-- dump date 20140619_042716 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_001307147.1 150014893 5291235 280..1629 1 NC_009617.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1629 dnaA 5291235 dnaA Clostridium beijerinckii NCIMB 8052 chromosomal replication initiation protein YP_001307147.1 280 D 290402 CDS YP_001307148.1 150014894 5291236 1891..2991 1 NC_009617.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 2991 5291236 Cbei_0002 Clostridium beijerinckii NCIMB 8052 DNA polymerase III subunit beta YP_001307148.1 1891 D 290402 CDS YP_001307149.1 150014895 5291237 3022..3234 1 NC_009617.1 TIGRFAM: S4 region, YaaA; PFAM: RNA-binding S4 domain protein; KEGG: cpr:CPR_0003 S4 domain protein; S4 region, YaaA 3234 5291237 Cbei_0003 Clostridium beijerinckii NCIMB 8052 S4 region, YaaA YP_001307149.1 3022 D 290402 CDS YP_001307150.1 150014896 5291238 3283..4386 1 NC_009617.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 4386 recF 5291238 recF Clostridium beijerinckii NCIMB 8052 recombination protein F YP_001307150.1 3283 D 290402 CDS YP_001307151.1 150014897 5291239 4386..4646 1 NC_009617.1 KEGG: cpr:CPR_0005 hypothetical protein; hypothetical protein 4646 5291239 Cbei_0005 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307151.1 4386 D 290402 CDS YP_001307152.1 150014898 5291240 4701..6608 1 NC_009617.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 6608 gyrB 5291240 gyrB Clostridium beijerinckii NCIMB 8052 DNA gyrase subunit B YP_001307152.1 4701 D 290402 CDS YP_001307153.1 150014899 5291241 6632..9118 1 NC_009617.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 9118 5291241 Cbei_0007 Clostridium beijerinckii NCIMB 8052 DNA gyrase subunit A YP_001307153.1 6632 D 290402 CDS YP_001307154.1 150014900 5296261 14767..15282 1 NC_009617.1 KEGG: cno:NT01CX_0854 hypothetical protein; metal dependent phosphohydrolase 15282 5296261 Cbei_0008 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001307154.1 14767 D 290402 CDS YP_001307155.1 150014901 5291243 15297..15818 1 NC_009617.1 PFAM: 3H domain protein; Helix-turn-helix, type 11 domain protein; KEGG: cac:CAC0009 uncharacterized conserved protein, ortholog of YrxA B.subtilis; 3H domain-containing protein 15818 5291243 Cbei_0009 Clostridium beijerinckii NCIMB 8052 3H domain-containing protein YP_001307155.1 15297 D 290402 CDS YP_001307156.1 150014902 5291244 15821..17206 1 NC_009617.1 PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: cpr:CPR_0012 BFD-like 2Fe-2S binding domain protein; FAD dependent oxidoreductase 17206 5291244 Cbei_0010 Clostridium beijerinckii NCIMB 8052 FAD dependent oxidoreductase YP_001307156.1 15821 D 290402 CDS YP_001307157.1 150014903 5291245 17223..17450 1 NC_009617.1 PFAM: protein of unknown function DUF1667; KEGG: cpr:CPR_0013 hypothetical protein; hypothetical protein 17450 5291245 Cbei_0011 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307157.1 17223 D 290402 CDS YP_001307158.1 150014904 5296265 18350..18865 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY1661 hypothetical protein; N-acetyltransferase GCN5 18865 5296265 Cbei_0012 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001307158.1 18350 D 290402 CDS YP_001307159.1 150014905 5291247 18862..22341 1 NC_009617.1 TIGRFAM: ATP-dependent nuclease subunit AddB; KEGG: cpe:CPE0020 ATP-dependent deoxyribonuclease chain B; ATP-dependent nuclease subunit AddB 22341 5291247 Cbei_0013 Clostridium beijerinckii NCIMB 8052 ATP-dependent nuclease subunit AddB YP_001307159.1 18862 D 290402 CDS YP_001307160.1 150014906 5291248 22434..26171 1 NC_009617.1 TIGRFAM: Recombination helicase AddA; PFAM: UvrD/REP helicase; KEGG: cpf:CPF_0025 ATP-dependent nuclease, subunit A; recombination helicase AddA 26171 5291248 Cbei_0014 Clostridium beijerinckii NCIMB 8052 recombination helicase AddA YP_001307160.1 22434 D 290402 CDS YP_001307161.1 150014907 5291249 complement(26242..27423) 1 NC_009617.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: cpf:CPF_0028 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 27423 5291249 Cbei_0015 Clostridium beijerinckii NCIMB 8052 ErfK/YbiS/YcfS/YnhG family protein YP_001307161.1 26242 R 290402 CDS YP_001307162.1 150014908 5291250 27639..28121 1 NC_009617.1 hypothetical protein 28121 5291250 Cbei_0016 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307162.1 27639 D 290402 CDS YP_001307163.1 150014909 5291251 28292..29239 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cno:NT01CX_0224 sensory transduction histidine kinase; histidine kinase 29239 5291251 Cbei_0017 Clostridium beijerinckii NCIMB 8052 histidine kinase YP_001307163.1 28292 D 290402 CDS YP_001307164.1 150014910 5296266 complement(29536..30426) 1 NC_009617.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 30426 5296266 Cbei_0018 Clostridium beijerinckii NCIMB 8052 phosphatidylserine decarboxylase YP_001307164.1 29536 R 290402 CDS YP_001307165.1 150014911 5291253 30808..31392 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: ctc:CTC00079 transcriptional regulator, TetR family; TetR family transcriptional regulator 31392 5291253 Cbei_0019 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001307165.1 30808 D 290402 CDS YP_001307166.1 150014912 5291254 31554..32342 1 NC_009617.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: cpf:CPF_1058 Cof-like hydrolase; HAD family hydrolase 32342 5291254 Cbei_0020 Clostridium beijerinckii NCIMB 8052 HAD family hydrolase YP_001307166.1 31554 D 290402 CDS YP_001307167.1 150014913 5291255 complement(32490..34085) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_1757 ABC transporter ATP-binding protein; ABC transporter 34085 5291255 Cbei_0021 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001307167.1 32490 R 290402 CDS YP_001307168.1 150014914 5291256 complement(34318..34911) 1 NC_009617.1 PFAM: Domain of unknown function DUF1836; KEGG: cpf:CPF_1724 hypothetical protein; hypothetical protein 34911 5291256 Cbei_0022 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307168.1 34318 R 290402 CDS YP_001307169.1 150014915 5291257 35133..35780 1 NC_009617.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: bca:BCE_5590 channel protein, hemolysin III family; hemolysin III family channel protein 35780 5291257 Cbei_0023 Clostridium beijerinckii NCIMB 8052 hemolysin III family channel protein YP_001307169.1 35133 D 290402 CDS YP_001307170.1 150014916 5291258 36010..36813 1 NC_009617.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 36813 5291258 Cbei_0024 Clostridium beijerinckii NCIMB 8052 gamma-glutamyl kinase YP_001307170.1 36010 D 290402 CDS YP_001307171.1 150014917 5291259 36839..38083 1 NC_009617.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 38083 proA 5291259 proA Clostridium beijerinckii NCIMB 8052 gamma-glutamyl phosphate reductase YP_001307171.1 36839 D 290402 CDS YP_001307172.1 150014918 5291260 38358..38717 1 NC_009617.1 TIGRFAM: methylglyoxal synthase; PFAM: MGS domain protein; KEGG: oih:OB1767 methylglyoxal synthase; methylglyoxal synthase 38717 5291260 Cbei_0026 Clostridium beijerinckii NCIMB 8052 methylglyoxal synthase YP_001307172.1 38358 D 290402 CDS YP_001307173.1 150014919 5291261 38976..39755 1 NC_009617.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cno:NT01CX_0219 probable short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 39755 5291261 Cbei_0027 Clostridium beijerinckii NCIMB 8052 short-chain dehydrogenase/reductase SDR YP_001307173.1 38976 D 290402 CDS YP_001307174.1 150014920 5291262 40396..41445 1 NC_009617.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 41445 5291262 Cbei_0028 Clostridium beijerinckii NCIMB 8052 carbamoyl phosphate synthase small subunit YP_001307174.1 40396 D 290402 CDS YP_001307175.1 150014921 5291263 41460..44669 1 NC_009617.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 44669 carB 5291263 carB Clostridium beijerinckii NCIMB 8052 carbamoyl phosphate synthase large subunit YP_001307175.1 41460 D 290402 CDS YP_001307176.1 150014922 5291264 44864..45097 1 NC_009617.1 hypothetical protein 45097 5291264 Cbei_0030 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307176.1 44864 D 290402 CDS YP_001307177.1 150014923 5291265 complement(45219..46328) 1 NC_009617.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cac:CAC0277 HD-GYP hydrolase domain containing protein; metal dependent phosphohydrolase 46328 5291265 Cbei_0031 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001307177.1 45219 R 290402 CDS YP_001307178.1 150014924 5291266 46730..47584 1 NC_009617.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 47584 5291266 Cbei_0032 Clostridium beijerinckii NCIMB 8052 glutamate racemase YP_001307178.1 46730 D 290402 CDS YP_001307179.1 150014925 5291267 47690..48214 1 NC_009617.1 PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: cno:NT01CX_0653 peptidyl-prolyl cis-trans isomerase; peptidyl-prolyl isomerase 48214 5291267 Cbei_0033 Clostridium beijerinckii NCIMB 8052 peptidyl-prolyl isomerase YP_001307179.1 47690 D 290402 CDS YP_001307180.1 150014926 5291268 48267..48638 1 NC_009617.1 KEGG: cpe:CPE2565 hypothetical protein; hypothetical protein 48638 5291268 Cbei_0034 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307180.1 48267 D 290402 CDS YP_001307181.1 150014927 5291269 48640..49308 1 NC_009617.1 PFAM: helix-turn-helix domain protein; KEGG: cpe:CPE2564 hypothetical protein; helix-turn-helix domain-containing protein 49308 5291269 Cbei_0035 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001307181.1 48640 D 290402 CDS YP_001307182.1 150014928 5291270 49461..52646 1 NC_009617.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; Peptidoglycan-binding domain 1 protein; KEGG: cac:CAC3245 subtilisin like protease (two fused domains); peptidoglycan binding domain-containing protein 52646 5291270 Cbei_0036 Clostridium beijerinckii NCIMB 8052 peptidoglycan binding domain-containing protein YP_001307182.1 49461 D 290402 CDS YP_001307183.1 150014929 5291271 complement(52779..53747) 1 NC_009617.1 PFAM: Radical SAM domain protein; KEGG: cpf:CPF_1251 radical SAM domain protein; radical SAM domain-containing protein 53747 5291271 Cbei_0037 Clostridium beijerinckii NCIMB 8052 radical SAM domain-containing protein YP_001307183.1 52779 R 290402 CDS YP_001307184.1 150014930 5291272 complement(53805..54881) 1 NC_009617.1 KEGG: cpf:CPF_2884 hypothetical protein; hypothetical protein 54881 5291272 Cbei_0038 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307184.1 53805 R 290402 CDS YP_001307185.1 150014931 5291273 55000..55929 1 NC_009617.1 TIGRFAM: conserved hypothetical radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cno:NT01CX_1004 radical SAM protein, TIGR01212 family; radical SAM protein 55929 5291273 Cbei_0039 Clostridium beijerinckii NCIMB 8052 radical SAM protein YP_001307185.1 55000 D 290402 CDS YP_001307186.1 150014932 5291274 55970..56686 1 NC_009617.1 catalyzes the formation of (2R)-3-sulfolactate from (2R)-2-phospho-3-sulfolactate; 2-phosphosulfolactate phosphatase 56686 5291274 Cbei_0040 Clostridium beijerinckii NCIMB 8052 2-phosphosulfolactate phosphatase YP_001307186.1 55970 D 290402 CDS YP_001307187.1 150014933 5291275 complement(56788..57006) 1 NC_009617.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: cac:CAC0669 hypothetical protein; BFD/(2Fe-2S)-binding domain-containing protein 57006 5291275 Cbei_0041 Clostridium beijerinckii NCIMB 8052 BFD/(2Fe-2S)-binding domain-containing protein YP_001307187.1 56788 R 290402 CDS YP_001307188.1 150014934 5291276 57280..57963 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cpf:CPF_1139 DNA-binding response regulator; two component transcriptional regulator 57963 5291276 Cbei_0042 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001307188.1 57280 D 290402 CDS YP_001307189.1 150014935 5291277 57967..59316 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cpf:CPF_1140 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 59316 5291277 Cbei_0043 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001307189.1 57967 D 290402 CDS YP_001307190.1 150014936 5291278 complement(59470..59835) 1 NC_009617.1 KEGG: dsy:DSY2272 hypothetical protein; hypothetical protein 59835 5291278 Cbei_0044 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307190.1 59470 R 290402 CDS YP_001307191.1 150014937 5291279 complement(59841..60143) 1 NC_009617.1 KEGG: dsy:DSY2271 hypothetical protein; hypothetical protein 60143 5291279 Cbei_0045 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307191.1 59841 R 290402 CDS YP_001307192.1 150014938 5291280 60737..63850 1 NC_009617.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase 63850 ileS 5291280 ileS Clostridium beijerinckii NCIMB 8052 isoleucyl-tRNA synthetase YP_001307192.1 60737 D 290402 CDS YP_001307193.1 150014939 5291281 64112..65110 1 NC_009617.1 PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: cpr:CPR_2548 catabolite control protein A; alanine racemase 65110 5291281 Cbei_0047 Clostridium beijerinckii NCIMB 8052 alanine racemase YP_001307193.1 64112 D 290402 CDS YP_001307194.1 150014940 5291282 65349..65792 1 NC_009617.1 PFAM: regulatory protein, MarR; transcriptional regulator TrmB; KEGG: dsy:DSY1453 hypothetical protein; transcriptional regulator TrmB 65792 5291282 Cbei_0048 Clostridium beijerinckii NCIMB 8052 transcriptional regulator TrmB YP_001307194.1 65349 D 290402 CDS YP_001307195.1 150014941 5291283 65785..67158 1 NC_009617.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cno:NT01CX_1214 MATE efflux family protein; MATE efflux family protein 67158 5291283 Cbei_0049 Clostridium beijerinckii NCIMB 8052 MATE efflux family protein YP_001307195.1 65785 D 290402 CDS YP_001307196.1 150014942 5291284 complement(67214..67399) 1 NC_009617.1 KEGG: cpf:CPF_2858 hypothetical protein; hypothetical protein 67399 5291284 Cbei_0050 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307196.1 67214 R 290402 CDS YP_001307197.1 150014943 5291285 67512..68087 1 NC_009617.1 PFAM: nucleoside recognition domain protein; KEGG: ctc:CTC00238 spore maturation protein A; nucleoside recognition domain-containing protein 68087 5291285 Cbei_0051 Clostridium beijerinckii NCIMB 8052 nucleoside recognition domain-containing protein YP_001307197.1 67512 D 290402 CDS YP_001307198.1 150014944 5291286 68141..68662 1 NC_009617.1 PFAM: nucleoside recognition domain protein; KEGG: cpf:CPF_2856 spore maturation protein B; nucleoside recognition domain-containing protein 68662 5291286 Cbei_0052 Clostridium beijerinckii NCIMB 8052 nucleoside recognition domain-containing protein YP_001307198.1 68141 D 290402 CDS YP_001307199.1 150014945 5291287 68779..70023 1 NC_009617.1 PFAM: peptidase M24; peptidase M24B, X-Pro dipeptidase/aminopeptidase domain protein; KEGG: cpr:CPR_2539 xaa-pro aminopeptidase; peptidase M24 70023 5291287 Cbei_0053 Clostridium beijerinckii NCIMB 8052 peptidase M24 YP_001307199.1 68779 D 290402 CDS YP_001307200.1 150014946 5291288 70131..71906 1 NC_009617.1 PFAM: creatinase; peptidase M24; KEGG: cpf:CPF_0866 metallopeptidase, M24 family; peptidase M24 71906 5291288 Cbei_0054 Clostridium beijerinckii NCIMB 8052 peptidase M24 YP_001307200.1 70131 D 290402 CDS YP_001307201.1 150014947 5291289 72579..74516 1 NC_009617.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 74516 5291289 Cbei_0055 Clostridium beijerinckii NCIMB 8052 methionyl-tRNA synthetase YP_001307201.1 72579 D 290402 CDS YP_001307202.1 150014948 5291290 74848..75660 1 NC_009617.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: cpf:CPF_2843 hydrolase, TatD family; TatD family hydrolase 75660 5291290 Cbei_0056 Clostridium beijerinckii NCIMB 8052 TatD family hydrolase YP_001307202.1 74848 D 290402 CDS YP_001307203.1 150014949 5291291 75956..77008 1 NC_009617.1 PFAM: protein of unknown function DUF348; 3D domain protein; G5 domain protein; KEGG: cpf:CPF_2842 3D/G5 domain protein; hypothetical protein 77008 5291291 Cbei_0057 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307203.1 75956 D 290402 CDS YP_001307204.1 150014950 5291292 77171..77728 1 NC_009617.1 TIGRFAM: primase/topoisomerase like protein; PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein; KEGG: cpr:CPR_2527 primase-like protein; primase/topoisomerase-like protein 77728 5291292 Cbei_0058 Clostridium beijerinckii NCIMB 8052 primase/topoisomerase-like protein YP_001307204.1 77171 D 290402 CDS YP_001307205.1 150014951 5291293 77729..78574 1 NC_009617.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 78574 ksgA 5291293 ksgA Clostridium beijerinckii NCIMB 8052 dimethyladenosine transferase YP_001307205.1 77729 D 290402 CDS YP_001307206.1 150014952 5291294 78744..80903 1 NC_009617.1 KEGG: cpe:CPE2516 hypothetical protein; hypothetical protein 80903 5291294 Cbei_0060 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307206.1 78744 D 290402 CDS YP_001307207.1 150014953 5291295 80915..81487 1 NC_009617.1 KEGG: cpe:CPE2515 hypothetical protein; hypothetical protein 81487 5291295 Cbei_0061 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307207.1 80915 D 290402 CDS YP_001307208.1 150014954 5291296 81707..82477 1 NC_009617.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 82477 5291296 Cbei_0062 Clostridium beijerinckii NCIMB 8052 prolipoprotein diacylglyceryl transferase YP_001307208.1 81707 D 290402 CDS YP_001307209.1 150014955 5291297 82467..83303 1 NC_009617.1 KEGG: cpe:CPE2513 hypothetical protein; hypothetical protein 83303 5291297 Cbei_0063 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307209.1 82467 D 290402 CDS YP_001307210.1 150014956 5291298 83322..84161 1 NC_009617.1 KEGG: cpf:CPF_2835 Mrp/NBP35 ATP-binding family protein; Mrp/NBP35 ATP-binding family protein 84161 5291298 Cbei_0064 Clostridium beijerinckii NCIMB 8052 Mrp/NBP35 ATP-binding family protein YP_001307210.1 83322 D 290402 CDS YP_001307211.1 150014957 5291299 84291..84482 1 NC_009617.1 KEGG: cpr:CPR_2520 ferredoxin; ferredoxin 84482 5291299 Cbei_0065 Clostridium beijerinckii NCIMB 8052 ferredoxin YP_001307211.1 84291 D 290402 CDS YP_001307212.1 150014958 5291300 complement(84713..85390) 1 NC_009617.1 TIGRFAM: proton-coupled thiamine transporter YuaJ; KEGG: cpf:CPF_1622 probable proton-coupled thiamine transporter YuaJ; proton-coupled thiamine transporter YuaJ 85390 5291300 Cbei_0066 Clostridium beijerinckii NCIMB 8052 proton-coupled thiamine transporter YuaJ YP_001307212.1 84713 R 290402 CDS YP_001307213.1 150014959 5291301 complement(85951..86799) 1 NC_009617.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: cac:CAC0948 uncharacterized protein, DegV family; degV family protein 86799 5291301 Cbei_0067 Clostridium beijerinckii NCIMB 8052 degV family protein YP_001307213.1 85951 R 290402 CDS YP_001307214.1 150014960 5291302 87260..89368 1 NC_009617.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 89368 5291302 Cbei_0068 Clostridium beijerinckii NCIMB 8052 anaerobic ribonucleoside triphosphate reductase YP_001307214.1 87260 D 290402 CDS YP_001307215.1 150014961 5291303 89973..91142 1 NC_009617.1 in Methanococcus jannaschii this protein catalyzes the condensation of alpha-ketoglutarate and acetyl-CoA to form trans-homoaconitate; functions in alphaketosuberate synthesis which is a precursor in coenzyme B and biotin synthesis; trans-homoaconitate synthase 91142 aksA 5291303 aksA Clostridium beijerinckii NCIMB 8052 trans-homoaconitate synthase YP_001307215.1 89973 D 290402 CDS YP_001307216.1 150014962 5291304 91157..93079 1 NC_009617.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 93079 5291304 Cbei_0070 Clostridium beijerinckii NCIMB 8052 aconitate hydratase YP_001307216.1 91157 D 290402 CDS YP_001307217.1 150014963 5291305 93285..93794 1 NC_009617.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; KEGG: cpf:CPF_2826 anaerobic ribonucleoside-triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein 93794 5291305 Cbei_0071 Clostridium beijerinckii NCIMB 8052 anaerobic ribonucleoside-triphosphate reductase activating protein YP_001307217.1 93285 D 290402 CDS YP_001307218.1 150014964 5291306 93960..94571 1 NC_009617.1 responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 94571 5291306 Cbei_0072 Clostridium beijerinckii NCIMB 8052 3-methyladenine DNA glycosylase YP_001307218.1 93960 D 290402 CDS YP_001307219.1 150014965 5291307 complement(94951..95916) 1 NC_009617.1 PFAM: glycosyl transferase, family 2; KEGG: gka:GK3091 glycosyltransferase; glycosyl transferase family protein 95916 5291307 Cbei_0073 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001307219.1 94951 R 290402 CDS YP_001307220.1 150014966 5291308 complement(95992..97077) 1 NC_009617.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cac:CAC0277 HD-GYP hydrolase domain containing protein; metal dependent phosphohydrolase 97077 5291308 Cbei_0074 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001307220.1 95992 R 290402 CDS YP_001307221.1 150014967 5291309 97459..98541 1 NC_009617.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 98541 5291309 Cbei_0075 Clostridium beijerinckii NCIMB 8052 phosphoserine aminotransferase YP_001307221.1 97459 D 290402 CDS YP_001307222.1 150014968 5291310 complement(99045..100439) 1 NC_009617.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 100439 asnC 5291310 asnC Clostridium beijerinckii NCIMB 8052 asparaginyl-tRNA synthetase YP_001307222.1 99045 R 290402 CDS YP_001307223.1 150014969 5291311 complement(100772..101470) 1 NC_009617.1 PFAM: metallophosphoesterase; KEGG: cpe:CPE2498 hypothetical protein; metallophosphoesterase 101470 5291311 Cbei_0077 Clostridium beijerinckii NCIMB 8052 metallophosphoesterase YP_001307223.1 100772 R 290402 CDS YP_001307224.1 150014970 5291312 complement(101507..102886) 1 NC_009617.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 102886 murC 5291312 murC Clostridium beijerinckii NCIMB 8052 UDP-N-acetylmuramate--L-alanine ligase YP_001307224.1 101507 R 290402 CDS YP_001307225.1 150014971 5291313 103174..103989 1 NC_009617.1 TIGRFAM: pur operon repressor; PFAM: phosphoribosyltransferase; purine repressor-like; KEGG: cpr:CPR_2501 pur operon repressor; pur operon repressor 103989 5291313 Cbei_0079 Clostridium beijerinckii NCIMB 8052 pur operon repressor YP_001307225.1 103174 D 290402 CDS YP_001307226.1 150014972 5291314 104320..104595 1 NC_009617.1 PFAM: SpoVG family protein; KEGG: cac:CAC3223 stage V sporulation protein G; SpoVG family protein 104595 5291314 Cbei_0080 Clostridium beijerinckii NCIMB 8052 SpoVG family protein YP_001307226.1 104320 D 290402 CDS YP_001307227.1 150014973 5291315 104791..106158 1 NC_009617.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 106158 glmU 5291315 glmU Clostridium beijerinckii NCIMB 8052 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_001307227.1 104791 D 290402 CDS YP_001307228.1 150014974 5291316 106206..107171 1 NC_009617.1 TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; KEGG: cpf:CPF_2812 ribose-phosphate pyrophosphokinase; ribose-phosphate pyrophosphokinase 107171 5291316 Cbei_0082 Clostridium beijerinckii NCIMB 8052 ribose-phosphate pyrophosphokinase YP_001307228.1 106206 D 290402 CDS YP_001307229.1 150014975 5291317 107490..108176 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ctc:CTC00189 transcriptional regulatory protein; two component transcriptional regulator 108176 5291317 Cbei_0083 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001307229.1 107490 D 290402 CDS YP_001307230.1 150014976 5291318 108177..109598 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cno:NT01CX_1017 sensory transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 109598 5291318 Cbei_0084 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001307230.1 108177 D 290402 CDS YP_001307231.1 150014977 5291319 109621..110196 1 NC_009617.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 110196 5291319 Cbei_0085 Clostridium beijerinckii NCIMB 8052 peptidyl-tRNA hydrolase YP_001307231.1 109621 D 290402 CDS YP_001307232.1 150014978 5291320 110211..113711 1 NC_009617.1 TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cpr:CPR_2493 transcription-repair coupling factor; transcription-repair coupling factor 113711 5291320 Cbei_0086 Clostridium beijerinckii NCIMB 8052 transcription-repair coupling factor YP_001307232.1 110211 D 290402 CDS YP_001307233.1 150014979 5291321 113945..115033 1 NC_009617.1 cis/trans isomerase of peptidylprolyl; PPIase; membrane-bound lipoprotein; peptidyl-prolyl isomerase 115033 prsA 5291321 prsA Clostridium beijerinckii NCIMB 8052 peptidyl-prolyl isomerase YP_001307233.1 113945 D 290402 CDS YP_001307234.1 150014980 5291322 115288..115836 1 NC_009617.1 TIGRFAM: transcriptional regulator, AbrB family; Sporulation stage V, protein T; PFAM: SpoVT/AbrB domain protein; KEGG: cpe:CPE2482 stage V sprulation protein T; AbrB family transcriptional regulator 115836 5291322 Cbei_0088 Clostridium beijerinckii NCIMB 8052 AbrB family transcriptional regulator YP_001307234.1 115288 D 290402 CDS YP_001307235.1 150014981 5291323 115932..117467 1 NC_009617.1 PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: ctc:CTC00197 stage V sporulation protein B; polysaccharide biosynthesis protein 117467 5291323 Cbei_0089 Clostridium beijerinckii NCIMB 8052 polysaccharide biosynthesis protein YP_001307235.1 115932 D 290402 CDS YP_001307236.1 150014982 5291324 117485..118936 1 NC_009617.1 TIGRFAM: MazG family protein; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; MazG nucleotide pyrophosphohydrolase; KEGG: cpr:CPR_2489 MazG family protein; MazG family protein 118936 5291324 Cbei_0090 Clostridium beijerinckii NCIMB 8052 MazG family protein YP_001307236.1 117485 D 290402 CDS YP_001307237.1 150014983 5291325 119157..119432 1 NC_009617.1 PFAM: histone family protein DNA-binding protein; KEGG: cac:CAC3211 DNA binding protein HU; histone family protein DNA-binding protein 119432 5291325 Cbei_0091 Clostridium beijerinckii NCIMB 8052 histone family protein DNA-binding protein YP_001307237.1 119157 D 290402 CDS YP_001307238.1 150014984 5291326 119503..119763 1 NC_009617.1 PFAM: RNA-binding S4 domain protein; KEGG: cpf:CPF_2801 S4 domain protein; RNA-binding S4 domain-containing protein 119763 5291326 Cbei_0092 Clostridium beijerinckii NCIMB 8052 RNA-binding S4 domain-containing protein YP_001307238.1 119503 D 290402 CDS YP_001307239.1 150014985 5291327 119967..120260 1 NC_009617.1 PFAM: YabP family protein; KEGG: cno:NT01CX_1027 hypothetical protein; YabP family protein 120260 5291327 Cbei_0093 Clostridium beijerinckii NCIMB 8052 YabP family protein YP_001307239.1 119967 D 290402 CDS YP_001307240.1 150014986 5291328 120270..120662 1 NC_009617.1 TIGRFAM: Spore cortex biosynthesis protein YabQ; KEGG: cpf:CPF_2799 spore cortex biosynthesis protein YabQ; spore cortex biosynthesis protein YabQ 120662 5291328 Cbei_0094 Clostridium beijerinckii NCIMB 8052 spore cortex biosynthesis protein YabQ YP_001307240.1 120270 D 290402 CDS YP_001307241.1 150014987 5291329 120740..121027 1 NC_009617.1 PFAM: Septum formation initiator; KEGG: cpf:CPF_2798 cell division protein FtsL; septum formation initiator 121027 5291329 Cbei_0095 Clostridium beijerinckii NCIMB 8052 septum formation initiator YP_001307241.1 120740 D 290402 CDS YP_001307242.1 150014988 5291330 121177..121587 1 NC_009617.1 PFAM: RNA binding S1 domain protein; KEGG: cpr:CPR_2483 RNA-binding protein; hypothetical protein 121587 5291330 Cbei_0096 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307242.1 121177 D 290402 CDS YP_001307243.1 150014989 5296276 123521..125932 1 NC_009617.1 KEGG: cpf:CPF_2789 stage II sporulation protein E; TIGRFAM: Sporulation stage II, protein E; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; sporulation stage II, protein E 125932 5296276 Cbei_0097 Clostridium beijerinckii NCIMB 8052 sporulation stage II, protein E YP_001307243.1 123521 D 290402 CDS YP_001307244.1 150014990 5291332 126199..127605 1 NC_009617.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: cno:NT01CX_1038 cell cycle protein MesJ; tRNA(Ile)-lysidine synthetase 127605 5291332 Cbei_0098 Clostridium beijerinckii NCIMB 8052 tRNA(Ile)-lysidine synthetase YP_001307244.1 126199 D 290402 CDS YP_001307245.1 150014991 5291333 127608..128147 1 NC_009617.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: cpe:CPE2471 hypoxanthine-guanine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 128147 5291333 Cbei_0099 Clostridium beijerinckii NCIMB 8052 hypoxanthine phosphoribosyltransferase YP_001307245.1 127608 D 290402 CDS YP_001307246.1 150014992 5291334 128222..130030 1 NC_009617.1 KEGG: ctc:CTC00205 cell division protein ftsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; ATP-dependent metalloprotease FtsH 130030 5291334 Cbei_0100 Clostridium beijerinckii NCIMB 8052 ATP-dependent metalloprotease FtsH YP_001307246.1 128222 D 290402 CDS YP_001307247.1 150014993 5291335 130234..131904 1 NC_009617.1 catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase 131904 5291335 Cbei_0101 Clostridium beijerinckii NCIMB 8052 formate--tetrahydrofolate ligase YP_001307247.1 130234 D 290402 CDS YP_001307248.1 150014994 5291336 132096..132896 1 NC_009617.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 132896 5291336 Cbei_0102 Clostridium beijerinckii NCIMB 8052 pantothenate kinase YP_001307248.1 132096 D 290402 CDS YP_001307249.1 150014995 5291337 132946..133911 1 NC_009617.1 TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase, DuS; dihydroorotate dehydrogenase; KEGG: cpr:CPR_2469 dihydrouridine synthase; nifR3 family TIM-barrel protein 133911 5291337 Cbei_0103 Clostridium beijerinckii NCIMB 8052 nifR3 family TIM-barrel protein YP_001307249.1 132946 D 290402 CDS YP_001307250.1 150014996 5291338 134393..134875 1 NC_009617.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 134875 greA 5291338 greA Clostridium beijerinckii NCIMB 8052 transcription elongation factor GreA YP_001307250.1 134393 D 290402 CDS YP_001307251.1 150014997 5291339 134890..136395 1 NC_009617.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 136395 lysS 5291339 lysS Clostridium beijerinckii NCIMB 8052 lysyl-tRNA synthetase YP_001307251.1 134890 D 290402 CDS YP_001307252.1 150014998 5296279 137905..139296 1 NC_009617.1 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase 139296 5296279 Cbei_0106 Clostridium beijerinckii NCIMB 8052 glycyl-tRNA synthetase YP_001307252.1 137905 D 290402 CDS YP_001307253.1 150014999 5291341 139445..140821 1 NC_009617.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 140821 murD 5291341 murD Clostridium beijerinckii NCIMB 8052 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_001307253.1 139445 D 290402 CDS YP_001307254.1 150015000 5291342 complement(140884..141906) 1 NC_009617.1 KEGG: cac:CAC3039 hypothetical secreted protein; hypothetical protein 141906 5291342 Cbei_0108 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307254.1 140884 R 290402 CDS YP_001307255.1 150015001 5296286 148303..149700 1 NC_009617.1 TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: lbr:LVIS_0186 D-xylose proton-symporter; sugar transporter 149700 5296286 Cbei_0109 Clostridium beijerinckii NCIMB 8052 sugar transporter YP_001307255.1 148303 D 290402 CDS YP_001307256.1 150015002 5291344 complement(149740..150687) 1 NC_009617.1 PFAM: Mg2+ transporter protein, CorA family protein; KEGG: cpr:CPR_2452 magnesium and cobalt transporter; Mg2+ transporter protein, CorA family protein 150687 5291344 Cbei_0110 Clostridium beijerinckii NCIMB 8052 Mg2+ transporter protein, CorA family protein YP_001307256.1 149740 R 290402 CDS YP_001307257.1 150015003 5291345 complement(150965..152125) 1 NC_009617.1 KEGG: cpf:CPF_2765 amidohydrolase-like protein; amidohydrolase 152125 5291345 Cbei_0111 Clostridium beijerinckii NCIMB 8052 amidohydrolase YP_001307257.1 150965 R 290402 CDS YP_001307258.1 150015004 5291346 152532..152714 1 NC_009617.1 hypothetical protein 152714 5291346 Cbei_0112 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307258.1 152532 D 290402 CDS YP_001307259.1 150015005 5291347 152764..153405 1 NC_009617.1 PFAM: thymidylate kinase; KEGG: cno:NT01CX_0761 thymidylate kinase; dTMP kinase 153405 5291347 Cbei_0113 Clostridium beijerinckii NCIMB 8052 dTMP kinase YP_001307259.1 152764 D 290402 CDS YP_001307260.1 150015006 5291348 153479..153811 1 NC_009617.1 PFAM: protein of unknown function DUF970; KEGG: cac:CAC0299 protein from nitrogen regulatory protein P-II (GlnB) family, ortholog YAAQ B.subtilis; hypothetical protein 153811 5291348 Cbei_0114 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307260.1 153479 D 290402 CDS YP_001307261.1 150015007 5291349 153831..154763 1 NC_009617.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 154763 5291349 Cbei_0115 Clostridium beijerinckii NCIMB 8052 DNA polymerase III subunit delta' YP_001307261.1 153831 D 290402 CDS YP_001307262.1 150015008 5291350 154767..155672 1 NC_009617.1 PFAM: PSP1 domain protein; KEGG: cpr:CPR_2443 PSP1 domain protein; PSP1 domain-containing protein 155672 5291350 Cbei_0116 Clostridium beijerinckii NCIMB 8052 PSP1 domain-containing protein YP_001307262.1 154767 D 290402 CDS YP_001307263.1 150015009 5291351 155684..155887 1 NC_009617.1 KEGG: cac:CAC0302 predicted metal-binding protein of ferredoxin fold; metal-binding protein of ferredoxin fold 155887 5291351 Cbei_0117 Clostridium beijerinckii NCIMB 8052 metal-binding protein of ferredoxin fold YP_001307263.1 155684 D 290402 CDS YP_001307264.1 150015010 5291352 156010..156180 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cpr:CPR_2442 ferredoxin (FdxA); 4Fe-4S ferredoxin 156180 5291352 Cbei_0118 Clostridium beijerinckii NCIMB 8052 4Fe-4S ferredoxin YP_001307264.1 156010 D 290402 CDS YP_001307265.1 150015011 5291353 complement(156237..156887) 1 NC_009617.1 KEGG: cac:CAC0482 Zn-dependent hydrolase of the metallo-beta-lactamase superfamily; zinc-dependent hydrolase 156887 5291353 Cbei_0119 Clostridium beijerinckii NCIMB 8052 zinc-dependent hydrolase YP_001307265.1 156237 R 290402 CDS YP_001307266.1 150015012 5291354 157057..157512 1 NC_009617.1 PFAM: Firmicute transcriptional repressor of class III stress genes; KEGG: cpf:CPF_2754 transcriptional repressor; transcriptional repressor CtsR 157512 5291354 Cbei_0120 Clostridium beijerinckii NCIMB 8052 transcriptional repressor CtsR YP_001307266.1 157057 D 290402 CDS YP_001307267.1 150015013 5291355 157527..158105 1 NC_009617.1 PFAM: UvrB/UvrC protein; KEGG: cac:CAC3191 uncharacterized conserved protein, containing ClpE-like Zn-zinger domain; YACH B.subtilis ortholog; UvrB/UvrC protein 158105 5291355 Cbei_0121 Clostridium beijerinckii NCIMB 8052 UvrB/UvrC protein YP_001307267.1 157527 D 290402 CDS YP_001307268.1 150015014 5291356 158098..159111 1 NC_009617.1 PFAM: ATP:guanido phosphotransferase; KEGG: cac:CAC3190 arginine kinase related enzyme, YACI B.subtilis ortholog; ATP:guanido phosphotransferase 159111 5291356 Cbei_0122 Clostridium beijerinckii NCIMB 8052 ATP:guanido phosphotransferase YP_001307268.1 158098 D 290402 CDS YP_001307269.1 150015015 5291357 159137..161611 1 NC_009617.1 PFAM: UvrB/UvrC protein; ATPase AAA, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: ATPase AAA; KEGG: ctc:CTC02633 negative regulator of genetic competence mecB/clpC; ATPase 161611 5291357 Cbei_0123 Clostridium beijerinckii NCIMB 8052 ATPase YP_001307269.1 159137 D 290402 CDS YP_001307270.1 150015016 5291358 161742..162677 1 NC_009617.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; HI0933 family protein; KEGG: cpr:CPR_2436 thioredoxin-disulfide reductase; thioredoxin reductase 162677 5291358 Cbei_0124 Clostridium beijerinckii NCIMB 8052 thioredoxin reductase YP_001307270.1 161742 D 290402 CDS YP_001307271.1 150015017 5291359 complement(162753..162980) 1 NC_009617.1 TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin; KEGG: cpr:CPR_2433 glutaredoxin; YruB family glutaredoxin-like protein 162980 5291359 Cbei_0125 Clostridium beijerinckii NCIMB 8052 YruB family glutaredoxin-like protein YP_001307271.1 162753 R 290402 CDS YP_001307272.1 150015018 5291360 163466..164842 1 NC_009617.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 164842 5291360 Cbei_0126 Clostridium beijerinckii NCIMB 8052 DNA repair protein RadA YP_001307272.1 163466 D 290402 CDS YP_001307273.1 150015019 5291361 165081..166145 1 NC_009617.1 non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair; DNA integrity scanning protein DisA 166145 5291361 Cbei_0127 Clostridium beijerinckii NCIMB 8052 DNA integrity scanning protein DisA YP_001307273.1 165081 D 290402 CDS YP_001307274.1 150015020 5291362 166388..167488 1 NC_009617.1 PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein, PINc; KEGG: cpr:CPR_2427 PIN/TRAM domain protein; PilT domain-containing protein 167488 5291362 Cbei_0128 Clostridium beijerinckii NCIMB 8052 PilT domain-containing protein YP_001307274.1 166388 D 290402 CDS YP_001307275.1 150015021 5291363 167510..168190 1 NC_009617.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 168190 ispD 5291363 ispD Clostridium beijerinckii NCIMB 8052 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_001307275.1 167510 D 290402 CDS YP_001307276.1 150015022 5291364 168583..170295 1 NC_009617.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 170295 5291364 Cbei_0130 Clostridium beijerinckii NCIMB 8052 prolyl-tRNA synthetase YP_001307276.1 168583 D 290402 CDS YP_001307277.1 150015023 5291365 170313..171713 1 NC_009617.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 171713 cysS 5291365 cysS Clostridium beijerinckii NCIMB 8052 cysteinyl-tRNA synthetase YP_001307277.1 170313 D 290402 CDS YP_001307278.1 150015024 5291366 171763..172176 1 NC_009617.1 PFAM: ribonuclease III; KEGG: cpe:CPE2426 hypothetical protein; ribonuclease III 172176 5291366 Cbei_0132 Clostridium beijerinckii NCIMB 8052 ribonuclease III YP_001307278.1 171763 D 290402 CDS YP_001307279.1 150015025 5291367 172207..173109 1 NC_009617.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; KEGG: cpr:CPR_2420 RNA methyltransferase, TrmH family, group 3; RNA methyltransferase 173109 5291367 Cbei_0133 Clostridium beijerinckii NCIMB 8052 RNA methyltransferase YP_001307279.1 172207 D 290402 CDS YP_001307280.1 150015026 5291368 173123..173635 1 NC_009617.1 PFAM: protein of unknown function DUF901; KEGG: cpr:CPR_2419 hypothetical protein; hypothetical protein 173635 5291368 Cbei_0134 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307280.1 173123 D 290402 CDS YP_001307281.1 150015027 5291369 173671..174342 1 NC_009617.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 174342 5291369 Cbei_0135 Clostridium beijerinckii NCIMB 8052 RNA polymerase factor sigma-70 YP_001307281.1 173671 D 290402 CDS YP_001307282.1 150015028 5296287 174560..175753 1 NC_009617.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 175753 5296287 Cbei_0136 Clostridium beijerinckii NCIMB 8052 elongation factor Tu YP_001307282.1 174560 D 290402 CDS YP_001307283.1 150015029 5291371 175931..176080 1 NC_009617.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 176080 rpmG 5291371 rpmG Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L33 YP_001307283.1 175931 D 290402 CDS YP_001307284.1 150015030 5291372 176129..176359 1 NC_009617.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 176359 secE 5291372 secE Clostridium beijerinckii NCIMB 8052 preprotein translocase subunit SecE YP_001307284.1 176129 D 290402 CDS YP_001307285.1 150015031 5291373 176373..176918 1 NC_009617.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 176918 nusG 5291373 nusG Clostridium beijerinckii NCIMB 8052 transcription antitermination protein NusG YP_001307285.1 176373 D 290402 CDS YP_001307286.1 150015032 5291374 176997..177422 1 NC_009617.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 177422 rplK 5291374 rplK Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L11 YP_001307286.1 176997 D 290402 CDS YP_001307287.1 150015033 5291375 177477..178166 1 NC_009617.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 178166 rplA 5291375 rplA Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L1 YP_001307287.1 177477 D 290402 CDS YP_001307288.1 150015034 5291376 178369..178872 1 NC_009617.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 178872 rplJ 5291376 rplJ Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L10 YP_001307288.1 178369 D 290402 CDS YP_001307289.1 150015035 5291377 178924..179289 1 NC_009617.1 TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12-like; KEGG: cpr:CPR_2409 ribosomal protein L7/L12; 50S ribosomal protein L7/L12 179289 5291377 Cbei_0143 Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L7/L12 YP_001307289.1 178924 D 290402 CDS YP_001307290.1 150015036 5291378 179620..183330 1 NC_009617.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 183330 rpoB 5291378 rpoB Clostridium beijerinckii NCIMB 8052 DNA-directed RNA polymerase subunit beta YP_001307290.1 179620 D 290402 CDS YP_001307291.1 150015037 5291379 183352..186888 1 NC_009617.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 186888 5291379 Cbei_0145 Clostridium beijerinckii NCIMB 8052 DNA-directed RNA polymerase subunit beta' YP_001307291.1 183352 D 290402 CDS YP_001307292.1 150015038 5291380 187145..187522 1 NC_009617.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 187522 rpsL 5291380 rpsL Clostridium beijerinckii NCIMB 8052 30S ribosomal protein S12 YP_001307292.1 187145 D 290402 CDS YP_001307293.1 150015039 5291381 187672..188142 1 NC_009617.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 188142 5291381 Cbei_0147 Clostridium beijerinckii NCIMB 8052 30S ribosomal protein S7 YP_001307293.1 187672 D 290402 CDS YP_001307294.1 150015040 5291382 188226..190292 1 NC_009617.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 190292 5291382 Cbei_0148 Clostridium beijerinckii NCIMB 8052 elongation factor G YP_001307294.1 188226 D 290402 CDS YP_001307295.1 150015041 5291383 190480..191673 1 NC_009617.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 191673 5291383 Cbei_0149 Clostridium beijerinckii NCIMB 8052 elongation factor Tu YP_001307295.1 190480 D 290402 CDS YP_001307296.1 150015042 5291384 192128..192436 1 NC_009617.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 192436 rpsJ 5291384 rpsJ Clostridium beijerinckii NCIMB 8052 30S ribosomal protein S10 YP_001307296.1 192128 D 290402 CDS YP_001307297.1 150015043 5291385 192509..193138 1 NC_009617.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 193138 rplC 5291385 rplC Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L3 YP_001307297.1 192509 D 290402 CDS YP_001307298.1 150015044 5291386 193165..193785 1 NC_009617.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 193785 rplD 5291386 rplD Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L4 YP_001307298.1 193165 D 290402 CDS YP_001307299.1 150015045 5291387 193785..194081 1 NC_009617.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 194081 rplW 5291387 rplW Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L23 YP_001307299.1 193785 D 290402 CDS YP_001307300.1 150015046 5291388 194146..194979 1 NC_009617.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 194979 rplB 5291388 rplB Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L2 YP_001307300.1 194146 D 290402 CDS YP_001307301.1 150015047 5291389 195045..195317 1 NC_009617.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 195317 rpsS 5291389 rpsS Clostridium beijerinckii NCIMB 8052 30S ribosomal protein S19 YP_001307301.1 195045 D 290402 CDS YP_001307302.1 150015048 5291390 195338..195673 1 NC_009617.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 195673 rplV 5291390 rplV Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L22 YP_001307302.1 195338 D 290402 CDS YP_001307303.1 150015049 5291391 195698..196363 1 NC_009617.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 196363 rpsC 5291391 rpsC Clostridium beijerinckii NCIMB 8052 30S ribosomal protein S3 YP_001307303.1 195698 D 290402 CDS YP_001307304.1 150015050 5291392 196381..196815 1 NC_009617.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 196815 rplP 5291392 rplP Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L16 YP_001307304.1 196381 D 290402 CDS YP_001307305.1 150015051 5291393 196815..197027 1 NC_009617.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 197027 5291393 Cbei_0159 Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L29 YP_001307305.1 196815 D 290402 CDS YP_001307306.1 150015052 5291394 197051..197305 1 NC_009617.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 197305 rpsQ 5291394 rpsQ Clostridium beijerinckii NCIMB 8052 30S ribosomal protein S17 YP_001307306.1 197051 D 290402 CDS YP_001307307.1 150015053 5291395 197334..197702 1 NC_009617.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 197702 rplN 5291395 rplN Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L14 YP_001307307.1 197334 D 290402 CDS YP_001307308.1 150015054 5291396 197718..198032 1 NC_009617.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 198032 rplX 5291396 rplX Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L24 YP_001307308.1 197718 D 290402 CDS YP_001307309.1 150015055 5291397 198055..198594 1 NC_009617.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 198594 rplE 5291397 rplE Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L5 YP_001307309.1 198055 D 290402 CDS YP_001307310.1 150015056 5291398 198611..198796 1 NC_009617.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 198796 rpsN 5291398 rpsN Clostridium beijerinckii NCIMB 8052 30S ribosomal protein S14 YP_001307310.1 198611 D 290402 CDS YP_001307311.1 150015057 5291399 198829..199227 1 NC_009617.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 199227 rpsH 5291399 rpsH Clostridium beijerinckii NCIMB 8052 30S ribosomal protein S8 YP_001307311.1 198829 D 290402 CDS YP_001307312.1 150015058 5291400 199296..199838 1 NC_009617.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 199838 rplF 5291400 rplF Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L6 YP_001307312.1 199296 D 290402 CDS YP_001307313.1 150015059 5291401 199857..200216 1 NC_009617.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 200216 rplR 5291401 rplR Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L18 YP_001307313.1 199857 D 290402 CDS YP_001307314.1 150015060 5291402 200237..200734 1 NC_009617.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 200734 rpsE 5291402 rpsE Clostridium beijerinckii NCIMB 8052 30S ribosomal protein S5 YP_001307314.1 200237 D 290402 CDS YP_001307315.1 150015061 5291403 200747..200926 1 NC_009617.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 200926 rpmD 5291403 rpmD Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L30 YP_001307315.1 200747 D 290402 CDS YP_001307316.1 150015062 5291404 200948..201388 1 NC_009617.1 late assembly protein; 50S ribosomal protein L15 201388 rplO 5291404 rplO Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L15 YP_001307316.1 200948 D 290402 CDS YP_001307317.1 150015063 5291405 201390..202688 1 NC_009617.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 202688 secY 5291405 secY Clostridium beijerinckii NCIMB 8052 preprotein translocase subunit SecY YP_001307317.1 201390 D 290402 CDS YP_001307318.1 150015064 5291406 202714..203364 1 NC_009617.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 203364 adk 5291406 adk Clostridium beijerinckii NCIMB 8052 adenylate kinase YP_001307318.1 202714 D 290402 CDS YP_001307319.1 150015065 5291407 203364..204113 1 NC_009617.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: cpr:CPR_2377 methionine aminopeptidase, type I; methionine aminopeptidase 204113 5291407 Cbei_0173 Clostridium beijerinckii NCIMB 8052 methionine aminopeptidase YP_001307319.1 203364 D 290402 CDS YP_001307320.1 150015066 5291408 204201..204482 1 NC_009617.1 KEGG: cpf:CPF_2691 hypothetical protein; hypothetical protein 204482 5291408 Cbei_0174 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307320.1 204201 D 290402 CDS YP_001307321.1 150015067 5291409 204490..204708 1 NC_009617.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 204708 infA 5291409 infA Clostridium beijerinckii NCIMB 8052 translation initiation factor IF-1 YP_001307321.1 204490 D 290402 CDS YP_001307322.1 150015068 5291410 204763..204876 1 NC_009617.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 204876 rpmJ 5291410 rpmJ Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L36 YP_001307322.1 204763 D 290402 CDS YP_001307323.1 150015069 5291411 205100..205468 1 NC_009617.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 205468 rpsM 5291411 rpsM Clostridium beijerinckii NCIMB 8052 30S ribosomal protein S13 YP_001307323.1 205100 D 290402 CDS YP_001307324.1 150015070 5291412 205484..205879 1 NC_009617.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 205879 5291412 Cbei_0178 Clostridium beijerinckii NCIMB 8052 30S ribosomal protein S11 YP_001307324.1 205484 D 290402 CDS YP_001307325.1 150015071 5291413 205910..206530 1 NC_009617.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 206530 rpsD 5291413 rpsD Clostridium beijerinckii NCIMB 8052 30S ribosomal protein S4 YP_001307325.1 205910 D 290402 CDS YP_001307326.1 150015072 5291414 206633..207580 1 NC_009617.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 207580 5291414 Cbei_0180 Clostridium beijerinckii NCIMB 8052 DNA-directed RNA polymerase subunit alpha YP_001307326.1 206633 D 290402 CDS YP_001307327.1 150015073 5291415 207593..207934 1 NC_009617.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 207934 rplQ 5291415 rplQ Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L17 YP_001307327.1 207593 D 290402 CDS YP_001307328.1 150015074 5291416 208168..209019 1 NC_009617.1 with CbiNQ forms the ABC transporter for cobalt import; Mycoplasmas have two adjacent copies of this gene; cobalt transporter ATP-binding subunit 209019 5291416 Cbei_0182 Clostridium beijerinckii NCIMB 8052 cobalt transporter ATP-binding subunit YP_001307328.1 208168 D 290402 CDS YP_001307329.1 150015075 5291417 209004..209873 1 NC_009617.1 with CbiNQ forms the ABC transporter for cobalt import; Clostridia have two adjacent copies of this gene; cobalt transporter ATP-binding subunit 209873 cbiO 5291417 cbiO Clostridium beijerinckii NCIMB 8052 cobalt transporter ATP-binding subunit YP_001307329.1 209004 D 290402 CDS YP_001307330.1 150015076 5291418 209882..210688 1 NC_009617.1 PFAM: cobalt transport protein; KEGG: cpf:CPF_2681 cobalt ABC transporter permease; cobalt transport protein 210688 5291418 Cbei_0184 Clostridium beijerinckii NCIMB 8052 cobalt transport protein YP_001307330.1 209882 D 290402 CDS YP_001307331.1 150015077 5291419 210705..211439 1 NC_009617.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 211439 truA 5291419 truA Clostridium beijerinckii NCIMB 8052 tRNA pseudouridine synthase A YP_001307331.1 210705 D 290402 CDS YP_001307332.1 150015078 5291420 211600..212034 1 NC_009617.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 212034 rplM 5291420 rplM Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L13 YP_001307332.1 211600 D 290402 CDS YP_001307333.1 150015079 5291421 212061..212453 1 NC_009617.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 212453 rpsI 5291421 rpsI Clostridium beijerinckii NCIMB 8052 30S ribosomal protein S9 YP_001307333.1 212061 D 290402 CDS YP_001307334.1 150015080 5291422 212974..213636 1 NC_009617.1 TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD; PFAM: cell wall hydrolase/autolysin; KEGG: cpr:CPR_2361 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase CwlD 213636 5291422 Cbei_0188 Clostridium beijerinckii NCIMB 8052 N-acetylmuramoyl-L-alanine amidase CwlD YP_001307334.1 212974 D 290402 CDS YP_001307335.1 150015081 5291423 214215..215057 1 NC_009617.1 Catalyzes the reversible hydration of fumaric acid to yield I-malic acid; fumarate hydratase 215057 5291423 Cbei_0189 Clostridium beijerinckii NCIMB 8052 fumarate hydratase YP_001307335.1 214215 D 290402 CDS YP_001307336.1 150015082 5291424 215262..215819 1 NC_009617.1 Catalyzes the reversible hydration of fumaric acid to yield l-malic acid; fumarate hydratase 215819 5291424 Cbei_0190 Clostridium beijerinckii NCIMB 8052 fumarate hydratase YP_001307336.1 215262 D 290402 CDS YP_001307337.1 150015083 5291425 215860..216621 1 NC_009617.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: cno:NT01CX_0444 TPR domain protein; hypothetical protein 216621 5291425 Cbei_0191 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307337.1 215860 D 290402 CDS YP_001307338.1 150015084 5291426 216687..217379 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cpf:CPF_2674 DNA-binding response regulator; two component transcriptional regulator 217379 5291426 Cbei_0192 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001307338.1 216687 D 290402 CDS YP_001307339.1 150015085 5291427 217546..218706 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cpr:CPR_2358 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 218706 5291427 Cbei_0193 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001307339.1 217546 D 290402 CDS YP_001307340.1 150015086 5291428 218903..221134 1 NC_009617.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 221134 5291428 Cbei_0194 Clostridium beijerinckii NCIMB 8052 ribonucleotide-diphosphate reductase subunit alpha YP_001307340.1 218903 D 290402 CDS YP_001307341.1 150015087 5291429 221388..222422 1 NC_009617.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 222422 nrdF 5291429 nrdF Clostridium beijerinckii NCIMB 8052 ribonucleotide-diphosphate reductase subunit beta YP_001307341.1 221388 D 290402 CDS YP_001307342.1 150015088 5291430 222653..224272 1 NC_009617.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein, mobile region; PEP-utilising protein domain protein; KEGG: cpe:CPE2357 phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase 224272 5291430 Cbei_0196 Clostridium beijerinckii NCIMB 8052 phosphoenolpyruvate-protein phosphotransferase YP_001307342.1 222653 D 290402 CDS YP_001307343.1 150015089 5291431 224417..225682 1 NC_009617.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cno:NT01CX_1157 TPR-repeat-containing protein; hypothetical protein 225682 5291431 Cbei_0197 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307343.1 224417 D 290402 CDS YP_001307344.1 150015090 5291432 225844..227019 1 NC_009617.1 TIGRFAM: isoaspartyl dipeptidase; PFAM: amidohydrolase; KEGG: cpf:CPF_2665 isoaspartyl dipeptidase; isoaspartyl dipeptidase 227019 5291432 Cbei_0198 Clostridium beijerinckii NCIMB 8052 isoaspartyl dipeptidase YP_001307344.1 225844 D 290402 CDS YP_001307345.1 150015091 5291433 complement(227090..227695) 1 NC_009617.1 PFAM: cell wall hydrolase, SleB; KEGG: cpr:CPR_2348 spore-cortex-lytic enzyme; cell wall hydrolase SleB 227695 5291433 Cbei_0199 Clostridium beijerinckii NCIMB 8052 cell wall hydrolase SleB YP_001307345.1 227090 R 290402 CDS YP_001307346.1 150015092 5291434 227940..228788 1 NC_009617.1 PFAM: protein of unknown function DUF147; KEGG: cpr:CPR_2346 conserved hypothetical protein TIGR00159; hypothetical protein 228788 5291434 Cbei_0200 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307346.1 227940 D 290402 CDS YP_001307347.1 150015093 5291435 228761..229981 1 NC_009617.1 PFAM: YbbR family protein; KEGG: cpr:CPR_2345 hypothetical protein; hypothetical protein 229981 5291435 Cbei_0201 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307347.1 228761 D 290402 CDS YP_001307348.1 150015094 5291436 230153..231754 1 NC_009617.1 PFAM: HI0933 family protein; KEGG: cpf:CPF_2658 hypothetical protein; hypothetical protein 231754 5291436 Cbei_0202 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307348.1 230153 D 290402 CDS YP_001307349.1 150015095 5291437 232027..232935 1 NC_009617.1 catalyzes the synthesis of butanoylphosphate from butanoyl-CoA and inorganic phosphate; phosphate butyryltransferase 232935 5291437 Cbei_0203 Clostridium beijerinckii NCIMB 8052 phosphate butyryltransferase YP_001307349.1 232027 D 290402 CDS YP_001307350.1 150015096 5291438 233080..234147 1 NC_009617.1 catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase 234147 5291438 Cbei_0204 Clostridium beijerinckii NCIMB 8052 butyrate kinase YP_001307350.1 233080 D 290402 CDS YP_001307351.1 150015097 5291439 234292..234765 1 NC_009617.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cpr:CPR_1097 HDIG/HD domain protein; metal dependent phosphohydrolase 234765 5291439 Cbei_0205 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001307351.1 234292 D 290402 CDS YP_001307352.1 150015098 5291440 234782..235591 1 NC_009617.1 TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS; KEGG: cpe:CPE1021 dihydropteroate synthase; dihydropteroate synthase 235591 5291440 Cbei_0206 Clostridium beijerinckii NCIMB 8052 dihydropteroate synthase YP_001307352.1 234782 D 290402 CDS YP_001307353.1 150015099 5291441 235604..236428 1 NC_009617.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; dihydroneopterin aldolase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: cpf:CPF_1277 dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 236428 5291441 Cbei_0207 Clostridium beijerinckii NCIMB 8052 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_001307353.1 235604 D 290402 CDS YP_001307354.1 150015100 5291442 236467..237303 1 NC_009617.1 PFAM: protein of unknown function DUF124; KEGG: cpf:CPF_2644 hypothetical protein; hypothetical protein 237303 5291442 Cbei_0208 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307354.1 236467 D 290402 CDS YP_001307355.1 150015101 5291443 237444..237797 1 NC_009617.1 TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor; KEGG: cpr:CPR_2329 TrpR-like protein YerC/YecD; TrpR-like protein YerC/YecD 237797 5291443 Cbei_0209 Clostridium beijerinckii NCIMB 8052 TrpR-like protein YerC/YecD YP_001307355.1 237444 D 290402 CDS YP_001307356.1 150015102 5291444 238013..239359 1 NC_009617.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 239359 glmM 5291444 glmM Clostridium beijerinckii NCIMB 8052 phosphoglucosamine mutase YP_001307356.1 238013 D 290402 CDS YP_001307357.1 150015103 5291445 239587..240012 1 NC_009617.1 KEGG: cpr:CPR_2064 hypothetical protein; hypothetical protein 240012 5291445 Cbei_0211 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307357.1 239587 D 290402 CDS YP_001307358.1 150015104 5291446 240552..241061 1 NC_009617.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: mbu:Mbur_0709 acetolactate synthase, small subunit; acetolactate synthase small subunit 241061 5291446 Cbei_0212 Clostridium beijerinckii NCIMB 8052 acetolactate synthase small subunit YP_001307358.1 240552 D 290402 CDS YP_001307359.1 150015105 5291447 241127..242722 1 NC_009617.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: cth:Cthe_2519 2-isopropylmalate synthase/homocitrate synthase family protein; alpha-isopropylmalate/homocitrate synthase family transferase 242722 5291447 Cbei_0213 Clostridium beijerinckii NCIMB 8052 alpha-isopropylmalate/homocitrate synthase family transferase YP_001307359.1 241127 D 290402 CDS YP_001307360.1 150015106 5291448 242736..243995 1 NC_009617.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit 243995 5291448 Cbei_0214 Clostridium beijerinckii NCIMB 8052 3-isopropylmalate dehydratase large subunit YP_001307360.1 242736 D 290402 CDS YP_001307361.1 150015107 5291449 244009..244494 1 NC_009617.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase small subunit 244494 leuD 5291449 leuD Clostridium beijerinckii NCIMB 8052 3-isopropylmalate dehydratase small subunit YP_001307361.1 244009 D 290402 CDS YP_001307362.1 150015108 5291450 244634..245716 1 NC_009617.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 245716 5291450 Cbei_0216 Clostridium beijerinckii NCIMB 8052 3-isopropylmalate dehydrogenase YP_001307362.1 244634 D 290402 CDS YP_001307363.1 150015109 5291451 245786..247459 1 NC_009617.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein, central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: cth:Cthe_2714 acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit 247459 5291451 Cbei_0217 Clostridium beijerinckii NCIMB 8052 acetolactate synthase large subunit YP_001307363.1 245786 D 290402 CDS YP_001307364.1 150015110 5291452 247472..248476 1 NC_009617.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 248476 5291452 Cbei_0218 Clostridium beijerinckii NCIMB 8052 ketol-acid reductoisomerase YP_001307364.1 247472 D 290402 CDS YP_001307365.1 150015111 5291453 249021..251945 1 NC_009617.1 PFAM: sigma-54 factor, interaction domain-containing protein; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PTS system fructose subfamily IIA component; PRD domain protein; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; KEGG: tte:TTE0180 NtrC family transcriptional regulator, ATPase domain; sigma-54 factor interaction domain-containing protein 251945 5291453 Cbei_0219 Clostridium beijerinckii NCIMB 8052 sigma-54 factor interaction domain-containing protein YP_001307365.1 249021 D 290402 CDS YP_001307366.1 150015112 5291454 252039..252506 1 NC_009617.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: tte:TTE0181 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 252506 5291454 Cbei_0220 Clostridium beijerinckii NCIMB 8052 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_001307366.1 252039 D 290402 CDS YP_001307367.1 150015113 5291455 252522..252800 1 NC_009617.1 PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: lwe:lwe2615 PTS system, galactitol-specific, IIB component; phosphotransferase system, lactose/cellobiose-specific IIB subunit 252800 5291455 Cbei_0221 Clostridium beijerinckii NCIMB 8052 phosphotransferase system, lactose/cellobiose-specific IIB subunit YP_001307367.1 252522 D 290402 CDS YP_001307368.1 150015114 5291456 252876..254150 1 NC_009617.1 TIGRFAM: PTS system, galactitol-specific IIC subunit; PFAM: PTS system Galactitol-specific IIC component; KEGG: lwe:lwe2614 PTS system, galactitol-specific, IIC component; PTS system galactitol-specific transporter subunit IIC 254150 5291456 Cbei_0222 Clostridium beijerinckii NCIMB 8052 PTS system galactitol-specific transporter subunit IIC YP_001307368.1 252876 D 290402 CDS YP_001307369.1 150015115 5291457 254220..255251 1 NC_009617.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: lmo:lmo2663 polyol dehydrogenase; alcohol dehydrogenase 255251 5291457 Cbei_0223 Clostridium beijerinckii NCIMB 8052 alcohol dehydrogenase YP_001307369.1 254220 D 290402 CDS YP_001307370.1 150015116 5291458 255275..256093 1 NC_009617.1 PFAM: Transketolase domain protein; KEGG: cpf:CPF_0292 transketolase, N-terminal subunit; transketolase domain-containing protein 256093 5291458 Cbei_0224 Clostridium beijerinckii NCIMB 8052 transketolase domain-containing protein YP_001307370.1 255275 D 290402 CDS YP_001307371.1 150015117 5291459 256093..257013 1 NC_009617.1 PFAM: Transketolase, central region; Transketolase domain protein; KEGG: cpr:CPR_0288 transketolase; transketolase, central region 257013 5291459 Cbei_0225 Clostridium beijerinckii NCIMB 8052 transketolase, central region YP_001307371.1 256093 D 290402 CDS YP_001307372.1 150015118 5291460 257057..257728 1 NC_009617.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: tte:TTE1498 Pentose-5-phosphate-3-epimerase; ribulose-phosphate 3-epimerase 257728 5291460 Cbei_0226 Clostridium beijerinckii NCIMB 8052 ribulose-phosphate 3-epimerase YP_001307372.1 257057 D 290402 CDS YP_001307373.1 150015119 5291461 257842..258291 1 NC_009617.1 TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; KEGG: lin:lin2811 similar to ribose 5-phosphate epimerase; RpiB/LacA/LacB family sugar-phosphate isomerase 258291 5291461 Cbei_0227 Clostridium beijerinckii NCIMB 8052 RpiB/LacA/LacB family sugar-phosphate isomerase YP_001307373.1 257842 D 290402 CDS YP_001307374.1 150015120 5291462 258399..259928 1 NC_009617.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: lwe:lwe1891 phosphoglucomutase/phosphomannomutase family protein; phosphomannomutase 259928 5291462 Cbei_0228 Clostridium beijerinckii NCIMB 8052 phosphomannomutase YP_001307374.1 258399 D 290402 CDS YP_001307375.1 150015121 5291463 260139..260402 1 NC_009617.1 PFAM: Excinuclease ABC, C subunit domain protein; KEGG: cpe:CPE1444 endonuclease; excinuclease ABC subunit C 260402 5291463 Cbei_0229 Clostridium beijerinckii NCIMB 8052 excinuclease ABC subunit C YP_001307375.1 260139 D 290402 CDS YP_001307376.1 150015122 5291464 260772..262085 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 1; KEGG: cno:NT01CX_0965 hypothetical ABC transporter extracellular binding protein; extracellular solute-binding protein 262085 5291464 Cbei_0230 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001307376.1 260772 D 290402 CDS YP_001307377.1 150015123 5291465 262194..263060 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB2569 multiple sugar-binding transport system permease; binding-protein-dependent transport system inner membrane protein 263060 5291465 Cbei_0231 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001307377.1 262194 D 290402 CDS YP_001307378.1 150015124 5291466 263060..263959 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cno:NT01CX_0967 sugar ABC transporter permease; binding-protein-dependent transport system inner membrane protein 263959 5291466 Cbei_0232 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001307378.1 263060 D 290402 CDS YP_001307379.1 150015125 5291467 264114..265604 1 NC_009617.1 amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 265604 5291467 Cbei_0233 Clostridium beijerinckii NCIMB 8052 4-alpha-glucanotransferase YP_001307379.1 264114 D 290402 CDS YP_001307380.1 150015126 5291468 265991..266992 1 NC_009617.1 PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: cpe:CPE0417 probable transcriptional regulator; alanine racemase 266992 5291468 Cbei_0234 Clostridium beijerinckii NCIMB 8052 alanine racemase YP_001307380.1 265991 D 290402 CDS YP_001307381.1 150015127 5291469 267230..268435 1 NC_009617.1 KEGG: ctc:CTC00542 encapsulation protein CapA; encapsulation protein CapA 268435 5291469 Cbei_0235 Clostridium beijerinckii NCIMB 8052 encapsulation protein CapA YP_001307381.1 267230 D 290402 CDS YP_001307382.1 150015128 5291470 268865..270301 1 NC_009617.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dsy:DSY3620 hypothetical protein; RND family efflux transporter MFP subunit 270301 5291470 Cbei_0236 Clostridium beijerinckii NCIMB 8052 RND family efflux transporter MFP subunit YP_001307382.1 268865 D 290402 CDS YP_001307383.1 150015129 5291471 270307..271044 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY3619 hypothetical protein; ABC transporter 271044 5291471 Cbei_0237 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001307383.1 270307 D 290402 CDS YP_001307384.1 150015130 5291472 271035..272306 1 NC_009617.1 PFAM: protein of unknown function DUF214; KEGG: dsy:DSY3618 hypothetical protein; hypothetical protein 272306 5291472 Cbei_0238 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307384.1 271035 D 290402 CDS YP_001307385.1 150015131 5291473 272922..274070 1 NC_009617.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: cac:CAC0390 cystathionine gamma-synthase; cystathionine gamma-synthase 274070 5291473 Cbei_0239 Clostridium beijerinckii NCIMB 8052 cystathionine gamma-synthase YP_001307385.1 272922 D 290402 CDS YP_001307386.1 150015132 5291474 274105..275241 1 NC_009617.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: cac:CAC0391 cystathionine beta-lyase; cystathionine gamma-synthase 275241 5291474 Cbei_0240 Clostridium beijerinckii NCIMB 8052 cystathionine gamma-synthase YP_001307386.1 274105 D 290402 CDS YP_001307387.1 150015133 5291475 complement(275427..275912) 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: cpr:CPR_0493 transcriptional regulator, MarR family; MarR family transcriptional regulator 275912 5291475 Cbei_0241 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001307387.1 275427 R 290402 CDS YP_001307388.1 150015134 5291476 276262..277668 1 NC_009617.1 TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphotransferase system, EIIC; phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: cac:CAC0154 PTS system, mannitol-specific IIBC component (gene MtlA); PTS system mannitol-specific transporter subunit IIC 277668 5291476 Cbei_0242 Clostridium beijerinckii NCIMB 8052 PTS system mannitol-specific transporter subunit IIC YP_001307388.1 276262 D 290402 CDS YP_001307389.1 150015135 5291477 278207..280258 1 NC_009617.1 PFAM: PRD domain protein; KEGG: cac:CAC0155 regulator of the PTS system for mannitol (gene MltR); transcriptional antiterminator BglG 280258 5291477 Cbei_0243 Clostridium beijerinckii NCIMB 8052 transcriptional antiterminator BglG YP_001307389.1 278207 D 290402 CDS YP_001307390.1 150015136 5291478 280258..280698 1 NC_009617.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: cac:CAC0156 PTS system, mannitol-specific IIA domain (Ntr-type) (gene MltF); phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 280698 5291478 Cbei_0244 Clostridium beijerinckii NCIMB 8052 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YP_001307390.1 280258 D 290402 CDS YP_001307391.1 150015137 5291479 280700..281845 1 NC_009617.1 PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain; KEGG: spt:SPA3538 mannitol-1-phosphate dehydrogenase; mannitol dehydrogenase domain-containing protein 281845 5291479 Cbei_0245 Clostridium beijerinckii NCIMB 8052 mannitol dehydrogenase domain-containing protein YP_001307391.1 280700 D 290402 CDS YP_001307392.1 150015138 5291480 282511..284337 1 NC_009617.1 TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase, class-II; sugar isomerase (SIS); KEGG: cpe:CPE2327 glutamine-fructose-6-phosphate transaminase; glucosamine--fructose-6-phosphate aminotransferase 284337 5291480 Cbei_0246 Clostridium beijerinckii NCIMB 8052 glucosamine--fructose-6-phosphate aminotransferase YP_001307392.1 282511 D 290402 CDS YP_001307393.1 150015139 5291481 285666..286319 1 NC_009617.1 TIGRFAM: serine O-acetyltransferase; KEGG: mta:Moth_2485 serine O-acetyltransferase; serine O-acetyltransferase 286319 5291481 Cbei_0247 Clostridium beijerinckii NCIMB 8052 serine O-acetyltransferase YP_001307393.1 285666 D 290402 CDS YP_001307394.1 150015140 5291482 286746..287459 1 NC_009617.1 PFAM: Thioesterase; KEGG: bcz:BCZK1713 thioesterase; oleoyl-(acyl-carrier-protein) hydrolase 287459 5291482 Cbei_0248 Clostridium beijerinckii NCIMB 8052 oleoyl-(acyl-carrier-protein) hydrolase YP_001307394.1 286746 D 290402 CDS YP_001307395.1 150015141 5291483 287536..288549 1 NC_009617.1 KEGG: bat:BAS2541 hypothetical protein; hypothetical protein 288549 5291483 Cbei_0249 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307395.1 287536 D 290402 CDS YP_001307396.1 150015142 5291484 288600..300704 1 NC_009617.1 TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Non-ribosomal peptide synthetase; KEGG: bat:BAS2540 AMP-binding enzyme; amino acid adenylation domain-containing protein 300704 5291484 Cbei_0250 Clostridium beijerinckii NCIMB 8052 amino acid adenylation domain-containing protein YP_001307396.1 288600 D 290402 CDS YP_001307397.1 150015143 5291485 300965..304642 1 NC_009617.1 PFAM: condensation domain protein; phosphopantetheine-binding; Beta-ketoacyl synthase-like; KEGG: smu:SMU.1343c polyketide synthase; erythronolide synthase 304642 5291485 Cbei_0251 Clostridium beijerinckii NCIMB 8052 erythronolide synthase YP_001307397.1 300965 D 290402 CDS YP_001307398.1 150015144 5291486 304777..306954 1 NC_009617.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; phosphopantetheine-binding; Male sterility C-terminal domain; KEGG: smu:SMU.1339 bacitracin synthetase; hypothetical protein 306954 5291486 Cbei_0252 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307398.1 304777 D 290402 CDS YP_001307399.1 150015145 5291487 307058..308176 1 NC_009617.1 PFAM: peptidase U32; KEGG: mja:MJ1657 hypothetical protein; peptidase U32 308176 5291487 Cbei_0253 Clostridium beijerinckii NCIMB 8052 peptidase U32 YP_001307399.1 307058 D 290402 CDS YP_001307400.1 150015146 5291488 308234..309694 1 NC_009617.1 PFAM: AMP-dependent synthetase and ligase; KEGG: vch:VC0249 RfbL protein; AMP-dependent synthetase and ligase 309694 5291488 Cbei_0254 Clostridium beijerinckii NCIMB 8052 AMP-dependent synthetase and ligase YP_001307400.1 308234 D 290402 CDS YP_001307401.1 150015147 5291489 309974..310747 1 NC_009617.1 PFAM: BAAT/Acyl-CoA thioester hydrolase-like; KEGG: cac:CAC3407 acyl-CoA thioesterase 1; BAAT/Acyl-CoA thioester hydrolase-like protein 310747 5291489 Cbei_0255 Clostridium beijerinckii NCIMB 8052 BAAT/Acyl-CoA thioester hydrolase-like protein YP_001307401.1 309974 D 290402 CDS YP_001307402.1 150015148 5291490 310972..311670 1 NC_009617.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: cth:Cthe_0737 phosphopantethiene-protein transferase; 4'-phosphopantetheinyl transferase 311670 5291490 Cbei_0256 Clostridium beijerinckii NCIMB 8052 4'-phosphopantetheinyl transferase YP_001307402.1 310972 D 290402 CDS YP_001307403.1 150015149 5291491 311848..313116 1 NC_009617.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: cac:CAC3575 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 313116 5291491 Cbei_0257 Clostridium beijerinckii NCIMB 8052 malonyl CoA-acyl carrier protein transacylase YP_001307403.1 311848 D 290402 CDS YP_001307404.1 150015150 5296288 complement(314078..314692) 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: smu:SMU.134 transcriptional regulator (TetR/AcrR family); TetR family transcriptional regulator 314692 5296288 Cbei_0259 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001307404.1 314078 R 290402 CDS YP_001307405.1 150015151 5291493 314846..316297 1 NC_009617.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: chy:CHY_0588 drug resistance transporter EmrB/QacA family protein; EmrB/QacA family drug resistance transporter 316297 5291493 Cbei_0260 Clostridium beijerinckii NCIMB 8052 EmrB/QacA family drug resistance transporter YP_001307405.1 314846 D 290402 CDS YP_001307406.1 150015152 5291494 316679..318118 1 NC_009617.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dsy:DSY3620 hypothetical protein; RND family efflux transporter MFP subunit 318118 5291494 Cbei_0261 Clostridium beijerinckii NCIMB 8052 RND family efflux transporter MFP subunit YP_001307406.1 316679 D 290402 CDS YP_001307407.1 150015153 5291495 318130..318828 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY3669 hypothetical protein; ABC transporter 318828 5291495 Cbei_0262 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001307407.1 318130 D 290402 CDS YP_001307408.1 150015154 5291496 318869..321079 1 NC_009617.1 PFAM: protein of unknown function DUF214; KEGG: cac:CAC1534 predicted permease; hypothetical protein 321079 5291496 Cbei_0263 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307408.1 318869 D 290402 CDS YP_001307409.1 150015155 5291497 321201..321362 1 NC_009617.1 hypothetical protein 321362 5291497 Cbei_0264 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307409.1 321201 D 290402 CDS YP_001307410.1 150015156 5291498 321510..321644 1 NC_009617.1 hypothetical protein 321644 5291498 Cbei_0265 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307410.1 321510 D 290402 CDS YP_001307411.1 150015157 5291499 321631..321885 1 NC_009617.1 hypothetical protein 321885 5291499 Cbei_0266 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307411.1 321631 D 290402 CDS YP_001307412.1 150015158 5291500 322475..323302 1 NC_009617.1 PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: fnu:FN0219 autolysin response regulator; LytTR family two component transcriptional regulator 323302 5291500 Cbei_0267 Clostridium beijerinckii NCIMB 8052 LytTR family two component transcriptional regulator YP_001307412.1 322475 D 290402 CDS YP_001307413.1 150015159 5291501 323292..324539 1 NC_009617.1 KEGG: dsy:DSY2529 hypothetical protein; signal transduction histidine kinase regulating citrate/malate metabolism 324539 5291501 Cbei_0268 Clostridium beijerinckii NCIMB 8052 signal transduction histidine kinase regulating citrate/malate metabolism YP_001307413.1 323292 D 290402 CDS YP_001307414.1 150015160 5291502 complement(324594..325196) 1 NC_009617.1 PFAM: Accessory gene regulator B; KEGG: cth:Cthe_2358 accessory gene regulator B; accessory gene regulator B 325196 5291502 Cbei_0269 Clostridium beijerinckii NCIMB 8052 accessory gene regulator B YP_001307414.1 324594 R 290402 CDS YP_001307415.1 150015161 5296289 complement(326930..327541) 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: bce:BC4570 transcriptional regulator, TetR family; TetR family transcriptional regulator 327541 5296289 Cbei_0271 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001307415.1 326930 R 290402 CDS YP_001307416.1 150015162 5291504 327671..328876 1 NC_009617.1 KEGG: cac:CAC3402 dipeptidyl aminopeptidase/acylaminoacyl-peptidase related protein; dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein 328876 5291504 Cbei_0272 Clostridium beijerinckii NCIMB 8052 dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein YP_001307416.1 327671 D 290402 CDS YP_001307417.1 150015163 5291505 328919..329467 1 NC_009617.1 PFAM: NADPH-dependent FMN reductase; KEGG: cac:CAC3495 multimeric flavodoxin WrbA family protein; NADPH-dependent FMN reductase 329467 5291505 Cbei_0273 Clostridium beijerinckii NCIMB 8052 NADPH-dependent FMN reductase YP_001307417.1 328919 D 290402 CDS YP_001307418.1 150015164 5291506 complement(329683..331002) 1 NC_009617.1 PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC0161 ABC transporter (permease); major facilitator superfamily transporter 331002 5291506 Cbei_0274 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001307418.1 329683 R 290402 CDS YP_001307419.1 150015165 5291507 complement(331035..331430) 1 NC_009617.1 PFAM: regulatory protein, MarR; iron dependent repressor; KEGG: dsy:DSY3767 hypothetical protein; iron dependent repressor 331430 5291507 Cbei_0275 Clostridium beijerinckii NCIMB 8052 iron dependent repressor YP_001307419.1 331035 R 290402 CDS YP_001307420.1 150015166 5291508 complement(332155..332628) 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: cac:CAC0162 transcriptional regulator MarR/EmrR family; MarR family transcriptional regulator 332628 5291508 Cbei_0276 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001307420.1 332155 R 290402 CDS YP_001307421.1 150015167 5291509 complement(332858..333436) 1 NC_009617.1 PFAM: cyclase family protein; KEGG: ctc:CTC01896 polyketide cyclase; cyclase family protein 333436 5291509 Cbei_0277 Clostridium beijerinckii NCIMB 8052 cyclase family protein YP_001307421.1 332858 R 290402 CDS YP_001307422.1 150015168 5291510 333631..334092 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: bat:BAS0708 transcriptional regulator, MarR family; MarR family transcriptional regulator 334092 5291510 Cbei_0278 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001307422.1 333631 D 290402 CDS YP_001307423.1 150015169 5291511 334109..334639 1 NC_009617.1 PFAM: chemotaxis sensory transducer; KEGG: bca:BCE_5181 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 334639 5291511 Cbei_0279 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001307423.1 334109 D 290402 CDS YP_001307424.1 150015170 5291512 335111..335536 1 NC_009617.1 hypothetical protein 335536 5291512 Cbei_0280 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307424.1 335111 D 290402 CDS YP_001307425.1 150015171 5291513 335615..336412 1 NC_009617.1 KEGG: cpr:CPR_0050 hypothetical protein; hypothetical protein 336412 5291513 Cbei_0281 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307425.1 335615 D 290402 CDS YP_001307426.1 150015172 5291514 336442..337140 1 NC_009617.1 KEGG: cpr:CPR_0051 hypothetical protein; hypothetical protein 337140 5291514 Cbei_0282 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307426.1 336442 D 290402 CDS YP_001307427.1 150015173 5291515 337152..337787 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cth:Cthe_2290 ABC transporter protein; ABC transporter 337787 5291515 Cbei_0283 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001307427.1 337152 D 290402 CDS YP_001307428.1 150015174 5291516 337777..338484 1 NC_009617.1 hypothetical protein 338484 5291516 Cbei_0284 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307428.1 337777 D 290402 CDS YP_001307429.1 150015175 5291517 338773..341034 1 NC_009617.1 TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase, family 35; KEGG: spd:SPD_1932 maltodextrin phosphorylase; glycogen/starch/alpha-glucan phosphorylase 341034 5291517 Cbei_0285 Clostridium beijerinckii NCIMB 8052 glycogen/starch/alpha-glucan phosphorylase YP_001307429.1 338773 D 290402 CDS YP_001307430.1 150015176 5291518 complement(341168..341839) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: btl:BALH_2808 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 341839 5291518 Cbei_0286 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001307430.1 341168 R 290402 CDS YP_001307431.1 150015177 5291519 342176..344179 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: cac:CAC2547 possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain; methyl-accepting chemotaxis sensory transducer 344179 5291519 Cbei_0287 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001307431.1 342176 D 290402 CDS YP_001307432.1 150015178 5291520 344332..344919 1 NC_009617.1 PFAM: Rubrerythrin; KEGG: cpf:CPF_0133 rubrerythrin; rubrerythrin 344919 5291520 Cbei_0288 Clostridium beijerinckii NCIMB 8052 rubrerythrin YP_001307432.1 344332 D 290402 CDS YP_001307433.1 150015179 5291521 345077..345493 1 NC_009617.1 KEGG: cpr:CPR_1932 hypothetical protein; hypothetical protein 345493 5291521 Cbei_0289 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307433.1 345077 D 290402 CDS YP_001307434.1 150015180 5291522 complement(345579..346196) 1 NC_009617.1 PFAM: protein of unknown function DUF886; KEGG: ctc:CTC00834 hypothetical protein; hypothetical protein 346196 5291522 Cbei_0290 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307434.1 345579 R 290402 CDS YP_001307435.1 150015181 5291523 346478..347068 1 NC_009617.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: cpr:CPR_2319 5-formyltetrahydrofolate cyclo-ligase family protein; 5-formyltetrahydrofolate cyclo-ligase 347068 5291523 Cbei_0291 Clostridium beijerinckii NCIMB 8052 5-formyltetrahydrofolate cyclo-ligase YP_001307435.1 346478 D 290402 CDS YP_001307436.1 150015182 5291524 347103..349712 1 NC_009617.1 KEGG: cpf:CPF_0202 hypothetical protein; hypothetical protein 349712 5291524 Cbei_0292 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307436.1 347103 D 290402 CDS YP_001307437.1 150015183 5291525 complement(349863..351794) 1 NC_009617.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 351794 thrS 5291525 thrS Clostridium beijerinckii NCIMB 8052 threonyl-tRNA synthetase YP_001307437.1 349863 R 290402 CDS YP_001307438.1 150015184 5291526 352392..354869 1 NC_009617.1 PFAM: chemotaxis sensory transducer; KEGG: ctc:CTC00924 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 354869 5291526 Cbei_0294 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001307438.1 352392 D 290402 CDS YP_001307439.1 150015185 5296291 complement(355244..355648) 1 NC_009617.1 KEGG: cpr:CPR_2310 hypothetical protein; hypothetical protein 355648 5296291 Cbei_0295 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307439.1 355244 R 290402 CDS YP_001307440.1 150015186 5291528 355919..356674 1 NC_009617.1 KEGG: cpr:CPR_2309 hypothetical protein; hypothetical protein 356674 5291528 Cbei_0296 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307440.1 355919 D 290402 CDS YP_001307441.1 150015187 5291529 complement(356778..357254) 1 NC_009617.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 357254 ispF 5291529 ispF Clostridium beijerinckii NCIMB 8052 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase YP_001307441.1 356778 R 290402 CDS YP_001307442.1 150015188 5291530 357636..358667 1 NC_009617.1 KEGG: cpe:CPE2314 hypothetical protein; hypothetical protein 358667 5291530 Cbei_0298 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307442.1 357636 D 290402 CDS YP_001307443.1 150015189 5291531 complement(358683..359642) 1 NC_009617.1 PFAM: polysaccharide deacetylase; KEGG: ctc:CTC00229 polysaccharide deacetylase; polysaccharide deacetylase 359642 5291531 Cbei_0299 Clostridium beijerinckii NCIMB 8052 polysaccharide deacetylase YP_001307443.1 358683 R 290402 CDS YP_001307444.1 150015190 5291532 360049..360804 1 NC_009617.1 KEGG: swo:Swol_1623 hypothetical protein; hypothetical protein 360804 5291532 Cbei_0300 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307444.1 360049 D 290402 CDS YP_001307445.1 150015191 5291533 complement(361045..362091) 1 NC_009617.1 catalyzes the formation of biotin from dethiobiotin and sulfur; biotin synthase 362091 5291533 Cbei_0301 Clostridium beijerinckii NCIMB 8052 biotin synthase YP_001307445.1 361045 R 290402 CDS YP_001307446.1 150015192 5291534 362304..362738 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: mma:MM0116 transcriptional regulator, MarR family; MarR family transcriptional regulator 362738 5291534 Cbei_0302 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001307446.1 362304 D 290402 CDS YP_001307447.1 150015193 5291535 362859..363248 1 NC_009617.1 KEGG: bat:BAS3106 hypothetical protein; hypothetical protein 363248 5291535 Cbei_0303 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307447.1 362859 D 290402 CDS YP_001307448.1 150015194 5291536 363257..363583 1 NC_009617.1 PFAM: small multidrug resistance protein; KEGG: cac:CAC3666 membrane transporters of cations and cationic drugs; small multidrug resistance protein 363583 5291536 Cbei_0304 Clostridium beijerinckii NCIMB 8052 small multidrug resistance protein YP_001307448.1 363257 D 290402 CDS YP_001307449.1 150015195 5291537 363882..366476 1 NC_009617.1 PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: cpe:CPE2531 alcohol dehydrogenase / acetaldehyde dehydrogenase; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 366476 5291537 Cbei_0305 Clostridium beijerinckii NCIMB 8052 bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_001307449.1 363882 D 290402 CDS YP_001307450.1 150015196 5291538 complement(366579..369242) 1 NC_009617.1 TIGRFAM: ATPase P; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: cpe:CPE0333 probable cation-transporting ATPase; ATPase P 369242 5291538 Cbei_0306 Clostridium beijerinckii NCIMB 8052 ATPase P YP_001307450.1 366579 R 290402 CDS YP_001307451.1 150015197 5291539 369830..371539 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC0443 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 371539 5291539 Cbei_0307 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001307451.1 369830 D 290402 CDS YP_001307452.1 150015198 5291540 371774..372616 1 NC_009617.1 PFAM: Patatin; KEGG: cpf:CPF_1546 phospholipase, patatin family; patatin 372616 5291540 Cbei_0308 Clostridium beijerinckii NCIMB 8052 patatin YP_001307452.1 371774 D 290402 CDS YP_001307453.1 150015199 5291541 372800..373501 1 NC_009617.1 PFAM: GntR family transcriptional regulator; GntR domain protein; KEGG: cpr:CPR_0301 hypothetical protein; GntR family transcriptional regulator 373501 5291541 Cbei_0309 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001307453.1 372800 D 290402 CDS YP_001307454.1 150015200 5291542 374026..374814 1 NC_009617.1 PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; KEGG: cpe:CPE0311 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha/beta-subunit-like protein 374814 5291542 Cbei_0310 Clostridium beijerinckii NCIMB 8052 electron transfer flavoprotein, alpha/beta-subunit-like protein YP_001307454.1 374026 D 290402 CDS YP_001307455.1 150015201 5291543 374870..376060 1 NC_009617.1 PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; Electron transfer flavoprotein, alpha subunit-like; KEGG: ctc:CTC00974 electron transfer flavoprotein alpha-subunit; electron transfer flavoprotein subunit alpha-like protein 376060 5291543 Cbei_0311 Clostridium beijerinckii NCIMB 8052 electron transfer flavoprotein subunit alpha-like protein YP_001307455.1 374870 D 290402 CDS YP_001307456.1 150015202 5291544 376064..377467 1 NC_009617.1 PFAM: FAD linked oxidase domain protein; KEGG: cac:CAC2542 FAD/FMN-containing dehydrogenase; FAD linked oxidase domain-containing protein 377467 5291544 Cbei_0312 Clostridium beijerinckii NCIMB 8052 FAD linked oxidase domain-containing protein YP_001307456.1 376064 D 290402 CDS YP_001307457.1 150015203 5291545 377805..378377 1 NC_009617.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sth:STH169 RNA polymerase ECF-type sigma factor; ECF subfamily RNA polymerase sigma-24 factor 378377 5291545 Cbei_0313 Clostridium beijerinckii NCIMB 8052 ECF subfamily RNA polymerase sigma-24 factor YP_001307457.1 377805 D 290402 CDS YP_001307458.1 150015204 5291546 378396..379307 1 NC_009617.1 hypothetical protein 379307 5291546 Cbei_0314 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307458.1 378396 D 290402 CDS YP_001307459.1 150015205 5291547 379586..381940 1 NC_009617.1 TIGRFAM: pyruvate formate-lyase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL; KEGG: sdy:SDY_3786 formate acetyltransferase 2; pyruvate formate-lyase 381940 5291547 Cbei_0315 Clostridium beijerinckii NCIMB 8052 pyruvate formate-lyase YP_001307459.1 379586 D 290402 CDS YP_001307460.1 150015206 5291548 381944..382879 1 NC_009617.1 TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Radical SAM domain protein; KEGG: tko:TK0290 pyruvate-formate lyase-activating enzyme; glycyl-radical activating family protein 382879 5291548 Cbei_0316 Clostridium beijerinckii NCIMB 8052 glycyl-radical activating family protein YP_001307460.1 381944 D 290402 CDS YP_001307461.1 150015207 5291549 383097..383774 1 NC_009617.1 PFAM: Transaldolase; KEGG: vpa:VPA1569 transaldolase; transaldolase 383774 5291549 Cbei_0317 Clostridium beijerinckii NCIMB 8052 transaldolase YP_001307461.1 383097 D 290402 CDS YP_001307462.1 150015208 5291550 383890..384957 1 NC_009617.1 PFAM: Nucleotidyl transferase; KEGG: cpr:CPR_2294 mannose-1-phosphate guanylyltransferase; mannose-1-phosphate guanylyltransferase (GDP) 384957 5291550 Cbei_0318 Clostridium beijerinckii NCIMB 8052 mannose-1-phosphate guanylyltransferase (GDP) YP_001307462.1 383890 D 290402 CDS YP_001307463.1 150015209 5291551 385287..385868 1 NC_009617.1 KEGG: cpr:CPR_2292 hypothetical protein; hypothetical protein 385868 5291551 Cbei_0319 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307463.1 385287 D 290402 CDS YP_001307464.1 150015210 5291552 386403..387038 1 NC_009617.1 modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex 387038 5291552 Cbei_0320 Clostridium beijerinckii NCIMB 8052 redox-sensing transcriptional repressor Rex YP_001307464.1 386403 D 290402 CDS YP_001307465.1 150015211 5291553 387416..388201 1 NC_009617.1 catalyzes the formation of crotonoyl-CoA from (3R)-3-hydroxybutanoyl-CoA; 3-hydroxybutyryl-CoA dehydratase 388201 5291553 Cbei_0321 Clostridium beijerinckii NCIMB 8052 3-hydroxybutyryl-CoA dehydratase YP_001307465.1 387416 D 290402 CDS YP_001307466.1 150015212 5291554 388286..389425 1 NC_009617.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: cpr:CPR_2286 butyryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 389425 5291554 Cbei_0322 Clostridium beijerinckii NCIMB 8052 acyl-CoA dehydrogenase domain-containing protein YP_001307466.1 388286 D 290402 CDS YP_001307467.1 150015213 5291555 389439..390218 1 NC_009617.1 PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; KEGG: cpe:CPE2299 electron transfer flavoprotein beta subunit; electron transfer flavoprotein, alpha/beta-subunit-like protein 390218 5291555 Cbei_0323 Clostridium beijerinckii NCIMB 8052 electron transfer flavoprotein, alpha/beta-subunit-like protein YP_001307467.1 389439 D 290402 CDS YP_001307468.1 150015214 5291556 390241..391248 1 NC_009617.1 PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; Electron transfer flavoprotein, alpha subunit-like; KEGG: cpr:CPR_2284 3-hydroxybutyryl-CoA dehydrogenase; electron transfer flavoprotein, alpha/beta-subunit-like protein 391248 5291556 Cbei_0324 Clostridium beijerinckii NCIMB 8052 electron transfer flavoprotein, alpha/beta-subunit-like protein YP_001307468.1 390241 D 290402 CDS YP_001307469.1 150015215 5291557 391440..392288 1 NC_009617.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 392288 5291557 Cbei_0325 Clostridium beijerinckii NCIMB 8052 3-hydroxybutyryl-CoA dehydrogenase YP_001307469.1 391440 D 290402 CDS YP_001307470.1 150015216 5291558 392811..393740 1 NC_009617.1 PFAM: 8-oxoguanine DNA glycosylase domain protein; SMART: HhH-GPD family protein; KEGG: cpr:CPR_2279 8-oxoguanine DNA glycosylase; 8-oxoguanine DNA glycosylase 393740 5291558 Cbei_0326 Clostridium beijerinckii NCIMB 8052 8-oxoguanine DNA glycosylase YP_001307470.1 392811 D 290402 CDS YP_001307471.1 150015217 5291559 394117..395607 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; hydrogenase large subunit domain protein; KEGG: cno:NT01CX_0464 Fe-hydrogenase large subunit family protein; ferredoxin hydrogenase 395607 5291559 Cbei_0327 Clostridium beijerinckii NCIMB 8052 ferredoxin hydrogenase YP_001307471.1 394117 D 290402 CDS YP_001307472.1 150015218 5291560 396015..396299 1 NC_009617.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 396299 groES 5291560 groES Clostridium beijerinckii NCIMB 8052 co-chaperonin GroES YP_001307472.1 396015 D 290402 CDS YP_001307473.1 150015219 5291561 396391..398016 1 NC_009617.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 398016 groEL 5291561 groEL Clostridium beijerinckii NCIMB 8052 chaperonin GroEL YP_001307473.1 396391 D 290402 CDS YP_001307474.1 150015220 5291562 398340..398816 1 NC_009617.1 KEGG: cno:NT01CX_1958 hypothetical protein; Type II secretory pathway pseudopilin PulG-like protein 398816 5291562 Cbei_0330 Clostridium beijerinckii NCIMB 8052 Type II secretory pathway pseudopilin PulG-like protein YP_001307474.1 398340 D 290402 CDS YP_001307475.1 150015221 5291563 399174..400631 1 NC_009617.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 400631 5291563 Cbei_0331 Clostridium beijerinckii NCIMB 8052 inosine 5'-monophosphate dehydrogenase YP_001307475.1 399174 D 290402 CDS YP_001307476.1 150015222 5291564 400819..402351 1 NC_009617.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 402351 guaA 5291564 guaA Clostridium beijerinckii NCIMB 8052 GMP synthase YP_001307476.1 400819 D 290402 CDS YP_001307477.1 150015223 5291565 402770..403093 1 NC_009617.1 hypothetical protein 403093 5291565 Cbei_0333 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307477.1 402770 D 290402 CDS YP_001307478.1 150015224 5291566 403535..405460 1 NC_009617.1 PFAM: regulatory protein, DeoR; M trans-acting positive regulator; PRD domain protein; Helix-turn-helix, type 11 domain protein; KEGG: pac:PPA1482 regulator of sorbitol operon; transcriptional antiterminator BglG 405460 5291566 Cbei_0334 Clostridium beijerinckii NCIMB 8052 transcriptional antiterminator BglG YP_001307478.1 403535 D 290402 CDS YP_001307479.1 150015225 5291567 405475..405927 1 NC_009617.1 PFAM: Glucitol operon activator; KEGG: bld:BLi03867 hypothetical protein; glucitol operon activator 405927 5291567 Cbei_0335 Clostridium beijerinckii NCIMB 8052 glucitol operon activator YP_001307479.1 405475 D 290402 CDS YP_001307480.1 150015226 5291568 405943..406491 1 NC_009617.1 TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC subunit; PFAM: PTS system protein II sorbitol-specific factor; KEGG: lsl:LSL_1891 PTS system, glucitol/sorbitol-specific IIC2 component; PTS system glucitol/sorbitol-specific transporter subunit IIC 406491 5291568 Cbei_0336 Clostridium beijerinckii NCIMB 8052 PTS system glucitol/sorbitol-specific transporter subunit IIC YP_001307480.1 405943 D 290402 CDS YP_001307481.1 150015227 5291569 406509..407519 1 NC_009617.1 TIGRFAM: PTS system, glucitol/sorbitol-specific, IIBC subunit; PFAM: Sorbitol phosphotransferase protein II domain protein; KEGG: pac:PPA1485 PTS system, glucitol/sorbitol-specific IIBC component; PTS system glucitol/sorbitol-specific transporter subunit IIBC 407519 5291569 Cbei_0337 Clostridium beijerinckii NCIMB 8052 PTS system glucitol/sorbitol-specific transporter subunit IIBC YP_001307481.1 406509 D 290402 CDS YP_001307482.1 150015228 5291570 407570..408316 1 NC_009617.1 PFAM: Transaldolase; KEGG: lsl:LSL_1888 transaldolase; transaldolase 408316 5291570 Cbei_0338 Clostridium beijerinckii NCIMB 8052 transaldolase YP_001307482.1 407570 D 290402 CDS YP_001307483.1 150015229 5291571 408381..408749 1 NC_009617.1 TIGRFAM: PTS system, glucitol/sorbitol-specific IIA subunit; PFAM: PTS system glucitol/sorbitol-specific IIA component; KEGG: efa:EF3305 PTS system, sorbitol-specific IIA component; PTS system glucitol/sorbitol-specific transporter subunit IIA 408749 5291571 Cbei_0339 Clostridium beijerinckii NCIMB 8052 PTS system glucitol/sorbitol-specific transporter subunit IIA YP_001307483.1 408381 D 290402 CDS YP_001307484.1 150015230 5291572 408832..409647 1 NC_009617.1 Converts D-sorbitol-dphosphate to D-fructose-6-phosphate; sorbitol-6-phosphate 2-dehydrogenase 409647 5291572 Cbei_0340 Clostridium beijerinckii NCIMB 8052 sorbitol-6-phosphate 2-dehydrogenase YP_001307484.1 408832 D 290402 CDS YP_001307485.1 150015231 5291573 410062..411411 1 NC_009617.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 411411 pgi 5291573 pgi Clostridium beijerinckii NCIMB 8052 glucose-6-phosphate isomerase YP_001307485.1 410062 D 290402 CDS YP_001307486.1 150015232 5291574 411419..411850 1 NC_009617.1 PFAM: protein of unknown function DUF188; KEGG: cno:NT01CX_0440 emg2 protein; hypothetical protein 411850 5291574 Cbei_0342 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307486.1 411419 D 290402 CDS YP_001307487.1 150015233 5291575 412102..414507 1 NC_009617.1 PFAM: Two component regulator three Y domain protein; KEGG: cpr:CPR_2250 two component regulator three Y motif protein; triple tyrosine motif-containing protein 414507 5291575 Cbei_0343 Clostridium beijerinckii NCIMB 8052 triple tyrosine motif-containing protein YP_001307487.1 412102 D 290402 CDS YP_001307488.1 150015234 5291576 414554..415360 1 NC_009617.1 PFAM: Lytic transglycosylase, catalytic; KEGG: cac:CAC2677 lytic murein transglycosylase; lytic transglycosylase 415360 5291576 Cbei_0344 Clostridium beijerinckii NCIMB 8052 lytic transglycosylase YP_001307488.1 414554 D 290402 CDS YP_001307489.1 150015235 5291577 complement(415772..416488) 1 NC_009617.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cno:NT01CX_0437 RNA pseudouridylate synthase family protein; pseudouridine synthase 416488 5291577 Cbei_0345 Clostridium beijerinckii NCIMB 8052 pseudouridine synthase YP_001307489.1 415772 R 290402 CDS YP_001307490.1 150015236 5291578 complement(416705..417370) 1 NC_009617.1 PFAM: nitroreductase; KEGG: bce:BC3321 NAD(P)H-dependent flavin reductase; nitroreductase 417370 5291578 Cbei_0346 Clostridium beijerinckii NCIMB 8052 nitroreductase YP_001307490.1 416705 R 290402 CDS YP_001307491.1 150015237 5291579 417505..417849 1 NC_009617.1 PFAM: helix-turn-helix, HxlR type; KEGG: bsu:BG12143 similar to hypothetical proteins; HxlR family transcriptional regulator 417849 5291579 Cbei_0347 Clostridium beijerinckii NCIMB 8052 HxlR family transcriptional regulator YP_001307491.1 417505 D 290402 CDS YP_001307492.1 150015238 5291580 417992..418426 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: lbl:LBL_2581 transcriptional regulator (MarR family); MarR family transcriptional regulator 418426 5291580 Cbei_0348 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001307492.1 417992 D 290402 CDS YP_001307493.1 150015239 5291581 418491..418712 1 NC_009617.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: pca:Pcar_2331 thioredoxin-like proteins and domains-like; NifU domain-containing protein 418712 5291581 Cbei_0349 Clostridium beijerinckii NCIMB 8052 NifU domain-containing protein YP_001307493.1 418491 D 290402 CDS YP_001307494.1 150015240 5291582 418892..420529 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cth:Cthe_3036 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 420529 5291582 Cbei_0350 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001307494.1 418892 D 290402 CDS YP_001307495.1 150015241 5291583 420801..423068 1 NC_009617.1 PFAM: UvrD/REP helicase; KEGG: cpf:CPF_2542 ATP-dependent DNA helicase PcrA; UvrD/REP helicase 423068 5291583 Cbei_0351 Clostridium beijerinckii NCIMB 8052 UvrD/REP helicase YP_001307495.1 420801 D 290402 CDS YP_001307496.1 150015242 5291584 423088..425079 1 NC_009617.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 425079 ligA 5291584 ligA Clostridium beijerinckii NCIMB 8052 NAD-dependent DNA ligase LigA YP_001307496.1 423088 D 290402 CDS YP_001307497.1 150015243 5291585 425521..427017 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 5; KEGG: cno:NT01CX_0428 probable peptide ABC-type transporter periplasmic binding component; peptide ABC transporter periplasmic protein 427017 5291585 Cbei_0353 Clostridium beijerinckii NCIMB 8052 peptide ABC transporter periplasmic protein YP_001307497.1 425521 D 290402 CDS YP_001307498.1 150015244 5291586 complement(427158..428870) 1 NC_009617.1 KEGG: cpf:CPF_2537 hypothetical protein; hypothetical protein 428870 5291586 Cbei_0354 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307498.1 427158 R 290402 CDS YP_001307499.1 150015245 5291587 428994..429971 1 NC_009617.1 PFAM: AIR synthase related protein domain protein; KEGG: cno:NT01CX_0426 hydrogenase maturation factor; AIR synthase-like protein 429971 5291587 Cbei_0355 Clostridium beijerinckii NCIMB 8052 AIR synthase-like protein YP_001307499.1 428994 D 290402 CDS YP_001307500.1 150015246 5291588 430185..430799 1 NC_009617.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 430799 5291588 Cbei_0356 Clostridium beijerinckii NCIMB 8052 deoxyribonucleotide triphosphate pyrophosphatase YP_001307500.1 430185 D 290402 CDS YP_001307501.1 150015247 5291589 430876..431355 1 NC_009617.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: cpe:CPE2252 conserved hypothetical protein; phosphodiesterase 431355 5291589 Cbei_0357 Clostridium beijerinckii NCIMB 8052 phosphodiesterase YP_001307501.1 430876 D 290402 CDS YP_001307502.1 150015248 5296310 434073..434348 1 NC_009617.1 KEGG: cpr:CPR_0719 hypothetical protein; hypothetical protein 434348 5296310 Cbei_0358 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307502.1 434073 D 290402 CDS YP_001307503.1 150015249 5291591 434495..435151 1 NC_009617.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cac:CAC0541 SAM-dependent methyltransferase; type 12 methyltransferase 435151 5291591 Cbei_0359 Clostridium beijerinckii NCIMB 8052 type 12 methyltransferase YP_001307503.1 434495 D 290402 CDS YP_001307504.1 150015250 5291592 435678..436841 1 NC_009617.1 KEGG: ctc:CTC00840 hypothetical protein; hypothetical protein 436841 5291592 Cbei_0360 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307504.1 435678 D 290402 CDS YP_001307505.1 150015251 5291593 437138..439186 1 NC_009617.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold domain protein; KEGG: cac:CAC0903 sensory transduction histidine kinase; multi-sensor signal transduction histidine kinase 439186 5291593 Cbei_0361 Clostridium beijerinckii NCIMB 8052 multi-sensor signal transduction histidine kinase YP_001307505.1 437138 D 290402 CDS YP_001307506.1 150015252 5291594 439289..439672 1 NC_009617.1 hypothetical protein 439672 5291594 Cbei_0362 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307506.1 439289 D 290402 CDS YP_001307507.1 150015253 5291595 439679..440308 1 NC_009617.1 hypothetical protein 440308 5291595 Cbei_0363 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307507.1 439679 D 290402 CDS YP_001307508.1 150015254 5291596 440308..440622 1 NC_009617.1 hypothetical protein 440622 5291596 Cbei_0364 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307508.1 440308 D 290402 CDS YP_001307509.1 150015255 5291597 440698..443157 1 NC_009617.1 KEGG: btl:BALH_2622 glutathionylspermidine synthase; glutathionylspermidine synthase 443157 5291597 Cbei_0365 Clostridium beijerinckii NCIMB 8052 glutathionylspermidine synthase YP_001307509.1 440698 D 290402 CDS YP_001307510.1 150015256 5291598 443262..443471 1 NC_009617.1 hypothetical protein 443471 5291598 Cbei_0366 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307510.1 443262 D 290402 CDS YP_001307511.1 150015257 5291599 443678..445738 1 NC_009617.1 PFAM: peptidase M13, neprilysin; peptidase M13; KEGG: mfl:Mfl241 membrane metallo endopeptidase; endothelin-converting protein 1 445738 5291599 Cbei_0367 Clostridium beijerinckii NCIMB 8052 endothelin-converting protein 1 YP_001307511.1 443678 D 290402 CDS YP_001307512.1 150015258 5296314 451183..452265 1 NC_009617.1 PFAM: polysaccharide deacetylase; KEGG: cpf:CPF_0823 polysaccharide deacetylase family protein; polysaccharide deacetylase 452265 5296314 Cbei_0368 Clostridium beijerinckii NCIMB 8052 polysaccharide deacetylase YP_001307512.1 451183 D 290402 CDS YP_001307513.1 150015259 5291601 452554..453939 1 NC_009617.1 PFAM: peptidase U62, modulator of DNA gyrase; KEGG: cpe:CPE0339 TldD protein; C69 family peptidase 453939 5291601 Cbei_0369 Clostridium beijerinckii NCIMB 8052 C69 family peptidase YP_001307513.1 452554 D 290402 CDS YP_001307514.1 150015260 5291602 453942..455285 1 NC_009617.1 PFAM: peptidase U62, modulator of DNA gyrase; KEGG: cpf:CPF_0324 TldD/PmbA family protein; C69 family peptidase 455285 5291602 Cbei_0370 Clostridium beijerinckii NCIMB 8052 C69 family peptidase YP_001307514.1 453942 D 290402 CDS YP_001307515.1 150015261 5291603 455331..456140 1 NC_009617.1 PFAM: protein of unknown function DUF1113; KEGG: cpf:CPF_1398 hypothetical protein; hypothetical protein 456140 5291603 Cbei_0371 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307515.1 455331 D 290402 CDS YP_001307516.1 150015262 5291604 complement(456197..458080) 1 NC_009617.1 PFAM: sulfatase; KEGG: cpe:CPE2237 hypothetical protein; sulfatase 458080 5291604 Cbei_0372 Clostridium beijerinckii NCIMB 8052 sulfatase YP_001307516.1 456197 R 290402 CDS YP_001307517.1 150015263 5291605 458370..458942 1 NC_009617.1 KEGG: cpr:CPR_2206 predicted transcriptional regulator; transcriptional regulator 458942 5291605 Cbei_0373 Clostridium beijerinckii NCIMB 8052 transcriptional regulator YP_001307517.1 458370 D 290402 CDS YP_001307518.1 150015264 5291606 458967..459923 1 NC_009617.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cpe:CPE2235 probable monooxygenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 459923 5291606 Cbei_0374 Clostridium beijerinckii NCIMB 8052 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001307518.1 458967 D 290402 CDS YP_001307519.1 150015265 5291607 complement(460001..460564) 1 NC_009617.1 PFAM: lipolytic protein, G-D-S-L family; KEGG: ctc:CTC00881 arylesterase; GDSL family lipase 460564 5291607 Cbei_0375 Clostridium beijerinckii NCIMB 8052 GDSL family lipase YP_001307519.1 460001 R 290402 CDS YP_001307520.1 150015266 5291608 complement(460586..461284) 1 NC_009617.1 PFAM: endodeoxyribonuclease RusA; KEGG: cpe:CPE2233 hypothetical protein; endodeoxyribonuclease RusA 461284 5291608 Cbei_0376 Clostridium beijerinckii NCIMB 8052 endodeoxyribonuclease RusA YP_001307520.1 460586 R 290402 CDS YP_001307521.1 150015267 5291609 461761..462780 1 NC_009617.