicola DSM 245 GTP-binding proten HflX YP_001943608.1 1704968 R 290315 CDS YP_001943609.1 189347080 6354233 1706574..1707503 1 NC_010803.1 PFAM: Squalene/phytoene synthase; KEGG: cph:Cpha266_1738 squalene/phytoene synthase; squalene/phytoene synthase 1707503 6354233 Clim_1585 Chlorobium limicola DSM 245 squalene/phytoene synthase YP_001943609.1 1706574 D 290315 CDS YP_001943610.1 189347081 6354234 1707578..1709101 1 NC_010803.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 1709101 lysS 6354234 lysS Chlorobium limicola DSM 245 lysyl-tRNA synthetase YP_001943610.1 1707578 D 290315 CDS YP_001943611.1 189347082 6354235 1709166..1709843 1 NC_010803.1 PFAM: AAA-4 family protein; KEGG: cph:Cpha266_1740 transcriptional regulator; transcriptional regulator 1709843 6354235 Clim_1587 Chlorobium limicola DSM 245 transcriptional regulator YP_001943611.1 1709166 D 290315 CDS YP_001943612.1 189347083 6354236 complement(1709836..1710846) 1 NC_010803.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pvi:Cvib_1219 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1710846 6354236 Clim_1588 Chlorobium limicola DSM 245 NAD-dependent epimerase/dehydratase YP_001943612.1 1709836 R 290315 CDS YP_001943613.1 189347084 6354237 complement(1710964..1711518) 1 NC_010803.1 PFAM: NGN domain protein; SMART: KOW domain protein; KEGG: cch:Cag_0149 NusG antitermination factor; NusG antitermination factor 1711518 6354237 Clim_1589 Chlorobium limicola DSM 245 NusG antitermination factor YP_001943613.1 1710964 R 290315 CDS YP_001943614.1 189347085 6354238 1711807..1712148 1 NC_010803.1 PFAM: hypothetical protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: cph:Cpha266_0166 tetratricopeptide TPR_2 repeat protein; hypothetical protein 1712148 6354238 Clim_1590 Chlorobium limicola DSM 245 hypothetical protein YP_001943614.1 1711807 D 290315 CDS YP_001943615.1 189347086 6354239 1712380..1713519 1 NC_010803.1 KEGG: cph:Cpha266_1759 queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 1713519 6354239 Clim_1591 Chlorobium limicola DSM 245 queuine tRNA-ribosyltransferase YP_001943615.1 1712380 D 290315 CDS YP_001943616.1 189347087 6354240 1713522..1714811 1 NC_010803.1 KEGG: cte:CT1398 hypothetical protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein YliG 1714811 6354240 Clim_1592 Chlorobium limicola DSM 245 MiaB-like tRNA modifying protein YliG YP_001943616.1 1713522 D 290315 CDS YP_001943617.1 189347088 6354241 complement(1714824..1715750) 1 NC_010803.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: ava:Ava_3014 DNA methylase N-4/N-6; DNA methylase N-4/N-6 domain-containing protein 1715750 6354241 Clim_1593 Chlorobium limicola DSM 245 DNA methylase N-4/N-6 domain-containing protein YP_001943617.1 1714824 R 290315 CDS YP_001943618.1 189347089 6354242 complement(1715734..1716270) 1 NC_010803.1 hypothetical protein 1716270 6354242 Clim_1594 Chlorobium limicola DSM 245 hypothetical protein YP_001943618.1 1715734 R 290315 CDS YP_001943619.1 189347090 6354243 complement(1716767..1717519) 1 NC_010803.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: cph:Cpha266_2240 IstB domain protein ATP-binding protein; IstB domain-containing protein ATP-binding protein 1717519 6354243 Clim_1595 Chlorobium limicola DSM 245 IstB domain-containing protein ATP-binding protein YP_001943619.1 1716767 R 290315 CDS YP_001943620.1 189347091 6354244 complement(1717516..1719054) 1 NC_010803.1 PFAM: Integrase catalytic region; KEGG: cph:Cpha266_2241 integrase, catalytic region; integrase catalytic subunit 1719054 6354244 Clim_1596 Chlorobium limicola DSM 245 integrase catalytic subunit YP_001943620.1 1717516 R 290315 CDS YP_001943621.1 189347092 6354245 complement(1719351..1719884) 1 NC_010803.1 KEGG: gme:Gmet_1012 hemerythrin HHE cation binding region; hemerythrin HHE cation binding protein 1719884 6354245 Clim_1597 Chlorobium limicola DSM 245 hemerythrin HHE cation binding protein YP_001943621.1 1719351 R 290315 CDS YP_001943622.1 189347093 6354246 complement(1720392..1721372) 1 NC_010803.1 KEGG: cph:Cpha266_1247 PAS/PAC sensor protein; PAS/PAC sensor protein 1721372 6354246 Clim_1598 Chlorobium limicola DSM 245 PAS/PAC sensor protein YP_001943622.1 1720392 R 290315 CDS YP_001943623.1 189347094 6354248 complement(1722355..1725357) 1 NC_010803.1 KEGG: cph:Cpha266_1788 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase CheR-type; SMART: PAS domain containing protein; MCP methyltransferase/methylesterase 1725357 6354248 Clim_1600 Chlorobium limicola DSM 245 MCP methyltransferase/methylesterase YP_001943623.1 1722355 R 290315 CDS YP_001943624.1 189347095 6354249 complement(1725685..1726359) 1 NC_010803.1 PFAM: conserved hypothetical protein; KEGG: cph:Cpha266_1465 hypothetical protein; hypothetical protein 1726359 6354249 Clim_1601 Chlorobium limicola DSM 245 hypothetical protein YP_001943624.1 1725685 R 290315 CDS YP_001943625.1 189347096 6354250 complement(1726428..1729841) 1 NC_010803.1 PFAM: Patatin; KEGG: sus:Acid_5056 patatin; patatin 1729841 6354250 Clim_1602 Chlorobium limicola DSM 245 patatin YP_001943625.1 1726428 R 290315 CDS YP_001943626.1 189347097 6354251 complement(1730015..1731499) 1 NC_010803.1 PFAM: amino acid permease-associated region; KEGG: cte:CT0923 amino acid permease; amino acid permease-associated protein 1731499 6354251 Clim_1603 Chlorobium limicola DSM 245 amino acid permease-associated protein YP_001943626.1 1730015 R 290315 CDS YP_001943627.1 189347098 6354252 complement(1731624..1734293) 1 NC_010803.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: cph:Cpha266_0173 ATPase, P-type (transporting), HAD superfamily, subfamily IC; P-type HAD superfamily ATPase 1734293 6354252 Clim_1604 Chlorobium limicola DSM 245 P-type HAD superfamily ATPase YP_001943627.1 1731624 R 290315 CDS YP_001943628.1 189347099 6354253 complement(1734346..1738002) 1 NC_010803.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: cph:Cpha266_1511 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 1738002 6354253 Clim_1605 Chlorobium limicola DSM 245 FAD linked oxidase domain-containing protein YP_001943628.1 1734346 R 290315 CDS YP_001943629.1 189347100 6354254 complement(1738231..1739469) 1 NC_010803.1 KEGG: cph:Cpha266_1051 hypothetical protein; hypothetical protein 1739469 6354254 Clim_1606 Chlorobium limicola DSM 245 hypothetical protein YP_001943629.1 1738231 R 290315 CDS YP_001943630.1 189347101 6354255 complement(1739537..1739800) 1 NC_010803.1 PFAM: protein of unknown function nitrogen fixation; KEGG: pth:PTH_2367 hypothetical protein; hypothetical protein 1739800 6354255 Clim_1607 Chlorobium limicola DSM 245 hypothetical protein YP_001943630.1 1739537 R 290315 CDS YP_001943631.1 189347102 6354256 complement(1739902..1740660) 1 NC_010803.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: cte:CT0920 7-alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase SDR 1740660 6354256 Clim_1608 Chlorobium limicola DSM 245 short-chain dehydrogenase/reductase SDR YP_001943631.1 1739902 R 290315 CDS YP_001943632.1 189347103 6354257 complement(1740687..1741529) 1 NC_010803.1 PFAM: glycosyl transferase family 2; KEGG: cph:Cpha266_1049 glycosyl transferase, family 2; family 2 glycosyl transferase 1741529 6354257 Clim_1609 Chlorobium limicola DSM 245 family 2 glycosyl transferase YP_001943632.1 1740687 R 290315 CDS YP_001943633.1 189347104 6354832 complement(1741568..1742794) 1 NC_010803.1 PFAM: pentapeptide repeat protein; KEGG: cph:Cpha266_1048 pentapeptide repeat protein; pentapeptide repeat-containing protein 1742794 6354832 Clim_1610 Chlorobium limicola DSM 245 pentapeptide repeat-containing protein YP_001943633.1 1741568 R 290315 CDS YP_001943634.1 189347105 6354833 complement(1742784..1744091) 1 NC_010803.1 KEGG: cph:Cpha266_1047 hypothetical protein; hypothetical protein 1744091 6354833 Clim_1611 Chlorobium limicola DSM 245 hypothetical protein YP_001943634.1 1742784 R 290315 CDS YP_001943635.1 189347106 6354486 complement(1744097..1744489) 1 NC_010803.1 KEGG: cph:Cpha266_1046 hypothetical protein; hypothetical protein 1744489 6354486 Clim_1612 Chlorobium limicola DSM 245 hypothetical protein YP_001943635.1 1744097 R 290315 CDS YP_001943636.1 189347107 6354487 complement(1744592..1747717) 1 NC_010803.1 PFAM: acriflavin resistance protein; KEGG: cph:Cpha266_1045 acriflavin resistance protein; acriflavin resistance protein 1747717 6354487 Clim_1613 Chlorobium limicola DSM 245 acriflavin resistance protein YP_001943636.1 1744592 R 290315 CDS YP_001943637.1 189347108 6354488 complement(1747714..1748790) 1 NC_010803.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: cph:Cpha266_1044 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1748790 6354488 Clim_1614 Chlorobium limicola DSM 245 RND family efflux transporter MFP subunit YP_001943637.1 1747714 R 290315 CDS YP_001943638.1 189347109 6354489 complement(1748989..1749720) 1 NC_010803.1 KEGG: cph:Cpha266_1043 phosphate uptake regulator, PhoU; phosphate uptake regulator PhoU 1749720 6354489 Clim_1615 Chlorobium limicola DSM 245 phosphate uptake regulator PhoU YP_001943638.1 1748989 R 290315 CDS YP_001943639.1 189347110 6354490 complement(1749848..1750534) 1 NC_010803.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: pvi:Cvib_0993 phosphate uptake regulator, PhoU; phosphate uptake regulator PhoU 1750534 6354490 Clim_1616 Chlorobium limicola DSM 245 phosphate uptake regulator PhoU YP_001943639.1 1749848 R 290315 CDS YP_001943640.1 189347111 6355803 complement(1750554..1751408) 1 NC_010803.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein 1751408 6355803 Clim_1617 Chlorobium limicola DSM 245 phosphate ABC transporter ATP-binding protein YP_001943640.1 1750554 R 290315 CDS YP_001943641.1 189347112 6355804 complement(1751421..1752767) 1 NC_010803.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cph:Cpha266_1040 phosphate ABC transporter, inner membrane subunit PstA; phosphate ABC transporter permease 1752767 6355804 Clim_1618 Chlorobium limicola DSM 245 phosphate ABC transporter permease YP_001943641.1 1751421 R 290315 CDS YP_001943642.1 189347113 6355805 complement(1752814..1753980) 1 NC_010803.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: plt:Plut_1244 phosphate ABC transporter, permease protein PstC; phosphate ABC transporter permease 1753980 6355805 Clim_1619 Chlorobium limicola DSM 245 phosphate ABC transporter permease YP_001943642.1 1752814 R 290315 CDS YP_001943643.1 189347114 6355806 complement(1754187..1755005) 1 NC_010803.1 TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: cph:Cpha266_1038 phosphate binding protein; phosphate binding protein 1755005 6355806 Clim_1620 Chlorobium limicola DSM 245 phosphate binding protein YP_001943643.1 1754187 R 290315 CDS YP_001943644.1 189347115 6355807 complement(1755154..1756026) 1 NC_010803.1 TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: cph:Cpha266_1037 phosphate binding protein; phosphate binding protein 1756026 6355807 Clim_1621 Chlorobium limicola DSM 245 phosphate binding protein YP_001943644.1 1755154 R 290315 CDS YP_001943645.1 189347116 6355808 complement(1756124..1757359) 1 NC_010803.1 KEGG: cph:Cpha266_1036 hypothetical protein; hypothetical protein 1757359 6355808 Clim_1622 Chlorobium limicola DSM 245 hypothetical protein YP_001943645.1 1756124 R 290315 CDS YP_001943646.1 189347117 6355809 complement(1757487..1757747) 1 NC_010803.1 KEGG: pvi:Cvib_1000 hypothetical protein; hypothetical protein 1757747 6355809 Clim_1623 Chlorobium limicola DSM 245 hypothetical protein YP_001943646.1 1757487 R 290315 CDS YP_001943647.1 189347118 6355810 complement(1758230..1758898) 1 NC_010803.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cph:Cpha266_1034 hypothetical protein; N-acetyltransferase GCN5 1758898 6355810 Clim_1624 Chlorobium limicola DSM 245 N-acetyltransferase GCN5 YP_001943647.1 1758230 R 290315 CDS YP_001943648.1 189347119 6355811 complement(1758939..1759727) 1 NC_010803.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: pvi:Cvib_1002 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 1759727 6355811 Clim_1625 Chlorobium limicola DSM 245 phospholipid/glycerol acyltransferase YP_001943648.1 1758939 R 290315 CDS YP_001943649.1 189347120 6355812 1759909..1761366 1 NC_010803.1 KEGG: amt:Amet_0696 anion transporter; hypothetical protein 1761366 6355812 Clim_1626 Chlorobium limicola DSM 245 hypothetical protein YP_001943649.1 1759909 D 290315 CDS YP_001943650.1 189347121 6355813 complement(1761397..1762608) 1 NC_010803.1 PFAM: permease YjgP/YjgQ family protein; KEGG: cph:Cpha266_0940 permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 1762608 6355813 Clim_1627 Chlorobium limicola DSM 245 YjgP/YjgQ family permease YP_001943650.1 1761397 R 290315 CDS YP_001943651.1 189347122 6355814 complement(1762756..1762881) 1 NC_010803.1 hypothetical protein 1762881 6355814 Clim_1628 Chlorobium limicola DSM 245 hypothetical protein YP_001943651.1 1762756 R 290315 CDS YP_001943652.1 189347123 6355816 complement(1763141..1763500) 1 NC_010803.1 TIGRFAM: preprotein translocase, SecG subunit; KEGG: cph:Cpha266_0931 preprotein translocase subunit SecG; preprotein translocase subunit SecG 1763500 secG 6355816 secG Chlorobium limicola DSM 245 preprotein translocase subunit SecG YP_001943652.1 1763141 R 290315 CDS YP_001943653.1 189347124 6354940 1763588..1763830 1 NC_010803.1 KEGG: cph:Cpha266_0930 hypothetical protein; hypothetical protein 1763830 6354940 Clim_1630 Chlorobium limicola DSM 245 hypothetical protein YP_001943653.1 1763588 D 290315 CDS YP_001943654.1 189347125 6353933 1763837..1764439 1 NC_010803.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 1764439 hisB 6353933 hisB Chlorobium limicola DSM 245 imidazoleglycerol-phosphate dehydratase YP_001943654.1 1763837 D 290315 CDS YP_001943655.1 189347126 6353934 complement(1764572..1766146) 1 NC_010803.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 1766146 6353934 Clim_1632 Chlorobium limicola DSM 245 phosphodiesterase YP_001943655.1 1764572 R 290315 CDS YP_001943656.1 189347127 6353935 complement(1766457..1766723) 1 NC_010803.1 KEGG: cph:Cpha266_0927 hypothetical protein; hypothetical protein 1766723 6353935 Clim_1633 Chlorobium limicola DSM 245 hypothetical protein YP_001943656.1 1766457 R 290315 CDS YP_001943657.1 189347128 6353936 complement(1766733..1767026) 1 NC_010803.1 KEGG: cph:Cpha266_0926 hypothetical protein; hypothetical protein 1767026 6353936 Clim_1634 Chlorobium limicola DSM 245 hypothetical protein YP_001943657.1 1766733 R 290315 CDS YP_001943658.1 189347129 6353937 complement(1767040..1769454) 1 NC_010803.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1769454 pheT 6353937 pheT Chlorobium limicola DSM 245 phenylalanyl-tRNA synthetase subunit beta YP_001943658.1 1767040 R 290315 CDS YP_001943659.1 189347130 6353943 complement(1771535..1774681) 1 NC_010803.1 PFAM: acriflavin resistance protein; KEGG: plt:Plut_0709 RND family efflux transporter; acriflavin resistance protein 1774681 6353943 Clim_1637 Chlorobium limicola DSM 245 acriflavin resistance protein YP_001943659.1 1771535 R 290315 CDS YP_001943660.1 189347131 6353944 complement(1774734..1775855) 1 NC_010803.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: plt:Plut_0708 secretion protein HlyD; RND family efflux transporter MFP subunit 1775855 6353944 Clim_1638 Chlorobium limicola DSM 245 RND family efflux transporter MFP subunit YP_001943660.1 1774734 R 290315 CDS YP_001943661.1 189347132 6353945 complement(1775904..1776287) 1 NC_010803.1 PFAM: NUDIX hydrolase; KEGG: cph:Cpha266_0924 NUDIX hydrolase; NUDIX hydrolase 1776287 6353945 Clim_1639 Chlorobium limicola DSM 245 NUDIX hydrolase YP_001943661.1 1775904 R 290315 CDS YP_001943662.1 189347133 6353946 1776471..1777448 1 NC_010803.1 PFAM: Nucleotidyl transferase; KEGG: pvi:Cvib_1120 nucleotidyl transferase; nucleotidyl transferase 1777448 6353946 Clim_1640 Chlorobium limicola DSM 245 nucleotidyl transferase YP_001943662.1 1776471 D 290315 CDS YP_001943663.1 189347134 6353947 1777694..1778908 1 NC_010803.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 1778908 6353947 Clim_1641 Chlorobium limicola DSM 245 S-adenosylmethionine synthetase YP_001943663.1 1777694 D 290315 CDS YP_001943664.1 189347135 6353948 1779016..1780431 1 NC_010803.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 1780431 6353948 Clim_1642 Chlorobium limicola DSM 245 S-adenosyl-L-homocysteine hydrolase YP_001943664.1 1779016 D 290315 CDS YP_001943665.1 189347136 6353950 1780745..1781425 1 NC_010803.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: cph:Cpha266_0920 phosphoribosylanthranilate isomerase; Phosphoribosylanthranilate isomerase 1781425 6353950 Clim_1643 Chlorobium limicola DSM 245 Phosphoribosylanthranilate isomerase YP_001943665.1 1780745 D 290315 CDS YP_001943666.1 189347137 6353951 complement(1781432..1782388) 1 NC_010803.1 PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_0919 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1782388 6353951 Clim_1644 Chlorobium limicola DSM 245 alpha/beta hydrolase fold protein YP_001943666.1 1781432 R 290315 CDS YP_001943667.1 189347138 6353952 complement(1782509..1784269) 1 NC_010803.1 PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: cph:Cpha266_0917 sodium/hydrogen exchanger; sodium/hydrogen exchanger 1784269 6353952 Clim_1645 Chlorobium limicola DSM 245 sodium/hydrogen exchanger YP_001943667.1 1782509 R 290315 CDS YP_001943668.1 189347139 6353953 complement(1784439..1784936) 1 NC_010803.1 PFAM: Rubrerythrin; KEGG: cph:Cpha266_0916 rubrerythrin; rubrerythrin 1784936 6353953 Clim_1646 Chlorobium limicola DSM 245 rubrerythrin YP_001943668.1 1784439 R 290315 CDS YP_001943669.1 189347140 6353954 complement(1785066..1785866) 1 NC_010803.1 KEGG: cph:Cpha266_0915 hypothetical protein; hypothetical protein 1785866 6353954 Clim_1647 Chlorobium limicola DSM 245 hypothetical protein YP_001943669.1 1785066 R 290315 CDS YP_001943670.1 189347141 6353955 1786023..1787729 1 NC_010803.1 TIGRFAM: sulfate transporter; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: plt:Plut_0667 sulphate anion transporter; sulfate transporter 1787729 6353955 Clim_1648 Chlorobium limicola DSM 245 sulfate transporter YP_001943670.1 1786023 D 290315 CDS YP_001943671.1 189347142 6353956 complement(1787822..1788079) 1 NC_010803.1 KEGG: cph:Cpha266_0912 hypothetical protein; hypothetical protein 1788079 6353956 Clim_1649 Chlorobium limicola DSM 245 hypothetical protein YP_001943671.1 1787822 R 290315 CDS YP_001943672.1 189347143 6353957 1788228..1788680 1 NC_010803.1 TIGRFAM: nitrogenase-associated protein; PFAM: arsenate reductase and related; KEGG: cph:Cpha266_0911 nitrogenase-associated protein; nitrogenase-associated protein 1788680 6353957 Clim_1650 Chlorobium limicola DSM 245 nitrogenase-associated protein YP_001943672.1 1788228 D 290315 CDS YP_001943673.1 189347144 6353958 1788684..1788992 1 NC_010803.1 KEGG: cph:Cpha266_0910 hypothetical protein; hypothetical protein 1788992 6353958 Clim_1651 Chlorobium limicola DSM 245 hypothetical protein YP_001943673.1 1788684 D 290315 CDS YP_001943674.1 189347145 6353959 1789134..1789541 1 NC_010803.1 PFAM: TspO/MBR family protein; KEGG: plt:Plut_0665 CrtK protein; TspO and MBR-like protein 1789541 6353959 Clim_1652 Chlorobium limicola DSM 245 TspO and MBR-like protein YP_001943674.1 1789134 D 290315 CDS YP_001943675.1 189347146 6353960 1789575..1790018 1 NC_010803.1 KEGG: cte:CT0707 hypothetical protein; hypothetical protein 1790018 6353960 Clim_1653 Chlorobium limicola DSM 245 hypothetical protein YP_001943675.1 1789575 D 290315 CDS YP_001943676.1 189347147 6353961 complement(1790082..1791185) 1 NC_010803.1 KEGG: plt:Plut_0663 alanine dehydrogenase and pyridine nucleotide transhydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; alanine dehydrogenase 1791185 6353961 Clim_1654 Chlorobium limicola DSM 245 alanine dehydrogenase YP_001943676.1 1790082 R 290315 CDS YP_001943677.1 189347148 6353962 1791358..1791630 1 NC_010803.1 KEGG: cph:Cpha266_0905 hypothetical protein; hypothetical protein 1791630 6353962 Clim_1655 Chlorobium limicola DSM 245 hypothetical protein YP_001943677.1 1791358 D 290315 CDS YP_001943678.1 189347149 6353963 complement(1791702..1792631) 1 NC_010803.1 KEGG: cph:Cpha266_1839 hypothetical protein; hypothetical protein 1792631 6353963 Clim_1656 Chlorobium limicola DSM 245 hypothetical protein YP_001943678.1 1791702 R 290315 CDS YP_001943679.1 189347150 6353964 complement(1792637..1793371) 1 NC_010803.1 PFAM: protein of unknown function DUF45; KEGG: cph:Cpha266_0904 protein of unknown function DUF45; hypothetical protein 1793371 6353964 Clim_1657 Chlorobium limicola DSM 245 hypothetical protein YP_001943679.1 1792637 R 290315 CDS YP_001943680.1 189347151 6353965 complement(1793381..1794373) 1 NC_010803.1 PFAM: secretion protein HlyD family protein; KEGG: cph:Cpha266_1842 secretion protein HlyD family protein; secretion protein HlyD family protein 1794373 6353965 Clim_1658 Chlorobium limicola DSM 245 secretion protein HlyD family protein YP_001943680.1 1793381 R 290315 CDS YP_001943681.1 189347152 6353966 complement(1794370..1797411) 1 NC_010803.1 KEGG: cph:Cpha266_1843 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters; TIGRFAM: type I secretion system ATPase; PFAM: cyclic nucleotide-binding; ABC transporter transmembrane region; ABC transporter; peptidase C39 bacteriocin processing; SMART: AAA ATPase; cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter 1797411 6353966 Clim_1659 Chlorobium limicola DSM 245 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter YP_001943681.1 1794370 R 290315 CDS YP_001943682.1 189347153 6353967 complement(1797502..1798215) 1 NC_010803.1 KEGG: cph:Cpha266_1844 hypothetical protein; hypothetical protein 1798215 6353967 Clim_1660 Chlorobium limicola DSM 245 hypothetical protein YP_001943682.1 1797502 R 290315 CDS YP_001943683.1 189347154 6353969 complement(1799941..1817961) 1 NC_010803.1 PFAM: Hemolysin-type calcium-binding region; von Willebrand factor type A; KEGG: lpf:lpl0681 structural toxin protein RtxA; von Willebrand factor type A 1817961 6353969 Clim_1662 Chlorobium limicola DSM 245 von Willebrand factor type A YP_001943683.1 1799941 R 290315 CDS YP_001943684.1 189347155 6353970 complement(1818580..1821054) 1 NC_010803.1 PFAM: Hemolysin-type calcium-binding region; KEGG: ana:alr7304 similar to hlyA; hemolysin-type calcium-binding protein 1821054 6353970 Clim_1663 Chlorobium limicola DSM 245 hemolysin-type calcium-binding protein YP_001943684.1 1818580 R 290315 CDS YP_001943685.1 189347156 6353971 complement(1821416..1822816) 1 NC_010803.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_1845 type I secretion outer membrane protein, TolC family; TolC family type I secretion outer membrane protein 1822816 6353971 Clim_1664 Chlorobium limicola DSM 245 TolC family type I secretion outer membrane protein YP_001943685.1 1821416 R 290315 CDS YP_001943686.1 189347157 6353972 complement(1822862..1831339) 1 NC_010803.1 TIGRFAM: outer membrane adhesin like proteiin; PFAM: Hemolysin-type calcium-binding region; von Willebrand factor type A; KEGG: lpf:lpl0681 structural toxin protein RtxA; outer membrane adhesin-like protein 1831339 6353972 Clim_1665 Chlorobium limicola DSM 245 outer membrane adhesin-like protein YP_001943686.1 1822862 R 290315 CDS YP_001943687.1 189347158 6353973 1831904..1832335 1 NC_010803.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: cph:Cpha266_1847 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; hypothetical protein 1832335 6353973 Clim_1666 Chlorobium limicola DSM 245 hypothetical protein YP_001943687.1 1831904 D 290315 CDS YP_001943688.1 189347159 6353974 complement(1832317..1833282) 1 NC_010803.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cph:Cpha266_1848 radical SAM domain protein; radical SAM protein 1833282 6353974 Clim_1667 Chlorobium limicola DSM 245 radical SAM protein YP_001943688.1 1832317 R 290315 CDS YP_001943689.1 189347160 6353975 complement(1833288..1834634) 1 NC_010803.1 PFAM: PUCC protein; KEGG: cph:Cpha266_1849 PucC protein; PUCC protein 1834634 6353975 Clim_1668 Chlorobium limicola DSM 245 PUCC protein YP_001943689.1 1833288 R 290315 CDS YP_001943690.1 189347161 6353976 1835038..1836720 1 NC_010803.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 1836720 6353976 Clim_1669 Chlorobium limicola DSM 245 thiamine biosynthesis protein ThiC YP_001943690.1 1835038 D 290315 CDS YP_001943691.1 189347162 6353977 complement(1837052..1837807) 1 NC_010803.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 1837807 tpiA 6353977 tpiA Chlorobium limicola DSM 245 triosephosphate isomerase YP_001943691.1 1837052 R 290315 CDS YP_001943692.1 189347163 6353978 complement(1837811..1838035) 1 NC_010803.1 KEGG: cph:Cpha266_1853 hypothetical protein; hypothetical protein 1838035 6353978 Clim_1671 Chlorobium limicola DSM 245 hypothetical protein YP_001943692.1 1837811 R 290315 CDS YP_001943693.1 189347164 6353979 complement(1838221..1838700) 1 NC_010803.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 1838700 greA 6353979 greA Chlorobium limicola DSM 245 transcription elongation factor GreA YP_001943693.1 1838221 R 290315 CDS YP_001943694.1 189347165 6353980 complement(1838877..1840394) 1 NC_010803.1 KEGG: cph:Cpha266_1855 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 1840394 6353980 Clim_1673 Chlorobium limicola DSM 245 protease Do YP_001943694.1 1838877 R 290315 CDS YP_001943695.1 189347166 6353981 complement(1840421..1841911) 1 NC_010803.1 KEGG: pvi:Cvib_1279 anthranilate synthase, component I; TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; anthranilate synthase component I 1841911 6353981 Clim_1674 Chlorobium limicola DSM 245 anthranilate synthase component I YP_001943695.1 1840421 R 290315 CDS YP_001943696.1 189347167 6353982 1842025..1842447 1 NC_010803.1 KEGG: cph:Cpha266_1857 hypothetical protein; hypothetical protein 1842447 6353982 Clim_1675 Chlorobium limicola DSM 245 hypothetical protein YP_001943696.1 1842025 D 290315 CDS YP_001943697.1 189347168 6353983 complement(1842441..1843271) 1 NC_010803.1 KEGG: cph:Cpha266_1858 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I 1843271 6353983 Clim_1676 Chlorobium limicola DSM 245 signal peptidase I YP_001943697.1 1842441 R 290315 CDS YP_001943698.1 189347169 6353984 complement(1843762..1845579) 1 NC_010803.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1845579 6353984 Clim_1677 Chlorobium limicola DSM 245 GTP-binding protein LepA YP_001943698.1 1843762 R 290315 CDS YP_001943699.1 189347170 6353985 complement(1845652..1846608) 1 NC_010803.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: cph:Cpha266_1860 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 1846608 6353985 Clim_1678 Chlorobium limicola DSM 245 methionyl-tRNA formyltransferase YP_001943699.1 1845652 R 290315 CDS YP_001943700.1 189347171 6353986 complement(1846664..1847221) 1 NC_010803.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1847221 6353986 Clim_1679 Chlorobium limicola DSM 245 peptide deformylase YP_001943700.1 1846664 R 290315 CDS YP_001943701.1 189347172 6353987 1847537..1848040 1 NC_010803.1 PFAM: ferric-uptake regulator; KEGG: cph:Cpha266_0314 ferric uptake regulator, Fur family; Fur family ferric uptake regulator 1848040 6353987 Clim_1680 Chlorobium limicola DSM 245 Fur family ferric uptake regulator YP_001943701.1 1847537 D 290315 CDS YP_001943702.1 189347173 6353988 complement(1848054..1850252) 1 NC_010803.1 PFAM: sodium/hydrogen exchanger; KEGG: cph:Cpha266_1862 sodium/hydrogen exchanger; sodium/hydrogen exchanger 1850252 6353988 Clim_1681 Chlorobium limicola DSM 245 sodium/hydrogen exchanger YP_001943702.1 1848054 R 290315 CDS YP_001943703.1 189347174 6353989 1850405..1850539 1 NC_010803.1 hypothetical protein 1850539 6353989 Clim_1682 Chlorobium limicola DSM 245 hypothetical protein YP_001943703.1 1850405 D 290315 CDS YP_001943704.1 189347175 6353990 1850622..1851701 1 NC_010803.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1851701 6353990 Clim_1683 Chlorobium limicola DSM 245 gamma-glutamyl kinase YP_001943704.1 1850622 D 290315 CDS YP_001943705.1 189347176 6353991 1851740..1852996 1 NC_010803.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 1852996 proA 6353991 proA Chlorobium limicola DSM 245 gamma-glutamyl phosphate reductase YP_001943705.1 1851740 D 290315 CDS YP_001943706.1 189347177 6353992 1853000..1853713 1 NC_010803.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: cph:Cpha266_1866 ABC transporter; ABC transporter 1853713 6353992 Clim_1685 Chlorobium limicola DSM 245 ABC transporter YP_001943706.1 1853000 D 290315 CDS YP_001943707.1 189347178 6353993 1853679..1855043 1 NC_010803.1 PFAM: major facilitator superfamily MFS_1; KEGG: cph:Cpha266_1867 major facilitator superfamily MFS_1; major facilitator superfamily protein 1855043 6353993 Clim_1686 Chlorobium limicola DSM 245 major facilitator superfamily protein YP_001943707.1 1853679 D 290315 CDS YP_001943708.1 189347179 6353994 complement(1855091..1856209) 1 NC_010803.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: cph:Cpha266_1868 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 1856209 6353994 Clim_1687 Chlorobium limicola DSM 245 DegT/DnrJ/EryC1/StrS aminotransferase YP_001943708.1 1855091 R 290315 CDS YP_001943709.1 189347180 6353995 1856470..1857894 1 NC_010803.1 TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: cph:Cpha266_1869 UDP-N-acetylmuramate--L-alanine ligase; UDP-N-acetylmuramate--L-alanine ligase 1857894 6353995 Clim_1688 Chlorobium limicola DSM 245 UDP-N-acetylmuramate--L-alanine ligase YP_001943709.1 1856470 D 290315 CDS YP_001943710.1 189347181 6353996 1858016..1859020 1 NC_010803.1 KEGG: cph:Cpha266_1870 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I 1859020 6353996 Clim_1689 Chlorobium limicola DSM 245 glyceraldehyde-3-phosphate dehydrogenase, type I YP_001943710.1 1858016 D 290315 CDS YP_001943711.1 189347182 6353997 1859299..1859925 1 NC_010803.1 PFAM: Proto-chlorophyllide reductase 57 kD subunit; KEGG: cph:Cpha266_1871 Proto-chlorophyllide reductase 57 kD subunit; proto-chlorophyllide reductase 57 kD subunit 1859925 6353997 Clim_1690 Chlorobium limicola DSM 245 proto-chlorophyllide reductase 57 kD subunit YP_001943711.1 1859299 D 290315 CDS YP_001943712.1 189347183 6353998 complement(1859992..1861197) 1 NC_010803.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 1861197 6353998 Clim_1691 Chlorobium limicola DSM 245 chaperone protein DnaJ YP_001943712.1 1859992 R 290315 CDS YP_001943713.1 189347184 6353999 complement(1861262..1861891) 1 NC_010803.1 PFAM: GrpE protein; KEGG: cph:Cpha266_1873 GrpE protein; GrpE protein HSP-70 cofactor 1861891 6353999 Clim_1692 Chlorobium limicola DSM 245 GrpE protein HSP-70 cofactor YP_001943713.1 1861262 R 290315 CDS YP_001943714.1 189347185 6354000 complement(1861906..1862979) 1 NC_010803.1 TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; KEGG: cph:Cpha266_1874 heat-inducible transcription repressor HrcA; heat-inducible transcription repressor HrcA 1862979 6354000 Clim_1693 Chlorobium limicola DSM 245 heat-inducible transcription repressor HrcA YP_001943714.1 1861906 R 290315 CDS YP_001943715.1 189347186 6354001 complement(1863086..1863976) 1 NC_010803.1 TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; KEGG: cph:Cpha266_1875 modification methylase, HemK family; protein-(glutamine-N5) methyltransferase 1863976 6354001 Clim_1694 Chlorobium limicola DSM 245 protein-(glutamine-N5) methyltransferase YP_001943715.1 1863086 R 290315 CDS YP_001943716.1 189347187 6354002 1864156..1864896 1 NC_010803.1 KEGG: cph:Cpha266_1876 hypothetical protein; hypothetical protein 1864896 6354002 Clim_1695 Chlorobium limicola DSM 245 hypothetical protein YP_001943716.1 1864156 D 290315 CDS YP_001943717.1 189347188 6354003 1864949..1866394 1 NC_010803.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1866394 6354003 Clim_1696 Chlorobium limicola DSM 245 prolyl-tRNA synthetase YP_001943717.1 1864949 D 290315 CDS YP_001943718.1 189347189 6354004 complement(1866478..1867065) 1 NC_010803.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cph:Cpha266_1878 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 1867065 6354004 Clim_1697 Chlorobium limicola DSM 245 alkyl hydroperoxide reductase YP_001943718.1 1866478 R 290315 CDS YP_001943719.1 189347190 6354005 1867275..1868576 1 NC_010803.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: cph:Cpha266_1882 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease 1868576 6354005 Clim_1698 Chlorobium limicola DSM 245 xanthine/uracil/vitamin C permease YP_001943719.1 1867275 D 290315 CDS YP_001943720.1 189347191 6354006 1868589..1869449 1 NC_010803.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: plt:Plut_1495 carbon-nitrogen hydrolase family protein; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1869449 6354006 Clim_1699 Chlorobium limicola DSM 245 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001943720.1 1868589 D 290315 CDS YP_001943721.1 189347192 6354007 complement(1869454..1870320) 1 NC_010803.