-- dump date   	20140619_041446
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_001633648.1	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.
YP_001633649.1	PFAM: AMP-dependent synthetase and ligase; KEGG: mpt:Mpe_A2513 PrpE protein ligase (putative propionyl-CoA synthetase)
YP_001633650.1	TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: rca:Rcas_3935 acetate--CoA ligase
YP_001633651.1	PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_3893 protein kinase
YP_001633652.1	TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; KEGG: rrs:RoseRS_2181 GTP-binding protein Era
YP_001633653.1	PFAM: protein of unknown function UPF0118; KEGG: rrs:RoseRS_1556 protein of unknown function UPF0118
YP_001633654.1	works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell
YP_001633655.1	TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rca:Rcas_3409 septum site-determining protein MinD
YP_001633656.1	TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; KEGG: rrs:RoseRS_1559 septum site-determining protein MinC
YP_001633657.1	KEGG: rca:Rcas_2314 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase
YP_001633658.1	PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_1225 major facilitator superfamily MFS_1
YP_001633659.1	PFAM: regulatory protein ArsR; KEGG: rca:Rcas_3618 transcriptional regulator, ArsR family
YP_001633660.1	TIGRFAM: redox-active disulfide protein 2; KEGG: rca:Rcas_3619 redox-active disulfide protein 2
YP_001633661.1	PFAM: permease; KEGG: rca:Rcas_3620 permease
YP_001633663.1	PFAM: protein of unknown function DUF574; KEGG: rrs:RoseRS_1762 protein of unknown function DUF574
YP_001633664.1	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: gur:Gura_0350 phosphonate ABC transporter, periplasmic phosphonate-binding protein
YP_001633665.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: dsy:DSY4128 hypothetical protein
YP_001633666.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: sth:STH3220 two-component response regulator
YP_001633667.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: deb:DehaBAV1_0265 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_001633668.1	PFAM: Polysulphide reductase NrfD; KEGG: det:DET0102 molybdopterin oxidoreductase, membrane subunit, putative
YP_001633669.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: deh:cbdb_A118 molybdopterin oxidoreductase
YP_001633670.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: mca:MCA0351 carboxymuconolactone decarboxylase domain protein
YP_001633671.1	KEGG: rca:Rcas_2175 formylmethanofuran dehydrogenase subunit E region
YP_001633672.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rrs:RoseRS_2111 iron-sulfur cluster assembly accessory protein
YP_001633673.1	TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; KEGG: rca:Rcas_4304 protoheme IX farnesyltransferase
YP_001633675.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: rca:Rcas_3221 response regulator receiver modulated diguanylate cyclase
YP_001633676.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rca:Rcas_3224 alcohol dehydrogenase GroES domain protein
YP_001633677.1	TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: rrs:RoseRS_3920 methionyl-tRNA formyltransferase
YP_001633678.1	KEGG: rca:Rcas_0831 hypothetical protein
YP_001633679.1	KEGG: rrs:RoseRS_4479 hypothetical protein
YP_001633680.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: rca:Rcas_2771 phospholipid/glycerol acyltransferase
YP_001633681.1	KEGG: rrs:RoseRS_2830 hypothetical protein
YP_001633682.1	PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: mxa:MXAN_2845 conserved hypothetical protein TIGR00257
YP_001633683.1	KEGG: rrs:RoseRS_2063 hypothetical protein
YP_001633684.1	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis
YP_001633685.1	PFAM: cobalamin B12-binding domain protein; KEGG: rca:Rcas_2998 cobalamin B12-binding domain protein
YP_001633686.1	TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_2025 LAO/AO transport system ATPase
YP_001633687.1	PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: rca:Rcas_1218 phosphomannomutase
YP_001633688.1	KEGG: rrs:RoseRS_2617 hypothetical protein
YP_001633689.1	PFAM: protein of unknown function DUF407; KEGG: rrs:RoseRS_2616 protein of unknown function DUF407
YP_001633690.1	PFAM: periplasmic binding protein; KEGG: rca:Rcas_2937 periplasmic binding protein
YP_001633691.1	PFAM: protein of unknown function DUF547; KEGG: gur:Gura_3347 protein of unknown function DUF547
YP_001633692.1	KEGG: gur:Gura_0093 hypothetical protein
YP_001633693.1	KEGG: bbr:BB4888 putative reductase
YP_001633694.1	KEGG: rca:Rcas_2036 hypothetical protein
YP_001633695.1	KEGG: rrs:RoseRS_2582 hypothetical protein
YP_001633696.1	PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: vha:VIBHAR_01393 hypothetical protein
YP_001633697.1	PFAM: glycoside hydrolase family 57; Domain of unknown function DUF1957; KEGG: rrs:RoseRS_3734 glycoside hydrolase, family 57
YP_001633698.1	PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rca:Rcas_1479 serine/threonine protein kinase
YP_001633699.1	PFAM: Forkhead-associated protein; transcriptional regulator domain protein; KEGG: rca:Rcas_1480 putative two component transcriptional regulator, winged helix family
YP_001633700.1	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis
YP_001633701.1	KEGG: rca:Rcas_1482 hypothetical protein
YP_001633702.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: rca:Rcas_2654 UDP-glucose 4-epimerase
YP_001633703.1	PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rca:Rcas_4117 serine/threonine protein kinase
YP_001633704.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rrs:RoseRS_1835 ATPase associated with various cellular activities, AAA_3
YP_001633705.1	PFAM: protein of unknown function DUF214; KEGG: rca:Rcas_1858 protein of unknown function DUF214
YP_001633706.1	PFAM: acyl-coA-binding protein ACBP; KEGG: rrs:RoseRS_0103 acyl-coA-binding protein, ACBP
YP_001633707.1	PFAM: RNP-1 like RNA-binding protein; KEGG: mca:MCA1010 RNA-binding protein
YP_001633708.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Contains selenocysteine; KEGG: gvi:glr0029 hypothetical protein
YP_001633709.1	KEGG: rca:Rcas_1013 hypothetical protein
YP_001633710.1	TIGRFAM: CRISPR-associated autoregulator DevR family; PFAM: CRISPR-associated regulatory Csa2 family protein; KEGG: rca:Rcas_1012 CRISPR-associated autoregulator, DevR family
YP_001633711.1	KEGG: rca:Rcas_1011 hypothetical protein
YP_001633712.1	KEGG: rca:Rcas_1011 hypothetical protein
YP_001633713.1	KEGG: rca:Rcas_1010 CRISPR-associated helicase Cas3; TIGRFAM: CRISPR-associated helicase Cas3; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases
YP_001633714.1	KEGG: rca:Rcas_1009 regulatory protein, DeoR
YP_001633715.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_001633716.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: sus:Acid_3454 tetratricopeptide TPR_4
YP_001633717.1	PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: gvi:gll3709 polysaccharide transporter, PST family
YP_001633718.1	PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: rrs:RoseRS_0743 D12 class N6 adenine-specific DNA methyltransferase
YP_001633719.1	KEGG: rrs:RoseRS_0742 hypothetical protein
YP_001633720.1	PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3120 glycosyl transferase, group 1
YP_001633722.1	PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_0463 glycosyl transferase family 2
YP_001633723.1	TIGRFAM: conserved repeat domain protein; KEGG: sat:SYN_01127 RTX family of calcium-binding proteins
YP_001633724.1	KEGG: rca:Rcas_0440 hypothetical protein
YP_001633725.1	PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: rrs:RoseRS_0950 citrate transporter
YP_001633726.1	PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: rrs:RoseRS_2550 PHP C-terminal domain protein
YP_001633727.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_4314 glycosyl transferase group 1
YP_001633728.1	PFAM: protein of unknown function DUF309; KEGG: rca:Rcas_1756 protein of unknown function DUF309
YP_001633729.1	KEGG: rrs:RoseRS_1605 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001633730.1	PFAM: alpha/beta hydrolase fold; KEGG: gka:GK2874 hypothetical protein
YP_001633733.1	KEGG: rrs:RoseRS_1736 PBS lyase heat domain protein repeat-containing protein
YP_001633734.1	PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; SMART: Armadillo domain protein; AAA ATPase; KEGG: rrs:RoseRS_1736 PBS lyase heat domain protein repeat-containing protein
YP_001633735.1	KEGG: rrs:RoseRS_1736 PBS lyase heat domain protein repeat-containing protein
YP_001633737.1	TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gtn:GTNG_2771 naphthoate synthase
YP_001633738.1	TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: rca:Rcas_2084 1,4-dihydroxy-2-naphthoate octaprenyltransferase
YP_001633739.1	TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: gka:GK2872 O-succinylbenzoic acid--CoA ligase
YP_001633740.1	PFAM: protein of unknown function DUF1405; KEGG: rca:Rcas_3542 protein of unknown function DUF1405
YP_001633741.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: rca:Rcas_3543 transferase hexapeptide repeat containing protein
YP_001633742.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: rxy:Rxyl_2850 transcriptional regulator, IclR family
YP_001633743.1	PFAM: iron dependent repressor; FeoA family protein; KEGG: rca:Rcas_3322 iron (metal) dependent repressor, DtxR family
YP_001633744.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rle:RL0373 putative enoyl-CoA hydratase
YP_001633745.1	KEGG: ppd:Ppro_2908 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001633746.1	KEGG: slo:Shew_0499 Xaa-Pro aminopeptidase family enzyme
YP_001633747.1	PFAM: major facilitator superfamily MFS_1; KEGG: rca:Rcas_2058 major facilitator superfamily MFS_1
YP_001633748.1	PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4045 glycosyl transferase, group 1
YP_001633749.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: rca:Rcas_3666 lipopolysaccharide biosynthesis protein
YP_001633750.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: rrs:RoseRS_4043 lipopolysaccharide biosynthesis protein
YP_001633751.1	TIGRFAM: capsular exopolysaccharide family; KEGG: rca:Rcas_3668 non-specific protein-tyrosine kinase
YP_001633752.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rca:Rcas_1176 two component transcriptional regulator, winged helix family
YP_001633753.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0804 integral membrane sensor signal transduction histidine kinase
YP_001633754.1	KEGG: rrs:RoseRS_3211 hypothetical protein
YP_001633755.1	KEGG: rrs:RoseRS_3211 hypothetical protein
YP_001633756.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: rca:Rcas_1673 peptidoglycan glycosyltransferase
YP_001633757.1	KEGG: rca:Rcas_1672 hypothetical protein
YP_001633758.1	in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall
YP_001633759.1	functions in MreBCD complex in some organisms
YP_001633760.1	KEGG: mba:Mbar_A1776 magnesium-chelatase subunit; PFAM: magnesium chelatase ChlI subunit; von Willebrand factor type A; SMART: AAA ATPase
YP_001633761.1	PFAM: RNA binding S1 domain protein; KEGG: rrs:RoseRS_3968 RNA binding S1 domain protein
YP_001633762.1	PFAM: ribosomal protein L34; KEGG: rca:Rcas_1423 ribosomal protein L34
YP_001633763.1	TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: rca:Rcas_1424 ribonuclease P protein component
YP_001633764.1	PFAM: 60 kDa inner membrane insertion protein; KEGG: rrs:RoseRS_3965 60 kDa inner membrane insertion protein
YP_001633765.1	PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: rrs:RoseRS_3964 single-stranded nucleic acid binding R3H domain protein
YP_001633766.1	PFAM: globin; KEGG: rrs:RoseRS_0783 globin
YP_001633767.1	KEGG: tte:TTE1925 hypothetical protein
YP_001633768.1	KEGG: plt:Plut_1173 anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase
YP_001633769.1	PFAM: bacteriochlorophyll C binding protein
YP_001633771.1	KEGG: plt:Plut_0266 hypothetical protein
YP_001633772.1	PFAM: Anion-transporting ATPase; KEGG: cch:Cag_1412 anion-transporting ATPase
YP_001633773.1	PFAM: Anion-transporting ATPase; KEGG: rca:Rcas_0926 ATPase involved in chromosome partitioning-like protein
YP_001633774.1	PFAM: alpha/beta hydrolase fold; KEGG: pvi:Cvib_1124 alpha/beta hydrolase fold
YP_001633777.1	KEGG: tel:tlr1982 probable lipase
YP_001633778.1	KEGG: tel:tlr1982 probable lipase
YP_001633780.1	TIGRFAM: C-20 methyltransferase BchU; PFAM: O-methyltransferase family 2; KEGG: cte:CT0028 CrtF-related protein
YP_001633781.1	TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: cch:Cag_1538 bacteriochlorophyll a synthase
YP_001633784.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bcy:Bcer98_3646 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001633785.1	KEGG: ter:Tery_0501 hypothetical protein
YP_001633787.1	PFAM: helix-turn-helix domain protein; peptidase M23B; KEGG: rrs:RoseRS_2287 peptidase M23B
YP_001633788.1	PFAM: ABC-2 type transporter; KEGG: mth:MTH1092 ABC-2 type transport system permease protein
YP_001633789.1	KEGG: mem:Memar_0243 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001633790.1	KEGG: rrs:RoseRS_3147 hypothetical protein
YP_001633791.1	KEGG: fno:Fnod_0510 protein of unknown function DUF450
YP_001633792.1	KEGG: rrs:RoseRS_3857 amino acid permease-associated region
YP_001633793.1	PFAM: PfkB domain protein; KEGG: rrs:RoseRS_3963 PfkB domain protein
YP_001633794.1	PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_1941 alpha/beta hydrolase fold
YP_001633795.1	KEGG: rca:Rcas_0051 hypothetical protein
YP_001633796.1	KEGG: sfu:Sfum_3916 dual specificity protein phosphatase
YP_001633797.1	KEGG: rrs:RoseRS_3314 hypothetical protein
YP_001633798.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rxy:Rxyl_2574 methyltransferase type 12
YP_001633799.1	TIGRFAM: dihydroneopterin aldolase; KEGG: rxy:Rxyl_2579 dihydroneopterin aldolase
YP_001633800.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: rxy:Rxyl_2578 riboflavin-specific deaminase-like protein
YP_001633801.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: rxy:Rxyl_2577 alcohol dehydrogenase, zinc-binding protein
YP_001633802.1	PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: rxy:Rxyl_2576 6-pyruvoyl tetrahydropterin synthase and hypothetical protein
YP_001633803.1	PFAM: glycosyl transferase group 1; KEGG: rxy:Rxyl_2575 glycosyl transferase, group 1
YP_001633804.1	KEGG: rca:Rcas_4165 hypothetical protein
YP_001633805.1	KEGG: ret:RHE_CH02020 hypothetical protein
YP_001633806.1	TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rca:Rcas_1557 acetolactate synthase, large subunit, biosynthetic type
YP_001633807.1	TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: rrs:RoseRS_1967 acetolactate synthase, small subunit
YP_001633808.1	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis
YP_001633809.1	TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: rrs:RoseRS_1965 2-isopropylmalate synthase
YP_001633810.1	PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: rrs:RoseRS_1964 prephenate dehydratase
YP_001633811.1	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
YP_001633812.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
YP_001633813.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: nfa:nfa9670 putative dihydrolipoamide dehydrogenase
YP_001633814.1	PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: rca:Rcas_0508 peptidoglycan glycosyltransferase
YP_001633815.1	KEGG: rrs:RoseRS_0867 hypothetical protein
YP_001633816.1	PFAM: MaoC domain protein dehydratase; KEGG: rca:Rcas_0913 MaoC domain protein dehydratase
YP_001633817.1	PFAM: HpcH/HpaI aldolase; KEGG: rrs:RoseRS_4173 HpcH/HpaI aldolase
YP_001633818.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rrs:RoseRS_4174 acyl-CoA transferase/carnitine dehydratase-like protein
YP_001633821.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rca:Rcas_0910 L-carnitine dehydratase/bile acid-inducible protein F
YP_001633822.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rca:Rcas_0909 L-carnitine dehydratase/bile acid-inducible protein F
YP_001633823.1	KEGG: rrs:RoseRS_4177 hypothetical protein
YP_001633824.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rrs:RoseRS_4179 protein of unknown function DUF224, cysteine-rich region domain protein
YP_001633825.1	KEGG: rrs:RoseRS_4180 hypothetical protein
YP_001633826.1	TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: rca:Rcas_4385 formate dehydrogenase family accessory protein FdhD
YP_001633827.1	TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: rrs:RoseRS_4018 oxidoreductase alpha (molybdopterin) subunit
YP_001633829.1	PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_0683 glycosyl transferase, group 1
YP_001633830.1	PFAM: ThiJ/PfpI domain protein; KEGG: rrs:RoseRS_2580 ThiJ/PfpI domain protein
YP_001633831.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dar:Daro_3508 PAS:GGDEF
YP_001633832.1	KEGG: rrs:RoseRS_1536 hypothetical protein
YP_001633833.1	KEGG: cya:CYA_0515 hypothetical protein
YP_001633834.1	KEGG: gme:Gmet_2788 histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001633835.1	catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate
YP_001633836.1	PFAM: ABC-3 protein; KEGG: rca:Rcas_1721 transcriptional regulator, MarR family
YP_001633837.1	PFAM: transport system permease protein; ABC-3 protein; KEGG: rca:Rcas_1722 ABC-3 protein
YP_001633838.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3069 ABC transporter related
YP_001633839.1	PFAM: periplasmic solute binding protein; KEGG: rrs:RoseRS_3070 periplasmic solute binding protein
YP_001633840.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bce:BC2064 ribosomal-protein-alanine acetyltransferase
YP_001633842.1	KEGG: rca:Rcas_4132 hypothetical protein
YP_001633843.1	TIGRFAM: autotransporter-associated beta strand repeat protein; PFAM: Ig domain protein group 1 domain protein; Ig family protein; KEGG: spu:761405 hypothetical protein LOC761405
YP_001633844.1	TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: mms:mma_3532 transporter of the DMT superfamily, chloramphenicol-sensitivity protein (RarD family)
YP_001633845.1	PFAM: protein of unknown function DUF121; KEGG: rxy:Rxyl_0959 protein of unknown function DUF121
YP_001633846.1	catalyzes the formation of the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) and GMP from actyl (2) diphospho-(5')guanosine (LPPG) to 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO)
YP_001633847.1	PFAM: Thioredoxin domain; KEGG: rrs:RoseRS_1818 thioredoxin
YP_001633848.1	KEGG: rrs:RoseRS_4071 hypothetical protein
YP_001633849.1	PFAM: TrkA-N domain protein; TrkA-C domain protein; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: cyb:CYB_1337 K+ transporter, trk family
YP_001633850.1	PFAM: cation transporter; KEGG: rrs:RoseRS_2088 H(+)-transporting two-sector ATPase
YP_001633851.1	KEGG: rrs:RoseRS_3875 putative oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_001633852.1	TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; dihydroorotate dehydrogenase; KEGG: rrs:RoseRS_0864 putative TIM-barrel protein, nifR3 family
YP_001633853.1	TIGRFAM: polymorphic outer membrane protein; PFAM: Polymorphic membrane protein Chlamydia; KEGG: rca:Rcas_2873 polymorphic outer membrane protein
YP_001633855.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: rrs:RoseRS_2705 phospholipid/glycerol acyltransferase
YP_001633856.1	PFAM: protein of unknown function DUF422; KEGG: rrs:RoseRS_2706 protein of unknown function DUF422
YP_001633857.1	PFAM: response regulator receiver; KEGG: rca:Rcas_1967 response regulator receiver protein
YP_001633859.1	KEGG: mka:MK1389 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region
YP_001633860.1	KEGG: rrs:RoseRS_1087 hypothetical protein
YP_001633861.1	PFAM: Rare lipoprotein A; KEGG: rca:Rcas_2307 rare lipoprotein A
YP_001633862.1	TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: dge:Dgeo_1084 oligoendopeptidase F
YP_001633863.1	PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: vco:VC0395_1082 putative potassium channel protein
YP_001633864.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rba:RB5051 conserved hypothetical protein-putative thioredoxin reductase
YP_001633865.1	KEGG: rrs:RoseRS_2756 hypothetical protein
YP_001633866.1	PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_2506 major facilitator superfamily MFS_1
YP_001633867.1	PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; KEGG: rca:Rcas_1187 beta-lactamase domain protein
YP_001633868.1	PFAM: SirA family protein; KEGG: rrs:RoseRS_0815 SirA family protein
YP_001633869.1	KEGG: rca:Rcas_1185 hypothetical protein
YP_001633870.1	PFAM: Rhodanese domain protein; KEGG: rrs:RoseRS_2962 rhodanese domain protein
YP_001633871.1	PFAM: protein of unknown function DUF442; KEGG: rrs:RoseRS_0813 protein of unknown function DUF442
YP_001633872.1	TIGRFAM: sulfate transporter; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: rrs:RoseRS_0812 sulfate transporter
YP_001633873.1	PFAM: Rhodanese domain protein; KEGG: rrs:RoseRS_2962 rhodanese domain protein
YP_001633874.1	PFAM: protein of unknown function DUF35; KEGG: rca:Rcas_0984 protein of unknown function DUF35
YP_001633875.1	KEGG: rrs:RoseRS_2432 hypothetical protein
YP_001633876.1	KEGG: rca:Rcas_0983 acetyl-CoA acetyltransferase-like protein
YP_001633877.1	TIGRFAM: hydroxymethylglutaryl-CoA synthase; PFAM: Hydroxymethylglutaryl-coenzyme A synthase domain; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: rca:Rcas_0982 putative hydroxymethylglutaryl-CoA synthase
YP_001633878.1	TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative; KEGG: rca:Rcas_0981 hydroxymethylglutaryl-CoA reductase, degradative
YP_001633879.1	KEGG: rrs:RoseRS_0432 hypothetical protein
YP_001633880.1	KEGG: sfu:Sfum_1007 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001633881.1	KEGG: rca:Rcas_0671 putative circadian clock protein, KaiC; PFAM: Circadian clock protein KaiC central region; KaiA binding; SMART: AAA ATPase
YP_001633882.1	PFAM: creatinase; peptidase M24; KEGG: sth:STH1865 Xaa-Pro dipeptidase
YP_001633883.1	KEGG: rca:Rcas_0877 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase
YP_001633884.1	KEGG: rca:Rcas_2266 hypothetical protein
YP_001633885.1	KEGG: mta:Moth_2503 selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3
YP_001633886.1	PFAM: HhH-GPD family protein; KEGG: sus:Acid_6307 DNA-3-methyladenine glycosylase II
YP_001633887.1	KEGG: rrs:RoseRS_2001 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
YP_001633888.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_1999 tetratricopeptide TPR_2 repeat protein
YP_001633889.1	KEGG: rca:Rcas_2319 UV damage repair endonuclease-like protein
YP_001633890.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: rrs:RoseRS_2438 peptidylprolyl isomerase
YP_001633891.1	PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: rca:Rcas_2308 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein
YP_001633892.1	catalyzes the coenzyme A-dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin
YP_001633893.1	KEGG: rrs:RoseRS_2439 hypothetical protein
YP_001633894.1	KEGG: rrs:RoseRS_2440 hypothetical protein
YP_001633895.1	KEGG: rca:Rcas_2219 putative FHA domain containing protein
YP_001633896.1	KEGG: rca:Rcas_2220 hypothetical protein
YP_001633897.1	KEGG: rrs:RoseRS_2443 hypothetical protein
YP_001633900.1	PFAM: phosphofructokinase; KEGG: gme:Gmet_1640 phosphofructokinase, pyrophosphate dependent
YP_001633901.1	required for 70S ribosome assembly
YP_001633902.1	PFAM: DegV family protein; KEGG: rca:Rcas_0603 DegV family protein
YP_001633903.1	catalyzes branch migration in Holliday junction intermediates
YP_001633904.1	PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: rrs:RoseRS_1675 catalytic domain of components of various dehydrogenase complexes
YP_001633905.1	KEGG: rrs:RoseRS_4154 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001633906.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sru:SRU_2295 phosphate ABC transporter, permease protein PstA
YP_001633907.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: syf:Synpcc7942_2443 phosphate ABC transporter, permease protein PstC
YP_001633908.1	TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_4157 phosphate binding protein
YP_001633909.1	KEGG: rrs:RoseRS_2393 polymorphic outer membrane protein
YP_001633910.1	PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: rrs:RoseRS_2175 N-acetylmuramoyl-L-alanine amidase, family 2
YP_001633911.1	PFAM: Integral membrane protein TerC; KEGG: gvi:glr4409 putative transmembrane transport protein
YP_001633912.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: rca:Rcas_4451 signal transduction histidine kinase
YP_001633913.1	PFAM: ABC-2 type transporter; KEGG: rca:Rcas_0420 ABC-2 type transporter
YP_001633914.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_4617 ABC transporter related
YP_001633915.1	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis
YP_001633916.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
YP_001633917.1	PFAM: protein of unknown function DUF124; KEGG: rca:Rcas_3709 protein of unknown function DUF124
YP_001633918.1	PFAM: Roadblock/LC7 family protein; KEGG: rrs:RoseRS_0746 roadblock/LC7 family protein
YP_001633919.1	PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_0747 extracellular solute-binding protein, family 1
YP_001633920.1	TIGRFAM: phosphoheptose isomerase; KEGG: wsu:WS0681 phosphoheptose isomerase
YP_001633921.1	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate
YP_001633922.1	KEGG: wsu:WS0992 hypothetical protein
YP_001633923.1	PFAM: helix-turn-helix Fis-type
YP_001633924.1	PFAM: zinc finger CHC2-family protein; KEGG: fra:Francci3_3307 zinc finger, CHC2-type
YP_001633925.1	KEGG: dvl:Dvul_0087 toprim sub domain protein
YP_001633929.1	KEGG: ana:alr9504 unknown protein
YP_001633931.1	KEGG: xau:Xaut_0314 putative transcriptional regulator, XRE family
YP_001633932.1	PFAM: Resolvase domain; Recombinase; KEGG: bja:bll1959 DNA invertase
YP_001633933.1	PFAM: Vitamin K epoxide reductase; KEGG: rrs:RoseRS_0493 vitamin K epoxide reductase
YP_001633934.1	KEGG: ava:Ava_4725 polymorphic membrane protein
YP_001633935.1	KEGG: rrs:RoseRS_1018 hypothetical protein
YP_001633936.1	KEGG: rca:Rcas_0402 hypothetical protein
YP_001633937.1	KEGG: mlo:mlr7467 hypothetical protein
YP_001633938.1	TIGRFAM: polymorphic outer membrane protein; PFAM: Polymorphic membrane protein Chlamydia; KEGG: rrs:RoseRS_4272 hypothetical protein
YP_001633939.1	KEGG: aba:Acid345_2296 hypothetical protein
YP_001633941.1	TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: deb:DehaBAV1_1257 2'-5' RNA ligase
YP_001633942.1	PFAM: DSBA oxidoreductase; KEGG: rca:Rcas_3717 DsbA oxidoreductase
YP_001633943.1	KEGG: rca:Rcas_2557 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001633944.1	KEGG: rrs:RoseRS_2779 molecular chaperone (small heat shock protein)-like protein
YP_001633946.1	KEGG: rca:Rcas_2941 hypothetical protein
YP_001633947.1	KEGG: rca:Rcas_1750 2-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein
YP_001633948.1	PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: rrs:RoseRS_3094 chaperone DnaJ domain protein
YP_001633949.1	KEGG: cya:CYA_1262 hypothetical protein
YP_001633950.1	KEGG: rca:Rcas_1373 hypothetical protein
YP_001633951.1	PFAM: band 7 protein; KEGG: rca:Rcas_2987 band 7 protein
YP_001633952.1	PFAM: periplasmic binding protein; KEGG: rrs:RoseRS_3086 periplasmic binding protein
YP_001633953.1	KEGG: rrs:RoseRS_3087 ferredoxin-like protein
YP_001633954.1	PFAM: transport system permease protein; KEGG: rrs:RoseRS_3088 transport system permease protein
YP_001633955.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3089 ABC transporter related
YP_001633956.1	KEGG: rrs:RoseRS_3090 hypothetical protein
YP_001633958.1	PFAM: periplasmic binding protein; KEGG: ana:alr2583 iron(III) dicitrate transport system substrate-binding protein
YP_001633960.1	TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: cyb:CYB_2267 flavodoxin
YP_001633961.1	KEGG: bcl:ABC0821 restriction endonuclease R XbaI
YP_001633962.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bcl:ABC0822 adenine-specific DNA methylase
YP_001633963.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: hma:rrnAC0908 spermidine/putrescine ABC transporter ATP-binding protein
YP_001633964.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hha:Hhal_1189 binding-protein-dependent transport systems inner membrane component
YP_001633965.1	PFAM: extracellular solute-binding protein family 1; KEGG: nmu:Nmul_A0732 extracellular solute-binding protein, family 1
YP_001633966.1	KEGG: rrs:RoseRS_4462 hypothetical protein
YP_001633967.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: rca:Rcas_0816 cupin 2 conserved barrel domain protein
YP_001633968.1	PFAM: pyruvate carboxyltransferase; KEGG: afw:Anae109_2393 homocitrate synthase
YP_001633969.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis
YP_001633970.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis
YP_001633971.1	PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: rrs:RoseRS_1057 3-isopropylmalate dehydrogenase
YP_001633972.1	TIGRFAM: lysine biosynthesis protein LysW; KEGG: rca:Rcas_3470 lysine biosynthesis protein LysW
YP_001633973.1	TIGRFAM: lysine biosynthesis protein LysW; KEGG: rca:Rcas_3470 lysine biosynthesis protein LysW
YP_001633974.1	TIGRFAM: alpha-L-glutamate ligase, RimK family; lysine biosynthesis enzyme LysX; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: rca:Rcas_3469 lysine biosynthesis enzyme LysX
YP_001633975.1	KEGG: rrs:RoseRS_1060 N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region
YP_001633977.1	PFAM: band 7 protein; KEGG: rrs:RoseRS_3855 band 7 protein
YP_001633978.1	PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_1513 ribonuclease III
YP_001633979.1	PFAM: DNA mismatch repair protein MutS domain protein; KEGG: ace:Acel_0734 DNA mismatch repair protein MutS domain protein
YP_001633980.1	PFAM: DNA mismatch repair protein MutS domain protein; KEGG: tpt:Tpet_1786 DNA mismatch repair protein MutS domain protein
YP_001633981.1	KEGG: rrs:RoseRS_3415 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2
YP_001633982.1	PFAM: histone deacetylase superfamily; KEGG: rrs:RoseRS_3190 histone deacetylase superfamily
YP_001633983.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
YP_001633984.1	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide
YP_001633985.1	KEGG: rca:Rcas_2921 hypothetical protein
YP_001633986.1	PFAM: putative RNA methylase; Methyltransferase type 11; KEGG: rrs:RoseRS_2276 putative RNA methylase
YP_001633987.1	KEGG: rca:Rcas_0035 hypothetical protein
YP_001633988.1	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
YP_001633989.1	PFAM: alpha/beta hydrolase fold; KEGG: rxy:Rxyl_2331 hypothetical protein
YP_001633990.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rca:Rcas_2087 GCN5-related N-acetyltransferase
YP_001633991.1	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity
YP_001633992.1	PFAM: RDD domain containing protein; KEGG: rca:Rcas_3447 RDD domain containing protein
YP_001633993.1	PFAM: Phosphoglycerate mutase; KEGG: rca:Rcas_3445 phosphoglycerate mutase
YP_001633994.1	PFAM: thymidylate synthase complementing protein ThyX; KEGG: rrs:RoseRS_0926 thymidylate synthase complementing protein ThyX
YP_001633995.1	PFAM: LmbE family protein; KEGG: rca:Rcas_1525 LmbE family protein
YP_001633996.1	PFAM: ferredoxin; KEGG: cte:CT0652 chlorosome envelope protein X
YP_001633997.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: rxy:Rxyl_2580 phospholipid/glycerol acyltransferase
YP_001633998.1	PFAM: GTP cyclohydrolase II; KEGG: bce:BC4111 GTP cyclohydrolase II
YP_001633999.1	PFAM: glycoside hydrolase family 1; KEGG: sus:Acid_2768 glycoside hydrolase, family 1
YP_001634000.1	PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: kra:Krad_0118 alpha-L-rhamnosidase
YP_001634001.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aau:AAur_0944 putative ABC-type sugar transport system, permease component
YP_001634002.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_0127 binding-protein-dependent transport systems inner membrane component
YP_001634003.1	PFAM: extracellular solute-binding protein family 1; KEGG: aau:AAur_0946 putative extracellular sugar-binding protein
YP_001634004.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rso:RSc1014 probable transcriptional regulatory DNA-binding repressor transcription regulator protein
YP_001634006.1	PFAM: protein of unknown function DUF88; KEGG: mca:MCA1614 cold-shock DNA-binding domain protein
YP_001634007.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rba:RB8188 probable glyoxylate-induced protein
YP_001634008.1	PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; peptidase S41; WD40 domain protein beta Propeller; KEGG: rrs:RoseRS_2312 peptidase S41
YP_001634009.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: rrs:RoseRS_1352 short-chain dehydrogenase/reductase SDR
YP_001634010.1	PFAM: pyruvate carboxyltransferase; KEGG: rrs:RoseRS_4162 pyruvate carboxyltransferase
YP_001634011.1	KEGG: aeh:Mlg_2619 hypothetical protein
YP_001634012.1	TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: sfu:Sfum_1692 phosphomethylpyrimidine kinase
YP_001634013.1	KEGG: mta:Moth_2162 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase
YP_001634014.1	catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP
YP_001634015.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: afm:AFUA_4G14850 extracellular 3-ketosteroid 1-dehydrogenase, putative
YP_001634016.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ttj:TTHA0660 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001634017.1	PFAM: aminoglycoside phosphotransferase; KEGG: afm:AFUA_3G11050 hypothetical protein
YP_001634018.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: rpc:RPC_1611 glycoside hydrolase, family 3-like
YP_001634019.1	PFAM: major facilitator superfamily MFS_1; KEGG: chu:CHU_1068 transport protein, MFS family
YP_001634020.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sde:Sde_3960 transcriptional regulator, LacI family
YP_001634021.1	TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: rrs:RoseRS_1032 translation initiation factor IF-3
YP_001634023.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
YP_001634024.1	PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: rrs:RoseRS_1035 tRNA/rRNA methyltransferase (SpoU)
YP_001634025.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
YP_001634027.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: rca:Rcas_2761 protein of unknown function DUF6 transmembrane
YP_001634028.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMc00267 hypothetical protein
YP_001634030.1	KEGG: rca:Rcas_3733 conserved repeat domain
YP_001634031.1	TIGRFAM: conserved repeat domain protein; SMART: Parallel beta-helix repeat; KEGG: rca:Rcas_3732 parallel beta-helix repeat
YP_001634032.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
YP_001634033.1	PFAM: amidohydrolase 2; KEGG: rrs:RoseRS_2838 amidohydrolase 2
YP_001634034.1	PFAM: protein of unknown function DUF59; KEGG: rca:Rcas_0663 protein of unknown function DUF59
YP_001634035.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: rca:Rcas_3229 molybdenum cofactor synthesis domain
YP_001634036.1	KEGG: rca:Rcas_0802 4-vinyl reductase 4VR
YP_001634037.1	PFAM: protein of unknown function DUF37; KEGG: rrs:RoseRS_3917 protein of unknown function DUF37
YP_001634038.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rca:Rcas_0024 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001634039.1	KEGG: rca:Rcas_0025 putative transmembrane anti-sigma factor
YP_001634041.1	PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE domain protein; PAS fold-4 domain protein; KEGG: ana:alr3120 two-component hybrid sensor and regulator
YP_001634042.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: ttj:TTHB244 phenol hydroxylase component B
YP_001634043.1	KEGG: rrs:RoseRS_1508 hypothetical protein
YP_001634044.1	KEGG: rca:Rcas_3946 hypothetical protein
YP_001634045.1	PFAM: protein of unknown function UPF0044; KEGG: mgm:Mmc1_3700 protein of unknown function UPF0044
YP_001634046.1	PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_1701 glycosyl transferase family 2
YP_001634047.1	PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_1415 glycosyl transferase, family 2
YP_001634048.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rca:Rcas_1699 dTDP-4-dehydrorhamnose reductase
YP_001634049.1	TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: rca:Rcas_3604 putative PAS/PAC sensor protein
YP_001634050.1	KEGG: rrs:RoseRS_2524 hypothetical protein
YP_001634051.1	KEGG: ddi:DDBDRAFT_0184530 colossin A; TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; Thrombospondin type 3 repeat; Cna B domain protein; SMART: Fibronectin type III domain protein
YP_001634052.1	PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_1912 PucC protein
YP_001634053.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rca:Rcas_1535 methyltransferase type 11
YP_001634054.1	PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: rca:Rcas_3748 2-vinyl bacteriochlorophyllide hydratase
YP_001634055.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_3261 alcohol dehydrogenase, zinc-binding domain protein
YP_001634056.1	KEGG: rca:Rcas_3746 chlorophyllide reductase iron protein subunit X; TIGRFAM: chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein
YP_001634057.1	PFAM: protein of unknown function DUF169; KEGG: rrs:RoseRS_3259 protein of unknown function DUF169
YP_001634058.1	KEGG: rca:Rcas_1544 magnesium chelatase ATPase subunit I; TIGRFAM: magnesium chelatase ATPase subunit I; SMART: AAA ATPase
YP_001634059.1	KEGG: rca:Rcas_2540 magnesium chelatase ATPase subunit D; TIGRFAM: magnesium chelatase ATPase subunit D; PFAM: von Willebrand factor type A; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001634060.1	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_3807 AAA ATPase, central domain protein
YP_001634061.1	PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: rca:Rcas_1073 FAD dependent oxidoreductase
YP_001634062.1	KEGG: rrs:RoseRS_1296 hypothetical protein
YP_001634063.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_0668 ABC transporter related
YP_001634064.1	PFAM: NMT1/THI5 like domain protein; KEGG: rca:Rcas_0667 NMT1/THI5 like domain protein
YP_001634065.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_0669 binding-protein-dependent transport systems inner membrane component
YP_001634066.1	PFAM: protein of unknown function DUF77; KEGG: rrs:RoseRS_0668 protein of unknown function DUF77
YP_001634067.1	PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1837 methyltransferase type 12
YP_001634068.1	PFAM: membrane protein of unknown function; KEGG: rrs:RoseRS_3547 membrane protein of unknown function
YP_001634069.1	TIGRFAM: conserved repeat domain protein; KEGG: rca:Rcas_1728 conserved repeat domain
YP_001634070.1	TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: rca:Rcas_1727 sortase family protein
YP_001634071.1	PFAM: aminotransferase class I and II; KEGG: rrs:RoseRS_1560 aminotransferase, class I and II
YP_001634072.1	PFAM: luciferase family protein; KEGG: rrs:RoseRS_1121 luciferase family protein
YP_001634073.1	KEGG: rrs:RoseRS_0591 hypothetical protein
YP_001634074.1	KEGG: rrs:RoseRS_1491 hypothetical protein
YP_001634075.1	TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rca:Rcas_0087 FolC bifunctional protein
YP_001634076.1	PFAM: protein of unknown function DUF990; KEGG: ttj:TTHA1204 hypothetical protein
YP_001634077.1	TIGRFAM: small GTP-binding protein; GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: rca:Rcas_3144 small GTP-binding protein
YP_001634078.1	KEGG: rrs:RoseRS_0898 hypothetical protein
YP_001634079.1	PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: rrs:RoseRS_0009 deoxyribodipyrimidine photolyase-related protein
YP_001634080.1	KEGG: rca:Rcas_2646 hypothetical protein
YP_001634081.1	KEGG: mxa:MXAN_0913 hypothetical protein
YP_001634082.1	KEGG: rca:Rcas_2105 hypothetical protein
YP_001634083.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001634084.1	PFAM: NUDIX hydrolase; KEGG: xft:PD0527 7,8-dihydro-8-oxoguanine-triphosphatase
YP_001634085.1	PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_3464 NUDIX hydrolase
YP_001634086.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
YP_001634087.1	PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc; KEGG: rrs:RoseRS_1733 PilT protein domain protein
YP_001634088.1	hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine
YP_001634089.1	PFAM: MgtC/SapB transporter; KEGG: rrs:RoseRS_4564 MgtC/SapB transporter
YP_001634090.1	KEGG: rrs:RoseRS_4561 hypothetical protein
YP_001634091.1	PFAM: Mg2 transporter protein CorA family protein; KEGG: rrs:RoseRS_4560 Mg2+ transporter protein, CorA family protein
YP_001634092.1	KEGG: rrs:RoseRS_4559 hypothetical protein
YP_001634093.1	PFAM: Mg2 transporter protein CorA family protein; KEGG: rrs:RoseRS_4558 Mg2+ and Co2+ transporter-like protein
YP_001634094.1	PFAM: Mg2 transporter protein CorA family protein; KEGG: rrs:RoseRS_4557 Mg2+ transporter protein, CorA family protein
YP_001634095.1	KEGG: rca:Rcas_0108 hypothetical protein
YP_001634096.1	PFAM: ATP-binding region ATPase domain protein; KEGG: rrs:RoseRS_2297 putative anti-sigma regulatory factor, serine/threonine protein kinase
YP_001634097.1	PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_2296 stage II sporulation E family protein
YP_001634098.1	KEGG: rca:Rcas_3170 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001634099.1	PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: rrs:RoseRS_2428 peptidase C26
YP_001634100.1	PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: rca:Rcas_3050 peptidase C26
YP_001634101.1	KEGG: pth:PTH_0922 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase
YP_001634102.1	PFAM: VanW family protein; KEGG: rca:Rcas_2379 VanW family protein
YP_001634103.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; KEGG: rca:Rcas_3883 multi-sensor hybrid histidine kinase
YP_001634104.1	KEGG: rca:Rcas_2148 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001634105.1	PFAM: Disulphide bond formation protein DsbB; KEGG: rca:Rcas_2051 disulphide bond formation protein DsbB
YP_001634106.1	TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: rrs:RoseRS_4064 glucosamine--fructose-6-phosphate aminotransferase, isomerizing
YP_001634107.1	KEGG: rrs:RoseRS_0867 hypothetical protein
YP_001634108.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif
YP_001634109.1	KEGG: amt:Amet_1480 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase
YP_001634110.1	TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: rca:Rcas_1521 putative regulatory protein, FmdB family
YP_001634111.1	TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: rrs:RoseRS_3410 carbohydrate kinase, YjeF related protein
YP_001634112.1	TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: rrs:RoseRS_1045 holo-acyl-carrier-protein synthase
YP_001634113.1	KEGG: rca:Rcas_3480 hypothetical protein
YP_001634114.1	KEGG: rrs:RoseRS_0427 SOS-response transcriptional repressor, LexA; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; peptidase S24 and S26 domain protein
YP_001634115.1	KEGG: rrs:RoseRS_2418 hypothetical protein
YP_001634116.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_3059 ABC transporter related
YP_001634117.1	KEGG: rca:Rcas_0864 hypothetical protein
YP_001634118.1	TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: rrs:RoseRS_4051 biotin--acetyl-CoA-carboxylase ligase
YP_001634119.1	TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: rrs:RoseRS_0131 cell envelope-related transcriptional attenuator
YP_001634120.1	TIGRFAM: integral membrane protein MviN; PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: rrs:RoseRS_0132 integral membrane protein MviN
YP_001634121.1	PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: rca:Rcas_3042 inosine/uridine-preferring nucleoside hydrolase
YP_001634122.1	KEGG: rca:Rcas_3041 exonuclease-like protein
YP_001634123.1	PFAM: protein of unknown function RIO1; protein kinase; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; KEGG: rrs:RoseRS_2631 protein kinase
YP_001634124.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_3044 ABC transporter related
YP_001634125.1	TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: rca:Rcas_1550 branched-chain amino acid aminotransferase
YP_001634126.1	PFAM: beta-lactamase domain protein; KEGG: rca:Rcas_3811 beta-lactamase domain protein
YP_001634127.1	TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: rca:Rcas_4061 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
YP_001634128.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
YP_001634129.1	TIGRFAM: ribosomal protein S21; KEGG: rca:Rcas_2428 ribosomal protein S21
YP_001634130.1	PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: gka:GK0703 alpha-cyclodextrinase
YP_001634131.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gka:GK0706 maltose/maltodextrin transport system (permease)
YP_001634132.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ade:Adeh_4135 ABC sugar transporter, inner membrane subunit
YP_001634133.1	PFAM: extracellular solute-binding protein family 1; KEGG: tpe:Tpen_1055 extracellular solute-binding protein, family 1
YP_001634134.1	PFAM: regulatory protein MarR; KEGG: bbt:BBta_7499 putative transcriptional regulatory protein, MarR family
YP_001634135.1	KEGG: rca:Rcas_0390 transcriptional regulator, CdaR
YP_001634136.1	TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: rrs:RoseRS_0249 cell envelope-related transcriptional attenuator
YP_001634137.1	similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate
YP_001634138.1	KEGG: rca:Rcas_1852 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase
YP_001634139.1	KEGG: rrs:RoseRS_2561 glucose-6-P dehydrogenase subunit-like protein
YP_001634141.1	KEGG: rrs:RoseRS_2867 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase
YP_001634142.1	PFAM: UbiA prenyltransferase; KEGG: rrs:RoseRS_2248 UbiA prenyltransferase
YP_001634143.1	PFAM: aspartate/glutamate/uridylate kinase; KEGG: rca:Rcas_4059 aspartate/glutamate/uridylate kinase
YP_001634144.1	PFAM: protein of unknown function DUF95 transmembrane; KEGG: rrs:RoseRS_3801 protein of unknown function DUF95, transmembrane
YP_001634145.1	KEGG: rrs:RoseRS_1278 hypothetical protein
YP_001634146.1	PFAM: protein of unknown function DUF192; KEGG: rca:Rcas_1679 protein of unknown function DUF192
YP_001634147.1	PFAM: type II secretion system protein; KEGG: rca:Rcas_1680 type II secretion system protein
YP_001634148.1	PFAM: type II secretion system protein; KEGG: rrs:RoseRS_1275 type II secretion system protein
YP_001634149.1	PFAM: type II secretion system protein E; KEGG: rrs:RoseRS_1274 type II secretion system protein E
YP_001634150.1	PFAM: SAF domain protein; KEGG: rrs:RoseRS_1272 SAF domain
YP_001634151.1	PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_2485 alpha/beta hydrolase fold
YP_001634152.1	KEGG: art:Arth_3416 hypothetical protein
YP_001634153.1	PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rca:Rcas_4246 alpha amylase catalytic region
YP_001634154.1	KEGG: gvi:gll2767 hypothetical protein
YP_001634155.1	KEGG: ade:Adeh_2155 hypothetical protein