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 462780 5291609 Cbei_0377 Clostridium beijerinckii NCIMB 8052 DNA-binding/iron metalloprotein/AP endonuclease YP_001307521.1 461761 D 290402 CDS YP_001307522.1 150015268 5291610 462790..463791 1 NC_009617.1 KEGG: cpe:CPE2231 hypothetical protein; hypothetical protein 463791 5291610 Cbei_0378 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307522.1 462790 D 290402 CDS YP_001307523.1 150015269 5291611 464057..465286 1 NC_009617.1 PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: cpe:CPE2230 probable serine proteinase Do; 2-alkenal reductase 465286 5291611 Cbei_0379 Clostridium beijerinckii NCIMB 8052 2-alkenal reductase YP_001307523.1 464057 D 290402 CDS YP_001307524.1 150015270 5291612 465486..465794 1 NC_009617.1 PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: cpe:CPE2577 PTS system, cellobiose-specific II component; PTS system lactose/cellobiose-specific transporter subunit IIA 465794 5291612 Cbei_0380 Clostridium beijerinckii NCIMB 8052 PTS system lactose/cellobiose-specific transporter subunit IIA YP_001307524.1 465486 D 290402 CDS YP_001307525.1 150015271 5291613 465807..466961 1 NC_009617.1 KEGG: ctc:CTC00267 extracellular solute-binding protein; sugar ABC transporter periplasmic protein 466961 5291613 Cbei_0381 Clostridium beijerinckii NCIMB 8052 sugar ABC transporter periplasmic protein YP_001307525.1 465807 D 290402 CDS YP_001307526.1 150015272 5291614 complement(467119..468237) 1 NC_009617.1 PFAM: glycosyl transferase, group 1; KEGG: cpf:CPF_2487 mannosyltransferase; group 1 glycosyl transferase 468237 5291614 Cbei_0382 Clostridium beijerinckii NCIMB 8052 group 1 glycosyl transferase YP_001307526.1 467119 R 290402 CDS YP_001307527.1 150015273 5291615 468367..469383 1 NC_009617.1 TIGRFAM: Spore coat protein CotS; KEGG: cno:NT01CX_0586 spore coat protein S; spore coat protein CotS 469383 5291615 Cbei_0383 Clostridium beijerinckii NCIMB 8052 spore coat protein CotS YP_001307527.1 468367 D 290402 CDS YP_001307528.1 150015274 5291616 469385..470191 1 NC_009617.1 KEGG: ctc:CTC00270 spore coat protein; hypothetical protein 470191 5291616 Cbei_0384 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307528.1 469385 D 290402 CDS YP_001307529.1 150015275 5291617 470247..471302 1 NC_009617.1 TIGRFAM: Spore coat protein CotS; KEGG: cpe:CPE2220 probable spore coat protein; spore coat protein CotS 471302 5291617 Cbei_0385 Clostridium beijerinckii NCIMB 8052 spore coat protein CotS YP_001307529.1 470247 D 290402 CDS YP_001307530.1 150015276 5291618 complement(471626..472747) 1 NC_009617.1 PFAM: glycosyl transferase, group 1; KEGG: ctc:CTC00272 mannosyltransferase; group 1 glycosyl transferase 472747 5291618 Cbei_0386 Clostridium beijerinckii NCIMB 8052 group 1 glycosyl transferase YP_001307530.1 471626 R 290402 CDS YP_001307531.1 150015277 5291619 472856..473854 1 NC_009617.1 TIGRFAM: Spore coat protein CotS; KEGG: cpf:CPF_2482 spore coat protein CotS; spore coat protein CotS 473854 5291619 Cbei_0387 Clostridium beijerinckii NCIMB 8052 spore coat protein CotS YP_001307531.1 472856 D 290402 CDS YP_001307532.1 150015278 5291620 474017..474877 1 NC_009617.1 PFAM: peptidase U57, YabG; KEGG: cpe:CPE2217 conserved hypothetical protein; peptidase U57, YabG 474877 5291620 Cbei_0388 Clostridium beijerinckii NCIMB 8052 peptidase U57, YabG YP_001307532.1 474017 D 290402 CDS YP_001307533.1 150015279 5291621 475116..475655 1 NC_009617.1 PFAM: glutathione peroxidase; KEGG: cpr:CPR_1026 glutathione peroxidase; glutathione peroxidase 475655 5291621 Cbei_0389 Clostridium beijerinckii NCIMB 8052 glutathione peroxidase YP_001307533.1 475116 D 290402 CDS YP_001307534.1 150015280 5291622 476271..476513 1 NC_009617.1 PFAM: protein of unknown function DUF1021; KEGG: cac:CAC2904 uncharacterized protein, VEG B.subtilis ortholog; hypothetical protein 476513 5291622 Cbei_0390 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307534.1 476271 D 290402 CDS YP_001307535.1 150015281 5291623 476977..478539 1 NC_009617.1 PFAM: Peptidoglycan-binding LysM; KEGG: ctc:CTC00280 hypothetical protein; peptidoglycan-binding LysM 478539 5291623 Cbei_0391 Clostridium beijerinckii NCIMB 8052 peptidoglycan-binding LysM YP_001307535.1 476977 D 290402 CDS YP_001307536.1 150015282 5291624 478869..479714 1 NC_009617.1 TIGRFAM: cyanophycinase; PFAM: peptidase S51, dipeptidase E; KEGG: ctc:CTC00281 cyanophycinase; cyanophycinase 479714 5291624 Cbei_0392 Clostridium beijerinckii NCIMB 8052 cyanophycinase YP_001307536.1 478869 D 290402 CDS YP_001307537.1 150015283 5291625 479686..482328 1 NC_009617.1 catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase 482328 5291625 Cbei_0393 Clostridium beijerinckii NCIMB 8052 cyanophycin synthetase YP_001307537.1 479686 D 290402 CDS YP_001307538.1 150015284 5291626 482477..483319 1 NC_009617.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 483319 ipk 5291626 ipk Clostridium beijerinckii NCIMB 8052 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_001307538.1 482477 D 290402 CDS YP_001307539.1 150015285 5291627 483383..484120 1 NC_009617.1 TIGRFAM: Sporulation stage II, protein R; KEGG: ctc:CTC00288 stage II sporulation protein R; sporulation stage II, protein R 484120 5291627 Cbei_0395 Clostridium beijerinckii NCIMB 8052 sporulation stage II, protein R YP_001307539.1 483383 D 290402 CDS YP_001307540.1 150015286 5291628 484252..484668 1 NC_009617.1 PFAM: Domain of unknown function DUF1934; KEGG: cpf:CPF_2473 hypothetical protein; hypothetical protein 484668 5291628 Cbei_0396 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307540.1 484252 D 290402 CDS YP_001307541.1 150015287 5291629 484774..485082 1 NC_009617.1 KEGG: cno:NT01CX_0556 hypothetical protein; hypothetical protein 485082 5291629 Cbei_0397 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307541.1 484774 D 290402 CDS YP_001307542.1 150015288 5291630 485247..486857 1 NC_009617.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 486857 pyrG 5291630 pyrG Clostridium beijerinckii NCIMB 8052 CTP synthetase YP_001307542.1 485247 D 290402 CDS YP_001307543.1 150015289 5291631 487168..488610 1 NC_009617.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 488610 rho 5291631 rho Clostridium beijerinckii NCIMB 8052 transcription termination factor Rho YP_001307543.1 487168 D 290402 CDS YP_001307544.1 150015290 5291632 complement(488651..489757) 1 NC_009617.1 PFAM: glycosyl transferase, group 1; Glycosyltransferase 28, C-terminal domain; Monogalactosyldiacylglycerol synthase; KEGG: cpf:CPF_2470 monogalactosyldiacylglycerol synthase; monogalactosyldiacylglycerol synthase 489757 5291632 Cbei_0400 Clostridium beijerinckii NCIMB 8052 monogalactosyldiacylglycerol synthase YP_001307544.1 488651 R 290402 CDS YP_001307545.1 150015291 5291633 complement(489971..490180) 1 NC_009617.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 490180 rpmE 5291633 rpmE Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L31 YP_001307545.1 489971 R 290402 CDS YP_001307546.1 150015292 5291634 490370..490954 1 NC_009617.1 catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 490954 5291634 Cbei_0402 Clostridium beijerinckii NCIMB 8052 thymidine kinase YP_001307546.1 490370 D 290402 CDS YP_001307547.1 150015293 5291635 490980..492740 1 NC_009617.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; protein of unknown function DUF1385; KEGG: cpr:CPR_2177 modification methylase, HemK family; HemK family modification methylase 492740 5291635 Cbei_0403 Clostridium beijerinckii NCIMB 8052 HemK family modification methylase YP_001307547.1 490980 D 290402 CDS YP_001307548.1 150015294 5291636 492876..493958 1 NC_009617.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 493958 prfA 5291636 prfA Clostridium beijerinckii NCIMB 8052 peptide chain release factor 1 YP_001307548.1 492876 D 290402 CDS YP_001307549.1 150015295 5291637 494024..494611 1 NC_009617.1 KEGG: cpf:CPF_2465 hypothetical protein; hypothetical protein 494611 5291637 Cbei_0405 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307549.1 494024 D 290402 CDS YP_001307550.1 150015296 5291638 494685..495716 1 NC_009617.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC, N-terminal domain; KEGG: cpr:CPR_2174 SUA5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC/YwlC family protein 495716 5291638 Cbei_0406 Clostridium beijerinckii NCIMB 8052 Sua5/YciO/YrdC/YwlC family protein YP_001307550.1 494685 D 290402 CDS YP_001307551.1 150015297 5291639 495722..496216 1 NC_009617.1 TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; KEGG: cpr:CPR_2173 ribose 5-phosphate isomerase B; RpiB/LacA/LacB family sugar-phosphate isomerase 496216 5291639 Cbei_0407 Clostridium beijerinckii NCIMB 8052 RpiB/LacA/LacB family sugar-phosphate isomerase YP_001307551.1 495722 D 290402 CDS YP_001307552.1 150015298 5291640 496366..496995 1 NC_009617.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 496995 upp 5291640 upp Clostridium beijerinckii NCIMB 8052 uracil phosphoribosyltransferase YP_001307552.1 496366 D 290402 CDS YP_001307553.1 150015299 5291641 497077..497571 1 NC_009617.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: cac:CAC2876 deoxycytidylate deaminase; zinc-binding CMP/dCMP deaminase 497571 5291641 Cbei_0409 Clostridium beijerinckii NCIMB 8052 zinc-binding CMP/dCMP deaminase YP_001307553.1 497077 D 290402 CDS YP_001307554.1 150015300 5291642 497809..498999 1 NC_009617.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: cpr:CPR_2171 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 498999 5291642 Cbei_0410 Clostridium beijerinckii NCIMB 8052 UDP-N-acetylglucosamine 2-epimerase YP_001307554.1 497809 D 290402 CDS YP_001307555.1 150015301 5291643 499121..500302 1 NC_009617.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase 500302 5291643 Cbei_0411 Clostridium beijerinckii NCIMB 8052 acetyl-CoA acetyltransferase YP_001307555.1 499121 D 290402 CDS YP_001307556.1 150015302 5291644 501380..502069 1 NC_009617.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 502069 5291644 Cbei_0412 Clostridium beijerinckii NCIMB 8052 F0F1 ATP synthase subunit A YP_001307556.1 501380 D 290402 CDS YP_001307557.1 150015303 5291645 502123..502338 1 NC_009617.1 produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 502338 5291645 Cbei_0413 Clostridium beijerinckii NCIMB 8052 F0F1 ATP synthase subunit C YP_001307557.1 502123 D 290402 CDS YP_001307558.1 150015304 5291646 502391..502870 1 NC_009617.1 produces ATP from ADP in the presence of a proton gradient across the membrane; subunit B is part of the membrane proton channel; F0F1 ATP synthase subunit B 502870 5291646 Cbei_0414 Clostridium beijerinckii NCIMB 8052 F0F1 ATP synthase subunit B YP_001307558.1 502391 D 290402 CDS YP_001307559.1 150015305 5291647 502873..503412 1 NC_009617.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 503412 5291647 Cbei_0415 Clostridium beijerinckii NCIMB 8052 F0F1 ATP synthase subunit delta YP_001307559.1 502873 D 290402 CDS YP_001307560.1 150015306 5291648 503423..504937 1 NC_009617.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 504937 5291648 Cbei_0416 Clostridium beijerinckii NCIMB 8052 F0F1 ATP synthase subunit alpha YP_001307560.1 503423 D 290402 CDS YP_001307561.1 150015307 5291649 504979..505830 1 NC_009617.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 505830 5291649 Cbei_0417 Clostridium beijerinckii NCIMB 8052 F0F1 ATP synthase subunit gamma YP_001307561.1 504979 D 290402 CDS YP_001307562.1 150015308 5291650 505845..507236 1 NC_009617.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 507236 5291650 Cbei_0418 Clostridium beijerinckii NCIMB 8052 F0F1 ATP synthase subunit beta YP_001307562.1 505845 D 290402 CDS YP_001307563.1 150015309 5291651 507252..507659 1 NC_009617.1 TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+-transporting two-sector ATPase, delta/epsilon subunit; KEGG: cno:NT01CX_0529 ATP synthase F1, epsilon subunit; ATP synthase F1 subunit epsilon 507659 5291651 Cbei_0419 Clostridium beijerinckii NCIMB 8052 ATP synthase F1 subunit epsilon YP_001307563.1 507252 D 290402 CDS YP_001307564.1 150015310 5291652 507874..508524 1 NC_009617.1 KEGG: cpf:CPF_2450 hypothetical protein; hypothetical protein 508524 5291652 Cbei_0420 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307564.1 507874 D 290402 CDS YP_001307565.1 150015311 5291653 508686..509948 1 NC_009617.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 509948 5291653 Cbei_0421 Clostridium beijerinckii NCIMB 8052 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001307565.1 508686 D 290402 CDS YP_001307566.1 150015312 5291654 510516..511574 1 NC_009617.1 TIGRFAM: SpoIID/LytB domain; Sporulation stage II, protein D firmicutes; PFAM: Stage II sporulation D domain protein; KEGG: ctc:CTC00315 stage II sporulation protein D; sporulation stage II protein D 511574 5291654 Cbei_0422 Clostridium beijerinckii NCIMB 8052 sporulation stage II protein D YP_001307566.1 510516 D 290402 CDS YP_001307567.1 150015313 5291655 511999..512751 1 NC_009617.1 PFAM: peptidase M23B; KEGG: ctc:CTC00316 conserved membrane-associated protein; peptidase M23B 512751 5291655 Cbei_0423 Clostridium beijerinckii NCIMB 8052 peptidase M23B YP_001307567.1 511999 D 290402 CDS YP_001307568.1 150015314 5291656 512859..513113 1 NC_009617.1 TIGRFAM: Sporulation stage III, transcriptional regulator SpoIIID; KEGG: cpr:CPR_2156 stage III sporulation protein D; sporulation stage III, transcriptional regulator SpoIIID 513113 5291656 Cbei_0424 Clostridium beijerinckii NCIMB 8052 sporulation stage III, transcriptional regulator SpoIIID YP_001307568.1 512859 D 290402 CDS YP_001307569.1 150015315 5291657 513193..514227 1 NC_009617.1 TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; KEGG: cno:NT01CX_0523 cell shape determining protein, MreB/Mrl family; rod shape-determining protein Mbl 514227 5291657 Cbei_0425 Clostridium beijerinckii NCIMB 8052 rod shape-determining protein Mbl YP_001307569.1 513193 D 290402 CDS YP_001307570.1 150015316 5291658 complement(514295..514831) 1 NC_009617.1 PFAM: protein of unknown function DUF1256; KEGG: cac:CAC2857 spore protease GPR related protein, YYAC B.subtilis ortholog; hypothetical protein 514831 5291658 Cbei_0426 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307570.1 514295 R 290402 CDS YP_001307571.1 150015317 5291659 514932..515336 1 NC_009617.1 KEGG: cpe:CPE2178 hypothetical protein; hypothetical protein 515336 5291659 Cbei_0427 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307571.1 514932 D 290402 CDS YP_001307572.1 150015318 5296321 516603..517778 1 NC_009617.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 517778 5296321 Cbei_0428 Clostridium beijerinckii NCIMB 8052 S-adenosylmethionine synthetase YP_001307572.1 516603 D 290402 CDS YP_001307573.1 150015319 5291661 518230..520458 1 NC_009617.1 TIGRFAM: helicase, RecD/TraA family; SMART: Helix-hairpin-helix DNA-binding, class 1; ATPase AAA; KEGG: cpr:CPR_2143 helicase, RecD/TraA family; recombinase D 520458 5291661 Cbei_0429 Clostridium beijerinckii NCIMB 8052 recombinase D YP_001307573.1 518230 D 290402 CDS YP_001307574.1 150015320 5291662 520477..521493 1 NC_009617.1 KEGG: ctc:CTC00323 hypothetical protein; hypothetical protein 521493 5291662 Cbei_0430 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307574.1 520477 D 290402 CDS YP_001307575.1 150015321 5291663 521466..522122 1 NC_009617.1 KEGG: cpf:CPF_2431 ComF protein; ComF protein 522122 5291663 Cbei_0431 Clostridium beijerinckii NCIMB 8052 ComF protein YP_001307575.1 521466 D 290402 CDS YP_001307576.1 150015322 5291664 522538..523071 1 NC_009617.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: cpf:CPF_2430 ribosomal subunit interface protein; sigma 54 modulation protein/30S ribosomal protein S30EA 523071 5291664 Cbei_0432 Clostridium beijerinckii NCIMB 8052 sigma 54 modulation protein/30S ribosomal protein S30EA YP_001307576.1 522538 D 290402 CDS YP_001307577.1 150015323 5291665 523416..525983 1 NC_009617.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 525983 secA 5291665 secA Clostridium beijerinckii NCIMB 8052 preprotein translocase subunit SecA YP_001307577.1 523416 D 290402 CDS YP_001307578.1 150015324 5291666 526278..527252 1 NC_009617.1 catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA; peptide chain release factor 2 527252 5291666 Cbei_0434 Clostridium beijerinckii NCIMB 8052 peptide chain release factor 2 YP_001307578.1 526278 D 290402 CDS YP_001307579.1 150015325 5291667 527914..528609 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cpf:CPF_1403 DNA-binding response regulator; two component transcriptional regulator 528609 5291667 Cbei_0435 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001307579.1 527914 D 290402 CDS YP_001307580.1 150015326 5291668 528599..530101 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: ctc:CTC00849 two-component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 530101 5291668 Cbei_0436 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001307580.1 528599 D 290402 CDS YP_001307581.1 150015327 5291669 530300..531211 1 NC_009617.1 PFAM: peptidase M50; KEGG: dsy:DSY1792 hypothetical protein; peptidase M50 531211 5291669 Cbei_0437 Clostridium beijerinckii NCIMB 8052 peptidase M50 YP_001307581.1 530300 D 290402 CDS YP_001307582.1 150015328 5291670 531394..531564 1 NC_009617.1 hypothetical protein 531564 5291670 Cbei_0438 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307582.1 531394 D 290402 CDS YP_001307583.1 150015329 5291671 531720..533897 1 NC_009617.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: cpr:CPR_2136 transcription accessory protein; RNA-binding S1 domain-containing protein 533897 5291671 Cbei_0439 Clostridium beijerinckii NCIMB 8052 RNA-binding S1 domain-containing protein YP_001307583.1 531720 D 290402 CDS YP_001307584.1 150015330 5291672 534155..535111 1 NC_009617.1 PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: ooe:OEOE_0048 predicted dehydrogenase or related protein; oxidoreductase domain-containing protein 535111 5291672 Cbei_0440 Clostridium beijerinckii NCIMB 8052 oxidoreductase domain-containing protein YP_001307584.1 534155 D 290402 CDS YP_001307585.1 150015331 5291673 535137..536090 1 NC_009617.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: cac:CAC2782 predicted permease; hypothetical protein 536090 5291673 Cbei_0441 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307585.1 535137 D 290402 CDS YP_001307586.1 150015332 5291674 536187..537167 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: bcl:ABC0373 transcriptional regulator, AraC/XylS family; helix-turn-helix domain-containing protein 537167 5291674 Cbei_0442 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001307586.1 536187 D 290402 CDS YP_001307587.1 150015333 5291675 537514..538407 1 NC_009617.1 PFAM: ROK family protein; KEGG: cpf:CPF_2334 ROK family protein; ROK family protein 538407 5291675 Cbei_0443 Clostridium beijerinckii NCIMB 8052 ROK family protein YP_001307587.1 537514 D 290402 CDS YP_001307588.1 150015334 5291676 complement(538563..540656) 1 NC_009617.1 PFAM: glutamine synthetase, catalytic region; KEGG: cth:Cthe_0863 glutamine synthetase, catalytic region; glutamine synthetase 540656 5291676 Cbei_0444 Clostridium beijerinckii NCIMB 8052 glutamine synthetase YP_001307588.1 538563 R 290402 CDS YP_001307589.1 150015335 5291677 541381..542784 1 NC_009617.1 TIGRFAM: rhamnulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: bha:BH1551 rhamnulokinase; rhamnulokinase 542784 5291677 Cbei_0445 Clostridium beijerinckii NCIMB 8052 rhamnulokinase YP_001307589.1 541381 D 290402 CDS YP_001307590.1 150015336 5291678 542921..544177 1 NC_009617.1 catalyzes the formation of L-rhamnulose from L-rhamnose; L-rhamnose isomerase 544177 5291678 Cbei_0446 Clostridium beijerinckii NCIMB 8052 L-rhamnose isomerase YP_001307590.1 542921 D 290402 CDS YP_001307591.1 150015337 5291679 544306..545142 1 NC_009617.1 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase 545142 5291679 Cbei_0447 Clostridium beijerinckii NCIMB 8052 5-keto-4-deoxyuronate isomerase YP_001307591.1 544306 D 290402 CDS YP_001307592.1 150015338 5291680 545167..545949 1 NC_009617.1 Involved in the metabolism of 2-deoxyglucose; 2-deoxy-D-gluconate 3-dehydrogenase 545949 5291680 Cbei_0448 Clostridium beijerinckii NCIMB 8052 2-deoxy-D-gluconate 3-dehydrogenase YP_001307592.1 545167 D 290402 CDS YP_001307593.1 150015339 5291681 complement(546348..547475) 1 NC_009617.1 PFAM: glycosyl hydrolase, family 88; KEGG: efa:EF0428 hypothetical protein; glycosyl hydrolase family protein 547475 5291681 Cbei_0449 Clostridium beijerinckii NCIMB 8052 glycosyl hydrolase family protein YP_001307593.1 546348 R 290402 CDS YP_001307594.1 150015340 5291682 547974..548810 1 NC_009617.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: efa:EF0438 hypothetical protein; xylose isomerase domain-containing protein 548810 5291682 Cbei_0450 Clostridium beijerinckii NCIMB 8052 xylose isomerase domain-containing protein YP_001307594.1 547974 D 290402 CDS YP_001307595.1 150015341 5291683 549399..550937 1 NC_009617.1 KEGG: eca:ECA3560 oligogalacturonide transporter; oligogalacturonide transporter 550937 5291683 Cbei_0451 Clostridium beijerinckii NCIMB 8052 oligogalacturonide transporter YP_001307595.1 549399 D 290402 CDS YP_001307596.1 150015342 5291684 complement(551096..551410) 1 NC_009617.1 TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; KEGG: msu:MS2324 uncharacterized ACR; L-rhamnose 1-epimerase 551410 5291684 Cbei_0452 Clostridium beijerinckii NCIMB 8052 L-rhamnose 1-epimerase YP_001307596.1 551096 R 290402 CDS YP_001307597.1 150015343 5291685 551646..552404 1 NC_009617.1 PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: ecv:APECO1_839 DeoR-type transcriptional regulator; DeoR family transcriptional regulator 552404 5291685 Cbei_0453 Clostridium beijerinckii NCIMB 8052 DeoR family transcriptional regulator YP_001307597.1 551646 D 290402 CDS YP_001307598.1 150015344 5291686 552776..553594 1 NC_009617.1 PFAM: class II aldolase/adducin family protein; KEGG: msu:MS2327 ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; rhamnulose-1-phosphate aldolase 553594 5291686 Cbei_0454 Clostridium beijerinckii NCIMB 8052 rhamnulose-1-phosphate aldolase YP_001307598.1 552776 D 290402 CDS YP_001307599.1 150015345 5291687 553934..555091 1 NC_009617.1 TIGRFAM: lactaldehyde reductase; PFAM: iron-containing alcohol dehydrogenase; KEGG: cpf:CPF_1046 lactaldehyde reductase; L-1,2-propanediol oxidoreductase 555091 5291687 Cbei_0455 Clostridium beijerinckii NCIMB 8052 L-1,2-propanediol oxidoreductase YP_001307599.1 553934 D 290402 CDS YP_001307600.1 150015346 5291688 555541..556008 1 NC_009617.1 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) in DNA. Repairs alkylated guanine in DNA by stoichiometrically transferring the alkyl group at the O-6 position to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated; methylated-DNA--protein-cysteine methyltransferase 556008 5291688 Cbei_0456 Clostridium beijerinckii NCIMB 8052 methylated-DNA--protein-cysteine methyltransferase YP_001307600.1 555541 D 290402 CDS YP_001307601.1 150015347 5291689 556310..556927 1 NC_009617.1 PFAM: regulatory protein, DeoR; KEGG: smu:SMU.507 transcriptional regulator (DeoR family); DeoR family transcriptional regulator 556927 5291689 Cbei_0457 Clostridium beijerinckii NCIMB 8052 DeoR family transcriptional regulator YP_001307601.1 556310 D 290402 CDS YP_001307602.1 150015348 5291690 557059..557871 1 NC_009617.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: gfo:orf2334 haloacid dehalogenase-like hydrolase; cof family hydrolase 557871 5291690 Cbei_0458 Clostridium beijerinckii NCIMB 8052 cof family hydrolase YP_001307602.1 557059 D 290402 CDS YP_001307603.1 150015349 5291691 complement(558114..558923) 1 NC_009617.1 PFAM: IclR family transcriptional regulator; Transcriptional regulator IclR-like; KEGG: cno:NT01CX_1476 transcription regulator (IclR family) BH2137; IclR family transcriptional regulator 558923 5291691 Cbei_0459 Clostridium beijerinckii NCIMB 8052 IclR family transcriptional regulator YP_001307603.1 558114 R 290402 CDS YP_001307604.1 150015350 5291692 559167..559949 1 NC_009617.1 Involved in the metabolism of 2-deoxyglucose; 2-deoxy-D-gluconate 3-dehydrogenase 559949 5291692 Cbei_0460 Clostridium beijerinckii NCIMB 8052 2-deoxy-D-gluconate 3-dehydrogenase YP_001307604.1 559167 D 290402 CDS YP_001307605.1 150015351 5291693 560086..561033 1 NC_009617.1 PFAM: PfkB domain protein; KEGG: oih:OB2698 2-keto-3-deoxygluconate kinase; ribokinase-like domain-containing protein 561033 5291693 Cbei_0461 Clostridium beijerinckii NCIMB 8052 ribokinase-like domain-containing protein YP_001307605.1 560086 D 290402 CDS YP_001307606.1 150015352 5291694 561123..561749 1 NC_009617.1 TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: tma:TM0066 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 561749 5291694 Cbei_0462 Clostridium beijerinckii NCIMB 8052 2-dehydro-3-deoxyphosphogluconate aldolase YP_001307606.1 561123 D 290402 CDS YP_001307607.1 150015353 5291695 562066..562455 1 NC_009617.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: cth:Cthe_3118 hemerythrin-like metal-binding protein; hemerythrin-like metal-binding protein 562455 5291695 Cbei_0463 Clostridium beijerinckii NCIMB 8052 hemerythrin-like metal-binding protein YP_001307607.1 562066 D 290402 CDS YP_001307608.1 150015354 5291696 562927..563508 1 NC_009617.1 KEGG: cpr:CPR_2135 conserved membrane protein, probable transporter YPAA; hypothetical protein 563508 5291696 Cbei_0464 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307608.1 562927 D 290402 CDS YP_001307609.1 150015355 5291697 564288..564449 1 NC_009617.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: sfu:Sfum_3222 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 564449 5291697 Cbei_0465 Clostridium beijerinckii NCIMB 8052 rubredoxin-type Fe(Cys)4 protein YP_001307609.1 564288 D 290402 CDS YP_001307610.1 150015356 5291698 564646..565410 1 NC_009617.1 PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: cac:CAC0113 transcriptional regulator of sugar metabolism; DeoR family transcriptional regulator 565410 5291698 Cbei_0466 Clostridium beijerinckii NCIMB 8052 DeoR family transcriptional regulator YP_001307610.1 564646 D 290402 CDS YP_001307611.1 150015357 5291699 complement(565563..566003) 1 NC_009617.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: cth:Cthe_1774 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase 566003 5291699 Cbei_0467 Clostridium beijerinckii NCIMB 8052 ribosomal-protein-alanine acetyltransferase YP_001307611.1 565563 R 290402 CDS YP_001307612.1 150015358 5291700 complement(566003..566737) 1 NC_009617.1 PFAM: peptidase M22, glycoprotease; KEGG: cpe:CPE2165 probable glycoprotein endopeptidase; peptidase M22, glycoprotease 566737 5291700 Cbei_0468 Clostridium beijerinckii NCIMB 8052 peptidase M22, glycoprotease YP_001307612.1 566003 R 290402 CDS YP_001307613.1 150015359 5291701 complement(566734..567195) 1 NC_009617.1 PFAM: protein of unknown function UPF0079; KEGG: cpe:CPE2164 conserved hypothetical protein; hypothetical protein 567195 5291701 Cbei_0469 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307613.1 566734 R 290402 CDS YP_001307614.1 150015360 5291702 567643..568545 1 NC_009617.1 PFAM: periplasmic solute binding protein; KEGG: ctc:CTC02442 zinc-binding lipoprotein (adhesin B); periplasmic solute binding protein 568545 5291702 Cbei_0470 Clostridium beijerinckii NCIMB 8052 periplasmic solute binding protein YP_001307614.1 567643 D 290402 CDS YP_001307615.1 150015361 5296322 569016..569396 1 NC_009617.1 TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: dsy:DSY1808 hypothetical protein; endoribonuclease L-PSP 569396 5296322 Cbei_0471 Clostridium beijerinckii NCIMB 8052 endoribonuclease L-PSP YP_001307615.1 569016 D 290402 CDS YP_001307616.1 150015362 5291704 complement(569494..570561) 1 NC_009617.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: cpe:CPE0992 hypothetical protein; 2-nitropropane dioxygenase 570561 5291704 Cbei_0472 Clostridium beijerinckii NCIMB 8052 2-nitropropane dioxygenase YP_001307616.1 569494 R 290402 CDS YP_001307617.1 150015363 5296323 571244..572260 1 NC_009617.1 KEGG: pfa:PF10_0171 hypothetical protein; hypothetical protein 572260 5296323 Cbei_0473 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307617.1 571244 D 290402 CDS YP_001307618.1 150015364 5291706 572475..572666 1 NC_009617.1 PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: cpr:CPR_2128 small, acid-soluble spore protein 1; small acid-soluble spore protein, alpha/beta type 572666 5291706 Cbei_0474 Clostridium beijerinckii NCIMB 8052 small acid-soluble spore protein, alpha/beta type YP_001307618.1 572475 D 290402 CDS YP_001307619.1 150015365 5291707 572898..574031 1 NC_009617.1 PFAM: metallophosphoesterase; KEGG: cpf:CPF_2416 Ser/Thr protein phosphatase family protein; metallophosphoesterase 574031 5291707 Cbei_0475 Clostridium beijerinckii NCIMB 8052 metallophosphoesterase YP_001307619.1 572898 D 290402 CDS YP_001307620.1 150015366 5291708 574133..576868 1 NC_009617.1 KEGG: cpr:CPR_2126 hypothetical protein; hypothetical protein 576868 5291708 Cbei_0476 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307620.1 574133 D 290402 CDS YP_001307621.1 150015367 5291709 576978..577874 1 NC_009617.1 PFAM: periplasmic solute binding protein; KEGG: cpf:CPF_2413 ABC transporter substrate-binding protein; periplasmic solute binding protein 577874 5291709 Cbei_0477 Clostridium beijerinckii NCIMB 8052 periplasmic solute binding protein YP_001307621.1 576978 D 290402 CDS YP_001307622.1 150015368 5291710 578373..580163 1 NC_009617.1 PFAM: DNA mismatch repair protein MutS domain protein; KEGG: cpr:CPR_2123 MutS domain protein; DNA mismatch repair protein MutS domain-containing protein 580163 5291710 Cbei_0478 Clostridium beijerinckii NCIMB 8052 DNA mismatch repair protein MutS domain-containing protein YP_001307622.1 578373 D 290402 CDS YP_001307623.1 150015369 5291711 580211..581122 1 NC_009617.1 PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: cpr:CPR_2121 exonuclease family protein; exonuclease 581122 5291711 Cbei_0479 Clostridium beijerinckii NCIMB 8052 exonuclease YP_001307623.1 580211 D 290402 CDS YP_001307624.1 150015370 5291712 581241..581690 1 NC_009617.1 PFAM: CBS domain containing protein; KEGG: cpr:CPR_2120 two CBS domain containing protein; hypothetical protein 581690 5291712 Cbei_0480 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307624.1 581241 D 290402 CDS YP_001307625.1 150015371 5291713 complement(581877..582536) 1 NC_009617.1 KEGG: cac:CAC0312 hypothetical protein; hypothetical protein 582536 5291713 Cbei_0481 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307625.1 581877 R 290402 CDS YP_001307626.1 150015372 5291714 complement(582547..583197) 1 NC_009617.1 PFAM: PspA/IM30 family protein; KEGG: cac:CAC0313 phage shock protein A; phage shock protein A 583197 5291714 Cbei_0482 Clostridium beijerinckii NCIMB 8052 phage shock protein A YP_001307626.1 582547 R 290402 CDS YP_001307627.1 150015373 5291715 complement(583219..583896) 1 NC_009617.1 KEGG: rno:689513 hypothetical protein LOC689513; hypothetical protein 583896 5291715 Cbei_0483 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307627.1 583219 R 290402 CDS YP_001307628.1 150015374 5291716 584264..585418 1 NC_009617.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 585418 rpsA 5291716 rpsA Clostridium beijerinckii NCIMB 8052 30S ribosomal protein S1 YP_001307628.1 584264 D 290402 CDS YP_001307629.1 150015375 5291717 complement(585491..586909) 1 NC_009617.1 TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; KEGG: cpf:CPF_2404 pyruvate kinase; pyruvate kinase 586909 5291717 Cbei_0485 Clostridium beijerinckii NCIMB 8052 pyruvate kinase YP_001307629.1 585491 R 290402 CDS YP_001307630.1 150015376 5291718 587073..588530 1 NC_009617.1 TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: cpf:CPF_2403 aminoacyl-histidine dipeptidase; aminoacyl-histidine dipeptidase 588530 5291718 Cbei_0486 Clostridium beijerinckii NCIMB 8052 aminoacyl-histidine dipeptidase YP_001307630.1 587073 D 290402 CDS YP_001307631.1 150015377 5291719 588897..589490 1 NC_009617.1 PFAM: NLP/P60 protein; KEGG: ctc:CTC02078 hypothetical lipoprotein; NLP/P60 protein 589490 5291719 Cbei_0487 Clostridium beijerinckii NCIMB 8052 NLP/P60 protein YP_001307631.1 588897 D 290402 CDS YP_001307632.1 150015378 5291720 589833..590507 1 NC_009617.1 KEGG: cno:NT01CX_1684 hypothetical protein; hypothetical protein 590507 5291720 Cbei_0488 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307632.1 589833 D 290402 CDS YP_001307633.1 150015379 5291721 590802..591368 1 NC_009617.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 591368 5291721 Cbei_0489 Clostridium beijerinckii NCIMB 8052 Maf-like protein YP_001307633.1 590802 D 290402 CDS YP_001307634.1 150015380 5291722 591420..592109 1 NC_009617.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 592109 radC 5291722 radC Clostridium beijerinckii NCIMB 8052 DNA repair protein RadC YP_001307634.1 591420 D 290402 CDS YP_001307635.1 150015381 5291723 592130..593146 1 NC_009617.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 593146 5291723 Cbei_0491 Clostridium beijerinckii NCIMB 8052 rod shape-determining protein MreB YP_001307635.1 592130 D 290402 CDS YP_001307636.1 150015382 5291724 593149..593997 1 NC_009617.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 593997 5291724 Cbei_0492 Clostridium beijerinckii NCIMB 8052 rod shape-determining protein MreC YP_001307636.1 593149 D 290402 CDS YP_001307637.1 150015383 5291725 594007..594498 1 NC_009617.1 KEGG: cpr:CPR_2108 rod shape-determining protein MreD; rod shape-determining protein MreD 594498 5291725 Cbei_0493 Clostridium beijerinckii NCIMB 8052 rod shape-determining protein MreD YP_001307637.1 594007 D 290402 CDS YP_001307638.1 150015384 5291726 594495..597392 1 NC_009617.1 PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: cpr:CPR_2107 penicillin-binding protein dimerisation domain family; penicillin-binding protein, transpeptidase 597392 5291726 Cbei_0494 Clostridium beijerinckii NCIMB 8052 penicillin-binding protein, transpeptidase YP_001307638.1 594495 D 290402 CDS YP_001307639.1 150015385 5291727 597550..598230 1 NC_009617.1 Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A 598230 5291727 Cbei_0495 Clostridium beijerinckii NCIMB 8052 sugar fermentation stimulation protein A YP_001307639.1 597550 D 290402 CDS YP_001307640.1 150015386 5291728 598430..599089 1 NC_009617.1 blocks the formation of polar Z-ring septums; septum formation inhibitor 599089 minC 5291728 minC Clostridium beijerinckii NCIMB 8052 septum formation inhibitor YP_001307640.1 598430 D 290402 CDS YP_001307641.1 150015387 5291729 599110..599910 1 NC_009617.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: cpr:CPR_2105 septum site-determining protein MinD; septum site-determining protein MinD 599910 5291729 Cbei_0497 Clostridium beijerinckii NCIMB 8052 septum site-determining protein MinD YP_001307641.1 599110 D 290402 CDS YP_001307642.1 150015388 5291730 599925..600194 1 NC_009617.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 600194 5291730 Cbei_0498 Clostridium beijerinckii NCIMB 8052 cell division topological specificity factor MinE YP_001307642.1 599925 D 290402 CDS YP_001307643.1 150015389 5291731 600464..601594 1 NC_009617.1 PFAM: cell cycle protein; KEGG: cpe:CPE2136 stage V sporulation protein E; cell cycle protein 601594 5291731 Cbei_0499 Clostridium beijerinckii NCIMB 8052 cell cycle protein YP_001307643.1 600464 D 290402 CDS YP_001307644.1 150015390 5291732 602012..602488 1 NC_009617.1 KEGG: cno:NT01CX_0087 cell wall endopeptidase, family M23/M37; hypothetical protein 602488 5291732 Cbei_0500 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307644.1 602012 D 290402 CDS YP_001307645.1 150015391 5291733 602608..603465 1 NC_009617.1 PFAM: peptidase M50; KEGG: cno:NT01CX_0086 sterol-regulatory element binding protein (SREBP) site 2 protease; peptidase M50 603465 5291733 Cbei_0501 Clostridium beijerinckii NCIMB 8052 peptidase M50 YP_001307645.1 602608 D 290402 CDS YP_001307646.1 150015392 5291734 603663..604262 1 NC_009617.1 KEGG: cpr:CPR_1376 hypothetical protein; hypothetical protein 604262 5291734 Cbei_0502 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307646.1 603663 D 290402 CDS YP_001307647.1 150015393 5291735 604514..606604 1 NC_009617.1 PFAM: S-layer domain protein domain protein; Propeptide, PepSY amd peptidase M4; KEGG: cth:Cthe_2168 propeptide, PepSY amd peptidase M4; S-layer protein 606604 5291735 Cbei_0503 Clostridium beijerinckii NCIMB 8052 S-layer protein YP_001307647.1 604514 D 290402 CDS YP_001307648.1 150015394 5291736 606771..611006 1 NC_009617.1 KEGG: mpe:MYPE1550 predicted cytoskeletal protein; hypothetical protein 611006 5291736 Cbei_0504 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307648.1 606771 D 290402 CDS YP_001307649.1 150015395 5291737 611267..613123 1 NC_009617.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cpr:CPR_2100 radical SAM domain protein; radical SAM domain-containing protein 613123 5291737 Cbei_0505 Clostridium beijerinckii NCIMB 8052 radical SAM domain-containing protein YP_001307649.1 611267 D 290402 CDS YP_001307650.1 150015396 5291738 613107..613808 1 NC_009617.1 KEGG: cpe:CPE2132 hypothetical protein; hypothetical protein 613808 5291738 Cbei_0506 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307650.1 613107 D 290402 CDS YP_001307651.1 150015397 5291739 613999..615447 1 NC_009617.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: cpf:CPF_2386 ribonuclease, Rne/Rng family; ribonuclease 615447 5291739 Cbei_0507 Clostridium beijerinckii NCIMB 8052 ribonuclease YP_001307651.1 613999 D 290402 CDS YP_001307652.1 150015398 5291740 615623..615934 1 NC_009617.1 PFAM: ribosomal protein L21; KEGG: cpr:CPR_2097 ribosomal protein L21; 50S ribosomal protein L21 615934 rplU 5291740 rplU Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L21 YP_001307652.1 615623 D 290402 CDS YP_001307653.1 150015399 5291741 615942..616328 1 NC_009617.1 PFAM: protein of unknown function DUF464; KEGG: cpf:CPF_2384 hypothetical protein; hypothetical protein 616328 5291741 Cbei_0509 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307653.1 615942 D 290402 CDS YP_001307654.1 150015400 5291742 616333..616632 1 NC_009617.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 616632 rpmA 5291742 rpmA Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L27 YP_001307654.1 616333 D 290402 CDS YP_001307655.1 150015401 5291743 616934..618226 1 NC_009617.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 618226 obgE 5291743 obgE Clostridium beijerinckii NCIMB 8052 GTPase ObgE YP_001307655.1 616934 D 290402 CDS YP_001307656.1 150015402 5291744 618374..618676 1 NC_009617.1 PFAM: protein of unknown function UPF0044; KEGG: cpr:CPR_2093 RNA-binding protein; hypothetical protein 618676 5291744 Cbei_0512 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307656.1 618374 D 290402 CDS YP_001307657.1 150015403 5291745 618839..619453 1 NC_009617.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 619453 nadD 5291745 nadD Clostridium beijerinckii NCIMB 8052 nicotinic acid mononucleotide adenylyltransferase YP_001307657.1 618839 D 290402 CDS YP_001307658.1 150015404 5291746 619540..620118 1 NC_009617.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cpr:CPR_2091 HD domain protein; metal dependent phosphohydrolase 620118 5291746 Cbei_0514 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001307658.1 619540 D 290402 CDS YP_001307659.1 150015405 5291747 620218..621510 1 NC_009617.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: cpr:CPR_2090 transcription regulator LytR-like protein lin0463; cell envelope-related transcriptional attenuator 621510 5291747 Cbei_0515 Clostridium beijerinckii NCIMB 8052 cell envelope-related transcriptional attenuator YP_001307659.1 620218 D 290402 CDS YP_001307660.1 150015406 5291748 621712..622611 1 NC_009617.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; KEGG: cpe:CPE2122 conserved hypothetical protein; RluA family pseudouridine synthase 622611 5291748 Cbei_0516 Clostridium beijerinckii NCIMB 8052 RluA family pseudouridine synthase YP_001307660.1 621712 D 290402 CDS YP_001307661.1 150015407 5291749 complement(622686..623660) 1 NC_009617.1 PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: cac:CAC0023 transcriptional regulator, LysR family; LysR family transcriptional regulator 623660 5291749 Cbei_0517 Clostridium beijerinckii NCIMB 8052 LysR family transcriptional regulator YP_001307661.1 622686 R 290402 CDS YP_001307662.1 150015408 5291750 623704..624789 1 NC_009617.1 catalyzes the formation of aspartate semialdehyde from aspartyl phosphate; aspartate-semialdehyde dehydrogenase 624789 5291750 Cbei_0518 Clostridium beijerinckii NCIMB 8052 aspartate-semialdehyde dehydrogenase YP_001307662.1 623704 D 290402 CDS YP_001307663.1 150015409 5291751 complement(624853..626088) 1 NC_009617.1 PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; KEGG: cno:NT01CX_0071 D-alanyl-D-alanine carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 626088 5291751 Cbei_0519 Clostridium beijerinckii NCIMB 8052 serine-type D-Ala-D-Ala carboxypeptidase YP_001307663.1 624853 R 290402 CDS YP_001307664.1 150015410 5291752 626254..626940 1 NC_009617.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; KEGG: cpf:CPF_2375 ComE operon protein 1; helix-hairpin-helix repeat-containing competence protein ComEA 626940 5291752 Cbei_0520 Clostridium beijerinckii NCIMB 8052 helix-hairpin-helix repeat-containing competence protein ComEA YP_001307664.1 626254 D 290402 CDS YP_001307665.1 150015411 5291753 627218..627910 1 NC_009617.1 hypothetical protein 627910 5291753 Cbei_0521 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307665.1 627218 D 290402 CDS YP_001307666.1 150015412 5291754 627931..628329 1 NC_009617.1 hypothetical protein 628329 5291754 Cbei_0522 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307666.1 627931 D 290402 CDS YP_001307667.1 150015413 5291755 628440..629798 1 NC_009617.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; DNA methylase N-4/N-6 domain protein; conserved hypothetical protein 95; methyltransferase small; (Uracil-5)-methyltransferase; KEGG: cpf:CPF_2370 23S rRNA (uracil-5-)-methyltransferase RumA; RNA methyltransferase 629798 5291755 Cbei_0523 Clostridium beijerinckii NCIMB 8052 RNA methyltransferase YP_001307667.1 628440 D 290402 CDS YP_001307668.1 150015414 5291756 630782..632806 1 NC_009617.1 PFAM: PRD domain protein; Helix-turn-helix, type 11 domain protein; KEGG: tte:TTE0598 transcriptional regulator; transcriptional antiterminator BglG 632806 5291756 Cbei_0524 Clostridium beijerinckii NCIMB 8052 transcriptional antiterminator BglG YP_001307668.1 630782 D 290402 CDS YP_001307669.1 150015415 5291757 632825..633253 1 NC_009617.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: gka:GK2018 hypothetical protein; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 633253 5291757 Cbei_0525 Clostridium beijerinckii NCIMB 8052 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_001307669.1 632825 D 290402 CDS YP_001307670.1 150015416 5291758 633247..634005 1 NC_009617.1 KEGG: vpa:VPA0504 hypothetical protein; fructose transport system kinase 634005 frcK 5291758 frcK Clostridium beijerinckii NCIMB 8052 fructose transport system kinase YP_001307670.1 633247 D 290402 CDS YP_001307671.1 150015417 5291759 634005..635450 1 NC_009617.1 TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphotransferase system, EIIC; phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: vpa:VPA0501 mannitol-specific PTS system enzyme II component; PTS system mannitol-specific transporter subunit IIC 635450 5291759 Cbei_0527 Clostridium beijerinckii NCIMB 8052 PTS system mannitol-specific transporter subunit IIC YP_001307671.1 634005 D 290402 CDS YP_001307672.1 150015418 5291760 635472..636719 1 NC_009617.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: vpa:VPA0502 oxidoreductase; alcohol dehydrogenase 636719 5291760 Cbei_0528 Clostridium beijerinckii NCIMB 8052 alcohol dehydrogenase YP_001307672.1 635472 D 290402 CDS YP_001307673.1 150015419 5291761 636881..637588 1 NC_009617.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: ctc:CTC01227 ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 637588 5291761 Cbei_0529 Clostridium beijerinckii NCIMB 8052 ribulose-phosphate 3-epimerase YP_001307673.1 636881 D 290402 CDS YP_001307674.1 150015420 5291762 637590..638150 1 NC_009617.1 PFAM: sugar isomerase (SIS); KEGG: bsu:BG11182 6-phospho-3-hexuloisomerase; sugar isomerase (SIS) 638150 5291762 Cbei_0530 Clostridium beijerinckii NCIMB 8052 sugar isomerase (SIS) YP_001307674.1 637590 D 290402 CDS YP_001307675.1 150015421 5291763 638171..639352 1 NC_009617.1 PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain; KEGG: bld:BLi00507 mannitol-1-phosphate dehydrogenase; RBL03232; mannitol dehydrogenase domain-containing protein 639352 5291763 Cbei_0531 Clostridium beijerinckii NCIMB 8052 mannitol dehydrogenase domain-containing protein YP_001307675.1 638171 D 290402 CDS YP_001307676.1 150015422 5291764 640021..642012 1 NC_009617.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; KEGG: cac:CAC1348 transketolase, TKT; transketolase 642012 5291764 Cbei_0532 Clostridium beijerinckii NCIMB 8052 transketolase YP_001307676.1 640021 D 290402 CDS YP_001307677.1 150015423 5291765 642299..642466 1 NC_009617.1 KEGG: cth:Cthe_1700 recombinase; recombinase 642466 5291765 Cbei_0533 Clostridium beijerinckii NCIMB 8052 recombinase YP_001307677.1 642299 D 290402 CDS YP_001307678.1 150015424 5291766 642607..643284 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dsy:DSY3639 hypothetical protein; two component transcriptional regulator 643284 5291766 Cbei_0534 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001307678.1 642607 D 290402 CDS YP_001307679.1 150015425 5291767 643281..644354 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: dsy:DSY3638 hypothetical protein; integral membrane sensor signal transduction histidine kinase 644354 5291767 Cbei_0535 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001307679.1 643281 D 290402 CDS YP_001307680.1 150015426 5291768 644608..645987 1 NC_009617.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: lwe:lwe0973 MatE family efflux protein; MATE efflux family protein 645987 5291768 Cbei_0536 Clostridium beijerinckii NCIMB 8052 MATE efflux family protein YP_001307680.1 644608 D 290402 CDS YP_001307681.1 150015427 5291769 646716..647081 1 NC_009617.1 PFAM: response regulator receiver; KEGG: swo:Swol_0863 response regulator receiver protein; response regulator receiver protein 647081 5291769 Cbei_0537 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001307681.1 646716 D 290402 CDS YP_001307682.1 150015428 5291770 647395..647652 1 NC_009617.1 hypothetical protein 647652 5291770 Cbei_0538 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307682.1 647395 D 290402 CDS YP_001307683.1 150015429 5291771 complement(648029..648436) 1 NC_009617.1 hypothetical protein 648436 5291771 Cbei_0539 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307683.1 648029 R 290402 CDS YP_001307684.1 150015430 5291772 648740..651622 1 NC_009617.1 PFAM: sigma-54 factor, interaction domain-containing protein; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PTS system fructose subfamily IIA component; PRD domain protein; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; KEGG: tte:TTE0180 NtrC family transcriptional regulator, ATPase domain; sigma-54 factor interaction domain-containing protein 651622 5291772 Cbei_0540 Clostridium beijerinckii NCIMB 8052 sigma-54 factor interaction domain-containing protein YP_001307684.1 648740 D 290402 CDS YP_001307685.1 150015431 5291773 651641..652087 1 NC_009617.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: lwe:lwe0346 PTS system, IIA component; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 652087 5291773 Cbei_0541 Clostridium beijerinckii NCIMB 8052 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_001307685.1 651641 D 290402 CDS YP_001307686.1 150015432 5291774 652146..652448 1 NC_009617.1 KEGG: lwe:lwe0348 PTS system, galactitol-specific IIB component; PTS system galactitol-specific transporter subunit IIB 652448 5291774 Cbei_0542 Clostridium beijerinckii NCIMB 8052 PTS system galactitol-specific transporter subunit IIB YP_001307686.1 652146 D 290402 CDS YP_001307687.1 150015433 5291775 652480..653898 1 NC_009617.1 PFAM: PTS system Galactitol-specific IIC component; KEGG: lwe:lwe0349 PTS system, galactitol-specific IIC component; PTS system galactitol-specific transporter subunit IIC 653898 5291775 Cbei_0543 Clostridium beijerinckii NCIMB 8052 PTS system galactitol-specific transporter subunit IIC YP_001307687.1 652480 D 290402 CDS YP_001307688.1 150015434 5291776 654305..655351 1 NC_009617.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: lmf:LMOf2365_0535 alcohol dehydrogenase, zinc-dependent; alcohol dehydrogenase 655351 5291776 Cbei_0544 Clostridium beijerinckii NCIMB 8052 alcohol dehydrogenase YP_001307688.1 654305 D 290402 CDS YP_001307689.1 150015435 5291777 655365..656183 1 NC_009617.1 PFAM: Transketolase domain protein; KEGG: cpf:CPF_0292 transketolase, N-terminal subunit; transketolase domain-containing protein 656183 5291777 Cbei_0545 Clostridium beijerinckii NCIMB 8052 transketolase domain-containing protein YP_001307689.1 655365 D 290402 CDS YP_001307690.1 150015436 5291778 656183..657100 1 NC_009617.1 PFAM: Transketolase, central region; Transketolase domain protein; KEGG: cpr:CPR_0288 transketolase; transketolase, central region 657100 5291778 Cbei_0546 Clostridium beijerinckii NCIMB 8052 transketolase, central region YP_001307690.1 656183 D 290402 CDS YP_001307691.1 150015437 5291779 657116..657775 1 NC_009617.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: tte:TTE1498 Pentose-5-phosphate-3-epimerase; ribulose-phosphate 3-epimerase 657775 5291779 Cbei_0547 Clostridium beijerinckii NCIMB 8052 ribulose-phosphate 3-epimerase YP_001307691.1 657116 D 290402 CDS YP_001307692.1 150015438 5291780 657807..658250 1 NC_009617.1 TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; KEGG: tte:TTE0146 ribose 5-phosphate isomerase B; RpiB/LacA/LacB family sugar-phosphate isomerase 658250 5291780 Cbei_0548 Clostridium beijerinckii NCIMB 8052 RpiB/LacA/LacB family sugar-phosphate isomerase YP_001307692.1 657807 D 290402 CDS YP_001307693.1 150015439 5291781 658277..658966 1 NC_009617.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 658966 araD 5291781 araD Clostridium beijerinckii NCIMB 8052 L-ribulose-5-phosphate 4-epimerase YP_001307693.1 658277 D 290402 CDS YP_001307694.1 150015440 5291782 659070..660635 1 NC_009617.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: lwe:lwe1891 phosphoglucomutase/phosphomannomutase family protein; phosphomannomutase 660635 5291782 Cbei_0550 Clostridium beijerinckii NCIMB 8052 phosphomannomutase YP_001307694.1 659070 D 290402 CDS YP_001307695.1 150015441 5296324 661750..662583 1 NC_009617.1 KEGG: mst:Msp_0992 endonuclease IV; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease, family 2; apurinic endonuclease Apn1 662583 5296324 Cbei_0552 Clostridium beijerinckii NCIMB 8052 apurinic endonuclease Apn1 YP_001307695.1 661750 D 290402 CDS YP_001307696.1 150015442 5291784 662757..663437 1 NC_009617.1 PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: cpe:CPE1567 probable peptidyl-prolyl cis-trans isomerase B; peptidyl-prolyl isomerase 663437 5291784 Cbei_0553 Clostridium beijerinckii NCIMB 8052 peptidyl-prolyl isomerase YP_001307696.1 662757 D 290402 CDS YP_001307697.1 150015443 5291785 complement(663537..665333) 1 NC_009617.1 PFAM: carbon starvation protein CstA; KEGG: cac:CAC1669 carbon starvation protein; carbon starvation protein CstA 665333 5291785 Cbei_0554 Clostridium beijerinckii NCIMB 8052 carbon starvation protein CstA YP_001307697.1 663537 R 290402 CDS YP_001307698.1 150015444 5291786 665554..666747 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type, transmembrane region; KEGG: ctc:CTC01978 two-component sensor histidine kinase; signal transduction histidine kinase LytS 666747 5291786 Cbei_0555 Clostridium beijerinckii NCIMB 8052 signal transduction histidine kinase LytS YP_001307698.1 665554 D 290402 CDS YP_001307699.1 150015445 5291787 666775..667533 1 NC_009617.1 PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: ctc:CTC01979 transcriptional regulatory protein; LytTR family two component transcriptional regulator 667533 5291787 Cbei_0556 Clostridium beijerinckii NCIMB 8052 LytTR family two component transcriptional regulator YP_001307699.1 666775 D 290402 CDS YP_001307700.1 150015446 5291788 complement(667762..668130) 1 NC_009617.1 PFAM: regulatory protein, MerR; Transcription regulator MerR, DNA binding; KEGG: cac:CA_P0107 HTH transcriptional regulator MerR family; MerR family transcriptional regulator 668130 5291788 Cbei_0557 Clostridium beijerinckii NCIMB 8052 MerR family transcriptional regulator YP_001307700.1 667762 R 290402 CDS YP_001307701.1 150015447 5291789 668438..669595 1 NC_009617.1 PFAM: aldo/keto reductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mma:MM1948 oxidoreductase, aldo/keto reductase family; aldo/keto reductase 669595 5291789 Cbei_0558 Clostridium beijerinckii NCIMB 8052 aldo/keto reductase YP_001307701.1 668438 D 290402 CDS YP_001307702.1 150015448 5291790 669777..671183 1 NC_009617.1 PFAM: protein of unknown function DUF111; KEGG: cac:CAC0774 hypothetical protein; hypothetical protein 671183 5291790 Cbei_0559 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307702.1 669777 D 290402 CDS YP_001307703.1 150015449 5291791 671239..672063 1 NC_009617.1 PFAM: ExsB family protein; PP-loop domain protein; KEGG: cac:CAC0775 ATP-utilizing enzyme of the PP-loop superfamily; ExsB family protein 672063 5291791 Cbei_0560 Clostridium beijerinckii NCIMB 8052 ExsB family protein YP_001307703.1 671239 D 290402 CDS YP_001307704.1 150015450 5291792 672132..672878 1 NC_009617.1 KEGG: cac:CAC0776 NCAIR mutase (PurE)-related protein; NCAIR mutase (PurE)-like protein 672878 5291792 Cbei_0561 Clostridium beijerinckii NCIMB 8052 NCAIR mutase (PurE)-like protein YP_001307704.1 672132 D 290402 CDS YP_001307705.1 150015451 5291793 672996..674036 1 NC_009617.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: tte:TTE0012 NADH:flavin oxidoreductases, Old Yellow Enzyme family; NADH:flavin oxidoreductase 674036 5291793 Cbei_0562 Clostridium beijerinckii NCIMB 8052 NADH:flavin oxidoreductase YP_001307705.1 672996 D 290402 CDS YP_001307706.1 150015452 5291794 674151..674297 1 NC_009617.1 KEGG: cac:CAC0143 hypothetical protein; hypothetical protein 674297 5291794 Cbei_0563 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307706.1 674151 D 290402 CDS YP_001307707.1 150015453 5291795 674452..674877 1 NC_009617.1 hypothetical protein 674877 5291795 Cbei_0564 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307707.1 674452 D 290402 CDS YP_001307708.1 150015454 5291796 674960..675097 1 NC_009617.1 KEGG: cpf:CPF_1219 hypothetical protein; hypothetical protein 675097 5291796 Cbei_0565 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307708.1 674960 D 290402 CDS YP_001307709.1 150015455 5291797 675552..677480 1 NC_009617.1 PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: cac:CAC0579 serine protein kinase (PrkA protein), P-loop containing; serine protein kinase PrkA 677480 5291797 Cbei_0566 Clostridium beijerinckii NCIMB 8052 serine protein kinase PrkA YP_001307709.1 675552 D 290402 CDS YP_001307710.1 150015456 5291798 677489..678661 1 NC_009617.1 TIGRFAM: Sporulation protein YhbH; PFAM: protein of unknown function DUF444; KEGG: cpe:CPE1333 hypothetical protein; hypothetical protein 678661 5291798 Cbei_0567 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307710.1 677489 D 290402 CDS YP_001307711.1 150015457 5291799 678666..680036 1 NC_009617.1 PFAM: SpoVR family protein; KEGG: cpf:CPF_1539 stage V sporulation protein R; SpoVR family protein 680036 5291799 Cbei_0568 Clostridium beijerinckii NCIMB 8052 SpoVR family protein YP_001307711.1 678666 D 290402 CDS YP_001307712.1 150015458 5291800 680187..680729 1 NC_009617.1 PFAM: Rubrerythrin; KEGG: cpr:CPR_1331 rubrerythrin; rubrerythrin 680729 5291800 Cbei_0569 Clostridium beijerinckii NCIMB 8052 rubrerythrin YP_001307712.1 680187 D 290402 CDS YP_001307713.1 150015459 5291801 680741..681097 1 NC_009617.1 hypothetical protein 681097 5291801 Cbei_0570 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307713.1 680741 D 290402 CDS YP_001307714.1 150015460 5291802 681183..681527 1 NC_009617.1 KEGG: cpe:CPE1330 hypothetical protein; hypothetical protein 681527 5291802 Cbei_0571 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307714.1 681183 D 290402 CDS YP_001307715.1 150015461 5291803 complement(681597..682124) 1 NC_009617.1 TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cpr:CPR_1329 CDP-diacylglycerol--serine O-phosphatidyltransferase; CDP-diacylglycerol--serine O-phosphatidyltransferase 682124 5291803 Cbei_0572 Clostridium beijerinckii NCIMB 8052 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_001307715.1 681597 R 290402 CDS YP_001307716.1 150015462 5291804 682422..683300 1 NC_009617.1 similar to YegS from E. coli; lipid kinase 683300 5291804 Cbei_0573 Clostridium beijerinckii NCIMB 8052 lipid kinase YP_001307716.1 682422 D 290402 CDS YP_001307717.1 150015463 5291805 683352..684017 1 NC_009617.1 KEGG: cno:NT01CX_1387 hypothetical protein; hypothetical protein 684017 5291805 Cbei_0574 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307717.1 683352 D 290402 CDS YP_001307718.1 150015464 5291806 complement(684191..686194) 1 NC_009617.1 PFAM: Radical SAM N-terminal domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cno:NT01CX_1388 radical SAM domain protein; hypothetical protein 686194 5291806 Cbei_0575 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307718.1 684191 R 290402 CDS YP_001307719.1 150015465 5291807 686755..688002 1 NC_009617.1 PFAM: CBS domain containing protein; MgtE intracellular region; PRC-barrel domain protein; KEGG: cpf:CPF_1530 CBS domain/MgtE intracellular domain protein; MgtE integral membrane protein 688002 5291807 Cbei_0576 Clostridium beijerinckii NCIMB 8052 MgtE integral membrane protein YP_001307719.1 686755 D 290402 CDS YP_001307720.1 150015466 5291808 688574..689485 1 NC_009617.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein, beta subunit; KEGG: cpr:CPR_1322 cysteine synthase A; cysteine synthase 689485 5291808 Cbei_0577 Clostridium beijerinckii NCIMB 8052 cysteine synthase YP_001307720.1 688574 D 290402 CDS YP_001307721.1 150015467 5291809 689626..690216 1 NC_009617.1 TIGRFAM: serine O-acetyltransferase; KEGG: cpr:CPR_1321 serine O-acetyltransferase; serine O-acetyltransferase 690216 5291809 Cbei_0578 Clostridium beijerinckii NCIMB 8052 serine O-acetyltransferase YP_001307721.1 689626 D 290402 CDS YP_001307722.1 150015468 5291810 690743..691447 1 NC_009617.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: ctc:CTC00354 1-acyl-sn-glycerol-3-phosphate acyltransferase; phospholipid/glycerol acyltransferase 691447 5291810 Cbei_0579 Clostridium beijerinckii NCIMB 8052 phospholipid/glycerol acyltransferase YP_001307722.1 690743 D 290402 CDS YP_001307723.1 150015469 5291811 691464..692096 1 NC_009617.1 TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; KEGG: cpr:CPR_1318 endonuclease III; endonuclease III 692096 5291811 Cbei_0580 Clostridium beijerinckii NCIMB 8052 endonuclease III YP_001307723.1 691464 D 290402 CDS YP_001307724.1 150015470 5291812 692252..693157 1 NC_009617.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 693157 ddl 5291812 ddl Clostridium beijerinckii NCIMB 8052 D-alanine--D-alanine ligase YP_001307724.1 692252 D 290402 CDS YP_001307725.1 150015471 5291813 complement(693325..693738) 1 NC_009617.1 PFAM: ferric-uptake regulator; KEGG: cac:CAC0951 ferric uptake regulation protein; ferric uptake regulator family protein 693738 5291813 Cbei_0582 Clostridium beijerinckii NCIMB 8052 ferric uptake regulator family protein YP_001307725.1 693325 R 290402 CDS YP_001307726.1 150015472 5291814 complement(693796..694347) 1 NC_009617.1 KEGG: cac:CAC0950 predicted membrane protein; membrane protein 694347 5291814 Cbei_0583 Clostridium beijerinckii NCIMB 8052 membrane protein YP_001307726.1 693796 R 290402 CDS YP_001307727.1 150015473 5291815 694536..695753 1 NC_009617.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 695753 5291815 Cbei_0584 Clostridium beijerinckii NCIMB 8052 6-phosphofructokinase YP_001307727.1 694536 D 290402 CDS YP_001307728.1 150015474 5291816 complement(695918..697222) 1 NC_009617.1 PFAM: aminotransferase, class V; KEGG: cpf:CPF_1720 aminotransferase, class V; cysteine desulfurase 697222 5291816 Cbei_0585 Clostridium beijerinckii NCIMB 8052 cysteine desulfurase YP_001307728.1 695918 R 290402 CDS YP_001307729.1 150015475 5291817 697387..697866 1 NC_009617.1 hypothetical protein 697866 5291817 Cbei_0586 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307729.1 697387 D 290402 CDS YP_001307730.1 150015476 5291818 complement(697977..698591) 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: bld:BLi02242 TetR; TetR family transcriptional regulator 698591 5291818 Cbei_0587 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001307730.1 697977 R 290402 CDS YP_001307731.1 150015477 5291819 698852..700771 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_1721 ABC transporter ATP-binding protein; ABC transporter 700771 5291819 Cbei_0588 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001307731.1 698852 D 290402 CDS YP_001307732.1 150015478 5291820 701123..701830 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ctc:CTC00805 two-component response regulator; two component transcriptional regulator 701830 5291820 Cbei_0589 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001307732.1 701123 D 290402 CDS YP_001307733.1 150015479 5291821 701820..703328 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: ctc:CTC00806 sensory transduction protein kinase; integral membrane sensor signal transduction histidine kinase 703328 5291821 Cbei_0590 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001307733.1 701820 D 290402 CDS YP_001307734.1 150015480 5291822 703407..704348 1 NC_009617.1 PFAM: glycoside hydrolase, family 25; KEGG: cpe:CPE1314 muramidase; glycoside hydrolase 704348 5291822 Cbei_0591 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001307734.1 703407 D 290402 CDS YP_001307735.1 150015481 5291823 704537..706033 1 NC_009617.1 PFAM: VanW family protein; G5 domain protein; KEGG: cpe:CPE1313 hypothetical protein; VanW family protein 706033 5291823 Cbei_0592 Clostridium beijerinckii NCIMB 8052 VanW family protein YP_001307735.1 704537 D 290402 CDS YP_001307736.1 150015482 5291824 706279..706767 1 NC_009617.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: cpf:CPF_1518 RNA methyltransferase, TrmH family, group 2; tRNA/rRNA methyltransferase SpoU 706767 5291824 Cbei_0593 Clostridium beijerinckii NCIMB 8052 tRNA/rRNA methyltransferase SpoU YP_001307736.1 706279 D 290402 CDS YP_001307737.1 150015483 5291825 706788..707624 1 NC_009617.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: cpr:CPR_1307 DegV family protein; degV family protein 707624 5291825 Cbei_0594 Clostridium beijerinckii NCIMB 8052 degV family protein YP_001307737.1 706788 D 290402 CDS YP_001307738.1 150015484 5291826 707868..709259 1 NC_009617.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 709259 5291826 Cbei_0595 Clostridium beijerinckii NCIMB 8052 RNA polymerase factor sigma-54 YP_001307738.1 707868 D 290402 CDS YP_001307739.1 150015485 5291827 709642..710691 1 NC_009617.1 PFAM: sugar-binding domain protein; KEGG: cpe:CPE1305 probable transcriptional regulator; DeoR family transcriptional regulator 710691 5291827 Cbei_0596 Clostridium beijerinckii NCIMB 8052 DeoR family transcriptional regulator YP_001307739.1 709642 D 290402 CDS YP_001307740.1 150015486 5291828 710763..711764 1 NC_009617.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: cpr:CPR_1301 glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase, type I 711764 5291828 Cbei_0597 Clostridium beijerinckii NCIMB 8052 glyceraldehyde-3-phosphate dehydrogenase, type I YP_001307740.1 710763 D 290402 CDS YP_001307741.1 150015487 5291829 711905..713080 1 NC_009617.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 713080 pgk 5291829 pgk Clostridium beijerinckii NCIMB 8052 phosphoglycerate kinase YP_001307741.1 711905 D 290402 CDS YP_001307742.1 150015488 5291830 713513..714259 1 NC_009617.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 714259 tpiA 5291830 tpiA Clostridium beijerinckii NCIMB 8052 triosephosphate isomerase YP_001307742.1 713513 D 290402 CDS YP_001307743.1 150015489 5291831 714589..716127 1 NC_009617.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 716127 5291831 Cbei_0600 Clostridium beijerinckii NCIMB 8052 phosphoglyceromutase YP_001307743.1 714589 D 290402 CDS YP_001307744.1 150015490 5291832 716507..717112 1 NC_009617.1 KEGG: cpf:CPF_2245 hypothetical protein; hypothetical protein 717112 5291832 Cbei_0601 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307744.1 716507 D 290402 CDS YP_001307745.1 150015491 5291833 717501..718793 1 NC_009617.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 718793 eno 5291833 eno Clostridium beijerinckii NCIMB 8052 phosphopyruvate hydratase YP_001307745.1 717501 D 290402 CDS YP_001307746.1 150015492 5291834 719014..719247 1 NC_009617.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: cpr:CPR_1293 preprotein translocase, SecG subunit; preprotein translocase subunit SecG 719247 secG 5291834 secG Clostridium beijerinckii NCIMB 8052 preprotein translocase subunit SecG YP_001307746.1 719014 D 290402 CDS YP_001307747.1 150015493 5291835 719882..720880 1 NC_009617.1 PFAM: NMT1/THI5 like; SMART: extracellular solute-binding protein, family 3; KEGG: cth:Cthe_1570 extracellular solute-binding protein, family 3; NMT1/THI5-like protein 720880 5291835 Cbei_0604 Clostridium beijerinckii NCIMB 8052 NMT1/THI5-like protein YP_001307747.1 719882 D 290402 CDS YP_001307748.1 150015494 5291836 720900..721952 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cth:Cthe_1571 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 721952 5291836 Cbei_0605 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001307748.1 720900 D 290402 CDS YP_001307749.1 150015495 5291837 721949..722749 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cth:Cthe_1572 ABC transporter protein; ABC transporter 722749 5291837 Cbei_0606 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001307749.1 721949 D 290402 CDS YP_001307750.1 150015496 5291838 722763..725084 1 NC_009617.1 TIGRFAM: ATPase P; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: cth:Cthe_1848 copper-translocating P-type ATPase; heavy metal translocating P-type ATPase 725084 5291838 Cbei_0607 Clostridium beijerinckii NCIMB 8052 heavy metal translocating P-type ATPase YP_001307750.1 722763 D 290402 CDS YP_001307751.1 150015497 5291839 725084..726154 1 NC_009617.1 KEGG: cth:Cthe_1849 heavy metal transport/detoxification protein; heavy metal transport/detoxification protein 726154 5291839 Cbei_0608 Clostridium beijerinckii NCIMB 8052 heavy metal transport/detoxification protein YP_001307751.1 725084 D 290402 CDS YP_001307752.1 150015498 5291840 726500..727789 1 NC_009617.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: bth:BT_2387 O-acetylhomoserine (thiol)-lyase; O-acetylhomoserine/O-acetylserine sulfhydrylase 727789 5291840 Cbei_0609 Clostridium beijerinckii NCIMB 8052 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_001307752.1 726500 D 290402 CDS YP_001307753.1 150015499 5291841 728005..728874 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY1353 hypothetical protein; ABC transporter 728874 5291841 Cbei_0610 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001307753.1 728005 D 290402 CDS YP_001307754.1 150015500 5291842 729094..730083 1 NC_009617.1 KEGG: cth:Cthe_1570 extracellular solute-binding protein, family 3; nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein 730083 5291842 Cbei_0611 Clostridium beijerinckii NCIMB 8052 nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein YP_001307754.1 729094 D 290402 CDS YP_001307755.1 150015501 5291843 730295..731854 1 NC_009617.1 PFAM: oxidoreductase/nitrogenase, component 1; KEGG: rru:Rru_A0794 nitrogenase; nitrogenase 731854 5291843 Cbei_0612 Clostridium beijerinckii NCIMB 8052 nitrogenase YP_001307755.1 730295 D 290402 CDS YP_001307756.1 150015502 5291844 731873..733240 1 NC_009617.1 PFAM: oxidoreductase/nitrogenase, component 1; KEGG: rru:Rru_A0793 nitrogenase; nitrogenase 733240 5291844 Cbei_0613 Clostridium beijerinckii NCIMB 8052 nitrogenase YP_001307756.1 731873 D 290402 CDS YP_001307757.1 150015503 5291845 733301..734062 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msm:MSMEG_1161 taurine transport system permease TauC; binding-protein-dependent transport system inner membrane protein 734062 5291845 Cbei_0614 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001307757.1 733301 D 290402 CDS YP_001307758.1 150015504 5291846 734091..734876 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro04945 ABC transporter permease component; binding-protein-dependent transport system inner membrane protein 734876 5291846 Cbei_0615 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001307758.1 734091 D 290402 CDS YP_001307759.1 150015505 5291847 734901..735995 1 NC_009617.1 KEGG: dsy:DSY1354 hypothetical protein; nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein 735995 5291847 Cbei_0616 Clostridium beijerinckii NCIMB 8052 nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein YP_001307759.1 734901 D 290402 CDS YP_001307760.1 150015506 5291848 735995..736930 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsy:DSY1355 hypothetical protein; binding-protein-dependent transport system inner membrane protein 736930 5291848 Cbei_0617 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001307760.1 735995 D 290402 CDS YP_001307761.1 150015507 5291849 736984..737757 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsy:DSY1355 hypothetical protein; binding-protein-dependent transport system inner membrane protein 737757 5291849 Cbei_0618 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001307761.1 736984 D 290402 CDS YP_001307762.1 150015508 5291850 738754..738906 1 NC_009617.1 KEGG: mta:Moth_1978 hypothetical protein; hypothetical protein 738906 5291850 Cbei_0619 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307762.1 738754 D 290402 CDS YP_001307763.1 150015509 5291851 739188..740669 1 NC_009617.1 PFAM: oxidoreductase/nitrogenase, component 1; KEGG: cth:Cthe_1565 nitrogenase; nitrogenase 740669 5291851 Cbei_0620 Clostridium beijerinckii NCIMB 8052 nitrogenase YP_001307763.1 739188 D 290402 CDS YP_001307764.1 150015510 5291852 740653..741981 1 NC_009617.1 PFAM: oxidoreductase/nitrogenase, component 1; KEGG: cth:Cthe_1566 nitrogenase; nitrogenase 741981 5291852 Cbei_0621 Clostridium beijerinckii NCIMB 8052 nitrogenase YP_001307764.1 740653 D 290402 CDS YP_001307765.1 150015511 5291853 742247..743545 1 NC_009617.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cth:Cthe_1569 O-acetylhomoserine aminocarboxypropyltransferase; cysteine synthase 743545 5291853 Cbei_0622 Clostridium beijerinckii NCIMB 8052 cysteine synthase YP_001307765.1 742247 D 290402 CDS YP_001307766.1 150015512 5291854 743666..744520 1 NC_009617.1 TIGRFAM: nitrogenase iron protein; PFAM: NifH/frxC-family protein; KEGG: cth:Cthe_1573 nitrogenase iron protein; nitrogenase iron protein 744520 5291854 Cbei_0623 Clostridium beijerinckii NCIMB 8052 nitrogenase iron protein YP_001307766.1 743666 D 290402 CDS YP_001307767.1 150015513 5291855 744598..745377 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK2999 ABC transporter (ATP-binding protein); ABC transporter 745377 5291855 Cbei_0624 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001307767.1 744598 D 290402 CDS YP_001307768.1 150015514 5291856 745374..746042 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fnu:FN0659 ABC transporter permease; binding-protein-dependent transport system inner membrane protein 746042 5291856 Cbei_0625 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001307768.1 745374 D 290402 CDS YP_001307769.1 150015515 5291857 746059..746904 1 NC_009617.1 PFAM: NLPA lipoprotein; KEGG: cac:CAC0986 lipoprotein, attached to the cytoplasmic membrane, NLPA family; NLPA lipoprotein 746904 5291857 Cbei_0626 Clostridium beijerinckii NCIMB 8052 NLPA lipoprotein YP_001307769.1 746059 D 290402 CDS YP_001307770.1 150015516 5291858 746918..747265 1 NC_009617.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: mac:MA2936 hypothetical protein; dinitrogenase iron-molybdenum cofactor biosynthesis protein 747265 5291858 Cbei_0627 Clostridium beijerinckii NCIMB 8052 dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_001307770.1 746918 D 290402 CDS YP_001307771.1 150015517 5291859 747403..748275 1 NC_009617.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cth:Cthe_1568 radical SAM; radical SAM domain-containing protein 748275 5291859 Cbei_0628 Clostridium beijerinckii NCIMB 8052 radical SAM domain-containing protein YP_001307771.1 747403 D 290402 CDS YP_001307772.1 150015518 5291860 748519..749679 1 NC_009617.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: cac:CAC0930 cystathionine gamma-synthase; cystathionine gamma-synthase 749679 5291860 Cbei_0629 Clostridium beijerinckii NCIMB 8052 cystathionine gamma-synthase YP_001307772.1 748519 D 290402 CDS YP_001307773.1 150015519 5291861 749676..750590 1 NC_009617.1 PFAM: Pyridoxal-5'-phosphate-dependent protein, beta subunit; KEGG: cac:CAC0931 cysteine synthase; pyridoxal-5'-phosphate-dependent protein subunit beta 750590 5291861 Cbei_0630 Clostridium beijerinckii NCIMB 8052 pyridoxal-5'-phosphate-dependent protein subunit beta YP_001307773.1 749676 D 290402 CDS YP_001307774.1 150015520 5291862 750797..752329 1 NC_009617.1 PFAM: oxidoreductase/nitrogenase, component 1; KEGG: rru:Rru_A0794 nitrogenase; nitrogenase 752329 5291862 Cbei_0631 Clostridium beijerinckii NCIMB 8052 nitrogenase YP_001307774.1 750797 D 290402 CDS YP_001307775.1 150015521 5291863 752355..753713 1 NC_009617.1 PFAM: oxidoreductase/nitrogenase, component 1; KEGG: rru:Rru_A0793 nitrogenase; nitrogenase 753713 5291863 Cbei_0632 Clostridium beijerinckii NCIMB 8052 nitrogenase YP_001307775.1 752355 D 290402 CDS YP_001307776.1 150015522 5291864 754088..756355 1 NC_009617.1 KEGG: cpf:CPF_1502 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B, OB region N-terminal domain; SMART: Cold shock protein; ribonuclease R 756355 5291864 Cbei_0633 Clostridium beijerinckii NCIMB 8052 ribonuclease R YP_001307776.1 754088 D 290402 CDS YP_001307777.1 150015523 5291865 756504..756974 1 NC_009617.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 756974 smpB 5291865 smpB Clostridium beijerinckii NCIMB 8052 SsrA-binding protein YP_001307777.1 756504 D 290402 CDS YP_001307778.1 150015524 5291866 757193..760450 1 NC_009617.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: cac:CAC0353 2,3-cyclic-nucleotide 2'phosphodiesterase (duplication); 5'-nucleotidase domain-containing protein 760450 5291866 Cbei_0635 Clostridium beijerinckii NCIMB 8052 5'-nucleotidase domain-containing protein YP_001307778.1 757193 D 290402 CDS YP_001307779.1 150015525 5291867 761143..762108 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC0984 ABC transporter ATP-binding protein; ABC transporter 762108 5291867 Cbei_0636 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001307779.1 761143 D 290402 CDS YP_001307780.1 150015526 5291868 762108..762746 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cno:NT01CX_0185 ABC transporter permease; binding-protein-dependent transport system inner membrane protein 762746 5291868 Cbei_0637 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001307780.1 762108 D 290402 CDS YP_001307781.1 150015527 5291869 762758..763588 1 NC_009617.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: cno:NT01CX_0184 lipoprotein, attached to the cytoplasmic membrane, NlpA family; YaeC family lipoprotein 763588 5291869 Cbei_0638 Clostridium beijerinckii NCIMB 8052 YaeC family lipoprotein YP_001307781.1 762758 D 290402 CDS YP_001307782.1 150015528 5291870 763901..764863 1 NC_009617.1 PFAM: protein of unknown function DUF1232; KEGG: cpr:CPR_1437 hypothetical protein; hypothetical protein 764863 5291870 Cbei_0639 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307782.1 763901 D 290402 CDS YP_001307783.1 150015529 5291871 764965..765915 1 NC_009617.1 KEGG: cno:NT01CX_1570 ribonuclease HI; hypothetical protein 765915 5291871 Cbei_0640 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307783.1 764965 D 290402 CDS YP_001307784.1 150015530 5291872 766137..766310 1 NC_009617.1 hypothetical protein 766310 5291872 Cbei_0641 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307784.1 766137 D 290402 CDS YP_001307785.1 150015531 5291873 766564..767874 1 NC_009617.1 PFAM: helix-turn-helix domain protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: cpr:CPR_1434 helix-turn-helix domain protein; XRE family transcriptional regulator 767874 5291873 Cbei_0642 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001307785.1 766564 D 290402 CDS YP_001307786.1 150015532 5291874 767892..769157 1 NC_009617.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: ctc:CTC00534 ferrous iron transport protein B homolog; hypothetical protein 769157 5291874 Cbei_0643 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307786.1 767892 D 290402 CDS YP_001307787.1 150015533 5291875 complement(769315..769701) 1 NC_009617.1 PFAM: CBS domain containing protein; KEGG: dsy:DSY1459 hypothetical protein; hypothetical protein 769701 5291875 Cbei_0644 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307787.1 769315 R 290402 CDS YP_001307788.1 150015534 5291876 769968..772559 1 NC_009617.1 PFAM: ATPase AAA, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: ATPase AAA; KEGG: cno:NT01CX_2301 ClpB protein; ATPase 772559 5291876 Cbei_0645 Clostridium beijerinckii NCIMB 8052 ATPase YP_001307788.1 769968 D 290402 CDS YP_001307789.1 150015535 5291877 complement(772829..773425) 1 NC_009617.1 KEGG: cpe:CPE1421 hypothetical protein; hypothetical protein 773425 5291877 Cbei_0646 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307789.1 772829 R 290402 CDS YP_001307790.1 150015536 5291878 774050..774853 1 NC_009617.1 catalyzes the adenylation of ThiS which is involved in the formation of 5-methyl-4-(beta-hydroxyethyl)thiazole phosphate; thiamine biosynthesis protein ThiF 774853 5291878 Cbei_0647 Clostridium beijerinckii NCIMB 8052 thiamine biosynthesis protein ThiF YP_001307790.1 774050 D 290402 CDS YP_001307791.1 150015537 5291879 774861..775511 1 NC_009617.1 PFAM: thiamine monophosphate synthase; KEGG: cno:NT01CX_1504 thiamine-phosphate pyrophosphorylase; thiamine monophosphate synthase 775511 5291879 Cbei_0648 Clostridium beijerinckii NCIMB 8052 thiamine monophosphate synthase YP_001307791.1 774861 D 290402 CDS YP_001307792.1 150015538 5291880 775695..776561 1 NC_009617.1 PFAM: PP-loop domain protein; KEGG: cpr:CPR_1477 PP-loop family protein; PP-loop domain-containing protein 776561 5291880 Cbei_0649 Clostridium beijerinckii NCIMB 8052 PP-loop domain-containing protein YP_001307792.1 775695 D 290402 CDS YP_001307793.1 150015539 5291881 776651..776842 1 NC_009617.1 KEGG: cno:NT01CX_1350 hypothetical protein; hypothetical protein 776842 5291881 Cbei_0650 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307793.1 776651 D 290402 CDS YP_001307794.1 150015540 5291882 777035..778780 1 NC_009617.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: cno:NT01CX_2347 diguanylate cyclase/phosphodiesterase domain 2; diguanylate cyclase/phosphodiesterase 778780 5291882 Cbei_0651 Clostridium beijerinckii NCIMB 8052 diguanylate cyclase/phosphodiesterase YP_001307794.1 777035 D 290402 CDS YP_001307795.1 150015541 5291883 779236..779754 1 NC_009617.1 KEGG: cpf:CPF_1504 tryptophan transport protein; tryptophan transport protein 779754 5291883 Cbei_0652 Clostridium beijerinckii NCIMB 8052 tryptophan transport protein YP_001307795.1 779236 D 290402 CDS YP_001307796.1 150015542 5291884 complement(779827..780543) 1 NC_009617.1 PFAM: polysaccharide deacetylase; KEGG: cpe:CPE1477 probable endo-1,4-beta-xylanase; polysaccharide deacetylase 780543 5291884 Cbei_0653 Clostridium beijerinckii NCIMB 8052 polysaccharide deacetylase YP_001307796.1 779827 R 290402 CDS YP_001307797.1 150015543 5291885 780721..786075 1 NC_009617.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: cno:NT01CX_0237 GGDEF domain protein; diguanylate cyclase 786075 5291885 Cbei_0654 Clostridium beijerinckii NCIMB 8052 diguanylate cyclase YP_001307797.1 780721 D 290402 CDS YP_001307798.1 150015544 5291886 786173..786679 1 NC_009617.1 PFAM: Cna B domain protein; KEGG: cpf:CPF_1723 hypothetical protein; CnaB domain-containing protein 786679 5291886 Cbei_0655 Clostridium beijerinckii NCIMB 8052 CnaB domain-containing protein YP_001307798.1 786173 D 290402 CDS YP_001307799.1 150015545 5291887 786859..787299 1 NC_009617.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; KEGG: cno:NT01CX_0028 deoxyuridine 5triphosphate nucleotidohydrolase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 787299 5291887 Cbei_0656 Clostridium beijerinckii NCIMB 8052 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut YP_001307799.1 786859 D 290402 CDS YP_001307800.1 150015546 5291888 complement(787339..787899) 1 NC_009617.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mgm:Mmc1_1056 methyltransferase type 11; type 11 methyltransferase 787899 5291888 Cbei_0657 Clostridium beijerinckii NCIMB 8052 type 11 methyltransferase YP_001307800.1 787339 R 290402 CDS YP_001307801.1 150015547 5291889 788485..789042 1 NC_009617.1 PFAM: Accessory gene regulator B; KEGG: cpf:CPF_0865 AgrB family protein; accessory gene regulator B 789042 5291889 Cbei_0658 Clostridium beijerinckii NCIMB 8052 accessory gene regulator B YP_001307801.1 788485 D 290402 CDS YP_001307802.1 150015548 5291890 789261..790523 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: cpf:CPF_0863 sensor histidine kinase; signal transduction histidine kinase regulating citrate/malate metabolism 790523 5291890 Cbei_0659 Clostridium beijerinckii NCIMB 8052 signal transduction histidine kinase regulating citrate/malate metabolism YP_001307802.1 789261 D 290402 CDS YP_001307803.1 150015549 5291891 790809..791366 1 NC_009617.1 PFAM: Accessory gene regulator B; KEGG: cpf:CPF_0865 AgrB family protein; accessory gene regulator B 791366 5291891 Cbei_0660 Clostridium beijerinckii NCIMB 8052 accessory gene regulator B YP_001307803.1 790809 D 290402 CDS YP_001307804.1 150015550 5291892 791870..792760 1 NC_009617.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: cpf:CPF_1464 oxidoreductase, NAD-binding; ferredoxin-NADP(+) reductase subunit alpha 792760 5291892 Cbei_0661 Clostridium beijerinckii NCIMB 8052 ferredoxin-NADP(+) reductase subunit alpha YP_001307804.1 791870 D 290402 CDS YP_001307805.1 150015551 5291893 792760..794154 1 NC_009617.1 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase 794154 5291893 Cbei_0662 Clostridium beijerinckii NCIMB 8052 oxidoreductase YP_001307805.1 792760 D 290402 CDS YP_001307806.1 150015552 5291894 794524..795243 1 NC_009617.1 PFAM: protein of unknown function DUF161; KEGG: cpf:CPF_1372 hypothetical protein; hypothetical protein 795243 5291894 Cbei_0663 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307806.1 794524 D 290402 CDS YP_001307807.1 150015553 5291895 complement(795406..797406) 1 NC_009617.1 PFAM: alpha amylase, catalytic region; SMART: alpha amylase, C-terminal all-beta; alpha amylase, catalytic sub domain; KEGG: cac:CA_P0168 alpha-amylase; alpha amylase 797406 5291895 Cbei_0664 Clostridium beijerinckii NCIMB 8052 alpha amylase YP_001307807.1 795406 R 290402 CDS YP_001307808.1 150015554 5291896 798073..799788 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC1387 membrane associated chemotaxis sensory transducer protein (MSP domain and HamP domain); methyl-accepting chemotaxis sensory transducer 799788 5291896 Cbei_0665 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001307808.1 798073 D 290402 CDS YP_001307809.1 150015555 5291897 800214..800609 1 NC_009617.1 KEGG: aba:Acid345_2515 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor, serine/threonine protein kinase 800609 5291897 Cbei_0666 Clostridium beijerinckii NCIMB 8052 anti-sigma regulatory factor, serine/threonine protein kinase YP_001307809.1 800214 D 290402 CDS YP_001307810.1 150015556 5291898 800671..802671 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY2131 hypothetical protein; methyl-accepting chemotaxis sensory transducer 802671 5291898 Cbei_0667 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001307810.1 800671 D 290402 CDS YP_001307811.1 150015557 5291899 802683..802955 1 NC_009617.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dsy:DSY3263 hypothetical protein; anti-sigma-factor antagonist 802955 5291899 Cbei_0668 Clostridium beijerinckii NCIMB 8052 anti-sigma-factor antagonist YP_001307811.1 802683 D 290402 CDS YP_001307812.1 150015558 5291900 803010..804833 1 NC_009617.1 TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; protein phosphatase 2C domain protein; KEGG: mhu:Mhun_0004 multi-sensor signal transduction histidine kinase; PAS/PAC sensor protein 804833 5291900 Cbei_0669 Clostridium beijerinckii NCIMB 8052 PAS/PAC sensor protein YP_001307812.1 803010 D 290402 CDS YP_001307813.1 150015559 5296325 805611..806606 1 NC_009617.1 KEGG: eca:ECA4448 hypothetical protein; hypothetical protein 806606 5296325 Cbei_0670 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307813.1 805611 D 290402 CDS YP_001307814.1 150015560 5291902 806718..807176 1 NC_009617.1 KEGG: tte:TTE2433 hypothetical protein; hypothetical protein 807176 5291902 Cbei_0671 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307814.1 806718 D 290402 CDS YP_001307815.1 150015561 5291903 807402..808622 1 NC_009617.1 PFAM: transposase, mutator type; KEGG: swo:Swol_0155 hypothetical protein; transposase, mutator type 808622 5291903 Cbei_0672 Clostridium beijerinckii NCIMB 8052 transposase, mutator type YP_001307815.1 807402 D 290402 CDS YP_001307816.1 150015562 5296326 complement(809197..810663) 1 NC_009617.1 KEGG: oih:OB2869 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; NAD-dependent aldehyde dehydrogenase-like protein 810663 5296326 Cbei_0674 Clostridium beijerinckii NCIMB 8052 NAD-dependent aldehyde dehydrogenase-like protein YP_001307816.1 809197 R 290402 CDS YP_001307817.1 150015563 5291905 complement(810761..811948) 1 NC_009617.1 KEGG: gsu:GSU1737 phenylacetate-CoA ligase; coenzyme F390 synthetase-like protein 811948 5291905 Cbei_0675 Clostridium beijerinckii NCIMB 8052 coenzyme F390 synthetase-like protein YP_001307817.1 810761 R 290402 CDS YP_001307818.1 150015564 5291906 812698..813087 1 NC_009617.1 KEGG: mbu:Mbur_2297 transposase; transposase 813087 5291906 Cbei_0676 Clostridium beijerinckii NCIMB 8052 transposase YP_001307818.1 812698 D 290402 CDS YP_001307819.1 150015565 5291907 813953..815407 1 NC_009617.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC1452 MDR-type permease; EmrB/QacA family drug resistance transporter 815407 5291907 Cbei_0677 Clostridium beijerinckii NCIMB 8052 EmrB/QacA family drug resistance transporter YP_001307819.1 813953 D 290402 CDS YP_001307820.1 150015566 5291908 complement(815877..816734) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: cac:CAC1451 AraC-type DNA-binding domain-containing protein; AraC family transcriptional regulator 816734 5291908 Cbei_0678 Clostridium beijerinckii NCIMB 8052 AraC family transcriptional regulator YP_001307820.1 815877 R 290402 CDS YP_001307821.1 150015567 5291909 816988..818544 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_0136 ABC transporter ATP-binding protein; ABC transporter 818544 5291909 Cbei_0679 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001307821.1 816988 D 290402 CDS YP_001307822.1 150015568 5291910 819171..819800 1 NC_009617.1 PFAM: O-methyltransferase, family 3; KEGG: cno:NT01CX_2271 O-methyltransferase family; O-methyltransferase family protein 819800 5291910 Cbei_0680 Clostridium beijerinckii NCIMB 8052 O-methyltransferase family protein YP_001307822.1 819171 D 290402 CDS YP_001307823.1 150015569 5291911 820473..821222 1 NC_009617.1 PFAM: Thioesterase; KEGG: bcz:BCZK1713 thioesterase; thioesterase 821222 5291911 Cbei_0681 Clostridium beijerinckii NCIMB 8052 thioesterase YP_001307823.1 820473 D 290402 CDS YP_001307824.1 150015570 5291912 821573..821830 1 NC_009617.1 hypothetical protein 821830 5291912 Cbei_0682 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307824.1 821573 D 290402 CDS YP_001307825.1 150015571 5291913 821927..823237 1 NC_009617.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bas:BUsg532 hypothetical 42.6 kD protein in gshB-ansB; radical SAM domain-containing protein 823237 5291913 Cbei_0683 Clostridium beijerinckii NCIMB 8052 radical SAM domain-containing protein YP_001307825.1 821927 D 290402 CDS YP_001307826.1 150015572 5291914 823312..824625 1 NC_009617.1 PFAM: AMP-dependent synthetase and ligase; KEGG: hch:HCH_06164 acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; AMP-dependent synthetase and ligase 824625 5291914 Cbei_0684 Clostridium beijerinckii NCIMB 8052 AMP-dependent synthetase and ligase YP_001307826.1 823312 D 290402 CDS YP_001307827.1 150015573 5291915 824806..825927 1 NC_009617.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: tpe:Tpen_0821 alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 825927 5291915 Cbei_0685 Clostridium beijerinckii NCIMB 8052 alcohol dehydrogenase YP_001307827.1 824806 D 290402 CDS YP_001307828.1 150015574 5291916 826026..827726 1 NC_009617.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sdn:Sden_3532 amino acid adenylation; AMP-dependent synthetase and ligase 827726 5291916 Cbei_0686 Clostridium beijerinckii NCIMB 8052 AMP-dependent synthetase and ligase YP_001307828.1 826026 D 290402 CDS YP_001307829.1 150015575 5291917 827757..828488 1 NC_009617.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: rpc:RPC_3373 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 828488 5291917 Cbei_0687 Clostridium beijerinckii NCIMB 8052 4'-phosphopantetheinyl transferase YP_001307829.1 827757 D 290402 CDS YP_001307830.1 150015576 5291918 828508..829182 1 NC_009617.1 PFAM: beta-lactamase domain protein; KEGG: bsu:BG12648 involved in polyketide synthesis; beta-lactamase domain-containing protein 829182 5291918 Cbei_0688 Clostridium beijerinckii NCIMB 8052 beta-lactamase domain-containing protein YP_001307830.1 828508 D 290402 CDS YP_001307831.1 150015577 5291919 829295..829600 1 NC_009617.1 hypothetical protein 829600 5291919 Cbei_0689 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307831.1 829295 D 290402 CDS YP_001307832.1 150015578 5291920 829832..830812 1 NC_009617.1 PFAM: Radical SAM domain protein; KEGG: pai:PAE1082 hypothetical protein; radical SAM domain-containing protein 830812 5291920 Cbei_0690 Clostridium beijerinckii NCIMB 8052 radical SAM domain-containing protein YP_001307832.1 829832 D 290402 CDS YP_001307833.1 150015579 5291921 831345..832103 1 NC_009617.1 PFAM: acyl-ACP thioesterase; KEGG: ctc:CTC00119 acyl-acyl carrier protein thioesterase; acyl-ACP thioesterase 832103 5291921 Cbei_0691 Clostridium beijerinckii NCIMB 8052 acyl-ACP thioesterase YP_001307833.1 831345 D 290402 CDS YP_001307834.1 150015580 5291922 832744..833772 1 NC_009617.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 833772 5291922 Cbei_0692 Clostridium beijerinckii NCIMB 8052 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001307834.1 832744 D 290402 CDS YP_001307835.1 150015581 5296327 complement(834710..835891) 1 NC_009617.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; KEGG: mbu:Mbur_2004 RNA-directed DNA polymerase; RNA-directed DNA polymerase 835891 5296327 Cbei_0694 Clostridium beijerinckii NCIMB 8052 RNA-directed DNA polymerase YP_001307835.1 834710 R 290402 CDS YP_001307836.1 150015582 5296328 838318..838839 1 NC_009617.1 PFAM: guanine-specific ribonuclease N1 and T1; KEGG: cac:CAC0843 ribonuclease precursor (barnase), secreted; guanine-specific ribonuclease N1 and T1 838839 5296328 Cbei_0696 Clostridium beijerinckii NCIMB 8052 guanine-specific ribonuclease N1 and T1 YP_001307836.1 838318 D 290402 CDS YP_001307837.1 150015583 5291925 838861..839145 1 NC_009617.1 PFAM: Barstar (barnase inhibitor); KEGG: cac:CAC0844 barstar-like protein ribonuclease (barnase) inhibitor; barstar (barnase inhibitor) 839145 5291925 Cbei_0697 Clostridium beijerinckii NCIMB 8052 barstar (barnase inhibitor) YP_001307837.1 838861 D 290402 CDS YP_001307838.1 150015584 5291926 839233..839976 1 NC_009617.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: cpr:CPR_2604 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 839976 5291926 Cbei_0698 Clostridium beijerinckii NCIMB 8052 RpiR family transcriptional regulator YP_001307838.1 839233 D 290402 CDS YP_001307839.1 150015585 5291927 840290..841717 1 NC_009617.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system cellobiose/arbutin/salicin-specific transporter subunit IIBC 841717 5291927 Cbei_0699 Clostridium beijerinckii NCIMB 8052 PTS system cellobiose/arbutin/salicin-specific transporter subunit IIBC YP_001307839.1 840290 D 290402 CDS YP_001307840.1 150015586 5291928 841710..843134 1 NC_009617.1 PFAM: glycoside hydrolase, family 1; KEGG: eca:ECA2166 6-phospho-beta-glucosidase; cryptic 6-phospho-beta-glucosidase 843134 5291928 Cbei_0700 Clostridium beijerinckii NCIMB 8052 cryptic 6-phospho-beta-glucosidase YP_001307840.1 841710 D 290402 CDS YP_001307841.1 150015587 5291929 complement(843360..844262) 1 NC_009617.1 TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Radical SAM domain protein; KEGG: spd:SPD_0229 glycyl-radical enzyme activating protein family protein; glycyl-radical activating family protein 844262 5291929 Cbei_0701 Clostridium beijerinckii NCIMB 8052 glycyl-radical activating family protein YP_001307841.1 843360 R 290402 CDS YP_001307842.1 150015588 5291930 844586..845338 1 NC_009617.1 PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: ssa:SSA_0278 transcriptional repressor of sugar metabolism, GlpR/DeoR family; DeoR family transcriptional regulator 845338 5291930 Cbei_0702 Clostridium beijerinckii NCIMB 8052 DeoR family transcriptional regulator YP_001307842.1 844586 D 290402 CDS YP_001307843.1 150015589 5291931 complement(845717..846196) 1 NC_009617.1 KEGG: lme:LEUM_0362 hypothetical protein; hypothetical protein 846196 5291931 Cbei_0703 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307843.1 845717 R 290402 CDS YP_001307844.1 150015590 5291932 complement(846193..846402) 1 NC_009617.1 PFAM: helix-turn-helix domain protein; KEGG: ssa:SSA_2393 transcriptional regulator, XRE family; XRE family transcriptional regulator 846402 5291932 Cbei_0704 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001307844.1 846193 R 290402 CDS YP_001307845.1 150015591 5291933 846785..849190 1 NC_009617.1 TIGRFAM: pyruvate formate-lyase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL; KEGG: lpl:lp_2598 formate C-acetyltransferase; pyruvate formate-lyase 849190 5291933 Cbei_0705 Clostridium beijerinckii NCIMB 8052 pyruvate formate-lyase YP_001307845.1 846785 D 290402 CDS YP_001307846.1 150015592 5291934 complement(849348..849791) 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: cac:CAC3669 transcriptional regulator, MarR/EmrR family; MarR family transcriptional regulator 849791 5291934 Cbei_0706 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001307846.1 849348 R 290402 CDS YP_001307847.1 150015593 5291935 complement(850178..851356) 1 NC_009617.1 PFAM: major facilitator superfamily MFS_1; KEGG: oih:OB3076 antibiotic resistance protein; major facilitator superfamily transporter 851356 5291935 Cbei_0707 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001307847.1 850178 R 290402 CDS YP_001307848.1 150015594 5291936 851766..852398 1 NC_009617.1 PFAM: cobalamin B12-binding domain protein; KEGG: mbu:Mbur_0956 cobalamin B12-binding protein; cobalamin B12-binding domain-containing protein 852398 5291936 Cbei_0708 Clostridium beijerinckii NCIMB 8052 cobalamin B12-binding domain-containing protein YP_001307848.1 851766 D 290402 CDS YP_001307849.1 150015595 5291937 852398..853441 1 NC_009617.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); KEGG: mbu:Mbur_0957 uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 853441 5291937 Cbei_0709 Clostridium beijerinckii NCIMB 8052 uroporphyrinogen decarboxylase YP_001307849.1 852398 D 290402 CDS YP_001307850.1 150015596 5291938 853446..855791 1 NC_009617.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cth:Cthe_0806 PAS/PAC sensor hybrid histidine kinase; histidine kinase 855791 5291938 Cbei_0710 Clostridium beijerinckii NCIMB 8052 histidine kinase YP_001307850.1 853446 D 290402 CDS YP_001307851.1 150015597 5291939 856709..857686 1 NC_009617.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA subunit; PFAM: PTS system fructose subfamily IIA component; PTS system sorbose subfamily IIB component; KEGG: cac:CA_P0066 mannose-specific phosphotransferase system component IIAB; PTS system mannose/fructose/sorbose family transporter subunit IIA 857686 5291939 Cbei_0711 Clostridium beijerinckii NCIMB 8052 PTS system mannose/fructose/sorbose family transporter subunit IIA YP_001307851.1 856709 D 290402 CDS YP_001307852.1 150015598 5291940 857722..858528 1 NC_009617.1 PFAM: phosphotransferase system PTS, sorbose-specific IIC subunit; KEGG: cac:CA_P0067 mannose/fructose-specific phosphotransferase system component IIC; PTS system sorbose-specific transporter subunit IIC 858528 5291940 Cbei_0712 Clostridium beijerinckii NCIMB 8052 PTS system sorbose-specific transporter subunit IIC YP_001307852.1 857722 D 290402 CDS YP_001307853.1 150015599 5291941 858548..859459 1 NC_009617.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: cac:CA_P0068 mannose-specific phosphotransferase system component IID; PTS system mannose/fructose/sorbose family transporter subunit IID 859459 5291941 Cbei_0713 Clostridium beijerinckii NCIMB 8052 PTS system mannose/fructose/sorbose family transporter subunit IID YP_001307853.1 858548 D 290402 CDS YP_001307854.1 150015600 5291942 859544..859990 1 NC_009617.1 PFAM: protein of unknown function DUF956; KEGG: cac:CA_P0069 uncharacterized protein, homolog of Streptococcus salivarius (5669858); hypothetical protein 859990 5291942 Cbei_0714 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307854.1 859544 D 290402 CDS YP_001307855.1 150015601 5291943 complement(860201..860992) 1 NC_009617.1 PFAM: nitroreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cac:CAC3483 nitroreductase fused to ferredoxin domain; nitroreductase 860992 5291943 Cbei_0715 Clostridium beijerinckii NCIMB 8052 nitroreductase YP_001307855.1 860201 R 290402 CDS YP_001307856.1 150015602 5291944 complement(861271..862512) 1 NC_009617.1 PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC0560 integral membrane protein similar to antibiotic resistance protein B.subtilis; major facilitator superfamily transporter 862512 5291944 Cbei_0716 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001307856.1 861271 R 290402 CDS YP_001307857.1 150015603 5291945 862735..863553 1 NC_009617.1 SMART: helix-turn-helix domain protein; KEGG: rle:RL4049 hypothetical protein; XRE family transcriptional regulator 863553 5291945 Cbei_0717 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001307857.1 862735 D 290402 CDS YP_001307858.1 150015604 5291946 863765..864652 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; regulatory protein, MarR; KEGG: bca:BCE_A0172 transcriptional regulator, MarR family protein; MarR family transcriptional regulator 864652 5291946 Cbei_0718 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001307858.1 863765 D 290402 CDS YP_001307859.1 150015605 5291947 complement(864784..865602) 1 NC_009617.1 PFAM: Integrase, catalytic region; KEGG: sar:SAR2307 transposase; integrase catalytic subunit 865602 5291947 Cbei_0719 Clostridium beijerinckii NCIMB 8052 integrase catalytic subunit YP_001307859.1 864784 R 290402 CDS YP_001307860.1 150015606 5291948 complement(865671..866351) 1 NC_009617.1 KEGG: cpr:CPR_2608 hypothetical protein; hypothetical protein 866351 5291948 Cbei_0720 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307860.1 865671 R 290402 CDS YP_001307861.1 150015607 5291949 866577..867359 1 NC_009617.1 TIGRFAM: phage replisome organizer, KEGG: sao:SAOUHSC_02069 phi PV83 orf 20-like protein; phage replisome organizer 867359 5291949 Cbei_0721 Clostridium beijerinckii NCIMB 8052 phage replisome organizer YP_001307861.1 866577 D 290402 CDS YP_001307862.1 150015608 5291950 complement(867466..868338) 1 NC_009617.1 PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: bsu:BG14032 similar to transcriptional regulator (LysR family); LysR family transcriptional regulator 868338 5291950 Cbei_0722 Clostridium beijerinckii NCIMB 8052 LysR family transcriptional regulator YP_001307862.1 867466 R 290402 CDS YP_001307863.1 150015609 5291951 868523..869974 1 NC_009617.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: chy:CHY_0588 drug resistance transporter EmrB/QacA family protein; EmrB/QacA family drug resistance transporter 869974 5291951 Cbei_0723 Clostridium beijerinckii NCIMB 8052 EmrB/QacA family drug resistance transporter YP_001307863.1 868523 D 290402 CDS YP_001307864.1 150015610 5291952 complement(870225..871526) 1 NC_009617.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: dsy:DSY3551 hypothetical protein; transposase IS116/IS110/IS902 family protein 871526 5291952 Cbei_0724 Clostridium beijerinckii NCIMB 8052 transposase IS116/IS110/IS902 family protein YP_001307864.1 870225 R 290402 CDS YP_001307865.1 150015611 5291953 871946..872530 1 NC_009617.1 PFAM: nitroreductase; KEGG: bth:BT_1148 NADH dehydrogenase/NAD(P)H nitroreductase; nitroreductase 872530 5291953 Cbei_0725 Clostridium beijerinckii NCIMB 8052 nitroreductase YP_001307865.1 871946 D 290402 CDS YP_001307866.1 150015612 5291954 complement(872647..873051) 1 NC_009617.1 PFAM: regulatory protein, MerR; KEGG: lbr:LVIS_2182 predicted transcriptional regulator; MerR family transcriptional regulator 873051 5291954 Cbei_0726 Clostridium beijerinckii NCIMB 8052 MerR family transcriptional regulator YP_001307866.1 872647 R 290402 CDS YP_001307867.1 150015613 5291955 873148..874602 1 NC_009617.1 PFAM: aldehyde dehydrogenase; KEGG: reu:Reut_A1903 aldehyde dehydrogenase; aldehyde dehydrogenase 874602 5291955 Cbei_0727 Clostridium beijerinckii NCIMB 8052 aldehyde dehydrogenase YP_001307867.1 873148 D 290402 CDS YP_001307868.1 150015614 5291956 874717..875493 1 NC_009617.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cno:NT01CX_1999 SAM-dependent methyltransferase; type 11 methyltransferase 875493 5291956 Cbei_0728 Clostridium beijerinckii NCIMB 8052 type 11 methyltransferase YP_001307868.1 874717 D 290402 CDS YP_001307869.1 150015615 5291957 875799..877280 1 NC_009617.1 PFAM: aldehyde dehydrogenase; KEGG: fnu:FN0454 aldehyde dehydrogenase B; aldehyde dehydrogenase 877280 5291957 Cbei_0729 Clostridium beijerinckii NCIMB 8052 aldehyde dehydrogenase YP_001307869.1 875799 D 290402 CDS YP_001307870.1 150015616 5291958 complement(877468..878910) 1 NC_009617.1 KEGG: cac:CAC0729 hypothetical protein; hypothetical protein 878910 5291958 Cbei_0730 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307870.1 877468 R 290402 CDS YP_001307871.1 150015617 5291959 879364..880389 1 NC_009617.1 PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: hch:HCH_06458 transcriptional regulator; alanine racemase 880389 5291959 Cbei_0731 Clostridium beijerinckii NCIMB 8052 alanine racemase YP_001307871.1 879364 D 290402 CDS YP_001307872.1 150015618 5291960 880767..882017 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 1; KEGG: bcl:ABC3496 sugar ABC transporter substrate-binding protein; extracellular solute-binding protein 882017 5291960 Cbei_0732 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001307872.1 880767 D 290402 CDS YP_001307873.1 150015619 5291961 882191..883054 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ooe:OEOE_0810 ABC-type sugar transport system, permease component; sugar ABC transporter permease 883054 5291961 Cbei_0733 Clostridium beijerinckii NCIMB 8052 sugar ABC transporter permease YP_001307873.1 882191 D 290402 CDS YP_001307874.1 150015620 5291962 883051..883875 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3498 sugar ABC transporter permease; sugar ABC transporter permease 883875 5291962 Cbei_0734 Clostridium beijerinckii NCIMB 8052 sugar ABC transporter permease YP_001307874.1 883051 D 290402 CDS YP_001307875.1 150015621 5291963 883929..885569 1 NC_009617.1 PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: bcz:BCZK3772 oligo-1,6-glucosidase; alpha amylase 885569 5291963 Cbei_0735 Clostridium beijerinckii NCIMB 8052 alpha amylase YP_001307875.1 883929 D 290402 CDS YP_001307876.1 150015622 5291964 886113..887453 1 NC_009617.1 hypothetical protein 887453 5291964 Cbei_0736 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307876.1 886113 D 290402 CDS YP_001307877.1 150015623 5291965 887553..888587 1 NC_009617.1 PFAM: peptidase U32; KEGG: dsy:DSY0725 hypothetical protein; peptidase U32 888587 5291965 Cbei_0737 Clostridium beijerinckii NCIMB 8052 peptidase U32 YP_001307877.1 887553 D 290402 CDS YP_001307878.1 150015624 5291966 complement(888829..890046) 1 NC_009617.1 PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC3482 predicted permease; major facilitator superfamily transporter 890046 5291966 Cbei_0738 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001307878.1 888829 R 290402 CDS YP_001307879.1 150015625 5291967 complement(890171..890806) 1 NC_009617.1 PFAM: NADPH-dependent FMN reductase; KEGG: gsu:GSU0179 NADPH-dependent FMN reductase domain protein; NADPH-dependent FMN reductase 890806 5291967 Cbei_0739 Clostridium beijerinckii NCIMB 8052 NADPH-dependent FMN reductase YP_001307879.1 890171 R 290402 CDS YP_001307880.1 150015626 5291968 891195..891773 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: cac:CAC3481 transcriptional regulator, AcrR family; TetR family transcriptional regulator 891773 5291968 Cbei_0740 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001307880.1 891195 D 290402 CDS YP_001307881.1 150015627 5291969 892285..892794 1 NC_009617.1 PFAM: protein of unknown function DUF988; KEGG: cpr:CPR_1478 hypothetical protein; hypothetical protein 892794 5291969 Cbei_0741 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307881.1 892285 D 290402 CDS YP_001307882.1 150015628 5291970 893159..894373 1 NC_009617.1 KEGG: cac:CAC0739 predicted membrane protein; membrane protein 894373 5291970 Cbei_0742 Clostridium beijerinckii NCIMB 8052 membrane protein YP_001307882.1 893159 D 290402 CDS YP_001307883.1 150015629 5291971 894664..895797 1 NC_009617.1 KEGG: cpr:CPR_1272 FliB family protein; FliB family protein 895797 5291971 Cbei_0743 Clostridium beijerinckii NCIMB 8052 FliB family protein YP_001307883.1 894664 D 290402 CDS YP_001307884.1 150015630 5291972 896133..898568 1 NC_009617.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: pin:Ping_1200 diguanylate cyclase with PAS/PAC sensor; PAS/PAC sensor-containing diguanylate cyclase 898568 5291972 Cbei_0744 Clostridium beijerinckii NCIMB 8052 PAS/PAC sensor-containing diguanylate cyclase YP_001307884.1 896133 D 290402 CDS YP_001307885.1 150015631 5291973 898983..900563 1 NC_009617.1 KEGG: cpf:CPF_0234 hypothetical protein; hypothetical protein 900563 5291973 Cbei_0745 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307885.1 898983 D 290402 CDS YP_001307886.1 150015632 5291974 complement(900989..902290) 1 NC_009617.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: dsy:DSY3551 hypothetical protein; transposase IS116/IS110/IS902 family protein 902290 5291974 Cbei_0746 Clostridium beijerinckii NCIMB 8052 transposase IS116/IS110/IS902 family protein YP_001307886.1 900989 R 290402 CDS YP_001307887.1 150015633 5291975 902709..904403 1 NC_009617.1 PFAM: glycosyl hydrolase, BNR repeat-containing protein; KEGG: cac:CAC3457 predicted membrane protein; BNR repeat-containing glycosyl hydrolase 904403 5291975 Cbei_0747 Clostridium beijerinckii NCIMB 8052 BNR repeat-containing glycosyl hydrolase YP_001307887.1 902709 D 290402 CDS YP_001307888.1 150015634 5291976 complement(904649..905353) 1 NC_009617.1 TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: sar:SAR0140 deoxyribose-phosphate aldolase; deoxyribose-phosphate aldolase 905353 5291976 Cbei_0748 Clostridium beijerinckii NCIMB 8052 deoxyribose-phosphate aldolase YP_001307888.1 904649 R 290402 CDS YP_001307889.1 150015635 5291977 905613..906497 1 NC_009617.