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1870320 6354007 Clim_1700 Chlorobium limicola DSM 245 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_001943721.1 1869454 R 290315 CDS YP_001943722.1 189347193 6354008 1870434..1871138 1 NC_010803.1 PFAM: Sporulation domain protein; KEGG: cte:CT1496 hypothetical protein; sporulation domain-containing protein 1871138 6354008 Clim_1701 Chlorobium limicola DSM 245 sporulation domain-containing protein YP_001943722.1 1870434 D 290315 CDS YP_001943723.1 189347194 6354009 1871170..1872330 1 NC_010803.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: cph:Cpha266_1886 sigma54 specific Fis family transcriptional regulator; Fis family transcriptional regulator 1872330 6354009 Clim_1702 Chlorobium limicola DSM 245 Fis family transcriptional regulator YP_001943723.1 1871170 D 290315 CDS YP_001943724.1 189347195 6354010 complement(1872366..1874003) 1 NC_010803.1 TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: cph:Cpha266_1887 apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 1874003 6354010 Clim_1703 Chlorobium limicola DSM 245 apolipoprotein N-acyltransferase YP_001943724.1 1872366 R 290315 CDS YP_001943725.1 189347196 6354011 1874215..1875315 1 NC_010803.1 PFAM: bacteriochlorophyll A protein; KEGG: cph:Cpha266_1888 bacteriochlorophyll A protein; bacteriochlorophyll A protein 1875315 6354011 Clim_1704 Chlorobium limicola DSM 245 bacteriochlorophyll A protein YP_001943725.1 1874215 D 290315 CDS YP_001943726.1 189347197 6354012 complement(1875452..1875853) 1 NC_010803.1 PFAM: regulatory protein MerR; KEGG: cch:Cag_1328 MerR family transcriptional regulator; MerR family transcriptional regulator 1875853 6354012 Clim_1705 Chlorobium limicola DSM 245 MerR family transcriptional regulator YP_001943726.1 1875452 R 290315 CDS YP_001943727.1 189347198 6354013 1876096..1877856 1 NC_010803.1 PFAM: ABC transporter transmembrane region; ABC transporter; SMART: AAA ATPase; KEGG: plt:Plut_1502 ATPase; ABC transporter 1877856 6354013 Clim_1706 Chlorobium limicola DSM 245 ABC transporter YP_001943727.1 1876096 D 290315 CDS YP_001943728.1 189347199 6353769 complement(1877842..1879041) 1 NC_010803.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 1879041 purT 6353769 purT Chlorobium limicola DSM 245 phosphoribosylglycinamide formyltransferase 2 YP_001943728.1 1877842 R 290315 CDS YP_001943729.1 189347200 6355786 complement(1879231..1880652) 1 NC_010803.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cph:Cpha266_1895 radical SAM domain protein; radical SAM protein 1880652 6355786 Clim_1708 Chlorobium limicola DSM 245 radical SAM protein YP_001943729.1 1879231 R 290315 CDS YP_001943730.1 189347201 6355787 complement(1880663..1883278) 1 NC_010803.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1883278 6355787 Clim_1709 Chlorobium limicola DSM 245 DNA mismatch repair protein MutS YP_001943730.1 1880663 R 290315 CDS YP_001943731.1 189347202 6355788 1883480..1883890 1 NC_010803.1 KEGG: cph:Cpha266_1897 hypothetical protein; hypothetical protein 1883890 6355788 Clim_1710 Chlorobium limicola DSM 245 hypothetical protein YP_001943731.1 1883480 D 290315 CDS YP_001943732.1 189347203 6355789 1883967..1884266 1 NC_010803.1 PFAM: ribosomal protein L21; KEGG: pvi:Cvib_1329 50S ribosomal protein L21; 50S ribosomal protein L21 1884266 rplU 6355789 rplU Chlorobium limicola DSM 245 50S ribosomal protein L21 YP_001943732.1 1883967 D 290315 CDS YP_001943733.1 189347204 6355790 1884308..1884562 1 NC_010803.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1884562 rpmA 6355790 rpmA Chlorobium limicola DSM 245 50S ribosomal protein L27 YP_001943733.1 1884308 D 290315 CDS YP_001943734.1 189347205 6355791 1884720..1885652 1 NC_010803.1 Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase 1885652 6355791 Clim_1713 Chlorobium limicola DSM 245 malate dehydrogenase YP_001943734.1 1884720 D 290315 CDS YP_001943735.1 189347206 6355793 complement(1886532..1887581) 1 NC_010803.1 PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: cte:CT1508 hypothetical protein; Agmatine deiminase 1887581 6355793 Clim_1715 Chlorobium limicola DSM 245 Agmatine deiminase YP_001943735.1 1886532 R 290315 CDS YP_001943736.1 189347207 6355794 complement(1887593..1888879) 1 NC_010803.1 PFAM: peptidase M48 Ste24p; KEGG: cph:Cpha266_1902 STE24 endopeptidase; Ste24 endopeptidase 1888879 6355794 Clim_1716 Chlorobium limicola DSM 245 Ste24 endopeptidase YP_001943736.1 1887593 R 290315 CDS YP_001943737.1 189347208 6355795 complement(1889002..1889877) 1 NC_010803.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: cph:Cpha266_1903 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1889877 6355795 Clim_1717 Chlorobium limicola DSM 245 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001943737.1 1889002 R 290315 CDS YP_001943738.1 189347209 6355796 complement(1889893..1890801) 1 NC_010803.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 1890801 6355796 Clim_1718 Chlorobium limicola DSM 245 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_001943738.1 1889893 R 290315 CDS YP_001943739.1 189347210 6355797 complement(1890791..1891843) 1 NC_010803.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cph:Cpha266_1905 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1891843 6355797 Clim_1719 Chlorobium limicola DSM 245 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001943739.1 1890791 R 290315 CDS YP_001943740.1 189347211 6355798 complement(1891902..1892225) 1 NC_010803.1 KEGG: cph:Cpha266_1906 hypothetical protein; hypothetical protein 1892225 6355798 Clim_1720 Chlorobium limicola DSM 245 hypothetical protein YP_001943740.1 1891902 R 290315 CDS YP_001943741.1 189347212 6355799 1892487..1893242 1 NC_010803.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 1893242 6355799 Clim_1721 Chlorobium limicola DSM 245 imidazole glycerol phosphate synthase subunit HisF YP_001943741.1 1892487 D 290315 CDS YP_001943742.1 189347213 6355800 complement(1893251..1894099) 1 NC_010803.1 PFAM: protein of unknown function zinc metallopeptidase KEGG: esi:Exig_0173 protein of unknown function zinc metallopeptidase; hypothetical protein 1894099 6355800 Clim_1722 Chlorobium limicola DSM 245 hypothetical protein YP_001943742.1 1893251 R 290315 CDS YP_001943743.1 189347214 6355801 complement(1894138..1894656) 1 NC_010803.1 PFAM: NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30; KEGG: cph:Cpha266_1910 NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30; NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 1894656 6355801 Clim_1723 Chlorobium limicola DSM 245 NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 YP_001943743.1 1894138 R 290315 CDS YP_001943744.1 189347215 6355802 1894784..1895278 1 NC_010803.1 PFAM: conserved hypothetical protein; KEGG: cph:Cpha266_1911 uncharacterized protein UPF0114; hypothetical protein 1895278 6355802 Clim_1724 Chlorobium limicola DSM 245 hypothetical protein YP_001943744.1 1894784 D 290315 CDS YP_001943745.1 189347216 6354553 complement(1895298..1896416) 1 NC_010803.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: plt:Plut_1521 magnesium and cobalt transport protein CorA; magnesium and cobalt transport protein CorA 1896416 6354553 Clim_1725 Chlorobium limicola DSM 245 magnesium and cobalt transport protein CorA YP_001943745.1 1895298 R 290315 CDS YP_001943746.1 189347217 6354554 complement(1896804..1897064) 1 NC_010803.1 KEGG: cch:Cag_1724 hypothetical protein; hypothetical protein 1897064 6354554 Clim_1726 Chlorobium limicola DSM 245 hypothetical protein YP_001943746.1 1896804 R 290315 CDS YP_001943747.1 189347218 6354555 1897441..1898922 1 NC_010803.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cph:Cpha266_0673 alpha amylase, catalytic region; alpha amylase 1898922 6354555 Clim_1727 Chlorobium limicola DSM 245 alpha amylase YP_001943747.1 1897441 D 290315 CDS YP_001943748.1 189347219 6354556 1898919..1899344 1 NC_010803.1 PFAM: protein of unknown function UPF0047; KEGG: pvi:Cvib_0499 protein of unknown function UPF0047; hypothetical protein 1899344 6354556 Clim_1728 Chlorobium limicola DSM 245 hypothetical protein YP_001943748.1 1898919 D 290315 CDS YP_001943749.1 189347220 6354557 1899430..1901361 1 NC_010803.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1901361 6354557 Clim_1729 Chlorobium limicola DSM 245 1-deoxy-D-xylulose-5-phosphate synthase YP_001943749.1 1899430 D 290315 CDS YP_001943750.1 189347221 6354558 complement(1901340..1901816) 1 NC_010803.1 PFAM: phosphatidylglycerophosphatase A; KEGG: cph:Cpha266_0670 phosphatidylglycerophosphatase; phosphatidylglycerophosphatase A 1901816 6354558 Clim_1730 Chlorobium limicola DSM 245 phosphatidylglycerophosphatase A YP_001943750.1 1901340 R 290315 CDS YP_001943751.1 189347222 6354559 complement(1901820..1902416) 1 NC_010803.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cph:Cpha266_0669 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 1902416 6354559 Clim_1731 Chlorobium limicola DSM 245 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase YP_001943751.1 1901820 R 290315 CDS YP_001943752.1 189347223 6354560 complement(1902579..1904969) 1 NC_010803.1 PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: MutS III domain protein; KEGG: cph:Cpha266_0668 Smr protein/MutS2; Smr protein/MutS2 1904969 6354560 Clim_1732 Chlorobium limicola DSM 245 Smr protein/MutS2 YP_001943752.1 1902579 R 290315 CDS YP_001943753.1 189347224 6354561 1905094..1905888 1 NC_010803.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 1905888 6354561 Clim_1733 Chlorobium limicola DSM 245 pyridoxine 5'-phosphate synthase YP_001943753.1 1905094 D 290315 CDS YP_001943754.1 189347225 6354562 1905885..1906577 1 NC_010803.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 1906577 6354562 Clim_1734 Chlorobium limicola DSM 245 deoxyribonucleotide triphosphate pyrophosphatase YP_001943754.1 1905885 D 290315 CDS YP_001943755.1 189347226 6354563 1906598..1907449 1 NC_010803.1 phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 1907449 6354563 Clim_1735 Chlorobium limicola DSM 245 undecaprenyl pyrophosphate phosphatase YP_001943755.1 1906598 D 290315 CDS YP_001943756.1 189347227 6354564 1907879..1908739 1 NC_010803.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cph:Cpha266_0664 PHP C-terminal domain protein; PHP domain-containing protein 1908739 6354564 Clim_1736 Chlorobium limicola DSM 245 PHP domain-containing protein YP_001943756.1 1907879 D 290315 CDS YP_001943757.1 189347228 6354565 1908841..1909635 1 NC_010803.1 PFAM: protein of unknown function DUF140; KEGG: pvi:Cvib_0490 protein of unknown function DUF140; hypothetical protein 1909635 6354565 Clim_1737 Chlorobium limicola DSM 245 hypothetical protein YP_001943757.1 1908841 D 290315 CDS YP_001943758.1 189347229 6354566 1909640..1910374 1 NC_010803.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: plt:Plut_0441 ATPase; ABC transporter 1910374 6354566 Clim_1738 Chlorobium limicola DSM 245 ABC transporter YP_001943758.1 1909640 D 290315 CDS YP_001943759.1 189347230 6354567 1910399..1911277 1 NC_010803.1 PFAM: Mammalian cell entry related domain protein; KEGG: cph:Cpha266_0661 mammalian cell entry related domain protein; mammalian cell entry domain-containing protein 1911277 6354567 Clim_1739 Chlorobium limicola DSM 245 mammalian cell entry domain-containing protein YP_001943759.1 1910399 D 290315 CDS YP_001943760.1 189347231 6354568 1911288..1912427 1 NC_010803.1 PFAM: beta-lactamase; KEGG: cph:Cpha266_0660 beta-lactamase; beta-lactamase 1912427 6354568 Clim_1740 Chlorobium limicola DSM 245 beta-lactamase YP_001943760.1 1911288 D 290315 CDS YP_001943761.1 189347232 6354569 1912460..1913797 1 NC_010803.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mgm:Mmc1_3600 two component, sigma54 specific, transcriptional regulator, fis family; two component sigma-54 specific Fis family transcriptional regulator 1913797 6354569 Clim_1741 Chlorobium limicola DSM 245 two component sigma-54 specific Fis family transcriptional regulator YP_001943761.1 1912460 D 290315 CDS YP_001943762.1 189347233 6354570 1914026..1915852 1 NC_010803.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mgm:Mmc1_3601 periplasmic sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 1915852 6354570 Clim_1742 Chlorobium limicola DSM 245 multi-sensor signal transduction histidine kinase YP_001943762.1 1914026 D 290315 CDS YP_001943763.1 189347234 6354571 1916086..1917756 1 NC_010803.1 KEGG: pla:Plav_1014 potassium-transporting ATPase, A subunit; TIGRFAM: potassium-transporting ATPase, A subunit; PFAM: K transporting ATPase A subunit; potassium-transporting ATPase subunit A 1917756 6354571 Clim_1743 Chlorobium limicola DSM 245 potassium-transporting ATPase subunit A YP_001943763.1 1916086 D 290315 CDS YP_001943764.1 189347235 6354572 1917761..1919878 1 NC_010803.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: dge:Dgeo_2849 potassium-translocating P-type ATPase, B subunit; K+-transporting ATPase subunit B 1919878 6354572 Clim_1744 Chlorobium limicola DSM 245 K+-transporting ATPase subunit B YP_001943764.1 1917761 D 290315 CDS YP_001943765.1 189347236 6354573 1919897..1920484 1 NC_010803.1 PFAM: K transporting ATPase KdpC subunit; KEGG: pla:Plav_1015 potassium-transporting ATPase; Potassium-transporting ATPase 1920484 6354573 Clim_1745 Chlorobium limicola DSM 245 Potassium-transporting ATPase YP_001943765.1 1919897 D 290315 CDS YP_001943766.1 189347237 6354574 1920523..1922184 1 NC_010803.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; Osmosensitive K channel His kinase sensor; KEGG: sfu:Sfum_2617 osmosensitive K+ channel His kinase sensor; osmosensitive K channel His kinase sensor 1922184 6354574 Clim_1746 Chlorobium limicola DSM 245 osmosensitive K channel His kinase sensor YP_001943766.1 1920523 D 290315 CDS YP_001943767.1 189347238 6354575 complement(1922261..1924189) 1 NC_010803.1 PFAM: amine oxidase; Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: cph:Cpha266_0659 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 1924189 6354575 Clim_1747 Chlorobium limicola DSM 245 Rieske (2Fe-2S) domain-containing protein YP_001943767.1 1922261 R 290315 CDS YP_001943768.1 189347239 6354576 1924317..1925324 1 NC_010803.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: cph:Cpha266_0658 domain of unknown function DUF1730; hypothetical protein 1925324 6354576 Clim_1748 Chlorobium limicola DSM 245 hypothetical protein YP_001943768.1 1924317 D 290315 CDS YP_001943769.1 189347240 6354577 complement(1925445..1927022) 1 NC_010803.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1927022 purH 6354577 purH Chlorobium limicola DSM 245 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_001943769.1 1925445 R 290315 CDS YP_001943770.1 189347241 6354578 complement(1927216..1927989) 1 NC_010803.1 PFAM: N-acetyltransferase; KEGG: cph:Cpha266_1973 N-acetyltransferase; N-acetyltransferase 1927989 6354578 Clim_1750 Chlorobium limicola DSM 245 N-acetyltransferase YP_001943770.1 1927216 R 290315 CDS YP_001943771.1 189347242 6354579 complement(1928042..1928464) 1 NC_010803.1 KEGG: cph:Cpha266_1695 hypothetical protein; hypothetical protein 1928464 6354579 Clim_1751 Chlorobium limicola DSM 245 hypothetical protein YP_001943771.1 1928042 R 290315 CDS YP_001943772.1 189347243 6354580 complement(1928497..1929147) 1 NC_010803.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cph:Cpha266_1144 HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase 1929147 6354580 Clim_1752 Chlorobium limicola DSM 245 HAD-superfamily hydrolase YP_001943772.1 1928497 R 290315 CDS YP_001943773.1 189347244 6354581 1929632..1930159 1 NC_010803.1 KEGG: cph:Cpha266_1559 hypothetical protein; hypothetical protein 1930159 6354581 Clim_1753 Chlorobium limicola DSM 245 hypothetical protein YP_001943773.1 1929632 D 290315 CDS YP_001943774.1 189347245 6354582 complement(1930279..1930920) 1 NC_010803.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rci:RRC139 lysine exporter (LysE family); lysine exporter protein LysE/YggA 1930920 6354582 Clim_1754 Chlorobium limicola DSM 245 lysine exporter protein LysE/YggA YP_001943774.1 1930279 R 290315 CDS YP_001943775.1 189347246 6354583 1931458..1932048 1 NC_010803.1 KEGG: cph:Cpha266_1224 hypothetical protein; hypothetical protein 1932048 6354583 Clim_1755 Chlorobium limicola DSM 245 hypothetical protein YP_001943775.1 1931458 D 290315 CDS YP_001943776.1 189347247 6354584 complement(1932393..1933070) 1 NC_010803.1 PFAM: PDZ/DHR/GLGF domain protein; KEGG: esi:Exig_2418 carboxyl-terminal protease; PDZ/DHR/GLGF domain-containing protein 1933070 6354584 Clim_1756 Chlorobium limicola DSM 245 PDZ/DHR/GLGF domain-containing protein YP_001943776.1 1932393 R 290315 CDS YP_001943777.1 189347248 6354585 complement(1933261..1933386) 1 NC_010803.1 KEGG: net:Neut_2361 transposase, mutator type; transposase, mutator type 1933386 6354585 Clim_1757 Chlorobium limicola DSM 245 transposase, mutator type YP_001943777.1 1933261 R 290315 CDS YP_001943778.1 189347249 6354587 1934286..1934579 1 NC_010803.1 PFAM: transposase IS3/IS911 family protein; KEGG: cph:Cpha266_2113 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1934579 6354587 Clim_1759 Chlorobium limicola DSM 245 transposase IS3/IS911 family protein YP_001943778.1 1934286 D 290315 CDS YP_001943779.1 189347250 6354588 1934576..1935499 1 NC_010803.1 PFAM: Integrase catalytic region; KEGG: cph:Cpha266_1954 integrase, catalytic region; integrase catalytic subunit 1935499 6354588 Clim_1760 Chlorobium limicola DSM 245 integrase catalytic subunit YP_001943779.1 1934576 D 290315 CDS YP_001943780.1 189347251 6354590 complement(1936919..1937350) 1 NC_010803.1 KEGG: spl:Spea_0729 hypothetical protein; hypothetical protein 1937350 6354590 Clim_1762 Chlorobium limicola DSM 245 hypothetical protein YP_001943780.1 1936919 R 290315 CDS YP_001943781.1 189347252 6354591 complement(1937624..1939171) 1 NC_010803.1 KEGG: bth:BT_2774 adenylate cyclase; hypothetical protein 1939171 6354591 Clim_1763 Chlorobium limicola DSM 245 hypothetical protein YP_001943781.1 1937624 R 290315 CDS YP_001943782.1 189347253 6354592 1939449..1940609 1 NC_010803.1 KEGG: plt:Plut_1921 ATPase (AAA+ superfamily)-like; ATPase (AAA+ superfamily)-like protein 1940609 6354592 Clim_1764 Chlorobium limicola DSM 245 ATPase (AAA+ superfamily)-like protein YP_001943782.1 1939449 D 290315 CDS YP_001943783.1 189347254 6354593 1940987..1941601 1 NC_010803.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: cch:Cag_0504 phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase 1941601 6354593 Clim_1765 Chlorobium limicola DSM 245 phosphoribosylglycinamide formyltransferase YP_001943783.1 1940987 D 290315 CDS YP_001943784.1 189347255 6354594 1941598..1942260 1 NC_010803.1 PFAM: Radical SAM domain protein; KEGG: cph:Cpha266_1979 radical SAM domain protein; radical SAM protein 1942260 6354594 Clim_1766 Chlorobium limicola DSM 245 radical SAM protein YP_001943784.1 1941598 D 290315 CDS YP_001943785.1 189347256 6354595 1942503..1943498 1 NC_010803.1 PFAM: glycosyl transferase family 2; KEGG: cph:Cpha266_1980 glycosyl transferase, family 2; family 2 glycosyl transferase 1943498 6354595 Clim_1767 Chlorobium limicola DSM 245 family 2 glycosyl transferase YP_001943785.1 1942503 D 290315 CDS YP_001943786.1 189347257 6354596 1943600..1944472 1 NC_010803.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 1944472 6354596 Clim_1768 Chlorobium limicola DSM 245 endonuclease IV YP_001943786.1 1943600 D 290315 CDS YP_001943787.1 189347258 6354597 complement(1944447..1945331) 1 NC_010803.1 PFAM: protein of unknown function DUF214; KEGG: cph:Cpha266_1982 cell division protein FtsX; hypothetical protein 1945331 6354597 Clim_1769 Chlorobium limicola DSM 245 hypothetical protein YP_001943787.1 1944447 R 290315 CDS YP_001943788.1 189347259 6354599 complement(1945665..1946183) 1 NC_010803.1 KEGG: cph:Cpha266_1983 hypothetical protein; hypothetical protein 1946183 6354599 Clim_1770 Chlorobium limicola DSM 245 hypothetical protein YP_001943788.1 1945665 R 290315 CDS YP_001943789.1 189347260 6354600 1946440..1947933 1 NC_010803.1 TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: cph:Cpha266_1989 amidophosphoribosyltransferase; amidophosphoribosyltransferase 1947933 6354600 Clim_1771 Chlorobium limicola DSM 245 amidophosphoribosyltransferase YP_001943789.1 1946440 D 290315 CDS YP_001943790.1 189347261 6354601 complement(1948020..1948454) 1 NC_010803.1 KEGG: plt:Plut_0424 transcriptional regulators, TraR/DksA family; TraR/DksA family transcriptional regulator 1948454 6354601 Clim_1772 Chlorobium limicola DSM 245 TraR/DksA family transcriptional regulator YP_001943790.1 1948020 R 290315 CDS YP_001943791.1 189347262 6354602 complement(1948515..1951769) 1 NC_010803.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase 1951769 ileS 6354602 ileS Chlorobium limicola DSM 245 isoleucyl-tRNA synthetase YP_001943791.1 1948515 R 290315 CDS YP_001943792.1 189347263 6354603 complement(1951928..1952143) 1 NC_010803.1 KEGG: plt:Plut_0422 hypothetical protein; hypothetical protein 1952143 6354603 Clim_1774 Chlorobium limicola DSM 245 hypothetical protein YP_001943792.1 1951928 R 290315 CDS YP_001943793.1 189347264 6354604 complement(1952282..1953736) 1 NC_010803.1 KEGG: plt:Plut_0421 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1953736 6354604 Clim_1775 Chlorobium limicola DSM 245 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_001943793.1 1952282 R 290315 CDS YP_001943794.1 189347265 6354605 complement(1953783..1954775) 1 NC_010803.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cph:Cpha266_1993 UDP-galactose 4-epimerase; UDP-glucose 4-epimerase 1954775 6354605 Clim_1776 Chlorobium limicola DSM 245 UDP-glucose 4-epimerase YP_001943794.1 1953783 R 290315 CDS YP_001943795.1 189347266 6354606 complement(1954825..1955268) 1 NC_010803.1 KEGG: cph:Cpha266_1994 hypothetical protein; hypothetical protein 1955268 6354606 Clim_1777 Chlorobium limicola DSM 245 hypothetical protein YP_001943795.1 1954825 R 290315 CDS YP_001943796.1 189347267 6354607 complement(1955563..1956612) 1 NC_010803.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cph:Cpha266_1995 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 1956612 6354607 Clim_1778 Chlorobium limicola DSM 245 dTDP-glucose 4,6-dehydratase YP_001943796.1 1955563 R 290315 CDS YP_001943797.1 189347268 6354608 complement(1956627..1957520) 1 NC_010803.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cph:Cpha266_1996 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 1957520 6354608 Clim_1779 Chlorobium limicola DSM 245 dTDP-4-dehydrorhamnose reductase YP_001943797.1 1956627 R 290315 CDS YP_001943798.1 189347269 6354609 complement(1957520..1958098) 1 NC_010803.1 KEGG: cch:Cag_0514 dTDP-4-dehydrorhamnose 3,5-epimerase related; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 1958098 6354609 Clim_1780 Chlorobium limicola DSM 245 dTDP-4-dehydrorhamnose 3,5-epimerase YP_001943798.1 1957520 R 290315 CDS YP_001943799.1 189347270 6354610 complement(1958167..1959063) 1 NC_010803.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: cph:Cpha266_1998 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 1959063 6354610 Clim_1781 Chlorobium limicola DSM 245 glucose-1-phosphate thymidylyltransferase YP_001943799.1 1958167 R 290315 CDS YP_001943800.1 189347271 6354611 complement(1959211..1960254) 1 NC_010803.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: cph:Cpha266_0725 hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE 1960254 6354611 Clim_1782 Chlorobium limicola DSM 245 hydrogenase expression/formation protein HypE YP_001943800.1 1959211 R 290315 CDS YP_001943801.1 189347272 6354612 complement(1960251..1961348) 1 NC_010803.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: cph:Cpha266_0724 hydrogenase expression/formation protein HypD; hydrogenase expression/formation protein HypD 1961348 6354612 Clim_1783 Chlorobium limicola DSM 245 hydrogenase expression/formation protein HypD YP_001943801.1 1960251 R 290315 CDS YP_001943802.1 189347273 6354613 complement(1961345..1961629) 1 NC_010803.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: cte:CT1795 hydrogenase assembly chaperone HypC/HupF; hydrogenase assembly chaperone HypC/HupF 1961629 6354613 Clim_1784 Chlorobium limicola DSM 245 hydrogenase assembly chaperone HypC/HupF YP_001943802.1 1961345 R 290315 CDS YP_001943803.1 189347274 6354614 complement(1961924..1964218) 1 NC_010803.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: cph:Cpha266_0722 (NiFe) hydrogenase maturation protein HypF; (NiFe) hydrogenase maturation protein HypF 1964218 6354614 Clim_1785 Chlorobium limicola DSM 245 (NiFe) hydrogenase maturation protein HypF YP_001943803.1 1961924 R 290315 CDS YP_001943804.1 189347275 6354615 complement(1964224..1965033) 1 NC_010803.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: cte:CT1798 hydrogenase accessory protein HypB; hydrogenase nickel incorporation protein HypB 1965033 6354615 Clim_1786 Chlorobium limicola DSM 245 hydrogenase nickel incorporation protein HypB YP_001943804.1 1964224 R 290315 CDS YP_001943805.1 189347276 6354616 complement(1965038..1965388) 1 NC_010803.1 TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; KEGG: cph:Cpha266_0720 hydrogenase expression/synthesis, HypA; hydrogenase nickel incorporation protein HypA 1965388 6354616 Clim_1787 Chlorobium limicola DSM 245 hydrogenase nickel incorporation protein HypA YP_001943805.1 1965038 R 290315 CDS YP_001943806.1 189347277 6354617 1965516..1966442 1 NC_010803.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 1966442 pyrB 6354617 pyrB Chlorobium limicola DSM 245 aspartate carbamoyltransferase catalytic subunit YP_001943806.1 1965516 D 290315 CDS YP_001943807.1 189347278 6354618 1966453..1967370 1 NC_010803.1 KEGG: cph:Cpha266_0718 hypothetical protein; hypothetical protein 1967370 6354618 Clim_1789 Chlorobium limicola DSM 245 hypothetical protein YP_001943807.1 1966453 D 290315 CDS YP_001943808.1 189347279 6354619 complement(1967444..1967950) 1 NC_010803.1 PFAM: NUDIX hydrolase; KEGG: cph:Cpha266_0717 NUDIX hydrolase; NUDIX hydrolase 1967950 6354619 Clim_1790 Chlorobium limicola DSM 245 NUDIX hydrolase YP_001943808.1 1967444 R 290315 CDS YP_001943809.1 189347280 6354620 1968133..1969383 1 NC_010803.1 PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; KEGG: cph:Cpha266_0188 coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein 1969383 6354620 Clim_1791 Chlorobium limicola DSM 245 coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein YP_001943809.1 1968133 D 290315 CDS YP_001943810.1 189347281 6354621 1969617..1970687 1 NC_010803.1 KEGG: cph:Cpha266_0714 hypothetical protein; hypothetical protein 1970687 6354621 Clim_1792 Chlorobium limicola DSM 245 hypothetical protein YP_001943810.1 1969617 D 290315 CDS YP_001943811.1 189347282 6354622 1970945..1971202 1 NC_010803.1 KEGG: plt:Plut_0487 hypothetical protein; hypothetical protein 1971202 6354622 Clim_1793 Chlorobium limicola DSM 245 hypothetical protein YP_001943811.1 1970945 D 290315 CDS YP_001943812.1 189347283 6354623 1971254..1973038 1 NC_010803.1 PFAM: Na+/solute symporter; KEGG: cte:CT1806 sodium:solute symporter family protein; Na+/solute symporter 1973038 6354623 Clim_1794 Chlorobium limicola DSM 245 Na+/solute symporter YP_001943812.1 1971254 D 290315 CDS YP_001943813.1 189347284 6354624 1973165..1975024 1 NC_010803.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1975024 uvrC 6354624 uvrC Chlorobium limicola DSM 245 excinuclease ABC subunit C YP_001943813.1 1973165 D 290315 CDS YP_001943814.1 189347285 6354625 1975133..1976530 1 NC_010803.1 PFAM: hypothetical protein; Tetratricopeptide TPR_3; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: cph:Cpha266_0709 tetratricopeptide TPR_2 repeat protein; hypothetical protein 1976530 6354625 Clim_1796 Chlorobium limicola DSM 245 hypothetical protein YP_001943814.1 1975133 D 290315 CDS YP_001943815.1 189347286 6354626 1976557..1977444 1 NC_010803.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: cph:Cpha266_0708 shikimate dehydrogenase; shikimate 5-dehydrogenase 1977444 6354626 Clim_1797 Chlorobium limicola DSM 245 shikimate 5-dehydrogenase YP_001943815.1 1976557 D 290315 CDS YP_001943816.1 189347287 6354627 1977510..1978016 1 NC_010803.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1978016 6354627 Clim_1798 Chlorobium limicola DSM 245 lipoprotein signal peptidase YP_001943816.1 1977510 D 290315 CDS YP_001943817.1 189347288 6354628 1978006..1978779 1 NC_010803.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: cph:Cpha266_0706 hydrolase, TatD family; TatD family hydrolase 1978779 6354628 Clim_1799 Chlorobium limicola DSM 245 TatD family hydrolase YP_001943817.1 1978006 D 290315 CDS YP_001943818.1 189347289 6354629 1978936..1979619 1 NC_010803.1 PFAM: hypothetical protein; KEGG: cph:Cpha266_0705 tetratricopeptide TPR_2 repeat protein; hypothetical protein 1979619 6354629 Clim_1800 Chlorobium limicola DSM 245 hypothetical protein YP_001943818.1 1978936 D 290315 CDS YP_001943819.1 189347290 6354630 1979653..1980144 1 NC_010803.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: cph:Cpha266_0704 peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 1980144 6354630 Clim_1801 Chlorobium limicola DSM 245 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001943819.1 1979653 D 290315 CDS YP_001943820.1 189347291 6354631 1980158..1980847 1 NC_010803.1 PFAM: alanine racemase domain protein; KEGG: cph:Cpha266_0703 alanine racemase domain protein; alanine racemase domain-containing protein 1980847 6354631 Clim_1802 Chlorobium limicola DSM 245 alanine racemase domain-containing protein YP_001943820.1 1980158 D 290315 CDS YP_001943821.1 189347292 6354632 1980885..1982135 1 NC_010803.1 PFAM: aminotransferase class I and II; KEGG: aba:Acid345_1458 aminotransferase, class I and II; class I and II aminotransferase 1982135 6354632 Clim_1803 Chlorobium limicola DSM 245 class I and II aminotransferase YP_001943821.1 1980885 D 290315 CDS YP_001943822.1 189347293 6354633 1982151..1982972 1 NC_010803.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase 1982972 6354633 Clim_1804 Chlorobium limicola DSM 245 purine nucleoside phosphorylase YP_001943822.1 1982151 D 290315 CDS YP_001943823.1 189347294 6355144 1982994..1984058 1 NC_010803.1 KEGG: plt:Plut_0476 initiation factor 2B alpha/beta/delta; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; translation initiation factor, aIF-2BI family 1984058 6355144 Clim_1805 Chlorobium limicola DSM 245 translation initiation factor, aIF-2BI family YP_001943823.1 1982994 D 290315 CDS YP_001943824.1 189347295 6355146 1984280..1985665 1 NC_010803.1 PFAM: cytochrome c oxidase subunit I; KEGG: cch:Cag_1356 cytochrome-cbb3 oxidase, subunit I; cytochrome c oxidase subunit I 1985665 6355146 Clim_1806 Chlorobium limicola DSM 245 cytochrome c oxidase subunit I YP_001943824.1 1984280 D 290315 CDS YP_001943825.1 189347296 6355147 1985694..1986365 1 NC_010803.1 CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 1986365 6355147 Clim_1807 Chlorobium limicola DSM 245 cbb3-type cytochrome c oxidase subunit II YP_001943825.1 1985694 D 290315 CDS YP_001943826.1 189347297 6355148 1986362..1986505 1 NC_010803.1 hypothetical protein 1986505 6355148 Clim_1808 Chlorobium limicola DSM 245 hypothetical protein YP_001943826.1 1986362 D 290315 CDS YP_001943827.1 189347298 6355149 1986572..1987033 1 NC_010803.1 PFAM: cytochrome c class I; KEGG: cch:Cag_1358 probable cb-type cytochrome c oxidase subunit III; cytochrome c class I 1987033 6355149 Clim_1809 Chlorobium limicola DSM 245 cytochrome c class I YP_001943827.1 1986572 D 290315 CDS YP_001943828.1 189347299 6355150 1987087..1988190 1 NC_010803.1 KEGG: cch:Cag_1359 polyferredoxin-like; polyferredoxin-like protein 1988190 6355150 Clim_1810 Chlorobium limicola DSM 245 polyferredoxin-like protein YP_001943828.1 1987087 D 290315 CDS YP_001943829.1 189347300 6355151 1988187..1988624 1 NC_010803.1 KEGG: cch:Cag_1367 hypothetical protein; hypothetical protein 1988624 6355151 Clim_1811 Chlorobium limicola DSM 245 hypothetical protein YP_001943829.1 1988187 D 290315 CDS YP_001943830.1 189347301 6355152 1988603..1989031 1 NC_010803.1 KEGG: cch:Cag_1368 hypothetical protein; hypothetical protein 1989031 6355152 Clim_1812 Chlorobium limicola DSM 245 hypothetical protein YP_001943830.1 1988603 D 290315 CDS YP_001943831.1 189347302 6355153 1989018..1991447 1 NC_010803.1 KEGG: cch:Cag_1369 heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein; heavy metal translocating P-type ATPase 1991447 6355153 Clim_1813 Chlorobium limicola DSM 245 heavy metal translocating P-type ATPase YP_001943831.1 1989018 D 290315 CDS YP_001943832.1 189347303 6355154 1991451..1991639 1 NC_010803.1 TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: cch:Cag_1370 cytochrome oxidase maturation protein cbb3-type; cbb3-type cytochrome oxidase maturation protein 1991639 6355154 Clim_1814 Chlorobium limicola DSM 245 cbb3-type cytochrome oxidase maturation protein YP_001943832.1 1991451 D 290315 CDS YP_001943833.1 189347304 6355155 1991636..1992322 1 NC_010803.1 KEGG: cch:Cag_1371 hypothetical protein; hypothetical protein 1992322 6355155 Clim_1815 Chlorobium limicola DSM 245 hypothetical protein YP_001943833.1 1991636 D 290315 CDS YP_001943834.1 189347305 6355156 1992499..1993854 1 NC_010803.