YP_001634156.1	KEGG: mxa:MXAN_5770 hypothetical protein
YP_001634157.1	involved in a recombinational process of DNA repair, independent of the recBC complex
YP_001634158.1	PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_1534 conserved hypothetical protein 103
YP_001634159.1	KEGG: rrs:RoseRS_1535 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase
YP_001634161.1	PFAM: ATPase associated with various cellular activities AAA_5; KEGG: rca:Rcas_4197 ATPase associated with various cellular activities AAA_5
YP_001634162.1	KEGG: rrs:RoseRS_1547 glycosyl hydrolase, BNR repeat-containing protein
YP_001634163.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: eba:ebA2987 putative two component sensor
YP_001634164.1	KEGG: rca:Rcas_3604 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region
YP_001634165.1	TIGRFAM: preprotein translocase, SecA subunit; PFAM: SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: rca:Rcas_0657 preprotein translocase, SecA subunit
YP_001634166.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1317 ABC transporter related
YP_001634167.1	PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_1319 inner-membrane translocator
YP_001634168.1	PFAM: thioesterase superfamily protein; KEGG: xac:XAC4070 hypothetical protein
YP_001634169.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: rrs:RoseRS_4322 flavin reductase domain protein, FMN-binding
YP_001634170.1	KEGG: rrs:RoseRS_1115 hypothetical protein
YP_001634171.1	PFAM: conserved hypothetical protein; KEGG: rca:Rcas_0178 hypothetical protein
YP_001634172.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_0088 amine oxidase
YP_001634173.1	KEGG: rrs:RoseRS_1123 LamG domain protein jellyroll fold domain protein
YP_001634174.1	PFAM: protein of unknown function UPF0027; KEGG: bfr:BF2711 hypothetical protein
YP_001634175.1	PFAM: Helix-turn-helix type 11 domain protein; KEGG: pca:Pcar_1036 hypothetical protein
YP_001634176.1	KEGG: tva:TVAG_406480 hypothetical protein Pfam: Peptidase_C24 Cytadhesin_P30 PT PROSITE: PRO_RICH THR_RICH
YP_001634177.1	PFAM: Na+/solute symporter; KEGG: rca:Rcas_2264 Na+/solute symporter
YP_001634178.1	KEGG: rrs:RoseRS_1629 membrane protein-like protein
YP_001634180.1	PFAM: deoxyhypusine synthase; KEGG: cyb:CYB_2420 deoxyhypusine synthase family protein
YP_001634181.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: nca:Noca_1641 cyclic nucleotide-binding
YP_001634183.1	KEGG: cbu:CBU_1950 hypothetical protein
YP_001634184.1	KEGG: nca:Noca_2086 hypothetical protein
YP_001634185.1	the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli
YP_001634186.1	TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: rrs:RoseRS_0992 phosphate uptake regulator, PhoU
YP_001634187.1	PFAM: nuclease (SNase domain protein); KEGG: rrs:RoseRS_0374 nuclease (SNase domain protein)
YP_001634188.1	PFAM: transposase IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4
YP_001634189.1	TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: rca:Rcas_1985 CRISPR-associated protein Cas2
YP_001634190.1	TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: rca:Rcas_1984 CRISPR-associated protein Cas1
YP_001634191.1	TIGRFAM: CRISPR-associated protein Cas6; KEGG: rca:Rcas_1983 hypothetical protein
YP_001634192.1	KEGG: rca:Rcas_1982 hypothetical protein
YP_001634193.1	KEGG: rca:Rcas_1982 hypothetical protein
YP_001634194.1	TIGRFAM: CRISPR-associated RAMP protein, Csm5 family; KEGG: rca:Rcas_1981 CRISPR-associated RAMP protein, Csm5 family
YP_001634195.1	TIGRFAM: CRISPR-associated RAMP protein, Csm4 family; KEGG: rca:Rcas_1980 CRISPR-associated RAMP protein, Csm4 family
YP_001634196.1	TIGRFAM: CRISPR-associated RAMP protein, Csm3 family; PFAM: protein of unknown function DUF324; KEGG: rca:Rcas_1979 CRISPR-associated RAMP protein, Csm3 family
YP_001634197.1	TIGRFAM: CRISPR-associated protein, Csm2 family; PFAM: protein of unknown function DUF310; KEGG: rca:Rcas_1978 CRISPR-associated protein, Csm2 family
YP_001634198.1	TIGRFAM: CRISPR-associated protein, Csm1 family; KEGG: rca:Rcas_1977 CRISPR-associated protein, Csm1 family
YP_001634199.1	PFAM: FAD dependent oxidoreductase; KEGG: rca:Rcas_1338 FAD dependent oxidoreductase
YP_001634200.1	KEGG: rca:Rcas_2981 hypothetical protein
YP_001634201.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; KEGG: rca:Rcas_2982 electron transport protein SCO1/SenC
YP_001634202.1	PFAM: protein of unknown function DUF461; KEGG: rrs:RoseRS_3482 protein of unknown function DUF461
YP_001634204.1	KEGG: mla:Mlab_0294 hypothetical protein
YP_001634205.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK0925 hypothetical protein
YP_001634206.1	PFAM: SirA family protein; KEGG: ace:Acel_0524 SirA family protein
YP_001634207.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ace:Acel_0523 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001634208.1	catalyzes the formation of phenol and pyruvate from tyrosine
YP_001634209.1	PFAM: ROK family protein; KEGG: sde:Sde_2639 protein of unknown function UPF0031
YP_001634210.1	TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rrs:RoseRS_0406 diaminopimelate decarboxylase
YP_001634211.1	TIGRFAM: metal dependent phophohydrolase; KEGG: rrs:RoseRS_3456 metal dependent phophohydrolase
YP_001634212.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rrs:RoseRS_3774 heavy metal translocating P-type ATPase
YP_001634213.1	PFAM: Heavy metal transport/detoxification protein; KEGG: rca:Rcas_0294 copper ion binding protein
YP_001634214.1	PFAM: protein of unknown function DUF156; KEGG: bha:BH0558 hypothetical protein
YP_001634215.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pde:Pden_4360 ABC transporter related
YP_001634216.1	PFAM: Aldehyde Dehydrogenase_; KEGG: rrs:RoseRS_3204 aldehyde dehydrogenase
YP_001634217.1	PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: reu:Reut_A2011 hypothetical protein
YP_001634218.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rru:Rru_A2103 L-carnitine dehydratase/bile acid-inducible protein F
YP_001634219.1	KEGG: rca:Rcas_0437 hypothetical protein
YP_001634220.1	KEGG: rrs:RoseRS_3899 hypothetical protein
YP_001634221.1	KEGG: afw:Anae109_4237 hypothetical protein
YP_001634222.1	KEGG: rca:Rcas_2691 hypothetical protein
YP_001634223.1	PFAM: class II aldolase/adducin family protein; KEGG: aba:Acid345_4482 class II aldolase/adducin-like
YP_001634224.1	KEGG: rrs:RoseRS_2420 hypothetical protein
YP_001634225.1	PFAM: Amidase; KEGG: rxy:Rxyl_0238 amidase
YP_001634226.1	PFAM: Saccharopine dehydrogenase; KEGG: pfl:PFL_3454 hypothetical protein
YP_001634227.1	PFAM: transcriptional regulator domain protein; KEGG: pap:PSPA7_3717 KDP operon transcriptional regulatory protein KdpE
YP_001634228.1	PFAM: transcriptional regulator domain protein; KEGG: rca:Rcas_2795 two component transcriptional regulator, winged helix family
YP_001634229.1	KEGG: rrs:RoseRS_0662 hypothetical protein
YP_001634230.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rca:Rcas_2232 pyridoxamine 5'-phosphate oxidase-related FMN-binding
YP_001634231.1	KEGG: har:HEAR3390 hypothetical protein
YP_001634232.1	PFAM: Rhodanese domain protein; protein of unknown function DUF1486; KEGG: rha:RHA1_ro04017 possible cyclase
YP_001634235.1	PFAM: TPR repeat-containing protein; SMART: helix-turn-helix domain protein; Tetratricopeptide domain protein; KEGG: rxy:Rxyl_2946 transcriptional regulator, LuxR family
YP_001634236.1	PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rca:Rcas_2586 TrkA-C domain protein
YP_001634237.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bov:BOV_1266 hypothetical protein
YP_001634239.1	TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: rca:Rcas_0361 DNA repair protein RecN
YP_001634240.1	KEGG: rrs:RoseRS_0120 TPR repeat-containing protein
YP_001634241.1	PFAM: glycosyl transferase family 4; KEGG: rrs:RoseRS_4524 glycosyl transferase, family 4
YP_001634242.1	PFAM: AMP-dependent synthetase and ligase; Enoyl-CoA hydratase/isomerase; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_3202 AMP-dependent synthetase and ligase
YP_001634243.1	KEGG: bcz:BCZK1987 conserved hypothetical protein; TPR-repeat domains
YP_001634244.1	KEGG: rca:Rcas_3907 hypothetical protein
YP_001634245.1	KEGG: rca:Rcas_0207 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase
YP_001634246.1	PFAM: GHMP kinase domain protein; KEGG: rrs:RoseRS_4285 GHMP kinase, C terminal domain protein
YP_001634247.1	KEGG: cch:Cag_1136 hypothetical protein
YP_001634248.1	PFAM: MOFRL domain protein; KEGG: rca:Rcas_3272 hydroxypyruvate reductase
YP_001634249.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
YP_001634250.1	KEGG: rrs:RoseRS_4139 hypothetical protein
YP_001634251.1	KEGG: rca:Rcas_1463 Fe-S-cluster-containing hydrogenase components 1-like protein
YP_001634252.1	PFAM: Polysulphide reductase NrfD; KEGG: rca:Rcas_1464 polysulphide reductase NrfD
YP_001634253.1	KEGG: sus:Acid_0492 conserved hypothetical protein, transmembrane prediction
YP_001634254.1	KEGG: aba:Acid345_3000 hypothetical protein
YP_001634255.1	KEGG: sus:Acid_0494 hypothetical protein
YP_001634257.1	PFAM: protein of unknown function DUF123; KEGG: rrs:RoseRS_1232 protein of unknown function DUF123
YP_001634258.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
YP_001634259.1	TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: rca:Rcas_3176 phosphoribosylglycinamide formyltransferase
YP_001634260.1	PFAM: ABC-1 domain protein; KEGG: rrs:RoseRS_0578 ABC-1 domain protein
YP_001634261.1	PFAM: diacylglycerol kinase; KEGG: rrs:RoseRS_3595 diacylglycerol kinase
YP_001634262.1	PFAM: Phosphoglycerate mutase; KEGG: rca:Rcas_2324 phosphoglycerate mutase
YP_001634263.1	KEGG: rrs:RoseRS_1841 hypothetical protein
YP_001634264.1	KEGG: rca:Rcas_0821 hypothetical protein
YP_001634265.1	PFAM: iron permease FTR1; KEGG: rca:Rcas_0820 iron permease FTR1
YP_001634266.1	PFAM: nitroreductase; KEGG: dge:Dgeo_1628 nitroreductase
YP_001634267.1	KEGG: rrs:RoseRS_1840 hypothetical protein
YP_001634268.1	KEGG: rca:Rcas_2504 hypothetical protein
YP_001634269.1	KEGG: rrs:RoseRS_1840 hypothetical protein
YP_001634270.1	KEGG: rca:Rcas_2504 hypothetical protein
YP_001634271.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_2472 glycosyl transferase group 1
YP_001634272.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rca:Rcas_4065 methyltransferase type 11
YP_001634273.1	KEGG: bxe:Bxe_A0855 oxygen-independent coproporphyrinogen III oxidase HemN; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_001634274.1	TIGRFAM: protoporphyrinogen oxidase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mgm:Mmc1_0027 protoporphyrinogen oxidase
YP_001634276.1	PFAM: NHL repeat containing protein; KEGG: rrs:RoseRS_2986 PA14 domain protein
YP_001634277.1	PFAM: PA14 domain protein; KEGG: fal:FRAAL1593 putative galactose oxidase
YP_001634278.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Fibronectin type III domain protein; Kelch repeat protein; KEGG: rca:Rcas_2773 peptidase S8 and S53 subtilisin kexin sedolisin
YP_001634279.1	PFAM: peptidase M23B; Fibronectin type III domain protein; KEGG: rrs:RoseRS_1520 FHA domain containing protein
YP_001634280.1	PFAM: glycosyl transferase group 1; Glycosyltransferase 28 domain; Monogalactosyldiacylglycerol synthase; KEGG: rrs:RoseRS_2020 monogalactosyldiacylglycerol synthase
YP_001634281.1	PFAM: Glycosyltransferase 28 domain; Monogalactosyldiacylglycerol synthase; KEGG: gvi:glr3229 hypothetical protein
YP_001634282.1	KEGG: lpc:LPC_0165 hypothetical protein
YP_001634284.1	PFAM: putative esterase; KEGG: rrs:RoseRS_0667 putative esterase
YP_001634285.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_1983 multi-sensor signal transduction histidine kinase
YP_001634286.1	KEGG: gfo:GFO_1731 hypothetical protein
YP_001634287.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rca:Rcas_3693 DNA methylase N-4/N-6 domain protein
YP_001634288.1	KEGG: rca:Rcas_3694 hypothetical protein
YP_001634289.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rrs:RoseRS_3421 two component transcriptional regulator, LuxR family
YP_001634290.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_3420 integral membrane sensor signal transduction histidine kinase
YP_001634291.1	KEGG: rrs:RoseRS_2309 hypothetical protein
YP_001634292.1	PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: rrs:RoseRS_0293 peptidase M1, membrane alanine aminopeptidase
YP_001634293.1	PFAM: histone family protein DNA-binding protein; KEGG: rca:Rcas_0673 histone family protein DNA-binding protein
YP_001634294.1	TIGRFAM: small GTP-binding protein; PFAM: protein of unknown function ATP binding; Miro domain protein; KEGG: rrs:RoseRS_2141 small GTP-binding protein
YP_001634295.1	KEGG: rrs:RoseRS_2140 hypothetical protein
YP_001634296.1	PFAM: protein of unknown function DUF1385; KEGG: rca:Rcas_1732 protein of unknown function DUF1385
YP_001634297.1	KEGG: rca:Rcas_1733 hypothetical protein
YP_001634298.1	KEGG: rrs:RoseRS_2137 hypothetical protein
YP_001634299.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
YP_001634300.1	PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: rca:Rcas_0892 alpha/beta hydrolase fold
YP_001634301.1	PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_0226 alpha/beta hydrolase fold
YP_001634302.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_0228 AMP-dependent synthetase and ligase
YP_001634303.1	PFAM: band 7 protein; KEGG: rrs:RoseRS_0385 hypothetical protein
YP_001634304.1	PFAM: band 7 protein; KEGG: rrs:RoseRS_0384 band 7 protein
YP_001634305.1	PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: pth:PTH_0725 hypothetical protein
YP_001634306.1	PFAM: PemK family protein; KEGG: ana:asr3006 hypothetical protein
YP_001634307.1	PFAM: FAD linked oxidase domain protein; KEGG: sth:STH993 glycolate oxidase subunit
YP_001634308.1	PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: ccr:CC_1187 spoU rRNA methylase family protein
YP_001634309.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: csa:Csal_2500 lysine exporter protein (LysE/YggA)
YP_001634310.1	KEGG: rca:Rcas_0430 hypothetical protein
YP_001634311.1	PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rca:Rcas_2893 PucC protein
YP_001634312.1	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis
YP_001634313.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: rca:Rcas_1782 transcriptional regulator, AsnC family
YP_001634314.1	PFAM: Acetamidase/Formamidase; KEGG: rrs:RoseRS_3551 acetamidase/formamidase
YP_001634315.1	hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide
YP_001634316.1	TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: sus:Acid_0181 uroporphyrin-III C-methyltransferase
YP_001634317.1	TIGRFAM: siroheme synthase; KEGG: tth:TTC0311 precorrin-2 oxidase / ferrochelatase
YP_001634318.1	PFAM: protein of unknown function DUF81; KEGG: ttj:TTHA0668 hypothetical protein
YP_001634319.1	ATP sulfurylase; ATPS; converts ATP and sulfate to 5'phosphosulfate and pyrophosphate; in some organisms this enzyme is involved in the incorporation of inorganic sulfate while in others it is involved in the production of ATP in the reverse direction; the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms
YP_001634320.1	PFAM: phosphoadenosine phosphosulfate reductase; KEGG: dge:Dgeo_1409 phosphoadenosine phosphosulfate reductase
YP_001634321.1	converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis
YP_001634323.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0774 TPR repeat-containing protein
YP_001634324.1	PFAM: Roadblock/LC7 family protein; KEGG: rca:Rcas_0033 roadblock/LC7 family protein
YP_001634325.1	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate
YP_001634326.1	TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: afw:Anae109_0367 phospho-2-dehydro-3-deoxyheptonate aldolase
YP_001634327.1	PFAM: cell cycle protein; KEGG: rca:Rcas_3131 cell cycle protein
YP_001634328.1	PFAM: PfkB domain protein; KEGG: sat:SYN_02874 ribokinase
YP_001634329.1	KEGG: art:Arth_1248 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase
YP_001634330.1	TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: rca:Rcas_3739 succinyl-CoA synthetase, alpha subunit
YP_001634331.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_2414 GAF sensor signal transduction histidine kinase
YP_001634332.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: rrs:RoseRS_3214 Rieske (2Fe-2S) domain protein
YP_001634333.1	PFAM: Fibronectin type III domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rrs:RoseRS_2452 alpha amylase, catalytic region
YP_001634334.1	PFAM: PspC domain protein; KEGG: rca:Rcas_3205 phage shock protein C, PspC
YP_001634335.1	PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_0730 metallophosphoesterase
YP_001634336.1	KEGG: rrs:RoseRS_2959 hypothetical protein
YP_001634337.1	PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2958 glycosyl transferase, group 1
YP_001634338.1	KEGG: rca:Rcas_1943 membrane protein-like protein
YP_001634339.1	KEGG: rrs:RoseRS_2657 hypothetical protein
YP_001634340.1	PFAM: Tetratricopeptide TPR_4; KEGG: rrs:RoseRS_2658 glycosyl transferase, family 39
YP_001634341.1	PFAM: Tetratricopeptide TPR_4; KEGG: rca:Rcas_2727 glycosyl transferase family 39
YP_001634342.1	PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: sru:SRU_2330 deoxyribodipyrimidine photolyase, putative
YP_001634344.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: gur:Gura_0383 peptidase S8 and S53, subtilisin, kexin, sedolisin
YP_001634345.1	PFAM: helix-turn-helix domain protein; KEGG: gvi:glr1376 hypothetical protein
YP_001634346.1	KEGG: rca:Rcas_0403 hypothetical protein
YP_001634347.1	KEGG: rca:Rcas_3348 PKD domain containing protein
YP_001634348.1	PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: drm:Dred_0878 D12 class N6 adenine-specific DNA methyltransferase
YP_001634349.1	KEGG: cte:CT1915 hypothetical protein
YP_001634350.1	KEGG: csc:Csac_2594 hypothetical protein
YP_001634351.1	PFAM: UvrD/REP helicase; KEGG: har:HEAR2199 putative DNA helicase II , UvrD Rep family
YP_001634352.1	KEGG: net:Neut_2605 UvrD/REP helicase
YP_001634353.1	PFAM: thioesterase superfamily protein; KEGG: sth:STH878 hypothetical protein
YP_001634354.1	PFAM: response regulator receiver; KEGG: rrs:RoseRS_3355 two component transcriptional regulator, fis family
YP_001634355.1	PFAM: histidine triad (HIT) protein; KEGG: iho:Igni_1404 histidine triad (HIT) protein
YP_001634356.1	TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: rca:Rcas_4162 peptide chain release factor 2
YP_001634357.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rrs:RoseRS_2153 ErfK/YbiS/YcfS/YnhG family protein
YP_001634358.1	PFAM: peptidase M23B; KEGG: rrs:RoseRS_0052 peptidase M23B
YP_001634359.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rrs:RoseRS_2401 protein tyrosine phosphatase
YP_001634360.1	TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: rrs:RoseRS_2449 chromate transporter, chromate ion transporter (CHR) family
YP_001634361.1	PFAM: HhH-GPD family protein; KEGG: rca:Rcas_3332 HhH-GPD family protein
YP_001634362.1	KEGG: rrs:RoseRS_4181 alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35
YP_001634364.1	PFAM: selenium-binding protein; KEGG: rxy:Rxyl_0336 selenium-binding protein
YP_001634365.1	KEGG: rxy:Rxyl_0337 hypothetical protein
YP_001634367.1	PFAM: Methyltransferase type 11; KEGG: rrs:RoseRS_2472 methyltransferase type 11
YP_001634368.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rca:Rcas_2342 GCN5-related N-acetyltransferase
YP_001634369.1	PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2470 glycosyl transferase, group 1
YP_001634370.1	PFAM: prolipoprotein diacylglyceryl transferase; KEGG: rca:Rcas_0627 prolipoprotein diacylglyceryl transferase
YP_001634371.1	TIGRFAM: phosphoribosylformylglycinamidine synthase I; KEGG: rca:Rcas_3277 phosphoribosylformylglycinamidine synthase I
YP_001634372.1	PFAM: Forkhead-associated protein; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_1844 protein kinase
YP_001634373.1	PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: rrs:RoseRS_3956 SH3, type 3 domain protein
YP_001634374.1	KEGG: rrs:RoseRS_3331 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia
YP_001634375.1	TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: rrs:RoseRS_3794 cell division protein FtsZ
YP_001634376.1	PFAM: cell division protein FtsA; KEGG: rrs:RoseRS_3793 cell division protein FtsA
YP_001634377.1	PFAM: Polypeptide-transport-associated domain protein FtsQ-type; KEGG: rca:Rcas_1089 polypeptide-transport-associated domain protein FtsQ-type
YP_001634378.1	TIGRFAM: D-alanine--D-alanine ligase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; D-alanine--D-alanine ligase domain protein; RimK domain protein ATP-grasp; KEGG: rrs:RoseRS_3791 D-alanine--D-alanine ligase
YP_001634379.1	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis
YP_001634380.1	TIGRFAM: UDP-N-acetylmuramate--alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rrs:RoseRS_3788 UDP-N-acetylmuramate--alanine ligase
YP_001634381.1	KEGG: rca:Rcas_1094 hypothetical protein
YP_001634382.1	KEGG: rrs:RoseRS_3786 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain
YP_001634383.1	TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: rca:Rcas_1096 cell division protein FtsW
YP_001634384.1	PFAM: Rhomboid family protein; KEGG: rca:Rcas_1097 rhomboid family protein
YP_001634385.1	TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rca:Rcas_1098 UDP-N-acetylmuramoylalanine--D-glutamate ligase
YP_001634386.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
YP_001634387.1	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rca:Rcas_1100 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase
YP_001634388.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: rrs:RoseRS_3780 peptidoglycan glycosyltransferase
YP_001634389.1	KEGG: rca:Rcas_1102 hypothetical protein
YP_001634390.1	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: rrs:RoseRS_3778 S-adenosyl-methyltransferase MraW
YP_001634391.1	TIGRFAM: MraZ protein; PFAM: protein of unknown function UPF0040; KEGG: rca:Rcas_1104 MraZ protein
YP_001634392.1	TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: mta:Moth_2134 molybdenum cofactor biosynthesis protein C
YP_001634394.1	KEGG: rca:Rcas_1638 hypothetical protein
YP_001634395.1	KEGG: rrs:RoseRS_1314 hypothetical protein
YP_001634396.1	KEGG: rrs:RoseRS_0501 xanthine and CO dehydrogenase maturation factor XdhC/CoxF family-like protein
YP_001634397.1	PFAM: protein of unknown function DUF182; KEGG: rrs:RoseRS_0502 protein of unknown function DUF182
YP_001634398.1	TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: amt:Amet_4705 TRAP transporter, 4TM/12TM fusion protein
YP_001634399.1	TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: afu:AF0635 immunogenic protein
YP_001634400.1	PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_3822 alpha/beta hydrolase fold
YP_001634401.1	KEGG: rca:Rcas_3705 TPR repeat-containing protein
YP_001634402.1	PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A; KEGG: rrs:RoseRS_2165 VWA containing CoxE family protein
YP_001634403.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bbr:BB1585 hypothetical protein
YP_001634404.1	KEGG: rrs:RoseRS_3491 response regulator receiver and SARP domain protein
YP_001634405.1	KEGG: rrs:RoseRS_1623 helicase
YP_001634406.1	PFAM: alpha/beta hydrolase fold; KEGG: cte:CT1312 lipase, putative
YP_001634407.1	KEGG: rrs:RoseRS_2523 DNA-(apurinic or apyrimidinic site) lyase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop
YP_001634408.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rrs:RoseRS_0605 hypothetical protein
YP_001634409.1	KEGG: rrs:RoseRS_1482 hypothetical protein
YP_001634410.1	KEGG: rrs:RoseRS_2584 hypothetical protein
YP_001634412.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_2583 tetratricopeptide TPR_2 repeat protein
YP_001634413.1	PFAM: extracellular solute-binding protein family 5; KEGG: rca:Rcas_0383 extracellular solute-binding protein family 5
YP_001634414.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4598 binding-protein-dependent transport systems inner membrane component
YP_001634415.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rca:Rcas_0385 binding-protein-dependent transport systems inner membrane component
YP_001634417.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: rca:Rcas_4280 phospholipase D/transphosphatidylase
YP_001634418.1	PFAM: extracellular solute-binding protein family 5; KEGG: rrs:RoseRS_2770 extracellular solute-binding protein, family 5
YP_001634419.1	PFAM: cobalt transport protein; KEGG: rrs:RoseRS_1922 cobalt transport protein
YP_001634420.1	KEGG: rca:Rcas_4124 ABC transporter related; TIGRFAM: thiW protein; PFAM: ABC transporter related; ThiW family protein; SMART: AAA ATPase
YP_001634421.1	TIGRFAM: hydroxymethylpyrimidine transporter CytX; PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: rrs:RoseRS_2771 putative hydroxymethylpyrimidine transporter CytX
YP_001634422.1	KEGG: rrs:RoseRS_1207 hypothetical protein
YP_001634423.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2817 transcriptional regulator, LysR family
YP_001634424.1	PFAM: TENA/THI-4 domain protein; KEGG: rrs:RoseRS_1028 transcriptional activator, TenA family
YP_001634425.1	KEGG: rca:Rcas_2169 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001634426.1	PFAM: regulatory protein GntR HTH; regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: mta:Moth_0011 transcriptional regulator, DeoR family
YP_001634427.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ape:APE_0385.1 acyl-CoA dehydrogenase, short-chain specific
YP_001634428.1	TIGRFAM: phosphocarrier, HPr family; phosphoenolpyruvate-protein phosphotransferase; PFAM: phosphocarrier HPr protein; PEP-utilizing protein; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: dge:Dgeo_2173 phosphoenolpyruvate-protein phosphotransferase
YP_001634429.1	KEGG: dge:Dgeo_2174 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein
YP_001634430.1	TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS fructose-specific IIB subunit; KEGG: dge:Dgeo_2175 phosphotransferase system, fructose IIC component
YP_001634431.1	KEGG: rca:Rcas_2639 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001634432.1	PFAM: transcriptional regulator TrmB; KEGG: sus:Acid_1756 transcriptional regulator, TrmB
YP_001634433.1	KEGG: sus:Acid_4167 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_001634435.1	KEGG: rrs:RoseRS_4573 hypothetical protein
YP_001634437.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rca:Rcas_1216 glycerophosphodiester phosphodiesterase
YP_001634438.1	KEGG: rca:Rcas_1217 zinc finger SWIM domain protein
YP_001634439.1	KEGG: rrs:RoseRS_1705 hypothetical protein
YP_001634440.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; KEGG: cvi:CV_0608 hypothetical protein
YP_001634441.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_2763 binding-protein-dependent transport systems inner membrane component
YP_001634442.1	PFAM: NMT1/THI5 like domain protein; KEGG: rca:Rcas_2388 NMT1/THI5 like domain protein
YP_001634443.1	KEGG: son:SO_1458 hypothetical protein
YP_001634444.1	KEGG: son:SO_1459 hypothetical protein
YP_001634445.1	PFAM: regulatory protein TetR; KEGG: rca:Rcas_1767 transcriptional regulator, TetR family
YP_001634446.1	PFAM: secretion protein HlyD family protein; KEGG: rrs:RoseRS_3638 secretion protein HlyD family protein
YP_001634447.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3212 cyclic nucleotide-binding protein
YP_001634448.1	PFAM: protein of unknown function DUF214; KEGG: rrs:RoseRS_1075 protein of unknown function DUF214
YP_001634449.1	TIGRFAM: helicase, RecD/TraA family; SMART: Helix-hairpin-helix DNA-binding class 1; AAA ATPase; KEGG: tfu:Tfu_1753 helicase RecD/TraA
YP_001634450.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rrs:RoseRS_0216 glyoxylate reductase
YP_001634451.1	PFAM: protein of unknown function DUF162; KEGG: rca:Rcas_1855 protein of unknown function DUF162
YP_001634452.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rci:RRC299 putative acetyltransferase (GNAT family)
YP_001634453.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rrs:RoseRS_4458 protein of unknown function DUF224, cysteine-rich region domain protein
YP_001634454.1	TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: rca:Rcas_0339 GTP-binding protein TypA
YP_001634455.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: rca:Rcas_4348 RNA polymerase, sigma 70 subunit, RpoD family
YP_001634456.1	KEGG: rrs:RoseRS_1244 hypothetical protein
YP_001634457.1	KEGG: rrs:RoseRS_1243 hypothetical protein
YP_001634458.1	KEGG: rrs:RoseRS_1245 NB-ARC domain protein
YP_001634459.1	KEGG: neu:NE1799 hypothetical protein
YP_001634460.1	PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_1073 uncharacterized domain 1
YP_001634461.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: ade:Adeh_3719 NADH-flavin oxidoreductase/NADH oxidase
YP_001634462.1	PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases; KEGG: cyb:CYB_1701 putative helicase
YP_001634463.1	KEGG: rrs:RoseRS_1882 hypothetical protein
YP_001634464.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rca:Rcas_2715 anti-sigma-factor antagonist
YP_001634465.1	PFAM: UbiA prenyltransferase; KEGG: mgr:MGG_08003 hypothetical protein
YP_001634466.1	PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: rrs:RoseRS_2715 glutamine synthetase, catalytic region
YP_001634467.1	PFAM: cytochrome c class I; KEGG: rca:Rcas_2631 cytochrome c class I
YP_001634468.1	PFAM: ferredoxin; KEGG: rca:Rcas_2983 ferredoxin
YP_001634469.1	KEGG: rca:Rcas_3195 MCP methyltransferase, CheR-type with Tpr repeats; PFAM: MCP methyltransferase CheR-type; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein
YP_001634470.1	PFAM: CheB methylesterase; response regulator receiver; KEGG: rca:Rcas_3196 response regulator receiver modulated CheB methylesterase
YP_001634471.1	PFAM: CheW domain protein; KEGG: rrs:RoseRS_0995 putative CheW protein
YP_001634473.1	PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: rca:Rcas_3200 CheA signal transduction histidine kinase
YP_001634474.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rrs:RoseRS_0999 methyl-accepting chemotaxis sensory transducer
YP_001634475.1	KEGG: rpb:RPB_2961 methyl-accepting chemotaxis sensory transducer
YP_001634476.1	PFAM: response regulator receiver; KEGG: rrs:RoseRS_0997 response regulator receiver protein
YP_001634477.1	PFAM: CheW domain protein; KEGG: rrs:RoseRS_1000 putative CheW protein
YP_001634478.1	TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: ppr:PBPRB1545 hypothetical selenophosphate synthase
YP_001634479.1	KEGG: rrs:RoseRS_3536 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001634480.1	PFAM: CBS domain containing protein; KEGG: rrs:RoseRS_0917 CBS domain containing protein
YP_001634481.1	PFAM: glutamine cyclotransferase; KEGG: mmr:Mmar10_1722 glutamine cyclotransferase
YP_001634482.1	PFAM: peptidylprolyl isomerase FKBP-type; KEGG: rso:RSc0784 probable FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase)(immunophilin) protein
YP_001634483.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: rrs:RoseRS_2859 mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein
YP_001634485.1	KEGG: rca:Rcas_1294 hypothetical protein
YP_001634486.1	PFAM: putative RNA methylase; KEGG: sth:STH1434 hypothetical protein
YP_001634487.1	TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: rrs:RoseRS_4055 carbamoyl-phosphate synthase, small subunit
YP_001634488.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_1839 glycosyl transferase group 1
YP_001634489.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rca:Rcas_1840 peptidase M20
YP_001634490.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rca:Rcas_2242 heavy metal translocating P-type ATPase
YP_001634491.1	KEGG: rca:Rcas_1875 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase
YP_001634492.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: rrs:RoseRS_0828 single-strand binding protein
YP_001634493.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: rca:Rcas_3945 transcriptional regulator, AsnC family
YP_001634494.1	KEGG: rrs:RoseRS_1331 hypothetical protein
YP_001634495.1	KEGG: rrs:RoseRS_1264 DNA-directed RNA polymerase, beta' subunit; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein
YP_001634496.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_001634497.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_3736 integral membrane sensor signal transduction histidine kinase
YP_001634498.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_3737 two component transcriptional regulator, winged helix family
YP_001634500.1	PFAM: aminoglycoside phosphotransferase; peptidase M23B; aminotransferase class-III; KEGG: rde:RD1_3675 aminotransferase, putative
YP_001634501.1	KEGG: art:Arth_3767 alpha-1,6-glucosidases, pullulanase-type; TIGRFAM: alpha-1,6-glucosidase, pullulanase-type; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain
YP_001634502.1	TIGRFAM: mevalonate kinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: rrs:RoseRS_2135 mevalonate kinase
YP_001634503.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily
YP_001634504.1	KEGG: rca:Rcas_2672 hypothetical protein
YP_001634506.1	PFAM: protein of unknown function UPF0040; KEGG: rca:Rcas_1104 MraZ protein
YP_001634507.1	KEGG: rrs:RoseRS_2583 tetratricopeptide TPR_2 repeat protein
YP_001634508.1	PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: rca:Rcas_0212 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
YP_001634509.1	PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: lre:Lreu_0593 cell division protein FtsZ
YP_001634510.1	KEGG: bra:BRADO1241 hypothetical protein
YP_001634511.1	PFAM: glycosyl transferase family 2; KEGG: pth:PTH_0470 glycosyltransferases, probably involved in cell wall biogenesis
YP_001634512.1	PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4227 glycosyl transferase, group 1
YP_001634513.1	PFAM: glycosyl transferase group 1; KEGG: cgt:cgR_0028 hypothetical protein
YP_001634514.1	KEGG: rrs:RoseRS_2986 PA14 domain protein
YP_001634515.1	KEGG: lxx:Lxx16510 nicotinate-nucleotide pyrophosphorylase (carboxylating); TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase
YP_001634516.1	PFAM: helix-turn-helix- domain containing protein AraC type; periplasmic binding protein/LacI transcriptional regulator; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0204 integral membrane sensor hybrid histidine kinase
YP_001634517.1	KEGG: rca:Rcas_0610 hypothetical protein
YP_001634518.1	PFAM: protein of unknown function DUF323; KEGG: rrs:RoseRS_2919 protein of unknown function DUF323
YP_001634519.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rrs:RoseRS_2673 pyridoxamine 5'-phosphate oxidase-related, FMN-binding
YP_001634520.1	KEGG: rrs:RoseRS_0251 dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase
YP_001634521.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rca:Rcas_0284 multi-sensor signal transduction histidine kinase
YP_001634522.1	Catalyzes the reversible oxidation of malate to oxaloacetate
YP_001634523.1	KEGG: rrs:RoseRS_0254 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase
YP_001634524.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
YP_001634525.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
YP_001634526.1	KEGG: rrs:RoseRS_2204 hypothetical protein
YP_001634527.1	KEGG: rca:Rcas_1403 hypothetical protein
YP_001634528.1	KEGG: rrs:RoseRS_2201 ATPase involved in chromosome partitioning-like protein
YP_001634529.1	PFAM: type II secretion system protein E; KEGG: rrs:RoseRS_2200 type II secretion system protein E
YP_001634530.1	PFAM: SAF domain protein; KEGG: rca:Rcas_1407 SAF domain protein
YP_001634531.1	KEGG: rca:Rcas_1408 hypothetical protein
YP_001634532.1	PFAM: TadE family protein; KEGG: rca:Rcas_1409 TadE family protein
YP_001634533.1	TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; Cna B domain protein; KEGG: rrs:RoseRS_2196 conserved repeat domain
YP_001634535.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: nmu:Nmul_A0927 phosphoesterase, PA-phosphatase related
YP_001634537.1	KEGG: cte:CT1077 hypothetical protein
YP_001634538.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rca:Rcas_0439 fumarylacetoacetate (FAA) hydrolase
YP_001634539.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rca:Rcas_3055 methyltransferase type 11
YP_001634540.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rca:Rcas_3056 methyltransferase type 11
YP_001634541.1	KEGG: rrs:RoseRS_1132 protein of unknown function DUF6, transmembrane
YP_001634542.1	KEGG: rrs:RoseRS_3206 hypothetical protein
YP_001634543.1	PFAM: CBS domain containing protein; KEGG: rca:Rcas_2009 CBS domain containing protein
YP_001634544.1	PFAM: phosphatidylserine decarboxylase-related; KEGG: rrs:RoseRS_1290 phosphatidylserine decarboxylase-like protein
YP_001634545.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: aba:Acid345_2342 bifunctional deaminase-reductase-like
YP_001634546.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_4389 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001634547.1	KEGG: rca:Rcas_0730 putative transmembrane anti-sigma factor
YP_001634548.1	KEGG: rca:Rcas_3323 putative metalloendopeptidase, glycoprotease family; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease
YP_001634549.1	PFAM: alanine racemase domain protein; KEGG: rca:Rcas_3740 alanine racemase domain protein
YP_001634550.1	KEGG: rca:Rcas_1891 hypothetical protein
YP_001634551.1	PFAM: Extracellular ligand-binding receptor; KEGG: rrs:RoseRS_2975 extracellular ligand-binding receptor
YP_001634552.1	PFAM: inner-membrane translocator; KEGG: rca:Rcas_1893 inner-membrane translocator
YP_001634553.1	PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_2977 inner-membrane translocator
YP_001634554.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2978 ABC transporter related
YP_001634555.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_1896 ABC transporter related
YP_001634556.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_0761 two component transcriptional regulator, winged helix family
YP_001634557.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; heat shock protein DnaJ domain protein; Redoxin domain protein; KEGG: rca:Rcas_4444 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_001634558.1	PFAM: heat shock protein DnaJ domain protein; KEGG: rrs:RoseRS_0759 heat shock protein DnaJ domain protein
YP_001634559.1	PFAM: cytochrome c assembly protein; KEGG: rrs:RoseRS_0758 cytochrome c assembly protein
YP_001634560.1	KEGG: rca:Rcas_4439 hypothetical protein
YP_001634561.1	KEGG: rrs:RoseRS_0756 hypothetical protein
YP_001634562.1	PFAM: cytochrome c assembly protein; KEGG: rrs:RoseRS_3568 cytochrome c assembly protein
YP_001634563.1	PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: rrs:RoseRS_0754 cytochrome c-type biogenesis protein CcmB
YP_001634564.1	KEGG: rca:Rcas_4435 heme exporter protein CcmA; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001634565.1	PFAM: lipolytic protein G-D-S-L family; KEGG: stp:Strop_1647 chitin-binding, domain 3 protein
YP_001634566.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: rrs:RoseRS_4167 polysaccharide biosynthesis protein CapD
YP_001634567.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: rca:Rcas_1361 glutamine--scyllo-inositol transaminase
YP_001634568.1	KEGG: rca:Rcas_1344 transferase hexapeptide repeat containing protein
YP_001634569.1	PFAM: sugar transferase; KEGG: rrs:RoseRS_4262 undecaprenyl-phosphate galactose phosphotransferase
YP_001634570.1	KEGG: rrs:RoseRS_2630 hypothetical protein
YP_001634571.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
YP_001634572.1	KEGG: rrs:RoseRS_1149 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase
YP_001634573.1	PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: mgm:Mmc1_1749 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein
YP_001634574.1	TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: tpe:Tpen_0856 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit
YP_001634575.1	PFAM: Aldehyde Dehydrogenase_; KEGG: mtp:Mthe_0395 betaine-aldehyde dehydrogenase
YP_001634576.1	PFAM: Fe-S metabolism associated SufE; KEGG: rrs:RoseRS_0718 Fe-S metabolism associated SufE
YP_001634579.1	KEGG: reu:Reut_A2014 hypothetical protein
YP_001634580.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rca:Rcas_2795 two component transcriptional regulator, winged helix family
YP_001634581.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_1897 GAF sensor signal transduction histidine kinase
YP_001634582.1	PFAM: response regulator receiver; KEGG: rca:Rcas_3827 response regulator receiver protein
YP_001634583.1	KEGG: rca:Rcas_0750 hypothetical protein
YP_001634584.1	PFAM: Dynamin family protein; GTP-binding protein HSR1-related; Miro domain protein; KEGG: rca:Rcas_1377 dynamin family protein
YP_001634585.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_1488 glycosyl transferase group 1
YP_001634586.1	PFAM: Colicin V production protein; KEGG: rrs:RoseRS_3247 colicin V production protein
YP_001634587.1	PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: rrs:RoseRS_3529 putative serine protein kinase, PrkA
YP_001634588.1	PFAM: protein of unknown function DUF444; KEGG: rca:Rcas_1380 protein of unknown function DUF444
YP_001634589.1	PFAM: SpoVR family protein; SMART: Hedgehog/intein hint domain protein; KEGG: rca:Rcas_1381 SpoVR family protein
YP_001634590.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_3059 ABC transporter related
YP_001634591.1	KEGG: rca:Rcas_0864 hypothetical protein
YP_001634592.1	KEGG: rca:Rcas_0863 hypothetical protein
YP_001634593.1	KEGG: rrs:RoseRS_0324 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region
YP_001634594.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
YP_001634595.1	catalyzes the degradation of histidine to urocanate and ammmonia
YP_001634596.1	KEGG: sth:STH3191 imidazolonepropionase; TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; Amidohydrolase 3
YP_001634597.1	catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism
YP_001634598.1	PFAM: protein of unknown function DUF990; KEGG: cyb:CYB_1041 hypothetical protein
YP_001634599.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: hma:pNG6056 copper-transporting ATPase CopA
YP_001634600.1	PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: net:Neut_0014 twin-arginine translocation pathway signal
YP_001634601.1	PFAM: cytochrome c class I; KEGG: rca:Rcas_2780 cytochrome c class I
YP_001634602.1	PFAM: Lytic transglycosylase catalytic; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; KEGG: rca:Rcas_2690 lytic transglycosylase catalytic
YP_001634603.1	PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2510 glycosyl transferase, group 1
YP_001634604.1	KEGG: rrs:RoseRS_1231 hypothetical protein
YP_001634605.1	PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rrs:RoseRS_2166 ATPase associated with various cellular activities, AAA_5
YP_001634606.1	PFAM: glycosyl transferase family 2; KEGG: sru:SRU_1194 glycosyl transferase-related protein
YP_001634607.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rca:Rcas_1939 DNA methylase N-4/N-6 domain protein
YP_001634608.1	TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: rca:Rcas_4076 phage SPO1 DNA polymerase-related protein
YP_001634609.1	KEGG: rrs:RoseRS_0874 hypothetical protein
YP_001634610.1	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: rrs:RoseRS_0875 beta-lactamase domain protein
YP_001634611.1	Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis
YP_001634612.1	PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3120 glycosyl transferase, group 1
YP_001634613.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rrs:RoseRS_2126 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001634614.1	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine
YP_001634615.1	PFAM: amine oxidase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_0137 amine oxidase
YP_001634616.1	PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: rca:Rcas_2240 SH3 type 3 domain protein
YP_001634617.1	PFAM: protein of unknown function DUF214; KEGG: rca:Rcas_0266 protein of unknown function DUF214
YP_001634618.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_0267 ABC transporter related
YP_001634619.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rca:Rcas_0268 efflux transporter, RND family, MFP subunit
YP_001634620.1	PFAM: regulatory protein TetR; KEGG: rrs:RoseRS_0266 transcriptional regulator, TetR family
YP_001634621.1	KEGG: rrs:RoseRS_1757 hypothetical protein
YP_001634623.1	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: rca:Rcas_1902 ammonium transporter
YP_001634624.1	KEGG: ace:Acel_0942 integral membrane protein
YP_001634626.1	KEGG: rca:Rcas_3353 hypothetical protein
YP_001634627.1	KEGG: rrs:RoseRS_4062 hypothetical protein
YP_001634628.1	KEGG: rca:Rcas_3351 hypothetical protein
YP_001634629.1	PFAM: alpha/beta hydrolase fold; KEGG: ade:Adeh_3847 alpha/beta hydrolase fold-1
YP_001634630.1	KEGG: rca:Rcas_0148 hypothetical protein
YP_001634631.1	PFAM: cytochrome oxidase assembly; KEGG: rrs:RoseRS_4134 cytochrome oxidase assembly
YP_001634632.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rrs:RoseRS_0094 peptidase M20
YP_001634633.1	TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mem:Memar_2467 anti-sigma-factor antagonist
YP_001634634.1	PFAM: cyclic nucleotide-binding; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sfu:Sfum_4027 cyclic nucleotide-binding protein
YP_001634635.1	PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: rca:Rcas_1245 PBS lyase heat domain protein repeat-containing protein
YP_001634637.1	KEGG: rrs:RoseRS_0091 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein
YP_001634638.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rrs:RoseRS_4542 molybdopterin oxidoreductase
YP_001634639.1	KEGG: bld:BLi02827 levanase; RBL00188
YP_001634641.1	KEGG: rca:Rcas_2717 hypothetical protein
YP_001634642.1	catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis
YP_001634643.1	PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: rrs:RoseRS_0825 uncharacterized MobA-related protein-like protein
YP_001634644.1	PFAM: ribosomal protein S6; KEGG: rca:Rcas_1526 ribosomal protein S6
YP_001634645.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: rrs:RoseRS_3401 single-strand binding protein
YP_001634646.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rrs:RoseRS_3399 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_001634647.1	KEGG: rrs:RoseRS_3398 hypothetical protein
YP_001634648.1	PFAM: extracellular solute-binding protein family 5; KEGG: deb:DehaBAV1_0943 extracellular solute-binding protein, family 5
YP_001634649.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: deb:DehaBAV1_0942 nickel-transporting ATPase
YP_001634650.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: deb:DehaBAV1_0941 binding-protein-dependent transport systems inner membrane component
YP_001634651.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_3775 acyl-CoA dehydrogenase domain protein
YP_001634652.1	PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: stp:Strop_3127 peptidase S15
YP_001634653.1	PFAM: glycoside hydrolase family 13 domain protein; KEGG: tpt:Tpet_0960 glycoside hydrolase, family 13 domain protein
YP_001634654.1	KEGG: rrs:RoseRS_2713 hypothetical protein