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: tte:TTE2419 transcriptional regulator; RpiR family transcriptional regulator 906497 5291977 Cbei_0749 Clostridium beijerinckii NCIMB 8052 RpiR family transcriptional regulator YP_001307889.1 905613 D 290402 CDS YP_001307890.1 150015636 5291978 complement(906685..907149) 1 NC_009617.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: cpr:CPR_1270 transcription elongation factor GreA; GreA/GreB family elongation factor 907149 5291978 Cbei_0750 Clostridium beijerinckii NCIMB 8052 GreA/GreB family elongation factor YP_001307890.1 906685 R 290402 CDS YP_001307891.1 150015637 5291979 907455..909593 1 NC_009617.1 TIGRFAM: PTS system, glucose subfamily, IIA subunit; PTS system, glucose-like IIB subunint; PFAM: sugar-specific permease, EIIA 1 domain; phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: gka:GK0991 PTS system, glucose-specific enzyme II, A component; PTS system glucose subfamily transporter subunit IIA 909593 5291979 Cbei_0751 Clostridium beijerinckii NCIMB 8052 PTS system glucose subfamily transporter subunit IIA YP_001307891.1 907455 D 290402 CDS YP_001307892.1 150015638 5291980 909619..910455 1 NC_009617.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: cac:CAC1355 transcriptional antiterminator (BglG family); transcriptional antiterminator BglG 910455 5291980 Cbei_0752 Clostridium beijerinckii NCIMB 8052 transcriptional antiterminator BglG YP_001307892.1 909619 D 290402 CDS YP_001307893.1 150015639 5291981 910856..912055 1 NC_009617.1 KEGG: mpe:MYPE1550 predicted cytoskeletal protein; hypothetical protein 912055 5291981 Cbei_0753 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307893.1 910856 D 290402 CDS YP_001307894.1 150015640 5291982 912083..913228 1 NC_009617.1 PFAM: toxic anion resistance family protein; KEGG: ser:SERP0976 tellurite resistance protein; toxic anion resistance family protein 913228 5291982 Cbei_0754 Clostridium beijerinckii NCIMB 8052 toxic anion resistance family protein YP_001307894.1 912083 D 290402 CDS YP_001307895.1 150015641 5291983 913563..914462 1 NC_009617.1 PFAM: response regulator receiver; CheW domain protein; KEGG: cno:NT01CX_2338 chemotaxis protein CheV-like protein; CheW protein 914462 5291983 Cbei_0755 Clostridium beijerinckii NCIMB 8052 CheW protein YP_001307895.1 913563 D 290402 CDS YP_001307896.1 150015642 5291984 914917..916248 1 NC_009617.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: cac:CAC0747 secreted protein containing uncharacterized conserved protein of ErfK family; ErfK/YbiS/YcfS/YnhG family protein 916248 5291984 Cbei_0756 Clostridium beijerinckii NCIMB 8052 ErfK/YbiS/YcfS/YnhG family protein YP_001307896.1 914917 D 290402 CDS YP_001307897.1 150015643 5291985 916542..917924 1 NC_009617.1 KEGG: cac:CAC0747 secreted protein containing uncharacterized conserved protein of ErfK family; ErfK family protein 917924 5291985 Cbei_0757 Clostridium beijerinckii NCIMB 8052 ErfK family protein YP_001307897.1 916542 D 290402 CDS YP_001307898.1 150015644 5291986 918242..918553 1 NC_009617.1 PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: spn:SP_0249 PTS system, IIB component; phosphotransferase system, lactose/cellobiose-specific IIB subunit 918553 5291986 Cbei_0758 Clostridium beijerinckii NCIMB 8052 phosphotransferase system, lactose/cellobiose-specific IIB subunit YP_001307898.1 918242 D 290402 CDS YP_001307899.1 150015645 5291987 918844..919989 1 NC_009617.1 PFAM: aminotransferase, class V; KEGG: cpf:CPF_0845 aminotransferase, class V; serine--pyruvate transaminase 919989 5291987 Cbei_0759 Clostridium beijerinckii NCIMB 8052 serine--pyruvate transaminase YP_001307899.1 918844 D 290402 CDS YP_001307900.1 150015646 5291988 920020..920553 1 NC_009617.1 KEGG: ctc:CTC01976 membrane spanning protein; membrane spanning protein 920553 5291988 Cbei_0760 Clostridium beijerinckii NCIMB 8052 membrane spanning protein YP_001307900.1 920020 D 290402 CDS YP_001307901.1 150015647 5291989 920740..921420 1 NC_009617.1 TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase; KEGG: cac:CAC1431 ribose 5-phosphate isomerase; ribose 5-phosphate isomerase 921420 5291989 Cbei_0761 Clostridium beijerinckii NCIMB 8052 ribose 5-phosphate isomerase YP_001307901.1 920740 D 290402 CDS YP_001307902.1 150015648 5291990 921468..922436 1 NC_009617.1 PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: cac:CAC3400 predicted dehydrogenase; oxidoreductase domain-containing protein 922436 5291990 Cbei_0762 Clostridium beijerinckii NCIMB 8052 oxidoreductase domain-containing protein YP_001307902.1 921468 D 290402 CDS YP_001307903.1 150015649 5291991 922467..923342 1 NC_009617.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: lsl:LSL_1438 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 923342 5291991 Cbei_0763 Clostridium beijerinckii NCIMB 8052 RpiR family transcriptional regulator YP_001307903.1 922467 D 290402 CDS YP_001307904.1 150015650 5291992 923428..924348 1 NC_009617.1 PFAM: aldo/keto reductase; KEGG: cac:CAC3378 aldo/keto reductase family enzyme; aldo/keto reductase 924348 5291992 Cbei_0764 Clostridium beijerinckii NCIMB 8052 aldo/keto reductase YP_001307904.1 923428 D 290402 CDS YP_001307905.1 150015651 5296332 complement(929991..930458) 1 NC_009617.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cac:CAC0327 bacterioferritin comigratory protein (AHPC/TSA family); alkyl hydroperoxide reductase 930458 5296332 Cbei_0765 Clostridium beijerinckii NCIMB 8052 alkyl hydroperoxide reductase YP_001307905.1 929991 R 290402 CDS YP_001307906.1 150015652 5291994 931004..932293 1 NC_009617.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bth:BT_2387 O-acetylhomoserine (thiol)-lyase; O-acetylhomoserine/O-acetylserine sulfhydrylase 932293 5291994 Cbei_0766 Clostridium beijerinckii NCIMB 8052 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_001307906.1 931004 D 290402 CDS YP_001307907.1 150015653 5291995 complement(932502..933272) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: spd:SPD_0574 DNA-binding response regulator; response regulator receiver protein 933272 5291995 Cbei_0767 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001307907.1 932502 R 290402 CDS YP_001307908.1 150015654 5291996 complement(933250..935127) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; histidine kinase internal region; KEGG: tte:TTE2344 predicted ATPase; histidine kinase internal region 935127 5291996 Cbei_0768 Clostridium beijerinckii NCIMB 8052 histidine kinase internal region YP_001307908.1 933250 R 290402 CDS YP_001307909.1 150015655 5291997 935299..936627 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 1; KEGG: bha:BH2226 multiple sugar transport system substrate-binding protein; extracellular solute-binding protein 936627 5291997 Cbei_0769 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001307909.1 935299 D 290402 CDS YP_001307910.1 150015656 5291998 936694..937572 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PC00038 probable sugar ABC transporter permease; binding-protein-dependent transport system inner membrane protein 937572 5291998 Cbei_0770 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001307910.1 936694 D 290402 CDS YP_001307911.1 150015657 5291999 937572..938399 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cno:NT01CX_0967 sugar ABC transporter permease; binding-protein-dependent transport system inner membrane protein 938399 5291999 Cbei_0771 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001307911.1 937572 D 290402 CDS YP_001307912.1 150015658 5292000 938529..940886 1 NC_009617.1 catalyzes the transfer of alpha-xylosyl residue from alpha-xyloside to xylose, glucose, mannose, fructose, maltose, isomaltose, nigerose, kojibiose, sucrose, and trehalose; shows higher activity against alpha-xylosyl fluoride, isoprimeverose (6-O-alpha-xylopyranosyl-glucopyranose), and alpha-xyloside in xyloglucan oligosaccharides; alpha-xylosidase 940886 5292000 Cbei_0772 Clostridium beijerinckii NCIMB 8052 alpha-xylosidase YP_001307912.1 938529 D 290402 CDS YP_001307913.1 150015659 5292001 941066..942841 1 NC_009617.1 TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; Oligopeptidase F; KEGG: tte:TTE2488 oligoendopeptidase F; pepF/M3 family oligoendopeptidase 942841 5292001 Cbei_0773 Clostridium beijerinckii NCIMB 8052 pepF/M3 family oligoendopeptidase YP_001307913.1 941066 D 290402 CDS YP_001307914.1 150015660 5292002 942930..943688 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cpr:CPR_2063 polyferredoxin; 4Fe-4S ferredoxin 943688 5292002 Cbei_0774 Clostridium beijerinckii NCIMB 8052 4Fe-4S ferredoxin YP_001307914.1 942930 D 290402 CDS YP_001307915.1 150015661 5292003 943797..944564 1 NC_009617.1 KEGG: fnu:FN0522 exonuclease SBCC; hypothetical protein 944564 5292003 Cbei_0775 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307915.1 943797 D 290402 CDS YP_001307916.1 150015662 5292004 944836..945144 1 NC_009617.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: ssp:SSP1650 thioredoxin; thioredoxin 945144 5292004 Cbei_0776 Clostridium beijerinckii NCIMB 8052 thioredoxin YP_001307916.1 944836 D 290402 CDS YP_001307917.1 150015663 5292005 945277..945756 1 NC_009617.1 PFAM: glutathione peroxidase; KEGG: llm:llmg_1088 Gpo protein; glutathione peroxidase 945756 5292005 Cbei_0777 Clostridium beijerinckii NCIMB 8052 glutathione peroxidase YP_001307917.1 945277 D 290402 CDS YP_001307918.1 150015664 5292006 945883..946749 1 NC_009617.1 PFAM: glucose-inhibited division protein A; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cpr:CPR_2349 thioredoxin reductase; thioredoxin-disulfide reductase 946749 5292006 Cbei_0778 Clostridium beijerinckii NCIMB 8052 thioredoxin-disulfide reductase YP_001307918.1 945883 D 290402 CDS YP_001307919.1 150015665 5292007 946924..947364 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: cpr:CPR_1032 transcriptional regulator, MarR family; MarR family transcriptional regulator 947364 5292007 Cbei_0779 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001307919.1 946924 D 290402 CDS YP_001307920.1 150015666 5292008 947419..948099 1 NC_009617.1 PFAM: cyclic nucleotide-binding; KEGG: cac:CAC0884 cAMP-binding domain (catabolite gene activator) and regulatory subunit of cAMP-dependent protein kinase; cyclic nucleotide-binding protein 948099 5292008 Cbei_0780 Clostridium beijerinckii NCIMB 8052 cyclic nucleotide-binding protein YP_001307920.1 947419 D 290402 CDS YP_001307921.1 150015667 5292009 948246..948938 1 NC_009617.1 PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: cac:CAC1511 FNR-like catabolite gene activator (c-AMP binding domain); Crp/Fnr family transcriptional regulator 948938 5292009 Cbei_0781 Clostridium beijerinckii NCIMB 8052 Crp/Fnr family transcriptional regulator YP_001307921.1 948246 D 290402 CDS YP_001307922.1 150015668 5292010 949019..949786 1 NC_009617.1 PFAM: formate/nitrite transporter; KEGG: cac:CAC1512 formate/nitrite family of transporter; formate/nitrite transporter 949786 5292010 Cbei_0782 Clostridium beijerinckii NCIMB 8052 formate/nitrite transporter YP_001307922.1 949019 D 290402 CDS YP_001307923.1 150015669 5292011 949799..950809 1 NC_009617.1 TIGRFAM: Sulfite reductase, Subunit A; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cpf:CPF_1693 sulfite reductase, iron-sulfur subunit; sulfite reductase subunit A 950809 5292011 Cbei_0783 Clostridium beijerinckii NCIMB 8052 sulfite reductase subunit A YP_001307923.1 949799 D 290402 CDS YP_001307924.1 150015670 5292012 950802..951596 1 NC_009617.1 with AsrAC catalyzes the reduction of sulfite to hydrogen sulfide; anaerobic sulfite reductase subunit B 951596 5292012 Cbei_0784 Clostridium beijerinckii NCIMB 8052 anaerobic sulfite reductase subunit B YP_001307924.1 950802 D 290402 CDS YP_001307925.1 150015671 5292013 951609..952574 1 NC_009617.1 TIGRFAM: Sulfite reductase, Subunit C; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: cpf:CPF_1691 anaerobic sulfite reductase, subunit C; sulfite reductase subunit C 952574 5292013 Cbei_0785 Clostridium beijerinckii NCIMB 8052 sulfite reductase subunit C YP_001307925.1 951609 D 290402 CDS YP_001307926.1 150015672 5292014 953476..955113 1 NC_009617.1 catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 955113 5292014 Cbei_0786 Clostridium beijerinckii NCIMB 8052 hydroxylamine reductase YP_001307926.1 953476 D 290402 CDS YP_001307927.1 150015673 5292015 955411..957249 1 NC_009617.1 PFAM: amino acid permease-associated region; KEGG: cac:CA_P0027 predicted amino acid permeases; amino acid permease-associated protein 957249 5292015 Cbei_0787 Clostridium beijerinckii NCIMB 8052 amino acid permease-associated protein YP_001307927.1 955411 D 290402 CDS YP_001307928.1 150015674 5292016 complement(957390..958814) 1 NC_009617.1 PFAM: amino acid permease-associated region; KEGG: cno:NT01CX_2354 lysine-specific permease; amino acid permease-associated protein 958814 5292016 Cbei_0788 Clostridium beijerinckii NCIMB 8052 amino acid permease-associated protein YP_001307928.1 957390 R 290402 CDS YP_001307929.1 150015675 5292017 complement(959397..960200) 1 NC_009617.1 KEGG: dsy:DSY1434 hypothetical protein; hypothetical protein 960200 5292017 Cbei_0789 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307929.1 959397 R 290402 CDS YP_001307930.1 150015676 5292018 complement(960194..960973) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY1433 hypothetical protein; ABC transporter 960973 5292018 Cbei_0790 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001307930.1 960194 R 290402 CDS YP_001307931.1 150015677 5292019 complement(960973..961341) 1 NC_009617.1 PFAM: GntR family transcriptional regulator; KEGG: dsy:DSY1432 hypothetical protein; GntR family transcriptional regulator 961341 5292019 Cbei_0791 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001307931.1 960973 R 290402 CDS YP_001307932.1 150015678 5292020 961559..962488 1 NC_009617.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 962488 5292020 Cbei_0792 Clostridium beijerinckii NCIMB 8052 quinolinate synthetase YP_001307932.1 961559 D 290402 CDS YP_001307933.1 150015679 5292021 962496..963803 1 NC_009617.1 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 963803 5292021 Cbei_0793 Clostridium beijerinckii NCIMB 8052 L-aspartate oxidase YP_001307933.1 962496 D 290402 CDS YP_001307934.1 150015680 5292022 963778..964623 1 NC_009617.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; KEGG: cno:NT01CX_0088 nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide pyrophosphorylase 964623 5292022 Cbei_0794 Clostridium beijerinckii NCIMB 8052 nicotinate-nucleotide pyrophosphorylase YP_001307934.1 963778 D 290402 CDS YP_001307935.1 150015681 5292023 964799..965533 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cth:Cthe_0035 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin 965533 5292023 Cbei_0795 Clostridium beijerinckii NCIMB 8052 4Fe-4S ferredoxin YP_001307935.1 964799 D 290402 CDS YP_001307936.1 150015682 5292024 965754..966188 1 NC_009617.1 PFAM: UspA domain protein; KEGG: gme:Gmet_2678 UspA; UspA domain-containing protein 966188 5292024 Cbei_0796 Clostridium beijerinckii NCIMB 8052 UspA domain-containing protein YP_001307936.1 965754 D 290402 CDS YP_001307937.1 150015683 5292025 966503..966748 1 NC_009617.1 hypothetical protein 966748 5292025 Cbei_0797 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307937.1 966503 D 290402 CDS YP_001307938.1 150015684 5292026 966779..967798 1 NC_009617.1 TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase, class Ib; KEGG: lsa:LSA0327 tryptophanyl--tRNA synthetase; tryptophanyl-tRNA synthetase 967798 5292026 Cbei_0798 Clostridium beijerinckii NCIMB 8052 tryptophanyl-tRNA synthetase YP_001307938.1 966779 D 290402 CDS YP_001307939.1 150015685 5292027 967830..968285 1 NC_009617.1 hypothetical protein 968285 5292027 Cbei_0799 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307939.1 967830 D 290402 CDS YP_001307940.1 150015686 5292028 complement(968339..969565) 1 NC_009617.1 PFAM: peptidase M29, aminopeptidase II; KEGG: ctc:CTC01997 aminopeptidase II; peptidase M29, aminopeptidase II 969565 5292028 Cbei_0800 Clostridium beijerinckii NCIMB 8052 peptidase M29, aminopeptidase II YP_001307940.1 968339 R 290402 CDS YP_001307941.1 150015687 5292029 969879..972482 1 NC_009617.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 972482 5292029 Cbei_0801 Clostridium beijerinckii NCIMB 8052 DNA polymerase I YP_001307941.1 969879 D 290402 CDS YP_001307942.1 150015688 5292030 972464..973117 1 NC_009617.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 973117 coaE 5292030 coaE Clostridium beijerinckii NCIMB 8052 dephospho-CoA kinase YP_001307942.1 972464 D 290402 CDS YP_001307943.1 150015689 5292031 973132..973767 1 NC_009617.1 PFAM: Lytic transglycosylase, catalytic; KEGG: cpr:CPR_1960 secreted protein; lytic transglycosylase 973767 5292031 Cbei_0803 Clostridium beijerinckii NCIMB 8052 lytic transglycosylase YP_001307943.1 973132 D 290402 CDS YP_001307944.1 150015690 5296333 974346..976055 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01881 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 976055 5296333 Cbei_0804 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001307944.1 974346 D 290402 CDS YP_001307945.1 150015691 5292033 976343..978640 1 NC_009617.1 KEGG: cno:NT01CX_0286 phage infection protein; phage infection protein 978640 5292033 Cbei_0805 Clostridium beijerinckii NCIMB 8052 phage infection protein YP_001307945.1 976343 D 290402 CDS YP_001307946.1 150015692 5292034 978675..980966 1 NC_009617.1 KEGG: cno:NT01CX_0286 phage infection protein; phage infection protein 980966 5292034 Cbei_0806 Clostridium beijerinckii NCIMB 8052 phage infection protein YP_001307946.1 978675 D 290402 CDS YP_001307947.1 150015693 5292035 981137..983047 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cpe:CPE1987 two-component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 983047 5292035 Cbei_0807 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001307947.1 981137 D 290402 CDS YP_001307948.1 150015694 5292036 983050..985065 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cpf:CPF_2241 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 985065 5292036 Cbei_0808 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001307948.1 983050 D 290402 CDS YP_001307949.1 150015695 5292037 985260..985760 1 NC_009617.1 PFAM: TspO/MBR family protein; KEGG: cpr:CPR_1952 TspO/MBR family protein; TspO and MBR-like protein 985760 5292037 Cbei_0809 Clostridium beijerinckii NCIMB 8052 TspO and MBR-like protein YP_001307949.1 985260 D 290402 CDS YP_001307950.1 150015696 5292038 986071..988377 1 NC_009617.1 KEGG: cpr:CPR_2023 ATP-dependent protease; ATP-dependent protease 988377 5292038 Cbei_0810 Clostridium beijerinckii NCIMB 8052 ATP-dependent protease YP_001307950.1 986071 D 290402 CDS YP_001307951.1 150015697 5292039 988587..989657 1 NC_009617.1 KEGG: cef:CE0340 transposase; hypothetical protein 989657 5292039 Cbei_0811 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307951.1 988587 D 290402 CDS YP_001307952.1 150015698 5292040 990046..990381 1 NC_009617.1 TIGRFAM: anti-anti-sigma factor; Anti-sigma F factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cpr:CPR_2022 anti-sigma F factor antagonist; anti-sigma-factor antagonist 990381 5292040 Cbei_0812 Clostridium beijerinckii NCIMB 8052 anti-sigma-factor antagonist YP_001307952.1 990046 D 290402 CDS YP_001307953.1 150015699 5292041 990396..990827 1 NC_009617.1 binds to sigma F preventing its association with RNA polymerase during sporulation; anti-sigma F factor 990827 5292041 Cbei_0813 Clostridium beijerinckii NCIMB 8052 anti-sigma F factor YP_001307953.1 990396 D 290402 CDS YP_001307954.1 150015700 5292042 990838..991593 1 NC_009617.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the prespore at the onset of sporulation. Interaction with spoIIAB inhibits sigma F activity throughout the cell before the formation of the asymmetric septum; after septation the interaction is confined to the mother cell, and sigma F activity is released in the prespore.; sporulation sigma factor SigF 991593 5292042 Cbei_0814 Clostridium beijerinckii NCIMB 8052 sporulation sigma factor SigF YP_001307954.1 990838 D 290402 CDS YP_001307955.1 150015701 5292043 991795..992262 1 NC_009617.1 TIGRFAM: Sporulation stage V, protein AC; PFAM: SpoVA protein; KEGG: ctc:CTC02245 stage V sporulation protein AC; sporulation stage V, protein AC 992262 5292043 Cbei_0815 Clostridium beijerinckii NCIMB 8052 sporulation stage V, protein AC YP_001307955.1 991795 D 290402 CDS YP_001307956.1 150015702 5292044 992365..993384 1 NC_009617.1 PFAM: Stage V sporulation AD family protein; KEGG: cpf:CPF_2303 stage V sporulation protein AD; stage V sporulation protein AD 993384 5292044 Cbei_0816 Clostridium beijerinckii NCIMB 8052 stage V sporulation protein AD YP_001307956.1 992365 D 290402 CDS YP_001307957.1 150015703 5292045 993457..993813 1 NC_009617.1 TIGRFAM: Sporulation stage V, protein AE; PFAM: SpoVA protein; KEGG: cpr:CPR_2017 stage V sporulation protein AE; sporulation stage V, protein AE 993813 5292045 Cbei_0817 Clostridium beijerinckii NCIMB 8052 sporulation stage V, protein AE YP_001307957.1 993457 D 290402 CDS YP_001307958.1 150015704 5292046 994048..996567 1 NC_009617.1 PFAM: E1-E2 ATPase-associated domain protein; KEGG: cno:NT01CX_0068 probable calcium-transporting ATPase; E1-E2 ATPase-associated domain-containing protein 996567 5292046 Cbei_0818 Clostridium beijerinckii NCIMB 8052 E1-E2 ATPase-associated domain-containing protein YP_001307958.1 994048 D 290402 CDS YP_001307959.1 150015705 5292047 996572..998263 1 NC_009617.1 PFAM: ComEC/Rec2-related protein; KEGG: cno:NT01CX_0067 ComE operon protein 3; ComEC/Rec2-like protein 998263 5292047 Cbei_0819 Clostridium beijerinckii NCIMB 8052 ComEC/Rec2-like protein YP_001307959.1 996572 D 290402 CDS YP_001307960.1 150015706 5292048 998324..999358 1 NC_009617.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 999358 holA 5292048 holA Clostridium beijerinckii NCIMB 8052 DNA polymerase III subunit delta YP_001307960.1 998324 D 290402 CDS YP_001307961.1 150015707 5292049 complement(999596..999859) 1 NC_009617.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 999859 rpsT 5292049 rpsT Clostridium beijerinckii NCIMB 8052 30S ribosomal protein S20 YP_001307961.1 999596 R 290402 CDS YP_001307962.1 150015708 5292050 1000032..1001015 1 NC_009617.1 Initiates the rapid degradation of small, acid-soluble proteins during spore germination; germination protease 1001015 5292050 Cbei_0822 Clostridium beijerinckii NCIMB 8052 germination protease YP_001307962.1 1000032 D 290402 CDS YP_001307963.1 150015709 5292051 1001231..1002295 1 NC_009617.1 PFAM: Stage II sporulation P family protein; KEGG: cpr:CPR_2012 stage II sporulation protein P; stage II sporulation P family protein 1002295 5292051 Cbei_0823 Clostridium beijerinckii NCIMB 8052 stage II sporulation P family protein YP_001307963.1 1001231 D 290402 CDS YP_001307964.1 150015710 5292052 1002634..1002963 1 NC_009617.1 hypothetical protein 1002963 5292052 Cbei_0824 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307964.1 1002634 D 290402 CDS YP_001307965.1 150015711 5292053 1003129..1004940 1 NC_009617.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1004940 5292053 Cbei_0825 Clostridium beijerinckii NCIMB 8052 GTP-binding protein LepA YP_001307965.1 1003129 D 290402 CDS YP_001307966.1 150015712 5292054 1005121..1005561 1 NC_009617.1 KEGG: cpe:CPE1377 hypothetical protein; hypothetical protein 1005561 5292054 Cbei_0826 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307966.1 1005121 D 290402 CDS YP_001307967.1 150015713 5292055 1005777..1006904 1 NC_009617.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1006904 5292055 Cbei_0827 Clostridium beijerinckii NCIMB 8052 coproporphyrinogen III oxidase YP_001307967.1 1005777 D 290402 CDS YP_001307968.1 150015714 5292056 1007143..1008171 1 NC_009617.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 1008171 hrcA 5292056 hrcA Clostridium beijerinckii NCIMB 8052 heat-inducible transcription repressor YP_001307968.1 1007143 D 290402 CDS YP_001307969.1 150015715 5292057 1008209..1008832 1 NC_009617.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 1008832 5292057 Cbei_0829 Clostridium beijerinckii NCIMB 8052 heat shock protein GrpE YP_001307969.1 1008209 D 290402 CDS YP_001307970.1 150015716 5292058 1008938..1010782 1 NC_009617.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 1010782 dnaK 5292058 dnaK Clostridium beijerinckii NCIMB 8052 molecular chaperone DnaK YP_001307970.1 1008938 D 290402 CDS YP_001307971.1 150015717 5292059 1010893..1012026 1 NC_009617.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 1012026 5292059 Cbei_0831 Clostridium beijerinckii NCIMB 8052 chaperone protein DnaJ YP_001307971.1 1010893 D 290402 CDS YP_001307972.1 150015718 5292060 1012187..1013737 1 NC_009617.1 PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: cac:CAC0094 ferredoxin-nitrite reductase; nitrite and sulfite reductase 4Fe-4S subunit 1013737 5292060 Cbei_0832 Clostridium beijerinckii NCIMB 8052 nitrite and sulfite reductase 4Fe-4S subunit YP_001307972.1 1012187 D 290402 CDS YP_001307973.1 150015719 5292061 1014159..1014818 1 NC_009617.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 1014818 trmB 5292061 trmB Clostridium beijerinckii NCIMB 8052 tRNA (guanine-N(7)-)-methyltransferase YP_001307973.1 1014159 D 290402 CDS YP_001307974.1 150015720 5292062 1015518..1016462 1 NC_009617.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 1016462 prmA 5292062 prmA Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L11 methyltransferase YP_001307974.1 1015518 D 290402 CDS YP_001307975.1 150015721 5292063 1016669..1017436 1 NC_009617.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 1017436 5292063 Cbei_0835 Clostridium beijerinckii NCIMB 8052 16S ribosomal RNA methyltransferase RsmE YP_001307975.1 1016669 D 290402 CDS YP_001307976.1 150015722 5292064 1017541..1018839 1 NC_009617.1 TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB; KEGG: cpr:CPR_1997 MiaB-like tRNA modifying enzyme; MiaB-like tRNA modifying protein 1018839 5292064 Cbei_0836 Clostridium beijerinckii NCIMB 8052 MiaB-like tRNA modifying protein YP_001307976.1 1017541 D 290402 CDS YP_001307977.1 150015723 5292065 1018989..1019333 1 NC_009617.1 PFAM: histidine triad (HIT) protein; KEGG: cpf:CPF_2281 HIT family protein; histidine triad (HIT) protein 1019333 5292065 Cbei_0837 Clostridium beijerinckii NCIMB 8052 histidine triad (HIT) protein YP_001307977.1 1018989 D 290402 CDS YP_001307978.1 150015724 5292066 1019476..1019652 1 NC_009617.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1019652 rpsU 5292066 rpsU Clostridium beijerinckii NCIMB 8052 30S ribosomal protein S21 YP_001307978.1 1019476 D 290402 CDS YP_001307979.1 150015725 5292067 1019683..1020135 1 NC_009617.1 PFAM: GatB/Yqey domain protein; KEGG: cpr:CPR_1994 GatB/YqeY domain protein; GatB/Yqey domain-containing protein 1020135 5292067 Cbei_0839 Clostridium beijerinckii NCIMB 8052 GatB/Yqey domain-containing protein YP_001307979.1 1019683 D 290402 CDS YP_001307980.1 150015726 5292068 1020424..1020702 1 NC_009617.1 PFAM: protein of unknown function DUF1429; KEGG: cno:NT01CX_0049 hypothetical protein; hypothetical protein 1020702 5292068 Cbei_0840 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307980.1 1020424 D 290402 CDS YP_001307981.1 150015727 5292069 1020709..1021836 1 NC_009617.1 PFAM: stage IV sporulation YqfD; KEGG: cpr:CPR_1992 stage IV sporulation protein; stage IV sporulation YqfD 1021836 5292069 Cbei_0841 Clostridium beijerinckii NCIMB 8052 stage IV sporulation YqfD YP_001307981.1 1020709 D 290402 CDS YP_001307982.1 150015728 5292070 1021897..1023981 1 NC_009617.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; metal-dependent phosphohydrolase, 7TM intracellular region; metal-dependent phosphohydrolase, 7TM extracellular region; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cpf:CPF_2276 hydrolase; metal dependent phosphohydrolase 1023981 5292070 Cbei_0842 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001307982.1 1021897 D 290402 CDS YP_001307983.1 150015729 5292071 1024008..1024511 1 NC_009617.1 PFAM: protein of unknown function UPF0054; KEGG: cpf:CPF_2275 conserved hypothetical protein TIGR00043; metalloprotease 1024511 5292071 Cbei_0843 Clostridium beijerinckii NCIMB 8052 metalloprotease YP_001307983.1 1024008 D 290402 CDS YP_001307984.1 150015730 5292072 1024547..1025248 1 NC_009617.1 PFAM: phosphoesterase, PA-phosphatase related; diacylglycerol kinase; KEGG: cpf:CPF_2274 diacylglycerol kinase/PAP2 family protein; diacylglycerol kinase 1025248 5292072 Cbei_0844 Clostridium beijerinckii NCIMB 8052 diacylglycerol kinase YP_001307984.1 1024547 D 290402 CDS YP_001307985.1 150015731 5292073 1025504..1026400 1 NC_009617.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 1026400 era 5292073 era Clostridium beijerinckii NCIMB 8052 GTP-binding protein Era YP_001307985.1 1025504 D 290402 CDS YP_001307986.1 150015732 5292074 1026465..1027214 1 NC_009617.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 1027214 recO 5292074 recO Clostridium beijerinckii NCIMB 8052 DNA repair protein RecO YP_001307986.1 1026465 D 290402 CDS YP_001307987.1 150015733 5292075 1027221..1027850 1 NC_009617.1 PFAM: ubiquitin-associated- domain-containing protein; KEGG: cpr:CPR_1985 N-terminal truncated of elongation factor Ts; ubiquitin-associated domain-containing protein 1027850 5292075 Cbei_0847 Clostridium beijerinckii NCIMB 8052 ubiquitin-associated domain-containing protein YP_001307987.1 1027221 D 290402 CDS YP_001307988.1 150015734 5292076 1028050..1028688 1 NC_009617.1 PFAM: CBS domain containing protein; Helix-turn-helix, type 11 domain protein; KEGG: cpf:CPF_2269 CBS domain protein; signal-transduction protein 1028688 5292076 Cbei_0848 Clostridium beijerinckii NCIMB 8052 signal-transduction protein YP_001307988.1 1028050 D 290402 CDS YP_001307989.1 150015735 5292077 1028771..1031398 1 NC_009617.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 1031398 5292077 Cbei_0849 Clostridium beijerinckii NCIMB 8052 pyruvate phosphate dikinase YP_001307989.1 1028771 D 290402 CDS YP_001307990.1 150015736 5292078 complement(1031677..1032744) 1 NC_009617.1 TIGRFAM: Spore coat protein CotS; KEGG: ctc:CTC02013 spore coat protein S; spore coat protein CotS 1032744 5292078 Cbei_0850 Clostridium beijerinckii NCIMB 8052 spore coat protein CotS YP_001307990.1 1031677 R 290402 CDS YP_001307991.1 150015737 5292079 1033074..1034099 1 NC_009617.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 1034099 5292079 Cbei_0851 Clostridium beijerinckii NCIMB 8052 deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_001307991.1 1033074 D 290402 CDS YP_001307992.1 150015738 5292080 1034376..1036166 1 NC_009617.1 synthesizes RNA primers at the replication forks; DNA primase 1036166 dnaG 5292080 dnaG Clostridium beijerinckii NCIMB 8052 DNA primase YP_001307992.1 1034376 D 290402 CDS YP_001307993.1 150015739 5292081 1036172..1037302 1 NC_009617.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium; RNA polymerase sigma factor RpoD 1037302 5292081 Cbei_0853 Clostridium beijerinckii NCIMB 8052 RNA polymerase sigma factor RpoD YP_001307993.1 1036172 D 290402 CDS YP_001307994.1 150015740 5292082 1037533..1038225 1 NC_009617.1 PFAM: protein of unknown function DUF633; KEGG: cpf:CPF_2262 hypothetical protein; hypothetical protein 1038225 5292082 Cbei_0854 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307994.1 1037533 D 290402 CDS YP_001307995.1 150015741 5292083 1038237..1039028 1 NC_009617.1 PFAM: protein of unknown function DUF34; KEGG: cpr:CPR_1972 conserved hypothetical protein TIGR00486; hypothetical protein 1039028 5292083 Cbei_0855 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307995.1 1038237 D 290402 CDS YP_001307996.1 150015742 5292084 1039185..1039490 1 NC_009617.1 hypothetical protein 1039490 5292084 Cbei_0856 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001307996.1 1039185 D 290402 CDS YP_001307997.1 150015743 5296334 1040265..1042115 1 NC_009617.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: cpf:CPF_2369 subtilase family protein; peptidase S8/S53 subtilisin kexin sedolisin 1042115 5296334 Cbei_0857 Clostridium beijerinckii NCIMB 8052 peptidase S8/S53 subtilisin kexin sedolisin YP_001307997.1 1040265 D 290402 CDS YP_001307998.1 150015744 5292086 1042112..1043830 1 NC_009617.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: cpe:CPE2112 hypothetical protein; peptidase S8/S53 subtilisin kexin sedolisin 1043830 5292086 Cbei_0858 Clostridium beijerinckii NCIMB 8052 peptidase S8/S53 subtilisin kexin sedolisin YP_001307998.1 1042112 D 290402 CDS YP_001307999.1 150015745 5292087 complement(1043972..1044724) 1 NC_009617.1 PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: tte:TTE2700 predicted glutamine amidotransferases; peptidase C26 1044724 5292087 Cbei_0859 Clostridium beijerinckii NCIMB 8052 peptidase C26 YP_001307999.1 1043972 R 290402 CDS YP_001308000.1 150015746 5292088 1045162..1045929 1 NC_009617.1 SMART: transglutaminase domain protein; KEGG: swo:Swol_0169 hypothetical protein; transglutaminase domain-containing protein 1045929 5292088 Cbei_0860 Clostridium beijerinckii NCIMB 8052 transglutaminase domain-containing protein YP_001308000.1 1045162 D 290402 CDS YP_001308001.1 150015747 5292089 1046200..1047309 1 NC_009617.1 PFAM: ABC transporter; TOBE domain protein; Transport-associated OB domain protein; SMART: ATPase AAA; KEGG: cpr:CPR_2340 ABC transporter domain protein; ABC transporter 1047309 5292089 Cbei_0861 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001308001.1 1046200 D 290402 CDS YP_001308002.1 150015748 5292090 1047340..1048284 1 NC_009617.1 KEGG: cpf:CPF_2653 hypothetical protein; PucR family transcriptional regulator 1048284 5292090 Cbei_0862 Clostridium beijerinckii NCIMB 8052 PucR family transcriptional regulator YP_001308002.1 1047340 D 290402 CDS YP_001308003.1 150015749 5292091 1048695..1049711 1 NC_009617.1 PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: cpe:CPE2340 probable transcriptional regulator; alanine racemase 1049711 5292091 Cbei_0863 Clostridium beijerinckii NCIMB 8052 alanine racemase YP_001308003.1 1048695 D 290402 CDS YP_001308004.1 150015750 5292092 1049799..1051292 1 NC_009617.1 amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 1051292 5292092 Cbei_0864 Clostridium beijerinckii NCIMB 8052 4-alpha-glucanotransferase YP_001308004.1 1049799 D 290402 CDS YP_001308005.1 150015751 5292093 1051295..1053655 1 NC_009617.1 TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase, family 35; KEGG: cpf:CPF_2646 glycogen/starch/alpha-glucan phosphorylase; glycogen/starch/alpha-glucan phosphorylase 1053655 5292093 Cbei_0865 Clostridium beijerinckii NCIMB 8052 glycogen/starch/alpha-glucan phosphorylase YP_001308005.1 1051295 D 290402 CDS YP_001308006.1 150015752 5292094 1053974..1054933 1 NC_009617.1 Involved in the metabolism of aromatic amino acids; 2-hydroxyacid dehydrogenase 1054933 5292094 Cbei_0866 Clostridium beijerinckii NCIMB 8052 2-hydroxyacid dehydrogenase YP_001308006.1 1053974 D 290402 CDS YP_001308007.1 150015753 5292095 1055000..1055884 1 NC_009617.1 KEGG: ehi:53.t00013 ribulose-phosphate 3-epimerase; hypothetical protein 1055884 5292095 Cbei_0867 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308007.1 1055000 D 290402 CDS YP_001308008.1 150015754 5292096 1056195..1058363 1 NC_009617.1 PFAM: TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein; KEGG: cpr:CPR_1950 DNA topoisomerase; DNA topoisomerase 1058363 5292096 Cbei_0868 Clostridium beijerinckii NCIMB 8052 DNA topoisomerase YP_001308008.1 1056195 D 290402 CDS YP_001308009.1 150015755 5292097 complement(1058427..1059317) 1 NC_009617.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cpf:CPF_2925 oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 1059317 5292097 Cbei_0869 Clostridium beijerinckii NCIMB 8052 short-chain dehydrogenase/reductase SDR YP_001308009.1 1058427 R 290402 CDS YP_001308010.1 150015756 5292098 1059610..1060476 1 NC_009617.1 KEGG: tde:TDE0553 hypothetical protein; hypothetical protein 1060476 5292098 Cbei_0870 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308010.1 1059610 D 290402 CDS YP_001308011.1 150015757 5292099 1060903..1062135 1 NC_009617.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: cac:CAC0682 ammonium transporter (membrane protein nrgA); ammonium transporter 1062135 5292099 Cbei_0871 Clostridium beijerinckii NCIMB 8052 ammonium transporter YP_001308011.1 1060903 D 290402 CDS YP_001308012.1 150015758 5292100 1062609..1064609 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: cac:CAC2547 possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain; methyl-accepting chemotaxis sensory transducer 1064609 5292100 Cbei_0872 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001308012.1 1062609 D 290402 CDS YP_001308013.1 150015759 5292101 1064868..1065773 1 NC_009617.1 PFAM: metallophosphoesterase; KEGG: cac:CAC2806 predicted phosphohydrolase, Icc family; metallophosphoesterase 1065773 5292101 Cbei_0873 Clostridium beijerinckii NCIMB 8052 metallophosphoesterase YP_001308013.1 1064868 D 290402 CDS YP_001308014.1 150015760 5292102 1066488..1067222 1 NC_009617.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: cno:NT01CX_0958 maltose transacetylase; hexapaptide repeat-containing transferase 1067222 5292102 Cbei_0874 Clostridium beijerinckii NCIMB 8052 hexapaptide repeat-containing transferase YP_001308014.1 1066488 D 290402 CDS YP_001308015.1 150015761 5292103 1067258..1069366 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: bat:BAS1867 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1069366 5292103 Cbei_0875 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001308015.1 1067258 D 290402 CDS YP_001308016.1 150015762 5292104 complement(1069474..1070949) 1 NC_009617.1 TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+/solute symporter; KEGG: baa:BA_4188 sodium:solute symporter family; sodium/proline symporter 1070949 5292104 Cbei_0876 Clostridium beijerinckii NCIMB 8052 sodium/proline symporter YP_001308016.1 1069474 R 290402 CDS YP_001308017.1 150015763 5292105 1071279..1071869 1 NC_009617.1 KEGG: cac:CAC0620 ABC transporter periplasmic protein; ABC transporter substrate-binding protein 1071869 5292105 Cbei_0877 Clostridium beijerinckii NCIMB 8052 ABC transporter substrate-binding protein YP_001308017.1 1071279 D 290402 CDS YP_001308018.1 150015764 5292106 complement(1071844..1073457) 1 NC_009617.1 PFAM: Resolvase, N-terminal domain; Recombinase; KEGG: cac:CAC1956 site-specific recombinases, DNA invertase Pin homolog; resolvase domain-containing protein 1073457 5292106 Cbei_0878 Clostridium beijerinckii NCIMB 8052 resolvase domain-containing protein YP_001308018.1 1071844 R 290402 CDS YP_001308019.1 150015765 5292107 complement(1073559..1074056) 1 NC_009617.1 PFAM: protein of unknown function DUF955; KEGG: cpf:CPF_1607 hypothetical protein; hypothetical protein 1074056 5292107 Cbei_0879 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308019.1 1073559 R 290402 CDS YP_001308020.1 150015766 5292108 1074331..1075446 1 NC_009617.1 KEGG: lwe:lwe1074 hypothetical protein; hypothetical protein 1075446 5292108 Cbei_0880 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308020.1 1074331 D 290402 CDS YP_001308021.1 150015767 5292109 1075437..1076216 1 NC_009617.1 hypothetical protein 1076216 5292109 Cbei_0881 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308021.1 1075437 D 290402 CDS YP_001308022.1 150015768 5292110 1076251..1076931 1 NC_009617.1 KEGG: ana:alr3663 unknown protein; hypothetical protein 1076931 5292110 Cbei_0882 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308022.1 1076251 D 290402 CDS YP_001308023.1 150015769 5292111 1076938..1077351 1 NC_009617.1 KEGG: smu:SMU.1772c hypothetical protein; hypothetical protein 1077351 5292111 Cbei_0883 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308023.1 1076938 D 290402 CDS YP_001308024.1 150015770 5292112 complement(1077807..1078640) 1 NC_009617.1 hypothetical protein 1078640 5292112 Cbei_0884 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308024.1 1077807 R 290402 CDS YP_001308025.1 150015771 5292113 complement(1078725..1080272) 1 NC_009617.1 KEGG: dps:DP1566 hypothetical protein; hypothetical protein 1080272 5292113 Cbei_0885 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308025.1 1078725 R 290402 CDS YP_001308026.1 150015772 5292114 complement(1080355..1080696) 1 NC_009617.1 PFAM: helix-turn-helix domain protein; KEGG: cpf:CPF_1604 DNA-binding protein; XRE family transcriptional regulator 1080696 5292114 Cbei_0886 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001308026.1 1080355 R 290402 CDS YP_001308027.1 150015773 5292115 1080855..1081055 1 NC_009617.1 PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 1081055 5292115 Cbei_0887 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001308027.1 1080855 D 290402 CDS YP_001308028.1 150015774 5292116 1081108..1081539 1 NC_009617.1 KEGG: chy:CHY_1694 prophage LambdaCh01, transcriptional regulator; prophage LambdaCh01, transcriptional regulator 1081539 5292116 Cbei_0888 Clostridium beijerinckii NCIMB 8052 prophage LambdaCh01, transcriptional regulator YP_001308028.1 1081108 D 290402 CDS YP_001308029.1 150015775 5292117 1081569..1081760 1 NC_009617.1 hypothetical protein 1081760 5292117 Cbei_0889 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308029.1 1081569 D 290402 CDS YP_001308030.1 150015776 5292118 1081796..1082095 1 NC_009617.1 hypothetical protein 1082095 5292118 Cbei_0890 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308030.1 1081796 D 290402 CDS YP_001308031.1 150015777 5292119 1082185..1082367 1 NC_009617.1 hypothetical protein 1082367 5292119 Cbei_0891 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308031.1 1082185 D 290402 CDS YP_001308032.1 150015778 5292120 1082415..1083248 1 NC_009617.1 KEGG: efa:EF2027 hypothetical protein; hypothetical protein 1083248 5292120 Cbei_0892 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308032.1 1082415 D 290402 CDS YP_001308033.1 150015779 5292121 1083241..1084020 1 NC_009617.1 KEGG: cno:NT01CX_2185 hypothetical protein; hypothetical protein 1084020 5292121 Cbei_0893 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308033.1 1083241 D 290402 CDS YP_001308034.1 150015780 5292122 complement(1084294..1084617) 1 NC_009617.1 hypothetical protein 1084617 5292122 Cbei_0894 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308034.1 1084294 R 290402 CDS YP_001308035.1 150015781 5292123 1084823..1084969 1 NC_009617.1 hypothetical protein 1084969 5292123 Cbei_0895 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308035.1 1084823 D 290402 CDS YP_001308036.1 150015782 5292124 complement(1085034..1085351) 1 NC_009617.1 hypothetical protein 1085351 5292124 Cbei_0896 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308036.1 1085034 R 290402 CDS YP_001308037.1 150015783 5292125 complement(1085395..1085706) 1 NC_009617.1 hypothetical protein 1085706 5292125 Cbei_0897 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308037.1 1085395 R 290402 CDS YP_001308038.1 150015784 5292126 1086084..1086383 1 NC_009617.1 hypothetical protein 1086383 5292126 Cbei_0898 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308038.1 1086084 D 290402 CDS YP_001308039.1 150015785 5292127 1086742..1087134 1 NC_009617.1 hypothetical protein 1087134 5292127 Cbei_0899 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308039.1 1086742 D 290402 CDS YP_001308040.1 150015786 5292128 1087570..1088175 1 NC_009617.1 PFAM: phage integrase family protein; KEGG: bat:BAS3811 prophage LambdaBa02, site-specific recombinase, phage integrase family; phage integrase family protein 1088175 5292128 Cbei_0900 Clostridium beijerinckii NCIMB 8052 phage integrase family protein YP_001308040.1 1087570 D 290402 CDS YP_001308041.1 150015787 5292129 1088382..1088561 1 NC_009617.1 hypothetical protein 1088561 5292129 Cbei_0901 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308041.1 1088382 D 290402 CDS YP_001308042.1 150015788 5292130 1088636..1089316 1 NC_009617.1 KEGG: spm:spyM18_1304 hypothetical protein; hypothetical protein 1089316 5292130 Cbei_0902 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308042.1 1088636 D 290402 CDS YP_001308043.1 150015789 5292131 1089442..1089747 1 NC_009617.1 KEGG: bat:BAS0440 prophage LambdaBa04, GP54; prophage LambdaBa04, GP54 1089747 5292131 Cbei_0903 Clostridium beijerinckii NCIMB 8052 prophage LambdaBa04, GP54 YP_001308043.1 1089442 D 290402 CDS YP_001308044.1 150015790 5292132 1089740..1089922 1 NC_009617.1 hypothetical protein 1089922 5292132 Cbei_0904 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308044.1 1089740 D 290402 CDS YP_001308045.1 150015791 5292133 1089953..1090390 1 NC_009617.1 KEGG: bcz:BCZK3430 hypothetical protein; hypothetical protein 1090390 5292133 Cbei_0905 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308045.1 1089953 D 290402 CDS YP_001308046.1 150015792 5292134 1090390..1092054 1 NC_009617.1 PFAM: phage Terminase; KEGG: bat:BAS0443 prophage LambdaBa04, terminase, large subunit; phage terminase 1092054 5292134 Cbei_0906 Clostridium beijerinckii NCIMB 8052 phage terminase YP_001308046.1 1090390 D 290402 CDS YP_001308047.1 150015793 5292135 1092072..1093295 1 NC_009617.1 PFAM: phage portal protein; KEGG: bat:BAS3509 hypothetical protein; phage portal protein 1093295 5292135 Cbei_0907 Clostridium beijerinckii NCIMB 8052 phage portal protein YP_001308047.1 1092072 D 290402 CDS YP_001308048.1 150015794 5292136 1093246..1093839 1 NC_009617.1 TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35, phage prohead HK97; KEGG: cpf:CPF_1585 phage prohead protease, HK97 family; HK97 family phage prohead protease 1093839 5292136 Cbei_0908 Clostridium beijerinckii NCIMB 8052 HK97 family phage prohead protease YP_001308048.1 1093246 D 290402 CDS YP_001308049.1 150015795 5292137 1093859..1095061 1 NC_009617.1 TIGRFAM: phage major capsid protein, HK97 family; PFAM: phage major capsid protein, HK97; KEGG: bat:BAS0446 prophage LambdaBa04, major capsid protein; HK97 family phage major capsid protein 1095061 5292137 Cbei_0909 Clostridium beijerinckii NCIMB 8052 HK97 family phage major capsid protein YP_001308049.1 1093859 D 290402 CDS YP_001308050.1 150015796 5292138 1095161..1095445 1 NC_009617.1 TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: bat:BAS0448 prophage LambdaBa04, DNA packaging protein; phage protein 1095445 5292138 Cbei_0910 Clostridium beijerinckii NCIMB 8052 phage protein YP_001308050.1 1095161 D 290402 CDS YP_001308051.1 150015797 5292139 1095442..1095780 1 NC_009617.1 TIGRFAM: phage head-tail adaptor; phage head-tail adaptor 1095780 5292139 Cbei_0911 Clostridium beijerinckii NCIMB 8052 phage head-tail adaptor YP_001308051.1 1095442 D 290402 CDS YP_001308052.1 150015798 5292140 1095785..1096240 1 NC_009617.1 hypothetical protein 1096240 5292140 Cbei_0912 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308052.1 1095785 D 290402 CDS YP_001308053.1 150015799 5292141 1096242..1096733 1 NC_009617.1 hypothetical protein 1096733 5292141 Cbei_0913 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308053.1 1096242 D 290402 CDS YP_001308054.1 150015800 5292142 1096744..1097835 1 NC_009617.1 KEGG: ctc:CTC02125 phage-like element pbsx protein XkdK; hypothetical protein 1097835 5292142 Cbei_0914 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308054.1 1096744 D 290402 CDS YP_001308055.1 150015801 5292143 1097855..1098286 1 NC_009617.1 KEGG: ctc:CTC02124 phage-like element pbsx protein XkdM; phage-like element pbsx protein XkdM 1098286 5292143 Cbei_0915 Clostridium beijerinckii NCIMB 8052 phage-like element pbsx protein XkdM YP_001308055.1 1097855 D 290402 CDS YP_001308056.1 150015802 5292144 1098348..1098758 1 NC_009617.1 hypothetical protein 1098758 5292144 Cbei_0916 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308056.1 1098348 D 290402 CDS YP_001308057.1 150015803 5292145 1099046..1099999 1 NC_009617.1 KEGG: mac:MA3805 hypothetical protein; hypothetical protein 1099999 5292145 Cbei_0917 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308057.1 1099046 D 290402 CDS YP_001308058.1 150015804 5292146 1100203..1101060 1 NC_009617.1 KEGG: lin:lin0168 hypothetical protein; hypothetical protein 1101060 5292146 Cbei_0918 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308058.1 1100203 D 290402 CDS YP_001308059.1 150015805 5292147 1101076..1101843 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: spn:SP_0377 choline binding protein C; cell wall binding repeat-containing protein 1101843 5292147 Cbei_0919 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001308059.1 1101076 D 290402 CDS YP_001308060.1 150015806 5292148 1101852..1102763 1 NC_009617.1 KEGG: ctc:CTC02117 phage-like element pbsx protein XkdQ; hypothetical protein 1102763 5292148 Cbei_0920 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308060.1 1101852 D 290402 CDS YP_001308061.1 150015807 5292149 1102772..1103092 1 NC_009617.1 hypothetical protein 1103092 5292149 Cbei_0921 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308061.1 1102772 D 290402 CDS YP_001308062.1 150015808 5292150 1103109..1103555 1 NC_009617.1 KEGG: ctc:CTC02116 phage-like element pbsx protein XkdS; hypothetical protein 1103555 5292150 Cbei_0922 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308062.1 1103109 D 290402 CDS YP_001308063.1 150015809 5292151 1103558..1104625 1 NC_009617.1 PFAM: Baseplate J family protein; KEGG: ctc:CTC02115 phage-like element pbsx protein XkdT; baseplate J family protein 1104625 5292151 Cbei_0923 Clostridium beijerinckii NCIMB 8052 baseplate J family protein YP_001308063.1 1103558 D 290402 CDS YP_001308064.1 150015810 5292152 1104627..1106450 1 NC_009617.1 KEGG: ctc:CTC02114 hypothetical protein; hypothetical protein 1106450 5292152 Cbei_0924 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308064.1 1104627 D 290402 CDS YP_001308065.1 150015811 5292153 1106452..1107057 1 NC_009617.1 KEGG: ctc:CTC02112 phage-like element pbsx protein XkdT; phage-like element pbsx protein XkdT 1107057 5292153 Cbei_0925 Clostridium beijerinckii NCIMB 8052 phage-like element pbsx protein XkdT YP_001308065.1 1106452 D 290402 CDS YP_001308066.1 150015812 5292154 1107072..1108550 1 NC_009617.1 KEGG: gka:GK0543 hypothetical protein; hypothetical protein 1108550 5292154 Cbei_0926 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308066.1 1107072 D 290402 CDS YP_001308067.1 150015813 5292155 1108578..1108850 1 NC_009617.1 hypothetical protein 1108850 5292155 Cbei_0927 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308067.1 1108578 D 290402 CDS YP_001308068.1 150015814 5292156 1108843..1109058 1 NC_009617.1 hypothetical protein 1109058 5292156 Cbei_0928 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308068.1 1108843 D 290402 CDS YP_001308069.1 150015815 5292157 1109236..1109472 1 NC_009617.1 KEGG: cpr:CPR_C0053 hypothetical protein; hypothetical protein 1109472 5292157 Cbei_0929 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308069.1 1109236 D 290402 CDS YP_001308070.1 150015816 5292158 1109488..1109883 1 NC_009617.1 KEGG: cpf:CPF_0972 hypothetical protein; hypothetical protein 1109883 5292158 Cbei_0930 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308070.1 1109488 D 290402 CDS YP_001308071.1 150015817 5292159 1109954..1110742 1 NC_009617.1 PFAM: glycoside hydrolase, family 25; KEGG: cpf:CPF_0973 glycosyl hydrolase, family 25; glycoside hydrolase 1110742 5292159 Cbei_0931 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001308071.1 1109954 D 290402 CDS YP_001308072.1 150015818 5292160 complement(1111208..1111570) 1 NC_009617.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 1111570 5292160 Cbei_0932 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001308072.1 1111208 R 290402 CDS YP_001308073.1 150015819 5292161 1111658..1112134 1 NC_009617.1 KEGG: cno:NT01CX_1709 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein 1112134 5292161 Cbei_0933 Clostridium beijerinckii NCIMB 8052 ABC transporter substrate-binding protein YP_001308073.1 1111658 D 290402 CDS YP_001308074.1 150015820 5292162 1112169..1112936 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC0619 nitrate ABC transporter ATP binding protein; ABC transporter 1112936 5292162 Cbei_0934 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001308074.1 1112169 D 290402 CDS YP_001308075.1 150015821 5292163 1112968..1113759 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cno:NT01CX_1706 ABC transporter permease, cysTW family; binding-protein-dependent transport system inner membrane protein 1113759 5292163 Cbei_0935 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001308075.1 1112968 D 290402 CDS YP_001308076.1 150015822 5292164 1114063..1114419 1 NC_009617.1 PFAM: LrgA family protein; KEGG: ctc:CTC01825 conserved protein, murein hydrolase exporter; LrgA family protein 1114419 5292164 Cbei_0936 Clostridium beijerinckii NCIMB 8052 LrgA family protein YP_001308076.1 1114063 D 290402 CDS YP_001308077.1 150015823 5292165 1114459..1115172 1 NC_009617.1 PFAM: LrgB family protein; KEGG: cpr:CPR_1948 LrgB-like family protein; LrgB family protein 1115172 5292165 Cbei_0937 Clostridium beijerinckii NCIMB 8052 LrgB family protein YP_001308077.1 1114459 D 290402 CDS YP_001308078.1 150015824 5292166 1115508..1116644 1 NC_009617.1 KEGG: pfa:MAL13P1.137 hypothetical malaria antigen; hypothetical protein 1116644 5292166 Cbei_0938 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308078.1 1115508 D 290402 CDS YP_001308079.1 150015825 5292167 complement(1116818..1117867) 1 NC_009617.1 KEGG: cpr:CPR_1341 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein 1117867 5292167 Cbei_0939 Clostridium beijerinckii NCIMB 8052 D-galactose-binding periplasmic protein YP_001308079.1 1116818 R 290402 CDS YP_001308080.1 150015826 5292168 complement(1118041..1118625) 1 NC_009617.1 PFAM: flavin reductase domain protein, FMN-binding; KEGG: cac:CAC2437 hypothetical protein; flavin reductase domain-containing protein 1118625 5292168 Cbei_0940 Clostridium beijerinckii NCIMB 8052 flavin reductase domain-containing protein YP_001308080.1 1118041 R 290402 CDS YP_001308081.1 150015827 5292169 complement(1118731..1120053) 1 NC_009617.1 PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; KEGG: ctc:CTC00981 D-alanyl-D-alanine carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 1120053 5292169 Cbei_0941 Clostridium beijerinckii NCIMB 8052 serine-type D-Ala-D-Ala carboxypeptidase YP_001308081.1 1118731 R 290402 CDS YP_001308082.1 150015828 5292170 complement(1120219..1120941) 1 NC_009617.1 PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: cpr:CPR_1207 glutamine amidotransferase, CobB/CobQ family; glutamine amidotransferase 1120941 5292170 Cbei_0942 Clostridium beijerinckii NCIMB 8052 glutamine amidotransferase YP_001308082.1 1120219 R 290402 CDS YP_001308083.1 150015829 5292171 complement(1120960..1122318) 1 NC_009617.1 PFAM: Mur ligase, middle domain protein; domain of unknown function DUF1727; KEGG: cpf:CPF_1392 UDP-N-acetylmuramyl tripeptide synthetase MurC-like protein; hypothetical protein 1122318 5292171 Cbei_0943 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308083.1 1120960 R 290402 CDS YP_001308084.1 150015830 5292172 1122593..1124557 1 NC_009617.1 PFAM: protein of unknown function DUF710; KEGG: ehi:82.t00025 viral A-type inclusion protein repeat, Pfam: Nha1_C Rho_Binding ERM Prefoldin_2 WXG100 Vicilin_N TBPIP Myosin_tail_1 Filament YscO Bacillus_HBL HAP1_N EzrA DUF948 Rab5-bind Laminin_I MpPF2 MSG Spectrin LMP PROSITE: GLU_RICH LYS_RICH; hypothetical protein 1124557 5292172 Cbei_0944 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308084.1 1122593 D 290402 CDS YP_001308085.1 150015831 5292173 1124574..1126934 1 NC_009617.1 PFAM: peptidase U32; KEGG: cpr:CPR_1848 peptidase, U32 family; peptidase U32 1126934 5292173 Cbei_0945 Clostridium beijerinckii NCIMB 8052 peptidase U32 YP_001308085.1 1124574 D 290402 CDS YP_001308086.1 150015832 5292174 1127088..1129448 1 NC_009617.1 MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein 1129448 5292174 Cbei_0946 Clostridium beijerinckii NCIMB 8052 recombination and DNA strand exchange inhibitor protein YP_001308086.1 1127088 D 290402 CDS YP_001308087.1 150015833 5292175 1129624..1130352 1 NC_009617.1 PFAM: protein of unknown function DUF523; KEGG: ctc:CTC02272 purine nucleoside phosphorylase; hypothetical protein 1130352 5292175 Cbei_0947 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308087.1 1129624 D 290402 CDS YP_001308088.1 150015834 5292176 complement(1130634..1131269) 1 NC_009617.1 KEGG: cac:CAC0750 hypothetical protein; hypothetical protein 1131269 5292176 Cbei_0948 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308088.1 1130634 R 290402 CDS YP_001308089.1 150015835 5292177 1131730..1132530 1 NC_009617.1 PFAM: glycoside hydrolase, family 46; KEGG: bsu:BG11923 chitosanase; glycoside hydrolase 1132530 5292177 Cbei_0949 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001308089.1 1131730 D 290402 CDS YP_001308090.1 150015836 5292178 1133610..1134866 1 NC_009617.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system, EIIC; KEGG: ppe:PEPE_0023 cellobiose-specific PTS system IIC component; PTS system lactose/cellobiose family transporter subunit IIC 1134866 5292178 Cbei_0950 Clostridium beijerinckii NCIMB 8052 PTS system lactose/cellobiose family transporter subunit IIC YP_001308090.1 1133610 D 290402 CDS YP_001308091.1 150015837 5292179 1134917..1135225 1 NC_009617.1 PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: tte:TTE0335 Phosphotransferase system cellobiose-specific component IIB; phosphotransferase system, lactose/cellobiose-specific IIB subunit 1135225 5292179 Cbei_0951 Clostridium beijerinckii NCIMB 8052 phosphotransferase system, lactose/cellobiose-specific IIB subunit YP_001308091.1 1134917 D 290402 CDS YP_001308092.1 150015838 5292180 1135239..1135577 1 NC_009617.1 PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: tte:TTE0336 Phosphotransferase system cellobiose-specific component IIA; PTS system lactose/cellobiose-specific transporter subunit IIA 1135577 5292180 Cbei_0952 Clostridium beijerinckii NCIMB 8052 PTS system lactose/cellobiose-specific transporter subunit IIA YP_001308092.1 1135239 D 290402 CDS YP_001308093.1 150015839 5292181 1135777..1138476 1 NC_009617.1 PFAM: sigma-54 factor, interaction domain-containing protein; PTS system fructose subfamily IIA component; PRD domain protein; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; KEGG: tte:TTE0331 NtrC family transcriptional regulator, ATPase domain; sigma-54 factor interaction domain-containing protein 1138476 5292181 Cbei_0953 Clostridium beijerinckii NCIMB 8052 sigma-54 factor interaction domain-containing protein YP_001308093.1 1135777 D 290402 CDS YP_001308094.1 150015840 5292182 1138631..1141405 1 NC_009617.1 PFAM: sigma-54 factor, interaction domain-containing protein; PRD domain protein; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; KEGG: stm:STM4534 transcriptional regulator; sigma-54 factor interaction domain-containing protein 1141405 5292182 Cbei_0954 Clostridium beijerinckii NCIMB 8052 sigma-54 factor interaction domain-containing protein YP_001308094.1 1138631 D 290402 CDS YP_001308095.1 150015841 5292183 1141528..1141950 1 NC_009617.1 PFAM: PTS system fructose subfamily IIA component; KEGG: stm:STM4535 PTS system, mannose-specific II component; PTS system fructose subfamily transporter subunit IIA 1141950 5292183 Cbei_0955 Clostridium beijerinckii NCIMB 8052 PTS system fructose subfamily transporter subunit IIA YP_001308095.1 1141528 D 290402 CDS YP_001308096.1 150015842 5292184 1141965..1142435 1 NC_009617.1 PFAM: PTS system sorbose subfamily IIB component; KEGG: stm:STM4536 PTS system, mannose-specific II component; PTS system sorbose subfamily transporter subunit IIB 1142435 5292184 Cbei_0956 Clostridium beijerinckii NCIMB 8052 PTS system sorbose subfamily transporter subunit IIB YP_001308096.1 1141965 D 290402 CDS YP_001308097.1 150015843 5292185 1142450..1143214 1 NC_009617.1 PFAM: phosphotransferase system PTS, sorbose-specific IIC subunit; KEGG: lmf:LMOf2365_2024 PTS system, IIC component; PTS system sorbose-specific transporter subunit IIC 1143214 5292185 Cbei_0957 Clostridium beijerinckii NCIMB 8052 PTS system sorbose-specific transporter subunit IIC YP_001308097.1 1142450 D 290402 CDS YP_001308098.1 150015844 5292186 1143201..1144040 1 NC_009617.1 PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: fnu:FN0629 PTS system, IID component; PTS system mannose/fructose/sorbose family transporter subunit IID 1144040 5292186 Cbei_0958 Clostridium beijerinckii NCIMB 8052 PTS system mannose/fructose/sorbose family transporter subunit IID YP_001308098.1 1143201 D 290402 CDS YP_001308099.1 150015845 5292187 1144108..1145106 1 NC_009617.1 PFAM: sugar isomerase (SIS); KEGG: fnu:FN0627 glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; sugar isomerase (SIS) 1145106 5292187 Cbei_0959 Clostridium beijerinckii NCIMB 8052 sugar isomerase (SIS) YP_001308099.1 1144108 D 290402 CDS YP_001308100.1 150015846 5292188 1145178..1146041 1 NC_009617.1 PFAM: PfkB domain protein; KEGG: aau:AAur_0441 sugar kinase; ribokinase-like domain-containing protein 1146041 5292188 Cbei_0960 Clostridium beijerinckii NCIMB 8052 ribokinase-like domain-containing protein YP_001308100.1 1145178 D 290402 CDS YP_001308101.1 150015847 5292189 complement(1146248..1147117) 1 NC_009617.1 PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: bha:BH3372 hypothetical protein; phosphotransferase domain-containing protein 1147117 5292189 Cbei_0961 Clostridium beijerinckii NCIMB 8052 phosphotransferase domain-containing protein YP_001308101.1 1146248 R 290402 CDS YP_001308102.1 150015848 5292190 1147542..1150301 1 NC_009617.1 PFAM: sigma-54 factor, interaction domain-containing protein; ATPase AAA, central domain protein; PRD domain protein; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; KEGG: tte:TTE0191 AAA superfamily ATPase with N-terminal receiver domain; sigma-54 factor interaction domain-containing protein 1150301 5292190 Cbei_0962 Clostridium beijerinckii NCIMB 8052 sigma-54 factor interaction domain-containing protein YP_001308102.1 1147542 D 290402 CDS YP_001308103.1 150015849 5292191 1150413..1150853 1 NC_009617.1 PFAM: PTS system fructose subfamily IIA component; KEGG: bcl:ABC4070 PTS system, mannose-specific enzyme II, A component; PTS system fructose subfamily transporter subunit IIA 1150853 5292191 Cbei_0963 Clostridium beijerinckii NCIMB 8052 PTS system fructose subfamily transporter subunit IIA YP_001308103.1 1150413 D 290402 CDS YP_001308104.1 150015850 5292192 1150831..1151310 1 NC_009617.1 PFAM: PTS system sorbose subfamily IIB component; KEGG: bcl:ABC4071 PTS system, mannose-specific enzyme II, B component; PTS system sorbose subfamily transporter subunit IIB 1151310 5292192 Cbei_0964 Clostridium beijerinckii NCIMB 8052 PTS system sorbose subfamily transporter subunit IIB YP_001308104.1 1150831 D 290402 CDS YP_001308105.1 150015851 5292193 1151329..1152120 1 NC_009617.1 PFAM: phosphotransferase system PTS, sorbose-specific IIC subunit; KEGG: stm:STM0575 PTS system, mannose-specific II component; PTS system sorbose-specific transporter subunit IIC 1152120 5292193 Cbei_0965 Clostridium beijerinckii NCIMB 8052 PTS system sorbose-specific transporter subunit IIC YP_001308105.1 1151329 D 290402 CDS YP_001308106.1 150015852 5292194 1152113..1152913 1 NC_009617.1 PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: bcl:ABC4073 PTS system, mannose-specific enzyme II, D component; PTS system mannose/fructose/sorbose family transporter subunit IID 1152913 5292194 Cbei_0966 Clostridium beijerinckii NCIMB 8052 PTS system mannose/fructose/sorbose family transporter subunit IID YP_001308106.1 1152113 D 290402 CDS YP_001308107.1 150015853 5292195 1152942..1153997 1 NC_009617.1 PFAM: sugar isomerase (SIS); KEGG: stm:STM0573 inner membrane protein; sugar isomerase (SIS) 1153997 5292195 Cbei_0967 Clostridium beijerinckii NCIMB 8052 sugar isomerase (SIS) YP_001308107.1 1152942 D 290402 CDS YP_001308108.1 150015854 5292196 complement(1154253..1155731) 1 NC_009617.1 PFAM: polysaccharide biosynthesis protein; KEGG: cpf:CPF_0604 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 1155731 5292196 Cbei_0968 Clostridium beijerinckii NCIMB 8052 polysaccharide biosynthesis protein YP_001308108.1 1154253 R 290402 CDS YP_001308109.1 150015855 5292197 1155912..1156778 1 NC_009617.1 PFAM: helix-turn-helix domain protein; KEGG: cac:CAC0465 predicted transcriptional regulator, DicA/HipB/AnsR family; helix-turn-helix domain-containing protein 1156778 5292197 Cbei_0969 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001308109.1 1155912 D 290402 CDS YP_001308110.1 150015856 5292198 complement(1156951..1159167) 1 NC_009617.1 PFAM: peptidase M56, BlaR1; KEGG: tte:TTE1079 beta-lactamase regulatory protein 1; peptidase M56, BlaR1 1159167 5292198 Cbei_0970 Clostridium beijerinckii NCIMB 8052 peptidase M56, BlaR1 YP_001308110.1 1156951 R 290402 CDS YP_001308111.1 150015857 5292199 complement(1159314..1159709) 1 NC_009617.1 PFAM: Penicillinase repressor; KEGG: bcl:ABC0266 methicillin resistance regulatory protein MecI; CopY family transcriptional regulator 1159709 5292199 Cbei_0971 Clostridium beijerinckii NCIMB 8052 CopY family transcriptional regulator YP_001308111.1 1159314 R 290402 CDS YP_001308112.1 150015858 5292200 1160005..1162944 1 NC_009617.1 PFAM: SNF2-related protein; helicase domain protein; type III restriction protein, res subunit; zinc finger, SWIM domain protein; SNF2 helicase associated domain protein; SMART: DEAD-like helicases-like; KEGG: cac:CAC3441 DNA/RNA helicase, SNF2; non-specific serine/threonine protein kinase 1162944 5292200 Cbei_0972 Clostridium beijerinckii NCIMB 8052 non-specific serine/threonine protein kinase YP_001308112.1 1160005 D 290402 CDS YP_001308113.1 150015859 5292201 complement(1163230..1164096) 1 NC_009617.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: lwe:lwe2648 phosphosugar-binding transcriptional regulator, RpiR family; RpiR family transcriptional regulator 1164096 5292201 Cbei_0973 Clostridium beijerinckii NCIMB 8052 RpiR family transcriptional regulator YP_001308113.1 1163230 R 290402 CDS YP_001308114.1 150015860 5292202 1164671..1165498 1 NC_009617.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: lsl:LSL_1476 hydrolase, HAD superfamily; cof family hydrolase 1165498 5292202 Cbei_0974 Clostridium beijerinckii NCIMB 8052 cof family hydrolase YP_001308114.1 1164671 D 290402 CDS YP_001308115.1 150015861 5292203 1165539..1166324 1 NC_009617.1 TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: oih:OB0554 histidinol phosphatase; HisJ family histidinol phosphate phosphatase 1166324 5292203 Cbei_0975 Clostridium beijerinckii NCIMB 8052 HisJ family histidinol phosphate phosphatase YP_001308115.1 1165539 D 290402 CDS YP_001308116.1 150015862 5292204 1166565..1167077 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcz:BCZK2535 phosphinothricin N-acetyltransferase; N-acetyltransferase GCN5 1167077 5292204 Cbei_0976 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001308116.1 1166565 D 290402 CDS YP_001308117.1 150015863 5292205 complement(1167177..1168412) 1 NC_009617.1 PFAM: major facilitator superfamily MFS_1; KEGG: btl:BALH_2365 macrolide efflux protein; major facilitator superfamily transporter 1168412 5292205 Cbei_0977 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001308117.1 1167177 R 290402 CDS YP_001308118.1 150015864 5292206 1168583..1170037 1 NC_009617.1 PFAM: major facilitator superfamily MFS_1; KEGG: dsy:DSY0578 hypothetical protein; major facilitator superfamily transporter 1170037 5292206 Cbei_0978 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001308118.1 1168583 D 290402 CDS YP_001308119.1 150015865 5292207 complement(1170378..1170926) 1 NC_009617.1 KEGG: cpr:CPR_1191 hypothetical protein; hypothetical protein 1170926 5292207 Cbei_0979 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308119.1 1170378 R 290402 CDS YP_001308120.1 150015866 5292208 1171205..1172434 1 NC_009617.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: cpr:CPR_0204 nuclease SbcCD, D subunit; nuclease SbcCD subunit D 1172434 5292208 Cbei_0980 Clostridium beijerinckii NCIMB 8052 nuclease SbcCD subunit D YP_001308120.1 1171205 D 290402 CDS YP_001308121.1 150015867 5292209 1172409..1175900 1 NC_009617.1 PFAM: SMC domain protein; KEGG: cac:CAC2736 ATPase involved in DNA repair; SMC domain-containing protein 1175900 5292209 Cbei_0981 Clostridium beijerinckii NCIMB 8052 SMC domain-containing protein YP_001308121.1 1172409 D 290402 CDS YP_001308122.1 150015868 5292210 1176228..1176797 1 NC_009617.1 TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25; KEGG: cpf:CPF_2128 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 1176797 5292210 Cbei_0982 Clostridium beijerinckii NCIMB 8052 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 YP_001308122.1 1176228 D 290402 CDS YP_001308123.1 150015869 5292211 1177109..1178836 1 NC_009617.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: cpr:CPR_1841 phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/subunit 1178836 5292211 Cbei_0983 Clostridium beijerinckii NCIMB 8052 phosphoglucomutase/phosphomannomutase alpha/beta/subunit YP_001308123.1 1177109 D 290402 CDS YP_001308124.1 150015870 5292212 1179374..1180474 1 NC_009617.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cno:NT01CX_1777 TPR repeats containing protein; hypothetical protein 1180474 5292212 Cbei_0984 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308124.1 1179374 D 290402 CDS YP_001308125.1 150015871 5292213 1180597..1181322 1 NC_009617.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: cno:NT01CX_1798 teichoic acid biosynthesis protein A; WecB/TagA/CpsF family glycosyl transferase 1181322 5292213 Cbei_0985 Clostridium beijerinckii NCIMB 8052 WecB/TagA/CpsF family glycosyl transferase YP_001308125.1 1180597 D 290402 CDS YP_001308126.1 150015872 5292214 1181367..1182893 1 NC_009617.1 TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: cno:NT01CX_1790 integral membrane protein MviN; integral membrane protein MviN 1182893 5292214 Cbei_0986 Clostridium beijerinckii NCIMB 8052 integral membrane protein MviN YP_001308126.1 1181367 D 290402 CDS YP_001308127.1 150015873 5292215 1182905..1184194 1 NC_009617.1 KEGG: cpe:CPE1869 hypothetical protein; hypothetical protein 1184194 5292215 Cbei_0987 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308127.1 1182905 D 290402 CDS YP_001308128.1 150015874 5292216 1184195..1185358 1 NC_009617.1 PFAM: glycosyl transferase, group 1; KEGG: bth:BT_2936 glycosyltransferase; group 1 glycosyl transferase 1185358 5292216 Cbei_0988 Clostridium beijerinckii NCIMB 8052 group 1 glycosyl transferase YP_001308128.1 1184195 D 290402 CDS YP_001308129.1 150015875 5292217 1185342..1186565 1 NC_009617.1 PFAM: O-antigen polymerase; KEGG: cac:CAC2318 membrane protein of ExoQ family, involved in exopolysaccharide production; O-antigen polymerase 1186565 5292217 Cbei_0989 Clostridium beijerinckii NCIMB 8052 O-antigen polymerase YP_001308129.1 1185342 D 290402 CDS YP_001308130.1 150015876 5292218 1186622..1187272 1 NC_009617.1 PFAM: Formiminotransferase-cyclodeaminase; KEGG: cno:NT01CX_1802 formiminotransferase- cyclodeaminase/formiminotetrahydrofolate cyclodeaminase; formiminotransferase-cyclodeaminase 1187272 5292218 Cbei_0990 Clostridium beijerinckii NCIMB 8052 formiminotransferase-cyclodeaminase YP_001308130.1 1186622 D 290402 CDS YP_001308131.1 150015877 5292219 complement(1187348..1187500) 1 NC_009617.1 hypothetical protein 1187500 5292219 Cbei_0991 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308131.1 1187348 R 290402 CDS YP_001308132.1 150015878 5292220 1187743..1188240 1 NC_009617.1 hypothetical protein 1188240 5292220 Cbei_0992 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308132.1 1187743 D 290402 CDS YP_001308133.1 150015879 5292221 complement(1188496..1189383) 1 NC_009617.1 TIGRFAM: Delta-lactam-biosynthetic de-N-acetylase; PFAM: polysaccharide deacetylase; KEGG: cpr:CPR_1836 polysaccharide deacetylase (nodulation protein NodB); Delta-lactam-biosynthetic de-N-acetylase 1189383 5292221 Cbei_0993 Clostridium beijerinckii NCIMB 8052 Delta-lactam-biosynthetic de-N-acetylase YP_001308133.1 1188496 R 290402 CDS YP_001308134.1 150015880 5292222 1189944..1191041 1 NC_009617.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 1191041 5292222 Cbei_0994 Clostridium beijerinckii NCIMB 8052 GTP-dependent nucleic acid-binding protein EngD YP_001308134.1 1189944 D 290402 CDS YP_001308135.1 150015881 5292223 1191495..1193315 1 NC_009617.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ctc:CTC00543 hypothetical protein; hypothetical protein 1193315 5292223 Cbei_0995 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308135.1 1191495 D 290402 CDS YP_001308136.1 150015882 5292224 1193384..1194361 1 NC_009617.1 TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase, type I; KEGG: cpr:CPR_1205 mannose-6-phosphate isomerase, class I; mannose-6-phosphate isomerase 1194361 5292224 Cbei_0996 Clostridium beijerinckii NCIMB 8052 mannose-6-phosphate isomerase YP_001308136.1 1193384 D 290402 CDS YP_001308137.1 150015883 5292225 1194692..1195552 1 NC_009617.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 1195552 5292225 Cbei_0997 Clostridium beijerinckii NCIMB 8052 undecaprenyl pyrophosphate phosphatase YP_001308137.1 1194692 D 290402 CDS YP_001308138.1 150015884 5292226 1196228..1197325 1 NC_009617.1 PFAM: phosphofructokinase; KEGG: cpe:CPE1185 6-phosphofructokinase; 6-phosphofructokinase 1197325 5292226 Cbei_0998 Clostridium beijerinckii NCIMB 8052 6-phosphofructokinase YP_001308138.1 1196228 D 290402 CDS YP_001308139.1 150015885 5292227 1197420..1198196 1 NC_009617.1 KEGG: cpr:CPR_1202 beta-lactamase; beta-lactamase 1198196 5292227 Cbei_0999 Clostridium beijerinckii NCIMB 8052 beta-lactamase YP_001308139.1 1197420 D 290402 CDS YP_001308140.1 150015886 5292228 1198499..1199425 1 NC_009617.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 1199425 pyrB 5292228 pyrB Clostridium beijerinckii NCIMB 8052 aspartate carbamoyltransferase catalytic subunit YP_001308140.1 1198499 D 290402 CDS YP_001308141.1 150015887 5292229 1199427..1199858 1 NC_009617.1 involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase regulatory subunit 1199858 5292229 Cbei_1001 Clostridium beijerinckii NCIMB 8052 aspartate carbamoyltransferase regulatory subunit YP_001308141.1 1199427 D 290402 CDS YP_001308142.1 150015888 5292230 1199878..1201113 1 NC_009617.1 TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; KEGG: cpr:CPR_1200 dihydroorotase, multifunctional complex type; dihydroorotase 1201113 5292230 Cbei_1002 Clostridium beijerinckii NCIMB 8052 dihydroorotase YP_001308142.1 1199878 D 290402 CDS YP_001308143.1 150015889 5292231 1201509..1202381 1 NC_009617.1 type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 1202381 pyrF 5292231 pyrF Clostridium beijerinckii NCIMB 8052 orotidine 5'-phosphate decarboxylase YP_001308143.1 1201509 D 290402 CDS YP_001308144.1 150015890 5292232 1202417..1203160 1 NC_009617.1 responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+); dihydroorotate dehydrogenase electron transfer subunit 1203160 5292232 Cbei_1004 Clostridium beijerinckii NCIMB 8052 dihydroorotate dehydrogenase electron transfer subunit YP_001308144.1 1202417 D 290402 CDS YP_001308145.1 150015891 5292233 1203182..1204078 1 NC_009617.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B 1204078 5292233 Cbei_1005 Clostridium beijerinckii NCIMB 8052 dihydroorotate dehydrogenase 1B YP_001308145.1 1203182 D 290402 CDS YP_001308146.1 150015892 5292234 1204170..1204844 1 NC_009617.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 1204844 pyrE 5292234 pyrE Clostridium beijerinckii NCIMB 8052 orotate phosphoribosyltransferase YP_001308146.1 1204170 D 290402 CDS YP_001308147.1 150015893 5292235 1205539..1206300 1 NC_009617.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 1206300 5292235 Cbei_1007 Clostridium beijerinckii NCIMB 8052 stationary phase survival protein SurE YP_001308147.1 1205539 D 290402 CDS YP_001308148.1 150015894 5292236 complement(1206333..1207715) 1 NC_009617.1 KEGG: cpr:CPR_0627 hypothetical protein; hypothetical protein 1207715 5292236 Cbei_1008 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308148.1 1206333 R 290402 CDS YP_001308149.1 150015895 5292237 1208359..1210590 1 NC_009617.1 TIGRFAM: formate acetyltransferase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL; KEGG: cpr:CPR_1169 formate acetyltransferase; formate acetyltransferase 1210590 5292237 Cbei_1009 Clostridium beijerinckii NCIMB 8052 formate acetyltransferase YP_001308149.1 1208359 D 290402 CDS YP_001308150.1 150015896 5292238 1210933..1211658 1 NC_009617.1 TIGRFAM: pyruvate formate-lyase activating enzyme; PFAM: Radical SAM domain protein; KEGG: cpr:CPR_1170 pyruvate formate-lyase activating enzyme; pyruvate formate-lyase activating enzyme 1211658 5292238 Cbei_1010 Clostridium beijerinckii NCIMB 8052 pyruvate formate-lyase activating enzyme YP_001308150.1 1210933 D 290402 CDS YP_001308151.1 150015897 5292239 1212099..1214330 1 NC_009617.1 TIGRFAM: formate acetyltransferase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL; KEGG: cpr:CPR_1169 formate acetyltransferase; formate acetyltransferase 1214330 5292239 Cbei_1011 Clostridium beijerinckii NCIMB 8052 formate acetyltransferase YP_001308151.1 1212099 D 290402 CDS YP_001308152.1 150015898 5292240 complement(1214565..1214726) 1 NC_009617.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: cth:Cthe_2164 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 1214726 5292240 Cbei_1012 Clostridium beijerinckii NCIMB 8052 rubredoxin-type Fe(Cys)4 protein YP_001308152.1 1214565 R 290402 CDS YP_001308153.1 150015899 5292241 complement(1214887..1215516) 1 NC_009617.1 PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: cpf:CPF_1920 DNA polymerase III, epsilon subunit; exonuclease 1215516 5292241 Cbei_1013 Clostridium beijerinckii NCIMB 8052 exonuclease YP_001308153.1 1214887 R 290402 CDS YP_001308154.1 150015900 5292242 1215791..1216741 1 NC_009617.1 TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; KEGG: ctc:CTC01998 L-lactate dehydrogenase; L-lactate dehydrogenase 1216741 5292242 Cbei_1014 Clostridium beijerinckii NCIMB 8052 L-lactate dehydrogenase YP_001308154.1 1215791 D 290402 CDS YP_001308155.1 150015901 5292243 complement(1217500..1218471) 1 NC_009617.1 TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; Helix-turn-helix, type 11 domain protein; KEGG: cno:NT01CX_0898 BirA bifunctional protein; biotin--acetyl-CoA-carboxylase ligase 1218471 5292243 Cbei_1015 Clostridium beijerinckii NCIMB 8052 biotin--acetyl-CoA-carboxylase ligase YP_001308155.1 1217500 R 290402 CDS YP_001308156.1 150015902 5292244 1218621..1219691 1 NC_009617.1 KEGG: cpf:CPF_2255 hypothetical protein; hypothetical protein 1219691 5292244 Cbei_1016 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308156.1 1218621 D 290402 CDS YP_001308157.1 150015903 5292245 1219712..1220758 1 NC_009617.1 KEGG: ctc:CTC00792 hypothetical protein; hypothetical protein 1220758 5292245 Cbei_1017 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308157.1 1219712 D 290402 CDS YP_001308158.1 150015904 5292246 1221242..1221883 1 NC_009617.1 PFAM: peptidase M50; KEGG: ctc:CTC00793 protein with metal dependent protease domain; peptidase M50 1221883 5292246 Cbei_1018 Clostridium beijerinckii NCIMB 8052 peptidase M50 YP_001308158.1 1221242 D 290402 CDS YP_001308159.1 150015905 5292247 1222399..1224090 1 NC_009617.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1224090 argS 5292247 argS Clostridium beijerinckii NCIMB 8052 arginyl-tRNA synthetase YP_001308159.1 1222399 D 290402 CDS YP_001308160.1 150015906 5292248 1224308..1225453 1 NC_009617.1 PFAM: protein of unknown function UPF0118; KEGG: ctc:CTC01775 permease; hypothetical protein 1225453 5292248 Cbei_1020 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308160.1 1224308 D 290402 CDS YP_001308161.1 150015907 5292249 1225483..1226019 1 NC_009617.1 PFAM: nitroreductase; KEGG: cpr:CPR_0997 nitroreductase; nitroreductase 1226019 5292249 Cbei_1021 Clostridium beijerinckii NCIMB 8052 nitroreductase YP_001308161.1 1225483 D 290402 CDS YP_001308162.1 150015908 5292250 1226281..1227009 1 NC_009617.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: ctc:CTC00969 phosphoserine phosphatase; HAD family hydrolase 1227009 5292250 Cbei_1022 Clostridium beijerinckii NCIMB 8052 HAD family hydrolase YP_001308162.1 1226281 D 290402 CDS YP_001308163.1 150015909 5292251 1227024..1227773 1 NC_009617.1 KEGG: cno:NT01CX_1593 hypothetical protein; hypothetical protein 1227773 5292251 Cbei_1023 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308163.1 1227024 D 290402 CDS YP_001308164.1 150015910 5292252 complement(1227930..1228811) 1 NC_009617.1 PFAM: beta-lactamase domain protein; KEGG: cpe:CPE1657 probable late competence protein; beta-lactamase domain-containing protein 1228811 5292252 Cbei_1024 Clostridium beijerinckii NCIMB 8052 beta-lactamase domain-containing protein YP_001308164.1 1227930 R 290402 CDS YP_001308165.1 150015911 5292253 1229158..1230960 1 NC_009617.1 KEGG: cpe:CPE1656 hypothetical protein; hypothetical protein 1230960 5292253 Cbei_1025 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308165.1 1229158 D 290402 CDS YP_001308166.1 150015912 5292254 complement(1231155..1231913) 1 NC_009617.1 PFAM: protein of unknown function DUF1113; KEGG: cpf:CPF_1398 hypothetical protein; hypothetical protein 1231913 5292254 Cbei_1026 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308166.1 1231155 R 290402 CDS YP_001308167.1 150015913 5292255 complement(1232133..1232333) 1 NC_009617.1 PFAM: protein of unknown function DUF378; KEGG: cno:NT01CX_0131 hypothetical protein; hypothetical protein 1232333 5292255 Cbei_1027 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308167.1 1232133 R 290402 CDS YP_001308168.1 150015914 5292256 complement(1232408..1232878) 1 NC_009617.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: cpr:CPR_1625 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 1232878 5292256 Cbei_1028 Clostridium beijerinckii NCIMB 8052 AsnC family transcriptional regulator YP_001308168.1 1232408 R 290402 CDS YP_001308169.1 150015915 5292257 1233126..1233446 1 NC_009617.1 KEGG: cpf:CPF_1905 hypothetical protein; hypothetical protein 1233446 5292257 Cbei_1029 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308169.1 1233126 D 290402 CDS YP_001308170.1 150015916 5292258 complement(1233655..1234665) 1 NC_009617.1 KEGG: cpf:CPF_1904 hypothetical protein; hypothetical protein 1234665 5292258 Cbei_1030 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308170.1 1233655 R 290402 CDS YP_001308171.1 150015917 5292259 1234792..1235349 1 NC_009617.1 KEGG: tte:TTE1187 carbonic anhydrase/acetyltransferase, isoleucine patch superfamily; carbonic anhydrase 1235349 5292259 Cbei_1031 Clostridium beijerinckii NCIMB 8052 carbonic anhydrase YP_001308171.1 1234792 D 290402 CDS YP_001308172.1 150015918 5292260 1235558..1236394 1 NC_009617.1 SMART: RNA binding S1 domain protein; KEGG: cpe:CPE1650 hypothetical protein; RNA-binding S1 domain-containing protein 1236394 5292260 Cbei_1032 Clostridium beijerinckii NCIMB 8052 RNA-binding S1 domain-containing protein YP_001308172.1 1235558 D 290402 CDS YP_001308173.1 150015919 5292261 complement(1236450..1237865) 1 NC_009617.1 PFAM: GerA spore germination protein; KEGG: cpe:CPE0984 stage V sporulation protein AF; GerA spore germination protein 1237865 5292261 Cbei_1033 Clostridium beijerinckii NCIMB 8052 GerA spore germination protein YP_001308173.1 1236450 R 290402 CDS YP_001308174.1 150015920 5292262 1238543..1240387 1 NC_009617.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase; KEGG: btl:BALH_1017 asparagine synthetase, glutamine-hydrolyzing; asparagine synthase 1240387 5292262 Cbei_1034 Clostridium beijerinckii NCIMB 8052 asparagine synthase YP_001308174.1 1238543 D 290402 CDS YP_001308175.1 150015921 5292263 complement(1240528..1240830) 1 NC_009617.1 KEGG: cpr:CPR_0073 hypothetical protein; hypothetical protein 1240830 5292263 Cbei_1035 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308175.1 1240528 R 290402 CDS YP_001308176.1 150015922 5292264 complement(1240986..1243598) 1 NC_009617.1 TIGRFAM: ATPase P; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: cpf:CPF_1412 ATPase P; ATPase P 1243598 5292264 Cbei_1036 Clostridium beijerinckii NCIMB 8052 ATPase P YP_001308176.1 1240986 R 290402 CDS YP_001308177.1 150015923 5292265 1243915..1244334 1 NC_009617.1 PFAM: protein of unknown function DUF327; KEGG: ctc:CTC00667 hypothetical protein; hypothetical protein 1244334 5292265 Cbei_1037 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308177.1 1243915 D 290402 CDS YP_001308178.1 150015924 5292266 1245010..1246008 1 NC_009617.1 KEGG: cpe:CPE1487 sulfonate/nitrate transport system substrate-binding protein; sulfonate/nitrate transport system substrate-binding protein 1246008 5292266 Cbei_1038 Clostridium beijerinckii NCIMB 8052 sulfonate/nitrate transport system substrate-binding protein YP_001308178.1 1245010 D 290402 CDS YP_001308179.1 150015925 5292267 1245983..1246738 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpf:CPF_1737 ABC transporter permease; binding-protein-dependent transport system inner membrane protein 1246738 5292267 Cbei_1039 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001308179.1 1245983 D 290402 CDS YP_001308180.1 150015926 5292268 1246735..1247403 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpr:CPR_1464 nitrate ABC transporter ATP binding protein; ABC transporter 1247403 5292268 Cbei_1040 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001308180.1 1246735 D 290402 CDS YP_001308181.1 150015927 5292269 1247790..1249496 1 NC_009617.1 PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: cpr:CPR_2282 ABC transporter (ATP binding protein)-like protein lin0829; ABC transporter 1249496 5292269 Cbei_1041 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001308181.1 1247790 D 290402 CDS YP_001308182.1 150015928 5292270 complement(1249548..1249979) 1 NC_009617.1 hypothetical protein 1249979 5292270 Cbei_1042 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308182.1 1249548 R 290402 CDS YP_001308183.1 150015929 5292271 complement(1250410..1251438) 1 NC_009617.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 1251438 5292271 Cbei_1043 Clostridium beijerinckii NCIMB 8052 branched-chain amino acid aminotransferase YP_001308183.1 1250410 R 290402 CDS YP_001308184.1 150015930 5292272 complement(1251799..1253697) 1 NC_009617.1 TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD+ synthase; KEGG: cno:NT01CX_0103 glutamine-dependent NAD+ synthetase; NAD+ synthetase 1253697 5292272 Cbei_1044 Clostridium beijerinckii NCIMB 8052 NAD+ synthetase YP_001308184.1 1251799 R 290402 CDS YP_001308185.1 150015931 5292273 1254015..1254446 1 NC_009617.1 PFAM: protein of unknown function DUF107; KEGG: cac:CAC1051 uncharacterized conserved protein (possible membrane); hypothetical protein 1254446 5292273 Cbei_1045 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308185.1 1254015 D 290402 CDS YP_001308186.1 150015932 5292274 1254450..1255397 1 NC_009617.1 PFAM: band 7 protein; KEGG: cno:NT01CX_0101 SPFH domain/band 7 family protein; hypothetical protein 1255397 5292274 Cbei_1046 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308186.1 1254450 D 290402 CDS YP_001308187.1 150015933 5292275 1255762..1256580 1 NC_009617.1 KEGG: bcz:BCZK0960 EcsC-like protein; hypothetical protein 1256580 5292275 Cbei_1047 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308187.1 1255762 D 290402 CDS YP_001308188.1 150015934 5292276 1256690..1257205 1 NC_009617.1 KEGG: ddi:DDBDRAFT_0202921 hypothetical protein; hypothetical protein 1257205 5292276 Cbei_1048 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308188.1 1256690 D 290402 CDS YP_001308189.1 150015935 5292277 1257354..1258187 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 3; KEGG: cpe:CPE1324 probable amino acid ABC transporter; extracellular solute-binding protein 1258187 5292277 Cbei_1049 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001308189.1 1257354 D 290402 CDS YP_001308190.1 150015936 5292278 1258251..1258892 1 NC_009617.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpf:CPF_1532 amino acid ABC transporter permease, His/Glu/Gln/Arg/opine family; polar amino acid ABC transporter inner membrane subunit 1258892 5292278 Cbei_1050 Clostridium beijerinckii NCIMB 8052 polar amino acid ABC transporter inner membrane subunit YP_001308190.1 1258251 D 290402 CDS YP_001308191.1 150015937 5292279 1258908..1259594 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpe:CPE1326 probable amino acid ABC transporter; ABC transporter 1259594 5292279 Cbei_1051 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001308191.1 1258908 D 290402 CDS YP_001308192.1 150015938 5292280 1259861..1260028 1 NC_009617.1 KEGG: cno:NT01CX_0353 hypothetical protein; hypothetical protein 1260028 5292280 Cbei_1052 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308192.1 1259861 D 290402 CDS YP_001308193.1 150015939 5292281 1260536..1264279 1 NC_009617.1 TIGRFAM: phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein; KEGG: cpf:CPF_0671 phosphoribosylformylglycinamidine synthase; phosphoribosylformylglycinamidine synthase 1264279 5292281 Cbei_1053 Clostridium beijerinckii NCIMB 8052 phosphoribosylformylglycinamidine synthase YP_001308193.1 1260536 D 290402 CDS YP_001308194.1 150015940 5292282 1264677..1265156 1 NC_009617.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: cpr:CPR_0670 phosphoribosylaminoimidazole carboxylase, catalytic subunit; phosphoribosylaminoimidazole carboxylase catalytic subunit 1265156 5292282 Cbei_1054 Clostridium beijerinckii NCIMB 8052 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_001308194.1 1264677 D 290402 CDS YP_001308195.1 150015941 5292283 1265156..1265863 1 NC_009617.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 1265863 5292283 Cbei_1055 Clostridium beijerinckii NCIMB 8052 phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_001308195.1 1265156 D 290402 CDS YP_001308196.1 150015942 5292284 1266119..1267534 1 NC_009617.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 1267534 5292284 Cbei_1056 Clostridium beijerinckii NCIMB 8052 amidophosphoribosyltransferase YP_001308196.1 1266119 D 290402 CDS YP_001308197.1 150015943 5292285 1267604..1268605 1 NC_009617.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1268605 5292285 Cbei_1057 Clostridium beijerinckii NCIMB 8052 phosphoribosylaminoimidazole synthetase YP_001308197.1 1267604 D 290402 CDS YP_001308198.1 150015944 5292286 1268593..1269204 1 NC_009617.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: cpr:CPR_0674 phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase 1269204 5292286 Cbei_1058 Clostridium beijerinckii NCIMB 8052 phosphoribosylglycinamide formyltransferase YP_001308198.1 1268593 D 290402 CDS YP_001308199.1 150015945 5292287 1269218..1270726 1 NC_009617.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1270726 purH 5292287 purH Clostridium beijerinckii NCIMB 8052 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_001308199.1 1269218 D 290402 CDS YP_001308200.1 150015946 5292288 1271142..1272392 1 NC_009617.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 1272392 5292288 Cbei_1060 Clostridium beijerinckii NCIMB 8052 phosphoribosylamine--glycine ligase YP_001308200.1 1271142 D 290402 CDS YP_001308201.1 150015947 5292289 1272787..1273089 1 NC_009617.1 KEGG: ddi:DDBDRAFT_0218157 hypothetical protein; hypothetical protein 1273089 5292289 Cbei_1061 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308201.1 1272787 D 290402 CDS YP_001308202.1 150015948 5292290 1273638..1274006 1 NC_009617.1 PFAM: Penicillinase repressor; KEGG: tte:TTE1078 predicted transcriptional regulator; CopY family transcriptional regulator 1274006 5292290 Cbei_1062 Clostridium beijerinckii NCIMB 8052 CopY family transcriptional regulator YP_001308202.1 1273638 D 290402 CDS YP_001308203.1 150015949 5292291 1274011..1276320 1 NC_009617.1 PFAM: peptidase M56, BlaR1; KEGG: dsy:DSY3484 hypothetical protein; peptidase M56, BlaR1 1276320 5292291 Cbei_1063 Clostridium beijerinckii NCIMB 8052 peptidase M56, BlaR1 YP_001308203.1 1274011 D 290402 CDS YP_001308204.1 150015950 5292292 1276565..1277488 1 NC_009617.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cno:NT01CX_2328 conserved protein, tetratricopeptide repeat family protein; hypothetical protein 1277488 5292292 Cbei_1064 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308204.1 1276565 D 290402 CDS YP_001308205.1 150015951 5292293 1278185..1278718 1 NC_009617.1 KEGG: cpf:CPF_1041 hypothetical protein; hypothetical protein 1278718 5292293 Cbei_1065 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308205.1 1278185 D 290402 CDS YP_001308206.1 150015952 5292294 complement(1279012..1279623) 1 NC_009617.1 hypothetical protein 1279623 5292294 Cbei_1066 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308206.1 1279012 R 290402 CDS YP_001308207.1 150015953 5292295 1280118..1280567 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: ctc:CTC00126 transcriptional regulator, marR family; MarR family transcriptional regulator 1280567 5292295 Cbei_1067 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001308207.1 1280118 D 290402 CDS YP_001308208.1 150015954 5292296 1280582..1281553 1 NC_009617.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: cac:CAC3578 3-oxoacyl-[acyl-carrier-protein] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 1281553 5292296 Cbei_1068 Clostridium beijerinckii NCIMB 8052 3-oxoacyl-(acyl-carrier-protein) synthase III YP_001308208.1 1280582 D 290402 CDS YP_001308209.1 150015955 5292297 1281908..1282849 1 NC_009617.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: cac:CAC3576 dioxygenase related to 2-nitropropane dioxygenase; 2-nitropropane dioxygenase 1282849 5292297 Cbei_1069 Clostridium beijerinckii NCIMB 8052 2-nitropropane dioxygenase YP_001308209.1 1281908 D 290402 CDS YP_001308210.1 150015956 5292298 1282842..1283786 1 NC_009617.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: cpf:CPF_1325 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 1283786 5292298 Cbei_1070 Clostridium beijerinckii NCIMB 8052 malonyl CoA-acyl carrier protein transacylase YP_001308210.1 1282842 D 290402 CDS YP_001308211.1 150015957 5292299 1283985..1284725 1 NC_009617.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1284725 fabG 5292299 fabG Clostridium beijerinckii NCIMB 8052 3-ketoacyl-ACP reductase YP_001308211.1 1283985 D 290402 CDS YP_001308212.1 150015958 5292300 1284743..1285978 1 NC_009617.1 PFAM: Beta-ketoacyl synthase-like; KEGG: cpr:CPR_1139 3-oxoacyl-[acyl-carrier-protein] synthase II; beta-ketoacyl synthase-like protein 1285978 5292300 Cbei_1072 Clostridium beijerinckii NCIMB 8052 beta-ketoacyl synthase-like protein YP_001308212.1 1284743 D 290402 CDS YP_001308213.1 150015959 5292301 1286343..1286858 1 NC_009617.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: cpf:CPF_1328 acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1286858 5292301 Cbei_1073 Clostridium beijerinckii NCIMB 8052 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_001308213.1 1286343 D 290402 CDS YP_001308214.1 150015960 5292302 1286862..1287290 1 NC_009617.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1287290 fabZ 5292302 fabZ Clostridium beijerinckii NCIMB 8052 (3R)-hydroxymyristoyl-ACP dehydratase YP_001308214.1 1286862 D 290402 CDS YP_001308215.1 150015961 5292303 1287305..1288657 1 NC_009617.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: cpe:CPE1074 acetyl-CoA carboxylase; biotin carboxylase 1288657 5292303 Cbei_1075 Clostridium beijerinckii NCIMB 8052 biotin carboxylase YP_001308215.1 1287305 D 290402 CDS YP_001308216.1 150015962 5292304 1288650..1289513 1 NC_009617.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: cpr:CPR_1143 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta 1289513 5292304 Cbei_1076 Clostridium beijerinckii NCIMB 8052 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_001308216.1 1288650 D 290402 CDS YP_001308217.1 150015963 5292305 1289516..1290334 1 NC_009617.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 1290334 5292305 Cbei_1077 Clostridium beijerinckii NCIMB 8052 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_001308217.1 1289516 D 290402 CDS YP_001308218.1 150015964 5292306 1290540..1290953 1 NC_009617.1 PFAM: HutP; KEGG: ctc:CTC01329 hypothetical protein; HutP protein 1290953 5292306 Cbei_1078 Clostridium beijerinckii NCIMB 8052 HutP protein YP_001308218.1 1290540 D 290402 CDS YP_001308219.1 150015965 5292307 1291610..1292626 1 NC_009617.1 PFAM: protein of unknown function DUF534; KEGG: swo:Swol_0325 hypothetical protein; hypothetical protein 1292626 5292307 Cbei_1079 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308219.1 1291610 D 290402 CDS YP_001308220.1 150015966 5292308 1292626..1293528 1 NC_009617.1 PFAM: inner-membrane translocator; KEGG: fnu:FN2080 ABC transporter integral membrane protein; inner-membrane translocator 1293528 5292308 Cbei_1080 Clostridium beijerinckii NCIMB 8052 inner-membrane translocator YP_001308220.1 1292626 D 290402 CDS YP_001308221.1 150015967 5292309 1293494..1294288 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: fnu:FN2079 ABC transporter ATP-binding protein; ABC transporter 1294288 5292309 Cbei_1081 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001308221.1 1293494 D 290402 CDS YP_001308222.1 150015968 5292310 1294796..1294918 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_1737 autolysin/N-acetylmuramoyl-L-alanine amidase; cell wall binding repeat-containing protein 1294918 5292310 Cbei_1082 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001308222.1 1294796 D 290402 CDS YP_001308223.1 150015969 5292311 1295074..1295916 1 NC_009617.1 PFAM: Ig domain protein, group 2 domain protein; KEGG: cth:Cthe_0056 Ig-like, group 2; Ig domain-containing protein 1295916 5292311 Cbei_1083 Clostridium beijerinckii NCIMB 8052 Ig domain-containing protein YP_001308223.1 1295074 D 290402 CDS YP_001308224.1 150015970 5296335 1296792..1297841 1 NC_009617.1 KEGG: cpe:CPE1341 probable galactoside ABC transporter; galactoside ABC transporter 1297841 5296335 Cbei_1085 Clostridium beijerinckii NCIMB 8052 galactoside ABC transporter YP_001308224.1 1296792 D 290402 CDS YP_001308225.1 150015971 5292313 complement(1297875..1298408) 1 NC_009617.1 KEGG: sce:YDL035C Plasma membrane G protein coupled receptor (GPCR) that interacts with the heterotrimeric G protein alpha subunit, Gpa2p, and with Plc1p; sensor that integrates nutritional signals with the modulation of cell fate via PKA and cAMP synthesis; hypothetical protein 1298408 5292313 Cbei_1086 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308225.1 1297875 R 290402 CDS YP_001308226.1 150015972 5292314 1299274..1301175 1 NC_009617.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: aba:Acid345_4523 diguanylate cyclase with GAF sensor; diguanylate cyclase 1301175 5292314 Cbei_1087 Clostridium beijerinckii NCIMB 8052 diguanylate cyclase YP_001308226.1 1299274 D 290402 CDS YP_001308227.1 150015973 5292315 1301741..1303339 1 NC_009617.1 PFAM: membrane bound O-acyl transferase, MBOAT family protein; KEGG: cno:NT01CX_1554 alginate O-acetylation protein; membrane bound O-acyl transferase, MBOAT family protein 1303339 5292315 Cbei_1088 Clostridium beijerinckii NCIMB 8052 membrane bound O-acyl transferase, MBOAT family protein YP_001308227.1 1301741 D 290402 CDS YP_001308228.1 150015974 5292316 1303371..1304672 1 NC_009617.1 KEGG: fnu:FN1671 ABC transporter ATP-binding protein; hypothetical protein 1304672 5292316 Cbei_1089 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308228.1 1303371 D 290402 CDS YP_001308229.1 150015975 5292317 1304733..1306244 1 NC_009617.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cff:CFF8240_1466 amino acid adenylation domain protein; AMP-dependent synthetase and ligase 1306244 5292317 Cbei_1090 Clostridium beijerinckii NCIMB 8052 AMP-dependent synthetase and ligase YP_001308229.1 1304733 D 290402 CDS YP_001308230.1 150015976 5292318 1306623..1306850 1 NC_009617.1 hypothetical protein 1306850 5292318 Cbei_1091 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308230.1 1306623 D 290402 CDS YP_001308231.1 150015977 5292319 1307083..1307577 1 NC_009617.1 PFAM: VanZ family protein; KEGG: cac:CAC3074 hypothetical protein; VanZ family protein 1307577 5292319 Cbei_1092 Clostridium beijerinckii NCIMB 8052 VanZ family protein YP_001308231.1 1307083 D 290402 CDS YP_001308232.1 150015978 5292320 1307671..1308204 1 NC_009617.1 KEGG: dsy:DSY3434 hypothetical protein; hypothetical protein 1308204 5292320 Cbei_1093 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308232.1 1307671 D 290402 CDS YP_001308233.1 150015979 5296336 1309026..1309202 1 NC_009617.1 hypothetical protein 1309202 5296336 Cbei_1095 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308233.1 1309026 D 290402 CDS YP_001308234.1 150015980 5292322 1309845..1311089 1 NC_009617.1 PFAM: ATPase AAA, central domain protein; SMART: ATPase AAA; KEGG: cpr:CPR_1757 ATPase, AAA family; recombination factor protein RarA 1311089 5292322 Cbei_1096 Clostridium beijerinckii NCIMB 8052 recombination factor protein RarA YP_001308234.1 1309845 D 290402 CDS YP_001308235.1 150015981 5292323 1311212..1311664 1 NC_009617.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: cpr:CPR_1756 uncharacterized conserved protein of YjeB/RRF2 family; BadM/Rrf2 family transcriptional regulator 1311664 5292323 Cbei_1097 Clostridium beijerinckii NCIMB 8052 BadM/Rrf2 family transcriptional regulator YP_001308235.1 1311212 D 290402 CDS YP_001308236.1 150015982 5292324 1311667..1312848 1 NC_009617.1 PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cpr:CPR_1755 cysteine desulfurase; class V aminotransferase 1312848 5292324 Cbei_1098 Clostridium beijerinckii NCIMB 8052 class V aminotransferase YP_001308236.1 1311667 D 290402 CDS YP_001308237.1 150015983 5292325 1312850..1313287 1 NC_009617.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: cpr:CPR_1754 NifU protein; NifU domain-containing protein 1313287 5292325 Cbei_1099 Clostridium beijerinckii NCIMB 8052 NifU domain-containing protein YP_001308237.1 1312850 D 290402 CDS YP_001308238.1 150015984 5292326 1313299..1314375 1 NC_009617.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 1314375 mnmA 5292326 mnmA Clostridium beijerinckii NCIMB 8052 tRNA-specific 2-thiouridylase MnmA YP_001308238.1 1313299 D 290402 CDS YP_001308239.1 150015985 5292327 1314768..1315064 1 NC_009617.1 KEGG: ddi:DDBDRAFT_0218157 hypothetical protein; hypothetical protein 1315064 5292327 Cbei_1101 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308239.1 1314768 D 290402 CDS YP_001308240.1 150015986 5292328 1315667..1316167 1 NC_009617.1 PFAM: PRC-barrel domain protein; KEGG: cpr:CPR_1752 PRC-barrel domain protein; PRC-barrel domain-containing protein 1316167 5292328 Cbei_1102 Clostridium beijerinckii NCIMB 8052 PRC-barrel domain-containing protein YP_001308240.1 1315667 D 290402 CDS YP_001308241.1 150015987 5292329 1316148..1317176 1 NC_009617.1 PFAM: protein of unknown function UPF0118; KEGG: cpe:CPE1781 hypothetical protein; hypothetical protein 1317176 5292329 Cbei_1103 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308241.1 1316148 D 290402 CDS YP_001308242.1 150015988 5292330 1318143..1320782 1 NC_009617.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1320782 alaS 5292330 alaS Clostridium beijerinckii NCIMB 8052 alanyl-tRNA synthetase YP_001308242.1 1318143 D 290402 CDS YP_001308243.1 150015989 5292331 1320919..1321176 1 NC_009617.1 PFAM: protein of unknown function DUF965; KEGG: cpr:CPR_1749 hypothetical protein; hypothetical protein 1321176 5292331 Cbei_1105 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308243.1 1320919 D 290402 CDS YP_001308244.1 150015990 5292332 1321285..1321701 1 NC_009617.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 1321701 5292332 Cbei_1106 Clostridium beijerinckii NCIMB 8052 Holliday junction resolvase-like protein YP_001308244.1 1321285 D 290402 CDS YP_001308245.1 150015991 5292333 1321910..1322188 1 NC_009617.1 PFAM: protein of unknown function DUF1292; KEGG: cno:NT01CX_2277 hypothetical protein; hypothetical protein 1322188 5292333 Cbei_1107 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308245.1 1321910 D 290402 CDS YP_001308246.1 150015992 5292334 1322274..1322738 1 NC_009617.1 PFAM: ferric-uptake regulator; KEGG: cpf:CPF_2029 transcriptional regulator, Fur family; ferric uptake regulator family protein 1322738 5292334 Cbei_1108 Clostridium beijerinckii NCIMB 8052 ferric uptake regulator family protein YP_001308246.1 1322274 D 290402 CDS YP_001308247.1 150015993 5292335 1323102..1324769 1 NC_009617.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: cpf:CPF_2028 RNA-metabolising metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 1324769 5292335 Cbei_1109 Clostridium beijerinckii NCIMB 8052 beta-lactamase domain-containing protein YP_001308247.1 1323102 D 290402 CDS YP_001308248.1 150015994 5292336 1325169..1326995 1 NC_009617.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: cpe:CPE1774 probable GTP-binding protein; GTP-binding protein TypA 1326995 5292336 Cbei_1110 Clostridium beijerinckii NCIMB 8052 GTP-binding protein TypA YP_001308248.1 1325169 D 290402 CDS YP_001308249.1 150015995 5292337 1327104..1328129 1 NC_009617.1 PFAM: aminodeoxychorismate lyase; KEGG: cpe:CPE1773 conserved hypothetical protein; aminodeoxychorismate lyase 1328129 5292337 Cbei_1111 Clostridium beijerinckii NCIMB 8052 aminodeoxychorismate lyase YP_001308249.1 1327104 D 290402 CDS YP_001308250.1 150015996 5292338 1328410..1329054 1 NC_009617.1 PFAM: O-methyltransferase, family 3; KEGG: cpf:CPF_2025 O-methyltransferase family protein; O-methyltransferase family protein 1329054 5292338 Cbei_1112 Clostridium beijerinckii NCIMB 8052 O-methyltransferase family protein YP_001308250.1 1328410 D 290402 CDS YP_001308251.1 150015997 5292339 1329061..1330281 1 NC_009617.1 PFAM: peptidase U32; KEGG: cpf:CPF_2024 peptidase, U32 family; peptidase U32 1330281 5292339 Cbei_1113 Clostridium beijerinckii NCIMB 8052 peptidase U32 YP_001308251.1 1329061 D 290402 CDS YP_001308252.1 150015998 5292340 1330782..1332398 1 NC_009617.1 PFAM: penicillin-binding protein, transpeptidase; KEGG: cpf:CPF_2022 penicillin-binding protein; penicillin-binding protein, transpeptidase 1332398 5292340 Cbei_1114 Clostridium beijerinckii NCIMB 8052 penicillin-binding protein, transpeptidase YP_001308252.1 1330782 D 290402 CDS YP_001308253.1 150015999 5292341 1332708..1333406 1 NC_009617.1 sigma-28; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell after engulfment; sporulation sigma factor SigK 1333406 5292341 Cbei_1115 Clostridium beijerinckii NCIMB 8052 sporulation sigma factor SigK YP_001308253.1 1332708 D 290402 CDS YP_001308254.1 150016000 5292342 1333666..1334697 1 NC_009617.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: ATPase AAA; KEGG: ctc:CTC01119 pili retraction protein pilT; twitching motility protein 1334697 5292342 Cbei_1116 Clostridium beijerinckii NCIMB 8052 twitching motility protein YP_001308254.1 1333666 D 290402 CDS YP_001308255.1 150016001 5292343 1334798..1336051 1 NC_009617.1 PFAM: cell division protein FtsA; KEGG: cpf:CPF_2019 cell division protein FtsA; cell division protein FtsA 1336051 5292343 Cbei_1117 Clostridium beijerinckii NCIMB 8052 cell division protein FtsA YP_001308255.1 1334798 D 290402 CDS YP_001308256.1 150016002 5292344 1336066..1337205 1 NC_009617.