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: cph:Cpha266_0700 cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I 1993854 6355156 Clim_1816 Chlorobium limicola DSM 245 cytochrome bd ubiquinol oxidase subunit I YP_001943834.1 1992499 D 290315 CDS YP_001943835.1 189347306 6355157 1993872..1994885 1 NC_010803.1 KEGG: cph:Cpha266_0699 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II 1994885 6355157 Clim_1817 Chlorobium limicola DSM 245 cytochrome d ubiquinol oxidase subunit II YP_001943835.1 1993872 D 290315 CDS YP_001943836.1 189347307 6355158 1995055..1995723 1 NC_010803.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 1995723 radC 6355158 radC Chlorobium limicola DSM 245 DNA repair protein RadC YP_001943836.1 1995055 D 290315 CDS YP_001943837.1 189347308 6355159 complement(1995889..1996146) 1 NC_010803.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: cph:Cpha266_1762 cold-shock DNA-binding protein family; cold-shock DNA-binding domain-containing protein 1996146 6355159 Clim_1819 Chlorobium limicola DSM 245 cold-shock DNA-binding domain-containing protein YP_001943837.1 1995889 R 290315 CDS YP_001943838.1 189347309 6355160 1996357..1997088 1 NC_010803.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cph:Cpha266_1763 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1997088 6355160 Clim_1820 Chlorobium limicola DSM 245 short-chain dehydrogenase/reductase SDR YP_001943838.1 1996357 D 290315 CDS YP_001943839.1 189347310 6355161 1997085..1997312 1 NC_010803.1 hypothetical protein 1997312 6355161 Clim_1821 Chlorobium limicola DSM 245 hypothetical protein YP_001943839.1 1997085 D 290315 CDS YP_001943840.1 189347311 6355162 1997296..1997754 1 NC_010803.1 KEGG: cch:Cag_0694 hypothetical protein; hypothetical protein 1997754 6355162 Clim_1822 Chlorobium limicola DSM 245 hypothetical protein YP_001943840.1 1997296 D 290315 CDS YP_001943841.1 189347312 6355163 1997774..1999057 1 NC_010803.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 1999057 6355163 Clim_1823 Chlorobium limicola DSM 245 seryl-tRNA synthetase YP_001943841.1 1997774 D 290315 CDS YP_001943842.1 189347313 6355164 complement(1999279..2000355) 1 NC_010803.1 KEGG: cph:Cpha266_1766 homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; homoserine O-acetyltransferase 2000355 6355164 Clim_1824 Chlorobium limicola DSM 245 homoserine O-acetyltransferase YP_001943842.1 1999279 R 290315 CDS YP_001943843.1 189347314 6355165 complement(2000361..2001653) 1 NC_010803.1 KEGG: plt:Plut_0592 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine/O-acetylserine sulfhydrylase 2001653 6355165 Clim_1825 Chlorobium limicola DSM 245 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_001943843.1 2000361 R 290315 CDS YP_001943844.1 189347315 6355166 2001981..2003336 1 NC_010803.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: cph:Cpha266_1768 sun protein; sun protein 2003336 6355166 Clim_1826 Chlorobium limicola DSM 245 sun protein YP_001943844.1 2001981 D 290315 CDS YP_001943845.1 189347316 6355167 2003333..2004253 1 NC_010803.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase; KEGG: cph:Cpha266_1769 tyrosine recombinase XerD; tyrosine recombinase XerD 2004253 6355167 Clim_1827 Chlorobium limicola DSM 245 tyrosine recombinase XerD YP_001943845.1 2003333 D 290315 CDS YP_001943846.1 189347317 6355168 complement(2004269..2004796) 1 NC_010803.1 PFAM: hypothetical protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: cph:Cpha266_1770 hypothetical protein; hypothetical protein 2004796 6355168 Clim_1828 Chlorobium limicola DSM 245 hypothetical protein YP_001943846.1 2004269 R 290315 CDS YP_001943847.1 189347318 6355170 complement(2004975..2005445) 1 NC_010803.1 KEGG: cph:Cpha266_1771 hypothetical protein; hypothetical protein 2005445 6355170 Clim_1829 Chlorobium limicola DSM 245 hypothetical protein YP_001943847.1 2004975 R 290315 CDS YP_001943848.1 189347319 6355171 complement(2005696..2007084) 1 NC_010803.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: cph:Cpha266_1772 beta-lactamase domain protein; beta-lactamase domain-containing protein 2007084 6355171 Clim_1830 Chlorobium limicola DSM 245 beta-lactamase domain-containing protein YP_001943848.1 2005696 R 290315 CDS YP_001943849.1 189347320 6355172 2007293..2009350 1 NC_010803.1 KEGG: cph:Cpha266_1834 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase 2009350 6355172 Clim_1831 Chlorobium limicola DSM 245 multi-sensor signal transduction histidine kinase YP_001943849.1 2007293 D 290315 CDS YP_001943850.1 189347321 6355173 2009347..2010978 1 NC_010803.1 KEGG: cph:Cpha266_1833 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; Stage II sporulation E family protein; PAS fold domain protein; SMART: PAS domain containing protein; protein phosphatase 2C domain protein; PAS/PAC sensor protein 2010978 6355173 Clim_1832 Chlorobium limicola DSM 245 PAS/PAC sensor protein YP_001943850.1 2009347 D 290315 CDS YP_001943851.1 189347322 6355174 2011028..2012329 1 NC_010803.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: cph:Cpha266_1832 sigma54 specific Fis family transcriptional regulator; Fis family transcriptional regulator 2012329 6355174 Clim_1833 Chlorobium limicola DSM 245 Fis family transcriptional regulator YP_001943851.1 2011028 D 290315 CDS YP_001943852.1 189347323 6355175 2012750..2014516 1 NC_010803.1 KEGG: cph:Cpha266_1831 N-acetylmannosaminyltransferase; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; WecB/TagA/CpsF family glycosyl transferase 2014516 6355175 Clim_1834 Chlorobium limicola DSM 245 WecB/TagA/CpsF family glycosyl transferase YP_001943852.1 2012750 D 290315 CDS YP_001943853.1 189347324 6355176 2014523..2015242 1 NC_010803.1 PFAM: sugar transferase; KEGG: cph:Cpha266_1830 undecaprenyl-phosphate galactose phosphotransferase; undecaprenyl-phosphate galactose phosphotransferase 2015242 6355176 Clim_1835 Chlorobium limicola DSM 245 undecaprenyl-phosphate galactose phosphotransferase YP_001943853.1 2014523 D 290315 CDS YP_001943854.1 189347325 6355177 2015258..2015611 1 NC_010803.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cph:Cpha266_1829 anti-sigma-factor antagonist; anti-sigma-factor antagonist 2015611 6355177 Clim_1836 Chlorobium limicola DSM 245 anti-sigma-factor antagonist YP_001943854.1 2015258 D 290315 CDS YP_001943855.1 189347326 6355178 2015619..2016941 1 NC_010803.1 KEGG: cph:Cpha266_1828 nucleoside-diphosphate-sugar pyrophosphorylase; nucleoside-diphosphate-sugar pyrophosphorylase 2016941 6355178 Clim_1837 Chlorobium limicola DSM 245 nucleoside-diphosphate-sugar pyrophosphorylase YP_001943855.1 2015619 D 290315 CDS YP_001943856.1 189347327 6355179 2016938..2017285 1 NC_010803.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cph:Cpha266_1827 anti-sigma-factor antagonist; anti-sigma-factor antagonist 2017285 6355179 Clim_1838 Chlorobium limicola DSM 245 anti-sigma-factor antagonist YP_001943856.1 2016938 D 290315 CDS YP_001943857.1 189347328 6355180 2017282..2017704 1 NC_010803.1 KEGG: cph:Cpha266_1826 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor, serine/threonine protein kinase 2017704 6355180 Clim_1839 Chlorobium limicola DSM 245 anti-sigma regulatory factor, serine/threonine protein kinase YP_001943857.1 2017282 D 290315 CDS YP_001943858.1 189347329 6355181 2017709..2018683 1 NC_010803.1 PFAM: glycosyl transferase family 2; KEGG: cph:Cpha266_1825 glycosyl transferase, family 2; family 2 glycosyl transferase 2018683 6355181 Clim_1840 Chlorobium limicola DSM 245 family 2 glycosyl transferase YP_001943858.1 2017709 D 290315 CDS YP_001943859.1 189347330 6355182 2018688..2019209 1 NC_010803.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: cph:Cpha266_1824 serine O-acetyltransferase; transferase 2019209 6355182 Clim_1841 Chlorobium limicola DSM 245 transferase YP_001943859.1 2018688 D 290315 CDS YP_001943860.1 189347331 6355183 2019415..2020554 1 NC_010803.1 PFAM: polysaccharide export protein; KEGG: cph:Cpha266_1823 polysaccharide export protein; polysaccharide export protein 2020554 6355183 Clim_1842 Chlorobium limicola DSM 245 polysaccharide export protein YP_001943860.1 2019415 D 290315 CDS YP_001943861.1 189347332 6355184 2020551..2022326 1 NC_010803.1 PFAM: polysaccharide biosynthesis protein; KEGG: cph:Cpha266_1820 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 2022326 6355184 Clim_1843 Chlorobium limicola DSM 245 polysaccharide biosynthesis protein YP_001943861.1 2020551 D 290315 CDS YP_001943862.1 189347333 6355185 2022323..2024644 1 NC_010803.1 KEGG: cph:Cpha266_1819 uncharacterized protein involved in exopolysaccharide biosynthesis-like; hypothetical protein 2024644 6355185 Clim_1844 Chlorobium limicola DSM 245 hypothetical protein YP_001943862.1 2022323 D 290315 CDS YP_001943863.1 189347334 6355186 2024713..2025207 1 NC_010803.1 KEGG: plt:Plut_1371 serine acetyltransferase-like; serine acetyltransferase-like protein 2025207 6355186 Clim_1845 Chlorobium limicola DSM 245 serine acetyltransferase-like protein YP_001943863.1 2024713 D 290315 CDS YP_001943864.1 189347335 6355187 2025204..2026451 1 NC_010803.1 PFAM: glycosyl transferase group 1; KEGG: plt:Plut_1372 glycosyltransferase-like; group 1 glycosyl transferase 2026451 6355187 Clim_1846 Chlorobium limicola DSM 245 group 1 glycosyl transferase YP_001943864.1 2025204 D 290315 CDS YP_001943865.1 189347336 6355188 2026444..2027892 1 NC_010803.1 KEGG: cph:Cpha266_1816 hypothetical protein; hypothetical protein 2027892 6355188 Clim_1847 Chlorobium limicola DSM 245 hypothetical protein YP_001943865.1 2026444 D 290315 CDS YP_001943866.1 189347337 6355189 2027929..2028351 1 NC_010803.1 KEGG: cph:Cpha266_1815 hypothetical protein; hypothetical protein 2028351 6355189 Clim_1848 Chlorobium limicola DSM 245 hypothetical protein YP_001943866.1 2027929 D 290315 CDS YP_001943867.1 189347338 6355190 2028387..2029430 1 NC_010803.1 KEGG: cph:Cpha266_0890 hypothetical protein; hypothetical protein 2029430 6355190 Clim_1849 Chlorobium limicola DSM 245 hypothetical protein YP_001943867.1 2028387 D 290315 CDS YP_001943868.1 189347339 6355191 2029939..2031027 1 NC_010803.1 PFAM: glycosyl transferase family 2; KEGG: cph:Cpha266_1813 glycosyl transferase, family 2; family 2 glycosyl transferase 2031027 6355191 Clim_1850 Chlorobium limicola DSM 245 family 2 glycosyl transferase YP_001943868.1 2029939 D 290315 CDS YP_001943869.1 189347340 6355192 2031024..2032244 1 NC_010803.1 PFAM: glycosyl transferase group 1; KEGG: cph:Cpha266_1812 glycosyl transferase, group 1; group 1 glycosyl transferase 2032244 6355192 Clim_1851 Chlorobium limicola DSM 245 group 1 glycosyl transferase YP_001943869.1 2031024 D 290315 CDS YP_001943870.1 189347341 6355193 2032241..2033434 1 NC_010803.1 PFAM: glycosyl transferase family 2; KEGG: cph:Cpha266_1811 glycosyl transferase, family 2; family 2 glycosyl transferase 2033434 6355193 Clim_1852 Chlorobium limicola DSM 245 family 2 glycosyl transferase YP_001943870.1 2032241 D 290315 CDS YP_001943871.1 189347342 6355194 2033439..2034032 1 NC_010803.1 KEGG: plt:Plut_1385 hypothetical protein; hypothetical protein 2034032 6355194 Clim_1853 Chlorobium limicola DSM 245 hypothetical protein YP_001943871.1 2033439 D 290315 CDS YP_001943872.1 189347343 6355195 complement(2034417..2036249) 1 NC_010803.1 PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: cph:Cpha266_1774 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 2036249 6355195 Clim_1854 Chlorobium limicola DSM 245 DEAD/DEAH box helicase YP_001943872.1 2034417 R 290315 CDS YP_001943873.1 189347344 6355196 complement(2036448..2038451) 1 NC_010803.1 PFAM: hypothetical protein; Tetratricopeptide TPR_4; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: cph:Cpha266_1566 tetratricopeptide TPR_2 repeat protein; hypothetical protein 2038451 6355196 Clim_1855 Chlorobium limicola DSM 245 hypothetical protein YP_001943873.1 2036448 R 290315 CDS YP_001943874.1 189347345 6355197 complement(2038751..2039551) 1 NC_010803.1 PFAM: Integral membrane protein TerC; KEGG: cph:Cpha266_1776 integral membrane protein TerC; integral membrane protein TerC 2039551 6355197 Clim_1856 Chlorobium limicola DSM 245 integral membrane protein TerC YP_001943874.1 2038751 R 290315 CDS YP_001943875.1 189347346 6355198 complement(2039559..2041472) 1 NC_010803.1 PFAM: K potassium transporter; KEGG: cph:Cpha266_1777 K+ potassium transporter; K potassium transporter 2041472 6355198 Clim_1857 Chlorobium limicola DSM 245 K potassium transporter YP_001943875.1 2039559 R 290315 CDS YP_001943876.1 189347347 6355199 2041759..2042394 1 NC_010803.1 KEGG: ptr:743163 similar to ENSANGP00000001657; hypothetical protein 2042394 6355199 Clim_1858 Chlorobium limicola DSM 245 hypothetical protein YP_001943876.1 2041759 D 290315 CDS YP_001943877.1 189347348 6355200 2042769..2043239 1 NC_010803.1 KEGG: cph:Cpha266_0597 hypothetical protein; hypothetical protein 2043239 6355200 Clim_1859 Chlorobium limicola DSM 245 hypothetical protein YP_001943877.1 2042769 D 290315 CDS YP_001943878.1 189347349 6355201 2043355..2043849 1 NC_010803.1 PFAM: Ferritin Dps family protein; KEGG: cph:Cpha266_0596 ferritin, Dps family protein; ferritin Dps family protein 2043849 6355201 Clim_1860 Chlorobium limicola DSM 245 ferritin Dps family protein YP_001943878.1 2043355 D 290315 CDS YP_001943879.1 189347350 6355202 complement(2043961..2044827) 1 NC_010803.1 PFAM: metallophosphoesterase; KEGG: plt:Plut_1594 hypothetical protein; metallophosphoesterase 2044827 6355202 Clim_1861 Chlorobium limicola DSM 245 metallophosphoesterase YP_001943879.1 2043961 R 290315 CDS YP_001943880.1 189347351 6355204 2047125..2048084 1 NC_010803.1 TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; KEGG: cch:Cag_1783 dihydroorotate dehydrogenase 1; dihydroorotate dehydrogenase family protein 2048084 6355204 Clim_1863 Chlorobium limicola DSM 245 dihydroorotate dehydrogenase family protein YP_001943880.1 2047125 D 290315 CDS YP_001943881.1 189347352 6355205 complement(2048141..2048512) 1 NC_010803.1 PFAM: S23 ribosomal protein; KEGG: sun:SUN_0718 S23 ribosomal protein; S23 ribosomal protein 2048512 6355205 Clim_1864 Chlorobium limicola DSM 245 S23 ribosomal protein YP_001943881.1 2048141 R 290315 CDS YP_001943882.1 189347353 6355208 complement(2051888..2053237) 1 NC_010803.1 KEGG: cph:Cpha266_0592 hypothetical protein; hypothetical protein 2053237 6355208 Clim_1867 Chlorobium limicola DSM 245 hypothetical protein YP_001943882.1 2051888 R 290315 CDS YP_001943883.1 189347354 6355209 complement(2053636..2054931) 1 NC_010803.1 KEGG: cau:Caur_1775 forkhead-associated protein; hypothetical protein 2054931 6355209 Clim_1868 Chlorobium limicola DSM 245 hypothetical protein YP_001943883.1 2053636 R 290315 CDS YP_001943884.1 189347355 6355210 2055814..2056725 1 NC_010803.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 2056725 6355210 Clim_1869 Chlorobium limicola DSM 245 branched-chain amino acid aminotransferase YP_001943884.1 2055814 D 290315 CDS YP_001943885.1 189347356 6355211 2056743..2057915 1 NC_010803.1 KEGG: cph:Cpha266_0587 DNA-directed DNA polymerase; DNA-directed DNA polymerase 2057915 6355211 Clim_1870 Chlorobium limicola DSM 245 DNA-directed DNA polymerase YP_001943885.1 2056743 D 290315 CDS YP_001943886.1 189347357 6355212 complement(2058203..2063770) 1 NC_010803.1 PFAM: Hemolysin-type calcium-binding region; KEGG: amr:AM1_3186 hemolysin-type calcium-binding protein; hemolysin-type calcium-binding protein 2063770 6355212 Clim_1871 Chlorobium limicola DSM 245 hemolysin-type calcium-binding protein YP_001943886.1 2058203 R 290315 CDS YP_001943887.1 189347358 6355213 complement(2064180..2065823) 1 NC_010803.1 PFAM: glycosyl transferase group 1; KEGG: pme:NATL1_21041 hypothetical protein; group 1 glycosyl transferase 2065823 6355213 Clim_1872 Chlorobium limicola DSM 245 group 1 glycosyl transferase YP_001943887.1 2064180 R 290315 CDS YP_001943888.1 189347359 6355214 complement(2066204..2067490) 1 NC_010803.1 PFAM: glycosyl transferase group 1; KEGG: cph:Cpha266_2318 glycosyl transferase, group 1; group 1 glycosyl transferase 2067490 6355214 Clim_1873 Chlorobium limicola DSM 245 group 1 glycosyl transferase YP_001943888.1 2066204 R 290315 CDS YP_001943889.1 189347360 6355215 complement(2067539..2080543) 1 NC_010803.1 PFAM: Hemolysin-type calcium-binding region; KEGG: psp:PSPPH_0815 calcium binding hemolysin protein; hemolysin-type calcium-binding protein 2080543 6355215 Clim_1874 Chlorobium limicola DSM 245 hemolysin-type calcium-binding protein YP_001943889.1 2067539 R 290315 CDS YP_001943890.1 189347361 6355216 complement(2081548..2081667) 1 NC_010803.1 hypothetical protein 2081667 6355216 Clim_1875 Chlorobium limicola DSM 245 hypothetical protein YP_001943890.1 2081548 R 290315 CDS YP_001943891.1 189347362 6355217 complement(2081919..2082944) 1 NC_010803.1 PFAM: metallophosphoesterase; KEGG: sus:Acid_7022 metallophosphoesterase; metallophosphoesterase 2082944 6355217 Clim_1876 Chlorobium limicola DSM 245 metallophosphoesterase YP_001943891.1 2081919 R 290315 CDS YP_001943892.1 189347363 6355218 2083433..2083780 1 NC_010803.1 KEGG: mxa:MXAN_2068 translation initiation factor IF-2; hypothetical protein 2083780 6355218 Clim_1877 Chlorobium limicola DSM 245 hypothetical protein YP_001943892.1 2083433 D 290315 CDS YP_001943893.1 189347364 6355220 complement(2084611..2085603) 1 NC_010803.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pvi:Cvib_0649 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 2085603 6355220 Clim_1879 Chlorobium limicola DSM 245 NAD-dependent epimerase/dehydratase YP_001943893.1 2084611 R 290315 CDS YP_001943894.1 189347365 6355221 complement(2085859..2087013) 1 NC_010803.1 hypothetical protein 2087013 6355221 Clim_1880 Chlorobium limicola DSM 245 hypothetical protein YP_001943894.1 2085859 R 290315 CDS YP_001943895.1 189347366 6355222 complement(2087015..2087779) 1 NC_010803.1 PFAM: HpcH/HpaI aldolase; KEGG: mbu:Mbur_1595 2-dehydro-3-deoxyglucarate aldolase; HpcH/HpaI aldolase 2087779 6355222 Clim_1881 Chlorobium limicola DSM 245 HpcH/HpaI aldolase YP_001943895.1 2087015 R 290315 CDS YP_001943896.1 189347367 6355223 complement(2087776..2088447) 1 NC_010803.1 PFAM: cyclase family protein; KEGG: mbu:Mbur_1598 cyclase; cyclase family protein 2088447 6355223 Clim_1882 Chlorobium limicola DSM 245 cyclase family protein YP_001943896.1 2087776 R 290315 CDS YP_001943897.1 189347368 6355224 complement(2088452..2089129) 1 NC_010803.1 PFAM: acylneuraminate cytidylyltransferase; KEGG: mbu:Mbur_1594 acylneuraminate cytidylyltransferase; acylneuraminate cytidylyltransferase 2089129 6355224 Clim_1883 Chlorobium limicola DSM 245 acylneuraminate cytidylyltransferase YP_001943897.1 2088452 R 290315 CDS YP_001943898.1 189347369 6355225 complement(2089142..2090425) 1 NC_010803.1 KEGG: cth:Cthe_0640 cellulosome enzyme, dockerin type I; hypothetical protein 2090425 6355225 Clim_1884 Chlorobium limicola DSM 245 hypothetical protein YP_001943898.1 2089142 R 290315 CDS YP_001943899.1 189347370 6355226 complement(2090429..2090881) 1 NC_010803.1 PFAM: conserved hypothetical protein; KEGG: cac:CAC0836 beta-D-galactosidase; hypothetical protein 2090881 6355226 Clim_1885 Chlorobium limicola DSM 245 hypothetical protein YP_001943899.1 2090429 R 290315 CDS YP_001943900.1 189347371 6354716 complement(2090888..2091952) 1 NC_010803.1 PFAM: 3-dehydroquinate synthase; KEGG: mag:amb0135 3-dehydroquinate synthetase; 3-dehydroquinate synthase 2091952 6354716 Clim_1886 Chlorobium limicola DSM 245 3-dehydroquinate synthase YP_001943900.1 2090888 R 290315 CDS YP_001943901.1 189347372 6354941 complement(2091945..2092697) 1 NC_010803.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ctc:CTC00130 3-ketoacyl-(acyl-carrier-protein) reductase; short-chain dehydrogenase/reductase SDR 2092697 6354941 Clim_1887 Chlorobium limicola DSM 245 short-chain dehydrogenase/reductase SDR YP_001943901.1 2091945 R 290315 CDS YP_001943902.1 189347373 6354942 complement(2092931..2093929) 1 NC_010803.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mag:amb0132 predicted dehydrogenase and related protein; oxidoreductase domain-containing protein 2093929 6354942 Clim_1888 Chlorobium limicola DSM 245 oxidoreductase domain-containing protein YP_001943902.1 2092931 R 290315 CDS YP_001943903.1 189347374 6354943 complement(2094008..2094817) 1 NC_010803.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: nis:NIS_0664 D-3-phosphoglycerate dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 2094817 6354943 Clim_1889 Chlorobium limicola DSM 245 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001943903.1 2094008 R 290315 CDS YP_001943904.1 189347375 6354944 complement(2094889..2095725) 1 NC_010803.1 PFAM: Integrase catalytic region; KEGG: cph:Cpha266_1698 integrase, catalytic region; integrase catalytic subunit 2095725 6354944 Clim_1890 Chlorobium limicola DSM 245 integrase catalytic subunit YP_001943904.1 2094889 R 290315 CDS YP_001943905.1 189347376 6354946 complement(2096340..2096957) 1 NC_010803.1 KEGG: rpa:RPA3927 possible phosphoheptose isomerase; phosphoheptose isomerase 2096957 6354946 Clim_1892 Chlorobium limicola DSM 245 phosphoheptose isomerase YP_001943905.1 2096340 R 290315 CDS YP_001943906.1 189347377 6354948 2097536..2097829 1 NC_010803.1 PFAM: transposase IS3/IS911 family protein; KEGG: cph:Cpha266_2113 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2097829 6354948 Clim_1894 Chlorobium limicola DSM 245 transposase IS3/IS911 family protein YP_001943906.1 2097536 D 290315 CDS YP_001943907.1 189347378 6354949 2097826..2098746 1 NC_010803.1 PFAM: Integrase catalytic region; KEGG: cph:Cpha266_1954 integrase, catalytic region; integrase catalytic subunit 2098746 6354949 Clim_1895 Chlorobium limicola DSM 245 integrase catalytic subunit YP_001943907.1 2097826 D 290315 CDS YP_001943908.1 189347379 6354950 complement(2099152..2100243) 1 NC_010803.1 KEGG: sfr:Sfri_2831 hypothetical protein; hypothetical protein 2100243 6354950 Clim_1896 Chlorobium limicola DSM 245 hypothetical protein YP_001943908.1 2099152 R 290315 CDS YP_001943909.1 189347380 6354951 complement(2100247..2101164) 1 NC_010803.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: dvl:Dvul_2644 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 2101164 6354951 Clim_1897 Chlorobium limicola DSM 245 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001943909.1 2100247 R 290315 CDS YP_001943910.1 189347381 6354952 complement(2101157..2102251) 1 NC_010803.1 KEGG: sfr:Sfri_2831 hypothetical protein; hypothetical protein 2102251 6354952 Clim_1898 Chlorobium limicola DSM 245 hypothetical protein YP_001943910.1 2101157 R 290315 CDS YP_001943911.1 189347382 6354953 complement(2102230..2103582) 1 NC_010803.1 KEGG: gvi:glr3782 unknown protein; hypothetical protein 2103582 6354953 Clim_1899 Chlorobium limicola DSM 245 hypothetical protein YP_001943911.1 2102230 R 290315 CDS YP_001943912.1 189347383 6354954 complement(2104017..2105231) 1 NC_010803.1 KEGG: chu:CHU_2886 conserved hypothetical protein, possible O-antigen ligase-related; hypothetical protein 2105231 6354954 Clim_1900 Chlorobium limicola DSM 245 hypothetical protein YP_001943912.1 2104017 R 290315 CDS YP_001943913.1 189347384 6354956 complement(2106324..2107247) 1 NC_010803.1 PFAM: Integrase catalytic region; KEGG: cph:Cpha266_1954 integrase, catalytic region; integrase catalytic subunit 2107247 6354956 Clim_1902 Chlorobium limicola DSM 245 integrase catalytic subunit YP_001943913.1 2106324 R 290315 CDS YP_001943914.1 189347385 6354957 complement(2107244..2107537) 1 NC_010803.1 PFAM: transposase IS3/IS911 family protein; KEGG: cph:Cpha266_2113 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2107537 6354957 Clim_1903 Chlorobium limicola DSM 245 transposase IS3/IS911 family protein YP_001943914.1 2107244 R 290315 CDS YP_001943915.1 189347386 6354958 complement(2107979..2108347) 1 NC_010803.1 PFAM: S23 ribosomal protein; KEGG: cph:Cpha266_2609 S23 ribosomal protein; S23 ribosomal protein 2108347 6354958 Clim_1904 Chlorobium limicola DSM 245 S23 ribosomal protein YP_001943915.1 2107979 R 290315 CDS YP_001943916.1 189347387 6354959 complement(2108454..2109653) 1 NC_010803.1 PFAM: glycosyl transferase family 4; KEGG: hch:HCH_02401 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; glycosyl transferase family protein 2109653 6354959 Clim_1905 Chlorobium limicola DSM 245 glycosyl transferase family protein YP_001943916.1 2108454 R 290315 CDS YP_001943917.1 189347388 6354960 complement(2109686..2112073) 1 NC_010803.1 KEGG: cph:Cpha266_2649 lipopolysaccharide biosynthesis; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; capsular polysaccharide biosynthesis protein 2112073 6354960 Clim_1906 Chlorobium limicola DSM 245 capsular polysaccharide biosynthesis protein YP_001943917.1 2109686 R 290315 CDS YP_001943918.1 189347389 6354961 complement(2112151..2112726) 1 NC_010803.1 KEGG: plt:Plut_0763 hypothetical protein; hypothetical protein 2112726 6354961 Clim_1907 Chlorobium limicola DSM 245 hypothetical protein YP_001943918.1 2112151 R 290315 CDS YP_001943919.1 189347390 6354962 complement(2113086..2114327) 1 NC_010803.1 KEGG: ppd:Ppro_0062 hypothetical protein; hypothetical protein 2114327 6354962 Clim_1908 Chlorobium limicola DSM 245 hypothetical protein YP_001943919.1 2113086 R 290315 CDS YP_001943920.1 189347391 6354963 complement(2114317..2114925) 1 NC_010803.1 KEGG: hma:rrnAC2982 hypothetical protein; hypothetical protein 2114925 6354963 Clim_1909 Chlorobium limicola DSM 245 hypothetical protein YP_001943920.1 2114317 R 290315 CDS YP_001943921.1 189347392 6354964 complement(2114942..2115859) 1 NC_010803.1 KEGG: sfu:Sfum_2196 hypothetical protein; hypothetical protein 2115859 6354964 Clim_1910 Chlorobium limicola DSM 245 hypothetical protein YP_001943921.1 2114942 R 290315 CDS YP_001943922.1 189347393 6354965 complement(2115863..2116177) 1 NC_010803.1 KEGG: sfu:Sfum_2199 coenzyme PQQ synthesis D; hypothetical protein 2116177 6354965 Clim_1911 Chlorobium limicola DSM 245 hypothetical protein YP_001943922.1 2115863 R 290315 CDS YP_001943923.1 189347394 6354966 complement(2116276..2116476) 1 NC_010803.1 hypothetical protein 2116476 6354966 Clim_1912 Chlorobium limicola DSM 245 hypothetical protein YP_001943923.1 2116276 R 290315 CDS YP_001943924.1 189347395 6354967 complement(2116571..2117665) 1 NC_010803.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sfu:Sfum_2197 radical SAM domain protein; radical SAM protein 2117665 6354967 Clim_1913 Chlorobium limicola DSM 245 radical SAM protein YP_001943924.1 2116571 R 290315 CDS YP_001943925.1 189347396 6354968 complement(2117734..2118864) 1 NC_010803.1 PFAM: Radical SAM domain protein; KEGG: sfu:Sfum_2198 radical SAM domain protein; radical SAM protein 2118864 6354968 Clim_1914 Chlorobium limicola DSM 245 radical SAM protein YP_001943925.1 2117734 R 290315 CDS YP_001943926.1 189347397 6354969 complement(2118942..2120783) 1 NC_010803.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: amr:AM1_1912 ABC transporter, ATP-binding/permease protein; ABC transporter 2120783 6354969 Clim_1915 Chlorobium limicola DSM 245 ABC transporter YP_001943926.1 2118942 R 290315 CDS YP_001943927.1 189347398 6354970 complement(2121067..2121456) 1 NC_010803.1 hypothetical protein 2121456 6354970 Clim_1916 Chlorobium limicola DSM 245 hypothetical protein YP_001943927.1 2121067 R 290315 CDS YP_001943928.1 189347399 6354971 complement(2121490..2122479) 1 NC_010803.1 hypothetical protein 2122479 6354971 Clim_1917 Chlorobium limicola DSM 245 hypothetical protein YP_001943928.1 2121490 R 290315 CDS YP_001943929.1 189347400 6354972 complement(2122604..2123371) 1 NC_010803.1 KEGG: rpc:RPC_1817 hypothetical protein; hypothetical protein 2123371 6354972 Clim_1918 Chlorobium limicola DSM 245 hypothetical protein YP_001943929.1 2122604 R 290315 CDS YP_001943930.1 189347401 6354973 complement(2123349..2123558) 1 NC_010803.1 hypothetical protein 2123558 6354973 Clim_1919 Chlorobium limicola DSM 245 hypothetical protein YP_001943930.1 2123349 R 290315 CDS YP_001943931.1 189347402 6354974 complement(2123973..2124278) 1 NC_010803.1 KEGG: mba:Mbar_A2670 hypothetical protein; hypothetical protein 2124278 6354974 Clim_1920 Chlorobium limicola DSM 245 hypothetical protein YP_001943931.1 2123973 R 290315 CDS YP_001943932.1 189347403 6354975 complement(2124299..2125093) 1 NC_010803.1 KEGG: cch:Cag_0645 hypothetical protein; hypothetical protein 2125093 6354975 Clim_1921 Chlorobium limicola DSM 245 hypothetical protein YP_001943932.1 2124299 R 290315 CDS YP_001943933.1 189347404 6354976 2126109..2126258 1 NC_010803.1 hypothetical protein 2126258 6354976 Clim_1922 Chlorobium limicola DSM 245 hypothetical protein YP_001943933.1 2126109 D 290315 CDS YP_001943934.1 189347405 6354977 complement(2126284..2126583) 1 NC_010803.1 KEGG: mba:Mbar_A2670 hypothetical protein; hypothetical protein 2126583 6354977 Clim_1923 Chlorobium limicola DSM 245 hypothetical protein YP_001943934.1 2126284 R 290315 CDS YP_001943935.1 189347406 6354978 complement(2127046..2128368) 1 NC_010803.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: mba:Mbar_A0259 protease; peptidase S8/S53 subtilisin kexin sedolisin 2128368 6354978 Clim_1924 Chlorobium limicola DSM 245 peptidase S8/S53 subtilisin kexin sedolisin YP_001943935.1 2127046 R 290315 CDS YP_001943936.1 189347407 6354979 complement(2128500..2130851) 1 NC_010803.1 KEGG: rrs:RoseRS_1019 hypothetical protein; hypothetical protein 2130851 6354979 Clim_1925 Chlorobium limicola DSM 245 hypothetical protein YP_001943936.1 2128500 R 290315 CDS YP_001943937.1 189347408 6354980 2131170..2132603 1 NC_010803.1 PFAM: amidohydrolase; KEGG: bfr:BF4287 hypothetical protein; amidohydrolase 2132603 6354980 Clim_1926 Chlorobium limicola DSM 245 amidohydrolase YP_001943937.1 2131170 D 290315 CDS YP_001943938.1 189347409 6354981 complement(2132838..2133854) 1 NC_010803.1 PFAM: fructose-bisphosphate aldolase class-I; KEGG: tbd:Tbd_1513 fructose-bisphosphate aldolase; Fructose-bisphosphate aldolase 2133854 6354981 Clim_1927 Chlorobium limicola DSM 245 Fructose-bisphosphate aldolase YP_001943938.1 2132838 R 290315 CDS YP_001943939.1 189347410 6354982 2134131..2135327 1 NC_010803.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: pvi:Cvib_0955 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2135327 6354982 Clim_1928 Chlorobium limicola DSM 245 iron-containing alcohol dehydrogenase YP_001943939.1 2134131 D 290315 CDS YP_001943940.1 189347411 6354983 complement(2135425..2136390) 1 NC_010803.1 PFAM: protein of unknown function DUF1568; KEGG: cph:Cpha266_1427 protein of unknown function DUF1568; hypothetical protein 2136390 6354983 Clim_1929 Chlorobium limicola DSM 245 hypothetical protein YP_001943940.1 2135425 R 290315 CDS YP_001943941.1 189347412 6354984 2136648..2137436 1 NC_010803.1 PFAM: metallophosphoesterase; KEGG: plt:Plut_0506 Ser/Thr protein phosphatase family protein; metallophosphoesterase 2137436 6354984 Clim_1930 Chlorobium limicola DSM 245 metallophosphoesterase YP_001943941.1 2136648 D 290315 CDS YP_001943942.1 189347413 6354985 complement(2137893..2138813) 1 NC_010803.1 PFAM: Domain of unknown function DUF1814; KEGG: plt:Plut_0508 hypothetical protein; hypothetical protein 2138813 6354985 Clim_1931 Chlorobium limicola DSM 245 hypothetical protein YP_001943942.1 2137893 R 290315 CDS YP_001943943.1 189347414 6354986 complement(2138810..2139421) 1 NC_010803.1 KEGG: plt:Plut_0507 hypothetical protein; hypothetical protein 2139421 6354986 Clim_1932 Chlorobium limicola DSM 245 hypothetical protein YP_001943943.1 2138810 R 290315 CDS YP_001943944.1 189347415 6354987 2139652..2140440 1 NC_010803.1 KEGG: plt:Plut_0506 Ser/Thr protein phosphatase family protein; Ser/Thr protein phosphatase family protein 2140440 6354987 Clim_1933 Chlorobium limicola DSM 245 Ser/Thr protein phosphatase family protein YP_001943944.1 2139652 D 290315 CDS YP_001943945.1 189347416 6354989 complement(2140982..2142295) 1 NC_010803.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 2142295 clpX 6354989 clpX Chlorobium limicola DSM 245 ATP-dependent protease ATP-binding subunit ClpX YP_001943945.1 2140982 R 290315 CDS YP_001943946.1 189347417 6354990 complement(2142339..2142611) 1 NC_010803.1 KEGG: cph:Cpha266_0630 hypothetical protein; hypothetical protein 2142611 6354990 Clim_1935 Chlorobium limicola DSM 245 hypothetical protein YP_001943946.1 2142339 R 290315 CDS YP_001943947.1 189347418 6354991 complement(2142680..2144155) 1 NC_010803.