YP_001634655.1	PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: rca:Rcas_1200 ATPase AAA-2 domain protein
YP_001634656.1	PFAM: GAF domain protein; KEGG: rrs:RoseRS_2414 GAF sensor signal transduction histidine kinase
YP_001634657.1	KEGG: rca:Rcas_1280 hypothetical protein
YP_001634658.1	KEGG: rca:Rcas_3350 hypothetical protein
YP_001634659.1	KEGG: rca:Rcas_1522 hypothetical protein
YP_001634660.1	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids
YP_001634661.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2782 methyltransferase type 11
YP_001634662.1	KEGG: rca:Rcas_3341 hypothetical protein
YP_001634663.1	PFAM: cyclic nucleotide-binding; beta-lactamase domain protein; KEGG: lbl:LBL_1802 CAP family transcription factor
YP_001634664.1	PFAM: protein of unknown function DUF28; KEGG: rrs:RoseRS_4362 protein of unknown function DUF28
YP_001634665.1	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity
YP_001634666.1	KEGG: rrs:RoseRS_4047 hypothetical protein
YP_001634667.1	KEGG: rrs:RoseRS_2662 adenylyl cyclase class-3/4/guanylyl cyclase; PFAM: extracellular solute-binding protein family 5; Tetratricopeptide TPR_2 repeat protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase
YP_001634668.1	KEGG: rca:Rcas_2874 polymorphic outer membrane protein
YP_001634669.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_4536 methyltransferase type 11
YP_001634670.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1233 ABC transporter related
YP_001634672.1	TIGRFAM: photosynthetic reaction center, M subunit; PFAM: photosynthetic reaction centre protein; KEGG: rca:Rcas_3754 photosynthetic reaction center, M subunit
YP_001634673.1	TIGRFAM: photosynthetic reaction center L subunit; PFAM: photosynthetic reaction centre protein; KEGG: rrs:RoseRS_3268 photosynthetic reaction center, M subunit
YP_001634674.1	PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_2949 glycosyl transferase, family 2
YP_001634675.1	KEGG: rca:Rcas_1950 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase
YP_001634676.1	PFAM: VanW family protein; KEGG: rrs:RoseRS_0768 VanW family protein
YP_001634677.1	KEGG: rrs:RoseRS_0614 apurinic endonuclease Apn1; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2
YP_001634678.1	PFAM: helix-hairpin-helix motif; KEGG: aau:AAur_2244 putative comEA protein
YP_001634679.1	PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_2355 alpha/beta hydrolase fold
YP_001634680.1	PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rca:Rcas_1196 protein serine phosphatase with GAF(s) sensor(s)
YP_001634681.1	TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rca:Rcas_1195 anti-sigma-factor antagonist
YP_001634682.1	TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rca:Rcas_1194 anti-sigma-factor antagonist
YP_001634683.1	KEGG: rca:Rcas_4329 hypothetical protein
YP_001634684.1	PFAM: protein of unknown function DUF541; KEGG: swi:Swit_4746 protein of unknown function DUF541
YP_001634685.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
YP_001634686.1	PFAM: NERD domain protein; KEGG: rrs:RoseRS_1932 hypothetical protein
YP_001634687.1	PFAM: ATP-NAD/AcoX kinase; KEGG: rca:Rcas_0932 ATP-NAD/AcoX kinase
YP_001634688.1	KEGG: mul:MUL_4783 hypothetical protein
YP_001634689.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; dienelactone hydrolase; WD40 domain protein beta Propeller; KEGG: rca:Rcas_1375 peptidase S9 prolyl oligopeptidase active site domain protein
YP_001634690.1	SMART: helix-turn-helix domain protein
YP_001634691.1	catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase, encoded by lacD1 and lacD2; expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources
YP_001634692.1	KEGG: rca:Rcas_1783 hypothetical protein
YP_001634693.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rca:Rcas_1784 AMP-dependent synthetase and ligase
YP_001634694.1	PFAM: glycoside hydrolase family 3 domain protein; PA14 domain protein; KEGG: rrs:RoseRS_3480 glycoside hydrolase, family 3 domain protein
YP_001634695.1	PFAM: glycoside hydrolase family 16; KEGG: tpt:Tpet_0899 glycoside hydrolase, family 16
YP_001634696.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: sen:SACE_6502 glucan 1,4-beta-glucosidase precursor
YP_001634697.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rca:Rcas_3565 binding-protein-dependent transport systems inner membrane component
YP_001634698.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3281 sugar ABC transporter permease
YP_001634699.1	PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_3619 extracellular solute-binding protein, family 1
YP_001634700.1	KEGG: rca:Rcas_0540 coenzyme F390 synthetase-like protein
YP_001634701.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0627 ABC transporter related
YP_001634702.1	KEGG: rrs:RoseRS_0626 ABC-type branched-chain amino acid transport systems periplasmic component-like protein
YP_001634703.1	PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_0625 inner-membrane translocator
YP_001634704.1	PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_0624 inner-membrane translocator
YP_001634705.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rca:Rcas_0545 AMP-dependent synthetase and ligase
YP_001634706.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0622 ABC transporter related
YP_001634707.1	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate and N-acetyl-L-aminoadipate to form N-acetyl-L-aminoadipate 5-phosphate in arginine and lysine biosynthesis
YP_001634708.1	PFAM: cell wall hydrolase/autolysin; KEGG: rci:RCIX660 hypothetical protein
YP_001634709.1	KEGG: rrs:RoseRS_1205 hypothetical protein
YP_001634710.1	TIGRFAM: conserved repeat domain protein; LPXTG-motif cell wall anchor domain protein; PFAM: protein of unknown function DUF11; KEGG: bcz:BCZK3364 conserved repeat domain protein
YP_001634711.1	TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: bcz:BCZK3364 conserved repeat domain protein
YP_001634712.1	PFAM: alpha/beta hydrolase fold; KEGG: bta:505457 biphenyl hydrolase-like (serine hydrolase; breast epithelial mucin-associated antigen)
YP_001634713.1	PFAM: Hyalin; KEGG: mxa:MXAN_2109 hyalin repeat protein
YP_001634714.1	KEGG: rca:Rcas_2740 NADH-ubiquinone oxidoreductase chain 49kDa
YP_001634715.1	KEGG: rca:Rcas_2739 hypothetical protein
YP_001634716.1	KEGG: rrs:RoseRS_2670 hypothetical protein
YP_001634717.1	KEGG: rrs:RoseRS_2669 NADH/ubiquinone/plastoquinone (complex I)
YP_001634718.1	KEGG: rrs:RoseRS_2667 hypothetical protein
YP_001634719.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2666 ABC transporter related
YP_001634720.1	KEGG: rrs:RoseRS_2665 hypothetical protein
YP_001634721.1	PFAM: peptidase M23B; KEGG: rrs:RoseRS_4626 peptidase M23B
YP_001634722.1	PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rrs:RoseRS_2839 Orn/DAP/Arg decarboxylase 2
YP_001634723.1	PFAM: ROK family protein; KEGG: rrs:RoseRS_4247 ROK family protein
YP_001634724.1	PFAM: N-acylglucosamine 2-epimerase; KEGG: rca:Rcas_3784 N-acylglucosamine 2-epimerase
YP_001634725.1	KEGG: rca:Rcas_3333 hypothetical protein
YP_001634726.1	PFAM: extracellular solute-binding protein family 1; KEGG: tel:tlr2048 periplasmic sugar-binding protein of sugar ABC transporter
YP_001634727.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: syn:slr1202 putative ABC-type lactose transport system permease protein
YP_001634728.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tel:tll1382 sugar transport system permease protein
YP_001634729.1	PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; Glycoside hydrolase family 38 central region; KEGG: rxy:Rxyl_0070 glycoside hydrolase, family 38
YP_001634730.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: rxy:Rxyl_0629 beta-N-acetylhexosaminidase
YP_001634731.1	PFAM: sugar isomerase (SIS); KEGG: rrs:RoseRS_2367 glutamine--fructose-6-phosphate transaminase (isomerizing)
YP_001634732.1	PFAM: LmbE family protein; KEGG: rca:Rcas_1416 LmbE family protein
YP_001634733.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bvi:Bcep1808_1701 alcohol dehydrogenase, zinc-binding domain protein
YP_001634734.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rca:Rcas_0381 dTDP-4-dehydrorhamnose reductase
YP_001634735.1	PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: rrs:RoseRS_4602 ribonuclease III
YP_001634736.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: rca:Rcas_0379 beta-ketoacyl synthase
YP_001634737.1	PFAM: peptidase M50; KEGG: rca:Rcas_3682 peptidase M50
YP_001634738.1	TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: rrs:RoseRS_3928 GDP-mannose 4,6-dehydratase
YP_001634739.1	PFAM: helix-turn-helix domain protein
YP_001634740.1	catalyzes the interconversion of succinyl-CoA and succinate
YP_001634741.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_001634742.1	KEGG: rrs:RoseRS_3116 Zn-dependent hydrolase of the beta-lactamase fold-like protein
YP_001634743.1	PFAM: regulatory protein RecX; KEGG: rrs:RoseRS_3117 regulatory protein RecX
YP_001634744.1	PFAM: beta-lactamase domain protein; KEGG: tfu:Tfu_2040 similar to Zn-dependent hydrolase including glyoxylases
YP_001634745.1	PFAM: PSP1 domain protein; KEGG: rrs:RoseRS_1637 PSP1 domain protein
YP_001634746.1	PFAM: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase; GAF domain protein; KEGG: rrs:RoseRS_1638 putative adenylate/guanylate cyclase
YP_001634747.1	PFAM: regulatory protein MarR; iron dependent repressor; FeoA family protein; KEGG: rca:Rcas_0101 iron (metal) dependent repressor, DtxR family
YP_001634748.1	KEGG: rrs:RoseRS_1493 hypothetical protein
YP_001634749.1	KEGG: syf:Synpcc7942_1526 hypothetical protein
YP_001634750.1	PFAM: peptidase M14 carboxypeptidase A; KEGG: syn:sll0236 hypothetical protein
YP_001634751.1	PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: rca:Rcas_0099 protein serine/threonine phosphatase
YP_001634752.1	TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: rrs:RoseRS_4548 DNA mismatch repair protein MutL
YP_001634753.1	TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: rrs:RoseRS_2008 single-stranded-DNA-specific exonuclease RecJ
YP_001634754.1	PFAM: extracellular solute-binding protein family 1; KEGG: ter:Tery_2816 extracellular solute-binding protein, family 1
YP_001634756.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sat:SYN_01077 sensor proteinLuxQ
YP_001634757.1	PFAM: Tetratricopeptide TPR_4; KEGG: rrs:RoseRS_4293 tetratricopeptide TPR_2 repeat protein
YP_001634758.1	KEGG: dsy:DSY4876 hypothetical protein
YP_001634759.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cvi:CV_4135 hypothetical protein
YP_001634761.1	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
YP_001634762.1	KEGG: rrs:RoseRS_2560 hypothetical protein
YP_001634763.1	PFAM: FAD linked oxidase domain protein; KEGG: rca:Rcas_4144 FAD linked oxidase domain protein
YP_001634764.1	PFAM: FAD linked oxidase domain protein; KEGG: sus:Acid_1055 FAD linked oxidase domain protein
YP_001634766.1	PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_0202 glycosyl transferase family 2
YP_001634767.1	PFAM: cyclic nucleotide-binding; KEGG: rrs:RoseRS_4027 cyclic nucleotide-binding protein
YP_001634768.1	PFAM: extracellular solute-binding protein family 5; KEGG: rrs:RoseRS_0937 extracellular solute-binding protein, family 5
YP_001634769.1	KEGG: rca:Rcas_0424 AAA ATPase
YP_001634770.1	KEGG: rca:Rcas_0884 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase
YP_001634771.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tpt:Tpet_0896 ABC transporter related
YP_001634772.1	KEGG: tpt:Tpet_0895 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_001634773.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfu:PF1211 dipeptide ABC transporter, permease protein
YP_001634774.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pab:PAB0628 oligopeptide transport system permease protein
YP_001634775.1	PFAM: extracellular solute-binding protein family 5; KEGG: tpe:Tpen_1676 extracellular solute-binding protein, family 5
YP_001634776.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sma:SAV554 LacI-family transcriptional regulator
YP_001634777.1	KEGG: rrs:RoseRS_2858 hypothetical protein
YP_001634778.1	PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cya:CYA_0263 alpha-amylase family protein
YP_001634779.1	KEGG: cya:CYA_1097 trehalose synthase/putative maltokinase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_001634780.1	catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain
YP_001634781.1	KEGG: pth:PTH_1586 1,4-alpha-glucan branching enzyme; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_001634782.1	PFAM: glycoside hydrolase family 57; KEGG: mta:Moth_1810 glycoside hydrolase, family 57
YP_001634783.1	KEGG: gsu:GSU2360 maltooligosyltrehalose synthase, putative; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_001634785.1	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide
YP_001634786.1	PFAM: regulatory protein MarR; KEGG: bcy:Bcer98_0557 transcriptional regulator, MarR family
YP_001634787.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rca:Rcas_1203 efflux transporter, RND family, MFP subunit
YP_001634788.1	PFAM: protein of unknown function DUF214; KEGG: rca:Rcas_1126 protein of unknown function DUF214
YP_001634789.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: gka:GK2682 nucleotide sugar epimerase
YP_001634790.1	KEGG: rca:Rcas_3423 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein
YP_001634791.1	KEGG: mta:Moth_0515 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class V; aminotransferase class I and II
YP_001634792.1	KEGG: rrs:RoseRS_1616 hypothetical protein
YP_001634793.1	KEGG: rrs:RoseRS_1574 hypothetical protein
YP_001634794.1	KEGG: rrs:RoseRS_0528 hypothetical protein
YP_001634795.1	PFAM: manganese and iron superoxide dismutase; KEGG: gka:GK2457 manganese superoxide dismutase
YP_001634796.1	PFAM: regulatory protein ArsR; KEGG: rrs:RoseRS_3238 putative transcriptional regulator
YP_001634797.1	PFAM: Cobyrinic acid ac-diamide synthase; protein of unknown function DUF59; KEGG: rca:Rcas_1760 protein of unknown function DUF59
YP_001634798.1	KEGG: rrs:RoseRS_2110 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_001634799.1	molecular chaperone
YP_001634800.1	PFAM: major facilitator superfamily MFS_1; KEGG: mxa:MXAN_3677 major facilitator family transporter
YP_001634801.1	PFAM: Colicin V production protein; KEGG: rrs:RoseRS_4015 hypothetical protein
YP_001634802.1	KEGG: rca:Rcas_0062 MutS2 family protein; TIGRFAM: MutS2 family protein; PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: MutS III domain protein
YP_001634803.1	PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: rrs:RoseRS_3543 NADH dehydrogenase (ubiquinone), 24 kDa subunit
YP_001634804.1	PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: rrs:RoseRS_3542 NADH dehydrogenase (quinone)
YP_001634805.1	with HoxF and HoxE catalyzes H2-dependent NAD(P)+-reduction as well as NAD(P)H-dependent H2-evolution
YP_001634806.1	PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: ana:alr0764 hydrogenase small subunit
YP_001634807.1	PFAM: nickel-dependent hydrogenase large subunit; KEGG: rca:Rcas_1368 nickel-dependent hydrogenase large subunit
YP_001634808.1	TIGRFAM: hydrogenase maturation protease; KEGG: rrs:RoseRS_3538 hypothetical protein
YP_001634809.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rrs:RoseRS_0105 CDP-alcohol phosphatidyltransferase
YP_001634810.1	KEGG: rrs:RoseRS_0106 hypothetical protein
YP_001634811.1	KEGG: rrs:RoseRS_0107 hypothetical protein
YP_001634812.1	TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; KEGG: rca:Rcas_0347 competence/damage-inducible protein CinA
YP_001634814.1	TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase SAD; KEGG: rrs:RoseRS_0110 threonyl-tRNA synthetase
YP_001634815.1	KEGG: rca:Rcas_0350 hypothetical protein
YP_001634816.1	PFAM: cobalt transport protein; KEGG: sco:SCO2323 integral membrane protein
YP_001634817.1	TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: rrs:RoseRS_4584 cobalamin 5'-phosphate synthase
YP_001634818.1	PFAM: Phosphoglycerate mutase; KEGG: rca:Rcas_0171 phosphoglycerate mutase
YP_001634819.1	KEGG: stp:Strop_4398 hypothetical protein
YP_001634820.1	TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: afu:AF1398 hypothetical protein
YP_001634821.1	KEGG: fra:Francci3_2683 resolvase-like
YP_001634822.1	catalyzes N(2)-acetyl-L-lysine + H(2)O = acetate + L-lysine
YP_001634823.1	PFAM: ATP-binding region ATPase domain protein; KEGG: sen:SACE_4200 regulator of sigma factor
YP_001634825.1	KEGG: pab:PAB0067 DNA helicase related protein
YP_001634826.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; KEGG: pae:PA1979 probable two-component sensor
YP_001634827.1	TIGRFAM: arsenite oxidase, large subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: ttj:TTHB127 arsenite oxidase, large subunit
YP_001634828.1	TIGRFAM: arsenite oxidase, small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: rfr:Rfer_3085 twin-arginine translocation pathway signal
YP_001634829.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: sth:STH3096 two-component response regulator
YP_001634830.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rca:Rcas_0372 ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_001634831.1	PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; SAF domain protein; KEGG: ana:alr2831 probable NAD(P)-dependent oxidoreductase
YP_001634832.1	KEGG: ana:alr2830 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related
YP_001634833.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: fal:FRAAL6256 epimerase/dehydratase
YP_001634834.1	TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: gvi:gll2208 glucose-1-phosphate cytidylyltransferase
YP_001634835.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_3579 NAD-dependent epimerase/dehydratase
YP_001634836.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rca:Rcas_0203 NAD-dependent epimerase/dehydratase
YP_001634837.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rrs:RoseRS_3868 glutamine--scyllo-inositol transaminase
YP_001634838.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: rrs:RoseRS_0292 putative transcriptional regulator, Crp/Fnr family
YP_001634839.1	KEGG: rca:Rcas_0391 glucose/sorbosone dehydrogenase-like protein
YP_001634840.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: rrs:RoseRS_0082 phospholipid/glycerol acyltransferase
YP_001634841.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: rrs:RoseRS_0081 NAD-dependent epimerase/dehydratase
YP_001634842.1	TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: rrs:RoseRS_0080 death-on-curing family protein
YP_001634843.1	KEGG: rca:Rcas_0010 hypothetical protein
YP_001634844.1	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1
YP_001634845.1	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
YP_001634846.1	PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: rrs:RoseRS_0820 cell divisionFtsK/SpoIIIE
YP_001634847.1	KEGG: rca:Rcas_0445 hypothetical protein
YP_001634848.1	PFAM: peptidase M24; KEGG: rca:Rcas_2066 peptidase M24
YP_001634849.1	KEGG: rca:Rcas_0340 hypothetical protein
YP_001634850.1	KEGG: kra:Krad_3884 hypothetical protein
YP_001634851.1	PFAM: Rhodanese domain protein; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: rrs:RoseRS_4186 sulphate transporter
YP_001634852.1	type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese
YP_001634853.1	TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; KEGG: rca:Rcas_0552 RNA methyltransferase, TrmA family
YP_001634854.1	KEGG: rca:Rcas_3603 small GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: Miro domain protein; Ras family protein; SMART: Ras small GTPase, Ras type; Ras small GTPase, Rho type; Ras small GTPase, Rab type
YP_001634855.1	KEGG: rca:Rcas_3602 hypothetical protein
YP_001634856.1	KEGG: rca:Rcas_3601 hypothetical protein
YP_001634857.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: rca:Rcas_3600 histidine kinase
YP_001634858.1	PFAM: transposase IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4
YP_001634859.1	KEGG: rrs:RoseRS_0729 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller
YP_001634860.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rca:Rcas_1810 DNA methylase N-4/N-6 domain protein
YP_001634861.1	PFAM: protein of unknown function DUF255; KEGG: rrs:RoseRS_2279 protein of unknown function DUF255
YP_001634862.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_2261 glycosyl transferase group 1
YP_001634863.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rca:Rcas_2355 GCN5-related N-acetyltransferase
YP_001634864.1	TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: rca:Rcas_2354 ribosome small subunit-dependent GTPase A
YP_001634866.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rrs:RoseRS_3319 threonine dehydratase
YP_001634867.1	PFAM: aldo/keto reductase; KEGG: sus:Acid_1998 aldo/keto reductase
YP_001634868.1	SMART: PUA domain containing protein; KEGG: rrs:RoseRS_0887 PUA domain containing protein
YP_001634869.1	KEGG: rca:Rcas_4089 arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ
YP_001634870.1	PFAM: peptidase S16 lon domain protein; KEGG: rca:Rcas_4088 peptidase S16 lon domain protein
YP_001634871.1	PFAM: protein of unknown function DUF503; KEGG: drm:Dred_1275 protein of unknown function DUF503
YP_001634872.1	KEGG: rca:Rcas_4086 magnesium chelatase; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase
YP_001634873.1	PFAM: Protein of unknown function DUF1626; KEGG: rca:Rcas_2328 protein of unknown function DUF1626
YP_001634874.1	KEGG: rrs:RoseRS_0534 protein of unknown function DUF1626
YP_001634875.1	PFAM: aminotransferase class V; KEGG: rrs:RoseRS_4470 kynureninase
YP_001634876.1	KEGG: rrs:RoseRS_0503 polysaccharide deacetylase
YP_001634877.1	PFAM: Transglycosylase-associated protein; KEGG: bvi:Bcep1808_0933 transglycosylase-associated protein
YP_001634878.1	PFAM: SAICAR synthetase; KEGG: rca:Rcas_1843 phosphoribosylaminoimidazolesuccinocarboxamide synthase
YP_001634879.1	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
YP_001634880.1	KEGG: rrs:RoseRS_3180 ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; PFAM: Histidine biosynthesis protein HisG domain; ATP phosphoribosyltransferase catalytic region
YP_001634882.1	KEGG: rrs:RoseRS_3187 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein
YP_001634883.1	PFAM: response regulator receiver; KEGG: kra:Krad_3620 two component transcriptional regulator, winged helix family
YP_001634884.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0204 integral membrane sensor hybrid histidine kinase
YP_001634885.1	KEGG: rca:Rcas_2576 hypothetical protein
YP_001634886.1	PFAM: von Willebrand factor type A; KEGG: rca:Rcas_2575 von Willebrand factor type A
YP_001634887.1	KEGG: rca:Rcas_2578 hypothetical protein
YP_001634888.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rca:Rcas_0115 binding-protein-dependent transport systems inner membrane component
YP_001634889.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4567 binding-protein-dependent transport systems inner membrane component
YP_001634890.1	PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_4566 extracellular solute-binding protein, family 1
YP_001634892.1	PFAM: ribonuclease H; KEGG: rca:Rcas_1189 ribonuclease H
YP_001634893.1	PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; dihydrodipicolinate reductase; homoserine dehydrogenase NAD-binding; KEGG: reh:H16_A3348 dihydrodipicolinate reductase
YP_001634894.1	KEGG: sus:Acid_2155 hypothetical protein
YP_001634895.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mag:amb3351 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase
YP_001634896.1	KEGG: rci:RCIX531 predicted aminopeptidase
YP_001634897.1	PFAM: peptidase U32; KEGG: sus:Acid_6567 peptidase U32
YP_001634898.1	PFAM: Radical SAM domain protein; KEGG: rca:Rcas_3524 pyruvate-formate lyase-activating enzyme-like protein
YP_001634899.1	KEGG: rrs:RoseRS_2149 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein
YP_001634900.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_3522 glycosyl transferase group 1
YP_001634901.1	TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: rrs:RoseRS_3576 twin-arginine translocation protein, TatA/E family subunit
YP_001634902.1	TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; GTP1/OBG domain protein; KEGG: rca:Rcas_4265 GTP-binding protein Obg/CgtA
YP_001634903.1	PFAM: peptidase S10 serine carboxypeptidase; KEGG: dra:DR_0964 carboxypeptidase-related protein
YP_001634904.1	PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_4072 alpha/beta hydrolase fold
YP_001634905.1	PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: dge:Dgeo_1703 phage integrase
YP_001634906.1	KEGG: rrs:RoseRS_4189 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; SMART: PAC repeat-containing protein
YP_001634907.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rrs:RoseRS_0003 short-chain dehydrogenase/reductase SDR
YP_001634908.1	KEGG: rca:Rcas_3738 hypothetical protein
YP_001634909.1	TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: rrs:RoseRS_3248 iojap-like protein
YP_001634910.1	PFAM: Appr-1-p processing domain protein; KEGG: rca:Rcas_0425 Appr-1-p processing domain protein
YP_001634911.1	PFAM: PspC domain protein; KEGG: rca:Rcas_3130 phage shock protein C, PspC
YP_001634912.1	PFAM: protein of unknown function DUF92 transmembrane; KEGG: rca:Rcas_1824 protein of unknown function DUF92 transmembrane
YP_001634913.1	KEGG: rrs:RoseRS_2744 cyclase/dehydrase
YP_001634914.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rba:RB11273 bicyclomycin resistance protein
YP_001634915.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rxy:Rxyl_3167 GCN5-related N-acetyltransferase
YP_001634916.1	KEGG: gme:Gmet_3073 hypothetical protein
YP_001634917.1	PFAM: Radical SAM domain protein; KEGG: gvi:gll0887 hypothetical protein
YP_001634918.1	PFAM: VanW family protein; KEGG: rca:Rcas_0036 VanW family protein
YP_001634919.1	PFAM: Flp/Fap pilin component; KEGG: rca:Rcas_1121 Flp/Fap pilin component
YP_001634920.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_3762 histidine kinase
YP_001634921.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sco:SCO0925 LysR-family transcriptional regulator
YP_001634922.1	PFAM: UvrD/REP helicase; KEGG: rrs:RoseRS_0142 UvrD/REP helicase
YP_001634923.1	pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient
YP_001634924.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rca:Rcas_2460 putative PAS/PAC sensor protein
YP_001634925.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bpu:BPUM_0440 anti-anti-sigma-B regulator
YP_001634926.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rca:Rcas_2460 putative PAS/PAC sensor protein
YP_001634927.1	KEGG: rrs:RoseRS_1775 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; Prolyl-tRNA synthetase
YP_001634930.1	KEGG: art:Arth_3767 alpha-1,6-glucosidases, pullulanase-type; TIGRFAM: alpha-1,6-glucosidase, pullulanase-type; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_001634931.1	PFAM: Allophanate hydrolase subunit 1; KEGG: sth:STH379 putative allophanate hydrolase
YP_001634932.1	PFAM: LamB/YcsF family protein; KEGG: bbr:BB4479 hypothetical protein
YP_001634933.1	PFAM: major facilitator superfamily MFS_1; KEGG: dra:DR_1971 hypothetical protein
YP_001634934.1	PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2637 glycosyl transferase, group 1
YP_001634935.1	PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_3730 glycosyl transferase family 2
YP_001634936.1	TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: rrs:RoseRS_3298 dihydroxyacetone kinase, L subunit
YP_001634937.1	TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; PFAM: PTS system fructose subfamily IIA component; KEGG: rrs:RoseRS_3302 PTS system fructose subfamily IIA component
YP_001634938.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: rrs:RoseRS_3303 phosphotransferase system, phosphocarrier protein HPr
YP_001634939.1	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: rrs:RoseRS_3304 phosphoenolpyruvate-protein phosphotransferase
YP_001634940.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: rrs:RoseRS_2268 cupin 2, conserved barrel domain protein
YP_001634941.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; regulatory protein ArsR; KEGG: rca:Rcas_2316 transcriptional regulator, ArsR family
YP_001634942.1	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: tte:TTE2334 phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)
YP_001634943.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: tte:TTE1820 phosphotransferase system, HPr-related proteins
YP_001634944.1	PFAM: SAF domain protein; KEGG: bha:BH0774 hypothetical protein
YP_001634945.1	PFAM: PTS system glucitol/sorbitol-specific IIA component; KEGG: bcl:ABC1159 PTS system, glucitol-specific enzyme III
YP_001634946.1	PFAM: Sorbitol phosphotransferase protein II domain protein; KEGG: oan:Oant_4110 protein-N(pi)-phosphohistidine--sugar phosphotransferase
YP_001634947.1	KEGG: bha:BH0772 PTS system, glucitol/sorbitol-specific enzyme II, BC component (EIIBC-GUT)
YP_001634948.1	TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC subunit; PFAM: PTS system protein II sorbitol-specific factor; KEGG: cdf:CD2418 PTS system, glucitol/sorbitol-specific IIc2 component
YP_001634949.1	PFAM: Glucitol operon activator; KEGG: bld:BLi03867 hypothetical protein
YP_001634950.1	PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: tte:TTE0188 Dihydrolipoamide acyltransferases
YP_001634951.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: bpu:BPUM_1172 pyruvate dehydrogenase (acetyl-transferring) E1 component beta subunit
YP_001634952.1	PFAM: dehydrogenase E1 component; KEGG: bha:BH0776 acetoin dehydrogenase (TPP-dependent) alpha chain
YP_001634953.1	PFAM: putative sugar-binding domain protein; KEGG: amt:Amet_3230 transcriptional regulator, DeoR family
YP_001634954.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_3475 FAD dependent oxidoreductase
YP_001634955.1	KEGG: rrs:RoseRS_0660 uncharacterized membrane protein-like protein
YP_001634956.1	PFAM: TPR repeat-containing protein; glycosyl transferase family 39; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rca:Rcas_0532 tetratricopeptide TPR_4
YP_001634957.1	KEGG: afw:Anae109_2553 ferredoxin-like protein
YP_001634958.1	TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rrs:RoseRS_1506 cysteine synthase A
YP_001634959.1	KEGG: rca:Rcas_3911 hypothetical protein
YP_001634960.1	PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: rrs:RoseRS_3337 type I phosphodiesterase/nucleotide pyrophosphatase
YP_001634961.1	PFAM: prolipoprotein diacylglyceryl transferase; KEGG: rrs:RoseRS_3339 prolipoprotein diacylglyceryl transferase
YP_001634962.1	PFAM: sulfatase; KEGG: rrs:RoseRS_3340 sulfatase
YP_001634963.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rrs:RoseRS_4259 enoyl-CoA hydratase/isomerase
YP_001634964.1	PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: ttj:TTHB249 phenol hydroxylase component A
YP_001634965.1	KEGG: ttj:TTHB250 metapyrocatechase (catechol 2,3-dioxygenase); TIGRFAM: catechol 2,3 dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_001634966.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: rrs:RoseRS_2571 regulatory protein, IclR
YP_001634967.1	catalyzes the formation of acetyl-CoA from acetalaldehyde
YP_001634968.1	catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate
YP_001634969.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: rca:Rcas_2409 flavin reductase domain protein FMN-binding
YP_001634970.1	PFAM: alpha/beta hydrolase fold; KEGG: ttj:TTHB237 2-hydroxymuconic semialdehyde hydrolase
YP_001634971.1	TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: rrs:RoseRS_2575 4-oxalocrotonate tautomerase family enzyme
YP_001634972.1	PFAM: Hydratase/decarboxylase; KEGG: rrs:RoseRS_2576 hydratase/decarboxylase
YP_001634973.1	PFAM: Aldehyde Dehydrogenase_; KEGG: rrs:RoseRS_2577 aldehyde dehydrogenase
YP_001634974.1	PFAM: Hydratase/decarboxylase; KEGG: rrs:RoseRS_2578 4-oxalocrotonate decarboxylase
YP_001634975.1	KEGG: rca:Rcas_2404 hypothetical protein
YP_001634976.1	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs
YP_001634978.1	PFAM: protein of unknown function DUF427; KEGG: rrs:RoseRS_1298 protein of unknown function DUF427
YP_001634979.1	PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_3713 putative ABC transporter (substrate binding component)
YP_001634980.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aeh:Mlg_1084 binding-protein-dependent transport systems inner membrane component
YP_001634981.1	KEGG: mlo:mll7347 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_001634982.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aeh:Mlg_1085 binding-protein-dependent transport systems inner membrane component
YP_001634983.1	KEGG: rrs:RoseRS_3748 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase
YP_001634984.1	KEGG: rrs:RoseRS_0472 hypothetical protein
YP_001634985.1	PFAM: polysaccharide biosynthesis protein; KEGG: dsy:DSY3339 hypothetical protein
YP_001634986.1	PFAM: polysaccharide pyruvyl transferase; KEGG: eci:UTI89_C2317 putative galactokinase
YP_001634987.1	PFAM: glycosyl transferase group 1; KEGG: tte:TTE0658 predicted glycosyltransferase
YP_001634989.1	KEGG: rca:Rcas_0143 hypothetical protein
YP_001634990.1	PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: gsu:GSU0630 hypothetical protein
YP_001634991.1	catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers
YP_001634992.1	TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: rxy:Rxyl_2905 succinate-semialdehyde dehydrogenase (NAD(P)+)
YP_001634993.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_2925 amine oxidase
YP_001634994.1	PFAM: Amidase; KEGG: rca:Rcas_2243 amidase
YP_001634995.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rrs:RoseRS_3603 acetyl-CoA carboxylase, biotin carboxylase
YP_001634997.1	KEGG: rca:Rcas_2056 hypothetical protein
YP_001634998.1	PFAM: photosystem I assembly BtpA; KEGG: rrs:RoseRS_0541 photosystem I assembly BtpA
YP_001634999.1	PFAM: PfkB domain protein; KEGG: tth:TTC0063 sugar kinase
YP_001635000.1	KEGG: rrs:RoseRS_3026 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001635001.1	PFAM: initiation factor 2B related; KEGG: rrs:RoseRS_3027 initiation factor 2B related
YP_001635002.1	PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4383 glycosyl transferase, group 1
YP_001635003.1	PFAM: beta-lactamase domain protein; KEGG: bfr:BF2984 metal-dependent hydrolase
YP_001635004.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: rrs:RoseRS_1619 multi-sensor signal transduction histidine kinase
YP_001635005.1	PFAM: Na-Ca exchanger/integrin-beta4; KEGG: afw:Anae109_2925 hypothetical protein
YP_001635006.1	PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: cyb:CYB_0863 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase family protein
YP_001635007.1	involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water
YP_001635008.1	KEGG: aba:Acid345_1888 hypothetical protein
YP_001635009.1	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: rrs:RoseRS_2411 sigma 54 modulation protein/ribosomal protein S30EA
YP_001635010.1	KEGG: sat:SYN_00175 metal-dependent hydrolase
YP_001635011.1	KEGG: swo:Swol_0338 beta-lactamase-like protein
YP_001635012.1	KEGG: rrs:RoseRS_1517 coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductase-like protein
YP_001635013.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: sth:STH3163 two-component sensor histidine kinase
YP_001635014.1	PFAM: regulatory protein LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_3421 two component transcriptional regulator, LuxR family
YP_001635015.1	PFAM: peptidase domain protein
YP_001635016.1	PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_2662 adenylyl cyclase class-3/4/guanylyl cyclase
YP_001635017.1	KEGG: ace:Acel_1145 quinolinate synthetase complex, A subunit; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A
YP_001635018.1	KEGG: gvi:glr0846 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001635019.1	PFAM: transposase IS4 family protein; KEGG: mhu:Mhun_3123 transposase, IS4
YP_001635020.1	KEGG: gme:Gmet_2802 hypothetical protein
YP_001635022.1	TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: rca:Rcas_2340 LPXTG-motif cell wall anchor domain
YP_001635024.1	TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: ecp:ECP_2256 ADA regulatory protein
YP_001635025.1	KEGG: rca:Rcas_2156 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like
YP_001635026.1	KEGG: rxy:Rxyl_0275 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib
YP_001635027.1	KEGG: rca:Rcas_0442 hypothetical protein
YP_001635028.1	catalyzes the formation of L-tryptophan from indole and L-serine
YP_001635029.1	KEGG: syf:Synpcc7942_1076 osmotic signal transduction related protein
YP_001635030.1	TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: ana:all7255 zeta-carotene desaturase
YP_001635031.1	PFAM: CheW domain protein; KEGG: rrs:RoseRS_0995 putative CheW protein
YP_001635032.1	KEGG: cyb:CYB_1617 hypothetical protein
YP_001635033.1	KEGG: sru:SRU_1659 hypothetical protein
YP_001635034.1	KEGG: pin:Ping_1520 isoprenylcysteine carboxyl methyltransferase
YP_001635035.1	plays an essential role in ATP-dependent branch migration of the Holliday junction
YP_001635036.1	TIGRFAM: xanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: ooe:OEOE_0537 adenine/guanine phosphoribosyltransferase or related PRPP-binding protein
YP_001635037.1	PFAM: protein of unknown function DUF151; KEGG: rca:Rcas_0354 protein of unknown function DUF151
YP_001635038.1	PFAM: Peptidoglycan-binding LysM; peptidase M23B; protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: sth:STH2132 hypothetical protein
YP_001635039.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rrs:RoseRS_0116 cobyrinic acid a,c-diamide synthase
YP_001635040.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: rrs:RoseRS_0117 ParB-like partition protein
YP_001635041.1	PFAM: PfkB domain protein; KEGG: rca:Rcas_0357 PfkB domain protein
YP_001635042.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rca:Rcas_0358 CDP-alcohol phosphatidyltransferase
YP_001635043.1	TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: rca:Rcas_3984 glutamyl-tRNA(Gln) amidotransferase, C subunit
YP_001635044.1	KEGG: rrs:RoseRS_0230 hypothetical protein
YP_001635045.1	catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001635046.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: sth:STH1479 putative peptidase
YP_001635047.1	TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: rrs:RoseRS_4282 peptidase C60, sortase A and B
YP_001635049.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rca:Rcas_3605 methyltransferase type 11
YP_001635050.1	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP
YP_001635051.1	KEGG: rpe:RPE_2422 hypothetical protein
YP_001635052.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
YP_001635053.1	PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_4401 major facilitator superfamily MFS_1
YP_001635054.1	KEGG: stp:Strop_3843 hypothetical protein
YP_001635056.1	PFAM: beta-lactamase domain protein; KEGG: sen:SACE_3051 metallo-beta-lactamase-like protein
YP_001635057.1	KEGG: rca:Rcas_1219 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region
YP_001635058.1	PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; KEGG: rrs:RoseRS_3189 HhH-GPD family protein
YP_001635059.1	PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rca:Rcas_3114 multi-sensor signal transduction histidine kinase
YP_001635060.1	PFAM: fumarate lyase; KEGG: rrs:RoseRS_3341 fumarate lyase
YP_001635061.1	PFAM: Lecithin:cholesterol acyltransferase; PGAP1 family protein; KEGG: bca:BCE_1868 hypothetical protein
YP_001635062.1	KEGG: rca:Rcas_0442 hypothetical protein
YP_001635063.1	PFAM: blue (type 1) copper domain protein; KEGG: rca:Rcas_2950 hypothetical protein
YP_001635064.1	KEGG: rca:Rcas_3521 hypothetical protein
YP_001635065.1	TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: rrs:RoseRS_2983 glutamine synthetase, type I
YP_001635066.1	TIGRFAM: cysteine desulfurase NifS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rca:Rcas_4262 aminotransferase class V
YP_001635067.1	KEGG: pth:PTH_1929 hypothetical protein
YP_001635068.1	PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: hne:HNE_0979 hypothetical protein
YP_001635070.1	KEGG: rca:Rcas_4332 hypothetical protein
YP_001635071.1	KEGG: rca:Rcas_4331 hypothetical protein
YP_001635073.1	TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: rca:Rcas_1086 methionine aminopeptidase, type I
YP_001635074.1	PFAM: methylenetetrahydrofolate reductase; KEGG: rca:Rcas_3006 methylenetetrahydrofolate reductase
YP_001635075.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: olu:OSTLU_33390 cystathione gamma synthase
YP_001635076.1	PFAM: Methyltransferase type 11; KEGG: fjo:Fjoh_1761 methyltransferase type 11
YP_001635077.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_4349 GCN5-related N-acetyltransferase
YP_001635078.1	TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: rca:Rcas_0702 acetyl-CoA acetyltransferase
YP_001635079.1	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_001635080.1	KEGG: rrs:RoseRS_4346 hypothetical protein
YP_001635081.1	PFAM: transcriptional activator domain; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_4345 transcriptional activator domain
YP_001635083.1	TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: rso:RSc2170 hypothetical protein
YP_001635084.1	PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: pho:PH0421 lipopolysaccharide O-side chain biosynthesis protein (O-antigen transpoter)
YP_001635085.1	PFAM: glycosyl transferase family 2; KEGG: rha:RHA1_ro05764 possible glycosyltransferase
YP_001635086.1	PFAM: response regulator receiver; KEGG: azo:azo3457 putative pilus biogenese protein
YP_001635087.1	KEGG: gsu:GSU1426 RsbW protein, putative
YP_001635088.1	PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: gme:Gmet_2818 putative PAS/PAC sensor protein
YP_001635089.1	TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: stp:Strop_4032 anti-anti-sigma factor
YP_001635090.1	PFAM: transferase hexapeptide repeat containing protein; sugar transferase; Nucleotidyl transferase; KEGG: drm:Dred_2334 nucleotidyl transferase
YP_001635091.1	KEGG: cpe:CPE0496 N-acetyl-mannosamine transferase; TIGRFAM: anti-anti-sigma factor; glycosyl transferase, WecB/TagA/CpsF family; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; glycosyl transferase WecB/TagA/CpsF
YP_001635092.1	PFAM: sugar transferase; KEGG: plt:Plut_1363 undecaprenyl-phosphate galactosephosphotransferase
YP_001635093.1	KEGG: cne:CNH00030 Alpha-L-arabinofuranosidase
YP_001635095.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: bch:Bcen2424_2942 transferase hexapeptide repeat containing protein
YP_001635096.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: tbd:Tbd_0282 polysaccharide chain length determinant protein
YP_001635097.1	KEGG: bra:BRADO4812 putative exopolysaccharide polymerization protein, ExoP-like
YP_001635099.1	KEGG: mxa:MXAN_7442 hypothetical protein
YP_001635100.1	KEGG: rrs:RoseRS_0528 hypothetical protein
YP_001635101.1	KEGG: sus:Acid_3667 hypothetical protein
YP_001635102.1	KEGG: gme:Gmet_2802 hypothetical protein
YP_001635103.1	KEGG: rso:RSp0990 TIS1421-transposase protein A
YP_001635104.1	PFAM: transposase IS4 family protein; KEGG: asa:ASA_0455 transposase B
YP_001635105.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rca:Rcas_0988 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001635106.1	PFAM: transposase IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4
YP_001635107.1	KEGG: gme:Gmet_2802 hypothetical protein
YP_001635108.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rca:Rcas_0988 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001635109.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: rle:RL0237 putative exopolysaccharide related transporter
YP_001635110.1	KEGG: rca:Rcas_1031 hypothetical protein
YP_001635111.1	KEGG: rrs:RoseRS_3124 DNA polymerase, beta domain protein region
YP_001635112.1	PFAM: HEPN domain protein; KEGG: rrs:RoseRS_0085 HEPN domain protein
YP_001635113.1	KEGG: rca:Rcas_4266 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase
YP_001635114.1	KEGG: rrs:RoseRS_1099 glycosyl transferase, family 39
YP_001635116.1	TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: ana:all4422 UDP-N-acetyl-D-mannosamine transferase
YP_001635117.1	PFAM: glycosyl transferase group 1; KEGG: rpd:RPD_1110 glycosyl transferase, group 1
YP_001635118.1	PFAM: glycosyl transferase group 1; KEGG: dge:Dgeo_2655 glycosyl transferase, group 1
YP_001635119.1	PFAM: O-antigen polymerase; KEGG: aba:Acid345_2587 O-antigen polymerase
YP_001635120.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mca:MCA2546 hypothetical protein
YP_001635121.1	PFAM: polysaccharide biosynthesis protein; KEGG: cpf:CPF_0474 putative polysaccharide transporter protein
YP_001635122.1	PFAM: NodS family protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: tfu:Tfu_0944 similar to 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase
YP_001635123.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein
YP_001635124.1	PFAM: cytochrome P450; KEGG: mxa:MXAN_2304 cytochrome P450 family protein
YP_001635125.1	PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: rrs:RoseRS_2652 phosphomannomutase
YP_001635126.1	PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: rca:Rcas_2719 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II
YP_001635127.1	PFAM: protein of unknown function UPF0052 and CofD; KEGG: rca:Rcas_2718 protein of unknown function UPF0052 and CofD
YP_001635128.1	PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_1914 alpha/beta hydrolase fold
YP_001635129.1	KEGG: rrs:RoseRS_2365 hypothetical protein
YP_001635131.1	PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2339 glycosyl transferase, group 1
YP_001635133.1	PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: rca:Rcas_0434 cytochrome c biogenesis protein transmembrane region
YP_001635134.1	PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_4202 NUDIX hydrolase
YP_001635135.1	TIGRFAM: trigger factor; PFAM: peptidylprolyl isomerase FKBP-type; trigger factor domain protein; trigger factor domain; KEGG: rca:Rcas_1477 trigger factor
YP_001635136.1	PFAM: peptidase S14 ClpP; KEGG: rrs:RoseRS_3662 endopeptidase Clp
YP_001635137.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rca:Rcas_0421 two component transcriptional regulator, winged helix family
YP_001635138.1	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate
YP_001635139.1	PFAM: glycosyl transferase family 4; KEGG: rrs:RoseRS_0580 glycosyl transferase, family 4
YP_001635140.1	PFAM: cyclic nucleotide-binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rrs:RoseRS_3166 cyclic nucleotide-binding protein
YP_001635141.1	PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: rca:Rcas_0715 aldehyde ferredoxin oxidoreductase
YP_001635142.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
YP_001635143.1	TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase class Ic; KEGG: rca:Rcas_2320 glutamyl-tRNA synthetase
YP_001635144.1	PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: asa:ASA_0164 maltodextrin glucosidase
YP_001635146.1	KEGG: rca:Rcas_4255 ferredoxin--NADP(+) reductase