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ, GTPase; Tubulin/FtsZ domain protein; KEGG: cpf:CPF_2018 cell division protein FtsZ; cell division protein FtsZ 1337205 5292344 Cbei_1118 Clostridium beijerinckii NCIMB 8052 cell division protein FtsZ YP_001308256.1 1336066 D 290402 CDS YP_001308257.1 150016003 5292345 1337701..1338591 1 NC_009617.1 PFAM: peptidase U4, sporulation factor SpoIIGA; KEGG: cpr:CPR_1734 sporulation factor SpoIIGA; peptidase U4, sporulation factor SpoIIGA 1338591 5292345 Cbei_1119 Clostridium beijerinckii NCIMB 8052 peptidase U4, sporulation factor SpoIIGA YP_001308257.1 1337701 D 290402 CDS YP_001308258.1 150016004 5292346 1338566..1339273 1 NC_009617.1 sigma-29; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell at the onset of sporulation; sporulation sigma factor SigE 1339273 5292346 Cbei_1120 Clostridium beijerinckii NCIMB 8052 sporulation sigma factor SigE YP_001308258.1 1338566 D 290402 CDS YP_001308259.1 150016005 5292347 1339356..1340129 1 NC_009617.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed after engulfment; this factor is involved in the transcription of small acid-soluble proteins involved in protecting the forespore chromatin; sporulation sigma factor SigG 1340129 5292347 Cbei_1121 Clostridium beijerinckii NCIMB 8052 sporulation sigma factor SigG YP_001308259.1 1339356 D 290402 CDS YP_001308260.1 150016006 5292348 1340170..1340439 1 NC_009617.1 TIGRFAM: Sporulation protein YlmC/YmxH; PFAM: PRC-barrel domain protein; KEGG: cpr:CPR_1731 PRC-barrel domain; sporulation protein YlmC/YmxH 1340439 5292348 Cbei_1122 Clostridium beijerinckii NCIMB 8052 sporulation protein YlmC/YmxH YP_001308260.1 1340170 D 290402 CDS YP_001308261.1 150016007 5292349 1340510..1340959 1 NC_009617.1 PFAM: ATP-cone domain protein; KEGG: cpr:CPR_1730 transcriptional regulator, NrdR family; transcriptional regulator NrdR 1340959 nrdR 5292349 nrdR Clostridium beijerinckii NCIMB 8052 transcriptional regulator NrdR YP_001308261.1 1340510 D 290402 CDS YP_001308262.1 150016008 5292350 1341224..1341964 1 NC_009617.1 PFAM: protein of unknown function DUF152; KEGG: cno:NT01CX_2256 hypothetical protein; hypothetical protein 1341964 5292350 Cbei_1124 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308262.1 1341224 D 290402 CDS YP_001308263.1 150016009 5292351 1341980..1342681 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ctc:CTC01130 transcriptional regulatory protein; two component transcriptional regulator 1342681 5292351 Cbei_1125 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001308263.1 1341980 D 290402 CDS YP_001308264.1 150016010 5292352 1342684..1344390 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cac:CAC1701 sensory histidine kinase (with HAMP and PAS domains); multi-sensor signal transduction histidine kinase 1344390 5292352 Cbei_1126 Clostridium beijerinckii NCIMB 8052 multi-sensor signal transduction histidine kinase YP_001308264.1 1342684 D 290402 CDS YP_001308265.1 150016011 5292353 1344593..1345501 1 NC_009617.1 TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: cac:CAC1705 periplasmic phosphate-binding protein; phosphate binding protein 1345501 5292353 Cbei_1127 Clostridium beijerinckii NCIMB 8052 phosphate binding protein YP_001308265.1 1344593 D 290402 CDS YP_001308266.1 150016012 5292354 1345525..1346418 1 NC_009617.1 TIGRFAM: phosphate ABC transporter inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CAC1706 phosphate permease; phosphate ABC transporter permease 1346418 5292354 Cbei_1128 Clostridium beijerinckii NCIMB 8052 phosphate ABC transporter permease YP_001308266.1 1345525 D 290402 CDS YP_001308267.1 150016013 5292355 1346418..1347302 1 NC_009617.1 TIGRFAM: phosphate ABC transporter inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CAC1707 permease component of ATP-dependent phosphate uptake system; phosphate ABC transporter permease 1347302 5292355 Cbei_1129 Clostridium beijerinckii NCIMB 8052 phosphate ABC transporter permease YP_001308267.1 1346418 D 290402 CDS YP_001308268.1 150016014 5292356 1347312..1348061 1 NC_009617.1 TIGRFAM: phosphate ABC transporter ATPase subunit; PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC1708 ATPase component of ABC-type phosphate transport system; phosphate ABC transporter ATPase 1348061 5292356 Cbei_1130 Clostridium beijerinckii NCIMB 8052 phosphate ABC transporter ATPase YP_001308268.1 1347312 D 290402 CDS YP_001308269.1 150016015 5292357 1348080..1348742 1 NC_009617.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: cac:CAC1709 phosphate uptake regulator; phosphate uptake regulator PhoU 1348742 5292357 Cbei_1131 Clostridium beijerinckii NCIMB 8052 phosphate uptake regulator PhoU YP_001308269.1 1348080 D 290402 CDS YP_001308270.1 150016016 5292358 1349087..1349749 1 NC_009617.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: cac:CAC1709 phosphate uptake regulator; phosphate uptake regulator PhoU 1349749 5292358 Cbei_1132 Clostridium beijerinckii NCIMB 8052 phosphate uptake regulator PhoU YP_001308270.1 1349087 D 290402 CDS YP_001308271.1 150016017 5292359 1349988..1351322 1 NC_009617.1 PFAM: protein of unknown function DUF512; KEGG: cpf:CPF_2009 hypothetical protein; hypothetical protein 1351322 5292359 Cbei_1133 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308271.1 1349988 D 290402 CDS YP_001308272.1 150016018 5292360 1351381..1352697 1 NC_009617.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1352697 engA 5292360 engA Clostridium beijerinckii NCIMB 8052 GTP-binding protein EngA YP_001308272.1 1351381 D 290402 CDS YP_001308273.1 150016019 5292361 1352700..1353692 1 NC_009617.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1353692 gpsA 5292361 gpsA Clostridium beijerinckii NCIMB 8052 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_001308273.1 1352700 D 290402 CDS YP_001308274.1 150016020 5292362 1354203..1355681 1 NC_009617.1 TIGRFAM: Sporulation stage IV, protein A; KEGG: cpr:CPR_1724 stage IV sporulation protein A; sporulation stage IV, protein A 1355681 5292362 Cbei_1136 Clostridium beijerinckii NCIMB 8052 sporulation stage IV, protein A YP_001308274.1 1354203 D 290402 CDS YP_001308275.1 150016021 5292363 1356122..1356547 1 NC_009617.1 hypothetical protein 1356547 5292363 Cbei_1137 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308275.1 1356122 D 290402 CDS YP_001308276.1 150016022 5292364 complement(1356834..1357652) 1 NC_009617.1 KEGG: lma:LmjF15.0440 hypothetical protein, unknown function; hypothetical protein 1357652 5292364 Cbei_1138 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308276.1 1356834 R 290402 CDS YP_001308277.1 150016023 5292365 1358228..1359109 1 NC_009617.1 PFAM: YicC N-terminal domain protein; domain of unknown function DUF1732; KEGG: cpf:CPF_2003 conserved hypothetical protein TIGR00255; hypothetical protein 1359109 5292365 Cbei_1139 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308277.1 1358228 D 290402 CDS YP_001308278.1 150016024 5292366 1359124..1359396 1 NC_009617.1 PFAM: protein of unknown function DUF370; KEGG: cno:NT01CX_2250 hypothetical UPF0296 protein; hypothetical protein 1359396 5292366 Cbei_1140 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308278.1 1359124 D 290402 CDS YP_001308279.1 150016025 5292367 1359396..1360034 1 NC_009617.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 1360034 gmk 5292367 gmk Clostridium beijerinckii NCIMB 8052 guanylate kinase YP_001308279.1 1359396 D 290402 CDS YP_001308280.1 150016026 5292368 1360015..1360233 1 NC_009617.1 Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 1360233 rpoZ 5292368 rpoZ Clostridium beijerinckii NCIMB 8052 DNA-directed RNA polymerase subunit omega YP_001308280.1 1360015 D 290402 CDS YP_001308281.1 150016027 5292369 1360235..1361419 1 NC_009617.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 1361419 5292369 Cbei_1143 Clostridium beijerinckii NCIMB 8052 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_001308281.1 1360235 D 290402 CDS YP_001308282.1 150016028 5292370 1361600..1363798 1 NC_009617.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 1363798 5292370 Cbei_1144 Clostridium beijerinckii NCIMB 8052 primosome assembly protein PriA YP_001308282.1 1361600 D 290402 CDS YP_001308283.1 150016029 5292371 1363811..1364269 1 NC_009617.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1364269 def 5292371 def Clostridium beijerinckii NCIMB 8052 peptide deformylase YP_001308283.1 1363811 D 290402 CDS YP_001308284.1 150016030 5292372 1364292..1365218 1 NC_009617.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 1365218 fmt 5292372 fmt Clostridium beijerinckii NCIMB 8052 methionyl-tRNA formyltransferase YP_001308284.1 1364292 D 290402 CDS YP_001308285.1 150016031 5292373 1365234..1365926 1 NC_009617.1 PFAM: peptidase, membrane zinc metallopeptidase, KEGG: cno:NT01CX_2243 hypothetical protein; peptidase, membrane zinc metallopeptidase 1365926 5292373 Cbei_1147 Clostridium beijerinckii NCIMB 8052 peptidase, membrane zinc metallopeptidase YP_001308285.1 1365234 D 290402 CDS YP_001308286.1 150016032 5292374 1365941..1367260 1 NC_009617.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: cpr:CPR_1712 sun protein; sun protein 1367260 5292374 Cbei_1148 Clostridium beijerinckii NCIMB 8052 sun protein YP_001308286.1 1365941 D 290402 CDS YP_001308287.1 150016033 5292375 1367272..1368333 1 NC_009617.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 1368333 5292375 Cbei_1149 Clostridium beijerinckii NCIMB 8052 ribosomal RNA large subunit methyltransferase N YP_001308287.1 1367272 D 290402 CDS YP_001308288.1 150016034 5292376 1368317..1369036 1 NC_009617.1 PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: cpf:CPF_1992 protein phosphatase 2C family protein; protein phosphatase 2C-like protein 1369036 5292376 Cbei_1150 Clostridium beijerinckii NCIMB 8052 protein phosphatase 2C-like protein YP_001308288.1 1368317 D 290402 CDS YP_001308289.1 150016035 5292377 1369038..1370984 1 NC_009617.1 PFAM: protein kinase; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; KEGG: cpe:CPE1738 pobable serine/threonine protein kinase; protein kinase 1370984 5292377 Cbei_1151 Clostridium beijerinckii NCIMB 8052 protein kinase YP_001308289.1 1369038 D 290402 CDS YP_001308290.1 150016036 5292378 1371352..1372224 1 NC_009617.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 1372224 5292378 Cbei_1152 Clostridium beijerinckii NCIMB 8052 ribosome-associated GTPase YP_001308290.1 1371352 D 290402 CDS YP_001308291.1 150016037 5292379 1372218..1372862 1 NC_009617.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 1372862 5292379 Cbei_1153 Clostridium beijerinckii NCIMB 8052 ribulose-phosphate 3-epimerase YP_001308291.1 1372218 D 290402 CDS YP_001308292.1 150016038 5292380 1372867..1373502 1 NC_009617.1 TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase, catalytic region; KEGG: cac:CAC1731 predicted nucleotide-binding protein, YLOS B.subtilis ortholog; thiamine pyrophosphokinase 1373502 5292380 Cbei_1154 Clostridium beijerinckii NCIMB 8052 thiamine pyrophosphokinase YP_001308292.1 1372867 D 290402 CDS YP_001308293.1 150016039 5292381 complement(1373993..1374184) 1 NC_009617.1 required for 70S ribosome assembly; 50S ribosomal protein L28 1374184 rpmB 5292381 rpmB Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L28 YP_001308293.1 1373993 R 290402 CDS YP_001308294.1 150016040 5292382 1375261..1375611 1 NC_009617.1 PFAM: protein of unknown function DUF322; KEGG: cpr:CPR_1704 hypothetical protein; hypothetical protein 1375611 5292382 Cbei_1156 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308294.1 1375261 D 290402 CDS YP_001308295.1 150016041 5292383 1375625..1377265 1 NC_009617.1 PFAM: Dak phosphatase; KEGG: cpe:CPE1732 conserved hypothetical protein; Dak phosphatase 1377265 5292383 Cbei_1157 Clostridium beijerinckii NCIMB 8052 Dak phosphatase YP_001308295.1 1375625 D 290402 CDS YP_001308296.1 150016042 5292384 1377326..1379359 1 NC_009617.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1379359 5292384 Cbei_1158 Clostridium beijerinckii NCIMB 8052 ATP-dependent DNA helicase RecG YP_001308296.1 1377326 D 290402 CDS YP_001308297.1 150016043 5292385 1379664..1380221 1 NC_009617.1 TIGRFAM: methyltransferase; PFAM: conserved hypothetical protein 95; KEGG: cpf:CPF_1983 methyltransferase; methyltransferase 1380221 5292385 Cbei_1159 Clostridium beijerinckii NCIMB 8052 methyltransferase YP_001308297.1 1379664 D 290402 CDS YP_001308298.1 150016044 5292386 1380225..1380704 1 NC_009617.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain; PFAM: cytidylyltransferase; KEGG: cno:NT01CX_2230 pantetheine-phosphate adenylyltransferase; pantetheine-phosphate adenylyltransferase 1380704 5292386 Cbei_1160 Clostridium beijerinckii NCIMB 8052 pantetheine-phosphate adenylyltransferase YP_001308298.1 1380225 D 290402 CDS YP_001308299.1 150016045 5292387 1380879..1381421 1 NC_009617.1 KEGG: cpf:CPF_1980 hypothetical protein; hypothetical protein 1381421 5292387 Cbei_1161 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308299.1 1380879 D 290402 CDS YP_001308300.1 150016046 5292388 complement(1381401..1382582) 1 NC_009617.1 TIGRFAM: Sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein; KEGG: cpr:CPR_1699 uncharacterized membrane protein; sporulation integral membrane protein YlbJ 1382582 5292388 Cbei_1162 Clostridium beijerinckii NCIMB 8052 sporulation integral membrane protein YlbJ YP_001308300.1 1381401 R 290402 CDS YP_001308301.1 150016047 5292389 complement(1382635..1383840) 1 NC_009617.1 PFAM: protein of unknown function DUF795; KEGG: cno:NT01CX_2226 hypothetical protein; hypothetical protein 1383840 5292389 Cbei_1163 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308301.1 1382635 R 290402 CDS YP_001308302.1 150016048 5292390 1384403..1385404 1 NC_009617.1 in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; phosphotransacetylase 1385404 eutD 5292390 eutD Clostridium beijerinckii NCIMB 8052 phosphotransacetylase YP_001308302.1 1384403 D 290402 CDS YP_001308303.1 150016049 5292391 1385501..1386703 1 NC_009617.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 1386703 5292391 Cbei_1165 Clostridium beijerinckii NCIMB 8052 acetate kinase YP_001308303.1 1385501 D 290402 CDS YP_001308304.1 150016050 5292392 1387051..1387557 1 NC_009617.1 PFAM: protein of unknown function DUF177; KEGG: cpf:CPF_1976 hypothetical protein; hypothetical protein 1387557 5292392 Cbei_1166 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308304.1 1387051 D 290402 CDS YP_001308305.1 150016051 5292393 1387561..1387743 1 NC_009617.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1387743 rpmF 5292393 rpmF Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L32 YP_001308305.1 1387561 D 290402 CDS YP_001308306.1 150016052 5292394 1387990..1388991 1 NC_009617.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1388991 5292394 Cbei_1168 Clostridium beijerinckii NCIMB 8052 glycerol-3-phosphate acyltransferase PlsX YP_001308306.1 1387990 D 290402 CDS YP_001308307.1 150016053 5292395 1389072..1389302 1 NC_009617.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1389302 acpP 5292395 acpP Clostridium beijerinckii NCIMB 8052 acyl carrier protein YP_001308307.1 1389072 D 290402 CDS YP_001308308.1 150016054 5292396 1389577..1390275 1 NC_009617.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1390275 rnc 5292396 rnc Clostridium beijerinckii NCIMB 8052 ribonuclease III YP_001308308.1 1389577 D 290402 CDS YP_001308309.1 150016055 5292397 1390268..1391299 1 NC_009617.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cpr:CPR_1689 radical SAM domain protein; radical SAM domain-containing protein 1391299 5292397 Cbei_1171 Clostridium beijerinckii NCIMB 8052 radical SAM domain-containing protein YP_001308309.1 1390268 D 290402 CDS YP_001308310.1 150016056 5292398 1391601..1395158 1 NC_009617.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: cno:NT01CX_2216 chromosome segregation protein SMC; chromosome segregation protein SMC 1395158 5292398 Cbei_1172 Clostridium beijerinckii NCIMB 8052 chromosome segregation protein SMC YP_001308310.1 1391601 D 290402 CDS YP_001308311.1 150016057 5292399 1395297..1396205 1 NC_009617.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G- domain; GTP-binding signal recognition particle SRP54, helical bundle; SMART: ATPase AAA; KEGG: cpe:CPE1715 signal recognition particle protein; signal recognition particle-docking protein FtsY 1396205 5292399 Cbei_1173 Clostridium beijerinckii NCIMB 8052 signal recognition particle-docking protein FtsY YP_001308311.1 1395297 D 290402 CDS YP_001308312.1 150016058 5292400 1396614..1396943 1 NC_009617.1 PFAM: helix-turn-helix protein, YlxM/p13 family protein; KEGG: cpf:CPF_1968 DNA-binding protein; DNA-binding protein 1396943 5292400 Cbei_1174 Clostridium beijerinckii NCIMB 8052 DNA-binding protein YP_001308312.1 1396614 D 290402 CDS YP_001308313.1 150016059 5292401 1396956..1398308 1 NC_009617.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54, G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54, helical bundle; SMART: ATPase AAA; KEGG: cpr:CPR_1685 signal recognition particle protein; signal recognition particle protein 1398308 5292401 Cbei_1175 Clostridium beijerinckii NCIMB 8052 signal recognition particle protein YP_001308313.1 1396956 D 290402 CDS YP_001308314.1 150016060 5292402 1398361..1398606 1 NC_009617.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 1398606 rpsP 5292402 rpsP Clostridium beijerinckii NCIMB 8052 30S ribosomal protein S16 YP_001308314.1 1398361 D 290402 CDS YP_001308315.1 150016061 5292403 1398655..1398882 1 NC_009617.1 KEGG: cac:CAC1756 predicted nucleic acid binding protein, containing KH domain; hypothetical protein 1398882 5292403 Cbei_1177 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308315.1 1398655 D 290402 CDS YP_001308316.1 150016062 5292404 1399284..1399781 1 NC_009617.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 1399781 rimM 5292404 rimM Clostridium beijerinckii NCIMB 8052 16S rRNA-processing protein RimM YP_001308316.1 1399284 D 290402 CDS YP_001308317.1 150016063 5292405 1399771..1400490 1 NC_009617.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 1400490 trmD 5292405 trmD Clostridium beijerinckii NCIMB 8052 tRNA (guanine-N(1)-)-methyltransferase YP_001308317.1 1399771 D 290402 CDS YP_001308318.1 150016064 5292406 1400607..1400957 1 NC_009617.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1400957 rplS 5292406 rplS Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L19 YP_001308318.1 1400607 D 290402 CDS YP_001308319.1 150016065 5292407 1401175..1402038 1 NC_009617.1 essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase 1402038 rbgA 5292407 rbgA Clostridium beijerinckii NCIMB 8052 ribosomal biogenesis GTPase YP_001308319.1 1401175 D 290402 CDS YP_001308320.1 150016066 5292408 1402025..1402837 1 NC_009617.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 1402837 rnhB 5292408 rnhB Clostridium beijerinckii NCIMB 8052 ribonuclease HII YP_001308320.1 1402025 D 290402 CDS YP_001308321.1 150016067 5292409 complement(1403028..1403399) 1 NC_009617.1 PFAM: protein of unknown function UPF0102; KEGG: cpe:CPE1705 predicted endonuclease; hypothetical protein 1403399 5292409 Cbei_1183 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308321.1 1403028 R 290402 CDS YP_001308322.1 150016068 5292410 1403561..1405081 1 NC_009617.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; KEGG: cpf:CPF_1958 Mg chelatase-like protein; Mg chelatase subunit ChlI 1405081 5292410 Cbei_1184 Clostridium beijerinckii NCIMB 8052 Mg chelatase subunit ChlI YP_001308322.1 1403561 D 290402 CDS YP_001308323.1 150016069 5292411 1405104..1406159 1 NC_009617.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: cno:NT01CX_2152 DNA uptake protein; DNA protecting protein DprA 1406159 5292411 Cbei_1185 Clostridium beijerinckii NCIMB 8052 DNA protecting protein DprA YP_001308323.1 1405104 D 290402 CDS YP_001308324.1 150016070 5292412 1406206..1408299 1 NC_009617.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1408299 5292412 Cbei_1186 Clostridium beijerinckii NCIMB 8052 DNA topoisomerase I YP_001308324.1 1406206 D 290402 CDS YP_001308325.1 150016071 5292413 1408508..1409284 1 NC_009617.1 CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; transcriptional repressor CodY 1409284 5292413 Cbei_1187 Clostridium beijerinckii NCIMB 8052 transcriptional repressor CodY YP_001308325.1 1408508 D 290402 CDS YP_001308326.1 150016072 5292414 1409826..1410527 1 NC_009617.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1410527 rpsB 5292414 rpsB Clostridium beijerinckii NCIMB 8052 30S ribosomal protein S2 YP_001308326.1 1409826 D 290402 CDS YP_001308327.1 150016073 5292415 1410623..1411540 1 NC_009617.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1411540 tsf 5292415 tsf Clostridium beijerinckii NCIMB 8052 elongation factor Ts YP_001308327.1 1410623 D 290402 CDS YP_001308328.1 150016074 5292416 1411649..1412371 1 NC_009617.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1412371 pyrH 5292416 pyrH Clostridium beijerinckii NCIMB 8052 uridylate kinase YP_001308328.1 1411649 D 290402 CDS YP_001308329.1 150016075 5292417 1412603..1413160 1 NC_009617.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1413160 frr 5292417 frr Clostridium beijerinckii NCIMB 8052 ribosome recycling factor YP_001308329.1 1412603 D 290402 CDS YP_001308330.1 150016076 5292418 1413573..1414331 1 NC_009617.1 TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; KEGG: ctc:CTC01265 undecaprenyl pyrophosphate synthetase; undecaprenyl diphosphate synthase 1414331 5292418 Cbei_1192 Clostridium beijerinckii NCIMB 8052 undecaprenyl diphosphate synthase YP_001308330.1 1413573 D 290402 CDS YP_001308331.1 150016077 5292419 1414347..1415141 1 NC_009617.1 PFAM: phosphatidate cytidylyltransferase; KEGG: cpr:CPR_1667 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 1415141 5292419 Cbei_1193 Clostridium beijerinckii NCIMB 8052 phosphatidate cytidylyltransferase YP_001308331.1 1414347 D 290402 CDS YP_001308332.1 150016078 5292420 1415281..1416249 1 NC_009617.1 PFAM: protein of unknown function UPF0118; KEGG: cac:CAC1794 predicted permease; hypothetical protein 1416249 5292420 Cbei_1194 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308332.1 1415281 D 290402 CDS YP_001308333.1 150016079 5292421 1416374..1417537 1 NC_009617.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1417537 5292421 Cbei_1195 Clostridium beijerinckii NCIMB 8052 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_001308333.1 1416374 D 290402 CDS YP_001308334.1 150016080 5292422 1417555..1418565 1 NC_009617.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; KEGG: cpe:CPE1693 hypothetical zinc metalloprotease; membrane-associated zinc metalloprotease 1418565 5292422 Cbei_1196 Clostridium beijerinckii NCIMB 8052 membrane-associated zinc metalloprotease YP_001308334.1 1417555 D 290402 CDS YP_001308335.1 150016081 5292423 1418910..1419989 1 NC_009617.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1419989 ispG 5292423 ispG Clostridium beijerinckii NCIMB 8052 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_001308335.1 1418910 D 290402 CDS YP_001308336.1 150016082 5292424 1420445..1420903 1 NC_009617.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 1420903 5292424 Cbei_1198 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308336.1 1420445 D 290402 CDS YP_001308337.1 150016083 5292425 1420920..1422116 1 NC_009617.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1422116 nusA 5292425 nusA Clostridium beijerinckii NCIMB 8052 transcription elongation factor NusA YP_001308337.1 1420920 D 290402 CDS YP_001308338.1 150016084 5292426 1422130..1422396 1 NC_009617.1 PFAM: protein of unknown function DUF448; KEGG: cpr:CPR_1660 hypothetical protein; hypothetical protein 1422396 5292426 Cbei_1200 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308338.1 1422130 D 290402 CDS YP_001308339.1 150016085 5292427 1422389..1422700 1 NC_009617.1 PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: cpr:CPR_1659 ribosomal protein L7Ae superfamily; 50S ribosomal protein L7Ae family protein 1422700 5292427 Cbei_1201 Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L7Ae family protein YP_001308339.1 1422389 D 290402 CDS YP_001308340.1 150016086 5292428 1422727..1424814 1 NC_009617.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1424814 infB 5292428 infB Clostridium beijerinckii NCIMB 8052 translation initiation factor IF-2 YP_001308340.1 1422727 D 290402 CDS YP_001308341.1 150016087 5292429 1424832..1425188 1 NC_009617.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 1425188 rbfA 5292429 rbfA Clostridium beijerinckii NCIMB 8052 ribosome-binding factor A YP_001308341.1 1424832 D 290402 CDS YP_001308342.1 150016088 5292430 1425181..1426161 1 NC_009617.1 PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: cpr:CPR_1656 DHH subfamily 1 protein; phosphoesterase domain-containing protein 1426161 5292430 Cbei_1204 Clostridium beijerinckii NCIMB 8052 phosphoesterase domain-containing protein YP_001308342.1 1425181 D 290402 CDS YP_001308343.1 150016089 5292431 1426232..1427131 1 NC_009617.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1427131 truB 5292431 truB Clostridium beijerinckii NCIMB 8052 tRNA pseudouridine synthase B YP_001308343.1 1426232 D 290402 CDS YP_001308344.1 150016090 5292432 1427189..1428124 1 NC_009617.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 1428124 5292432 Cbei_1206 Clostridium beijerinckii NCIMB 8052 bifunctional riboflavin kinase/FMN adenylyltransferase YP_001308344.1 1427189 D 290402 CDS YP_001308345.1 150016091 5292433 1428244..1428507 1 NC_009617.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 1428507 rpsO 5292433 rpsO Clostridium beijerinckii NCIMB 8052 30S ribosomal protein S15 YP_001308345.1 1428244 D 290402 CDS YP_001308346.1 150016092 5292434 1428614..1430719 1 NC_009617.1 PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein; KEGG: cpe:CPE1680 polyribonucleotide nucleotidyltransferase; polynucleotide phosphorylase/polyadenylase 1430719 5292434 Cbei_1208 Clostridium beijerinckii NCIMB 8052 polynucleotide phosphorylase/polyadenylase YP_001308346.1 1428614 D 290402 CDS YP_001308347.1 150016093 5292435 1430769..1432076 1 NC_009617.1 PFAM: peptidase M16 domain protein; KEGG: ctc:CTC01281 zinc protease; peptidase M16 domain-containing protein 1432076 5292435 Cbei_1209 Clostridium beijerinckii NCIMB 8052 peptidase M16 domain-containing protein YP_001308347.1 1430769 D 290402 CDS YP_001308348.1 150016094 5292436 1432144..1432425 1 NC_009617.1 TIGRFAM: Sporulation protein YlmC/YmxH; PFAM: PRC-barrel domain protein; KEGG: cpr:CPR_1651 PRC-barrel domain protein; sporulation protein YlmC/YmxH 1432425 5292436 Cbei_1210 Clostridium beijerinckii NCIMB 8052 sporulation protein YlmC/YmxH YP_001308348.1 1432144 D 290402 CDS YP_001308349.1 150016095 5292437 1432442..1433638 1 NC_009617.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; diaminopimelate sensitive; aspartate kinase I 1433638 5292437 Cbei_1211 Clostridium beijerinckii NCIMB 8052 aspartate kinase I YP_001308349.1 1432442 D 290402 CDS YP_001308350.1 150016096 5292438 1433907..1434614 1 NC_009617.1 PFAM: peptidase S14, ClpP; KEGG: cpf:CPF_1931 clp protease; peptidase S14, ClpP 1434614 5292438 Cbei_1212 Clostridium beijerinckii NCIMB 8052 peptidase S14, ClpP YP_001308350.1 1433907 D 290402 CDS YP_001308351.1 150016097 5292439 1434729..1437098 1 NC_009617.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: cpf:CPF_1930 DNA translocase FtsK; cell division protein FtsK 1437098 5292439 Cbei_1213 Clostridium beijerinckii NCIMB 8052 cell division protein FtsK YP_001308351.1 1434729 D 290402 CDS YP_001308352.1 150016098 5292440 1437313..1438710 1 NC_009617.1 KEGG: cpe:CPE1675 hypothetical protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein YliG 1438710 5292440 Cbei_1214 Clostridium beijerinckii NCIMB 8052 MiaB-like tRNA modifying protein YliG YP_001308352.1 1437313 D 290402 CDS YP_001308353.1 150016099 5292441 1438694..1439284 1 NC_009617.1 TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cpf:CPF_1928 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1439284 5292441 Cbei_1215 Clostridium beijerinckii NCIMB 8052 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001308353.1 1438694 D 290402 CDS YP_001308354.1 150016100 5292442 1439456..1440541 1 NC_009617.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1440541 recA 5292442 recA Clostridium beijerinckii NCIMB 8052 recombinase A YP_001308354.1 1439456 D 290402 CDS YP_001308355.1 150016101 5292443 1440836..1442377 1 NC_009617.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 1442377 5292443 Cbei_1217 Clostridium beijerinckii NCIMB 8052 phosphodiesterase YP_001308355.1 1440836 D 290402 CDS YP_001308356.1 150016102 5292444 1442598..1442858 1 NC_009617.1 PFAM: Stage V sporulation protein S; KEGG: cpr:CPR_1643 stage V sporulation protein S; stage V sporulation protein S 1442858 5292444 Cbei_1218 Clostridium beijerinckii NCIMB 8052 stage V sporulation protein S YP_001308356.1 1442598 D 290402 CDS YP_001308357.1 150016103 5292445 1442981..1443241 1 NC_009617.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: cpr:CPR_1641 phosphocarrier protein (HPr); PTS system phosphocarrier protein HPr 1443241 5292445 Cbei_1219 Clostridium beijerinckii NCIMB 8052 PTS system phosphocarrier protein HPr YP_001308357.1 1442981 D 290402 CDS YP_001308358.1 150016104 5292446 complement(1443369..1443587) 1 NC_009617.1 KEGG: cth:Cthe_2074 protein of unknown function DUF378; hypothetical protein 1443587 5292446 Cbei_1220 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308358.1 1443369 R 290402 CDS YP_001308359.1 150016105 5292447 1443789..1445219 1 NC_009617.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1445219 5292447 Cbei_1221 Clostridium beijerinckii NCIMB 8052 adenylosuccinate lyase YP_001308359.1 1443789 D 290402 CDS YP_001308360.1 150016106 5292448 complement(1445669..1446664) 1 NC_009617.1 KEGG: ctc:CTC01474 hypothetical protein; hypothetical protein 1446664 5292448 Cbei_1222 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308360.1 1445669 R 290402 CDS YP_001308361.1 150016107 5292449 1447124..1448374 1 NC_009617.1 KEGG: dsy:DSY2753 hypothetical protein; hypothetical protein 1448374 5292449 Cbei_1223 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308361.1 1447124 D 290402 CDS YP_001308362.1 150016108 5292450 1448876..1449961 1 NC_009617.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: cno:NT01CX_0715 riboflavin biosynthesis protein RibD; riboflavin biosynthesis protein RibD 1449961 5292450 Cbei_1224 Clostridium beijerinckii NCIMB 8052 riboflavin biosynthesis protein RibD YP_001308362.1 1448876 D 290402 CDS YP_001308363.1 150016109 5292451 1449988..1450638 1 NC_009617.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 1450638 5292451 Cbei_1225 Clostridium beijerinckii NCIMB 8052 riboflavin synthase subunit alpha YP_001308363.1 1449988 D 290402 CDS YP_001308364.1 150016110 5292452 1450703..1451896 1 NC_009617.1 PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: cpr:CPR_0532 riboflavin biosynthesis protein RibA; GTP cyclohydrolase II 1451896 5292452 Cbei_1226 Clostridium beijerinckii NCIMB 8052 GTP cyclohydrolase II YP_001308364.1 1450703 D 290402 CDS YP_001308365.1 150016111 5292453 1452064..1452528 1 NC_009617.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 1452528 ribH 5292453 ribH Clostridium beijerinckii NCIMB 8052 6,7-dimethyl-8-ribityllumazine synthase YP_001308365.1 1452064 D 290402 CDS YP_001308366.1 150016112 5292454 1453603..1454652 1 NC_009617.1 PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: gka:GK2147 transcriptional regulator; LacI family transcriptional regulator 1454652 5292454 Cbei_1228 Clostridium beijerinckii NCIMB 8052 LacI family transcriptional regulator YP_001308366.1 1453603 D 290402 CDS YP_001308367.1 150016113 5292455 1455134..1456447 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 1; KEGG: bha:BH2726 lactose transport system substrate-binding protein; extracellular solute-binding protein 1456447 5292455 Cbei_1229 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001308367.1 1455134 D 290402 CDS YP_001308368.1 150016114 5292456 1456561..1457457 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH2725 lactose transport system permease; binding-protein-dependent transport system inner membrane protein 1457457 5292456 Cbei_1230 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001308368.1 1456561 D 290402 CDS YP_001308369.1 150016115 5292457 1457447..1458280 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH2724 lactose transport system permease; binding-protein-dependent transport system inner membrane protein 1458280 5292457 Cbei_1231 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001308369.1 1457447 D 290402 CDS YP_001308370.1 150016116 5292458 1458390..1460483 1 NC_009617.1 PFAM: Glycoside hydrolase, family 42, N-terminal domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase C-terminal domain protein; KEGG: bcl:ABC3516 beta-galactosidase; beta-galactosidase 1460483 5292458 Cbei_1232 Clostridium beijerinckii NCIMB 8052 beta-galactosidase YP_001308370.1 1458390 D 290402 CDS YP_001308371.1 150016117 5292459 1460811..1461743 1 NC_009617.1 TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; Ketopantoate reductase ApbA/PanE, C-terminal domain protein; KEGG: gfo:orf2995 ketopantoate reductase PanE/ApbA; 2-dehydropantoate 2-reductase 1461743 5292459 Cbei_1233 Clostridium beijerinckii NCIMB 8052 2-dehydropantoate 2-reductase YP_001308371.1 1460811 D 290402 CDS YP_001308372.1 150016118 5292460 complement(1462166..1463956) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase internal region; KEGG: bha:BH2727 two-component sensor histidine kinase; histidine kinase internal region 1463956 5292460 Cbei_1234 Clostridium beijerinckii NCIMB 8052 histidine kinase internal region YP_001308372.1 1462166 R 290402 CDS YP_001308373.1 150016119 5292461 complement(1463987..1465540) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: bha:BH2728 two-component response regulator; response regulator receiver protein 1465540 5292461 Cbei_1235 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001308373.1 1463987 R 290402 CDS YP_001308374.1 150016120 5292462 1465940..1468966 1 NC_009617.1 PFAM: glycoside hydrolase, family 42, domain 5, loop region; glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; KEGG: lsl:LSL_0376 beta-galactosidase; glycoside hydrolase 1468966 5292462 Cbei_1236 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001308374.1 1465940 D 290402 CDS YP_001308375.1 150016121 5292463 complement(1469499..1469978) 1 NC_009617.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 1469978 5292463 Cbei_1237 Clostridium beijerinckii NCIMB 8052 S-ribosylhomocysteinase YP_001308375.1 1469499 R 290402 CDS YP_001308376.1 150016122 5292464 1470309..1470896 1 NC_009617.1 PFAM: protein of unknown function DUF479; KEGG: gfo:orf2038 protein containing DUF479; hypothetical protein 1470896 5292464 Cbei_1238 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308376.1 1470309 D 290402 CDS YP_001308377.1 150016123 5292465 1471229..1473151 1 NC_009617.1 TIGRFAM: oligopeptide transporters, OPT superfamily; oligopeptide transporter OPT family; PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: cpr:CPR_1276 oligopeptide transporter OPT family; OPT family oligopeptide transporter 1473151 5292465 Cbei_1239 Clostridium beijerinckii NCIMB 8052 OPT family oligopeptide transporter YP_001308377.1 1471229 D 290402 CDS YP_001308378.1 150016124 5292466 1473138..1473494 1 NC_009617.1 KEGG: cpe:CPE1277 hypothetical protein; hypothetical protein 1473494 5292466 Cbei_1240 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308378.1 1473138 D 290402 CDS YP_001308379.1 150016125 5292467 1473902..1475194 1 NC_009617.1 KEGG: dsy:DSY3881 hypothetical protein; hypothetical protein 1475194 5292467 Cbei_1241 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308379.1 1473902 D 290402 CDS YP_001308380.1 150016126 5292468 1475633..1476964 1 NC_009617.1 PFAM: NLP/P60 protein; KEGG: cpf:CPF_0274 SagA protein; NLP/P60 protein 1476964 5292468 Cbei_1242 Clostridium beijerinckii NCIMB 8052 NLP/P60 protein YP_001308380.1 1475633 D 290402 CDS YP_001308381.1 150016127 5292469 1477331..1477699 1 NC_009617.1 KEGG: cpf:CPF_0039 hypothetical protein; hypothetical protein 1477699 5292469 Cbei_1243 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308381.1 1477331 D 290402 CDS YP_001308382.1 150016128 5292470 complement(1477779..1479788) 1 NC_009617.1 PFAM: K+ potassium transporter; KEGG: cpf:CPF_1235 potassium transporter; K+ potassium transporter 1479788 5292470 Cbei_1244 Clostridium beijerinckii NCIMB 8052 K+ potassium transporter YP_001308382.1 1477779 R 290402 CDS YP_001308383.1 150016129 5292471 1480502..1480657 1 NC_009617.1 KEGG: cpf:CPF_1225 hypothetical protein; hypothetical protein 1480657 5292471 Cbei_1245 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308383.1 1480502 D 290402 CDS YP_001308384.1 150016130 5292472 1480679..1482085 1 NC_009617.1 PFAM: AMMECR1 domain protein; Extradiol ring-cleavage dioxygenase, class III protein, subunit B; KEGG: cac:CAC1420 protein with a fusion of two uncharacterized domains, typical for archaea; hypothetical protein 1482085 5292472 Cbei_1246 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308384.1 1480679 D 290402 CDS YP_001308385.1 150016131 5296337 complement(1483245..1483946) 1 NC_009617.1 KEGG: mja:MJ1433 hypothetical protein; hypothetical protein 1483946 5296337 Cbei_1248 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308385.1 1483245 R 290402 CDS YP_001308386.1 150016132 5292474 1484149..1484589 1 NC_009617.1 TIGRFAM: thioesterase domain, KEGG: ana:all7182 hypothetical protein; thioesterase domain-containing protein 1484589 5292474 Cbei_1249 Clostridium beijerinckii NCIMB 8052 thioesterase domain-containing protein YP_001308386.1 1484149 D 290402 CDS YP_001308387.1 150016133 5292475 1484644..1485051 1 NC_009617.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ctc:CTC02185 glyoxalase I; glyoxalase/bleomycin resistance protein/dioxygenase 1485051 5292475 Cbei_1250 Clostridium beijerinckii NCIMB 8052 glyoxalase/bleomycin resistance protein/dioxygenase YP_001308387.1 1484644 D 290402 CDS YP_001308388.1 150016134 5292476 1485144..1485539 1 NC_009617.1 hypothetical protein 1485539 5292476 Cbei_1251 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308388.1 1485144 D 290402 CDS YP_001308389.1 150016135 5292477 1485773..1486144 1 NC_009617.1 PFAM: protein of unknown function DUF326; KEGG: bca:BCE_A0193 hypothetical protein; hypothetical protein 1486144 5292477 Cbei_1252 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308389.1 1485773 D 290402 CDS YP_001308390.1 150016136 5292478 1486421..1486984 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: cac:CAC0457 transcriptional regulator, AcrR family; TetR family transcriptional regulator 1486984 5292478 Cbei_1253 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001308390.1 1486421 D 290402 CDS YP_001308391.1 150016137 5292479 1487110..1489497 1 NC_009617.1 KEGG: cac:CAC0456 ATP-dependent protease (lonA); TIGRFAM: ATP-dependent protease La; PFAM: ATPase AAA, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: peptidase S16, lon domain protein; ATPase AAA; ATP-dependent protease La 1489497 5292479 Cbei_1254 Clostridium beijerinckii NCIMB 8052 ATP-dependent protease La YP_001308391.1 1487110 D 290402 CDS YP_001308392.1 150016138 5292480 complement(1489669..1490604) 1 NC_009617.1 KEGG: bld:BLi01973 YjlA; hypothetical protein 1490604 5292480 Cbei_1255 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308392.1 1489669 R 290402 CDS YP_001308393.1 150016139 5292481 1490754..1491308 1 NC_009617.1 PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; KEGG: cno:NT01CX_0005 DNA-binding protein; helix-turn-helix domain-containing protein 1491308 5292481 Cbei_1256 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001308393.1 1490754 D 290402 CDS YP_001308394.1 150016140 5292482 1491495..1492217 1 NC_009617.1 TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: cpr:CPR_1234 precorrin-3B C17-methyltransferase; precorrin-3B C(17)-methyltransferase 1492217 5292482 Cbei_1257 Clostridium beijerinckii NCIMB 8052 precorrin-3B C(17)-methyltransferase YP_001308394.1 1491495 D 290402 CDS YP_001308395.1 150016141 5292483 1492347..1493120 1 NC_009617.1 CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase 1493120 5292483 Cbei_1258 Clostridium beijerinckii NCIMB 8052 cobalt-precorrin-6x reductase YP_001308395.1 1492347 D 290402 CDS YP_001308396.1 150016142 5296338 1493894..1494073 1 NC_009617.1 KEGG: cph:Cpha266_1405 hypothetical protein; hypothetical protein 1494073 5296338 Cbei_1260 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308396.1 1493894 D 290402 CDS YP_001308397.1 150016143 5292485 1494610..1495569 1 NC_009617.1 PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; KEGG: ctc:CTC00438 conserved phage protein; mannosyl-glycoprotein endo-beta-N-acetylglucosamidase 1495569 5292485 Cbei_1261 Clostridium beijerinckii NCIMB 8052 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase YP_001308397.1 1494610 D 290402 CDS YP_001308398.1 150016144 5292486 1495644..1496735 1 NC_009617.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1496735 cobT 5292486 cobT Clostridium beijerinckii NCIMB 8052 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_001308398.1 1495644 D 290402 CDS YP_001308399.1 150016145 5292487 1497158..1497688 1 NC_009617.1 PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; KEGG: cth:Cthe_0965 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 1497688 5292487 Cbei_1263 Clostridium beijerinckii NCIMB 8052 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YP_001308399.1 1497158 D 290402 CDS YP_001308400.1 150016146 5292488 1497727..1498266 1 NC_009617.1 KEGG: cpr:CPR_1109 hypothetical protein; hypothetical protein 1498266 5292488 Cbei_1264 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308400.1 1497727 D 290402 CDS YP_001308401.1 150016147 5292489 1498263..1499021 1 NC_009617.1 PFAM: cobalamin-5-phosphate synthase CobS; KEGG: cpr:CPR_1110 cobalamin 5'-phosphate synthase; cobalamin-5-phosphate synthase CobS 1499021 5292489 Cbei_1265 Clostridium beijerinckii NCIMB 8052 cobalamin-5-phosphate synthase CobS YP_001308401.1 1498263 D 290402 CDS YP_001308402.1 150016148 5292490 1499039..1499425 1 NC_009617.1 KEGG: cpr:CPR_1111 cobalamin biosynthesis protein CobU, , truncation; cobalamin biosynthesis protein CobU 1499425 5292490 Cbei_1266 Clostridium beijerinckii NCIMB 8052 cobalamin biosynthesis protein CobU YP_001308402.1 1499039 D 290402 CDS YP_001308403.1 150016149 5292491 1499480..1500088 1 NC_009617.1 PFAM: Phosphoglycerate mutase; KEGG: cpf:CPF_1293 phosphoglycerate mutase family protein; phosphoglycerate mutase 1500088 5292491 Cbei_1267 Clostridium beijerinckii NCIMB 8052 phosphoglycerate mutase YP_001308403.1 1499480 D 290402 CDS YP_001308404.1 150016150 5292492 1500145..1501092 1 NC_009617.1 CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 1501092 cobD 5292492 cobD Clostridium beijerinckii NCIMB 8052 cobalamin biosynthesis protein YP_001308404.1 1500145 D 290402 CDS YP_001308405.1 150016151 5292493 1501282..1502367 1 NC_009617.1 cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase; threonine-phosphate decarboxylase 1502367 5292493 Cbei_1269 Clostridium beijerinckii NCIMB 8052 threonine-phosphate decarboxylase YP_001308405.1 1501282 D 290402 CDS YP_001308406.1 150016152 5292494 1502444..1503181 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_2017 choline binding protein A; cell wall binding repeat-containing protein 1503181 5292494 Cbei_1270 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001308406.1 1502444 D 290402 CDS YP_001308407.1 150016153 5292495 1503202..1503864 1 NC_009617.1 TIGRFAM: ATP binding protein; PFAM: protein of unknown function DUF71, ATP-binding region; KEGG: cpr:CPR_1118 hypothetical protein; ATP-binding protein 1503864 5292495 Cbei_1271 Clostridium beijerinckii NCIMB 8052 ATP-binding protein YP_001308407.1 1503202 D 290402 CDS YP_001308408.1 150016154 5292496 1503972..1505471 1 NC_009617.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 1505471 5292496 Cbei_1272 Clostridium beijerinckii NCIMB 8052 cobyric acid synthase YP_001308408.1 1503972 D 290402 CDS YP_001308409.1 150016155 5292497 1505488..1506003 1 NC_009617.1 hypothetical protein 1506003 5292497 Cbei_1273 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308409.1 1505488 D 290402 CDS YP_001308410.1 150016156 5292498 complement(1506199..1506825) 1 NC_009617.1 TIGRFAM: Sporulation protein YtaF; KEGG: cno:NT01CX_0960 hypothetical protein; sporulation protein YtaF 1506825 5292498 Cbei_1274 Clostridium beijerinckii NCIMB 8052 sporulation protein YtaF YP_001308410.1 1506199 R 290402 CDS YP_001308411.1 150016157 5292499 1507136..1507948 1 NC_009617.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: cpf:CPF_0594 HAD-superfamily hydrolase, subfamily IIB; cof family hydrolase 1507948 5292499 Cbei_1275 Clostridium beijerinckii NCIMB 8052 cof family hydrolase YP_001308411.1 1507136 D 290402 CDS YP_001308412.1 150016158 5292500 1508408..1509514 1 NC_009617.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cac:CAC0277 HD-GYP hydrolase domain containing protein; metal dependent phosphohydrolase 1509514 5292500 Cbei_1276 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001308412.1 1508408 D 290402 CDS YP_001308413.1 150016159 5292501 complement(1509560..1511329) 1 NC_009617.1 TIGRFAM: adenine deaminase; PFAM: amidohydrolase; KEGG: gka:GK2098 adenine deaminase; adenine deaminase 1511329 5292501 Cbei_1277 Clostridium beijerinckii NCIMB 8052 adenine deaminase YP_001308413.1 1509560 R 290402 CDS YP_001308414.1 150016160 5292502 complement(1511587..1512645) 1 NC_009617.1 KEGG: btl:BALH_3045 hypothetical protein; hypothetical protein 1512645 5292502 Cbei_1278 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308414.1 1511587 R 290402 CDS YP_001308415.1 150016161 5292503 1513235..1514149 1 NC_009617.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 1514149 5292503 Cbei_1279 Clostridium beijerinckii NCIMB 8052 homoserine O-succinyltransferase YP_001308415.1 1513235 D 290402 CDS YP_001308416.1 150016162 5292504 1514235..1514843 1 NC_009617.1 KEGG: ctc:CTC01237 sodium-glucose/galactose cotransporter; sodium-glucose/galactose cotransporter 1514843 5292504 Cbei_1280 Clostridium beijerinckii NCIMB 8052 sodium-glucose/galactose cotransporter YP_001308416.1 1514235 D 290402 CDS YP_001308417.1 150016163 5292505 complement(1514882..1515157) 1 NC_009617.1 PFAM: protein of unknown function DUF1294; KEGG: cpr:CPR_0517 hypothetical protein; hypothetical protein 1515157 5292505 Cbei_1281 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308417.1 1514882 R 290402 CDS YP_001308418.1 150016164 5292506 complement(1515294..1515935) 1 NC_009617.1 PFAM: Di-trans-poly-cis-decaprenylcistransferase; KEGG: cpe:CPE1558 probable di-trans, poly-cis-decaprenylcistransferase; di-trans-poly-cis-decaprenylcistransferase 1515935 5292506 Cbei_1282 Clostridium beijerinckii NCIMB 8052 di-trans-poly-cis-decaprenylcistransferase YP_001308418.1 1515294 R 290402 CDS YP_001308419.1 150016165 5292507 1517021..1518226 1 NC_009617.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 1518226 hemA 5292507 hemA Clostridium beijerinckii NCIMB 8052 glutamyl-tRNA reductase YP_001308419.1 1517021 D 290402 CDS YP_001308420.1 150016166 5292508 1518184..1518864 1 NC_009617.1 catalyzes the formation of siroheme from precorrin-2; precorrin-2 dehydrogenase 1518864 5292508 Cbei_1284 Clostridium beijerinckii NCIMB 8052 precorrin-2 dehydrogenase YP_001308420.1 1518184 D 290402 CDS YP_001308421.1 150016167 5292509 1518908..1519783 1 NC_009617.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 1519783 hemC 5292509 hemC Clostridium beijerinckii NCIMB 8052 porphobilinogen deaminase YP_001308421.1 1518908 D 290402 CDS YP_001308422.1 150016168 5292510 1519796..1521259 1 NC_009617.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: cpr:CPR_1421 uroporphyrinogen-III methyltransferase/synthase; uroporphyrin-III C-methyltransferase 1521259 5292510 Cbei_1286 Clostridium beijerinckii NCIMB 8052 uroporphyrin-III C-methyltransferase YP_001308422.1 1519796 D 290402 CDS YP_001308423.1 150016169 5292511 1521358..1522323 1 NC_009617.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1522323 5292511 Cbei_1287 Clostridium beijerinckii NCIMB 8052 delta-aminolevulinic acid dehydratase YP_001308423.1 1521358 D 290402 CDS YP_001308424.1 150016170 5292512 1522561..1523856 1 NC_009617.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 1523856 5292512 Cbei_1288 Clostridium beijerinckii NCIMB 8052 glutamate-1-semialdehyde aminotransferase YP_001308424.1 1522561 D 290402 CDS YP_001308425.1 150016171 5292513 1523899..1524540 1 NC_009617.1 PFAM: protein of unknown function DUF208; KEGG: cac:CAC1577 ncharacterized conserved protein; hypothetical protein 1524540 5292513 Cbei_1289 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308425.1 1523899 D 290402 CDS YP_001308426.1 150016172 5292514 1524624..1525181 1 NC_009617.1 KEGG: cpr:CPR_2293 hypothetical protein; hypothetical protein 1525181 5292514 Cbei_1290 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308426.1 1524624 D 290402 CDS YP_001308427.1 150016173 5292515 complement(1525588..1526574) 1 NC_009617.1 KEGG: ctc:CTC01505 lipase; lipase 1526574 5292515 Cbei_1291 Clostridium beijerinckii NCIMB 8052 lipase YP_001308427.1 1525588 R 290402 CDS YP_001308428.1 150016174 5292516 1526936..1527874 1 NC_009617.1 KEGG: cpr:CPR_1374 hypothetical protein; hypothetical protein 1527874 5292516 Cbei_1292 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308428.1 1526936 D 290402 CDS YP_001308429.1 150016175 5292517 1528035..1529492 1 NC_009617.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1529492 5292517 Cbei_1293 Clostridium beijerinckii NCIMB 8052 threonine synthase YP_001308429.1 1528035 D 290402 CDS YP_001308430.1 150016176 5292518 1529504..1530400 1 NC_009617.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 1530400 5292518 Cbei_1294 Clostridium beijerinckii NCIMB 8052 homoserine kinase YP_001308430.1 1529504 D 290402 CDS YP_001308431.1 150016177 5292519 1530397..1530837 1 NC_009617.1 KEGG: cpr:CPR_1404 ACT domain protein; hypothetical protein 1530837 5292519 Cbei_1295 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308431.1 1530397 D 290402 CDS YP_001308432.1 150016178 5292520 1531054..1531608 1 NC_009617.1 hypothetical protein 1531608 5292520 Cbei_1296 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308432.1 1531054 D 290402 CDS YP_001308433.1 150016179 5292521 1532046..1532711 1 NC_009617.1 hypothetical protein 1532711 5292521 Cbei_1297 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308433.1 1532046 D 290402 CDS YP_001308434.1 150016180 5292522 complement(1533013..1533354) 1 NC_009617.1 hypothetical protein 1533354 5292522 Cbei_1298 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308434.1 1533013 R 290402 CDS YP_001308435.1 150016181 5292523 1533947..1535086 1 NC_009617.1 KEGG: ljo:LJ1035 hypothetical protein; hypothetical protein 1535086 5292523 Cbei_1299 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308435.1 1533947 D 290402 CDS YP_001308436.1 150016182 5292524 1535644..1535784 1 NC_009617.1 KEGG: cpf:CPF_1488 hypothetical protein; hypothetical protein 1535784 5292524 Cbei_1300 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308436.1 1535644 D 290402 CDS YP_001308437.1 150016183 5292525 1536000..1537073 1 NC_009617.1 KEGG: cth:Cthe_2522 membrane associated protein; membrane associated protein 1537073 5292525 Cbei_1301 Clostridium beijerinckii NCIMB 8052 membrane associated protein YP_001308437.1 1536000 D 290402 CDS YP_001308438.1 150016184 5292526 1537433..1537987 1 NC_009617.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: ctc:CTC01788 RNA polymerase sigma-70 factor; ECF subfamily RNA polymerase sigma-24 factor 1537987 5292526 Cbei_1302 Clostridium beijerinckii NCIMB 8052 ECF subfamily RNA polymerase sigma-24 factor YP_001308438.1 1537433 D 290402 CDS YP_001308439.1 150016185 5292527 1537989..1539230 1 NC_009617.1 KEGG: cth:Cthe_2522 membrane associated protein; hypothetical protein 1539230 5292527 Cbei_1303 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308439.1 1537989 D 290402 CDS YP_001308440.1 150016186 5292528 1539675..1540625 1 NC_009617.1 KEGG: ddi:DDB_0220019 C2 domain-containing protein; hypothetical protein 1540625 5292528 Cbei_1304 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308440.1 1539675 D 290402 CDS YP_001308441.1 150016187 5292529 1540942..1541889 1 NC_009617.1 KEGG: tte:TTE0419 lysophospholipase; lysophospholipase 1541889 5292529 Cbei_1305 Clostridium beijerinckii NCIMB 8052 lysophospholipase YP_001308441.1 1540942 D 290402 CDS YP_001308442.1 150016188 5292530 1542041..1542538 1 NC_009617.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 1542538 5292530 Cbei_1306 Clostridium beijerinckii NCIMB 8052 methionine sulfoxide reductase A YP_001308442.1 1542041 D 290402 CDS YP_001308443.1 150016189 5292531 complement(1542783..1543658) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: cac:CAC2818 AraC-type DNA-binding domain-containing protein, transcriptional regulator; helix-turn-helix domain-containing protein 1543658 5292531 Cbei_1307 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001308443.1 1542783 R 290402 CDS YP_001308444.1 150016190 5292532 1543978..1545447 1 NC_009617.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1545447 murE 5292532 murE Clostridium beijerinckii NCIMB 8052 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_001308444.1 1543978 D 290402 CDS YP_001308445.1 150016191 5292533 1545493..1546713 1 NC_009617.1 PFAM: sodium:dicarboxylate symporter; KEGG: bcl:ABC1665 H+/sodium:glutamate symporter; sodium:dicarboxylate symporter 1546713 5292533 Cbei_1309 Clostridium beijerinckii NCIMB 8052 sodium:dicarboxylate symporter YP_001308445.1 1545493 D 290402 CDS YP_001308446.1 150016192 5292534 1547158..1547982 1 NC_009617.1 PFAM: RelA/SpoT domain protein; KEGG: cpr:CPR_1575 GTP pyrophosphokinase-like protein; RelA/SpoT domain-containing protein 1547982 5292534 Cbei_1310 Clostridium beijerinckii NCIMB 8052 RelA/SpoT domain-containing protein YP_001308446.1 1547158 D 290402 CDS YP_001308447.1 150016193 5292535 1548048..1548923 1 NC_009617.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: cpe:CPE0393 3-hydroxyisobutyrate dehydrogenase; NAD-binding 6-phosphogluconate dehydrogenase 1548923 5292535 Cbei_1311 Clostridium beijerinckii NCIMB 8052 NAD-binding 6-phosphogluconate dehydrogenase YP_001308447.1 1548048 D 290402 CDS YP_001308448.1 150016194 5292536 1549152..1550300 1 NC_009617.1 PFAM: aminotransferase, class V; KEGG: cpf:CPF_1667 aminotransferase, class V; class V aminotransferase 1550300 5292536 Cbei_1312 Clostridium beijerinckii NCIMB 8052 class V aminotransferase YP_001308448.1 1549152 D 290402 CDS YP_001308449.1 150016195 5292537 1550300..1551457 1 NC_009617.1 Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI 1551457 5292537 Cbei_1313 Clostridium beijerinckii NCIMB 8052 thiamine biosynthesis protein ThiI YP_001308449.1 1550300 D 290402 CDS YP_001308450.1 150016196 5292538 complement(1551524..1552273) 1 NC_009617.1 PFAM: protein of unknown function DUF1275; KEGG: mac:MA1282 hypothetical protein; hypothetical protein 1552273 5292538 Cbei_1314 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308450.1 1551524 R 290402 CDS YP_001308451.1 150016197 5292539 1552544..1553689 1 NC_009617.1 PFAM: tRNA synthetase, class II (G, H, P and S); KEGG: cno:NT01CX_1060 histidyl-tRNA synthetase; histidine--tRNA ligase 1553689 5292539 Cbei_1315 Clostridium beijerinckii NCIMB 8052 histidine--tRNA ligase YP_001308451.1 1552544 D 290402 CDS YP_001308452.1 150016198 5292540 1553692..1554321 1 NC_009617.1 TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase, catalytic region; KEGG: cno:NT01CX_1061 ATP phosphoribosyltransferase; ATP phosphoribosyltransferase 1554321 5292540 Cbei_1316 Clostridium beijerinckii NCIMB 8052 ATP phosphoribosyltransferase YP_001308452.1 1553692 D 290402 CDS YP_001308453.1 150016199 5292541 1554454..1555752 1 NC_009617.1 PFAM: histidinol dehydrogenase; KEGG: cac:CAC0937 histidinol dehydrogenase; histidinol dehydrogenase 1555752 5292541 Cbei_1317 Clostridium beijerinckii NCIMB 8052 histidinol dehydrogenase YP_001308453.1 1554454 D 290402 CDS YP_001308454.1 150016200 5292542 1555739..1556779 1 NC_009617.1 PFAM: aminotransferase, class I and II; KEGG: cno:NT01CX_1063 histidinol-phosphate aminotransferase; class I and II aminotransferase 1556779 5292542 Cbei_1318 Clostridium beijerinckii NCIMB 8052 class I and II aminotransferase YP_001308454.1 1555739 D 290402 CDS YP_001308455.1 150016201 5292543 1557002..1557589 1 NC_009617.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 1557589 hisB 5292543 hisB Clostridium beijerinckii NCIMB 8052 imidazoleglycerol-phosphate dehydratase YP_001308455.1 1557002 D 290402 CDS YP_001308456.1 150016202 5292544 1557660..1558337 1 NC_009617.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 1558337 hisH 5292544 hisH Clostridium beijerinckii NCIMB 8052 imidazole glycerol phosphate synthase subunit HisH YP_001308456.1 1557660 D 290402 CDS YP_001308457.1 150016203 5292545 1558334..1559056 1 NC_009617.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1559056 5292545 Cbei_1321 Clostridium beijerinckii NCIMB 8052 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_001308457.1 1558334 D 290402 CDS YP_001308458.1 150016204 5292546 1559061..1559822 1 NC_009617.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 1559822 5292546 Cbei_1322 Clostridium beijerinckii NCIMB 8052 imidazole glycerol phosphate synthase subunit HisF YP_001308458.1 1559061 D 290402 CDS YP_001308459.1 150016205 5292547 1559880..1560209 1 NC_009617.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 1560209 hisI 5292547 hisI Clostridium beijerinckii NCIMB 8052 phosphoribosyl-AMP cyclohydrolase YP_001308459.1 1559880 D 290402 CDS YP_001308460.1 150016206 5292548 1560241..1560567 1 NC_009617.1 PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: cac:CAC0943 phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphohydrolase 1560567 5292548 Cbei_1324 Clostridium beijerinckii NCIMB 8052 phosphoribosyl-ATP pyrophosphohydrolase YP_001308460.1 1560241 D 290402 CDS YP_001308461.1 150016207 5292549 1561530..1562345 1 NC_009617.1 KEGG: ctc:CTC02377 hypothetical protein; hypothetical protein 1562345 5292549 Cbei_1325 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308461.1 1561530 D 290402 CDS YP_001308462.1 150016208 5292550 1562441..1563724 1 NC_009617.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1563724 tig 5292550 tig Clostridium beijerinckii NCIMB 8052 trigger factor YP_001308462.1 1562441 D 290402 CDS YP_001308463.1 150016209 5292551 1563880..1564479 1 NC_009617.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 1564479 clpP 5292551 clpP Clostridium beijerinckii NCIMB 8052 ATP-dependent Clp protease proteolytic subunit YP_001308463.1 1563880 D 290402 CDS YP_001308464.1 150016210 5292552 1564522..1565811 1 NC_009617.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1565811 clpX 5292552 clpX Clostridium beijerinckii NCIMB 8052 ATP-dependent protease ATP-binding subunit ClpX YP_001308464.1 1564522 D 290402 CDS YP_001308465.1 150016211 5292553 1566058..1567734 1 NC_009617.1 KEGG: cpr:CPR_1383 ATP-dependent protease LonB; TIGRFAM: Sporulation protease LonB; PFAM: magnesium chelatase, ChlI subunit; ATPase AAA, central domain protein; peptidase S16, lon domain protein; SMART: ATPase AAA; sporulation protease LonB 1567734 5292553 Cbei_1329 Clostridium beijerinckii NCIMB 8052 sporulation protease LonB YP_001308465.1 1566058 D 290402 CDS YP_001308466.1 150016212 5292554 1568042..1570372 1 NC_009617.1 KEGG: ctc:CTC02372 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; ATPase AAA, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; ATP-dependent protease La 1570372 5292554 Cbei_1330 Clostridium beijerinckii NCIMB 8052 ATP-dependent protease La YP_001308466.1 1568042 D 290402 CDS YP_001308467.1 150016213 5292555 1570362..1570958 1 NC_009617.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 1570958 engB 5292555 engB Clostridium beijerinckii NCIMB 8052 ribosome biogenesis GTP-binding protein YsxC YP_001308467.1 1570362 D 290402 CDS YP_001308468.1 150016214 5292556 1571180..1571665 1 NC_009617.1 KEGG: cpf:CPF_1642 hypothetical protein; hypothetical protein 1571665 5292556 Cbei_1332 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308468.1 1571180 D 290402 CDS YP_001308469.1 150016215 5292557 1571697..1571951 1 NC_009617.1 KEGG: cpe:CPE1386 hypothetical protein; hypothetical protein 1571951 5292557 Cbei_1333 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308469.1 1571697 D 290402 CDS YP_001308470.1 150016216 5292558 1572066..1572590 1 NC_009617.1 KEGG: cpr:CPR_1378 hypothetical protein; hypothetical protein 1572590 5292558 Cbei_1334 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308470.1 1572066 D 290402 CDS YP_001308471.1 150016217 5292559 complement(1572880..1573803) 1 NC_009617.1 KEGG: cpe:CPE1384 hypothetical protein; hypothetical protein 1573803 5292559 Cbei_1335 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308471.1 1572880 R 290402 CDS YP_001308472.1 150016218 5292560 complement(1573941..1574348) 1 NC_009617.1 PFAM: ferric-uptake regulator; KEGG: cno:NT01CX_0363 transcriptional regulator, Fur family; ferric uptake regulator family protein 1574348 5292560 Cbei_1336 Clostridium beijerinckii NCIMB 8052 ferric uptake regulator family protein YP_001308472.1 1573941 R 290402 CDS YP_001308473.1 150016219 5292561 1574762..1575088 1 NC_009617.1 KEGG: cpr:CPR_1229 hypothetical protein; hypothetical protein 1575088 5292561 Cbei_1337 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308473.1 1574762 D 290402 CDS YP_001308474.1 150016220 5292562 complement(1575610..1577094) 1 NC_009617.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1577094 5292562 Cbei_1338 Clostridium beijerinckii NCIMB 8052 nicotinate phosphoribosyltransferase YP_001308474.1 1575610 R 290402 CDS YP_001308475.1 150016221 5292563 1577394..1579409 1 NC_009617.1 PFAM: UvrD/REP helicase; KEGG: cpr:CPR_1226 ATP-dependent DNA helicase PcrA; UvrD/REP helicase 1579409 5292563 Cbei_1339 Clostridium beijerinckii NCIMB 8052 UvrD/REP helicase YP_001308475.1 1577394 D 290402 CDS YP_001308476.1 150016222 5292564 1579485..1580462 1 NC_009617.1 PFAM: phage integrase family protein; KEGG: cpe:CPE1095 probable integrase/recombinase; phage integrase family protein 1580462 5292564 Cbei_1340 Clostridium beijerinckii NCIMB 8052 phage integrase family protein YP_001308476.1 1579485 D 290402 CDS YP_001308477.1 150016223 5292565 complement(1580565..1581500) 1 NC_009617.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 1581500 5292565 Cbei_1341 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001308477.1 1580565 R 290402 CDS YP_001308478.1 150016224 5292566 complement(1581773..1583218) 1 NC_009617.1 KEGG: ddi:DDBDRAFT_0190888 hypothetical protein; hypothetical protein 1583218 5292566 Cbei_1342 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308478.1 1581773 R 290402 CDS YP_001308479.1 150016225 5292567 1583432..1583641 1 NC_009617.1 PFAM: protein of unknown function DUF1508; KEGG: chu:CHU_2608 hypothetical protein; hypothetical protein 1583641 5292567 Cbei_1343 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308479.1 1583432 D 290402 CDS YP_001308480.1 150016226 5292568 1583739..1584464 1 NC_009617.1 hypothetical protein 1584464 5292568 Cbei_1344 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308480.1 1583739 D 290402 CDS YP_001308481.1 150016227 5292569 1584496..1584795 1 NC_009617.1 hypothetical protein 1584795 5292569 Cbei_1345 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308481.1 1584496 D 290402 CDS YP_001308482.1 150016228 5292570 1585217..1585690 1 NC_009617.1 KEGG: mla:Mlab_1036 hypothetical protein; hypothetical protein 1585690 5292570 Cbei_1346 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308482.1 1585217 D 290402 CDS YP_001308483.1 150016229 5292571 complement(1585994..1586194) 1 NC_009617.1 hypothetical protein 1586194 5292571 Cbei_1347 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308483.1 1585994 R 290402 CDS YP_001308484.1 150016230 5292572 1586347..1587000 1 NC_009617.1 hypothetical protein 1587000 5292572 Cbei_1348 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308484.1 1586347 D 290402 CDS YP_001308485.1 150016231 5292573 1587498..1587851 1 NC_009617.1 hypothetical protein 1587851 5292573 Cbei_1349 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308485.1 1587498 D 290402 CDS YP_001308486.1 150016232 5292574 1587940..1588896 1 NC_009617.1 hypothetical protein 1588896 5292574 Cbei_1350 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308486.1 1587940 D 290402 CDS YP_001308487.1 150016233 5292575 1589377..1589790 1 NC_009617.1 KEGG: cac:CAC1162 hypothetical protein, CF-11 family; hypothetical protein 1589790 5292575 Cbei_1351 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308487.1 1589377 D 290402 CDS YP_001308488.1 150016234 5292576 1590099..1591946 1 NC_009617.1 hypothetical protein 1591946 5292576 Cbei_1352 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308488.1 1590099 D 290402 CDS YP_001308489.1 150016235 5292577 1592456..1595923 1 NC_009617.1 KEGG: bsu:BG13626 hypothetical protein; hypothetical protein 1595923 5292577 Cbei_1353 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308489.1 1592456 D 290402 CDS YP_001308490.1 150016236 5292578 1596636..1597271 1 NC_009617.1 hypothetical protein 1597271 5292578 Cbei_1354 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308490.1 1596636 D 290402 CDS YP_001308491.1 150016237 5292579 1597845..1598399 1 NC_009617.1 hypothetical protein 1598399 5292579 Cbei_1355 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308491.1 1597845 D 290402 CDS YP_001308492.1 150016238 5292580 1598410..1598715 1 NC_009617.1 hypothetical protein 1598715 5292580 Cbei_1356 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308492.1 1598410 D 290402 CDS YP_001308493.1 150016239 5292581 1598786..1599625 1 NC_009617.1 KEGG: sha:SH2354 hypothetical protein; hypothetical protein 1599625 5292581 Cbei_1357 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308493.1 1598786 D 290402 CDS YP_001308494.1 150016240 5292582 1599758..1600015 1 NC_009617.1 PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 1600015 5292582 Cbei_1358 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001308494.1 1599758 D 290402 CDS YP_001308495.1 150016241 5292583 1600027..1600443 1 NC_009617.1 hypothetical protein 1600443 5292583 Cbei_1359 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308495.1 1600027 D 290402 CDS YP_001308496.1 150016242 5292584 1600436..1602001 1 NC_009617.1 KEGG: swo:Swol_1310 hypothetical protein; hypothetical protein 1602001 5292584 Cbei_1360 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308496.1 1600436 D 290402 CDS YP_001308497.1 150016243 5292585 1602034..1602261 1 NC_009617.1 hypothetical protein 1602261 5292585 Cbei_1361 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308497.1 1602034 D 290402 CDS YP_001308498.1 150016244 5292586 1602375..1602947 1 NC_009617.1 hypothetical protein 1602947 5292586 Cbei_1362 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308498.1 1602375 D 290402 CDS YP_001308499.1 150016245 5292587 1603061..1603216 1 NC_009617.1 hypothetical protein 1603216 5292587 Cbei_1363 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308499.1 1603061 D 290402 CDS YP_001308500.1 150016246 5292588 1603238..1603501 1 NC_009617.1 hypothetical protein 1603501 5292588 Cbei_1364 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308500.1 1603238 D 290402 CDS YP_001308501.1 150016247 5292589 1603572..1604840 1 NC_009617.1 hypothetical protein 1604840 5292589 Cbei_1365 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308501.1 1603572 D 290402 CDS YP_001308502.1 150016248 5292590 1604866..1605522 1 NC_009617.1 hypothetical protein 1605522 5292590 Cbei_1366 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308502.1 1604866 D 290402 CDS YP_001308503.1 150016249 5292591 1605526..1606107 1 NC_009617.1 hypothetical protein 1606107 5292591 Cbei_1367 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308503.1 1605526 D 290402 CDS YP_001308504.1 150016250 5292592 1606185..1611854 1 NC_009617.1 TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: bsu:BG13596 similar to lytic transglycosylase; TP901 family phage tail tape measure protein 1611854 5292592 Cbei_1368 Clostridium beijerinckii NCIMB 8052 TP901 family phage tail tape measure protein YP_001308504.1 1606185 D 290402 CDS YP_001308505.1 150016251 5292593 1611921..1612217 1 NC_009617.1 hypothetical protein 1612217 5292593 Cbei_1369 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308505.1 1611921 D 290402 CDS YP_001308506.1 150016252 5292594 1612317..1613705 1 NC_009617.1 PFAM: phage portal protein, SPP1; KEGG: swo:Swol_1309 hypothetical protein; phage portal protein, SPP1 1613705 5292594 Cbei_1370 Clostridium beijerinckii NCIMB 8052 phage portal protein, SPP1 YP_001308506.1 1612317 D 290402 CDS YP_001308507.1 150016253 5292595 1614530..1615357 1 NC_009617.1 hypothetical protein 1615357 5292595 Cbei_1371 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308507.1 1614530 D 290402 CDS YP_001308508.1 150016254 5292596 1615389..1615922 1 NC_009617.1 hypothetical protein 1615922 5292596 Cbei_1372 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308508.1 1615389 D 290402 CDS YP_001308509.1 150016255 5292597 1616074..1616661 1 NC_009617.1 PFAM: phage integrase family protein; KEGG: cac:CAC2813 predicted integrase of XerC/XerD family; phage integrase family protein 1616661 5292597 Cbei_1373 Clostridium beijerinckii NCIMB 8052 phage integrase family protein YP_001308509.1 1616074 D 290402 CDS YP_001308510.1 150016256 5292598 1616737..1617120 1 NC_009617.1 hypothetical protein 1617120 5292598 Cbei_1374 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308510.1 1616737 D 290402 CDS YP_001308511.1 150016257 5292599 1617133..1618221 1 NC_009617.1 PFAM: Ig domain protein, group 2 domain protein; KEGG: swo:Swol_1304 hypothetical protein; Ig domain-containing protein 1618221 5292599 Cbei_1375 Clostridium beijerinckii NCIMB 8052 Ig domain-containing protein YP_001308511.1 1617133 D 290402 CDS YP_001308512.1 150016258 5292600 1618237..1618506 1 NC_009617.1 KEGG: ctc:pE88_04 UviB homologous protein; UviB-like protein 1618506 5292600 Cbei_1376 Clostridium beijerinckii NCIMB 8052 UviB-like protein YP_001308512.1 1618237 D 290402 CDS YP_001308513.1 150016259 5292601 1618708..1619007 1 NC_009617.1 hypothetical protein 1619007 5292601 Cbei_1377 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308513.1 1618708 D 290402 CDS YP_001308514.1 150016260 5292602 1618997..1619557 1 NC_009617.1 hypothetical protein 1619557 5292602 Cbei_1378 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308514.1 1618997 D 290402 CDS YP_001308515.1 150016261 5296339 complement(1620302..1621297) 1 NC_009617.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: msu:MS0063 periplasmic sugar-binding proteins; periplasmic binding protein/LacI transcriptional regulator 1621297 5296339 Cbei_1380 Clostridium beijerinckii NCIMB 8052 periplasmic binding protein/LacI transcriptional regulator YP_001308515.1 1620302 R 290402 CDS YP_001308516.1 150016262 5292604 complement(1621364..1622989) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: cpf:CPF_2344 DNA-binding response regulator, AraC family; response regulator receiver protein 1622989 5292604 Cbei_1381 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001308516.1 1621364 R 290402 CDS YP_001308517.1 150016263 5292605 complement(1623049..1624788) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase internal region; KEGG: ctc:CTC01848 two-component sensor kinase YesM; histidine kinase internal region 1624788 5292605 Cbei_1382 Clostridium beijerinckii NCIMB 8052 histidine kinase internal region YP_001308517.1 1623049 R 290402 CDS YP_001308518.1 150016264 5292606 1625239..1626981 1 NC_009617.1 uncharacterized member of the SSS superfamily of sodium-dependent solute transporters; unknown function; symporter YidK 1626981 5292606 Cbei_1383 Clostridium beijerinckii NCIMB 8052 symporter YidK YP_001308518.1 1625239 D 290402 CDS YP_001308519.1 150016265 5292607 1627529..1627864 1 NC_009617.1 hypothetical protein 1627864 5292607 Cbei_1384 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308519.1 1627529 D 290402 CDS YP_001308520.1 150016266 5292608 1628379..1630472 1 NC_009617.1 KEGG: cno:NT01CX_1629 cell division protein FtsA; cell division protein FtsA 1630472 5292608 Cbei_1385 Clostridium beijerinckii NCIMB 8052 cell division protein FtsA YP_001308520.1 1628379 D 290402 CDS YP_001308521.1 150016267 5292609 1630626..1631807 1 NC_009617.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: cpr:CPR_1225 amidohydrolase family protein; amidohydrolase 1631807 5292609 Cbei_1386 Clostridium beijerinckii NCIMB 8052 amidohydrolase YP_001308521.1 1630626 D 290402 CDS YP_001308522.1 150016268 5292610 1631901..1632875 1 NC_009617.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cpf:CPF_1414 pseudouridine synthase, RluA family; RluA family pseudouridine synthase 1632875 5292610 Cbei_1387 Clostridium beijerinckii NCIMB 8052 RluA family pseudouridine synthase YP_001308522.1 1631901 D 290402 CDS YP_001308523.1 150016269 5292611 1632885..1634501 1 NC_009617.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: cpf:CPF_1413 stage V sporulation protein B; polysaccharide biosynthesis protein 1634501 5292611 Cbei_1388 Clostridium beijerinckii NCIMB 8052 polysaccharide biosynthesis protein YP_001308523.1 1632885 D 290402 CDS YP_001308524.1 150016270 5292612 complement(1634681..1636141) 1 NC_009617.1 TIGRFAM: Sporulation stage V, protein B; PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: cpe:CPE1648 stage V sporulation protein B; sporulation stage V, protein B 1636141 5292612 Cbei_1389 Clostridium beijerinckii NCIMB 8052 sporulation stage V, protein B YP_001308524.1 1634681 R 290402 CDS YP_001308525.1 150016271 5292613 1636368..1637198 1 NC_009617.1 PFAM: chemotaxis sensory transducer; KEGG: cac:CAC1601 methyl-accepting chemotaxis-like protein (chemotaxis sensory transducer); methyl-accepting chemotaxis sensory transducer 1637198 5292613 Cbei_1390 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001308525.1 1636368 D 290402 CDS YP_001308526.1 150016272 5292614 1637427..1638257 1 NC_009617.1 PFAM: chemotaxis sensory transducer; KEGG: cac:CAC1601 methyl-accepting chemotaxis-like protein (chemotaxis sensory transducer); methyl-accepting chemotaxis sensory transducer 1638257 5292614 Cbei_1391 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001308526.1 1637427 D 290402 CDS YP_001308527.1 150016273 5292615 1638507..1639811 1 NC_009617.1 KEGG: cno:NT01CX_1637 predicted membrane protein; membrane protein 1639811 5292615 Cbei_1392 Clostridium beijerinckii NCIMB 8052 membrane protein YP_001308527.1 1638507 D 290402 CDS YP_001308528.1 150016274 5292616 1639943..1640521 1 NC_009617.1 KEGG: ctc:CTC00991 hypothetical protein; hypothetical protein 1640521 5292616 Cbei_1393 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308528.1 1639943 D 290402 CDS YP_001308529.1 150016275 5292617 1640496..1642154 1 NC_009617.1 PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cpf:CPF_1897 radical SAM domain protein; radical SAM domain-containing protein 1642154 5292617 Cbei_1394 Clostridium beijerinckii NCIMB 8052 radical SAM domain-containing protein YP_001308529.1 1640496 D 290402 CDS YP_001308530.1 150016276 5292618 1642432..1642893 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: cac:CAC3406 transcriptional regulator, MarR/EmrR family; MarR family transcriptional regulator 1642893 5292618 Cbei_1395 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001308530.1 1642432 D 290402 CDS YP_001308531.1 150016277 5292619 1642905..1644218 1 NC_009617.1 PFAM: BAAT/Acyl-CoA thioester hydrolase-like; KEGG: cac:CAC3407 acyl-CoA thioesterase 1; BAAT/Acyl-CoA thioester hydrolase-like protein 1644218 5292619 Cbei_1396 Clostridium beijerinckii NCIMB 8052 BAAT/Acyl-CoA thioester hydrolase-like protein YP_001308531.1 1642905 D 290402 CDS YP_001308532.1 150016278 5292620 1644433..1644753 1 NC_009617.1 PFAM: transposase IS3/IS911 family protein; KEGG: san:gbs0621 hypothetical protein; transposase IS3/IS911 family protein 1644753 5292620 Cbei_1397 Clostridium beijerinckii NCIMB 8052 transposase IS3/IS911 family protein YP_001308532.1 1644433 D 290402 CDS YP_001308533.1 150016279 5292621 1644798..1645613 1 NC_009617.1 PFAM: Integrase, catalytic region; KEGG: lca:LSEI_1907 transposase; integrase catalytic subunit 1645613 5292621 Cbei_1398 Clostridium beijerinckii NCIMB 8052 integrase catalytic subunit YP_001308533.1 1644798 D 290402 CDS YP_001308534.1 150016280 5296340 1646171..1647121 1 NC_009617.1 PFAM: glycosyl transferase, family 4; KEGG: cpf:CPF_1886 glycosyl transferase, group 4 family protein; glycosyl transferase family protein 1647121 5296340 Cbei_1400 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001308534.1 1646171 D 290402 CDS YP_001308535.1 150016281 5292623 1647491..1648174 1 NC_009617.1 PFAM: Vitamin B12 dependent methionine synthase, activation region; KEGG: ctc:CTC01807 5-methyltetrahydrofolate--homocysteine methyltransferase; vitamin B12 dependent methionine synthase, activation region 1648174 5292623 Cbei_1401 Clostridium beijerinckii NCIMB 8052 vitamin B12 dependent methionine synthase, activation region YP_001308535.1 1647491 D 290402 CDS YP_001308536.1 150016282 5292624 1648164..1650569 1 NC_009617.1 PFAM: dihydropteroate synthase, DHPS; homocysteine S-methyltransferase; Methionine synthase, B12-binding module, cap domain protein; cobalamin B12-binding domain protein; KEGG: cno:NT01CX_2109 5-methyltetrahydrofolate--homocysteine methyltransferase; homocysteine S-methyltransferase 1650569 5292624 Cbei_1402 Clostridium beijerinckii NCIMB 8052 homocysteine S-methyltransferase YP_001308536.1 1648164 D 290402 CDS YP_001308537.1 150016283 5292625 complement(1650680..1651483) 1 NC_009617.1 KEGG: cac:CAC1330 metal-dependent hydrolase of the beta-lactamase superfamily, possible sulfatase; beta-lactamase superfamily hydrolase 1651483 5292625 Cbei_1403 Clostridium beijerinckii NCIMB 8052 beta-lactamase superfamily hydrolase YP_001308537.1 1650680 R 290402 CDS YP_001308538.1 150016284 5292626 1651681..1652280 1 NC_009617.1 KEGG: cno:NT01CX_1651 hypothetical protein; hypothetical protein 1652280 5292626 Cbei_1404 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308538.1 1651681 D 290402 CDS YP_001308539.1 150016285 5292627 1652552..1652797 1 NC_009617.1 PFAM: protein of unknown function DUF1292; KEGG: cpr:CPR_1590 hypothetical protein; hypothetical protein 1652797 5292627 Cbei_1405 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308539.1 1652552 D 290402 CDS YP_001308540.1 150016286 5292628 1652814..1653212 1 NC_009617.1 KEGG: cpr:CPR_1589 hypothetical protein; hypothetical protein 1653212 5292628 Cbei_1406 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308540.1 1652814 D 290402 CDS YP_001308541.1 150016287 5292629 1654163..1654363 1 NC_009617.1 KEGG: cpr:CPR_1073 hypothetical protein; hypothetical protein 1654363 5292629 Cbei_1407 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308541.1 1654163 D 290402 CDS YP_001308542.1 150016288 5292630 1654370..1655278 1 NC_009617.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 1655278 5292630 Cbei_1408 Clostridium beijerinckii NCIMB 8052 HPr kinase/phosphorylase YP_001308542.1 1654370 D 290402 CDS YP_001308543.1 150016289 5292631 1655378..1656775 1 NC_009617.1 catalyzes the removal of amino acids from the N termini of peptides; aminopeptidase 1 1656775 5292631 Cbei_1409 Clostridium beijerinckii NCIMB 8052 aminopeptidase 1 YP_001308543.1 1655378 D 290402 CDS YP_001308544.1 150016290 5292632 complement(1656862..1657701) 1 NC_009617.1 PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cpr:CPR_1092 predicted metal-dependent phosphoesterase (PHP family); phosphotransferase domain-containing protein 1657701 5292632 Cbei_1410 Clostridium beijerinckii NCIMB 8052 phosphotransferase domain-containing protein YP_001308544.1 1656862 R 290402 CDS YP_001308545.1 150016291 5292633 complement(1657953..1658435) 1 NC_009617.1 KEGG: cac:CAC1093 hypothetical secreted protein; hypothetical protein 1658435 5292633 Cbei_1411 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308545.1 1657953 R 290402 CDS YP_001308546.1 150016292 5292634 1658581..1659603 1 NC_009617.1 PFAM: Pyruvate kinase, barrel; KEGG: cpe:CPE1025 probable pyruvate kinase; pyruvate kinase 1659603 5292634 Cbei_1412 Clostridium beijerinckii NCIMB 8052 pyruvate kinase YP_001308546.1 1658581 D 290402 CDS YP_001308547.1 150016293 5292635 complement(1659774..1660268) 1 NC_009617.1 KEGG: cno:NT01CX_1375 predicted membrane protein; membrane protein 1660268 5292635 Cbei_1413 Clostridium beijerinckii NCIMB 8052 membrane protein YP_001308547.1 1659774 R 290402 CDS YP_001308548.1 150016294 5292636 complement(1660446..1661051) 1 NC_009617.1 PFAM: heat shock protein DnaJ domain protein; Tetratricopeptide TPR_2 repeat protein; KEGG: cno:NT01CX_1376 molecular chaperone, DnaJ family (contain C-term. Zn finger domain); heat shock protein DnaJ domain-containing protein 1661051 5292636 Cbei_1414 Clostridium beijerinckii NCIMB 8052 heat shock protein DnaJ domain-containing protein YP_001308548.1 1660446 R 290402 CDS YP_001308549.1 150016295 5292637 complement(1661051..1661956) 1 NC_009617.1 KEGG: cac:CAC0649 uncharacterized protein, homolog of Thermotoga maritima (4982386); hypothetical protein 1661956 5292637 Cbei_1415 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308549.1 1661051 R 290402 CDS YP_001308550.1 150016296 5292638 1662366..1662908 1 NC_009617.1 PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: cpr:CPR_0682 rubredoxin/rubrerythrin; rubrerythrin 1662908 5292638 Cbei_1416 Clostridium beijerinckii NCIMB 8052 rubrerythrin YP_001308550.1 1662366 D 290402 CDS YP_001308551.1 150016297 5292639 complement(1663012..1663656) 1 NC_009617.1 PFAM: Appr-1-p processing domain protein; KEGG: cth:Cthe_2058 Appr-1-p processing protein; appr-1-p processing domain-containing protein 1663656 5292639 Cbei_1417 Clostridium beijerinckii NCIMB 8052 appr-1-p processing domain-containing protein YP_001308551.1 1663012 R 290402 CDS YP_001308552.1 150016298 5292640 complement(1663898..1664164) 1 NC_009617.1 hypothetical protein 1664164 5292640 Cbei_1418 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308552.1 1663898 R 290402 CDS YP_001308553.1 150016299 5292641 1665220..1666587 1 NC_009617.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cac:CAC0847 probable cation efflux pump (multidrug resistance protein); MATE efflux family protein 1666587 5292641 Cbei_1419 Clostridium beijerinckii NCIMB 8052 MATE efflux family protein YP_001308553.1 1665220 D 290402 CDS YP_001308554.1 150016300 5292642 1666790..1667824 1 NC_009617.1 KEGG: ctc:CTC00791 hypothetical protein; hypothetical protein 1667824 5292642 Cbei_1420 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308554.1 1666790 D 290402 CDS YP_001308555.1 150016301 5292643 1667839..1668879 1 NC_009617.1 KEGG: ctc:CTC00792 hypothetical protein; hypothetical protein 1668879 5292643 Cbei_1421 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308555.1 1667839 D 290402 CDS YP_001308556.1 150016302 5292644 1668991..1669242 1 NC_009617.1 KEGG: cno:NT01CX_1483 hypothetical protein; hypothetical protein 1669242 5292644 Cbei_1422 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308556.1 1668991 D 290402 CDS YP_001308557.1 150016303 5292645 1669519..1670295 1 NC_009617.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 1670295 5292645 Cbei_1423 Clostridium beijerinckii NCIMB 8052 prolipoprotein diacylglyceryl transferase YP_001308557.1 1669519 D 290402 CDS YP_001308558.1 150016304 5292646 complement(1670384..1670962) 1 NC_009617.1 KEGG: cno:NT01CX_0179 serine/threonine kinase related protein; serine/threonine kinase-like protein 1670962 5292646 Cbei_1424 Clostridium beijerinckii NCIMB 8052 serine/threonine kinase-like protein YP_001308558.1 1670384 R 290402 CDS YP_001308559.1 150016305 5292647 1671119..1671616 1 NC_009617.1 KEGG: cac:CAC0544 permease; permease 1671616 5292647 Cbei_1425 Clostridium beijerinckii NCIMB 8052 permease YP_001308559.1 1671119 D 290402 CDS YP_001308560.1 150016306 5292648 1672067..1672708 1 NC_009617.1 PFAM: protein of unknown function DUF1121; KEGG: ctc:CTC00589 hypothetical protein; hypothetical protein 1672708 5292648 Cbei_1426 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308560.1 1672067 D 290402 CDS YP_001308561.1 150016307 5292649 1672992..1674653 1 NC_009617.1 TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase, class Ic; KEGG: cpf:CPF_1255 glutamyl-tRNA synthetase; glutamyl-tRNA synthetase 1674653 5292649 Cbei_1427 Clostridium beijerinckii NCIMB 8052 glutamyl-tRNA synthetase YP_001308561.1 1672992 D 290402 CDS YP_001308562.1 150016308 5292650 complement(1674736..1676499) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: cac:CAC2547 possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain; methyl-accepting chemotaxis sensory transducer 1676499 5292650 Cbei_1428 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001308562.1 1674736 R 290402 CDS YP_001308563.1 150016309 5292651 complement(1676766..1678427) 1 NC_009617.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 1678427 5292651 Cbei_1429 Clostridium beijerinckii NCIMB 8052 glutaminyl-tRNA synthetase YP_001308563.1 1676766 R 290402 CDS YP_001308564.1 150016310 5292652 1678946..1679602 1 NC_009617.1 PFAM: protein of unknown function DUF161; KEGG: dsy:DSY3984 hypothetical protein; hypothetical protein 1679602 5292652 Cbei_1430 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308564.1 1678946 D 290402 CDS YP_001308565.1 150016311 5292653 1680235..1681512 1 NC_009617.1 TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); seryl-tRNA synthetase, class IIa; KEGG: pfu:PF1204 seryl-tRNA synthetase; seryl-tRNA synthetase 1681512 5292653 Cbei_1431 Clostridium beijerinckii NCIMB 8052 seryl-tRNA synthetase YP_001308565.1 1680235 D 290402 CDS YP_001308566.1 150016312 5292654 1681863..1682096 1 NC_009617.1 KEGG: cac:CAC0072 hypothetical protein; hypothetical protein 1682096 5292654 Cbei_1432 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308566.1 1681863 D 290402 CDS YP_001308567.1 150016313 5292655 1682137..1682775 1 NC_009617.1 KEGG: sec:SC064 hypothetical protein; hypothetical protein 1682775 5292655 Cbei_1433 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308567.1 1682137 D 290402 CDS YP_001308568.1 150016314 5292656 1683166..1684869 1 NC_009617.1 catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 1684869 5292656 Cbei_1434 Clostridium beijerinckii NCIMB 8052 hydroxylamine reductase YP_001308568.1 1683166 D 290402 CDS YP_001308569.1 150016315 5292657 1686239..1688059 1 NC_009617.1 PFAM: Heavy metal transport/detoxification protein; KEGG: cac:CAC1554 heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis CycZ-like domain, possible membrane copper tolerance protein; heavy metal transport/detoxification protein 1688059 5292657 Cbei_1435 Clostridium beijerinckii NCIMB 8052 heavy metal transport/detoxification protein YP_001308569.1 1686239 D 290402 CDS YP_001308570.1 150016316 5292658 1688403..1689662 1 NC_009617.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: swo:Swol_0162 subtilisin-like serine proteases-like; peptidase S8/S53 subtilisin kexin sedolisin 1689662 5292658 Cbei_1436 Clostridium beijerinckii NCIMB 8052 peptidase S8/S53 subtilisin kexin sedolisin YP_001308570.1 1688403 D 290402 CDS YP_001308571.1 150016317 5292659 1689916..1691145 1 NC_009617.1 KEGG: bca:BCE_0720 lipoprotein; lipoprotein 1691145 5292659 Cbei_1437 Clostridium beijerinckii NCIMB 8052 lipoprotein YP_001308571.1 1689916 D 290402 CDS YP_001308572.1 150016318 5292660 1691219..1691575 1 NC_009617.1 KEGG: bcz:pE33L466_0396 hypothetical protein; hypothetical protein 1691575 5292660 Cbei_1438 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308572.1 1691219 D 290402 CDS YP_001308573.1 150016319 5292661 complement(1691825..1692859) 1 NC_009617.1 PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: ooe:OEOE_0808 transcriptional regulator; LacI family transcriptional regulator 1692859 5292661 Cbei_1439 Clostridium beijerinckii NCIMB 8052 LacI family transcriptional regulator YP_001308573.1 1691825 R 290402 CDS YP_001308574.1 150016320 5292662 1693306..1694598 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 1; KEGG: oih:OB2570 multiple sugar-binding transport system multiple sugar-binding protein; extracellular solute-binding protein 1694598 5292662 Cbei_1440 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001308574.1 1693306 D 290402 CDS YP_001308575.1 150016321 5292663 1694866..1695801 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB2569 multiple sugar-binding transport system permease; binding-protein-dependent transport system inner membrane protein 1695801 5292663 Cbei_1441 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001308575.1 1694866 D 290402 CDS YP_001308576.1 150016322 5292664 1695801..1696658 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB2568 multiple sugar-binding transport system permease; binding-protein-dependent transport system inner membrane protein 1696658 5292664 Cbei_1442 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001308576.1 1695801 D 290402 CDS YP_001308577.1 150016323 5292665 1696780..1699152 1 NC_009617.1 PFAM: glycoside hydrolase, family 31; KEGG: lac:LBA1812 alpha-glucosidase II; Alpha-glucosidase 1699152 5292665 Cbei_1443 Clostridium beijerinckii NCIMB 8052 Alpha-glucosidase YP_001308577.1 1696780 D 290402 CDS YP_001308578.1 150016324 5292666 1699187..1700851 1 NC_009617.1 PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: lmf:LMOf2365_0270 oligo-1,6-glucosidase; alpha amylase 1700851 5292666 Cbei_1444 Clostridium beijerinckii NCIMB 8052 alpha amylase YP_001308578.1 1699187 D 290402 CDS YP_001308579.1 150016325 5292667 1701070..1701957 1 NC_009617.1 PFAM: protein of unknown function DUF1002; KEGG: ctc:CTC01501 hypothetical protein; hypothetical protein 1701957 5292667 Cbei_1445 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308579.1 1701070 D 290402 CDS YP_001308580.1 150016326 5292668 1702276..1703478 1 NC_009617.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 1703478 nhaA 5292668 nhaA Clostridium beijerinckii NCIMB 8052 pH-dependent sodium/proton antiporter YP_001308580.1 1702276 D 290402 CDS YP_001308581.1 150016327 5292669 1703663..1703869 1 NC_009617.1 PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: cpr:CPR_1411 small, acid-soluble spore protein; small acid-soluble spore protein, alpha/beta type 1703869 5292669 Cbei_1447 Clostridium beijerinckii NCIMB 8052 small acid-soluble spore protein, alpha/beta type YP_001308581.1 1703663 D 290402 CDS YP_001308582.1 150016328 5292670 1704406..1704771 1 NC_009617.1 PFAM: ArsR family transcriptional regulator; KEGG: cpf:CPF_2588 cadmium resistance transcriptional regulator CadC; ArsR family transcriptional regulator 1704771 5292670 Cbei_1448 Clostridium beijerinckii NCIMB 8052 ArsR family transcriptional regulator YP_001308582.1 1704406 D 290402 CDS YP_001308583.1 150016329 5292671 1704794..1707223 1 NC_009617.1 TIGRFAM: ATPase P; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: dsy:DSY0829 hypothetical protein; heavy metal translocating P-type ATPase 1707223 5292671 Cbei_1449 Clostridium beijerinckii NCIMB 8052 heavy metal translocating P-type ATPase YP_001308583.1 1704794 D 290402 CDS YP_001308584.1 150016330 5292672 1707350..1708042 1 NC_009617.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: cth:Cthe_2978 transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator 1708042 5292672 Cbei_1450 Clostridium beijerinckii NCIMB 8052 Crp/Fnr family transcriptional regulator YP_001308584.1 1707350 D 290402 CDS YP_001308585.1 150016331 5292673 1708082..1708402 1 NC_009617.1 PFAM: Rhodanese domain protein; KEGG: cac:CA_P0032 rhodanese-like domain; rhodanese domain-containing protein 1708402 5292673 Cbei_1451 Clostridium beijerinckii NCIMB 8052 rhodanese domain-containing protein YP_001308585.1 1708082 D 290402 CDS YP_001308586.1 150016332 5292674 1708476..1708835 1 NC_009617.1 TIGRFAM: C_GCAxxG_C_C family protein; KEGG: cac:CA_P0033 hypothetical protein; C_GCAxxG_C_C family protein 1708835 5292674 Cbei_1452 Clostridium beijerinckii NCIMB 8052 C_GCAxxG_C_C family protein YP_001308586.1 1708476 D 290402 CDS YP_001308587.1 150016333 5292675 complement(1708917..1709783) 1 NC_009617.1 KEGG: bld:BLi02295 YodP; hypothetical protein 1709783 5292675 Cbei_1453 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308587.1 1708917 R 290402 CDS YP_001308588.1 150016334 5292676 1710396..1712225 1 NC_009617.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: cpf:CPF_2369 subtilase family protein; peptidase S8/S53 subtilisin kexin sedolisin 1712225 5292676 Cbei_1454 Clostridium beijerinckii NCIMB 8052 peptidase S8/S53 subtilisin kexin sedolisin YP_001308588.1 1710396 D 290402 CDS YP_001308589.1 150016335 5292677 1712400..1713614 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_2017 choline binding protein A; cell wall binding repeat-containing protein 1713614 5292677 Cbei_1455 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001308589.1 1712400 D 290402 CDS YP_001308590.1 150016336 5292678 1714215..1716053 1 NC_009617.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: cpf:CPF_2369 subtilase family protein; peptidase S8/S53 subtilisin kexin sedolisin 1716053 5292678 Cbei_1456 Clostridium beijerinckii NCIMB 8052 peptidase S8/S53 subtilisin kexin sedolisin YP_001308590.1 1714215 D 290402 CDS YP_001308591.1 150016337 5292679 1716289..1716453 1 NC_009617.1 KEGG: cth:Cthe_3121 hypothetical protein; hypothetical protein 1716453 5292679 Cbei_1457 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308591.1 1716289 D 290402 CDS YP_001308592.1 150016338 5292680 complement(1716799..1720317) 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cth:Cthe_3120 pyruvate flavodoxin/ferredoxin oxidoreductase-like protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 1720317 5292680 Cbei_1458 Clostridium beijerinckii NCIMB 8052 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_001308592.1 1716799 R 290402 CDS YP_001308593.1 150016339 5292681 1720482..1720787 1 NC_009617.1 KEGG: cth:Cthe_0266 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1720787 5292681 Cbei_1459 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001308593.1 1720482 D 290402 CDS YP_001308594.1 150016340 5292682 complement(1721076..1721654) 1 NC_009617.1 KEGG: cac:CAC3379 uncharacterized protein, YQFW B.subtilis homolog; hypothetical protein 1721654 5292682 Cbei_1460 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308594.1 1721076 R 290402 CDS YP_001308595.1 150016341 5292683 1722729..1722878 1 NC_009617.1 hypothetical protein 1722878 5292683 Cbei_1461 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308595.1 1722729 D 290402 CDS YP_001308596.1 150016342 5292684 1722981..1723220 1 NC_009617.1 hypothetical protein 1723220 5292684 Cbei_1462 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308596.1 1722981 D 290402 CDS YP_001308597.1 150016343 5292685 1724073..1726019 1 NC_009617.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; ATPase associated with various cellular activities, AAA_5; SMART: PAS domain containing protein; ATPase AAA; KEGG: cno:NT01CX_0345 aco operon expression regulatory protein; Fis family GAF modulated sigma54 specific transcriptional regulator 1726019 5292685 Cbei_1463 Clostridium beijerinckii NCIMB 8052 Fis family GAF modulated sigma54 specific transcriptional regulator YP_001308597.1 1724073 D 290402 CDS YP_001308598.1 150016344 5292686 1726260..1727342 1 NC_009617.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cno:NT01CX_0344 2,3-butanediol dehydrogenase; alcohol dehydrogenase 1727342 5292686 Cbei_1464 Clostridium beijerinckii NCIMB 8052 alcohol dehydrogenase YP_001308598.1 1726260 D 290402 CDS YP_001308599.1 150016345 5292687 1727494..1728384 1 NC_009617.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: cpf:CPF_1464 oxidoreductase, NAD-binding; ferredoxin-NADP(+) reductase subunit alpha 1728384 5292687 Cbei_1465 Clostridium beijerinckii NCIMB 8052 ferredoxin-NADP(+) reductase subunit alpha YP_001308599.1 1727494 D 290402 CDS YP_001308600.1 150016346 5292688 1728384..1729778 1 NC_009617.1 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase 1729778 5292688 Cbei_1466 Clostridium beijerinckii NCIMB 8052 oxidoreductase YP_001308600.1 1728384 D 290402 CDS YP_001308601.1 150016347 5292689 1729997..1730779 1 NC_009617.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: mbu:Mbur_0990 metal-dependent phosphohydrolase; metal dependent phosphohydrolase 1730779 5292689 Cbei_1467 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001308601.1 1729997 D 290402 CDS YP_001308602.1 150016348 5292690 1731169..1732038 1 NC_009617.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: cac:CAC0087 predicted Co/Zn/Cd cation transporter; cation diffusion facilitator family transporter 1732038 5292690 Cbei_1468 Clostridium beijerinckii NCIMB 8052 cation diffusion facilitator family transporter YP_001308602.1 1731169 D 290402 CDS YP_001308603.1 150016349 5292691 1732207..1732659 1 NC_009617.1 KEGG: cpf:CPF_2252 hypothetical protein; hypothetical protein 1732659 5292691 Cbei_1469 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308603.1 1732207 D 290402 CDS YP_001308604.1 150016350 5292692 complement(1732714..1733478) 1 NC_009617.1 PFAM: Extradiol ring-cleavage dioxygenase, class III protein, subunit B; KEGG: btk:BT9727_1700 conserved hypothetical protein, possible oxidoreductase; extradiol ring-cleavage dioxygenase III subunit B 1733478 5292692 Cbei_1470 Clostridium beijerinckii NCIMB 8052 extradiol ring-cleavage dioxygenase III subunit B YP_001308604.1 1732714 R 290402 CDS YP_001308605.1 150016351 5292693 1733667..1733975 1 NC_009617.1 PFAM: helix-turn-helix, HxlR type; KEGG: cac:CAC0849 predicted transcriptional regulator; HxlR family transcriptional regulator 1733975 5292693 Cbei_1471 Clostridium beijerinckii NCIMB 8052 HxlR family transcriptional regulator YP_001308605.1 1733667 D 290402 CDS YP_001308606.1 150016352 5292694 1734309..1734908 1 NC_009617.1 KEGG: bce:BC1952 nitroreductase; nitroreductase 1734908 5292694 Cbei_1472 Clostridium beijerinckii NCIMB 8052 nitroreductase YP_001308606.1 1734309 D 290402 CDS YP_001308607.1 150016353 5296343 complement(1736012..1737469) 1 NC_009617.1 KEGG: tte:TTE2242 transposase; transposase 1737469 5296343 Cbei_1473 Clostridium beijerinckii NCIMB 8052 transposase YP_001308607.1 1736012 R 290402 CDS YP_001308608.1 150016354 5292696 complement(1737852..1739210) 1 NC_009617.1 PFAM: branched-chain amino acid transport system II carrier protein; KEGG: sha:SH0145 hypothetical protein; branched-chain amino acid transport system II carrier protein 1739210 5292696 Cbei_1474 Clostridium beijerinckii NCIMB 8052 branched-chain amino acid transport system II carrier protein YP_001308608.1 1737852 R 290402 CDS YP_001308609.1 150016355 5292697 1739835..1740209 1 NC_009617.1 PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: cac:CAC0383 PTS cellobiose-specific component IIA; PTS system lactose/cellobiose-specific transporter subunit IIA 1740209 5292697 Cbei_1475 Clostridium beijerinckii NCIMB 8052 PTS system lactose/cellobiose-specific transporter subunit IIA YP_001308609.1 1739835 D 290402 CDS YP_001308610.1 150016356 5292698 1740279..1740584 1 NC_009617.1 PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: cac:CAC0384 PTS system, cellobiose-specific component BII; phosphotransferase system, lactose/cellobiose-specific IIB subunit 1740584 5292698 Cbei_1476 Clostridium beijerinckii NCIMB 8052 phosphotransferase system, lactose/cellobiose-specific IIB subunit YP_001308610.1 1740279 D 290402 CDS YP_001308611.1 150016357 5292699 1740626..1742035 1 NC_009617.1 PFAM: glycoside hydrolase, family 1; KEGG: cac:CAC0385 beta-glucosidase; beta-glucosidase 1742035 5292699 Cbei_1477 Clostridium beijerinckii NCIMB 8052 beta-glucosidase YP_001308611.1 1740626 D 290402 CDS YP_001308612.1 150016358 5292700 1742164..1743492 1 NC_009617.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system, EIIC; KEGG: efa:EF0292 PTS system, IIC component; PTS system lactose/cellobiose family transporter subunit IIC 1743492 5292700 Cbei_1478 Clostridium beijerinckii NCIMB 8052 PTS system lactose/cellobiose family transporter subunit IIC YP_001308612.1 1742164 D 290402 CDS YP_001308613.1 150016359 5292701 1743656..1744414 1 NC_009617.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bcl:ABC0711 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 1744414 5292701 Cbei_1479 Clostridium beijerinckii NCIMB 8052 RpiR family transcriptional regulator YP_001308613.1 1743656 D 290402 CDS YP_001308614.1 150016360 5292702 complement(1744554..1745297) 1 NC_009617.1 PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: dsy:DSY2527 hypothetical protein; LytTR family two component transcriptional regulator 1745297 5292702 Cbei_1480 Clostridium beijerinckii NCIMB 8052 LytTR family two component transcriptional regulator YP_001308614.1 1744554 R 290402 CDS YP_001308615.1 150016361 5292703 complement(1745315..1745716) 1 NC_009617.1 hypothetical protein 1745716 5292703 Cbei_1481 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308615.1 1745315 R 290402 CDS YP_001308616.1 150016362 5292704 complement(1745738..1746724) 1 NC_009617.1 PFAM: protein of unknown function DUF1432; KEGG: cth:Cthe_0858 protein of unknown function DUF1432; hypothetical protein 1746724 5292704 Cbei_1482 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308616.1 1745738 R 290402 CDS YP_001308617.1 150016363 5292705 complement(1746751..1747248) 1 NC_009617.1 PFAM: protein of unknown function DUF107; KEGG: cth:Cthe_0857 protein of unknown function DUF107; hypothetical protein 1747248 5292705 Cbei_1483 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308617.1 1746751 R 290402 CDS YP_001308618.1 150016364 5292706 complement(1747395..1748249) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: mta:Moth_1579 signal transduction histidine kinase regulating citrate/malate metabolism; signal transduction histidine kinase regulating citrate/malate metabolism 1748249 5292706 Cbei_1484 Clostridium beijerinckii NCIMB 8052 signal transduction histidine kinase regulating citrate/malate metabolism YP_001308618.1 1747395 R 290402 CDS YP_001308619.1 150016365 5292707 1748808..1750046 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: lsa:LSA0806 N-acetyl transferase, GNAT family; N-acetyltransferase GCN5 1750046 5292707 Cbei_1485 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001308619.1 1748808 D 290402 CDS YP_001308620.1 150016366 5292708 complement(1750387..1751343) 1 NC_009617.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: bat:BAS2249 hypothetical protein; hypothetical protein 1751343 5292708 Cbei_1486 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308620.1 1750387 R 290402 CDS YP_001308621.1 150016367 5296344 1752901..1756155 1 NC_009617.1 PFAM: pentapeptide repeat protein; KEGG: ter:Tery_0271 pentapeptide repeat; pentapeptide repeat-containing protein 1756155 5296344 Cbei_1488 Clostridium beijerinckii NCIMB 8052 pentapeptide repeat-containing protein YP_001308621.1 1752901 D 290402 CDS YP_001308622.1 150016368 5292710 1756557..1757669 1 NC_009617.1 KEGG: plu:plu4347 hypothetical protein; hypothetical protein 1757669 5292710 Cbei_1489 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308622.1 1756557 D 290402 CDS YP_001308623.1 150016369 5292711 1757662..1761852 1 NC_009617.1 KEGG: sao:SAOUHSC_01931 hypothetical protein; hypothetical protein 1761852 5292711 Cbei_1490 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308623.1 1757662 D 290402 CDS YP_001308624.1 150016370 5292712 complement(1761908..1763086) 1 NC_009617.1 PFAM: phage integrase family protein; KEGG: tte:TTE2127 integrase; phage integrase family protein 1763086 5292712 Cbei_1491 Clostridium beijerinckii NCIMB 8052 phage integrase family protein YP_001308624.1 1761908 R 290402 CDS YP_001308625.1 150016371 5292713 complement(1763161..1763751) 1 NC_009617.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 1763751 5292713 Cbei_1492 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001308625.1 1763161 R 290402 CDS YP_001308626.1 150016372 5292714 1763956..1764741 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; cell wall hydrolase/autolysin; KEGG: ava:Ava_4396 peptidoglycan-binding domain 1; cell wall hydrolase/autolysin 1764741 5292714 Cbei_1493 Clostridium beijerinckii NCIMB 8052 cell wall hydrolase/autolysin YP_001308626.1 1763956 D 290402 CDS YP_001308627.1 150016373 5296345 1765729..1766421 1 NC_009617.1 KEGG: cpr:CPR_1247 hypothetical protein; hypothetical protein 1766421 5296345 Cbei_1494 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308627.1 1765729 D 290402 CDS YP_001308628.1 150016374 5292716 1766447..1767448 1 NC_009617.1 KEGG: cpr:CPR_1246 hypothetical protein; hypothetical protein 1767448 5292716 Cbei_1495 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308628.1 1766447 D 290402 CDS YP_001308629.1 150016375 5296346 1769779..1770111 1 NC_009617.1 PFAM: TfoX, N-terminal domain protein; KEGG: cac:CAC2476 uncharacterized protein, homolog of Spirochaeta aurantia (gi:152901); TfoX domain-containing protein 1770111 5296346 Cbei_1497 Clostridium beijerinckii NCIMB 8052 TfoX domain-containing protein YP_001308629.1 1769779 D 290402 CDS YP_001308630.1 150016376 5292718 1770126..1770542 1 NC_009617.1 KEGG: blo:BL0813 hypothetical protein; hypothetical protein 1770542 5292718 Cbei_1498 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308630.1 1770126 D 290402 CDS YP_001308631.1 150016377 5292719 1770542..1770916 1 NC_009617.1 KEGG: ljo:LJ1253 hypothetical protein; hypothetical protein 1770916 5292719 Cbei_1499 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308631.1 1770542 D 290402 CDS YP_001308632.1 150016378 5292720 1771147..1771677 1 NC_009617.1 PFAM: transcriptional regulator PadR family protein; KEGG: mmp:MMP0700 transcriptional regulator PadR-like family; PadR-like family transcriptional regulator 1771677 5292720 Cbei_1500 Clostridium beijerinckii NCIMB 8052 PadR-like family transcriptional regulator YP_001308632.1 1771147 D 290402 CDS YP_001308633.1 150016379 5292721 1771707..1773044 1 NC_009617.1 KEGG: cac:CAC1997 predicted glycosyltransferase; related to UDP-glucuronosyltransferase; glycosyl transferase family protein 1773044 5292721 Cbei_1501 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001308633.1 1771707 D 290402 CDS YP_001308634.1 150016380 5292722 1773060..1773380 1 NC_009617.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: lmo:lmo0661 hypothetical protein; carboxymuconolactone decarboxylase 1773380 5292722 Cbei_1502 Clostridium beijerinckii NCIMB 8052 carboxymuconolactone decarboxylase YP_001308634.1 1773060 D 290402 CDS YP_001308635.1 150016381 5292723 1774189..1774392 1 NC_009617.1 hypothetical protein 1774392 5292723 Cbei_1503 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308635.1 1774189 D 290402 CDS YP_001308636.1 150016382 5292724 1775004..1775801 1 NC_009617.1 PFAM: protein of unknown function DUF124; KEGG: gka:GK2879 hypothetical protein; hypothetical protein 1775801 5292724 Cbei_1504 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308636.1 1775004 D 290402 CDS YP_001308637.1 150016383 5292725 1776063..1777307 1 NC_009617.1 PFAM: natural resistance-associated macrophage protein; KEGG: tte:TTE0686 Mn2+ and Fe2+ transporters of the NRAMP family; natural resistance-associated macrophage protein 1777307 5292725 Cbei_1505 Clostridium beijerinckii NCIMB 8052 natural resistance-associated macrophage protein YP_001308637.1 1776063 D 290402 CDS YP_001308638.1 150016384 5292726 1777662..1778645 1 NC_009617.