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 2144155 gltD 6354991 gltD Chlorobium limicola DSM 245 glutamate synthase subunit beta YP_001943947.1 2142680 R 290315 CDS YP_001943948.1 189347419 6354992 complement(2144204..2148805) 1 NC_010803.1 PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: cph:Cpha266_0628 glutamate synthase (NADH) large subunit; Glutamate synthase (ferredoxin) 2148805 6354992 Clim_1937 Chlorobium limicola DSM 245 Glutamate synthase (ferredoxin) YP_001943948.1 2144204 R 290315 CDS YP_001943949.1 189347420 6354993 complement(2148931..2149674) 1 NC_010803.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 2149674 gpmA 6354993 gpmA Chlorobium limicola DSM 245 phosphoglyceromutase YP_001943949.1 2148931 R 290315 CDS YP_001943950.1 189347421 6354994 2150148..2151407 1 NC_010803.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: cph:Cpha266_0626 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 2151407 6354994 Clim_1939 Chlorobium limicola DSM 245 2-nitropropane dioxygenase YP_001943950.1 2150148 D 290315 CDS YP_001943951.1 189347422 6354995 2151485..2152510 1 NC_010803.1 KEGG: cph:Cpha266_0625 hypothetical protein; hypothetical protein 2152510 6354995 Clim_1940 Chlorobium limicola DSM 245 hypothetical protein YP_001943951.1 2151485 D 290315 CDS YP_001943952.1 189347423 6354996 complement(2152870..2153418) 1 NC_010803.1 KEGG: cph:Cpha266_1413 RNA polymerase, sigma-24 subunit, ECF subfamily; hypothetical protein 2153418 6354996 Clim_1941 Chlorobium limicola DSM 245 hypothetical protein YP_001943952.1 2152870 R 290315 CDS YP_001943953.1 189347424 6354997 complement(2153461..2153919) 1 NC_010803.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: cph:Cpha266_0624 tRNA-adenosine deaminase; zinc-binding CMP/dCMP deaminase 2153919 6354997 Clim_1942 Chlorobium limicola DSM 245 zinc-binding CMP/dCMP deaminase YP_001943953.1 2153461 R 290315 CDS YP_001943954.1 189347425 6354998 2154043..2155221 1 NC_010803.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 2155221 sucC 6354998 sucC Chlorobium limicola DSM 245 succinyl-CoA synthetase subunit beta YP_001943954.1 2154043 D 290315 CDS YP_001943955.1 189347426 6354999 complement(2155645..2157618) 1 NC_010803.1 PFAM: ABC transporter; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: cph:Cpha266_0622 ABC transporter; ABC transporter 2157618 6354999 Clim_1944 Chlorobium limicola DSM 245 ABC transporter YP_001943955.1 2155645 R 290315 CDS YP_001943956.1 189347427 6355000 complement(2157615..2158583) 1 NC_010803.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: cph:Cpha266_0621 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 2158583 6355000 Clim_1945 Chlorobium limicola DSM 245 RND family efflux transporter MFP subunit YP_001943956.1 2157615 R 290315 CDS YP_001943957.1 189347428 6355001 complement(2158567..2159862) 1 NC_010803.1 PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_0620 outer membrane efflux protein; outer membrane efflux protein 2159862 6355001 Clim_1946 Chlorobium limicola DSM 245 outer membrane efflux protein YP_001943957.1 2158567 R 290315 CDS YP_001943958.1 189347429 6355002 complement(2160035..2160487) 1 NC_010803.1 hypothetical protein 2160487 6355002 Clim_1947 Chlorobium limicola DSM 245 hypothetical protein YP_001943958.1 2160035 R 290315 CDS YP_001943959.1 189347430 6355003 2160659..2162611 1 NC_010803.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: cph:Cpha266_0618 ABC transporter; ABC transporter 2162611 6355003 Clim_1948 Chlorobium limicola DSM 245 ABC transporter YP_001943959.1 2160659 D 290315 CDS YP_001943960.1 189347431 6355004 complement(2162622..2166815) 1 NC_010803.1 KEGG: cph:Cpha266_0617 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 2166815 6355004 Clim_1949 Chlorobium limicola DSM 245 multi-sensor hybrid histidine kinase YP_001943960.1 2162622 R 290315 CDS YP_001943961.1 189347432 6355005 complement(2167110..2167427) 1 NC_010803.1 PFAM: small multidrug resistance protein; KEGG: cph:Cpha266_0616 small multidrug resistance protein; small multidrug resistance protein 2167427 6355005 Clim_1950 Chlorobium limicola DSM 245 small multidrug resistance protein YP_001943961.1 2167110 R 290315 CDS YP_001943962.1 189347433 6355006 complement(2167434..2168633) 1 NC_010803.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: cph:Cpha266_0615 oxidoreductase domain protein; oxidoreductase domain-containing protein 2168633 6355006 Clim_1951 Chlorobium limicola DSM 245 oxidoreductase domain-containing protein YP_001943962.1 2167434 R 290315 CDS YP_001943963.1 189347434 6355007 complement(2168642..2170063) 1 NC_010803.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 2170063 6355007 Clim_1952 Chlorobium limicola DSM 245 coproporphyrinogen III oxidase YP_001943963.1 2168642 R 290315 CDS YP_001943964.1 189347435 6355008 2170193..2170708 1 NC_010803.1 KEGG: cch:Cag_0286 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 2170708 6355008 Clim_1953 Chlorobium limicola DSM 245 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_001943964.1 2170193 D 290315 CDS YP_001943965.1 189347436 6355009 2170695..2171201 1 NC_010803.1 PFAM: protein of unknown function DUF985; KEGG: cte:CT0370 hypothetical protein; hypothetical protein 2171201 6355009 Clim_1954 Chlorobium limicola DSM 245 hypothetical protein YP_001943965.1 2170695 D 290315 CDS YP_001943966.1 189347437 6355010 2171398..2172699 1 NC_010803.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cph:Cpha266_0611 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2172699 6355010 Clim_1955 Chlorobium limicola DSM 245 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001943966.1 2171398 D 290315 CDS YP_001943967.1 189347438 6355011 2172696..2172908 1 NC_010803.1 KEGG: cph:Cpha266_0610 hypothetical protein; hypothetical protein 2172908 6355011 Clim_1956 Chlorobium limicola DSM 245 hypothetical protein YP_001943967.1 2172696 D 290315 CDS YP_001943968.1 189347439 6355012 2173046..2174245 1 NC_010803.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase 2174245 6355012 Clim_1957 Chlorobium limicola DSM 245 acetylornithine aminotransferase YP_001943968.1 2173046 D 290315 CDS YP_001943969.1 189347440 6355013 2174271..2174465 1 NC_010803.1 KEGG: cte:CT0366 hypothetical protein; hypothetical protein 2174465 6355013 Clim_1958 Chlorobium limicola DSM 245 hypothetical protein YP_001943969.1 2174271 D 290315 CDS YP_001943970.1 189347441 6355014 2174554..2175267 1 NC_010803.1 KEGG: azo:azo1317 hypothetical protein; hypothetical protein 2175267 6355014 Clim_1959 Chlorobium limicola DSM 245 hypothetical protein YP_001943970.1 2174554 D 290315 CDS YP_001943971.1 189347442 6355015 complement(2175236..2176051) 1 NC_010803.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: plt:Plut_1585 TonB-like; TonB family protein 2176051 6355015 Clim_1960 Chlorobium limicola DSM 245 TonB family protein YP_001943971.1 2175236 R 290315 CDS YP_001943972.1 189347443 6355016 complement(2176084..2176608) 1 NC_010803.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: cph:Cpha266_0605 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 2176608 6355016 Clim_1961 Chlorobium limicola DSM 245 biopolymer transport protein ExbD/TolR YP_001943972.1 2176084 R 290315 CDS YP_001943973.1 189347444 6355017 complement(2176611..2177144) 1 NC_010803.1 KEGG: cph:Cpha266_0604 hypothetical protein; hypothetical protein 2177144 6355017 Clim_1962 Chlorobium limicola DSM 245 hypothetical protein YP_001943973.1 2176611 R 290315 CDS YP_001943974.1 189347445 6355018 complement(2177150..2177896) 1 NC_010803.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: cph:Cpha266_0603 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 2177896 6355018 Clim_1963 Chlorobium limicola DSM 245 MotA/TolQ/ExbB proton channel YP_001943974.1 2177150 R 290315 CDS YP_001943975.1 189347446 6355019 2178129..2180027 1 NC_010803.1 KEGG: cph:Cpha266_0602 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein; DNA primase 2180027 6355019 Clim_1964 Chlorobium limicola DSM 245 DNA primase YP_001943975.1 2178129 D 290315 CDS YP_001943976.1 189347447 6355020 complement(2180109..2181434) 1 NC_010803.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 2181434 glyA 6355020 glyA Chlorobium limicola DSM 245 serine hydroxymethyltransferase YP_001943976.1 2180109 R 290315 CDS YP_001943977.1 189347448 6355021 complement(2181465..2182748) 1 NC_010803.1 KEGG: cph:Cpha266_0600 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase 2182748 6355021 Clim_1966 Chlorobium limicola DSM 245 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001943977.1 2181465 R 290315 CDS YP_001943978.1 189347449 6355471 2182981..2184837 1 NC_010803.1 PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: cph:Cpha266_0599 carbamoyl-phosphate synthase large subunit; carbamoyl-phosphate synthetase large chain domain-containing protein 2184837 6355471 Clim_1967 Chlorobium limicola DSM 245 carbamoyl-phosphate synthetase large chain domain-containing protein YP_001943978.1 2182981 D 290315 CDS YP_001943979.1 189347450 6355472 complement(2184910..2185446) 1 NC_010803.1 KEGG: cph:Cpha266_1999 hypothetical protein; hypothetical protein 2185446 6355472 Clim_1968 Chlorobium limicola DSM 245 hypothetical protein YP_001943979.1 2184910 R 290315 CDS YP_001943980.1 189347451 6355473 complement(2185455..2186339) 1 NC_010803.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cph:Cpha266_2000 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2186339 6355473 Clim_1969 Chlorobium limicola DSM 245 short-chain dehydrogenase/reductase SDR YP_001943980.1 2185455 R 290315 CDS YP_001943981.1 189347452 6355474 complement(2186317..2187618) 1 NC_010803.1 PFAM: ribulose bisphosphate carboxylase large chain; KEGG: plt:Plut_0412 ribulose-bisphosphate carboxylase; RuBisCO-like protein 2187618 6355474 Clim_1970 Chlorobium limicola DSM 245 RuBisCO-like protein YP_001943981.1 2186317 R 290315 CDS YP_001943982.1 189347453 6355475 complement(2187707..2188588) 1 NC_010803.1 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: cph:Cpha266_0194 aldolase; aldolase 2188588 6355475 Clim_1971 Chlorobium limicola DSM 245 aldolase YP_001943982.1 2187707 R 290315 CDS YP_001943983.1 189347454 6355476 complement(2188655..2190772) 1 NC_010803.1 PFAM: class II aldolase/adducin family protein; short-chain dehydrogenase/reductase SDR; KEGG: cph:Cpha266_0195 short chain dehydrogenase; short chain dehydrogenase 2190772 6355476 Clim_1972 Chlorobium limicola DSM 245 short chain dehydrogenase YP_001943983.1 2188655 R 290315 CDS YP_001943984.1 189347455 6355477 complement(2190843..2191061) 1 NC_010803.1 KEGG: plt:Plut_0409 hypothetical protein; hypothetical protein 2191061 6355477 Clim_1973 Chlorobium limicola DSM 245 hypothetical protein YP_001943984.1 2190843 R 290315 CDS YP_001943985.1 189347456 6355478 complement(2191098..2191709) 1 NC_010803.1 PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: plt:Plut_0408 2-vinyl bacteriochlorophyllide hydratase; 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD 2191709 6355478 Clim_1974 Chlorobium limicola DSM 245 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD YP_001943985.1 2191098 R 290315 CDS YP_001943986.1 189347457 6355479 2191878..2193284 1 NC_010803.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: plt:Plut_0407 elongator protein 3/MiaB/NifB; radical SAM protein 2193284 6355479 Clim_1975 Chlorobium limicola DSM 245 radical SAM protein YP_001943986.1 2191878 D 290315 CDS YP_001943987.1 189347458 6355480 2193524..2194267 1 NC_010803.1 KEGG: cte:CT1620 hypothetical protein; hypothetical protein 2194267 6355480 Clim_1976 Chlorobium limicola DSM 245 hypothetical protein YP_001943987.1 2193524 D 290315 CDS YP_001943988.1 189347459 6355481 complement(2194516..2195574) 1 NC_010803.1 PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: cph:Cpha266_2534 protein of unknown function DUF900, hydrolase family protein; hypothetical protein 2195574 6355481 Clim_1977 Chlorobium limicola DSM 245 hypothetical protein YP_001943988.1 2194516 R 290315 CDS YP_001943989.1 189347460 6355482 complement(2196068..2197696) 1 NC_010803.1 catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 2197696 6355482 Clim_1978 Chlorobium limicola DSM 245 hydroxylamine reductase YP_001943989.1 2196068 R 290315 CDS YP_001943990.1 189347461 6355483 complement(2197751..2198158) 1 NC_010803.1 PFAM: hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: pvi:Cvib_1456 hypothetical protein; hypothetical protein 2198158 6355483 Clim_1979 Chlorobium limicola DSM 245 hypothetical protein YP_001943990.1 2197751 R 290315 CDS YP_001943991.1 189347462 6355484 complement(2198160..2199062) 1 NC_010803.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cte:CT1701 iron-sulfur cluster-binding protein; 4Fe-4S ferredoxin 2199062 6355484 Clim_1980 Chlorobium limicola DSM 245 4Fe-4S ferredoxin YP_001943991.1 2198160 R 290315 CDS YP_001943992.1 189347463 6355485 complement(2199059..2199565) 1 NC_010803.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: plt:Plut_1672 hypothetical protein; BadM/Rrf2 family transcriptional regulator 2199565 6355485 Clim_1981 Chlorobium limicola DSM 245 BadM/Rrf2 family transcriptional regulator YP_001943992.1 2199059 R 290315 CDS YP_001943993.1 189347464 6355486 2199815..2200750 1 NC_010803.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cph:Cpha266_0508 methyltransferase type 12; type 12 methyltransferase 2200750 6355486 Clim_1982 Chlorobium limicola DSM 245 type 12 methyltransferase YP_001943993.1 2199815 D 290315 CDS YP_001943994.1 189347465 6355487 2200832..2201284 1 NC_010803.1 KEGG: cph:Cpha266_0507 cytochrome c; cytochrome c 2201284 6355487 Clim_1983 Chlorobium limicola DSM 245 cytochrome c YP_001943994.1 2200832 D 290315 CDS YP_001943995.1 189347466 6355488 2201476..2202501 1 NC_010803.1 PFAM: peptidase M50; KEGG: cph:Cpha266_0506 peptidase M50; peptidase M50 2202501 6355488 Clim_1984 Chlorobium limicola DSM 245 peptidase M50 YP_001943995.1 2201476 D 290315 CDS YP_001943996.1 189347467 6355489 2202498..2203403 1 NC_010803.1 KEGG: cph:Cpha266_0505 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 2203403 6355489 Clim_1985 Chlorobium limicola DSM 245 dihydropteroate synthase YP_001943996.1 2202498 D 290315 CDS YP_001943997.1 189347468 6355490 2203495..2207031 1 NC_010803.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: cph:Cpha266_0504 chromosome segregation protein SMC; chromosome segregation protein SMC 2207031 6355490 Clim_1986 Chlorobium limicola DSM 245 chromosome segregation protein SMC YP_001943997.1 2203495 D 290315 CDS YP_001943998.1 189347469 6355491 2207049..2207741 1 NC_010803.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pvi:Cvib_1463 haloacid dehalogenase domain protein hydrolase; haloacid dehalogenase domain-containing protein hydrolase 2207741 6355491 Clim_1987 Chlorobium limicola DSM 245 haloacid dehalogenase domain-containing protein hydrolase YP_001943998.1 2207049 D 290315 CDS YP_001943999.1 189347470 6355492 2207761..2208255 1 NC_010803.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: cph:Cpha266_0502 NusB antitermination factor; NusB antitermination factor 2208255 6355492 Clim_1988 Chlorobium limicola DSM 245 NusB antitermination factor YP_001943999.1 2207761 D 290315 CDS YP_001944000.1 189347471 6355493 2208260..2208970 1 NC_010803.1 PFAM: metallophosphoesterase; KEGG: cph:Cpha266_2593 metallophosphoesterase; metallophosphoesterase 2208970 6355493 Clim_1989 Chlorobium limicola DSM 245 metallophosphoesterase YP_001944000.1 2208260 D 290315 CDS YP_001944001.1 189347472 6355494 2208976..2209614 1 NC_010803.1 KEGG: cph:Cpha266_0501 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; endonuclease III 2209614 6355494 Clim_1990 Chlorobium limicola DSM 245 endonuclease III YP_001944001.1 2208976 D 290315 CDS YP_001944002.1 189347473 6355495 complement(2209624..2210052) 1 NC_010803.1 KEGG: cph:Cpha266_0500 hypothetical protein; hypothetical protein 2210052 6355495 Clim_1991 Chlorobium limicola DSM 245 hypothetical protein YP_001944002.1 2209624 R 290315 CDS YP_001944003.1 189347474 6355496 complement(2210148..2211983) 1 NC_010803.1 TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; KEGG: cph:Cpha266_0499 para-aminobenzoate synthase, subunit I; para-aminobenzoate synthase subunit I 2211983 6355496 Clim_1992 Chlorobium limicola DSM 245 para-aminobenzoate synthase subunit I YP_001944003.1 2210148 R 290315 CDS YP_001944004.1 189347475 6355497 complement(2211994..2213553) 1 NC_010803.1 PFAM: Ppx/GppA phosphatase; metal-dependent phosphohydrolase HD sub domain; KEGG: cph:Cpha266_0498 Ppx/GppA phosphatase; Ppx/GppA phosphatase 2213553 6355497 Clim_1993 Chlorobium limicola DSM 245 Ppx/GppA phosphatase YP_001944004.1 2211994 R 290315 CDS YP_001944005.1 189347476 6355498 2214040..2214849 1 NC_010803.1 PFAM: phosphatidate cytidylyltransferase; KEGG: cph:Cpha266_0497 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 2214849 6355498 Clim_1994 Chlorobium limicola DSM 245 phosphatidate cytidylyltransferase YP_001944005.1 2214040 D 290315 CDS YP_001944006.1 189347477 6355499 2214874..2215833 1 NC_010803.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: cph:Cpha266_0496 translation factor SUA5; Sua5/YciO/YrdC/YwlC family protein 2215833 6355499 Clim_1995 Chlorobium limicola DSM 245 Sua5/YciO/YrdC/YwlC family protein YP_001944006.1 2214874 D 290315 CDS YP_001944007.1 189347478 6355500 complement(2215842..2217863) 1 NC_010803.1 KEGG: cph:Cpha266_0495 hypothetical protein; hypothetical protein 2217863 6355500 Clim_1996 Chlorobium limicola DSM 245 hypothetical protein YP_001944007.1 2215842 R 290315 CDS YP_001944008.1 189347479 6355501 complement(2217946..2218704) 1 NC_010803.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: pvi:Cvib_1473 ribosomal large subunit pseudouridine synthase B; pseudouridine synthase 2218704 6355501 Clim_1997 Chlorobium limicola DSM 245 pseudouridine synthase YP_001944008.1 2217946 R 290315 CDS YP_001944009.1 189347480 6355502 complement(2218712..2219377) 1 NC_010803.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: cph:Cpha266_0493 condensin subunit ScpB; segregation and condensation protein B 2219377 6355502 Clim_1998 Chlorobium limicola DSM 245 segregation and condensation protein B YP_001944009.1 2218712 R 290315 CDS YP_001944010.1 189347481 6355503 complement(2219380..2220162) 1 NC_010803.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2220162 6355503 Clim_1999 Chlorobium limicola DSM 245 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_001944010.1 2219380 R 290315 CDS YP_001944011.1 189347482 6355504 complement(2220185..2220790) 1 NC_010803.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 2220790 hisH 6355504 hisH Chlorobium limicola DSM 245 imidazole glycerol phosphate synthase subunit HisH YP_001944011.1 2220185 R 290315 CDS YP_001944012.1 189347483 6355505 2220965..2221810 1 NC_010803.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: cph:Cpha266_0490 ferredoxin--NADP(+) reductase subunit alpha; ferredoxin-NADP(+) reductase subunit alpha 2221810 6355505 Clim_2001 Chlorobium limicola DSM 245 ferredoxin-NADP(+) reductase subunit alpha YP_001944012.1 2220965 D 290315 CDS YP_001944013.1 189347484 6355506 2221919..2223361 1 NC_010803.1 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase 2223361 6355506 Clim_2002 Chlorobium limicola DSM 245 oxidoreductase YP_001944013.1 2221919 D 290315 CDS YP_001944014.1 189347485 6355507 2223431..2223835 1 NC_010803.1 PFAM: CopG domain protein DNA-binding domain protein; NikR nickel binding; KEGG: cph:Cpha266_0488 CopG family transcriptional regulator; CopG family transcriptional regulator 2223835 6355507 Clim_2003 Chlorobium limicola DSM 245 CopG family transcriptional regulator YP_001944014.1 2223431 D 290315 CDS YP_001944015.1 189347486 6355508 2223931..2224731 1 NC_010803.1 KEGG: cph:Cpha266_0487 hypothetical protein; hypothetical protein 2224731 6355508 Clim_2004 Chlorobium limicola DSM 245 hypothetical protein YP_001944015.1 2223931 D 290315 CDS YP_001944016.1 189347487 6355509 2224838..2225869 1 NC_010803.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: cph:Cpha266_0486 cobalamin (vitamin B12) biosynthesis CbiM protein; cobalamin (vitamin B12) biosynthesis protein CbiM 2225869 6355509 Clim_2005 Chlorobium limicola DSM 245 cobalamin (vitamin B12) biosynthesis protein CbiM YP_001944016.1 2224838 D 290315 CDS YP_001944017.1 189347488 6355510 2225866..2226621 1 NC_010803.1 TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: cph:Cpha266_0485 cobalt transport protein; cobalt ABC transporter inner membrane subunit CbiQ 2226621 6355510 Clim_2006 Chlorobium limicola DSM 245 cobalt ABC transporter inner membrane subunit CbiQ YP_001944017.1 2225866 D 290315 CDS YP_001944018.1 189347489 6355511 2226639..2227358 1 NC_010803.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: cph:Cpha266_0484 ABC transporter; ABC transporter 2227358 6355511 Clim_2007 Chlorobium limicola DSM 245 ABC transporter YP_001944018.1 2226639 D 290315 CDS YP_001944019.1 189347490 6355512 complement(2227422..2228336) 1 NC_010803.1 PFAM: protein of unknown function DUF88; KEGG: cph:Cpha266_0482 protein of unknown function DUF88; hypothetical protein 2228336 6355512 Clim_2008 Chlorobium limicola DSM 245 hypothetical protein YP_001944019.1 2227422 R 290315 CDS YP_001944020.1 189347491 6355513 complement(2228383..2229288) 1 NC_010803.1 PFAM: Auxin Efflux Carrier; KEGG: plt:Plut_1694 hypothetical protein; auxin efflux carrier 2229288 6355513 Clim_2009 Chlorobium limicola DSM 245 auxin efflux carrier YP_001944020.1 2228383 R 290315 CDS YP_001944021.1 189347492 6355514 complement(2229390..2230415) 1 NC_010803.1 PFAM: ferrochelatase; KEGG: cph:Cpha266_0481 ferrochelatase; ferrochelatase 2230415 6355514 Clim_2010 Chlorobium limicola DSM 245 ferrochelatase YP_001944021.1 2229390 R 290315 CDS YP_001944022.1 189347493 6355515 complement(2230417..2231502) 1 NC_010803.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cph:Cpha266_0480 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 2231502 6355515 Clim_2011 Chlorobium limicola DSM 245 RND family efflux transporter MFP subunit YP_001944022.1 2230417 R 290315 CDS YP_001944023.1 189347494 6355516 2231697..2232110 1 NC_010803.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 2232110 hisI 6355516 hisI Chlorobium limicola DSM 245 phosphoribosyl-AMP cyclohydrolase YP_001944023.1 2231697 D 290315 CDS YP_001944024.1 189347495 6355517 2232122..2232847 1 NC_010803.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: cph:Cpha266_0478 demethylmenaquinone methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase 2232847 6355517 Clim_2013 Chlorobium limicola DSM 245 ubiquinone/menaquinone biosynthesis methyltransferase YP_001944024.1 2232122 D 290315 CDS YP_001944025.1 189347496 6355518 complement(2232877..2233257) 1 NC_010803.1 KEGG: cph:Cpha266_0477 hypothetical protein; hypothetical protein 2233257 6355518 Clim_2014 Chlorobium limicola DSM 245 hypothetical protein YP_001944025.1 2232877 R 290315 CDS YP_001944026.1 189347497 6355519 complement(2233282..2233899) 1 NC_010803.1 PFAM: conserved hypothetical protein; KEGG: cph:Cpha266_0476 conserved hypothetical protein 730; hypothetical protein 2233899 6355519 Clim_2015 Chlorobium limicola DSM 245 hypothetical protein YP_001944026.1 2233282 R 290315 CDS YP_001944027.1 189347498 6355520 complement(2233909..2235930) 1 NC_010803.1 KEGG: cte:CT0457 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: NAD-dependent DNA ligase; NAD-dependent DNA ligase 2235930 6355520 Clim_2016 Chlorobium limicola DSM 245 NAD-dependent DNA ligase YP_001944027.1 2233909 R 290315 CDS YP_001944028.1 189347499 6355521 complement(2235950..2237491) 1 NC_010803.1 KEGG: cph:Cpha266_0474 hypothetical protein; hypothetical protein 2237491 6355521 Clim_2017 Chlorobium limicola DSM 245 hypothetical protein YP_001944028.1 2235950 R 290315 CDS YP_001944029.1 189347500 6355522 complement(2237522..2238238) 1 NC_010803.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: cph:Cpha266_0473 ABC transporter; ABC transporter 2238238 6355522 Clim_2018 Chlorobium limicola DSM 245 ABC transporter YP_001944029.1 2237522 R 290315 CDS YP_001944030.1 189347501 6355523 2238591..2239259 1 NC_010803.1 PFAM: protein of unknown function UPF0153; KEGG: cph:Cpha266_0471 protein of unknown function UPF0153; hypothetical protein 2239259 6355523 Clim_2019 Chlorobium limicola DSM 245 hypothetical protein YP_001944030.1 2238591 D 290315 CDS YP_001944031.1 189347502 6355524 2239280..2239519 1 NC_010803.1 KEGG: cph:Cpha266_0470 hypothetical protein; hypothetical protein 2239519 6355524 Clim_2020 Chlorobium limicola DSM 245 hypothetical protein YP_001944031.1 2239280 D 290315 CDS YP_001944032.1 189347503 6355525 complement(2239583..2240638) 1 NC_010803.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: cte:CT1724 arsenite efflux transporter; arsenical-resistance protein 2240638 6355525 Clim_2021 Chlorobium limicola DSM 245 arsenical-resistance protein YP_001944032.1 2239583 R 290315 CDS YP_001944033.1 189347504 6355526 complement(2240643..2241071) 1 NC_010803.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: cph:Cpha266_0465 protein tyrosine phosphatase; protein tyrosine phosphatase 2241071 6355526 Clim_2022 Chlorobium limicola DSM 245 protein tyrosine phosphatase YP_001944033.1 2240643 R 290315 CDS YP_001944034.1 189347505 6355527 complement(2241109..2242161) 1 NC_010803.1 PFAM: permease; KEGG: cte:CT1726 hypothetical protein; permease 2242161 6355527 Clim_2023 Chlorobium limicola DSM 245 permease YP_001944034.1 2241109 R 290315 CDS YP_001944035.1 189347506 6355528 complement(2242179..2242574) 1 NC_010803.1 SMART: Rhodanese domain protein; KEGG: cph:Cpha266_0463 rhodanese domain protein; rhodanese domain-containing protein 2242574 6355528 Clim_2024 Chlorobium limicola DSM 245 rhodanese domain-containing protein YP_001944035.1 2242179 R 290315 CDS YP_001944036.1 189347507 6355529 complement(2242592..2242828) 1 NC_010803.1 TIGRFAM: redox-active disulfide protein 2; KEGG: cch:Cag_0399 redox-active disulfide protein 2; redox-active disulfide protein 2 2242828 6355529 Clim_2025 Chlorobium limicola DSM 245 redox-active disulfide protein 2 YP_001944036.1 2242592 R 290315 CDS YP_001944037.1 189347508 6355530 complement(2242940..2243275) 1 NC_010803.1 PFAM: regulatory protein ArsR; KEGG: cte:CT1728 ArsR family transcriptional regulator; ArsR family transcriptional regulator 2243275 6355530 Clim_2026 Chlorobium limicola DSM 245 ArsR family transcriptional regulator YP_001944037.1 2242940 R 290315 CDS YP_001944038.1 189347509 6355531 2243420..2243851 1 NC_010803.1 PFAM: Secreted repeat of unknown function; KEGG: cph:Cpha266_0456 secreted repeat of unknown function; hypothetical protein 2243851 6355531 Clim_2027 Chlorobium limicola DSM 245 hypothetical protein YP_001944038.1 2243420 D 290315 CDS YP_001944039.1 189347510 6355532 complement(2244014..2244304) 1 NC_010803.1 KEGG: cph:Cpha266_0786 DNA-binding protein; XRE family transcriptional regulator 2244304 6355532 Clim_2028 Chlorobium limicola DSM 245 XRE family transcriptional regulator YP_001944039.1 2244014 R 290315 CDS YP_001944040.1 189347511 6355535 2244906..2245169 1 NC_010803.1 TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: gvi:gsr2534 hypothetical protein; CopG/Arc/MetJ family addiction module antidote protein 2245169 6355535 Clim_2031 Chlorobium limicola DSM 245 CopG/Arc/MetJ family addiction module antidote protein YP_001944040.1 2244906 D 290315 CDS YP_001944041.1 189347512 6355536 2245171..2245470 1 NC_010803.1 PFAM: plasmid stabilization system; KEGG: gvi:gsr3505 hypothetical protein; plasmid stabilization system 2245470 6355536 Clim_2032 Chlorobium limicola DSM 245 plasmid stabilization system YP_001944041.1 2245171 D 290315 CDS YP_001944042.1 189347513 6355537 2245489..2245749 1 NC_010803.1 KEGG: plt:Plut_1397 invertase/recombinase like protein; hypothetical protein 2245749 6355537 Clim_2033 Chlorobium limicola DSM 245 hypothetical protein YP_001944042.1 2245489 D 290315 CDS YP_001944043.1 189347514 6355539 complement(2245993..2247231) 1 NC_010803.1 TIGRFAM: chlorophyllide reductase subunit Y; PFAM: oxidoreductase/nitrogenase component 1; KEGG: cph:Cpha266_2075 chlorophyllide reductase subunit Y; chlorophyllide reductase subunit Y 2247231 6355539 Clim_2035 Chlorobium limicola DSM 245 chlorophyllide reductase subunit Y YP_001944043.1 2245993 R 290315 CDS YP_001944044.1 189347515 6355540 complement(2247212..2248216) 1 NC_010803.1 KEGG: cte:CT1827 hypothetical protein; hypothetical protein 2248216 6355540 Clim_2036 Chlorobium limicola DSM 245 hypothetical protein YP_001944044.1 2247212 R 290315 CDS YP_001944045.1 189347516 6355541 2248219..2249616 1 NC_010803.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 2249616 xseA 6355541 xseA Chlorobium limicola DSM 245 exodeoxyribonuclease VII large subunit YP_001944045.1 2248219 D 290315 CDS YP_001944046.1 189347517 6355542 complement(2249594..2250337) 1 NC_010803.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 2250337 6355542 Clim_2038 Chlorobium limicola DSM 245 3-deoxy-manno-octulosonate cytidylyltransferase YP_001944046.1 2249594 R 290315 CDS YP_001944047.1 189347518 6355543 complement(2250334..2250786) 1 NC_010803.1 PFAM: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: cph:Cpha266_2080 D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase 2250786 6355543 Clim_2039 Chlorobium limicola DSM 245 D-tyrosyl-tRNA(Tyr) deacylase YP_001944047.1 2250334 R 290315 CDS YP_001944048.1 189347519 6355544 complement(2250789..2251094) 1 NC_010803.1 PFAM: protein of unknown function DUF167; KEGG: cph:Cpha266_2081 protein of unknown function DUF167; hypothetical protein 2251094 6355544 Clim_2040 Chlorobium limicola DSM 245 hypothetical protein YP_001944048.1 2250789 R 290315 CDS YP_001944049.1 189347520 6355545 complement(2251106..2251393) 1 NC_010803.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 2251393 gatC 6355545 gatC Chlorobium limicola DSM 245 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_001944049.1 2251106 R 290315 CDS YP_001944050.1 189347521 6355546 complement(2251422..2252765) 1 NC_010803.1 KEGG: cph:Cpha266_2083 citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; citrate synthase I 2252765 6355546 Clim_2042 Chlorobium limicola DSM 245 citrate synthase I YP_001944050.1 2251422 R 290315 CDS YP_001944051.1 189347522 6355548 complement(2253203..2254252) 1 NC_010803.1 PFAM: OmpA/MotB domain protein; KEGG: cph:Cpha266_2084 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 2254252 6355548 Clim_2043 Chlorobium limicola DSM 245 OmpA/MotB domain-containing protein YP_001944051.1 2253203 R 290315 CDS YP_001944052.1 189347523 6355022 complement(2254249..2254998) 1 NC_010803.1 KEGG: cph:Cpha266_2085 hypothetical protein; hypothetical protein 2254998 6355022 Clim_2044 Chlorobium limicola DSM 245 hypothetical protein YP_001944052.1 2254249 R 290315 CDS YP_001944053.1 189347524 6355023 complement(2255018..2255224) 1 NC_010803.1 PFAM: Heavy metal transport/detoxification protein; KEGG: cph:Cpha266_2086 heavy metal transport/detoxification protein; heavy metal transport/detoxification protein 2255224 6355023 Clim_2045 Chlorobium limicola DSM 245 heavy metal transport/detoxification protein YP_001944053.1 2255018 R 290315 CDS YP_001944054.1 189347525 6355024 2255323..2255949 1 NC_010803.1 PFAM: hypothetical protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: cph:Cpha266_2087 tetratricopeptide TPR_2 repeat protein; hypothetical protein 2255949 6355024 Clim_2046 Chlorobium limicola DSM 245 hypothetical protein YP_001944054.1 2255323 D 290315 CDS YP_001944055.1 189347526 6355025 2256123..2257544 1 NC_010803.1 TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; KEGG: cph:Cpha266_2088 isochorismate synthases; isochorismate synthase 2257544 6355025 Clim_2047 Chlorobium limicola DSM 245 isochorismate synthase YP_001944055.1 2256123 D 290315 CDS YP_001944056.1 189347527 6355026 2257537..2259288 1 NC_010803.1 TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; PFAM: thiamine pyrophosphate protein TPP binding domain protein; KEGG: cph:Cpha266_2089 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 2259288 6355026 Clim_2048 Chlorobium limicola DSM 245 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase YP_001944056.1 2257537 D 290315 CDS YP_001944057.1 189347528 6355027 2259288..2260076 1 NC_010803.1 PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_2090 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2260076 6355027 Clim_2049 Chlorobium limicola DSM 245 alpha/beta hydrolase fold protein YP_001944057.1 2259288 D 290315 CDS YP_001944058.1 189347529 6355028 2260085..2260906 1 NC_010803.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase 2260906 6355028 Clim_2050 Chlorobium limicola DSM 245 naphthoate synthase YP_001944058.1 2260085 D 290315 CDS YP_001944059.1 189347530 6355029 2260903..2261973 1 NC_010803.