YP_001635147.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_0801 glycosyl transferase group 1
YP_001635148.1	KEGG: rca:Rcas_3206 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase
YP_001635149.1	KEGG: rca:Rcas_2517 hypothetical protein
YP_001635150.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: spe:Spro_1340 protein of unknown function DUF6 transmembrane
YP_001635151.1	PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: cth:Cthe_0638 FHA domain containing protein
YP_001635155.1	KEGG: fal:FRAAL0895 hypothetical protein; putative coiled-coil domain
YP_001635156.1	KEGG: rrs:RoseRS_3614 beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1
YP_001635157.1	PFAM: major facilitator superfamily MFS_1; KEGG: rca:Rcas_4421 major facilitator superfamily MFS_1
YP_001635158.1	TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: rca:Rcas_0015 cell envelope-related transcriptional attenuator
YP_001635159.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: ilo:IL1172 secreted dipeptidyl aminopeptidase
YP_001635160.1	protein associated with Co2+ and Mg2+ efflux
YP_001635161.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rca:Rcas_0253 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_001635162.1	PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; KEGG: rrs:RoseRS_3600 fibronectin-binding A domain protein
YP_001635163.1	Essential for recycling GMP and indirectly, cGMP
YP_001635164.1	KEGG: rca:Rcas_4285 GatB/YqeY domain protein
YP_001635165.1	KEGG: rca:Rcas_4284 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; metal-dependent phosphohydrolase 7TM extracellular region; SMART: metal-dependent phosphohydrolase HD region
YP_001635166.1	KEGG: rrs:RoseRS_3628 hypothetical protein
YP_001635167.1	KEGG: rrs:RoseRS_3536 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001635168.1	KEGG: rrs:RoseRS_1741 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_001635169.1	PFAM: beta-lactamase domain protein; KEGG: rrs:RoseRS_2143 beta-lactamase domain protein
YP_001635170.1	PFAM: intradiol ring-cleavage dioxygenase; KEGG: dge:Dgeo_2841 intradiol ring-cleavage dioxygenase
YP_001635171.1	PFAM: SCP-like extracellular; KEGG: rrs:RoseRS_3153 allergen V5/TPX-1 family protein
YP_001635172.1	PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rrs:RoseRS_0587 ATPase associated with various cellular activities, AAA_3
YP_001635173.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rca:Rcas_0977 enoyl-CoA hydratase/isomerase
YP_001635174.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_2655 GCN5-related N-acetyltransferase
YP_001635175.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rca:Rcas_3425 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_001635176.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rca:Rcas_3427 transcriptional regulator, Crp/Fnr family
YP_001635177.1	PFAM: HpcH/HpaI aldolase; KEGG: pla:Plav_1789 HpcH/HpaI aldolase
YP_001635178.1	TIGRFAM: nitrite reductase, copper-containing; PFAM: blue (type 1) copper domain protein; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: sth:STH741 major anaerobically induced outer membrane protein
YP_001635179.1	PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4518 glycosyl transferase, family 2
YP_001635180.1	PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: rrs:RoseRS_0382 myo-inositol-1-phosphate synthase
YP_001635181.1	KEGG: rca:Rcas_3792 hypothetical protein
YP_001635182.1	PFAM: protein of unknown function DUF86; KEGG: rrs:RoseRS_4529 protein of unknown function DUF86
YP_001635183.1	PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_4528 DNA polymerase, beta domain protein region
YP_001635184.1	PFAM: YbbR family protein; KEGG: rca:Rcas_3985 YbbR family protein
YP_001635185.1	PFAM: protein of unknown function DUF147; KEGG: rrs:RoseRS_1145 protein of unknown function DUF147
YP_001635186.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_1146 tetratricopeptide TPR_2 repeat protein
YP_001635187.1	TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: rrs:RoseRS_2405 ornithine carbamoyltransferase
YP_001635188.1	PFAM: IstB domain protein ATP-binding protein; Chromosomal replication initiator DnaA; SMART: AAA ATPase; KEGG: rrs:RoseRS_1147 IstB domain protein ATP-binding protein
YP_001635189.1	TIGRFAM: primosome, DnaD subunit; KEGG: rrs:RoseRS_1148 primosome, DnaD subunit
YP_001635190.1	PFAM: major facilitator superfamily MFS_1; KEGG: rca:Rcas_0829 major facilitator superfamily MFS_1
YP_001635191.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: rca:Rcas_2049 single-strand binding protein
YP_001635192.1	PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sru:SRU_1122 FixL-related histidine kinase
YP_001635193.1	PFAM: NLP/P60 protein; protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: rca:Rcas_1215 NLP/P60 protein
YP_001635195.1	KEGG: rrs:RoseRS_3431 hypothetical protein
YP_001635196.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_1669 ABC transporter related
YP_001635197.1	PFAM: protein of unknown function DUF95 transmembrane; KEGG: rca:Rcas_1668 protein of unknown function DUF95 transmembrane
YP_001635198.1	KEGG: mjl:Mjls_0743 hypothetical protein
YP_001635199.1	PFAM: major facilitator superfamily MFS_1; KEGG: nfa:nfa33380 putative transporter
YP_001635201.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_1288 glycosyl transferase group 1
YP_001635202.1	KEGG: tbd:Tbd_2628 hypothetical protein
YP_001635203.1	KEGG: rrs:RoseRS_3483 hypothetical protein
YP_001635205.1	PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_1662 glycosyl transferase family 2
YP_001635206.1	PFAM: peptidase M16 domain protein; Peptidase M16C associated domain protein; KEGG: rrs:RoseRS_0158 peptidase M16C associated domain protein
YP_001635207.1	PFAM: Amidase; KEGG: mxa:MXAN_3566 amidase
YP_001635208.1	TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: rca:Rcas_1511 amidophosphoribosyltransferase
YP_001635209.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: rrs:RoseRS_0927 peptidase S8 and S53, subtilisin, kexin, sedolisin
YP_001635210.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_2180 drug resistance transporter, EmrB/QacA subfamily
YP_001635211.1	KEGG: rca:Rcas_0154 hypothetical protein
YP_001635212.1	PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_1696 FHA domain containing protein
YP_001635213.1	PFAM: CBS domain containing protein; protein of unknown function DUF190; KEGG: rrs:RoseRS_1697 protein of unknown function DUF190
YP_001635214.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_0130 NAD-dependent epimerase/dehydratase
YP_001635215.1	PFAM: PHP domain protein; AAA-4 family protein; SMART: phosphoesterase PHP domain protein; KEGG: rrs:RoseRS_1312 AAA-4 family protein
YP_001635216.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rca:Rcas_3262 two component transcriptional regulator, LuxR family
YP_001635217.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: smd:Smed_2404 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001635218.1	PFAM: peptidase M48 Ste24p; KEGG: rrs:RoseRS_1982 peptidase M48, Ste24p
YP_001635219.1	KEGG: rrs:RoseRS_1607 hypothetical protein
YP_001635220.1	KEGG: rrs:RoseRS_1947 hypothetical protein
YP_001635221.1	PFAM: amino acid-binding ACT domain protein; malic protein domain protein; malic protein NAD-binding; KEGG: rrs:RoseRS_2286 malate dehydrogenase (oxaloacetate-decarboxylating)
YP_001635223.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
YP_001635224.1	PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: rrs:RoseRS_3477 CobB/CobQ domain protein glutamine amidotransferase
YP_001635225.1	TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: putative RNA methylase; methyltransferase small; ribosomal L11 methyltransferase; KEGG: rrs:RoseRS_3525 modification methylase, HemK family
YP_001635226.1	KEGG: rca:Rcas_4081 hypothetical protein
YP_001635227.1	PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: rrs:RoseRS_0879 alpha/beta hydrolase fold
YP_001635228.1	KEGG: rrs:RoseRS_1899 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; Helicase-like, DEXD box c2 type; helicase c2; DEAD-like helicases
YP_001635229.1	PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; KEGG: rrs:RoseRS_1633 two component transcriptional regulator, LuxR family
YP_001635230.1	TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: rrs:RoseRS_1634 maf protein
YP_001635231.1	KEGG: rrs:RoseRS_0413 ABC-type dipeptide transport system periplasmic component-like protein
YP_001635232.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rca:Rcas_1059 binding-protein-dependent transport systems inner membrane component
YP_001635233.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rca:Rcas_1060 binding-protein-dependent transport systems inner membrane component
YP_001635234.1	KEGG: rrs:RoseRS_0416 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_001635235.1	KEGG: rrs:RoseRS_0417 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_001635236.1	TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_2193 nuclease SbcCD, D subunit
YP_001635237.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: rle:pRL90151 putative GFO/IDH/MocA family oxidoreductase
YP_001635238.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rle:pRL90152 putative pleiotropic regulator
YP_001635239.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: mag:amb0108 nucleoside-diphosphate-sugar epimerase
YP_001635240.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rle:pRL90155 putative DegT/DnrJ/EryC1/StrS family aminotransferase
YP_001635241.1	PFAM: glycosyl transferase family 2; KEGG: ter:Tery_3238 glycosyl transferase, family 2
YP_001635242.1	PFAM: polysaccharide deacetylase; KEGG: bha:BH1917 chitooligosaccharide deacetylase
YP_001635243.1	PFAM: glycosyl transferase family 2; KEGG: mva:Mvan_2680 glycosyl transferase, family 2
YP_001635244.1	PFAM: glycosyl transferase family 2; KEGG: rha:RHA1_ro05764 possible glycosyltransferase
YP_001635245.1	PFAM: glycosyl transferase family 2; KEGG: mva:Mvan_2680 glycosyl transferase, family 2
YP_001635247.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: ncr:NCU05153.1 hypothetical protein Pfam: Hexapep
YP_001635248.1	PFAM: glycosyl transferase family 2; KEGG: mxa:MXAN_7448 glycosyl transferase, group 2 family protein
YP_001635249.1	KEGG: tel:tlr0851 serine acetyltransferase
YP_001635250.1	PFAM: glycosyl transferase group 1; KEGG: cgt:cgR_0028 hypothetical protein
YP_001635252.1	KEGG: sde:Sde_2285 hypothetical protein
YP_001635253.1	PFAM: aminotransferase class I and II; KEGG: rrs:RoseRS_0703 aminotransferase, class I and II
YP_001635254.1	KEGG: rrs:RoseRS_3200 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase alpha subunit
YP_001635255.1	TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: rca:Rcas_2927 acetyl-CoA carboxylase, carboxyl transferase, beta subunit
YP_001635256.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rrs:RoseRS_2721 pyridoxamine 5'-phosphate oxidase-related, FMN-binding
YP_001635257.1	KEGG: rrs:RoseRS_1018 hypothetical protein
YP_001635258.1	PFAM: GAF domain protein; KEGG: rrs:RoseRS_3816 diguanylate cyclase with PAS/PAC sensor
YP_001635259.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: syf:Synpcc7942_2096 diguanylate cyclase (GGDEF domain)
YP_001635260.1	PFAM: Cna B domain protein; KEGG: rrs:RoseRS_1743 Cna B domain protein
YP_001635261.1	PFAM: Phosphoglycerate mutase; KEGG: rca:Rcas_4252 phosphoglycerate mutase
YP_001635262.1	KEGG: rrs:RoseRS_0007 hypothetical protein
YP_001635263.1	KEGG: rrs:RoseRS_0006 hypothetical protein
YP_001635264.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-4 domain protein; PAS fold domain protein; KEGG: rca:Rcas_1037 putative PAS/PAC sensor protein
YP_001635265.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV5847 putative ABC transporter ATP-binding subunit
YP_001635266.1	PFAM: aminotransferase class V; KEGG: rrs:RoseRS_1377 aminotransferase, class V
YP_001635267.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
YP_001635268.1	TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: rxy:Rxyl_2864 peptide methionine sulfoxide reductase
YP_001635269.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: rrs:RoseRS_2082 iron-containing alcohol dehydrogenase
YP_001635270.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
YP_001635271.1	PFAM: CheW domain protein; KEGG: rca:Rcas_4203 CheW protein
YP_001635272.1	KEGG: rrs:RoseRS_0038 hypothetical protein
YP_001635273.1	PFAM: chemotaxis sensory transducer; KEGG: rrs:RoseRS_0037 methyl-accepting chemotaxis sensory transducer
YP_001635274.1	PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: rrs:RoseRS_0036 CheA signal transduction histidine kinase
YP_001635275.1	PFAM: response regulator receiver; KEGG: rrs:RoseRS_0035 response regulator receiver protein
YP_001635276.1	PFAM: CheB methylesterase; response regulator receiver; KEGG: rca:Rcas_4208 response regulator receiver modulated CheB methylesterase
YP_001635277.1	KEGG: rrs:RoseRS_0033 protein-glutamate O-methyltransferase; PFAM: MCP methyltransferase CheR-type; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein
YP_001635278.1	PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rca:Rcas_4210 protein serine/threonine phosphatase
YP_001635279.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rca:Rcas_4211 TPR repeat-containing protein
YP_001635280.1	PFAM: ATP-binding region ATPase domain protein; KEGG: rrs:RoseRS_0030 putative anti-sigma regulatory factor, serine/threonine protein kinase
YP_001635281.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rca:Rcas_4213 anti-sigma-factor antagonist
YP_001635282.1	TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; KEGG: aba:Acid345_1483 L-lactate dehydrogenase
YP_001635283.1	PFAM: response regulator receiver; KEGG: rrs:RoseRS_0337 response regulator receiver protein
YP_001635284.1	KEGG: rca:Rcas_0845 response regulator receiver modulated metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: response regulator receiver; GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_001635285.1	PFAM: restriction endonuclease; SH3 type 3 domain protein; KEGG: rca:Rcas_0474 restriction endonuclease
YP_001635286.1	KEGG: rrs:RoseRS_3713 hypothetical protein
YP_001635287.1	KEGG: rrs:RoseRS_4040 hypothetical protein
YP_001635288.1	KEGG: rrs:RoseRS_1641 spermidine/putrescine ABC transporter ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase
YP_001635289.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1642 binding-protein-dependent transport systems inner membrane component
YP_001635290.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1644 ornithine carbamoyltransferase
YP_001635291.1	PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_1645 extracellular solute-binding protein, family 1
YP_001635292.1	KEGG: rca:Rcas_0802 4-vinyl reductase 4VR
YP_001635293.1	PFAM: pentapeptide repeat protein; KEGG: tel:tll0709 hypothetical protein
YP_001635294.1	TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: rca:Rcas_4419 excinuclease ABC, A subunit
YP_001635295.1	PFAM: protein of unknown function DUF333; KEGG: rrs:RoseRS_3072 hypothetical protein
YP_001635296.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: rrs:RoseRS_3071 uncharacterized peroxidase-related enzyme
YP_001635297.1	PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: rrs:RoseRS_1675 catalytic domain of components of various dehydrogenase complexes
YP_001635298.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: rrs:RoseRS_2416 transketolase, central region
YP_001635299.1	PFAM: dehydrogenase E1 component; KEGG: gtn:GTNG_2307 2-oxoisovalerate dehydrogenase alpha subunit
YP_001635300.1	PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: rrs:RoseRS_0306 hypothetical protein
YP_001635301.1	PFAM: glycoside hydrolase family 18; SMART: chitinase II; KEGG: rca:Rcas_0236 glycoside hydrolase family 18
YP_001635302.1	PFAM: protein of unknown function DUF1025; KEGG: rrs:RoseRS_0308 protein of unknown function DUF1025
YP_001635303.1	PFAM: peptidase M18 aminopeptidase I; peptidase M20; peptidase M42 family protein; KEGG: rrs:RoseRS_0349 peptidase M42 family protein
YP_001635304.1	PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: rca:Rcas_2006 Glu/Leu/Phe/Val dehydrogenase
YP_001635306.1	PFAM: peptidase membrane zinc metallopeptidase putative; KEGG: rca:Rcas_1508 peptidase membrane zinc metallopeptidase putative
YP_001635308.1	TIGRFAM: uridine kinase; PFAM: phosphoribulokinase/uridine kinase; KEGG: sru:SRU_0527 uridine kinase
YP_001635309.1	PFAM: protein of unknown function DUF472; KEGG: plt:Plut_0935 hypothetical protein
YP_001635310.1	PFAM: Dual specificity protein phosphatase; KEGG: rca:Rcas_3944 dual specificity protein phosphatase
YP_001635311.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_2427 GCN5-related N-acetyltransferase
YP_001635312.1	KEGG: rrs:RoseRS_2306 hypothetical protein
YP_001635313.1	PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_0424 glycosyl transferase, group 1
YP_001635314.1	PFAM: regulatory protein MarR; KEGG: stp:Strop_0417 transcriptional regulator, MarR family
YP_001635315.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2719 ABC transporter related
YP_001635316.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2717 ABC transporter related
YP_001635317.1	KEGG: rrs:RoseRS_1520 FHA domain containing protein
YP_001635318.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_001635319.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_001635320.1	PFAM: ferric-uptake regulator; KEGG: rrs:RoseRS_1293 ferric uptake regulator, Fur family
YP_001635321.1	KEGG: rrs:RoseRS_1263 hypothetical protein
YP_001635322.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_1262 GCN5-related N-acetyltransferase
YP_001635323.1	PFAM: SH3 type 3 domain protein; SMART: serine/threonine protein kinase; KEGG: rrs:RoseRS_1259 protein kinase
YP_001635324.1	PFAM: aminotransferase class-III; KEGG: rrs:RoseRS_1738 aminotransferase class-III
YP_001635325.1	PFAM: cyclic nucleotide-binding; KEGG: rrs:RoseRS_2624 cyclic nucleotide-binding protein
YP_001635326.1	TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: cya:CYA_2257 ribokinase
YP_001635327.1	KEGG: rca:Rcas_4397 hypothetical protein
YP_001635328.1	KEGG: rrs:RoseRS_1048 hypothetical protein
YP_001635329.1	KEGG: rrs:RoseRS_1049 hypothetical protein
YP_001635330.1	KEGG: rrs:RoseRS_1050 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_001635331.1	KEGG: tel:tlr1982 probable lipase
YP_001635332.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: maq:Maqu_0905 (2Fe-2S)-binding domain protein
YP_001635333.1	PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: ade:Adeh_3102 molybdopterin-binding xanthine dehydrogenase
YP_001635334.1	PFAM: protein of unknown function DUF512; KEGG: rrs:RoseRS_2144 protein of unknown function DUF512
YP_001635335.1	PFAM: GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: rca:Rcas_3527 metal dependent phosphohydrolase
YP_001635336.1	TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: rrs:RoseRS_1454 glutamine amidotransferase of anthranilate synthase
YP_001635337.1	KEGG: cac:CAC1097 hypothetical protein
YP_001635338.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mba:Mbar_A0777 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase
YP_001635339.1	PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: rrs:RoseRS_3624 methylated-DNA-(protein)-cysteine S-methyltransferase
YP_001635340.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: afw:Anae109_0558 major facilitator superfamily MFS_1
YP_001635342.1	PFAM: alpha/beta hydrolase fold; KEGG: cte:CT1312 lipase, putative
YP_001635343.1	PFAM: polysaccharide deacetylase; KEGG: rrs:RoseRS_3365 polysaccharide deacetylase
YP_001635344.1	PFAM: ABC-2 type transporter; KEGG: rrs:RoseRS_3367 ABC-2 type transporter
YP_001635345.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0858 ABC transporter related
YP_001635346.1	KEGG: rrs:RoseRS_2676 glycosyl transferase, group 1
YP_001635347.1	PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: rrs:RoseRS_3368 glycosyl transferase, family 2
YP_001635348.1	KEGG: rrs:RoseRS_3370 hypothetical protein
YP_001635349.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_1988 glycosyl transferase group 1
YP_001635350.1	SMART: Pyrrolo-quinoline quinone; KEGG: mac:MA0850 cell surface protein
YP_001635351.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ret:RHE_PB00053 probable nucleoside diphosphate epimerase protein
YP_001635352.1	KEGG: rrs:RoseRS_1717 hypothetical protein
YP_001635353.1	PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_0855 glycosyl transferase, group 1
YP_001635354.1	PFAM: aminotransferase class V; KEGG: sfu:Sfum_0911 aminotransferase, class V
YP_001635355.1	PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_2485 alpha/beta hydrolase fold
YP_001635356.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_001635357.1	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_001635358.1	PFAM: TrkA-N domain protein; KEGG: rca:Rcas_0931 TrkA-N domain protein
YP_001635359.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: sil:SPO2529 hypothetical protein
YP_001635360.1	PFAM: Auxin Efflux Carrier; KEGG: rca:Rcas_2903 auxin efflux carrier
YP_001635362.1	TIGRFAM: conserved repeat domain protein; KEGG: bcz:BCZK3364 conserved repeat domain protein
YP_001635363.1	KEGG: rca:Rcas_3115 hypothetical protein
YP_001635364.1	TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: rca:Rcas_4083 putative regulatory protein, FmdB family
YP_001635365.1	PFAM: Nucleotidyl transferase; KEGG: rca:Rcas_4084 nucleotidyl transferase
YP_001635366.1	KEGG: rrs:RoseRS_0882 hypothetical protein
YP_001635367.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_2289 glycosyl transferase group 1
YP_001635368.1	PFAM: LIM zinc-binding protein; KEGG: rrs:RoseRS_3343 LIM, zinc-binding protein
YP_001635369.1	PFAM: phospholipase/Carboxylesterase; KEGG: cyb:CYB_2836 phospholipase/carboxylesterase family protein
YP_001635370.1	PFAM: Peptidoglycan-binding LysM; KEGG: rrs:RoseRS_4013 peptidoglycan-binding LysM
YP_001635371.1	TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: rrs:RoseRS_1714 cell envelope-related transcriptional attenuator
YP_001635372.1	PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_4565 stage II sporulation E family protein
YP_001635373.1	PFAM: Aldehyde Dehydrogenase_; KEGG: rrs:RoseRS_0829 aldehyde dehydrogenase
YP_001635374.1	PFAM: extracellular solute-binding protein family 1; KEGG: hch:HCH_02206 spermidine/putrescine-binding periplasmic protein
YP_001635375.1	PFAM: extracellular solute-binding protein family 1; KEGG: hch:HCH_02206 spermidine/putrescine-binding periplasmic protein
YP_001635376.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: syf:Synpcc7942_1816 periplasmic sensor hybrid histidine kinase
YP_001635377.1	PFAM: response regulator receiver; KEGG: rrs:RoseRS_3877 response regulator receiver protein
YP_001635378.1	TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: cya:CYA_1749 carbamoyl-phosphate synthase, large subunit
YP_001635379.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2270 ABC transporter related
YP_001635380.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_3549 ABC transporter related
YP_001635381.1	PFAM: Forkhead-associated protein; peptidase C11 clostripain; KEGG: rrs:RoseRS_1520 FHA domain containing protein
YP_001635382.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dsy:DSY0353 hypothetical protein
YP_001635383.1	KEGG: rrs:RoseRS_3853 hypothetical protein
YP_001635384.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rca:Rcas_0566 NADH dehydrogenase (quinone)
YP_001635385.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xac:XAC2171 transcriptional regulator LysR family
YP_001635386.1	PFAM: small multidrug resistance protein; KEGG: sfr:Sfri_0072 small multidrug resistance protein
YP_001635387.1	KEGG: gfo:GFO_0545 hypothetical protein
YP_001635388.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rca:Rcas_2715 anti-sigma-factor antagonist
YP_001635389.1	TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: ava:Ava_3583 galactoside symporter
YP_001635390.1	PFAM: protein of unknown function DUF897; KEGG: rrs:RoseRS_1985 protein of unknown function DUF897
YP_001635391.1	KEGG: rrs:RoseRS_3849 nitrogen regulatory protein P-II
YP_001635392.1	PFAM: protein of unknown function UPF0052 and CofD; KEGG: rrs:RoseRS_2645 protein of unknown function UPF0052 and CofD
YP_001635393.1	KEGG: btk:BT9727_4521 hypothetical protein
YP_001635394.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_1259 glycosyl transferase group 1
YP_001635395.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pmf:P9303_28481 hypothetical protein
YP_001635396.1	PFAM: molybdopterin binding domain; KEGG: rrs:RoseRS_0826 molybdopterin binding domain
YP_001635398.1	PFAM: Anticodon-binding domain protein; YbaK/prolyl-tRNA synthetase associated region; KEGG: rrs:RoseRS_2277 proline--tRNA ligase
YP_001635399.1	PFAM: protein of unknown function DUF72; KEGG: rrs:RoseRS_3084 protein of unknown function DUF72
YP_001635400.1	TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: rrs:RoseRS_1548 putative delta-1-pyrroline-5-carboxylate dehydrogenase
YP_001635401.1	TIGRFAM: alanine racemase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; alanine racemase domain protein; Mur ligase middle domain protein; KEGG: rca:Rcas_1898 alanine racemase
YP_001635402.1	KEGG: rrs:RoseRS_3507 protein of unknown function DUF6, transmembrane
YP_001635403.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: rrs:RoseRS_2982 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein
YP_001635404.1	PFAM: response regulator receiver; ANTAR domain protein; KEGG: rca:Rcas_3658 response regulator receiver and ANTAR domain protein
YP_001635405.1	PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: hal:VNG0009G GraD2
YP_001635406.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: afw:Anae109_4166 ABC transporter related
YP_001635407.1	PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4579 glycosyl transferase, group 1
YP_001635408.1	TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rrs:RoseRS_3113 cysteine desulfurase family protein
YP_001635409.1	PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: rca:Rcas_3957 peptidase S41
YP_001635410.1	PFAM: penicillin-binding protein transpeptidase; KEGG: rca:Rcas_3956 peptidoglycan glycosyltransferase
YP_001635411.1	PFAM: ATP-binding region ATPase domain protein; KEGG: rca:Rcas_3955 putative signal transduction histidine kinase
YP_001635412.1	KEGG: rrs:RoseRS_0700 hypothetical protein
YP_001635413.1	PFAM: regulatory protein MarR; KEGG: bra:BRADO2326 putative transcriptional regulatory protein, MarR family
YP_001635414.1	PFAM: glycosyl transferase family 2; KEGG: dvu:DVU0134 glycosyl transferase, group 2 family protein
YP_001635415.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rrs:RoseRS_4457 protein of unknown function DUF224, cysteine-rich region domain protein
YP_001635416.1	PFAM: N-6 DNA methylase; KEGG: mhu:Mhun_2789 N-6 DNA methylase
YP_001635417.1	PFAM: protein of unknown function DUF955; KEGG: vei:Veis_3552 protein of unknown function DUF955
YP_001635418.1	KEGG: vei:Veis_3551 hypothetical protein
YP_001635419.1	PFAM: restriction modification system DNA specificity domain; KEGG: bte:BTH_I2742 type I restriction-modification system specificity determinant
YP_001635420.1	KEGG: psp:PSPPH_0610 hypothetical protein
YP_001635422.1	KEGG: rrs:RoseRS_0281 type I site-specific deoxyribonuclease, HsdR family; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases
YP_001635423.1	PFAM: CBS domain containing protein; amino acid-binding ACT domain protein; KEGG: rrs:RoseRS_3404 putative signal transduction protein with CBS domains
YP_001635424.1	PFAM: protein of unknown function DUF820; KEGG: rca:Rcas_2294 protein of unknown function DUF820
YP_001635425.1	PFAM: Lycopene beta and epsilon cyclase; KEGG: fjo:Fjoh_0926 lycopene beta and epsilon cyclase
YP_001635426.1	PFAM: OsmC family protein; KEGG: neu:NE1136 putative redox protein
YP_001635427.1	PFAM: YceI family protein; KEGG: rrs:RoseRS_4326 YceI family protein
YP_001635428.1	TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: mav:MAV_4144 hypothetical protein
YP_001635429.1	PFAM: DSBA oxidoreductase; KEGG: rrs:RoseRS_1292 DsbA oxidoreductase
YP_001635430.1	KEGG: rrs:RoseRS_1294 hypothetical protein
YP_001635432.1	PFAM: ABC-1 domain protein; KEGG: rrs:RoseRS_4587 ABC-1 domain protein
YP_001635433.1	TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: rrs:RoseRS_4614 transketolase
YP_001635435.1	KEGG: rrs:RoseRS_3681 hypothetical protein
YP_001635436.1	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase
YP_001635437.1	KEGG: rrs:RoseRS_4481 hypothetical protein
YP_001635438.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rca:Rcas_0833 multi-sensor signal transduction histidine kinase
YP_001635439.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_4483 two component transcriptional regulator, winged helix family
YP_001635440.1	PFAM: UvrD/REP helicase; KEGG: rca:Rcas_3376 UvrD/REP helicase
YP_001635441.1	SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_2600 protein kinase
YP_001635442.1	KEGG: rrs:RoseRS_3039 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41
YP_001635443.1	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
YP_001635444.1	PFAM: mannose-6-phosphate isomerase type I; KEGG: rrs:RoseRS_3802 mannose-6-phosphate isomerase
YP_001635445.1	TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: methyltransferase small; ribosomal L11 methyltransferase; Methyltransferase type 11; KEGG: rca:Rcas_2137 ribosomal protein L11 methyltransferase
YP_001635446.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
YP_001635447.1	TIGRFAM: serine O-acetyltransferase; KEGG: rrs:RoseRS_3035 serine O-acetyltransferase
YP_001635448.1	TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: rrs:RoseRS_3034 putative regulatory protein, FmdB family
YP_001635449.1	PFAM: Cold-shock protein DNA-binding; protein of unknown function DUF1294; SMART: Cold shock protein; KEGG: neu:NE0717 cold-shock DNA-binding domain
YP_001635450.1	KEGG: rrs:RoseRS_0214 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase
YP_001635451.1	KEGG: rrs:RoseRS_1875 amidophosphoribosyltransferase-like protein
YP_001635452.1	KEGG: ppf:Pput_3021 hypothetical protein
YP_001635453.1	KEGG: rca:Rcas_2050 hypothetical protein
YP_001635454.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: pth:PTH_1728 cytosine deaminase and related metal-dependent hydrolases
YP_001635455.1	PFAM: restriction endonuclease; KEGG: sfu:Sfum_2534 restriction endonuclease
YP_001635457.1	SMART: helix-turn-helix domain protein; KEGG: rrs:RoseRS_0529 helix-turn-helix domain protein
YP_001635458.1	PFAM: protein of unknown function DUF520; KEGG: rca:Rcas_1283 protein of unknown function DUF520
YP_001635459.1	KEGG: rca:Rcas_1284 MiaB-like tRNA modifying enzyme YliG; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB
YP_001635460.1	PFAM: Penicillinase repressor; KEGG: rrs:RoseRS_0532 transcriptional repressor, CopY family
YP_001635461.1	PFAM: Polyprenyl synthetase; KEGG: rrs:RoseRS_0533 polyprenyl synthetase
YP_001635462.1	PFAM: RNP-1 like RNA-binding protein; KEGG: ath:AT4G13850 ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2)
YP_001635463.1	TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: rrs:RoseRS_1116 Na+/Ca+ antiporter, CaCA family
YP_001635464.1	PFAM: histone deacetylase superfamily; KEGG: rca:Rcas_3448 histone deacetylase superfamily
YP_001635465.1	KEGG: dra:DR_A0258 hypothetical protein
YP_001635466.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_1760 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001635467.1	KEGG: syn:sll0688 hypothetical protein
YP_001635468.1	PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; response regulator receiver; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: rrs:RoseRS_2694 putative PAS/PAC sensor protein
YP_001635469.1	KEGG: rca:Rcas_2670 hypothetical protein
YP_001635470.1	PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: rca:Rcas_2671 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
YP_001635471.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rca:Rcas_0210 ATPase associated with various cellular activities AAA_3
YP_001635473.1	KEGG: rca:Rcas_3349 hypothetical protein
YP_001635474.1	KEGG: rca:Rcas_4247 hypothetical protein
YP_001635475.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_4552 short-chain dehydrogenase/reductase SDR
YP_001635476.1	TIGRFAM: molybdopterin converting factor, subunit 1; MoaD family protein; PFAM: thiamineS protein; KEGG: rrs:RoseRS_3195 molybdopterin converting factor, subunit 1
YP_001635477.1	PFAM: molybdopterin biosynthesis MoaE protein; KEGG: rrs:RoseRS_3195 molybdopterin converting factor, subunit 1
YP_001635478.1	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases
YP_001635479.1	PFAM: response regulator receiver; histidine kinase A domain protein; KEGG: gur:Gura_0925 two component, sigma-54 specific, transcriptional regulator, fis family
YP_001635480.1	PFAM: SMC domain protein; KEGG: rca:Rcas_4237 hypothetical protein
YP_001635481.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: rca:Rcas_4166 metal dependent phosphohydrolase
YP_001635482.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: nca:Noca_3292 Cys/Met metabolism pyridoxal-phosphate-dependent enzymes
YP_001635483.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_2957 glycosyl transferase group 1
YP_001635484.1	PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tfu:Tfu_2451 putative succinate dehydrogenase iron-sulfur protein
YP_001635485.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol
YP_001635486.1	TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: rrs:RoseRS_2400 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family
YP_001635487.1	SMART: AAA ATPase; KEGG: rca:Rcas_2742 AAA ATPase
YP_001635488.1	KEGG: rca:Rcas_2146 hypothetical protein
YP_001635489.1	KEGG: rrs:RoseRS_3029 hypothetical protein
YP_001635490.1	PFAM: peptidase M23B; KEGG: rrs:RoseRS_3030 peptidase M23B
YP_001635491.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rca:Rcas_1625 TPR repeat-containing protein
YP_001635492.1	activates fatty acids by binding to coenzyme A
YP_001635493.1	PFAM: beta-lactamase domain protein; KEGG: cth:Cthe_2754 beta-lactamase-like protein
YP_001635494.1	PFAM: phosphoribosyltransferase; KEGG: rca:Rcas_2433 uracil phosphoribosyltransferase
YP_001635495.1	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis
YP_001635496.1	KEGG: rca:Rcas_2435 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; Amidohydrolase 3
YP_001635497.1	KEGG: rrs:RoseRS_3501 hypothetical protein
YP_001635498.1	PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: rrs:RoseRS_1549 carboxypeptidase Taq
YP_001635499.1	PFAM: aminotransferase class I and II; KEGG: rca:Rcas_1209 aminotransferase class I and II
YP_001635500.1	KEGG: rca:Rcas_1329 hypothetical protein
YP_001635501.1	PFAM: glycoside hydrolase family 31; KEGG: cyb:CYB_1375 glycosyl hydrolase, family 31
YP_001635502.1	KEGG: gur:Gura_2085 hypothetical protein
YP_001635503.1	PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_2935 DNA polymerase, beta domain protein region
YP_001635504.1	SMART: AAA ATPase; KEGG: rca:Rcas_1107 AAA ATPase
YP_001635505.1	TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: rrs:RoseRS_1948 penicillin-binding protein, 1A family
YP_001635506.1	KEGG: rrs:RoseRS_4316 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase
YP_001635507.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: rrs:RoseRS_4317 amidohydrolase
YP_001635508.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: rrs:RoseRS_2243 MATE efflux family protein
YP_001635509.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
YP_001635510.1	PFAM: protein of unknown function DUF159; KEGG: ana:all3194 hypothetical protein
YP_001635511.1	KEGG: rrs:RoseRS_1192 hypothetical protein
YP_001635513.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; KEGG: gvi:glr3087 hypothetical protein
YP_001635514.1	KEGG: rca:Rcas_1704 hypothetical protein
YP_001635515.1	PFAM: aminotransferase class I and II; KEGG: rca:Rcas_3728 aminotransferase class I and II
YP_001635516.1	KEGG: rca:Rcas_3729 hypothetical protein
YP_001635517.1	KEGG: rrs:RoseRS_0475 hypothetical protein
YP_001635520.1	KEGG: rca:Rcas_0864 hypothetical protein
YP_001635521.1	PFAM: regulatory protein LuxR; Kelch repeat-containing protein; Kelch repeat protein; KEGG: rrs:RoseRS_0474 response regulator receiver protein
YP_001635522.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_3940 glycosyl transferase group 1
YP_001635523.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_3942 glycosyl transferase group 1
YP_001635524.1	KEGG: rca:Rcas_3943 hypothetical protein
YP_001635525.1	KEGG: rca:Rcas_3331 hypothetical protein
YP_001635526.1	PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: rrs:RoseRS_1971 homoserine dehydrogenase
YP_001635527.1	PFAM: regulatory protein LuxR; KEGG: rca:Rcas_4327 ATP-dependent transcriptional regulator, MalT-like, LuxR family
YP_001635528.1	KEGG: tte:TTE0290 Periplasmic sugar-binding proteins
YP_001635529.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fno:Fnod_1667 ABC transporter related
YP_001635530.1	PFAM: inner-membrane translocator; KEGG: tte:TTE0292 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components
YP_001635531.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pmy:Pmen_0083 two component transcriptional regulator, LuxR family
YP_001635532.1	PFAM: ABC transporter related; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: AAA ATPase; KEGG: rsh:Rsph17029_3423 ABC transporter related
YP_001635533.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; KEGG: cyb:CYB_1696 ATP-dependent helicase, DEAD/DEAH box family
YP_001635534.1	TIGRFAM: DNA polymerase III, delta prime subunit; SMART: AAA ATPase; KEGG: rrs:RoseRS_3588 DNA polymerase III, delta prime subunit
YP_001635535.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: rca:Rcas_4277 beta-ketoacyl synthase
YP_001635536.1	TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: rca:Rcas_0200 histidinol-phosphate aminotransferase
YP_001635537.1	PFAM: inositol monophosphatase; KEGG: rca:Rcas_0945 histidinol-phosphate phosphatase, putative
YP_001635538.1	PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: lmf:LMOf2365_2181 hypothetical protein
YP_001635539.1	catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis
YP_001635540.1	KEGG: tfu:Tfu_1996 putative integral membrane protein
YP_001635541.1	PFAM: transposase IS4 family protein; KEGG: asa:ASA_0455 transposase B
YP_001635542.1	KEGG: rso:RSp0990 TIS1421-transposase protein A
YP_001635543.1	KEGG: rca:Rcas_2143 hypothetical protein
YP_001635544.1	TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: rrs:RoseRS_0842 acetylornithine and succinylornithine aminotransferase
YP_001635545.1	PFAM: adenylosuccinate synthetase; KEGG: rrs:RoseRS_4214 adenylosuccinate synthase
YP_001635546.1	KEGG: mgm:Mmc1_2445 nucleotidyl transferase
YP_001635547.1	PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: rca:Rcas_3416 peptidase A24A domain protein
YP_001635548.1	TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: rrs:RoseRS_1564 shikimate 5-dehydrogenase
YP_001635549.1	PFAM: aminodeoxychorismate lyase; KEGG: rrs:RoseRS_1563 aminodeoxychorismate lyase
YP_001635550.1	KEGG: rca:Rcas_2610 tetratricopeptide TPR_2 repeat protein
YP_001635551.1	KEGG: olu:OSTLU_37018 predicted protein; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit
YP_001635552.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_1936 anti-sigma-factor antagonist
YP_001635553.1	PFAM: (Uracil-5)-methyltransferase; KEGG: rca:Rcas_3339 (uracil-5)-methyltransferase
YP_001635554.1	PFAM: blue (type 1) copper domain protein; KEGG: rrs:RoseRS_2366 blue (type 1) copper domain protein
YP_001635555.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: azo:azo0573 hypothetical protein
YP_001635556.1	KEGG: maq:Maqu_3442 response regulator receiver modulated diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; Hpt domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein
YP_001635557.1	KEGG: rca:Rcas_1115 hypothetical protein
YP_001635558.1	PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_3768 cellulose synthase (UDP-forming)
YP_001635559.1	TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_3767 anti-sigma-factor antagonist
YP_001635560.1	KEGG: rrs:RoseRS_3766 putative anti-sigma regulatory factor, serine/threonine protein kinase
YP_001635561.1	PFAM: Peptidoglycan-binding LysM; KEGG: rca:Rcas_1069 peptidoglycan-binding LysM
YP_001635562.1	KEGG: rca:Rcas_3794 hypothetical protein
YP_001635563.1	KEGG: rca:Rcas_3794 hypothetical protein
YP_001635564.1	PFAM: glycosyl transferase family 9; KEGG: esa:ESA_04106 hypothetical protein
YP_001635565.1	KEGG: rrs:RoseRS_1507 hypothetical protein
YP_001635566.1	PFAM: Methyltransferase type 11; KEGG: olu:OSTLU_27591 predicted protein
YP_001635567.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rca:Rcas_2075 alcohol dehydrogenase zinc-binding domain protein
YP_001635568.1	KEGG: rrs:RoseRS_3079 aspartate kinase; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein
YP_001635569.1	PFAM: Appr-1-p processing domain protein; KEGG: rca:Rcas_0073 hypothetical protein
YP_001635570.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive
YP_001635571.1	PFAM: dihydrodipicolinate synthetase; KEGG: rrs:RoseRS_3604 dihydrodipicolinate synthetase
YP_001635572.1	TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; KEGG: rrs:RoseRS_4128 glucose-1-phosphate thymidyltransferase
YP_001635573.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mta:Moth_0046 protein of unknown function UPF0011
YP_001635574.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rca:Rcas_0917 NAD-dependent epimerase/dehydratase
YP_001635575.1	PFAM: CBS domain containing protein; Rubredoxin-type Fe(Cys)4 protein; KEGG: ace:Acel_0591 putative signal-transduction protein with CBS domains
YP_001635576.1	KEGG: tfu:Tfu_3049 pyruvate dehydrogenase (lipoamide); TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component
YP_001635577.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: ace:Acel_0589 transketolase, central region
YP_001635578.1	PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: rca:Rcas_2011 dihydrolipoyllysine-residue succinyltransferase
YP_001635579.1	PFAM: Rhodanese domain protein; KEGG: rxy:Rxyl_2802 thiosulfate sulfurtransferase
YP_001635580.1	KEGG: rca:Rcas_2099 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_001635581.1	KEGG: rca:Rcas_2098 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_001635582.1	KEGG: rca:Rcas_2097 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_001635583.1	KEGG: rrs:RoseRS_2997 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I)
YP_001635584.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: rrs:RoseRS_2996 NADH-ubiquinone oxidoreductase, chain 4L
YP_001635585.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: rca:Rcas_2094 NADH-ubiquinone/plastoquinone oxidoreductase chain 6
YP_001635586.1	PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: rca:Rcas_2093 NADH dehydrogenase (quinone)
YP_001635587.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rrs:RoseRS_2993 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_001635588.1	KEGG: rrs:RoseRS_2992 NADH dehydrogenase (quinone); TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa
YP_001635589.1	TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: rca:Rcas_2090 NADH dehydrogenase (ubiquinone) 30 kDa subunit
YP_001635590.1	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen
YP_001635591.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: rca:Rcas_2088 NADH-ubiquinone/plastoquinone oxidoreductase chain 3
YP_001635592.1	PFAM: Forkhead-associated protein; KEGG: rca:Rcas_2060 FHA domain containing protein
YP_001635593.1	PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_1781 FHA domain containing protein
YP_001635594.1	PFAM: peptidase M22 glycoprotease; KEGG: rrs:RoseRS_4358 peptidase M22, glycoprotease
YP_001635595.1	PFAM: protein of unknown function UPF0079; KEGG: rca:Rcas_0713 protein of unknown function UPF0079
YP_001635596.1	KEGG: rrs:RoseRS_4001 hypothetical protein
YP_001635597.1	PFAM: periplasmic solute binding protein; KEGG: pla:Plav_2227 periplasmic solute binding protein
YP_001635598.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcl:ABC3960 Mn2+/Zn2+ ABC transporter ATP-binding protein
YP_001635599.1	PFAM: ABC-3 protein; KEGG: rca:Rcas_1589 ABC-3 protein
YP_001635600.1	KEGG: rrs:RoseRS_2630 hypothetical protein
YP_001635601.1	PFAM: response regulator receiver; ANTAR domain protein; KEGG: rca:Rcas_3658 response regulator receiver and ANTAR domain protein
YP_001635602.1	KEGG: rca:Rcas_3657 hypothetical protein
YP_001635603.1	in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ
YP_001635604.1	PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: rrs:RoseRS_1504 ferric reductase domain protein transmembrane component, N-terminal domain
YP_001635605.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rca:Rcas_4344 two component transcriptional regulator, winged helix family
YP_001635606.1	PFAM: Ketopantoate reductase ApbA/PanE domain protein; KEGG: bam:Bamb_2587 2-dehydropantoate 2-reductase
YP_001635607.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rrs:RoseRS_3555 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_001635608.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_2635 anti-sigma-factor antagonist
YP_001635609.1	PFAM: formyl transferase domain protein; KEGG: cya:CYA_1691 methionyl-tRNA formyltransferase
YP_001635610.1	PFAM: Fe(II) trafficking protein YggX; KEGG: rca:Rcas_3771 Fe(II) trafficking protein YggX
YP_001635611.1	PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; KEGG: ade:Adeh_2440 biotin carboxylase-like
YP_001635612.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sus:Acid_6427 radical SAM domain protein
YP_001635613.1	PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: rrs:RoseRS_3273 transglutaminase, N-terminal domain protein
YP_001635614.1	PFAM: protein of unknown function DUF403; KEGG: rrs:RoseRS_3275 protein of unknown function DUF403
YP_001635615.1	PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rca:Rcas_3761 protein of unknown function DUF404
YP_001635616.1	PFAM: fatty acid desaturase; KEGG: fra:Francci3_3960 stearoyl-CoA 9-desaturase
YP_001635617.1	KEGG: rca:Rcas_4069 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41
YP_001635618.1	PFAM: peptidase M18 aminopeptidase I; peptidase M42 family protein; KEGG: bha:BH3132 endo-1,4-beta-glucanase
YP_001635619.1	PFAM: Polynucleotide adenylyltransferase region; KEGG: rca:Rcas_2466 polynucleotide adenylyltransferase region
YP_001635620.1	KEGG: cme:CMH001C similar to hedgehog protein Pfam: Kelch_2 Kelch_1 Hint PROSITE: INTEIN_N_TER PRO_RICH THR_RICH
YP_001635621.1	PFAM: Abortive infection protein; KEGG: mem:Memar_0536 abortive infection protein
YP_001635622.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ava:Ava_3752 HAD-superfamily hydrolase subfamily IA, variant 3
YP_001635623.1	PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: ana:all4989 hypothetical protein
YP_001635624.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gtn:GTNG_0826 sugar transport system permease