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: cac:CAC1543 lactate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 1778645 5292726 Cbei_1506 Clostridium beijerinckii NCIMB 8052 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit YP_001308638.1 1777662 D 290402 CDS YP_001308639.1 150016385 5292727 1778738..1779352 1 NC_009617.1 PFAM: manganese and iron superoxide dismutase; KEGG: efa:EF0463 superoxide dismutase, Mn; superoxide dismutase 1779352 5292727 Cbei_1507 Clostridium beijerinckii NCIMB 8052 superoxide dismutase YP_001308639.1 1778738 D 290402 CDS YP_001308640.1 150016386 5292728 complement(1779445..1780545) 1 NC_009617.1 KEGG: cpf:CPF_2899 hypothetical protein; hypothetical protein 1780545 5292728 Cbei_1508 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308640.1 1779445 R 290402 CDS YP_001308641.1 150016387 5292729 complement(1780675..1781391) 1 NC_009617.1 PFAM: protein of unknown function DUF434; KEGG: cac:CAC1606 hypothetical protein; hypothetical protein 1781391 5292729 Cbei_1509 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308641.1 1780675 R 290402 CDS YP_001308642.1 150016388 5292730 complement(1781864..1783534) 1 NC_009617.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 1783534 5292730 Cbei_1510 Clostridium beijerinckii NCIMB 8052 dihydroxy-acid dehydratase YP_001308642.1 1781864 R 290402 CDS YP_001308643.1 150016389 5292731 complement(1783676..1784362) 1 NC_009617.1 PFAM: GntR family transcriptional regulator; GntR domain protein; KEGG: sph:MGAS10270_Spy1173 transcriptional regulator, GntR family; GntR family transcriptional regulator 1784362 5292731 Cbei_1511 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001308643.1 1783676 R 290402 CDS YP_001308644.1 150016390 5292732 complement(1785175..1786113) 1 NC_009617.1 PFAM: Auxin Efflux Carrier; KEGG: tte:TTE0420 predicted permease; auxin efflux carrier 1786113 5292732 Cbei_1512 Clostridium beijerinckii NCIMB 8052 auxin efflux carrier YP_001308644.1 1785175 R 290402 CDS YP_001308645.1 150016391 5292733 complement(1786179..1786859) 1 NC_009617.1 PFAM: GntR family transcriptional regulator; GntR domain protein; KEGG: bld:BLi00487 YdhC; GntR family transcriptional regulator 1786859 5292733 Cbei_1513 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001308645.1 1786179 R 290402 CDS YP_001308646.1 150016392 5292734 complement(1787065..1787250) 1 NC_009617.1 KEGG: cth:Cthe_0921 hypothetical protein; hypothetical protein 1787250 5292734 Cbei_1514 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308646.1 1787065 R 290402 CDS YP_001308647.1 150016393 5292735 1787711..1789753 1 NC_009617.1 PFAM: protein of unknown function DUF255; KEGG: cth:Cthe_0291 protein of unknown function DUF255; hypothetical protein 1789753 5292735 Cbei_1515 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308647.1 1787711 D 290402 CDS YP_001308648.1 150016394 5292736 1790009..1790734 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_0302 ABC transporter ATP-binding protein; ABC transporter 1790734 5292736 Cbei_1516 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001308648.1 1790009 D 290402 CDS YP_001308649.1 150016395 5292737 1790727..1792364 1 NC_009617.1 KEGG: cpr:CPR_0298 uncharacterized membrane protein; hypothetical protein 1792364 5292737 Cbei_1517 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308649.1 1790727 D 290402 CDS YP_001308650.1 150016396 5292738 1792567..1792764 1 NC_009617.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: fnu:FN1756 thiS protein; thiamine biosynthesis protein ThiS 1792764 5292738 Cbei_1518 Clostridium beijerinckii NCIMB 8052 thiamine biosynthesis protein ThiS YP_001308650.1 1792567 D 290402 CDS YP_001308651.1 150016397 5292739 1792970..1793740 1 NC_009617.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 1793740 thiG 5292739 thiG Clostridium beijerinckii NCIMB 8052 thiazole synthase YP_001308651.1 1792970 D 290402 CDS YP_001308652.1 150016398 5292740 1793751..1794911 1 NC_009617.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; thiamine biosynthesis protein ThiH 1794911 thiH 5292740 thiH Clostridium beijerinckii NCIMB 8052 thiamine biosynthesis protein ThiH YP_001308652.1 1793751 D 290402 CDS YP_001308653.1 150016399 5292741 complement(1795087..1795737) 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: cac:CA_P0127 HTH transcriptional regulator TetR family; TetR family transcriptional regulator 1795737 5292741 Cbei_1521 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001308653.1 1795087 R 290402 CDS YP_001308654.1 150016400 5292742 1796024..1797547 1 NC_009617.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: chy:CHY_1864 drug resistance transporter EmrB/QacA family; EmrB/QacA family drug resistance transporter 1797547 5292742 Cbei_1522 Clostridium beijerinckii NCIMB 8052 EmrB/QacA family drug resistance transporter YP_001308654.1 1796024 D 290402 CDS YP_001308655.1 150016401 5292743 1797706..1798170 1 NC_009617.1 PFAM: CBS domain containing protein; KEGG: mth:MTH644 hypothetical protein; hypothetical protein 1798170 5292743 Cbei_1523 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308655.1 1797706 D 290402 CDS YP_001308656.1 150016402 5292744 complement(1798317..1799588) 1 NC_009617.1 PFAM: sodium:dicarboxylate symporter; KEGG: cpf:CPF_0756 proton/sodium-glutamate symporter; sodium:dicarboxylate symporter 1799588 5292744 Cbei_1524 Clostridium beijerinckii NCIMB 8052 sodium:dicarboxylate symporter YP_001308656.1 1798317 R 290402 CDS YP_001308657.1 150016403 5292745 1800639..1801253 1 NC_009617.1 PFAM: protein of unknown function DUF1130; KEGG: cpr:CPR_1069 hypothetical protein; hypothetical protein 1801253 5292745 Cbei_1525 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308657.1 1800639 D 290402 CDS YP_001308658.1 150016404 5292746 1801317..1801814 1 NC_009617.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: cno:NT01CX_1617 ErfK/YbiS/YcfS/YnhG family; ErfK/YbiS/YcfS/YnhG family protein 1801814 5292746 Cbei_1526 Clostridium beijerinckii NCIMB 8052 ErfK/YbiS/YcfS/YnhG family protein YP_001308658.1 1801317 D 290402 CDS YP_001308659.1 150016405 5292747 1802425..1803294 1 NC_009617.1 PFAM: Radical SAM domain protein; KEGG: btl:BALH_4965 possible molybdenum cofactor biosynthesis enzyme; radical SAM domain-containing protein 1803294 5292747 Cbei_1527 Clostridium beijerinckii NCIMB 8052 radical SAM domain-containing protein YP_001308659.1 1802425 D 290402 CDS YP_001308660.1 150016406 5292748 1803311..1804045 1 NC_009617.1 hypothetical protein 1804045 5292748 Cbei_1528 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308660.1 1803311 D 290402 CDS YP_001308661.1 150016407 5292749 1804164..1804733 1 NC_009617.1 KEGG: cpr:CPR_1916 hypothetical protein; hypothetical protein 1804733 5292749 Cbei_1529 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308661.1 1804164 D 290402 CDS YP_001308662.1 150016408 5292750 1804938..1805534 1 NC_009617.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 1805534 ruvA 5292750 ruvA Clostridium beijerinckii NCIMB 8052 Holliday junction DNA helicase RuvA YP_001308662.1 1804938 D 290402 CDS YP_001308663.1 150016409 5292751 1805600..1806643 1 NC_009617.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1806643 ruvB 5292751 ruvB Clostridium beijerinckii NCIMB 8052 Holliday junction DNA helicase RuvB YP_001308663.1 1805600 D 290402 CDS YP_001308664.1 150016410 5292752 1806772..1807797 1 NC_009617.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1807797 queA 5292752 queA Clostridium beijerinckii NCIMB 8052 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_001308664.1 1806772 D 290402 CDS YP_001308665.1 150016411 5292753 1807991..1809127 1 NC_009617.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1809127 tgt 5292753 tgt Clostridium beijerinckii NCIMB 8052 queuine tRNA-ribosyltransferase YP_001308665.1 1807991 D 290402 CDS YP_001308666.1 150016412 5292754 1809288..1809566 1 NC_009617.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 1809566 yajC 5292754 yajC Clostridium beijerinckii NCIMB 8052 preprotein translocase subunit YajC YP_001308666.1 1809288 D 290402 CDS YP_001308667.1 150016413 5292755 1809618..1809986 1 NC_009617.1 KEGG: cac:CAC2280 predicted membrane protein; membrane protein 1809986 5292755 Cbei_1535 Clostridium beijerinckii NCIMB 8052 membrane protein YP_001308667.1 1809618 D 290402 CDS YP_001308668.1 150016414 5292756 1810358..1811623 1 NC_009617.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1811623 secD 5292756 secD Clostridium beijerinckii NCIMB 8052 preprotein translocase subunit SecD YP_001308668.1 1810358 D 290402 CDS YP_001308669.1 150016415 5292757 1811616..1812491 1 NC_009617.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1812491 secF 5292757 secF Clostridium beijerinckii NCIMB 8052 preprotein translocase subunit SecF YP_001308669.1 1811616 D 290402 CDS YP_001308670.1 150016416 5292758 1812615..1813490 1 NC_009617.1 PFAM: phosphoesterase, RecJ domain protein; KEGG: cpe:CPE1940 hypothetical protein; phosphoesterase domain-containing protein 1813490 5292758 Cbei_1538 Clostridium beijerinckii NCIMB 8052 phosphoesterase domain-containing protein YP_001308670.1 1812615 D 290402 CDS YP_001308671.1 150016417 5292759 1813581..1814099 1 NC_009617.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 1814099 5292759 Cbei_1539 Clostridium beijerinckii NCIMB 8052 adenine phosphoribosyltransferase YP_001308671.1 1813581 D 290402 CDS YP_001308672.1 150016418 5292760 1814444..1816660 1 NC_009617.1 KEGG: cpf:CPF_2193 GTP pyrophosphokinase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase, HD region; (p)ppGpp synthetase I SpoT/RelA 1816660 5292760 Cbei_1540 Clostridium beijerinckii NCIMB 8052 (p)ppGpp synthetase I SpoT/RelA YP_001308672.1 1814444 D 290402 CDS YP_001308673.1 150016419 5292761 1816692..1817141 1 NC_009617.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 1817141 5292761 Cbei_1541 Clostridium beijerinckii NCIMB 8052 D-tyrosyl-tRNA(Tyr) deacylase YP_001308673.1 1816692 D 290402 CDS YP_001308674.1 150016420 5292762 1817154..1817750 1 NC_009617.1 PFAM: beta-lactamase domain protein; KEGG: cpr:CPR_1902 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 1817750 5292762 Cbei_1542 Clostridium beijerinckii NCIMB 8052 beta-lactamase domain-containing protein YP_001308674.1 1817154 D 290402 CDS YP_001308675.1 150016421 5292763 1817796..1819223 1 NC_009617.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1819223 5292763 Cbei_1543 Clostridium beijerinckii NCIMB 8052 coproporphyrinogen III oxidase YP_001308675.1 1817796 D 290402 CDS YP_001308676.1 150016422 5292764 1819283..1820536 1 NC_009617.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1820536 hisS 5292764 hisS Clostridium beijerinckii NCIMB 8052 histidyl-tRNA synthetase YP_001308676.1 1819283 D 290402 CDS YP_001308677.1 150016423 5292765 1820568..1822367 1 NC_009617.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 1822367 aspS 5292765 aspS Clostridium beijerinckii NCIMB 8052 aspartyl-tRNA synthetase YP_001308677.1 1820568 D 290402 CDS YP_001308678.1 150016424 5292766 complement(1822502..1823209) 1 NC_009617.1 KEGG: cpf:CPF_2623 hypothetical protein; hypothetical protein 1823209 5292766 Cbei_1546 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308678.1 1822502 R 290402 CDS YP_001308679.1 150016425 5296348 1823963..1824661 1 NC_009617.1 PFAM: protein of unknown function DUF554; KEGG: dsy:DSY5050 hypothetical protein; hypothetical protein 1824661 5296348 Cbei_1549 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308679.1 1823963 D 290402 CDS YP_001308680.1 150016426 5292768 1824720..1825325 1 NC_009617.1 PFAM: protein of unknown function DUF975; KEGG: bce:BC5303 integral membrane protein; hypothetical protein 1825325 5292768 Cbei_1550 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308680.1 1824720 D 290402 CDS YP_001308681.1 150016427 5292769 1825670..1826965 1 NC_009617.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1826965 5292769 Cbei_1551 Clostridium beijerinckii NCIMB 8052 homoserine dehydrogenase YP_001308681.1 1825670 D 290402 CDS YP_001308682.1 150016428 5292770 1827233..1828579 1 NC_009617.1 PFAM: domain of unknown function DUF1745; KEGG: ppd:Ppro_3141 domain of unknown function DUF1745; hypothetical protein 1828579 5292770 Cbei_1552 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308682.1 1827233 D 290402 CDS YP_001308683.1 150016429 5292771 1828656..1830497 1 NC_009617.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; KEGG: cno:NT01CX_0224 sensory transduction histidine kinase; multi-sensor signal transduction histidine kinase 1830497 5292771 Cbei_1553 Clostridium beijerinckii NCIMB 8052 multi-sensor signal transduction histidine kinase YP_001308683.1 1828656 D 290402 CDS YP_001308684.1 150016430 5292772 1831095..1832711 1 NC_009617.1 KEGG: ctc:CTC00795 conserved protein (pathogens); hypothetical protein 1832711 5292772 Cbei_1554 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308684.1 1831095 D 290402 CDS YP_001308685.1 150016431 5292773 1832877..1833032 1 NC_009617.1 KEGG: cno:NT01CX_0353 hypothetical protein; hypothetical protein 1833032 5292773 Cbei_1555 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308685.1 1832877 D 290402 CDS YP_001308686.1 150016432 5292774 complement(1833149..1833301) 1 NC_009617.1 KEGG: cpr:CPR_0425 hypothetical protein; hypothetical protein 1833301 5292774 Cbei_1556 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308686.1 1833149 R 290402 CDS YP_001308687.1 150016433 5292775 complement(1833534..1834013) 1 NC_009617.1 PFAM: transcription factor CarD; KEGG: bca:BCE_4857 transcriptional regulator, CarD family; CarD family transcriptional regulator 1834013 5292775 Cbei_1557 Clostridium beijerinckii NCIMB 8052 CarD family transcriptional regulator YP_001308687.1 1833534 R 290402 CDS YP_001308688.1 150016434 5292776 1834368..1835180 1 NC_009617.1 hypothetical protein 1835180 5292776 Cbei_1558 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308688.1 1834368 D 290402 CDS YP_001308689.1 150016435 5292777 1835368..1835988 1 NC_009617.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 1835988 5292777 Cbei_1559 Clostridium beijerinckii NCIMB 8052 uridine kinase YP_001308689.1 1835368 D 290402 CDS YP_001308690.1 150016436 5292778 1836113..1836778 1 NC_009617.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cth:Cthe_0780 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase 1836778 5292778 Cbei_1560 Clostridium beijerinckii NCIMB 8052 HAD family hydrolase YP_001308690.1 1836113 D 290402 CDS YP_001308691.1 150016437 5292779 1836811..1837425 1 NC_009617.1 KEGG: cpf:CPF_1786 hypothetical protein; hypothetical protein 1837425 5292779 Cbei_1561 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308691.1 1836811 D 290402 CDS YP_001308692.1 150016438 5292780 complement(1837552..1838772) 1 NC_009617.1 catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase 1838772 5292780 Cbei_1562 Clostridium beijerinckii NCIMB 8052 threonine dehydratase YP_001308692.1 1837552 R 290402 CDS YP_001308693.1 150016439 5292781 complement(1839105..1839527) 1 NC_009617.1 KEGG: ctc:CTC00602 hypothetical protein; hypothetical protein 1839527 5292781 Cbei_1563 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308693.1 1839105 R 290402 CDS YP_001308694.1 150016440 5292782 complement(1839850..1841406) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpr:CPR_0136 ATPase component of ABC transporter (two ATPase domains); ABC transporter 1841406 5292782 Cbei_1564 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001308694.1 1839850 R 290402 CDS YP_001308695.1 150016441 5292783 1841872..1842423 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pgi:PG1358 acetyltransferase, GNAT family; N-acetyltransferase GCN5 1842423 5292783 Cbei_1565 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001308695.1 1841872 D 290402 CDS YP_001308696.1 150016442 5292784 1842718..1842900 1 NC_009617.1 hypothetical protein 1842900 5292784 Cbei_1566 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308696.1 1842718 D 290402 CDS YP_001308697.1 150016443 5292785 complement(1843006..1843710) 1 NC_009617.1 KEGG: cpr:CPR_1860 hypothetical protein; hypothetical protein 1843710 5292785 Cbei_1567 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308697.1 1843006 R 290402 CDS YP_001308698.1 150016444 5292786 1843936..1844835 1 NC_009617.1 PFAM: Sporulation protein YtxC; KEGG: cpe:CPE1895 hypothetical protein; sporulation protein YtxC 1844835 5292786 Cbei_1568 Clostridium beijerinckii NCIMB 8052 sporulation protein YtxC YP_001308698.1 1843936 D 290402 CDS YP_001308699.1 150016445 5292787 1844970..1845527 1 NC_009617.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: cpf:CPF_2146 translation initiation factor IF-3; translation initiation factor IF-3 1845527 5292787 Cbei_1569 Clostridium beijerinckii NCIMB 8052 translation initiation factor IF-3 YP_001308699.1 1844970 D 290402 CDS YP_001308700.1 150016446 5292788 1845548..1845745 1 NC_009617.1 PFAM: ribosomal protein L35; KEGG: cno:NT01CX_1762 ribosomal protein L35; 50S ribosomal protein L35 1845745 rpmI 5292788 rpmI Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L35 YP_001308700.1 1845548 D 290402 CDS YP_001308701.1 150016447 5292789 1845774..1846133 1 NC_009617.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1846133 rplT 5292789 rplT Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L20 YP_001308701.1 1845774 D 290402 CDS YP_001308702.1 150016448 5292790 1846234..1847016 1 NC_009617.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; KEGG: cpf:CPF_2141 RNA methyltransferase, TrmH family; tRNA/rRNA methyltransferase SpoU 1847016 5292790 Cbei_1572 Clostridium beijerinckii NCIMB 8052 tRNA/rRNA methyltransferase SpoU YP_001308702.1 1846234 D 290402 CDS YP_001308703.1 150016449 5292791 1847717..1848736 1 NC_009617.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1848736 pheS 5292791 pheS Clostridium beijerinckii NCIMB 8052 phenylalanyl-tRNA synthetase subunit alpha YP_001308703.1 1847717 D 290402 CDS YP_001308704.1 150016450 5292792 1848951..1851329 1 NC_009617.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1851329 pheT 5292792 pheT Clostridium beijerinckii NCIMB 8052 phenylalanyl-tRNA synthetase subunit beta YP_001308704.1 1848951 D 290402 CDS YP_001308705.1 150016451 5292793 1851547..1851975 1 NC_009617.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 1851975 5292793 Cbei_1575 Clostridium beijerinckii NCIMB 8052 cell division protein MraZ YP_001308705.1 1851547 D 290402 CDS YP_001308706.1 150016452 5292794 1851988..1852920 1 NC_009617.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: cpr:CPR_1833 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 1852920 mraW 5292794 mraW Clostridium beijerinckii NCIMB 8052 S-adenosyl-methyltransferase MraW YP_001308706.1 1851988 D 290402 CDS YP_001308707.1 150016453 5292795 1852938..1853468 1 NC_009617.1 KEGG: ctc:CTC01634 hypothetical protein; hypothetical protein 1853468 5292795 Cbei_1577 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308707.1 1852938 D 290402 CDS YP_001308708.1 150016454 5292796 1853613..1855841 1 NC_009617.1 TIGRFAM: stage V sporulation protein D; PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PASTA domain containing protein; KEGG: ctc:CTC01633 stage V sporulation protein D; stage V sporulation protein D 1855841 5292796 Cbei_1578 Clostridium beijerinckii NCIMB 8052 stage V sporulation protein D YP_001308708.1 1853613 D 290402 CDS YP_001308709.1 150016455 5292797 1856073..1858337 1 NC_009617.1 TIGRFAM: stage V sporulation protein D; PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PASTA domain containing protein; KEGG: ctc:CTC01633 stage V sporulation protein D; stage V sporulation protein D 1858337 5292797 Cbei_1579 Clostridium beijerinckii NCIMB 8052 stage V sporulation protein D YP_001308709.1 1856073 D 290402 CDS YP_001308710.1 150016456 5292798 1858635..1860095 1 NC_009617.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1860095 murE 5292798 murE Clostridium beijerinckii NCIMB 8052 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_001308710.1 1858635 D 290402 CDS YP_001308711.1 150016457 5292799 1860192..1861544 1 NC_009617.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; KEGG: cpf:CPF_2115 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 1861544 5292799 Cbei_1581 Clostridium beijerinckii NCIMB 8052 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase YP_001308711.1 1860192 D 290402 CDS YP_001308712.1 150016458 5292800 1861648..1862628 1 NC_009617.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1862628 mraY 5292800 mraY Clostridium beijerinckii NCIMB 8052 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_001308712.1 1861648 D 290402 CDS YP_001308713.1 150016459 5292801 1862658..1863794 1 NC_009617.1 TIGRFAM: cell division protein FtsW; stage V sporulation protein E; PFAM: cell cycle protein; KEGG: cpf:CPF_2113 stage V sporulation protein E; stage V sporulation protein E 1863794 5292801 Cbei_1583 Clostridium beijerinckii NCIMB 8052 stage V sporulation protein E YP_001308713.1 1862658 D 290402 CDS YP_001308714.1 150016460 5292802 1863985..1864746 1 NC_009617.1 PFAM: Polypeptide-transport-associated domain protein, FtsQ-type; KEGG: cpf:CPF_2112 cell division protein FtsQ; polypeptide-transport-associated domain-containing protein 1864746 5292802 Cbei_1584 Clostridium beijerinckii NCIMB 8052 polypeptide-transport-associated domain-containing protein YP_001308714.1 1863985 D 290402 CDS YP_001308715.1 150016461 5292803 1864754..1865482 1 NC_009617.1 PFAM: protein of unknown function DUF881; KEGG: cpr:CPR_1825 hypothetical protein; hypothetical protein 1865482 5292803 Cbei_1585 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308715.1 1864754 D 290402 CDS YP_001308716.1 150016462 5292804 1865495..1865887 1 NC_009617.1 PFAM: protein of unknown function DUF1290; KEGG: ctc:CTC01626 small basic protein; hypothetical protein 1865887 5292804 Cbei_1586 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308716.1 1865495 D 290402 CDS YP_001308717.1 150016463 5292805 1865900..1866634 1 NC_009617.1 PFAM: protein of unknown function DUF881; KEGG: cpf:CPF_2109 hypothetical protein; hypothetical protein 1866634 5292805 Cbei_1587 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308717.1 1865900 D 290402 CDS YP_001308718.1 150016464 5292806 1866727..1867407 1 NC_009617.1 PFAM: alanine racemase domain protein; KEGG: cpf:CPF_2108 conserved hypothetical protein TIGR00044; alanine racemase domain-containing protein 1867407 5292806 Cbei_1588 Clostridium beijerinckii NCIMB 8052 alanine racemase domain-containing protein YP_001308718.1 1866727 D 290402 CDS YP_001308719.1 150016465 5292807 1867400..1867852 1 NC_009617.1 PFAM: protein of unknown function DUF552; KEGG: cpr:CPR_1821 hypothetical protein; hypothetical protein 1867852 5292807 Cbei_1589 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308719.1 1867400 D 290402 CDS YP_001308720.1 150016466 5292808 1867865..1868119 1 NC_009617.1 PFAM: protein of unknown function YGGT; KEGG: dsy:DSY2886 hypothetical protein; hypothetical protein 1868119 5292808 Cbei_1590 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308720.1 1867865 D 290402 CDS YP_001308721.1 150016467 5292809 1868123..1868887 1 NC_009617.1 PFAM: RNA-binding S4 domain protein; KEGG: cpf:CPF_2106 S4 domain protein; RNA-binding S4 domain-containing protein 1868887 5292809 Cbei_1591 Clostridium beijerinckii NCIMB 8052 RNA-binding S4 domain-containing protein YP_001308721.1 1868123 D 290402 CDS YP_001308722.1 150016468 5292810 1868901..1869536 1 NC_009617.1 PFAM: DivIVA family protein; KEGG: cpr:CPR_1819 cell division protein DivIVA; DivIVA family protein 1869536 5292810 Cbei_1592 Clostridium beijerinckii NCIMB 8052 DivIVA family protein YP_001308722.1 1868901 D 290402 CDS YP_001308723.1 150016469 5292811 complement(1869981..1870736) 1 NC_009617.1 PFAM: OmpA/MotB domain protein; KEGG: cac:CAC0305 chemotaxis motility protein B, gene motB; OmpA/MotB domain-containing protein 1870736 5292811 Cbei_1593 Clostridium beijerinckii NCIMB 8052 OmpA/MotB domain-containing protein YP_001308723.1 1869981 R 290402 CDS YP_001308724.1 150016470 5292812 complement(1870749..1871522) 1 NC_009617.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: cac:CAC0304 chemotaxis motility protein A, gene motA; MotA/TolQ/ExbB proton channel 1871522 5292812 Cbei_1594 Clostridium beijerinckii NCIMB 8052 MotA/TolQ/ExbB proton channel YP_001308724.1 1870749 R 290402 CDS YP_001308725.1 150016471 5292813 1871817..1872734 1 NC_009617.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cac:CAC2114 predicted pseudouridylate synthase, YlyB B.subtilis ortholog; RluA family pseudouridine synthase 1872734 5292813 Cbei_1595 Clostridium beijerinckii NCIMB 8052 RluA family pseudouridine synthase YP_001308725.1 1871817 D 290402 CDS YP_001308726.1 150016472 5292814 1872752..1873288 1 NC_009617.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 1873288 5292814 Cbei_1596 Clostridium beijerinckii NCIMB 8052 bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase YP_001308726.1 1872752 D 290402 CDS YP_001308727.1 150016473 5292815 1873312..1874472 1 NC_009617.1 PFAM: RNA methylase; KEGG: cpf:CPF_2102 methyltransferase; RNA methylase 1874472 5292815 Cbei_1597 Clostridium beijerinckii NCIMB 8052 RNA methylase YP_001308727.1 1873312 D 290402 CDS YP_001308728.1 150016474 5292816 1874836..1875681 1 NC_009617.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bha:BH2940 hypothetical protein; RpiR family transcriptional regulator 1875681 5292816 Cbei_1598 Clostridium beijerinckii NCIMB 8052 RpiR family transcriptional regulator YP_001308728.1 1874836 D 290402 CDS YP_001308729.1 150016475 5292817 complement(1875754..1877487) 1 NC_009617.1 PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; KEGG: cpe:CPE1847 probable fibronectin-binding protein; fibronectin-binding A domain-containing protein 1877487 5292817 Cbei_1599 Clostridium beijerinckii NCIMB 8052 fibronectin-binding A domain-containing protein YP_001308729.1 1875754 R 290402 CDS YP_001308730.1 150016476 5292818 1877917..1878744 1 NC_009617.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 1878744 dapF 5292818 dapF Clostridium beijerinckii NCIMB 8052 diaminopimelate epimerase YP_001308730.1 1877917 D 290402 CDS YP_001308731.1 150016477 5292819 1878771..1879778 1 NC_009617.1 KEGG: ctc:CTC01605 hypothetical protein; hypothetical protein 1879778 5292819 Cbei_1601 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308731.1 1878771 D 290402 CDS YP_001308732.1 150016478 5292820 1880025..1880447 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mba:Mbar_A3488 hypothetical protein; N-acetyltransferase GCN5 1880447 5292820 Cbei_1602 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001308732.1 1880025 D 290402 CDS YP_001308733.1 150016479 5292821 1880539..1880760 1 NC_009617.1 hypothetical protein 1880760 5292821 Cbei_1603 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308733.1 1880539 D 290402 CDS YP_001308734.1 150016480 5292822 1880968..1881660 1 NC_009617.1 KEGG: cpf:CPF_2098 pilus biogenesis protein; pilus biogenesis protein 1881660 5292822 Cbei_1604 Clostridium beijerinckii NCIMB 8052 pilus biogenesis protein YP_001308734.1 1880968 D 290402 CDS YP_001308735.1 150016481 5292823 complement(1881634..1883355) 1 NC_009617.1 PFAM: Resolvase, N-terminal domain; Recombinase; KEGG: cac:CAC1951 site-specific recombinases, DNA invertase Pin homolog; resolvase domain-containing protein 1883355 5292823 Cbei_1605 Clostridium beijerinckii NCIMB 8052 resolvase domain-containing protein YP_001308735.1 1881634 R 290402 CDS YP_001308736.1 150016482 5292824 1883821..1888413 1 NC_009617.1 PFAM: Fibronectin, type III domain protein; Haemagluttinin repeat-containing protein; KEGG: cth:Cthe_1235 cellulose 1,4-beta-cellobiosidase; fibronectin type III domain-containing protein 1888413 5292824 Cbei_1606 Clostridium beijerinckii NCIMB 8052 fibronectin type III domain-containing protein YP_001308736.1 1883821 D 290402 CDS YP_001308737.1 150016483 5292825 1888646..1888879 1 NC_009617.1 KEGG: cac:CA_P0101 hypothetical protein; hypothetical protein 1888879 5292825 Cbei_1607 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308737.1 1888646 D 290402 CDS YP_001308738.1 150016484 5292826 1890001..1891098 1 NC_009617.1 hypothetical protein 1891098 5292826 Cbei_1608 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308738.1 1890001 D 290402 CDS YP_001308739.1 150016485 5292827 1891159..1891815 1 NC_009617.1 hypothetical protein 1891815 5292827 Cbei_1609 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308739.1 1891159 D 290402 CDS YP_001308740.1 150016486 5292828 1891860..1892312 1 NC_009617.1 KEGG: vvy:VV1763 hypothetical protein; hypothetical protein 1892312 5292828 Cbei_1610 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308740.1 1891860 D 290402 CDS YP_001308741.1 150016487 5292829 1892424..1893707 1 NC_009617.1 PFAM: Ion transport 2 domain protein; KEGG: hch:HCH_00361 uncharacterized low-complexity protein; Ion transport 2 domain-containing protein 1893707 5292829 Cbei_1611 Clostridium beijerinckii NCIMB 8052 Ion transport 2 domain-containing protein YP_001308741.1 1892424 D 290402 CDS YP_001308742.1 150016488 5292830 1893890..1896151 1 NC_009617.1 PFAM: SEC-C motif domain protein; KEGG: ehi:112.t00003 hypothetical protein Pfam: Prefoldin_2 U3_assoc_6 PROSITE: ASN_RICH GLU_RICH LYS_RICH; SecC motif-containing protein 1896151 5292830 Cbei_1612 Clostridium beijerinckii NCIMB 8052 SecC motif-containing protein YP_001308742.1 1893890 D 290402 CDS YP_001308743.1 150016489 5292831 1896306..1897697 1 NC_009617.1 KEGG: psb:Psyr_1263 ATPas; hypothetical protein 1897697 5292831 Cbei_1613 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308743.1 1896306 D 290402 CDS YP_001308744.1 150016490 5292832 1897887..1901114 1 NC_009617.1 KEGG: mma:MM2421 chaperone protein; hypothetical protein 1901114 5292832 Cbei_1614 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308744.1 1897887 D 290402 CDS YP_001308745.1 150016491 5292833 complement(1901502..1901873) 1 NC_009617.1 PFAM: helix-turn-helix domain protein; KEGG: gka:GK0493 transcriptional regulator; helix-turn-helix domain-containing protein 1901873 5292833 Cbei_1615 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001308745.1 1901502 R 290402 CDS YP_001308746.1 150016492 5292834 1902010..1902237 1 NC_009617.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 1902237 5292834 Cbei_1616 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001308746.1 1902010 D 290402 CDS YP_001308747.1 150016493 5292835 1902390..1902899 1 NC_009617.1 KEGG: cpf:CPF_1602 hypothetical protein; hypothetical protein 1902899 5292835 Cbei_1617 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308747.1 1902390 D 290402 CDS YP_001308748.1 150016494 5292836 1903072..1903413 1 NC_009617.1 hypothetical protein 1903413 5292836 Cbei_1618 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308748.1 1903072 D 290402 CDS YP_001308749.1 150016495 5292837 1903394..1905385 1 NC_009617.1 KEGG: gfo:orf2459 hypothetical protein; hypothetical protein 1905385 5292837 Cbei_1619 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308749.1 1903394 D 290402 CDS YP_001308750.1 150016496 5292838 1905439..1905855 1 NC_009617.1 hypothetical protein 1905855 5292838 Cbei_1620 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308750.1 1905439 D 290402 CDS YP_001308751.1 150016497 5292839 1905855..1906775 1 NC_009617.1 PFAM: RecT protein; KEGG: sau:SA1794 hypothetical protein; RecT protein 1906775 5292839 Cbei_1621 Clostridium beijerinckii NCIMB 8052 RecT protein YP_001308751.1 1905855 D 290402 CDS YP_001308752.1 150016498 5292840 1906775..1907482 1 NC_009617.1 PFAM: beta-lactamase domain protein; KEGG: lin:lin1754 hypothetical protein; beta-lactamase domain-containing protein 1907482 5292840 Cbei_1622 Clostridium beijerinckii NCIMB 8052 beta-lactamase domain-containing protein YP_001308752.1 1906775 D 290402 CDS YP_001308753.1 150016499 5292841 1907510..1908370 1 NC_009617.1 TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: lin:lin1753 hypothetical protein; primosome subunit DnaD 1908370 5292841 Cbei_1623 Clostridium beijerinckii NCIMB 8052 primosome subunit DnaD YP_001308753.1 1907510 D 290402 CDS YP_001308754.1 150016500 5292842 1908363..1909130 1 NC_009617.1 KEGG: cno:NT01CX_2185 hypothetical protein; hypothetical protein 1909130 5292842 Cbei_1624 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308754.1 1908363 D 290402 CDS YP_001308755.1 150016501 5292843 1909288..1909500 1 NC_009617.1 hypothetical protein 1909500 5292843 Cbei_1625 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308755.1 1909288 D 290402 CDS YP_001308756.1 150016502 5292844 1909516..1909944 1 NC_009617.1 PFAM: protein of unknown function DUF1064; KEGG: ctc:CTC01079 hypothetical protein; hypothetical protein 1909944 5292844 Cbei_1626 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308756.1 1909516 D 290402 CDS YP_001308757.1 150016503 5292845 1909948..1910592 1 NC_009617.1 KEGG: ctc:CTC01080 hypothetical protein; hypothetical protein 1910592 5292845 Cbei_1627 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308757.1 1909948 D 290402 CDS YP_001308758.1 150016504 5292846 1910669..1910836 1 NC_009617.1 hypothetical protein 1910836 5292846 Cbei_1628 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308758.1 1910669 D 290402 CDS YP_001308759.1 150016505 5292847 1910951..1911472 1 NC_009617.1 KEGG: ctc:CTC02136 hypothetical protein; hypothetical protein 1911472 5292847 Cbei_1629 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308759.1 1910951 D 290402 CDS YP_001308760.1 150016506 5292848 1911552..1912736 1 NC_009617.1 KEGG: dps:DP1578 hypothetical protein; hypothetical protein 1912736 5292848 Cbei_1630 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308760.1 1911552 D 290402 CDS YP_001308761.1 150016507 5292849 1912911..1913603 1 NC_009617.1 hypothetical protein 1913603 5292849 Cbei_1631 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308761.1 1912911 D 290402 CDS YP_001308762.1 150016508 5292850 1913872..1915104 1 NC_009617.1 PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; KEGG: spj:MGAS2096_Spy0574 chromosome partitioning protein ParB / adenine-specific methyltransferase; DNA methylase N-4/N-6 domain-containing protein 1915104 5292850 Cbei_1632 Clostridium beijerinckii NCIMB 8052 DNA methylase N-4/N-6 domain-containing protein YP_001308762.1 1913872 D 290402 CDS YP_001308763.1 150016509 5292851 1915185..1915496 1 NC_009617.1 KEGG: cth:Cthe_1725 hypothetical protein; hypothetical protein 1915496 5292851 Cbei_1633 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308763.1 1915185 D 290402 CDS YP_001308764.1 150016510 5292852 1915557..1915940 1 NC_009617.1 KEGG: bha:BH3534 hypothetical protein; hypothetical protein 1915940 5292852 Cbei_1634 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308764.1 1915557 D 290402 CDS YP_001308765.1 150016511 5292853 1915963..1916745 1 NC_009617.1 KEGG: bsu:BG11270 similar to phage-related terminase small subunit; phage-related terminase small subunit-like protein 1916745 5292853 Cbei_1635 Clostridium beijerinckii NCIMB 8052 phage-related terminase small subunit-like protein YP_001308765.1 1915963 D 290402 CDS YP_001308766.1 150016512 5292854 1916738..1918150 1 NC_009617.1 KEGG: rru:Rru_A2590 hypothetical protein; hypothetical protein 1918150 5292854 Cbei_1636 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308766.1 1916738 D 290402 CDS YP_001308767.1 150016513 5292855 1918141..1919640 1 NC_009617.1 hypothetical protein 1919640 5292855 Cbei_1637 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308767.1 1918141 D 290402 CDS YP_001308768.1 150016514 5292856 1919633..1920643 1 NC_009617.1 KEGG: gfo:orf2413 hypothetical protein; hypothetical protein 1920643 5292856 Cbei_1638 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308768.1 1919633 D 290402 CDS YP_001308769.1 150016515 5292857 1920769..1922163 1 NC_009617.1 hypothetical protein 1922163 5292857 Cbei_1639 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308769.1 1920769 D 290402 CDS YP_001308770.1 150016516 5292858 1922182..1922559 1 NC_009617.1 hypothetical protein 1922559 5292858 Cbei_1640 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308770.1 1922182 D 290402 CDS YP_001308771.1 150016517 5292859 1922585..1923622 1 NC_009617.1 hypothetical protein 1923622 5292859 Cbei_1641 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308771.1 1922585 D 290402 CDS YP_001308772.1 150016518 5292860 1923650..1923982 1 NC_009617.1 hypothetical protein 1923982 5292860 Cbei_1642 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308772.1 1923650 D 290402 CDS YP_001308773.1 150016519 5292861 1924201..1924356 1 NC_009617.1 hypothetical protein 1924356 5292861 Cbei_1643 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308773.1 1924201 D 290402 CDS YP_001308774.1 150016520 5292862 1924370..1924774 1 NC_009617.1 hypothetical protein 1924774 5292862 Cbei_1644 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308774.1 1924370 D 290402 CDS YP_001308775.1 150016521 5292863 1924782..1925612 1 NC_009617.1 hypothetical protein 1925612 5292863 Cbei_1645 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308775.1 1924782 D 290402 CDS YP_001308776.1 150016522 5292864 1925618..1925941 1 NC_009617.1 hypothetical protein 1925941 5292864 Cbei_1646 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308776.1 1925618 D 290402 CDS YP_001308777.1 150016523 5292865 1925941..1927383 1 NC_009617.1 KEGG: dsy:DSY3957 hypothetical protein; hypothetical protein 1927383 5292865 Cbei_1647 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308777.1 1925941 D 290402 CDS YP_001308778.1 150016524 5292866 1927403..1927819 1 NC_009617.1 KEGG: ctc:CTC02124 phage-like element pbsx protein XkdM; hypothetical protein 1927819 5292866 Cbei_1648 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308778.1 1927403 D 290402 CDS YP_001308779.1 150016525 5292867 1927891..1928322 1 NC_009617.1 PFAM: Phage XkdN-like protein; Phage XkdN-like protein 1928322 5292867 Cbei_1649 Clostridium beijerinckii NCIMB 8052 Phage XkdN-like protein YP_001308779.1 1927891 D 290402 CDS YP_001308780.1 150016526 5292868 1928495..1932220 1 NC_009617.1 TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: gka:GK0539 bacteriophage-related protein; TP901 family phage tail tape measure protein 1932220 5292868 Cbei_1650 Clostridium beijerinckii NCIMB 8052 TP901 family phage tail tape measure protein YP_001308780.1 1928495 D 290402 CDS YP_001308781.1 150016527 5292869 1932641..1933459 1 NC_009617.1 hypothetical protein 1933459 5292869 Cbei_1651 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308781.1 1932641 D 290402 CDS YP_001308782.1 150016528 5292870 1933556..1934242 1 NC_009617.1 PFAM: SH3, type 3 domain protein; SMART: SH3 domain protein domain protein; KEGG: lin:lin1283 hypothetical protein; SH3 type 3 domain-containing protein 1934242 5292870 Cbei_1652 Clostridium beijerinckii NCIMB 8052 SH3 type 3 domain-containing protein YP_001308782.1 1933556 D 290402 CDS YP_001308783.1 150016529 5292871 1934247..1935263 1 NC_009617.1 KEGG: bld:BLi01343 YqbQ; hypothetical protein 1935263 5292871 Cbei_1653 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308783.1 1934247 D 290402 CDS YP_001308784.1 150016530 5292872 1935256..1935603 1 NC_009617.1 hypothetical protein 1935603 5292872 Cbei_1654 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308784.1 1935256 D 290402 CDS YP_001308785.1 150016531 5292873 1935596..1936036 1 NC_009617.1 KEGG: lin:lin1286 hypothetical protein; hypothetical protein 1936036 5292873 Cbei_1655 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308785.1 1935596 D 290402 CDS YP_001308786.1 150016532 5292874 1936041..1937144 1 NC_009617.1 PFAM: Baseplate J family protein; KEGG: ctc:CTC02115 phage-like element pbsx protein XkdT; baseplate J family protein 1937144 5292874 Cbei_1656 Clostridium beijerinckii NCIMB 8052 baseplate J family protein YP_001308786.1 1936041 D 290402 CDS YP_001308787.1 150016533 5292875 1937145..1939004 1 NC_009617.1 KEGG: ctc:CTC02114 hypothetical protein; hypothetical protein 1939004 5292875 Cbei_1657 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308787.1 1937145 D 290402 CDS YP_001308788.1 150016534 5292876 1939006..1939620 1 NC_009617.1 KEGG: ctc:CTC02112 phage-like element pbsx protein XkdT; phage-like element pbsx protein XkdT 1939620 5292876 Cbei_1658 Clostridium beijerinckii NCIMB 8052 phage-like element pbsx protein XkdT YP_001308788.1 1939006 D 290402 CDS YP_001308789.1 150016535 5292877 1939634..1940779 1 NC_009617.1 hypothetical protein 1940779 5292877 Cbei_1659 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308789.1 1939634 D 290402 CDS YP_001308790.1 150016536 5292878 1940807..1941079 1 NC_009617.1 hypothetical protein 1941079 5292878 Cbei_1660 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308790.1 1940807 D 290402 CDS YP_001308791.1 150016537 5292879 1941072..1941287 1 NC_009617.1 hypothetical protein 1941287 5292879 Cbei_1661 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308791.1 1941072 D 290402 CDS YP_001308792.1 150016538 5292880 1941547..1942719 1 NC_009617.1 TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; Ig domain protein, group 2 domain protein; KEGG: cac:CAC2107 contains cell adhesion domain; hypothetical protein 1942719 5292880 Cbei_1662 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308792.1 1941547 D 290402 CDS YP_001308793.1 150016539 5292881 1942761..1943831 1 NC_009617.1 PFAM: Ig domain protein, group 2 domain protein; KEGG: cac:CAC2107 contains cell adhesion domain; Ig domain-containing protein 1943831 5292881 Cbei_1663 Clostridium beijerinckii NCIMB 8052 Ig domain-containing protein YP_001308793.1 1942761 D 290402 CDS YP_001308794.1 150016540 5292882 1943912..1944148 1 NC_009617.1 KEGG: cpr:CPR_C0053 hypothetical protein; hypothetical protein 1944148 5292882 Cbei_1664 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308794.1 1943912 D 290402 CDS YP_001308795.1 150016541 5292883 1944164..1944604 1 NC_009617.1 KEGG: cpf:CPF_0972 hypothetical protein; hypothetical protein 1944604 5292883 Cbei_1665 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308795.1 1944164 D 290402 CDS YP_001308796.1 150016542 5292884 1944668..1945453 1 NC_009617.1 PFAM: glycoside hydrolase, family 25; KEGG: cpr:CPR_C0050 autolytic lysozyme; glycoside hydrolase 1945453 5292884 Cbei_1666 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001308796.1 1944668 D 290402 CDS YP_001308797.1 150016543 5292885 1945571..1946410 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 3; KEGG: bja:blr2224 ABC transporter amino acid-binding protein; extracellular solute-binding protein 1946410 5292885 Cbei_1667 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001308797.1 1945571 D 290402 CDS YP_001308798.1 150016544 5292886 complement(1946658..1947701) 1 NC_009617.1 KEGG: cpr:CPR_1341 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein 1947701 5292886 Cbei_1668 Clostridium beijerinckii NCIMB 8052 D-galactose-binding periplasmic protein YP_001308798.1 1946658 R 290402 CDS YP_001308799.1 150016545 5292887 complement(1947754..1948122) 1 NC_009617.1 hypothetical protein 1948122 5292887 Cbei_1669 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308799.1 1947754 R 290402 CDS YP_001308800.1 150016546 5292888 1948640..1949524 1 NC_009617.1 KEGG: ctc:CTC01990 transposase; hypothetical protein 1949524 5292888 Cbei_1670 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308800.1 1948640 D 290402 CDS YP_001308801.1 150016547 5296349 1950460..1950663 1 NC_009617.1 hypothetical protein 1950663 5296349 Cbei_1672 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308801.1 1950460 D 290402 CDS YP_001308802.1 150016548 5292890 1950885..1951034 1 NC_009617.1 hypothetical protein 1951034 5292890 Cbei_1673 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308802.1 1950885 D 290402 CDS YP_001308803.1 150016549 5292891 1951993..1952406 1 NC_009617.1 KEGG: cac:CAC1318 hypothetical protein; hypothetical protein 1952406 5292891 Cbei_1674 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308803.1 1951993 D 290402 CDS YP_001308804.1 150016550 5292892 1953040..1953489 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_0357 choline binding protein F; cell wall binding repeat-containing protein 1953489 5292892 Cbei_1675 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001308804.1 1953040 D 290402 CDS YP_001308805.1 150016551 5292893 1953652..1954599 1 NC_009617.1 PFAM: beta-lactamase domain protein; KEGG: ctc:CTC01364 hypothetical membrane spanning protein; beta-lactamase domain-containing protein 1954599 5292893 Cbei_1676 Clostridium beijerinckii NCIMB 8052 beta-lactamase domain-containing protein YP_001308805.1 1953652 D 290402 CDS YP_001308806.1 150016552 5292894 1954992..1955183 1 NC_009617.1 hypothetical protein 1955183 5292894 Cbei_1677 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308806.1 1954992 D 290402 CDS YP_001308807.1 150016553 5292895 1955372..1955599 1 NC_009617.1 XRE family transcriptional regulator 1955599 5292895 Cbei_1678 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001308807.1 1955372 D 290402 CDS YP_001308808.1 150016554 5292896 1955849..1956526 1 NC_009617.1 PFAM: MgtC/SapB transporter; KEGG: cac:CAC3658 uncharacterized conserved membrane protein, SapB/MtgC family; MgtC/SapB transporter 1956526 5292896 Cbei_1679 Clostridium beijerinckii NCIMB 8052 MgtC/SapB transporter YP_001308808.1 1955849 D 290402 CDS YP_001308809.1 150016555 5292897 1956874..1957275 1 NC_009617.1 hypothetical protein 1957275 5292897 Cbei_1680 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308809.1 1956874 D 290402 CDS YP_001308810.1 150016556 5296350 1958399..1959514 1 NC_009617.1 PFAM: type II secretion system protein; KEGG: aae:aq_747 fimbrial assembly protein PilC; type II secretion system protein 1959514 5296350 Cbei_1682 Clostridium beijerinckii NCIMB 8052 type II secretion system protein YP_001308810.1 1958399 D 290402 CDS YP_001308811.1 150016557 5292899 1959511..1959957 1 NC_009617.1 hypothetical protein 1959957 5292899 Cbei_1683 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308811.1 1959511 D 290402 CDS YP_001308812.1 150016558 5292900 1959954..1960379 1 NC_009617.1 hypothetical protein 1960379 5292900 Cbei_1684 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308812.1 1959954 D 290402 CDS YP_001308813.1 150016559 5292901 1960369..1960833 1 NC_009617.1 KEGG: cac:CAC2100 hypothetical protein; hypothetical protein 1960833 5292901 Cbei_1685 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308813.1 1960369 D 290402 CDS YP_001308814.1 150016560 5292902 1960863..1961246 1 NC_009617.1 hypothetical protein 1961246 5292902 Cbei_1686 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308814.1 1960863 D 290402 CDS YP_001308815.1 150016561 5292903 1961311..1961976 1 NC_009617.1 hypothetical protein 1961976 5292903 Cbei_1687 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308815.1 1961311 D 290402 CDS YP_001308816.1 150016562 5292904 1961987..1962337 1 NC_009617.1 hypothetical protein 1962337 5292904 Cbei_1688 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308816.1 1961987 D 290402 CDS YP_001308817.1 150016563 5292905 1962330..1962698 1 NC_009617.1 hypothetical protein 1962698 5292905 Cbei_1689 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308817.1 1962330 D 290402 CDS YP_001308818.1 150016564 5292906 1962989..1963579 1 NC_009617.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 1963579 5292906 Cbei_1690 Clostridium beijerinckii NCIMB 8052 elongation factor P YP_001308818.1 1962989 D 290402 CDS YP_001308819.1 150016565 5292907 1963670..1964035 1 NC_009617.1 KEGG: cpf:CPF_2088 hypothetical protein; hypothetical protein 1964035 5292907 Cbei_1691 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308819.1 1963670 D 290402 CDS YP_001308820.1 150016566 5292908 1964190..1965110 1 NC_009617.1 TIGRFAM: Sporulation stage III, protein AA; SMART: ATPase AAA; KEGG: cpr:CPR_1801 stage III sporulation protein AA; sporulation stage III, protein AA 1965110 5292908 Cbei_1692 Clostridium beijerinckii NCIMB 8052 sporulation stage III, protein AA YP_001308820.1 1964190 D 290402 CDS YP_001308821.1 150016567 5292909 1965098..1965616 1 NC_009617.1 necessary for complete engulfment of forespore; stage III sporulation protein SpoAB 1965616 5292909 Cbei_1693 Clostridium beijerinckii NCIMB 8052 stage III sporulation protein SpoAB YP_001308821.1 1965098 D 290402 CDS YP_001308822.1 150016568 5292910 1965681..1965878 1 NC_009617.1 PFAM: Stage III sporulation AC family protein; KEGG: cac:CAC2091 stage III sporulation protein AC, SpoIIIAC; stage III sporulation AC family protein 1965878 5292910 Cbei_1694 Clostridium beijerinckii NCIMB 8052 stage III sporulation AC family protein YP_001308822.1 1965681 D 290402 CDS YP_001308823.1 150016569 5292911 1965890..1966273 1 NC_009617.1 TIGRFAM: Sporulation stage III, protein AD; KEGG: cno:NT01CX_1972 stage III sporulation protein AD, SpoIIIAD; sporulation stage III, protein AD 1966273 5292911 Cbei_1695 Clostridium beijerinckii NCIMB 8052 sporulation stage III, protein AD YP_001308823.1 1965890 D 290402 CDS YP_001308824.1 150016570 5292912 1966284..1967573 1 NC_009617.1 TIGRFAM: Sporulation stage III, protein AE; KEGG: cpf:CPF_2083 stage III sporulation protein AE; sporulation stage III, protein AE 1967573 5292912 Cbei_1696 Clostridium beijerinckii NCIMB 8052 sporulation stage III, protein AE YP_001308824.1 1966284 D 290402 CDS YP_001308825.1 150016571 5292913 1967580..1968179 1 NC_009617.1 TIGRFAM: Sporulation stage III, protein AF; KEGG: cac:CAC2088 stage III sporulation protein AF, SpoIIIAF; sporulation stage III, protein AF 1968179 5292913 Cbei_1697 Clostridium beijerinckii NCIMB 8052 sporulation stage III, protein AF YP_001308825.1 1967580 D 290402 CDS YP_001308826.1 150016572 5292914 1968191..1968811 1 NC_009617.1 TIGRFAM: Sporulation stage III, protein AG; KEGG: cpe:CPE1827 stage III sporulation protein AG; sporulation stage III, protein AG 1968811 5292914 Cbei_1698 Clostridium beijerinckii NCIMB 8052 sporulation stage III, protein AG YP_001308826.1 1968191 D 290402 CDS YP_001308827.1 150016573 5292915 1968851..1969366 1 NC_009617.1 KEGG: cpr:CPR_1794 stage III sporulation protein AH; stage III sporulation protein AH 1969366 5292915 Cbei_1699 Clostridium beijerinckii NCIMB 8052 stage III sporulation protein AH YP_001308827.1 1968851 D 290402 CDS YP_001308828.1 150016574 5292916 1969468..1969848 1 NC_009617.1 PFAM: protein of unknown function DUF322; KEGG: cac:CAC2085 uncharacterized protein from alkaline shock protein family, YQHY B.subtilis ortholog; hypothetical protein 1969848 5292916 Cbei_1700 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308828.1 1969468 D 290402 CDS YP_001308829.1 150016575 5292917 1969980..1970381 1 NC_009617.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: cpr:CPR_1792 N utilization substance protein B; NusB antitermination factor 1970381 5292917 Cbei_1701 Clostridium beijerinckii NCIMB 8052 NusB antitermination factor YP_001308829.1 1969980 D 290402 CDS YP_001308830.1 150016576 5292918 1970509..1971357 1 NC_009617.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 1971357 5292918 Cbei_1702 Clostridium beijerinckii NCIMB 8052 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_001308830.1 1970509 D 290402 CDS YP_001308831.1 150016577 5292919 1971347..1972546 1 NC_009617.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1972546 xseA 5292919 xseA Clostridium beijerinckii NCIMB 8052 exodeoxyribonuclease VII large subunit YP_001308831.1 1971347 D 290402 CDS YP_001308832.1 150016578 5292920 1972559..1972783 1 NC_009617.1 PFAM: Exonuclease VII, small subunit; KEGG: cno:NT01CX_1981 exodeoxyribonuclease VII, small subunit; exonuclease VII, small subunit 1972783 5292920 Cbei_1704 Clostridium beijerinckii NCIMB 8052 exonuclease VII, small subunit YP_001308832.1 1972559 D 290402 CDS YP_001308833.1 150016579 5292921 1972770..1973639 1 NC_009617.1 PFAM: Polyprenyl synthetase; KEGG: cno:NT01CX_1982 geranyltranstransferase; polyprenyl synthetase 1973639 5292921 Cbei_1705 Clostridium beijerinckii NCIMB 8052 polyprenyl synthetase YP_001308833.1 1972770 D 290402 CDS YP_001308834.1 150016580 5292922 1973657..1975513 1 NC_009617.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1975513 5292922 Cbei_1706 Clostridium beijerinckii NCIMB 8052 1-deoxy-D-xylulose-5-phosphate synthase YP_001308834.1 1973657 D 290402 CDS YP_001308835.1 150016581 5292923 1975526..1976335 1 NC_009617.1 TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: cno:NT01CX_1984 hemolysin A; hemolysin A 1976335 5292923 Cbei_1707 Clostridium beijerinckii NCIMB 8052 hemolysin A YP_001308835.1 1975526 D 290402 CDS YP_001308836.1 150016582 5292924 1976352..1977206 1 NC_009617.1 PFAM: ATP-NAD/AcoX kinase; KEGG: cpe:CPE1817 NAD+ kinase; ATP-NAD/AcoX kinase 1977206 5292924 Cbei_1708 Clostridium beijerinckii NCIMB 8052 ATP-NAD/AcoX kinase YP_001308836.1 1976352 D 290402 CDS YP_001308837.1 150016583 5292925 1977203..1977655 1 NC_009617.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor 1977655 argR 5292925 argR Clostridium beijerinckii NCIMB 8052 arginine repressor YP_001308837.1 1977203 D 290402 CDS YP_001308838.1 150016584 5292926 1977675..1979363 1 NC_009617.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: cpr:CPR_1783 DNA repair protein RecN; DNA repair protein RecN 1979363 5292926 Cbei_1710 Clostridium beijerinckii NCIMB 8052 DNA repair protein RecN YP_001308838.1 1977675 D 290402 CDS YP_001308839.1 150016585 5292927 1979592..1980782 1 NC_009617.1 TIGRFAM: Peptidase S55, sporulation stage IV, protein B; PFAM: PDZ/DHR/GLGF domain protein; peptidase S55, SpoIVB; KEGG: cpe:CPE1814 stage IV sporulation protein B; peptidase S55, sporulation stage IV, protein B 1980782 5292927 Cbei_1711 Clostridium beijerinckii NCIMB 8052 peptidase S55, sporulation stage IV, protein B YP_001308839.1 1979592 D 290402 CDS YP_001308840.1 150016586 5292928 1981390..1982211 1 NC_009617.1 TIGRFAM: Sporulation response regulator, Spo0A; PFAM: response regulator receiver; Sporulation initiation factor Spo0A-like; KEGG: cpf:CPF_2067 Spo0A protein; response regulator receiver protein 1982211 5292928 Cbei_1712 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001308840.1 1981390 D 290402 CDS YP_001308841.1 150016587 5292929 1983097..1983504 1 NC_009617.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ppd:Ppro_3068 hemerythrin-like metal-binding protein; hemerythrin-like metal-binding protein 1983504 5292929 Cbei_1713 Clostridium beijerinckii NCIMB 8052 hemerythrin-like metal-binding protein YP_001308841.1 1983097 D 290402 CDS YP_001308842.1 150016588 5292930 1983913..1984140 1 NC_009617.1 hypothetical protein 1984140 5292930 Cbei_1714 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308842.1 1983913 D 290402 CDS YP_001308843.1 150016589 5292931 1984491..1985786 1 NC_009617.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: cpf:CPF_1756 uracil permease; uracil transporter 1985786 5292931 Cbei_1715 Clostridium beijerinckii NCIMB 8052 uracil transporter YP_001308843.1 1984491 D 290402 CDS YP_001308844.1 150016590 5292932 1985966..1986607 1 NC_009617.1 KEGG: bce:BC3526 collagen adhesion protein; hypothetical protein 1986607 5292932 Cbei_1716 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308844.1 1985966 D 290402 CDS YP_001308845.1 150016591 5292933 1986791..1987192 1 NC_009617.1 KEGG: cth:Cthe_1644 hypothetical protein; hypothetical protein 1987192 5292933 Cbei_1717 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308845.1 1986791 D 290402 CDS YP_001308846.1 150016592 5292934 1987231..1988241 1 NC_009617.1 KEGG: cpr:CPR_0353 prophage ps3 protein 01; prophage ps3 protein 01 1988241 5292934 Cbei_1718 Clostridium beijerinckii NCIMB 8052 prophage ps3 protein 01 YP_001308846.1 1987231 D 290402 CDS YP_001308847.1 150016593 5292935 1988267..1988878 1 NC_009617.1 PFAM: Phosphoglycerate mutase; KEGG: cac:CAC3021 possible phosphoglycerate mutase; phosphoglycerate mutase 1988878 5292935 Cbei_1719 Clostridium beijerinckii NCIMB 8052 phosphoglycerate mutase YP_001308847.1 1988267 D 290402 CDS YP_001308848.1 150016594 5292936 1989056..1989499 1 NC_009617.1 KEGG: swo:Swol_1844 hypothetical protein; hypothetical protein 1989499 5292936 Cbei_1720 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308848.1 1989056 D 290402 CDS YP_001308849.1 150016595 5292937 1989569..1990213 1 NC_009617.1 PFAM: metallophosphoesterase; KEGG: mma:MM3285 hypothetical protein; metallophosphoesterase 1990213 5292937 Cbei_1721 Clostridium beijerinckii NCIMB 8052 metallophosphoesterase YP_001308849.1 1989569 D 290402 CDS YP_001308850.1 150016596 5292938 1990689..1991855 1 NC_009617.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: cpf:CPF_1465 NADPH-dependent butanol dehydrogenase; iron-containing alcohol dehydrogenase 1991855 5292938 Cbei_1722 Clostridium beijerinckii NCIMB 8052 iron-containing alcohol dehydrogenase YP_001308850.1 1990689 D 290402 CDS YP_001308851.1 150016597 5292939 1992278..1993996 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cno:NT01CX_0316 membrane assosiated methyl-accepting chemotaxis protein with HAMP domain; methyl-accepting chemotaxis sensory transducer 1993996 5292939 Cbei_1723 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001308851.1 1992278 D 290402 CDS YP_001308852.1 150016598 5292940 1994297..1995283 1 NC_009617.1 PFAM: glycosyl transferase, family 2; KEGG: cac:CAC3661 glycosyltransferase; glycosyl transferase family protein 1995283 5292940 Cbei_1724 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001308852.1 1994297 D 290402 CDS YP_001308853.1 150016599 5292941 1995297..1997516 1 NC_009617.1 PFAM: glycosyl transferase, family 39; KEGG: cac:CAC2251 uncharacterized conserved membrane protein, affecting LPS biosynthesis; glycosyl transferase family protein 1997516 5292941 Cbei_1725 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001308853.1 1995297 D 290402 CDS YP_001308854.1 150016600 5292942 1997892..1999643 1 NC_009617.1 KEGG: cac:CAC0354 uncharacterized membrane protein; hypothetical protein 1999643 5292942 Cbei_1726 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308854.1 1997892 D 290402 CDS YP_001308855.1 150016601 5292943 1999640..2000530 1 NC_009617.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: cno:NT01CX_1540 UTP-glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase 2000530 5292943 Cbei_1727 Clostridium beijerinckii NCIMB 8052 UTP-glucose-1-phosphate uridylyltransferase YP_001308855.1 1999640 D 290402 CDS YP_001308856.1 150016602 5292944 2000712..2001164 1 NC_009617.1 KEGG: ava:Ava_5022 hypothetical protein; hypothetical protein 2001164 5292944 Cbei_1728 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308856.1 2000712 D 290402 CDS YP_001308857.1 150016603 5292945 2001325..2002548 1 NC_009617.1 TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; Glycosyltransferase 28, C-terminal domain; KEGG: btk:BT9727_1898 glycosyltransferase; possible macrolide glycosyltransferase; glycosyl transferase family protein 2002548 5292945 Cbei_1729 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001308857.1 2001325 D 290402 CDS YP_001308858.1 150016604 5292946 2002804..2003310 1 NC_009617.1 PFAM: NUDIX hydrolase; KEGG: lmf:LMOf2365_0384 MutT/nudix family protein; NUDIX hydrolase 2003310 5292946 Cbei_1730 Clostridium beijerinckii NCIMB 8052 NUDIX hydrolase YP_001308858.1 2002804 D 290402 CDS YP_001308859.1 150016605 5292947 2003459..2004136 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cno:NT01CX_1513 two-component response regulator; two component transcriptional regulator 2004136 5292947 Cbei_1731 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001308859.1 2003459 D 290402 CDS YP_001308860.1 150016606 5292948 2004139..2005653 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cno:NT01CX_1514 membrane associated histidine kinase with HAMP domain; integral membrane sensor signal transduction histidine kinase 2005653 5292948 Cbei_1732 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001308860.1 2004139 D 290402 CDS YP_001308861.1 150016607 5292949 complement(2005824..2006126) 1 NC_009617.1 KEGG: cpr:CPR_0939 hypothetical protein; hypothetical protein 2006126 5292949 Cbei_1733 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308861.1 2005824 R 290402 CDS YP_001308862.1 150016608 5292950 2006603..2007835 1 NC_009617.1 hypothetical protein 2007835 5292950 Cbei_1734 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308862.1 2006603 D 290402 CDS YP_001308863.1 150016609 5292951 complement(2007939..2009366) 1 NC_009617.1 KEGG: rno:690249 hypothetical protein LOC690249; hypothetical protein 2009366 5292951 Cbei_1735 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308863.1 2007939 R 290402 CDS YP_001308864.1 150016610 5292952 complement(2009359..2009847) 1 NC_009617.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: dsy:DSY1734 hypothetical protein; ECF subfamily RNA polymerase sigma-24 factor 2009847 5292952 Cbei_1736 Clostridium beijerinckii NCIMB 8052 ECF subfamily RNA polymerase sigma-24 factor YP_001308864.1 2009359 R 290402 CDS YP_001308865.1 150016611 5292953 2010211..2010807 1 NC_009617.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: cpf:CPF_0793 flavodoxin family protein; NAD(P)H dehydrogenase (quinone) 2010807 5292953 Cbei_1737 Clostridium beijerinckii NCIMB 8052 NAD(P)H dehydrogenase (quinone) YP_001308865.1 2010211 D 290402 CDS YP_001308866.1 150016612 5292954 2011115..2011270 1 NC_009617.1 KEGG: cpr:CPR_0375 hypothetical protein; hypothetical protein 2011270 5292954 Cbei_1738 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308866.1 2011115 D 290402 CDS YP_001308867.1 150016613 5292955 2011404..2012186 1 NC_009617.1 PFAM: protein of unknown function DUF328; KEGG: cpf:CPF_2407 hypothetical protein; hypothetical protein 2012186 5292955 Cbei_1739 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308867.1 2011404 D 290402 CDS YP_001308868.1 150016614 5292956 2012256..2013182 1 NC_009617.1 member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z 2013182 5292956 Cbei_1740 Clostridium beijerinckii NCIMB 8052 ribonuclease Z YP_001308868.1 2012256 D 290402 CDS YP_001308869.1 150016615 5292957 2013449..2014150 1 NC_009617.1 TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: cac:CAC0965 1-acyl-sn-glycerol-3-phosphate acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 2014150 5292957 Cbei_1741 Clostridium beijerinckii NCIMB 8052 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_001308869.1 2013449 D 290402 CDS YP_001308870.1 150016616 5292958 2014432..2016468 1 NC_009617.1 TIGRFAM: small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor G, domain IV; KEGG: cac:CAC0854 tetracycline resistance protein TetP, contain GTP-ase domain; small GTP-binding protein 2016468 5292958 Cbei_1742 Clostridium beijerinckii NCIMB 8052 small GTP-binding protein YP_001308870.1 2014432 D 290402 CDS YP_001308871.1 150016617 5292959 2016550..2017329 1 NC_009617.1 PFAM: protein of unknown function DUF45; KEGG: cpf:CPF_0800 hypothetical protein; hypothetical protein 2017329 5292959 Cbei_1743 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308871.1 2016550 D 290402 CDS YP_001308872.1 150016618 5292960 complement(2017423..2017884) 1 NC_009617.1 PFAM: protein of unknown function DUF606; KEGG: bce:BC3451 hypothetical membrane spanning protein; hypothetical protein 2017884 5292960 Cbei_1744 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308872.1 2017423 R 290402 CDS YP_001308873.1 150016619 5292961 complement(2017906..2018328) 1 NC_009617.1 PFAM: protein of unknown function DUF606; KEGG: bca:BCE_3463 hypothetical protein; hypothetical protein 2018328 5292961 Cbei_1745 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308873.1 2017906 R 290402 CDS YP_001308874.1 150016620 5292962 2018501..2019193 1 NC_009617.1 PFAM: cyclic nucleotide-binding; KEGG: btk:BT9727_3228 possible transcriptional regulator; cyclic nucleotide-binding domain protein; cyclic nucleotide-binding protein 2019193 5292962 Cbei_1746 Clostridium beijerinckii NCIMB 8052 cyclic nucleotide-binding protein YP_001308874.1 2018501 D 290402 CDS YP_001308875.1 150016621 5292963 complement(2019409..2020518) 1 NC_009617.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cno:NT01CX_2355 ATP-dependent RNA helicase; DEAD/DEAH box helicase 2020518 5292963 Cbei_1747 Clostridium beijerinckii NCIMB 8052 DEAD/DEAH box helicase YP_001308875.1 2019409 R 290402 CDS YP_001308876.1 150016622 5292964 2020842..2021270 1 NC_009617.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: cac:CAC2236 uncharacterized conserved protein of YjeB/RRF2 family; BadM/Rrf2 family transcriptional regulator 2021270 5292964 Cbei_1748 Clostridium beijerinckii NCIMB 8052 BadM/Rrf2 family transcriptional regulator YP_001308876.1 2020842 D 290402 CDS YP_001308877.1 150016623 5292965 2022262..2023653 1 NC_009617.1 TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: tte:TTE1583 anthranilate/para-aminobenzoate synthases component I; anthranilate synthase component I 2023653 5292965 Cbei_1749 Clostridium beijerinckii NCIMB 8052 anthranilate synthase component I YP_001308877.1 2022262 D 290402 CDS YP_001308878.1 150016624 5292966 2023650..2024237 1 NC_009617.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: cac:CAC3162 anthranilate synthase component II; glutamine amidotransferase of anthranilate synthase 2024237 5292966 Cbei_1750 Clostridium beijerinckii NCIMB 8052 glutamine amidotransferase of anthranilate synthase YP_001308878.1 2023650 D 290402 CDS YP_001308879.1 150016625 5292967 2024317..2025336 1 NC_009617.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2025336 trpD 5292967 trpD Clostridium beijerinckii NCIMB 8052 anthranilate phosphoribosyltransferase YP_001308879.1 2024317 D 290402 CDS YP_001308880.1 150016626 5292968 2025361..2026164 1 NC_009617.1 PFAM: Indole-3-glycerol phosphate synthase; KEGG: cac:CAC3160 indole-3-glycerol phosphate synthase; Indole-3-glycerol phosphate synthase 2026164 5292968 Cbei_1752 Clostridium beijerinckii NCIMB 8052 Indole-3-glycerol phosphate synthase YP_001308880.1 2025361 D 290402 CDS YP_001308881.1 150016627 5292969 2026207..2026896 1 NC_009617.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: cth:Cthe_0871 phosphoribosylanthranilate isomerase; phosphoribosylanthranilate isomerase 2026896 5292969 Cbei_1753 Clostridium beijerinckii NCIMB 8052 phosphoribosylanthranilate isomerase YP_001308881.1 2026207 D 290402 CDS YP_001308882.1 150016628 5292970 2026918..2028093 1 NC_009617.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 2028093 5292970 Cbei_1754 Clostridium beijerinckii NCIMB 8052 tryptophan synthase subunit beta YP_001308882.1 2026918 D 290402 CDS YP_001308883.1 150016629 5292971 2028093..2028869 1 NC_009617.1 TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase, alpha chain; KEGG: cac:CAC3157 tryptophan synthase alpha chain; tryptophan synthase subunit alpha 2028869 5292971 Cbei_1755 Clostridium beijerinckii NCIMB 8052 tryptophan synthase subunit alpha YP_001308883.1 2028093 D 290402 CDS YP_001308884.1 150016630 5292972 complement(2028994..2029407) 1 NC_009617.1 PFAM: protein of unknown function DUF1284; KEGG: cno:NT01CX_0018 hypothetical protein; hypothetical protein 2029407 5292972 Cbei_1756 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308884.1 2028994 R 290402 CDS YP_001308885.1 150016631 5292973 2029699..2029998 1 NC_009617.1 KEGG: cpr:CPR_1498 hypothetical protein; hypothetical protein 2029998 5292973 Cbei_1757 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308885.1 2029699 D 290402 CDS YP_001308886.1 150016632 5292974 2030114..2030533 1 NC_009617.1 KEGG: ctc:CTC01852 hypothetical protein; hypothetical protein 2030533 5292974 Cbei_1758 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308886.1 2030114 D 290402 CDS YP_001308887.1 150016633 5296353 2036870..2037568 1 NC_009617.1 TIGRFAM: phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase; KEGG: bat:BAS2313 phosphoglycerate mutase; phosphoglycerate mutase 2037568 5296353 Cbei_1759 Clostridium beijerinckii NCIMB 8052 phosphoglycerate mutase YP_001308887.1 2036870 D 290402 CDS YP_001308888.1 150016634 5292976 2037882..2039282 1 NC_009617.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: lsa:LSA0328 drug:Na(+) antiporter (drug efflux pump); MATE efflux family protein 2039282 5292976 Cbei_1760 Clostridium beijerinckii NCIMB 8052 MATE efflux family protein YP_001308888.1 2037882 D 290402 CDS YP_001308889.1 150016635 5292977 2039880..2040620 1 NC_009617.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mst:Msp_1323 hypothetical protein; hypothetical protein 2040620 5292977 Cbei_1761 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308889.1 2039880 D 290402 CDS YP_001308890.1 150016636 5292978 2041208..2042374 1 NC_009617.1 PFAM: Extracellular ligand-binding receptor; KEGG: lip:LI0496 branched chain amino acid ABC transporter periplasmic amino acid-binding protein; extracellular ligand-binding receptor 2042374 5292978 Cbei_1762 Clostridium beijerinckii NCIMB 8052 extracellular ligand-binding receptor YP_001308890.1 2041208 D 290402 CDS YP_001308891.1 150016637 5292979 2042389..2043291 1 NC_009617.1 PFAM: inner-membrane translocator; KEGG: sfu:Sfum_0861 inner-membrane translocator; inner-membrane translocator 2043291 5292979 Cbei_1763 Clostridium beijerinckii NCIMB 8052 inner-membrane translocator YP_001308891.1 2042389 D 290402 CDS YP_001308892.1 150016638 5292980 2043294..2044352 1 NC_009617.1 PFAM: inner-membrane translocator; KEGG: bqu:BQ06310 high-affinity branched-chain amino acid transporter permease; inner-membrane translocator 2044352 5292980 Cbei_1764 Clostridium beijerinckii NCIMB 8052 inner-membrane translocator YP_001308892.1 2043294 D 290402 CDS YP_001308893.1 150016639 5292981 2044352..2045122 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: tma:TM1138 branched-chain amino acid transport system ATP-binding protein; ABC transporter 2045122 5292981 Cbei_1765 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001308893.1 2044352 D 290402 CDS YP_001308894.1 150016640 5292982 2045115..2045828 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: tma:TM1139 branched-chain amino acid transport system ATP-binding protein; ABC transporter 2045828 5292982 Cbei_1766 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001308894.1 2045115 D 290402 CDS YP_001308895.1 150016641 5292983 2046110..2047273 1 NC_009617.1 PFAM: Extracellular ligand-binding receptor; KEGG: lip:LI0496 branched chain amino acid ABC transporter periplasmic amino acid-binding protein; extracellular ligand-binding receptor 2047273 5292983 Cbei_1767 Clostridium beijerinckii NCIMB 8052 extracellular ligand-binding receptor YP_001308895.1 2046110 D 290402 CDS YP_001308896.1 150016642 5292984 2047436..2047828 1 NC_009617.1 KEGG: cpe:CPE0415 hypothetical protein; hypothetical protein 2047828 5292984 Cbei_1768 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308896.1 2047436 D 290402 CDS YP_001308897.1 150016643 5292985 2048180..2049718 1 NC_009617.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dge:Dgeo_1614 diguanylate cyclase with PAS/PAC sensor; diguanylate cyclase 2049718 5292985 Cbei_1769 Clostridium beijerinckii NCIMB 8052 diguanylate cyclase YP_001308897.1 2048180 D 290402 CDS YP_001308898.1 150016644 5292986 complement(2049919..2051148) 1 NC_009617.1 PFAM: protein of unknown function DUF894, DitE; major facilitator superfamily MFS_1; KEGG: cac:CA_P0049 permease, MDR related; major facilitator superfamily transporter 2051148 5292986 Cbei_1770 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001308898.1 2049919 R 290402 CDS YP_001308899.1 150016645 5292987 2051636..2052295 1 NC_009617.1 PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: cpr:CPR_0434 sulfite/nitrite reductase; nitrite and sulfite reductase 4Fe-4S subunit 2052295 5292987 Cbei_1771 Clostridium beijerinckii NCIMB 8052 nitrite and sulfite reductase 4Fe-4S subunit YP_001308899.1 2051636 D 290402 CDS YP_001308900.1 150016646 5292988 2052396..2053061 1 NC_009617.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cth:Cthe_0780 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase 2053061 5292988 Cbei_1772 Clostridium beijerinckii NCIMB 8052 HAD family hydrolase YP_001308900.1 2052396 D 290402 CDS YP_001308901.1 150016647 5292989 2053565..2055499 1 NC_009617.1 TIGRFAM: hydrogenase, Fe-only; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; iron hydrogenase, small subunit; hydrogenase large subunit domain protein; KEGG: pca:Pcar_1605 NADH:ubiquinone oxidoreductase subunit; hydrogenase, Fe-only 2055499 5292989 Cbei_1773 Clostridium beijerinckii NCIMB 8052 hydrogenase, Fe-only YP_001308901.1 2053565 D 290402 CDS YP_001308902.1 150016648 5292990 2056236..2056859 1 NC_009617.1 PFAM: protein of unknown function DUF47; KEGG: cpf:CPF_0562 hypothetical protein; hypothetical protein 2056859 5292990 Cbei_1774 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308902.1 2056236 D 290402 CDS YP_001308903.1 150016649 5292991 2056852..2057850 1 NC_009617.1 PFAM: phosphate transporter; KEGG: cpr:CPR_0549 phosphate permease; phosphate transporter 2057850 5292991 Cbei_1775 Clostridium beijerinckii NCIMB 8052 phosphate transporter YP_001308903.1 2056852 D 290402 CDS YP_001308904.1 150016650 5292992 2058025..2059221 1 NC_009617.1 hypothetical protein 2059221 5292992 Cbei_1776 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308904.1 2058025 D 290402 CDS YP_001308905.1 150016651 5292993 2059261..2060109 1 NC_009617.1 PFAM: metallophosphoesterase; KEGG: cth:Cthe_1896 metallophosphoesterase; metallophosphoesterase 2060109 5292993 Cbei_1777 Clostridium beijerinckii NCIMB 8052 metallophosphoesterase YP_001308905.1 2059261 D 290402 CDS YP_001308906.1 150016652 5296354 2060430..2060807 1 NC_009617.1 KEGG: cno:NT01CX_2050 hypothetical protein; hypothetical protein 2060807 5296354 Cbei_1779 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308906.1 2060430 D 290402 CDS YP_001308907.1 150016653 5292995 2060944..2061324 1 NC_009617.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cac:CAC0249 glyoxalase I (glyoxalase family); glyoxalase/bleomycin resistance protein/dioxygenase 2061324 5292995 Cbei_1780 Clostridium beijerinckii NCIMB 8052 glyoxalase/bleomycin resistance protein/dioxygenase YP_001308907.1 2060944 D 290402 CDS YP_001308908.1 150016654 5292996 2061365..2062555 1 NC_009617.1 PFAM: aminotransferase, class I and II; KEGG: tde:TDE1669 hemolysin; class I and II aminotransferase 2062555 5292996 Cbei_1781 Clostridium beijerinckii NCIMB 8052 class I and II aminotransferase YP_001308908.1 2061365 D 290402 CDS YP_001308909.1 150016655 5292997 2063559..2066204 1 NC_009617.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 2066204 valS 5292997 valS Clostridium beijerinckii NCIMB 8052 valyl-tRNA synthetase YP_001308909.1 2063559 D 290402 CDS YP_001308910.1 150016656 5292998 2066478..2067329 1 NC_009617.1 PFAM: Integral membrane protein TerC; KEGG: chu:CHU_1367 probable integral membrane protein, TerC family; integral membrane protein TerC 2067329 5292998 Cbei_1783 Clostridium beijerinckii NCIMB 8052 integral membrane protein TerC YP_001308910.1 2066478 D 290402 CDS YP_001308911.1 150016657 5292999 2067546..2068859 1 NC_009617.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; KEGG: cno:NT01CX_1729 folylpolyglutamate synthase; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 2068859 5292999 Cbei_1784 Clostridium beijerinckii NCIMB 8052 bifunctional folylpolyglutamate synthase/dihydrofolate synthase YP_001308911.1 2067546 D 290402 CDS YP_001308912.1 150016658 5293000 2068962..2070941 1 NC_009617.1 PFAM: HIRAN; KEGG: ctc:CTC01149 hypothetical protein; hypothetical protein 2070941 5293000 Cbei_1785 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308912.1 2068962 D 290402 CDS YP_001308913.1 150016659 5293001 complement(2071065..2071322) 1 NC_009617.1 KEGG: cpf:CPF_1268 hypothetical protein; hypothetical protein 2071322 5293001 Cbei_1786 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308913.1 2071065 R 290402 CDS YP_001308914.1 150016660 5293002 2071465..2072427 1 NC_009617.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: ctc:CTC02300 hypothetical protein; hypothetical protein 2072427 5293002 Cbei_1787 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308914.1 2071465 D 290402 CDS YP_001308915.1 150016661 5293003 complement(2072671..2073195) 1 NC_009617.1 KEGG: cpr:CPR_1879 hypothetical protein; hypothetical protein 2073195 5293003 Cbei_1788 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308915.1 2072671 R 290402 CDS YP_001308916.1 150016662 5293004 2073363..2074124 1 NC_009617.1 PFAM: polysaccharide deacetylase; KEGG: cpr:CPR_1878 polysaccharide deacetylase family protein; polysaccharide deacetylase 2074124 5293004 Cbei_1789 Clostridium beijerinckii NCIMB 8052 polysaccharide deacetylase YP_001308916.1 2073363 D 290402 CDS YP_001308917.1 150016663 5293005 2074230..2074880 1 NC_009617.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 2074880 5293005 Cbei_1790 Clostridium beijerinckii NCIMB 8052 single-stranded DNA-binding protein YP_001308917.1 2074230 D 290402 CDS YP_001308918.1 150016664 5293006 complement(2075107..2075817) 1 NC_009617.1 PFAM: transferase hexapeptide repeat containing protein; Tetrahydrodipicolinate succinyltransferase N-terminal domain protein; KEGG: cpf:CPF_2165 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; tetrahydrodipicolinate succinyltransferase domain-containing protein 2075817 5293006 Cbei_1791 Clostridium beijerinckii NCIMB 8052 tetrahydrodipicolinate succinyltransferase domain-containing protein YP_001308918.1 2075107 R 290402 CDS YP_001308919.1 150016665 5293007 2075973..2077118 1 NC_009617.1 PFAM: aminotransferase, class I and II; KEGG: cpr:CPR_1874 aspartate aminotransferase; class I and II aminotransferase 2077118 5293007 Cbei_1792 Clostridium beijerinckii NCIMB 8052 class I and II aminotransferase YP_001308919.1 2075973 D 290402 CDS YP_001308920.1 150016666 5293008 2077203..2077520 1 NC_009617.1 PFAM: protein of unknown function DUF1255; KEGG: pca:Pcar_1338 hypothetical protein; hypothetical protein 2077520 5293008 Cbei_1793 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308920.1 2077203 D 290402 CDS YP_001308921.1 150016667 5293009 2077828..2078136 1 NC_009617.1 PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; KEGG: ssa:SSA_1771 conserved DNA methyltransferase protein; DNA binding methylated-DNA-(protein)-cysteine S-methyltransferase 2078136 5293009 Cbei_1794 Clostridium beijerinckii NCIMB 8052 DNA binding methylated-DNA-(protein)-cysteine S-methyltransferase YP_001308921.1 2077828 D 290402 CDS YP_001308922.1 150016668 5293010 complement(2078371..2079126) 1 NC_009617.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 2079126 5293010 Cbei_1795 Clostridium beijerinckii NCIMB 8052 dihydrodipicolinate reductase YP_001308922.1 2078371 R 290402 CDS YP_001308923.1 150016669 5293011 complement(2079136..2080014) 1 NC_009617.1 TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: cno:NT01CX_1746 dihydrodipicolinate synthase; dihydrodipicolinate synthase 2080014 5293011 Cbei_1796 Clostridium beijerinckii NCIMB 8052 dihydrodipicolinate synthase YP_001308923.1 2079136 R 290402 CDS YP_001308924.1 150016670 5293012 complement(2080044..2081036) 1 NC_009617.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, NAD - binding; Semialdehyde dehydrogenase, dimerisation region; KEGG: cpf:CPF_2160 aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase 2081036 5293012 Cbei_1797 Clostridium beijerinckii NCIMB 8052 aspartate-semialdehyde dehydrogenase YP_001308924.1 2080044 R 290402 CDS YP_001308925.1 150016671 5293013 2081479..2081697 1 NC_009617.1 KEGG: cno:NT01CX_1748 small acid-soluble spore protein; small acid-soluble spore protein 2081697 5293013 Cbei_1798 Clostridium beijerinckii NCIMB 8052 small acid-soluble spore protein YP_001308925.1 2081479 D 290402 CDS YP_001308926.1 150016672 5293014 2081799..2082536 1 NC_009617.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cpf:CPF_2158 hypothetical protein; type 11 methyltransferase 2082536 5293014 Cbei_1799 Clostridium beijerinckii NCIMB 8052 type 11 methyltransferase YP_001308926.1 2081799 D 290402 CDS YP_001308927.1 150016673 5293015 2082563..2083444 1 NC_009617.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 2083444 hslO 5293015 hslO Clostridium beijerinckii NCIMB 8052 Hsp33-like chaperonin YP_001308927.1 2082563 D 290402 CDS YP_001308928.1 150016674 5293016 2083585..2084340 1 NC_009617.1 PFAM: protein of unknown function DUF218; KEGG: cpe:CPE1241 hypothetical protein; hypothetical protein 2084340 5293016 Cbei_1801 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308928.1 2083585 D 290402 CDS YP_001308929.1 150016675 5293017 2084389..2085234 1 NC_009617.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cpr:CPR_0987 ribosomal large subunit pseudouridine synthase F; pseudouridine synthase 2085234 5293017 Cbei_1802 Clostridium beijerinckii NCIMB 8052 pseudouridine synthase YP_001308929.1 2084389 D 290402 CDS YP_001308930.1 150016676 5293018 2085452..2085781 1 NC_009617.1 hypothetical protein 2085781 5293018 Cbei_1803 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308930.1 2085452 D 290402 CDS YP_001308931.1 150016677 5293019 2085778..2087223 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: ctc:CTC01491 sensory transduction protein kinase; integral membrane sensor signal transduction histidine kinase 2087223 5293019 Cbei_1804 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001308931.1 2085778 D 290402 CDS YP_001308932.1 150016678 5293020 2087265..2087963 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: chy:CHY_0092 DNA-binding response regulator; two component transcriptional regulator 2087963 5293020 Cbei_1805 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001308932.1 2087265 D 290402 CDS YP_001308933.1 150016679 5293021 2088284..2089528 1 NC_009617.1 KEGG: pfa:PF14_0337 hypothetical protein; hypothetical protein 2089528 5293021 Cbei_1806 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308933.1 2088284 D 290402 CDS YP_001308934.1 150016680 5293022 2089531..2091006 1 NC_009617.1 PFAM: secretion protein HlyD family protein; KEGG: dsy:DSY3620 hypothetical protein; secretion protein HlyD family protein 2091006 5293022 Cbei_1807 Clostridium beijerinckii NCIMB 8052 secretion protein HlyD family protein YP_001308934.1 2089531 D 290402 CDS YP_001308935.1 150016681 5293023 2091014..2091757 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY3619 hypothetical protein; ABC transporter 2091757 5293023 Cbei_1808 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001308935.1 2091014 D 290402 CDS YP_001308936.1 150016682 5293024 2091802..2093241 1 NC_009617.1 PFAM: protein of unknown function DUF214; KEGG: dsy:DSY3618 hypothetical protein; hypothetical protein 2093241 5293024 Cbei_1809 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308936.1 2091802 D 290402 CDS YP_001308937.1 150016683 5293025 complement(2093335..2093958) 1 NC_009617.1 KEGG: cno:NT01CX_1194 hypothetical protein; hypothetical protein 2093958 5293025 Cbei_1810 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308937.1 2093335 R 290402 CDS YP_001308938.1 150016684 5293026 complement(2094344..2094970) 1 NC_009617.1 PFAM: SNARE associated Golgi protein; KEGG: cpe:CPE1612 hypothetical protein; hypothetical protein 2094970 5293026 Cbei_1811 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308938.1 2094344 R 290402 CDS YP_001308939.1 150016685 5293027 2095200..2096276 1 NC_009617.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 2096276 5293027 Cbei_1812 Clostridium beijerinckii NCIMB 8052 histidinol-phosphate aminotransferase YP_001308939.1 2095200 D 290402 CDS YP_001308940.1 150016686 5293028 2096494..2097531 1 NC_009617.1 PFAM: peptidase M42 family protein; KEGG: cpf:CPF_1252 aminopeptidase, M42 family; peptidase M42 family protein 2097531 5293028 Cbei_1813 Clostridium beijerinckii NCIMB 8052 peptidase M42 family protein YP_001308940.1 2096494 D 290402 CDS YP_001308941.1 150016687 5293029 2097919..2098575 1 NC_009617.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cac:CAC0632 predicted phosphatase; HAD family hydrolase 2098575 5293029 Cbei_1814 Clostridium beijerinckii NCIMB 8052 HAD family hydrolase YP_001308941.1 2097919 D 290402 CDS YP_001308942.1 150016688 5293030 2098707..2100182 1 NC_009617.1 PFAM: leucine-rich repeat protein; cell wall binding repeat-containing protein; SMART: leucine-rich repeat-containing protein, typical subtype; KEGG: cpf:CPF_0611 cell wall binding repeat protein; cell wall binding repeat-containing protein 2100182 5293030 Cbei_1815 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001308942.1 2098707 D 290402 CDS YP_001308943.1 150016689 5293031 2100486..2101448 1 NC_009617.1 PFAM: cobalamin synthesis protein, P47K; KEGG: ctc:CTC00941 cobalamin synthesis protein CobW; cobalamin synthesis protein, P47K 2101448 5293031 Cbei_1816 Clostridium beijerinckii NCIMB 8052 cobalamin synthesis protein, P47K YP_001308943.1 2100486 D 290402 CDS YP_001308944.1 150016690 5293032 2101491..2102159 1 NC_009617.1 KEGG: ctc:CTC00940 hypothetical protein; hypothetical protein 2102159 5293032 Cbei_1817 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308944.1 2101491 D 290402 CDS YP_001308945.1 150016691 5293033 2102156..2103154 1 NC_009617.1 PFAM: permease; KEGG: cno:NT01CX_2389 predicted permease superfamily; permease 2103154 5293033 Cbei_1818 Clostridium beijerinckii NCIMB 8052 permease YP_001308945.1 2102156 D 290402 CDS YP_001308946.1 150016692 5293034 2103321..2103950 1 NC_009617.1 KEGG: ctc:CTC00938 membrane-spanning protein; membrane-spanning protein 2103950 5293034 Cbei_1819 Clostridium beijerinckii NCIMB 8052 membrane-spanning protein YP_001308946.1 2103321 D 290402 CDS YP_001308947.1 150016693 5293035 complement(2104087..2104665) 1 NC_009617.1 hypothetical protein 2104665 5293035 Cbei_1820 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308947.1 2104087 R 290402 CDS YP_001308948.1 150016694 5293036 complement(2105130..2106338) 1 NC_009617.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: ctc:CTC01856 ATP-dependent RNA helicase; DEAD/DEAH box helicase 2106338 5293036 Cbei_1821 Clostridium beijerinckii NCIMB 8052 DEAD/DEAH box helicase YP_001308948.1 2105130 R 290402 CDS YP_001308949.1 150016695 5293037 2106655..2108097 1 NC_009617.1 PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: baa:BA_0561 DEAD/DEAH box helicase; DEAD/DEAH box helicase 2108097 5293037 Cbei_1822 Clostridium beijerinckii NCIMB 8052 DEAD/DEAH box helicase YP_001308949.1 2106655 D 290402 CDS YP_001308950.1 150016696 5293038 2108410..2109279 1 NC_009617.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; SEC-C motif domain protein; KEGG: cpf:CPF_1635 methionine aminopeptidase, type I; methionine aminopeptidase 2109279 5293038 Cbei_1823 Clostridium beijerinckii NCIMB 8052 methionine aminopeptidase YP_001308950.1 2108410 D 290402 CDS YP_001308951.1 150016697 5293039 2109363..2111813 1 NC_009617.1 TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cno:NT01CX_2302 ATP-dependent DNA helicase; ATP-dependent DNA helicase RecQ 2111813 5293039 Cbei_1824 Clostridium beijerinckii NCIMB 8052 ATP-dependent DNA helicase RecQ YP_001308951.1 2109363 D 290402 CDS YP_001308952.1 150016698 5293040 2111935..2112438 1 NC_009617.1 PFAM: heat shock protein DnaJ domain protein; Tetratricopeptide TPR_2 repeat protein; KEGG: cno:NT01CX_1376 molecular chaperone, DnaJ family (contain C-term. Zn finger domain); heat shock protein DnaJ domain-containing protein 2112438 5293040 Cbei_1825 Clostridium beijerinckii NCIMB 8052 heat shock protein DnaJ domain-containing protein YP_001308952.1 2111935 D 290402 CDS YP_001308953.1 150016699 5293041 2113025..2113690 1 NC_009617.1 Heat shock-induced; RNA polymerase sigma factor SigI 2113690 5293041 Cbei_1826 Clostridium beijerinckii NCIMB 8052 RNA polymerase sigma factor SigI YP_001308953.1 2113025 D 290402 CDS YP_001308954.1 150016700 5293042 2113700..2114836 1 NC_009617.1 KEGG: bsu:BG13272 hypothetical protein; hypothetical protein 2114836 5293042 Cbei_1827 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308954.1 2113700 D 290402 CDS YP_001308955.1 150016701 5293043 2115027..2116808 1 NC_009617.1 catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase 2116808 5293043 Cbei_1828 Clostridium beijerinckii NCIMB 8052 bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase YP_001308955.1 2115027 D 290402 CDS YP_001308956.1 150016702 5293044 2116854..2117399 1 NC_009617.1 PFAM: Phosphoglycerate mutase; KEGG: bha:BH0736 hypothetical protein; phosphoglycerate mutase 2117399 5293044 Cbei_1829 Clostridium beijerinckii NCIMB 8052 phosphoglycerate mutase YP_001308956.1 2116854 D 290402 CDS YP_001308957.1 150016703 5293045 2117590..2118831 1 NC_009617.1 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase 2118831 5293045 Cbei_1830 Clostridium beijerinckii NCIMB 8052 oxidoreductase YP_001308957.1 2117590 D 290402 CDS YP_001308958.1 150016704 5293046 2118954..2120006 1 NC_009617.1 PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: cac:CAC0693 transcriptional regulator of the LacI family; alanine racemase 2120006 5293046 Cbei_1831 Clostridium beijerinckii NCIMB 8052 alanine racemase YP_001308958.1 2118954 D 290402 CDS YP_001308959.1 150016705 5293047 2120202..2121602 1 NC_009617.1 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 2121602 5293047 Cbei_1832 Clostridium beijerinckii NCIMB 8052 glucuronate isomerase YP_001308959.1 2120202 D 290402 CDS YP_001308960.1 150016706 5293048 2121691..2123139 1 NC_009617.1 catalyzes the formation of D-tagaturonate from D-altronate; altronate oxidoreductase 2123139 5293048 Cbei_1833 Clostridium beijerinckii NCIMB 8052 altronate oxidoreductase YP_001308960.1 2121691 D 290402 CDS YP_001308961.1 150016707 5293049 2123225..2123647 1 NC_009617.1 PFAM: histidine triad (HIT) protein; KEGG: bth:BT_4586 hypothetical protein; histidine triad (HIT) protein 2123647 5293049 Cbei_1834 Clostridium beijerinckii NCIMB 8052 histidine triad (HIT) protein YP_001308961.1 2123225 D 290402 CDS YP_001308962.1 150016708 5293050 2123700..2125106 1 NC_009617.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: lbr:LVIS_0148 Na+/xyloside symporter related transporter; sugar (glycoside-Pentoside-hexuronide) transporter 2125106 5293050 Cbei_1835 Clostridium beijerinckii NCIMB 8052 sugar (glycoside-Pentoside-hexuronide) transporter YP_001308962.1 2123700 D 290402 CDS YP_001308963.1 150016709 5293051 2125775..2126422 1 NC_009617.1 catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 2126422 5293051 Cbei_1836 Clostridium beijerinckii NCIMB 8052 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase YP_001308963.1 2125775 D 290402 CDS YP_001308964.1 150016710 5293052 2126424..2127374 1 NC_009617.1 PFAM: PfkB domain protein; KEGG: gka:GK1957 2-keto-3-deoxy-gluconate kinase; ribokinase-like domain-containing protein 2127374 5293052 Cbei_1837 Clostridium beijerinckii NCIMB 8052 ribokinase-like domain-containing protein YP_001308964.1 2126424 D 290402 CDS YP_001308965.1 150016711 5293053 2127707..2129155 1 NC_009617.1 catalyzes the formation of D-tagaturonate from D-altronate; altronate oxidoreductase 2129155 5293053 Cbei_1838 Clostridium beijerinckii NCIMB 8052 altronate oxidoreductase YP_001308965.1 2127707 D 290402 CDS YP_001308966.1 150016712 5293054 2129248..2130735 1 NC_009617.1 PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain; KEGG: cac:CAC0696 altronate dehydratase; altronate dehydratase 2130735 5293054 Cbei_1839 Clostridium beijerinckii NCIMB 8052 altronate dehydratase YP_001308966.1 2129248 D 290402 CDS YP_001308967.1 150016713 5293055 2131237..2131728 1 NC_009617.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; PFAM: PTS system sorbose subfamily IIB component; KEGG: yps:YPTB1634 PTS system, mannose-specific IIAB component; PTS system mannose/fructose/sorbose family transporter subunit IIB 2131728 5293055 Cbei_1840 Clostridium beijerinckii NCIMB 8052 PTS system mannose/fructose/sorbose family transporter subunit IIB YP_001308967.1 2131237 D 290402 CDS YP_001308968.1 150016714 5293056 2131981..2132838 1 NC_009617.1 PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: ctc:CTC00497 pyridoxal kinase; phosphomethylpyrimidine kinase type-1 2132838 5293056 Cbei_1841 Clostridium beijerinckii NCIMB 8052 phosphomethylpyrimidine kinase type-1 YP_001308968.1 2131981 D 290402 CDS YP_001308969.1 150016715 5293057 2132967..2133719 1 NC_009617.1 PFAM: regulatory protein, DeoR; KEGG: cpf:CPF_0566 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 2133719 5293057 Cbei_1842 Clostridium beijerinckii NCIMB 8052 DeoR family transcriptional regulator YP_001308969.1 2132967 D 290402 CDS YP_001308970.1 150016716 5293058 2133712..2134614 1 NC_009617.1 PFAM: PfkB domain protein; KEGG: cno:NT01CX_1725 1-phosphofructokinase; 1-phosphofructokinase 2134614 5293058 Cbei_1843 Clostridium beijerinckii NCIMB 8052 1-phosphofructokinase YP_001308970.1 2133712 D 290402 CDS YP_001308971.1 150016717 5293059 2134739..2136661 1 NC_009617.1 TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system, EIIC; phosphotransferase system PTS, fructose-specific IIB subunit; KEGG: btk:BT9727_3462 PTS fructose-specific enzyme IIBC component; PTS system fructose subfamily transporter subunit IIC 2136661 5293059 Cbei_1844 Clostridium beijerinckii NCIMB 8052 PTS system fructose subfamily transporter subunit IIC YP_001308971.1 2134739 D 290402 CDS YP_001308972.1 150016718 5293060 2137002..2137640 1 NC_009617.1 KEGG: cpf:CPF_1730 hypothetical protein; hypothetical protein 2137640 5293060 Cbei_1845 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308972.1 2137002 D 290402 CDS YP_001308973.1 150016719 5293061 2137774..2138325 1 NC_009617.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: cac:CAC0760 uncharacterized conserved protein, YTFE family, possibly metal-binding; hemerythrin HHE cation binding domain-containing protein 2138325 5293061 Cbei_1846 Clostridium beijerinckii NCIMB 8052 hemerythrin HHE cation binding domain-containing protein YP_001308973.1 2137774 D 290402 CDS YP_001308974.1 150016720 5293062 complement(2138565..2138957) 1 NC_009617.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: maq:Maqu_3071 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 2138957 5293062 Cbei_1847 Clostridium beijerinckii NCIMB 8052 BadM/Rrf2 family transcriptional regulator YP_001308974.1 2138565 R 290402 CDS YP_001308975.1 150016721 5293063 2139203..2139955 1 NC_009617.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC3288 iron-regulated ABC transporter ATPase subunit (SufC), VEG296 B.subtilis ortholog; FeS assembly ATPase SufC 2139955 5293063 Cbei_1848 Clostridium beijerinckii NCIMB 8052 FeS assembly ATPase SufC YP_001308975.1 2139203 D 290402 CDS YP_001308976.1 150016722 5293064 2139971..2141380 1 NC_009617.1 TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: cac:CAC3289 iron-regulated ABC-type transporter membrane component (SufB); FeS assembly protein SufB 2141380 5293064 Cbei_1849 Clostridium beijerinckii NCIMB 8052 FeS assembly protein SufB YP_001308976.1 2139971 D 290402 CDS YP_001308977.1 150016723 5293065 2141390..2142487 1 NC_009617.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: cac:CAC3290 iron-regulated ABC-type transporter membrane component (SufB); FeS assembly protein SufD 2142487 5293065 Cbei_1850 Clostridium beijerinckii NCIMB 8052 FeS assembly protein SufD YP_001308977.1 2141390 D 290402 CDS YP_001308978.1 150016724 5293066 2142480..2143709 1 NC_009617.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cac:CAC3291 selenocysteine lyase, NifS family; SufS subfamily cysteine desulfurase 2143709 5293066 Cbei_1851 Clostridium beijerinckii NCIMB 8052 SufS subfamily cysteine desulfurase YP_001308978.1 2142480 D 290402 CDS YP_001308979.1 150016725 5293067 2143715..2144140 1 NC_009617.1 TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: cac:CAC3292 NifU homolog involved in Fe-S cluster formation; NifU family SUF system FeS assembly protein 2144140 5293067 Cbei_1852 Clostridium beijerinckii NCIMB 8052 NifU family SUF system FeS assembly protein YP_001308979.1 2143715 D 290402 CDS YP_001308980.1 150016726 5293068 2144537..2148052 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cpf:CPF_2318 pyruvate-flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 2148052 5293068 Cbei_1853 Clostridium beijerinckii NCIMB 8052 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_001308980.1 2144537 D 290402 CDS YP_001308981.1 150016727 5293069 2148319..2150055 1 NC_009617.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: cpr:CPR_2070 subtilase family protein; peptidase S8/S53 subtilisin kexin sedolisin 2150055 5293069 Cbei_1854 Clostridium beijerinckii NCIMB 8052 peptidase S8/S53 subtilisin kexin sedolisin YP_001308981.1 2148319 D 290402 CDS YP_001308982.1 150016728 5293070 2150275..2152281 1 NC_009617.1 PFAM: protein of unknown function DUF342; KEGG: cac:CAC2225 hypothetical protein; hypothetical protein 2152281 5293070 Cbei_1855 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308982.1 2150275 D 290402 CDS YP_001308983.1 150016729 5293071 2152415..2153035 1 NC_009617.1 PFAM: manganese and iron superoxide dismutase; KEGG: cpr:CPR_1251 Mn/Fe superoxide dismutase; superoxide dismutase 2153035 5293071 Cbei_1856 Clostridium beijerinckii NCIMB 8052 superoxide dismutase YP_001308983.1 2152415 D 290402 CDS YP_001308984.1 150016730 5293072 2153204..2153848 1 NC_009617.1 PFAM: pentapeptide repeat protein; KEGG: cpe:CPE0960 hypothetical protein; pentapeptide repeat-containing protein 2153848 5293072 Cbei_1857 Clostridium beijerinckii NCIMB 8052 pentapeptide repeat-containing protein YP_001308984.1 2153204 D 290402 CDS YP_001308985.1 150016731 5293073 2154020..2154871 1 NC_009617.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: cac:CAC1624 uncharacterized protein from DegV (B.subtilis) family; degV family protein 2154871 5293073 Cbei_1858 Clostridium beijerinckii NCIMB 8052 degV family protein YP_001308985.1 2154020 D 290402 CDS YP_001308986.1 150016732 5293074 2155016..2155882 1 NC_009617.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: cac:CAC1576 predicted oxidoreductase, ortholog of GSP39 B.subtilis; short-chain dehydrogenase/reductase SDR 2155882 5293074 Cbei_1859 Clostridium beijerinckii NCIMB 8052 short-chain dehydrogenase/reductase SDR YP_001308986.1 2155016 D 290402 CDS YP_001308987.1 150016733 5293075 2156359..2156682 1 NC_009617.1 PFAM: ArsR family transcriptional regulator; KEGG: cpr:CPR_0825 transcription regulator; ArsR family transcriptional regulator 2156682 5293075 Cbei_1860 Clostridium beijerinckii NCIMB 8052 ArsR family transcriptional regulator YP_001308987.1 2156359 D 290402 CDS YP_001308988.1 150016734 5293076 2156734..2158092 1 NC_009617.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cpr:CPR_0828 MATE efflux family protein; MATE efflux family protein 2158092 5293076 Cbei_1861 Clostridium beijerinckii NCIMB 8052 MATE efflux family protein YP_001308988.1 2156734 D 290402 CDS YP_001308989.1 150016735 5293077 2158138..2160486 1 NC_009617.1 Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; bifunctional glutamate--cysteine ligase/glutathione synthetase 2160486 5293077 Cbei_1862 Clostridium beijerinckii NCIMB 8052 bifunctional glutamate--cysteine ligase/glutathione synthetase YP_001308989.1 2158138 D 290402 CDS YP_001308990.1 150016736 5293078 complement(2160551..2161114) 1 NC_009617.1 hypothetical protein 2161114 5293078 Cbei_1863 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308990.1 2160551 R 290402 CDS YP_001308991.1 150016737 5293079 2161340..2161999 1 NC_009617.1 KEGG: cac:CAC1097 hypothetical protein; hypothetical protein 2161999 5293079 Cbei_1864 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308991.1 2161340 D 290402 CDS YP_001308992.1 150016738 5293080 2162089..2162646 1 NC_009617.1 hypothetical protein 2162646 5293080 Cbei_1865 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308992.1 2162089 D 290402 CDS YP_001308993.1 150016739 5293081 complement(2162657..2163106) 1 NC_009617.1 KEGG: cpr:CPR_1897 hypothetical protein; hypothetical protein 2163106 5293081 Cbei_1866 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308993.1 2162657 R 290402 CDS YP_001308994.1 150016740 5293082 complement(2163172..2163930) 1 NC_009617.1 PFAM: protein of unknown function DUF1212; KEGG: cac:CAC2265 hypothetical protein; hypothetical protein 2163930 5293082 Cbei_1867 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308994.1 2163172 R 290402 CDS YP_001308995.1 150016741 5293083 2164278..2165513 1 NC_009617.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 2165513 glyA 5293083 glyA Clostridium beijerinckii NCIMB 8052 serine hydroxymethyltransferase YP_001308995.1 2164278 D 290402 CDS YP_001308996.1 150016742 5293084 2165734..2166249 1 NC_009617.1 PFAM: isochorismatase hydrolase; KEGG: smu:SMU.326 hypothetical protein; isochorismatase hydrolase 2166249 5293084 Cbei_1869 Clostridium beijerinckii NCIMB 8052 isochorismatase hydrolase YP_001308996.1 2165734 D 290402 CDS YP_001308997.1 150016743 5293085 2166376..2166624 1 NC_009617.1 hypothetical protein 2166624 5293085 Cbei_1870 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308997.1 2166376 D 290402 CDS YP_001308998.1 150016744 5293086 complement(2166784..2166939) 1 NC_009617.1 KEGG: cpf:CPF_1206 hypothetical protein; hypothetical protein 2166939 5293086 Cbei_1871 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308998.1 2166784 R 290402 CDS YP_001308999.1 150016745 5293087 complement(2167066..2167557) 1 NC_009617.1 hypothetical protein 2167557 5293087 Cbei_1872 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001308999.1 2167066 R 290402 CDS YP_001309000.1 150016746 5293088 2168120..2170309 1 NC_009617.1 decatenates replicating daughter chromosomes; DNA topoisomerase III 2170309 5293088 Cbei_1873 Clostridium beijerinckii NCIMB 8052 DNA topoisomerase III YP_001309000.1 2168120 D 290402 CDS YP_001309001.1 150016747 5293089 2170486..2171676 1 NC_009617.1 PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: cpf:CPF_2061 D-alanyl-D-alanine carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 2171676 5293089 Cbei_1874 Clostridium beijerinckii NCIMB 8052 serine-type D-Ala-D-Ala carboxypeptidase YP_001309001.1 2170486 D 290402 CDS YP_001309002.1 150016748 5293090 2172071..2172838 1 NC_009617.1 functions during chromosome segregation; may form a condensin-like structure with SMC and ScpB; segregation and condensation protein A 2172838 scpA 5293090 scpA Clostridium beijerinckii NCIMB 8052 segregation and condensation protein A YP_001309002.1 2172071 D 290402 CDS YP_001309003.1 150016749 5293091 2172828..2173421 1 NC_009617.1 functions during chromosome segregation; may form a condensin-like structure with SMC and ScpA; forms a homodimer; segregation and condensation protein B 2173421 scpB 5293091 scpB Clostridium beijerinckii NCIMB 8052 segregation and condensation protein B YP_001309003.1 2172828 D 290402 CDS YP_001309004.1 150016750 5293092 complement(2173588..2174058) 1 NC_009617.1 TIGRFAM: Sporulation protein YtfJ; KEGG: cpr:CPR_1772 hypothetical protein; sporulation protein YtfJ 2174058 5293092 Cbei_1877 Clostridium beijerinckii NCIMB 8052 sporulation protein YtfJ YP_001309004.1 2173588 R 290402 CDS YP_001309005.1 150016751 5293093 complement(2174082..2174624) 1 NC_009617.1 KEGG: cpr:CPR_1771 hypothetical protein; hypothetical protein 2174624 5293093 Cbei_1878 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309005.1 2174082 R 290402 CDS YP_001309006.1 150016752 5293094 2174766..2175620 1 NC_009617.1 PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; KEGG: cpr:CPR_1770 penicillin-binding protein 5* precursor; serine-type D-Ala-D-Ala carboxypeptidase 2175620 5293094 Cbei_1879 Clostridium beijerinckii NCIMB 8052 serine-type D-Ala-D-Ala carboxypeptidase YP_001309006.1 2174766 D 290402 CDS YP_001309007.1 150016753 5293095 2175821..2176810 1 NC_009617.1 KEGG: cpe:CPE1800 hypothetical protein; hypothetical protein 2176810 5293095 Cbei_1880 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309007.1 2175821 D 290402 CDS YP_001309008.1 150016754 5293096 2176807..2178084 1 NC_009617.1 PFAM: glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cpe:CPE1799 hypothetical protein; glucose-inhibited division protein A 2178084 5293096 Cbei_1881 Clostridium beijerinckii NCIMB 8052 glucose-inhibited division protein A YP_001309008.1 2176807 D 290402 CDS YP_001309009.1 150016755 5293097 2178333..2178737 1 NC_009617.1 KEGG: cpf:CPF_0742 hypothetical protein; hypothetical protein 2178737 5293097 Cbei_1882 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309009.1 2178333 D 290402 CDS YP_001309010.1 150016756 5293098 2178974..2180470 1 NC_009617.1 PFAM: amino acid permease-associated region; KEGG: tte:TTE0446 amino acid transporters; amino acid permease-associated protein 2180470 5293098 Cbei_1883 Clostridium beijerinckii NCIMB 8052 amino acid permease-associated protein YP_001309010.1 2178974 D 290402 CDS YP_001309011.1 150016757 5293099 2180550..2181200 1 NC_009617.1 hypothetical protein 2181200 5293099 Cbei_1884 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309011.1 2180550 D 290402 CDS YP_001309012.1 150016758 5293100 2181193..2181591 1 NC_009617.1 PFAM: GntR family transcriptional regulator; KEGG: cno:NT01CX_0244 transcriptional regulator, GntR family; GntR family transcriptional regulator 2181591 5293100 Cbei_1885 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001309012.1 2181193 D 290402 CDS YP_001309013.1 150016759 5293101 2181575..2182471 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ctc:CTC01985 ABC transporter ATP-binding protein; ABC transporter 2182471 5293101 Cbei_1886 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001309013.1 2181575 D 290402 CDS YP_001309014.1 150016760 5293102 2182452..2183519 1 NC_009617.1 KEGG: cno:NT01CX_0242 membrane spanning protein; hypothetical protein 2183519 5293102 Cbei_1887 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309014.1 2182452 D 290402 CDS YP_001309015.1 150016761 5293103 2183680..2183949 1 NC_009617.1 KEGG: cel:ZK643.8 GRound-Like (grd related); hypothetical protein 2183949 5293103 Cbei_1888 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309015.1 2183680 D 290402 CDS YP_001309016.1 150016762 5293104 2184143..2184853 1 NC_009617.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cpf:CPF_1336 ribosomal small subunit pseudouridine synthase B; pseudouridine synthase 2184853 5293104 Cbei_1889 Clostridium beijerinckii NCIMB 8052 pseudouridine synthase YP_001309016.1 2184143 D 290402 CDS YP_001309017.1 150016763 5293105 2185079..2185975 1 NC_009617.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: cpr:CPR_1149 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 2185975 5293105 Cbei_1890 Clostridium beijerinckii NCIMB 8052 RpiR family transcriptional regulator YP_001309017.1 2185079 D 290402 CDS YP_001309018.1 150016764 5293106 2186082..2187413 1 NC_009617.1 PFAM: Polynucleotide adenylyltransferase region; KEGG: ctc:CTC01205 tRNA nucleotidyltransferase (CCA-adding enzyme); tRNA adenylyltransferase 2187413 5293106 Cbei_1891 Clostridium beijerinckii NCIMB 8052 tRNA adenylyltransferase YP_001309018.1 2186082 D 290402 CDS YP_001309019.1 150016765 5293107 2187680..2188711 1 NC_009617.1 PFAM: domain of unknown function DUF1745; KEGG: ppd:Ppro_3141 domain of unknown function DUF1745; hypothetical protein 2188711 5293107 Cbei_1892 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309019.1 2187680 D 290402 CDS YP_001309020.1 150016766 5293108 2188726..2189685 1 NC_009617.1 PFAM: chemotaxis sensory transducer; KEGG: tma:TM1428 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2189685 5293108 Cbei_1893 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001309020.1 2188726 D 290402 CDS YP_001309021.1 150016767 5293109 2189921..2190190 1 NC_009617.1 KEGG: tte:TTE1271 hypothetical protein; hypothetical protein 2190190 5293109 Cbei_1894 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309021.1 2189921 D 290402 CDS YP_001309022.1 150016768 5293110 complement(2190278..2191072) 1 NC_009617.1 PFAM: protein of unknown function DUF477; KEGG: ctc:CTC00359 hypothetical protein; hypothetical protein 2191072 5293110 Cbei_1895 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309022.1 2190278 R 290402 CDS YP_001309023.1 150016769 5293111 complement(2191069..2191635) 1 NC_009617.1 PFAM: LemA family protein; KEGG: ctc:CTC00358 lemA-like protein; LemA family protein 2191635 5293111 Cbei_1896 Clostridium beijerinckii NCIMB 8052 LemA family protein YP_001309023.1 2191069 R 290402 CDS YP_001309024.1 150016770 5293112 2191918..2192838 1 NC_009617.1 PFAM: Mg2+ transporter protein, CorA family protein; KEGG: tde:TDE1034 magnesium and cobalt transporter; Mg2+ transporter protein, CorA family protein 2192838 5293112 Cbei_1897 Clostridium beijerinckii NCIMB 8052 Mg2+ transporter protein, CorA family protein YP_001309024.1 2191918 D 290402 CDS YP_001309025.1 150016771 5293113 complement(2192916..2193962) 1 NC_009617.1 TIGRFAM: calcium/proton antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: cpf:CPF_1624 calcium/proton exchanger; calcium/cation antiporter 2193962 5293113 Cbei_1898 Clostridium beijerinckii NCIMB 8052 calcium/cation antiporter YP_001309025.1 2192916 R 290402 CDS YP_001309026.1 150016772 5293114 2194300..2194677 1 NC_009617.