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: cph:Cpha266_2092 O-succinylbenzoate-CoA synthase; mandelate racemase/muconate lactonizing protein 2261973 6355029 Clim_2051 Chlorobium limicola DSM 245 mandelate racemase/muconate lactonizing protein YP_001944059.1 2260903 D 290315 CDS YP_001944060.1 189347531 6355030 2261961..2263409 1 NC_010803.1 TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: cph:Cpha266_2093 O-succinylbenzoate-CoA ligase; o-succinylbenzoate--CoA ligase 2263409 6355030 Clim_2052 Chlorobium limicola DSM 245 o-succinylbenzoate--CoA ligase YP_001944060.1 2261961 D 290315 CDS YP_001944061.1 189347532 6355031 complement(2263531..2264121) 1 NC_010803.1 KEGG: cph:Cpha266_2094 hypothetical protein; hypothetical protein 2264121 6355031 Clim_2053 Chlorobium limicola DSM 245 hypothetical protein YP_001944061.1 2263531 R 290315 CDS YP_001944062.1 189347533 6355032 complement(2264093..2264839) 1 NC_010803.1 PFAM: dihydrodipicolinate reductase; KEGG: plt:Plut_0324 dihydrodipicolinate reductase; Dihydrodipicolinate reductase 2264839 6355032 Clim_2054 Chlorobium limicola DSM 245 Dihydrodipicolinate reductase YP_001944062.1 2264093 R 290315 CDS YP_001944063.1 189347534 6355033 complement(2264877..2265773) 1 NC_010803.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: cph:Cpha266_2096 chromosome segregation DNA-binding protein; parB-like partition protein 2265773 6355033 Clim_2055 Chlorobium limicola DSM 245 parB-like partition protein YP_001944063.1 2264877 R 290315 CDS YP_001944064.1 189347535 6355034 complement(2265790..2266587) 1 NC_010803.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cph:Cpha266_2097 chromosome segregation ATPase; Cobyrinic acid ac-diamide synthase 2266587 6355034 Clim_2056 Chlorobium limicola DSM 245 Cobyrinic acid ac-diamide synthase YP_001944064.1 2265790 R 290315 CDS YP_001944065.1 189347536 6355035 2266673..2267278 1 NC_010803.1 TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); KEGG: cch:Cag_1802 methylpurine-DNA glycosylase (MPG); DNA-3-methyladenine glycosylase 2267278 6355035 Clim_2057 Chlorobium limicola DSM 245 DNA-3-methyladenine glycosylase YP_001944065.1 2266673 D 290315 CDS YP_001944066.1 189347537 6355036 2267560..2268942 1 NC_010803.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: cph:Cpha266_2099 magnesium transporter; magnesium transporter 2268942 6355036 Clim_2058 Chlorobium limicola DSM 245 magnesium transporter YP_001944066.1 2267560 D 290315 CDS YP_001944067.1 189347538 6355037 2268980..2270656 1 NC_010803.1 PFAM: electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: plt:Plut_0319 electron-transferring-flavoprotein dehydrogenase; electron-transferring-flavoprotein dehydrogenase 2270656 6355037 Clim_2059 Chlorobium limicola DSM 245 electron-transferring-flavoprotein dehydrogenase YP_001944067.1 2268980 D 290315 CDS YP_001944068.1 189347539 6355038 2270660..2271736 1 NC_010803.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2271736 mnmA 6355038 mnmA Chlorobium limicola DSM 245 tRNA-specific 2-thiouridylase MnmA YP_001944068.1 2270660 D 290315 CDS YP_001944069.1 189347540 6355039 2271751..2272422 1 NC_010803.1 PFAM: phospholipase/Carboxylesterase; KEGG: cph:Cpha266_2101 phospholipase/carboxylesterase; phospholipase/carboxylesterase 2272422 6355039 Clim_2061 Chlorobium limicola DSM 245 phospholipase/carboxylesterase YP_001944069.1 2271751 D 290315 CDS YP_001944070.1 189347541 6355040 2272514..2276200 1 NC_010803.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 2276200 metH 6355040 metH Chlorobium limicola DSM 245 B12-dependent methionine synthase YP_001944070.1 2272514 D 290315 CDS YP_001944071.1 189347542 6355041 2276376..2276837 1 NC_010803.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cch:Cag_0205 bacterioferritin comigratory protein, thiol peroxidase; alkyl hydroperoxide reductase 2276837 6355041 Clim_2063 Chlorobium limicola DSM 245 alkyl hydroperoxide reductase YP_001944071.1 2276376 D 290315 CDS YP_001944072.1 189347543 6355042 2277070..2278677 1 NC_010803.1 KEGG: cph:Cpha266_2104 cytochrome c family protein; cytochrome c family protein 2278677 6355042 Clim_2064 Chlorobium limicola DSM 245 cytochrome c family protein YP_001944072.1 2277070 D 290315 CDS YP_001944073.1 189347544 6355043 2278674..2279279 1 NC_010803.1 PFAM: cytochrome B561; KEGG: cph:Cpha266_2105 cytochrome b561; cytochrome B561 2279279 6355043 Clim_2065 Chlorobium limicola DSM 245 cytochrome B561 YP_001944073.1 2278674 D 290315 CDS YP_001944074.1 189347545 6355044 complement(2279352..2279930) 1 NC_010803.1 hypothetical protein 2279930 6355044 Clim_2066 Chlorobium limicola DSM 245 hypothetical protein YP_001944074.1 2279352 R 290315 CDS YP_001944075.1 189347546 6355045 complement(2279990..2280457) 1 NC_010803.1 KEGG: ppd:Ppro_0225 hypothetical protein; hypothetical protein 2280457 6355045 Clim_2067 Chlorobium limicola DSM 245 hypothetical protein YP_001944075.1 2279990 R 290315 CDS YP_001944076.1 189347547 6355046 complement(2280462..2280932) 1 NC_010803.1 KEGG: cph:Cpha266_2141 hypothetical protein; hypothetical protein 2280932 6355046 Clim_2068 Chlorobium limicola DSM 245 hypothetical protein YP_001944076.1 2280462 R 290315 CDS YP_001944077.1 189347548 6355047 complement(2280937..2282619) 1 NC_010803.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: cph:Cpha266_2142 peptidoglycan-binding domain 1 protein; peptidoglycan-binding domain 1 protein 2282619 6355047 Clim_2069 Chlorobium limicola DSM 245 peptidoglycan-binding domain 1 protein YP_001944077.1 2280937 R 290315 CDS YP_001944078.1 189347549 6355048 complement(2282634..2283359) 1 NC_010803.1 KEGG: cph:Cpha266_2143 hypothetical protein; hypothetical protein 2283359 6355048 Clim_2070 Chlorobium limicola DSM 245 hypothetical protein YP_001944078.1 2282634 R 290315 CDS YP_001944079.1 189347550 6355049 complement(2283635..2284225) 1 NC_010803.1 KEGG: pvi:Cvib_0378 hypothetical protein; hypothetical protein 2284225 6355049 Clim_2071 Chlorobium limicola DSM 245 hypothetical protein YP_001944079.1 2283635 R 290315 CDS YP_001944080.1 189347551 6355050 complement(2284267..2284998) 1 NC_010803.1 PFAM: protein of unknown function DUF541; KEGG: cph:Cpha266_2145 protein of unknown function DUF541; hypothetical protein 2284998 6355050 Clim_2072 Chlorobium limicola DSM 245 hypothetical protein YP_001944080.1 2284267 R 290315 CDS YP_001944081.1 189347552 6355051 complement(2285022..2285678) 1 NC_010803.1 KEGG: cph:Cpha266_2146 hypothetical protein; hypothetical protein 2285678 6355051 Clim_2073 Chlorobium limicola DSM 245 hypothetical protein YP_001944081.1 2285022 R 290315 CDS YP_001944082.1 189347553 6355052 complement(2285942..2286607) 1 NC_010803.1 KEGG: cph:Cpha266_2147 hypothetical protein; hypothetical protein 2286607 6355052 Clim_2074 Chlorobium limicola DSM 245 hypothetical protein YP_001944082.1 2285942 R 290315 CDS YP_001944083.1 189347554 6355053 2287301..2288140 1 NC_010803.1 TIGRFAM: 6-phosphogluconolactonase; KEGG: cph:Cpha266_2149 6-phosphogluconolactonase; 6-phosphogluconolactonase 2288140 6355053 Clim_2075 Chlorobium limicola DSM 245 6-phosphogluconolactonase YP_001944083.1 2287301 D 290315 CDS YP_001944084.1 189347555 6355054 complement(2288108..2289538) 1 NC_010803.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 2289538 6355054 Clim_2076 Chlorobium limicola DSM 245 glucose-6-phosphate 1-dehydrogenase YP_001944084.1 2288108 R 290315 CDS YP_001944085.1 189347556 6355055 complement(2289553..2290452) 1 NC_010803.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 2290452 6355055 Clim_2077 Chlorobium limicola DSM 245 6-phosphogluconate dehydrogenase YP_001944085.1 2289553 R 290315 CDS YP_001944086.1 189347557 6355056 complement(2290473..2293445) 1 NC_010803.1 KEGG: cph:Cpha266_2152 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-4 domain protein; multi-sensor hybrid histidine kinase 2293445 6355056 Clim_2078 Chlorobium limicola DSM 245 multi-sensor hybrid histidine kinase YP_001944086.1 2290473 R 290315 CDS YP_001944087.1 189347558 6355057 complement(2293451..2294704) 1 NC_010803.1 PFAM: domain of unknown function DUF1745; KEGG: cph:Cpha266_2153 domain of unknown function DUF1745; hypothetical protein 2294704 6355057 Clim_2079 Chlorobium limicola DSM 245 hypothetical protein YP_001944087.1 2293451 R 290315 CDS YP_001944088.1 189347559 6355058 complement(2295055..2295774) 1 NC_010803.1 PFAM: protein of unknown function DUF541; KEGG: cph:Cpha266_2154 protein of unknown function DUF541; hypothetical protein 2295774 6355058 Clim_2080 Chlorobium limicola DSM 245 hypothetical protein YP_001944088.1 2295055 R 290315 CDS YP_001944089.1 189347560 6355059 complement(2295929..2297074) 1 NC_010803.1 PFAM: glycosyl transferase group 1; KEGG: cph:Cpha266_2155 glycosyl transferase, group 1; group 1 glycosyl transferase 2297074 6355059 Clim_2081 Chlorobium limicola DSM 245 group 1 glycosyl transferase YP_001944089.1 2295929 R 290315 CDS YP_001944090.1 189347561 6355060 complement(2297226..2297690) 1 NC_010803.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: plt:Plut_0303 hypothetical protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein 2297690 6355060 Clim_2082 Chlorobium limicola DSM 245 YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_001944090.1 2297226 R 290315 CDS YP_001944091.1 189347562 6355061 complement(2297828..2298415) 1 NC_010803.1 KEGG: cph:Cpha266_0309 outer surface protein; outer surface protein 2298415 6355061 Clim_2083 Chlorobium limicola DSM 245 outer surface protein YP_001944091.1 2297828 R 290315 CDS YP_001944092.1 189347563 6355062 complement(2298559..2299311) 1 NC_010803.1 PFAM: Patatin; KEGG: cph:Cpha266_2157 patatin; patatin 2299311 6355062 Clim_2084 Chlorobium limicola DSM 245 patatin YP_001944092.1 2298559 R 290315 CDS YP_001944093.1 189347564 6355063 complement(2299318..2300682) 1 NC_010803.1 PFAM: Aldehyde Dehydrogenase_; KEGG: cph:Cpha266_2158 aldehyde dehydrogenase; aldehyde dehydrogenase 2300682 6355063 Clim_2085 Chlorobium limicola DSM 245 aldehyde dehydrogenase YP_001944093.1 2299318 R 290315 CDS YP_001944094.1 189347565 6355064 complement(2300731..2302524) 1 NC_010803.1 PFAM: ABC transporter transmembrane region; ABC transporter; SMART: AAA ATPase; KEGG: cph:Cpha266_2159 ABC transporter; ABC transporter 2302524 6355064 Clim_2086 Chlorobium limicola DSM 245 ABC transporter YP_001944094.1 2300731 R 290315 CDS YP_001944095.1 189347566 6355065 2302735..2303481 1 NC_010803.1 PFAM: Integral membrane protein TerC; KEGG: cph:Cpha266_2160 integral membrane protein TerC; integral membrane protein TerC 2303481 6355065 Clim_2087 Chlorobium limicola DSM 245 integral membrane protein TerC YP_001944095.1 2302735 D 290315 CDS YP_001944096.1 189347567 6355066 2303608..2306019 1 NC_010803.1 PFAM: peptidase S16 lon domain protein; KEGG: plt:Plut_0298 ATP-dependent protease; peptidase S16 lon domain-containing protein 2306019 6355066 Clim_2088 Chlorobium limicola DSM 245 peptidase S16 lon domain-containing protein YP_001944096.1 2303608 D 290315 CDS YP_001944097.1 189347568 6355067 2306022..2306918 1 NC_010803.1 KEGG: cph:Cpha266_2161 UspA domain protein; UspA domain-containing protein 2306918 6355067 Clim_2089 Chlorobium limicola DSM 245 UspA domain-containing protein YP_001944097.1 2306022 D 290315 CDS YP_001944098.1 189347569 6355068 complement(2306977..2307768) 1 NC_010803.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: cph:Cpha266_2163 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 2307768 6355068 Clim_2090 Chlorobium limicola DSM 245 tRNA/rRNA methyltransferase SpoU YP_001944098.1 2306977 R 290315 CDS YP_001944099.1 189347570 6355069 complement(2307771..2308559) 1 NC_010803.1 KEGG: cph:Cpha266_2164 hypothetical protein; hypothetical protein 2308559 6355069 Clim_2091 Chlorobium limicola DSM 245 hypothetical protein YP_001944099.1 2307771 R 290315 CDS YP_001944100.1 189347571 6355071 2308897..2310138 1 NC_010803.1 PFAM: peptidase U32; KEGG: cph:Cpha266_2165 peptidase U32; peptidase U32 2310138 6355071 Clim_2093 Chlorobium limicola DSM 245 peptidase U32 YP_001944100.1 2308897 D 290315 CDS YP_001944101.1 189347572 6355072 2310230..2311309 1 NC_010803.1 KEGG: cph:Cpha266_2166 hydrogenase/sulfur reductase, beta subunit; hydrogenase/sulfur reductase subunit beta 2311309 6355072 Clim_2094 Chlorobium limicola DSM 245 hydrogenase/sulfur reductase subunit beta YP_001944101.1 2310230 D 290315 CDS YP_001944102.1 189347573 6355073 2311363..2312187 1 NC_010803.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: cph:Cpha266_2167 oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain-containing protein 2312187 6355073 Clim_2095 Chlorobium limicola DSM 245 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_001944102.1 2311363 D 290315 CDS YP_001944103.1 189347574 6355074 2312200..2312958 1 NC_010803.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: cph:Cpha266_2168 NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 2312958 6355074 Clim_2096 Chlorobium limicola DSM 245 NADH ubiquinone oxidoreductase 20 kDa subunit YP_001944103.1 2312200 D 290315 CDS YP_001944104.1 189347575 6355075 2312955..2314229 1 NC_010803.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: cph:Cpha266_2169 nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase large subunit 2314229 6355075 Clim_2097 Chlorobium limicola DSM 245 nickel-dependent hydrogenase large subunit YP_001944104.1 2312955 D 290315 CDS YP_001944105.1 189347576 6355076 complement(2314270..2315025) 1 NC_010803.1 PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: cph:Cpha266_1210 DNA topoisomerase, type IA, zn finger domain protein; DNA topoisomerase type IA zn finger domain-containing protein 2315025 6355076 Clim_2098 Chlorobium limicola DSM 245 DNA topoisomerase type IA zn finger domain-containing protein YP_001944105.1 2314270 R 290315 CDS YP_001944106.1 189347577 6355078 2315415..2315759 1 NC_010803.1 PFAM: Protein of unknown function DUF1778; KEGG: cph:Cpha266_1211 hypothetical protein; hypothetical protein 2315759 6355078 Clim_2100 Chlorobium limicola DSM 245 hypothetical protein YP_001944106.1 2315415 D 290315 CDS YP_001944107.1 189347578 6355079 2315776..2316276 1 NC_010803.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cph:Cpha266_1212 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2316276 6355079 Clim_2101 Chlorobium limicola DSM 245 N-acetyltransferase GCN5 YP_001944107.1 2315776 D 290315 CDS YP_001944108.1 189347579 6355083 complement(2320297..2320524) 1 NC_010803.1 KEGG: cph:Cpha266_2113 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2320524 6355083 Clim_2105 Chlorobium limicola DSM 245 transposase IS3/IS911 family protein YP_001944108.1 2320297 R 290315 CDS YP_001944109.1 189347580 6355084 complement(2320841..2324824) 1 NC_010803.1 KEGG: vha:VIBHAR_p08265 hypothetical protein; hypothetical protein 2324824 6355084 Clim_2106 Chlorobium limicola DSM 245 hypothetical protein YP_001944109.1 2320841 R 290315 CDS YP_001944110.1 189347581 6355085 complement(2324848..2330724) 1 NC_010803.1 KEGG: cph:Cpha266_1222 superfamily I DNA and RNA helicase and helicase subunit; superfamily I DNA and RNA helicase and helicase subunit 2330724 6355085 Clim_2107 Chlorobium limicola DSM 245 superfamily I DNA and RNA helicase and helicase subunit YP_001944110.1 2324848 R 290315 CDS YP_001944111.1 189347582 6355086 complement(2330854..2330964) 1 NC_010803.1 hypothetical protein 2330964 6355086 Clim_2108 Chlorobium limicola DSM 245 hypothetical protein YP_001944111.1 2330854 R 290315 CDS YP_001944112.1 189347583 6355087 complement(2331012..2331407) 1 NC_010803.1 TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: cph:Cpha266_2176 death-on-curing family protein; death-on-curing family protein 2331407 6355087 Clim_2109 Chlorobium limicola DSM 245 death-on-curing family protein YP_001944112.1 2331012 R 290315 CDS YP_001944113.1 189347584 6355088 complement(2331404..2331625) 1 NC_010803.1 TIGRFAM: addiction module antidote; PFAM: SpoVT/AbrB domain protein; KEGG: cph:Cpha266_2175 tMazE family transcriptional regulator; MazE family transcriptional regulator 2331625 6355088 Clim_2110 Chlorobium limicola DSM 245 MazE family transcriptional regulator YP_001944113.1 2331404 R 290315 CDS YP_001944114.1 189347585 6355089 complement(2331698..2332561) 1 NC_010803.1 KEGG: fjo:Fjoh_0971 hypothetical protein; hypothetical protein 2332561 6355089 Clim_2111 Chlorobium limicola DSM 245 hypothetical protein YP_001944114.1 2331698 R 290315 CDS YP_001944115.1 189347586 6355090 complement(2332810..2332971) 1 NC_010803.1 hypothetical protein 2332971 6355090 Clim_2112 Chlorobium limicola DSM 245 hypothetical protein YP_001944115.1 2332810 R 290315 CDS YP_001944116.1 189347587 6355091 complement(2333317..2333745) 1 NC_010803.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: cph:Cpha266_2267 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 2333745 6355091 Clim_2113 Chlorobium limicola DSM 245 FKBP-type peptidylprolyl isomerase YP_001944116.1 2333317 R 290315 CDS YP_001944117.1 189347588 6355092 complement(2333888..2334973) 1 NC_010803.1 PFAM: MscS Mechanosensitive ion channel; KEGG: pvi:Cvib_0357 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS 2334973 6355092 Clim_2114 Chlorobium limicola DSM 245 mechanosensitive ion channel MscS YP_001944117.1 2333888 R 290315 CDS YP_001944118.1 189347589 6355093 complement(2335000..2336193) 1 NC_010803.1 PFAM: FAD dependent oxidoreductase; KEGG: cph:Cpha266_2269 FAD dependent oxidoreductase; FAD dependent oxidoreductase 2336193 6355093 Clim_2115 Chlorobium limicola DSM 245 FAD dependent oxidoreductase YP_001944118.1 2335000 R 290315 CDS YP_001944119.1 189347590 6355094 complement(2336370..2337044) 1 NC_010803.1 KEGG: cph:Cpha266_2271 acetyltransferase, CysE/LacA/LpxA/NodL family; carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein 2337044 6355094 Clim_2116 Chlorobium limicola DSM 245 carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein YP_001944119.1 2336370 R 290315 CDS YP_001944120.1 189347591 6355095 2337355..2338089 1 NC_010803.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: cte:CT1901 ABC transporter, ATP-binding protein; ABC transporter 2338089 6355095 Clim_2117 Chlorobium limicola DSM 245 ABC transporter YP_001944120.1 2337355 D 290315 CDS YP_001944121.1 189347592 6355096 2338233..2339741 1 NC_010803.1 PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cte:CT1903 BchE/P-methylase family protein; radical SAM protein 2339741 6355096 Clim_2118 Chlorobium limicola DSM 245 radical SAM protein YP_001944121.1 2338233 D 290315 CDS YP_001944122.1 189347593 6355097 2339899..2340171 1 NC_010803.1 PFAM: RNP-1 like RNA-binding protein; KEGG: cch:Cag_1551 RNA-binding region RNP-1 (RNA recognition motif); RNP-1 like RNA-binding protein 2340171 6355097 Clim_2119 Chlorobium limicola DSM 245 RNP-1 like RNA-binding protein YP_001944122.1 2339899 D 290315 CDS YP_001944123.1 189347594 6355098 2340375..2341778 1 NC_010803.1 SMART: metal-dependent phosphohydrolase HD region; KEGG: cph:Cpha266_2274 metal dependent phosphohydrolase; metal dependent phosphohydrolase 2341778 6355098 Clim_2120 Chlorobium limicola DSM 245 metal dependent phosphohydrolase YP_001944123.1 2340375 D 290315 CDS YP_001944124.1 189347595 6355099 2341852..2342181 1 NC_010803.1 KEGG: cph:Cpha266_2275 hypothetical protein; hypothetical protein 2342181 6355099 Clim_2121 Chlorobium limicola DSM 245 hypothetical protein YP_001944124.1 2341852 D 290315 CDS YP_001944125.1 189347596 6355100 2342185..2342976 1 NC_010803.1 PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_2276 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2342976 6355100 Clim_2122 Chlorobium limicola DSM 245 alpha/beta hydrolase fold protein YP_001944125.1 2342185 D 290315 CDS YP_001944126.1 189347597 6355101 complement(2343005..2344309) 1 NC_010803.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 2344309 6355101 Clim_2123 Chlorobium limicola DSM 245 3-phosphoshikimate 1-carboxyvinyltransferase YP_001944126.1 2343005 R 290315 CDS YP_001944127.1 189347598 6355102 complement(2344537..2344734) 1 NC_010803.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 2344734 rpsU 6355102 rpsU Chlorobium limicola DSM 245 30S ribosomal protein S21 YP_001944127.1 2344537 R 290315 CDS YP_001944128.1 189347599 6355919 complement(2344761..2345321) 1 NC_010803.1 KEGG: cph:Cpha266_2279 hypothetical protein; hypothetical protein 2345321 6355919 Clim_2125 Chlorobium limicola DSM 245 hypothetical protein YP_001944128.1 2344761 R 290315 CDS YP_001944129.1 189347600 6355920 2345665..2347038 1 NC_010803.1 PFAM: CBS domain containing protein; Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: cph:Cpha266_2280 cysteine synthase; pyridoxal-5'-phosphate-dependent protein subunit beta 2347038 6355920 Clim_2126 Chlorobium limicola DSM 245 pyridoxal-5'-phosphate-dependent protein subunit beta YP_001944129.1 2345665 D 290315 CDS YP_001944130.1 189347601 6355921 2347039..2347203 1 NC_010803.1 hypothetical protein 2347203 6355921 Clim_2127 Chlorobium limicola DSM 245 hypothetical protein YP_001944130.1 2347039 D 290315 CDS YP_001944131.1 189347602 6355922 2347278..2348402 1 NC_010803.1 KEGG: cph:Cpha266_2284 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 2348402 6355922 Clim_2128 Chlorobium limicola DSM 245 alanine racemase YP_001944131.1 2347278 D 290315 CDS YP_001944132.1 189347603 6355923 2348424..2348975 1 NC_010803.1 SMART: Helix-hairpin-helix DNA-binding class 1; KEGG: cph:Cpha266_2285 helix-hairpin-helix motif; helix-hairpin-helix DNA-binding class 1 2348975 6355923 Clim_2129 Chlorobium limicola DSM 245 helix-hairpin-helix DNA-binding class 1 YP_001944132.1 2348424 D 290315 CDS YP_001944133.1 189347604 6355924 2348976..2349836 1 NC_010803.1 KEGG: cph:Cpha266_2286 hypothetical protein; hypothetical protein 2349836 6355924 Clim_2130 Chlorobium limicola DSM 245 hypothetical protein YP_001944133.1 2348976 D 290315 CDS YP_001944134.1 189347605 6355925 complement(2349944..2350972) 1 NC_010803.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; KEGG: cch:Cag_0282 aspartate-semialdehyde dehydrogenase, USG-1 related; aspartate-semialdehyde dehydrogenase 2350972 6355925 Clim_2131 Chlorobium limicola DSM 245 aspartate-semialdehyde dehydrogenase YP_001944134.1 2349944 R 290315 CDS YP_001944135.1 189347606 6355926 complement(2350992..2352035) 1 NC_010803.1 TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: plt:Plut_0276 dihydrouridine synthase TIM-barrel protein nifR3; nifR3 family TIM-barrel protein 2352035 6355926 Clim_2132 Chlorobium limicola DSM 245 nifR3 family TIM-barrel protein YP_001944135.1 2350992 R 290315 CDS YP_001944136.1 189347607 6355927 complement(2352038..2353090) 1 NC_010803.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 2353090 recA 6355927 recA Chlorobium limicola DSM 245 recombinase A YP_001944136.1 2352038 R 290315 CDS YP_001944137.1 189347608 6355928 complement(2353128..2354117) 1 NC_010803.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; KR domain protein; KEGG: cph:Cpha266_2290 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 2354117 6355928 Clim_2134 Chlorobium limicola DSM 245 NAD-dependent epimerase/dehydratase YP_001944137.1 2353128 R 290315 CDS YP_001944138.1 189347609 6355929 2354160..2354351 1 NC_010803.1 hypothetical protein 2354351 6355929 Clim_2135 Chlorobium limicola DSM 245 hypothetical protein YP_001944138.1 2354160 D 290315 CDS YP_001944139.1 189347610 6355930 2354324..2355562 1 NC_010803.1 PFAM: peptidase M16 domain protein; KEGG: cph:Cpha266_2291 peptidase M16 domain protein; peptidase M16 domain-containing protein 2355562 6355930 Clim_2136 Chlorobium limicola DSM 245 peptidase M16 domain-containing protein YP_001944139.1 2354324 D 290315 CDS YP_001944140.1 189347611 6355931 2355662..2356945 1 NC_010803.1 TIGRFAM: trigger factor; PFAM: trigger factor domain protein; trigger factor domain; KEGG: cph:Cpha266_2292 trigger factor; trigger factor 2356945 6355931 Clim_2137 Chlorobium limicola DSM 245 trigger factor YP_001944140.1 2355662 D 290315 CDS YP_001944141.1 189347612 6355932 complement(2357056..2357436) 1 NC_010803.1 TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: pvi:Cvib_0336 holo-acyl-carrier-protein synthase; holo-acyl-carrier-protein synthase 2357436 6355932 Clim_2138 Chlorobium limicola DSM 245 holo-acyl-carrier-protein synthase YP_001944141.1 2357056 R 290315 CDS YP_001944142.1 189347613 6355933 complement(2357442..2358317) 1 NC_010803.1 KEGG: cph:Cpha266_2293 nicotinate-nucleotide pyrophosphorylase [carboxylating]; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 2358317 6355933 Clim_2139 Chlorobium limicola DSM 245 nicotinate-nucleotide pyrophosphorylase YP_001944142.1 2357442 R 290315 CDS YP_001944143.1 189347614 6355934 2358489..2358866 1 NC_010803.1 TIGRFAM: dihydroneopterin aldolase; KEGG: cph:Cpha266_2294 dihydroneopterin aldolase; dihydroneopterin aldolase 2358866 6355934 Clim_2140 Chlorobium limicola DSM 245 dihydroneopterin aldolase YP_001944143.1 2358489 D 290315 CDS YP_001944144.1 189347615 6355935 2358871..2359383 1 NC_010803.1 KEGG: plt:Plut_0268 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HppK; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 2359383 6355935 Clim_2141 Chlorobium limicola DSM 245 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_001944144.1 2358871 D 290315 CDS YP_001944145.1 189347616 6355936 2359509..2361071 1 NC_010803.1 PFAM: transposase IS4 family protein; KEGG: amt:Amet_3130 transposase, IS4 family protein; transposase IS4 family protein 2361071 6355936 Clim_2142 Chlorobium limicola DSM 245 transposase IS4 family protein YP_001944145.1 2359509 D 290315 CDS YP_001944146.1 189347617 6355937 complement(2361630..2362784) 1 NC_010803.1 KEGG: plt:Plut_0267 anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; arsenite-activated ATPase ArsA 2362784 6355937 Clim_2143 Chlorobium limicola DSM 245 arsenite-activated ATPase ArsA YP_001944146.1 2361630 R 290315 CDS YP_001944147.1 189347618 6355938 complement(2362798..2364594) 1 NC_010803.1 KEGG: cph:Cpha266_2298 hypothetical protein; hypothetical protein 2364594 6355938 Clim_2144 Chlorobium limicola DSM 245 hypothetical protein YP_001944147.1 2362798 R 290315 CDS YP_001944148.1 189347619 6355939 complement(2364868..2365110) 1 NC_010803.1 PFAM: bacteriochlorophyll C binding protein; KEGG: pvi:Cvib_0330 bacteriochlorophyll C binding protein; bacteriochlorophyll C binding protein 2365110 6355939 Clim_2145 Chlorobium limicola DSM 245 bacteriochlorophyll C binding protein YP_001944148.1 2364868 R 290315 CDS YP_001944149.1 189347620 6355940 complement(2365239..2365658) 1 NC_010803.1 KEGG: cph:Cpha266_2300 chlorosome envelope protein C; chlorosome envelope protein C 2365658 6355940 Clim_2146 Chlorobium limicola DSM 245 chlorosome envelope protein C YP_001944149.1 2365239 R 290315 CDS YP_001944150.1 189347621 6355941 complement(2365798..2367015) 1 NC_010803.1 KEGG: cph:Cpha266_2301 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; arsenite-activated ATPase ArsA 2367015 6355941 Clim_2147 Chlorobium limicola DSM 245 arsenite-activated ATPase ArsA YP_001944150.1 2365798 R 290315 CDS YP_001944151.1 189347622 6355942 2367407..2368204 1 NC_010803.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: cph:Cpha266_2302 dihydroorotate oxidase B, electron transfer subunit; oxidoreductase FAD/NAD(P)-binding domain-containing protein 2368204 6355942 Clim_2148 Chlorobium limicola DSM 245 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_001944151.1 2367407 D 290315 CDS YP_001944152.1 189347623 6355943 2368302..2368799 1 NC_010803.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cph:Cpha266_2303 single-strand binding protein; single-strand binding protein 2368799 6355943 Clim_2149 Chlorobium limicola DSM 245 single-strand binding protein YP_001944152.1 2368302 D 290315 CDS YP_001944153.1 189347624 6355944 2368873..2369919 1 NC_010803.1 TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: cph:Cpha266_2304 DNA polymerase III, delta subunit; DNA polymerase III subunit delta 2369919 6355944 Clim_2150 Chlorobium limicola DSM 245 DNA polymerase III subunit delta YP_001944153.1 2368873 D 290315 CDS YP_001944154.1 189347625 6355945 complement(2370287..2371297) 1 NC_010803.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: cph:Cpha266_2305 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 2371297 6355945 Clim_2151 Chlorobium limicola DSM 245 NAD-dependent epimerase/dehydratase YP_001944154.1 2370287 R 290315 CDS YP_001944155.1 189347626 6355946 2371513..2372727 1 NC_010803.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; aminotransferase class-III; KEGG: cph:Cpha266_2306 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase 2372727 6355946 Clim_2152 Chlorobium limicola DSM 245 8-amino-7-oxononanoate synthase YP_001944155.1 2371513 D 290315 CDS YP_001944156.1 189347627 6355947 2373062..2375548 1 NC_010803.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cph:Cpha266_2310 TonB-dependent receptor; TonB-dependent receptor 2375548 6355947 Clim_2153 Chlorobium limicola DSM 245 TonB-dependent receptor YP_001944156.1 2373062 D 290315 CDS YP_001944157.1 189347628 6355948 2375851..2379654 1 NC_010803.1 KEGG: plt:Plut_0255 magnesium-chelatase, subunit H; TIGRFAM: magnesium chelatase, H subunit; PFAM: CobN/magnesium chelatase; magnesium chelatase subunit H 2379654 6355948 Clim_2154 Chlorobium limicola DSM 245 magnesium chelatase subunit H YP_001944157.1 2375851 D 290315 CDS YP_001944158.1 189347629 6355949 2379684..2380130 1 NC_010803.1 KEGG: cph:Cpha266_2312 hypothetical protein; hypothetical protein 2380130 6355949 Clim_2155 Chlorobium limicola DSM 245 hypothetical protein YP_001944158.1 2379684 D 290315 CDS YP_001944159.1 189347630 6355950 2380276..2384109 1 NC_010803.1 catalyzes the formation of Mg-protoporphyrin IX from protoporphyrin IX and Mg(2+); first committed step of chlorophyll biosynthesis; magnesium chelatase subunit H 2384109 6355950 Clim_2156 Chlorobium limicola DSM 245 magnesium chelatase subunit H YP_001944159.1 2380276 D 290315 CDS YP_001944160.1 189347631 6355951 2384155..2384853 1 NC_010803.1 catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine; Mg-protoporphyrin IX methyl transferase 2384853 6355951 Clim_2157 Chlorobium limicola DSM 245 Mg-protoporphyrin IX methyl transferase YP_001944160.1 2384155 D 290315 CDS YP_001944161.1 189347632 6355952 2385002..2386642 1 NC_010803.1 KEGG: cph:Cpha266_2315 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; TIGRFAM: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 2386642 6355952 Clim_2158 Chlorobium limicola DSM 245 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase YP_001944161.1 2385002 D 290315 CDS YP_001944162.1 189347633 6355953 complement(2386722..2387141) 1 NC_010803.1 PFAM: heat shock protein Hsp20; KEGG: cph:Cpha266_2316 heat shock protein HSP20; heat shock protein Hsp20 2387141 6355953 Clim_2159 Chlorobium limicola DSM 245 heat shock protein Hsp20 YP_001944162.1 2386722 R 290315 CDS YP_001944163.1 189347634 6355954 complement(2387353..2399217) 1 NC_010803.1 PFAM: Hemolysin-type calcium-binding region; KEGG: cph:Cpha266_2335 hemolysin-type calcium-binding region; hemolysin-type calcium-binding protein 2399217 6355954 Clim_2160 Chlorobium limicola DSM 245 hemolysin-type calcium-binding protein YP_001944163.1 2387353 R 290315 CDS YP_001944164.1 189347635 6355955 complement(2399824..2400735) 1 NC_010803.1 KEGG: cph:Cpha266_2351 hypothetical protein; hypothetical protein 2400735 6355955 Clim_2161 Chlorobium limicola DSM 245 hypothetical protein YP_001944164.1 2399824 R 290315 CDS YP_001944165.1 189347636 6355956 complement(2400766..2401431) 1 NC_010803.1 KEGG: plt:Plut_0248 hypothetical protein; hypothetical protein 2401431 6355956 Clim_2162 Chlorobium limicola DSM 245 hypothetical protein YP_001944165.1 2400766 R 290315 CDS YP_001944166.1 189347637 6355957 2401631..2402992 1 NC_010803.1 PFAM: Peptidase M23; KEGG: plt:Plut_0247 peptidase, M23/M37 family; peptidase M23 2402992 6355957 Clim_2163 Chlorobium limicola DSM 245 peptidase M23 YP_001944166.1 2401631 D 290315 CDS YP_001944167.1 189347638 6355958 complement(2403066..2403479) 1 NC_010803.1 PFAM: Class I peptide chain release factor; KEGG: vfi:VFA1155 hypothetical protein; class I peptide chain release factor 2403479 6355958 Clim_2164 Chlorobium limicola DSM 245 class I peptide chain release factor YP_001944167.1 2403066 R 290315 CDS YP_001944168.1 189347639 6355959 complement(2403508..2404098) 1 NC_010803.1 KEGG: cph:Cpha266_1892 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase 2404098 6355959 Clim_2165 Chlorobium limicola DSM 245 HAD-superfamily hydrolase YP_001944168.1 2403508 R 290315 CDS YP_001944169.1 189347640 6355960 2404259..2404699 1 NC_010803.1 PFAM: protein of unknown function DUF937; KEGG: cph:Cpha266_2353 protein of unknown function DUF937; hypothetical protein 2404699 6355960 Clim_2166 Chlorobium limicola DSM 245 hypothetical protein YP_001944169.1 2404259 D 290315 CDS YP_001944170.1 189347641 6355961 complement(2404773..2405723) 1 NC_010803.1 PFAM: hypothetical protein; KEGG: cph:Cpha266_2355 hypothetical protein; hypothetical protein 2405723 6355961 Clim_2167 Chlorobium limicola DSM 245 hypothetical protein YP_001944170.1 2404773 R 290315 CDS YP_001944171.1 189347642 6355962 complement(2405919..2407094) 1 NC_010803.1 PFAM: glycosyl transferase family 2; KEGG: cph:Cpha266_2356 glycosyl transferase, family 2; family 2 glycosyl transferase 2407094 6355962 Clim_2168 Chlorobium limicola DSM 245 family 2 glycosyl transferase YP_001944171.1 2405919 R 290315 CDS YP_001944172.1 189347643 6355963 complement(2407165..2408043) 1 NC_010803.