YP_001635625.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ava:Ava_0461 binding-protein-dependent transport systems inner membrane component
YP_001635626.1	PFAM: extracellular solute-binding protein family 1; KEGG: tte:TTE0799 Sugar-binding periplasmic proteins/domains
YP_001635627.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sen:SACE_4591 transcriptional regulator, LacI family
YP_001635628.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
YP_001635629.1	PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: asu:Asuc_0819 protein of unknown function DUF262
YP_001635630.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_1310 HAD-superfamily hydrolase, subfamily IIA
YP_001635631.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: deb:DehaBAV1_0190 filamentation induced by cAMP protein Fic
YP_001635633.1	PFAM: metallophosphoesterase; KEGG: rca:Rcas_0288 metallophosphoesterase
YP_001635634.1	KEGG: rrs:RoseRS_3154 excinuclease ABC, C subunit; TIGRFAM: excinuclease ABC, C subunit; PFAM: Excinuclease ABC C subunit domain protein; helix-hairpin-helix motif; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; SMART: Helix-hairpin-helix DNA-binding class 1
YP_001635635.1	PFAM: carboxyl transferase; KEGG: rca:Rcas_0975 propionyl-CoA carboxylase
YP_001635636.1	PFAM: protein of unknown function DUF58; KEGG: rrs:RoseRS_0586 protein of unknown function DUF58
YP_001635637.1	PFAM: Indigoidine synthase A family protein; KEGG: rca:Rcas_3582 indigoidine synthase A family protein
YP_001635638.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: rca:Rcas_2972 RNA polymerase, sigma 70 subunit, RpoD family
YP_001635639.1	TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; KEGG: rrs:RoseRS_0321 hypoxanthine phosphoribosyltransferase
YP_001635640.1	KEGG: rca:Rcas_0865 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_001635641.1	KEGG: rca:Rcas_0717 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001635642.1	PFAM: ABC-2 type transporter; KEGG: rca:Rcas_3060 hypothetical protein
YP_001635643.1	KEGG: rrs:RoseRS_4344 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein
YP_001635644.1	catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis
YP_001635645.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_4343 AMP-dependent synthetase and ligase
YP_001635646.1	KEGG: sth:STH3166 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase
YP_001635647.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
YP_001635648.1	KEGG: rrs:RoseRS_0949 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein
YP_001635649.1	PFAM: alpha/beta hydrolase fold; KEGG: mxa:MXAN_4583 hydrolase, alpha/beta fold family
YP_001635650.1	KEGG: nmu:Nmul_A2304 ATP-dependent DNA helicase, RecQ family; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases
YP_001635651.1	KEGG: rrs:RoseRS_3167 hypothetical protein
YP_001635652.1	KEGG: rrs:RoseRS_2563 hypothetical protein
YP_001635653.1	KEGG: rrs:RoseRS_1286 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_001635654.1	PFAM: ribosomal protein S16; KEGG: rca:Rcas_1666 ribosomal protein S16
YP_001635655.1	KEGG: rrs:RoseRS_1288 RNA-binding protein (contains KH domain)-like protein
YP_001635656.1	TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: rrs:RoseRS_1289 16S rRNA processing protein RimM
YP_001635657.1	KEGG: rca:Rcas_2148 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein
YP_001635658.1	TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: rrs:RoseRS_0207 phosphoribosyl-AMP cyclohydrolase
YP_001635659.1	involved in de novo purine biosynthesis
YP_001635660.1	KEGG: rrs:RoseRS_0201 hypothetical protein
YP_001635661.1	KEGG: rca:Rcas_4339 hypothetical protein
YP_001635662.1	PFAM: Roadblock/LC7 family protein; KEGG: rca:Rcas_4340 roadblock/LC7 family protein
YP_001635663.1	PFAM: Roadblock/LC7 family protein; KEGG: mbn:Mboo_1908 roadblock/LC7 family protein
YP_001635664.1	KEGG: rca:Rcas_4341 hypothetical protein
YP_001635665.1	KEGG: rrs:RoseRS_0196 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001635666.1	TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF58; KEGG: sth:STH1769 hypothetical protein
YP_001635667.1	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; FAD dependent oxidoreductase; KEGG: rca:Rcas_0680 thioredoxin reductase
YP_001635669.1	PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_3764 haloacid dehalogenase domain protein hydrolase
YP_001635670.1	PFAM: response regulator receiver; KEGG: reh:H16_B2354 signal transduction histidine kinase containing two receiver domains (hybrid)
YP_001635671.1	PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: rrs:RoseRS_4385 Glu/Leu/Phe/Val dehydrogenase, C terminal
YP_001635672.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_4384 GCN5-related N-acetyltransferase
YP_001635673.1	TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: rrs:RoseRS_3458 RNA methyltransferase, TrmH family, group 3
YP_001635674.1	TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: rrs:RoseRS_3459 chaperone protein DnaJ
YP_001635675.1	KEGG: rrs:RoseRS_3460 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70
YP_001635676.1	PFAM: GrpE protein; KEGG: rca:Rcas_4391 GrpE protein
YP_001635677.1	TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; KEGG: rrs:RoseRS_3462 heat-inducible transcription repressor HrcA
YP_001635678.1	KEGG: gvi:gll4248 hypothetical protein
YP_001635679.1	KEGG: gvi:gll4200 similar to cell surface glycoprotein (s-layer protein) related protein
YP_001635681.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: rca:Rcas_4052 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein
YP_001635682.1	PFAM: dihydroorotate dehydrogenase; KEGG: rrs:RoseRS_1785 dihydroorotate dehydrogenase
YP_001635683.1	PFAM: regulatory protein TetR; KEGG: rca:Rcas_2192 transcriptional regulator, TetR family
YP_001635684.1	KEGG: rca:Rcas_2191 Na+/melibiose symporter and related transporter-like protein
YP_001635685.1	PFAM: aminotransferase class V; Pyridoxal-dependent decarboxylase; KEGG: rca:Rcas_2190 pyridoxal-dependent decarboxylase
YP_001635686.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KR domain protein; KEGG: rrs:RoseRS_1073 thiamine pyrophosphate enzyme, central region
YP_001635687.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rca:Rcas_2187 peptidase M20
YP_001635688.1	TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; KEGG: rca:Rcas_3751 geranylgeranyl reductase
YP_001635689.1	TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: rca:Rcas_3752 bacteriochlorophyll/chlorophyll synthetase
YP_001635690.1	KEGG: rca:Rcas_3753 hypothetical protein
YP_001635692.1	PFAM: antenna complex alpha/beta subunit; KEGG: rrs:RoseRS_3270 antenna complex, alpha/beta subunit
YP_001635693.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_1251 cyclic nucleotide-binding protein
YP_001635694.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0494 ABC transporter related
YP_001635695.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_1307 response regulator receiver sensor signal transduction histidine kinase
YP_001635696.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Cache domain protein; KEGG: rrs:RoseRS_1308 multi-sensor signal transduction histidine kinase
YP_001635697.1	PFAM: N-acetylmuramoyl-L-alanine amidase family 2; PA14 domain protein; SMART: Animal peptidoglycan recognition protein PGRP; KEGG: rrs:RoseRS_1610 N-acetylmuramoyl-L-alanine amidase, family 2
YP_001635698.1	PFAM: transposase IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4
YP_001635699.1	KEGG: rrs:RoseRS_3558 protein of unknown function DUF86
YP_001635700.1	PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_2453 DNA polymerase, beta domain protein region
YP_001635701.1	KEGG: rca:Rcas_3961 protein of unknown function DUF86
YP_001635702.1	PFAM: DNA polymerase beta domain protein region; KEGG: rca:Rcas_3960 DNA polymerase beta domain protein region
YP_001635703.1	KEGG: rrs:RoseRS_3448 hypothetical protein
YP_001635704.1	PFAM: 3-dehydroquinate synthase; KEGG: rrs:RoseRS_4545 3-dehydroquinate synthase
YP_001635705.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: rca:Rcas_0681 molybdenum cofactor synthesis domain
YP_001635706.1	PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rrs:RoseRS_2447 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding
YP_001635707.1	PFAM: ABC-2 type transporter; KEGG: sus:Acid_4640 ABC-2 type transporter
YP_001635708.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gur:Gura_2358 ABC transporter related
YP_001635709.1	PFAM: VanZ family protein; KEGG: ava:Ava_4646 hypothetical protein
YP_001635710.1	KEGG: bra:BRADO1084 putative glucose dehydrogenase precursor
YP_001635711.1	TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: dsy:DSY3346 hypothetical protein
YP_001635712.1	PFAM: glycosyl transferase family 2; KEGG: kra:Krad_3678 glycosyl transferase family 2
YP_001635713.1	PFAM: polysaccharide deacetylase; KEGG: bha:BH1917 chitooligosaccharide deacetylase
YP_001635714.1	in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from Escherichia coli involved in cysteine biosynthesis
YP_001635715.1	PFAM: sulfotransferase; KEGG: sfu:Sfum_0779 sulfotransferase
YP_001635716.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: sde:Sde_2350 response regulator receiver domain protein (CheY-like)
YP_001635717.1	PFAM: glycosyl transferase family 2; KEGG: kra:Krad_3285 glycosyl transferase family 2
YP_001635718.1	PFAM: glycosyl transferase group 1; KEGG: gsu:GSU3023 glycosyl transferase, group 1/2 family protein
YP_001635719.1	KEGG: rca:Rcas_1353 non-specific protein-tyrosine kinase; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein
YP_001635720.1	PFAM: secretion protein HlyD family protein; KEGG: rrs:RoseRS_3638 secretion protein HlyD family protein
YP_001635721.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mgm:Mmc1_2166 NAD-dependent epimerase/dehydratase
YP_001635722.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: ade:Adeh_4286 NAD-dependent epimerase/dehydratase
YP_001635723.1	PFAM: glycosyl transferase family 2; KEGG: gme:Gmet_1493 glycosyl transferase, family 2
YP_001635725.1	KEGG: ter:Tery_2168 glycosyl transferase, group 1
YP_001635726.1	PFAM: glycosyl transferase family 2; KEGG: afw:Anae109_1238 glycosyl transferase family 2
YP_001635727.1	PFAM: glycosyl transferase group 1; KEGG: cvi:CV_4120 probable glycosyltransferase
YP_001635728.1	PFAM: YdjC family protein; KEGG: gtn:GTNG_1202 putative phospho-beta-glucosidase
YP_001635729.1	KEGG: vch:VC0924 CapK protein, putative
YP_001635730.1	PFAM: glycosyl transferase group 1; KEGG: rso:RS02343 probable glycosyltransferase protein
YP_001635731.1	KEGG: nha:Nham_0235 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; GAF domain protein
YP_001635732.1	PFAM: Methyltransferase type 11; Ribosomal small subunit Rsm22; KEGG: aba:Acid345_3030 hypothetical protein
YP_001635733.1	PFAM: FAD linked oxidase domain protein; KEGG: rca:Rcas_4146 D-lactate dehydrogenase (cytochrome)
YP_001635734.1	PFAM: FAD linked oxidase domain protein; KEGG: rrs:RoseRS_3362 FAD linked oxidase domain protein
YP_001635735.1	PFAM: FAD linked oxidase domain protein; KEGG: rrs:RoseRS_3360 D-lactate dehydrogenase (cytochrome)
YP_001635736.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rca:Rcas_4296 protein of unknown function DUF224 cysteine-rich region domain protein
YP_001635737.1	KEGG: rrs:RoseRS_4140 Fe-S-cluster-containing hydrogenase components 1-like protein
YP_001635738.1	KEGG: aba:Acid345_3000 hypothetical protein
YP_001635739.1	KEGG: rrs:RoseRS_4139 hypothetical protein
YP_001635740.1	KEGG: noc:Noc_1243 hypothetical protein
YP_001635741.1	KEGG: sus:Acid_0496 electron transport protein SCO1/SenC
YP_001635742.1	TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; cytochrome C oxidase subunit II transmembrane region; KEGG: aba:Acid345_2996 cytochrome c oxidase, subunit II
YP_001635743.1	KEGG: sus:Acid_0498 cytochrome-c oxidase; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I
YP_001635744.1	PFAM: cytochrome c oxidase subunit III; KEGG: sus:Acid_0499 cytochrome c oxidase, subunit III
YP_001635745.1	TIGRFAM: caa(3)-type oxidase, subunit IV; KEGG: sus:Acid_0500 caa(3)-type oxidase, subunit IV
YP_001635746.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_3281 HAD-superfamily hydrolase, subfamily IA, variant 3
YP_001635747.1	PFAM: GCN5-related N-acetyltransferase; KEGG: dge:Dgeo_0370 GCN5-related N-acetyltransferase
YP_001635748.1	PFAM: GCN5-related N-acetyltransferase; KEGG: dge:Dgeo_0370 GCN5-related N-acetyltransferase
YP_001635749.1	PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: msm:MSMEG_2097 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
YP_001635750.1	KEGG: ava:Ava_3780 protein tyrosine phosphatase
YP_001635751.1	TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: xac:XAC0157 hypothetical protein
YP_001635752.1	KEGG: rrs:RoseRS_1004 hypothetical protein
YP_001635754.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: gka:GK2895 hypothetical protein
YP_001635755.1	PFAM: Pathogenesis-related transcriptional factor and ERF protein; KEGG: dps:DP2593 hypothetical protein
YP_001635756.1	KEGG: chu:CHU_2450 hydrolase with alpha/beta fold
YP_001635757.1	PFAM: tail sheath protein; KEGG: bra:BRADO4390 putative phage tail sheath protein
YP_001635758.1	TIGRFAM: conserved hypothetical phage tail protein; PFAM: conserved hypothetical protein; KEGG: bra:BRADO4389 putative phage tail region protein
YP_001635759.1	KEGG: bra:BRADO4388 hypothetical protein
YP_001635760.1	KEGG: gga:396544 nascent polypeptide-associated complex alpha subunit
YP_001635761.1	KEGG: nha:Nham_0828 hypothetical protein
YP_001635762.1	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: rca:Rcas_2830 AAA ATPase central domain protein
YP_001635764.1	KEGG: dar:Daro_3601 hypothetical protein
YP_001635765.1	KEGG: rrs:RoseRS_1653 hypothetical protein
YP_001635766.1	KEGG: bra:BRADO4383 conserved hypothetical protein; putative signal peptide
YP_001635767.1	KEGG: bra:BRADO4382 hypothetical protein
YP_001635768.1	KEGG: bra:BRADO4381 hypothetical protein
YP_001635769.1	KEGG: bra:BRADO4380 hypothetical protein
YP_001635770.1	KEGG: aba:Acid345_0852 hypothetical protein
YP_001635771.1	PFAM: GPW/gp25 family protein; KEGG: bra:BRADO4378 hypothetical protein
YP_001635772.1	KEGG: bra:BRADO4377 hypothetical protein
YP_001635773.1	KEGG: bra:BRADO4376 hypothetical protein
YP_001635774.1	KEGG: bra:BRADO4375 hypothetical protein
YP_001635775.1	KEGG: bra:BRADO4374 hypothetical protein
YP_001635776.1	KEGG: sfu:Sfum_2053 hypothetical protein
YP_001635777.1	TIGRFAM: cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; KEGG: plt:Plut_1901 RfaE bifunctional protein, domain II
YP_001635779.1	PFAM: phosphoglucose isomerase (PGI); KEGG: drm:Dred_2902 glucose-6-phosphate isomerase
YP_001635780.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: bte:BTH_II0571 pectin degradation protein KdgF
YP_001635781.1	KEGG: rca:Rcas_4185 hypothetical protein
YP_001635782.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_001635783.1	TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: rca:Rcas_4322 preprotein translocase, SecE subunit
YP_001635784.1	TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: rca:Rcas_4321 NusG antitermination factor
YP_001635785.1	binds directly to 23S ribosomal RNA
YP_001635786.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
YP_001635787.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
YP_001635788.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
YP_001635791.1	KEGG: rrs:RoseRS_0585 hypothetical protein
YP_001635792.1	KEGG: rrs:RoseRS_3765 hypothetical protein
YP_001635793.1	TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rca:Rcas_0739 cytidine deaminase
YP_001635794.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rrs:RoseRS_4395 protein of unknown function DUF21
YP_001635795.1	KEGG: rca:Rcas_0737 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase
YP_001635796.1	ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence
YP_001635797.1	KEGG: mta:Moth_0915 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein
YP_001635798.1	TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; KEGG: rrs:RoseRS_0969 riboflavin synthase, alpha subunit
YP_001635799.1	KEGG: mta:Moth_0917 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II
YP_001635800.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
YP_001635801.1	PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; KEGG: rrs:RoseRS_2118 domain of unknown function DUF1731
YP_001635802.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rrs:RoseRS_3025 2-alkenal reductase
YP_001635803.1	PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_1295 NUDIX hydrolase
YP_001635804.1	PFAM: aminotransferase class-III; KEGG: rca:Rcas_1032 aminotransferase class-III
YP_001635805.1	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine
YP_001635806.1	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate
YP_001635807.1	PFAM: alpha/beta hydrolase fold; KEGG: pap:PSPA7_2212 probable lipase
YP_001635808.1	PFAM: Integral membrane protein TerC; KEGG: gvi:glr4409 putative transmembrane transport protein
YP_001635809.1	TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: rca:Rcas_3954 Na+/Ca+ antiporter, CaCA family
YP_001635810.1	PFAM: blue (type 1) copper domain protein; KEGG: sth:STH1505 hypothetical protein
YP_001635811.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: aeh:Mlg_2090 NADH dehydrogenase (quinone)
YP_001635812.1	PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: pvi:Cvib_1258 Na+/H+ antiporter MnhB subunit-related protein
YP_001635813.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: gsu:GSU2342 membrane protein, putative
YP_001635814.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rca:Rcas_1771 NADH dehydrogenase (quinone)
YP_001635815.1	PFAM: cation antiporter; KEGG: rrs:RoseRS_2098 cation antiporter
YP_001635816.1	PFAM: multiple resistance and pH regulation protein F; KEGG: dra:DR_0885 cation transport system protein, putative
YP_001635817.1	TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: maq:Maqu_2861 monovalent cation/proton antiporter, MnhG/PhaG subunit
YP_001635818.1	PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_4378 major facilitator superfamily MFS_1
YP_001635819.1	PFAM: regulatory protein TetR; KEGG: rrs:RoseRS_1940 transcriptional regulator, TetR family
YP_001635820.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_1939 major facilitator superfamily MFS_1
YP_001635821.1	KEGG: rrs:RoseRS_1938 hypothetical protein
YP_001635822.1	KEGG: rca:Rcas_1414 hypothetical protein
YP_001635823.1	PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rca:Rcas_1196 protein serine phosphatase with GAF(s) sensor(s)
YP_001635824.1	PFAM: O-methyltransferase family 3; KEGG: rrs:RoseRS_2619 O-methyltransferase, family 3
YP_001635825.1	PFAM: response regulator receiver; ANTAR domain protein; KEGG: rca:Rcas_3118 response regulator receiver and ANTAR domain protein
YP_001635826.1	TIGRFAM: chorismate mutase; PFAM: Chorismate mutase of the AroH class; KEGG: rrs:RoseRS_2360 chorismate mutase
YP_001635827.1	KEGG: rca:Rcas_3120 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA
YP_001635828.1	with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate
YP_001635829.1	PFAM: SNO glutamine amidotransferase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: rca:Rcas_3723 SNO glutamine amidotransferase
YP_001635830.1	KEGG: rca:Rcas_3722 hypothetical protein
YP_001635831.1	PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_3233 single-stranded nucleic acid binding R3H domain protein
YP_001635832.1	PFAM: thymidylate kinase; KEGG: rca:Rcas_3720 dTMP kinase
YP_001635833.1	PFAM: protein of unknown function DUF970; KEGG: rca:Rcas_3719 protein of unknown function DUF970
YP_001635834.1	KEGG: rca:Rcas_3718 hypothetical protein
YP_001635835.1	PFAM: peptidase S58 DmpA; KEGG: rca:Rcas_3716 peptidase S58 DmpA
YP_001635836.1	PFAM: extracellular solute-binding protein family 5; KEGG: rrs:RoseRS_0093 extracellular solute-binding protein, family 5
YP_001635837.1	PFAM: Mur ligase middle domain protein; domain of unknown function DUF1727; KEGG: rrs:RoseRS_0500 domain of unknown function DUF1727
YP_001635838.1	KEGG: rca:Rcas_0085 hypothetical protein
YP_001635839.1	KEGG: rca:Rcas_1154 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein
YP_001635840.1	KEGG: fjo:Fjoh_0804 hypothetical protein
YP_001635841.1	PFAM: LmbE family protein; KEGG: rrs:RoseRS_0663 LmbE family protein
YP_001635842.1	PFAM: metallophosphoesterase; KEGG: rca:Rcas_0221 metallophosphoesterase
YP_001635843.1	PFAM: SMC domain protein; KEGG: rrs:RoseRS_0905 SMC domain protein
YP_001635845.1	PFAM: Integral membrane protein TerC; KEGG: gme:Gmet_1782 integral membrane protein TerC
YP_001635846.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rrs:RoseRS_1974 transcriptional regulator, LysR family
YP_001635847.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_2925 amine oxidase
YP_001635848.1	KEGG: rca:Rcas_3734 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70
YP_001635849.1	PFAM: Tetratricopeptide TPR_4; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rpe:RPE_4376 ATPase-like protein
YP_001635851.1	PFAM: PilT protein domain protein; KEGG: ana:all0753 hypothetical protein
YP_001635852.1	KEGG: rrs:RoseRS_4296 hypothetical protein
YP_001635853.1	PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: ter:Tery_0647 adenylate/guanylate cyclase
YP_001635854.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_1489 glycosyl transferase group 1
YP_001635855.1	PFAM: protein of unknown function DUF970; KEGG: rca:Rcas_1490 protein of unknown function DUF970
YP_001635856.1	PFAM: phosphoribosyltransferase; KEGG: rrs:RoseRS_4117 phosphoribosyltransferase
YP_001635857.1	PFAM: TPR repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rca:Rcas_4424 transcriptional activator domain
YP_001635858.1	KEGG: rrs:RoseRS_0419 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_001635859.1	KEGG: rrs:RoseRS_0418 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_001635860.1	PFAM: isochorismatase hydrolase; KEGG: rca:Rcas_3491 N-carbamoylsarcosine amidase
YP_001635861.1	PFAM: Hydantoinase B/oxoprolinase; KEGG: rca:Rcas_3492 5-oxoprolinase (ATP-hydrolyzing)
YP_001635862.1	PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: rca:Rcas_3493 5-oxoprolinase (ATP-hydrolyzing)
YP_001635863.1	PFAM: pyruvate carboxyltransferase; KEGG: rca:Rcas_3494 pyruvate carboxyltransferase
YP_001635864.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rca:Rcas_3495 formyl-CoA transferase
YP_001635865.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rca:Rcas_3496 transcriptional regulator, GntR family
YP_001635866.1	PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_3682 glycosyl transferase, family 2
YP_001635867.1	KEGG: rca:Rcas_3297 hypothetical protein
YP_001635868.1	PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; KEGG: rca:Rcas_3296 transcriptional regulator, LuxR family
YP_001635869.1	KEGG: csc:Csac_0484 hypothetical protein
YP_001635870.1	KEGG: swo:Swol_2528 hypothetical protein
YP_001635871.1	KEGG: cth:Cthe_3210 protein of unknown function DUF324
YP_001635872.1	TIGRFAM: CRISPR-associated RAMP protein, Csx10 family; KEGG: csc:Csac_0486 protein of unknown function DUF324
YP_001635873.1	PFAM: protein of unknown function DUF324; KEGG: swo:Swol_2526 uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)-like protein
YP_001635875.1	PFAM: RNA binding S1 domain protein; KEGG: csc:Csac_0489 protein of unknown function DUF324
YP_001635876.1	SMART: helix-turn-helix domain protein; KEGG: cbe:Cbei_3660 helix-turn-helix domain protein
YP_001635877.1	KEGG: rrs:RoseRS_4310 hypothetical protein
YP_001635878.1	PFAM: beta-lactamase domain protein; Excalibur domain protein; KEGG: rrs:RoseRS_4309 beta-lactamase domain protein
YP_001635879.1	TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ana:all0879 alcohol dehydrogenase
YP_001635880.1	PFAM: carbohydrate kinase FGGY; KEGG: rca:Rcas_3453 carbohydrate kinase FGGY
YP_001635881.1	TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_2731 rhamnulose-1-phosphate aldolase/alcohol dehydrogenase
YP_001635882.1	catalyzes the formation of L-rhamnulose from L-rhamnose
YP_001635883.1	PFAM: protein of unknown function DUF718; KEGG: rca:Rcas_3456 protein of unknown function DUF718
YP_001635884.1	KEGG: ret:RHE_PE00289 probable sugar ABC transporter, substrate-binding protein
YP_001635885.1	PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_2727 monosaccharide-transporting ATPase
YP_001635886.1	PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_2726 monosaccharide-transporting ATPase
YP_001635887.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2725 ABC transporter related
YP_001635888.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: rrs:RoseRS_2724 transcriptional regulator, DeoR family
YP_001635889.1	KEGG: rrs:RoseRS_1438 hypothetical protein
YP_001635890.1	PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_1439 protein of unknown function DUF324
YP_001635891.1	TIGRFAM: CRISPR-associated RAMP protein, Csx10 family; KEGG: rrs:RoseRS_1440 CRISPR-associated RAMP protein, Csx10 family
YP_001635892.1	KEGG: rrs:RoseRS_1441 hypothetical protein
YP_001635893.1	TIGRFAM: CRISPR-associated RAMP protein, SSO1426 family; PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_1442 CRISPR-associated RAMP protein, SSO1426 family
YP_001635894.1	PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_1443 protein of unknown function DUF324
YP_001635895.1	KEGG: rrs:RoseRS_1444 hypothetical protein
YP_001635896.1	PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_1445 protein of unknown function DUF324
YP_001635899.1	KEGG: rrs:RoseRS_1446 hypothetical protein
YP_001635900.1	KEGG: pth:PTH_1930 hypothetical protein
YP_001635901.1	KEGG: rrs:RoseRS_2220 hypothetical protein
YP_001635902.1	KEGG: rrs:RoseRS_2219 hypothetical protein
YP_001635903.1	KEGG: rrs:RoseRS_2218 hypothetical protein
YP_001635904.1	KEGG: rrs:RoseRS_2217 nicotinate (nicotinamide) nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain protein; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase
YP_001635905.1	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA
YP_001635906.1	PFAM: PspA/IM30 family protein; KEGG: rca:Rcas_0896 phage shock protein A, PspA
YP_001635907.1	catalyzes the formation of thymidine 5'-phosphate from thymidine
YP_001635908.1	PFAM: conserved hypothetical protein; KEGG: rxy:Rxyl_2215 conserved hypothetical protein 730
YP_001635909.1	KEGG: rrs:RoseRS_4569 hypothetical protein
YP_001635910.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rca:Rcas_3431 dTDP-glucose 4,6-dehydratase
YP_001635911.1	KEGG: tel:tll0586 phosphoribosylaminoimidazole carboxylase catalytic chain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_001635912.1	KEGG: gvi:gll1252 phosphoribosylaminoimidazole carboxylase ATPase-subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
YP_001635913.1	PFAM: Helix-turn-helix type 11 domain protein; KEGG: rca:Rcas_2004 helix-turn-helix type 11 domain protein
YP_001635914.1	PFAM: ribosomal protein L31; KEGG: rca:Rcas_2003 ribosomal protein L31
YP_001635915.1	involved in the peptidyltransferase reaction during translation
YP_001635916.1	PFAM: ribosomal protein L21; KEGG: rca:Rcas_2001 ribosomal protein L21
YP_001635917.1	PFAM: response regulator receiver; Roadblock/LC7 family protein; KEGG: dvl:Dvul_2845 two component, sigma54 specific, transcriptional regulator, fis family
YP_001635918.1	TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); GAD domain protein; tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: rca:Rcas_3786 aspartyl-tRNA synthetase
YP_001635919.1	PFAM: Polyprenyl synthetase; KEGG: rca:Rcas_0392 polyprenyl synthetase
YP_001635920.1	PFAM: peptidase S45 penicillin amidase; KEGG: rrs:RoseRS_1297 peptidase S45, penicillin amidase
YP_001635923.1	PFAM: Polynucleotide adenylyltransferase region; KEGG: gvi:gll2924 tRNA nucleotidyltransferase (CCA-adding enzyme)
YP_001635924.1	PFAM: response regulator receiver; KEGG: rrs:RoseRS_4041 response regulator receiver protein
YP_001635925.1	PFAM: Auxin Efflux Carrier; KEGG: rrs:RoseRS_0121 auxin efflux carrier
YP_001635926.1	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rca:Rcas_0066 TRAP dicarboxylate transporter-DctP subunit
YP_001635927.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ava:Ava_0884 TRAP dicarboxylate transporter, DctM subunit
YP_001635928.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: ter:Tery_3030 tripartite ATP-independent periplasmic transporter, DctQ component
YP_001635929.1	catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP
YP_001635930.1	KEGG: rca:Rcas_0319 hypothetical protein
YP_001635931.1	PFAM: extracellular solute-binding protein family 5; KEGG: rca:Rcas_0320 extracellular solute-binding protein family 5
YP_001635932.1	KEGG: rca:Rcas_2436 hypothetical protein
YP_001635935.1	KEGG: rca:Rcas_0264 regulator of chromosome condensation RCC1
YP_001635936.1	PFAM: dihydroorotate dehydrogenase; KEGG: rrs:RoseRS_0764 dihydroorotate dehydrogenase family protein
YP_001635937.1	TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rrs:RoseRS_0794 UDP-N-acetylmuramyl-tripeptide synthetase
YP_001635938.1	PFAM: Methicillin resistance protein; KEGG: rrs:RoseRS_3975 methicillin resistance protein
YP_001635939.1	PFAM: LmbE family protein; KEGG: rrs:RoseRS_3974 LmbE family protein
YP_001635940.1	PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: rca:Rcas_1417 PBS lyase heat domain protein repeat-containing protein
YP_001635941.1	KEGG: rca:Rcas_1418 hypothetical protein
YP_001635942.1	KEGG: rrs:RoseRS_3971 hypothetical protein
YP_001635943.1	PFAM: ROK family protein; KEGG: rca:Rcas_0678 ROK family protein
YP_001635944.1	KEGG: rrs:RoseRS_0098 hypothetical protein
YP_001635945.1	PFAM: Endonuclease V; KEGG: rrs:RoseRS_2758 deoxyribonuclease V
YP_001635946.1	PFAM: oxidoreductase molybdopterin binding; KEGG: rrs:RoseRS_1086 oxidoreductase, molybdopterin binding
YP_001635947.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: gvi:gll3435 hypothetical protein
YP_001635948.1	PFAM: glycosyl transferase family 28; KEGG: rpe:RPE_2215 glycosyl transferase, family 28
YP_001635949.1	PFAM: WD-40 repeat protein; SMART: serine/threonine protein kinase; KEGG: rca:Rcas_3489 serine/threonine protein kinase with WD40 repeats
YP_001635950.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: syc:syc2113_c phytoene dehydrogenase, phytoene desaturase
YP_001635951.1	KEGG: rrs:RoseRS_2152 hypothetical protein
YP_001635952.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_2851 putative PAS/PAC sensor protein
YP_001635953.1	PFAM: aminotransferase class I and II; KEGG: drm:Dred_1696 aminotransferase, class I and II
YP_001635954.1	PFAM: PfkB domain protein; KEGG: tel:tlr1773 ADP-heptose synthase
YP_001635955.1	TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_3288 anti-sigma-factor antagonist
YP_001635956.1	PFAM: ATP-binding region ATPase domain protein; KEGG: rca:Rcas_4099 putative anti-sigma regulatory factor, serine/threonine protein kinase
YP_001635957.1	PFAM: ATP-binding region ATPase domain protein; KEGG: rca:Rcas_4100 putative anti-sigma regulatory factor, serine/threonine protein kinase
YP_001635958.1	PFAM: carboxyl transferase; KEGG: rrs:RoseRS_3291 carboxyl transferase
YP_001635959.1	KEGG: rrs:RoseRS_1978 glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF
YP_001635960.1	KEGG: rca:Rcas_2989 hypothetical protein
YP_001635961.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
YP_001635962.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
YP_001635963.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_001635964.1	KEGG: bbk:BARBAKC583_1373 putative SAM-dependent methyltransferase
YP_001635965.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_001635966.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
YP_001635967.1	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
YP_001635968.1	PFAM: ribosomal protein L4/L1e; KEGG: rrs:RoseRS_1184 ribosomal protein L4/L1e
YP_001635969.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
YP_001635970.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_001635971.1	TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; KEGG: rrs:RoseRS_1181 ribosomal protein S19
YP_001635972.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
YP_001635973.1	KEGG: rrs:RoseRS_1179 ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein
YP_001635974.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
YP_001635975.1	one of the stabilizing components for the large ribosomal subunit
YP_001635976.1	primary binding protein; helps mediate assembly; involved in translation fidelity
YP_001635977.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
YP_001635978.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_001635979.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
YP_001635980.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif
YP_001635981.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
YP_001635982.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
YP_001635983.1	binds 5S rRNA along with protein L5 and L25
YP_001635984.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
YP_001635985.1	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7
YP_001635986.1	late assembly protein
YP_001635987.1	TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: rrs:RoseRS_1165 preprotein translocase, SecY subunit
YP_001635988.1	PFAM: adenylate kinase; adenylate kinase lid domain protein; KEGG: rca:Rcas_4005 nucleoside-triphosphate--adenylate kinase
YP_001635989.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
YP_001635990.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif
YP_001635991.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
YP_001635992.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
YP_001635993.1	PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: rca:Rcas_4000 ribosomal protein S4
YP_001635994.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_001635995.1	is a component of the macrolide binding site in the peptidyl transferase center
YP_001635996.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
YP_001635997.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
YP_001635998.1	PFAM: ribosomal protein S9; KEGG: rrs:RoseRS_1154 ribosomal protein S9
YP_001635999.1	TIGRFAM: methyltransferase; PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_2609 putative methyltransferase
YP_001636000.1	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA
YP_001636001.1	KEGG: rrs:RoseRS_2611 hypothetical protein
YP_001636002.1	PFAM: protein of unknown function DUF177; KEGG: rrs:RoseRS_2612 protein of unknown function DUF177
YP_001636003.1	TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: rca:Rcas_1804 ribosomal protein L32
YP_001636004.1	KEGG: rrs:RoseRS_2614 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
YP_001636005.1	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: gtn:GTNG_1042 malonyl CoA-acyl carrier protein transacylase (FabD)
YP_001636006.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_2289 short-chain dehydrogenase/reductase SDR
YP_001636007.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rca:Rcas_2536 short-chain dehydrogenase/reductase SDR
YP_001636008.1	TIGRFAM: phytoene desaturase; PFAM: amine oxidase; KEGG: rca:Rcas_2535 zeta-phytoene desaturase
YP_001636009.1	PFAM: type II secretion system protein E; KEGG: rrs:RoseRS_1876 type II secretion system protein E
YP_001636010.1	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: rca:Rcas_3240 AAA ATPase central domain protein
YP_001636011.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; KEGG: rrs:RoseRS_1879 tetratricopeptide TPR_2 repeat protein
YP_001636012.1	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)
YP_001636013.1	KEGG: rca:Rcas_2378 hypothetical protein
YP_001636015.1	PFAM: peptidase domain protein; KEGG: rrs:RoseRS_2358 hypothetical protein
YP_001636016.1	KEGG: rrs:RoseRS_2357 hypothetical protein
YP_001636017.1	TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: rrs:RoseRS_3075 DNA polymerase III, delta subunit
YP_001636018.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase
YP_001636019.1	TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: rrs:RoseRS_3077 integral membrane protein MviN
YP_001636020.1	TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_0943 phytoene dehydrogenase-related protein
YP_001636021.1	PFAM: electron transport protein SCO1/SenC; KEGG: rrs:RoseRS_0931 electron transport protein SCO1/SenC
YP_001636022.1	KEGG: rrs:RoseRS_0932 hypothetical protein
YP_001636023.1	PFAM: cytochrome c oxidase subunit II; KEGG: rca:Rcas_1574 cytochrome c oxidase subunit II
YP_001636024.1	PFAM: cytochrome c oxidase subunit I; KEGG: rrs:RoseRS_0934 cytochrome c oxidase, subunit I
YP_001636025.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_4373 ABC transporter related
YP_001636026.1	PFAM: periplasmic binding protein; KEGG: rrs:RoseRS_3565 periplasmic binding protein
YP_001636027.1	PFAM: transport system permease protein; KEGG: rca:Rcas_4371 transport system permease protein
YP_001636028.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rrs:RoseRS_3570 antibiotic biosynthesis monooxygenase
YP_001636029.1	PFAM: iron dependent repressor; KEGG: rrs:RoseRS_3574 iron dependent repressor
YP_001636030.1	PFAM: protein of unknown function DUF820; KEGG: rca:Rcas_0614 protein of unknown function DUF820
YP_001636031.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rca:Rcas_2781 integral membrane sensor signal transduction histidine kinase
YP_001636032.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rca:Rcas_2782 two component transcriptional regulator, winged helix family
YP_001636033.1	PFAM: protein of unknown function DUF305; KEGG: rca:Rcas_2783 protein of unknown function DUF305
YP_001636034.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_2057 integral membrane sensor signal transduction histidine kinase
YP_001636035.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_2290 two component transcriptional regulator, winged helix family
YP_001636036.1	KEGG: rca:Rcas_2926 hypothetical protein
YP_001636037.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_0530 ABC transporter related
YP_001636038.1	KEGG: rca:Rcas_3552 hypothetical protein
YP_001636040.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: gsu:GSU0562 hypothetical protein
YP_001636041.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rme:Rmet_4656 antibiotic biosynthesis monooxygenase
YP_001636042.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sit:TM1040_3008 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001636043.1	PFAM: transposase IS4 family protein; KEGG: mhu:Mhun_3123 transposase, IS4
YP_001636044.1	PFAM: transposase IS4 family protein; KEGG: asa:ASA_0455 transposase B
YP_001636045.1	KEGG: rso:RSp0990 TIS1421-transposase protein A
YP_001636046.1	KEGG: bpu:BPUM_1127 hypothetical protein
YP_001636047.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mac:MA0479 cyclohexanol dehydrogenase
YP_001636048.1	KEGG: bha:BH0848 hypothetical protein
YP_001636049.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: mxa:MXAN_6138 RibD domain protein
YP_001636050.1	KEGG: mes:Meso_2460 methyltransferase type 11
YP_001636051.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: bce:BC3158 pyrimidine reductase
YP_001636052.1	PFAM: N-acetyltransferase; KEGG: mxa:MXAN_1194 N-acetyltransferase family protein
YP_001636053.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mav:MAV_4539 methyltransferase small domain family protein
YP_001636054.1	KEGG: chu:CHU_2319 hypothetical protein
YP_001636055.1	KEGG: sth:STH2078 hypothetical protein
YP_001636056.1	KEGG: smd:Smed_5705 protein of unknown function DUF1428
YP_001636057.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: stp:Strop_2683 bifunctional deaminase-reductase domain protein
YP_001636058.1	PFAM: O-antigen polymerase; KEGG: rrs:RoseRS_2654 hypothetical protein
YP_001636059.1	SMART: TIR protein; KEGG: mba:Mbar_A2861 hypothetical protein
YP_001636060.1	PFAM: transposase IS4 family protein; KEGG: bxe:Bxe_B2711 putative transposase
YP_001636061.1	KEGG: rrs:RoseRS_1995 PilT protein domain protein
YP_001636062.1	TIGRFAM: prevent-host-death family protein; KEGG: rrs:RoseRS_1996 prevent-host-death family protein
YP_001636063.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_3984 methyltransferase type 11
YP_001636064.1	KEGG: rrs:RoseRS_3210 protein of unknown function DUF11
YP_001636065.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_0726 ABC transporter related
YP_001636066.1	KEGG: rca:Rcas_0725 ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein
YP_001636067.1	may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling
YP_001636068.1	PFAM: CBS domain containing protein; protein of unknown function DUF190; KEGG: rrs:RoseRS_2494 CBS domain containing protein
YP_001636069.1	PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: rca:Rcas_2016 ATPase AAA-2 domain protein
YP_001636070.1	PFAM: RNA binding S1 domain protein; KEGG: rrs:RoseRS_1730 RNA binding S1 domain protein
YP_001636072.1	PFAM: beta-lactamase domain protein; KEGG: rrs:RoseRS_1152 beta-lactamase domain protein
YP_001636073.1	PFAM: Rhodanese domain protein; KEGG: mtf:TBFG_10329 hypothetical transcriptional regulatory protein, ArsR-family
YP_001636074.1	PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: rca:Rcas_0847 PHP domain protein
YP_001636075.1	PFAM: NUDIX hydrolase; KEGG: rca:Rcas_1616 NUDIX hydrolase
YP_001636077.1	KEGG: cbh:CLC_0878 hypothetical protein
YP_001636078.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: cch:Cag_0899 5-formyltetrahydrofolate cyclo-ligase, putative
YP_001636079.1	KEGG: bba:Bd1705 putative 2-nitropropane dioxygenase
YP_001636080.1	PFAM: WD40 domain protein beta Propeller; KEGG: rrs:RoseRS_1631 WD40 domain protein beta propeller
YP_001636081.1	PFAM: Diacylglycerol kinase accessory region; diacylglycerol kinase catalytic region; KEGG: rca:Rcas_2259 diacylglycerol kinase catalytic region
YP_001636082.1	PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: rca:Rcas_0047 integrase family protein
YP_001636083.1	TIGRFAM: glycyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; KEGG: rca:Rcas_0046 glycyl-tRNA synthetase
YP_001636084.1	PFAM: oxidoreductase molybdopterin binding; KEGG: rxy:Rxyl_2351 oxidoreductase, molybdopterin binding protein
YP_001636085.1	PFAM: transcriptional regulator PadR family protein; KEGG: rca:Rcas_2179 transcriptional regulator, PadR-like family
YP_001636086.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rca:Rcas_2178 molybdenum ABC transporter, periplasmic molybdate-binding protein
YP_001636087.1	TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1797 molybdate ABC transporter, inner membrane subunit
YP_001636088.1	PFAM: cyclase family protein; KEGG: rrs:RoseRS_4339 cyclase family protein
YP_001636089.1	PFAM: Translin; KEGG: rrs:RoseRS_1215 translin
YP_001636090.1	KEGG: rci:RCIX1713 putative signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001636091.1	PFAM: KaiB domain protein; KEGG: mma:MM_1091 thiol-disulfide isomerase
YP_001636092.1	KEGG: ppd:Ppro_3008 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001636093.1	PFAM: prolipoprotein diacylglyceryl transferase; KEGG: rrs:RoseRS_0326 prolipoprotein diacylglyceryl transferase
YP_001636094.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: rca:Rcas_0861 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_001636095.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_001636096.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
YP_001636097.1	KEGG: rca:Rcas_0260 molybdopterin-guanine dinucleotide biosynthesis protein A-like protein
YP_001636098.1	PFAM: WD-40 repeat protein; SMP-30/Gluconolaconase/LRE domain protein; KEGG: rrs:RoseRS_0892 WD-40 repeat protein
YP_001636099.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mca:MCA0083 methyltransferase, UbiE/COQ5 family
YP_001636100.1	PFAM: thioesterase superfamily protein; KEGG: rca:Rcas_0016 thioesterase superfamily protein
YP_001636101.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_2290 two component transcriptional regulator, winged helix family
YP_001636102.1	functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins
YP_001636103.1	MDM; functions in conversion of succinate to propionate
YP_001636104.1	KEGG: rca:Rcas_3871 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase
YP_001636105.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: tth:TTC1334 carboxypeptidase G2 precursor
YP_001636106.1	PFAM: aminoglycoside phosphotransferase; KEGG: dge:Dgeo_2256 aminoglycoside phosphotransferase
YP_001636107.1	KEGG: sru:SRU_2360 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969
YP_001636108.1	PFAM: homogentisate 12-dioxygenase; KEGG: bcy:Bcer98_0230 homogentisate 12-dioxygenase
YP_001636109.1	PFAM: protein of unknown function DUF820; KEGG: rca:Rcas_2194 protein of unknown function DUF820
YP_001636110.1	PFAM: Abortive infection protein; KEGG: rrs:RoseRS_0951 abortive infection protein
YP_001636111.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_2566 anti-sigma-factor antagonist
YP_001636112.1	PFAM: oxidoreductase domain protein; Prephenate dehydrogenase; NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: rrs:RoseRS_2023 prephenate dehydrogenase
YP_001636113.1	KEGG: rrs:RoseRS_2022 hypothetical protein
YP_001636114.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
YP_001636115.1	PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; KEGG: rrs:RoseRS_1065 glycosyl transferase, group 1
YP_001636116.1	KEGG: rca:Rcas_4073 SAM-dependent methyltransferase
YP_001636117.1	PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: rrs:RoseRS_3698 nucleotidyl transferase
YP_001636118.1	TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; KEGG: rrs:RoseRS_3699 glucose-1-phosphate adenylyltransferase
YP_001636120.1	KEGG: cch:Cag_1737 hypothetical protein
YP_001636121.1	PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: swo:Swol_0503 site-specific DNA methylase-like protein
YP_001636122.1	PFAM: UspA domain protein; KEGG: rca:Rcas_3776 UspA domain protein
YP_001636123.1	PFAM: MOSC domain containing protein; KEGG: dge:Dgeo_0846 MOSC domain protein
YP_001636124.1	KEGG: rrs:RoseRS_2034 hypothetical protein
YP_001636125.1	PFAM: UspA domain protein; KEGG: rca:Rcas_3007 UspA domain protein
YP_001636126.1	PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: rrs:RoseRS_1251 peptidase S41
YP_001636127.1	PFAM: aminotransferase class I and II; KEGG: rrs:RoseRS_2027 putative transcriptional regulator, GntR family
YP_001636128.1	PFAM: pseudouridine synthase; KEGG: rrs:RoseRS_2639 pseudouridine synthase
YP_001636130.1	KEGG: rca:Rcas_3438 hypothetical protein
YP_001636131.1	PFAM: Alkaline phosphatase; KEGG: rrs:RoseRS_1990 alkaline phosphatase
YP_001636132.1	PFAM: NMT1/THI5 like domain protein; KEGG: bja:bll3316 ABC transporter substrate-binding protein
YP_001636133.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppr:PBPRB0686 putative ABC transporter permease protein
YP_001636134.1	PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rba:RB5196 alpha-amylase, amylosucrase
YP_001636135.1	PFAM: protein of unknown function DUF156; KEGG: rca:Rcas_4106 protein of unknown function DUF156
YP_001636136.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: rrs:RoseRS_3294 thioredoxin
