-- dump date 20250216_234516 -- class Genbank::Contig -- table contig_comment -- id comment NZ_AP019312.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to AP019312.1.REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp).REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v.REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18;REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200xREFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeqREFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,936REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,936 CDSs (total) :: 4,822REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,936 CDSs (total) :: 4,822 Genes (coding) :: 4,798REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,936 CDSs (total) :: 4,822 Genes (coding) :: 4,798 CDSs (with protein) :: 4,798REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,936 CDSs (total) :: 4,822 Genes (coding) :: 4,798 CDSs (with protein) :: 4,798 Genes (RNA) :: 114REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,936 CDSs (total) :: 4,822 Genes (coding) :: 4,798 CDSs (with protein) :: 4,798 Genes (RNA) :: 114 rRNAs :: 9, 8, 8 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,936 CDSs (total) :: 4,822 Genes (coding) :: 4,798 CDSs (with protein) :: 4,798 Genes (RNA) :: 114 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,936 CDSs (total) :: 4,822 Genes (coding) :: 4,798 CDSs (with protein) :: 4,798 Genes (RNA) :: 114 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 86REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,936 CDSs (total) :: 4,822 Genes (coding) :: 4,798 CDSs (with protein) :: 4,798 Genes (RNA) :: 114 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 86 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,936 CDSs (total) :: 4,822 Genes (coding) :: 4,798 CDSs (with protein) :: 4,798 Genes (RNA) :: 114 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 86 ncRNAs :: 3 Pseudo Genes (total) :: 24REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,936 CDSs (total) :: 4,822 Genes (coding) :: 4,798 CDSs (with protein) :: 4,798 Genes (RNA) :: 114 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 86 ncRNAs :: 3 Pseudo Genes (total) :: 24 CDSs (without protein) :: 24REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,936 CDSs (total) :: 4,822 Genes (coding) :: 4,798 CDSs (with protein) :: 4,798 Genes (RNA) :: 114 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 86 ncRNAs :: 3 Pseudo Genes (total) :: 24 CDSs (without protein) :: 24 Pseudo Genes (ambiguous residues) :: 0 of 24REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,936 CDSs (total) :: 4,822 Genes (coding) :: 4,798 CDSs (with protein) :: 4,798 Genes (RNA) :: 114 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 86 ncRNAs :: 3 Pseudo Genes (total) :: 24 CDSs (without protein) :: 24 Pseudo Genes (ambiguous residues) :: 0 of 24 Pseudo Genes (frameshifted) :: 14 of 24REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,936 CDSs (total) :: 4,822 Genes (coding) :: 4,798 CDSs (with protein) :: 4,798 Genes (RNA) :: 114 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 86 ncRNAs :: 3 Pseudo Genes (total) :: 24 CDSs (without protein) :: 24 Pseudo Genes (ambiguous residues) :: 0 of 24 Pseudo Genes (frameshifted) :: 14 of 24 Pseudo Genes (incomplete) :: 19 of 24REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,936 CDSs (total) :: 4,822 Genes (coding) :: 4,798 CDSs (with protein) :: 4,798 Genes (RNA) :: 114 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 86 ncRNAs :: 3 Pseudo Genes (total) :: 24 CDSs (without protein) :: 24 Pseudo Genes (ambiguous residues) :: 0 of 24 Pseudo Genes (frameshifted) :: 14 of 24 Pseudo Genes (incomplete) :: 19 of 24 Pseudo Genes (internal stop) :: 5 of 24REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,936 CDSs (total) :: 4,822 Genes (coding) :: 4,798 CDSs (with protein) :: 4,798 Genes (RNA) :: 114 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 86 ncRNAs :: 3 Pseudo Genes (total) :: 24 CDSs (without protein) :: 24 Pseudo Genes (ambiguous residues) :: 0 of 24 Pseudo Genes (frameshifted) :: 14 of 24 Pseudo Genes (incomplete) :: 19 of 24 Pseudo Genes (internal stop) :: 5 of 24 Pseudo Genes (multiple problems) :: 11 of 24REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,936 CDSs (total) :: 4,822 Genes (coding) :: 4,798 CDSs (with protein) :: 4,798 Genes (RNA) :: 114 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 86 ncRNAs :: 3 Pseudo Genes (total) :: 24 CDSs (without protein) :: 24 Pseudo Genes (ambiguous residues) :: 0 of 24 Pseudo Genes (frameshifted) :: 14 of 24 Pseudo Genes (incomplete) :: 19 of 24 Pseudo Genes (internal stop) :: 5 of 24 Pseudo Genes (multiple problems) :: 11 of 24 CRISPR Arrays :: 1REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,936 CDSs (total) :: 4,822 Genes (coding) :: 4,798 CDSs (with protein) :: 4,798 Genes (RNA) :: 114 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 86 ncRNAs :: 3 Pseudo Genes (total) :: 24 CDSs (without protein) :: 24 Pseudo Genes (ambiguous residues) :: 0 of 24 Pseudo Genes (frameshifted) :: 14 of 24 Pseudo Genes (incomplete) :: 19 of 24 Pseudo Genes (internal stop) :: 5 of 24 Pseudo Genes (multiple problems) :: 11 of 24 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP019312.1. Annotated by DFAST v.1.0.8 (https://dfast.nig.ac.jp). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0; circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v. 20140604 Genome Coverage :: 200x Sequencing Technology :: Sequel; iSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_009936155.1-RS_2024_12_13 Annotation Date :: 12/13/2024 14:53:40 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,936 CDSs (total) :: 4,822 Genes (coding) :: 4,798 CDSs (with protein) :: 4,798 Genes (RNA) :: 114 rRNAs :: 9, 8, 8 (5S, 16S, 23S) complete rRNAs :: 9, 8, 8 (5S, 16S, 23S) tRNAs :: 86 ncRNAs :: 3 Pseudo Genes (total) :: 24 CDSs (without protein) :: 24 Pseudo Genes (ambiguous residues) :: 0 of 24 Pseudo Genes (frameshifted) :: 14 of 24 Pseudo Genes (incomplete) :: 19 of 24 Pseudo Genes (internal stop) :: 5 of 24 Pseudo Genes (multiple problems) :: 11 of 24 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## COMPLETENESS: full length.