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 2408043 hisG 6355963 hisG Chlorobium limicola DSM 245 ATP phosphoribosyltransferase YP_001944172.1 2407165 R 290315 CDS YP_001944173.1 189347644 6355964 complement(2408065..2408823) 1 NC_010803.1 PFAM: metallophosphoesterase; KEGG: cph:Cpha266_2358 metallophosphoesterase; metallophosphoesterase 2408823 6355964 Clim_2170 Chlorobium limicola DSM 245 metallophosphoesterase YP_001944173.1 2408065 R 290315 CDS YP_001944174.1 189347645 6355965 complement(2408827..2409540) 1 NC_010803.1 PFAM: phosphatidate cytidylyltransferase; KEGG: cph:Cpha266_2359 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 2409540 6355965 Clim_2171 Chlorobium limicola DSM 245 phosphatidate cytidylyltransferase YP_001944174.1 2408827 R 290315 CDS YP_001944175.1 189347646 6355966 complement(2409698..2410699) 1 NC_010803.1 catalyzes the synthesis of bacteriochlorophyll c which is the primary pigment in the chlorosomes of the photosynthetic green bacteria; bacteriochlorophyll c synthase 2410699 6355966 Clim_2172 Chlorobium limicola DSM 245 bacteriochlorophyll c synthase YP_001944175.1 2409698 R 290315 CDS YP_001944176.1 189347647 6355967 complement(2410823..2412151) 1 NC_010803.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 2412151 6355967 Clim_2173 Chlorobium limicola DSM 245 (dimethylallyl)adenosine tRNA methylthiotransferase YP_001944176.1 2410823 R 290315 CDS YP_001944177.1 189347648 6355968 complement(2412301..2412912) 1 NC_010803.1 PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: cph:Cpha266_2362 nitrogen-fixing NifU domain protein; nitrogen-fixing NifU domain-containing protein 2412912 6355968 Clim_2174 Chlorobium limicola DSM 245 nitrogen-fixing NifU domain-containing protein YP_001944177.1 2412301 R 290315 CDS YP_001944178.1 189347649 6355969 complement(2412896..2414092) 1 NC_010803.1 PFAM: aminotransferase class V; KEGG: pvi:Cvib_0301 aminotransferase, class V; class V aminotransferase 2414092 6355969 Clim_2175 Chlorobium limicola DSM 245 class V aminotransferase YP_001944178.1 2412896 R 290315 CDS YP_001944179.1 189347650 6355970 complement(2414159..2415088) 1 NC_010803.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: cph:Cpha266_2364 cysteine synthase; cysteine synthase A 2415088 6355970 Clim_2176 Chlorobium limicola DSM 245 cysteine synthase A YP_001944179.1 2414159 R 290315 CDS YP_001944180.1 189347651 6355971 complement(2415112..2415825) 1 NC_010803.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cph:Cpha266_2365 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2415825 6355971 Clim_2177 Chlorobium limicola DSM 245 short-chain dehydrogenase/reductase SDR YP_001944180.1 2415112 R 290315 CDS YP_001944181.1 189347652 6355972 complement(2415989..2416897) 1 NC_010803.1 KEGG: cph:Cpha266_2366 helix-turn-helix domain protein; helix-turn-helix domain-containing protein 2416897 6355972 Clim_2178 Chlorobium limicola DSM 245 helix-turn-helix domain-containing protein YP_001944181.1 2415989 R 290315 CDS YP_001944182.1 189347653 6355973 complement(2417065..2419158) 1 NC_010803.1 KEGG: plt:Plut_0232 hypothetical protein; hypothetical protein 2419158 6355973 Clim_2179 Chlorobium limicola DSM 245 hypothetical protein YP_001944182.1 2417065 R 290315 CDS YP_001944183.1 189347654 6355974 2419337..2419759 1 NC_010803.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 2419759 6355974 Clim_2180 Chlorobium limicola DSM 245 nucleoside diphosphate kinase YP_001944183.1 2419337 D 290315 CDS YP_001944184.1 189347655 6355975 complement(2419916..2421046) 1 NC_010803.1 PFAM: protein of unknown function UPF0118; KEGG: pvi:Cvib_0294 protein of unknown function UPF0118; hypothetical protein 2421046 6355975 Clim_2181 Chlorobium limicola DSM 245 hypothetical protein YP_001944184.1 2419916 R 290315 CDS YP_001944185.1 189347656 6355976 complement(2421054..2421800) 1 NC_010803.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 2421800 6355976 Clim_2182 Chlorobium limicola DSM 245 16S ribosomal RNA methyltransferase RsmE YP_001944185.1 2421054 R 290315 CDS YP_001944186.1 189347657 6355977 complement(2421808..2422500) 1 NC_010803.1 PFAM: phosphoribosyltransferase; KEGG: cph:Cpha266_2371 phosphoribosyltransferase; phosphoribosyltransferase 2422500 6355977 Clim_2183 Chlorobium limicola DSM 245 phosphoribosyltransferase YP_001944186.1 2421808 R 290315 CDS YP_001944187.1 189347658 6355978 complement(2422516..2423502) 1 NC_010803.1 PFAM: ROK family protein; KEGG: cph:Cpha266_2372 ROK family protein; ROK family protein 2423502 6355978 Clim_2184 Chlorobium limicola DSM 245 ROK family protein YP_001944187.1 2422516 R 290315 CDS YP_001944188.1 189347659 6355979 complement(2423522..2424319) 1 NC_010803.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 2424319 6355979 Clim_2185 Chlorobium limicola DSM 245 UDP-N-acetylglucosamine acyltransferase YP_001944188.1 2423522 R 290315 CDS YP_001944189.1 189347660 6355980 complement(2424323..2426971) 1 NC_010803.1 KEGG: cph:Cpha266_2374 hypothetical protein; hypothetical protein 2426971 6355980 Clim_2186 Chlorobium limicola DSM 245 hypothetical protein YP_001944189.1 2424323 R 290315 CDS YP_001944190.1 189347661 6355981 complement(2427008..2428180) 1 NC_010803.1 KEGG: cph:Cpha266_2375 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 2428180 6355981 Clim_2187 Chlorobium limicola DSM 245 oxygen-independent coproporphyrinogen III oxidase YP_001944190.1 2427008 R 290315 CDS YP_001944191.1 189347662 6355982 complement(2428173..2428757) 1 NC_010803.1 TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Polynucleotide kinase 3 phosphatase central region; KEGG: cph:Cpha266_2376 histidinol-phosphate phosphatase family protein; histidinol-phosphate phosphatase family protein 2428757 6355982 Clim_2188 Chlorobium limicola DSM 245 histidinol-phosphate phosphatase family protein YP_001944191.1 2428173 R 290315 CDS YP_001944192.1 189347663 6355983 complement(2428763..2430232) 1 NC_010803.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 2430232 6355983 Clim_2189 Chlorobium limicola DSM 245 glycogen synthase YP_001944192.1 2428763 R 290315 CDS YP_001944193.1 189347664 6355984 2430398..2431444 1 NC_010803.1 KEGG: cph:Cpha266_2378 hypothetical protein; hypothetical protein 2431444 6355984 Clim_2190 Chlorobium limicola DSM 245 hypothetical protein YP_001944193.1 2430398 D 290315 CDS YP_001944194.1 189347665 6355985 2431532..2432104 1 NC_010803.1 TIGRFAM: bacteriochlorophyll 4-vinyl reductase; KEGG: cph:Cpha266_2379 bacteriochlorophyll 4-vinyl reductase; bacteriochlorophyll 4-vinyl reductase 2432104 6355985 Clim_2191 Chlorobium limicola DSM 245 bacteriochlorophyll 4-vinyl reductase YP_001944194.1 2431532 D 290315 CDS YP_001944195.1 189347666 6355986 complement(2432201..2433028) 1 NC_010803.1 light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production; protochlorophyllide reductase iron-sulfur ATP-binding protein 2433028 chlL 6355986 chlL Chlorobium limicola DSM 245 protochlorophyllide reductase iron-sulfur ATP-binding protein YP_001944195.1 2432201 R 290315 CDS YP_001944196.1 189347667 6355987 complement(2433064..2434671) 1 NC_010803.1 light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit B 2434671 6355987 Clim_2193 Chlorobium limicola DSM 245 light-independent protochlorophyllide reductase subunit B YP_001944196.1 2433064 R 290315 CDS YP_001944197.1 189347668 6355988 complement(2434711..2435973) 1 NC_010803.1 light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit N 2435973 6355988 Clim_2194 Chlorobium limicola DSM 245 light-independent protochlorophyllide reductase subunit N YP_001944197.1 2434711 R 290315 CDS YP_001944198.1 189347669 6355989 complement(2436102..2436407) 1 NC_010803.1 PFAM: protein of unknown function DUF77; KEGG: cph:Cpha266_2389 protein of unknown function DUF77; hypothetical protein 2436407 6355989 Clim_2195 Chlorobium limicola DSM 245 hypothetical protein YP_001944198.1 2436102 R 290315 CDS YP_001944199.1 189347670 6355990 complement(2436428..2437732) 1 NC_010803.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 2437732 6355990 Clim_2196 Chlorobium limicola DSM 245 adenylosuccinate synthetase YP_001944199.1 2436428 R 290315 CDS YP_001944200.1 189347671 6355991 complement(2437744..2438322) 1 NC_010803.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 2438322 engB 6355991 engB Chlorobium limicola DSM 245 ribosome biogenesis GTP-binding protein YsxC YP_001944200.1 2437744 R 290315 CDS YP_001944201.1 189347672 6355992 2438481..2439935 1 NC_010803.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 2439935 cysS 6355992 cysS Chlorobium limicola DSM 245 cysteinyl-tRNA synthetase YP_001944201.1 2438481 D 290315 CDS YP_001944202.1 189347673 6355993 complement(2439979..2441088) 1 NC_010803.1 PFAM: Nucleotidyl transferase; KEGG: cph:Cpha266_2393 mannose-1-phosphate guanylyltransferase (GDP); mannose-1-phosphate guanylyltransferase 2441088 6355993 Clim_2199 Chlorobium limicola DSM 245 mannose-1-phosphate guanylyltransferase YP_001944202.1 2439979 R 290315 CDS YP_001944203.1 189347674 6355994 2441226..2441888 1 NC_010803.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 2441888 gidB 6355994 gidB Chlorobium limicola DSM 245 16S rRNA methyltransferase GidB YP_001944203.1 2441226 D 290315 CDS YP_001944204.1 189347675 6355995 complement(2441952..2442407) 1 NC_010803.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 2442407 rplQ 6355995 rplQ Chlorobium limicola DSM 245 50S ribosomal protein L17 YP_001944204.1 2441952 R 290315 CDS YP_001944205.1 189347676 6355996 complement(2442455..2443441) 1 NC_010803.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 2443441 6355996 Clim_2202 Chlorobium limicola DSM 245 DNA-directed RNA polymerase subunit alpha YP_001944205.1 2442455 R 290315 CDS YP_001944206.1 189347677 6355997 complement(2443471..2444082) 1 NC_010803.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 2444082 rpsD 6355997 rpsD Chlorobium limicola DSM 245 30S ribosomal protein S4 YP_001944206.1 2443471 R 290315 CDS YP_001944207.1 189347678 6355145 complement(2444120..2444503) 1 NC_010803.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 2444503 6355145 Clim_2204 Chlorobium limicola DSM 245 30S ribosomal protein S11 YP_001944207.1 2444120 R 290315 CDS YP_001944208.1 189347679 6355227 complement(2444547..2444924) 1 NC_010803.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 2444924 rpsM 6355227 rpsM Chlorobium limicola DSM 245 30S ribosomal protein S13 YP_001944208.1 2444547 R 290315 CDS YP_001944209.1 189347680 6355228 complement(2444960..2445076) 1 NC_010803.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 2445076 rpmJ 6355228 rpmJ Chlorobium limicola DSM 245 50S ribosomal protein L36 YP_001944209.1 2444960 R 290315 CDS YP_001944210.1 189347681 6355229 complement(2445190..2445408) 1 NC_010803.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 2445408 infA 6355229 infA Chlorobium limicola DSM 245 translation initiation factor IF-1 YP_001944210.1 2445190 R 290315 CDS YP_001944211.1 189347682 6355230 complement(2445448..2446245) 1 NC_010803.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: cph:Cpha266_2402 methionine aminopeptidase, type I; methionine aminopeptidase 2446245 6355230 Clim_2208 Chlorobium limicola DSM 245 methionine aminopeptidase YP_001944211.1 2445448 R 290315 CDS YP_001944212.1 189347683 6355231 complement(2446256..2447587) 1 NC_010803.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 2447587 secY 6355231 secY Chlorobium limicola DSM 245 preprotein translocase subunit SecY YP_001944212.1 2446256 R 290315 CDS YP_001944213.1 189347684 6355232 complement(2447606..2448169) 1 NC_010803.1 late assembly protein; 50S ribosomal protein L15 2448169 rplO 6355232 rplO Chlorobium limicola DSM 245 50S ribosomal protein L15 YP_001944213.1 2447606 R 290315 CDS YP_001944214.1 189347685 6355233 complement(2448202..2448387) 1 NC_010803.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 2448387 rpmD 6355233 rpmD Chlorobium limicola DSM 245 50S ribosomal protein L30 YP_001944214.1 2448202 R 290315 CDS YP_001944215.1 189347686 6355234 complement(2448407..2448925) 1 NC_010803.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 2448925 rpsE 6355234 rpsE Chlorobium limicola DSM 245 30S ribosomal protein S5 YP_001944215.1 2448407 R 290315 CDS YP_001944216.1 189347687 6355235 complement(2448948..2449307) 1 NC_010803.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 2449307 rplR 6355235 rplR Chlorobium limicola DSM 245 50S ribosomal protein L18 YP_001944216.1 2448948 R 290315 CDS YP_001944217.1 189347688 6355236 complement(2449363..2449902) 1 NC_010803.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 2449902 rplF 6355236 rplF Chlorobium limicola DSM 245 50S ribosomal protein L6 YP_001944217.1 2449363 R 290315 CDS YP_001944218.1 189347689 6355237 complement(2449931..2450326) 1 NC_010803.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 2450326 rpsH 6355237 rpsH Chlorobium limicola DSM 245 30S ribosomal protein S8 YP_001944218.1 2449931 R 290315 CDS YP_001944219.1 189347690 6355238 complement(2450391..2450660) 1 NC_010803.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 2450660 rpsN 6355238 rpsN Chlorobium limicola DSM 245 30S ribosomal protein S14 YP_001944219.1 2450391 R 290315 CDS YP_001944220.1 189347691 6355239 complement(2450679..2451266) 1 NC_010803.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 2451266 rplE 6355239 rplE Chlorobium limicola DSM 245 50S ribosomal protein L5 YP_001944220.1 2450679 R 290315 CDS YP_001944221.1 189347692 6355240 complement(2451323..2451565) 1 NC_010803.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 2451565 rplX 6355240 rplX Chlorobium limicola DSM 245 50S ribosomal protein L24 YP_001944221.1 2451323 R 290315 CDS YP_001944222.1 189347693 6355242 complement(2451681..2452049) 1 NC_010803.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 2452049 rplN 6355242 rplN Chlorobium limicola DSM 245 50S ribosomal protein L14 YP_001944222.1 2451681 R 290315 CDS YP_001944223.1 189347694 6355243 complement(2452086..2452385) 1 NC_010803.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 2452385 rpsQ 6355243 rpsQ Chlorobium limicola DSM 245 30S ribosomal protein S17 YP_001944223.1 2452086 R 290315 CDS YP_001944224.1 189347695 6355244 complement(2452415..2452621) 1 NC_010803.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 2452621 6355244 Clim_2221 Chlorobium limicola DSM 245 50S ribosomal protein L29 YP_001944224.1 2452415 R 290315 CDS YP_001944225.1 189347696 6355245 complement(2452655..2453074) 1 NC_010803.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 2453074 rplP 6355245 rplP Chlorobium limicola DSM 245 50S ribosomal protein L16 YP_001944225.1 2452655 R 290315 CDS YP_001944226.1 189347697 6355246 complement(2453117..2453872) 1 NC_010803.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 2453872 rpsC 6355246 rpsC Chlorobium limicola DSM 245 30S ribosomal protein S3 YP_001944226.1 2453117 R 290315 CDS YP_001944227.1 189347698 6355247 complement(2453893..2454249) 1 NC_010803.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 2454249 rplV 6355247 rplV Chlorobium limicola DSM 245 50S ribosomal protein L22 YP_001944227.1 2453893 R 290315 CDS YP_001944228.1 189347699 6355248 complement(2454278..2454574) 1 NC_010803.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 2454574 rpsS 6355248 rpsS Chlorobium limicola DSM 245 30S ribosomal protein S19 YP_001944228.1 2454278 R 290315 CDS YP_001944229.1 189347700 6355249 complement(2454608..2455402) 1 NC_010803.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 2455402 rplB 6355249 rplB Chlorobium limicola DSM 245 50S ribosomal protein L2 YP_001944229.1 2454608 R 290315 CDS YP_001944230.1 189347701 6355250 complement(2455478..2455789) 1 NC_010803.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 2455789 rplW 6355250 rplW Chlorobium limicola DSM 245 50S ribosomal protein L23 YP_001944230.1 2455478 R 290315 CDS YP_001944231.1 189347702 6355251 complement(2455822..2456448) 1 NC_010803.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 2456448 rplD 6355251 rplD Chlorobium limicola DSM 245 50S ribosomal protein L4 YP_001944231.1 2455822 R 290315 CDS YP_001944232.1 189347703 6355252 complement(2456468..2457097) 1 NC_010803.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 2457097 rplC 6355252 rplC Chlorobium limicola DSM 245 50S ribosomal protein L3 YP_001944232.1 2456468 R 290315 CDS YP_001944233.1 189347704 6355253 complement(2457121..2457432) 1 NC_010803.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 2457432 rpsJ 6355253 rpsJ Chlorobium limicola DSM 245 30S ribosomal protein S10 YP_001944233.1 2457121 R 290315 CDS YP_001944234.1 189347705 6355254 complement(2457514..2458695) 1 NC_010803.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 2458695 6355254 Clim_2231 Chlorobium limicola DSM 245 elongation factor Tu YP_001944234.1 2457514 R 290315 CDS YP_001944235.1 189347706 6355255 complement(2458764..2460878) 1 NC_010803.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 2460878 6355255 Clim_2232 Chlorobium limicola DSM 245 elongation factor G YP_001944235.1 2458764 R 290315 CDS YP_001944236.1 189347707 6355256 complement(2460921..2461388) 1 NC_010803.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 2461388 6355256 Clim_2233 Chlorobium limicola DSM 245 30S ribosomal protein S7 YP_001944236.1 2460921 R 290315 CDS YP_001944237.1 189347708 6355257 complement(2461415..2461822) 1 NC_010803.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 2461822 rpsL 6355257 rpsL Chlorobium limicola DSM 245 30S ribosomal protein S12 YP_001944237.1 2461415 R 290315 CDS YP_001944238.1 189347709 6355258 complement(2462006..2463286) 1 NC_010803.1 KEGG: cph:Cpha266_2429 hypothetical protein; hypothetical protein 2463286 6355258 Clim_2235 Chlorobium limicola DSM 245 hypothetical protein YP_001944238.1 2462006 R 290315 CDS YP_001944239.1 189347710 6355259 complement(2463662..2464480) 1 NC_010803.1 PFAM: acid phosphatase (Class B); KEGG: cph:Cpha266_1069 acid phosphatase (class B); acid phosphatase (Class B) 2464480 6355259 Clim_2236 Chlorobium limicola DSM 245 acid phosphatase (Class B) YP_001944239.1 2463662 R 290315 CDS YP_001944240.1 189347711 6355260 2464666..2465583 1 NC_010803.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: cph:Cpha266_1679 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein 2465583 6355260 Clim_2237 Chlorobium limicola DSM 245 NmrA family protein YP_001944240.1 2464666 D 290315 CDS YP_001944241.1 189347712 6355261 2465700..2466755 1 NC_010803.1 PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; KEGG: cte:CT1470 rod shape-determining protein MreB; rod shape-determining protein MreB 2466755 6355261 Clim_2238 Chlorobium limicola DSM 245 rod shape-determining protein MreB YP_001944241.1 2465700 D 290315 CDS YP_001944242.1 189347713 6355262 complement(2466790..2467128) 1 NC_010803.1 TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: plt:Plut_1478 PhnA protein; alkylphosphonate utilization operon protein PhnA 2467128 6355262 Clim_2239 Chlorobium limicola DSM 245 alkylphosphonate utilization operon protein PhnA YP_001944242.1 2466790 R 290315 CDS YP_001944243.1 189347714 6355263 complement(2467204..2468274) 1 NC_010803.1 PFAM: GTPase EngC; KEGG: cph:Cpha266_1597 GTPase EngC; GTPase EngC 2468274 6355263 Clim_2240 Chlorobium limicola DSM 245 GTPase EngC YP_001944243.1 2467204 R 290315 CDS YP_001944244.1 189347715 6355264 complement(2468450..2468875) 1 NC_010803.1 KEGG: lin:lin2171 hypothetical protein; hypothetical protein 2468875 6355264 Clim_2241 Chlorobium limicola DSM 245 hypothetical protein YP_001944244.1 2468450 R 290315 CDS YP_001944245.1 189347716 6355265 complement(2469317..2469913) 1 NC_010803.1 TIGRFAM: mobile mystery protein B; PFAM: filamentation induced by cAMP protein Fic; KEGG: gsu:GSU1391 Fic family protein; mobile mystery protein B 2469913 6355265 Clim_2242 Chlorobium limicola DSM 245 mobile mystery protein B YP_001944245.1 2469317 R 290315 CDS YP_001944246.1 189347717 6355266 complement(2469904..2470362) 1 NC_010803.1 TIGRFAM: mobile mystery protein A; PFAM: helix-turn-helix domain protein; KEGG: plt:Plut_1905 XRE family transcriptional regulator; mobile mystery protein A 2470362 6355266 Clim_2243 Chlorobium limicola DSM 245 mobile mystery protein A YP_001944246.1 2469904 R 290315 CDS YP_001944247.1 189347718 6355267 complement(2470903..2471322) 1 NC_010803.1 KEGG: cph:Cpha266_1473 hypothetical protein; hypothetical protein 2471322 6355267 Clim_2244 Chlorobium limicola DSM 245 hypothetical protein YP_001944247.1 2470903 R 290315 CDS YP_001944248.1 189347719 6355268 complement(2471319..2472452) 1 NC_010803.1 KEGG: cph:Cpha266_1474 hypothetical protein; hypothetical protein 2472452 6355268 Clim_2245 Chlorobium limicola DSM 245 hypothetical protein YP_001944248.1 2471319 R 290315 CDS YP_001944249.1 189347720 6355269 complement(2472619..2473185) 1 NC_010803.1 PFAM: nitroreductase; KEGG: cph:Cpha266_1469 nitroreductase; nitroreductase 2473185 6355269 Clim_2246 Chlorobium limicola DSM 245 nitroreductase YP_001944249.1 2472619 R 290315 CDS YP_001944250.1 189347721 6355270 complement(2473201..2473833) 1 NC_010803.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pvi:Cvib_1055 methyltransferase type 12; type 11 methyltransferase 2473833 6355270 Clim_2247 Chlorobium limicola DSM 245 type 11 methyltransferase YP_001944250.1 2473201 R 290315 CDS YP_001944251.1 189347722 6355271 complement(2473849..2474265) 1 NC_010803.1 PFAM: thioesterase superfamily protein; KEGG: cph:Cpha266_1470 uncharacterized domain 1; thioesterase superfamily protein 2474265 6355271 Clim_2248 Chlorobium limicola DSM 245 thioesterase superfamily protein YP_001944251.1 2473849 R 290315 CDS YP_001944252.1 189347723 6355272 complement(2474554..2475096) 1 NC_010803.1 hypothetical protein 2475096 6355272 Clim_2249 Chlorobium limicola DSM 245 hypothetical protein YP_001944252.1 2474554 R 290315 CDS YP_001944253.1 189347724 6355273 complement(2475298..2476182) 1 NC_010803.1 PFAM: Lytic transglycosylase catalytic; KEGG: bfr:BF3910 phage-related protein; lytic transglycosylase 2476182 6355273 Clim_2250 Chlorobium limicola DSM 245 lytic transglycosylase YP_001944253.1 2475298 R 290315 CDS YP_001944254.1 189347725 6355274 complement(2476446..2477246) 1 NC_010803.1 KEGG: cph:Cpha266_1471 hypothetical protein; hypothetical protein 2477246 6355274 Clim_2251 Chlorobium limicola DSM 245 hypothetical protein YP_001944254.1 2476446 R 290315 CDS YP_001944255.1 189347726 6355275 2477265..2477492 1 NC_010803.1 hypothetical protein 2477492 6355275 Clim_2252 Chlorobium limicola DSM 245 hypothetical protein YP_001944255.1 2477265 D 290315 CDS YP_001944256.1 189347727 6355276 2477510..2478529 1 NC_010803.1 KEGG: cph:Cpha266_1472 hypothetical protein; hypothetical protein 2478529 6355276 Clim_2253 Chlorobium limicola DSM 245 hypothetical protein YP_001944256.1 2477510 D 290315 CDS YP_001944257.1 189347728 6355277 complement(2478732..2479439) 1 NC_010803.1 KEGG: aci:ACIAD1306 conserved hypothetical protein; signal peptide; hypothetical protein 2479439 6355277 Clim_2254 Chlorobium limicola DSM 245 hypothetical protein YP_001944257.1 2478732 R 290315 CDS YP_001944258.1 189347729 6355279 complement(2480100..2480369) 1 NC_010803.1 KEGG: cph:Cpha266_1475 hypothetical protein; hypothetical protein 2480369 6355279 Clim_2256 Chlorobium limicola DSM 245 hypothetical protein YP_001944258.1 2480100 R 290315 CDS YP_001944259.1 189347730 6355280 complement(2480457..2481269) 1 NC_010803.1 KEGG: mxa:MXAN_6313 lipoprotein; poly(3-hydroxybutyrate) depolymerase-like protein 2481269 6355280 Clim_2257 Chlorobium limicola DSM 245 poly(3-hydroxybutyrate) depolymerase-like protein YP_001944259.1 2480457 R 290315 CDS YP_001944260.1 189347731 6355281 2481590..2482606 1 NC_010803.1 PFAM: regulatory protein ArsR; KEGG: cph:Cpha266_1489 regulatory protein, ArsR; ArsR family transcriptional regulator 2482606 6355281 Clim_2258 Chlorobium limicola DSM 245 ArsR family transcriptional regulator YP_001944260.1 2481590 D 290315 CDS YP_001944261.1 189347732 6355282 complement(2482599..2482829) 1 NC_010803.1 KEGG: psb:Psyr_0104 hypothetical protein; hypothetical protein 2482829 6355282 Clim_2259 Chlorobium limicola DSM 245 hypothetical protein YP_001944261.1 2482599 R 290315 CDS YP_001944262.1 189347733 6355283 complement(2482994..2486689) 1 NC_010803.1 KEGG: ses:SARI_03320 hypothetical protein; hypothetical protein 2486689 6355283 Clim_2260 Chlorobium limicola DSM 245 hypothetical protein YP_001944262.1 2482994 R 290315 CDS YP_001944263.1 189347734 6355284 2486790..2488157 1 NC_010803.1 PFAM: transposase IS4 family protein; KEGG: cph:Cpha266_2634 transposase, IS4 family protein; transposase IS4 family protein 2488157 6355284 Clim_2261 Chlorobium limicola DSM 245 transposase IS4 family protein YP_001944263.1 2486790 D 290315 CDS YP_001944264.1 189347735 6355285 complement(2488295..2488885) 1 NC_010803.1 KEGG: kpn:KPN_02945 hypothetical protein; hypothetical protein 2488885 6355285 Clim_2262 Chlorobium limicola DSM 245 hypothetical protein YP_001944264.1 2488295 R 290315 CDS YP_001944265.1 189347736 6355286 complement(2489065..2489781) 1 NC_010803.1 KEGG: fnu:FN1319 DNA primase; hypothetical protein 2489781 6355286 Clim_2263 Chlorobium limicola DSM 245 hypothetical protein YP_001944265.1 2489065 R 290315 CDS YP_001944266.1 189347737 6355287 complement(2489978..2490817) 1 NC_010803.1 KEGG: hch:HCH_03582 hypothetical protein; hypothetical protein 2490817 6355287 Clim_2264 Chlorobium limicola DSM 245 hypothetical protein YP_001944266.1 2489978 R 290315 CDS YP_001944267.1 189347738 6355288 complement(2490993..2491973) 1 NC_010803.1 hypothetical protein 2491973 6355288 Clim_2265 Chlorobium limicola DSM 245 hypothetical protein YP_001944267.1 2490993 R 290315 CDS YP_001944268.1 189347739 6355289 2492157..2492276 1 NC_010803.1 hypothetical protein 2492276 6355289 Clim_2266 Chlorobium limicola DSM 245 hypothetical protein YP_001944268.1 2492157 D 290315 CDS YP_001944269.1 189347740 6355290 complement(2492473..2493318) 1 NC_010803.1 KEGG: cte:CT1692 hypothetical protein; hypothetical protein 2493318 6355290 Clim_2267 Chlorobium limicola DSM 245 hypothetical protein YP_001944269.1 2492473 R 290315 CDS YP_001944270.1 189347741 6355291 complement(2493728..2494156) 1 NC_010803.1 KEGG: cph:Cpha266_1501 hypothetical protein; hypothetical protein 2494156 6355291 Clim_2268 Chlorobium limicola DSM 245 hypothetical protein YP_001944270.1 2493728 R 290315 CDS YP_001944271.1 189347742 6355292 complement(2494456..2496126) 1 NC_010803.1 KEGG: pca:Pcar_2730 ATP-dependent DNA helicase; transcriptional regulator 2496126 6355292 Clim_2269 Chlorobium limicola DSM 245 transcriptional regulator YP_001944271.1 2494456 R 290315 CDS YP_001944272.1 189347743 6355293 complement(2496212..2496445) 1 NC_010803.1 KEGG: bja:bll8207 hypothetical protein; hypothetical protein 2496445 6355293 Clim_2270 Chlorobium limicola DSM 245 hypothetical protein YP_001944272.1 2496212 R 290315 CDS YP_001944273.1 189347744 6355294 complement(2496591..2497409) 1 NC_010803.1 PFAM: Hemolysin-type calcium-binding region; KEGG: bpl:BURPS1106A_2063 type I secretion target repeat protein; hemolysin-type calcium-binding protein 2497409 6355294 Clim_2271 Chlorobium limicola DSM 245 hemolysin-type calcium-binding protein YP_001944273.1 2496591 R 290315 CDS YP_001944274.1 189347745 6355295 2497545..2498912 1 NC_010803.1 PFAM: transposase IS4 family protein; KEGG: cph:Cpha266_2634 transposase, IS4 family protein; transposase IS4 family protein 2498912 6355295 Clim_2272 Chlorobium limicola DSM 245 transposase IS4 family protein YP_001944274.1 2497545 D 290315 CDS YP_001944275.1 189347746 6355296 complement(2499027..2504510) 1 NC_010803.1 PFAM: Hemolysin-type calcium-binding region; lipase class 3; FG-GAP repeat protein; SMART: Integrin alpha beta-propellor repeat protein; KEGG: gvi:glr1840 hypothetical protein; FG-GAP repeat-containing protein 2504510 6355296 Clim_2273 Chlorobium limicola DSM 245 FG-GAP repeat-containing protein YP_001944275.1 2499027 R 290315 CDS YP_001944276.1 189347747 6355297 2505063..2506442 1 NC_010803.1 PFAM: outer membrane efflux protein; KEGG: prw:PsycPRwf_0759 outer membrane efflux protein; outer membrane efflux protein 2506442 6355297 Clim_2274 Chlorobium limicola DSM 245 outer membrane efflux protein YP_001944276.1 2505063 D 290315 CDS YP_001944277.1 189347748 6355298 2506528..2508672 1 NC_010803.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: prw:PsycPRwf_0760 ABC transporter; ABC transporter 2508672 6355298 Clim_2275 Chlorobium limicola DSM 245 ABC transporter YP_001944277.1 2506528 D 290315 CDS YP_001944278.1 189347749 6355299 2508665..2509834 1 NC_010803.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: prw:PsycPRwf_0761 type I secretion membrane fusion protein, HlyD family; HlyD family type I secretion membrane fusion protein 2509834 6355299 Clim_2276 Chlorobium limicola DSM 245 HlyD family type I secretion membrane fusion protein YP_001944278.1 2508665 D 290315 CDS YP_001944279.1 189347750 6355300 complement(2509891..2512551) 1 NC_010803.1 KEGG: cph:Cpha266_2437 hypothetical protein; hypothetical protein 2512551 6355300 Clim_2277 Chlorobium limicola DSM 245 hypothetical protein YP_001944279.1 2509891 R 290315 CDS YP_001944280.1 189347751 6355301 complement(2512749..2514299) 1 NC_010803.1 PFAM: polysaccharide biosynthesis protein; KEGG: cph:Cpha266_2438 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 2514299 6355301 Clim_2278 Chlorobium limicola DSM 245 polysaccharide biosynthesis protein YP_001944280.1 2512749 R 290315 CDS YP_001944281.1 189347752 6355302 complement(2514296..2515444) 1 NC_010803.1 KEGG: cph:Cpha266_2439 glycosyl transferase, group 1; group 1 glycosyl transferase 2515444 6355302 Clim_2279 Chlorobium limicola DSM 245 group 1 glycosyl transferase YP_001944281.1 2514296 R 290315 CDS YP_001944282.1 189347753 6355303 complement(2515452..2516021) 1 NC_010803.1 KEGG: cph:Cpha266_2440 hypothetical protein; hypothetical protein 2516021 6355303 Clim_2280 Chlorobium limicola DSM 245 hypothetical protein YP_001944282.1 2515452 R 290315 CDS YP_001944283.1 189347754 6355304 complement(2516018..2516866) 1 NC_010803.1 PFAM: glycosyl transferase family 2; KEGG: cph:Cpha266_2441 glycosyl transferase, family 2; family 2 glycosyl transferase 2516866 6355304 Clim_2281 Chlorobium limicola DSM 245 family 2 glycosyl transferase YP_001944283.1 2516018 R 290315 CDS YP_001944284.1 189347755 6355305 complement(2516863..2518008) 1 NC_010803.1 PFAM: glycosyl transferase group 1; KEGG: cph:Cpha266_2442 glycosyl transferase, group 1; group 1 glycosyl transferase 2518008 6355305 Clim_2282 Chlorobium limicola DSM 245 group 1 glycosyl transferase YP_001944284.1 2516863 R 290315 CDS YP_001944285.1 189347756 6355306 complement(2518042..2518308) 1 NC_010803.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: cph:Cpha266_2443 phosphotransferase system, phosphocarrier protein HPr; phosphotransferase system, phosphocarrier protein HPr 2518308 6355306 Clim_2283 Chlorobium limicola DSM 245 phosphotransferase system, phosphocarrier protein HPr YP_001944285.1 2518042 R 290315 CDS YP_001944286.1 189347757 6355307 complement(2518356..2518829) 1 NC_010803.1 catalyzes the formation of N-acetyl-L-glutamate from acetyl-CoA and L-glutamate; acetyltransferase 2518829 6355307 Clim_2284 Chlorobium limicola DSM 245 acetyltransferase YP_001944286.1 2518356 R 290315 CDS YP_001944287.1 189347758 6355630 complement(2518826..2519842) 1 NC_010803.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 2519842 obgE 6355630 obgE Chlorobium limicola DSM 245 GTPase ObgE YP_001944287.1 2518826 R 290315 CDS YP_001944288.1 189347759 6355631 2519974..2520240 1 NC_010803.1 PFAM: Exonuclease VII small subunit; KEGG: cph:Cpha266_2446 exodeoxyribonuclease VII small subunit; Exonuclease VII small subunit 2520240 6355631 Clim_2286 Chlorobium limicola DSM 245 Exonuclease VII small subunit YP_001944288.1 2519974 D 290315 CDS YP_001944289.1 189347760 6355632 complement(2520255..2521682) 1 NC_010803.