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cpr:CPR_0440 lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase 2194677 5293114 Cbei_1899 Clostridium beijerinckii NCIMB 8052 glyoxalase/bleomycin resistance protein/dioxygenase YP_001309026.1 2194300 D 290402 CDS YP_001309027.1 150016773 5293115 2194855..2196888 1 NC_009617.1 PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; NTF2 domain protein N-terminal transpeptidase; KEGG: cac:CAC3683 penicillin-binding protein 2 (serine-type D-Ala-D-Ala carboxypeptidase); peptidoglycan glycosyltransferase 2196888 5293115 Cbei_1900 Clostridium beijerinckii NCIMB 8052 peptidoglycan glycosyltransferase YP_001309027.1 2194855 D 290402 CDS YP_001309028.1 150016774 5293116 complement(2197026..2198375) 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; hydrogenase large subunit domain protein; KEGG: cpe:CPE0276 probable hydrogenase; hydrogenase large subunit 2198375 5293116 Cbei_1901 Clostridium beijerinckii NCIMB 8052 hydrogenase large subunit YP_001309028.1 2197026 R 290402 CDS YP_001309029.1 150016775 5293117 2198488..2198979 1 NC_009617.1 hypothetical protein 2198979 5293117 Cbei_1902 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309029.1 2198488 D 290402 CDS YP_001309030.1 150016776 5293118 complement(2199060..2199926) 1 NC_009617.1 TIGRFAM: ketose-bisphosphate aldolase; fructose-1,6-bisphosphate aldolase, class II; PFAM: ketose-bisphosphate aldolase, class-II; KEGG: cpr:CPR_1350 fructose-1,6-bisphosphate aldolase, class II; fructose-1,6-bisphosphate aldolase 2199926 5293118 Cbei_1903 Clostridium beijerinckii NCIMB 8052 fructose-1,6-bisphosphate aldolase YP_001309030.1 2199060 R 290402 CDS YP_001309031.1 150016777 5293119 2200432..2200929 1 NC_009617.1 PFAM: transcription factor CarD; KEGG: btl:BALH_4288 transcriptional regulator, CarD family; CarD family transcriptional regulator 2200929 5293119 Cbei_1904 Clostridium beijerinckii NCIMB 8052 CarD family transcriptional regulator YP_001309031.1 2200432 D 290402 CDS YP_001309032.1 150016778 5293120 2201073..2201228 1 NC_009617.1 KEGG: cpf:CPF_2926 hypothetical protein; hypothetical protein 2201228 5293120 Cbei_1905 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309032.1 2201073 D 290402 CDS YP_001309033.1 150016779 5296355 2201777..2202058 1 NC_009617.1 hypothetical protein 2202058 5296355 Cbei_1907 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309033.1 2201777 D 290402 CDS YP_001309034.1 150016780 5293122 2202186..2203586 1 NC_009617.1 KEGG: gka:GK0660 hypothetical protein; hypothetical protein 2203586 5293122 Cbei_1908 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309034.1 2202186 D 290402 CDS YP_001309035.1 150016781 5293123 2203817..2204428 1 NC_009617.1 KEGG: lca:LSEI_0621 predicted membrane protein; hypothetical protein 2204428 5293123 Cbei_1909 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309035.1 2203817 D 290402 CDS YP_001309036.1 150016782 5293124 2204805..2206199 1 NC_009617.1 PFAM: FAD dependent oxidoreductase; KEGG: cno:NT01CX_0904 NAD(FAD)-utilizing dehydrogenase; FAD dependent oxidoreductase 2206199 5293124 Cbei_1910 Clostridium beijerinckii NCIMB 8052 FAD dependent oxidoreductase YP_001309036.1 2204805 D 290402 CDS YP_001309037.1 150016783 5293125 2207254..2207457 1 NC_009617.1 hypothetical protein 2207457 5293125 Cbei_1911 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309037.1 2207254 D 290402 CDS YP_001309038.1 150016784 5293126 2207669..2207842 1 NC_009617.1 hypothetical protein 2207842 5293126 Cbei_1912 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309038.1 2207669 D 290402 CDS YP_001309039.1 150016785 5293127 complement(2207933..2208481) 1 NC_009617.1 PFAM: BioY protein; KEGG: ctc:CTC02091 bioY protein; BioY protein 2208481 5293127 Cbei_1913 Clostridium beijerinckii NCIMB 8052 BioY protein YP_001309039.1 2207933 R 290402 CDS YP_001309040.1 150016786 5293128 complement(2208529..2209479) 1 NC_009617.1 KEGG: cpf:CPF_1795 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 2209479 5293128 Cbei_1914 Clostridium beijerinckii NCIMB 8052 biotin synthase YP_001309040.1 2208529 R 290402 CDS YP_001309041.1 150016787 5293129 2209859..2210323 1 NC_009617.1 KEGG: cpf:CPF_2252 hypothetical protein; hypothetical protein 2210323 5293129 Cbei_1915 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309041.1 2209859 D 290402 CDS YP_001309042.1 150016788 5293130 2210489..2211166 1 NC_009617.1 PFAM: protein of unknown function DUF541; KEGG: ctc:CTC01814 periplasmic immunogenic protein; hypothetical protein 2211166 5293130 Cbei_1916 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309042.1 2210489 D 290402 CDS YP_001309043.1 150016789 5293131 2211859..2212773 1 NC_009617.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase 2212773 murQ 5293131 murQ Clostridium beijerinckii NCIMB 8052 N-acetylmuramic acid 6-phosphate etherase YP_001309043.1 2211859 D 290402 CDS YP_001309044.1 150016790 5293132 2212788..2214149 1 NC_009617.1 PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: stm:STM2570 PTS system, sucrose-specific IIBC component; phosphotransferase system, EIIC 2214149 5293132 Cbei_1918 Clostridium beijerinckii NCIMB 8052 phosphotransferase system, EIIC YP_001309044.1 2212788 D 290402 CDS YP_001309045.1 150016791 5293133 2214292..2215365 1 NC_009617.1 PFAM: protein of unknown function DUF871; KEGG: bca:BCE_0915 hypothetical protein; hypothetical protein 2215365 5293133 Cbei_1919 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309045.1 2214292 D 290402 CDS YP_001309046.1 150016792 5293134 2215404..2216249 1 NC_009617.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: tte:TTE0211 transcriptional regulator; RpiR family transcriptional regulator 2216249 5293134 Cbei_1920 Clostridium beijerinckii NCIMB 8052 RpiR family transcriptional regulator YP_001309046.1 2215404 D 290402 CDS YP_001309047.1 150016793 5293135 complement(2216753..2217631) 1 NC_009617.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pau:PA14_03830 N-carbamoylputrescine amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2217631 5293135 Cbei_1921 Clostridium beijerinckii NCIMB 8052 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001309047.1 2216753 R 290402 CDS YP_001309048.1 150016794 5293136 complement(2217654..2218697) 1 NC_009617.1 PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: lpf:lpl0005 hypothetical protein; agmatine deiminase 2218697 5293136 Cbei_1922 Clostridium beijerinckii NCIMB 8052 agmatine deiminase YP_001309048.1 2217654 R 290402 CDS YP_001309049.1 150016795 5293137 2219030..2220235 1 NC_009617.1 PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BG10025 similar to antibiotic resistance protein; major facilitator superfamily transporter 2220235 5293137 Cbei_1923 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001309049.1 2219030 D 290402 CDS YP_001309050.1 150016796 5296356 2221007..2222644 1 NC_009617.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 2222644 5296356 Cbei_1924 Clostridium beijerinckii NCIMB 8052 aspartate aminotransferase YP_001309050.1 2221007 D 290402 CDS YP_001309051.1 150016797 5293139 complement(2222695..2223213) 1 NC_009617.1 KEGG: cac:CAC0207 hypothetical protein, CF-6 family; hypothetical protein 2223213 5293139 Cbei_1925 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309051.1 2222695 R 290402 CDS YP_001309052.1 150016798 5293140 complement(2223480..2224025) 1 NC_009617.1 PFAM: transcriptional regulator PadR family protein; KEGG: cac:CAC3370 predicted transcriptional regulator; PadR-like family transcriptional regulator 2224025 5293140 Cbei_1926 Clostridium beijerinckii NCIMB 8052 PadR-like family transcriptional regulator YP_001309052.1 2223480 R 290402 CDS YP_001309053.1 150016799 5293141 2224235..2226229 1 NC_009617.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cac:CAC3371 2-enoate reductase (two distinct NAD(FAD)-dependent dehydrogenase domains); NADH:flavin oxidoreductase 2226229 5293141 Cbei_1927 Clostridium beijerinckii NCIMB 8052 NADH:flavin oxidoreductase YP_001309053.1 2224235 D 290402 CDS YP_001309054.1 150016800 5293142 2226825..2227610 1 NC_009617.1 KEGG: cth:Cthe_1219 hypothetical protein; hypothetical protein 2227610 5293142 Cbei_1928 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309054.1 2226825 D 290402 CDS YP_001309055.1 150016801 5293143 complement(2227645..2229132) 1 NC_009617.1 PFAM: protein kinase; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; KEGG: ctc:CTC01225 serine/threonine protein kinase; protein kinase 2229132 5293143 Cbei_1929 Clostridium beijerinckii NCIMB 8052 protein kinase YP_001309055.1 2227645 R 290402 CDS YP_001309056.1 150016802 5293144 2229556..2229924 1 NC_009617.1 KEGG: ctc:CTC00548 hypothetical protein; hypothetical protein 2229924 5293144 Cbei_1930 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309056.1 2229556 D 290402 CDS YP_001309057.1 150016803 5293145 2230091..2230549 1 NC_009617.1 KEGG: cac:CAC0803 hypothetical protein; hypothetical protein 2230549 5293145 Cbei_1931 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309057.1 2230091 D 290402 CDS YP_001309058.1 150016804 5293146 2230915..2232093 1 NC_009617.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: msu:MS0883 hypothetical protein; iron-containing alcohol dehydrogenase 2232093 5293146 Cbei_1932 Clostridium beijerinckii NCIMB 8052 iron-containing alcohol dehydrogenase YP_001309058.1 2230915 D 290402 CDS YP_001309059.1 150016805 5293147 2232294..2233571 1 NC_009617.1 PFAM: glucose-inhibited division protein A; HI0933 family protein; KEGG: ctc:CTC01382 hypothetical protein; glucose-inhibited division protein A 2233571 5293147 Cbei_1933 Clostridium beijerinckii NCIMB 8052 glucose-inhibited division protein A YP_001309059.1 2232294 D 290402 CDS YP_001309060.1 150016806 5293148 2233848..2234207 1 NC_009617.1 hypothetical protein 2234207 5293148 Cbei_1934 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309060.1 2233848 D 290402 CDS YP_001309061.1 150016807 5293149 2234469..2235623 1 NC_009617.1 PFAM: purine catabolism PurC domain protein; KEGG: cac:CAC1426 possible transcriptional regulator from leucine-rich protein (LRPR) family; PucR family transcriptional regulator 2235623 5293149 Cbei_1935 Clostridium beijerinckii NCIMB 8052 PucR family transcriptional regulator YP_001309061.1 2234469 D 290402 CDS YP_001309062.1 150016808 5293150 2235811..2237136 1 NC_009617.1 PFAM: aminotransferase class-III; KEGG: rha:RHA1_ro04469 4-aminobutyrate transaminase; class III aminotransferase 2237136 5293150 Cbei_1936 Clostridium beijerinckii NCIMB 8052 class III aminotransferase YP_001309062.1 2235811 D 290402 CDS YP_001309063.1 150016809 5293151 2237150..2238301 1 NC_009617.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: cpf:CPF_0080 alcohol dehydrogenase, iron-containing; iron-containing alcohol dehydrogenase 2238301 5293151 Cbei_1937 Clostridium beijerinckii NCIMB 8052 iron-containing alcohol dehydrogenase YP_001309063.1 2237150 D 290402 CDS YP_001309064.1 150016810 5293152 2238374..2239207 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rle:RL3720 ATP-binding component of ABC transporter; ABC transporter 2239207 5293152 Cbei_1938 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001309064.1 2238374 D 290402 CDS YP_001309065.1 150016811 5293153 2239210..2239986 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_128GM hypothetical protein; binding-protein-dependent transport system inner membrane protein 2239986 5293153 Cbei_1939 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001309065.1 2239210 D 290402 CDS YP_001309066.1 150016812 5293154 2239999..2240766 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_3097 ABC transporter permease; binding-protein-dependent transport system inner membrane protein 2240766 5293154 Cbei_1940 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001309066.1 2239999 D 290402 CDS YP_001309067.1 150016813 5293155 2240922..2241983 1 NC_009617.1 PFAM: NMT1/THI5 like; KEGG: fal:FRAAL1422 ABC transporter substrate binding protein; NMT1/THI5-like protein 2241983 5293155 Cbei_1941 Clostridium beijerinckii NCIMB 8052 NMT1/THI5-like protein YP_001309067.1 2240922 D 290402 CDS YP_001309068.1 150016814 5293156 2242224..2243591 1 NC_009617.1 TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: ehi:189.t00008 D-hydantoinase; dihydropyrimidinase 2243591 5293156 Cbei_1942 Clostridium beijerinckii NCIMB 8052 dihydropyrimidinase YP_001309068.1 2242224 D 290402 CDS YP_001309069.1 150016815 5293157 2243681..2245234 1 NC_009617.1 catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines; dihydropyrimidine dehydrogenase 2245234 5293157 Cbei_1943 Clostridium beijerinckii NCIMB 8052 dihydropyrimidine dehydrogenase YP_001309069.1 2243681 D 290402 CDS YP_001309070.1 150016816 5293158 2245267..2246487 1 NC_009617.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 2246487 5293158 Cbei_1944 Clostridium beijerinckii NCIMB 8052 allantoate amidohydrolase YP_001309070.1 2245267 D 290402 CDS YP_001309071.1 150016817 5293159 complement(2246597..2247031) 1 NC_009617.1 PFAM: CBS domain containing protein; KEGG: ctc:CTC00347 inosine-5-monophosphate dehydrogenase related protein; signal-transduction protein 2247031 5293159 Cbei_1945 Clostridium beijerinckii NCIMB 8052 signal-transduction protein YP_001309071.1 2246597 R 290402 CDS YP_001309072.1 150016818 5293160 2247312..2248268 1 NC_009617.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: ppd:Ppro_1810 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 2248268 5293160 Cbei_1946 Clostridium beijerinckii NCIMB 8052 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit YP_001309072.1 2247312 D 290402 CDS YP_001309073.1 150016819 5293161 complement(2248425..2249249) 1 NC_009617.1 KEGG: art:Arth_1808 Zn-dependent hydrolases of the beta-lactamase fold-like protein; beta-lactamase fold-like Zn-dependent hydrolase 2249249 5293161 Cbei_1947 Clostridium beijerinckii NCIMB 8052 beta-lactamase fold-like Zn-dependent hydrolase YP_001309073.1 2248425 R 290402 CDS YP_001309074.1 150016820 5293162 2249404..2249967 1 NC_009617.1 KEGG: cth:Cthe_2999 hypothetical protein; hypothetical protein 2249967 5293162 Cbei_1948 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309074.1 2249404 D 290402 CDS YP_001309075.1 150016821 5293163 2250460..2251107 1 NC_009617.1 KEGG: rpa:RPA1434 hypothetical protein; hypothetical protein 2251107 5293163 Cbei_1949 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309075.1 2250460 D 290402 CDS YP_001309076.1 150016822 5293164 2251153..2252718 1 NC_009617.1 KEGG: dsy:DSY3734 hypothetical protein; hypothetical protein 2252718 5293164 Cbei_1950 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309076.1 2251153 D 290402 CDS YP_001309077.1 150016823 5293165 2252940..2254043 1 NC_009617.1 KEGG: lin:lin1229 hypothetical protein; hypothetical protein 2254043 5293165 Cbei_1951 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309077.1 2252940 D 290402 CDS YP_001309078.1 150016824 5296360 2260171..2261739 1 NC_009617.1 KEGG: pfa:PFL0350c hypothetical protein; hypothetical protein 2261739 5296360 Cbei_1952 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309078.1 2260171 D 290402 CDS YP_001309079.1 150016825 5293167 2261830..2263230 1 NC_009617.1 PFAM: aldehyde dehydrogenase; KEGG: sav:SAV1920 aldehyde dehydrogenase; aldehyde dehydrogenase 2263230 5293167 Cbei_1953 Clostridium beijerinckii NCIMB 8052 aldehyde dehydrogenase YP_001309079.1 2261830 D 290402 CDS YP_001309080.1 150016826 5293168 complement(2263415..2264584) 1 NC_009617.1 PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC0560 integral membrane protein similar to antibiotic resistance protein B.subtilis; major facilitator superfamily transporter 2264584 5293168 Cbei_1954 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001309080.1 2263415 R 290402 CDS YP_001309081.1 150016827 5293169 complement(2264666..2265109) 1 NC_009617.1 PFAM: regulatory protein, MarR; Helix-turn-helix, type 11 domain protein; KEGG: cac:CAC0559 transcriptional regulator, MarR/EmrR family; MarR family transcriptional regulator 2265109 5293169 Cbei_1955 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001309081.1 2264666 R 290402 CDS YP_001309082.1 150016828 5293170 2265316..2265792 1 NC_009617.1 KEGG: cac:CAC0275 hypothetical protein; hypothetical protein 2265792 5293170 Cbei_1956 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309082.1 2265316 D 290402 CDS YP_001309083.1 150016829 5296364 2271363..2271776 1 NC_009617.1 PFAM: thioesterase superfamily protein; KEGG: cth:Cthe_1260 4-hydroxybenzoyl-CoA thioesterase; thioesterase superfamily protein 2271776 5296364 Cbei_1957 Clostridium beijerinckii NCIMB 8052 thioesterase superfamily protein YP_001309083.1 2271363 D 290402 CDS YP_001309084.1 150016830 5293172 complement(2271851..2272357) 1 NC_009617.1 KEGG: dsy:DSY1430 hypothetical protein; hypothetical protein 2272357 5293172 Cbei_1958 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309084.1 2271851 R 290402 CDS YP_001309085.1 150016831 5293173 complement(2272464..2273345) 1 NC_009617.1 PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: ctc:CTC00153 transcriptional regulatory protein; LysR family transcriptional regulator 2273345 5293173 Cbei_1959 Clostridium beijerinckii NCIMB 8052 LysR family transcriptional regulator YP_001309085.1 2272464 R 290402 CDS YP_001309086.1 150016832 5293174 2273478..2274401 1 NC_009617.1 PFAM: Ketopantoate reductase ApbA/PanE, N-terminal domain protein; Ketopantoate reductase ApbA/PanE, C-terminal domain protein; KEGG: sfu:Sfum_1736 2-dehydropantoate 2-reductase; 2-dehydropantoate 2-reductase 2274401 5293174 Cbei_1960 Clostridium beijerinckii NCIMB 8052 2-dehydropantoate 2-reductase YP_001309086.1 2273478 D 290402 CDS YP_001309087.1 150016833 5293175 2274613..2275395 1 NC_009617.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: tte:TTE0069 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short-chain dehydrogenase/reductase SDR 2275395 5293175 Cbei_1961 Clostridium beijerinckii NCIMB 8052 short-chain dehydrogenase/reductase SDR YP_001309087.1 2274613 D 290402 CDS YP_001309088.1 150016834 5293176 2275561..2276193 1 NC_009617.1 TIGRFAM: Sporulation stage II, protein M; PFAM: protein of unknown function DUF95, transmembrane; KEGG: cac:CAC2068 sporulation factor SpoIIM, uncharacterized membrane protein; sporulation stage II, protein M 2276193 5293176 Cbei_1962 Clostridium beijerinckii NCIMB 8052 sporulation stage II, protein M YP_001309088.1 2275561 D 290402 CDS YP_001309089.1 150016835 5293177 2276276..2277154 1 NC_009617.1 PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: cpf:CPF_2063 tyrosine recombinase XerD; phage integrase family protein 2277154 5293177 Cbei_1963 Clostridium beijerinckii NCIMB 8052 phage integrase family protein YP_001309089.1 2276276 D 290402 CDS YP_001309090.1 150016836 5293178 2279037..2279981 1 NC_009617.1 PFAM: polysaccharide deacetylase; KEGG: cpf:CPF_0823 polysaccharide deacetylase family protein; polysaccharide deacetylase 2279981 5293178 Cbei_1964 Clostridium beijerinckii NCIMB 8052 polysaccharide deacetylase YP_001309090.1 2279037 D 290402 CDS YP_001309091.1 150016837 5293179 complement(2280188..2281237) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ava:Ava_0243 molybdate ABC transporter permease; ABC transporter 2281237 5293179 Cbei_1965 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001309091.1 2280188 R 290402 CDS YP_001309092.1 150016838 5293180 complement(2281237..2281914) 1 NC_009617.1 TIGRFAM: molybdate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ter:Tery_4148 molybdate ABC transporter inner membrane subunit; molybdate ABC transporter inner membrane subunit 2281914 5293180 Cbei_1966 Clostridium beijerinckii NCIMB 8052 molybdate ABC transporter inner membrane subunit YP_001309092.1 2281237 R 290402 CDS YP_001309093.1 150016839 5293181 2282473..2283783 1 NC_009617.1 Zn-dependent extracellular dipeptidase; similar to succinyl-diaminopimelate desuccinylases; peptidase 2283783 5293181 Cbei_1967 Clostridium beijerinckii NCIMB 8052 peptidase YP_001309093.1 2282473 D 290402 CDS YP_001309094.1 150016840 5293182 2283820..2285013 1 NC_009617.1 PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; KEGG: efa:EF2577 ornithine carbamoyltransferase; aspartate/ornithine carbamoyltransferase family protein 2285013 5293182 Cbei_1968 Clostridium beijerinckii NCIMB 8052 aspartate/ornithine carbamoyltransferase family protein YP_001309094.1 2283820 D 290402 CDS YP_001309095.1 150016841 5293183 2285184..2286104 1 NC_009617.1 catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 2286104 5293183 Cbei_1969 Clostridium beijerinckii NCIMB 8052 carbamate kinase YP_001309095.1 2285184 D 290402 CDS YP_001309096.1 150016842 5293184 2286761..2288137 1 NC_009617.1 catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; phenylhydantoinase 2288137 5293184 Cbei_1970 Clostridium beijerinckii NCIMB 8052 phenylhydantoinase YP_001309096.1 2286761 D 290402 CDS YP_001309097.1 150016843 5293185 2288264..2288905 1 NC_009617.1 PFAM: YheO domain protein; KEGG: efa:EF2583 hypothetical protein; YheO domain-containing protein 2288905 5293185 Cbei_1971 Clostridium beijerinckii NCIMB 8052 YheO domain-containing protein YP_001309097.1 2288264 D 290402 CDS YP_001309098.1 150016844 5293186 2289310..2290593 1 NC_009617.1 TIGRFAM: Guanine deaminase; PFAM: amidohydrolase; KEGG: cac:CAC0282 cytosine/guanine deaminase related protein; guanine deaminase 2290593 5293186 Cbei_1972 Clostridium beijerinckii NCIMB 8052 guanine deaminase YP_001309098.1 2289310 D 290402 CDS YP_001309099.1 150016845 5293187 2290750..2293767 1 NC_009617.1 with YgfM and YgfN forms a selenate reductase, which seems to catalyze the reduction of selenate to selenite; YgfK mutants are unable to reduce selenate; involved in purine salvage process; seems to act as an oxidoreductase, but sequence similarity suggests it is a dihydrothymine dehydrogenase; selenate reductase subunit YgfK 2293767 5293187 Cbei_1973 Clostridium beijerinckii NCIMB 8052 selenate reductase subunit YgfK YP_001309099.1 2290750 D 290402 CDS YP_001309100.1 150016846 5293188 2293929..2295353 1 NC_009617.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: cno:NT01CX_2417 guanine-hypoxanthine permease; xanthine/uracil/vitamin C permease 2295353 5293188 Cbei_1974 Clostridium beijerinckii NCIMB 8052 xanthine/uracil/vitamin C permease YP_001309100.1 2293929 D 290402 CDS YP_001309101.1 150016847 5293189 2295746..2297452 1 NC_009617.1 TIGRFAM: adenine deaminase; PFAM: amidohydrolase; KEGG: cac:CAC0887 adenine deaminase; adenine deaminase 2297452 5293189 Cbei_1975 Clostridium beijerinckii NCIMB 8052 adenine deaminase YP_001309101.1 2295746 D 290402 CDS YP_001309102.1 150016848 5293190 2297480..2298091 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: dsy:DSY1100 hypothetical protein; TetR family transcriptional regulator 2298091 5293190 Cbei_1976 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001309102.1 2297480 D 290402 CDS YP_001309103.1 150016849 5293191 2298138..2299340 1 NC_009617.1 catalyzes the formation of pyruvate from 2,3-diaminopropionate; diaminopropionate ammonia-lyase 2299340 5293191 Cbei_1977 Clostridium beijerinckii NCIMB 8052 diaminopropionate ammonia-lyase YP_001309103.1 2298138 D 290402 CDS YP_001309104.1 150016850 5293192 2299624..2300952 1 NC_009617.1 in Escherichia coli expression is induced in response to phase-specific signals and controlled by RpoS; chlorohydrolase/aminohydrolase 2300952 5293192 Cbei_1978 Clostridium beijerinckii NCIMB 8052 chlorohydrolase/aminohydrolase YP_001309104.1 2299624 D 290402 CDS YP_001309105.1 150016851 5293193 2301037..2301414 1 NC_009617.1 TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: cpr:CPR_1089 endoribonuclease L-PSP; endoribonuclease L-PSP 2301414 5293193 Cbei_1979 Clostridium beijerinckii NCIMB 8052 endoribonuclease L-PSP YP_001309105.1 2301037 D 290402 CDS YP_001309106.1 150016852 5293194 2301495..2302562 1 NC_009617.1 PFAM: protein of unknown function DUF182; KEGG: ctc:CTC01880 alcohol dehydrogenase [cytochrome c-553], gamma chain-like protein; hypothetical protein 2302562 5293194 Cbei_1980 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309106.1 2301495 D 290402 CDS YP_001309107.1 150016853 5293195 2302618..2303964 1 NC_009617.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: bld:BLi02347 xanthine permease; RBL01134; uracil-xanthine permease 2303964 5293195 Cbei_1981 Clostridium beijerinckii NCIMB 8052 uracil-xanthine permease YP_001309107.1 2302618 D 290402 CDS YP_001309108.1 150016854 5293196 2304390..2306957 1 NC_009617.1 PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: efa:EF2570 aldehyde oxidoreductase; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit 2306957 5293196 Cbei_1982 Clostridium beijerinckii NCIMB 8052 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit YP_001309108.1 2304390 D 290402 CDS YP_001309109.1 150016855 5293197 2307010..2307621 1 NC_009617.1 KEGG: dsy:DSY1981 hypothetical protein; hypothetical protein 2307621 5293197 Cbei_1983 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309109.1 2307010 D 290402 CDS YP_001309110.1 150016856 5293198 2307752..2309866 1 NC_009617.1 PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: ppd:Ppro_1446 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; xanthine dehydrogenase 2309866 5293198 Cbei_1984 Clostridium beijerinckii NCIMB 8052 xanthine dehydrogenase YP_001309110.1 2307752 D 290402 CDS YP_001309111.1 150016857 5293199 2309866..2310333 1 NC_009617.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: ppd:Ppro_1445 (2Fe-2S)-binding domain protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein 2310333 5293199 Cbei_1985 Clostridium beijerinckii NCIMB 8052 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_001309111.1 2309866 D 290402 CDS YP_001309112.1 150016858 5293200 2310327..2311145 1 NC_009617.1 PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: swo:Swol_1137 conserved hypothetical dehydrogenase; FAD-binding molybdopterin dehydrogenase 2311145 5293200 Cbei_1986 Clostridium beijerinckii NCIMB 8052 FAD-binding molybdopterin dehydrogenase YP_001309112.1 2310327 D 290402 CDS YP_001309113.1 150016859 5293201 2311566..2312495 1 NC_009617.1 PFAM: LysR family transcriptional regulator; KEGG: swo:Swol_1816 hypothetical protein; LysR family transcriptional regulator 2312495 5293201 Cbei_1987 Clostridium beijerinckii NCIMB 8052 LysR family transcriptional regulator YP_001309113.1 2311566 D 290402 CDS YP_001309114.1 150016860 5293202 2312703..2313722 1 NC_009617.1 PFAM: molybdopterin binding domain; KEGG: cpf:CPF_2046 molybdenum cofactor biosynthesis protein; molybdopterin binding domain-containing protein 2313722 5293202 Cbei_1988 Clostridium beijerinckii NCIMB 8052 molybdopterin binding domain-containing protein YP_001309114.1 2312703 D 290402 CDS YP_001309115.1 150016861 5293203 2313892..2314866 1 NC_009617.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cpe:CPE1790 molybdenum cofactor biosynthesis protein A; molybdenum cofactor biosynthesis protein A 2314866 5293203 Cbei_1989 Clostridium beijerinckii NCIMB 8052 molybdenum cofactor biosynthesis protein A YP_001309115.1 2313892 D 290402 CDS YP_001309116.1 150016862 5293204 2314946..2315425 1 NC_009617.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 2315425 moaC 5293204 moaC Clostridium beijerinckii NCIMB 8052 molybdenum cofactor biosynthesis protein MoaC YP_001309116.1 2314946 D 290402 CDS YP_001309117.1 150016863 5293205 2315425..2315856 1 NC_009617.1 PFAM: MOSC domain containing protein; KEGG: cac:CAC1991 uncharacterized protein, YIIM family; MOSC domain-containing protein 2315856 5293205 Cbei_1991 Clostridium beijerinckii NCIMB 8052 MOSC domain-containing protein YP_001309117.1 2315425 D 290402 CDS YP_001309118.1 150016864 5293206 complement(2315913..2316716) 1 NC_009617.1 TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: ter:Tery_4147 molybdenum ABC transporter periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 2316716 5293206 Cbei_1992 Clostridium beijerinckii NCIMB 8052 molybdenum ABC transporter periplasmic molybdate-binding protein YP_001309118.1 2315913 R 290402 CDS YP_001309119.1 150016865 5293207 2317350..2317556 1 NC_009617.1 PFAM: TOBE domain protein; KEGG: hit:NTHI1793 probable molybdenum-pterin binding protein; TOBE domain-containing protein 2317556 5293207 Cbei_1993 Clostridium beijerinckii NCIMB 8052 TOBE domain-containing protein YP_001309119.1 2317350 D 290402 CDS YP_001309120.1 150016866 5293208 2317881..2319398 1 NC_009617.1 PFAM: ABC transporter; cobalamin synthesis protein, P47K; SMART: ATPase AAA; KEGG: swo:Swol_2095 hypothetical protein; ABC transporter 2319398 5293208 Cbei_1994 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001309120.1 2317881 D 290402 CDS YP_001309121.1 150016867 5293209 2319609..2320571 1 NC_009617.1 KEGG: ppd:Ppro_0344 hypothetical protein; hypothetical protein 2320571 5293209 Cbei_1995 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309121.1 2319609 D 290402 CDS YP_001309122.1 150016868 5293210 2320633..2321598 1 NC_009617.1 TIGRFAM: DNA binding domain, excisionase family; KEGG: cac:CAC0252 molybdate-binding protein; DNA binding domain-containing protein 2321598 5293210 Cbei_1996 Clostridium beijerinckii NCIMB 8052 DNA binding domain-containing protein YP_001309122.1 2320633 D 290402 CDS YP_001309123.1 150016869 5293211 2321755..2322363 1 NC_009617.1 KEGG: mba:Mbar_A2471 hypothetical protein; hypothetical protein 2322363 5293211 Cbei_1997 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309123.1 2321755 D 290402 CDS YP_001309124.1 150016870 5293212 2322356..2323330 1 NC_009617.1 KEGG: cac:CAC3660 uncharacterized protein, homolog of Desulfovibrio gigas (gi:6978031); hypothetical protein 2323330 5293212 Cbei_1998 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309124.1 2322356 D 290402 CDS YP_001309125.1 150016871 5293213 2323975..2324796 1 NC_009617.1 TIGRFAM: nitrogenase iron protein; PFAM: NifH/frxC-family protein; KEGG: cac:CAC0253 nitrogenase iron protein (nitrogenase component II) gene nifH; nitrogenase iron protein 2324796 5293213 Cbei_1999 Clostridium beijerinckii NCIMB 8052 nitrogenase iron protein YP_001309125.1 2323975 D 290402 CDS YP_001309126.1 150016872 5293214 2325086..2325412 1 NC_009617.1 PFAM: nitrogen regulatory protein P-II; KEGG: cac:CAC0254 nitrogen regulatory protein PII (nitrogen fixation nifHD); nitrogen regulatory protein P-II 2325412 5293214 Cbei_2000 Clostridium beijerinckii NCIMB 8052 nitrogen regulatory protein P-II YP_001309126.1 2325086 D 290402 CDS YP_001309127.1 150016873 5293215 2325437..2325820 1 NC_009617.1 PFAM: nitrogen regulatory protein P-II; KEGG: cac:CAC0255 nitrogen regulatory protein PII (nitrogen fixation nifHD); nitrogen regulatory protein P-II 2325820 5293215 Cbei_2001 Clostridium beijerinckii NCIMB 8052 nitrogen regulatory protein P-II YP_001309127.1 2325437 D 290402 CDS YP_001309128.1 150016874 5293216 2325839..2327425 1 NC_009617.1 TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase, component 1; KEGG: cac:CAC0256 nitrogenase molybdenum-iron protein, alpha chain (nitrogenase component I) gene nifD; nitrogenase molybdenum-iron protein subunit alpha 2327425 5293216 Cbei_2002 Clostridium beijerinckii NCIMB 8052 nitrogenase molybdenum-iron protein subunit alpha YP_001309128.1 2325839 D 290402 CDS YP_001309129.1 150016875 5293217 2327425..2328789 1 NC_009617.1 TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase, component 1; KEGG: cac:CAC0257 nitrogenase molibdenum-iron protein, beta chain, gene nifK; nitrogenase molybdenum-iron protein subunit beta 2328789 5293217 Cbei_2003 Clostridium beijerinckii NCIMB 8052 nitrogenase molybdenum-iron protein subunit beta YP_001309129.1 2327425 D 290402 CDS YP_001309130.1 150016876 5293218 2329971..2331335 1 NC_009617.1 TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase, component 1; KEGG: cac:CAC0258 nitrogenase iron-molibdenum cofactor biosinthesis protein, gene nifE; nitrogenase MoFe cofactor biosynthesis protein NifE 2331335 5293218 Cbei_2004 Clostridium beijerinckii NCIMB 8052 nitrogenase MoFe cofactor biosynthesis protein NifE YP_001309130.1 2329971 D 290402 CDS YP_001309131.1 150016877 5293219 2331322..2334012 1 NC_009617.1 KEGG: cac:CAC0259 fusion nifN/K+nifB (nifN-nitrogenase iron molybdenum cofactor biosinthesis protein, nifK-nitrogenase molibdenum-iron protein beta chain, nifB-nitrogenase iron-molibdenum cofactor biosynthesis protein); TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: oxidoreductase/nitrogenase, component 1; Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; nitrogenase cofactor biosynthesis protein NifB 2334012 5293219 Cbei_2005 Clostridium beijerinckii NCIMB 8052 nitrogenase cofactor biosynthesis protein NifB YP_001309131.1 2331322 D 290402 CDS YP_001309132.1 150016878 5293220 2334338..2334646 1 NC_009617.1 KEGG: mgm:Mmc1_0047 ferredoxin, 2Fe-2S; ferredoxin, 2Fe-2S 2334646 5293220 Cbei_2006 Clostridium beijerinckii NCIMB 8052 ferredoxin, 2Fe-2S YP_001309132.1 2334338 D 290402 CDS YP_001309133.1 150016879 5293221 2335016..2336185 1 NC_009617.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cac:CAC2796 MoaA/NirJ family Fe-S oxidoreductase; radical SAM domain-containing protein 2336185 5293221 Cbei_2007 Clostridium beijerinckii NCIMB 8052 radical SAM domain-containing protein YP_001309133.1 2335016 D 290402 CDS YP_001309134.1 150016880 5293222 2336229..2337218 1 NC_009617.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: chy:CHY_1211 radical SAM domain protein; radical SAM domain-containing protein 2337218 5293222 Cbei_2008 Clostridium beijerinckii NCIMB 8052 radical SAM domain-containing protein YP_001309134.1 2336229 D 290402 CDS YP_001309135.1 150016881 5293223 2337270..2337737 1 NC_009617.1 SMART: regulatory protein, AsnC/Lrp family; KEGG: mta:Moth_2198 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 2337737 5293223 Cbei_2009 Clostridium beijerinckii NCIMB 8052 AsnC family transcriptional regulator YP_001309135.1 2337270 D 290402 CDS YP_001309136.1 150016882 5293224 2337730..2338197 1 NC_009617.1 KEGG: cac:CAC2793 transcriptional regulator, Lrp family (possible nitrite reductase regulator NirD); AsnC family transcriptional regulator 2338197 5293224 Cbei_2010 Clostridium beijerinckii NCIMB 8052 AsnC family transcriptional regulator YP_001309136.1 2337730 D 290402 CDS YP_001309137.1 150016883 5293225 2338415..2339329 1 NC_009617.1 KEGG: cac:CAC0260 homocitrate synthase, omega subunit nifV (nivO); isopropylmalate/homocitrate/citramalate synthase-like protein 2339329 5293225 Cbei_2011 Clostridium beijerinckii NCIMB 8052 isopropylmalate/homocitrate/citramalate synthase-like protein YP_001309137.1 2338415 D 290402 CDS YP_001309138.1 150016884 5293226 2339351..2340133 1 NC_009617.1 PFAM: pyruvate carboxyltransferase; KEGG: cac:CAC0261 homocitrate synthase,alpha subunit nifV(nioA); homocitrate synthase 2340133 5293226 Cbei_2012 Clostridium beijerinckii NCIMB 8052 homocitrate synthase YP_001309138.1 2339351 D 290402 CDS YP_001309139.1 150016885 5293227 2340972..2341391 1 NC_009617.1 PFAM: DNA polymerase, beta domain protein region; KEGG: mja:MJ0126 hypothetical protein; DNA polymerase subunit beta 2341391 5293227 Cbei_2013 Clostridium beijerinckii NCIMB 8052 DNA polymerase subunit beta YP_001309139.1 2340972 D 290402 CDS YP_001309140.1 150016886 5293228 2341388..2341816 1 NC_009617.1 hypothetical protein 2341816 5293228 Cbei_2014 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309140.1 2341388 D 290402 CDS YP_001309141.1 150016887 5293229 2341829..2344759 1 NC_009617.1 PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; helicase c2; DEAD-like helicases-like; KEGG: dsy:DSY1872 hypothetical protein; exonuclease 2344759 5293229 Cbei_2015 Clostridium beijerinckii NCIMB 8052 exonuclease YP_001309141.1 2341829 D 290402 CDS YP_001309142.1 150016888 5293230 2345282..2345446 1 NC_009617.1 KEGG: cpr:CPR_2321 hypothetical protein; hypothetical protein 2345446 5293230 Cbei_2016 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309142.1 2345282 D 290402 CDS YP_001309143.1 150016889 5293231 complement(2345681..2346532) 1 NC_009617.1 PFAM: Patatin; KEGG: sha:SH2556 hypothetical protein; patatin 2346532 5293231 Cbei_2017 Clostridium beijerinckii NCIMB 8052 patatin YP_001309143.1 2345681 R 290402 CDS YP_001309144.1 150016890 5293232 2346637..2347029 1 NC_009617.1 PFAM: regulatory protein, MerR; KEGG: bha:BH3858 transcriptional regulator (MerR family); MerR family transcriptional regulator 2347029 5293232 Cbei_2018 Clostridium beijerinckii NCIMB 8052 MerR family transcriptional regulator YP_001309144.1 2346637 D 290402 CDS YP_001309145.1 150016891 5293233 complement(2347463..2347813) 1 NC_009617.1 KEGG: spd:SPD_1327 bacterocin transport accessory protein; bacterocin transport accessory protein 2347813 5293233 Cbei_2019 Clostridium beijerinckii NCIMB 8052 bacterocin transport accessory protein YP_001309145.1 2347463 R 290402 CDS YP_001309146.1 150016892 5293234 2348326..2348637 1 NC_009617.1 KEGG: tde:TDE2752 hypothetical protein; hypothetical protein 2348637 5293234 Cbei_2020 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309146.1 2348326 D 290402 CDS YP_001309147.1 150016893 5293235 2348986..2350956 1 NC_009617.1 KEGG: cno:NT01CX_2411 hypothetical protein; hypothetical protein 2350956 5293235 Cbei_2021 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309147.1 2348986 D 290402 CDS YP_001309148.1 150016894 5293236 2351380..2352090 1 NC_009617.1 PFAM: protein of unknown function DUF542, ScdA domain protein; Hemerythrin HHE cation binding domain protein; KEGG: cac:CAC0071 uncharacterized conserved protein, YtfE E.coli ortholog; hypothetical protein 2352090 5293236 Cbei_2022 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309148.1 2351380 D 290402 CDS YP_001309149.1 150016895 5293237 2352623..2352895 1 NC_009617.1 KEGG: dsy:DSY1202 hypothetical protein; hypothetical protein 2352895 5293237 Cbei_2023 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309149.1 2352623 D 290402 CDS YP_001309150.1 150016896 5293238 2353495..2354292 1 NC_009617.1 PFAM: DNA polymerase, beta domain protein region; KEGG: vfi:VF1334 oxalate/formate antiporter; DNA polymerase subunit beta 2354292 5293238 Cbei_2024 Clostridium beijerinckii NCIMB 8052 DNA polymerase subunit beta YP_001309150.1 2353495 D 290402 CDS YP_001309151.1 150016897 5296365 2355110..2355454 1 NC_009617.1 KEGG: cac:CAC3679 uncharacterized protein of kdp operon, KdpX; hypothetical protein 2355454 5296365 Cbei_2026 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309151.1 2355110 D 290402 CDS YP_001309152.1 150016898 5293240 2355662..2358247 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Osmosensitive K+ channel His kinase sensor; UspA domain protein; KEGG: cac:CAC3678 sensor protein KdpD (ATPase containing sensor domain and histidine kinase domain); osmosensitive K+ channel signal transduction histidine kinase 2358247 5293240 Cbei_2027 Clostridium beijerinckii NCIMB 8052 osmosensitive K+ channel signal transduction histidine kinase YP_001309152.1 2355662 D 290402 CDS YP_001309153.1 150016899 5293241 2358237..2358935 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cac:CAC3677 KDP operon transcriptional regulatory protein KdpE (CheY-like receiver domain and HTH-type DNA-binding domain); two component transcriptional regulator 2358935 5293241 Cbei_2028 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001309153.1 2358237 D 290402 CDS YP_001309154.1 150016900 5293242 2359063..2361066 1 NC_009617.1 PFAM: K+ potassium transporter; KEGG: cpf:CPF_1235 potassium transporter; K+ potassium transporter 2361066 5293242 Cbei_2029 Clostridium beijerinckii NCIMB 8052 K+ potassium transporter YP_001309154.1 2359063 D 290402 CDS YP_001309155.1 150016901 5293243 2361344..2361838 1 NC_009617.1 PFAM: transposase IS3/IS911 family protein; KEGG: pcr:Pcryo_2438 transposase IS3/IS911; transposase IS3/IS911 family protein 2361838 5293243 Cbei_2030 Clostridium beijerinckii NCIMB 8052 transposase IS3/IS911 family protein YP_001309155.1 2361344 D 290402 CDS YP_001309156.1 150016902 5293244 2362099..2362701 1 NC_009617.1 PFAM: Integrase, catalytic region; KEGG: bce:BC5180 transposase; integrase catalytic subunit 2362701 5293244 Cbei_2031 Clostridium beijerinckii NCIMB 8052 integrase catalytic subunit YP_001309156.1 2362099 D 290402 CDS YP_001309157.1 150016903 5296366 2363214..2363573 1 NC_009617.1 hypothetical protein 2363573 5296366 Cbei_2033 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309157.1 2363214 D 290402 CDS YP_001309158.1 150016904 5293246 2363994..2364779 1 NC_009617.1 catalyzes the formation of crotonoyl-CoA from (3R)-3-hydroxybutanoyl-CoA; 3-hydroxybutyryl-CoA dehydratase 2364779 5293246 Cbei_2034 Clostridium beijerinckii NCIMB 8052 3-hydroxybutyryl-CoA dehydratase YP_001309158.1 2363994 D 290402 CDS YP_001309159.1 150016905 5293247 2364854..2365993 1 NC_009617.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: cpr:CPR_2286 butyryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 2365993 5293247 Cbei_2035 Clostridium beijerinckii NCIMB 8052 acyl-CoA dehydrogenase domain-containing protein YP_001309159.1 2364854 D 290402 CDS YP_001309160.1 150016906 5293248 2366007..2366786 1 NC_009617.1 PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; KEGG: cpe:CPE2299 electron transfer flavoprotein beta subunit; electron transfer flavoprotein, alpha/beta-subunit-like protein 2366786 5293248 Cbei_2036 Clostridium beijerinckii NCIMB 8052 electron transfer flavoprotein, alpha/beta-subunit-like protein YP_001309160.1 2366007 D 290402 CDS YP_001309161.1 150016907 5293249 2366809..2367816 1 NC_009617.1 PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; Electron transfer flavoprotein, alpha subunit-like; KEGG: cpr:CPR_2284 3-hydroxybutyryl-CoA dehydrogenase; electron transfer flavoprotein, alpha/beta-subunit-like protein 2367816 5293249 Cbei_2037 Clostridium beijerinckii NCIMB 8052 electron transfer flavoprotein, alpha/beta-subunit-like protein YP_001309161.1 2366809 D 290402 CDS YP_001309162.1 150016908 5293250 2367889..2368314 1 NC_009617.1 PFAM: MaoC domain protein dehydratase; KEGG: ctc:CTC00706 (de)hydratase mit MaoC domain; dehydratase 2368314 5293250 Cbei_2038 Clostridium beijerinckii NCIMB 8052 dehydratase YP_001309162.1 2367889 D 290402 CDS YP_001309163.1 150016909 5293251 2368633..2370339 1 NC_009617.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; PAS fold domain protein; SMART: PAS domain containing protein; ATPase AAA; KEGG: ctc:CTC00707 transcriptional regulatory protein; sigma-54 dependent trancsriptional regulator 2370339 5293251 Cbei_2039 Clostridium beijerinckii NCIMB 8052 sigma-54 dependent trancsriptional regulator YP_001309163.1 2368633 D 290402 CDS YP_001309164.1 150016910 5293252 2370773..2372329 1 NC_009617.1 PFAM: coenzyme A transferase; KEGG: ctc:CTC00708 acetyl-coA:acetoacetyl-coA transferase alpha subunit; coenzyme A transferase 2372329 5293252 Cbei_2040 Clostridium beijerinckii NCIMB 8052 coenzyme A transferase YP_001309164.1 2370773 D 290402 CDS YP_001309165.1 150016911 5293253 2372518..2373912 1 NC_009617.1 PFAM: Gluconate transporter; Citrate transporter; KEGG: ctc:CTC00709 integral membrane permease; citrate transporter 2373912 5293253 Cbei_2041 Clostridium beijerinckii NCIMB 8052 citrate transporter YP_001309165.1 2372518 D 290402 CDS YP_001309166.1 150016912 5293254 2374977..2375852 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; transcription activator, effector binding; KEGG: bsu:BG12132 similar to transcriptional regulator (AraC/XylS family); transcription activator, effector binding 2375852 5293254 Cbei_2042 Clostridium beijerinckii NCIMB 8052 transcription activator, effector binding YP_001309166.1 2374977 D 290402 CDS YP_001309167.1 150016913 5293255 2376998..2377777 1 NC_009617.1 KEGG: swo:Swol_0978 hypothetical protein; hypothetical protein 2377777 5293255 Cbei_2043 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309167.1 2376998 D 290402 CDS YP_001309168.1 150016914 5293256 2377887..2378078 1 NC_009617.1 KEGG: pin:Ping_1432 hypothetical protein; hypothetical protein 2378078 5293256 Cbei_2044 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309168.1 2377887 D 290402 CDS YP_001309169.1 150016915 5293257 2378460..2380886 1 NC_009617.1 SMART: ATPase AAA; KEGG: hne:HNE_0284 hypothetical protein; ATPase AAA 2380886 5293257 Cbei_2045 Clostridium beijerinckii NCIMB 8052 ATPase AAA YP_001309169.1 2378460 D 290402 CDS YP_001309170.1 150016916 5293258 complement(2381227..2382684) 1 NC_009617.1 KEGG: tte:TTE2242 transposase; transposase 2382684 5293258 Cbei_2046 Clostridium beijerinckii NCIMB 8052 transposase YP_001309170.1 2381227 R 290402 CDS YP_001309171.1 150016917 5293259 2382993..2383670 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: oih:OB0357 two-component response regulator; two component transcriptional regulator 2383670 5293259 Cbei_2047 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001309171.1 2382993 D 290402 CDS YP_001309172.1 150016918 5293260 2383672..2384673 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: oih:OB0358 two-component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 2384673 5293260 Cbei_2048 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001309172.1 2383672 D 290402 CDS YP_001309173.1 150016919 5293261 2384782..2385492 1 NC_009617.1 PFAM: SMC domain protein; ABC transporter; SMART: ATPase AAA; KEGG: oih:OB0359 ABC transporter ATP-binding protein; ABC transporter 2385492 5293261 Cbei_2049 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001309173.1 2384782 D 290402 CDS YP_001309174.1 150016920 5293262 2385489..2388098 1 NC_009617.1 PFAM: protein of unknown function DUF214; KEGG: oih:OB0360 hypothetical conserved protein; hypothetical protein 2388098 5293262 Cbei_2050 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309174.1 2385489 D 290402 CDS YP_001309175.1 150016921 5293263 2388709..2388954 1 NC_009617.1 KEGG: gka:GK1812 hypothetical protein; hypothetical protein 2388954 5293263 Cbei_2051 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309175.1 2388709 D 290402 CDS YP_001309176.1 150016922 5293264 2388954..2389361 1 NC_009617.1 KEGG: gka:GK1811 hypothetical protein; hypothetical protein 2389361 5293264 Cbei_2052 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309176.1 2388954 D 290402 CDS YP_001309177.1 150016923 5293265 complement(2389530..2390468) 1 NC_009617.1 PFAM: ApbE family lipoprotein; KEGG: smu:SMU.1088 thiamine biosynthesis lipoprotein; ApbE family lipoprotein 2390468 5293265 Cbei_2053 Clostridium beijerinckii NCIMB 8052 ApbE family lipoprotein YP_001309177.1 2389530 R 290402 CDS YP_001309178.1 150016924 5293266 complement(2390461..2391408) 1 NC_009617.1 PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: lpl:lp_1422 transcription regulator; LysR family transcriptional regulator 2391408 5293266 Cbei_2054 Clostridium beijerinckii NCIMB 8052 LysR family transcriptional regulator YP_001309178.1 2390461 R 290402 CDS YP_001309179.1 150016925 5293267 2391661..2392260 1 NC_009617.1 PFAM: NADPH-dependent FMN reductase; KEGG: lpl:lp_1424 oxidoreductase (); NADPH-dependent FMN reductase 2392260 5293267 Cbei_2055 Clostridium beijerinckii NCIMB 8052 NADPH-dependent FMN reductase YP_001309179.1 2391661 D 290402 CDS YP_001309180.1 150016926 5293268 2392275..2394698 1 NC_009617.1 TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; NADPH-dependent FMN reductase; FAD dependent oxidoreductase; FMN-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: smu:SMU.180 oxidoreductase; possible fumarate reductase; flavocytochrome c 2394698 5293268 Cbei_2056 Clostridium beijerinckii NCIMB 8052 flavocytochrome c YP_001309180.1 2392275 D 290402 CDS YP_001309181.1 150016927 5293269 2395103..2395471 1 NC_009617.1 PFAM: protein of unknown function DUF1304; KEGG: btl:BALH_2866 hypothetical protein; hypothetical protein 2395471 5293269 Cbei_2057 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309181.1 2395103 D 290402 CDS YP_001309182.1 150016928 5293270 2395545..2396204 1 NC_009617.1 PFAM: DSBA oxidoreductase; KEGG: cac:CAC3447 protein-disulfide isomerase DsbC/DsbG; DSBA oxidoreductase 2396204 5293270 Cbei_2058 Clostridium beijerinckii NCIMB 8052 DSBA oxidoreductase YP_001309182.1 2395545 D 290402 CDS YP_001309183.1 150016929 5293271 2396471..2397790 1 NC_009617.1 PFAM: SEC-C motif domain protein; KEGG: dsy:DSY0707 hypothetical protein; SecC motif-containing protein 2397790 5293271 Cbei_2059 Clostridium beijerinckii NCIMB 8052 SecC motif-containing protein YP_001309183.1 2396471 D 290402 CDS YP_001309184.1 150016930 5293272 2397962..2398570 1 NC_009617.1 hypothetical protein 2398570 5293272 Cbei_2060 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309184.1 2397962 D 290402 CDS YP_001309185.1 150016931 5293273 2399301..2400545 1 NC_009617.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: llm:llmg_0910 ammonium transporter AmtB; ammonium transporter 2400545 5293273 Cbei_2061 Clostridium beijerinckii NCIMB 8052 ammonium transporter YP_001309185.1 2399301 D 290402 CDS YP_001309186.1 150016932 5293274 2401047..2401442 1 NC_009617.1 hypothetical protein 2401442 5293274 Cbei_2062 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309186.1 2401047 D 290402 CDS YP_001309187.1 150016933 5293275 complement(2401624..2404248) 1 NC_009617.1 PFAM: pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising protein, mobile region; KEGG: cac:CAC0534 phosphoenolpyruvate synthase (gene pps); phosphoenolpyruvate synthase 2404248 5293275 Cbei_2063 Clostridium beijerinckii NCIMB 8052 phosphoenolpyruvate synthase YP_001309187.1 2401624 R 290402 CDS YP_001309188.1 150016934 5293276 complement(2404307..2404954) 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: cth:Cthe_3140 transcriptional regulator, TetR family; TetR family transcriptional regulator 2404954 5293276 Cbei_2064 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001309188.1 2404307 R 290402 CDS YP_001309189.1 150016935 5293277 2405203..2405817 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: dsy:DSY4218 hypothetical protein; TetR family transcriptional regulator 2405817 5293277 Cbei_2065 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001309189.1 2405203 D 290402 CDS YP_001309190.1 150016936 5293278 2405840..2408494 1 NC_009617.1 PFAM: pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising protein, mobile region; KEGG: dsy:DSY4219 phosphoenolpyruvate synthase; phosphoenolpyruvate synthase 2408494 5293278 Cbei_2066 Clostridium beijerinckii NCIMB 8052 phosphoenolpyruvate synthase YP_001309190.1 2405840 D 290402 CDS YP_001309191.1 150016937 5293279 complement(2408734..2410107) 1 NC_009617.1 PFAM: amidohydrolase; KEGG: hch:HCH_01106 cytosine deaminase and related metal-dependent hydrolase; amidohydrolase 2410107 5293279 Cbei_2067 Clostridium beijerinckii NCIMB 8052 amidohydrolase YP_001309191.1 2408734 R 290402 CDS YP_001309192.1 150016938 5293280 2410725..2411114 1 NC_009617.1 KEGG: tde:TDE2752 hypothetical protein; glutaredoxin-like protein 2411114 5293280 Cbei_2068 Clostridium beijerinckii NCIMB 8052 glutaredoxin-like protein YP_001309192.1 2410725 D 290402 CDS YP_001309193.1 150016939 5293281 complement(2411617..2412183) 1 NC_009617.1 PFAM: manganese containing catalase; KEGG: cpr:CPR_0934 spore coat peptide assembly protein CotJC; manganese containing catalase 2412183 5293281 Cbei_2069 Clostridium beijerinckii NCIMB 8052 manganese containing catalase YP_001309193.1 2411617 R 290402 CDS YP_001309194.1 150016940 5293282 complement(2412190..2412453) 1 NC_009617.1 KEGG: cpr:CPR_0933 spore coat peptide assembly protein CotJB; spore coat peptide assembly protein CotJB 2412453 5293282 Cbei_2070 Clostridium beijerinckii NCIMB 8052 spore coat peptide assembly protein CotJB YP_001309194.1 2412190 R 290402 CDS YP_001309195.1 150016941 5293283 complement(2412463..2412777) 1 NC_009617.1 KEGG: cpf:CPF_1066 hypothetical protein; hypothetical protein 2412777 5293283 Cbei_2071 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309195.1 2412463 R 290402 CDS YP_001309196.1 150016942 5293284 complement(2412959..2413822) 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 3; KEGG: bja:blr2224 ABC transporter amino acid-binding protein; extracellular solute-binding protein 2413822 5293284 Cbei_2072 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001309196.1 2412959 R 290402 CDS YP_001309197.1 150016943 5293285 2414204..2415538 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cac:CAC3319 signal transduction histidine kinase; histidine kinase 2415538 5293285 Cbei_2073 Clostridium beijerinckii NCIMB 8052 histidine kinase YP_001309197.1 2414204 D 290402 CDS YP_001309198.1 150016944 5293286 complement(2416228..2416764) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC1557 predicted acetyltransferase; N-acetyltransferase GCN5 2416764 5293286 Cbei_2074 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001309198.1 2416228 R 290402 CDS YP_001309199.1 150016945 5293287 2417507..2418400 1 NC_009617.1 PFAM: NUDIX hydrolase; KEGG: cth:Cthe_3126 NUDIX hydrolase; NUDIX hydrolase 2418400 5293287 Cbei_2075 Clostridium beijerinckii NCIMB 8052 NUDIX hydrolase YP_001309199.1 2417507 D 290402 CDS YP_001309200.1 150016946 5293288 2418470..2419270 1 NC_009617.1 KEGG: shw:Sputw3181_1681 ribose-phosphate pyrophosphokinase; ribose-phosphate pyrophosphokinase 2419270 5293288 Cbei_2076 Clostridium beijerinckii NCIMB 8052 ribose-phosphate pyrophosphokinase YP_001309200.1 2418470 D 290402 CDS YP_001309201.1 150016947 5293289 2419768..2420307 1 NC_009617.1 KEGG: lla:L67226 amidase; amidase 2420307 5293289 Cbei_2077 Clostridium beijerinckii NCIMB 8052 amidase YP_001309201.1 2419768 D 290402 CDS YP_001309202.1 150016948 5293290 2420319..2421788 1 NC_009617.1 PFAM: Nicotinate phosphoribosyltransferase and related; KEGG: son:SO1981 hypothetical protein; nicotinate phosphoribosyltransferase 2421788 5293290 Cbei_2078 Clostridium beijerinckii NCIMB 8052 nicotinate phosphoribosyltransferase YP_001309202.1 2420319 D 290402 CDS YP_001309203.1 150016949 5296367 2422056..2423096 1 NC_009617.1 hypothetical protein 2423096 5296367 Cbei_2080 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309203.1 2422056 D 290402 CDS YP_001309204.1 150016950 5293292 2423239..2424162 1 NC_009617.1 KEGG: rha:RHA1_ro08617 hypothetical protein; hypothetical protein 2424162 5293292 Cbei_2081 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309204.1 2423239 D 290402 CDS YP_001309205.1 150016951 5293293 2424269..2425531 1 NC_009617.1 PFAM: adenylosuccinate synthetase; KEGG: rha:RHA1_ro08616 adenylosuccinate synthetase; adenylosuccinate synthase 2425531 5293293 Cbei_2082 Clostridium beijerinckii NCIMB 8052 adenylosuccinate synthase YP_001309205.1 2424269 D 290402 CDS YP_001309206.1 150016952 5293294 2426183..2427658 1 NC_009617.1 PFAM: GntR family transcriptional regulator; aminotransferase, class I and II; KEGG: bca:BCE_2708 transcriptional regulator, GntR family; GntR family transcriptional regulator 2427658 5293294 Cbei_2083 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001309206.1 2426183 D 290402 CDS YP_001309207.1 150016953 5293295 2427766..2428383 1 NC_009617.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: cac:CAC2593 uncharacterized conserved membrane protein, YGGA family; lysine exporter protein LysE/YggA 2428383 5293295 Cbei_2084 Clostridium beijerinckii NCIMB 8052 lysine exporter protein LysE/YggA YP_001309207.1 2427766 D 290402 CDS YP_001309208.1 150016954 5293296 2429141..2430097 1 NC_009617.1 PFAM: dihydrouridine synthase, DuS; KEGG: cac:CAC3454 predicted TIM-barrel enzyme, NifR3 family; dihydrouridine synthase 2430097 5293296 Cbei_2085 Clostridium beijerinckii NCIMB 8052 dihydrouridine synthase YP_001309208.1 2429141 D 290402 CDS YP_001309209.1 150016955 5293297 2430700..2431896 1 NC_009617.1 enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity; trans-2-enoyl-CoA reductase 2431896 5293297 Cbei_2086 Clostridium beijerinckii NCIMB 8052 trans-2-enoyl-CoA reductase YP_001309209.1 2430700 D 290402 CDS YP_001309210.1 150016956 5293298 2432104..2434038 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cno:NT01CX_0224 sensory transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2434038 5293298 Cbei_2087 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001309210.1 2432104 D 290402 CDS YP_001309211.1 150016957 5293299 2434280..2434948 1 NC_009617.1 PFAM: TENA/THI-4 domain protein; KEGG: bce:BC0742 transcriptional activator tenA; TenA family transcription regulator 2434948 5293299 Cbei_2088 Clostridium beijerinckii NCIMB 8052 TenA family transcription regulator YP_001309211.1 2434280 D 290402 CDS YP_001309212.1 150016958 5293300 2434949..2435716 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH2680 ABC transporter (ATP-binding protein); ABC transporter 2435716 5293300 Cbei_2089 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001309212.1 2434949 D 290402 CDS YP_001309213.1 150016959 5293301 2435713..2436495 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CAC1399 ABC transporter permease component; binding-protein-dependent transport system inner membrane protein 2436495 5293301 Cbei_2090 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001309213.1 2435713 D 290402 CDS YP_001309214.1 150016960 5293302 2436476..2437480 1 NC_009617.1 PFAM: NMT1/THI5 like; KEGG: bce:BC0745 hydroxymethylpyrimidine-binding protein; NMT1/THI5-like protein 2437480 5293302 Cbei_2091 Clostridium beijerinckii NCIMB 8052 NMT1/THI5-like protein YP_001309214.1 2436476 D 290402 CDS YP_001309215.1 150016961 5293303 2438193..2438636 1 NC_009617.1 PFAM: regulatory protein, MarR; transcriptional regulator TrmB; KEGG: tte:TTE2515 transcriptional regulator; transcriptional regulator TrmB 2438636 5293303 Cbei_2092 Clostridium beijerinckii NCIMB 8052 transcriptional regulator TrmB YP_001309215.1 2438193 D 290402 CDS YP_001309216.1 150016962 5293304 2438650..2440425 1 NC_009617.1 PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC3282 ABC-type multidrug/protein/lipid transport system, ATPase component; multidrug ABC transporter ATPase 2440425 5293304 Cbei_2093 Clostridium beijerinckii NCIMB 8052 multidrug ABC transporter ATPase YP_001309216.1 2438650 D 290402 CDS YP_001309217.1 150016963 5293305 2440422..2442350 1 NC_009617.1 PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: cno:NT01CX_1825 ABC-type multidrug/protein/lipid transport system, ATPase; multidrug ABC transporter 2442350 5293305 Cbei_2094 Clostridium beijerinckii NCIMB 8052 multidrug ABC transporter YP_001309217.1 2440422 D 290402 CDS YP_001309218.1 150016964 5293306 2442825..2443067 1 NC_009617.1 KEGG: pin:Ping_1634 acyl carrier protein; acyl carrier protein 2443067 5293306 Cbei_2095 Clostridium beijerinckii NCIMB 8052 acyl carrier protein YP_001309218.1 2442825 D 290402 CDS YP_001309219.1 150016965 5293307 2443064..2444542 1 NC_009617.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mhu:Mhun_3158 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 2444542 5293307 Cbei_2096 Clostridium beijerinckii NCIMB 8052 AMP-dependent synthetase and ligase YP_001309219.1 2443064 D 290402 CDS YP_001309220.1 150016966 5293308 2444539..2445636 1 NC_009617.1 PFAM: acyl-protein synthetase, LuxE; KEGG: mhu:Mhun_3112 acyl-protein synthetase, LuxE; acyl-protein synthetase LuxE 2445636 5293308 Cbei_2097 Clostridium beijerinckii NCIMB 8052 acyl-protein synthetase LuxE YP_001309220.1 2444539 D 290402 CDS YP_001309221.1 150016967 5293309 2445633..2446928 1 NC_009617.1 PFAM: acyl-CoA reductase; KEGG: mhu:Mhun_3113 acyl protein synthase/acyl-CoA reductase RfbN; acyl-CoA reductase 2446928 5293309 Cbei_2098 Clostridium beijerinckii NCIMB 8052 acyl-CoA reductase YP_001309221.1 2445633 D 290402 CDS YP_001309222.1 150016968 5293310 2447041..2448813 1 NC_009617.1 TIGRFAM: PAS sensor protein; PFAM: CBS domain containing protein; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: ATPase AAA; KEGG: swo:Swol_1487 sigma-L-dependent transcriptional regulator; sigma-54 dependent trancsriptional regulator 2448813 5293310 Cbei_2099 Clostridium beijerinckii NCIMB 8052 sigma-54 dependent trancsriptional regulator YP_001309222.1 2447041 D 290402 CDS YP_001309223.1 150016969 5293311 2449273..2450727 1 NC_009617.1 PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: pgi:PG0692 gamma-aminobutyrate metabolism dehydratase/isomerase; vinylacetyl-CoA Delta-isomerase 2450727 5293311 Cbei_2100 Clostridium beijerinckii NCIMB 8052 vinylacetyl-CoA Delta-isomerase YP_001309223.1 2449273 D 290402 CDS YP_001309224.1 150016970 5293312 2450729..2451010 1 NC_009617.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: ecn:Ecaj_0800 nitrogen-fixing NifU, C-terminal; NifU domain-containing protein 2451010 5293312 Cbei_2101 Clostridium beijerinckii NCIMB 8052 NifU domain-containing protein YP_001309224.1 2450729 D 290402 CDS YP_001309225.1 150016971 5293313 2451026..2451289 1 NC_009617.1 hypothetical protein 2451289 5293313 Cbei_2102 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309225.1 2451026 D 290402 CDS YP_001309226.1 150016972 5293314 2451308..2452618 1 NC_009617.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: ctc:CTC00482 4-hydroxybutyrate coenzyme A transferase; acetyl-CoA hydrolase/transferase 2452618 5293314 Cbei_2103 Clostridium beijerinckii NCIMB 8052 acetyl-CoA hydrolase/transferase YP_001309226.1 2451308 D 290402 CDS YP_001309227.1 150016973 5293315 2452654..2453457 1 NC_009617.1 PFAM: beta-lactamase domain protein; KEGG: ssp:SSP0236 similar to quorum-quenching N-acyl homoserine lactonase; beta-lactamase domain-containing protein 2453457 5293315 Cbei_2104 Clostridium beijerinckii NCIMB 8052 beta-lactamase domain-containing protein YP_001309227.1 2452654 D 290402 CDS YP_001309228.1 150016974 5293316 2453926..2454402 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pat:Patl_1595 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2454402 5293316 Cbei_2105 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001309228.1 2453926 D 290402 CDS YP_001309229.1 150016975 5293317 2454840..2455640 1 NC_009617.1 catalyzes the formation of L-histidinol from L-histidinol phosphate; histidinol-phosphatase 2455640 5293317 Cbei_2106 Clostridium beijerinckii NCIMB 8052 histidinol-phosphatase YP_001309229.1 2454840 D 290402 CDS YP_001309230.1 150016976 5293318 2455683..2456288 1 NC_009617.1 PFAM: protein of unknown function DUF218; KEGG: cpf:CPF_1089 hypothetical protein; hypothetical protein 2456288 5293318 Cbei_2107 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309230.1 2455683 D 290402 CDS YP_001309231.1 150016977 5293319 2456705..2457028 1 NC_009617.1 PFAM: ArsR family transcriptional regulator; KEGG: lin:pli0036 similar to arsenical resistance operon repressor; ArsR family transcriptional regulator 2457028 5293319 Cbei_2108 Clostridium beijerinckii NCIMB 8052 ArsR family transcriptional regulator YP_001309231.1 2456705 D 290402 CDS YP_001309232.1 150016978 5293320 2457103..2457489 1 NC_009617.1 PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: dsy:DSY4151 hypothetical protein; arsenical resistance operon trans-acting repressor ArsD 2457489 5293320 Cbei_2109 Clostridium beijerinckii NCIMB 8052 arsenical resistance operon trans-acting repressor ArsD YP_001309232.1 2457103 D 290402 CDS YP_001309233.1 150016979 5293321 2457545..2459293 1 NC_009617.1 KEGG: dsy:DSY4598 hypothetical protein; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; SMART: ATPase AAA; arsenite-activated ATPase ArsA 2459293 5293321 Cbei_2110 Clostridium beijerinckii NCIMB 8052 arsenite-activated ATPase ArsA YP_001309233.1 2457545 D 290402 CDS YP_001309234.1 150016980 5293322 2459319..2459732 1 NC_009617.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: cac:CA_P0105 arsenate reductase, ArsC, protein-tyrosine-phosphatase family enzyme; protein tyrosine phosphatase 2459732 5293322 Cbei_2111 Clostridium beijerinckii NCIMB 8052 protein tyrosine phosphatase YP_001309234.1 2459319 D 290402 CDS YP_001309235.1 150016981 5293323 2459761..2460810 1 NC_009617.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: cac:CA_P0104 heavy metal resistance membrane protein; arsenical-resistance protein 2460810 5293323 Cbei_2112 Clostridium beijerinckii NCIMB 8052 arsenical-resistance protein YP_001309235.1 2459761 D 290402 CDS YP_001309236.1 150016982 5293324 2461021..2461281 1 NC_009617.1 PFAM: Domain of unknown function DUF1883; KEGG: maq:Maqu_1263 TIR protein; hypothetical protein 2461281 5293324 Cbei_2113 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309236.1 2461021 D 290402 CDS YP_001309237.1 150016983 5293325 2461773..2463281 1 NC_009617.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5-monophosphate dehydrogenase 2463281 5293325 Cbei_2114 Clostridium beijerinckii NCIMB 8052 inosine 5-monophosphate dehydrogenase YP_001309237.1 2461773 D 290402 CDS YP_001309238.1 150016984 5293326 2463906..2465792 1 NC_009617.1 PFAM: DNA mismatch repair protein MutS domain protein; SMART: MutS III domain protein; KEGG: cac:CA_P0099 DNA mismatch repair protein, MutS fragment; DNA mismatch repair protein MutS domain-containing protein 2465792 5293326 Cbei_2115 Clostridium beijerinckii NCIMB 8052 DNA mismatch repair protein MutS domain-containing protein YP_001309238.1 2463906 D 290402 CDS YP_001309239.1 150016985 5293327 2466533..2467786 1 NC_009617.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cno:NT01CX_0501 fusion HD-GYP domain and HD-hydrolase domain; metal dependent phosphohydrolase 2467786 5293327 Cbei_2116 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001309239.1 2466533 D 290402 CDS YP_001309240.1 150016986 5293328 2468425..2469129 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cpr:CPR_0448 DNA-binding response regulator; two component transcriptional regulator 2469129 5293328 Cbei_2117 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001309240.1 2468425 D 290402 CDS YP_001309241.1 150016987 5293329 2469116..2471290 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cpe:CPE0458 two-component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 2471290 5293329 Cbei_2118 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001309241.1 2469116 D 290402 CDS YP_001309242.1 150016988 5293330 2471393..2471572 1 NC_009617.1 hypothetical protein 2471572 5293330 Cbei_2119 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309242.1 2471393 D 290402 CDS YP_001309243.1 150016989 5293331 2471753..2472094 1 NC_009617.1 KEGG: cpr:CPR_1393 hypothetical protein; hypothetical protein 2472094 5293331 Cbei_2120 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309243.1 2471753 D 290402 CDS YP_001309244.1 150016990 5293332 2472213..2473268 1 NC_009617.1 PFAM: alpha/beta hydrolase fold; KEGG: cac:CAC2246 lysophospholipase L2 PLDB, hydrolase of alpha/beta superfamily; alpha/beta fold family hydrolase 2473268 5293332 Cbei_2121 Clostridium beijerinckii NCIMB 8052 alpha/beta fold family hydrolase YP_001309244.1 2472213 D 290402 CDS YP_001309245.1 150016991 5293333 complement(2473332..2474741) 1 NC_009617.1 TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor, type I/II extracellular region; major facilitator superfamily MFS_1; KEGG: cac:CAC0751 proton-dependent oligopeptide transporter; amino acid/peptide transporter 2474741 5293333 Cbei_2122 Clostridium beijerinckii NCIMB 8052 amino acid/peptide transporter YP_001309245.1 2473332 R 290402 CDS YP_001309246.1 150016992 5293334 2475110..2476015 1 NC_009617.1 KEGG: lip:LI0105 hypothetical protein; hypothetical protein 2476015 5293334 Cbei_2123 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309246.1 2475110 D 290402 CDS YP_001309247.1 150016993 5293335 2476049..2477161 1 NC_009617.1 KEGG: cth:Cthe_2170 hypothetical protein; hypothetical protein 2477161 5293335 Cbei_2124 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309247.1 2476049 D 290402 CDS YP_001309248.1 150016994 5293336 2477320..2477874 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bat:BAS0323 hypothetical protein; N-acetyltransferase GCN5 2477874 5293336 Cbei_2125 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001309248.1 2477320 D 290402 CDS YP_001309249.1 150016995 5293337 2478461..2479750 1 NC_009617.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 2479750 aspC 5293337 aspC Clostridium beijerinckii NCIMB 8052 aspartyl-tRNA synthetase YP_001309249.1 2478461 D 290402 CDS YP_001309250.1 150016996 5293338 2479958..2480242 1 NC_009617.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase, C subunit; KEGG: cac:CAC2978 Glu-tRNA amidotransferase, subunit C; glutamyl-tRNA(Gln) amidotransferase subunit C 2480242 5293338 Cbei_2127 Clostridium beijerinckii NCIMB 8052 glutamyl-tRNA(Gln) amidotransferase subunit C YP_001309250.1 2479958 D 290402 CDS YP_001309251.1 150016997 5293339 2480258..2481697 1 NC_009617.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 2481697 gatA 5293339 gatA Clostridium beijerinckii NCIMB 8052 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_001309251.1 2480258 D 290402 CDS YP_001309252.1 150016998 5293340 2481711..2483150 1 NC_009617.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 2483150 gatB 5293340 gatB Clostridium beijerinckii NCIMB 8052 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_001309252.1 2481711 D 290402 CDS YP_001309253.1 150016999 5293341 2483344..2485215 1 NC_009617.1 KEGG: pfa:PF07_0038 Cg7 protein; hypothetical protein 2485215 5293341 Cbei_2130 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309253.1 2483344 D 290402 CDS YP_001309254.1 150017000 5293342 2485619..2486284 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: cpf:CPF_0605 cell wall binding repeat protein/mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain; cell wall binding repeat-containing protein 2486284 5293342 Cbei_2131 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001309254.1 2485619 D 290402 CDS YP_001309255.1 150017001 5293343 2487770..2488405 1 NC_009617.1 PFAM: Ankyrin; KEGG: spu:577492 similar to ankyrin 2,3/unc44; ankyrin 2488405 5293343 Cbei_2132 Clostridium beijerinckii NCIMB 8052 ankyrin YP_001309255.1 2487770 D 290402 CDS YP_001309256.1 150017002 5293344 2488552..2488707 1 NC_009617.1 hypothetical protein 2488707 5293344 Cbei_2133 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309256.1 2488552 D 290402 CDS YP_001309257.1 150017003 5293345 complement(2488814..2490343) 1 NC_009617.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bce:BC0376 alkyl hydroperoxide reductase subunit F; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2490343 5293345 Cbei_2134 Clostridium beijerinckii NCIMB 8052 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001309257.1 2488814 R 290402 CDS YP_001309258.1 150017004 5293346 complement(2490355..2490918) 1 NC_009617.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cth:Cthe_1965 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; peroxiredoxin 2490918 5293346 Cbei_2135 Clostridium beijerinckii NCIMB 8052 peroxiredoxin YP_001309258.1 2490355 R 290402 CDS YP_001309259.1 150017005 5293347 complement(2491078..2492079) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: ana:all2613 transcriptional regulator; helix-turn-helix domain-containing protein 2492079 5293347 Cbei_2136 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001309259.1 2491078 R 290402 CDS YP_001309260.1 150017006 5293348 2492294..2493913 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: cpe:CPE0570 hypothetical protein; cell wall binding repeat-containing protein 2493913 5293348 Cbei_2137 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001309260.1 2492294 D 290402 CDS YP_001309261.1 150017007 5293349 2494282..2495232 1 NC_009617.1 PFAM: periplasmic binding protein; KEGG: cpe:CPE0810 probable iron(III) dicitrate ABC transporter; periplasmic binding protein 2495232 5293349 Cbei_2138 Clostridium beijerinckii NCIMB 8052 periplasmic binding protein YP_001309261.1 2494282 D 290402 CDS YP_001309262.1 150017008 5293350 2495219..2496211 1 NC_009617.1 PFAM: transport system permease; KEGG: cpr:CPR_0795 iron compound ABC transporter permease; transport system permease 2496211 5293350 Cbei_2139 Clostridium beijerinckii NCIMB 8052 transport system permease YP_001309262.1 2495219 D 290402 CDS YP_001309263.1 150017009 5293351 2496213..2497220 1 NC_009617.1 PFAM: transport system permease; KEGG: cpe:CPE0812 probable ferrichrome ABC transporter; transport system permease 2497220 5293351 Cbei_2140 Clostridium beijerinckii NCIMB 8052 transport system permease YP_001309263.1 2496213 D 290402 CDS YP_001309264.1 150017010 5293352 2497221..2498009 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_0810 ferrichrome ABC transporter ATP-binding protein; ABC transporter 2498009 5293352 Cbei_2141 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001309264.1 2497221 D 290402 CDS YP_001309265.1 150017011 5293353 2498011..2499231 1 NC_009617.1 PFAM: major facilitator superfamily MFS_1; KEGG: btk:BT9727_2273 permease; possible macrolide-efflux protein; major facilitator superfamily transporter 2499231 5293353 Cbei_2142 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001309265.1 2498011 D 290402 CDS YP_001309266.1 150017012 5293354 complement(2499555..2500421) 1 NC_009617.1 PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: cac:CAC2394 transcriptional regulator, LysR family; LysR family transcriptional regulator 2500421 5293354 Cbei_2143 Clostridium beijerinckii NCIMB 8052 LysR family transcriptional regulator YP_001309266.1 2499555 R 290402 CDS YP_001309267.1 150017013 5293355 2500562..2502295 1 NC_009617.1 PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC2393 uncharacterized ABC transporter ATPase component; ABC transporter 2502295 5293355 Cbei_2144 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001309267.1 2500562 D 290402 CDS YP_001309268.1 150017014 5293356 2502296..2504035 1 NC_009617.1 PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC2392 uncharacterized ABC transporter ATPase component; ABC transporter 2504035 5293356 Cbei_2145 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001309268.1 2502296 D 290402 CDS YP_001309269.1 150017015 5293357 2504179..2505099 1 NC_009617.1 PFAM: polysaccharide deacetylase; KEGG: cpf:CPF_0823 polysaccharide deacetylase family protein; polysaccharide deacetylase 2505099 5293357 Cbei_2146 Clostridium beijerinckii NCIMB 8052 polysaccharide deacetylase YP_001309269.1 2504179 D 290402 CDS YP_001309270.1 150017016 5293358 2505529..2507598 1 NC_009617.1 TIGRFAM: PAS sensor protein; PFAM: phosphocarrier HPr protein; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; ATPase AAA; KEGG: cpr:CPR_2353 phosphocarrier HPr/sensory box protein/sigma-54 dependent transcriptional regulator; sigma-54 dependent trancsriptional regulator 2507598 5293358 Cbei_2147 Clostridium beijerinckii NCIMB 8052 sigma-54 dependent trancsriptional regulator YP_001309270.1 2505529 D 290402 CDS YP_001309271.1 150017017 5293359 2508091..2509089 1 NC_009617.1 with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK 2509089 5293359 Cbei_2148 Clostridium beijerinckii NCIMB 8052 dihydroxyacetone kinase subunit DhaK YP_001309271.1 2508091 D 290402 CDS YP_001309272.1 150017018 5293360 2509242..2509871 1 NC_009617.1 TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: cno:NT01CX_0688 dihydroxyacetone kinase, L subunit; dihydroxyacetone kinase subunit L 2509871 5293360 Cbei_2149 Clostridium beijerinckii NCIMB 8052 dihydroxyacetone kinase subunit L YP_001309272.1 2509242 D 290402 CDS YP_001309273.1 150017019 5293361 2509921..2510310 1 NC_009617.1 TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; PFAM: PTS system fructose subfamily IIA component; KEGG: cno:NT01CX_0687 dihydroxyacetone kinase, phosphotransfer subunit; PTS system mannnose-specific transporter subunit IIA 2510310 5293361 Cbei_2150 Clostridium beijerinckii NCIMB 8052 PTS system mannnose-specific transporter subunit IIA YP_001309273.1 2509921 D 290402 CDS YP_001309274.1 150017020 5293362 2510838..2511542 1 NC_009617.1 KEGG: oih:OB0245 hypothetical protein; hypothetical protein 2511542 5293362 Cbei_2151 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309274.1 2510838 D 290402 CDS YP_001309275.1 150017021 5293363 2512744..2513823 1 NC_009617.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pca:Pcar_1087 NADH:flavin oxidoreductase, Old Yellow enzyme family; NADH:flavin oxidoreductase 2513823 5293363 Cbei_2152 Clostridium beijerinckii NCIMB 8052 NADH:flavin oxidoreductase YP_001309275.1 2512744 D 290402 CDS YP_001309276.1 150017022 5293364 2513982..2514434 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: sfu:Sfum_1142 transcriptional regulator, MarR family; MarR family transcriptional regulator 2514434 5293364 Cbei_2153 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001309276.1 2513982 D 290402 CDS YP_001309277.1 150017023 5293365 2515006..2516436 1 NC_009617.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC3668 MDR-type permease; EmrB/QacA family drug resistance transporter 2516436 5293365 Cbei_2154 Clostridium beijerinckii NCIMB 8052 EmrB/QacA family drug resistance transporter YP_001309277.1 2515006 D 290402 CDS YP_001309278.1 150017024 5293366 complement(2516949..2517521) 1 NC_009617.1 hypothetical protein 2517521 5293366 Cbei_2155 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309278.1 2516949 R 290402 CDS YP_001309279.1 150017025 5293367 2518072..2519094 1 NC_009617.1 PFAM: 5'-3' exonuclease; SMART: Helix-hairpin-helix domain protein, class 2; KEGG: bcl:ABC2709 DNA-directed DNA polymerase I; 5'-3' exonuclease 2519094 5293367 Cbei_2156 Clostridium beijerinckii NCIMB 8052 5'-3' exonuclease YP_001309279.1 2518072 D 290402 CDS YP_001309280.1 150017026 5293368 2519247..2519609 1 NC_009617.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sat:SYN_00718 lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase 2519609 5293368 Cbei_2157 Clostridium beijerinckii NCIMB 8052 glyoxalase/bleomycin resistance protein/dioxygenase YP_001309280.1 2519247 D 290402 CDS YP_001309281.1 150017027 5293369 complement(2519728..2520063) 1 NC_009617.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: cth:Cthe_0063 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 2520063 5293369 Cbei_2158 Clostridium beijerinckii NCIMB 8052 rubredoxin-type Fe(Cys)4 protein YP_001309281.1 2519728 R 290402 CDS YP_001309282.1 150017028 5293370 2520288..2521376 1 NC_009617.1 KEGG: pfa:PF11_0317 structural maintenance of chromosome protein; hypothetical protein 2521376 5293370 Cbei_2159 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309282.1 2520288 D 290402 CDS YP_001309283.1 150017029 5293371 2521742..2524993 1 NC_009617.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; KEGG: swo:Swol_0601 signal transduction histidine kinase-like protein; multi-sensor hybrid histidine kinase 2524993 5293371 Cbei_2160 Clostridium beijerinckii NCIMB 8052 multi-sensor hybrid histidine kinase YP_001309283.1 2521742 D 290402 CDS YP_001309284.1 150017030 5293372 2525510..2526211 1 NC_009617.1 hypothetical protein 2526211 5293372 Cbei_2161 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309284.1 2525510 D 290402 CDS YP_001309285.1 150017031 5293373 complement(2526313..2526651) 1 NC_009617.1 PFAM: helix-turn-helix domain protein; KEGG: chy:CHY_1862 DNA-binding protein; XRE family transcriptional regulator 2526651 5293373 Cbei_2162 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001309285.1 2526313 R 290402 CDS YP_001309286.1 150017032 5293374 2527658..2527864 1 NC_009617.1 hypothetical protein 2527864 5293374 Cbei_2163 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309286.1 2527658 D 290402 CDS YP_001309287.1 150017033 5293375 2527911..2528135 1 NC_009617.1 hypothetical protein 2528135 5293375 Cbei_2164 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309287.1 2527911 D 290402 CDS YP_001309288.1 150017034 5293376 2528773..2529174 1 NC_009617.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: gsu:GSU2929 hypothetical protein; hemerythrin-like metal-binding protein 2529174 5293376 Cbei_2165 Clostridium beijerinckii NCIMB 8052 hemerythrin-like metal-binding protein YP_001309288.1 2528773 D 290402 CDS YP_001309289.1 150017035 5293377 2529288..2529680 1 NC_009617.1 hypothetical protein 2529680 5293377 Cbei_2166 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309289.1 2529288 D 290402 CDS YP_001309290.1 150017036 5293378 2530277..2530690 1 NC_009617.1 hypothetical protein 2530690 5293378 Cbei_2167 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309290.1 2530277 D 290402 CDS YP_001309291.1 150017037 5293379 2531231..2531437 1 NC_009617.1 hypothetical protein 2531437 5293379 Cbei_2168 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309291.1 2531231 D 290402 CDS YP_001309292.1 150017038 5293380 2531509..2531703 1 NC_009617.1 hypothetical protein 2531703 5293380 Cbei_2169 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309292.1 2531509 D 290402 CDS YP_001309293.1 150017039 5293381 2531745..2531933 1 NC_009617.1 hypothetical protein 2531933 5293381 Cbei_2170 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309293.1 2531745 D 290402 CDS YP_001309294.1 150017040 5293382 2532694..2535792 1 NC_009617.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; histidine kinase internal region; KEGG: dsy:DSY0460 hypothetical protein; signal transduction histidine kinase LytS 2535792 5293382 Cbei_2171 Clostridium beijerinckii NCIMB 8052 signal transduction histidine kinase LytS YP_001309294.1 2532694 D 290402 CDS YP_001309295.1 150017041 5293383 2535810..2536934 1 NC_009617.1 PFAM: response regulator receiver; KEGG: dsy:DSY0459 hypothetical protein; response regulator receiver/SARP domain-containing protein 2536934 5293383 Cbei_2172 Clostridium beijerinckii NCIMB 8052 response regulator receiver/SARP domain-containing protein YP_001309295.1 2535810 D 290402 CDS YP_001309296.1 150017042 5293384 2537216..2537464 1 NC_009617.1 PFAM: Septum formation topological specificity factor MinE; KEGG: cpr:CPR_2104 cell division topological specificity factor MinE; septum formation topological specificity factor MinE 2537464 5293384 Cbei_2173 Clostridium beijerinckii NCIMB 8052 septum formation topological specificity factor MinE YP_001309296.1 2537216 D 290402 CDS YP_001309297.1 150017043 5293385 2537757..2538122 1 NC_009617.1 PFAM: arsenate reductase and related; KEGG: ctc:CTC01181 arsenate reductase; arsenate reductase-like protein 2538122 5293385 Cbei_2174 Clostridium beijerinckii NCIMB 8052 arsenate reductase-like protein YP_001309297.1 2537757 D 290402 CDS YP_001309298.1 150017044 5293386 2538482..2540485 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: dsy:DSY4310 hypothetical protein; 2-isopropylmalate synthase 2540485 5293386 Cbei_2175 Clostridium beijerinckii NCIMB 8052 2-isopropylmalate synthase YP_001309298.1 2538482 D 290402 CDS YP_001309299.1 150017045 5293387 2541063..2541398 1 NC_009617.1 PFAM: protein of unknown function UPF0060; KEGG: cpr:CPR_1507 uncharacterized BCR, YnfA/UPF0060 family superfamily; hypothetical protein 2541398 5293387 Cbei_2176 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309299.1 2541063 D 290402 CDS YP_001309300.1 150017046 5293388 2541584..2541802 1 NC_009617.1 hypothetical protein 2541802 5293388 Cbei_2177 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309300.1 2541584 D 290402 CDS YP_001309301.1 150017047 5293389 2541835..2542068 1 NC_009617.1 hypothetical protein 2542068 5293389 Cbei_2178 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309301.1 2541835 D 290402 CDS YP_001309302.1 150017048 5293390 2542135..2542554 1 NC_009617.1 hypothetical protein 2542554 5293390 Cbei_2179 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309302.1 2542135 D 290402 CDS YP_001309303.1 150017049 5293391 2543783..2545747 1 NC_009617.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; SMART: ATPase AAA; KEGG: cno:NT01CX_0469 signal-transduction and transcriptional-control protein; Fis family GAF modulated sigma54 specific transcriptional regulator 2545747 5293391 Cbei_2180 Clostridium beijerinckii NCIMB 8052 Fis family GAF modulated sigma54 specific transcriptional regulator YP_001309303.1 2543783 D 290402 CDS YP_001309304.1 150017050 5293392 2546128..2547294 1 NC_009617.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: cpf:CPF_1465 NADPH-dependent butanol dehydrogenase; iron-containing alcohol dehydrogenase 2547294 5293392 Cbei_2181 Clostridium beijerinckii NCIMB 8052 iron-containing alcohol dehydrogenase YP_001309304.1 2546128 D 290402 CDS YP_001309305.1 150017051 5293393 2547673..2548563 1 NC_009617.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: cpf:CPF_1464 oxidoreductase, NAD-binding; ferredoxin-NADP(+) reductase subunit alpha 2548563 5293393 Cbei_2182 Clostridium beijerinckii NCIMB 8052 ferredoxin-NADP(+) reductase subunit alpha YP_001309305.1 2547673 D 290402 CDS YP_001309306.1 150017052 5293394 2548569..2549951 1 NC_009617.1 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase 2549951 5293394 Cbei_2183 Clostridium beijerinckii NCIMB 8052 oxidoreductase YP_001309306.1 2548569 D 290402 CDS YP_001309307.1 150017053 5293395 2550515..2551726 1 NC_009617.1 PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; KEGG: dsy:DSY2436 hypothetical protein; diguanylate phosphodiesterase 2551726 5293395 Cbei_2184 Clostridium beijerinckii NCIMB 8052 diguanylate phosphodiesterase YP_001309307.1 2550515 D 290402 CDS YP_001309308.1 150017054 5293396 2552582..2552824 1 NC_009617.1 hypothetical protein 2552824 5293396 Cbei_2185 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309308.1 2552582 D 290402 CDS YP_001309309.1 150017055 5293397 2553257..2554969 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01211 methyl-accepting chemotaxis protein TlpA; methyl-accepting chemotaxis sensory transducer 2554969 5293397 Cbei_2186 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001309309.1 2553257 D 290402 CDS YP_001309310.1 150017056 5293398 2556020..2556424 1 NC_009617.1 hypothetical protein 2556424 5293398 Cbei_2187 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309310.1 2556020 D 290402 CDS YP_001309311.1 150017057 5293399 complement(2556651..2557463) 1 NC_009617.1 KEGG: aci:ACIAD2621 tolerance to group A colicins, single-stranded filamentous DNA phage, required for OM integrity; hypothetical protein 2557463 5293399 Cbei_2188 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309311.1 2556651 R 290402 CDS YP_001309312.1 150017058 5293400 2557745..2558305 1 NC_009617.1 PFAM: nitroreductase; KEGG: bth:BT_1148 NADH dehydrogenase/NAD(P)H nitroreductase; nitroreductase 2558305 5293400 Cbei_2189 Clostridium beijerinckii NCIMB 8052 nitroreductase YP_001309312.1 2557745 D 290402 CDS YP_001309313.1 150017059 5293401 2558665..2559954 1 NC_009617.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: cac:CAC1422 uncharacterized hypothetical protein, YUGS B.subtilis ortholog; hypothetical protein 2559954 5293401 Cbei_2190 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309313.1 2558665 D 290402 CDS YP_001309314.1 150017060 5293402 complement(2560416..2561264) 1 NC_009617.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bha:BH2675 transcriptional regulator (RpiR family); RpiR family transcriptional regulator 2561264 5293402 Cbei_2191 Clostridium beijerinckii NCIMB 8052 RpiR family transcriptional regulator YP_001309314.1 2560416 R 290402 CDS YP_001309315.1 150017061 5293403 2561786..2562688 1 NC_009617.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 2562688 5293403 Cbei_2192 Clostridium beijerinckii NCIMB 8052 6-phosphogluconate dehydrogenase YP_001309315.1 2561786 D 290402 CDS YP_001309316.1 150017062 5293404 2562691..2563692 1 NC_009617.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: efa:EF3141 D-isomer specific 2-hydroxyacid dehydrogenase family protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 2563692 5293404 Cbei_2193 Clostridium beijerinckii NCIMB 8052 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit YP_001309316.1 2562691 D 290402 CDS YP_001309317.1 150017063 5293405 2563704..2564807 1 NC_009617.1 PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: efa:EF3140 alcohol dehydrogenase, iron-containing; iron-containing alcohol dehydrogenase 2564807 5293405 Cbei_2194 Clostridium beijerinckii NCIMB 8052 iron-containing alcohol dehydrogenase YP_001309317.1 2563704 D 290402 CDS YP_001309318.1 150017064 5293406 2564818..2565648 1 NC_009617.1 PFAM: phosphotransferase system PTS, sorbose-specific IIC subunit; KEGG: efa:EF3139 PTS system, IIC component; PTS system sorbose-specific transporter subunit IIC 2565648 5293406 Cbei_2195 Clostridium beijerinckii NCIMB 8052 PTS system sorbose-specific transporter subunit IIC YP_001309318.1 2564818 D 290402 CDS YP_001309319.1 150017065 5293407 2565661..2566518 1 NC_009617.1 PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: efa:EF3138 PTS system, IID component; PTS system mannose/fructose/sorbose family transporter subunit IID 2566518 5293407 Cbei_2196 Clostridium beijerinckii NCIMB 8052 PTS system mannose/fructose/sorbose family transporter subunit IID YP_001309319.1 2565661 D 290402 CDS YP_001309320.1 150017066 5293408 2566540..2567043 1 NC_009617.1 PFAM: PTS system sorbose subfamily IIB component; KEGG: efa:EF3137 PTS system, IIB component; PTS system sorbose subfamily transporter subunit IIB 2567043 5293408 Cbei_2197 Clostridium beijerinckii NCIMB 8052 PTS system sorbose subfamily transporter subunit IIB YP_001309320.1 2566540 D 290402 CDS YP_001309321.1 150017067 5293409 2567099..2567971 1 NC_009617.1 hypothetical protein 2567971 5293409 Cbei_2198 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309321.1 2567099 D 290402 CDS YP_001309322.1 150017068 5293410 2568048..2568500 1 NC_009617.1 PFAM: PTS system fructose subfamily IIA component; KEGG: efa:EF3136 PTS system, IIA component; PTS system fructose subfamily transporter subunit IIA 2568500 5293410 Cbei_2199 Clostridium beijerinckii NCIMB 8052 PTS system fructose subfamily transporter subunit IIA YP_001309322.1 2568048 D 290402 CDS YP_001309323.1 150017069 5293411 2568513..2569598 1 NC_009617.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase 2569598 5293411 Cbei_2200 Clostridium beijerinckii NCIMB 8052 mannonate dehydratase YP_001309323.1 2568513 D 290402 CDS YP_001309324.1 150017070 5293412 2569598..2570227 1 NC_009617.1 TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: efa:EF3134 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 2570227 5293412 Cbei_2201 Clostridium beijerinckii NCIMB 8052 2-dehydro-3-deoxyphosphogluconate aldolase YP_001309324.1 2569598 D 290402 CDS YP_001309325.1 150017071 5293413 2570510..2571433 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC3520 ABC-type transport system, ATPase component; ABC transporter ATPase 2571433 5293413 Cbei_2202 Clostridium beijerinckii NCIMB 8052 ABC transporter ATPase YP_001309325.1 2570510 D 290402 CDS YP_001309326.1 150017072 5293414 2571430..2572128 1 NC_009617.1 KEGG: cac:CAC3519 predicted membrane protein, possible permease; hypothetical protein 2572128 5293414 Cbei_2203 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309326.1 2571430 D 290402 CDS YP_001309327.1 150017073 5293415 2572140..2572730 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: cac:CAC3518 transcriptional regulators, AcrR family; TetR family transcriptional regulator 2572730 5293415 Cbei_2204 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001309327.1 2572140 D 290402 CDS YP_001309328.1 150017074 5293416 complement(2573005..2574429) 1 NC_009617.1 PFAM: GntR family transcriptional regulator; aminotransferase, class I and II; KEGG: dvl:Dvul_0077 transcriptional regulator, GntR family; GntR family transcriptional regulator 2574429 5293416 Cbei_2205 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001309328.1 2573005 R 290402 CDS YP_001309329.1 150017075 5293417 2574604..2574975 1 NC_009617.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: cac:CAC3526 FMN-binding protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 2574975 5293417 Cbei_2206 Clostridium beijerinckii NCIMB 8052 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001309329.1 2574604 D 290402 CDS YP_001309330.1 150017076 5293418 2575365..2576483 1 NC_009617.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: ctc:CTC01638 pleiotropic regulatory protein; DegT/DnrJ/EryC1/StrS aminotransferase 2576483 5293418 Cbei_2207 Clostridium beijerinckii NCIMB 8052 DegT/DnrJ/EryC1/StrS aminotransferase YP_001309330.1 2575365 D 290402 CDS YP_001309331.1 150017077 5293419 2576633..2577085 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bat:BAS2069 acetyltransferase, GNAT family; N-acetyltransferase GCN5 2577085 5293419 Cbei_2208 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001309331.1 2576633 D 290402 CDS YP_001309332.1 150017078 5293420 2578092..2578520 1 NC_009617.1 hypothetical protein 2578520 5293420 Cbei_2209 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309332.1 2578092 D 290402 CDS YP_001309333.1 150017079 5293421 complement(2578929..2579369) 1 NC_009617.1 PFAM: helix-turn-helix, HxlR type; KEGG: llm:llmg_1903 transcriptional regulator; HxlR family transcriptional regulator 2579369 5293421 Cbei_2210 Clostridium beijerinckii NCIMB 8052 HxlR family transcriptional regulator YP_001309333.1 2578929 R 290402 CDS YP_001309334.1 150017080 5293422 2579450..2580106 1 NC_009617.1 PFAM: NADPH-dependent FMN reductase; KEGG: mac:MA1860 iron-sulfur flavoprotein; NADPH-dependent FMN reductase 2580106 5293422 Cbei_2211 Clostridium beijerinckii NCIMB 8052 NADPH-dependent FMN reductase YP_001309334.1 2579450 D 290402 CDS YP_001309335.1 150017081 5293423 complement(2580448..2581272) 1 NC_009617.1 PFAM: Integral membrane protein TerC; KEGG: lpn:lpg2189 drug efflux protein; integral membrane protein TerC 2581272 5293423 Cbei_2212 Clostridium beijerinckii NCIMB 8052 integral membrane protein TerC YP_001309335.1 2580448 R 290402 CDS YP_001309336.1 150017082 5293424 2581760..2582614 1 NC_009617.1 PFAM: peptidase M48, Ste24p; KEGG: dsy:DSY4533 hypothetical protein; peptidase M48, Ste24p 2582614 5293424 Cbei_2213 Clostridium beijerinckii NCIMB 8052 peptidase M48, Ste24p YP_001309336.1 2581760 D 290402 CDS YP_001309337.1 150017083 5296368 complement(2583185..2583544) 1 NC_009617.1 PFAM: helix-turn-helix domain protein; KEGG: cpf:CPF_0928 transcriptional regulator, Cro/CI family; helix-turn-helix domain-containing protein 2583544 5296368 Cbei_2215 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001309337.1 2583185 R 290402 CDS YP_001309338.1 150017084 5293426 2583863..2584060 1 NC_009617.1 hypothetical protein 2584060 5293426 Cbei_2216 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309338.1 2583863 D 290402 CDS YP_001309339.1 150017085 5293427 2584548..2585819 1 NC_009617.1 TIGRFAM: phage replisome organizer, KEGG: lmo:lmo2317 similar to protein gp49; phage replisome organizer 2585819 5293427 Cbei_2217 Clostridium beijerinckii NCIMB 8052 phage replisome organizer YP_001309339.1 2584548 D 290402 CDS YP_001309340.1 150017086 5293428 2585869..2586495 1 NC_009617.1 KEGG: bha:BH3541 hypothetical protein; hypothetical protein 2586495 5293428 Cbei_2218 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309340.1 2585869 D 290402 CDS YP_001309341.1 150017087 5293429 2586729..2586971 1 NC_009617.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: cac:CAC1941 transcription regulator AbrB; AbrB family transcriptional regulator 2586971 5293429 Cbei_2219 Clostridium beijerinckii NCIMB 8052 AbrB family transcriptional regulator YP_001309341.1 2586729 D 290402 CDS YP_001309342.1 150017088 5296369 2587308..2587721 1 NC_009617.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; Helix-turn-helix, type 11 domain protein; KEGG: bha:BH0656 hypothetical protein; BadM/Rrf2 family transcriptional regulator 2587721 5296369 Cbei_2221 Clostridium beijerinckii NCIMB 8052 BadM/Rrf2 family transcriptional regulator YP_001309342.1 2587308 D 290402 CDS YP_001309343.1 150017089 5293431 2587806..2589194 1 NC_009617.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cpr:CPR_2544 MATE efflux family protein; MATE efflux family protein 2589194 5293431 Cbei_2222 Clostridium beijerinckii NCIMB 8052 MATE efflux family protein YP_001309343.1 2587806 D 290402 CDS YP_001309344.1 150017090 5293432 complement(2589306..2589524) 1 NC_009617.1 KEGG: chy:CHY_0145 hypothetical protein; hypothetical protein 2589524 5293432 Cbei_2223 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309344.1 2589306 R 290402 CDS YP_001309345.1 150017091 5293433 complement(2589786..2590010) 1 NC_009617.1 hypothetical protein 2590010 5293433 Cbei_2224 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309345.1 2589786 R 290402 CDS YP_001309346.1 150017092 5293434 2590312..2590518 1 NC_009617.1 PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: cpr:CPR_1411 small, acid-soluble spore protein; small acid-soluble spore protein, alpha/beta type 2590518 5293434 Cbei_2225 Clostridium beijerinckii NCIMB 8052 small acid-soluble spore protein, alpha/beta type YP_001309346.1 2590312 D 290402 CDS YP_001309347.1 150017093 5293435 complement(2590658..2591374) 1 NC_009617.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: ctc:CTC00979 membrane spanning protein; hypothetical protein 2591374 5293435 Cbei_2226 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309347.1 2590658 R 290402 CDS YP_001309348.1 150017094 5293436 2591653..2592540 1 NC_009617.1 PFAM: transcriptional regulator TrmB; KEGG: bsu:BG12303 similar to cyclodextrin metabolism protein; transcriptional regulator TrmB 2592540 5293436 Cbei_2227 Clostridium beijerinckii NCIMB 8052 transcriptional regulator TrmB YP_001309348.1 2591653 D 290402 CDS YP_001309349.1 150017095 5293437 complement(2592598..2593911) 1 NC_009617.1 KEGG: bcl:ABC3181 hypothetical protein; transcriptional regulator 2593911 5293437 Cbei_2228 Clostridium beijerinckii NCIMB 8052 transcriptional regulator YP_001309349.1 2592598 R 290402 CDS YP_001309350.1 150017096 5293438 2594138..2595361 1 NC_009617.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: cpf:CPF_1002 amidohydrolase family protein; amidohydrolase 2595361 5293438 Cbei_2229 Clostridium beijerinckii NCIMB 8052 amidohydrolase YP_001309350.1 2594138 D 290402 CDS YP_001309351.1 150017097 5293439 2595393..2596223 1 NC_009617.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpc:RPC_0631 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 2596223 5293439 Cbei_2230 Clostridium beijerinckii NCIMB 8052 enoyl-CoA hydratase/isomerase YP_001309351.1 2595393 D 290402 CDS YP_001309352.1 150017098 5293440 2596366..2597202 1 NC_009617.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mes:Meso_0481 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 2597202 5293440 Cbei_2231 Clostridium beijerinckii NCIMB 8052 enoyl-CoA hydratase/isomerase YP_001309352.1 2596366 D 290402 CDS YP_001309353.1 150017099 5293441 2597343..2598551 1 NC_009617.1 PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; KEGG: bfs:BF1216 L-serine dehydratase; serine dehydratase subunit alpha 2598551 5293441 Cbei_2232 Clostridium beijerinckii NCIMB 8052 serine dehydratase subunit alpha YP_001309353.1 2597343 D 290402 CDS YP_001309354.1 150017100 5293442 2599132..2600832 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01881 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2600832 5293442 Cbei_2233 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001309354.1 2599132 D 290402 CDS YP_001309355.1 150017101 5293443 2600970..2601539 1 NC_009617.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: bsu:BG10035 similar to unknown proteins from B. subtilis; deaminase-reductase domain-containing protein 2601539 5293443 Cbei_2234 Clostridium beijerinckii NCIMB 8052 deaminase-reductase domain-containing protein YP_001309355.1 2600970 D 290402 CDS YP_001309356.1 150017102 5293444 complement(2601536..2601721) 1 NC_009617.1 hypothetical protein 2601721 5293444 Cbei_2235 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309356.1 2601536 R 290402 CDS YP_001309357.1 150017103 5293445 2602200..2602442 1 NC_009617.1 hypothetical protein 2602442 5293445 Cbei_2236 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309357.1 2602200 D 290402 CDS YP_001309358.1 150017104 5293446 complement(2602512..2603084) 1 NC_009617.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: ctc:pE88_11 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 factor 2603084 5293446 Cbei_2237 Clostridium beijerinckii NCIMB 8052 ECF subfamily RNA polymerase sigma-24 factor YP_001309358.1 2602512 R 290402 CDS YP_001309359.1 150017105 5293447 2604033..2605478 1 NC_009617.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC3346 MDR-type permease; EmrB/QacA family drug resistance transporter 2605478 5293447 Cbei_2238 Clostridium beijerinckii NCIMB 8052 EmrB/QacA family drug resistance transporter YP_001309359.1 2604033 D 290402 CDS YP_001309360.1 150017106 5293448 complement(2605797..2606192) 1 NC_009617.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: cac:CAC2569 NimC/NimA family protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 2606192 5293448 Cbei_2239 Clostridium beijerinckii NCIMB 8052 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001309360.1 2605797 R 290402 CDS YP_001309361.1 150017107 5296370 2606860..2607300 1 NC_009617.1 PFAM: protein of unknown function DUF861, cupin_3; Cupin 2, conserved barrel domain protein; KEGG: mxa:MXAN_0409 cupin domain protein; cupin 2607300 5296370 Cbei_2241 Clostridium beijerinckii NCIMB 8052 cupin YP_001309361.1 2606860 D 290402 CDS YP_001309362.1 150017108 5293450 complement(2607365..2607694) 1 NC_009617.1 PFAM: helix-turn-helix, HxlR type; KEGG: spm:spyM18_2160 hypothetical protein; HxlR family transcriptional regulator 2607694 5293450 Cbei_2242 Clostridium beijerinckii NCIMB 8052 HxlR family transcriptional regulator YP_001309362.1 2607365 R 290402 CDS YP_001309363.1 150017109 5293451 complement(2608186..2609223) 1 NC_009617.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sma:SAV676 dehydrogenase; alcohol dehydrogenase 2609223 5293451 Cbei_2243 Clostridium beijerinckii NCIMB 8052 alcohol dehydrogenase YP_001309363.1 2608186 R 290402 CDS YP_001309364.1 150017110 5293452 2609368..2609724 1 NC_009617.1 PFAM: helix-turn-helix, HxlR type; KEGG: cac:CAC0195 predicted transcriptional regulator; HxlR family transcriptional regulator 2609724 5293452 Cbei_2244 Clostridium beijerinckii NCIMB 8052 HxlR family transcriptional regulator YP_001309364.1 2609368 D 290402 CDS YP_001309365.1 150017111 5296371 2610273..2610608 1 NC_009617.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: cps:CPS_2465 hypothetical protein; cupin 2610608 5296371 Cbei_2246 Clostridium beijerinckii NCIMB 8052 cupin YP_001309365.1 2610273 D 290402 CDS YP_001309366.1 150017112 5293454 complement(2610803..2610955) 1 NC_009617.1 hypothetical protein 2610955 5293454 Cbei_2247 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309366.1 2610803 R 290402 CDS YP_001309367.1 150017113 5293455 2611358..2611915 1 NC_009617.1 KEGG: bce:BC4829 ribosomal RNA adenine dimethylase; ribosomal RNA adenine dimethylase 2611915 5293455 Cbei_2248 Clostridium beijerinckii NCIMB 8052 ribosomal RNA adenine dimethylase YP_001309367.1 2611358 D 290402 CDS YP_001309368.1 150017114 5293456 2612293..2612976 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ctc:CTC00805 two-component response regulator; two component transcriptional regulator 2612976 5293456 Cbei_2249 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001309368.1 2612293 D 290402 CDS YP_001309369.1 150017115 5293457 2613072..2614052 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: ctc:CTC00806 sensory transduction protein kinase; histidine kinase 2614052 5293457 Cbei_2250 Clostridium beijerinckii NCIMB 8052 histidine kinase YP_001309369.1 2613072 D 290402 CDS YP_001309370.1 150017116 5293458 2614343..2614972 1 NC_009617.1 PFAM: SNARE associated Golgi protein; KEGG: ctc:CTC01769 membrane spanning protein; hypothetical protein 2614972 5293458 Cbei_2251 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309370.1 2614343 D 290402 CDS YP_001309371.1 150017117 5293459 2615136..2615822 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ctc:CTC00805 two-component response regulator; two component transcriptional regulator 2615822 5293459 Cbei_2252 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001309371.1 2615136 D 290402 CDS YP_001309372.1 150017118 5293460 complement(2616749..2616937) 1 NC_009617.1 hypothetical protein 2616937 5293460 Cbei_2253 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309372.1 2616749 R 290402 CDS YP_001309373.1 150017119 5293461 complement(2617035..2617565) 1 NC_009617.1 hypothetical protein 2617565 5293461 Cbei_2254 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309373.1 2617035 R 290402 CDS YP_001309374.1 150017120 5293462 2617923..2618165 1 NC_009617.1 hypothetical protein 2618165 5293462 Cbei_2255 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309374.1 2617923 D 290402 CDS YP_001309375.1 150017121 5293463 2618223..2618381 1 NC_009617.1 hypothetical protein 2618381 5293463 Cbei_2256 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309375.1 2618223 D 290402 CDS YP_001309376.1 150017122 5293464 2618457..2618846 1 NC_009617.1 KEGG: cpr:CPR_1211 hypothetical protein; hypothetical protein 2618846 5293464 Cbei_2257 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309376.1 2618457 D 290402 CDS YP_001309377.1 150017123 5293465 2618979..2620238 1 NC_009617.1 PFAM: glycosyl transferase, family 28; KEGG: sth:STH2411 UDP-glucose:sterol glucosyltransferase; sterol 3-beta-glucosyltransferase 2620238 5293465 Cbei_2258 Clostridium beijerinckii NCIMB 8052 sterol 3-beta-glucosyltransferase YP_001309377.1 2618979 D 290402 CDS YP_001309378.1 150017124 5293466 2620833..2622509 1 NC_009617.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: tte:TTE1253 predicted hydrolase of the metallo-beta-lactamase superfamily; beta-lactamase domain-containing protein 2622509 5293466 Cbei_2259 Clostridium beijerinckii NCIMB 8052 beta-lactamase domain-containing protein YP_001309378.1 2620833 D 290402 CDS YP_001309379.1 150017125 5293467 complement(2622851..2623096) 1 NC_009617.1 hypothetical protein 2623096 5293467 Cbei_2260 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309379.1 2622851 R 290402 CDS YP_001309380.1 150017126 5293468 complement(2623472..2624074) 1 NC_009617.1 PFAM: Lytic transglycosylase, catalytic; lytic transglycosylase 2624074 5293468 Cbei_2261 Clostridium beijerinckii NCIMB 8052 lytic transglycosylase YP_001309380.1 2623472 R 290402 CDS YP_001309381.1 150017127 5296373 2626357..2627190 1 NC_009617.1 KEGG: ctc:pE88_44 hypothetical protein; hypothetical protein 2627190 5296373 Cbei_2264 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309381.1 2626357 D 290402 CDS YP_001309382.1 150017128 5293470 complement(2629164..2629523) 1 NC_009617.1 PFAM: helix-turn-helix domain protein; KEGG: cpf:CPF_0928 transcriptional regulator, Cro/CI family; helix-turn-helix domain-containing protein 2629523 5293470 Cbei_2265 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001309382.1 2629164 R 290402 CDS YP_001309383.1 150017129 5293471 2629982..2630179 1 NC_009617.1 hypothetical protein 2630179 5293471 Cbei_2266 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309383.1 2629982 D 290402 CDS YP_001309384.1 150017130 5293472 2630298..2630558 1 NC_009617.1 hypothetical protein 2630558 5293472 Cbei_2267 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309384.1 2630298 D 290402 CDS YP_001309385.1 150017131 5293473 2630786..2632135 1 NC_009617.1 TIGRFAM: phage replisome organizer, KEGG: lmo:lmo2317 similar to protein gp49; phage replisome organizer 2632135 5293473 Cbei_2268 Clostridium beijerinckii NCIMB 8052 phage replisome organizer YP_001309385.1 2630786 D 290402 CDS YP_001309386.1 150017132 5293474 2632185..2632811 1 NC_009617.1 KEGG: bha:BH3541 hypothetical protein; hypothetical protein 2632811 5293474 Cbei_2269 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309386.1 2632185 D 290402 CDS YP_001309387.1 150017133 5293475 2632926..2633168 1 NC_009617.