YP_001636137.1	PFAM: beta-lactamase domain protein; KEGG: rca:Rcas_3617 beta-lactamase domain protein
YP_001636138.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_001636139.1	KEGG: rca:Rcas_1976 hypothetical protein
YP_001636140.1	KEGG: mlo:mlr3260 hypothetical protein
YP_001636141.1	PFAM: Polyphosphate kinase; KEGG: rrs:RoseRS_3717 polyphosphate kinase
YP_001636142.1	PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3888 major facilitator superfamily MFS_1
YP_001636143.1	KEGG: rca:Rcas_2612 hypothetical protein
YP_001636144.1	KEGG: rrs:RoseRS_0243 glycosyl transferase, family 39
YP_001636145.1	KEGG: rrs:RoseRS_0242 NHL repeat containing protein
YP_001636146.1	KEGG: rrs:RoseRS_3733 hypothetical protein
YP_001636147.1	TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: aba:Acid345_2814 6-phosphogluconolactonase
YP_001636148.1	PFAM: protein of unknown function DUF820; KEGG: rca:Rcas_0614 protein of unknown function DUF820
YP_001636149.1	light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production
YP_001636150.1	PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; KEGG: syf:Synpcc7942_1359 coenzyme F420 hydrogenase
YP_001636151.1	light-independent reduction of protochlorophyllide to form chlorophyllide a
YP_001636152.1	light-independent reduction of protochlorophyllide to form chlorophyllide a
YP_001636153.1	KEGG: rca:Rcas_0534 tetratricopeptide TPR_2 repeat protein
YP_001636154.1	KEGG: rca:Rcas_0533 hypothetical protein
YP_001636155.1	catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
YP_001636156.1	PFAM: aminotransferase class I and II; KEGG: rrs:RoseRS_0576 aminotransferase, class I and II
YP_001636157.1	PFAM: cobalbumin biosynthesis protein; KEGG: rca:Rcas_0634 adenosylcobinamide-phosphate guanylyltransferase
YP_001636158.1	TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: rrs:RoseRS_0574 cobyrinic acid a,c-diamide synthase
YP_001636159.1	TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rca:Rcas_0636 uroporphyrin-III C-methyltransferase
YP_001636160.1	TIGRFAM: precorrin-3B C17-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: rrs:RoseRS_0572 precorrin-3B C17-methyltransferase
YP_001636161.1	KEGG: rca:Rcas_0638 precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_001636162.1	TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rrs:RoseRS_0570 precorrin-2 C20-methyltransferase
YP_001636163.1	KEGG: rrs:RoseRS_0569 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_001636164.1	Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A
YP_001636165.1	PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: rrs:RoseRS_0567 precorrin-8X methylmutase CbiC/CobH
YP_001636166.1	KEGG: rca:Rcas_0643 multimeric flavodoxin WrbA-like protein
YP_001636167.1	PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: rca:Rcas_0644 cobalamin (vitamin B12) biosynthesis CbiX protein
YP_001636168.1	TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: rrs:RoseRS_0564 cobalamin biosynthesis protein CobD
YP_001636169.1	KEGG: rrs:RoseRS_0563 cobalt ABC transporter, ATPase subunit; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001636170.1	TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: rrs:RoseRS_0562 cobalt ABC transporter, inner membrane subunit CbiQ
YP_001636171.1	PFAM: Cobalt transport protein CbiN; KEGG: rrs:RoseRS_0561 cobalt transport protein
YP_001636172.1	TIGRFAM: cobalamin biosynthesis protein CbiM; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: rrs:RoseRS_0560 cobalamin biosynthesis protein CbiM
YP_001636173.1	KEGG: rrs:RoseRS_0559 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase
YP_001636174.1	KEGG: rrs:RoseRS_0558 cobaltochelatase, CobN subunit; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/magnesium chelatase
YP_001636175.1	KEGG: rca:Rcas_0649 cob(I)alamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
YP_001636176.1	PFAM: blue (type 1) copper domain protein; cytochrome c oxidase subunit II; KEGG: sru:SRU_1593 hypothetical protein
YP_001636177.1	KEGG: sus:Acid_5295 hypothetical protein
YP_001636178.1	KEGG: sus:Acid_5296 hypothetical protein
YP_001636179.1	PFAM: Domain of unknown function DUF1801; KEGG: aau:AAur_0600 hypothetical protein
YP_001636180.1	threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway
YP_001636181.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: rrs:RoseRS_4400 diguanylate cyclase
YP_001636182.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; aminotransferase class-III; KEGG: rca:Rcas_0734 threonine aldolase
YP_001636183.1	catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine
YP_001636184.1	KEGG: rca:Rcas_1540 hypothetical protein
YP_001636185.1	oxidative; catalyzes the formation of divinylprotochlorophyllide from magnesium-protoporphyrin IX 13-monomethyl ester in isocyclic ring formation in chlorophyll biosynthesis
YP_001636186.1	catalyzes the formation of Mg-protoporphyrin IX from protoporphyrin IX and Mg(2+); first committed step of chlorophyll biosynthesis
YP_001636187.1	PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_1903 PucC protein
YP_001636188.1	KEGG: ppd:Ppro_3377 shikimate/quinate 5-dehydrogenase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like
YP_001636189.1	KEGG: rrs:RoseRS_1750 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase
YP_001636190.1	PFAM: Uroporphyrinogen III synthase HEM4; KEGG: rrs:RoseRS_1751 uroporphyrinogen III synthase HEM4
YP_001636191.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_001636192.1	KEGG: rrs:RoseRS_1748 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D)
YP_001636193.1	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway
YP_001636194.1	catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis
YP_001636195.1	TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: rca:Rcas_3585 oligoendopeptidase F
YP_001636196.1	PFAM: major facilitator superfamily MFS_1; KEGG: rca:Rcas_2484 major facilitator superfamily MFS_1
YP_001636197.1	PFAM: Amidohydrolase 3; KEGG: rca:Rcas_3832 amidohydrolase 3
YP_001636198.1	KEGG: spu:584913 similar to serine active site containing 1
YP_001636199.1	PFAM: peptidase M23B; KEGG: rrs:RoseRS_4626 peptidase M23B
YP_001636200.1	KEGG: ana:alr5291 similar to alkaline phosphatase
YP_001636201.1	KEGG: rca:Rcas_0254 hypothetical protein
YP_001636202.1	KEGG: rca:Rcas_3864 hypothetical protein
YP_001636203.1	KEGG: rrs:RoseRS_3023 hypothetical protein
YP_001636204.1	PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: rca:Rcas_4057 ATP-dependent Clp protease adaptor protein ClpS
YP_001636205.1	PFAM: von Willebrand factor type A; KEGG: rca:Rcas_1363 von Willebrand factor type A
YP_001636206.1	PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rca:Rcas_2849 protein serine phosphatase with GAF(s) sensor(s)
YP_001636207.1	TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: rca:Rcas_3533 glycine cleavage T protein (aminomethyl transferase)
YP_001636208.1	PFAM: cytochrome P450; KEGG: fra:Francci3_4464 cytochrome P450
YP_001636209.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rca:Rcas_2929 short-chain dehydrogenase/reductase SDR
YP_001636210.1	PFAM: LmbE family protein; KEGG: rca:Rcas_1525 LmbE family protein
YP_001636211.1	PFAM: aminotransferase class-III; KEGG: ace:Acel_1287 aminotransferase class-III
YP_001636212.1	KEGG: rrs:RoseRS_4581 hypothetical protein
YP_001636213.1	KEGG: rca:Rcas_0177 hypothetical protein
YP_001636214.1	PFAM: GCN5-related N-acetyltransferase; KEGG: afw:Anae109_1562 GCN5-related N-acetyltransferase
YP_001636215.1	catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge
YP_001636216.1	PFAM: regulatory protein MarR; KEGG: gsu:GSU1483 transcriptional regulator, MarR family
YP_001636217.1	PFAM: ComEC/Rec2-related protein; KEGG: rrs:RoseRS_1609 ComEC/Rec2-related protein
YP_001636219.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: rrs:RoseRS_2053 peptidase S9, prolyl oligopeptidase active site domain protein
YP_001636220.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rca:Rcas_1580 histidine kinase
YP_001636221.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rca:Rcas_1579 two component transcriptional regulator, LuxR family
YP_001636222.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_0378 methyltransferase type 11
YP_001636223.1	PFAM: dienelactone hydrolase; KEGG: kra:Krad_3055 carboxymethylenebutenolidase
YP_001636224.1	PFAM: GAF domain protein; KEGG: rca:Rcas_2360 PAS fold-4 domain protein
YP_001636225.1	PFAM: peptidase M16 domain protein; KEGG: rca:Rcas_1147 peptidase M16 domain protein
YP_001636226.1	KEGG: rrs:RoseRS_4204 FAD dependent oxidoreductase
YP_001636227.1	PFAM: peptidase M19 renal dipeptidase; KEGG: rca:Rcas_3312 membrane dipeptidase
YP_001636228.1	TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rrs:RoseRS_4522 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
YP_001636229.1	PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: rrs:RoseRS_0219 formate--tetrahydrofolate ligase
YP_001636230.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: rca:Rcas_2773 peptidase S8 and S53 subtilisin kexin sedolisin
YP_001636231.1	KEGG: rrs:RoseRS_4360 hypothetical protein
YP_001636232.1	KEGG: rrs:RoseRS_4324 hypothetical protein
YP_001636233.1	PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; Sigma-70 region 4 type 2; KEGG: rca:Rcas_4428 two component transcriptional regulator, LuxR family
YP_001636234.1	KEGG: rrs:RoseRS_4406 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain
YP_001636235.1	PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: rrs:RoseRS_0704 6-pyruvoyl tetrahydropterin synthase and hypothetical protein
YP_001636236.1	PFAM: GTP cyclohydrolase I; KEGG: rca:Rcas_0301 GTP cyclohydrolase I
YP_001636237.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rca:Rcas_0302 short-chain dehydrogenase/reductase SDR
YP_001636238.1	TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: rrs:RoseRS_3848 excinuclease ABC, A subunit
YP_001636239.1	KEGG: rca:Rcas_0803 N-acetylglucosamine-1-phosphate uridyltransferase-like protein
YP_001636240.1	PFAM: response regulator receiver; SMART: GGDEF domain containing protein; KEGG: rrs:RoseRS_4451 response regulator receiver modulated diguanylate cyclase
YP_001636241.1	KEGG: rca:Rcas_0805 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001636242.1	PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_4453 alpha/beta hydrolase fold
YP_001636243.1	TIGRFAM: valyl-tRNA synthetase; KEGG: rca:Rcas_0367 valyl-tRNA synthetase
YP_001636244.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_0694 ABC transporter related
YP_001636245.1	PFAM: Forkhead-associated protein; KEGG: rca:Rcas_2395 FHA domain containing protein
YP_001636246.1	PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_2768 von Willebrand factor, type A
YP_001636247.1	PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rca:Rcas_2393 serine/threonine protein kinase
YP_001636248.1	PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_2766 protein phosphatase 2C domain protein
YP_001636249.1	PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: rca:Rcas_2391 protein serine/threonine phosphatase
YP_001636250.1	PFAM: Forkhead-associated protein; ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: rrs:RoseRS_3935 FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits
YP_001636251.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: chy:CHY_0677 transcriptional regulator, MerR family
YP_001636252.1	PFAM: protein of unknown function UPF0118; KEGG: rrs:RoseRS_2291 protein of unknown function UPF0118
YP_001636253.1	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: rrs:RoseRS_2026 metal dependent phosphohydrolase
YP_001636254.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_1481 short-chain dehydrogenase/reductase SDR
YP_001636255.1	PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: tpt:Tpet_0358 methyltransferase type 11
YP_001636257.1	KEGG: rca:Rcas_0209 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein
YP_001636258.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rca:Rcas_3165 acyl-CoA dehydrogenase domain protein
YP_001636259.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: rca:Rcas_1990 iron-containing alcohol dehydrogenase
YP_001636260.1	PFAM: ATP-binding region ATPase domain protein; KEGG: rca:Rcas_0675 putative anti-sigma regulatory factor, serine/threonine protein kinase
YP_001636261.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rca:Rcas_0676 anti-sigma-factor antagonist
YP_001636262.1	PFAM: phosphatidate cytidylyltransferase; KEGG: rrs:RoseRS_3363 phosphatidate cytidylyltransferase
YP_001636263.1	PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: rci:LRC60 predicted phosphodiesterase/nucleotide pyrophosphatase
YP_001636264.1	KEGG: rrs:RoseRS_2363 hypothetical protein
YP_001636265.1	KEGG: rrs:RoseRS_1292 DsbA oxidoreductase
YP_001636266.1	KEGG: rca:Rcas_1661 DsbA oxidoreductase
YP_001636267.1	PFAM: regulatory protein MarR; KEGG: efa:EF1668 transcriptional regulator, MarR family
YP_001636268.1	PFAM: extracellular solute-binding protein family 1; KEGG: bca:BCE_1899 extracellular solute-binding protein, putative
YP_001636269.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lin:lin0218 similar to sugar ABC transporters, permease proteins
YP_001636270.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcz:BCZK1636 sugar ABC transporter, permease
YP_001636271.1	catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P
YP_001636272.1	KEGG: rrs:RoseRS_1850 hypothetical protein
YP_001636274.1	PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_1843 von Willebrand factor, type A
YP_001636275.1	catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate
YP_001636276.1	KEGG: rca:Rcas_3029 hypothetical protein
YP_001636277.1	KEGG: tel:tll1589 hypothetical protein
YP_001636278.1	PFAM: Squalene/phytoene synthase; KEGG: rrs:RoseRS_2117 squalene/phytoene synthase
YP_001636279.1	PFAM: regulatory protein MerR; cobalamin B12-binding domain protein; KEGG: rrs:RoseRS_2116 regulatory protein, MerR
YP_001636280.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_1853 NAD-dependent epimerase/dehydratase
YP_001636281.1	PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: rca:Rcas_3282 nucleotidyl transferase
YP_001636282.1	TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: bra:BRADO4474 mechanosensitive channel
YP_001636283.1	KEGG: rrs:RoseRS_1896 hypothetical protein
YP_001636284.1	PFAM: UspA domain protein; KEGG: deb:DehaBAV1_1111 UspA domain protein
YP_001636285.1	TIGRFAM: small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; Miro domain protein; KEGG: rca:Rcas_0086 translation elongation factor G
YP_001636286.1	TIGRFAM: isoleucyl-tRNA synthetase; KEGG: rca:Rcas_0322 isoleucyl-tRNA synthetase
YP_001636287.1	KEGG: rrs:RoseRS_2119 2-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein
YP_001636288.1	PFAM: histidinol dehydrogenase; KEGG: rca:Rcas_2906 histidinol dehydrogenase
YP_001636289.1	PFAM: protein of unknown function YGGT; KEGG: rrs:RoseRS_3178 protein of unknown function YGGT
YP_001636290.1	KEGG: rrs:RoseRS_3177 spermidine synthase-like protein
YP_001636291.1	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: rrs:RoseRS_1715 HNH endonuclease
YP_001636292.1	PFAM: protein of unknown function UPF0102; KEGG: rrs:RoseRS_1723 protein of unknown function UPF0102
YP_001636293.1	PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sat:SYN_00017 superfamily II DNA/RNA helicase, SNF2 family
YP_001636294.1	PFAM: protein of unknown function DUF1156; KEGG: mca:MCA3008 hypothetical protein
YP_001636295.1	KEGG: rpb:RPB_2979 hypothetical protein
YP_001636296.1	KEGG: rpb:RPB_2980 hypothetical protein
YP_001636297.1	KEGG: rrs:RoseRS_3563 ATPase (AAA+ superfamily)-like protein
YP_001636298.1	PFAM: diacylglycerol kinase catalytic region; KEGG: rrs:RoseRS_2518 diacylglycerol kinase, catalytic region
YP_001636299.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_001636300.1	PFAM: protein of unknown function DUF343; KEGG: rca:Rcas_4415 protein of unknown function DUF343
YP_001636301.1	KEGG: rca:Rcas_4414 metallophosphoesterase
YP_001636302.1	PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: rca:Rcas_4413 phosphoribosylanthranilate isomerase
YP_001636303.1	PFAM: protein of unknown function DUF88; KEGG: rrs:RoseRS_3445 protein of unknown function DUF88
YP_001636304.1	PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_0375 glycosyl transferase family 2
YP_001636305.1	KEGG: rca:Rcas_0972 hypothetical protein
YP_001636306.1	PFAM: ABC-2 type transporter; KEGG: rca:Rcas_0971 ABC-2 type transporter
YP_001636307.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_0970 ABC transporter related
YP_001636308.1	PFAM: regulatory protein TetR; KEGG: rrs:RoseRS_3834 transcriptional regulator, TetR family
YP_001636309.1	KEGG: rrs:RoseRS_3835 hypothetical protein
YP_001636310.1	PFAM: inositol monophosphatase; KEGG: rrs:RoseRS_3316 inositol monophosphatase
YP_001636311.1	PFAM: Radical SAM domain protein; KEGG: rrs:RoseRS_3317 radical SAM domain protein
YP_001636312.1	TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: rca:Rcas_4079 ribosomal-protein-alanine acetyltransferase
YP_001636313.1	KEGG: rca:Rcas_4080 hypothetical protein
YP_001636314.1	KEGG: rrs:RoseRS_1208 hypothetical protein
YP_001636315.1	KEGG: rrs:RoseRS_1208 hypothetical protein
YP_001636316.1	protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP
YP_001636317.1	PFAM: Stage V sporulation protein S; KEGG: rrs:RoseRS_0329 stage V sporulation protein S
YP_001636318.1	PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: rca:Rcas_3932 putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
YP_001636319.1	KEGG: rrs:RoseRS_2006 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease
YP_001636320.1	PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rrs:RoseRS_2058 citrate transporter
YP_001636321.1	PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; KEGG: hma:rrnAC1479 sucrose-6-phosphate hydrolase
YP_001636322.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: syn:slr0531 ABC-type glucosylglycerol transport system permease protein
YP_001636323.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: syn:slr0530 ABC-type glucosylglycerol transport system permease protein
YP_001636324.1	PFAM: extracellular solute-binding protein family 1; KEGG: syn:slr0529 ABC-type glucosylglycerol transport system substrate-binding protein
YP_001636325.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: art:Arth_0397 transcriptional regulator, LacI family
YP_001636326.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: rca:Rcas_2543 ParB-like partition protein
YP_001636327.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc00268 putative oxidoreductase protein
YP_001636328.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_0221 anti-sigma-factor antagonist
YP_001636330.1	TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: rrs:RoseRS_4131 chaperonin GroEL
YP_001636331.1	PFAM: chaperonin Cpn10; KEGG: rca:Rcas_1212 chaperonin Cpn10
YP_001636333.1	TIGRFAM: conserved hypothetical integral membrane protein; PFAM: conserved hypothetical protein; KEGG: bld:BLi04068 YwaF
YP_001636335.1	PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mhu:Mhun_0060 serine phosphatase
YP_001636337.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: pfl:PFL_5026 cobalamin synthesis protein/P47K family protein
YP_001636338.1	KEGG: rca:Rcas_0002 secreted hydrolase-like protein
YP_001636339.1	KEGG: rca:Rcas_2318 hypothetical protein
YP_001636340.1	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis
YP_001636341.1	PFAM: protein of unknown function DUF1332; KEGG: rfr:Rfer_1818 protein of unknown function DUF1332
YP_001636342.1	KEGG: rrs:RoseRS_2803 chromosome segregation ATPase-like protein
YP_001636343.1	KEGG: rrs:RoseRS_4544 hypothetical protein
YP_001636344.1	KEGG: rca:Rcas_1430 hypothetical protein
YP_001636345.1	PFAM: GAF domain protein; KEGG: rca:Rcas_3177 adenylate/guanylate cyclase with GAF and PAS/PAC sensors
YP_001636346.1	KEGG: rca:Rcas_3420 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001636347.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_1618 multi-sensor signal transduction histidine kinase
YP_001636348.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; KEGG: rrs:RoseRS_1619 multi-sensor signal transduction histidine kinase
YP_001636349.1	KEGG: cme:CMH001C similar to hedgehog protein Pfam: Kelch_2 Kelch_1 Hint PROSITE: INTEIN_N_TER PRO_RICH THR_RICH
YP_001636351.1	TIGRFAM: leucyl-tRNA synthetase; KEGG: lme:LEUM_0635 leucyl-tRNA synthetase
YP_001636352.1	KEGG: ana:asr3468 hypothetical protein
YP_001636353.1	TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: rca:Rcas_3795 hydrogenase expression/formation protein HypE
YP_001636354.1	TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: rrs:RoseRS_0974 hydrogenase expression/formation protein HypD
YP_001636355.1	TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: rca:Rcas_3797 hydrogenase assembly chaperone HypC/HupF
YP_001636356.1	PFAM: NHL repeat containing protein; KEGG: rca:Rcas_3798 NHL repeat containing protein
YP_001636357.1	PFAM: nitrogen-fixing NifU domain protein; Rieske [2Fe-2S] domain protein; KEGG: rca:Rcas_3799 nitrogen-fixing NifU domain protein
YP_001636358.1	KEGG: rca:Rcas_3800 hypothetical protein
YP_001636359.1	KEGG: rca:Rcas_3801 tetratricopeptide TPR_4
YP_001636360.1	KEGG: rca:Rcas_3803 hydrogenase maturation protease
YP_001636361.1	TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: rca:Rcas_3804 hydrogenase maturation protease
YP_001636362.1	PFAM: nickel-dependent hydrogenase large subunit; KEGG: msm:MSMEG_2263 hydrogenase-2, large subunit
YP_001636363.1	PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: rca:Rcas_3806 NADH ubiquinone oxidoreductase 20 kDa subunit
YP_001636364.1	TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: rca:Rcas_3807 hydrogenase accessory protein HypB
YP_001636365.1	TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; KEGG: rca:Rcas_3810 hydrogenase nickel insertion protein HypA
YP_001636366.1	PFAM: protein of unknown function DUF1641; KEGG: rca:Rcas_3808 hypothetical protein
YP_001636367.1	TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: rca:Rcas_1847 (NiFe) hydrogenase maturation protein HypF
YP_001636368.1	KEGG: rrs:RoseRS_2919 protein of unknown function DUF323
YP_001636369.1	PFAM: protein of unknown function DUF323; KEGG: rrs:RoseRS_2919 protein of unknown function DUF323
YP_001636370.1	KEGG: mhu:Mhun_2049 hypothetical protein
YP_001636371.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rca:Rcas_2774 endonuclease/exonuclease/phosphatase
YP_001636372.1	KEGG: cbe:Cbei_0392 cyanophycinase
YP_001636373.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gur:Gura_2052 binding-protein-dependent transport systems inner membrane component
YP_001636374.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bld:BLi01227 oligopeptide ABC transporter (permease); RBL00622
YP_001636375.1	PFAM: extracellular solute-binding protein family 5; KEGG: atc:AGR_L_3512 oligopeptide-binding protein AppA precursor
YP_001636376.1	TIGRFAM: cyanophycinase; PFAM: peptidase S51 dipeptidase E; KEGG: dsy:DSY0145 hypothetical protein
YP_001636377.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: chy:CHY_0189 transcriptional regulator, GntR family
YP_001636378.1	PFAM: glutathione peroxidase; KEGG: mca:MCA0841 glutathione peroxidase
YP_001636379.1	PFAM: protein of unknown function DUF112 transmembrane; KEGG: rxy:Rxyl_3136 protein of unknown function DUF112, transmembrane
YP_001636380.1	KEGG: rxy:Rxyl_3135 hypothetical protein
YP_001636381.1	PFAM: conserved hypothetical protein; KEGG: rxy:Rxyl_3134 uncharacterized protein UPF0065
YP_001636382.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rca:Rcas_2280 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001636383.1	KEGG: oih:OB3431 hypothetical protein
YP_001636384.1	PFAM: ribosomal protein L28; KEGG: stp:Strop_2855 ribosomal protein L28
YP_001636385.1	KEGG: rrs:RoseRS_3104 hypothetical protein
YP_001636386.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rca:Rcas_2945 cobalamin synthesis protein P47K
YP_001636387.1	TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; KEGG: rrs:RoseRS_2711 YidE/YbjL duplication
YP_001636388.1	PFAM: protein of unknown function DUF59; KEGG: rca:Rcas_1571 protein of unknown function DUF59
YP_001636389.1	PFAM: aromatic amino acid hydroxylase; KEGG: sru:SRU_2069 tryptophan 5-hydroxylase 1
YP_001636390.1	PFAM: SCP-like extracellular; KEGG: rrs:RoseRS_3504 allergen V5/TPX-1 family protein
YP_001636391.1	KEGG: rca:Rcas_2317 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
YP_001636392.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; KR domain protein; KEGG: rrs:RoseRS_2303 short-chain dehydrogenase/reductase SDR
YP_001636393.1	KEGG: rrs:RoseRS_4615 putative transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase
YP_001636394.1	PFAM: phosphoribulokinase/uridine kinase; KEGG: gvi:glr4424 phosphoribulokinase
YP_001636395.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: rrs:RoseRS_2952 transketolase, central region
YP_001636396.1	PFAM: protein of unknown function DUF87; KEGG: rrs:RoseRS_1701 protein of unknown function DUF87
YP_001636397.1	PFAM: response regulator receiver; KEGG: rme:Rmet_4963 histidine kinase
YP_001636398.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_2752 phosphoglycolate phosphatase
YP_001636399.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_0752 alcohol dehydrogenase GroES domain protein
YP_001636400.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mjl:Mjls_3357 HAD-superfamily hydrolase, subfamily IA, variant 1
YP_001636401.1	PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rca:Rcas_0654 ATPase associated with various cellular activities AAA_5
YP_001636402.1	PFAM: VWA containing CoxE family protein; KEGG: rca:Rcas_0655 VWA containing CoxE family protein
YP_001636403.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rca:Rcas_1944 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_001636404.1	KEGG: rrs:RoseRS_3002 hypothetical protein
YP_001636405.1	PFAM: response regulator receiver; KEGG: mbu:Mbur_0695 response regulator receiver
YP_001636406.1	KEGG: sth:STH2398 two-component hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001636407.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: mxa:MXAN_4445 sensory box histidine kinase/response regulator
YP_001636408.1	PFAM: peptidase S14 ClpP; KEGG: rrs:RoseRS_1553 endopeptidase Clp
YP_001636409.1	PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_1554 alpha/beta hydrolase fold
YP_001636410.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
YP_001636411.1	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway
YP_001636412.1	KEGG: rrs:RoseRS_3312 hypothetical protein
YP_001636413.1	KEGG: rrs:RoseRS_1532 PT repeat-containing protein
YP_001636414.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rca:Rcas_0155 multi-sensor signal transduction histidine kinase
YP_001636415.1	PFAM: SEC-C motif domain protein; KEGG: rrs:RoseRS_1602 sec-C motif domain protein
YP_001636416.1	PFAM: protein of unknown function DUF323; KEGG: rrs:RoseRS_0904 protein of unknown function DUF323
YP_001636417.1	KEGG: rrs:RoseRS_3927 hypothetical protein
YP_001636418.1	PFAM: TPR repeat-containing protein; Sel1 domain protein repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rca:Rcas_3220 tetratricopeptide TPR_2 repeat protein
YP_001636419.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: rca:Rcas_3544 peptidylprolyl isomerase
YP_001636420.1	PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_2520 von Willebrand factor, type A
YP_001636422.1	PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rrs:RoseRS_0434 carbamoyl-phosphate synthase L chain, ATP-binding
YP_001636423.1	PFAM: luciferase family protein; KEGG: rca:Rcas_3981 luciferase family protein
YP_001636424.1	PFAM: peptidase C60 sortase A and B; KEGG: rca:Rcas_3681 peptidase C60 sortase A and B
YP_001636425.1	TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; KEGG: rrs:RoseRS_1043 lipoate-protein ligase B
YP_001636426.1	KEGG: rca:Rcas_1074 modification methylase NspV
YP_001636427.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: tth:TT_P0171 hypothetical protein
YP_001636428.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: tth:TT_P0172 diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)
YP_001636429.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
YP_001636430.1	TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rrs:RoseRS_3003 dihydrolipoamide dehydrogenase
YP_001636432.1	PFAM: Pyridoxal-dependent decarboxylase; KEGG: ppu:PP_2552 tyrosine decarboxylase, putative
YP_001636433.1	TIGRFAM: prevent-host-death family protein
YP_001636434.1	KEGG: rca:Rcas_3266 tRNA-guanine transglycosylase, various specificities; TIGRFAM: tRNA-guanine transglycosylase, various specificities; PFAM: Queuine/other tRNA-ribosyltransferase
YP_001636435.1	PFAM: ribosomal RNA methyltransferase; KEGG: rca:Rcas_3259 ribosomal RNA methyltransferase
YP_001636436.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bha:BH2238 protein-tyrosine-phosphatase
YP_001636437.1	PFAM: metalloenzyme domain protein; KEGG: rca:Rcas_0933 metalloenzyme domain protein
YP_001636438.1	PFAM: RNA binding S1 domain protein; KEGG: rrs:RoseRS_4287 RNA binding S1 domain protein
YP_001636439.1	PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: rca:Rcas_3909 ornithine cyclodeaminase
YP_001636440.1	KEGG: ade:Adeh_4305 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase
YP_001636441.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
YP_001636442.1	KEGG: rrs:RoseRS_1703 hypothetical protein
YP_001636443.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1986 methyltransferase type 11
YP_001636445.1	TIGRFAM: glycogen debranching enzyme; PFAM: Amylo-alpha-16-glucosidase; KEGG: syf:Synpcc7942_1575 glycogen debranching enzyme
YP_001636446.1	PFAM: metallophosphoesterase; KEGG: rca:Rcas_1877 metallophosphoesterase
YP_001636448.1	KEGG: gvi:gll4200 similar to cell surface glycoprotein (s-layer protein) related protein
YP_001636449.1	KEGG: cbf:CLI_1252 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein
YP_001636450.1	KEGG: rrs:RoseRS_2927 hypothetical protein
YP_001636451.1	PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_2928 drug resistance transporter, EmrB/QacA subfamily
YP_001636452.1	KEGG: rha:RHA1_ro05154 hypothetical protein
YP_001636453.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_3818 two component transcriptional regulator, winged helix family
YP_001636454.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: rrs:RoseRS_3817 PAS/PAC sensor signal transduction histidine kinase
YP_001636455.1	PFAM: protein of unknown function DUF81; KEGG: aba:Acid345_0096 protein of unknown function DUF81
YP_001636456.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mjl:Mjls_0328 regulatory protein GntR, HTH
YP_001636457.1	PFAM: transposase IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4
YP_001636458.1	PFAM: DNA polymerase beta domain protein region; KEGG: cph:Cpha266_0292 DNA polymerase, beta domain protein region
YP_001636459.1	TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; KEGG: cph:Cpha266_0291 nucleotidyltransferase substrate binding protein, HI0074 family
YP_001636460.1	TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: ter:Tery_1075 phenazine biosynthesis protein PhzF family
YP_001636461.1	PFAM: WD40 domain protein beta Propeller; KEGG: rrs:RoseRS_1421 hypothetical protein
YP_001636462.1	TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: rrs:RoseRS_3828 galactose-1-phosphate uridylyltransferase
YP_001636464.1	KEGG: reu:Reut_A2011 hypothetical protein
YP_001636465.1	PFAM: WD-40 repeat protein; KEGG: mac:MA2525 WD40-repeat containing protein
YP_001636466.1	PFAM: Proprotein convertase P; FG-GAP repeat protein; KEGG: mac:MA0850 cell surface protein
YP_001636467.1	PFAM: regulatory protein MarR; KEGG: btl:BALH_0603 transcriptional regulator, MarR family
YP_001636468.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_3398 ABC transporter related
YP_001636469.1	PFAM: PfkB domain protein; KEGG: rpe:RPE_4816 PfkB domain protein
YP_001636470.1	SMART: alpha amylase catalytic sub domain; KEGG: rca:Rcas_0393 alpha amylase catalytic region
YP_001636471.1	TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_3515 haloacid dehalogenase, type II
YP_001636472.1	KEGG: rca:Rcas_2275 hypothetical protein
YP_001636473.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; KEGG: rrs:RoseRS_1513 protease-associated PA domain protein
YP_001636474.1	PFAM: DoxX family protein; KEGG: btl:BALH_4821 possible membrane protein
YP_001636475.1	PFAM: chaperonin Cpn10; KEGG: rrs:RoseRS_1076 chaperonin Cpn10
YP_001636476.1	TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: rrs:RoseRS_1077 chaperonin GroEL
YP_001636477.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
YP_001636478.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rrs:RoseRS_3944 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_001636479.1	PFAM: aminotransferase class I and II; KEGG: cyb:CYB_0340 aminotransferase, classes I and II
YP_001636481.1	KEGG: ava:Ava_0347 hypothetical protein
YP_001636483.1	TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: CBS domain containing protein; isocitrate/isopropylmalate dehydrogenase; KEGG: rrs:RoseRS_0785 isocitrate dehydrogenase, NADP-dependent
YP_001636484.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: rrs:RoseRS_3678 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
YP_001636485.1	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen
YP_001636486.1	TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: rca:Rcas_1322 NADH (or F420H2) dehydrogenase, subunit C
YP_001636487.1	KEGG: rrs:RoseRS_3675 NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa
YP_001636488.1	TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: rca:Rcas_1320 NADH-quinone oxidoreductase, E subunit
YP_001636489.1	KEGG: rrs:RoseRS_2238 NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit
YP_001636490.1	TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: ferredoxin; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rrs:RoseRS_2237 NADH-quinone oxidoreductase, chain G
YP_001636491.1	PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: rca:Rcas_3388 NADH dehydrogenase (quinone)
YP_001636492.1	TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rca:Rcas_3387 NADH-quinone oxidoreductase, chain I
YP_001636493.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: rca:Rcas_3386 NADH-ubiquinone/plastoquinone oxidoreductase chain 6
YP_001636494.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: rrs:RoseRS_2233 NADH-ubiquinone oxidoreductase, chain 4L
YP_001636495.1	KEGG: rca:Rcas_3384 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I)
YP_001636496.1	KEGG: rca:Rcas_3383 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_001636497.1	KEGG: rrs:RoseRS_2230 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_001636499.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rca:Rcas_3406 enoyl-(acyl-carrier-protein)-like protein
YP_001636500.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: gur:Gura_2908 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_001636501.1	KEGG: rrs:RoseRS_2129 hypothetical protein
YP_001636502.1	KEGG: rrs:RoseRS_0288 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein
YP_001636503.1	dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate
YP_001636504.1	SMART: Pyrrolo-quinoline quinone; KEGG: rca:Rcas_0596 pyrrolo-quinoline quinone
YP_001636505.1	KEGG: mma:MM_0274 putative endonuclease
YP_001636506.1	KEGG: mma:MM_0275 hypothetical protein
YP_001636507.1	PFAM: helicase domain protein; KEGG: mma:MM_0276 superfamily II DNA and RNA helicase
YP_001636508.1	PFAM: helix-hairpin-helix motif; SMART: HhH-GPD family protein; KEGG: mma:MM_0277 T/G-specific DNA glycosylase
YP_001636509.1	PFAM: C-5 cytosine-specific DNA methylase; KEGG: hch:HCH_05719 site-specific DNA methylase
YP_001636510.1	KEGG: rca:Rcas_2072 hypothetical protein
YP_001636511.1	TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: rrs:RoseRS_0331 chromosome segregation protein SMC
YP_001636512.1	TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: rrs:RoseRS_1301 DNA repair protein RecO
YP_001636513.1	PFAM: membrane-flanked domain; KEGG: rca:Rcas_1656 membrane-flanked domain
YP_001636514.1	TIGRFAM: inosine guanosine and xanthosine phosphorylase family; purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: purine phosphorylase family 2; KEGG: rrs:RoseRS_1299 inosine guanosine and xanthosine phosphorylase family
YP_001636515.1	PFAM: peptidase C1A papain; KEGG: reu:Reut_A2014 hypothetical protein
YP_001636517.1	PFAM: PilT protein domain protein
YP_001636519.1	KEGG: rca:Rcas_2991 hypothetical protein
YP_001636520.1	PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_3773 NUDIX hydrolase
YP_001636521.1	PFAM: aminoglycoside phosphotransferase; fructosamine kinase; KEGG: gtn:GTNG_1297 hypothetical protein
YP_001636522.1	PFAM: PspC domain protein; KEGG: rca:Rcas_2330 phage shock protein C, PspC
YP_001636523.1	KEGG: chy:CHY_2568 hypothetical protein
YP_001636524.1	PFAM: Silent information regulator protein Sir2; KEGG: rxy:Rxyl_1341 silent information regulator protein Sir2
YP_001636525.1	PFAM: Phosphoglycerate mutase; KEGG: rrs:RoseRS_1012 phosphoglycerate mutase
YP_001636526.1	KEGG: rrs:RoseRS_0928 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase
YP_001636527.1	TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rca:Rcas_1461 arginase
YP_001636528.1	KEGG: mba:Mbar_A0916 hypothetical protein
YP_001636529.1	23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance
YP_001636530.1	KEGG: rrs:RoseRS_4574 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein
YP_001636532.1	KEGG: cbh:CLC_1681 hypothetical protein
YP_001636533.1	PFAM: Helix-turn-helix type 11 domain protein; KEGG: cya:CYA_0736 hypothetical protein
YP_001636534.1	KEGG: rrs:RoseRS_1865 CRISPR-associated CXXC_CXXC protein Cst1
YP_001636535.1	TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated regulatory protein, DevR family; KEGG: rrs:RoseRS_1866 CRISPR-associated autoregulator, DevR family
YP_001636536.1	TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: rrs:RoseRS_1867 CRISPR-associated protein Cas5 family
YP_001636537.1	KEGG: rrs:RoseRS_1868 CRISPR-associated helicase Cas3; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases
YP_001636538.1	KEGG: rca:Rcas_3302 hypothetical protein
YP_001636539.1	TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: rrs:RoseRS_1870 CRISPR-associated protein Cas1
YP_001636540.1	TIGRFAM: CRISPR-associated protein Cas2; KEGG: rrs:RoseRS_1871 CRISPR-associated protein Cas2
YP_001636541.1	TIGRFAM: CRISPR-associated protein Cas4; PFAM: protein of unknown function DUF83; KEGG: rrs:RoseRS_1872 CRISPR-associated protein Cas4
YP_001636542.1	TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein; KEGG: rca:Rcas_3531 DNA mismatch repair protein MutS
YP_001636543.1	TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: cytidylyltransferase; FAD synthetase; Riboflavin kinase; KEGG: rca:Rcas_1127 riboflavin biosynthesis protein RibF
YP_001636544.1	TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dge:Dgeo_0952 short-chain dehydrogenase/reductase SDR
YP_001636545.1	PFAM: adenylate kinase; KEGG: rca:Rcas_3396 adenylate kinase
YP_001636546.1	PFAM: protein kinase; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0666 protein kinase
YP_001636547.1	KEGG: mma:MM_3056 competence-like protein
YP_001636548.1	PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: rrs:RoseRS_4397 nucleotidyl transferase
YP_001636549.1	PFAM: HEAT domain containing protein; RNA binding S1 domain protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: lsl:LSL_0887 SSU ribosomal protein S1P
YP_001636550.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_3859 AMP-dependent synthetase and ligase
YP_001636551.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_001636552.1	PFAM: proline racemase; KEGG: rrs:RoseRS_0642 proline racemase
YP_001636553.1	PFAM: protein of unknown function DUF299; KEGG: dps:DP1369 hypothetical protein
YP_001636554.1	PFAM: alpha/beta hydrolase fold; cyclic nucleotide-binding; KEGG: rrs:RoseRS_1786 cyclic nucleotide-binding protein
YP_001636555.1	KEGG: rca:Rcas_0289 hypothetical protein
YP_001636556.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: ade:Adeh_2027 NAD-dependent epimerase/dehydratase
YP_001636557.1	Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle
YP_001636558.1	TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: rca:Rcas_3949 glutamyl-tRNA(Gln) amidotransferase, B subunit
YP_001636559.1	PFAM: protein of unknown function DUF1058; SH3 type 3 domain protein; KEGG: rrs:RoseRS_4479 hypothetical protein
YP_001636560.1	KEGG: rca:Rcas_4058 putative virion core protein (lumpy skin disease virus)-like protein
YP_001636561.1	PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_3940 extracellular solute-binding protein, family 1
YP_001636562.1	binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage
YP_001636564.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: sth:STH1770 methanol dehydrogenase regulatory protein
YP_001636565.1	KEGG: gme:Gmet_3085 diguanylate cyclase/phosphodiesterase (GGDEF and EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001636566.1	KEGG: rrs:RoseRS_3572 hypothetical protein
YP_001636568.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: rrs:RoseRS_1585 phosphonate metabolism protein PhnM
YP_001636569.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1586 ABC transporter related
YP_001636570.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1587 ABC transporter related
YP_001636571.1	PFAM: phosphonate metabolism PhnJ; KEGG: rrs:RoseRS_1588 phosphonate metabolism PhnJ
YP_001636572.1	PFAM: phosphonate metabolism; KEGG: rrs:RoseRS_1589 phosphonate metabolism
YP_001636573.1	TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism; KEGG: rrs:RoseRS_1590 uncharacterized enzyme of phosphonate metabolism-like protein
YP_001636574.1	KEGG: rrs:RoseRS_1591 hypothetical protein
YP_001636575.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1592 phosphonate ABC transporter, inner membrane subunit
YP_001636576.1	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1593 phosphonate ABC transporter, inner membrane subunit
YP_001636577.1	KEGG: rrs:RoseRS_1594 phosphonate ABC transporter, ATPase subunit; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001636578.1	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: rrs:RoseRS_1595 phosphonate ABC transporter, periplasmic phosphonate-binding protein
YP_001636579.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rxy:Rxyl_1661 GCN5-related N-acetyltransferase
YP_001636580.1	TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_3205 alcohol dehydrogenase, zinc-binding domain protein
YP_001636581.1	KEGG: rrs:RoseRS_0218 hypothetical protein
YP_001636584.1	KEGG: ter:Tery_0501 hypothetical protein
YP_001636585.1	PFAM: Rhomboid family protein; KEGG: rca:Rcas_2942 rhomboid family protein
YP_001636586.1	PFAM: protein of unknown function DUF114; KEGG: rca:Rcas_2943 protein of unknown function DUF114
YP_001636588.1	KEGG: bth:BT_4079 hypothetical protein
YP_001636589.1	PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: rrs:RoseRS_2338 PHP C-terminal domain protein
YP_001636590.1	KEGG: rrs:RoseRS_0527 hypothetical protein
YP_001636591.1	KEGG: rrs:RoseRS_4017 regulatory protein, ArsR
YP_001636592.1	KEGG: tth:TT_P0070 hypothetical protein
YP_001636593.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rca:Rcas_1696 peptidase dimerisation domain protein
YP_001636595.1	PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rrs:RoseRS_1142 xanthine dehydrogenase
YP_001636596.1	KEGG: ava:Ava_3131 hypothetical protein
YP_001636597.1	KEGG: rrs:RoseRS_0047 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II
YP_001636598.1	KEGG: rca:Rcas_4196 hypothetical protein
YP_001636599.1	KEGG: rrs:RoseRS_3749 NusA antitermination factor; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; KH type 1 domain protein; NusA domain protein; SMART: KH domain protein
YP_001636600.1	PFAM: protein of unknown function DUF448; KEGG: rrs:RoseRS_3750 protein of unknown function DUF448
YP_001636601.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
YP_001636602.1	PFAM: ribosome-binding factor A; KEGG: rrs:RoseRS_3752 ribosome-binding factor A
YP_001636603.1	PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: rca:Rcas_1130 methyltransferase small
YP_001636604.1	PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: rrs:RoseRS_3754 phosphoesterase, RecJ domain protein
YP_001636605.1	TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase II; KEGG: rrs:RoseRS_3755 tRNA pseudouridine synthase B
YP_001636606.1	PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: sth:STH2766 alanyl-tRNA synthetase, truncated
YP_001636607.1	PFAM: protein of unknown function DUF161; KEGG: mta:Moth_0235 protein of unknown function DUF161
YP_001636608.1	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
YP_001636609.1	catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine
YP_001636610.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: atc:AGR_pAT_7 hypothetical protein
YP_001636611.1	PFAM: PfkB domain protein; KEGG: rrs:RoseRS_0487 PfkB domain protein
YP_001636612.1	KEGG: rca:Rcas_0157 hypothetical protein
YP_001636613.1	KEGG: rrs:RoseRS_0485 putative translation initiation factor, aIF-2BI family; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related
YP_001636614.1	TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: rca:Rcas_3325 protein-export membrane protein SecF
YP_001636615.1	TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: rca:Rcas_3326 protein-export membrane protein SecD
YP_001636616.1	PFAM: DSBA oxidoreductase; KEGG: rca:Rcas_3327 DsbA oxidoreductase
YP_001636617.1	PFAM: YceI family protein; KEGG: rrs:RoseRS_3479 YceI family protein
YP_001636618.1	PFAM: DoxX family protein; KEGG: cch:Cag_1140 hypothetical protein
YP_001636619.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: deb:DehaBAV1_0253 ABC transporter related
YP_001636620.1	PFAM: ABC-2 type transporter; KEGG: deh:cbdb_A134 ABC transporter, permease protein
YP_001636621.1	PFAM: ABC-2 type transporter; KEGG: det:DET0114 ABC transporter, substrate-binding protein, putative
YP_001636622.1	KEGG: rrs:RoseRS_2301 permease of the major facilitator superfamily-like protein
YP_001636624.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rca:Rcas_1057 multi-sensor signal transduction histidine kinase
YP_001636625.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rrs:RoseRS_0480 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001636626.1	KEGG: rca:Rcas_3664 hypothetical protein
YP_001636627.1	TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; KEGG: rca:Rcas_1263 cell shape determining protein, MreB/Mrl family
YP_001636628.1	part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane
YP_001636629.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
YP_001636630.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit
YP_001636631.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
YP_001636632.1	PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: rca:Rcas_1268 H+transporting two-sector ATPase delta (OSCP) subunit
YP_001636633.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.