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 2521682 gatB 6355632 gatB Chlorobium limicola DSM 245 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_001944289.1 2520255 R 290315 CDS YP_001944290.1 189347761 6355633 complement(2521746..2522339) 1 NC_010803.1 KEGG: cph:Cpha266_2448 hypothetical protein; hypothetical protein 2522339 6355633 Clim_2288 Chlorobium limicola DSM 245 hypothetical protein YP_001944290.1 2521746 R 290315 CDS YP_001944291.1 189347762 6355634 complement(2522573..2523898) 1 NC_010803.1 PFAM: ATPase AAA; Clp domain protein; SMART: AAA ATPase; KEGG: cph:Cpha266_2449 AAA ATPase, central domain protein; ATPase AAA 2523898 6355634 Clim_2289 Chlorobium limicola DSM 245 ATPase AAA YP_001944291.1 2522573 R 290315 CDS YP_001944292.1 189347763 6355635 complement(2524235..2524534) 1 NC_010803.1 KEGG: cph:Cpha266_2450 hypothetical protein; hypothetical protein 2524534 6355635 Clim_2290 Chlorobium limicola DSM 245 hypothetical protein YP_001944292.1 2524235 R 290315 CDS YP_001944293.1 189347764 6355636 complement(2524664..2525686) 1 NC_010803.1 PFAM: von Willebrand factor type A; KEGG: cph:Cpha266_2451 von Willebrand factor, type A; von Willebrand factor type A 2525686 6355636 Clim_2291 Chlorobium limicola DSM 245 von Willebrand factor type A YP_001944293.1 2524664 R 290315 CDS YP_001944294.1 189347765 6355637 complement(2525729..2526706) 1 NC_010803.1 PFAM: von Willebrand factor type A; KEGG: cph:Cpha266_2452 von Willebrand factor, type A; von Willebrand factor type A 2526706 6355637 Clim_2292 Chlorobium limicola DSM 245 von Willebrand factor type A YP_001944294.1 2525729 R 290315 CDS YP_001944295.1 189347766 6355638 complement(2526712..2527656) 1 NC_010803.1 KEGG: cph:Cpha266_2453 hypothetical protein; hypothetical protein 2527656 6355638 Clim_2293 Chlorobium limicola DSM 245 hypothetical protein YP_001944295.1 2526712 R 290315 CDS YP_001944296.1 189347767 6355639 complement(2527640..2528533) 1 NC_010803.1 PFAM: protein of unknown function DUF58; SMART: von Willebrand factor type A; KEGG: cph:Cpha266_2454 protein of unknown function DUF58; hypothetical protein 2528533 6355639 Clim_2294 Chlorobium limicola DSM 245 hypothetical protein YP_001944296.1 2527640 R 290315 CDS YP_001944297.1 189347768 6355640 complement(2528628..2529626) 1 NC_010803.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: cph:Cpha266_2455 ATPase associated with various cellular activities, AAA_3; ATPase 2529626 6355640 Clim_2295 Chlorobium limicola DSM 245 ATPase YP_001944297.1 2528628 R 290315 CDS YP_001944298.1 189347769 6355641 complement(2529693..2529920) 1 NC_010803.1 KEGG: cph:Cpha266_2456 hypothetical protein; hypothetical protein 2529920 6355641 Clim_2296 Chlorobium limicola DSM 245 hypothetical protein YP_001944298.1 2529693 R 290315 CDS YP_001944299.1 189347770 6355642 2529945..2531006 1 NC_010803.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 2531006 6355642 Clim_2297 Chlorobium limicola DSM 245 DNA-binding/iron metalloprotein/AP endonuclease YP_001944299.1 2529945 D 290315 CDS YP_001944300.1 189347771 6355643 2531089..2531445 1 NC_010803.1 TIGRFAM: preprotein translocase subunit YajC; PFAM: YajC family protein; KEGG: cph:Cpha266_2458 protein translocase subunit YajC; preprotein translocase subunit YajC 2531445 6355643 Clim_2298 Chlorobium limicola DSM 245 preprotein translocase subunit YajC YP_001944300.1 2531089 D 290315 CDS YP_001944301.1 189347772 6355644 2531455..2532564 1 NC_010803.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 2532564 6355644 Clim_2299 Chlorobium limicola DSM 245 carbamoyl phosphate synthase small subunit YP_001944301.1 2531455 D 290315 CDS YP_001944302.1 189347773 6355645 2532608..2533747 1 NC_010803.1 PFAM: aminotransferase class V; KEGG: cph:Cpha266_2460 serine--glyoxylate transaminase; serine--glyoxylate transaminase 2533747 6355645 Clim_2300 Chlorobium limicola DSM 245 serine--glyoxylate transaminase YP_001944302.1 2532608 D 290315 CDS YP_001944303.1 189347774 6355646 2533890..2534555 1 NC_010803.1 KEGG: cph:Cpha266_2461 hypothetical protein; hypothetical protein 2534555 6355646 Clim_2301 Chlorobium limicola DSM 245 hypothetical protein YP_001944303.1 2533890 D 290315 CDS YP_001944304.1 189347775 6355647 2534562..2535977 1 NC_010803.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cph:Cpha266_2462 radical SAM domain protein; radical SAM protein 2535977 6355647 Clim_2302 Chlorobium limicola DSM 245 radical SAM protein YP_001944304.1 2534562 D 290315 CDS YP_001944305.1 189347776 6355648 2536080..2536511 1 NC_010803.1 PFAM: cytochrome c class I; KEGG: cph:Cpha266_2463 cytochrome c, class I; cytochrome c class I 2536511 6355648 Clim_2303 Chlorobium limicola DSM 245 cytochrome c class I YP_001944305.1 2536080 D 290315 CDS YP_001944306.1 189347777 6355649 2536734..2537057 1 NC_010803.1 PFAM: cytochrome c class I; KEGG: cph:Cpha266_2464 cytochrome c, class I; cytochrome c class I 2537057 6355649 Clim_2304 Chlorobium limicola DSM 245 cytochrome c class I YP_001944306.1 2536734 D 290315 CDS YP_001944307.1 189347778 6355650 2537242..2537502 1 NC_010803.1 KEGG: cph:Cpha266_2465 MtN3 and saliva related transmembrane protein; MtN3 and saliva related transmembrane protein 2537502 6355650 Clim_2305 Chlorobium limicola DSM 245 MtN3 and saliva related transmembrane protein YP_001944307.1 2537242 D 290315 CDS YP_001944308.1 189347779 6355651 2537612..2538412 1 NC_010803.1 KEGG: cph:Cpha266_2466 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; pyrroline-5-carboxylate reductase 2538412 6355651 Clim_2306 Chlorobium limicola DSM 245 pyrroline-5-carboxylate reductase YP_001944308.1 2537612 D 290315 CDS YP_001944309.1 189347780 6355652 2538432..2539763 1 NC_010803.1 KEGG: cph:Cpha266_2467 hypothetical protein; hypothetical protein 2539763 6355652 Clim_2307 Chlorobium limicola DSM 245 hypothetical protein YP_001944309.1 2538432 D 290315 CDS YP_001944310.1 189347781 6355653 complement(2539785..2541020) 1 NC_010803.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: cph:Cpha266_2468 molybdopterin molybdochelatase; molybdenum cofactor synthesis domain-containing protein 2541020 6355653 Clim_2308 Chlorobium limicola DSM 245 molybdenum cofactor synthesis domain-containing protein YP_001944310.1 2539785 R 290315 CDS YP_001944311.1 189347782 6355654 complement(2541017..2541958) 1 NC_010803.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA 2541958 moaC 6355654 moaC Chlorobium limicola DSM 245 bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA YP_001944311.1 2541017 R 290315 CDS YP_001944312.1 189347783 6355655 complement(2541992..2542822) 1 NC_010803.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cph:Cpha266_2470 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 2542822 6355655 Clim_2310 Chlorobium limicola DSM 245 glycerophosphoryl diester phosphodiesterase YP_001944312.1 2541992 R 290315 CDS YP_001944313.1 189347784 6355656 complement(2542911..2543222) 1 NC_010803.1 KEGG: plt:Plut_0145 hypothetical protein; hypothetical protein 2543222 6355656 Clim_2311 Chlorobium limicola DSM 245 hypothetical protein YP_001944313.1 2542911 R 290315 CDS YP_001944314.1 189347785 6355657 2543440..2543610 1 NC_010803.1 KEGG: plt:Plut_0144 Ric1 protein; Ric1 protein 2543610 6355657 Clim_2312 Chlorobium limicola DSM 245 Ric1 protein YP_001944314.1 2543440 D 290315 CDS YP_001944315.1 189347786 6355658 2543790..2544902 1 NC_010803.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; MobB is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway; bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MobA 2544902 6355658 Clim_2313 Chlorobium limicola DSM 245 bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MobA YP_001944315.1 2543790 D 290315 CDS YP_001944316.1 189347787 6355659 2544912..2545373 1 NC_010803.1 PFAM: UspA domain protein; KEGG: pvi:Cvib_0209 UspA domain protein; UspA domain-containing protein 2545373 6355659 Clim_2314 Chlorobium limicola DSM 245 UspA domain-containing protein YP_001944316.1 2544912 D 290315 CDS YP_001944317.1 189347788 6355660 complement(2545348..2546166) 1 NC_010803.1 PFAM: transport system permease protein; ABC transporter; KEGG: cph:Cpha266_2474 ABC transporter; ABC transporter 2546166 6355660 Clim_2315 Chlorobium limicola DSM 245 ABC transporter YP_001944317.1 2545348 R 290315 CDS YP_001944318.1 189347789 6355661 complement(2546171..2546926) 1 NC_010803.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: cph:Cpha266_2475 ABC transporter; ABC transporter 2546926 6355661 Clim_2316 Chlorobium limicola DSM 245 ABC transporter YP_001944318.1 2546171 R 290315 CDS YP_001944319.1 189347790 6355662 complement(2546923..2547825) 1 NC_010803.1 PFAM: periplasmic solute binding protein; KEGG: cte:CT2106 adhesion protein; periplasmic solute binding protein 2547825 6355662 Clim_2317 Chlorobium limicola DSM 245 periplasmic solute binding protein YP_001944319.1 2546923 R 290315 CDS YP_001944320.1 189347791 6355663 complement(2547822..2548280) 1 NC_010803.1 PFAM: ferric-uptake regulator; KEGG: cph:Cpha266_2477 ferric uptake regulator, Fur family; Fur family ferric uptake regulator 2548280 6355663 Clim_2318 Chlorobium limicola DSM 245 Fur family ferric uptake regulator YP_001944320.1 2547822 R 290315 CDS YP_001944321.1 189347792 6355664 complement(2548353..2550041) 1 NC_010803.1 TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: cph:Cpha266_2478 2-isopropylmalate synthase; 2-isopropylmalate synthase 2550041 6355664 Clim_2319 Chlorobium limicola DSM 245 2-isopropylmalate synthase YP_001944321.1 2548353 R 290315 CDS YP_001944322.1 189347793 6355665 complement(2550392..2550889) 1 NC_010803.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: pvi:Cvib_0204 protein of unknown function DUF306, MetA and HslJ; hypothetical protein 2550889 6355665 Clim_2320 Chlorobium limicola DSM 245 hypothetical protein YP_001944322.1 2550392 R 290315 CDS YP_001944323.1 189347794 6355666 complement(2550977..2551714) 1 NC_010803.1 PFAM: ABC transporter; KEGG: mba:Mbar_A2485 hypothetical protein; ABC transporter 2551714 6355666 Clim_2321 Chlorobium limicola DSM 245 ABC transporter YP_001944323.1 2550977 R 290315 CDS YP_001944324.1 189347795 6355667 complement(2551711..2552697) 1 NC_010803.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mhu:Mhun_0242 daunorubicin resistance ABC transporter ATP-binding subunit; ABC transporter 2552697 6355667 Clim_2322 Chlorobium limicola DSM 245 ABC transporter YP_001944324.1 2551711 R 290315 CDS YP_001944325.1 189347796 6355668 complement(2552739..2552903) 1 NC_010803.1 KEGG: pca:Pcar_2840 hypothetical protein; hypothetical protein 2552903 6355668 Clim_2323 Chlorobium limicola DSM 245 hypothetical protein YP_001944325.1 2552739 R 290315 CDS YP_001944326.1 189347797 6355669 complement(2552968..2553252) 1 NC_010803.1 PFAM: regulatory protein ArsR; Helix-turn-helix type 11 domain protein; KEGG: pca:Pcar_2839 predicted metal-regulated homodimeric transcriptional regulator; ArsR family transcriptional regulator 2553252 6355669 Clim_2324 Chlorobium limicola DSM 245 ArsR family transcriptional regulator YP_001944326.1 2552968 R 290315 CDS YP_001944327.1 189347798 6355670 complement(2553349..2554302) 1 NC_010803.1 KEGG: cph:Cpha266_0169 hypothetical protein; hypothetical protein 2554302 6355670 Clim_2325 Chlorobium limicola DSM 245 hypothetical protein YP_001944327.1 2553349 R 290315 CDS YP_001944328.1 189347799 6355671 complement(2554347..2555258) 1 NC_010803.1 TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; KEGG: cch:Cag_0146 monofunctional biosynthetic peptidoglycan transglycosylase; monofunctional biosynthetic peptidoglycan transglycosylase 2555258 6355671 Clim_2326 Chlorobium limicola DSM 245 monofunctional biosynthetic peptidoglycan transglycosylase YP_001944328.1 2554347 R 290315 CDS YP_001944329.1 189347800 6355672 2555434..2555844 1 NC_010803.1 PFAM: cytochrome c class I; KEGG: cph:Cpha266_0171 C-type cytochrome; cytochrome c class I 2555844 6355672 Clim_2327 Chlorobium limicola DSM 245 cytochrome c class I YP_001944329.1 2555434 D 290315 CDS YP_001944330.1 189347801 6355674 complement(2556081..2557970) 1 NC_010803.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: cph:Cpha266_0172 DNA mismatch repair protein MutL; DNA mismatch repair protein MutL 2557970 6355674 Clim_2328 Chlorobium limicola DSM 245 DNA mismatch repair protein MutL YP_001944330.1 2556081 R 290315 CDS YP_001944331.1 189347802 6355675 complement(2558042..2559331) 1 NC_010803.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: cph:Cpha266_2541 competence/damage-inducible protein CinA; competence/damage-inducible protein CinA 2559331 6355675 Clim_2329 Chlorobium limicola DSM 245 competence/damage-inducible protein CinA YP_001944331.1 2558042 R 290315 CDS YP_001944332.1 189347803 6355676 complement(2559342..2561810) 1 NC_010803.1 multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I 2561810 thrA 6355676 thrA Chlorobium limicola DSM 245 bifunctional aspartokinase I/homoserine dehydrogenase I YP_001944332.1 2559342 R 290315 CDS YP_001944333.1 189347804 6355677 complement(2561989..2562864) 1 NC_010803.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 2562864 6355677 Clim_2331 Chlorobium limicola DSM 245 F0F1 ATP synthase subunit gamma YP_001944333.1 2561989 R 290315 CDS YP_001944334.1 189347805 6355678 complement(2562917..2564497) 1 NC_010803.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 2564497 6355678 Clim_2332 Chlorobium limicola DSM 245 F0F1 ATP synthase subunit alpha YP_001944334.1 2562917 R 290315 CDS YP_001944335.1 189347806 6355679 2564743..2565705 1 NC_010803.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 2565705 6355679 Clim_2333 Chlorobium limicola DSM 245 homoserine kinase YP_001944335.1 2564743 D 290315 CDS YP_001944336.1 189347807 6355680 2565730..2567043 1 NC_010803.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 2567043 6355680 Clim_2334 Chlorobium limicola DSM 245 threonine synthase YP_001944336.1 2565730 D 290315 CDS YP_001944337.1 189347808 6355681 2567062..2567778 1 NC_010803.1 KEGG: cph:Cpha266_2547 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 2567778 6355681 Clim_2335 Chlorobium limicola DSM 245 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_001944337.1 2567062 D 290315 CDS YP_001944338.1 189347809 6355682 complement(2567769..2568236) 1 NC_010803.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 2568236 ribH 6355682 ribH Chlorobium limicola DSM 245 6,7-dimethyl-8-ribityllumazine synthase YP_001944338.1 2567769 R 290315 CDS YP_001944339.1 189347810 6355683 complement(2568267..2568911) 1 NC_010803.1 TIGRFAM: phosphoheptose isomerase; KEGG: cph:Cpha266_2549 phosphoheptose isomerase; phosphoheptose isomerase 2568911 6355683 Clim_2337 Chlorobium limicola DSM 245 phosphoheptose isomerase YP_001944339.1 2568267 R 290315 CDS YP_001944340.1 189347811 6355684 2569101..2569934 1 NC_010803.1 PFAM: UspA domain protein; KEGG: cph:Cpha266_2551 UspA domain protein; UspA domain-containing protein 2569934 6355684 Clim_2338 Chlorobium limicola DSM 245 UspA domain-containing protein YP_001944340.1 2569101 D 290315 CDS YP_001944341.1 189347812 6355685 complement(2569954..2570784) 1 NC_010803.1 PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: pvi:Cvib_1634 ion transport protein; Ion transport protein 2570784 6355685 Clim_2339 Chlorobium limicola DSM 245 Ion transport protein YP_001944341.1 2569954 R 290315 CDS YP_001944342.1 189347813 6355686 2570811..2570990 1 NC_010803.1 hypothetical protein 2570990 6355686 Clim_2340 Chlorobium limicola DSM 245 hypothetical protein YP_001944342.1 2570811 D 290315 CDS YP_001944343.1 189347814 6355687 complement(2570962..2572017) 1 NC_010803.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 2572017 hemE 6355687 hemE Chlorobium limicola DSM 245 uroporphyrinogen decarboxylase YP_001944343.1 2570962 R 290315 CDS YP_001944344.1 189347815 6355688 complement(2572192..2573040) 1 NC_010803.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: cph:Cpha266_0175 succinate dehydrogenase subunit C; CoB--CoM heterodisulfide reductase 2573040 6355688 Clim_2342 Chlorobium limicola DSM 245 CoB--CoM heterodisulfide reductase YP_001944344.1 2572192 R 290315 CDS YP_001944345.1 189347816 6355689 complement(2573058..2574092) 1 NC_010803.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: cph:Cpha266_0176 succinate dehydrogenase subunit B; succinate dehydrogenase and fumarate reductase iron-sulfur protein 2574092 6355689 Clim_2343 Chlorobium limicola DSM 245 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_001944345.1 2573058 R 290315 CDS YP_001944346.1 189347817 6355690 complement(2574104..2575807) 1 NC_010803.1 KEGG: cph:Cpha266_0177 succinate dehydrogenase subunit A; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; succinate dehydrogenase or fumarate reductase, flavoprotein subunit 2575807 6355690 Clim_2344 Chlorobium limicola DSM 245 succinate dehydrogenase or fumarate reductase, flavoprotein subunit YP_001944346.1 2574104 R 290315 CDS YP_001944347.1 189347818 6355691 complement(2575930..2576376) 1 NC_010803.1 PFAM: CBS domain containing protein; KEGG: cch:Cag_0126 CBS; signal-transduction protein with CBS domains 2576376 6355691 Clim_2345 Chlorobium limicola DSM 245 signal-transduction protein with CBS domains YP_001944347.1 2575930 R 290315 CDS YP_001944348.1 189347819 6355692 complement(2576558..2577238) 1 NC_010803.1 PFAM: beta-lactamase domain protein; KEGG: cph:Cpha266_0179 beta-lactamase domain protein; beta-lactamase domain-containing protein 2577238 6355692 Clim_2346 Chlorobium limicola DSM 245 beta-lactamase domain-containing protein YP_001944348.1 2576558 R 290315 CDS YP_001944349.1 189347820 6355693 complement(2577219..2577527) 1 NC_010803.1 KEGG: cph:Cpha266_0180 hypothetical protein; hypothetical protein 2577527 6355693 Clim_2347 Chlorobium limicola DSM 245 hypothetical protein YP_001944349.1 2577219 R 290315 CDS YP_001944350.1 189347821 6355694 complement(2577524..2580754) 1 NC_010803.1 PFAM: acriflavin resistance protein; KEGG: cph:Cpha266_0181 acriflavin resistance protein; acriflavin resistance protein 2580754 6355694 Clim_2348 Chlorobium limicola DSM 245 acriflavin resistance protein YP_001944350.1 2577524 R 290315 CDS YP_001944351.1 189347822 6355695 complement(2580747..2581178) 1 NC_010803.1 KEGG: plt:Plut_2000 hypothetical protein; hypothetical protein 2581178 6355695 Clim_2349 Chlorobium limicola DSM 245 hypothetical protein YP_001944351.1 2580747 R 290315 CDS YP_001944352.1 189347823 6355696 complement(2581217..2582542) 1 NC_010803.1 PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_0183 outer membrane efflux protein; outer membrane efflux protein 2582542 6355696 Clim_2350 Chlorobium limicola DSM 245 outer membrane efflux protein YP_001944352.1 2581217 R 290315 CDS YP_001944353.1 189347824 6355697 complement(2582549..2582779) 1 NC_010803.1 PFAM: protein of unknown function DUF156; KEGG: cph:Cpha266_0184 hypothetical protein; hypothetical protein 2582779 6355697 Clim_2351 Chlorobium limicola DSM 245 hypothetical protein YP_001944353.1 2582549 R 290315 CDS YP_001944354.1 189347825 6355698 complement(2582903..2583514) 1 NC_010803.1 KEGG: plt:Plut_2003 hypothetical protein; hypothetical protein 2583514 6355698 Clim_2352 Chlorobium limicola DSM 245 hypothetical protein YP_001944354.1 2582903 R 290315 CDS YP_001944355.1 189347826 6355699 2583647..2583850 1 NC_010803.1 KEGG: plt:Plut_2004 hypothetical protein; hypothetical protein 2583850 6355699 Clim_2353 Chlorobium limicola DSM 245 hypothetical protein YP_001944355.1 2583647 D 290315 CDS YP_001944356.1 189347827 6355700 2584065..2584292 1 NC_010803.1 KEGG: plt:Plut_2005 chlorosome envelope protein B; chlorosome envelope protein B 2584292 6355700 Clim_2354 Chlorobium limicola DSM 245 chlorosome envelope protein B YP_001944356.1 2584065 D 290315 CDS YP_001944357.1 189347828 6355701 2584335..2585411 1 NC_010803.1 PFAM: aminoglycoside phosphotransferase; KEGG: cph:Cpha266_0203 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 2585411 6355701 Clim_2355 Chlorobium limicola DSM 245 aminoglycoside phosphotransferase YP_001944357.1 2584335 D 290315 CDS YP_001944358.1 189347829 6355702 2585408..2586340 1 NC_010803.1 PFAM: Nucleotidyl transferase; KEGG: cph:Cpha266_0204 nucleotidyl transferase; nucleotidyl transferase 2586340 6355702 Clim_2356 Chlorobium limicola DSM 245 nucleotidyl transferase YP_001944358.1 2585408 D 290315 CDS YP_001944359.1 189347830 6355703 2586367..2587530 1 NC_010803.1 PFAM: conserved hypothetical protein; KEGG: cph:Cpha266_0205 uncharacterised conserved protein UCP016719; hypothetical protein 2587530 6355703 Clim_2357 Chlorobium limicola DSM 245 hypothetical protein YP_001944359.1 2586367 D 290315 CDS YP_001944360.1 189347831 6355704 2587552..2588970 1 NC_010803.1 PFAM: Na+/solute symporter; KEGG: cph:Cpha266_0206 Na+/solute symporter; Na+/solute symporter 2588970 6355704 Clim_2358 Chlorobium limicola DSM 245 Na+/solute symporter YP_001944360.1 2587552 D 290315 CDS YP_001944361.1 189347832 6355705 2589072..2589329 1 NC_010803.1 PFAM: bacteriochlorophyll C binding protein; KEGG: plt:Plut_2013 chlorosome envelope protein E; bacteriochlorophyll C binding protein 2589329 6355705 Clim_2359 Chlorobium limicola DSM 245 bacteriochlorophyll C binding protein YP_001944361.1 2589072 D 290315 CDS YP_001944362.1 189347833 6355706 complement(2589409..2590107) 1 NC_010803.1 PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; KEGG: cph:Cpha266_0208 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 2590107 6355706 Clim_2360 Chlorobium limicola DSM 245 NAD-dependent epimerase/dehydratase YP_001944362.1 2589409 R 290315 CDS YP_001944363.1 189347834 6355707 2590311..2591663 1 NC_010803.1 PFAM: pentapeptide repeat protein; KEGG: cph:Cpha266_0209 pentapeptide repeat protein; pentapeptide repeat-containing protein 2591663 6355707 Clim_2361 Chlorobium limicola DSM 245 pentapeptide repeat-containing protein YP_001944363.1 2590311 D 290315 CDS YP_001944364.1 189347835 6355708 2591756..2591989 1 NC_010803.1 KEGG: pvi:Cvib_1657 hypothetical protein; hypothetical protein 2591989 6355708 Clim_2362 Chlorobium limicola DSM 245 hypothetical protein YP_001944364.1 2591756 D 290315 CDS YP_001944365.1 189347836 6355709 complement(2592013..2592306) 1 NC_010803.1 KEGG: cph:Cpha266_0211 hypothetical protein; hypothetical protein 2592306 6355709 Clim_2363 Chlorobium limicola DSM 245 hypothetical protein YP_001944365.1 2592013 R 290315 CDS YP_001944366.1 189347837 6355710 complement(2592454..2593641) 1 NC_010803.1 KEGG: cph:Cpha266_0213 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; arsenite-activated ATPase ArsA 2593641 6355710 Clim_2364 Chlorobium limicola DSM 245 arsenite-activated ATPase ArsA YP_001944366.1 2592454 R 290315 CDS YP_001944367.1 189347838 6355711 complement(2593715..2594641) 1 NC_010803.1 PFAM: hypothetical protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: cph:Cpha266_0214 tetratricopeptide TPR_2 repeat protein; hypothetical protein 2594641 6355711 Clim_2365 Chlorobium limicola DSM 245 hypothetical protein YP_001944367.1 2593715 R 290315 CDS YP_001944368.1 189347839 6355836 2594918..2595409 1 NC_010803.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: cph:Cpha266_0215 rare lipoprotein A; rare lipoprotein A 2595409 6355836 Clim_2366 Chlorobium limicola DSM 245 rare lipoprotein A YP_001944368.1 2594918 D 290315 CDS YP_001944369.1 189347840 6355838 2595506..2595892 1 NC_010803.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: plt:Plut_2020 rare lipoprotein A; rare lipoprotein A 2595892 6355838 Clim_2367 Chlorobium limicola DSM 245 rare lipoprotein A YP_001944369.1 2595506 D 290315 CDS YP_001944370.1 189347841 6355839 complement(2595896..2596609) 1 NC_010803.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cte:CT2121 methyltransferase; type 12 methyltransferase 2596609 6355839 Clim_2368 Chlorobium limicola DSM 245 type 12 methyltransferase YP_001944370.1 2595896 R 290315 CDS YP_001944371.1 189347842 6355840 complement(2596631..2597221) 1 NC_010803.1 PFAM: conserved hypothetical protein; KEGG: bpt:Bpet4723 lysine decarboxylase; hypothetical protein 2597221 6355840 Clim_2369 Chlorobium limicola DSM 245 hypothetical protein YP_001944371.1 2596631 R 290315 CDS YP_001944372.1 189347843 6355841 complement(2597302..2598063) 1 NC_010803.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: fjo:Fjoh_2091 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2598063 6355841 Clim_2370 Chlorobium limicola DSM 245 short-chain dehydrogenase/reductase SDR YP_001944372.1 2597302 R 290315 CDS YP_001944373.1 189347844 6355842 complement(2598366..2598962) 1 NC_010803.1 PFAM: YceI family protein; KEGG: gme:Gmet_3449 YceI; hypothetical protein 2598962 6355842 Clim_2371 Chlorobium limicola DSM 245 hypothetical protein YP_001944373.1 2598366 R 290315 CDS YP_001944374.1 189347845 6355843 complement(2599118..2599684) 1 NC_010803.1 KEGG: sfu:Sfum_2080 hypothetical protein; hypothetical protein 2599684 6355843 Clim_2372 Chlorobium limicola DSM 245 hypothetical protein YP_001944374.1 2599118 R 290315 CDS YP_001944375.1 189347846 6355844 complement(2599794..2601215) 1 NC_010803.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 2601215 trmE 6355844 trmE Chlorobium limicola DSM 245 tRNA modification GTPase TrmE YP_001944375.1 2599794 R 290315 CDS YP_001944376.1 189347847 6355845 complement(2601250..2602020) 1 NC_010803.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cph:Cpha266_0152 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2602020 6355845 Clim_2374 Chlorobium limicola DSM 245 short-chain dehydrogenase/reductase SDR YP_001944376.1 2601250 R 290315 CDS YP_001944377.1 189347848 6355846 2602044..2602856 1 NC_010803.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 2602856 mazG 6355846 mazG Chlorobium limicola DSM 245 nucleoside triphosphate pyrophosphohydrolase YP_001944377.1 2602044 D 290315 CDS YP_001944378.1 189347849 6355847 2602876..2603097 1 NC_010803.1 hypothetical protein 2603097 6355847 Clim_2376 Chlorobium limicola DSM 245 hypothetical protein YP_001944378.1 2602876 D 290315 CDS YP_001944379.1 189347850 6355848 complement(2603118..2603783) 1 NC_010803.1 PFAM: phospholipase/Carboxylesterase; KEGG: cph:Cpha266_2535 phospholipase/carboxylesterase; phospholipase/carboxylesterase 2603783 6355848 Clim_2377 Chlorobium limicola DSM 245 phospholipase/carboxylesterase YP_001944379.1 2603118 R 290315 CDS YP_001944380.1 189347851 6355849 complement(2603839..2607138) 1 NC_010803.1 KEGG: cph:Cpha266_2536 trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; trehalose synthase 2607138 6355849 Clim_2378 Chlorobium limicola DSM 245 trehalose synthase YP_001944380.1 2603839 R 290315 CDS YP_001944381.1 189347852 6355850 complement(2607182..2609197) 1 NC_010803.1 PFAM: alpha amylase catalytic region; KEGG: cph:Cpha266_2537 alpha amylase, catalytic region; alpha amylase 2609197 6355850 Clim_2379 Chlorobium limicola DSM 245 alpha amylase YP_001944381.1 2607182 R 290315 CDS YP_001944382.1 189347853 6355851 2609828..2610577 1 NC_010803.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: cph:Cpha266_2538 bacterial peptide chain release factor 2 (bRF-2); peptide chain release factor 2 2610577 6355851 Clim_2380 Chlorobium limicola DSM 245 peptide chain release factor 2 YP_001944382.1 2609828 D 290315 CDS YP_001944383.1 189347854 6355852 2610591..2611421 1 NC_010803.1 PFAM: metallophosphoesterase; KEGG: cph:Cpha266_2539 hypothetical protein; metallophosphoesterase 2611421 6355852 Clim_2381 Chlorobium limicola DSM 245 metallophosphoesterase YP_001944383.1 2610591 D 290315 CDS YP_001944384.1 189347855 6355853 2611418..2612278 1 NC_010803.1 PFAM: Peptidase M23; KEGG: plt:Plut_2033 membrane proteins related to metalloendopeptidase-like; peptidase M23 2612278 6355853 Clim_2382 Chlorobium limicola DSM 245 peptidase M23 YP_001944384.1 2611418 D 290315 CDS YP_001944385.1 189347856 6355854 2612664..2612885 1 NC_010803.1 hypothetical protein 2612885 6355854 Clim_2383 Chlorobium limicola DSM 245 hypothetical protein YP_001944385.1 2612664 D 290315 CDS YP_001944386.1 189347857 6355855 2612986..2614080 1 NC_010803.1 PFAM: Radical SAM domain protein; KEGG: cph:Cpha266_1175 radical SAM domain protein; radical SAM protein 2614080 6355855 Clim_2384 Chlorobium limicola DSM 245 radical SAM protein YP_001944386.1 2612986 D 290315 CDS YP_001944387.1 189347858 6355856 2614164..2615414 1 NC_010803.1 PFAM: OmpA/MotB domain protein; KEGG: cph:Cpha266_2107 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 2615414 6355856 Clim_2385 Chlorobium limicola DSM 245 OmpA/MotB domain-containing protein YP_001944387.1 2614164 D 290315 CDS YP_001944388.1 189347859 6355857 complement(2615511..2616032) 1 NC_010803.1 KEGG: lch:Lcho_4189 hypothetical protein; hypothetical protein 2616032 6355857 Clim_2386 Chlorobium limicola DSM 245 hypothetical protein YP_001944388.1 2615511 R 290315 CDS YP_001944389.1 189347860 6355858 2616181..2616336 1 NC_010803.1 hypothetical protein 2616336 6355858 Clim_2387 Chlorobium limicola DSM 245 hypothetical protein YP_001944389.1 2616181 D 290315 CDS YP_001944390.1 189347861 6355859 2616396..2617148 1 NC_010803.1 KEGG: cph:Cpha266_1987 hypothetical protein; hypothetical protein 2617148 6355859 Clim_2388 Chlorobium limicola DSM 245 hypothetical protein YP_001944390.1 2616396 D 290315 CDS YP_001944391.1 189347862 6355861 complement(2617621..2618730) 1 NC_010803.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: cph:Cpha266_2553 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 2618730 6355861 Clim_2390 Chlorobium limicola DSM 245 UDP-N-acetylglucosamine 2-epimerase YP_001944391.1 2617621 R 290315 CDS YP_001944392.1 189347863 6355862 2618866..2619789 1 NC_010803.1 PFAM: OstA family protein; KEGG: cph:Cpha266_2554 hypothetical protein; OstA family protein 2619789 6355862 Clim_2391 Chlorobium limicola DSM 245 OstA family protein YP_001944392.1 2618866 D 290315 CDS YP_001944393.1 189347864 6355863 complement(2619875..2620132) 1 NC_010803.1 TIGRFAM: regulatory protein, FmdB family; PFAM: regulatory protein FmdB; KEGG: cph:Cpha266_2555 regulatory protein, FmdB family; FmdB family regulatory protein 2620132 6355863 Clim_2392 Chlorobium limicola DSM 245 FmdB family regulatory protein YP_001944393.1 2619875 R 290315 CDS YP_001944394.1 189347865 6355864 2620349..2621134 1 NC_010803.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: cph:Cpha266_2556 DNA repair protein RecO; DNA repair protein RecO 2621134 6355864 Clim_2393 Chlorobium limicola DSM 245 DNA repair protein RecO YP_001944394.1 2620349 D 290315 CDS YP_001944395.1 189347866 6355865 2621291..2622586 1 NC_010803.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 2622586 6355865 Clim_2394 Chlorobium limicola DSM 245 glutamate-1-semialdehyde aminotransferase YP_001944395.1 2621291 D 290315 CDS YP_001944396.1 189347867 6355866 complement(2622720..2627018) 1 NC_010803.1 KEGG: bch:Bcen2424_3497 hypothetical protein; hypothetical protein 2627018 6355866 Clim_2395 Chlorobium limicola DSM 245 hypothetical protein YP_001944396.1 2622720 R 290315 CDS YP_001944397.1 189347868 6355868 complement(2629057..2629392) 1 NC_010803.1 PFAM: protein of unknown function DUF190; KEGG: cte:CT2101 hypothetical protein; hypothetical protein 2629392 6355868 Clim_2397 Chlorobium limicola DSM 245 hypothetical protein YP_001944397.1 2629057 R 290315 CDS YP_001944398.1 189347869 6355869 complement(2629389..2629781) 1 NC_010803.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 2629781 6355869 Clim_2398 Chlorobium limicola DSM 245 camphor resistance protein CrcB YP_001944398.1 2629389 R 290315 CDS YP_001944399.1 189347870 6355870 complement(2629771..2630001) 1 NC_010803.1 KEGG: cph:Cpha266_2560 hypothetical protein; hypothetical protein 2630001 6355870 Clim_2399 Chlorobium limicola DSM 245 hypothetical protein YP_001944399.1 2629771 R 290315 CDS YP_001944400.1 189347871 6355871 2630659..2632875 1 NC_010803.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: cph:Cpha266_2562 formate dehydrogenase; molybdopterin oxidoreductase 2632875 6355871 Clim_2400 Chlorobium limicola DSM 245 molybdopterin oxidoreductase YP_001944400.1 2630659 D 290315 CDS YP_001944401.1 189347872 6355872 2632879..2633445 1 NC_010803.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cph:Cpha266_2563 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 2633445 6355872 Clim_2401 Chlorobium limicola DSM 245 4Fe-4S ferredoxin YP_001944401.1 2632879 D 290315 CDS YP_001944402.1 189347873 6355873 2633448..2634443 1 NC_010803.1 PFAM: Polysulphide reductase NrfD; KEGG: cph:Cpha266_2564 polysulphide reductase, NrfD; polysulfide reductase NrfD 2634443 6355873 Clim_2402 Chlorobium limicola DSM 245 polysulfide reductase NrfD YP_001944402.1 2633448 D 290315 CDS YP_001944403.1 189347874 6355874 complement(2634544..2634939) 1 NC_010803.1 KEGG: cph:Cpha266_1687 hypothetical protein; hypothetical protein 2634939 6355874 Clim_2403 Chlorobium limicola DSM 245 hypothetical protein YP_001944403.1 2634544 R 290315 CDS YP_001944404.1 189347875 6355875 complement(2635129..2635245) 1 NC_010803.1 hypothetical protein 2635245 6355875 Clim_2404 Chlorobium limicola DSM 245 hypothetical protein YP_001944404.1 2635129 R 290315 CDS YP_001944405.1 189347876 6355876 complement(2635284..2636717) 1 NC_010803.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cph:Cpha266_2569 sulfide-quinone reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2636717 6355876 Clim_2405 Chlorobium limicola DSM 245 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001944405.1 2635284 R 290315 CDS YP_001944406.1 189347877 6355877 2636942..2637370 1 NC_010803.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: cph:Cpha266_2570 Holliday junction resolvase YqgF; Holliday junction resolvase YqgF 2637370 6355877 Clim_2406 Chlorobium limicola DSM 245 Holliday junction resolvase YqgF YP_001944406.1 2636942 D 290315 CDS YP_001944407.1 189347878 6355878 2637496..2638062 1 NC_010803.