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: cac:CAC3649 possible stage V sporulation protein T, transcriptional regulator AbrB homolog; AbrB family transcriptional regulator 2633168 5293475 Cbei_2270 Clostridium beijerinckii NCIMB 8052 AbrB family transcriptional regulator YP_001309387.1 2632926 D 290402 CDS YP_001309388.1 150017134 5293476 2633170..2633562 1 NC_009617.1 hypothetical protein 2633562 5293476 Cbei_2271 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309388.1 2633170 D 290402 CDS YP_001309389.1 150017135 5293477 2633641..2634396 1 NC_009617.1 PFAM: BRO domain protein domain protein; KEGG: cth:Cthe_2462 BRO-like protein; prophage antirepressor 2634396 5293477 Cbei_2272 Clostridium beijerinckii NCIMB 8052 prophage antirepressor YP_001309389.1 2633641 D 290402 CDS YP_001309390.1 150017136 5293478 complement(2634475..2634693) 1 NC_009617.1 KEGG: chy:CHY_0145 hypothetical protein; hypothetical protein 2634693 5293478 Cbei_2273 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309390.1 2634475 R 290402 CDS YP_001309391.1 150017137 5293479 complement(2634809..2635033) 1 NC_009617.1 hypothetical protein 2635033 5293479 Cbei_2274 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309391.1 2634809 R 290402 CDS YP_001309392.1 150017138 5293480 2635168..2635884 1 NC_009617.1 KEGG: cno:NT01CX_2185 hypothetical protein; hypothetical protein 2635884 5293480 Cbei_2275 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309392.1 2635168 D 290402 CDS YP_001309393.1 150017139 5293481 2636931..2638634 1 NC_009617.1 catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 2638634 5293481 Cbei_2276 Clostridium beijerinckii NCIMB 8052 hydroxylamine reductase YP_001309393.1 2636931 D 290402 CDS YP_001309394.1 150017140 5293482 2638796..2639509 1 NC_009617.1 PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: ctc:CTC01876 transcriptional regulatory protein; Crp/Fnr family transcriptional regulator 2639509 5293482 Cbei_2277 Clostridium beijerinckii NCIMB 8052 Crp/Fnr family transcriptional regulator YP_001309394.1 2638796 D 290402 CDS YP_001309395.1 150017141 5293483 2639635..2639868 1 NC_009617.1 KEGG: gka:GK0762 hypothetical protein; hypothetical protein 2639868 5293483 Cbei_2278 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309395.1 2639635 D 290402 CDS YP_001309396.1 150017142 5293484 2640133..2640294 1 NC_009617.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: sfu:Sfum_3222 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 2640294 5293484 Cbei_2279 Clostridium beijerinckii NCIMB 8052 rubredoxin-type Fe(Cys)4 protein YP_001309396.1 2640133 D 290402 CDS YP_001309397.1 150017143 5293485 2640589..2642247 1 NC_009617.1 catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 2642247 5293485 Cbei_2280 Clostridium beijerinckii NCIMB 8052 hydroxylamine reductase YP_001309397.1 2640589 D 290402 CDS YP_001309398.1 150017144 5293486 2642515..2643288 1 NC_009617.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: btk:BT9727_1331 nitric oxide dioxygenase; oxidoreductase FAD/NAD(P)-binding subunit 2643288 5293486 Cbei_2281 Clostridium beijerinckii NCIMB 8052 oxidoreductase FAD/NAD(P)-binding subunit YP_001309398.1 2642515 D 290402 CDS YP_001309399.1 150017145 5293487 2643321..2644787 1 NC_009617.1 PFAM: aldehyde dehydrogenase; KEGG: cpe:CPE2438 NADP-dependent glyceraldehyde-3-phosphate dehydrogenas; aldehyde dehydrogenase 2644787 5293487 Cbei_2282 Clostridium beijerinckii NCIMB 8052 aldehyde dehydrogenase YP_001309399.1 2643321 D 290402 CDS YP_001309400.1 150017146 5293488 2644927..2645343 1 NC_009617.1 TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: cac:CAC0587 flavodoxin; flavodoxin 2645343 5293488 Cbei_2283 Clostridium beijerinckii NCIMB 8052 flavodoxin YP_001309400.1 2644927 D 290402 CDS YP_001309401.1 150017147 5293489 complement(2645460..2647094) 1 NC_009617.1 catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 2647094 5293489 Cbei_2284 Clostridium beijerinckii NCIMB 8052 hydroxylamine reductase YP_001309401.1 2645460 R 290402 CDS YP_001309402.1 150017148 5293490 2647468..2647680 1 NC_009617.1 hypothetical protein 2647680 5293490 Cbei_2285 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309402.1 2647468 D 290402 CDS YP_001309403.1 150017149 5296374 2648508..2649200 1 NC_009617.1 PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: ctc:CTC00656 conserved protein (peptidoglycan binding); ErfK/YbiS/YcfS/YnhG family protein 2649200 5296374 Cbei_2287 Clostridium beijerinckii NCIMB 8052 ErfK/YbiS/YcfS/YnhG family protein YP_001309403.1 2648508 D 290402 CDS YP_001309404.1 150017150 5293492 complement(2649243..2649428) 1 NC_009617.1 hypothetical protein 2649428 5293492 Cbei_2288 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309404.1 2649243 R 290402 CDS YP_001309405.1 150017151 5293493 2649797..2650141 1 NC_009617.1 hypothetical protein 2650141 5293493 Cbei_2289 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309405.1 2649797 D 290402 CDS YP_001309406.1 150017152 5293494 2650670..2650969 1 NC_009617.1 hypothetical protein 2650969 5293494 Cbei_2290 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309406.1 2650670 D 290402 CDS YP_001309407.1 150017153 5293495 2651199..2651474 1 NC_009617.1 hypothetical protein 2651474 5293495 Cbei_2291 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309407.1 2651199 D 290402 CDS YP_001309408.1 150017154 5293496 2652733..2654493 1 NC_009617.1 PFAM: restriction endonuclease; KEGG: cph:Cpha266_1614 restriction endonuclease; restriction endonuclease 2654493 5293496 Cbei_2292 Clostridium beijerinckii NCIMB 8052 restriction endonuclease YP_001309408.1 2652733 D 290402 CDS YP_001309409.1 150017155 5293497 complement(2654821..2655063) 1 NC_009617.1 hypothetical protein 2655063 5293497 Cbei_2293 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309409.1 2654821 R 290402 CDS YP_001309410.1 150017156 5293498 2655668..2656066 1 NC_009617.1 hypothetical protein 2656066 5293498 Cbei_2294 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309410.1 2655668 D 290402 CDS YP_001309411.1 150017157 5293499 2657858..2658493 1 NC_009617.1 PFAM: chloramphenicol acetyltransferase; KEGG: cac:CAC0235 chloramphenicol acetyltransferase; chloramphenicol O-acetyltransferase 2658493 5293499 Cbei_2295 Clostridium beijerinckii NCIMB 8052 chloramphenicol O-acetyltransferase YP_001309411.1 2657858 D 290402 CDS YP_001309412.1 150017158 5293500 2658617..2658901 1 NC_009617.1 hypothetical protein 2658901 5293500 Cbei_2296 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309412.1 2658617 D 290402 CDS YP_001309413.1 150017159 5293501 2659072..2659590 1 NC_009617.1 hypothetical protein 2659590 5293501 Cbei_2297 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309413.1 2659072 D 290402 CDS YP_001309414.1 150017160 5293502 complement(2659815..2660015) 1 NC_009617.1 hypothetical protein 2660015 5293502 Cbei_2298 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309414.1 2659815 R 290402 CDS YP_001309415.1 150017161 5293503 complement(2660113..2660640) 1 NC_009617.1 hypothetical protein 2660640 5293503 Cbei_2299 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309415.1 2660113 R 290402 CDS YP_001309416.1 150017162 5293504 2660928..2661170 1 NC_009617.1 hypothetical protein 2661170 5293504 Cbei_2300 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309416.1 2660928 D 290402 CDS YP_001309417.1 150017163 5293505 2661325..2663250 1 NC_009617.1 KEGG: cpr:CPR_0832 hypothetical protein; hypothetical protein 2663250 5293505 Cbei_2301 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309417.1 2661325 D 290402 CDS YP_001309418.1 150017164 5293506 2663334..2664410 1 NC_009617.1 KEGG: cpe:CPE1288 hypothetical protein; hypothetical protein 2664410 5293506 Cbei_2302 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309418.1 2663334 D 290402 CDS YP_001309419.1 150017165 5293507 complement(2664511..2665077) 1 NC_009617.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: ctc:pE88_11 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 factor 2665077 5293507 Cbei_2303 Clostridium beijerinckii NCIMB 8052 ECF subfamily RNA polymerase sigma-24 factor YP_001309419.1 2664511 R 290402 CDS YP_001309420.1 150017166 5293508 2665344..2666129 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; cell wall hydrolase/autolysin; KEGG: ava:Ava_4396 peptidoglycan-binding domain 1; cell wall hydrolase/autolysin 2666129 5293508 Cbei_2304 Clostridium beijerinckii NCIMB 8052 cell wall hydrolase/autolysin YP_001309420.1 2665344 D 290402 CDS YP_001309421.1 150017167 5293509 2666464..2670039 1 NC_009617.1 KEGG: pfa:MAL13P1.202 hypothetical protein; hypothetical protein 2670039 5293509 Cbei_2305 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309421.1 2666464 D 290402 CDS YP_001309422.1 150017168 5293510 2671309..2672478 1 NC_009617.1 PFAM: phage integrase family protein; KEGG: tte:TTE2127 integrase; phage integrase family protein 2672478 5293510 Cbei_2306 Clostridium beijerinckii NCIMB 8052 phage integrase family protein YP_001309422.1 2671309 D 290402 CDS YP_001309423.1 150017169 5296375 complement(2673240..2673608) 1 NC_009617.1 KEGG: rme:Rmet_0127 cobalamin synthesis protein, P47K; hypothetical protein 2673608 5296375 Cbei_2307 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309423.1 2673240 R 290402 CDS YP_001309424.1 150017170 5293512 2673967..2674218 1 NC_009617.1 KEGG: ctc:CTC01538 hypothetical protein; hypothetical protein 2674218 5293512 Cbei_2308 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309424.1 2673967 D 290402 CDS YP_001309425.1 150017171 5293513 2674829..2675653 1 NC_009617.1 PFAM: anaerobic cobalt chelatase; KEGG: cpr:CPR_1242 anaerobic cobalt chelatase, CbiK; anaerobic cobalt chelatase 2675653 5293513 Cbei_2309 Clostridium beijerinckii NCIMB 8052 anaerobic cobalt chelatase YP_001309425.1 2674829 D 290402 CDS YP_001309426.1 150017172 5293514 2675735..2677114 1 NC_009617.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 2677114 5293514 Cbei_2310 Clostridium beijerinckii NCIMB 8052 cobyrinic acid a,c-diamide synthase YP_001309426.1 2675735 D 290402 CDS YP_001309427.1 150017173 5293515 2677182..2677805 1 NC_009617.1 catalyzes the interconversion of precorrin-8X and cobyrinic acid; precorrin-8X methylmutase 2677805 cbiC 5293515 cbiC Clostridium beijerinckii NCIMB 8052 precorrin-8X methylmutase YP_001309427.1 2677182 D 290402 CDS YP_001309428.1 150017174 5293516 2677863..2679047 1 NC_009617.1 Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase 2679047 cbiD 5293516 cbiD Clostridium beijerinckii NCIMB 8052 cobalt-precorrin-6A synthase YP_001309428.1 2677863 D 290402 CDS YP_001309429.1 150017175 5293517 2679159..2679773 1 NC_009617.1 TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: cpf:CPF_1433 precorrin-6y C5,15-methyltransferase (decarboxylating); precorrin-6y C5,15-methyltransferase subunit CbiE 2679773 5293517 Cbei_2313 Clostridium beijerinckii NCIMB 8052 precorrin-6y C5,15-methyltransferase subunit CbiE YP_001309429.1 2679159 D 290402 CDS YP_001309430.1 150017176 5293518 2679840..2680412 1 NC_009617.1 TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: conserved hypothetical protein 95; KEGG: cpf:CPF_1432 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; precorrin-6y C5,15-methyltransferase subunit CbiT 2680412 5293518 Cbei_2314 Clostridium beijerinckii NCIMB 8052 precorrin-6y C5,15-methyltransferase subunit CbiT YP_001309430.1 2679840 D 290402 CDS YP_001309431.1 150017177 5293519 2680560..2681225 1 NC_009617.1 catalyzes the formation of precorrin-3A from precorrin-2; cobalt-precorrin-2 C(20)-methyltransferase 2681225 5293519 Cbei_2315 Clostridium beijerinckii NCIMB 8052 cobalt-precorrin-2 C(20)-methyltransferase YP_001309431.1 2680560 D 290402 CDS YP_001309432.1 150017178 5293520 2681276..2682046 1 NC_009617.1 TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ctc:CTC00736 precorrin-3 methylase; precorrin-4 C(11)-methyltransferase 2682046 5293520 Cbei_2316 Clostridium beijerinckii NCIMB 8052 precorrin-4 C(11)-methyltransferase YP_001309432.1 2681276 D 290402 CDS YP_001309433.1 150017179 5293521 2682033..2683166 1 NC_009617.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: cpe:CPE1221 precorrin methylase; cobalamin (vitamin B12) biosynthesis protein CbiG 2683166 5293521 Cbei_2317 Clostridium beijerinckii NCIMB 8052 cobalamin (vitamin B12) biosynthesis protein CbiG YP_001309433.1 2682033 D 290402 CDS YP_001309434.1 150017180 5293522 2683262..2683894 1 NC_009617.1 hypothetical protein 2683894 5293522 Cbei_2318 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309434.1 2683262 D 290402 CDS YP_001309435.1 150017181 5293523 complement(2684080..2684799) 1 NC_009617.1 PFAM: GntR family transcriptional regulator; UbiC transcription regulator-associated domain protein; KEGG: lpl:lp_2924 transcription regulator; GntR family transcriptional regulator 2684799 5293523 Cbei_2319 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001309435.1 2684080 R 290402 CDS YP_001309436.1 150017182 5293524 2685611..2687029 1 NC_009617.1 TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: lmo:lmo1255 similar to PTS system trehalose specific enzyme IIBC; PTS system trehalose-specific transporter subunit IIBC 2687029 5293524 Cbei_2320 Clostridium beijerinckii NCIMB 8052 PTS system trehalose-specific transporter subunit IIBC YP_001309436.1 2685611 D 290402 CDS YP_001309437.1 150017183 5293525 2687048..2688700 1 NC_009617.1 TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: cpe:CPE0562 trehalose-6-phosphate hydrolase; alpha,alpha-phosphotrehalase 2688700 5293525 Cbei_2321 Clostridium beijerinckii NCIMB 8052 alpha,alpha-phosphotrehalase YP_001309437.1 2687048 D 290402 CDS YP_001309438.1 150017184 5293526 2689368..2689859 1 NC_009617.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: cac:CAC3602 HD superfamily hydrolase; metal dependent phosphohydrolase 2689859 5293526 Cbei_2322 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001309438.1 2689368 D 290402 CDS YP_001309439.1 150017185 5293527 2689881..2690321 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cpr:CPR_0856 acetyltransferase, GNAT family; N-acetyltransferase GCN5 2690321 5293527 Cbei_2323 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001309439.1 2689881 D 290402 CDS YP_001309440.1 150017186 5293528 complement(2690473..2690793) 1 NC_009617.1 PFAM: protein of unknown function DUF1540; KEGG: cpr:CPR_2328 hypothetical protein; hypothetical protein 2690793 5293528 Cbei_2324 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309440.1 2690473 R 290402 CDS YP_001309441.1 150017187 5293529 complement(2690838..2691383) 1 NC_009617.1 PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: cpe:CPE2618 hypothetical protein; rubrerythrin 2691383 5293529 Cbei_2325 Clostridium beijerinckii NCIMB 8052 rubrerythrin YP_001309441.1 2690838 R 290402 CDS YP_001309442.1 150017188 5293530 2691576..2692229 1 NC_009617.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: smu:SMU.1254 conserved hypothetical protein; HAD family hydrolase 2692229 5293530 Cbei_2326 Clostridium beijerinckii NCIMB 8052 HAD family hydrolase YP_001309442.1 2691576 D 290402 CDS YP_001309443.1 150017189 5293531 2692421..2692603 1 NC_009617.1 KEGG: cpr:CPR_2639 hypothetical protein; hypothetical protein 2692603 5293531 Cbei_2327 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309443.1 2692421 D 290402 CDS YP_001309444.1 150017190 5293532 2692741..2693667 1 NC_009617.1 PFAM: LysR family transcriptional regulator; KEGG: swo:Swol_0935 LysR-type transcriptional regulator; LysR family transcriptional regulator 2693667 5293532 Cbei_2328 Clostridium beijerinckii NCIMB 8052 LysR family transcriptional regulator YP_001309444.1 2692741 D 290402 CDS YP_001309445.1 150017191 5293533 2693688..2694809 1 NC_009617.1 PFAM: Methionine synthase, vitamin-B12 independent; KEGG: eca:ECA1113 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; methionine synthase, vitamin-B12 independent 2694809 5293533 Cbei_2329 Clostridium beijerinckii NCIMB 8052 methionine synthase, vitamin-B12 independent YP_001309445.1 2693688 D 290402 CDS YP_001309446.1 150017192 5293534 2694974..2696110 1 NC_009617.1 PFAM: Methionine synthase, vitamin-B12 independent; KEGG: dsy:DSY3878 hypothetical protein; methionine synthase, vitamin-B12 independent 2696110 5293534 Cbei_2330 Clostridium beijerinckii NCIMB 8052 methionine synthase, vitamin-B12 independent YP_001309446.1 2694974 D 290402 CDS YP_001309447.1 150017193 5293535 2696202..2696966 1 NC_009617.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sat:SYN_01581 endonuclease/exonuclease/phosphatase family protein; endonuclease/exonuclease/phosphatase 2696966 5293535 Cbei_2331 Clostridium beijerinckii NCIMB 8052 endonuclease/exonuclease/phosphatase YP_001309447.1 2696202 D 290402 CDS YP_001309448.1 150017194 5293536 2697452..2697973 1 NC_009617.1 PFAM: 3D domain protein; hypothetical protein 2697973 5293536 Cbei_2332 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309448.1 2697452 D 290402 CDS YP_001309449.1 150017195 5293537 2698202..2698882 1 NC_009617.1 PFAM: RelA/SpoT domain protein; KEGG: cac:CAC3340 uncharacterized conserved domain seen in the bacterial SpoT; RelA/SpoT domain-containing protein 2698882 5293537 Cbei_2333 Clostridium beijerinckii NCIMB 8052 RelA/SpoT domain-containing protein YP_001309449.1 2698202 D 290402 CDS YP_001309450.1 150017196 5293538 2698896..2699462 1 NC_009617.1 PFAM: nitroreductase; KEGG: sat:SYN_01293 oxygen-insensitive NAD(P)H nitroreductase / dihydropteridine reductase; nitroreductase 2699462 5293538 Cbei_2334 Clostridium beijerinckii NCIMB 8052 nitroreductase YP_001309450.1 2698896 D 290402 CDS YP_001309451.1 150017197 5293539 2699754..2699957 1 NC_009617.1 PFAM: Heavy metal transport/detoxification protein; KEGG: cpf:CPF_1453 heavy-metal-associated domain protein; heavy metal transport/detoxification protein 2699957 5293539 Cbei_2335 Clostridium beijerinckii NCIMB 8052 heavy metal transport/detoxification protein YP_001309451.1 2699754 D 290402 CDS YP_001309452.1 150017198 5293540 complement(2700056..2700463) 1 NC_009617.1 PFAM: protein of unknown function UPF0047; KEGG: cpf:CPF_0551 conserved hypothetical protein TIGR00149; hypothetical protein 2700463 5293540 Cbei_2336 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309452.1 2700056 R 290402 CDS YP_001309453.1 150017199 5293541 2700930..2701385 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_2017 choline binding protein A; cell wall binding repeat-containing protein 2701385 5293541 Cbei_2337 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001309453.1 2700930 D 290402 CDS YP_001309454.1 150017200 5293542 complement(2701567..2701956) 1 NC_009617.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: cth:Cthe_3118 hemerythrin-like metal-binding protein; hemerythrin-like metal-binding protein 2701956 5293542 Cbei_2338 Clostridium beijerinckii NCIMB 8052 hemerythrin-like metal-binding protein YP_001309454.1 2701567 R 290402 CDS YP_001309455.1 150017201 5293543 2702289..2702834 1 NC_009617.1 PFAM: phosphoesterase, PA-phosphatase related; KEGG: cpr:CPR_1102 probable phosphatase; PA-phosphatase-like phosphoesterase 2702834 5293543 Cbei_2339 Clostridium beijerinckii NCIMB 8052 PA-phosphatase-like phosphoesterase YP_001309455.1 2702289 D 290402 CDS YP_001309456.1 150017202 5293544 2703011..2703370 1 NC_009617.1 KEGG: lic:LIC13297 hypothetical protein; hypothetical protein 2703370 5293544 Cbei_2340 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309456.1 2703011 D 290402 CDS YP_001309457.1 150017203 5293545 2703468..2704145 1 NC_009617.1 hypothetical protein 2704145 5293545 Cbei_2341 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309457.1 2703468 D 290402 CDS YP_001309458.1 150017204 5293546 complement(2704292..2705722) 1 NC_009617.1 catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 2705722 aspA 5293546 aspA Clostridium beijerinckii NCIMB 8052 aspartate ammonia-lyase YP_001309458.1 2704292 R 290402 CDS YP_001309459.1 150017205 5293547 2706424..2706876 1 NC_009617.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: lbu:LBUL_0439 transcriptional regulator; AsnC family transcriptional regulator 2706876 5293547 Cbei_2343 Clostridium beijerinckii NCIMB 8052 AsnC family transcriptional regulator YP_001309459.1 2706424 D 290402 CDS YP_001309460.1 150017206 5293548 2707073..2707303 1 NC_009617.1 hypothetical protein 2707303 5293548 Cbei_2344 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309460.1 2707073 D 290402 CDS YP_001309461.1 150017207 5293549 2709196..2709402 1 NC_009617.1 PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: sth:STH1431 small acid-soluble spore protein; small acid-soluble spore protein, alpha/beta type 2709402 5293549 Cbei_2345 Clostridium beijerinckii NCIMB 8052 small acid-soluble spore protein, alpha/beta type YP_001309461.1 2709196 D 290402 CDS YP_001309462.1 150017208 5293550 2709672..2709833 1 NC_009617.1 hypothetical protein 2709833 5293550 Cbei_2346 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309462.1 2709672 D 290402 CDS YP_001309463.1 150017209 5293551 2709984..2710214 1 NC_009617.1 hypothetical protein 2710214 5293551 Cbei_2347 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309463.1 2709984 D 290402 CDS YP_001309464.1 150017210 5293552 2710802..2711308 1 NC_009617.1 hypothetical protein 2711308 5293552 Cbei_2348 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309464.1 2710802 D 290402 CDS YP_001309465.1 150017211 5293553 2711627..2711932 1 NC_009617.1 hypothetical protein 2711932 5293553 Cbei_2349 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309465.1 2711627 D 290402 CDS YP_001309466.1 150017212 5293554 2712567..2713481 1 NC_009617.1 PFAM: polysaccharide deacetylase; KEGG: cpr:CPR_0367 predicted xylanase/chitin deacetilase; polysaccharide deacetylase 2713481 5293554 Cbei_2350 Clostridium beijerinckii NCIMB 8052 polysaccharide deacetylase YP_001309466.1 2712567 D 290402 CDS YP_001309467.1 150017213 5293555 2713694..2713963 1 NC_009617.1 ACT domain-containing protein; hypothetical protein 2713963 5293555 Cbei_2351 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309467.1 2713694 D 290402 CDS YP_001309468.1 150017214 5293556 2713976..2715331 1 NC_009617.1 PFAM: protein of unknown function DUF711; KEGG: lin:lin0538 similar to unknown proteins; hypothetical protein 2715331 5293556 Cbei_2352 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309468.1 2713976 D 290402 CDS YP_001309469.1 150017215 5293557 2715997..2717976 1 NC_009617.1 PFAM: Radical SAM domain protein; Radical SAM N-terminal domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cpe:CPE1196 hypothetical protein; hypothetical protein 2717976 5293557 Cbei_2353 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309469.1 2715997 D 290402 CDS YP_001309470.1 150017216 5293558 2718243..2719154 1 NC_009617.1 PFAM: Auxin Efflux Carrier; KEGG: blo:BL0281 hypothetical protein; auxin efflux carrier 2719154 5293558 Cbei_2354 Clostridium beijerinckii NCIMB 8052 auxin efflux carrier YP_001309470.1 2718243 D 290402 CDS YP_001309471.1 150017217 5293559 2719410..2720174 1 NC_009617.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cth:Cthe_0458 exodeoxyribonuclease III Xth; exodeoxyribonuclease III Xth 2720174 5293559 Cbei_2355 Clostridium beijerinckii NCIMB 8052 exodeoxyribonuclease III Xth YP_001309471.1 2719410 D 290402 CDS YP_001309472.1 150017218 5293560 complement(2720236..2720913) 1 NC_009617.1 PFAM: protein of unknown function DUF624; KEGG: rle:pRL120660 transmembrane protein; hypothetical protein 2720913 5293560 Cbei_2356 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309472.1 2720236 R 290402 CDS YP_001309473.1 150017219 5293561 2721474..2722820 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 1; KEGG: bha:BH0905 L-arabinose transport system substrate-binding protein; extracellular solute-binding protein 2722820 5293561 Cbei_2357 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001309473.1 2721474 D 290402 CDS YP_001309474.1 150017220 5293562 2722917..2723807 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bld:BLi03023 L-arabinose transport (integral membrane protein); RBL00917; binding-protein-dependent transport system inner membrane protein 2723807 5293562 Cbei_2358 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001309474.1 2722917 D 290402 CDS YP_001309475.1 150017221 5293563 2723809..2724699 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BG11912 L-arabinose transport system permease; monosaccharide-transporting ATPase 2724699 5293563 Cbei_2359 Clostridium beijerinckii NCIMB 8052 monosaccharide-transporting ATPase YP_001309475.1 2723809 D 290402 CDS YP_001309476.1 150017222 5293564 2724763..2726280 1 NC_009617.1 PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: cth:Cthe_2548 alpha-N-arabinofuranosidase; alpha-N-arabinofuranosidase 2726280 5293564 Cbei_2360 Clostridium beijerinckii NCIMB 8052 alpha-N-arabinofuranosidase YP_001309476.1 2724763 D 290402 CDS YP_001309477.1 150017223 5293565 complement(2726387..2727310) 1 NC_009617.1 PFAM: ArsR family transcriptional regulator; Helix-turn-helix, type 11 domain protein; KEGG: bha:BH1869 hypothetical protein; ArsR family transcriptional regulator 2727310 5293565 Cbei_2361 Clostridium beijerinckii NCIMB 8052 ArsR family transcriptional regulator YP_001309477.1 2726387 R 290402 CDS YP_001309478.1 150017224 5293566 complement(2727513..2728409) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: bcl:ABC1211 transcriptional regulator, AraC/XylS family; helix-turn-helix domain-containing protein 2728409 5293566 Cbei_2362 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001309478.1 2727513 R 290402 CDS YP_001309479.1 150017225 5293567 2728599..2730551 1 NC_009617.1 PFAM: protein of unknown function DUF1680; KEGG: bcl:ABC1212 hypothetical protein; hypothetical protein 2730551 5293567 Cbei_2363 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309479.1 2728599 D 290402 CDS YP_001309480.1 150017226 5293568 2730663..2731835 1 NC_009617.1 PFAM: 3-dehydroquinate synthase; KEGG: bha:BH1862 L-arabinose utilization protein; glycerol-1-phosphate dehydrogenase 2731835 5293568 Cbei_2364 Clostridium beijerinckii NCIMB 8052 glycerol-1-phosphate dehydrogenase YP_001309480.1 2730663 D 290402 CDS YP_001309481.1 150017227 5293569 2731840..2732631 1 NC_009617.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: fnu:FN1255 nagD protein; HAD family hydrolase 2732631 5293569 Cbei_2365 Clostridium beijerinckii NCIMB 8052 HAD family hydrolase YP_001309481.1 2731840 D 290402 CDS YP_001309482.1 150017228 5293570 2733071..2733673 1 NC_009617.1 PFAM: NUDIX hydrolase; KEGG: cpf:CPF_0882 pyrophosphatase, MutT/NUDIX family; NUDIX hydrolase 2733673 5293570 Cbei_2366 Clostridium beijerinckii NCIMB 8052 NUDIX hydrolase YP_001309482.1 2733071 D 290402 CDS YP_001309483.1 150017229 5293571 2734373..2735074 1 NC_009617.1 TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase; KEGG: bat:BAS2602 ribose 5-phosphate isomerase; ribose 5-phosphate isomerase 2735074 5293571 Cbei_2367 Clostridium beijerinckii NCIMB 8052 ribose 5-phosphate isomerase YP_001309483.1 2734373 D 290402 CDS YP_001309484.1 150017230 5293572 2735116..2735550 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mba:Mbar_A3286 acetyltransferase, GNAT family; N-acetyltransferase GCN5 2735550 5293572 Cbei_2368 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001309484.1 2735116 D 290402 CDS YP_001309485.1 150017231 5293573 2735586..2736443 1 NC_009617.1 SMART: ATPase AAA; KEGG: dsy:DSY3658 hypothetical protein; ATPase AAA 2736443 5293573 Cbei_2369 Clostridium beijerinckii NCIMB 8052 ATPase AAA YP_001309485.1 2735586 D 290402 CDS YP_001309486.1 150017232 5293574 2736514..2736690 1 NC_009617.1 KEGG: cac:CAC0369 predicted acetyltransferase; acetyltransferase 2736690 5293574 Cbei_2370 Clostridium beijerinckii NCIMB 8052 acetyltransferase YP_001309486.1 2736514 D 290402 CDS YP_001309487.1 150017233 5293575 2737005..2737556 1 NC_009617.1 hypothetical protein 2737556 5293575 Cbei_2371 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309487.1 2737005 D 290402 CDS YP_001309488.1 150017234 5293576 complement(2737809..2738174) 1 NC_009617.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: hhe:HH1468 4-carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 2738174 5293576 Cbei_2372 Clostridium beijerinckii NCIMB 8052 carboxymuconolactone decarboxylase YP_001309488.1 2737809 R 290402 CDS YP_001309489.1 150017235 5293577 2738254..2738616 1 NC_009617.1 PFAM: regulatory protein, MerR; KEGG: lin:lin0806 hypothetical protein; MerR family transcriptional regulator 2738616 5293577 Cbei_2373 Clostridium beijerinckii NCIMB 8052 MerR family transcriptional regulator YP_001309489.1 2738254 D 290402 CDS YP_001309490.1 150017236 5293578 2738669..2739253 1 NC_009617.1 KEGG: cac:CAC0722 predicted membrane protein; CF-9 family; CF-9 family membrane protein 2739253 5293578 Cbei_2374 Clostridium beijerinckii NCIMB 8052 CF-9 family membrane protein YP_001309490.1 2738669 D 290402 CDS YP_001309491.1 150017237 5293579 complement(2739234..2739647) 1 NC_009617.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: bsu:BG12123 transcriptional regulator (Lrp family); AsnC family transcriptional regulator 2739647 5293579 Cbei_2375 Clostridium beijerinckii NCIMB 8052 AsnC family transcriptional regulator YP_001309491.1 2739234 R 290402 CDS YP_001309492.1 150017238 5293580 2739773..2740318 1 NC_009617.1 PFAM: isochorismatase hydrolase; KEGG: gsu:GSU0569 isochorismatase family protein; isochorismatase hydrolase 2740318 5293580 Cbei_2376 Clostridium beijerinckii NCIMB 8052 isochorismatase hydrolase YP_001309492.1 2739773 D 290402 CDS YP_001309493.1 150017239 5293581 2740798..2741778 1 NC_009617.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bha:BH3840 sugar ABC transporter (sugar-binding protein); periplasmic binding protein/LacI transcriptional regulator 2741778 5293581 Cbei_2377 Clostridium beijerinckii NCIMB 8052 periplasmic binding protein/LacI transcriptional regulator YP_001309493.1 2740798 D 290402 CDS YP_001309494.1 150017240 5293582 2741891..2743264 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase internal region; KEGG: tte:TTE0287 predicted ATPase; signal transduction histidine kinase LytS 2743264 5293582 Cbei_2378 Clostridium beijerinckii NCIMB 8052 signal transduction histidine kinase LytS YP_001309494.1 2741891 D 290402 CDS YP_001309495.1 150017241 5293583 2743242..2744582 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: tte:TTE0288 CheY-like receiver domains; response regulator receiver protein 2744582 5293583 Cbei_2379 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001309495.1 2743242 D 290402 CDS YP_001309496.1 150017242 5293584 2744876..2745955 1 NC_009617.1 TIGRFAM: D-xylose ABC transporter periplasmic protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: mta:Moth_2022 periplasmic binding protein/LacI transcriptional regulator; D-xylose ABC transporter periplasmic protein 2745955 5293584 Cbei_2380 Clostridium beijerinckii NCIMB 8052 D-xylose ABC transporter periplasmic protein YP_001309496.1 2744876 D 290402 CDS YP_001309497.1 150017243 5293585 2746020..2747597 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ecv:APECO1_2882 ABC-type xylose transport system, ATPase component XylG; sugar ABC transporter ATPase 2747597 5293585 Cbei_2381 Clostridium beijerinckii NCIMB 8052 sugar ABC transporter ATPase YP_001309497.1 2746020 D 290402 CDS YP_001309498.1 150017244 5293586 2747599..2748768 1 NC_009617.1 PFAM: inner-membrane translocator; KEGG: mta:Moth_2020 inner-membrane translocator; monosaccharide-transporting ATPase 2748768 5293586 Cbei_2382 Clostridium beijerinckii NCIMB 8052 monosaccharide-transporting ATPase YP_001309498.1 2747599 D 290402 CDS YP_001309499.1 150017245 5293587 2749301..2750626 1 NC_009617.1 TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bca:BCE_2210 xylose isomerase; xylose isomerase 2750626 5293587 Cbei_2383 Clostridium beijerinckii NCIMB 8052 xylose isomerase YP_001309499.1 2749301 D 290402 CDS YP_001309500.1 150017246 5293588 2751087..2752589 1 NC_009617.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: cac:CAC2612 xylulose kinase; xylulokinase 2752589 5293588 Cbei_2384 Clostridium beijerinckii NCIMB 8052 xylulokinase YP_001309500.1 2751087 D 290402 CDS YP_001309501.1 150017247 5293589 2752779..2753927 1 NC_009617.1 PFAM: ROK family protein; KEGG: cac:CAC3673 XylR transcriptional regulator; ROK family protein 2753927 5293589 Cbei_2385 Clostridium beijerinckii NCIMB 8052 ROK family protein YP_001309501.1 2752779 D 290402 CDS YP_001309502.1 150017248 5293590 2754275..2754922 1 NC_009617.1 TIGRFAM: transaldolase; PFAM: Transaldolase; KEGG: lwe:lwe2691 transaldolase; transaldolase 2754922 5293590 Cbei_2386 Clostridium beijerinckii NCIMB 8052 transaldolase YP_001309502.1 2754275 D 290402 CDS YP_001309503.1 150017249 5293591 2755573..2757564 1 NC_009617.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; KEGG: cac:CAC1348 transketolase, TKT; transketolase 2757564 5293591 Cbei_2387 Clostridium beijerinckii NCIMB 8052 transketolase YP_001309503.1 2755573 D 290402 CDS YP_001309504.1 150017250 5293592 2757892..2758515 1 NC_009617.1 KEGG: cac:CAC2611 hypothetical protein; hypothetical protein 2758515 5293592 Cbei_2388 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309504.1 2757892 D 290402 CDS YP_001309505.1 150017251 5293593 2758809..2760281 1 NC_009617.1 KEGG: cac:CAC2610 L-fucose isomerase related protein; L-fucose isomerase-like protein 2760281 5293593 Cbei_2389 Clostridium beijerinckii NCIMB 8052 L-fucose isomerase-like protein YP_001309505.1 2758809 D 290402 CDS YP_001309506.1 150017252 5293594 2760938..2761606 1 NC_009617.1 PFAM: GntR family transcriptional regulator; GntR domain protein; Helix-turn-helix, type 11 domain protein; KEGG: mta:Moth_0073 transcriptional regulator, GntR family; GntR family transcriptional regulator 2761606 5293594 Cbei_2390 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001309506.1 2760938 D 290402 CDS YP_001309507.1 150017253 5293595 2761774..2762559 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; KEGG: cac:CAC0111 glutamine-binding periplasmic protein fused to glutamine permease; extracellular solute-binding protein 2762559 5293595 Cbei_2391 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001309507.1 2761774 D 290402 CDS YP_001309508.1 150017254 5293597 2764482..2765210 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC0112 glutamine ABC transporter (ATP-binding protein); ABC transporter 2765210 5293597 Cbei_2394 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001309508.1 2764482 D 290402 CDS YP_001309509.1 150017255 5293598 2765468..2766478 1 NC_009617.1 TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase; KEGG: hhe:HH0662 L-asparaginase; type II L-asparaginase 2766478 5293598 Cbei_2395 Clostridium beijerinckii NCIMB 8052 type II L-asparaginase YP_001309509.1 2765468 D 290402 CDS YP_001309510.1 150017256 5293599 2767396..2768328 1 NC_009617.1 KEGG: ctc:CTC01798 hypothetical protein; hypothetical protein 2768328 5293599 Cbei_2396 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309510.1 2767396 D 290402 CDS YP_001309511.1 150017257 5293600 2768360..2769295 1 NC_009617.1 PFAM: peptidase M19, renal dipeptidase; KEGG: cpf:CPF_2183 dipeptidase family protein; membrane dipeptidase 2769295 5293600 Cbei_2397 Clostridium beijerinckii NCIMB 8052 membrane dipeptidase YP_001309511.1 2768360 D 290402 CDS YP_001309512.1 150017258 5293601 2769531..2770274 1 NC_009617.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 2770274 fabG 5293601 fabG Clostridium beijerinckii NCIMB 8052 3-ketoacyl-ACP reductase YP_001309512.1 2769531 D 290402 CDS YP_001309513.1 150017259 5293602 complement(2770286..2771806) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cpr:CPR_1892 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 2771806 5293602 Cbei_2399 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001309513.1 2770286 R 290402 CDS YP_001309514.1 150017260 5293603 complement(2771807..2772478) 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cpf:CPF_2180 DNA-binding response regulator; two component transcriptional regulator 2772478 5293603 Cbei_2400 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001309514.1 2771807 R 290402 CDS YP_001309515.1 150017261 5293604 2773176..2774417 1 NC_009617.1 PFAM: peptidase M16 domain protein; KEGG: cno:NT01CX_1702 peptidase, M16 family; peptidase M16 domain-containing protein 2774417 5293604 Cbei_2401 Clostridium beijerinckii NCIMB 8052 peptidase M16 domain-containing protein YP_001309515.1 2773176 D 290402 CDS YP_001309516.1 150017262 5293605 2774453..2775094 1 NC_009617.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 2775094 recX 5293605 recX Clostridium beijerinckii NCIMB 8052 recombination regulator RecX YP_001309516.1 2774453 D 290402 CDS YP_001309517.1 150017263 5293606 2775233..2775952 1 NC_009617.1 PFAM: transglutaminase domain protein; KEGG: cac:CAC2409 transglutaminase-like enzyme, cysteine protease; transglutaminase domain-containing protein 2775952 5293606 Cbei_2403 Clostridium beijerinckii NCIMB 8052 transglutaminase domain-containing protein YP_001309517.1 2775233 D 290402 CDS YP_001309518.1 150017264 5293607 complement(2775954..2776310) 1 NC_009617.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: ctc:CTC02335 hypothetical protein; hypothetical protein 2776310 5293607 Cbei_2404 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309518.1 2775954 R 290402 CDS YP_001309519.1 150017265 5293608 2776527..2780840 1 NC_009617.1 TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: cth:Cthe_1329 CoA-substrate-specific enzyme activase; CoA-substrate-specific enzyme activase 2780840 5293608 Cbei_2405 Clostridium beijerinckii NCIMB 8052 CoA-substrate-specific enzyme activase YP_001309519.1 2776527 D 290402 CDS YP_001309520.1 150017266 5293609 2781068..2782108 1 NC_009617.1 KEGG: ctc:CTC00791 hypothetical protein; hypothetical protein 2782108 5293609 Cbei_2406 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309520.1 2781068 D 290402 CDS YP_001309521.1 150017267 5293610 2782201..2783268 1 NC_009617.1 KEGG: ctc:CTC00792 hypothetical protein; hypothetical protein 2783268 5293610 Cbei_2407 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309521.1 2782201 D 290402 CDS YP_001309522.1 150017268 5293611 2783461..2784231 1 NC_009617.1 hypothetical protein 2784231 5293611 Cbei_2408 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309522.1 2783461 D 290402 CDS YP_001309523.1 150017269 5293612 2784308..2785168 1 NC_009617.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: cpr:CPR_1317 hypothetical protein; hypothetical protein 2785168 5293612 Cbei_2409 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309523.1 2784308 D 290402 CDS YP_001309524.1 150017270 5293613 2785312..2785728 1 NC_009617.1 TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: cac:CAC0587 flavodoxin; flavodoxin 2785728 5293613 Cbei_2410 Clostridium beijerinckii NCIMB 8052 flavodoxin YP_001309524.1 2785312 D 290402 CDS YP_001309525.1 150017271 5293614 2785751..2786386 1 NC_009617.1 KEGG: cpr:CPR_0610 hypothetical protein; hypothetical protein 2786386 5293614 Cbei_2411 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309525.1 2785751 D 290402 CDS YP_001309526.1 150017272 5293615 2786979..2787518 1 NC_009617.1 PFAM: NUDIX hydrolase; KEGG: cpf:CPF_0794 hydrolase, NUDIX family; NUDIX hydrolase 2787518 5293615 Cbei_2412 Clostridium beijerinckii NCIMB 8052 NUDIX hydrolase YP_001309526.1 2786979 D 290402 CDS YP_001309527.1 150017273 5293616 2788138..2789481 1 NC_009617.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cac:CAC1611 probable cation efflux pump (multidrug resistance protein); MATE efflux family protein 2789481 5293616 Cbei_2413 Clostridium beijerinckii NCIMB 8052 MATE efflux family protein YP_001309527.1 2788138 D 290402 CDS YP_001309528.1 150017274 5293617 2789810..2790772 1 NC_009617.1 PFAM: UV-endonuclease UvdE; KEGG: cth:Cthe_1958 UV-endonuclease UvdE; UV damage endonuclease 2790772 uvsE 5293617 uvsE Clostridium beijerinckii NCIMB 8052 UV damage endonuclease YP_001309528.1 2789810 D 290402 CDS YP_001309529.1 150017275 5293618 2791002..2792027 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; SMART: transglutaminase domain protein; KEGG: bca:BCE_1072 S-layer protein; cell wall binding repeat-containing protein 2792027 5293618 Cbei_2415 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001309529.1 2791002 D 290402 CDS YP_001309530.1 150017276 5293619 2792506..2793717 1 NC_009617.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 2793717 5293619 Cbei_2416 Clostridium beijerinckii NCIMB 8052 tyrosyl-tRNA synthetase YP_001309530.1 2792506 D 290402 CDS YP_001309531.1 150017277 5293620 complement(2793816..2794997) 1 NC_009617.1 PFAM: protein of unknown function UPF0118; KEGG: cpr:CPR_0707 probable permease; hypothetical protein 2794997 5293620 Cbei_2417 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309531.1 2793816 R 290402 CDS YP_001309532.1 150017278 5293621 complement(2795099..2796607) 1 NC_009617.1 PFAM: Ppx/GppA phosphatase; KEGG: cac:CAC0621 exopolyphosphatase; Ppx/GppA phosphatase 2796607 5293621 Cbei_2418 Clostridium beijerinckii NCIMB 8052 Ppx/GppA phosphatase YP_001309532.1 2795099 R 290402 CDS YP_001309533.1 150017279 5293622 2796811..2798859 1 NC_009617.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 2798859 5293622 Cbei_2419 Clostridium beijerinckii NCIMB 8052 polyphosphate kinase YP_001309533.1 2796811 D 290402 CDS YP_001309534.1 150017280 5293623 2799084..2799653 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: cpe:CPE0570 hypothetical protein; cell wall binding repeat-containing protein 2799653 5293623 Cbei_2420 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001309534.1 2799084 D 290402 CDS YP_001309535.1 150017281 5293624 2800166..2801329 1 NC_009617.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: ctc:CTC00408 NADH-dependent butanol dehydrogenase A; iron-containing alcohol dehydrogenase 2801329 5293624 Cbei_2421 Clostridium beijerinckii NCIMB 8052 iron-containing alcohol dehydrogenase YP_001309535.1 2800166 D 290402 CDS YP_001309536.1 150017282 5293625 2801478..2802335 1 NC_009617.1 PFAM: peptidase U61, LD-carboxypeptidase A; KEGG: cpe:CPE2462 probable microcin immunity protein; peptidase U61, LD-carboxypeptidase A 2802335 5293625 Cbei_2422 Clostridium beijerinckii NCIMB 8052 peptidase U61, LD-carboxypeptidase A YP_001309536.1 2801478 D 290402 CDS YP_001309537.1 150017283 5293626 2802471..2803940 1 NC_009617.1 KEGG: tde:TDE2076 hypothetical protein; hypothetical protein 2803940 5293626 Cbei_2423 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309537.1 2802471 D 290402 CDS YP_001309538.1 150017284 5293627 2804000..2806969 1 NC_009617.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; KEGG: tde:TDE2075 GGDEF domain/EAL domain protein; diguanylate cyclase/phosphodiesterase 2806969 5293627 Cbei_2424 Clostridium beijerinckii NCIMB 8052 diguanylate cyclase/phosphodiesterase YP_001309538.1 2804000 D 290402 CDS YP_001309539.1 150017285 5293628 2807001..2808734 1 NC_009617.1 PFAM: protein of unknown function DUF342; KEGG: cac:CAC2225 hypothetical protein; hypothetical protein 2808734 5293628 Cbei_2425 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309539.1 2807001 D 290402 CDS YP_001309540.1 150017286 5293629 2809129..2810481 1 NC_009617.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: cpr:CPR_0384 xanthine permease; uracil-xanthine permease 2810481 5293629 Cbei_2426 Clostridium beijerinckii NCIMB 8052 uracil-xanthine permease YP_001309540.1 2809129 D 290402 CDS YP_001309541.1 150017287 5293630 2810483..2811055 1 NC_009617.1 Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase 2811055 5293630 Cbei_2427 Clostridium beijerinckii NCIMB 8052 xanthine phosphoribosyltransferase YP_001309541.1 2810483 D 290402 CDS YP_001309542.1 150017288 5293631 2811480..2812700 1 NC_009617.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 2812700 5293631 Cbei_2428 Clostridium beijerinckii NCIMB 8052 peptidase T YP_001309542.1 2811480 D 290402 CDS YP_001309543.1 150017289 5293632 complement(2813317..2813574) 1 NC_009617.1 hypothetical protein 2813574 5293632 Cbei_2429 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309543.1 2813317 R 290402 CDS YP_001309544.1 150017290 5293633 2813821..2815578 1 NC_009617.1 PFAM: helicase domain protein; KEGG: cac:CAC0778 ATP-dependent RNA helicase, superfamily II; helicase domain-containing protein 2815578 5293633 Cbei_2430 Clostridium beijerinckii NCIMB 8052 helicase domain-containing protein YP_001309544.1 2813821 D 290402 CDS YP_001309545.1 150017291 5293634 2815832..2816527 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY3619 hypothetical protein; ABC transporter 2816527 5293634 Cbei_2431 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001309545.1 2815832 D 290402 CDS YP_001309546.1 150017292 5293635 2816854..2817945 1 NC_009617.1 Catalyzes the formation of PRPP from ATP and ribose 5-phosphate; phosphoribosylpyrophosphate synthetase 2817945 5293635 Cbei_2432 Clostridium beijerinckii NCIMB 8052 phosphoribosylpyrophosphate synthetase YP_001309546.1 2816854 D 290402 CDS YP_001309547.1 150017293 5293636 complement(2818099..2818368) 1 NC_009617.1 hypothetical protein 2818368 5293636 Cbei_2433 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309547.1 2818099 R 290402 CDS YP_001309548.1 150017294 5293637 2818946..2819941 1 NC_009617.1 PFAM: NLP/P60 protein; KEGG: ctc:CTC00227 cell wall-associated hydrolase; NLP/P60 protein 2819941 5293637 Cbei_2434 Clostridium beijerinckii NCIMB 8052 NLP/P60 protein YP_001309548.1 2818946 D 290402 CDS YP_001309549.1 150017295 5293638 complement(2820017..2821894) 1 NC_009617.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cac:CAC0903 sensory transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase 2821894 5293638 Cbei_2435 Clostridium beijerinckii NCIMB 8052 PAS/PAC sensor signal transduction histidine kinase YP_001309549.1 2820017 R 290402 CDS YP_001309550.1 150017296 5293639 2822347..2823249 1 NC_009617.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cac:CAC0749 HD hydrolase superfamily protein; metal dependent phosphohydrolase 2823249 5293639 Cbei_2436 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001309550.1 2822347 D 290402 CDS YP_001309551.1 150017297 5293640 2823276..2823563 1 NC_009617.1 PFAM: protein of unknown function DUF503; KEGG: cac:CAC0740 uncharacterized conserved protein, YlxP family; hypothetical protein 2823563 5293640 Cbei_2437 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309551.1 2823276 D 290402 CDS YP_001309552.1 150017298 5293641 complement(2823750..2824778) 1 NC_009617.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 2824778 5293641 Cbei_2438 Clostridium beijerinckii NCIMB 8052 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001309552.1 2823750 R 290402 CDS YP_001309553.1 150017299 5293642 2825168..2826145 1 NC_009617.1 PFAM: cytochrome b5; KEGG: bur:Bcep18194_A5862 hypothetical protein; cytochrome b5 2826145 5293642 Cbei_2439 Clostridium beijerinckii NCIMB 8052 cytochrome b5 YP_001309553.1 2825168 D 290402 CDS YP_001309554.1 150017300 5293643 complement(2826446..2826991) 1 NC_009617.1 KEGG: bcl:ABC3324 hypothetical protein; hypothetical protein 2826991 5293643 Cbei_2440 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309554.1 2826446 R 290402 CDS YP_001309555.1 150017301 5293644 2827342..2827899 1 NC_009617.1 PFAM: NUDIX hydrolase; KEGG: cpf:CPF_0662 hydrolase, NUDIX family; NUDIX hydrolase 2827899 5293644 Cbei_2441 Clostridium beijerinckii NCIMB 8052 NUDIX hydrolase YP_001309555.1 2827342 D 290402 CDS YP_001309556.1 150017302 5293645 2828066..2828593 1 NC_009617.1 PFAM: Phosphoesterase, HXTX; KEGG: cac:CAC1603 diverged enzyme related to 2'-5' RNA ligase, ortholog YJCG B.subtilis; phosphoesterase, HXTX 2828593 5293645 Cbei_2442 Clostridium beijerinckii NCIMB 8052 phosphoesterase, HXTX YP_001309556.1 2828066 D 290402 CDS YP_001309557.1 150017303 5293646 complement(2828699..2829475) 1 NC_009617.1 PFAM: YibE/F family protein; KEGG: cac:CAC0889 hypothetical protein; hypothetical protein 2829475 5293646 Cbei_2443 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309557.1 2828699 R 290402 CDS YP_001309558.1 150017304 5293647 complement(2829480..2830640) 1 NC_009617.1 PFAM: YibE/F family protein; KEGG: cac:CAC0890 uncharacterized conserved membrane protein; hypothetical protein 2830640 5293647 Cbei_2444 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309558.1 2829480 R 290402 CDS YP_001309559.1 150017305 5293648 2830938..2831960 1 NC_009617.1 KEGG: lac:LBA1611 surface protein; hypothetical protein 2831960 5293648 Cbei_2445 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309559.1 2830938 D 290402 CDS YP_001309560.1 150017306 5293649 2832663..2833658 1 NC_009617.1 catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; ornithine carbamoyltransferase 2833658 5293649 Cbei_2446 Clostridium beijerinckii NCIMB 8052 ornithine carbamoyltransferase YP_001309560.1 2832663 D 290402 CDS YP_001309561.1 150017307 5293650 complement(2833789..2834067) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ssp:SSP0387 acetyltransferase; N-acetyltransferase GCN5 2834067 5293650 Cbei_2447 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001309561.1 2833789 R 290402 CDS YP_001309562.1 150017308 5293651 2834693..2835103 1 NC_009617.1 PFAM: Positive regulator of sigma(E), RseC/MucC; KEGG: cno:NT01CX_0096 positive regulator of sigma(E), RseC/MucC superfamily; sigma E positive regulator RseC/MucC 2835103 5293651 Cbei_2448 Clostridium beijerinckii NCIMB 8052 sigma E positive regulator RseC/MucC YP_001309562.1 2834693 D 290402 CDS YP_001309563.1 150017309 5293652 2835283..2836596 1 NC_009617.1 TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: tma:TM0244 electron transport complex protein; RnfABCDGE type electron transport complex subunit C 2836596 5293652 Cbei_2449 Clostridium beijerinckii NCIMB 8052 RnfABCDGE type electron transport complex subunit C YP_001309563.1 2835283 D 290402 CDS YP_001309564.1 150017310 5293653 2836613..2837650 1 NC_009617.1 TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: sat:SYN_01663 sodium-translocating NADH-quinone reductase subunit B; RnfABCDGE type electron transport complex subunit D 2837650 5293653 Cbei_2450 Clostridium beijerinckii NCIMB 8052 RnfABCDGE type electron transport complex subunit D YP_001309564.1 2836613 D 290402 CDS YP_001309565.1 150017311 5293654 2837655..2838221 1 NC_009617.1 TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: cno:NT01CX_1581 RnfG/NqrC; RnfABCDGE type electron transport complex subunit G 2838221 5293654 Cbei_2451 Clostridium beijerinckii NCIMB 8052 RnfABCDGE type electron transport complex subunit G YP_001309565.1 2837655 D 290402 CDS YP_001309566.1 150017312 5293655 2838223..2838846 1 NC_009617.1 PFAM: RnfA-Nqr electron transport subunit; KEGG: pca:Pcar_0260 NADH-ubiquinone oxidoreductase; RnfA-Nqr electron transport subunit 2838846 5293655 Cbei_2452 Clostridium beijerinckii NCIMB 8052 RnfA-Nqr electron transport subunit YP_001309566.1 2838223 D 290402 CDS YP_001309567.1 150017313 5293656 2838846..2839421 1 NC_009617.1 PFAM: RnfA-Nqr electron transport subunit; KEGG: yps:YPTB2167 membrane protein; RnfA-Nqr electron transport subunit 2839421 5293656 Cbei_2453 Clostridium beijerinckii NCIMB 8052 RnfA-Nqr electron transport subunit YP_001309567.1 2838846 D 290402 CDS YP_001309568.1 150017314 5293657 2839440..2840291 1 NC_009617.1 TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: sat:SYN_00628 sodium-translocating NADH-quinone reductase, subunit; RnfABCDGE type electron transport complex subunit B 2840291 5293657 Cbei_2454 Clostridium beijerinckii NCIMB 8052 RnfABCDGE type electron transport complex subunit B YP_001309568.1 2839440 D 290402 CDS YP_001309569.1 150017315 5293658 complement(2840458..2840988) 1 NC_009617.1 PFAM: Heptaprenyl diphosphate synthase component I; KEGG: cpf:CPF_2488 hypothetical protein; heptaprenyl diphosphate synthase component I 2840988 5293658 Cbei_2455 Clostridium beijerinckii NCIMB 8052 heptaprenyl diphosphate synthase component I YP_001309569.1 2840458 R 290402 CDS YP_001309570.1 150017316 5293659 complement(2840981..2841370) 1 NC_009617.1 PFAM: protein of unknown function DUF1312; KEGG: cno:NT01CX_0721 hypothetical protein; hypothetical protein 2841370 5293659 Cbei_2456 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309570.1 2840981 R 290402 CDS YP_001309571.1 150017317 5293660 2841705..2842703 1 NC_009617.1 PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: cac:CAC0693 transcriptional regulator of the LacI family; alanine racemase 2842703 5293660 Cbei_2457 Clostridium beijerinckii NCIMB 8052 alanine racemase YP_001309571.1 2841705 D 290402 CDS YP_001309572.1 150017318 5293661 2842975..2843811 1 NC_009617.1 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase 2843811 5293661 Cbei_2458 Clostridium beijerinckii NCIMB 8052 5-keto-4-deoxyuronate isomerase YP_001309572.1 2842975 D 290402 CDS YP_001309573.1 150017319 5293662 2844290..2845312 1 NC_009617.1 transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease 2845312 5293662 Cbei_2459 Clostridium beijerinckii NCIMB 8052 2-keto-3-deoxygluconate permease YP_001309573.1 2844290 D 290402 CDS YP_001309574.1 150017320 5293663 2845752..2848697 1 NC_009617.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; Cache domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: chy:CHY_1906 sensory box/GGDEF domain/EAL domain protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 2848697 5293663 Cbei_2460 Clostridium beijerinckii NCIMB 8052 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001309574.1 2845752 D 290402 CDS YP_001309575.1 150017321 5293664 2848855..2849304 1 NC_009617.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 2849304 5293664 Cbei_2461 Clostridium beijerinckii NCIMB 8052 methionine sulfoxide reductase B YP_001309575.1 2848855 D 290402 CDS YP_001309576.1 150017322 5293665 complement(2849421..2850386) 1 NC_009617.1 PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: bce:BC2482 hypothetical cytosolic protein; hypothetical protein 2850386 5293665 Cbei_2462 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309576.1 2849421 R 290402 CDS YP_001309577.1 150017323 5293666 2850610..2851713 1 NC_009617.1 PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: ctc:CTC00941 cobalamin synthesis protein CobW; cobalamin synthesis protein, P47K 2851713 5293666 Cbei_2463 Clostridium beijerinckii NCIMB 8052 cobalamin synthesis protein, P47K YP_001309577.1 2850610 D 290402 CDS YP_001309578.1 150017324 5293667 2852647..2853585 1 NC_009617.1 KEGG: cpr:CPR_0043 hypothetical protein; G3E family GTPase-like protein 2853585 5293667 Cbei_2464 Clostridium beijerinckii NCIMB 8052 G3E family GTPase-like protein YP_001309578.1 2852647 D 290402 CDS YP_001309579.1 150017325 5293668 complement(2853694..2854533) 1 NC_009617.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: cpe:CPE0820 conserved hypothetical protein; HAD family hydrolase 2854533 5293668 Cbei_2465 Clostridium beijerinckii NCIMB 8052 HAD family hydrolase YP_001309579.1 2853694 R 290402 CDS YP_001309580.1 150017326 5293669 2854781..2855530 1 NC_009617.1 PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: oih:OB2808 transcriptional repressor of phosphotransferase system; DeoR family transcriptional regulator 2855530 5293669 Cbei_2466 Clostridium beijerinckii NCIMB 8052 DeoR family transcriptional regulator YP_001309580.1 2854781 D 290402 CDS YP_001309581.1 150017327 5293670 complement(2855584..2857575) 1 NC_009617.1 PFAM: fructose-1,6-bisphosphatase; KEGG: cac:CAC1572 fructose-1,6-bisphosphatase; fructose-1,6-bisphosphatase 2857575 5293670 Cbei_2467 Clostridium beijerinckii NCIMB 8052 fructose-1,6-bisphosphatase YP_001309581.1 2855584 R 290402 CDS YP_001309582.1 150017328 5293671 complement(2857711..2859891) 1 NC_009617.1 TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: ter:Tery_5016 glycogen debranching enzyme GlgX; glycogen debranching protein GlgX 2859891 5293671 Cbei_2468 Clostridium beijerinckii NCIMB 8052 glycogen debranching protein GlgX YP_001309582.1 2857711 R 290402 CDS YP_001309583.1 150017329 5293672 2860241..2861299 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: cpe:CPE0626 hypothetical protein; cell wall binding repeat-containing protein 2861299 5293672 Cbei_2469 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001309583.1 2860241 D 290402 CDS YP_001309584.1 150017330 5293673 complement(2861505..2861711) 1 NC_009617.1 PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: cac:CAC1522 small acid-soluble spore protein; small acid-soluble spore protein, alpha/beta type 2861711 5293673 Cbei_2470 Clostridium beijerinckii NCIMB 8052 small acid-soluble spore protein, alpha/beta type YP_001309584.1 2861505 R 290402 CDS YP_001309585.1 150017331 5293674 2861925..2862119 1 NC_009617.1 PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: cac:CAC2365 small acid-soluble spore protein; small acid-soluble spore protein, alpha/beta type 2862119 5293674 Cbei_2471 Clostridium beijerinckii NCIMB 8052 small acid-soluble spore protein, alpha/beta type YP_001309585.1 2861925 D 290402 CDS YP_001309586.1 150017332 5296376 complement(2863543..2864577) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: bce:BC1957 two component system histidine kinase; integral membrane sensor signal transduction histidine kinase 2864577 5296376 Cbei_2473 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001309586.1 2863543 R 290402 CDS YP_001309587.1 150017333 5293676 complement(2864570..2865247) 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: lme:LEUM_0956 DNA-binding response regulator, OmpR family (Rec-wHTH domains); two component transcriptional regulator 2865247 5293676 Cbei_2474 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001309587.1 2864570 R 290402 CDS YP_001309588.1 150017334 5293677 2865706..2866320 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: rha:RHA1_ro05404 transcriptional regulator, TetR family; TetR family transcriptional regulator 2866320 5293677 Cbei_2475 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001309588.1 2865706 D 290402 CDS YP_001309589.1 150017335 5293678 2866380..2867675 1 NC_009617.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aba:Acid345_0308 secretion protein HlyD; RND family efflux transporter MFP subunit 2867675 5293678 Cbei_2476 Clostridium beijerinckii NCIMB 8052 RND family efflux transporter MFP subunit YP_001309589.1 2866380 D 290402 CDS YP_001309590.1 150017336 5293679 2867688..2870777 1 NC_009617.1 PFAM: acriflavin resistance protein; KEGG: sfu:Sfum_0763 acriflavin resistance protein; acriflavin resistance protein 2870777 5293679 Cbei_2477 Clostridium beijerinckii NCIMB 8052 acriflavin resistance protein YP_001309590.1 2867688 D 290402 CDS YP_001309591.1 150017337 5293680 2871011..2872291 1 NC_009617.1 KEGG: cth:Cthe_1764 outer membrane protein-like protein; hypothetical protein 2872291 5293680 Cbei_2478 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309591.1 2871011 D 290402 CDS YP_001309592.1 150017338 5293681 2872581..2873186 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: mst:Msp_0717 predicted transcriptional regulator; TetR family transcriptional regulator 2873186 5293681 Cbei_2479 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001309592.1 2872581 D 290402 CDS YP_001309593.1 150017339 5293682 complement(2873253..2873642) 1 NC_009617.1 KEGG: cno:NT01CX_1041 hypothetical protein; hypothetical protein 2873642 5293682 Cbei_2480 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309593.1 2873253 R 290402 CDS YP_001309594.1 150017340 5293683 2874637..2876097 1 NC_009617.1 PFAM: glycoside hydrolase, family 25; cell wall binding repeat-containing protein; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; glycoside hydrolase 2876097 5293683 Cbei_2481 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001309594.1 2874637 D 290402 CDS YP_001309595.1 150017341 5293684 2876512..2877213 1 NC_009617.1 hypothetical protein 2877213 5293684 Cbei_2482 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309595.1 2876512 D 290402 CDS YP_001309596.1 150017342 5293685 2877413..2878666 1 NC_009617.1 KEGG: btl:BALH_1746 hypothetical protein; hypothetical protein 2878666 5293685 Cbei_2483 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309596.1 2877413 D 290402 CDS YP_001309597.1 150017343 5293686 2878678..2879337 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: btk:BT9727_1806 alkaline phosphatase synthesis response regulator; two component transcriptional regulator 2879337 5293686 Cbei_2484 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001309597.1 2878678 D 290402 CDS YP_001309598.1 150017344 5293687 2879342..2880733 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: bcz:BCZK1790 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 2880733 5293687 Cbei_2485 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001309598.1 2879342 D 290402 CDS YP_001309599.1 150017345 5293688 2881030..2881827 1 NC_009617.1 PFAM: ribonuclease H; KEGG: hdu:HD1206 ribonuclease H; ribonuclease H 2881827 5293688 Cbei_2486 Clostridium beijerinckii NCIMB 8052 ribonuclease H YP_001309599.1 2881030 D 290402 CDS YP_001309600.1 150017346 5293689 2882021..2883832 1 NC_009617.1 PFAM: SEC-C motif domain protein; KEGG: sto:ST1780 hypothetical protein; SecC motif-containing protein 2883832 5293689 Cbei_2487 Clostridium beijerinckii NCIMB 8052 SecC motif-containing protein YP_001309600.1 2882021 D 290402 CDS YP_001309601.1 150017347 5293690 2884085..2884405 1 NC_009617.1 KEGG: eci:UTI89_C4721 hypothetical protein; hypothetical protein 2884405 5293690 Cbei_2488 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309601.1 2884085 D 290402 CDS YP_001309602.1 150017348 5293691 2884426..2885343 1 NC_009617.1 PFAM: protein of unknown function DUF523; KEGG: bld:BLi00192 YbbK; hypothetical protein 2885343 5293691 Cbei_2489 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309602.1 2884426 D 290402 CDS YP_001309603.1 150017349 5293692 2885495..2886037 1 NC_009617.1 PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: cpr:CPR_0682 rubredoxin/rubrerythrin; rubrerythrin 2886037 5293692 Cbei_2490 Clostridium beijerinckii NCIMB 8052 rubrerythrin YP_001309603.1 2885495 D 290402 CDS YP_001309604.1 150017350 5293693 2886555..2888909 1 NC_009617.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein; KEGG: cno:NT01CX_2348 sensory box/GGDEF family protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 2888909 5293693 Cbei_2491 Clostridium beijerinckii NCIMB 8052 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001309604.1 2886555 D 290402 CDS YP_001309605.1 150017351 5293694 2889051..2889812 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mla:Mlab_0278 hypothetical protein; 4Fe-4S ferredoxin 2889812 5293694 Cbei_2492 Clostridium beijerinckii NCIMB 8052 4Fe-4S ferredoxin YP_001309605.1 2889051 D 290402 CDS YP_001309606.1 150017352 5296377 2890410..2891477 1 NC_009617.1 KEGG: fnu:FN1165 D-galactose-binding protein; D-galactose-binding protein 2891477 5296377 Cbei_2494 Clostridium beijerinckii NCIMB 8052 D-galactose-binding protein YP_001309606.1 2890410 D 290402 CDS YP_001309607.1 150017353 5293696 complement(2891609..2892883) 1 NC_009617.1 KEGG: cac:CAC0769 hypothetical protein; hypothetical protein 2892883 5293696 Cbei_2495 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309607.1 2891609 R 290402 CDS YP_001309608.1 150017354 5293697 2893180..2893788 1 NC_009617.1 PFAM: CutC family protein; KEGG: cpf:CPF_0254 CutC family protein; CutC family protein 2893788 5293697 Cbei_2496 Clostridium beijerinckii NCIMB 8052 CutC family protein YP_001309608.1 2893180 D 290402 CDS YP_001309609.1 150017355 5293698 2894085..2897072 1 NC_009617.1 PFAM: sigma-54 factor, interaction domain-containing protein; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PTS system fructose subfamily IIA component; PRD domain protein; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; KEGG: tte:TTE0180 NtrC family transcriptional regulator, ATPase domain; sigma-54 factor interaction domain-containing protein 2897072 5293698 Cbei_2497 Clostridium beijerinckii NCIMB 8052 sigma-54 factor interaction domain-containing protein YP_001309609.1 2894085 D 290402 CDS YP_001309610.1 150017356 5293699 2897483..2897959 1 NC_009617.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: tte:TTE0181 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 2897959 5293699 Cbei_2498 Clostridium beijerinckii NCIMB 8052 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_001309610.1 2897483 D 290402 CDS YP_001309611.1 150017357 5293700 2898011..2898295 1 NC_009617.1 PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: bcl:ABC3346 PTS system, galactitol-specific enzyme II, B component; phosphotransferase system, lactose/cellobiose-specific IIB subunit 2898295 5293700 Cbei_2499 Clostridium beijerinckii NCIMB 8052 phosphotransferase system, lactose/cellobiose-specific IIB subunit YP_001309611.1 2898011 D 290402 CDS YP_001309612.1 150017358 5293701 2898517..2899791 1 NC_009617.1 PFAM: PTS system Galactitol-specific IIC component; KEGG: lwe:lwe2614 PTS system, galactitol-specific, IIC component; PTS system galactitol-specific transporter subunit IIC 2899791 5293701 Cbei_2500 Clostridium beijerinckii NCIMB 8052 PTS system galactitol-specific transporter subunit IIC YP_001309612.1 2898517 D 290402 CDS YP_001309613.1 150017359 5293702 2900014..2901396 1 NC_009617.1 PFAM: 3-dehydroquinate synthase; KEGG: bha:BH1862 L-arabinose utilization protein; glycerol-1-phosphate dehydrogenase 2901396 5293702 Cbei_2501 Clostridium beijerinckii NCIMB 8052 glycerol-1-phosphate dehydrogenase YP_001309613.1 2900014 D 290402 CDS YP_001309614.1 150017360 5293703 2901586..2902401 1 NC_009617.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: fnu:FN1255 nagD protein; HAD family hydrolase 2902401 5293703 Cbei_2502 Clostridium beijerinckii NCIMB 8052 HAD family hydrolase YP_001309614.1 2901586 D 290402 CDS YP_001309615.1 150017361 5293704 2902537..2903583 1 NC_009617.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: pac:PPA2315 probable glycerol-3-phosphate dehydrogenase [NAD(P)+]; NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein 2903583 5293704 Cbei_2503 Clostridium beijerinckii NCIMB 8052 NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein YP_001309615.1 2902537 D 290402 CDS YP_001309616.1 150017362 5293705 2904121..2905563 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cth:Cthe_0511 histidine kinase; histidine kinase 2905563 5293705 Cbei_2504 Clostridium beijerinckii NCIMB 8052 histidine kinase YP_001309616.1 2904121 D 290402 CDS YP_001309617.1 150017363 5293706 2905955..2907007 1 NC_009617.1 KEGG: cpe:CPE1341 probable galactoside ABC transporter; galactoside ABC transporter 2907007 5293706 Cbei_2505 Clostridium beijerinckii NCIMB 8052 galactoside ABC transporter YP_001309617.1 2905955 D 290402 CDS YP_001309618.1 150017364 5293707 2907302..2907601 1 NC_009617.1 hypothetical protein 2907601 5293707 Cbei_2506 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309618.1 2907302 D 290402 CDS YP_001309619.1 150017365 5293708 complement(2908129..2909586) 1 NC_009617.1 KEGG: tte:TTE2242 transposase; transposase 2909586 5293708 Cbei_2507 Clostridium beijerinckii NCIMB 8052 transposase YP_001309619.1 2908129 R 290402 CDS YP_001309620.1 150017366 5293709 2909757..2911229 1 NC_009617.1 PFAM: protein of unknown function UPF0061; KEGG: gka:GK0436 hypothetical protein; hypothetical protein 2911229 5293709 Cbei_2508 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309620.1 2909757 D 290402 CDS YP_001309621.1 150017367 5293710 2911529..2911951 1 NC_009617.1 PFAM: 3D domain protein; KEGG: cno:NT01CX_0685 hypothetical protein; hypothetical protein 2911951 5293710 Cbei_2509 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309621.1 2911529 D 290402 CDS YP_001309622.1 150017368 5293711 2912518..2913183 1 NC_009617.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsy:DSY4690 hypothetical protein; polar amino acid ABC transporter inner membrane subunit 2913183 5293711 Cbei_2510 Clostridium beijerinckii NCIMB 8052 polar amino acid ABC transporter inner membrane subunit YP_001309622.1 2912518 D 290402 CDS YP_001309623.1 150017369 5293712 2913164..2913841 1 NC_009617.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsy:DSY4689 hypothetical protein; polar amino acid ABC transporter inner membrane subunit 2913841 5293712 Cbei_2511 Clostridium beijerinckii NCIMB 8052 polar amino acid ABC transporter inner membrane subunit YP_001309623.1 2913164 D 290402 CDS YP_001309624.1 150017370 5293713 2913853..2914602 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY4688 hypothetical protein; ABC transporter 2914602 5293713 Cbei_2512 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001309624.1 2913853 D 290402 CDS YP_001309625.1 150017371 5293714 2914626..2915498 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 3; KEGG: dsy:DSY4687 hypothetical protein; extracellular solute-binding protein 2915498 5293714 Cbei_2513 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001309625.1 2914626 D 290402 CDS YP_001309626.1 150017372 5293715 2915943..2917013 1 NC_009617.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: dsy:DSY1899 hypothetical protein; metal dependent phosphohydrolase 2917013 5293715 Cbei_2514 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001309626.1 2915943 D 290402 CDS YP_001309627.1 150017373 5293716 2917029..2919884 1 NC_009617.1 KEGG: swo:Swol_0601 signal transduction histidine kinase-like protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; GAF domain protein; multi-sensor hybrid histidine kinase 2919884 5293716 Cbei_2515 Clostridium beijerinckii NCIMB 8052 multi-sensor hybrid histidine kinase YP_001309627.1 2917029 D 290402 CDS YP_001309628.1 150017374 5293717 2919936..2920298 1 NC_009617.1 PFAM: response regulator receiver; KEGG: ctc:CTC01729 chemotaxis protein cheY; response regulator receiver protein 2920298 5293717 Cbei_2516 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001309628.1 2919936 D 290402 CDS YP_001309629.1 150017375 5293718 2920730..2921092 1 NC_009617.1 KEGG: mba:Mbar_A0144 conserved membrane protein, predicted permease; permease 2921092 5293718 Cbei_2517 Clostridium beijerinckii NCIMB 8052 permease YP_001309629.1 2920730 D 290402 CDS YP_001309630.1 150017376 5293719 complement(2921498..2922130) 1 NC_009617.1 KEGG: rru:Rru_A0914 aldehyde dehydrogenase; aldehyde dehydrogenase 2922130 5293719 Cbei_2518 Clostridium beijerinckii NCIMB 8052 aldehyde dehydrogenase YP_001309630.1 2921498 R 290402 CDS YP_001309631.1 150017377 5293720 2922575..2922979 1 NC_009617.1 KEGG: cpe:CPE1360 hypothetical protein; hypothetical protein 2922979 5293720 Cbei_2519 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309631.1 2922575 D 290402 CDS YP_001309632.1 150017378 5293721 complement(2923101..2924468) 1 NC_009617.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cac:CAC3354 probable cation efflux pump (multidrug resistance protein); MATE efflux family protein 2924468 5293721 Cbei_2520 Clostridium beijerinckii NCIMB 8052 MATE efflux family protein YP_001309632.1 2923101 R 290402 CDS YP_001309633.1 150017379 5293722 complement(2924566..2926098) 1 NC_009617.1 PFAM: helix-turn-helix, Fis-type; Propionate catabolism activator domain protein; KEGG: oih:OB1010 sigma-L-dependent transcriptional regulator; Fis family transcriptional regulator 2926098 5293722 Cbei_2521 Clostridium beijerinckii NCIMB 8052 Fis family transcriptional regulator YP_001309633.1 2924566 R 290402 CDS YP_001309634.1 150017380 5293723 complement(2926432..2928525) 1 NC_009617.1 TIGRFAM: ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent; KEGG: pcu:pc0111 ribonucleoside triphosphate reductase; ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent 2928525 5293723 Cbei_2522 Clostridium beijerinckii NCIMB 8052 ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent YP_001309634.1 2926432 R 290402 CDS YP_001309635.1 150017381 5293724 2929041..2929889 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: mmp:MMP0078 hypothetical protein; nitrite and sulfite reductase 4Fe-4S subunit 2929889 5293724 Cbei_2523 Clostridium beijerinckii NCIMB 8052 nitrite and sulfite reductase 4Fe-4S subunit YP_001309635.1 2929041 D 290402 CDS YP_001309636.1 150017382 5293725 2930022..2930834 1 NC_009617.1 TIGRFAM: Cof-like hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: cpr:CPR_0492 HAD hydrolase, IIB family; cof family hydrolase 2930834 5293725 Cbei_2524 Clostridium beijerinckii NCIMB 8052 cof family hydrolase YP_001309636.1 2930022 D 290402 CDS YP_001309637.1 150017383 5293726 2931164..2931739 1 NC_009617.1 PFAM: 3D domain protein; KEGG: bcl:ABC1928 peptidoglycan-binding domain-containing protein; hypothetical protein 2931739 5293726 Cbei_2525 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309637.1 2931164 D 290402 CDS YP_001309638.1 150017384 5293727 2932194..2932454 1 NC_009617.1 KEGG: bha:BH1562 hypothetical protein; hypothetical protein 2932454 5293727 Cbei_2526 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309638.1 2932194 D 290402 CDS YP_001309639.1 150017385 5293728 2932772..2935237 1 NC_009617.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; domain of unknown function DUF1745; KEGG: tdn:Tmden_0380 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains); diguanylate cyclase/phosphodiesterase 2935237 5293728 Cbei_2527 Clostridium beijerinckii NCIMB 8052 diguanylate cyclase/phosphodiesterase YP_001309639.1 2932772 D 290402 CDS YP_001309640.1 150017386 5293729 complement(2935335..2935937) 1 NC_009617.1 KEGG: dsy:DSY1535 hypothetical protein; hypothetical protein 2935937 5293729 Cbei_2528 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309640.1 2935335 R 290402 CDS YP_001309641.1 150017387 5293730 complement(2936106..2936708) 1 NC_009617.1 PFAM: protein of unknown function UPF0126; KEGG: lla:L169795 hypothetical protein; hypothetical protein 2936708 5293730 Cbei_2529 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309641.1 2936106 R 290402 CDS YP_001309642.1 150017388 5293731 complement(2936995..2938731) 1 NC_009617.1 TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA, central domain protein; SMART: ATPase AAA; KEGG: ctc:CTC00531 ATP-dependent zinc metallopeptidase; ATP-dependent metalloprotease FtsH 2938731 5293731 Cbei_2530 Clostridium beijerinckii NCIMB 8052 ATP-dependent metalloprotease FtsH YP_001309642.1 2936995 R 290402 CDS YP_001309643.1 150017389 5293732 complement(2938876..2939283) 1 NC_009617.1 PFAM: GtrA family protein; KEGG: sep:SE1997 hypothetical protein; GtrA family protein 2939283 5293732 Cbei_2531 Clostridium beijerinckii NCIMB 8052 GtrA family protein YP_001309643.1 2938876 R 290402 CDS YP_001309644.1 150017390 5293733 2940092..2941006 1 NC_009617.1 PFAM: peptidase U61, LD-carboxypeptidase A; KEGG: bld:BLi01397 YkfA; peptidase U61, LD-carboxypeptidase A 2941006 5293733 Cbei_2532 Clostridium beijerinckii NCIMB 8052 peptidase U61, LD-carboxypeptidase A YP_001309644.1 2940092 D 290402 CDS YP_001309645.1 150017391 5293734 2941041..2941859 1 NC_009617.1 PFAM: NLP/P60 protein; KEGG: lbu:LBUL_1667 cell wall-associated hydrolase; NLP/P60 protein 2941859 5293734 Cbei_2533 Clostridium beijerinckii NCIMB 8052 NLP/P60 protein YP_001309645.1 2941041 D 290402 CDS YP_001309646.1 150017392 5293735 2942348..2942572 1 NC_009617.1 PFAM: FeoA family protein; KEGG: cno:NT01CX_1592 ferrous iron transport protein A; FeoA family protein 2942572 5293735 Cbei_2534 Clostridium beijerinckii NCIMB 8052 FeoA family protein YP_001309646.1 2942348 D 290402 CDS YP_001309647.1 150017393 5293736 2942626..2944434 1 NC_009617.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: cpr:CPR_1631 ferrous iron transport protein B; ferrous iron transport protein B 2944434 5293736 Cbei_2535 Clostridium beijerinckii NCIMB 8052 ferrous iron transport protein B YP_001309647.1 2942626 D 290402 CDS YP_001309648.1 150017394 5293737 2944852..2945373 1 NC_009617.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: lsl:LSL_1368 hypothetical membrane spanning protein; membrane-bound metal-dependent hydrolase 2945373 5293737 Cbei_2536 Clostridium beijerinckii NCIMB 8052 membrane-bound metal-dependent hydrolase YP_001309648.1 2944852 D 290402 CDS YP_001309649.1 150017395 5293738 complement(2945677..2946636) 1 NC_009617.1 KEGG: gka:GK2460 hypothetical protein; hypothetical protein 2946636 5293738 Cbei_2537 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309649.1 2945677 R 290402 CDS YP_001309650.1 150017396 5293739 2946991..2947419 1 NC_009617.1 KEGG: cno:NT01CX_2384 6-pyruvoyl tetrahydrobiopterin synthase; 6-pyruvoyl tetrahydrobiopterin synthase 2947419 5293739 Cbei_2538 Clostridium beijerinckii NCIMB 8052 6-pyruvoyl tetrahydrobiopterin synthase YP_001309650.1 2946991 D 290402 CDS YP_001309651.1 150017397 5293740 2947432..2948100 1 NC_009617.1 PFAM: Radical SAM domain protein; KEGG: cno:NT01CX_2385 Fe-S oxidoreductase of MoaA family CAC3625; radical SAM domain-containing protein 2948100 5293740 Cbei_2539 Clostridium beijerinckii NCIMB 8052 radical SAM domain-containing protein YP_001309651.1 2947432 D 290402 CDS YP_001309652.1 150017398 5293741 2948190..2948783 1 NC_009617.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 2948783 folE 5293741 folE Clostridium beijerinckii NCIMB 8052 GTP cyclohydrolase I YP_001309652.1 2948190 D 290402 CDS YP_001309653.1 150017399 5293742 2948855..2949508 1 NC_009617.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: btl:BALH_1202 possible aluminum resistance protein; exsB protein 2949508 5293742 Cbei_2541 Clostridium beijerinckii NCIMB 8052 exsB protein YP_001309653.1 2948855 D 290402 CDS YP_001309654.1 150017400 5293743 2949546..2950049 1 NC_009617.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 2950049 5293743 Cbei_2542 Clostridium beijerinckii NCIMB 8052 7-cyano-7-deazaguanine reductase YP_001309654.1 2949546 D 290402 CDS YP_001309655.1 150017401 5293744 2950135..2951352 1 NC_009617.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cpr:CPR_1150 probable flavoprotein, YhiN family; hypothetical protein 2951352 5293744 Cbei_2543 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309655.1 2950135 D 290402 CDS YP_001309656.1 150017402 5293745 2951445..2952098 1 NC_009617.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 2952098 cmk 5293745 cmk Clostridium beijerinckii NCIMB 8052 cytidylate kinase YP_001309656.1 2951445 D 290402 CDS YP_001309657.1 150017403 5293746 2952112..2954019 1 NC_009617.1 these proteins appear to have resulted from a fusion of lytB and rpsA; catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2954019 5293746 Cbei_2545 Clostridium beijerinckii NCIMB 8052 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_001309657.1 2952112 D 290402 CDS YP_001309658.1 150017404 5293747 2954246..2954854 1 NC_009617.1 PFAM: NUDIX hydrolase; KEGG: cac:CAC3601 NUDIX (MutT) family hydrolase; NUDIX hydrolase 2954854 5293747 Cbei_2546 Clostridium beijerinckii NCIMB 8052 NUDIX hydrolase YP_001309658.1 2954246 D 290402 CDS YP_001309659.1 150017405 5293748 complement(2955012..2956304) 1 NC_009617.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: cpf:CPF_2907 xanthine/uracil permease family protein; xanthine/uracil/vitamin C permease 2956304 5293748 Cbei_2547 Clostridium beijerinckii NCIMB 8052 xanthine/uracil/vitamin C permease YP_001309659.1 2955012 R 290402 CDS YP_001309660.1 150017406 5293749 2956605..2957924 1 NC_009617.1 PFAM: protein of unknown function DUF815; KEGG: cth:Cthe_0284 protein of unknown function DUF815; hypothetical protein 2957924 5293749 Cbei_2548 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309660.1 2956605 D 290402 CDS YP_001309661.1 150017407 5293750 complement(2958037..2958552) 1 NC_009617.1 PFAM: Ferritin, Dps family protein; KEGG: cpf:CPF_1236 ferritin family protein; Ferritin, Dps family protein 2958552 5293750 Cbei_2549 Clostridium beijerinckii NCIMB 8052 Ferritin, Dps family protein YP_001309661.1 2958037 R 290402 CDS YP_001309662.1 150017408 5293751 2959184..2959822 1 NC_009617.1 PFAM: pentapeptide repeat protein; KEGG: cac:CAC0783 uncharacterized low-complexity protein; pentapeptide repeat-containing protein 2959822 5293751 Cbei_2550 Clostridium beijerinckii NCIMB 8052 pentapeptide repeat-containing protein YP_001309662.1 2959184 D 290402 CDS YP_001309663.1 150017409 5293752 2960016..2960507 1 NC_009617.1 hypothetical protein 2960507 5293752 Cbei_2551 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309663.1 2960016 D 290402 CDS YP_001309664.1 150017410 5293753 2960578..2960799 1 NC_009617.1 KEGG: cac:CAC2790 hypothetical protein; hypothetical protein 2960799 5293753 Cbei_2552 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309664.1 2960578 D 290402 CDS YP_001309665.1 150017411 5293754 2960848..2961018 1 NC_009617.1 hypothetical protein 2961018 5293754 Cbei_2553 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309665.1 2960848 D 290402 CDS YP_001309666.1 150017412 5293755 2961310..2962179 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC1840 predicted acetyltransferase domain containing protein; N-acetyltransferase GCN5 2962179 5293755 Cbei_2554 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001309666.1 2961310 D 290402 CDS YP_001309667.1 150017413 5293756 2962300..2963667 1 NC_009617.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 2963667 5293756 Cbei_2555 Clostridium beijerinckii NCIMB 8052 (dimethylallyl)adenosine tRNA methylthiotransferase YP_001309667.1 2962300 D 290402 CDS YP_001309668.1 150017414 5293757 complement(2964391..2964876) 1 NC_009617.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: cpr:CPR_1356 YbaK/EbsC protein; ybaK/ebsC protein 2964876 5293757 Cbei_2556 Clostridium beijerinckii NCIMB 8052 ybaK/ebsC protein YP_001309668.1 2964391 R 290402 CDS YP_001309669.1 150017415 5293758 2965678..2966667 1 NC_009617.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 2966667 xerC 5293758 xerC Clostridium beijerinckii NCIMB 8052 site-specific tyrosine recombinase XerC YP_001309669.1 2965678 D 290402 CDS YP_001309670.1 150017416 5293759 complement(2966797..2967516) 1 NC_009617.1 KEGG: rno:679128 hypothetical protein LOC679128; hypothetical protein 2967516 5293759 Cbei_2558 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309670.1 2966797 R 290402 CDS YP_001309671.1 150017417 5293760 complement(2967613..2968047) 1 NC_009617.1 KEGG: cpr:CPR_1178 hypothetical protein; hypothetical protein 2968047 5293760 Cbei_2559 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309671.1 2967613 R 290402 CDS YP_001309672.1 150017418 5293761 complement(2968195..2968698) 1 NC_009617.1 KEGG: cac:CAC2110 GAF domain-containing protein; GAF domain-containing protein 2968698 5293761 Cbei_2560 Clostridium beijerinckii NCIMB 8052 GAF domain-containing protein YP_001309672.1 2968195 R 290402 CDS YP_001309673.1 150017419 5293762 2968945..2969550 1 NC_009617.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 2969550 5293762 Cbei_2561 Clostridium beijerinckii NCIMB 8052 LexA repressor YP_001309673.1 2968945 D 290402 CDS YP_001309674.1 150017420 5293763 complement(2969698..2970990) 1 NC_009617.1 PFAM: Aluminium resistance family protein; KEGG: cac:CAC1833 cystathionine beta-lyase family protein, YNBB B.subtilis ortholog; aluminium resistance family protein 2970990 5293763 Cbei_2562 Clostridium beijerinckii NCIMB 8052 aluminium resistance family protein YP_001309674.1 2969698 R 290402 CDS YP_001309675.1 150017421 5293764 complement(2971055..2971300) 1 NC_009617.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein, core; KEGG: cac:CAC1834 host factor I protein Hfq; RNA chaperone Hfq 2971300 5293764 Cbei_2563 Clostridium beijerinckii NCIMB 8052 RNA chaperone Hfq YP_001309675.1 2971055 R 290402 CDS YP_001309676.1 150017422 5293765 complement(2971345..2972274) 1 NC_009617.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 2972274 miaA 5293765 miaA Clostridium beijerinckii NCIMB 8052 tRNA delta(2)-isopentenylpyrophosphate transferase YP_001309676.1 2971345 R 290402 CDS YP_001309677.1 150017423 5293766 complement(2972335..2974329) 1 NC_009617.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 2974329 mutL 5293766 mutL Clostridium beijerinckii NCIMB 8052 DNA mismatch repair protein YP_001309677.1 2972335 R 290402 CDS YP_001309678.1 150017424 5293767 complement(2974916..2976079) 1 NC_009617.1 KEGG: cpr:CPR_1122 hypothetical protein; hypothetical protein 2976079 5293767 Cbei_2566 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309678.1 2974916 R 290402 CDS YP_001309679.1 150017425 5293768 complement(2976240..2976893) 1 NC_009617.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 2976893 aat 5293768 aat Clostridium beijerinckii NCIMB 8052 leucyl/phenylalanyl-tRNA--protein transferase YP_001309679.1 2976240 R 290402 CDS YP_001309680.1 150017426 5293769 complement(2977227..2978006) 1 NC_009617.1 PFAM: pentapeptide repeat protein; KEGG: cac:CAC0073 uncharacterized protein, ortholog of YYBG B.subtilis; pentapeptide repeat-containing protein 2978006 5293769 Cbei_2568 Clostridium beijerinckii NCIMB 8052 pentapeptide repeat-containing protein YP_001309680.1 2977227 R 290402 CDS YP_001309681.1 150017427 5293770 complement(2978246..2981032) 1 NC_009617.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 2981032 5293770 Cbei_2569 Clostridium beijerinckii NCIMB 8052 DNA mismatch repair protein MutS YP_001309681.1 2978246 R 290402 CDS YP_001309682.1 150017428 5293771 complement(2981217..2982218) 1 NC_009617.1 KEGG: sak:SAK_1912 hypothetical protein; hypothetical protein 2982218 5293771 Cbei_2570 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309682.1 2981217 R 290402 CDS YP_001309683.1 150017429 5293772 complement(2982540..2983322) 1 NC_009617.1 hypothetical protein 2983322 5293772 Cbei_2571 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309683.1 2982540 R 290402 CDS YP_001309684.1 150017430 5293773 complement(2983679..2985139) 1 NC_009617.1 PFAM: aldehyde dehydrogenase; KEGG: cpf:CPF_2748 glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent; aldehyde dehydrogenase 2985139 5293773 Cbei_2572 Clostridium beijerinckii NCIMB 8052 aldehyde dehydrogenase YP_001309684.1 2983679 R 290402 CDS YP_001309685.1 150017431 5293774 complement(2985408..2986187) 1 NC_009617.1 PFAM: conserved hypothetical protein 245; KEGG: baa:BA_0048 ABC transport system permease; hypothetical protein 2986187 5293774 Cbei_2573 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309685.1 2985408 R 290402 CDS YP_001309686.1 150017432 5293775 complement(2986180..2986815) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bca:BCE_5078 ABC transporter ATP-binding protein; ABC transporter 2986815 5293775 Cbei_2574 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001309686.1 2986180 R 290402 CDS YP_001309687.1 150017433 5293776 complement(2987013..2988551) 1 NC_009617.1 TIGRFAM: LexA repressor; PFAM: peptidase S24, S26A and S26B; KEGG: cac:CAC1793 P-loop ATPase domain fused to LexA-like protein; prophage repressor 2988551 5293776 Cbei_2575 Clostridium beijerinckii NCIMB 8052 prophage repressor YP_001309687.1 2987013 R 290402 CDS YP_001309688.1 150017434 5293777 2988805..2989593 1 NC_009617.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: cac:CAC2244 HAD superfamily hydrolases, YkrA B.subtilis ortholog; cof family hydrolase 2989593 5293777 Cbei_2576 Clostridium beijerinckii NCIMB 8052 cof family hydrolase YP_001309688.1 2988805 D 290402 CDS YP_001309689.1 150017435 5293778 2989795..2990937 1 NC_009617.1 KEGG: pfa:PF14_0302 hypothetical protein; hypothetical protein 2990937 5293778 Cbei_2577 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309689.1 2989795 D 290402 CDS YP_001309690.1 150017436 5293779 complement(2991141..2992190) 1 NC_009617.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: cpf:CPF_0482 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 2992190 5293779 Cbei_2578 Clostridium beijerinckii NCIMB 8052 dTDP-glucose 4,6-dehydratase YP_001309690.1 2991141 R 290402 CDS YP_001309691.1 150017437 5293780 complement(2992209..2993090) 1 NC_009617.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: cpf:CPF_0599 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 2993090 5293780 Cbei_2579 Clostridium beijerinckii NCIMB 8052 dTDP-4-dehydrorhamnose reductase YP_001309691.1 2992209 R 290402 CDS YP_001309692.1 150017438 5293781 complement(2993420..2994919) 1 NC_009617.1 KEGG: mma:MM0214 hypothetical protein; hypothetical protein 2994919 5293781 Cbei_2580 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309692.1 2993420 R 290402 CDS YP_001309693.1 150017439 5293782 complement(2995019..2995288) 1 NC_009617.1 KEGG: cac:CAC2352 hypothetical protein; hypothetical protein 2995288 5293782 Cbei_2581 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309693.1 2995019 R 290402 CDS YP_001309694.1 150017440 5293783 complement(2995375..2996898) 1 NC_009617.1 KEGG: tte:TTE1676 hypothetical protein; hypothetical protein 2996898 5293783 Cbei_2582 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309694.1 2995375 R 290402 CDS YP_001309695.1 150017441 5293784 2997071..2997835 1 NC_009617.1 KEGG: cth:Cthe_1088 hypothetical protein; hypothetical protein 2997835 5293784 Cbei_2583 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309695.1 2997071 D 290402 CDS YP_001309696.1 150017442 5293785 2998103..2998603 1 NC_009617.1 hypothetical protein 2998603 5293785 Cbei_2584 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309696.1 2998103 D 290402 CDS YP_001309697.1 150017443 5293786 2998788..2999846 1 NC_009617.1 PFAM: glycosyl transferase, group 1; KEGG: cno:NT01CX_1800 glycosyltransferase; group 1 glycosyl transferase 2999846 5293786 Cbei_2585 Clostridium beijerinckii NCIMB 8052 group 1 glycosyl transferase YP_001309697.1 2998788 D 290402 CDS YP_001309698.1 150017444 5293787 2999997..3001409 1 NC_009617.1 PFAM: glycosyl transferase, family 2; Methyltransferase type 11; KEGG: cac:CAC2347 glycosyltransferase; glycosyl transferase family protein 3001409 5293787 Cbei_2586 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001309698.1 2999997 D 290402 CDS YP_001309699.1 150017445 5293788 3002097..3004841 1 NC_009617.1 PFAM: Collagen triple helix repeat; KEGG: bcl:ABC0473 hypothetical protein; triple helix repeat-containing collagen 3004841 5293788 Cbei_2587 Clostridium beijerinckii NCIMB 8052 triple helix repeat-containing collagen YP_001309699.1 3002097 D 290402 CDS YP_001309700.1 150017446 5293789 3005110..3012345 1 NC_009617.1 PFAM: Collagen triple helix repeat; KEGG: mlo:mlr0587 hypothetical glycine-rich protein; triple helix repeat-containing collagen 3012345 5293789 Cbei_2588 Clostridium beijerinckii NCIMB 8052 triple helix repeat-containing collagen YP_001309700.1 3005110 D 290402 CDS YP_001309701.1 150017447 5293790 3012590..3013663 1 NC_009617.1 PFAM: glycosyl transferase, family 2; TPR repeat-containing protein; KEGG: dsy:DSY4437 hypothetical protein; glycosyl transferase family protein 3013663 5293790 Cbei_2589 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001309701.1 3012590 D 290402 CDS YP_001309702.1 150017448 5293791 3013887..3015026 1 NC_009617.1 KEGG: chu:CHU_0854 capsular polysaccharide biosynthesis protein; capsular polysaccharide biosynthesis protein-like protein 3015026 5293791 Cbei_2590 Clostridium beijerinckii NCIMB 8052 capsular polysaccharide biosynthesis protein-like protein YP_001309702.1 3013887 D 290402 CDS YP_001309703.1 150017449 5293792 3015102..3016727 1 NC_009617.1 PFAM: glycosyl transferase, family 2; KEGG: chy:CHY_0980 glycosyl transferase, group 2 family; glycosyl transferase family protein 3016727 5293792 Cbei_2591 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001309703.1 3015102 D 290402 CDS YP_001309704.1 150017450 5293793 complement(3016922..3017857) 1 NC_009617.1 KEGG: sit:TM1040_3425 hypothetical protein; hypothetical protein 3017857 5293793 Cbei_2592 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309704.1 3016922 R 290402 CDS YP_001309705.1 150017451 5293794 complement(3017865..3018776) 1 NC_009617.1 KEGG: azo:azo2678 conserved hypothetical protein; hypothetical protein 3018776 5293794 Cbei_2593 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309705.1 3017865 R 290402 CDS YP_001309706.1 150017452 5293795 complement(3018781..3019458) 1 NC_009617.1 KEGG: xom:XOO_2848 hypothetical protein; hypothetical protein 3019458 5293795 Cbei_2594 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309706.1 3018781 R 290402 CDS YP_001309707.1 150017453 5293796 complement(3019476..3020231) 1 NC_009617.1 hypothetical protein 3020231 5293796 Cbei_2595 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309707.1 3019476 R 290402 CDS YP_001309708.1 150017454 5293797 3020554..3020961 1 NC_009617.1 PFAM: WxcM domain protein, C-terminal domain protein; KEGG: dsy:DSY3318 hypothetical protein; WxcM domain-containing protein 3020961 5293797 Cbei_2596 Clostridium beijerinckii NCIMB 8052 WxcM domain-containing protein YP_001309708.1 3020554 D 290402 CDS YP_001309709.1 150017455 5293798 3020973..3022067 1 NC_009617.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gme:Gmet_1325 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 3022067 5293798 Cbei_2597 Clostridium beijerinckii NCIMB 8052 DegT/DnrJ/EryC1/StrS aminotransferase YP_001309709.1 3020973 D 290402 CDS YP_001309710.1 150017456 5293799 complement(3022163..3023899) 1 NC_009617.1 PFAM: amine oxidase; KEGG: ter:Tery_1366 amine oxidase; amine oxidase 3023899 5293799 Cbei_2598 Clostridium beijerinckii NCIMB 8052 amine oxidase YP_001309710.1 3022163 R 290402 CDS YP_001309711.1 150017457 5293800 complement(3023966..3025105) 1 NC_009617.1 TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase, class V; KEGG: cac:CAC2354 NifS family aminotransferase; cysteine desulfurase 3025105 5293800 Cbei_2599 Clostridium beijerinckii NCIMB 8052 cysteine desulfurase YP_001309711.1 3023966 R 290402 CDS YP_001309712.1 150017458 5293801 complement(3025500..3026273) 1 NC_009617.1 KEGG: cth:Cthe_1088 hypothetical protein; hypothetical protein 3026273 5293801 Cbei_2600 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309712.1 3025500 R 290402 CDS YP_001309713.1 150017459 5293802 complement(3026693..3027268) 1 NC_009617.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; KEGG: cpf:CPF_0598 dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase 3027268 5293802 Cbei_2601 Clostridium beijerinckii NCIMB 8052 dTDP-4-dehydrorhamnose 3,5-epimerase YP_001309713.1 3026693 R 290402 CDS YP_001309714.1 150017460 5293803 complement(3027271..3028185) 1 NC_009617.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: cpf:CPF_0597 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 3028185 5293803 Cbei_2602 Clostridium beijerinckii NCIMB 8052 glucose-1-phosphate thymidylyltransferase YP_001309714.1 3027271 R 290402 CDS YP_001309715.1 150017461 5293804 3028374..3030161 1 NC_009617.1 PFAM: Collagen triple helix repeat; KEGG: btl:BALH_1312 collagen-like protein; triple helix repeat-containing collagen 3030161 5293804 Cbei_2603 Clostridium beijerinckii NCIMB 8052 triple helix repeat-containing collagen YP_001309715.1 3028374 D 290402 CDS YP_001309716.1 150017462 5293805 complement(3030296..3031828) 1 NC_009617.1 PFAM: glycosyl transferase, family 2; KEGG: mst:Msp_0493 predicted glycosyltransferase; glycosyl transferase family protein 3031828 5293805 Cbei_2604 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001309716.1 3030296 R 290402 CDS YP_001309717.1 150017463 5293806 complement(3032297..3032737) 1 NC_009617.1 hypothetical protein 3032737 5293806 Cbei_2605 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309717.1 3032297 R 290402 CDS YP_001309718.1 150017464 5293807 complement(3032925..3033446) 1 NC_009617.1 hypothetical protein 3033446 5293807 Cbei_2606 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309718.1 3032925 R 290402 CDS YP_001309719.1 150017465 5293808 3033859..3034188 1 NC_009617.1 hypothetical protein 3034188 5293808 Cbei_2607 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309719.1 3033859 D 290402 CDS YP_001309720.1 150017466 5293809 complement(3034244..3034618) 1 NC_009617.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 3034618 5293809 Cbei_2608 Clostridium beijerinckii NCIMB 8052 aspartate alpha-decarboxylase YP_001309720.1 3034244 R 290402 CDS YP_001309721.1 150017467 5293810 complement(3034987..3035829) 1 NC_009617.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 3035829 panC 5293810 panC Clostridium beijerinckii NCIMB 8052 pantoate--beta-alanine ligase YP_001309721.1 3034987 R 290402 CDS YP_001309722.1 150017468 5293811 complement(3036229..3037056) 1 NC_009617.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3037056 panB 5293811 panB Clostridium beijerinckii NCIMB 8052 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_001309722.1 3036229 R 290402 CDS YP_001309723.1 150017469 5293812 complement(3037056..3038045) 1 NC_009617.1 KEGG: cno:NT01CX_1070 hypothetical protein; hypothetical protein 3038045 5293812 Cbei_2611 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309723.1 3037056 R 290402 CDS YP_001309724.1 150017470 5296379 complement(3039905..3040264) 1 NC_009617.1 hypothetical protein 3040264 5296379 Cbei_2614 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309724.1 3039905 R 290402 CDS YP_001309725.1 150017471 5293814 complement(3040338..3040586) 1 NC_009617.1 hypothetical protein 3040586 5293814 Cbei_2615 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309725.1 3040338 R 290402 CDS YP_001309726.1 150017472 5293815 complement(3040831..3041193) 1 NC_009617.1 hypothetical protein 3041193 5293815 Cbei_2616 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309726.1 3040831 R 290402 CDS YP_001309727.1 150017473 5293816 3041357..3041929 1 NC_009617.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: ctc:pE88_11 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 factor 3041929 5293816 Cbei_2617 Clostridium beijerinckii NCIMB 8052 ECF subfamily RNA polymerase sigma-24 factor YP_001309727.1 3041357 D 290402 CDS YP_001309728.1 150017474 5293817 complement(3042003..3042245) 1 NC_009617.1 hypothetical protein 3042245 5293817 Cbei_2618 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309728.1 3042003 R 290402 CDS YP_001309729.1 150017475 5293818 3042533..3043063 1 NC_009617.1 hypothetical protein 3043063 5293818 Cbei_2619 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309729.1 3042533 D 290402 CDS YP_001309730.1 150017476 5293819 3043164..3043364 1 NC_009617.1 hypothetical protein 3043364 5293819 Cbei_2620 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309730.1 3043164 D 290402 CDS YP_001309731.1 150017477 5293820 complement(3043721..3044281) 1 NC_009617.1 hypothetical protein 3044281 5293820 Cbei_2621 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309731.1 3043721 R 290402 CDS YP_001309732.1 150017478 5293821 complement(3044691..3045386) 1 NC_009617.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cac:CAC2574 predicted S-adenosylmethionine-dependent methyltransferase; type 11 methyltransferase 3045386 5293821 Cbei_2622 Clostridium beijerinckii NCIMB 8052 type 11 methyltransferase YP_001309732.1 3044691 R 290402 CDS YP_001309733.1 150017479 5293822 complement(3045927..3046460) 1 NC_009617.1 KEGG: cth:Cthe_1520 hypothetical protein; hypothetical protein 3046460 5293822 Cbei_2623 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309733.1 3045927 R 290402 CDS YP_001309734.1 150017480 5293823 complement(3047960..3048478) 1 NC_009617.1 KEGG: bth:BT_4528 hypothetical protein; hypothetical protein 3048478 5293823 Cbei_2624 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309734.1 3047960 R 290402 CDS YP_001309735.1 150017481 5293824 complement(3048591..3049172) 1 NC_009617.1 hypothetical protein 3049172 5293824 Cbei_2625 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309735.1 3048591 R 290402 CDS YP_001309736.1 150017482 5293825 complement(3049243..3049947) 1 NC_009617.1 PFAM: Endonuclease V; KEGG: btk:BT9727_3063 deoxyinosine 3'endonuclease (endonuclease V); deoxyribonuclease V 3049947 5293825 Cbei_2626 Clostridium beijerinckii NCIMB 8052 deoxyribonuclease V YP_001309736.1 3049243 R 290402 CDS YP_001309737.1 150017483 5293826 complement(3049994..3050446) 1 NC_009617.1 KEGG: btk:BT9727_3064 hypothetical protein; hypothetical protein 3050446 5293826 Cbei_2627 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309737.1 3049994 R 290402 CDS YP_001309738.1 150017484 5293827 complement(3050684..3051511) 1 NC_009617.1 KEGG: mxa:MXAN_4193 hypothetical protein; hypothetical protein 3051511 5293827 Cbei_2628 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309738.1 3050684 R 290402 CDS YP_001309739.1 150017485 5293828 complement(3051627..3051920) 1 NC_009617.1 hypothetical protein 3051920 5293828 Cbei_2629 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309739.1 3051627 R 290402 CDS YP_001309740.1 150017486 5293829 complement(3052307..3052483) 1 NC_009617.1 hypothetical protein 3052483 5293829 Cbei_2630 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309740.1 3052307 R 290402 CDS YP_001309741.1 150017487 5293830 complement(3052807..3053301) 1 NC_009617.1 KEGG: cac:CAC3701 hypothetical protein, CF-44 family; hypothetical protein 3053301 5293830 Cbei_2631 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309741.1 3052807 R 290402 CDS YP_001309742.1 150017488 5293831 complement(3053588..3053962) 1 NC_009617.1 hypothetical protein 3053962 5293831 Cbei_2632 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309742.1 3053588 R 290402 CDS YP_001309743.1 150017489 5293832 complement(3053982..3054656) 1 NC_009617.1 KEGG: bat:BAS2050 hypothetical protein; hypothetical protein 3054656 5293832 Cbei_2633 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309743.1 3053982 R 290402 CDS YP_001309744.1 150017490 5293833 complement(3054950..3055564) 1 NC_009617.1 KEGG: cac:CAC2030 hypothetical protein; hypothetical protein 3055564 5293833 Cbei_2634 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309744.1 3054950 R 290402 CDS YP_001309745.1 150017491 5293834 complement(3055561..3058167) 1 NC_009617.1 KEGG: lin:lin0059 hypothetical protein; hypothetical protein 3058167 5293834 Cbei_2635 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309745.1 3055561 R 290402 CDS YP_001309746.1 150017492 5293835 complement(3058232..3058612) 1 NC_009617.1 hypothetical protein 3058612 5293835 Cbei_2636 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309746.1 3058232 R 290402 CDS YP_001309747.1 150017493 5293836 complement(3058624..3059139) 1 NC_009617.1 hypothetical protein 3059139 5293836 Cbei_2637 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309747.1 3058624 R 290402 CDS YP_001309748.1 150017494 5293837 complement(3059153..3060313) 1 NC_009617.1 PFAM: pentapeptide repeat protein; KEGG: btk:BT9727_0977 conserved hypothetical protein, possible quinolone resistance protein; pentapeptide repeat-containing protein 3060313 5293837 Cbei_2638 Clostridium beijerinckii NCIMB 8052 pentapeptide repeat-containing protein YP_001309748.1 3059153 R 290402 CDS YP_001309749.1 150017495 5293838 complement(3060317..3061744) 1 NC_009617.1 hypothetical protein 3061744 5293838 Cbei_2639 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309749.1 3060317 R 290402 CDS YP_001309750.1 150017496 5293839 complement(3061744..3062346) 1 NC_009617.1 hypothetical protein 3062346 5293839 Cbei_2640 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309750.1 3061744 R 290402 CDS YP_001309751.1 150017497 5293840 3062965..3063942 1 NC_009617.1 PFAM: phage integrase family protein; KEGG: chy:CHY_1702 prophage LambdaCh01, site-specific recombinase, phage integrase family; phage integrase family protein 3063942 5293840 Cbei_2641 Clostridium beijerinckii NCIMB 8052 phage integrase family protein YP_001309751.1 3062965 D 290402 CDS YP_001309752.1 150017498 5293841 complement(3064156..3064863) 1 NC_009617.1 PFAM: MgtC/SapB transporter; KEGG: cth:Cthe_1919 MgtC/SapB transporter; MgtC/SapB transporter 3064863 5293841 Cbei_2642 Clostridium beijerinckii NCIMB 8052 MgtC/SapB transporter YP_001309752.1 3064156 R 290402 CDS YP_001309753.1 150017499 5293842 complement(3064897..3068154) 1 NC_009617.1 PFAM: SNF2-related protein; helicase domain protein; type III restriction protein, res subunit; zinc finger, SWIM domain protein; SNF2 helicase associated domain protein; SMART: DEAD-like helicases-like; KEGG: cpe:CPE1625 SWI/SNF family helicase; non-specific serine/threonine protein kinase 3068154 5293842 Cbei_2643 Clostridium beijerinckii NCIMB 8052 non-specific serine/threonine protein kinase YP_001309753.1 3064897 R 290402 CDS YP_001309754.1 150017500 5293843 complement(3068151..3068360) 1 NC_009617.1 KEGG: cno:NT01CX_0981 hypothetical protein; hypothetical protein 3068360 5293843 Cbei_2644 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309754.1 3068151 R 290402 CDS YP_001309755.1 150017501 5293844 complement(3068429..3070369) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_2868 ABC transporter ATP-binding protein; ABC transporter 3070369 5293844 Cbei_2645 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001309755.1 3068429 R 290402 CDS YP_001309756.1 150017502 5293845 3071264..3072946 1 NC_009617.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein, central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: azo:azo1034 acetolactate synthase; acetolactate synthase large subunit 3072946 5293845 Cbei_2646 Clostridium beijerinckii NCIMB 8052 acetolactate synthase large subunit YP_001309756.1 3071264 D 290402 CDS YP_001309757.1 150017503 5293846 3072939..3073244 1 NC_009617.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: dar:Daro_1619 amino acid-binding ACT; acetolactate synthase small subunit 3073244 5293846 Cbei_2647 Clostridium beijerinckii NCIMB 8052 acetolactate synthase small subunit YP_001309757.1 3072939 D 290402 CDS YP_001309758.1 150017504 5293847 complement(3074000..3074149) 1 NC_009617.1 hypothetical protein 3074149 5293847 Cbei_2648 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309758.1 3074000 R 290402 CDS YP_001309759.1 150017505 5293848 complement(3074675..3075391) 1 NC_009617.1 PFAM: Ferric reductase domain protein transmembrane component, N-terminal domain; KEGG: cac:CAC0200 uncharacterized membrane protein; ferric reductase domain-containing protein 3075391 5293848 Cbei_2649 Clostridium beijerinckii NCIMB 8052 ferric reductase domain-containing protein YP_001309759.1 3074675 R 290402 CDS YP_001309760.1 150017506 5296380 3075915..3076613 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC1535 ABC transporter ATPase component; ABC transporter 3076613 5296380 Cbei_2651 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001309760.1 3075915 D 290402 CDS YP_001309761.1 150017507 5293850 3076613..3078856 1 NC_009617.1 PFAM: protein of unknown function DUF214; KEGG: cac:CAC1534 predicted permease; hypothetical protein 3078856 5293850 Cbei_2652 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309761.1 3076613 D 290402 CDS YP_001309762.1 150017508 5293851 complement(3079027..3079680) 1 NC_009617.1 TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; KEGG: cno:NT01CX_0277 butyrate-acetoacetate CoA-transferase subunit B; 3-oxoacid CoA-transferase subunit B 3079680 5293851 Cbei_2653 Clostridium beijerinckii NCIMB 8052 3-oxoacid CoA-transferase subunit B YP_001309762.1 3079027 R 290402 CDS YP_001309763.1 150017509 5293852 complement(3079692..3080408) 1 NC_009617.1 TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; KEGG: cno:NT01CX_0278 acetate CoA-transferase alpha subunit; 3-oxoacid CoA-transferase subunit A 3080408 5293852 Cbei_2654 Clostridium beijerinckii NCIMB 8052 3-oxoacid CoA-transferase subunit A YP_001309763.1 3079692 R 290402 CDS YP_001309764.1 150017510 5293853 complement(3080995..3082629) 1 NC_009617.