YP_001636634.1	TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: rrs:RoseRS_0517 ATP synthase F0, C subunit
YP_001636635.1	TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: rrs:RoseRS_0518 ATP synthase F0, A subunit
YP_001636636.1	PFAM: response regulator receiver; KEGG: rca:Rcas_1272 response regulator receiver protein
YP_001636637.1	KEGG: rrs:RoseRS_0521 hypothetical protein
YP_001636638.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rrs:RoseRS_4121 ErfK/YbiS/YcfS/YnhG family protein
YP_001636639.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: tte:TTE2131 NADH:flavin oxidoreductase, Old Yellow enzyme family
YP_001636640.1	KEGG: pvi:Cvib_1251 sodium ion-translocating decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit
YP_001636641.1	PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: rru:Rru_A0049 biotin/lipoyl attachment
YP_001636642.1	TIGRFAM: sodium pump decarboxylase, gamma subunit; PFAM: sodium pump decarboxylase gamma subunit
YP_001636643.1	PFAM: carboxyl transferase; KEGG: aba:Acid345_3025 carboxyl transferase
YP_001636644.1	PFAM: major facilitator superfamily MFS_1; KEGG: rsq:Rsph17025_3142 hypothetical protein
YP_001636645.1	KEGG: tel:tll1367 two-component hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001636646.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: hha:Hhal_0365 response regulator receiver modulated diguanylate cyclase
YP_001636647.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rxy:Rxyl_0089 ABC transporter related
YP_001636648.1	KEGG: aau:AAur_3049 putative ABC transporter, permease protein
YP_001636649.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
YP_001636650.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: dra:DR_1063 peptidyl-prolyl cis-trans isomerase C
YP_001636651.1	TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: rrs:RoseRS_1334 MazG family protein
YP_001636652.1	PFAM: protein of unknown function DUF951; KEGG: rrs:RoseRS_1335 protein of unknown function DUF951
YP_001636653.1	PFAM: protein of unknown function DUF107; KEGG: rrs:RoseRS_1336 protein of unknown function DUF107
YP_001636654.1	PFAM: band 7 protein; KEGG: rrs:RoseRS_1337 band 7 protein
YP_001636655.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: gsu:GSU0574 hypothetical protein
YP_001636656.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: rrs:RoseRS_0191 RNA polymerase, sigma 70 subunit, RpoD family
YP_001636657.1	KEGG: gtn:GTNG_2110 ATP-dependent DNA helicase; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease
YP_001636658.1	PFAM: SH3 type 3 domain protein; KEGG: rrs:RoseRS_0391 SH3, type 3 domain protein
YP_001636659.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: rca:Rcas_2042 GAF modulated sigma54 specific transcriptional regulator, Fis family
YP_001636660.1	PFAM: glycosyl hydrolase 53 domain protein; KEGG: rrs:RoseRS_1096 hypothetical protein
YP_001636661.1	TIGRFAM: glycogen synthase; PFAM: glycosyl transferase group 1; KEGG: sru:SRU_1930 glycosyl transferase
YP_001636662.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rrs:RoseRS_1054 lysine exporter protein (LysE/YggA)
YP_001636663.1	TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: rrs:RoseRS_3933 thiamine pyrophosphokinase
YP_001636664.1	TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; KEGG: rrs:RoseRS_3506 nucleotidyltransferase substrate binding protein, HI0074 family
YP_001636665.1	PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_3505 DNA polymerase, beta domain protein region
YP_001636666.1	KEGG: deb:DehaBAV1_0576 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein
YP_001636667.1	PFAM: TPR repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_1015 transcriptional regulator, SARP family
YP_001636668.1	KEGG: rca:Rcas_3348 PKD domain containing protein
YP_001636671.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: rca:Rcas_3221 response regulator receiver modulated diguanylate cyclase
YP_001636672.1	PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sth:STH1647 ATP-dependent RNA helicase
YP_001636673.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
YP_001636674.1	PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4606 glycosyl transferase, family 2
YP_001636675.1	converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines
YP_001636676.1	KEGG: mxa:MXAN_7111 hypothetical protein
YP_001636677.1	KEGG: rrs:RoseRS_1466 hypothetical protein
YP_001636678.1	KEGG: dge:Dgeo_1999 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_001636679.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mxa:MXAN_0865 oxidoreductase, short chain dehydrogenase/reductase family
YP_001636680.1	TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase; KEGG: tpe:Tpen_1241 sugar-phosphate isomerases, RpiB/LacA/LacB family
YP_001636681.1	PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: mag:amb1697 guanosine polyphosphate pyrophosphohydrolase/synthetase
YP_001636682.1	KEGG: rrs:RoseRS_1052 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase
YP_001636683.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: mxa:MXAN_3334 transporter, drug/metabolite exporter family
YP_001636684.1	KEGG: rca:Rcas_1478 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases
YP_001636685.1	KEGG: rca:Rcas_2788 hypothetical protein
YP_001636686.1	PFAM: SNARE associated Golgi protein; KEGG: par:Psyc_0191 possible alkaline phosphatase
YP_001636687.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sus:Acid_2880 multi-sensor signal transduction histidine kinase
YP_001636688.1	PFAM: NUDIX hydrolase; KEGG: bvu:BVU_3254 putative NUDIX/MutT family protein
YP_001636689.1	PFAM: putative methyltransferase; KEGG: rxy:Rxyl_2026 hypothetical protein
YP_001636690.1	PFAM: protein of unknown function UPF0153; KEGG: rrs:RoseRS_2875 protein of unknown function UPF0153
YP_001636691.1	KEGG: rca:Rcas_3342 hypothetical protein
YP_001636692.1	PFAM: LrgB family protein; KEGG: rrs:RoseRS_3283 LrgB family protein
YP_001636693.1	PFAM: LrgA family protein; KEGG: aeh:Mlg_0425 LrgA family protein
YP_001636694.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
YP_001636695.1	KEGG: noc:Noc_1740 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_001636696.1	KEGG: dar:Daro_3006 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001636697.1	TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: cth:Cthe_2996 intracellular protease, PfpI family
YP_001636698.1	PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_3544 von Willebrand factor, type A
YP_001636699.1	KEGG: rca:Rcas_1615 hypothetical protein
YP_001636700.1	PFAM: UvrD/REP helicase; KEGG: rca:Rcas_4063 UvrD/REP helicase
YP_001636701.1	KEGG: cme:CMH001C similar to hedgehog protein Pfam: Kelch_2 Kelch_1 Hint PROSITE: INTEIN_N_TER PRO_RICH THR_RICH
YP_001636702.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rca:Rcas_0988 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001636703.1	KEGG: dre:100006915 hypothetical protein LOC100006915
YP_001636704.1	PFAM: basic membrane lipoprotein; KEGG: rrs:RoseRS_1320 basic membrane lipoprotein
YP_001636705.1	PFAM: band 7 protein; KEGG: rca:Rcas_3371 band 7 protein
YP_001636706.1	PFAM: band 7 protein; KEGG: rca:Rcas_3370 band 7 protein
YP_001636707.1	TIGRFAM: prevent-host-death family protein
YP_001636708.1	PFAM: heat shock protein Hsp20; KEGG: rrs:RoseRS_0197 heat shock protein HSP20
YP_001636709.1	PFAM: dehydrogenase E1 component; KEGG: sus:Acid_0352 pyruvate dehydrogenase (acetyl-transferring)
YP_001636710.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: sus:Acid_0353 transketolase, central region
YP_001636711.1	PFAM: major facilitator superfamily MFS_1; KEGG: rca:Rcas_4313 major facilitator superfamily MFS_1
YP_001636712.1	KEGG: rrs:RoseRS_4543 shikimate kinase; PFAM: shikimate kinase; SMART: AAA ATPase
YP_001636713.1	KEGG: rca:Rcas_0920 ATPase AAA-2 domain protein; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_001636714.1	SMART: Helix-hairpin-helix DNA-binding class 1; KEGG: rca:Rcas_1691 competence protein ComEA helix-hairpin-helix repeat protein
YP_001636715.1	KEGG: rca:Rcas_1692 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta
YP_001636716.1	PFAM: periplasmic binding protein; KEGG: rxy:Rxyl_3164 periplasmic binding protein
YP_001636717.1	KEGG: rca:Rcas_3185 hypothetical protein
YP_001636718.1	PFAM: transposase IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4
YP_001636721.1	KEGG: mac:MA2043 hypothetical protein
YP_001636722.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_2504 drug resistance transporter, EmrB/QacA subfamily
YP_001636723.1	PFAM: Patatin; KEGG: pca:Pcar_2340 hypothetical protein
YP_001636724.1	KEGG: rca:Rcas_2374 hypothetical protein
YP_001636725.1	KEGG: rca:Rcas_2375 hypothetical protein
YP_001636726.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rca:Rcas_2376 transcriptional regulator, AraC family
YP_001636727.1	PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; KEGG: rca:Rcas_4327 ATP-dependent transcriptional regulator, MalT-like, LuxR family
YP_001636728.1	KEGG: bth:BT_1007 hypothetical protein
YP_001636729.1	PFAM: Abortive infection protein; KEGG: rca:Rcas_4225 abortive infection protein
YP_001636731.1	KEGG: bca:BCE_1912 hypothetical protein
YP_001636733.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rca:Rcas_4224 GCN5-related N-acetyltransferase
YP_001636734.1	PFAM: beta-lactamase; KEGG: mmr:Mmar10_2357 beta-lactamase
YP_001636735.1	KEGG: mem:Memar_0122 hypothetical protein
YP_001636736.1	TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: aba:Acid345_0224 aconitate hydratase 1
YP_001636737.1	catalyzes the formation of Mg-protoporphyrin IX from protoporphyrin IX and Mg(2+); first committed step of chlorophyll biosynthesis
YP_001636738.1	PFAM: extracellular solute-binding protein family 1; KEGG: tko:TK1771 ABC-type maltodextrin transport system, maltodextrin-binding periplasmic component
YP_001636739.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ade:Adeh_4135 ABC sugar transporter, inner membrane subunit
YP_001636740.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gka:GK0706 maltose/maltodextrin transport system (permease)
YP_001636741.1	KEGG: mxa:MXAN_7206 sensor histidine kinase/response regulator
YP_001636742.1	PFAM: putative esterase; KEGG: mmr:Mmar10_2741 putative esterase
YP_001636743.1	SMART: WD-40 repeat protein; KEGG: dge:Dgeo_2673 WD-40 repeat
YP_001636744.1	KEGG: vei:Veis_0626 conserved hypothetical cytosolic protein
YP_001636745.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: rrs:RoseRS_4321 SUA5/YciO/YrdC/YwlC family protein
YP_001636746.1	PFAM: phosphoenolpyruvate carboxylase; KEGG: rrs:RoseRS_2753 phosphoenolpyruvate carboxylase
YP_001636747.1	PFAM: Phosphoglycerate mutase; KEGG: mta:Moth_1105 phosphoglycerate/bisphosphoglycerate mutase
YP_001636748.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_4146 acyl-CoA dehydrogenase domain protein
YP_001636749.1	PFAM: alpha/beta hydrolase fold; Thioesterase; KEGG: drm:Dred_0353 alpha/beta hydrolase fold
YP_001636750.1	PFAM: transcriptional coactivator/pterin dehydratase; KEGG: rrs:RoseRS_0192 transcriptional coactivator/pterin dehydratase
YP_001636751.1	PFAM: DSBA oxidoreductase; KEGG: rca:Rcas_3717 DsbA oxidoreductase
YP_001636753.1	TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; KEGG: rca:Rcas_2025 DNA binding domain, excisionase family
YP_001636754.1	PFAM: nitroreductase; KEGG: mca:MCA1372 nitroreductase family protein
YP_001636755.1	PFAM: peptidase M41; AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_1848 AAA ATPase, central domain protein
YP_001636756.1	PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: rca:Rcas_3278 extracellular solute-binding protein family 3
YP_001636757.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sus:Acid_0071 two component transcriptional regulator, winged helix family
YP_001636758.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN3606 two-component sensor KdpD sensory kinase
YP_001636759.1	PFAM: amidohydrolase 2; KEGG: rsh:Rsph17029_1504 amidohydrolase 2
YP_001636760.1	PFAM: protein of unknown function DUF59; KEGG: fra:Francci3_2515 protein of unknown function DUF59
YP_001636761.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_2799 putative zinc-containing alcohol dehydrogenase
YP_001636762.1	KEGG: rca:Rcas_0930 hypothetical protein
YP_001636763.1	PFAM: Thrombospondin type 3 repeat; Cna B domain protein; KEGG: rrs:RoseRS_4292 Cna B domain protein
YP_001636764.1	PFAM: protein of unknown function DUF58; KEGG: rrs:RoseRS_3160 protein of unknown function DUF58
YP_001636766.1	amylomaltase; acts to release glucose from maltodextrins
YP_001636767.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: rrs:RoseRS_3157 RNA polymerase, sigma 70 subunit, RpoD family
YP_001636768.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: eba:ebA5457 3-ketoacyl-(acyl-carrier-protein) reductase
YP_001636769.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-4 domain protein; KEGG: rca:Rcas_2373 putative PAS/PAC sensor protein
YP_001636770.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: vei:Veis_1704 2-hydroxy-3-oxopropionate reductase
YP_001636771.1	PFAM: oxidoreductase domain protein; SAF domain protein; KEGG: mpt:Mpe_A3249 hypothetical protein
YP_001636772.1	KEGG: rrs:RoseRS_2701 hypothetical protein
YP_001636773.1	KEGG: rrs:RoseRS_2702 hypothetical protein
YP_001636774.1	PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_2703 hypothetical protein
YP_001636775.1	PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_2704 von Willebrand factor, type A
YP_001636776.1	PFAM: beta-lactamase; KEGG: rrs:RoseRS_2362 beta-lactamase
YP_001636777.1	PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: rba:RB10350 hypothetical protein
YP_001636778.1	PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_0145 NUDIX hydrolase
YP_001636779.1	KEGG: dps:DP1060 probable glucokinase; TIGRFAM: glucokinase; PFAM: Glucokinase
YP_001636780.1	PFAM: ribulose-phosphate 3-epimerase; KEGG: smd:Smed_3927 ribulose-phosphate 3-epimerase
YP_001636781.1	KEGG: mxa:MXAN_5489 ribose-5-phosphate isomerase; TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase
YP_001636782.1	PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: rrs:RoseRS_3082 peptidase M61 domain protein
YP_001636783.1	KEGG: rca:Rcas_2174 uncharacterized component of anaerobic dehydrogenase-like protein
YP_001636784.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rca:Rcas_2173 nitrate reductase
YP_001636785.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Polysulphide reductase NrfD; KEGG: rca:Rcas_2172 cyclic nucleotide-binding protein
YP_001636787.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rrs:RoseRS_1791 transcriptional regulator, LysR family
YP_001636788.1	PFAM: protein of unknown function DUF427; KEGG: rca:Rcas_1854 protein of unknown function DUF427
YP_001636789.1	TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: rrs:RoseRS_4590 DNA protecting protein DprA
YP_001636790.1	PFAM: NUDIX hydrolase; KEGG: rca:Rcas_0219 NUDIX hydrolase
YP_001636791.1	KEGG: eli:ELI_10575 hypothetical protein
YP_001636792.1	KEGG: mac:MA2043 hypothetical protein
YP_001636794.1	KEGG: psp:PSPPH_2283 hypothetical protein
YP_001636795.1	KEGG: rrs:RoseRS_1689 YD repeat-containing protein
YP_001636799.1	PFAM: YD repeat-containing protein; KEGG: rrs:RoseRS_1682 YD repeat protein
YP_001636800.1	KEGG: rrs:RoseRS_2969 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase
YP_001636801.1	PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: rca:Rcas_1887 3-hydroxyacyl-CoA dehydrogenase NAD-binding
YP_001636802.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rca:Rcas_0838 transcriptional regulator, BadM/Rrf2 family
YP_001636803.1	KEGG: rrs:RoseRS_4486 hypothetical protein
YP_001636804.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: rrs:RoseRS_4485 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_001636805.1	KEGG: rca:Rcas_0706 DNA polymerase, beta domain protein region
YP_001636806.1	PFAM: HEPN domain protein; KEGG: rca:Rcas_0705 HEPN domain protein
YP_001636807.1	KEGG: rrs:RoseRS_0193 hypothetical protein
YP_001636808.1	PFAM: chromosome segregation and condensation protein ScpA; KEGG: rrs:RoseRS_0194 chromosome segregation and condensation protein ScpA
YP_001636809.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: sth:STH493 two-component sensor histidine kinase
YP_001636810.1	PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; Sigma-70 region 4 type 2; KEGG: rxy:Rxyl_2809 two component transcriptional regulator, LuxR family
YP_001636811.1	PFAM: beta-lactamase domain protein; KEGG: rca:Rcas_1162 beta-lactamase domain protein
YP_001636812.1	KEGG: pvi:Cvib_0467 hypothetical protein
YP_001636813.1	KEGG: rca:Rcas_3917 hypothetical protein
YP_001636815.1	SMART: extracellular solute-binding protein family 3; KEGG: rrs:RoseRS_4005 extracellular solute-binding protein, family 3
YP_001636816.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4004 polar amino acid ABC transporter, inner membrane subunit
YP_001636817.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rca:Rcas_1456 polar amino acid ABC transporter, inner membrane subunit
YP_001636818.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cyb:CYB_0933 polar amino amino acid ABC transporter (PAAT) family, ATP-binding protein
YP_001636819.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_4294 glycosyl transferase group 1
YP_001636821.1	PFAM: protein of unknown function DUF583; KEGG: rca:Rcas_1331 protein of unknown function DUF583
YP_001636822.1	PFAM: Septum formation initiator; KEGG: rrs:RoseRS_3684 septum formation initiator
YP_001636823.1	KEGG: rca:Rcas_2730 adenylate/guanylate cyclase with TPR repeats
YP_001636824.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: rrs:RoseRS_4592 pseudouridine synthase
YP_001636825.1	PFAM: blue (type 1) copper domain protein; KEGG: rca:Rcas_3112 blue (type 1) copper domain protein
YP_001636826.1	PFAM: peptidase C60 sortase A and B; KEGG: rrs:RoseRS_3119 peptidase C60, sortase A and B
YP_001636827.1	TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR
YP_001636828.1	PFAM: protein of unknown function DUF343; Methyltransferase type 11; Methyltransferase type 12; KEGG: rle:RL0814 hypothetical protein
YP_001636829.1	KEGG: rca:Rcas_4272 hypothetical protein
YP_001636830.1	PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3583 glycosyl transferase, group 1
YP_001636831.1	PFAM: conserved hypothetical protein; KEGG: rca:Rcas_4270 hypothetical protein
YP_001636832.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: rca:Rcas_4269 NAD-dependent epimerase/dehydratase
YP_001636833.1	PFAM: O-antigen polymerase; KEGG: rca:Rcas_4268 O-antigen polymerase
YP_001636834.1	KEGG: rrs:RoseRS_3578 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase
YP_001636835.1	PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: rca:Rcas_1903 glutamate synthase (ferredoxin)
YP_001636837.1	PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: rrs:RoseRS_1646 chaperone DnaJ domain protein
YP_001636838.1	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: rrs:RoseRS_0843 5'-nucleotidase domain protein
YP_001636839.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_4552 short-chain dehydrogenase/reductase SDR
YP_001636840.1	PFAM: alpha/beta hydrolase fold; KEGG: rca:Rcas_0105 alpha/beta hydrolase fold
YP_001636841.1	KEGG: rrs:RoseRS_4554 hypothetical protein
YP_001636842.1	PFAM: Abortive infection protein; KEGG: btl:BALH_2161 CAAX amino terminal protease family protein
YP_001636843.1	PFAM: regulatory protein ArsR; KEGG: pth:PTH_1500 predicted transcriptional regulator
YP_001636844.1	PFAM: protein of unknown function DUF1648; KEGG: ckl:CKL_2435 hypothetical protein
YP_001636845.1	PFAM: Abortive infection protein; KEGG: sen:SACE_6350 hypothetical protein
YP_001636846.1	KEGG: mbn:Mboo_0664 hypothetical protein
YP_001636847.1	PFAM: peptidase M4 thermolysin; peptidase domain protein; Peptidase M4 thermolysin; KEGG: bsu:BG10691 extracellular neutral protease B
YP_001636848.1	PFAM: MscS Mechanosensitive ion channel; KEGG: gsu:GSU2357 hypothetical protein
YP_001636849.1	PFAM: protein of unknown function DUF445; KEGG: sma:SAV5185 hypothetical protein
YP_001636850.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: rrs:RoseRS_4038 cystathionine gamma-synthase
YP_001636851.1	KEGG: sfu:Sfum_0942 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein
YP_001636852.1	PFAM: KaiB domain protein; KEGG: rca:Rcas_4149 KaiB domain protein
YP_001636853.1	acts as a promotor non-specific transcription repressor
YP_001636854.1	KEGG: syn:slr0359 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein
YP_001636855.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: plt:Plut_0413 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001636856.1	KEGG: rca:Rcas_0926 ATPase involved in chromosome partitioning-like protein
YP_001636857.1	PFAM: Formiminotransferase-cyclodeaminase; KEGG: rrs:RoseRS_4575 formiminotransferase-cyclodeaminase
YP_001636858.1	PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: rca:Rcas_0735 methenyltetrahydrofolate cyclohydrolase
YP_001636859.1	PFAM: phosphoribosylglycinamide synthetase; KEGG: rca:Rcas_0551 phosphoribosylamine--glycine ligase
YP_001636860.1	PFAM: GCN5-related N-acetyltransferase; KEGG: azo:azo3635 conserved hypothetical acetyltransferase
YP_001636861.1	TIGRFAM: poly(hydroxyalkanoate) granule-associated protein; PFAM: poly granule associated family protein; KEGG: rca:Rcas_0741 hypothetical protein
YP_001636862.1	PFAM: PHA accumulation regulator DNA-binding protein; KEGG: rrs:RoseRS_2163 PHA accumulation regulator DNA-binding protein
YP_001636863.1	PFAM: Patatin; KEGG: rrs:RoseRS_2164 patatin
YP_001636864.1	KEGG: rca:Rcas_2473 glycosyl transferase group 1
YP_001636865.1	PFAM: WD-40 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rca:Rcas_2288 serine/threonine protein kinase
YP_001636866.1	anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate
YP_001636867.1	sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters
YP_001636868.1	TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit; PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rca:Rcas_4111 FAD dependent oxidoreductase
YP_001636869.1	TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: rrs:RoseRS_1768 glycerol kinase
YP_001636870.1	TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: rrs:RoseRS_3298 dihydroxyacetone kinase, L subunit
YP_001636871.1	with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase
YP_001636872.1	PFAM: major intrinsic protein; KEGG: rca:Rcas_2043 MIP family channel protein
YP_001636873.1	KEGG: rca:Rcas_3939 alpha-2-macroglobulin domain protein
YP_001636874.1	KEGG: rca:Rcas_3939 alpha-2-macroglobulin domain protein
YP_001636875.1	PFAM: aminoglycoside phosphotransferase; KEGG: rrs:RoseRS_1892 aminoglycoside phosphotransferase
YP_001636876.1	PFAM: sugar fermentation stimulation protein; KEGG: mta:Moth_0431 sugar fermentation stimulation protein
YP_001636877.1	PFAM: lipolytic protein G-D-S-L family; KEGG: sus:Acid_3990 lipolytic enzyme, G-D-S-L family
YP_001636878.1	PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_1063 major facilitator superfamily MFS_1
YP_001636879.1	PFAM: luciferase family protein; KEGG: rxy:Rxyl_0282 luciferase-like protein
YP_001636880.1	PFAM: AIG2 family protein; KEGG: sma:SAV5670 hypothetical protein
YP_001636881.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rrs:RoseRS_2741 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_001636882.1	PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: rrs:RoseRS_2742 agmatine deiminase
YP_001636884.1	PFAM: protein of unknown function DUF1501; KEGG: rrs:RoseRS_2158 protein of unknown function DUF1501
YP_001636885.1	PFAM: Protein of unknown function DUF1800; KEGG: rrs:RoseRS_2159 hypothetical protein
YP_001636886.1	PFAM: Shikimate/quinate 5-dehydrogenase; KEGG: rca:Rcas_1617 shikimate/quinate 5-dehydrogenase
YP_001636887.1	PFAM: alpha/beta hydrolase fold; KEGG: mva:Mvan_2148 alpha/beta hydrolase fold
YP_001636888.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cyb:CYB_1441 ABC transporter, ATP-binding protein
YP_001636889.1	PFAM: protein of unknown function DUF990; KEGG: gka:GK1488 ABC-2 type transport system permease protein
YP_001636890.1	PFAM: protein of unknown function DUF990; KEGG: gtn:GTNG_1335 conserved membrane protein, multidrug efflux associated
YP_001636891.1	PFAM: thioesterase superfamily protein; KEGG: dar:Daro_1078 thioesterase superfamily
YP_001636892.1	PFAM: thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; Tellurite resistance methyltransferase, TehB, core; KEGG: rca:Rcas_2568 methyltransferase type 11
YP_001636893.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
YP_001636894.1	PFAM: O-antigen polymerase; KEGG: rrs:RoseRS_4391 O-antigen polymerase
YP_001636895.1	type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese
YP_001636896.1	KEGG: gvi:gll3649 hypothetical protein
YP_001636897.1	PFAM: Inorganic pyrophosphatase; KEGG: rca:Rcas_3708 inorganic diphosphatase
YP_001636898.1	PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_3219 NUDIX hydrolase
YP_001636899.1	PFAM: protein of unknown function UPF0054; KEGG: rrs:RoseRS_3596 protein of unknown function UPF0054
YP_001636900.1	KEGG: rca:Rcas_0149 hypothetical protein
YP_001636901.1	KEGG: hhe:HH0947 hypothetical protein
YP_001636902.1	KEGG: pna:Pnap_3931 hypothetical protein
YP_001636903.1	PFAM: putative RNA methylase; THUMP domain protein; Methyltransferase type 11; KEGG: rca:Rcas_2582 putative RNA methylase
YP_001636904.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rrs:RoseRS_1704 peptidase M20
YP_001636905.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: fal:FRAAL2907 putative short chain dehydrogenase/reductase
YP_001636906.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_001636907.1	PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: rrs:RoseRS_1528 PBS lyase heat domain protein repeat-containing protein
YP_001636908.1	KEGG: rrs:RoseRS_2661 hypothetical protein
YP_001636909.1	PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_2662 adenylyl cyclase class-3/4/guanylyl cyclase
YP_001636910.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rca:Rcas_3579 radical SAM domain protein
YP_001636911.1	PFAM: Aldehyde Dehydrogenase_; KEGG: rrs:RoseRS_0265 aldehyde dehydrogenase (NAD(+))
YP_001636912.1	KEGG: slo:Shew_3721 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase
YP_001636913.1	PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: rxy:Rxyl_1091 homoserine dehydrogenase
YP_001636914.1	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides
YP_001636915.1	KEGG: rca:Rcas_4097 hypothetical protein
YP_001636916.1	KEGG: rca:Rcas_3671 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001636917.1	PFAM: OsmC family protein; KEGG: rca:Rcas_0206 OsmC family protein
YP_001636918.1	PFAM: cyclase family protein; KEGG: rrs:RoseRS_1211 cyclase family protein
YP_001636919.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: sth:STH1254 hypothetical protein
YP_001636920.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; Shikimate/quinate 5-dehydrogenase; KEGG: rrs:RoseRS_3990 6-phosphogluconate dehydrogenase, NAD-binding
YP_001636921.1	KEGG: rca:Rcas_1947 hypothetical protein
YP_001636922.1	PFAM: GCN5-related N-acetyltransferase; KEGG: aae:aq_1359 hypothetical protein
YP_001636923.1	catalyzes the formation of arginine from (N-L-arginino)succinate
YP_001636925.1	KEGG: rrs:RoseRS_4059 arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ
YP_001636926.1	PFAM: Phosphoglycerate mutase; KEGG: rrs:RoseRS_0245 phosphoglycerate mutase
YP_001636927.1	KEGG: rca:Rcas_2236 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase
YP_001636928.1	KEGG: maq:Maqu_1317 hypothetical protein
YP_001636929.1	PFAM: creatinase; peptidase M24; KEGG: rrs:RoseRS_4628 peptidase M24
YP_001636930.1	KEGG: rrs:RoseRS_0328 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein
YP_001636931.1	PFAM: Forkhead-associated protein; KEGG: rca:Rcas_3047 FHA domain containing protein
YP_001636932.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: rca:Rcas_2276 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001636933.1	KEGG: rca:Rcas_3204 hypothetical protein
YP_001636934.1	PFAM: inositol monophosphatase; KEGG: rrs:RoseRS_1153 inositol-phosphate phosphatase
YP_001636936.1	PFAM: aminotransferase class-III; KEGG: rca:Rcas_0117 aminotransferase class-III
YP_001636937.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rca:Rcas_0119 hypothetical protein
YP_001636938.1	KEGG: vvy:VV1137 hypothetical protein
YP_001636939.1	KEGG: rrs:RoseRS_2622 phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein; AIR synthase related protein domain protein
YP_001636940.1	KEGG: rrs:RoseRS_2621 hypothetical protein
YP_001636941.1	KEGG: rrs:RoseRS_2620 hypothetical protein
YP_001636942.1	leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys
YP_001636943.1	KEGG: rca:Rcas_3947 hypothetical protein
YP_001636945.1	KEGG: cte:CT1295 magnesium-protoporphyrin methyltransferase; TIGRFAM: magnesium chelatase, H subunit; PFAM: CobN/magnesium chelatase
YP_001636946.1	PFAM: regulatory protein MarR; KEGG: rpa:RPA1031 transcriptional regulator, MarR family; N-acetyltransferase
YP_001636947.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: dge:Dgeo_1147 drug resistance transporter EmrB/QacA subfamily
YP_001636948.1	KEGG: rrs:RoseRS_3020 transcriptional regulator-like protein
YP_001636949.1	SMART: serine/threonine protein kinase; KEGG: afw:Anae109_4064 protein kinase
YP_001636951.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rxy:Rxyl_2629 two component transcriptional regulator, LuxR family
YP_001636952.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; KEGG: rca:Rcas_0805 multi-sensor signal transduction histidine kinase
YP_001636953.1	KEGG: rrs:RoseRS_0370 hypothetical protein
YP_001636954.1	TIGRFAM: CRISPR-associated protein, TIGR02710 family; PFAM: CRISPR-associated protein Cas02710; KEGG: rrs:RoseRS_3021 hypothetical protein
YP_001636955.1	KEGG: rrs:RoseRS_3020 transcriptional regulator-like protein
YP_001636956.1	KEGG: rca:Rcas_2682 hypothetical protein
YP_001636957.1	KEGG: rrs:RoseRS_3014 hypothetical protein
YP_001636958.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: rca:Rcas_2677 RNA-directed DNA polymerase (reverse transcriptase)
YP_001636959.1	TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: rca:Rcas_2676 CRISPR-associated protein Cas1
YP_001636960.1	TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: rca:Rcas_2674 CRISPR-associated protein Cas2
YP_001636961.1	KEGG: rrs:RoseRS_2546 hypothetical protein
YP_001636962.1	KEGG: sat:SYN_00188 TolB protein
YP_001636963.1	PFAM: heat shock protein DnaJ domain protein; KEGG: rca:Rcas_0258 heat shock protein DnaJ domain protein
YP_001636964.1	PFAM: protein of unknown function DUF55; KEGG: rca:Rcas_2368 protein of unknown function DUF55
YP_001636965.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rca:Rcas_0353 two component transcriptional regulator, winged helix family
YP_001636966.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rca:Rcas_0352 integral membrane sensor signal transduction histidine kinase
YP_001636967.1	TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: rrs:RoseRS_0112 Na+/solute symporter
YP_001636968.1	AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase
YP_001636969.1	KEGG: rrs:RoseRS_1047 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp
YP_001636970.1	TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: xcv:XCV3180 hemolysin-III family membrane protein
YP_001636971.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: rrs:RoseRS_0664 peptidase S8 and S53, subtilisin, kexin, sedolisin
YP_001636975.1	PFAM: regulatory protein TetR; KEGG: rrs:RoseRS_4304 transcriptional regulator, TetR family
YP_001636976.1	PFAM: secretion protein HlyD family protein; KEGG: rca:Rcas_0268 efflux transporter, RND family, MFP subunit
YP_001636977.1	PFAM: acriflavin resistance protein; KEGG: rrs:RoseRS_4303 acriflavin resistance protein
YP_001636978.1	KEGG: rrs:RoseRS_1832 hypothetical protein
YP_001636979.1	KEGG: rca:Rcas_2511 hypothetical protein
YP_001636980.1	KEGG: rca:Rcas_2510 hypothetical protein
YP_001636981.1	TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: rrs:RoseRS_4053 acetylglutamate kinase
YP_001636982.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rca:Rcas_0291 transcriptional regulator, Crp/Fnr family
YP_001636983.1	TIGRFAM: conserved hypothetical membrane protein; SMART: von Willebrand factor type A; KEGG: rrs:RoseRS_1890 hypothetical protein
YP_001636984.1	PFAM: protein of unknown function DUF402; KEGG: rrs:RoseRS_0508 protein of unknown function DUF402
YP_001636985.1	PFAM: protein of unknown function DUF58; KEGG: rrs:RoseRS_1889 protein of unknown function DUF58
YP_001636986.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: rrs:RoseRS_1888 ATPase associated with various cellular activities, AAA_3
YP_001636987.1	KEGG: rrs:RoseRS_1886 hypothetical protein
YP_001636988.1	KEGG: rrs:RoseRS_1885 hypothetical protein
YP_001636989.1	KEGG: rrs:RoseRS_0127 hypothetical protein
YP_001636990.1	PFAM: TPR repeat-containing protein; NB-ARC domain protein; peptidase C14 caspase catalytic subunit p20; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0641 tetratricopeptide TPR_2 repeat protein
YP_001636991.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: rca:Rcas_3258 sec-independent protein translocase, TatC subunit
YP_001636992.1	PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: rrs:RoseRS_0983 sec-independent translocation protein MttA/Hcf106
YP_001636993.1	carries the fatty acid chain in fatty acid biosynthesis
YP_001636994.1	TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: rrs:RoseRS_0985 NusB antitermination factor
YP_001636995.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rrs:RoseRS_3203 acetyl-CoA carboxylase, biotin carboxylase
YP_001636996.1	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rca:Rcas_3253 3-oxoacyl-(acyl-carrier-protein) reductase
YP_001636997.1	KEGG: rrs:RoseRS_0988 restriction endonuclease
YP_001636998.1	PFAM: ATP-cone domain protein; KEGG: rca:Rcas_3251 ATP-cone domain protein
YP_001636999.1	PFAM: Ppx/GppA phosphatase; KEGG: rrs:RoseRS_0819 Ppx/GppA phosphatase
YP_001637000.1	PFAM: UbiA prenyltransferase; KEGG: mem:Memar_2408 UbiA prenyltransferase
YP_001637001.1	phytyltransferase acting specifically in the tocopherol biosynthetic pathway; member of the UbiA prenyltransferase family which catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin
YP_001637002.1	PFAM: CBS domain containing protein; KEGG: dvl:Dvul_0535 CBS domain containing protein
YP_001637003.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_0456 integral membrane sensor signal transduction histidine kinase
YP_001637004.1	PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: rrs:RoseRS_0455 protein of unknown function DUF418
YP_001637005.1	PFAM: regulatory protein LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_0454 two component transcriptional regulator, LuxR family
YP_001637006.1	KEGG: rrs:RoseRS_3692 sodium ion-translocating decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit
YP_001637007.1	PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: pho:PH1284 methylmalonyl-CoA decarboxylase gamma chain
YP_001637008.1	PFAM: sodium pump decarboxylase gamma subunit
YP_001637009.1	PFAM: carboxyl transferase; KEGG: rrs:RoseRS_3291 carboxyl transferase
YP_001637010.1	PFAM: Abortive infection protein; KEGG: dsy:DSY3814 hypothetical protein
YP_001637011.1	PFAM: histone deacetylase superfamily; KEGG: rrs:RoseRS_3805 histone deacetylase superfamily
YP_001637012.1	PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: rrs:RoseRS_1374 GHMP kinase
YP_001637013.1	KEGG: rca:Rcas_3885 hypothetical protein
YP_001637014.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_0849 methyltransferase type 11
YP_001637015.1	KEGG: rrs:RoseRS_0848 hypothetical protein
YP_001637016.1	KEGG: rrs:RoseRS_4300 hypothetical protein
YP_001637017.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_3891 glycosyl transferase group 1
YP_001637018.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_3892 glycosyl transferase group 1
YP_001637019.1	PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: mxa:MXAN_2260 potassium efflux system family protein
YP_001637020.1	PFAM: glycoside hydrolase family 35; Glycoside hydrolase family 42 domain protein; KEGG: cmi:CMM_2700 putative beta-galactosidase
YP_001637021.1	PFAM: glycoside hydrolase family 31; KEGG: olu:OSTLU_38421 predicted protein
YP_001637022.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rrs:RoseRS_0524 alanine racemase
YP_001637023.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_0525 ABC transporter related
YP_001637024.1	KEGG: ana:alr4818 similar to Bpu10I restriction endonuclease beta subunit
YP_001637025.1	KEGG: mes:Meso_3799 putative RNA methylase
YP_001637026.1	KEGG: rrs:RoseRS_4052 N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region
YP_001637027.1	KEGG: azo:azo2287 conserved hypothetical protein
YP_001637028.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0641 tetratricopeptide TPR_2 repeat protein
YP_001637029.1	KEGG: ani:AN8545.2 hypothetical protein Pfam: PNP_UDP_1 NB-ARC NACHT AAA TPR_1 TPR_4 TPR_2 PROSITE: TPR
YP_001637030.1	KEGG: reu:Reut_A2011 hypothetical protein
YP_001637032.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_1936 anti-sigma-factor antagonist
YP_001637033.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; histidine kinase HAMP region domain protein; KEGG: rca:Rcas_3858 anti-sigma-factor antagonist
YP_001637034.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
YP_001637035.1	PFAM: response regulator receiver; KEGG: rrs:RoseRS_3162 response regulator receiver protein
YP_001637036.1	TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: rca:Rcas_3787 ATP--cobalamin adenosyltransferase
YP_001637037.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rrs:RoseRS_1483 cation diffusion facilitator family transporter
YP_001637038.1	TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); KEGG: tfu:Tfu_0389 methionyl-tRNA synthetase, class Ia
YP_001637039.1	KEGG: sth:STH2407 hypothetical protein
YP_001637040.1	PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: rca:Rcas_0841 molybdopterin dehydrogenase FAD-binding
YP_001637041.1	PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rca:Rcas_0842 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding
YP_001637042.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rrs:RoseRS_0340 (2Fe-2S)-binding domain protein
YP_001637043.1	PFAM: carbon monoxide dehydrogenase subunit G; KEGG: rrs:RoseRS_0339 carbon monoxide dehydrogenase subunit G
YP_001637044.1	KEGG: rrs:RoseRS_1758 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein
YP_001637045.1	KEGG: rca:Rcas_2039 homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold
YP_001637046.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_3876 multi-sensor hybrid histidine kinase
YP_001637047.1	PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bcy:Bcer98_2119 YbaK/EbsC protein
YP_001637048.1	PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_0780 glycosyl transferase, group 1
YP_001637049.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: gur:Gura_3810 methyltransferase type 11
YP_001637050.1	PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: rca:Rcas_3881 hypothetical protein
YP_001637051.1	PFAM: ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_0187 ATPase AAA-2 domain protein
YP_001637053.1	KEGG: rca:Rcas_0303 transcriptional regulator, TrmB
YP_001637054.1	TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: rca:Rcas_0304 FeS assembly ATPase SufC
YP_001637055.1	TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: rca:Rcas_0305 FeS assembly protein SufD
YP_001637056.1	TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rrs:RoseRS_0710 cysteine desulfurase, SufS subfamily