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 2638062 pyrE 6355878 pyrE Chlorobium limicola DSM 245 orotate phosphoribosyltransferase YP_001944407.1 2637496 D 290315 CDS YP_001944408.1 189347879 6355879 2638067..2638936 1 NC_010803.1 PFAM: Prephenate dehydrogenase; KEGG: cph:Cpha266_2572 prephenate dehydrogenase; prephenate dehydrogenase 2638936 6355879 Clim_2408 Chlorobium limicola DSM 245 prephenate dehydrogenase YP_001944408.1 2638067 D 290315 CDS YP_001944409.1 189347880 6355880 2638933..2639796 1 NC_010803.1 PFAM: ATP-NAD/AcoX kinase; KEGG: cph:Cpha266_2573 NAD(+) kinase; ATP-NAD/AcoX kinase 2639796 6355880 Clim_2409 Chlorobium limicola DSM 245 ATP-NAD/AcoX kinase YP_001944409.1 2638933 D 290315 CDS YP_001944410.1 189347881 6355881 2639793..2641301 1 NC_010803.1 KEGG: cph:Cpha266_2574 hypothetical protein; hypothetical protein 2641301 6355881 Clim_2410 Chlorobium limicola DSM 245 hypothetical protein YP_001944410.1 2639793 D 290315 CDS YP_001944411.1 189347882 6355882 complement(2641330..2641875) 1 NC_010803.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: cph:Cpha266_2575 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 2641875 6355882 Clim_2411 Chlorobium limicola DSM 245 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_001944411.1 2641330 R 290315 CDS YP_001944412.1 189347883 6355883 complement(2641915..2642745) 1 NC_010803.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 2642745 6355883 Clim_2412 Chlorobium limicola DSM 245 2-dehydro-3-deoxyphosphooctonate aldolase YP_001944412.1 2641915 R 290315 CDS YP_001944413.1 189347884 6355884 2642898..2644226 1 NC_010803.1 PFAM: ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: cph:Cpha266_2577 ATPase AAA-2 domain protein; ATPase AAA 2644226 6355884 Clim_2413 Chlorobium limicola DSM 245 ATPase AAA YP_001944413.1 2642898 D 290315 CDS YP_001944414.1 189347885 6355885 2644223..2645344 1 NC_010803.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: cph:Cpha266_2578 glycoside hydrolase, family 3 domain protein; beta-N-acetylhexosaminidase 2645344 6355885 Clim_2414 Chlorobium limicola DSM 245 beta-N-acetylhexosaminidase YP_001944414.1 2644223 D 290315 CDS YP_001944415.1 189347886 6355886 2645344..2645838 1 NC_010803.1 PFAM: Phosphoglycerate mutase; KEGG: cph:Cpha266_2579 phosphohistidine phosphatase, SixA; phosphohistidine phosphatase SixA 2645838 6355886 Clim_2415 Chlorobium limicola DSM 245 phosphohistidine phosphatase SixA YP_001944415.1 2645344 D 290315 CDS YP_001944416.1 189347887 6355887 complement(2645852..2646853) 1 NC_010803.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 2646853 gpsA 6355887 gpsA Chlorobium limicola DSM 245 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_001944416.1 2645852 R 290315 CDS YP_001944417.1 189347888 6355888 complement(2646871..2647578) 1 NC_010803.1 PFAM: protein of unknown function DUF205; KEGG: cph:Cpha266_2581 acyl-phosphate glycerol-3-phosphate acyltransferase; membrane protein 2647578 6355888 Clim_2417 Chlorobium limicola DSM 245 membrane protein YP_001944417.1 2646871 R 290315 CDS YP_001944418.1 189347889 6355889 complement(2647623..2648612) 1 NC_010803.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 2648612 6355889 Clim_2418 Chlorobium limicola DSM 245 phosphoribosylaminoimidazole synthetase YP_001944418.1 2647623 R 290315 CDS YP_001944419.1 189347890 6355890 complement(2648656..2650071) 1 NC_010803.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; aspartate kinase III 2650071 6355890 Clim_2419 Chlorobium limicola DSM 245 aspartate kinase III YP_001944419.1 2648656 R 290315 CDS YP_001944420.1 189347891 6355891 2650192..2650815 1 NC_010803.1 PFAM: NLP/P60 protein; KEGG: cph:Cpha266_2584 NLP/P60 protein; NLP/P60 protein 2650815 6355891 Clim_2420 Chlorobium limicola DSM 245 NLP/P60 protein YP_001944420.1 2650192 D 290315 CDS YP_001944421.1 189347892 6355892 2650921..2651802 1 NC_010803.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 2651802 prmA 6355892 prmA Chlorobium limicola DSM 245 50S ribosomal protein L11 methyltransferase YP_001944421.1 2650921 D 290315 CDS YP_001944422.1 189347893 6355893 2651815..2652750 1 NC_010803.1 PFAM: Ppx/GppA phosphatase; KEGG: cph:Cpha266_2586 Ppx/GppA phosphatase; Ppx/GppA phosphatase 2652750 6355893 Clim_2422 Chlorobium limicola DSM 245 Ppx/GppA phosphatase YP_001944422.1 2651815 D 290315 CDS YP_001944423.1 189347894 6355894 complement(2652683..2653942) 1 NC_010803.1 KEGG: cph:Cpha266_2587 hypothetical protein; hypothetical protein 2653942 6355894 Clim_2423 Chlorobium limicola DSM 245 hypothetical protein YP_001944423.1 2652683 R 290315 CDS YP_001944424.1 189347895 6355895 complement(2653939..2655642) 1 NC_010803.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cph:Cpha266_2588 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 2655642 6355895 Clim_2424 Chlorobium limicola DSM 245 AMP-dependent synthetase and ligase YP_001944424.1 2653939 R 290315 CDS YP_001944425.1 189347896 6355896 complement(2655710..2656999) 1 NC_010803.1 TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: cph:Cpha266_0117 aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2656999 6355896 Clim_2425 Chlorobium limicola DSM 245 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_001944425.1 2655710 R 290315 CDS YP_001944426.1 189347897 6355897 complement(2657018..2657707) 1 NC_010803.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 2657707 bioD 6355897 bioD Chlorobium limicola DSM 245 dithiobiotin synthetase YP_001944426.1 2657018 R 290315 CDS YP_001944427.1 189347898 6355898 complement(2657704..2658486) 1 NC_010803.1 TIGRFAM: biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cph:Cpha266_0115 biotin biosynthesis protein BioC; biotin biosynthesis protein BioC 2658486 6355898 Clim_2427 Chlorobium limicola DSM 245 biotin biosynthesis protein BioC YP_001944427.1 2657704 R 290315 CDS YP_001944428.1 189347899 6355899 complement(2658471..2659154) 1 NC_010803.1 PFAM: protein of unknown function DUF452; KEGG: cph:Cpha266_0114 protein of unknown function DUF452; hypothetical protein 2659154 6355899 Clim_2428 Chlorobium limicola DSM 245 hypothetical protein YP_001944428.1 2658471 R 290315 CDS YP_001944429.1 189347900 6355900 complement(2659151..2660317) 1 NC_010803.1 PFAM: aminotransferase class I and II; KEGG: cph:Cpha266_0113 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase 2660317 6355900 Clim_2429 Chlorobium limicola DSM 245 8-amino-7-oxononanoate synthase YP_001944429.1 2659151 R 290315 CDS YP_001944430.1 189347901 6355901 complement(2660323..2661333) 1 NC_010803.1 KEGG: cte:CT0052 biotin synthetase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 2661333 6355901 Clim_2430 Chlorobium limicola DSM 245 biotin synthase YP_001944430.1 2660323 R 290315 CDS YP_001944431.1 189347902 6355902 complement(2661346..2662338) 1 NC_010803.1 KEGG: cph:Cpha266_0111 biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; Helix-turn-helix type 11 domain protein; biotin--acetyl-CoA-carboxylase ligase 2662338 6355902 Clim_2431 Chlorobium limicola DSM 245 biotin--acetyl-CoA-carboxylase ligase YP_001944431.1 2661346 R 290315 CDS YP_001944432.1 189347903 6355903 complement(2662457..2664280) 1 NC_010803.1 PFAM: cell wall hydrolase/autolysin; KEGG: cph:Cpha266_0110 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 2664280 6355903 Clim_2432 Chlorobium limicola DSM 245 N-acetylmuramoyl-L-alanine amidase YP_001944432.1 2662457 R 290315 CDS YP_001944433.1 189347904 6355904 2664406..2666802 1 NC_010803.1 KEGG: cph:Cpha266_0109 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein; DNA topoisomerase I 2666802 6355904 Clim_2433 Chlorobium limicola DSM 245 DNA topoisomerase I YP_001944433.1 2664406 D 290315 CDS YP_001944434.1 189347905 6355905 complement(2666792..2668927) 1 NC_010803.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: cph:Cpha266_0108 ferrous iron transport protein B; ferrous iron transport protein B 2668927 6355905 Clim_2434 Chlorobium limicola DSM 245 ferrous iron transport protein B YP_001944434.1 2666792 R 290315 CDS YP_001944435.1 189347906 6355906 complement(2668927..2669214) 1 NC_010803.1 PFAM: FeoA family protein; KEGG: cph:Cpha266_0107 FeoA family protein; FeoA family protein 2669214 6355906 Clim_2435 Chlorobium limicola DSM 245 FeoA family protein YP_001944435.1 2668927 R 290315 CDS YP_001944436.1 189347907 6355907 complement(2669332..2672067) 1 NC_010803.1 TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: cph:Cpha266_0106 aconitase; aconitate hydratase 1 2672067 6355907 Clim_2436 Chlorobium limicola DSM 245 aconitate hydratase 1 YP_001944436.1 2669332 R 290315 CDS YP_001944437.1 189347908 6355908 complement(2672109..2672495) 1 NC_010803.1 PFAM: histidine triad (HIT) protein; KEGG: cph:Cpha266_0105 histidine triad (HIT) protein; histidine triad (HIT) protein 2672495 6355908 Clim_2437 Chlorobium limicola DSM 245 histidine triad (HIT) protein YP_001944437.1 2672109 R 290315 CDS YP_001944438.1 189347909 6355909 complement(2672550..2673068) 1 NC_010803.1 KEGG: cph:Cpha266_0104 hypothetical protein; hypothetical protein 2673068 6355909 Clim_2438 Chlorobium limicola DSM 245 hypothetical protein YP_001944438.1 2672550 R 290315 CDS YP_001944439.1 189347910 6355910 complement(2673177..2674508) 1 NC_010803.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: cph:Cpha266_0098 protein of unknown function DUF21; hypothetical protein 2674508 6355910 Clim_2439 Chlorobium limicola DSM 245 hypothetical protein YP_001944439.1 2673177 R 290315 CDS YP_001944440.1 189347911 6355911 2674899..2675567 1 NC_010803.1 KEGG: plt:Plut_2079 Fibrobacter succinogenes major paralogous domain; hypothetical protein 2675567 6355911 Clim_2440 Chlorobium limicola DSM 245 hypothetical protein YP_001944440.1 2674899 D 290315 CDS YP_001944441.1 189347912 6355912 complement(2675683..2676456) 1 NC_010803.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cph:Cpha266_0100 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; succinate dehydrogenase/fumarate reductase iron-sulfur subunit 2676456 6355912 Clim_2441 Chlorobium limicola DSM 245 succinate dehydrogenase/fumarate reductase iron-sulfur subunit YP_001944441.1 2675683 R 290315 CDS YP_001944442.1 189347913 6355913 complement(2676468..2678408) 1 NC_010803.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 2678408 sdhA 6355913 sdhA Chlorobium limicola DSM 245 succinate dehydrogenase flavoprotein subunit YP_001944442.1 2676468 R 290315 CDS YP_001944443.1 189347914 6355914 complement(2678437..2679132) 1 NC_010803.1 TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: cph:Cpha266_0102 succinate dehydrogenase subunit C; succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 2679132 6355914 Clim_2443 Chlorobium limicola DSM 245 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family YP_001944443.1 2678437 R 290315 CDS YP_001944444.1 189347915 6355915 complement(2679198..2679842) 1 NC_010803.1 PFAM: cyclase family protein; KEGG: cph:Cpha266_0103 cyclase family protein; cyclase family protein 2679842 6355915 Clim_2444 Chlorobium limicola DSM 245 cyclase family protein YP_001944444.1 2679198 R 290315 CDS YP_001944445.1 189347916 6355916 complement(2679875..2681002) 1 NC_010803.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 2681002 6355916 Clim_2445 Chlorobium limicola DSM 245 dihydroorotate dehydrogenase 2 YP_001944445.1 2679875 R 290315 CDS YP_001944446.1 189347917 6355917 2681007..2681516 1 NC_010803.1 KEGG: nfa:nfa2750 hypothetical protein; hypothetical protein 2681516 6355917 Clim_2446 Chlorobium limicola DSM 245 hypothetical protein YP_001944446.1 2681007 D 290315 CDS YP_001944447.1 189347918 6355918 complement(2681527..2682987) 1 NC_010803.1 PFAM: Alkaline phosphatase; KEGG: cph:Cpha266_2693 alkaline phosphatase; alkaline phosphatase 2682987 6355918 Clim_2447 Chlorobium limicola DSM 245 alkaline phosphatase YP_001944447.1 2681527 R 290315 CDS YP_001944448.1 189347919 6354095 complement(2683142..2683756) 1 NC_010803.1 KEGG: cph:Cpha266_2695 hypothetical protein; hypothetical protein 2683756 6354095 Clim_2448 Chlorobium limicola DSM 245 hypothetical protein YP_001944448.1 2683142 R 290315 CDS YP_001944449.1 189347920 6354719 complement(2683807..2684529) 1 NC_010803.1 PFAM: alpha/beta hydrolase fold; KEGG: pvi:Cvib_1726 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2684529 6354719 Clim_2449 Chlorobium limicola DSM 245 alpha/beta hydrolase fold protein YP_001944449.1 2683807 R 290315 CDS YP_001944450.1 189347921 6354720 2684711..2685226 1 NC_010803.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: cph:Cpha266_2697 rare lipoprotein A; rare lipoprotein A 2685226 6354720 Clim_2450 Chlorobium limicola DSM 245 rare lipoprotein A YP_001944450.1 2684711 D 290315 CDS YP_001944451.1 189347922 6354722 complement(2685811..2686695) 1 NC_010803.1 KEGG: cph:Cpha266_1071 hypothetical protein; hypothetical protein 2686695 6354722 Clim_2452 Chlorobium limicola DSM 245 hypothetical protein YP_001944451.1 2685811 R 290315 CDS YP_001944452.1 189347923 6354723 complement(2686706..2687626) 1 NC_010803.1 PFAM: protein of unknown function DUF89; KEGG: cph:Cpha266_1577 protein of unknown function DUF89; hypothetical protein 2687626 6354723 Clim_2453 Chlorobium limicola DSM 245 hypothetical protein YP_001944452.1 2686706 R 290315 CDS YP_001944453.1 189347924 6354724 complement(2687903..2688868) 1 NC_010803.1 PFAM: protein of unknown function DUF1568; KEGG: cph:Cpha266_1578 protein of unknown function DUF1568; hypothetical protein 2688868 6354724 Clim_2454 Chlorobium limicola DSM 245 hypothetical protein YP_001944453.1 2687903 R 290315 CDS YP_001944454.1 189347925 6354725 complement(2688980..2690365) 1 NC_010803.1 KEGG: sgr:SGR_4270 hypothetical protein; hypothetical protein 2690365 6354725 Clim_2455 Chlorobium limicola DSM 245 hypothetical protein YP_001944454.1 2688980 R 290315 CDS YP_001944455.1 189347926 6354726 complement(2690708..2691217) 1 NC_010803.1 KEGG: swi:Swit_0248 hypothetical protein; hypothetical protein 2691217 6354726 Clim_2456 Chlorobium limicola DSM 245 hypothetical protein YP_001944455.1 2690708 R 290315 CDS YP_001944456.1 189347927 6354727 complement(2691817..2692176) 1 NC_010803.1 KEGG: cph:Cpha266_1691 hypothetical protein; hypothetical protein 2692176 6354727 Clim_2457 Chlorobium limicola DSM 245 hypothetical protein YP_001944456.1 2691817 R 290315 CDS YP_001944457.1 189347928 6354728 2692201..2692356 1 NC_010803.1 hypothetical protein 2692356 6354728 Clim_2458 Chlorobium limicola DSM 245 hypothetical protein YP_001944457.1 2692201 D 290315 CDS YP_001944458.1 189347929 6354729 2692675..2693433 1 NC_010803.1 KEGG: rpe:RPE_2427 hypothetical protein; hypothetical protein 2693433 6354729 Clim_2459 Chlorobium limicola DSM 245 hypothetical protein YP_001944458.1 2692675 D 290315 CDS YP_001944459.1 189347930 6354730 2693441..2694043 1 NC_010803.1 KEGG: swi:Swit_1093 hypothetical protein; hypothetical protein 2694043 6354730 Clim_2460 Chlorobium limicola DSM 245 hypothetical protein YP_001944459.1 2693441 D 290315 CDS YP_001944460.1 189347931 6354731 complement(2694087..2698298) 1 NC_010803.1 KEGG: cph:Cpha266_1705 protein of unknown function DUF559; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: protein of unknown function DUF450; protein of unknown function DUF559; SMART: DEAD-like helicases; HsdR family type I site-specific deoxyribonuclease 2698298 6354731 Clim_2461 Chlorobium limicola DSM 245 HsdR family type I site-specific deoxyribonuclease YP_001944460.1 2694087 R 290315 CDS YP_001944461.1 189347932 6354732 complement(2698302..2699744) 1 NC_010803.1 PFAM: AAA-4 family protein; KEGG: cph:Cpha266_1706 transcriptional regulator; transcriptional regulator 2699744 6354732 Clim_2462 Chlorobium limicola DSM 245 transcriptional regulator YP_001944461.1 2698302 R 290315 CDS YP_001944462.1 189347933 6354733 complement(2699891..2700721) 1 NC_010803.1 KEGG: nmu:Nmul_A0110 hypothetical protein; hypothetical protein 2700721 6354733 Clim_2463 Chlorobium limicola DSM 245 hypothetical protein YP_001944462.1 2699891 R 290315 CDS YP_001944463.1 189347934 6354734 2700847..2702214 1 NC_010803.1 PFAM: transposase IS4 family protein; KEGG: cph:Cpha266_2634 transposase, IS4 family protein; transposase IS4 family protein 2702214 6354734 Clim_2464 Chlorobium limicola DSM 245 transposase IS4 family protein YP_001944463.1 2700847 D 290315 CDS YP_001944464.1 189347935 6354735 complement(2702329..2704131) 1 NC_010803.1 PFAM: protein of unknown function DUF87; KEGG: pst:PSPTO_4332 hypothetical protein; hypothetical protein 2704131 6354735 Clim_2465 Chlorobium limicola DSM 245 hypothetical protein YP_001944464.1 2702329 R 290315 CDS YP_001944465.1 189347936 6354736 complement(2704128..2705354) 1 NC_010803.1 KEGG: pst:PSPTO_4326 hypothetical protein; hypothetical protein 2705354 6354736 Clim_2466 Chlorobium limicola DSM 245 hypothetical protein YP_001944465.1 2704128 R 290315 CDS YP_001944466.1 189347937 6354737 complement(2705381..2706697) 1 NC_010803.1 PFAM: restriction modification system DNA specificity domain; KEGG: tcx:Tcr_0333 restriction modification system DNA specificity domain; restriction modification system DNA specificity domain 2706697 6354737 Clim_2467 Chlorobium limicola DSM 245 restriction modification system DNA specificity domain YP_001944466.1 2705381 R 290315 CDS YP_001944467.1 189347938 6354738 complement(2706702..2707556) 1 NC_010803.1 KEGG: cph:Cpha266_1711 DNA-damage-inducible protein D; DNA-damage-inducible protein D 2707556 dinD 6354738 dinD Chlorobium limicola DSM 245 DNA-damage-inducible protein D YP_001944467.1 2706702 R 290315 CDS YP_001944468.1 189347939 6354739 complement(2707553..2709871) 1 NC_010803.1 PFAM: N-6 DNA methylase; KEGG: cph:Cpha266_1712 N-6 DNA methylase; N-6 DNA methylase 2709871 6354739 Clim_2469 Chlorobium limicola DSM 245 N-6 DNA methylase YP_001944468.1 2707553 R 290315 CDS YP_001944469.1 189347940 6354740 2710030..2710137 1 NC_010803.1 hypothetical protein 2710137 6354740 Clim_2470 Chlorobium limicola DSM 245 hypothetical protein YP_001944469.1 2710030 D 290315 CDS YP_001944470.1 189347941 6354741 complement(2710159..2710947) 1 NC_010803.1 PFAM: Domain of unknown function DUF1828; KEGG: cph:Cpha266_1713 conserved hypothetical cytosolic protein; hypothetical protein 2710947 6354741 Clim_2471 Chlorobium limicola DSM 245 hypothetical protein YP_001944470.1 2710159 R 290315 CDS YP_001944471.1 189347942 6354742 complement(2710944..2711441) 1 NC_010803.1 KEGG: cph:Cpha266_1714 hypothetical protein; hypothetical protein 2711441 6354742 Clim_2472 Chlorobium limicola DSM 245 hypothetical protein YP_001944471.1 2710944 R 290315 CDS YP_001944472.1 189347943 6354744 2713000..2713314 1 NC_010803.1 KEGG: cph:Cpha266_1716 hypothetical protein; hypothetical protein 2713314 6354744 Clim_2474 Chlorobium limicola DSM 245 hypothetical protein YP_001944472.1 2713000 D 290315 CDS YP_001944473.1 189347944 6354745 complement(2713366..2717130) 1 NC_010803.1 KEGG: mrd:Mrad2831_6506 hypothetical protein; hypothetical protein 2717130 6354745 Clim_2475 Chlorobium limicola DSM 245 hypothetical protein YP_001944473.1 2713366 R 290315 CDS YP_001944474.1 189347945 6354746 complement(2717355..2717861) 1 NC_010803.1 KEGG: cph:Cpha266_1504 PIN domain protein; PIN domain-containing protein 2717861 6354746 Clim_2476 Chlorobium limicola DSM 245 PIN domain-containing protein YP_001944474.1 2717355 R 290315 CDS YP_001944475.1 189347946 6354747 complement(2717858..2719012) 1 NC_010803.1 PFAM: protein of unknown function DUF955; KEGG: cph:Cpha266_1505 protein of unknown function DUF955; hypothetical protein 2719012 6354747 Clim_2477 Chlorobium limicola DSM 245 hypothetical protein YP_001944475.1 2717858 R 290315 CDS YP_001944476.1 189347947 6354748 2719343..2719528 1 NC_010803.1 KEGG: cph:Cpha266_2705 hypothetical protein; hypothetical protein 2719528 6354748 Clim_2478 Chlorobium limicola DSM 245 hypothetical protein YP_001944476.1 2719343 D 290315 CDS YP_001944477.1 189347948 6354749 complement(2719701..2720369) 1 NC_010803.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase 2720369 6354749 Clim_2479 Chlorobium limicola DSM 245 translaldolase YP_001944477.1 2719701 R 290315 CDS YP_001944478.1 189347949 6354750 complement(2720391..2721440) 1 NC_010803.1 transforms a conserved lysine residue of initiation factor 5A into deoxyhypusine; deoxyhypusine synthase-like protein 2721440 6354750 Clim_2480 Chlorobium limicola DSM 245 deoxyhypusine synthase-like protein YP_001944478.1 2720391 R 290315 CDS YP_001944479.1 189347950 6354751 2721645..2721791 1 NC_010803.1 hypothetical protein 2721791 6354751 Clim_2481 Chlorobium limicola DSM 245 hypothetical protein YP_001944479.1 2721645 D 290315 CDS YP_001944480.1 189347951 6354752 2721799..2722821 1 NC_010803.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 2722821 6354752 Clim_2482 Chlorobium limicola DSM 245 tryptophanyl-tRNA synthetase YP_001944480.1 2721799 D 290315 CDS YP_001944481.1 189347952 6354753 2722861..2723562 1 NC_010803.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; beta-phosphoglucomutase family hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pvi:Cvib_1731 beta-phosphoglucomutase family hydrolase; beta-phosphoglucomutase family hydrolase 2723562 6354753 Clim_2483 Chlorobium limicola DSM 245 beta-phosphoglucomutase family hydrolase YP_001944481.1 2722861 D 290315 CDS YP_001944482.1 189347953 6354754 2723572..2725227 1 NC_010803.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 2725227 argS 6354754 argS Chlorobium limicola DSM 245 arginyl-tRNA synthetase YP_001944482.1 2723572 D 290315 CDS YP_001944483.1 189347954 6354755 complement(2725236..2725832) 1 NC_010803.1 TIGRFAM: cytidyltransferase-related domain protein; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; KEGG: cph:Cpha266_2703 nicotinate (nicotinamide) nucleotide adenylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 2725832 6354755 Clim_2485 Chlorobium limicola DSM 245 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_001944483.1 2725236 R 290315 CDS YP_001944484.1 189347955 6355103 complement(2725843..2726706) 1 NC_010803.1 KEGG: cph:Cpha266_2704 lipoprotein; lipoprotein 2726706 6355103 Clim_2486 Chlorobium limicola DSM 245 lipoprotein YP_001944484.1 2725843 R 290315 CDS YP_001944485.1 189347956 6355104 complement(2727359..2727841) 1 NC_010803.1 KEGG: cph:Cpha266_0683 hypothetical protein; hypothetical protein 2727841 6355104 Clim_2487 Chlorobium limicola DSM 245 hypothetical protein YP_001944485.1 2727359 R 290315 CDS YP_001944486.1 189347957 6355106 complement(2728315..2728860) 1 NC_010803.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 2728860 6355106 Clim_2488 Chlorobium limicola DSM 245 F0F1 ATP synthase subunit delta YP_001944486.1 2728315 R 290315 CDS YP_001944487.1 189347958 6355108 complement(2728876..2729403) 1 NC_010803.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 2729403 6355108 Clim_2489 Chlorobium limicola DSM 245 F0F1 ATP synthase subunit B YP_001944487.1 2728876 R 290315 CDS YP_001944488.1 189347959 6355109 complement(2729512..2729733) 1 NC_010803.1 TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: plt:Plut_2097 ATP synthase F0, C subunit; ATP synthase F0 subunit C 2729733 6355109 Clim_2490 Chlorobium limicola DSM 245 ATP synthase F0 subunit C YP_001944488.1 2729512 R 290315 CDS YP_001944489.1 189347960 6355111 complement(2730876..2731295) 1 NC_010803.1 KEGG: plt:Plut_2099 hypothetical protein; hypothetical protein 2731295 6355111 Clim_2492 Chlorobium limicola DSM 245 hypothetical protein YP_001944489.1 2730876 R 290315 CDS YP_001944490.1 189347961 6355112 complement(2731303..2731557) 1 NC_010803.1 KEGG: pvi:Cvib_1745 hypothetical protein; hypothetical protein 2731557 6355112 Clim_2493 Chlorobium limicola DSM 245 hypothetical protein YP_001944490.1 2731303 R 290315 CDS YP_001944491.1 189347962 6355113 2731844..2732599 1 NC_010803.1 PFAM: protein of unknown function DUF152; KEGG: cph:Cpha266_2712 protein of unknown function DUF152; hypothetical protein 2732599 6355113 Clim_2494 Chlorobium limicola DSM 245 hypothetical protein YP_001944491.1 2731844 D 290315 CDS YP_001944492.1 189347963 6355114 complement(2732586..2732798) 1 NC_010803.1 KEGG: cte:CT0027 hypothetical protein; hypothetical protein 2732798 6355114 Clim_2495 Chlorobium limicola DSM 245 hypothetical protein YP_001944492.1 2732586 R 290315 CDS YP_001944493.1 189347964 6355115 2733001..2734020 1 NC_010803.1 TIGRFAM: C-20 methyltransferase BchU; PFAM: O-methyltransferase family 2; KEGG: cph:Cpha266_2714 O-methyltransferase, family 2; C-20 methyltransferase BchU 2734020 6355115 Clim_2496 Chlorobium limicola DSM 245 C-20 methyltransferase BchU YP_001944493.1 2733001 D 290315 CDS YP_001944494.1 189347965 6355116 complement(2734149..2735432) 1 NC_010803.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: cte:CT0029 4-hydroxybutyrate coenzyme A transferase; acetyl-CoA hydrolase/transferase 2735432 6355116 Clim_2497 Chlorobium limicola DSM 245 acetyl-CoA hydrolase/transferase YP_001944494.1 2734149 R 290315 CDS YP_001944495.1 189347966 6355117 complement(2735462..2736754) 1 NC_010803.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 2736754 6355117 Clim_2498 Chlorobium limicola DSM 245 cell division protein FtsZ YP_001944495.1 2735462 R 290315 CDS YP_001944496.1 189347967 6355118 complement(2736799..2738121) 1 NC_010803.1 PFAM: cell division protein FtsA; KEGG: cph:Cpha266_2717 cell division protein FtsA; cell division protein FtsA 2738121 6355118 Clim_2499 Chlorobium limicola DSM 245 cell division protein FtsA YP_001944496.1 2736799 R 290315 CDS YP_001944497.1 189347968 6355119 complement(2738144..2739037) 1 NC_010803.1 PFAM: Polypeptide-transport-associated domain protein FtsQ-type; KEGG: cph:Cpha266_2718 polypeptide-transport-associated domain protein, FtsQ-type; polypeptide-transport-associated domain-containing protein 2739037 6355119 Clim_2500 Chlorobium limicola DSM 245 polypeptide-transport-associated domain-containing protein YP_001944497.1 2738144 R 290315 CDS YP_001944498.1 189347969 6355120 complement(2739202..2740602) 1 NC_010803.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 2740602 murC 6355120 murC Chlorobium limicola DSM 245 UDP-N-acetylmuramate--L-alanine ligase YP_001944498.1 2739202 R 290315 CDS YP_001944499.1 189347970 6355121 complement(2740613..2741707) 1 NC_010803.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 2741707 murG 6355121 murG Chlorobium limicola DSM 245 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_001944499.1 2740613 R 290315 CDS YP_001944500.1 189347971 6355122 complement(2741704..2742909) 1 NC_010803.1 PFAM: cell cycle protein; KEGG: cph:Cpha266_2722 cell cycle protein; cell cycle protein 2742909 6355122 Clim_2503 Chlorobium limicola DSM 245 cell cycle protein YP_001944500.1 2741704 R 290315 CDS YP_001944501.1 189347972 6355123 complement(2742903..2744300) 1 NC_010803.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 2744300 murD 6355123 murD Chlorobium limicola DSM 245 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_001944501.1 2742903 R 290315 CDS YP_001944502.1 189347973 6355124 complement(2744302..2745408) 1 NC_010803.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 2745408 mraY 6355124 mraY Chlorobium limicola DSM 245 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_001944502.1 2744302 R 290315 CDS YP_001944503.1 189347974 6355125 complement(2745422..2746843) 1 NC_010803.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: cph:Cpha266_2725 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase 2746843 6355125 Clim_2506 Chlorobium limicola DSM 245 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase YP_001944503.1 2745422 R 290315 CDS YP_001944504.1 189347975 6355126 complement(2746840..2748402) 1 NC_010803.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: cph:Cpha266_2726 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; UDP-N-acetylmuramyl tripeptide synthetase 2748402 6355126 Clim_2507 Chlorobium limicola DSM 245 UDP-N-acetylmuramyl tripeptide synthetase YP_001944504.1 2746840 R 290315 CDS YP_001944505.1 189347976 6355127 complement(2748399..2750420) 1 NC_010803.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; KEGG: cph:Cpha266_2727 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 2750420 6355127 Clim_2508 Chlorobium limicola DSM 245 peptidoglycan glycosyltransferase YP_001944505.1 2748399 R 290315 CDS YP_001944506.1 189347977 6355128 complement(2750451..2750933) 1 NC_010803.1 KEGG: cph:Cpha266_2728 hypothetical protein; hypothetical protein 2750933 6355128 Clim_2509 Chlorobium limicola DSM 245 hypothetical protein YP_001944506.1 2750451 R 290315 CDS YP_001944507.1 189347978 6355129 complement(2750944..2751912) 1 NC_010803.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: cph:Cpha266_2729 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 2751912 6355129 Clim_2510 Chlorobium limicola DSM 245 S-adenosyl-methyltransferase MraW YP_001944507.1 2750944 R 290315 CDS YP_001944508.1 189347979 6355130 complement(2751917..2752402) 1 NC_010803.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 2752402 6355130 Clim_2511 Chlorobium limicola DSM 245 cell division protein MraZ YP_001944508.1 2751917 R 290315 CDS YP_001944509.1 189347980 6355131 2752627..2753121 1 NC_010803.1 KEGG: cph:Cpha266_2731 hypothetical protein; hypothetical protein 2753121 6355131 Clim_2512 Chlorobium limicola DSM 245 hypothetical protein YP_001944509.1 2752627 D 290315 CDS YP_001944510.1 189347981 6355132 2753199..2753522 1 NC_010803.1 PFAM: Chorismate mutase; KEGG: cph:Cpha266_2732 chorismate mutase; Chorismate mutase 2753522 6355132 Clim_2513 Chlorobium limicola DSM 245 Chorismate mutase YP_001944510.1 2753199 D 290315 CDS YP_001944511.1 189347982 6355133 2753540..2754553 1 NC_010803.1 PFAM: aminodeoxychorismate lyase; KEGG: cph:Cpha266_2733 aminodeoxychorismate lyase; aminodeoxychorismate lyase 2754553 6355133 Clim_2514 Chlorobium limicola DSM 245 aminodeoxychorismate lyase YP_001944511.1 2753540 D 290315 CDS YP_001944512.1 189347983 6355134 2754648..2755841 1 NC_010803.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 2755841 pgk 6355134 pgk Chlorobium limicola DSM 245 phosphoglycerate kinase YP_001944512.1 2754648 D 290315 CDS YP_001944513.1 189347984 6355135 2755889..2756719 1 NC_010803.1 PFAM: Rhomboid family protein; KEGG: cph:Cpha266_2735 rhomboid family protein; rhomboid family protein 2756719 6355135 Clim_2516 Chlorobium limicola DSM 245 rhomboid family protein YP_001944513.1 2755889 D 290315 CDS YP_001944514.1 189347985 6355136 2756752..2757204 1 NC_010803.1 PFAM: protein of unknown function DUF1232; KEGG: plt:Plut_2125 hypothetical protein; hypothetical protein 2757204 6355136 Clim_2517 Chlorobium limicola DSM 245 hypothetical protein YP_001944514.1 2756752 D 290315 CDS YP_001944515.1 189347986 6355137 complement(2757198..2758646) 1 NC_010803.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: RNA methylase; deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; KEGG: cte:CT0009 RNA methyltransferase, TrmA family; RNA methyltransferase, TrmA family 2758646 6355137 Clim_2518 Chlorobium limicola DSM 245 RNA methyltransferase, TrmA family YP_001944515.1 2757198 R 290315 CDS YP_001944516.1 189347987 6355138 complement(2758649..2759563) 1 NC_010803.1 PFAM: ROK family protein; KEGG: cph:Cpha266_2738 N-acetylglucosamine kinase; ROK family protein 2759563 6355138 Clim_2519 Chlorobium limicola DSM 245 ROK family protein YP_001944516.1 2758649 R 290315 CDS YP_001944517.1 189347988 6355139 complement(2759566..2760159) 1 NC_010803.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: pvi:Cvib_1770 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 2760159 6355139 Clim_2520 Chlorobium limicola DSM 245 PA-phosphatase-like phosphoesterase YP_001944517.1 2759566 R 290315 CDS YP_001944518.1 189347989 6355140 complement(2760166..2761917) 1 NC_010803.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: cph:Cpha266_2740 protein translocase subunit YidC; 60 kDa inner membrane insertion protein 2761917 6355140 Clim_2521 Chlorobium limicola DSM 245 60 kDa inner membrane insertion protein YP_001944518.1 2760166 R 290315 CDS YP_001944519.1 189347990 6355141 complement(2761910..2762194) 1 NC_010803.1 PFAM: protein of unknown function DUF37; KEGG: cph:Cpha266_2741 protein of unknown function DUF37; hypothetical protein 2762194 6355141 Clim_2522 Chlorobium limicola DSM 245 hypothetical protein YP_001944519.1 2761910 R 290315 CDS YP_001944520.1 189347991 6355142 complement(2762267..2762677) 1 NC_010803.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 2762677 rnpA 6355142 rnpA Chlorobium limicola DSM 245 ribonuclease P YP_001944520.1 2762267 R 290315 CDS YP_001944521.1 189347992 6355143 complement(2762740..2762901) 1 NC_010803.1 PFAM: ribosomal protein L34; KEGG: plt:Plut_2132 50S ribosomal protein L34; 50S ribosomal protein L34 2762901 6355143 Clim_2524 Chlorobium limicola DSM 245 50S ribosomal protein L34 YP_001944521.1 2762740 R 290315 CDS