YP_001637057.1	TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: rca:Rcas_0307 SUF system FeS assembly protein, NifU family
YP_001637058.1	TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: rrs:RoseRS_0712 FeS assembly protein SufB
YP_001637059.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: rrs:RoseRS_0716 Rieske (2Fe-2S) domain protein
YP_001637060.1	PFAM: Rhodanese domain protein; KEGG: rca:Rcas_0312 rhodanese domain protein
YP_001637061.1	PFAM: nitrogen-fixing NifU domain protein; KEGG: rca:Rcas_0314 SUF system FeS assembly protein, NifU family
YP_001637062.1	TIGRFAM: cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rrs:RoseRS_0720 cysteine synthase
YP_001637063.1	SMART: Mov34/MPN/PAD-1 family protein; KEGG: rca:Rcas_0316 Mov34/MPN/PAD-1 family protein
YP_001637064.1	PFAM: thiamineS protein; KEGG: rrs:RoseRS_0722 thiamineS protein
YP_001637065.1	PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein; KEGG: rca:Rcas_0318 UBA/ThiF-type NAD/FAD binding protein
YP_001637066.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mxa:MXAN_6492 oxidoreductase, Gfo/Idh/MocA family
YP_001637067.1	PFAM: regulatory protein ArsR; KEGG: rrs:RoseRS_2664 regulatory protein, ArsR
YP_001637068.1	PFAM: DNA polymerase beta domain protein region; KEGG: tme:Tmel_1694 DNA polymerase, beta domain protein region
YP_001637069.1	KEGG: rrs:RoseRS_2083 hypothetical protein
YP_001637070.1	TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: rca:Rcas_2285 glycine cleavage system T protein
YP_001637071.1	TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: rrs:RoseRS_1525 glycine cleavage system H protein
YP_001637072.1	PFAM: glycine cleavage system P-protein; KEGG: rca:Rcas_2283 glycine dehydrogenase (decarboxylating)
YP_001637073.1	PFAM: aminoglycoside phosphotransferase; KEGG: rrs:RoseRS_1523 hypothetical protein
YP_001637074.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein
YP_001637075.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: mpt:Mpe_A0484 acyltransferase, putative
YP_001637076.1	TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: sus:Acid_3206 PAS/PAC sensor hybrid histidine kinase
YP_001637077.1	SMART: LamG domain protein jellyroll fold domain protein; KEGG: rca:Rcas_2574 LamG domain protein jellyroll fold domain protein
YP_001637078.1	PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: rca:Rcas_4411 deoxyribodipyrimidine photo-lyase
YP_001637079.1	KEGG: rrs:RoseRS_2746 hypothetical protein
YP_001637080.1	KEGG: rca:Rcas_1697 peptidase M9A collagenase domain protein
YP_001637081.1	KEGG: rrs:RoseRS_1019 hypothetical protein
YP_001637082.1	PFAM: DNA polymerase beta domain protein region; KEGG: gur:Gura_4165 DNA polymerase, beta domain protein region
YP_001637083.1	PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_0074 DNA polymerase, beta domain protein region
YP_001637084.1	PFAM: peptidase T2 asparaginase 2; KEGG: rrs:RoseRS_0104 asparaginase
YP_001637085.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rca:Rcas_2058 major facilitator superfamily MFS_1
YP_001637086.1	PFAM: regulatory protein TetR; KEGG: dra:DR_2148 transcriptional regulator, TetR family
YP_001637087.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: xcv:XCV2971 putative sensor protein
YP_001637088.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rca:Rcas_0446 cobyrinic acid ac-diamide synthase
YP_001637089.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rca:Rcas_0373 anti-sigma-factor antagonist
YP_001637090.1	KEGG: rca:Rcas_0261 hypothetical protein
YP_001637091.1	KEGG: rca:Rcas_0262 hypothetical protein
YP_001637092.1	KEGG: rrs:RoseRS_0257 hypothetical protein
YP_001637093.1	PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mxa:MXAN_3956 putative adenylate cyclase
YP_001637094.1	KEGG: rca:Rcas_0225 hypothetical protein
YP_001637095.1	PFAM: ApbE family lipoprotein; KEGG: rrs:RoseRS_0609 ApbE family lipoprotein
YP_001637096.1	KEGG: rca:Rcas_0227 hypothetical protein
YP_001637097.1	PFAM: Propeptide PepSY amd peptidase M4; KEGG: rca:Rcas_0228 propeptide PepSY amd peptidase M4
YP_001637098.1	KEGG: rca:Rcas_0224 hypothetical protein
YP_001637099.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rca:Rcas_0229 two component transcriptional regulator, winged helix family
YP_001637100.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rca:Rcas_0230 integral membrane sensor signal transduction histidine kinase
YP_001637101.1	KEGG: stp:Strop_2001 alpha-amylase; PFAM: glycoside hydrolase starch-binding; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain
YP_001637102.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_001637103.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: ppd:Ppro_3118 3-beta hydroxysteroid dehydrogenase/isomerase
YP_001637104.1	Catalyzes the specific recognition and activation of amino acids during peptide synthesis
YP_001637105.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: rca:Rcas_2641 oligopeptidase B
YP_001637106.1	PFAM: alpha/beta hydrolase fold; KEGG: dps:DP2632 similar to haloalkane dehalogenase
YP_001637107.1	KEGG: ava:Ava_2710 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001637108.1	PFAM: response regulator receiver; KEGG: noc:Noc_2451 response regulator receiver
YP_001637109.1	KEGG: rrs:RoseRS_3061 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001637110.1	KEGG: rrs:RoseRS_0605 hypothetical protein
YP_001637111.1	KEGG: rca:Rcas_4062 hypothetical protein
YP_001637112.1	TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: rrs:RoseRS_2408 magnesium and cobalt transport protein CorA
YP_001637113.1	KEGG: rca:Rcas_3039 hypothetical protein
YP_001637114.1	KEGG: rba:RB3075 hypothetical protein
YP_001637115.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_0135 anti-sigma-factor antagonist
YP_001637116.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_0221 anti-sigma-factor antagonist
YP_001637117.1	catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis
YP_001637118.1	KEGG: rca:Rcas_3858 anti-sigma-factor antagonist
YP_001637119.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: rrs:RoseRS_2299 electron transfer flavoprotein beta-subunit
YP_001637120.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: rrs:RoseRS_2298 electron transfer flavoprotein, alpha subunit
YP_001637121.1	PFAM: NHL repeat containing protein; KEGG: mfa:Mfla_1033 L-sorbosone dehydrogenase, putative
YP_001637122.1	PFAM: protein of unknown function DUF540; KEGG: rrs:RoseRS_3441 protein of unknown function DUF540
YP_001637123.1	PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3594 glycosyl transferase, group 1
YP_001637124.1	KEGG: cya:CYA_0302 hypothetical protein
YP_001637125.1	KEGG: rxy:Rxyl_2987 hypothetical protein
YP_001637126.1	KEGG: rrs:RoseRS_0305 hypothetical protein
YP_001637127.1	PFAM: protein of unknown function DUF1130; KEGG: rrs:RoseRS_0304 protein of unknown function DUF1130
YP_001637128.1	PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_0377 glycosyl transferase family 2
YP_001637129.1	PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: rrs:RoseRS_1740 glycoside hydrolase family 2, sugar binding
YP_001637130.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rxy:Rxyl_0375 acyl-CoA dehydrogenase-like protein
YP_001637131.1	KEGG: art:Arth_2330 hypothetical protein
YP_001637133.1	KEGG: rrs:RoseRS_2127 uncharacterized metal-binding protein-like protein
YP_001637134.1	PFAM: AAA-4 family protein; KEGG: rca:Rcas_1744 putative transcriptional regulator
YP_001637135.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: sth:STH1607 tRNA/rRNA methyltransferase
YP_001637136.1	PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_1572 major facilitator superfamily MFS_1
YP_001637137.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rca:Rcas_1036 redoxin domain protein
YP_001637138.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
YP_001637139.1	PFAM: ubiquitin-associated- domain-containing protein; Translation elongation factor EFTs/EF1B dimerisation; KEGG: rca:Rcas_3926 translation elongation factor Ts
YP_001637140.1	Catalyzes the phosphorylation of UMP to UDP
YP_001637141.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
YP_001637142.1	KEGG: rrs:RoseRS_2015 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase
YP_001637143.1	PFAM: phosphatidate cytidylyltransferase; KEGG: rrs:RoseRS_2014 phosphatidate cytidylyltransferase
YP_001637144.1	KEGG: stp:Strop_3558 hypothetical protein
YP_001637145.1	PFAM: alpha-L-rhamnosidase; KEGG: art:Arth_1969 alpha-L-rhamnosidase
YP_001637146.1	KEGG: rca:Rcas_3314 hypothetical protein
YP_001637147.1	PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; KEGG: rca:Rcas_1818 peptidase M50
YP_001637148.1	KEGG: rrs:RoseRS_2602 hypothetical protein
YP_001637149.1	PFAM: protein of unknown function DUF83; KEGG: rrs:RoseRS_2603 hypothetical protein
YP_001637150.1	KEGG: rrs:RoseRS_2604 hypothetical protein
YP_001637151.1	KEGG: rca:Rcas_1814 hypothetical protein
YP_001637152.1	PFAM: BioY protein; KEGG: cya:CYA_2210 BioY family protein
YP_001637153.1	PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; KEGG: rca:Rcas_1187 beta-lactamase domain protein
YP_001637154.1	ATP-dependent carboxylate-amine ligase
YP_001637155.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rca:Rcas_0249 acyl-CoA dehydrogenase domain protein
YP_001637156.1	TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: rrs:RoseRS_0191 RNA polymerase, sigma 70 subunit, RpoD family
YP_001637157.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: afw:Anae109_0766 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001637158.1	PFAM: major facilitator superfamily MFS_1; KEGG: stp:Strop_0632 major facilitator superfamily MFS_1
YP_001637159.1	KEGG: mlo:mll2164 probable secreted protein
YP_001637160.1	PFAM: regulatory protein ArsR; KEGG: rca:Rcas_2310 transcriptional regulator, ArsR family
YP_001637161.1	TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_3610 phosphate binding protein
YP_001637162.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_3611 integral membrane sensor signal transduction histidine kinase
YP_001637163.1	PFAM: response regulator receiver; KEGG: rrs:RoseRS_3612 response regulator receiver protein
YP_001637164.1	PFAM: UbiE/COQ5 methyltransferase; protein of unknown function DUF343; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2114 methyltransferase type 11
YP_001637165.1	KEGG: bbr:BB1032 hypothetical protein
YP_001637166.1	catalyzes the hydrolysis of acylphosphate
YP_001637167.1	KEGG: rca:Rcas_3061 hypothetical protein
YP_001637168.1	PFAM: cyclic nucleotide-binding; KEGG: rrs:RoseRS_3727 cyclic nucleotide-binding protein
YP_001637169.1	KEGG: rrs:RoseRS_0315 transglutaminase domain protein
YP_001637170.1	PFAM: transglutaminase domain protein; KEGG: rrs:RoseRS_0315 transglutaminase domain protein
YP_001637171.1	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; amidohydrolase 2; KEGG: rca:Rcas_0246 hydrolase, TatD family
YP_001637172.1	KEGG: rrs:RoseRS_2231 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_001637173.1	KEGG: rrs:RoseRS_3253 hypothetical protein
YP_001637174.1	KEGG: rrs:RoseRS_3253 hypothetical protein
YP_001637175.1	PFAM: UspA domain protein; KEGG: tth:TTC1218 transcriptional regulator
YP_001637176.1	Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase
YP_001637177.1	KEGG: rrs:RoseRS_4537 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase
YP_001637178.1	KEGG: rrs:RoseRS_0070 hypothetical protein
YP_001637179.1	KEGG: rrs:RoseRS_4121 ErfK/YbiS/YcfS/YnhG family protein
YP_001637180.1	PFAM: histidine triad (HIT) protein; KEGG: rca:Rcas_0006 histidine triad (HIT) protein
YP_001637181.1	PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_0481 conserved hypothetical protein 374
YP_001637182.1	PFAM: FAD dependent oxidoreductase; KEGG: rha:RHA1_ro03303 probable oxidoreductase
YP_001637183.1	KEGG: rrs:RoseRS_4328 hypothetical protein
YP_001637184.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1113 ABC transporter related
YP_001637185.1	KEGG: rca:Rcas_3952 hypothetical protein
YP_001637186.1	PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: rca:Rcas_4297 TrkA-C domain protein
YP_001637187.1	PFAM: nitroreductase; KEGG: rrs:RoseRS_1137 nitroreductase
YP_001637188.1	TIGRFAM: F420-dependent oxidoreductase; PFAM: protein of unknown function DUF129; KEGG: rrs:RoseRS_1136 F420-dependent oxidoreductase, putative
YP_001637189.1	KEGG: rca:Rcas_1474 methylthioadenosine phosphorylase; TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine phosphorylase family 2
YP_001637190.1	PFAM: Abortive infection protein; KEGG: hal:VNG2323H hypothetical protein
YP_001637191.1	KEGG: cch:Cag_0445 hypothetical protein
YP_001637192.1	PFAM: TPR repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sth:STH810 transcriptional regulator
YP_001637193.1	KEGG: rrs:RoseRS_1029 hypothetical protein
YP_001637194.1	KEGG: rrs:RoseRS_1030 hypothetical protein
YP_001637195.1	TIGRFAM: methyltransferase FkbM family; KEGG: sso:SSO1613 hypothetical protein
YP_001637196.1	KEGG: rrs:RoseRS_2309 hypothetical protein
YP_001637197.1	KEGG: rso:RSp0990 TIS1421-transposase protein A
YP_001637198.1	PFAM: transposase IS4 family protein; KEGG: asa:ASA_0455 transposase B
YP_001637200.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_4613 AMP-dependent synthetase and ligase
YP_001637201.1	PFAM: alpha/beta hydrolase fold; KEGG: sth:STH2847 hypothetical protein
YP_001637202.1	PFAM: alpha/beta hydrolase fold; KEGG: rca:Rcas_0413 alpha/beta hydrolase fold
YP_001637203.1	PFAM: MaoC domain protein dehydratase; KEGG: mmw:Mmwyl1_2239 MaoC domain protein dehydratase
YP_001637204.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reh:H16_A2258 enoyl-CoA hydratase/carnithine racemase
YP_001637205.1	KEGG: mmr:Mmar10_0309 MaoC-like dehydratase
YP_001637206.1	PFAM: Extracellular ligand-binding receptor; KEGG: rrs:RoseRS_4104 extracellular ligand-binding receptor
YP_001637207.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_4105 ABC transporter related
YP_001637208.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_4106 ABC transporter related
YP_001637209.1	PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_4107 inner-membrane translocator
YP_001637210.1	PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_4108 inner-membrane translocator
YP_001637211.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_4284 DNA methylase N-4/N-6 domain protein
YP_001637212.1	3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase-like; KEGG: rrs:RoseRS_3990 6-phosphogluconate dehydrogenase, NAD-binding
YP_001637213.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rxy:Rxyl_2851 hydroxypyruvate isomerase
YP_001637214.1	consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG: cef:CE0769 putative sensor kinase
YP_001637215.1	KEGG: rca:Rcas_1294 hypothetical protein
YP_001637216.1	TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rca:Rcas_1295 ubiquinone/menaquinone biosynthesis methyltransferase
YP_001637217.1	PFAM: Asparaginase/glutaminase; KEGG: rrs:RoseRS_2187 asparaginase/glutaminase
YP_001637218.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rca:Rcas_1298 methyltransferase type 11
YP_001637219.1	PFAM: conserved hypothetical protein; KEGG: rca:Rcas_3213 hypothetical protein
YP_001637220.1	PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_3901 glycosyl transferase, family 2
YP_001637221.1	KEGG: rca:Rcas_3210 hypothetical protein
YP_001637222.1	KEGG: rrs:RoseRS_3908 hypothetical protein
YP_001637223.1	PFAM: PBS lyase HEAT domain protein repeat-containing protein; SH3 type 3 domain protein; KEGG: rca:Rcas_3413 PBS lyase heat domain protein repeat-containing protein
YP_001637224.1	KEGG: rrs:RoseRS_1561 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein
YP_001637225.1	modulates transcription in response to the NADH/NAD(+) redox state
YP_001637226.1	TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; KEGG: pfl:PFL_3488 salicylate biosynthesis isochorismate synthase
YP_001637227.1	TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; PFAM: thiamine pyrophosphate protein TPP binding domain protein; KEGG: gtn:GTNG_2773 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylicacid synthase/2-oxoglutarate decarboxylase
YP_001637228.1	TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: rca:Rcas_3460 acetylornithine and succinylornithine aminotransferase
YP_001637232.1	KEGG: mav:MAV_1108 hypothetical protein
YP_001637234.1	KEGG: mac:MA2043 hypothetical protein
YP_001637236.1	KEGG: rrs:RoseRS_1682 YD repeat protein
YP_001637238.1	PFAM: transposase IS4 family protein; KEGG: bxe:Bxe_B2711 putative transposase
YP_001637239.1	KEGG: rso:RSp0990 TIS1421-transposase protein A
YP_001637241.1	PFAM: ATP-NAD/AcoX kinase; KEGG: cbh:CLC_1658 acetoin catabolism protein X
YP_001637242.1	PFAM: alpha/beta hydrolase fold; biotin/lipoyl attachment domain-containing protein; peptidase S15; E3 binding domain protein; KEGG: rle:pRL80022 hypothetical protein
YP_001637243.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: btl:BALH_2493 acetoin dehydrogenase (TPP-dependent) E1 component beta subunit
YP_001637244.1	PFAM: dehydrogenase E1 component; KEGG: rxy:Rxyl_2403 pyruvate dehydrogenase (lipoamide)
YP_001637245.1	KEGG: rrs:RoseRS_4582 hypothetical protein
YP_001637246.1	PFAM: SNARE associated Golgi protein; KEGG: rca:Rcas_0729 SNARE associated Golgi protein
YP_001637247.1	KEGG: rca:Rcas_1584 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; TIGRFAM: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_001637248.1	TIGRFAM: bacteriochlorophyll 4-vinyl reductase; PFAM: 4-vinyl reductase 4VR; KEGG: rca:Rcas_1582 bacteriochlorophyll 4-vinyl reductase
YP_001637249.1	TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: rca:Rcas_0556 hemolysin A
YP_001637250.1	KEGG: rrs:RoseRS_3861 hypothetical protein
YP_001637251.1	PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: rrs:RoseRS_0174 cobalamin (vitamin B12) biosynthesis CbiM protein
YP_001637252.1	TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: rrs:RoseRS_0170 cobalt ABC transporter, inner membrane subunit CbiQ
YP_001637253.1	KEGG: rrs:RoseRS_0169 cobalt ABC transporter, ATPase subunit; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001637254.1	PFAM: NUDIX hydrolase; KEGG: pca:Pcar_2673 ADP-ribose pyrophosphatase
YP_001637255.1	PFAM: glutathione peroxidase; KEGG: rca:Rcas_2947 glutathione peroxidase
YP_001637256.1	KEGG: rrs:RoseRS_1689 YD repeat-containing protein
YP_001637257.1	KEGG: rrs:RoseRS_2323 hypothetical protein
YP_001637266.1	KEGG: mac:MA2043 hypothetical protein
YP_001637268.1	PFAM: transposase IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4
YP_001637269.1	KEGG: rrs:RoseRS_1681 hypothetical protein
YP_001637272.1	KEGG: rrs:RoseRS_2325 hypothetical protein
YP_001637275.1	KEGG: spe:Spro_4104 hypothetical protein
YP_001637276.1	KEGG: rca:Rcas_2869 hypothetical protein
YP_001637277.1	KEGG: mac:MA2043 hypothetical protein
YP_001637279.1	KEGG: rca:Rcas_0998 galactokinase; TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein
YP_001637280.1	PFAM: alpha/beta hydrolase fold; KEGG: rca:Rcas_0878 alpha/beta hydrolase fold
YP_001637281.1	KEGG: rca:Rcas_0058 hypothetical protein
YP_001637282.1	KEGG: hch:HCH_02322 hypothetical protein
YP_001637283.1	catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde; FAD-binding; can also catalyze the demethylation of other N-methyl amino acids
YP_001637284.1	KEGG: rrs:RoseRS_1901 hypothetical protein
YP_001637285.1	KEGG: rrs:RoseRS_1900 hypothetical protein
YP_001637286.1	KEGG: rrs:RoseRS_2584 hypothetical protein
YP_001637287.1	KEGG: rca:Rcas_1689 hypothetical protein
YP_001637288.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_0164 ABC transporter related
YP_001637289.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rca:Rcas_0165 binding-protein-dependent transport systems inner membrane component
YP_001637290.1	PFAM: transposase IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4
YP_001637291.1	TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: swo:Swol_1082 divalent cation transporter
YP_001637292.1	KEGG: ppd:Ppro_2165 hypothetical protein
YP_001637293.1	TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: rca:Rcas_1531 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase
YP_001637294.1	SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide
YP_001637295.1	KEGG: syc:syc1675_d hypothetical protein
YP_001637296.1	KEGG: rca:Rcas_3283 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase
YP_001637297.1	PFAM: Colicin V production protein
YP_001637299.1	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)
YP_001637300.1	PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: rca:Rcas_1828 polysaccharide biosynthesis protein
YP_001637301.1	KEGG: rca:Rcas_0895 hypothetical protein
YP_001637302.1	TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: rrs:RoseRS_2960 putative endoribonuclease L-PSP
YP_001637303.1	KEGG: rrs:RoseRS_3175 hypothetical protein
YP_001637304.1	PFAM: Exonuclease VII small subunit; KEGG: rrs:RoseRS_3174 exodeoxyribonuclease VII, small subunit
YP_001637305.1	KEGG: rca:Rcas_2900 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type
YP_001637306.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: rca:Rcas_2899 acetyl-CoA carboxylase, biotin carboxyl carrier protein
YP_001637307.1	KEGG: rrs:RoseRS_0054 hypothetical protein
YP_001637308.1	PFAM: phosphotransferase KptA/Tpt1; KEGG: rrs:RoseRS_1806 phosphate acetyltransferase
YP_001637309.1	PFAM: Polyprenyl synthetase; KEGG: rrs:RoseRS_1698 polyprenyl synthetase
YP_001637310.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_1760 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001637311.1	KEGG: rca:Rcas_2037 putative transmembrane anti-sigma factor
YP_001637312.1	KEGG: sus:Acid_3667 hypothetical protein
YP_001637313.1	PFAM: dienelactone hydrolase; KEGG: mag:amb4377 putative carboxymethylenebutenolidase precursor
YP_001637314.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: transcriptional regulator TrmB; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: sth:STH2875 putative cadmium-transporting ATPase
YP_001637315.1	PFAM: peptidase S45 penicillin amidase; KEGG: rca:Rcas_1469 peptidase S45 penicillin amidase
YP_001637316.1	KEGG: rrs:RoseRS_4163 hypothetical protein
YP_001637317.1	PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: det:DET0206 D-glycero-D-manno-heptose 7-phosphate kinase, putative
YP_001637318.1	TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: rrs:RoseRS_4218 histidinol-phosphate phosphatase family protein
YP_001637319.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rca:Rcas_0460 hypothetical protein
YP_001637320.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: rrs:RoseRS_4219 lipopolysaccharide biosynthesis protein
YP_001637321.1	KEGG: rca:Rcas_0452 hypothetical protein
YP_001637322.1	KEGG: rca:Rcas_0453 hypothetical protein
YP_001637323.1	KEGG: rrs:RoseRS_4226 membrane protein-like protein
YP_001637324.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_0456 glycosyl transferase group 1
YP_001637325.1	PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: rrs:RoseRS_4228 polysaccharide biosynthesis protein
YP_001637326.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_0458 glycosyl transferase group 1
YP_001637327.1	PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_0459 glycosyl transferase family 2
YP_001637328.1	PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4232 glycosyl transferase, group 1
YP_001637329.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_0462 glycosyl transferase group 1
YP_001637330.1	PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_0463 glycosyl transferase family 2
YP_001637331.1	PFAM: O-antigen polymerase; KEGG: rca:Rcas_0465 O-antigen polymerase
YP_001637332.1	PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: rca:Rcas_0466 glycosyl hydrolase BNR repeat-containing protein
YP_001637333.1	KEGG: rrs:RoseRS_4239 hypothetical protein
YP_001637334.1	KEGG: rca:Rcas_0469 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like protein
YP_001637335.1	KEGG: rrs:RoseRS_4242 hypothetical protein
YP_001637336.1	KEGG: rrs:RoseRS_3863 laminin G, sub domain 2
YP_001637337.1	PFAM: Laminin G sub domain 2; SMART: Laminin G; LamG domain protein jellyroll fold domain protein; KEGG: rca:Rcas_0555 laminin G sub domain 2
YP_001637338.1	SMART: Laminin G; KEGG: rrs:RoseRS_3871 laminin G, sub domain 2
YP_001637339.1	KEGG: rca:Rcas_3965 hypothetical protein
YP_001637340.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rrs:RoseRS_1126 short-chain dehydrogenase/reductase SDR
YP_001637341.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rca:Rcas_3967 AMP-dependent synthetase and ligase
YP_001637342.1	KEGG: rca:Rcas_3968 hypothetical protein
YP_001637343.1	KEGG: rca:Rcas_3969 transferase hexapeptide repeat containing protein
YP_001637344.1	PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: rca:Rcas_3971 UDP-N-acetylglucosamine 2-epimerase
YP_001637345.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: rrs:RoseRS_4220 transferase hexapeptide repeat containing protein
YP_001637346.1	PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4222 glycosyl transferase, family 2
YP_001637348.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rrs:RoseRS_4225 radical SAM domain protein
YP_001637349.1	KEGG: rca:Rcas_0469 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like protein
YP_001637350.1	KEGG: rca:Rcas_0468 hypothetical protein
YP_001637351.1	PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_1340 glycosyl transferase, group 1
YP_001637352.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_1626 glycosyl transferase group 1
YP_001637353.1	PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_1130 glycosyl transferase, family 2
YP_001637354.1	KEGG: rrs:RoseRS_1132 protein of unknown function DUF6, transmembrane
YP_001637355.1	KEGG: rrs:RoseRS_3171 sugar isomerase (SIS)
YP_001637356.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pth:PTH_0393 predicted pyridoxal phosphate-dependent enzyme
YP_001637357.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rca:Rcas_3973 amine oxidase
YP_001637358.1	KEGG: rrs:RoseRS_1134 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase
YP_001637359.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_1135 oxidoreductase domain protein
YP_001637360.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bcz:BCZK2688 long-chain-fatty-acid--CoA ligase
YP_001637361.1	KEGG: rrs:RoseRS_2930 hypothetical protein
YP_001637362.1	PFAM: protein of unknown function DUF344; KEGG: rca:Rcas_2786 protein of unknown function DUF344
YP_001637363.1	KEGG: pol:Bpro_0212 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001637364.1	PFAM: response regulator receiver; KEGG: pol:Bpro_0213 response regulator receiver domain protein (CheY-like)
YP_001637365.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; Hpt domain protein; KEGG: mag:amb3006 response regulator containing a CheY-like receiver domain and a GGDEF domain
YP_001637366.1	PFAM: response regulator receiver; Cobyrinic acid ac-diamide synthase; KEGG: rca:Rcas_1683 response regulator receiver protein
YP_001637367.1	KEGG: rca:Rcas_1813 hypothetical protein
YP_001637368.1	PFAM: metallophosphoesterase; KEGG: rca:Rcas_1812 metallophosphoesterase
YP_001637369.1	PFAM: aminotransferase class-III; KEGG: rca:Rcas_1811 aminotransferase class-III
YP_001637370.1	KEGG: rca:Rcas_4278 putative undecaprenol kinase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA
YP_001637371.1	PFAM: integrase family protein; KEGG: rca:Rcas_0044 integrase family protein
YP_001637372.1	TIGRFAM: chlorophyllide reductase subunit Y; PFAM: oxidoreductase/nitrogenase component 1; KEGG: rrs:RoseRS_3257 chlorophyllide reductase subunit Y
YP_001637373.1	TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase component 1; KEGG: rrs:RoseRS_3256 chlorophyllide reductase subunit Z
YP_001637374.1	TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; KEGG: deb:DehaBAV1_0723 stationary-phase survival protein SurE
YP_001637375.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
YP_001637376.1	KEGG: rrs:RoseRS_3488 citrate synthase I; TIGRFAM: citrate synthase I; PFAM: Citrate synthase
YP_001637377.1	KEGG: rrs:RoseRS_1784 hypothetical protein
YP_001637378.1	PFAM: major facilitator superfamily MFS_1; KEGG: ava:Ava_0244 major facilitator superfamily MFS_1
YP_001637379.1	PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: hma:rrnAC1789 probable formimidoylglutamase
YP_001637380.1	KEGG: rca:Rcas_2160 hypothetical protein
YP_001637381.1	PFAM: Forkhead-associated protein; KEGG: rca:Rcas_2161 FHA domain containing protein
YP_001637382.1	PFAM: von Willebrand factor type A; KEGG: rca:Rcas_2162 von Willebrand factor type A
YP_001637383.1	PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: rca:Rcas_2163 protein serine/threonine phosphatase
YP_001637384.1	PFAM: protein kinase; Pyrrolo-quinoline quinone; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_1465 protein kinase
YP_001637385.1	PFAM: carbohydrate kinase FGGY; KEGG: ttj:TTHB142 glycerol kinase
YP_001637386.1	KEGG: rrs:RoseRS_0260 hypothetical protein
YP_001637387.1	PFAM: TPR repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rca:Rcas_3701 transcriptional regulator, SARP family
YP_001637389.1	PFAM: coagulation factor 5/8 type domain protein; KEGG: sde:Sde_3709 hypothetical protein
YP_001637390.1	PFAM: WD40 domain protein beta Propeller; KEGG: rrs:RoseRS_2358 hypothetical protein
YP_001637391.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rrs:RoseRS_3197 protein of unknown function DUF21
YP_001637392.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
YP_001637393.1	PFAM: peptidase M50; KEGG: rrs:RoseRS_3812 peptidase M50
YP_001637394.1	KEGG: rrs:RoseRS_1729 hypothetical protein
YP_001637395.1	PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC1447 MDR-type permease, probably tetracycline resistance protein
YP_001637396.1	PFAM: periplasmic binding protein; KEGG: cpe:CPE0792 probable iron(III) dicitrate ABC transporter
YP_001637397.1	PFAM: transport system permease protein; KEGG: rxy:Rxyl_0414 transport system permease protein
YP_001637398.1	KEGG: rxy:Rxyl_0417 hypothetical protein
YP_001637399.1	PFAM: transport system permease protein; KEGG: ana:all2585 iron(III) dicitrate transport system permease protein
YP_001637400.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rxy:Rxyl_0416 ABC transporter related
YP_001637401.1	PFAM: periplasmic binding protein; KEGG: ana:alr2593 iron(III) dicitrate transport system substrate-binding protein
YP_001637402.1	PFAM: periplasmic binding protein; KEGG: rxy:Rxyl_0418 twin-arginine translocation pathway signal
YP_001637403.1	PFAM: periplasmic binding protein; KEGG: syn:slr1492 ABC-type iron(III) dicitrate transport system substrate-binding protein
YP_001637404.1	PFAM: aldo/keto reductase; KEGG: afw:Anae109_3206 aldo/keto reductase
YP_001637405.1	KEGG: rca:Rcas_1050 hypothetical protein
YP_001637406.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: kra:Krad_2717 alcohol dehydrogenase GroES domain protein
YP_001637407.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: rca:Rcas_1054 transcriptional regulator, AraC family
YP_001637408.1	KEGG: rca:Rcas_2703 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases
YP_001637409.1	PFAM: ribosomal protein L25; KEGG: rrs:RoseRS_0426 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
YP_001637410.1	PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_1158 glycosyl transferase family 2
YP_001637411.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: gfo:GFO_0313 acyl-CoA dehydrogenase
YP_001637413.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001637414.1	KEGG: rca:Rcas_3712 hypothetical protein
YP_001637415.1	PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: rca:Rcas_3713 Holliday junction resolvase YqgF
YP_001637416.1	PFAM: GCN5-related N-acetyltransferase; KEGG: mxa:MXAN_3222 acetyltransferase, GNAT family
YP_001637417.1	KEGG: rrs:RoseRS_1079 hypothetical protein
YP_001637418.1	KEGG: mhu:Mhun_2816 hypothetical protein
YP_001637419.1	KEGG: mhu:Mhun_2817 hypothetical protein
YP_001637420.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rca:Rcas_0960 two component transcriptional regulator, winged helix family
YP_001637421.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_3486 integral membrane sensor signal transduction histidine kinase
YP_001637422.1	PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: pfl:PFL_4065 cyclic beta 1-2 glucan synthetase, putative
YP_001637423.1	PFAM: extracellular solute-binding protein family 1; KEGG: pho:PH0753 multiple sugar transport system substrate-binding protein
YP_001637424.1	PFAM: extracellular solute-binding protein family 1; KEGG: fno:Fnod_0294 extracellular solute-binding protein family 1
YP_001637425.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fno:Fnod_0293 binding-protein-dependent transport systems inner membrane component
YP_001637426.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fno:Fnod_0292 binding-protein-dependent transport systems inner membrane component
YP_001637427.1	PFAM: NHL repeat containing protein; KEGG: fno:Fnod_0291 NHL repeat containing protein
YP_001637428.1	KEGG: fno:Fnod_1596 hypothetical protein
YP_001637429.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fno:Fnod_1597 binding-protein-dependent transport systems inner membrane component
YP_001637430.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fno:Fnod_0288 binding-protein-dependent transport systems inner membrane component
YP_001637431.1	KEGG: fno:Fnod_0251 hypothetical protein
YP_001637432.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: efa:EF1240 sugar-binding transcriptional regulator, LacI family
YP_001637433.1	KEGG: fno:Fnod_0251 hypothetical protein
YP_001637434.1	PFAM: glycoside hydrolase family 35; Glycoside hydrolase family 42 domain protein; KEGG: mca:MCA0941 glycosyl hydrolase, putative
YP_001637435.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: sus:Acid_6936 glycoside hydrolase, family 3 domain protein
YP_001637436.1	PFAM: inner-membrane translocator; KEGG: cyb:CYB_1202 hydrophobic amino acid uptake ABC transporter (HAAT) family, permease protein
YP_001637437.1	PFAM: inner-membrane translocator; KEGG: cyb:CYB_0309 carbohydrate uptake ABC transporter-2 (CUT2) family, permease protein
YP_001637438.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cyb:CYB_1651 sugar ABC transporter, ATP-binding protein
YP_001637439.1	PFAM: basic membrane lipoprotein; KEGG: cyb:CYB_1265 hypothetical protein
YP_001637440.1	KEGG: rrs:RoseRS_4116 allergen V5/TPX-1 family protein
YP_001637441.1	amylomaltase; acts to release glucose from maltodextrins
YP_001637442.1	KEGG: rca:Rcas_2214 DNA replication and repair protein RecF; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; SMART: AAA ATPase
YP_001637443.1	catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate
YP_001637444.1	KEGG: rrs:RoseRS_4199 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001637445.1	PFAM: protein of unknown function DUF820; KEGG: rca:Rcas_0614 protein of unknown function DUF820
YP_001637446.1	PFAM: FAD dependent oxidoreductase; KEGG: rrs:RoseRS_0964 FAD dependent oxidoreductase
YP_001637447.1	PFAM: beta-lactamase; KEGG: rca:Rcas_2208 serine-type D-Ala-D-Ala carboxypeptidase
YP_001637448.1	PFAM: biotin/lipoate A/B protein ligase; KEGG: azo:azo3871 putative lipoate protein ligase
YP_001637449.1	KEGG: lin:lin2753 hypothetical protein
YP_001637450.1	KEGG: rrs:RoseRS_4300 hypothetical protein
YP_001637451.1	KEGG: rrs:RoseRS_2062 hypothetical protein
YP_001637452.1	PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_2061 hypothetical protein
YP_001637453.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_2057 integral membrane sensor signal transduction histidine kinase
YP_001637454.1	PFAM: phosphoenolpyruvate carboxylase; KEGG: rrs:RoseRS_3110 phosphoenolpyruvate carboxylase
YP_001637455.1	TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: gka:GK0676 isocitrate lyase
YP_001637456.1	PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: cth:Cthe_2453 hypothetical protein
YP_001637457.1	KEGG: rca:Rcas_0056 hypothetical protein
YP_001637458.1	TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rrs:RoseRS_3319 threonine dehydratase
YP_001637459.1	PFAM: cell cycle protein; KEGG: rca:Rcas_1647 cell cycle protein
YP_001637460.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rca:Rcas_3633 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001637461.1	PFAM: protein of unknown function DUF1641; KEGG: sru:SRU_0318 hypothetical protein
YP_001637462.1	PFAM: beta-lactamase domain protein; Rhodanese domain protein; KEGG: bld:BLi02785 putative hydrolase; RBL03501
YP_001637463.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rrs:RoseRS_3960 transcriptional regulator, LysR family
YP_001637464.1	KEGG: rrs:RoseRS_2794 hypothetical protein
YP_001637465.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_2793 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001637466.1	TIGRFAM: glutaredoxin-like domain protein; KEGG: rrs:RoseRS_3949 glutaredoxin-like domain protein
YP_001637467.1	PFAM: major facilitator superfamily MFS_1; KEGG: rca:Rcas_2611 major facilitator superfamily MFS_1
YP_001637468.1	KEGG: rca:Rcas_1799 putative esterase
YP_001637469.1	PFAM: TadE family protein; KEGG: rca:Rcas_1688 TadE family protein
YP_001637470.1	PFAM: TadE family protein; KEGG: rrs:RoseRS_1268 PA14 domain protein
YP_001637471.1	SMART: von Willebrand factor type A; KEGG: rrs:RoseRS_1269 von Willebrand factor, type A
YP_001637472.1	KEGG: rrs:RoseRS_1271 kelch repeat-containing protein
YP_001637473.1	KEGG: mlo:mlr3412 glucokinase
YP_001637474.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: rca:Rcas_2008 transferase hexapeptide repeat containing protein
YP_001637475.1	PFAM: peptidase M14 carboxypeptidase A; KEGG: rrs:RoseRS_3979 peptidase M14, carboxypeptidase A
YP_001637476.1	PFAM: protein of unknown function DUF58; KEGG: rrs:RoseRS_1836 protein of unknown function DUF58
YP_001637477.1	PFAM: virulence factor MVIN family protein; KEGG: rca:Rcas_0625 virulence factor MviN family protein
YP_001637478.1	KEGG: syn:slr0302 PleD gene product; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001637479.1	KEGG: rca:Rcas_2246 hypothetical protein
YP_001637480.1	TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; homocysteine S-methyltransferase; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein; KEGG: rca:Rcas_3878 methionine synthase
YP_001637481.1	TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: rrs:RoseRS_0310 phosphate uptake regulator, PhoU
YP_001637482.1	KEGG: rca:Rcas_0388 nicotinamidase-like amidase
YP_001637483.1	KEGG: rca:Rcas_1690 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein
YP_001637484.1	PFAM: Ferritin Dps family protein; KEGG: rca:Rcas_3287 ferroxidase
YP_001637485.1	KEGG: rru:Rru_A0614 hypothetical protein
YP_001637486.1	TIGRFAM: acetyl coenzyme A synthetase (ADP forming), alpha domain protein; PFAM: CoA-binding domain protein; KEGG: rca:Rcas_0076 acetyl coenzyme A synthetase (ADP forming) alpha domain
YP_001637487.1	PFAM: DRTGG domain protein; KEGG: rrs:RoseRS_4533 DRTGG domain protein
YP_001637488.1	KEGG: rrs:RoseRS_1311 hypothetical protein
YP_001637489.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors
YP_001637491.1	KEGG: mta:Moth_0883 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase
YP_001637492.1	PFAM: phosphoribosyltransferase; KEGG: syg:sync_2377 orotate phosphoribosyltransferase (OprT) (OPRTase), putative
YP_001637495.1	KEGG: rrs:RoseRS_1470 hypothetical protein
YP_001637497.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_1471 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001637498.1	KEGG: rrs:RoseRS_1472 hypothetical protein
YP_001637499.1	PFAM: inner-membrane translocator; KEGG: rca:Rcas_1633 inner-membrane translocator
YP_001637500.1	TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: rca:Rcas_4453 segregation and condensation protein B