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cbu:CBU_1364 hypothetical protein; hypothetical protein 3082629 5293853 Cbei_2655 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309764.1 3080995 R 290402 CDS YP_001309765.1 150017511 5293854 complement(3083340..3084734) 1 NC_009617.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: lwe:lwe0003 MATE efflux family protein; MATE efflux family protein 3084734 5293854 Cbei_2656 Clostridium beijerinckii NCIMB 8052 MATE efflux family protein YP_001309765.1 3083340 R 290402 CDS YP_001309766.1 150017512 5293855 3084990..3085781 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; Cupin 2, conserved barrel domain protein; KEGG: lwe:lwe2180 transcriptional regulator, AraC family; AraC family transcriptional regulator 3085781 5293855 Cbei_2657 Clostridium beijerinckii NCIMB 8052 AraC family transcriptional regulator YP_001309766.1 3084990 D 290402 CDS YP_001309767.1 150017513 5293856 complement(3085784..3086122) 1 NC_009617.1 KEGG: ctc:CTC00651 hypothetical protein; hypothetical protein 3086122 5293856 Cbei_2658 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309767.1 3085784 R 290402 CDS YP_001309768.1 150017514 5293857 complement(3086428..3087213) 1 NC_009617.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: tte:TTE0052 16S rRNA uridine-516 pseudouridylate synthase and related Pseudouridylate synthase; pseudouridine synthase 3087213 5293857 Cbei_2659 Clostridium beijerinckii NCIMB 8052 pseudouridine synthase YP_001309768.1 3086428 R 290402 CDS YP_001309769.1 150017515 5293858 complement(3087452..3088603) 1 NC_009617.1 PFAM: protein of unknown function DUF871; KEGG: bce:BC0805 outer surface protein; hypothetical protein 3088603 5293858 Cbei_2660 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309769.1 3087452 R 290402 CDS YP_001309770.1 150017516 5293859 complement(3089033..3090439) 1 NC_009617.1 KEGG: cth:Cthe_0634 serine/threonine protein kinase; hypothetical protein 3090439 5293859 Cbei_2661 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309770.1 3089033 R 290402 CDS YP_001309771.1 150017517 5293860 complement(3090465..3091568) 1 NC_009617.1 PFAM: cell wall hydrolase/autolysin; KEGG: cth:Cthe_0185 cell wall hydrolase/autolysin; cell wall hydrolase/autolysin 3091568 5293860 Cbei_2662 Clostridium beijerinckii NCIMB 8052 cell wall hydrolase/autolysin YP_001309771.1 3090465 R 290402 CDS YP_001309772.1 150017518 5293861 complement(3091678..3091983) 1 NC_009617.1 PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: sha:SH0190 hypothetical protein; PTS system lactose/cellobiose-specific transporter subunit IIA 3091983 5293861 Cbei_2663 Clostridium beijerinckii NCIMB 8052 PTS system lactose/cellobiose-specific transporter subunit IIA YP_001309772.1 3091678 R 290402 CDS YP_001309773.1 150017519 5293862 complement(3092002..3093312) 1 NC_009617.1 PFAM: glycoside hydrolase, family 4; KEGG: tte:TTE0337 Alpha-galactosidases/6-phospho-beta- glucosidases, family 4 of glycosyl hydrolases; glycoside hydrolase 3093312 5293862 Cbei_2664 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001309773.1 3092002 R 290402 CDS YP_001309774.1 150017520 5293863 complement(3093393..3094643) 1 NC_009617.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system, EIIC; KEGG: sha:SH0189 hypothetical protein; PTS system lactose/cellobiose family transporter subunit IIC 3094643 5293863 Cbei_2665 Clostridium beijerinckii NCIMB 8052 PTS system lactose/cellobiose family transporter subunit IIC YP_001309774.1 3093393 R 290402 CDS YP_001309775.1 150017521 5293864 complement(3094672..3094980) 1 NC_009617.1 PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: sha:SH0188 hypothetical protein; phosphotransferase system, lactose/cellobiose-specific IIB subunit 3094980 5293864 Cbei_2666 Clostridium beijerinckii NCIMB 8052 phosphotransferase system, lactose/cellobiose-specific IIB subunit YP_001309775.1 3094672 R 290402 CDS YP_001309776.1 150017522 5293865 3095296..3096342 1 NC_009617.1 PFAM: fatty acid desaturase; KEGG: bca:BCE_0466 fatty acid desaturase; fatty acid desaturase 3096342 5293865 Cbei_2667 Clostridium beijerinckii NCIMB 8052 fatty acid desaturase YP_001309776.1 3095296 D 290402 CDS YP_001309777.1 150017523 5293866 complement(3097088..3097813) 1 NC_009617.1 KEGG: cac:CAC2041 ABC transported MDR-type, permease component; hypothetical protein 3097813 5293866 Cbei_2668 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309777.1 3097088 R 290402 CDS YP_001309778.1 150017524 5293867 complement(3097810..3098793) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcz:BCZK0256 bacitracin ABC transporter ATP-binding protein; ABC transporter 3098793 5293867 Cbei_2669 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001309778.1 3097810 R 290402 CDS YP_001309779.1 150017525 5293868 3099451..3101706 1 NC_009617.1 KEGG: mlo:mll0592 hypothetical protein; hypothetical protein 3101706 5293868 Cbei_2670 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309779.1 3099451 D 290402 CDS YP_001309780.1 150017526 5293869 complement(3101984..3105157) 1 NC_009617.1 PFAM: SNF2-related protein; helicase domain protein; zinc finger, SWIM domain protein; SNF2 helicase associated domain protein; SMART: DEAD-like helicases-like; KEGG: ctc:CTC01850 SWF/SNF family helicase; non-specific serine/threonine protein kinase 3105157 5293869 Cbei_2671 Clostridium beijerinckii NCIMB 8052 non-specific serine/threonine protein kinase YP_001309780.1 3101984 R 290402 CDS YP_001309781.1 150017527 5293870 complement(3105771..3106019) 1 NC_009617.1 hypothetical protein 3106019 5293870 Cbei_2672 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309781.1 3105771 R 290402 CDS YP_001309782.1 150017528 5293871 complement(3106216..3106848) 1 NC_009617.1 hypothetical protein 3106848 5293871 Cbei_2673 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309782.1 3106216 R 290402 CDS YP_001309783.1 150017529 5293872 complement(3107102..3107278) 1 NC_009617.1 PFAM: ribosomal protein S21; KEGG: cac:CAC1288 30S ribosomal protein S21; 30S ribosomal protein S21 3107278 5293872 Cbei_2674 Clostridium beijerinckii NCIMB 8052 30S ribosomal protein S21 YP_001309783.1 3107102 R 290402 CDS YP_001309784.1 150017530 5293873 complement(3107704..3109971) 1 NC_009617.1 PFAM: coagulation factor 5/8 type domain protein; KEGG: sco:SCO0545 secreted protein; coagulation factor 5/8 type domain-containing protein 3109971 5293873 Cbei_2675 Clostridium beijerinckii NCIMB 8052 coagulation factor 5/8 type domain-containing protein YP_001309784.1 3107704 R 290402 CDS YP_001309785.1 150017531 5293874 complement(3110706..3111914) 1 NC_009617.1 PFAM: aldo/keto reductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mmp:MMP0208 hypothetical protein; aldo/keto reductase 3111914 5293874 Cbei_2676 Clostridium beijerinckii NCIMB 8052 aldo/keto reductase YP_001309785.1 3110706 R 290402 CDS YP_001309786.1 150017532 5293875 3112212..3112829 1 NC_009617.1 KEGG: cpe:CPE1443 hypothetical protein; hypothetical protein 3112829 5293875 Cbei_2677 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309786.1 3112212 D 290402 CDS YP_001309787.1 150017533 5293876 complement(3112956..3113972) 1 NC_009617.1 PFAM: Pirin domain protein; KEGG: cac:CAC1492 uncharacterized protein, YhhW/pirin family; pirin domain-containing protein 3113972 5293876 Cbei_2678 Clostridium beijerinckii NCIMB 8052 pirin domain-containing protein YP_001309787.1 3112956 R 290402 CDS YP_001309788.1 150017534 5293877 3114666..3115265 1 NC_009617.1 KEGG: swo:Swol_1911 hypothetical protein; hypothetical protein 3115265 5293877 Cbei_2679 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309788.1 3114666 D 290402 CDS YP_001309789.1 150017535 5293878 complement(3115720..3116205) 1 NC_009617.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cac:CAC3306 thiol peroxidase, TPX; redoxin domain-containing protein 3116205 5293878 Cbei_2680 Clostridium beijerinckii NCIMB 8052 redoxin domain-containing protein YP_001309789.1 3115720 R 290402 CDS YP_001309790.1 150017536 5293879 complement(3116251..3117159) 1 NC_009617.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tte:TTE2220 thioredoxin reductase; thioredoxin reductase 3117159 5293879 Cbei_2681 Clostridium beijerinckii NCIMB 8052 thioredoxin reductase YP_001309790.1 3116251 R 290402 CDS YP_001309791.1 150017537 5293880 3117854..3118411 1 NC_009617.1 hypothetical protein 3118411 5293880 Cbei_2682 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309791.1 3117854 D 290402 CDS YP_001309792.1 150017538 5293881 complement(3118500..3119195) 1 NC_009617.1 KEGG: cac:CAC3022 alpha/beta superfamily hydrolase; alpha/beta fold family hydrolase 3119195 5293881 Cbei_2683 Clostridium beijerinckii NCIMB 8052 alpha/beta fold family hydrolase YP_001309792.1 3118500 R 290402 CDS YP_001309793.1 150017539 5293882 complement(3119174..3119803) 1 NC_009617.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: tde:TDE1291 HD domain protein; metal dependent phosphohydrolase 3119803 5293882 Cbei_2684 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001309793.1 3119174 R 290402 CDS YP_001309794.1 150017540 5293883 complement(3120819..3121418) 1 NC_009617.1 PFAM: Abortive infection protein; KEGG: cef:CE0449 hypothetical protein; abortive infection protein 3121418 5293883 Cbei_2685 Clostridium beijerinckii NCIMB 8052 abortive infection protein YP_001309794.1 3120819 R 290402 CDS YP_001309795.1 150017541 5293884 complement(3122188..3123006) 1 NC_009617.1 PFAM: regulatory protein, MerR; transcription activator, effector binding; KEGG: bce:BC3486 transcriptional regulator, MerR family; transcription activator, effector binding 3123006 5293884 Cbei_2686 Clostridium beijerinckii NCIMB 8052 transcription activator, effector binding YP_001309795.1 3122188 R 290402 CDS YP_001309796.1 150017542 5293885 complement(3123682..3124164) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mba:Mbar_A2328 hypothetical protein; N-acetyltransferase GCN5 3124164 5293885 Cbei_2687 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001309796.1 3123682 R 290402 CDS YP_001309797.1 150017543 5293886 complement(3124297..3124812) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ser:SERP0994 acetyltransferase, GNAT family; N-acetyltransferase GCN5 3124812 5293886 Cbei_2688 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001309797.1 3124297 R 290402 CDS YP_001309798.1 150017544 5293887 complement(3125007..3125354) 1 NC_009617.1 KEGG: cac:CAC0159 hypothetical protein; hypothetical protein 3125354 5293887 Cbei_2689 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309798.1 3125007 R 290402 CDS YP_001309799.1 150017545 5293888 complement(3125466..3126158) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3126158 5293888 Cbei_2690 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001309799.1 3125466 R 290402 CDS YP_001309800.1 150017546 5293889 complement(3126155..3127087) 1 NC_009617.1 PFAM: homocysteine S-methyltransferase; KEGG: bth:BT_1409 hypothetical protein; homocysteine S-methyltransferase 3127087 5293889 Cbei_2691 Clostridium beijerinckii NCIMB 8052 homocysteine S-methyltransferase YP_001309800.1 3126155 R 290402 CDS YP_001309801.1 150017547 5293890 complement(3127244..3127507) 1 NC_009617.1 hypothetical protein 3127507 5293890 Cbei_2692 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309801.1 3127244 R 290402 CDS YP_001309802.1 150017548 5293891 complement(3127788..3128477) 1 NC_009617.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mba:Mbar_A0557 haloacid dehalogenase-like hydrolase family protein; HAD family hydrolase 3128477 5293891 Cbei_2693 Clostridium beijerinckii NCIMB 8052 HAD family hydrolase YP_001309802.1 3127788 R 290402 CDS YP_001309803.1 150017549 5293892 complement(3128508..3128732) 1 NC_009617.1 hypothetical protein 3128732 5293892 Cbei_2694 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309803.1 3128508 R 290402 CDS YP_001309804.1 150017550 5296381 complement(3129213..3129557) 1 NC_009617.1 KEGG: mba:Mbar_A2331 hypothetical protein; hypothetical protein 3129557 5296381 Cbei_2696 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309804.1 3129213 R 290402 CDS YP_001309805.1 150017551 5293894 complement(3129592..3130086) 1 NC_009617.1 KEGG: ljo:LJ1221 hypothetical protein; hypothetical protein 3130086 5293894 Cbei_2697 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309805.1 3129592 R 290402 CDS YP_001309806.1 150017552 5293895 complement(3130393..3130785) 1 NC_009617.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: tde:TDE1774 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 3130785 5293895 Cbei_2698 Clostridium beijerinckii NCIMB 8052 glyoxalase/bleomycin resistance protein/dioxygenase YP_001309806.1 3130393 R 290402 CDS YP_001309807.1 150017553 5293896 complement(3131113..3132255) 1 NC_009617.1 KEGG: pfa:PF14_0250 hypothetical protein; hypothetical protein 3132255 5293896 Cbei_2699 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309807.1 3131113 R 290402 CDS YP_001309808.1 150017554 5293897 complement(3132242..3132733) 1 NC_009617.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: ctc:CTC00553 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 factor 3132733 5293897 Cbei_2700 Clostridium beijerinckii NCIMB 8052 ECF subfamily RNA polymerase sigma-24 factor YP_001309808.1 3132242 R 290402 CDS YP_001309809.1 150017555 5293898 complement(3133310..3134482) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; copper amine oxidase domain protein; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; cell wall binding repeat-containing protein 3134482 5293898 Cbei_2701 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001309809.1 3133310 R 290402 CDS YP_001309810.1 150017556 5293899 complement(3134926..3136182) 1 NC_009617.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dsy:DSY3360 hypothetical protein; RND family efflux transporter MFP subunit 3136182 5293899 Cbei_2702 Clostridium beijerinckii NCIMB 8052 RND family efflux transporter MFP subunit YP_001309810.1 3134926 R 290402 CDS YP_001309811.1 150017557 5293900 complement(3136172..3139345) 1 NC_009617.1 PFAM: acriflavin resistance protein; KEGG: chu:CHU_2809 cation efflux protein; acriflavin resistance protein 3139345 5293900 Cbei_2703 Clostridium beijerinckii NCIMB 8052 acriflavin resistance protein YP_001309811.1 3136172 R 290402 CDS YP_001309812.1 150017558 5293901 complement(3140095..3140694) 1 NC_009617.1 PFAM: RDD domain containing protein; RDD domain-containing protein 3140694 5293901 Cbei_2704 Clostridium beijerinckii NCIMB 8052 RDD domain-containing protein YP_001309812.1 3140095 R 290402 CDS YP_001309813.1 150017559 5293902 complement(3140707..3141888) 1 NC_009617.1 PFAM: aminotransferase, class I and II; KEGG: efa:EF0029 aminotransferase, class II; class I and II aminotransferase 3141888 5293902 Cbei_2705 Clostridium beijerinckii NCIMB 8052 class I and II aminotransferase YP_001309813.1 3140707 R 290402 CDS YP_001309814.1 150017560 5293903 complement(3141889..3142977) 1 NC_009617.1 PFAM: creatinase; peptidase M24; KEGG: ser:SERP1094 proline dipeptidase; peptidase M24 3142977 5293903 Cbei_2706 Clostridium beijerinckii NCIMB 8052 peptidase M24 YP_001309814.1 3141889 R 290402 CDS YP_001309815.1 150017561 5293904 complement(3143104..3144417) 1 NC_009617.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system, EIIC; KEGG: lmf:LMOf2365_0895 PTS system, beta-glucoside-specific, IIC component; PTS system lactose/cellobiose family transporter subunit IIC 3144417 5293904 Cbei_2707 Clostridium beijerinckii NCIMB 8052 PTS system lactose/cellobiose family transporter subunit IIC YP_001309815.1 3143104 R 290402 CDS YP_001309816.1 150017562 5293905 complement(3144430..3144768) 1 NC_009617.1 PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: lin:lin0873 similar to PTS system, beta-glucoside enzyme IIB component; phosphotransferase system, lactose/cellobiose-specific IIB subunit 3144768 5293905 Cbei_2708 Clostridium beijerinckii NCIMB 8052 phosphotransferase system, lactose/cellobiose-specific IIB subunit YP_001309816.1 3144430 R 290402 CDS YP_001309817.1 150017563 5293906 complement(3144770..3145093) 1 NC_009617.1 PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: vfi:VF0607 PTS system, diacetylchitobiose-specific IIA component; PTS system lactose/cellobiose-specific transporter subunit IIA 3145093 5293906 Cbei_2709 Clostridium beijerinckii NCIMB 8052 PTS system lactose/cellobiose-specific transporter subunit IIA YP_001309817.1 3144770 R 290402 CDS YP_001309818.1 150017564 5293907 complement(3145086..3146147) 1 NC_009617.1 metalloprotein; exoaminopeptidase 3146147 5293907 Cbei_2710 Clostridium beijerinckii NCIMB 8052 exoaminopeptidase YP_001309818.1 3145086 R 290402 CDS YP_001309819.1 150017565 5293908 complement(3146140..3148047) 1 NC_009617.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PRD domain protein; Helix-turn-helix, type 11 domain protein; KEGG: btl:BALH_0718 transcription antiterminator, BglG family; transcriptional antiterminator BglG 3148047 5293908 Cbei_2711 Clostridium beijerinckii NCIMB 8052 transcriptional antiterminator BglG YP_001309819.1 3146140 R 290402 CDS YP_001309820.1 150017566 5293909 3148622..3149782 1 NC_009617.1 KEGG: cpr:CPR_0878 FliB family protein; FliB family protein 3149782 5293909 Cbei_2712 Clostridium beijerinckii NCIMB 8052 FliB family protein YP_001309820.1 3148622 D 290402 CDS YP_001309821.1 150017567 5296382 complement(3150521..3151966) 1 NC_009617.1 KEGG: cac:CAC1028 hydrolase of alpha/beta superfamily, possible membrane associated lipase; alpha/beta fold family hydrolase 3151966 5296382 Cbei_2714 Clostridium beijerinckii NCIMB 8052 alpha/beta fold family hydrolase YP_001309821.1 3150521 R 290402 CDS YP_001309822.1 150017568 5293911 complement(3152535..3152822) 1 NC_009617.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: syg:sync_2670 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 3152822 5293911 Cbei_2715 Clostridium beijerinckii NCIMB 8052 antibiotic biosynthesis monooxygenase YP_001309822.1 3152535 R 290402 CDS YP_001309823.1 150017569 5293912 3153069..3153407 1 NC_009617.1 hypothetical protein 3153407 5293912 Cbei_2716 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309823.1 3153069 D 290402 CDS YP_001309824.1 150017570 5293913 complement(3153886..3154341) 1 NC_009617.1 PFAM: transcription activator, effector binding; KEGG: cac:CAC3490 DNA gyrase inhibitory protein, GyrI; transcription activator, effector binding 3154341 5293913 Cbei_2717 Clostridium beijerinckii NCIMB 8052 transcription activator, effector binding YP_001309824.1 3153886 R 290402 CDS YP_001309825.1 150017571 5293914 complement(3154427..3154885) 1 NC_009617.1 KEGG: fnu:FN0643 hypothetical protein; hypothetical protein 3154885 5293914 Cbei_2718 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309825.1 3154427 R 290402 CDS YP_001309826.1 150017572 5293915 complement(3154948..3155568) 1 NC_009617.1 KEGG: smu:SMU.1470c hypothetical protein; hypothetical protein 3155568 5293915 Cbei_2719 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309826.1 3154948 R 290402 CDS YP_001309827.1 150017573 5293916 complement(3155643..3156446) 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cpr:CPR_2063 polyferredoxin; 4Fe-4S ferredoxin 3156446 5293916 Cbei_2720 Clostridium beijerinckii NCIMB 8052 4Fe-4S ferredoxin YP_001309827.1 3155643 R 290402 CDS YP_001309828.1 150017574 5293917 complement(3156572..3156979) 1 NC_009617.1 PFAM: regulatory protein, MerR; KEGG: gka:GK3095 transcriptional regulator involved in mercury resistance operon; MerR family transcriptional regulator 3156979 5293917 Cbei_2721 Clostridium beijerinckii NCIMB 8052 MerR family transcriptional regulator YP_001309828.1 3156572 R 290402 CDS YP_001309829.1 150017575 5293918 complement(3157392..3157754) 1 NC_009617.1 PFAM: protein of unknown function DUF1232; KEGG: cac:CAC1011 uncharacterized small membrane protein, homolog of ykvA B.subtilis; hypothetical protein 3157754 5293918 Cbei_2722 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309829.1 3157392 R 290402 CDS YP_001309830.1 150017576 5293919 complement(3157931..3158962) 1 NC_009617.1 PFAM: helix-turn-helix domain protein; KEGG: ctc:CTC00641 transcriptional regulatory protein; XRE family transcriptional regulator 3158962 5293919 Cbei_2723 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001309830.1 3157931 R 290402 CDS YP_001309831.1 150017577 5293920 complement(3159428..3161665) 1 NC_009617.1 KEGG: bcz:BCZK0951 ATP-dependent DNA helicase replicase; ATP-dependent DNA helicase replicase 3161665 5293920 Cbei_2724 Clostridium beijerinckii NCIMB 8052 ATP-dependent DNA helicase replicase YP_001309831.1 3159428 R 290402 CDS YP_001309832.1 150017578 5293921 complement(3161977..3163248) 1 NC_009617.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; KEGG: ana:all0637 two-component hybrid sensor and regulator; response regulator receiver sensor signal transduction histidine kinase 3163248 5293921 Cbei_2725 Clostridium beijerinckii NCIMB 8052 response regulator receiver sensor signal transduction histidine kinase YP_001309832.1 3161977 R 290402 CDS YP_001309833.1 150017579 5293922 complement(3163261..3164286) 1 NC_009617.1 PFAM: response regulator receiver; KEGG: vch:VC1087 response regulator; response regulator receiver protein 3164286 5293922 Cbei_2726 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001309833.1 3163261 R 290402 CDS YP_001309834.1 150017580 5293923 complement(3164288..3165463) 1 NC_009617.1 PFAM: response regulator receiver; Metal-dependent hydrolase HDOD; KEGG: dvl:Dvul_2652 response regulator receiver modulated metal dependent phosphohydrolase; signal transduction protein 3165463 5293923 Cbei_2727 Clostridium beijerinckii NCIMB 8052 signal transduction protein YP_001309834.1 3164288 R 290402 CDS YP_001309835.1 150017581 5293924 complement(3165456..3166757) 1 NC_009617.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; SMART: PAS domain containing protein; KEGG: hch:HCH_00674 signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase 3166757 5293924 Cbei_2728 Clostridium beijerinckii NCIMB 8052 PAS/PAC sensor signal transduction histidine kinase YP_001309835.1 3165456 R 290402 CDS YP_001309836.1 150017582 5293925 complement(3167312..3167680) 1 NC_009617.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: pna:Pnap_2188 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 3167680 5293925 Cbei_2729 Clostridium beijerinckii NCIMB 8052 carboxymuconolactone decarboxylase YP_001309836.1 3167312 R 290402 CDS YP_001309837.1 150017583 5293926 complement(3167685..3169316) 1 NC_009617.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein, central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bcl:ABC2009 acetolactate synthase large subunit; thiamine pyrophosphate protein, central region 3169316 5293926 Cbei_2730 Clostridium beijerinckii NCIMB 8052 thiamine pyrophosphate protein, central region YP_001309837.1 3167685 R 290402 CDS YP_001309838.1 150017584 5293927 complement(3169448..3171391) 1 NC_009617.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cno:NT01CX_0026 2,4-dienoyl-CoA reductase; NADH:flavin oxidoreductase 3171391 5293927 Cbei_2731 Clostridium beijerinckii NCIMB 8052 NADH:flavin oxidoreductase YP_001309838.1 3169448 R 290402 CDS YP_001309839.1 150017585 5293928 complement(3171517..3172956) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cth:Cthe_0511 histidine kinase; histidine kinase 3172956 5293928 Cbei_2732 Clostridium beijerinckii NCIMB 8052 histidine kinase YP_001309839.1 3171517 R 290402 CDS YP_001309840.1 150017586 5293929 3173828..3175102 1 NC_009617.1 KEGG: cpf:CPF_0713 hypothetical protein; hypothetical protein 3175102 5293929 Cbei_2733 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309840.1 3173828 D 290402 CDS YP_001309841.1 150017587 5293930 complement(3175276..3175617) 1 NC_009617.1 PFAM: helix-turn-helix, HxlR type; KEGG: bld:BLi00585 hypothetical protein; HxlR family transcriptional regulator 3175617 5293930 Cbei_2734 Clostridium beijerinckii NCIMB 8052 HxlR family transcriptional regulator YP_001309841.1 3175276 R 290402 CDS YP_001309842.1 150017588 5293931 3175749..3176396 1 NC_009617.1 PFAM: NADPH-dependent FMN reductase; KEGG: mma:MM3119 iron-sulfur flavoprotein; NADPH-dependent FMN reductase 3176396 5293931 Cbei_2735 Clostridium beijerinckii NCIMB 8052 NADPH-dependent FMN reductase YP_001309842.1 3175749 D 290402 CDS YP_001309843.1 150017589 5293932 complement(3176508..3178541) 1 NC_009617.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: bsu:BG14098 monovalent cation:proton antiporter; Na+/H+ antiporter 3178541 5293932 Cbei_2736 Clostridium beijerinckii NCIMB 8052 Na+/H+ antiporter YP_001309843.1 3176508 R 290402 CDS YP_001309844.1 150017590 5293933 complement(3178766..3180235) 1 NC_009617.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 3180235 5293933 Cbei_2737 Clostridium beijerinckii NCIMB 8052 leucyl aminopeptidase YP_001309844.1 3178766 R 290402 CDS YP_001309845.1 150017591 5293934 complement(3181180..3183324) 1 NC_009617.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; M trans-acting positive regulator; PRD domain protein; Helix-turn-helix, type 11 domain protein; KEGG: tte:TTE0303 phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); transcriptional antiterminator BglG 3183324 5293934 Cbei_2738 Clostridium beijerinckii NCIMB 8052 transcriptional antiterminator BglG YP_001309845.1 3181180 R 290402 CDS YP_001309846.1 150017592 5293935 complement(3183554..3184912) 1 NC_009617.1 membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC 3184912 ulaA 5293935 ulaA Clostridium beijerinckii NCIMB 8052 PTS system ascorbate-specific transporter subunit IIC YP_001309846.1 3183554 R 290402 CDS YP_001309847.1 150017593 5293936 complement(3184924..3185208) 1 NC_009617.1 PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: spb:M28_Spy1651 PTS system, IIB component; phosphotransferase system, lactose/cellobiose-specific IIB subunit 3185208 5293936 Cbei_2740 Clostridium beijerinckii NCIMB 8052 phosphotransferase system, lactose/cellobiose-specific IIB subunit YP_001309847.1 3184924 R 290402 CDS YP_001309848.1 150017594 5293937 complement(3185254..3185703) 1 NC_009617.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: tte:TTE0303 phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 3185703 5293937 Cbei_2741 Clostridium beijerinckii NCIMB 8052 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_001309848.1 3185254 R 290402 CDS YP_001309849.1 150017595 5293938 complement(3185726..3186442) 1 NC_009617.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase 3186442 5293938 Cbei_2742 Clostridium beijerinckii NCIMB 8052 translaldolase YP_001309849.1 3185726 R 290402 CDS YP_001309850.1 150017596 5293939 3186697..3187185 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dra:DR0188 hypothetical protein; N-acetyltransferase GCN5 3187185 5293939 Cbei_2743 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001309850.1 3186697 D 290402 CDS YP_001309851.1 150017597 5293940 complement(3187588..3187977) 1 NC_009617.1 hypothetical protein 3187977 5293940 Cbei_2744 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309851.1 3187588 R 290402 CDS YP_001309852.1 150017598 5293941 complement(3188000..3189622) 1 NC_009617.1 PFAM: zinc finger, SWIM domain protein; zinc finger SWIM domain-containing protein 3189622 5293941 Cbei_2745 Clostridium beijerinckii NCIMB 8052 zinc finger SWIM domain-containing protein YP_001309852.1 3188000 R 290402 CDS YP_001309853.1 150017599 5293942 complement(3189742..3190872) 1 NC_009617.1 PFAM: VWA containing CoxE family protein; KEGG: lil:LA0697 hypothetical protein; VWA containing CoxE family protein 3190872 5293942 Cbei_2746 Clostridium beijerinckii NCIMB 8052 VWA containing CoxE family protein YP_001309853.1 3189742 R 290402 CDS YP_001309854.1 150017600 5293943 complement(3191010..3193457) 1 NC_009617.1 KEGG: lil:LA0699 hypothetical protein; hypothetical protein 3193457 5293943 Cbei_2747 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309854.1 3191010 R 290402 CDS YP_001309855.1 150017601 5293944 complement(3193432..3194547) 1 NC_009617.1 PFAM: ATPase associated with various cellular activities, AAA_5; KEGG: lic:LIC12902 hypothetical protein; ATPase 3194547 5293944 Cbei_2748 Clostridium beijerinckii NCIMB 8052 ATPase YP_001309855.1 3193432 R 290402 CDS YP_001309856.1 150017602 5293945 complement(3194572..3195411) 1 NC_009617.1 KEGG: bce:BC3270 hypothetical membrane spanning protein; hypothetical protein 3195411 5293945 Cbei_2749 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309856.1 3194572 R 290402 CDS YP_001309857.1 150017603 5293946 complement(3195386..3198892) 1 NC_009617.1 KEGG: bce:BC3255 molybdate metabolism regulator; molybdate metabolism regulator 3198892 5293946 Cbei_2750 Clostridium beijerinckii NCIMB 8052 molybdate metabolism regulator YP_001309857.1 3195386 R 290402 CDS YP_001309858.1 150017604 5293947 complement(3199210..3199710) 1 NC_009617.1 hypothetical protein 3199710 5293947 Cbei_2751 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309858.1 3199210 R 290402 CDS YP_001309859.1 150017605 5293948 complement(3199775..3203170) 1 NC_009617.1 KEGG: bce:BC3255 molybdate metabolism regulator; hypothetical protein 3203170 5293948 Cbei_2752 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309859.1 3199775 R 290402 CDS YP_001309860.1 150017606 5293949 3203627..3204718 1 NC_009617.1 forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; glycerol dehydrogenase 3204718 gldA 5293949 gldA Clostridium beijerinckii NCIMB 8052 glycerol dehydrogenase YP_001309860.1 3203627 D 290402 CDS YP_001309861.1 150017607 5293950 complement(3205120..3206463) 1 NC_009617.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: bsu:BG11384 acetyl-CoA carboxylase (biotin carboxylase subunit); acetyl-CoA carboxylase, biotin carboxylase 3206463 5293950 Cbei_2754 Clostridium beijerinckii NCIMB 8052 acetyl-CoA carboxylase, biotin carboxylase YP_001309861.1 3205120 R 290402 CDS YP_001309862.1 150017608 5293951 complement(3206486..3206947) 1 NC_009617.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: lmo:lmo1356 acetyl-CoA carboxylase biotin carboxyl carrier protein; biotin/lipoyl attachment domain-containing protein 3206947 5293951 Cbei_2755 Clostridium beijerinckii NCIMB 8052 biotin/lipoyl attachment domain-containing protein YP_001309862.1 3206486 R 290402 CDS YP_001309863.1 150017609 5293952 complement(3206962..3207963) 1 NC_009617.1 TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: bld:BLi00502 KipA; urea amidolyase-like protein 3207963 5293952 Cbei_2756 Clostridium beijerinckii NCIMB 8052 urea amidolyase-like protein YP_001309863.1 3206962 R 290402 CDS YP_001309864.1 150017610 5293953 complement(3207963..3208679) 1 NC_009617.1 PFAM: Allophanate hydrolase subunit 1; KEGG: bld:BLi00501 KipI; allophanate hydrolase subunit 1 3208679 5293953 Cbei_2757 Clostridium beijerinckii NCIMB 8052 allophanate hydrolase subunit 1 YP_001309864.1 3207963 R 290402 CDS YP_001309865.1 150017611 5293954 complement(3208741..3209871) 1 NC_009617.1 TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; KEGG: cth:Cthe_2697 alanine racemase; alanine racemase 3209871 5293954 Cbei_2758 Clostridium beijerinckii NCIMB 8052 alanine racemase YP_001309865.1 3208741 R 290402 CDS YP_001309866.1 150017612 5293955 complement(3209894..3210661) 1 NC_009617.1 PFAM: LamB/YcsF family protein; KEGG: cjj:CJJ81176_1526 LamB/YcsF family protein; LamB/YcsF family protein 3210661 5293955 Cbei_2759 Clostridium beijerinckii NCIMB 8052 LamB/YcsF family protein YP_001309866.1 3209894 R 290402 CDS YP_001309867.1 150017613 5293956 complement(3210698..3211486) 1 NC_009617.1 PFAM: protein of unknown function DUF1445; KEGG: par:Psyc_1103 hypothetical protein; hypothetical protein 3211486 5293956 Cbei_2760 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309867.1 3210698 R 290402 CDS YP_001309868.1 150017614 5293957 complement(3211552..3212625) 1 NC_009617.1 KEGG: dsy:DSY4353 hypothetical protein; hypothetical protein 3212625 5293957 Cbei_2761 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309868.1 3211552 R 290402 CDS YP_001309869.1 150017615 5293958 complement(3212636..3213484) 1 NC_009617.1 PFAM: aminotransferase, class IV; KEGG: cac:CAC0792 D-amino acid aminotransferase; class IV aminotransferase 3213484 5293958 Cbei_2762 Clostridium beijerinckii NCIMB 8052 class IV aminotransferase YP_001309869.1 3212636 R 290402 CDS YP_001309870.1 150017616 5293959 complement(3213738..3214193) 1 NC_009617.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: plt:Plut_1414 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 3214193 5293959 Cbei_2763 Clostridium beijerinckii NCIMB 8052 AsnC family transcriptional regulator YP_001309870.1 3213738 R 290402 CDS YP_001309871.1 150017617 5293960 complement(3214207..3214830) 1 NC_009617.1 KEGG: bth:BT_2093 hypothetical protein; hypothetical protein 3214830 5293960 Cbei_2764 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309871.1 3214207 R 290402 CDS YP_001309872.1 150017618 5293961 complement(3214918..3215622) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: swo:Swol_2552 branched-chain amino acid ABC transporter (ATP-binding protein); ABC transporter 3215622 5293961 Cbei_2765 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001309872.1 3214918 R 290402 CDS YP_001309873.1 150017619 5293962 complement(3215624..3216394) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: spd:SPD_0655 branched-chain amino acid ABC transporter ATP-binding protein; ABC transporter 3216394 5293962 Cbei_2766 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001309873.1 3215624 R 290402 CDS YP_001309874.1 150017620 5293963 complement(3216396..3217448) 1 NC_009617.1 PFAM: inner-membrane translocator; KEGG: chy:CHY_2230 high affinity branched-chain amino acid ABC transporter permease; inner-membrane translocator 3217448 5293963 Cbei_2767 Clostridium beijerinckii NCIMB 8052 inner-membrane translocator YP_001309874.1 3216396 R 290402 CDS YP_001309875.1 150017621 5293964 complement(3217452..3218336) 1 NC_009617.1 PFAM: inner-membrane translocator; KEGG: chy:CHY_2231 high affinity branched-chain amino acid ABC transporter permease; inner-membrane translocator 3218336 5293964 Cbei_2768 Clostridium beijerinckii NCIMB 8052 inner-membrane translocator YP_001309875.1 3217452 R 290402 CDS YP_001309876.1 150017622 5293965 complement(3218440..3219621) 1 NC_009617.1 PFAM: Extracellular ligand-binding receptor; KEGG: gka:GK2980 branched chain amino acid ABC transporter (substrate-binding protein); extracellular ligand-binding receptor 3219621 5293965 Cbei_2769 Clostridium beijerinckii NCIMB 8052 extracellular ligand-binding receptor YP_001309876.1 3218440 R 290402 CDS YP_001309877.1 150017623 5293966 3220290..3221390 1 NC_009617.1 PFAM: domain of unknown function DUF1745; KEGG: ppd:Ppro_3141 domain of unknown function DUF1745; hypothetical protein 3221390 5293966 Cbei_2770 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309877.1 3220290 D 290402 CDS YP_001309878.1 150017624 5293967 3221407..3222393 1 NC_009617.1 PFAM: chemotaxis sensory transducer; KEGG: cac:CAC2483 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 3222393 5293967 Cbei_2771 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001309878.1 3221407 D 290402 CDS YP_001309879.1 150017625 5293968 3222869..3224608 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ctc:CTC02429 ABC transporter ATP-binding protein; ABC transporter 3224608 5293968 Cbei_2772 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001309879.1 3222869 D 290402 CDS YP_001309880.1 150017626 5293969 3224712..3225641 1 NC_009617.1 KEGG: ctc:CTC01798 hypothetical protein; hypothetical protein 3225641 5293969 Cbei_2773 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309880.1 3224712 D 290402 CDS YP_001309881.1 150017627 5293970 complement(3225851..3226939) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: mac:MA4292 cell surface protein; cell wall binding repeat-containing protein 3226939 5293970 Cbei_2774 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001309881.1 3225851 R 290402 CDS YP_001309882.1 150017628 5293971 3227233..3227637 1 NC_009617.1 PFAM: NUDIX hydrolase; KEGG: cno:NT01CX_2016 MutT/NUDIX family protein; NUDIX hydrolase 3227637 5293971 Cbei_2775 Clostridium beijerinckii NCIMB 8052 NUDIX hydrolase YP_001309882.1 3227233 D 290402 CDS YP_001309883.1 150017629 5293972 complement(3227742..3228416) 1 NC_009617.1 PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: mbu:Mbur_1482 nitrite and sulphite reductase, 4Fe-4S subunit; nitrite and sulfite reductase 4Fe-4S subunit 3228416 5293972 Cbei_2776 Clostridium beijerinckii NCIMB 8052 nitrite and sulfite reductase 4Fe-4S subunit YP_001309883.1 3227742 R 290402 CDS YP_001309884.1 150017630 5293973 3228735..3229484 1 NC_009617.1 PFAM: beta-lactamase domain protein; KEGG: eba:ebA6101 hypothetical protein; beta-lactamase domain-containing protein 3229484 5293973 Cbei_2777 Clostridium beijerinckii NCIMB 8052 beta-lactamase domain-containing protein YP_001309884.1 3228735 D 290402 CDS YP_001309885.1 150017631 5293974 3229515..3230258 1 NC_009617.1 PFAM: nitroreductase; KEGG: cac:CAC0718 ortholog YcnD B.subtilis, nitroreductase; nitroreductase 3230258 5293974 Cbei_2778 Clostridium beijerinckii NCIMB 8052 nitroreductase YP_001309885.1 3229515 D 290402 CDS YP_001309886.1 150017632 5293975 complement(3231015..3232460) 1 NC_009617.1 PFAM: helicase domain protein; DbpA, RNA-binding domain protein; type III restriction protein, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: bce:BC5451 ATP-dependent RNA helicase; DEAD/DEAH box helicase 3232460 5293975 Cbei_2779 Clostridium beijerinckii NCIMB 8052 DEAD/DEAH box helicase YP_001309886.1 3231015 R 290402 CDS YP_001309887.1 150017633 5293976 complement(3232688..3233557) 1 NC_009617.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: lwe:lwe0631 hydrolase, Cof family; cof family hydrolase 3233557 5293976 Cbei_2780 Clostridium beijerinckii NCIMB 8052 cof family hydrolase YP_001309887.1 3232688 R 290402 CDS YP_001309888.1 150017634 5293977 complement(3233600..3235003) 1 NC_009617.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: spd:SPD_1738 MATE efflux family protein DinF; MATE efflux family protein 3235003 5293977 Cbei_2781 Clostridium beijerinckii NCIMB 8052 MATE efflux family protein YP_001309888.1 3233600 R 290402 CDS YP_001309889.1 150017635 5293978 complement(3235380..3235667) 1 NC_009617.1 KEGG: dsy:DSY3615 hypothetical protein; hypothetical protein 3235667 5293978 Cbei_2782 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309889.1 3235380 R 290402 CDS YP_001309890.1 150017636 5293979 complement(3235707..3236177) 1 NC_009617.1 PFAM: response regulator receiver; KEGG: dsy:DSY3627 hypothetical protein; response regulator receiver protein 3236177 5293979 Cbei_2783 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001309890.1 3235707 R 290402 CDS YP_001309891.1 150017637 5293980 complement(3236966..3237229) 1 NC_009617.1 hypothetical protein 3237229 5293980 Cbei_2784 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309891.1 3236966 R 290402 CDS YP_001309892.1 150017638 5296383 complement(3237755..3239326) 1 NC_009617.1 KEGG: cno:NT01CX_0224 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 3239326 5296383 Cbei_2786 Clostridium beijerinckii NCIMB 8052 PAS/PAC sensor signal transduction histidine kinase YP_001309892.1 3237755 R 290402 CDS YP_001309893.1 150017639 5293982 complement(3239684..3241405) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01881 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 3241405 5293982 Cbei_2787 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001309893.1 3239684 R 290402 CDS YP_001309894.1 150017640 5293983 3241890..3242099 1 NC_009617.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: cpf:CPF_1452 cold shock protein; cold-shock DNA-binding domain-containing protein 3242099 5293983 Cbei_2788 Clostridium beijerinckii NCIMB 8052 cold-shock DNA-binding domain-containing protein YP_001309894.1 3241890 D 290402 CDS YP_001309895.1 150017641 5293984 complement(3242272..3243225) 1 NC_009617.1 TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; KEGG: fnu:FN1169 L-lactate dehydrogenase; L-lactate dehydrogenase 3243225 5293984 Cbei_2789 Clostridium beijerinckii NCIMB 8052 L-lactate dehydrogenase YP_001309895.1 3242272 R 290402 CDS YP_001309896.1 150017642 5293985 complement(3243320..3244339) 1 NC_009617.1 PFAM: protein of unknown function DUF534; KEGG: swo:Swol_0325 hypothetical protein; hypothetical protein 3244339 5293985 Cbei_2790 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309896.1 3243320 R 290402 CDS YP_001309897.1 150017643 5293986 complement(3244516..3245220) 1 NC_009617.1 hypothetical protein 3245220 5293986 Cbei_2791 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309897.1 3244516 R 290402 CDS YP_001309898.1 150017644 5293987 complement(3245611..3245928) 1 NC_009617.1 PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: bat:BAS3518 hypothetical protein; MazG nucleotide pyrophosphohydrolase 3245928 5293987 Cbei_2792 Clostridium beijerinckii NCIMB 8052 MazG nucleotide pyrophosphohydrolase YP_001309898.1 3245611 R 290402 CDS YP_001309899.1 150017645 5293988 3246667..3248400 1 NC_009617.1 PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_1777 ABC transporter permease/ATP-binding protein; ABC transporter 3248400 5293988 Cbei_2793 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001309899.1 3246667 D 290402 CDS YP_001309900.1 150017646 5293989 3248402..3250171 1 NC_009617.1 PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_1776 ABC transporter permease/ATP-binding protein; ABC transporter 3250171 5293989 Cbei_2794 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001309900.1 3248402 D 290402 CDS YP_001309901.1 150017647 5293990 complement(3250427..3251968) 1 NC_009617.1 KEGG: ctc:CTC01462 hypothetical protein; hypothetical protein 3251968 5293990 Cbei_2795 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309901.1 3250427 R 290402 CDS YP_001309902.1 150017648 5293991 complement(3252259..3252741) 1 NC_009617.1 KEGG: cff:CFF8240_1263 Mug G:T/U mismatch-specific DNA glycosylase; Mug G:T/U mismatch-specific DNA glycosylase 3252741 5293991 Cbei_2796 Clostridium beijerinckii NCIMB 8052 Mug G:T/U mismatch-specific DNA glycosylase YP_001309902.1 3252259 R 290402 CDS YP_001309903.1 150017649 5293992 complement(3253274..3253930) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: mac:MA4292 cell surface protein; cell wall binding repeat-containing protein 3253930 5293992 Cbei_2797 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001309903.1 3253274 R 290402 CDS YP_001309904.1 150017650 5293993 complement(3254180..3254809) 1 NC_009617.1 PFAM: Phosphoglycerate mutase; KEGG: cno:NT01CX_2076 phosphoglycerate mutase family protein; phosphoglycerate mutase 3254809 5293993 Cbei_2798 Clostridium beijerinckii NCIMB 8052 phosphoglycerate mutase YP_001309904.1 3254180 R 290402 CDS YP_001309905.1 150017651 5293994 complement(3255175..3256356) 1 NC_009617.1 KEGG: chy:CHY_1717 hypothetical protein; hypothetical protein 3256356 5293994 Cbei_2799 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309905.1 3255175 R 290402 CDS YP_001309906.1 150017652 5293995 complement(3256343..3259597) 1 NC_009617.1 KEGG: chy:CHY_1718 MukB N-terminal domain/M protein repeat protein; M protein-like MukB domain-containing protein 3259597 5293995 Cbei_2800 Clostridium beijerinckii NCIMB 8052 M protein-like MukB domain-containing protein YP_001309906.1 3256343 R 290402 CDS YP_001309907.1 150017653 5293996 complement(3259572..3260177) 1 NC_009617.1 KEGG: chy:CHY_1719 hypothetical protein; hypothetical protein 3260177 5293996 Cbei_2801 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309907.1 3259572 R 290402 CDS YP_001309908.1 150017654 5293997 complement(3260180..3261571) 1 NC_009617.1 KEGG: chy:CHY_1720 hypothetical protein; hypothetical protein 3261571 5293997 Cbei_2802 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309908.1 3260180 R 290402 CDS YP_001309909.1 150017655 5293998 complement(3262303..3262992) 1 NC_009617.1 KEGG: bce:BC4454 hypothetical protein; hypothetical protein 3262992 5293998 Cbei_2803 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309909.1 3262303 R 290402 CDS YP_001309910.1 150017656 5293999 3263413..3264714 1 NC_009617.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: dsy:DSY3551 hypothetical protein; transposase IS116/IS110/IS902 family protein 3264714 5293999 Cbei_2804 Clostridium beijerinckii NCIMB 8052 transposase IS116/IS110/IS902 family protein YP_001309910.1 3263413 D 290402 CDS YP_001309911.1 150017657 5294000 complement(3265196..3267052) 1 NC_009617.1 KEGG: sdn:Sden_3579 hypothetical protein; hypothetical protein 3267052 5294000 Cbei_2805 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309911.1 3265196 R 290402 CDS YP_001309912.1 150017658 5294001 complement(3267053..3268246) 1 NC_009617.1 KEGG: sdn:Sden_3581 hypothetical protein; hypothetical protein 3268246 5294001 Cbei_2806 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309912.1 3267053 R 290402 CDS YP_001309913.1 150017659 5294002 complement(3268352..3268960) 1 NC_009617.1 PFAM: Domain of unknown function DUF1863; KEGG: bce:BC4454 hypothetical protein; hypothetical protein 3268960 5294002 Cbei_2807 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309913.1 3268352 R 290402 CDS YP_001309914.1 150017660 5294003 complement(3269030..3270466) 1 NC_009617.1 KEGG: tcx:Tcr_0373 hypothetical protein; hypothetical protein 3270466 5294003 Cbei_2808 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309914.1 3269030 R 290402 CDS YP_001309915.1 150017661 5294004 complement(3270586..3271086) 1 NC_009617.1 PFAM: Domain of unknown function DUF1863; KEGG: ajs:Ajs_2632 hypothetical protein; hypothetical protein 3271086 5294004 Cbei_2809 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309915.1 3270586 R 290402 CDS YP_001309916.1 150017662 5294005 complement(3271545..3274082) 1 NC_009617.1 PFAM: helicase domain protein; type III restriction protein, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cno:NT01CX_0321 helicase; type III restriction protein, res subunit 3274082 5294005 Cbei_2810 Clostridium beijerinckii NCIMB 8052 type III restriction protein, res subunit YP_001309916.1 3271545 R 290402 CDS YP_001309917.1 150017663 5294006 complement(3274301..3274609) 1 NC_009617.1 KEGG: ctc:CTC00658 hypothetical protein; hypothetical protein 3274609 5294006 Cbei_2811 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309917.1 3274301 R 290402 CDS YP_001309918.1 150017664 5294007 complement(3274681..3275310) 1 NC_009617.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cvi:CV1741 hypothetical protein; type 11 methyltransferase 3275310 5294007 Cbei_2812 Clostridium beijerinckii NCIMB 8052 type 11 methyltransferase YP_001309918.1 3274681 R 290402 CDS YP_001309919.1 150017665 5294008 complement(3275557..3275979) 1 NC_009617.1 hypothetical protein 3275979 5294008 Cbei_2813 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309919.1 3275557 R 290402 CDS YP_001309920.1 150017666 5296384 complement(3276948..3277760) 1 NC_009617.1 TIGRFAM: phage replisome organizer, KEGG: sac:SACOL0341 hypothetical protein; phage replisome organizer 3277760 5296384 Cbei_2815 Clostridium beijerinckii NCIMB 8052 phage replisome organizer YP_001309920.1 3276948 R 290402 CDS YP_001309921.1 150017667 5294010 complement(3278364..3279257) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; transcription activator, effector binding; KEGG: dsy:DSY2799 hypothetical protein; transcription activator, effector binding 3279257 5294010 Cbei_2816 Clostridium beijerinckii NCIMB 8052 transcription activator, effector binding YP_001309921.1 3278364 R 290402 CDS YP_001309922.1 150017668 5294011 complement(3279810..3280133) 1 NC_009617.1 KEGG: bat:BAS1975 hypothetical protein; hypothetical protein 3280133 5294011 Cbei_2817 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309922.1 3279810 R 290402 CDS YP_001309923.1 150017669 5294012 3280439..3281125 1 NC_009617.1 KEGG: rno:683977 hypothetical protein LOC683977; hypothetical protein 3281125 5294012 Cbei_2818 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309923.1 3280439 D 290402 CDS YP_001309924.1 150017670 5294013 complement(3281285..3282181) 1 NC_009617.1 KEGG: lsl:LSL_0951 hypothetical protein; hypothetical protein 3282181 5294013 Cbei_2819 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309924.1 3281285 R 290402 CDS YP_001309925.1 150017671 5294014 complement(3282516..3283466) 1 NC_009617.1 PFAM: elongation factor G, domain IV; KEGG: cth:Cthe_2729 translation elongation factor G; elongation factor G domain-containing protein 3283466 5294014 Cbei_2820 Clostridium beijerinckii NCIMB 8052 elongation factor G domain-containing protein YP_001309925.1 3282516 R 290402 CDS YP_001309926.1 150017672 5294015 complement(3283501..3283917) 1 NC_009617.1 hypothetical protein 3283917 5294015 Cbei_2821 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309926.1 3283501 R 290402 CDS YP_001309927.1 150017673 5294016 complement(3284063..3285235) 1 NC_009617.1 hypothetical protein 3285235 5294016 Cbei_2822 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309927.1 3284063 R 290402 CDS YP_001309928.1 150017674 5294017 complement(3285597..3286169) 1 NC_009617.1 TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; KEGG: vfi:VFA0815 DNA-3-methyladenine glycosylase; DNA-3-methyladenine glycosylase I 3286169 5294017 Cbei_2823 Clostridium beijerinckii NCIMB 8052 DNA-3-methyladenine glycosylase I YP_001309928.1 3285597 R 290402 CDS YP_001309929.1 150017675 5294018 complement(3286346..3287665) 1 NC_009617.1 PFAM: NERD domain protein; KEGG: ssa:SSA_0274 hypothetical protein; NERD domain-containing protein 3287665 5294018 Cbei_2824 Clostridium beijerinckii NCIMB 8052 NERD domain-containing protein YP_001309929.1 3286346 R 290402 CDS YP_001309930.1 150017676 5294019 3288357..3290126 1 NC_009617.1 SMART: beta and gamma crystallin; KEGG: mva:Mvan_4739 hypothetical protein; beta and gamma crystallin 3290126 5294019 Cbei_2825 Clostridium beijerinckii NCIMB 8052 beta and gamma crystallin YP_001309930.1 3288357 D 290402 CDS YP_001309931.1 150017677 5294020 complement(3290315..3291424) 1 NC_009617.1 PFAM: Carbohydrate-binding family V/XII; KEGG: sco:SCO5673 secreted chitinase; carbohydrate-binding family V/XII protein 3291424 5294020 Cbei_2826 Clostridium beijerinckii NCIMB 8052 carbohydrate-binding family V/XII protein YP_001309931.1 3290315 R 290402 CDS YP_001309932.1 150017678 5296385 complement(3292188..3293420) 1 NC_009617.1 PFAM: glycoside hydrolase, family 16; Carbohydrate-binding family V/XII; Fibronectin, type III domain protein; KEGG: sus:Acid_2816 glycoside hydrolase, family 16; glycoside hydrolase 3293420 5296385 Cbei_2828 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001309932.1 3292188 R 290402 CDS YP_001309933.1 150017679 5294022 complement(3293714..3294466) 1 NC_009617.1 Heat shock-induced; RNA polymerase sigma factor SigI 3294466 5294022 Cbei_2829 Clostridium beijerinckii NCIMB 8052 RNA polymerase sigma factor SigI YP_001309933.1 3293714 R 290402 CDS YP_001309934.1 150017680 5294023 3294950..3296749 1 NC_009617.1 PFAM: glycoside hydrolase, family 18; Carbohydrate-binding family V/XII; SMART: chitinase II; KEGG: cth:Cthe_0270 glycoside hydrolase, family 18; glycoside hydrolase 3296749 5294023 Cbei_2830 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001309934.1 3294950 D 290402 CDS YP_001309935.1 150017681 5294024 3296824..3297759 1 NC_009617.1 PFAM: Carbohydrate-binding family V/XII; Lytic transglycosylase, catalytic; KEGG: ftl:FTL_1635 chitinase, fragment; carbohydrate-binding family V/XII protein 3297759 5294024 Cbei_2831 Clostridium beijerinckii NCIMB 8052 carbohydrate-binding family V/XII protein YP_001309935.1 3296824 D 290402 CDS YP_001309936.1 150017682 5294025 complement(3298128..3299543) 1 NC_009617.1 PFAM: glycoside hydrolase, family 1; KEGG: cac:CAC0743 6-phospho-beta-glucosidase; glycoside hydrolase 3299543 5294025 Cbei_2832 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001309936.1 3298128 R 290402 CDS YP_001309937.1 150017683 5294026 complement(3299844..3301736) 1 NC_009617.1 TIGRFAM: PTS system, glucose subfamily, IIA subunit; PTS system, beta-glucoside-specific IIABC subunit; PFAM: sugar-specific permease, EIIA 1 domain; phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: spd:SPD_0502 PTS system, beta-glucosides-specific IIABC components; PTS system beta-glucoside-specific transporter subunit IIABC 3301736 5294026 Cbei_2833 Clostridium beijerinckii NCIMB 8052 PTS system beta-glucoside-specific transporter subunit IIABC YP_001309937.1 3299844 R 290402 CDS YP_001309938.1 150017684 5294027 complement(3302027..3302866) 1 NC_009617.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: bld:BLi04201 transcriptional antiterminator required for substrate-dependent induction and catabolite repression of bglPH; RBL02059; transcriptional antiterminator BglG 3302866 5294027 Cbei_2834 Clostridium beijerinckii NCIMB 8052 transcriptional antiterminator BglG YP_001309938.1 3302027 R 290402 CDS YP_001309939.1 150017685 5294028 complement(3303320..3303877) 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: bca:BCE_1210 transcriptional regulator, TetR family; TetR family transcriptional regulator 3303877 5294028 Cbei_2835 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001309939.1 3303320 R 290402 CDS YP_001309940.1 150017686 5294029 3304065..3304847 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mla:Mlab_0618 hypothetical protein; 4Fe-4S ferredoxin 3304847 5294029 Cbei_2836 Clostridium beijerinckii NCIMB 8052 4Fe-4S ferredoxin YP_001309940.1 3304065 D 290402 CDS YP_001309941.1 150017687 5294030 complement(3305035..3306312) 1 NC_009617.1 PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: mgm:Mmc1_2928 plasmid pRiA4b ORF-3 family protein; plasmid pRiA4b ORF-3 family protein 3306312 5294030 Cbei_2837 Clostridium beijerinckii NCIMB 8052 plasmid pRiA4b ORF-3 family protein YP_001309941.1 3305035 R 290402 CDS YP_001309942.1 150017688 5294031 3306534..3307007 1 NC_009617.1 PFAM: regulatory protein, MarR; ArsR family transcriptional regulator; KEGG: bcz:BCZK3880 transcriptional regulator, MarR family; MarR family transcriptional regulator 3307007 5294031 Cbei_2838 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001309942.1 3306534 D 290402 CDS YP_001309943.1 150017689 5294032 3307030..3309024 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC00924 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 3309024 5294032 Cbei_2839 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001309943.1 3307030 D 290402 CDS YP_001309944.1 150017690 5294033 3309075..3309839 1 NC_009617.1 PFAM: Extradiol ring-cleavage dioxygenase, class III protein, subunit B; KEGG: bce:BC1787 hypothetical protein; extradiol ring-cleavage dioxygenase III subunit B 3309839 5294033 Cbei_2840 Clostridium beijerinckii NCIMB 8052 extradiol ring-cleavage dioxygenase III subunit B YP_001309944.1 3309075 D 290402 CDS YP_001309945.1 150017691 5294034 complement(3310074..3310736) 1 NC_009617.1 PFAM: SCP-like extracellular; KEGG: bld:BLi01607 YkwD; SCP-like extracellular protein 3310736 5294034 Cbei_2841 Clostridium beijerinckii NCIMB 8052 SCP-like extracellular protein YP_001309945.1 3310074 R 290402 CDS YP_001309946.1 150017692 5294035 complement(3311153..3311872) 1 NC_009617.1 KEGG: dsy:DSY2713 hypothetical protein; hypothetical protein 3311872 5294035 Cbei_2842 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309946.1 3311153 R 290402 CDS YP_001309947.1 150017693 5294036 complement(3311875..3312624) 1 NC_009617.1 KEGG: dsy:DSY2712 hypothetical protein; hypothetical protein 3312624 5294036 Cbei_2843 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309947.1 3311875 R 290402 CDS YP_001309948.1 150017694 5294037 complement(3312621..3313535) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY2711 hypothetical protein; ABC transporter 3313535 5294037 Cbei_2844 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001309948.1 3312621 R 290402 CDS YP_001309949.1 150017695 5294038 3313944..3314660 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dsy:DSY2710 hypothetical protein; two component transcriptional regulator 3314660 5294038 Cbei_2845 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001309949.1 3313944 D 290402 CDS YP_001309950.1 150017696 5294039 3314660..3316018 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: dsy:DSY2709 hypothetical protein; integral membrane sensor signal transduction histidine kinase 3316018 5294039 Cbei_2846 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001309950.1 3314660 D 290402 CDS YP_001309951.1 150017697 5294040 complement(3316021..3316389) 1 NC_009617.1 hypothetical protein 3316389 5294040 Cbei_2847 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309951.1 3316021 R 290402 CDS YP_001309952.1 150017698 5296386 complement(3317039..3318349) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01881 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 3318349 5296386 Cbei_2849 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001309952.1 3317039 R 290402 CDS YP_001309953.1 150017699 5294042 complement(3318493..3318756) 1 NC_009617.1 KEGG: cff:CFF8240_0065 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein 3318756 5294042 Cbei_2850 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis protein YP_001309953.1 3318493 R 290402 CDS YP_001309954.1 150017700 5294043 complement(3319311..3319973) 1 NC_009617.1 PFAM: SCP-like extracellular; KEGG: bld:BLi01607 YkwD; SCP-like extracellular protein 3319973 5294043 Cbei_2851 Clostridium beijerinckii NCIMB 8052 SCP-like extracellular protein YP_001309954.1 3319311 R 290402 CDS YP_001309955.1 150017701 5294044 complement(3320317..3320913) 1 NC_009617.1 PFAM: isochorismatase hydrolase; KEGG: cac:CA_P0030 isochorismatase; isochorismatase hydrolase 3320913 5294044 Cbei_2852 Clostridium beijerinckii NCIMB 8052 isochorismatase hydrolase YP_001309955.1 3320317 R 290402 CDS YP_001309956.1 150017702 5294045 complement(3320954..3322147) 1 NC_009617.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: cac:CA_P0029 permease MDR-related; major facilitator superfamily transporter 3322147 5294045 Cbei_2853 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001309956.1 3320954 R 290402 CDS YP_001309957.1 150017703 5294046 3322574..3323131 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: cac:CA_P0028 HTH transcriptional regulator TetR family; TetR family transcriptional regulator 3323131 5294046 Cbei_2854 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001309957.1 3322574 D 290402 CDS YP_001309958.1 150017704 5294047 complement(3323459..3323767) 1 NC_009617.1 KEGG: cac:CAC2823 hypothetical protein; hypothetical protein 3323767 5294047 Cbei_2855 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309958.1 3323459 R 290402 CDS YP_001309959.1 150017705 5294048 complement(3323853..3324461) 1 NC_009617.1 KEGG: bcz:BCZK2509 conserved hypothetical protein; possible phosphoribulokinase/uridine kinase family; hypothetical protein 3324461 5294048 Cbei_2856 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309959.1 3323853 R 290402 CDS YP_001309960.1 150017706 5294049 complement(3324734..3325483) 1 NC_009617.1 PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: hma:rrnAC3101 methyltransferase; type 11 methyltransferase 3325483 5294049 Cbei_2857 Clostridium beijerinckii NCIMB 8052 type 11 methyltransferase YP_001309960.1 3324734 R 290402 CDS YP_001309961.1 150017707 5294050 3326415..3326960 1 NC_009617.1 hypothetical protein 3326960 5294050 Cbei_2858 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309961.1 3326415 D 290402 CDS YP_001309962.1 150017708 5294051 complement(3327005..3329383) 1 NC_009617.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: cno:NT01CX_2348 sensory box/GGDEF family protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 3329383 5294051 Cbei_2859 Clostridium beijerinckii NCIMB 8052 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001309962.1 3327005 R 290402 CDS YP_001309963.1 150017709 5294052 complement(3329806..3330660) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: cac:CAC0720 hypothetical protein; helix-turn-helix domain-containing protein 3330660 5294052 Cbei_2860 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001309963.1 3329806 R 290402 CDS YP_001309964.1 150017710 5294053 complement(3331118..3332575) 1 NC_009617.1 KEGG: tte:TTE2242 transposase; transposase 3332575 5294053 Cbei_2861 Clostridium beijerinckii NCIMB 8052 transposase YP_001309964.1 3331118 R 290402 CDS YP_001309965.1 150017711 5294054 3332746..3333888 1 NC_009617.1 PFAM: alpha/beta hydrolase fold; Epoxide hydrolase domain protein; KEGG: bcl:ABC1387 epoxide hydrolase 1; epocide hydrolase domain-containing protein 3333888 5294054 Cbei_2862 Clostridium beijerinckii NCIMB 8052 epocide hydrolase domain-containing protein YP_001309965.1 3332746 D 290402 CDS YP_001309966.1 150017712 5294055 complement(3334083..3337169) 1 NC_009617.1 PFAM: acriflavin resistance protein; KEGG: dsy:DSY2068 hypothetical protein; acriflavin resistance protein 3337169 5294055 Cbei_2863 Clostridium beijerinckii NCIMB 8052 acriflavin resistance protein YP_001309966.1 3334083 R 290402 CDS YP_001309967.1 150017713 5294056 complement(3337183..3338391) 1 NC_009617.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cno:NT01CX_1548 HlyD family secretion protein; RND family efflux transporter MFP subunit 3338391 5294056 Cbei_2864 Clostridium beijerinckii NCIMB 8052 RND family efflux transporter MFP subunit YP_001309967.1 3337183 R 290402 CDS YP_001309968.1 150017714 5294057 complement(3338482..3339831) 1 NC_009617.1 KEGG: mcp:MCAP_0860 hypothetical protein; hypothetical protein 3339831 5294057 Cbei_2865 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309968.1 3338482 R 290402 CDS YP_001309969.1 150017715 5294058 3340022..3340603 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: sha:SH0304 hypothetical protein; TetR family transcriptional regulator 3340603 5294058 Cbei_2866 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001309969.1 3340022 D 290402 CDS YP_001309970.1 150017716 5294059 complement(3340942..3341889) 1 NC_009617.1 PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: cac:CAC3361 transcriptional regulator, LysR family; LysR family transcriptional regulator 3341889 5294059 Cbei_2867 Clostridium beijerinckii NCIMB 8052 LysR family transcriptional regulator YP_001309970.1 3340942 R 290402 CDS YP_001309971.1 150017717 5294060 complement(3342283..3343953) 1 NC_009617.1 catalyzes the condensation of two pyruvates to form acetolactate, implicated in pH homeostasis via the acetoin-2,3-butanediol pathway or in valine biosynthesis; acetolactate synthase 3343953 5294060 Cbei_2868 Clostridium beijerinckii NCIMB 8052 acetolactate synthase YP_001309971.1 3342283 R 290402 CDS YP_001309972.1 150017718 5296387 complement(3344614..3346188) 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; Substrate-binding region of ABC-type glycine betaine transport system; KEGG: cac:CAC2849 proline/glycine betaine ABC-type transport system, permease component fused to periplasmic component; glycine/betaine ABC transporter substrate-binding protein 3346188 5296387 Cbei_2870 Clostridium beijerinckii NCIMB 8052 glycine/betaine ABC transporter substrate-binding protein YP_001309972.1 3344614 R 290402 CDS YP_001309973.1 150017719 5294062 complement(3346190..3347317) 1 NC_009617.1 TIGRFAM: glycine betaine/L-proline ABC transporter ATPase subunit; PFAM: CBS domain containing protein; ABC transporter; SMART: ATPase AAA; KEGG: cno:NT01CX_0629 glycine betaine/carnitine/choline transport ATP-binding protein; glycine/betaine ABC transporter ATPase 3347317 5294062 Cbei_2871 Clostridium beijerinckii NCIMB 8052 glycine/betaine ABC transporter ATPase YP_001309973.1 3346190 R 290402 CDS YP_001309974.1 150017720 5294063 complement(3347680..3348306) 1 NC_009617.1 PFAM: GntR family transcriptional regulator; TrkA-C domain protein; KEGG: efa:EF2640 transcriptional regulator, GntR family; TrkA domain-containing protein 3348306 5294063 Cbei_2872 Clostridium beijerinckii NCIMB 8052 TrkA domain-containing protein YP_001309974.1 3347680 R 290402 CDS YP_001309975.1 150017721 5294064 complement(3348525..3349460) 1 NC_009617.1 PFAM: polysaccharide deacetylase; KEGG: cpr:CPR_0810 polysaccharide deacetylase family protein; polysaccharide deacetylase 3349460 5294064 Cbei_2873 Clostridium beijerinckii NCIMB 8052 polysaccharide deacetylase YP_001309975.1 3348525 R 290402 CDS YP_001309976.1 150017722 5294065 complement(3350389..3351726) 1 NC_009617.1 KEGG: ayw:AYWB_353 hypothetical protein; hypothetical protein 3351726 5294065 Cbei_2874 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309976.1 3350389 R 290402 CDS YP_001309977.1 150017723 5294066 complement(3352623..3355748) 1 NC_009617.1 PFAM: acriflavin resistance protein; KEGG: cvi:CV3924 probable transmembrane drug efflux protein; acriflavin resistance protein 3355748 5294066 Cbei_2875 Clostridium beijerinckii NCIMB 8052 acriflavin resistance protein YP_001309977.1 3352623 R 290402 CDS YP_001309978.1 150017724 5294067 complement(3355748..3356845) 1 NC_009617.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dar:Daro_3760 secretion protein HlyD; RND family efflux transporter MFP subunit 3356845 5294067 Cbei_2876 Clostridium beijerinckii NCIMB 8052 RND family efflux transporter MFP subunit YP_001309978.1 3355748 R 290402 CDS YP_001309979.1 150017725 5294068 3357007..3357570 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: blo:BL0061 possible TetR-type transcriptional regulator; TetR family transcriptional regulator 3357570 5294068 Cbei_2877 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001309979.1 3357007 D 290402 CDS YP_001309980.1 150017726 5294069 complement(3357710..3358579) 1 NC_009617.1 KEGG: cac:CAC0757 predicted membrane protein; hypothetical protein 3358579 5294069 Cbei_2878 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309980.1 3357710 R 290402 CDS YP_001309981.1 150017727 5294070 complement(3359361..3360818) 1 NC_009617.1 KEGG: tte:TTE2242 transposase; transposase 3360818 5294070 Cbei_2879 Clostridium beijerinckii NCIMB 8052 transposase YP_001309981.1 3359361 R 290402 CDS YP_001309982.1 150017728 5294071 3360990..3361880 1 NC_009617.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: bxe:Bxe_B0546 epimerase/dehydratase; NAD-dependent epimerase/dehydratase 3361880 5294071 Cbei_2880 Clostridium beijerinckii NCIMB 8052 NAD-dependent epimerase/dehydratase YP_001309982.1 3360990 D 290402 CDS YP_001309983.1 150017729 5294072 complement(3362003..3363112) 1 NC_009617.1 PFAM: aldo/keto reductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cac:CAC0767 Fe-S oxidoreductase; aldo/keto reductase 3363112 5294072 Cbei_2881 Clostridium beijerinckii NCIMB 8052 aldo/keto reductase YP_001309983.1 3362003 R 290402 CDS YP_001309984.1 150017730 5294073 3363837..3364484 1 NC_009617.1 PFAM: protein of unknown function DUF1121; KEGG: cth:Cthe_0762 protein of unknown function DUF1121; hypothetical protein 3364484 5294073 Cbei_2882 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001309984.1 3363837 D 290402 CDS YP_001309985.1 150017731 5294074 complement(3365306..3366445) 1 NC_009617.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: cpr:CPR_2286 butyryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 3366445 5294074 Cbei_2883 Clostridium beijerinckii NCIMB 8052 acyl-CoA dehydrogenase domain-containing protein YP_001309985.1 3365306 R 290402 CDS YP_001309986.1 150017732 5294075 complement(3366532..3367959) 1 NC_009617.1 PFAM: FAD linked oxidase domain protein; KEGG: fnu:FN1536 (S)-2-hydroxy-acid oxidase chain D; FAD linked oxidase domain-containing protein 3367959 5294075 Cbei_2884 Clostridium beijerinckii NCIMB 8052 FAD linked oxidase domain-containing protein YP_001309986.1 3366532 R 290402 CDS YP_001309987.1 150017733 5294076 complement(3368164..3369627) 1 NC_009617.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: cno:NT01CX_1609 L-lactate permease; L-lactate transport 3369627 5294076 Cbei_2885 Clostridium beijerinckii NCIMB 8052 L-lactate transport YP_001309987.1 3368164 R 290402 CDS YP_001309988.1 150017734 5294077 complement(3369998..3370936) 1 NC_009617.1 PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; Electron transfer flavoprotein, alpha subunit-like; KEGG: fnu:FN1533 electron transfer flavoprotein alpha-subunit; electron transfer flavoprotein subunit alpha-like protein 3370936 5294077 Cbei_2886 Clostridium beijerinckii NCIMB 8052 electron transfer flavoprotein subunit alpha-like protein YP_001309988.1 3369998 R 290402 CDS YP_001309989.1 150017735 5294078 complement(3370956..3371741) 1 NC_009617.1 PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; KEGG: fnu:FN1534 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha/beta-subunit-like protein 3371741 5294078 Cbei_2887 Clostridium beijerinckii NCIMB 8052 electron transfer flavoprotein, alpha/beta-subunit-like protein YP_001309989.1 3370956 R 290402 CDS YP_001309990.1 150017736 5294079 3372195..3372689 1 NC_009617.1 PFAM: nitroreductase; KEGG: cac:CAC3483 nitroreductase fused to ferredoxin domain; nitroreductase 3372689 5294079 Cbei_2888 Clostridium beijerinckii NCIMB 8052 nitroreductase YP_001309990.1 3372195 D 290402 CDS YP_001309991.1 150017737 5294080 complement(3372774..3374153) 1 NC_009617.1 PFAM: amino acid permease-associated region; KEGG: cac:CAC1472 amino acid permease; amino acid permease-associated protein 3374153 5294080 Cbei_2889 Clostridium beijerinckii NCIMB 8052 amino acid permease-associated protein YP_001309991.1 3372774 R 290402 CDS YP_001309992.1 150017738 5294081 complement(3374454..3375317) 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 3; KEGG: vei:Veis_0187 extracellular solute-binding protein, family 3; extracellular solute-binding protein 3375317 5294081 Cbei_2890 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001309992.1 3374454 R 290402 CDS YP_001309993.1 150017739 5294082 complement(3375520..3377547) 1 NC_009617.1 PFAM: glycoside hydrolase, family 31; KEGG: bha:BH2055 glycosyl hydrolase; glycoside hydrolase 3377547 5294082 Cbei_2891 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001309993.1 3375520 R 290402 CDS YP_001309994.1 150017740 5294083 complement(3377681..3378526) 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bld:BLi03542 similar to sugar permease; RBL01127; binding-protein-dependent transport system inner membrane protein 3378526 5294083 Cbei_2892 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001309994.1 3377681 R 290402 CDS YP_001309995.1 150017741 5294084 complement(3378526..3379434) 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bld:BLi03541 transporter; RBL01129; binding-protein-dependent transport system inner membrane protein 3379434 5294084 Cbei_2893 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001309995.1 3378526 R 290402 CDS YP_001309996.1 150017742 5294085 complement(3379955..3381208) 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 1; KEGG: bld:BLi03540 ABC transporter sugar binding protein; RBL01130; extracellular solute-binding protein 3381208 5294085 Cbei_2894 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001309996.1 3379955 R 290402 CDS YP_001309997.1 150017743 5296388 3381685..3383142 1 NC_009617.1 KEGG: tte:TTE2242 transposase; transposase 3383142 5296388 Cbei_2896 Clostridium beijerinckii NCIMB 8052 transposase YP_001309997.1 3381685 D 290402 CDS YP_001309998.1 150017744 5294087 complement(3383308..3384699) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: cpr:CPR_2056 DNA-binding response regulator, AraC family; response regulator receiver protein 3384699 5294087 Cbei_2897 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001309998.1 3383308 R 290402 CDS YP_001309999.1 150017745 5294088 complement(3384711..3386594) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase internal region; KEGG: tte:TTE2344 predicted ATPase; histidine kinase internal region 3386594 5294088 Cbei_2898 Clostridium beijerinckii NCIMB 8052 histidine kinase internal region YP_001309999.1 3384711 R 290402 CDS YP_001310000.1 150017746 5294089 complement(3387158..3387631) 1 NC_009617.1 PFAM: thioesterase superfamily protein; KEGG: tte:TTE1843 uncharacterized protein, possibly involved in aromatic compounds catabolism; thioesterase superfamily protein 3387631 5294089 Cbei_2899 Clostridium beijerinckii NCIMB 8052 thioesterase superfamily protein YP_001310000.1 3387158 R 290402 CDS YP_001310001.1 150017747 5294090 3387932..3389035 1 NC_009617.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: tte:TTE1081 diguanylate cyclase/phosphodiesterase domain 2 (EAL); diguanylate cyclase 3389035 5294090 Cbei_2900 Clostridium beijerinckii NCIMB 8052 diguanylate cyclase YP_001310001.1 3387932 D 290402 CDS YP_001310002.1 150017748 5294091 complement(3389129..3390736) 1 NC_009617.1 PFAM: phosphotransferase system PTS, sorbose-specific IIC subunit; PTS system mannose/fructose/sorbose family IID component; KEGG: eca:ECA2387 PTS system, mannose-specific iid component; PTS system mannose/fructose/sorbose family transporter subunit IID 3390736 5294091 Cbei_2901 Clostridium beijerinckii NCIMB 8052 PTS system mannose/fructose/sorbose family transporter subunit IID YP_001310002.1 3389129 R 290402 CDS YP_001310003.1 150017749 5294092 complement(3390739..3391221) 1 NC_009617.1 PFAM: PTS system sorbose subfamily IIB component; KEGG: bpn:BPEN_459 PTS family enzyme IIA/enzyme IIB, mannose-specific; PTS system sorbose subfamily transporter subunit IIB 3391221 5294092 Cbei_2902 Clostridium beijerinckii NCIMB 8052 PTS system sorbose subfamily transporter subunit IIB YP_001310003.1 3390739 R 290402 CDS YP_001310004.1 150017750 5294093 complement(3391240..3391641) 1 NC_009617.1 PFAM: PTS system fructose subfamily IIA component; KEGG: lpl:lp_0586 mannose PTS, EIIA; PTS system fructose subfamily transporter subunit IIA 3391641 5294093 Cbei_2903 Clostridium beijerinckii NCIMB 8052 PTS system fructose subfamily transporter subunit IIA YP_001310004.1 3391240 R 290402 CDS YP_001310005.1 150017751 5294094 complement(3391671..3392843) 1 NC_009617.1 KEGG: cno:NT01CX_0292 predicted phosphosugar isomerase; phosphosugar isomerase 3392843 5294094 Cbei_2904 Clostridium beijerinckii NCIMB 8052 phosphosugar isomerase YP_001310005.1 3391671 R 290402 CDS YP_001310006.1 150017752 5294095 complement(3392961..3393404) 1 NC_009617.1 PFAM: PTS system fructose subfamily IIA component; KEGG: ppe:PEPE_0174 phosphotransferase system, mannose/fructose-specific component IIA; PTS system fructose subfamily transporter subunit IIA 3393404 5294095 Cbei_2905 Clostridium beijerinckii NCIMB 8052 PTS system fructose subfamily transporter subunit IIA YP_001310006.1 3392961 R 290402 CDS YP_001310007.1 150017753 5294096 complement(3393404..3394207) 1 NC_009617.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N-acetylgalactosamine transport; PTS system N-acetylgalactosamine-specific transporter subunit IID 3394207 5294096 Cbei_2906 Clostridium beijerinckii NCIMB 8052 PTS system N-acetylgalactosamine-specific transporter subunit IID YP_001310007.1 3393404 R 290402 CDS YP_001310008.1 150017754 5294097 complement(3394191..3394991) 1 NC_009617.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane;protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; involved in N-acetylgalactosamine transport; PTS system N-acetylgalactosamine-specific transporter subunit IIC 3394991 5294097 Cbei_2907 Clostridium beijerinckii NCIMB 8052 PTS system N-acetylgalactosamine-specific transporter subunit IIC YP_001310008.1 3394191 R 290402 CDS YP_001310009.1 150017755 5294098 complement(3395006..3395521) 1 NC_009617.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; involved in N-acetylgalactosamine transport; PTS system N-acetylgalactosamine-specific transporter subunit IIB 3395521 5294098 Cbei_2908 Clostridium beijerinckii NCIMB 8052 PTS system N-acetylgalactosamine-specific transporter subunit IIB YP_001310009.1 3395006 R 290402 CDS YP_001310010.1 150017756 5296395 complement(3404858..3405283) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY1415 hypothetical protein; N-acetyltransferase GCN5 3405283 5296395 Cbei_2911 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001310010.1 3404858 R 290402 CDS YP_001310011.1 150017757 5294101 complement(3405749..3407752) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: cac:CAC2547 possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain; methyl-accepting chemotaxis sensory transducer 3407752 5294101 Cbei_2912 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001310011.1 3405749 R 290402 CDS YP_001310012.1 150017758 5294102 3408389..3410407 1 NC_009617.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: lin:lin0795 similar to Na+/H+ antiporter; Na+/H+ antiporter 3410407 5294102 Cbei_2913 Clostridium beijerinckii NCIMB 8052 Na+/H+ antiporter YP_001310012.1 3408389 D 290402 CDS YP_001310013.1 150017759 5294103 3410661..3411713 1 NC_009617.1 KEGG: cpr:CPR_1341 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein 3411713 5294103 Cbei_2914 Clostridium beijerinckii NCIMB 8052 D-galactose-binding periplasmic protein YP_001310013.1 3410661 D 290402 CDS YP_001310014.1 150017760 5294104 complement(3412011..3412739) 1 NC_009617.1 PFAM: MORN repeat-containing protein; KEGG: bfs:BF2279 hypothetical protein; MORN repeat-containing protein 3412739 5294104 Cbei_2915 Clostridium beijerinckii NCIMB 8052 MORN repeat-containing protein YP_001310014.1 3412011 R 290402 CDS YP_001310015.1 150017761 5294105 3413251..3414846 1 NC_009617.1 PFAM: NHL repeat containing protein; KEGG: mba:Mbar_A3620 surface layer protein; NHL repeat-containing protein 3414846 5294105 Cbei_2916 Clostridium beijerinckii NCIMB 8052 NHL repeat-containing protein YP_001310015.1 3413251 D 290402 CDS YP_001310016.1 150017762 5294106 complement(3415087..3418179) 1 NC_009617.1 PFAM: acriflavin resistance protein; KEGG: gme:Gmet_2518 acriflavin resistance protein; acriflavin resistance protein 3418179 5294106 Cbei_2917 Clostridium beijerinckii NCIMB 8052 acriflavin resistance protein YP_001310016.1 3415087 R 290402 CDS YP_001310017.1 150017763 5294107 complement(3418192..3419454) 1 NC_009617.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aba:Acid345_0308 secretion protein HlyD; RND family efflux transporter MFP subunit 3419454 5294107 Cbei_2918 Clostridium beijerinckii NCIMB 8052 RND family efflux transporter MFP subunit YP_001310017.1 3418192 R 290402 CDS YP_001310018.1 150017764 5294108 complement(3420139..3420837) 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: chy:CHY_0092 DNA-binding response regulator; two component transcriptional regulator 3420837 5294108 Cbei_2919 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001310018.1 3420139 R 290402 CDS YP_001310019.1 150017765 5294109 complement(3421012..3422466) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cac:CAC0317 sensory transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 3422466 5294109 Cbei_2920 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001310019.1 3421012 R 290402 CDS YP_001310020.1 150017766 5294110 complement(3422940..3424484) 1 NC_009617.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: chy:CHY_1864 drug resistance transporter EmrB/QacA family; EmrB/QacA family drug resistance transporter 3424484 5294110 Cbei_2921 Clostridium beijerinckii NCIMB 8052 EmrB/QacA family drug resistance transporter YP_001310020.1 3422940 R 290402 CDS YP_001310021.1 150017767 5294111 complement(3424493..3425146) 1 NC_009617.1 KEGG: mta:Moth_2323 secretion protein HlyD; secretion protein HlyD 3425146 5294111 Cbei_2922 Clostridium beijerinckii NCIMB 8052 secretion protein HlyD YP_001310021.1 3424493 R 290402 CDS YP_001310022.1 150017768 5294112 complement(3425162..3426148) 1 NC_009617.1 PFAM: secretion protein HlyD family protein; KEGG: mta:Moth_2322 secretion protein HlyD; secretion protein HlyD family protein 3426148 5294112 Cbei_2923 Clostridium beijerinckii NCIMB 8052 secretion protein HlyD family protein YP_001310022.1 3425162 R 290402 CDS YP_001310023.1 150017769 5294113 complement(3426177..3426383) 1 NC_009617.1 KEGG: cac:CAC3518 transcriptional regulators, AcrR family; AcrR family transcriptional regulator 3426383 5294113 Cbei_2924 Clostridium beijerinckii NCIMB 8052 AcrR family transcriptional regulator YP_001310023.1 3426177 R 290402 CDS YP_001310024.1 150017770 5294114 complement(3426732..3428306) 1 NC_009617.1 PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cac:CAC3010 ATP-dependent RNA helicase (superfamily II), YDBR B.subtilis ortholog; DEAD/DEAH box helicase 3428306 5294114 Cbei_2925 Clostridium beijerinckii NCIMB 8052 DEAD/DEAH box helicase YP_001310024.1 3426732 R 290402 CDS YP_001310025.1 150017771 5294115 complement(3428432..3428623) 1 NC_009617.1 PFAM: Cold-shock protein, DNA-binding; Ribonuclease B, OB region N-terminal domain; SMART: Cold shock protein; KEGG: cno:NT01CX_0617 cold shock protein CspB; cold-shock DNA-binding domain-containing protein 3428623 5294115 Cbei_2926 Clostridium beijerinckii NCIMB 8052 cold-shock DNA-binding domain-containing protein YP_001310025.1 3428432 R 290402 CDS YP_001310026.1 150017772 5294116 complement(3429234..3429932) 1 NC_009617.1 PFAM: GntR family transcriptional regulator; GntR domain protein; KEGG: cpe:CPE0309 probable transcriptional regulator; GntR family transcriptional regulator 3429932 5294116 Cbei_2927 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001310026.1 3429234 R 290402 CDS YP_001310027.1 150017773 5294117 complement(3430360..3433401) 1 NC_009617.1 PFAM: acriflavin resistance protein; KEGG: dsy:DSY2068 hypothetical protein; acriflavin resistance protein 3433401 5294117 Cbei_2928 Clostridium beijerinckii NCIMB 8052 acriflavin resistance protein YP_001310027.1 3430360 R 290402 CDS YP_001310028.1 150017774 5294118 complement(3433415..3434620) 1 NC_009617.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cno:NT01CX_1548 HlyD family secretion protein; RND family efflux transporter MFP subunit 3434620 5294118 Cbei_2929 Clostridium beijerinckii NCIMB 8052 RND family efflux transporter MFP subunit YP_001310028.1 3433415 R 290402 CDS YP_001310029.1 150017775 5294119 complement(3434680..3436005) 1 NC_009617.1 KEGG: ayw:AYWB_353 hypothetical protein; hypothetical protein 3436005 5294119 Cbei_2930 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310029.1 3434680 R 290402 CDS YP_001310030.1 150017776 5294120 3436208..3436801 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: sha:SH0304 hypothetical protein; TetR family transcriptional regulator 3436801 5294120 Cbei_2931 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001310030.1 3436208 D 290402 CDS YP_001310031.1 150017777 5294121 complement(3437743..3438957) 1 NC_009617.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 3438957 nhaA 5294121 nhaA Clostridium beijerinckii NCIMB 8052 pH-dependent sodium/proton antiporter YP_001310031.1 3437743 R 290402 CDS YP_001310032.1 150017778 5294122 complement(3439204..3439821) 1 NC_009617.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dra:DR0605 GGDEF family protein; diguanylate cyclase 3439821 5294122 Cbei_2933 Clostridium beijerinckii NCIMB 8052 diguanylate cyclase YP_001310032.1 3439204 R 290402 CDS YP_001310033.1 150017779 5294123 3440402..3441262 1 NC_009617.1 PFAM: dihydrodipicolinate reductase; KEGG: cth:Cthe_1170 dihydrodipicolinate reductase; dihydrodipicolinate reductase 3441262 5294123 Cbei_2934 Clostridium beijerinckii NCIMB 8052 dihydrodipicolinate reductase YP_001310033.1 3440402 D 290402 CDS YP_001310034.1 150017780 5296396 3441508..3442362 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mba:Mbar_A0671 acetyltransferase (GNAT) family protein; N-acetyltransferase GCN5 3442362 5296396 Cbei_2936 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001310034.1 3441508 D 290402 CDS YP_001310035.1 150017781 5294125 3442610..3444190 1 NC_009617.1 PFAM: TrkA-C domain protein; Chloride channel, core; KEGG: cno:NT01CX_0195 voltage gated chloride channel family protein; chloride channel protein 3444190 5294125 Cbei_2937 Clostridium beijerinckii NCIMB 8052 chloride channel protein YP_001310035.1 3442610 D 290402 CDS YP_001310036.1 150017782 5294126 3444460..3444615 1 NC_009617.1 hypothetical protein 3444615 5294126 Cbei_2938 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310036.1 3444460 D 290402 CDS YP_001310037.1 150017783 5294127 3444637..3444960 1 NC_009617.1 hypothetical protein 3444960 5294127 Cbei_2939 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310037.1 3444637 D 290402 CDS YP_001310038.1 150017784 5294128 3445252..3446043 1 NC_009617.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bte:BTH_I2387 oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 3446043 5294128 Cbei_2940 Clostridium beijerinckii NCIMB 8052 short-chain dehydrogenase/reductase SDR YP_001310038.1 3445252 D 290402 CDS YP_001310039.1 150017785 5296397 3446457..3447185 1 NC_009617.1 PFAM: protein of unknown function DUF421; KEGG: cac:CAC1521 uncharacterized membrane protein, YetF/YdfS/YkjA/YrbG/YdfR B.subtilis ortholog; hypothetical protein 3447185 5296397 Cbei_2942 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310039.1 3446457 D 290402 CDS YP_001310040.1 150017786 5294130 3447200..3447565 1 NC_009617.1 KEGG: dsy:DSY1539 hypothetical protein; hypothetical protein 3447565 5294130 Cbei_2943 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310040.1 3447200 D 290402 CDS YP_001310041.1 150017787 5294131 complement(3447626..3447988) 1 NC_009617.1 PFAM: Domain of unknown function DUF1791; KEGG: chy:CHY_1266 hypothetical protein; hypothetical protein 3447988 5294131 Cbei_2944 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310041.1 3447626 R 290402 CDS YP_001310042.1 150017788 5294132 complement(3448178..3450664) 1 NC_009617.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SirA family protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SMART: Rhodanese domain protein; KEGG: bth:BT_2434 pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3450664 5294132 Cbei_2945 Clostridium beijerinckii NCIMB 8052 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001310042.1 3448178 R 290402 CDS YP_001310043.1 150017789 5294133 3451485..3452861 1 NC_009617.1 KEGG: cpr:CPR_0627 hypothetical protein; hypothetical protein 3452861 5294133 Cbei_2946 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310043.1 3451485 D 290402 CDS YP_001310044.1 150017790 5294134 complement(3453070..3455337) 1 NC_009617.1 PFAM: UvrD/REP helicase; KEGG: cpr:CPR_1591 ATP-dependent DNA helicase, UvrD/REP family; UvrD/REP helicase 3455337 5294134 Cbei_2947 Clostridium beijerinckii NCIMB 8052 UvrD/REP helicase YP_001310044.1 3453070 R 290402 CDS YP_001310045.1 150017791 5294135 complement(3455756..3456301) 1 NC_009617.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: cac:CAC0114 predicted membrane protein; membrane-bound metal-dependent hydrolase 3456301 5294135 Cbei_2948 Clostridium beijerinckii NCIMB 8052 membrane-bound metal-dependent hydrolase YP_001310045.1 3455756 R 290402 CDS YP_001310046.1 150017792 5294136 complement(3456540..3457013) 1 NC_009617.1 KEGG: cac:CAC2615 uncharacterized conserved protein, CotF B.subtilis family; hypothetical protein 3457013 5294136 Cbei_2949 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310046.1 3456540 R 290402 CDS YP_001310047.1 150017793 5294137 complement(3457132..3458547) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cth:Cthe_1846 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 3458547 5294137 Cbei_2950 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001310047.1 3457132 R 290402 CDS YP_001310048.1 150017794 5294138 complement(3458544..3459260) 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: tte:TTE2474 response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain; two component transcriptional regulator 3459260 5294138 Cbei_2951 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001310048.1 3458544 R 290402 CDS YP_001310049.1 150017795 5294139 complement(3459374..3459628) 1 NC_009617.1 hypothetical protein 3459628 5294139 Cbei_2952 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310049.1 3459374 R 290402 CDS YP_001310050.1 150017796 5294140 complement(3459828..3461936) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY4989 hypothetical protein; methyl-accepting chemotaxis sensory transducer 3461936 5294140 Cbei_2953 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001310050.1 3459828 R 290402 CDS YP_001310051.1 150017797 5294141 complement(3462142..3462729) 1 NC_009617.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: cno:NT01CX_2395 hypothetical protein; cupin 3462729 5294141 Cbei_2954 Clostridium beijerinckii NCIMB 8052 cupin YP_001310051.1 3462142 R 290402 CDS YP_001310052.1 150017798 5294142 3462972..3463268 1 NC_009617.1 KEGG: ddi:DDBDRAFT_0190180 hypothetical protein; hypothetical protein 3463268 5294142 Cbei_2955 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310052.1 3462972 D 290402 CDS YP_001310053.1 150017799 5294143 complement(3463289..3463447) 1 NC_009617.1 KEGG: cac:CAC2416 uncharacterized protein, ErfK family; contains peptidoglycan-binding domain; peptidoglycan-binding domain-containing protein 3463447 5294143 Cbei_2956 Clostridium beijerinckii NCIMB 8052 peptidoglycan-binding domain-containing protein YP_001310053.1 3463289 R 290402 CDS YP_001310054.1 150017800 5294144 3463781..3464677 1 NC_009617.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: aha:AHA_3960 cation efflux family protein; cation diffusion facilitator family transporter 3464677 5294144 Cbei_2957 Clostridium beijerinckii NCIMB 8052 cation diffusion facilitator family transporter YP_001310054.1 3463781 D 290402 CDS YP_001310055.1 150017801 5294145 complement(3464871..3465188) 1 NC_009617.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: cno:NT01CX_1158 thioredoxin; thioredoxin 3465188 5294145 Cbei_2958 Clostridium beijerinckii NCIMB 8052 thioredoxin YP_001310055.1 3464871 R 290402 CDS YP_001310056.1 150017802 5294146 complement(3465334..3465936) 1 NC_009617.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: dsy:DSY1195 hypothetical protein; alkyl hydroperoxide reductase 3465936 5294146 Cbei_2959 Clostridium beijerinckii NCIMB 8052 alkyl hydroperoxide reductase YP_001310056.1 3465334 R 290402 CDS YP_001310057.1 150017803 5294147 complement(3465946..3466623) 1 NC_009617.1 PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: dsy:DSY1196 probable cytochrome c biogenesis protein CcdA; cytochrome C biogenesis transmembrane protein 3466623 5294147 Cbei_2960 Clostridium beijerinckii NCIMB 8052 cytochrome C biogenesis transmembrane protein YP_001310057.1 3465946 R 290402 CDS YP_001310058.1 150017804 5294148 3466925..3467281 1 NC_009617.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dsy:DSY0274 hypothetical protein; dinitrogenase iron-molybdenum cofactor biosynthesis protein 3467281 5294148 Cbei_2961 Clostridium beijerinckii NCIMB 8052 dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_001310058.1 3466925 D 290402 CDS YP_001310059.1 150017805 5294149 complement(3467370..3467816) 1 NC_009617.1 PFAM: protein of unknown function DUF134; KEGG: ctc:CTC01373 DNA-binding protein; hypothetical protein 3467816 5294149 Cbei_2962 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310059.1 3467370 R 290402 CDS YP_001310060.1 150017806 5294150 complement(3468150..3468854) 1 NC_009617.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mta:Moth_1280 ubiquinone/menaquinone biosynthesis methyltransferases; ubiquinone/menaquinone biosynthesis methyltransferase 3468854 5294150 Cbei_2963 Clostridium beijerinckii NCIMB 8052 ubiquinone/menaquinone biosynthesis methyltransferase YP_001310060.1 3468150 R 290402 CDS YP_001310061.1 150017807 5294151 complement(3468971..3469597) 1 NC_009617.1 PFAM: Abortive infection protein; KEGG: lip:LI0758 hypothetical protein; abortive infection protein 3469597 5294151 Cbei_2964 Clostridium beijerinckii NCIMB 8052 abortive infection protein YP_001310061.1 3468971 R 290402 CDS YP_001310062.1 150017808 5294152 complement(3469613..3470512) 1 NC_009617.1 TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: tma:TM1528 1,4-dihydroxy-2-naphthoate octaprenyltransferase; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 3470512 5294152 Cbei_2965 Clostridium beijerinckii NCIMB 8052 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_001310062.1 3469613 R 290402 CDS YP_001310063.1 150017809 5294153 complement(3470639..3472030) 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: dsy:DSY1372 hypothetical protein; 4Fe-4S ferredoxin 3472030 5294153 Cbei_2966 Clostridium beijerinckii NCIMB 8052 4Fe-4S ferredoxin YP_001310063.1 3470639 R 290402 CDS YP_001310064.1 150017810 5294154 complement(3472057..3472596) 1 NC_009617.1 hypothetical protein 3472596 5294154 Cbei_2967 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310064.1 3472057 R 290402 CDS YP_001310065.1 150017811 5294155 complement(3472674..3473168) 1 NC_009617.1 PFAM: DoxX family protein; KEGG: rxy:Rxyl_3069 DoxX; DoxX family protein 3473168 5294155 Cbei_2968 Clostridium beijerinckii NCIMB 8052 DoxX family protein YP_001310065.1 3472674 R 290402 CDS YP_001310066.1 150017812 5294156 complement(3473210..3474037) 1 NC_009617.1 PFAM: Polyprenyl synthetase; KEGG: swo:Swol_0680 trans-hexaprenyltranstransferase; polyprenyl synthetase 3474037 5294156 Cbei_2969 Clostridium beijerinckii NCIMB 8052 polyprenyl synthetase YP_001310066.1 3473210 R 290402 CDS YP_001310067.1 150017813 5294157 complement(3474357..3475190) 1 NC_009617.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: mta:Moth_1993 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 3475190 5294157 Cbei_2970 Clostridium beijerinckii NCIMB 8052 prolipoprotein diacylglyceryl transferase YP_001310067.1 3474357 R 290402 CDS YP_001310068.1 150017814 5294158 complement(3475443..3476546) 1 NC_009617.1 PFAM: NLP/P60 protein; KEGG: ctc:CTC00227 cell wall-associated hydrolase; NLP/P60 protein 3476546 5294158 Cbei_2971 Clostridium beijerinckii NCIMB 8052 NLP/P60 protein YP_001310068.1 3475443 R 290402 CDS YP_001310069.1 150017815 5294159 3476778..3477464 1 NC_009617.1 TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ctc:CTC02510 cell division ATP-binding protein ftsE; cell division ATP-binding protein FtsE 3477464 5294159 Cbei_2972 Clostridium beijerinckii NCIMB 8052 cell division ATP-binding protein FtsE YP_001310069.1 3476778 D 290402 CDS YP_001310070.1 150017816 5294160 3477454..3478347 1 NC_009617.1 PFAM: protein of unknown function DUF214; KEGG: ctc:CTC02509 cell division protein ftsX; hypothetical protein 3478347 5294160 Cbei_2973 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310070.1 3477454 D 290402 CDS YP_001310071.1 150017817 5296398 complement(3478841..3480553) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01211 methyl-accepting chemotaxis protein TlpA; methyl-accepting chemotaxis sensory transducer 3480553 5296398 Cbei_2975 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001310071.1 3478841 R 290402 CDS YP_001310072.1 150017818 5294162 3480954..3481658 1 NC_009617.1 PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: ctc:CTC00145 cytochrome c-type biogenesis protein ccdA; cytochrome C biogenesis transmembrane protein 3481658 5294162 Cbei_2976 Clostridium beijerinckii NCIMB 8052 cytochrome C biogenesis transmembrane protein YP_001310072.1 3480954 D 290402 CDS YP_001310073.1 150017819 5294163 3481677..3482258 1 NC_009617.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: tte:TTE1026 thiol-disulfide isomerase and thioredoxins; alkyl hydroperoxide reductase 3482258 5294163 Cbei_2977 Clostridium beijerinckii NCIMB 8052 alkyl hydroperoxide reductase YP_001310073.1 3481677 D 290402 CDS YP_001310074.1 150017820 5294164 complement(3482314..3482883) 1 NC_009617.1 PFAM: SNARE associated Golgi protein; KEGG: cpe:CPE1564 hypothetical protein; hypothetical protein 3482883 5294164 Cbei_2978 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310074.1 3482314 R 290402 CDS YP_001310075.1 150017821 5294165 complement(3483109..3483318) 1 NC_009617.1 hypothetical protein 3483318 5294165 Cbei_2979 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310075.1 3483109 R 290402 CDS YP_001310076.1 150017822 5294166 3483657..3484562 1 NC_009617.1 PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG: mxa:MXAN_3425 multicopper oxidase domain protein; multicopper oxidase, type 3 3484562 5294166 Cbei_2980 Clostridium beijerinckii NCIMB 8052 multicopper oxidase, type 3 YP_001310076.1 3483657 D 290402 CDS YP_001310077.1 150017823 5294167 complement(3484687..3484968) 1 NC_009617.1 hypothetical protein 3484968 5294167 Cbei_2981 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310077.1 3484687 R 290402 CDS YP_001310078.1 150017824 5294168 complement(3484999..3485229) 1 NC_009617.1 hypothetical protein 3485229 5294168 Cbei_2982 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310078.1 3484999 R 290402 CDS YP_001310079.1 150017825 5296399 complement(3486194..3487567) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cac:CAC1553 membrane associated sensory transduction histidine kinase (with HAMP domain); integral membrane sensor signal transduction histidine kinase 3487567 5296399 Cbei_2984 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001310079.1 3486194 R 290402 CDS YP_001310080.1 150017826 5294170 complement(3487564..3488247) 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cac:CAC1552 response regulator (CheY-like receiver domain and HTH DNA-binding domain); two component transcriptional regulator 3488247 5294170 Cbei_2985 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001310080.1 3487564 R 290402 CDS YP_001310081.1 150017827 5294171 complement(3488619..3490037) 1 NC_009617.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: mta:Moth_0987 proton-translocating NADH-quinone oxidoreductase, chain N; proton-translocating NADH-quinone oxidoreductase subunit N 3490037 5294171 Cbei_2986 Clostridium beijerinckii NCIMB 8052 proton-translocating NADH-quinone oxidoreductase subunit N YP_001310081.1 3488619 R 290402 CDS YP_001310082.1 150017828 5294172 complement(3490040..3491563) 1 NC_009617.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: mta:Moth_0986 proton-translocating NADH-quinone oxidoreductase, chain M; proton-translocating NADH-quinone oxidoreductase subunit M 3491563 5294172 Cbei_2987 Clostridium beijerinckii NCIMB 8052 proton-translocating NADH-quinone oxidoreductase subunit M YP_001310082.1 3490040 R 290402 CDS YP_001310083.1 150017829 5294173 complement(3491564..3493417) 1 NC_009617.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); KEGG: mta:Moth_0985 proton-translocating NADH-quinone oxidoreductase, chain L; proton-translocating NADH-quinone oxidoreductase subunit L 3493417 5294173 Cbei_2988 Clostridium beijerinckii NCIMB 8052 proton-translocating NADH-quinone oxidoreductase subunit L YP_001310083.1 3491564 R 290402 CDS YP_001310084.1 150017830 5294174 complement(3493426..3493734) 1 NC_009617.1 PFAM: NADH-ubiquinone oxidoreductase, chain 4L; KEGG: mta:Moth_0984 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase subunit 4L 3493734 5294174 Cbei_2989 Clostridium beijerinckii NCIMB 8052 NADH-ubiquinone oxidoreductase subunit 4L YP_001310084.1 3493426 R 290402 CDS YP_001310085.1 150017831 5294175 complement(3493735..3494226) 1 NC_009617.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: mta:Moth_0983 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 3494226 5294175 Cbei_2990 Clostridium beijerinckii NCIMB 8052 NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 YP_001310085.1 3493735 R 290402 CDS YP_001310086.1 150017832 5294176 complement(3494316..3494705) 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: chy:CHY_1420 proton-translocating NADH-quinone oxidoreductase, I subunit; 4Fe-4S ferredoxin 3494705 5294176 Cbei_2991 Clostridium beijerinckii NCIMB 8052 4Fe-4S ferredoxin YP_001310086.1 3494316 R 290402 CDS YP_001310087.1 150017833 5294177 complement(3494878..3495912) 1 NC_009617.1 PFAM: respiratory-chain NADH dehydrogenase, subunit 1; KEGG: mta:Moth_0981 respiratory-chain NADH dehydrogenase, subunit 1; NADH dehydrogenase (quinone) 3495912 5294177 Cbei_2992 Clostridium beijerinckii NCIMB 8052 NADH dehydrogenase (quinone) YP_001310087.1 3494878 R 290402 CDS YP_001310088.1 150017834 5294178 complement(3495926..3497038) 1 NC_009617.1 catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit D 3497038 5294178 Cbei_2993 Clostridium beijerinckii NCIMB 8052 NADH dehydrogenase subunit D YP_001310088.1 3495926 R 290402 CDS YP_001310089.1 150017835 5294179 complement(3497057..3497494) 1 NC_009617.1 PFAM: NADH dehydrogenase (ubiquinone), 30 kDa subunit; KEGG: mta:Moth_0979 NADH (or F420H2) dehydrogenase, subunit C; NADH dehydrogenase (ubiquinone), 30 kDa subunit 3497494 5294179 Cbei_2994 Clostridium beijerinckii NCIMB 8052 NADH dehydrogenase (ubiquinone), 30 kDa subunit YP_001310089.1 3497057 R 290402 CDS YP_001310090.1 150017836 5294180 complement(3497487..3497996) 1 NC_009617.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 3497996 5294180 Cbei_2995 Clostridium beijerinckii NCIMB 8052 NADH dehydrogenase subunit B YP_001310090.1 3497487 R 290402 CDS YP_001310091.1 150017837 5294181 complement(3497987..3498343) 1 NC_009617.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; KEGG: mta:Moth_0977 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 3498343 5294181 Cbei_2996 Clostridium beijerinckii NCIMB 8052 NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 YP_001310091.1 3497987 R 290402 CDS YP_001310092.1 150017838 5294182 complement(3498896..3499102) 1 NC_009617.1 hypothetical protein 3499102 5294182 Cbei_2997 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310092.1 3498896 R 290402 CDS YP_001310093.1 150017839 5294183 complement(3499171..3499614) 1 NC_009617.1 hypothetical protein 3499614 5294183 Cbei_2998 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310093.1 3499171 R 290402 CDS YP_001310094.1 150017840 5294184 complement(3499843..3500730) 1 NC_009617.1 PFAM: UbiA prenyltransferase; KEGG: ssp:SSP1750 14-dihydroxy-2-naphthodate octaprenyltransferase; UbiA prenyltransferase 3500730 5294184 Cbei_2999 Clostridium beijerinckii NCIMB 8052 UbiA prenyltransferase YP_001310094.1 3499843 R 290402 CDS YP_001310095.1 150017841 5294185 complement(3501229..3502929) 1 NC_009617.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rhodanese domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: cno:NT01CX_0308 pyridine nucleotide-disulphide oxidoreductase family protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3502929 5294185 Cbei_3000 Clostridium beijerinckii NCIMB 8052 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001310095.1 3501229 R 290402 CDS YP_001310096.1 150017842 5294186 complement(3503267..3504133) 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: mst:Msp_0703 dissimilatory sulfite reductase; nitrite and sulfite reductase 4Fe-4S subunit 3504133 5294186 Cbei_3001 Clostridium beijerinckii NCIMB 8052 nitrite and sulfite reductase 4Fe-4S subunit YP_001310096.1 3503267 R 290402 CDS YP_001310097.1 150017843 5294187 complement(3504255..3505073) 1 NC_009617.1 PFAM: protein of unknown function DUF81; KEGG: chy:CHY_2470 hypothetical protein; hypothetical protein 3505073 5294187 Cbei_3002 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310097.1 3504255 R 290402 CDS YP_001310098.1 150017844 5294188 complement(3505245..3505901) 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cno:NT01CX_0639 conserved protein, ferredoxin-related; 4Fe-4S ferredoxin 3505901 5294188 Cbei_3003 Clostridium beijerinckii NCIMB 8052 4Fe-4S ferredoxin YP_001310098.1 3505245 R 290402 CDS YP_001310099.1 150017845 5294189 complement(3506314..3507096) 1 NC_009617.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 3507096 5294189 Cbei_3004 Clostridium beijerinckii NCIMB 8052 prolipoprotein diacylglyceryl transferase YP_001310099.1 3506314 R 290402 CDS YP_001310100.1 150017846 5294190 complement(3507101..3508249) 1 NC_009617.1 PFAM: ROK family protein; KEGG: dsy:DSY2954 hypothetical protein; ROK family protein 3508249 5294190 Cbei_3005 Clostridium beijerinckii NCIMB 8052 ROK family protein YP_001310100.1 3507101 R 290402 CDS YP_001310101.1 150017847 5294191 complement(3508416..3509417) 1 NC_009617.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: cac:CAC0809 hydrogenase formation factor (hypE); hydrogenase expression/formation protein HypE 3509417 5294191 Cbei_3006 Clostridium beijerinckii NCIMB 8052 hydrogenase expression/formation protein HypE YP_001310101.1 3508416 R 290402 CDS YP_001310102.1 150017848 5294192 complement(3509418..3510497) 1 NC_009617.1 PFAM: hydrogenase formation HypD protein; KEGG: tte:TTE0133 Hydrogenase maturation factor; hydrogenase formation HypD protein 3510497 5294192 Cbei_3007 Clostridium beijerinckii NCIMB 8052 hydrogenase formation HypD protein YP_001310102.1 3509418 R 290402 CDS YP_001310103.1 150017849 5294193 complement(3510494..3510721) 1 NC_009617.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: dsy:DSY2476 hydrogenase expression/formation protein HypC; hydrogenase assembly chaperone HypC/HupF 3510721 5294193 Cbei_3008 Clostridium beijerinckii NCIMB 8052 hydrogenase assembly chaperone HypC/HupF YP_001310103.1 3510494 R 290402 CDS YP_001310104.1 150017850 5294194 complement(3510881..3513181) 1 NC_009617.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC, N-terminal domain; zinc finger, HypF domain protein; KEGG: cac:CAC0810 hydrogenase maturation factor (hypF); (NiFe) hydrogenase maturation protein HypF 3513181 5294194 Cbei_3009 Clostridium beijerinckii NCIMB 8052 (NiFe) hydrogenase maturation protein HypF YP_001310104.1 3510881 R 290402 CDS YP_001310105.1 150017851 5294195 complement(3513233..3513487) 1 NC_009617.1 KEGG: cac:CA_P0145 hypothetical protein, CF-29 family; hypothetical protein 3513487 5294195 Cbei_3010 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310105.1 3513233 R 290402 CDS YP_001310106.1 150017852 5294196 complement(3513504..3513977) 1 NC_009617.1 TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52, hydrogen uptake protein; KEGG: cac:CA_P0143 hydrogenase maturation protease delta subunit, HyaD-like; hydrogenase maturation protease 3513977 5294196 Cbei_3011 Clostridium beijerinckii NCIMB 8052 hydrogenase maturation protease YP_001310106.1 3513504 R 290402 CDS YP_001310107.1 150017853 5294197 complement(3514299..3515690) 1 NC_009617.1 PFAM: nickel-dependent hydrogenase, large subunit; KEGG: cac:CA_P0142 hydrogenase large chain; nickel-dependent hydrogenase, large subunit 3515690 5294197 Cbei_3012 Clostridium beijerinckii NCIMB 8052 nickel-dependent hydrogenase, large subunit YP_001310107.1 3514299 R 290402 CDS YP_001310108.1 150017854 5294198 complement(3515699..3516574) 1 NC_009617.1 TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein; KEGG: cac:CA_P0141 hydrogenase small chain; hydrogenase (NiFe) small subunit HydA 3516574 5294198 Cbei_3013 Clostridium beijerinckii NCIMB 8052 hydrogenase (NiFe) small subunit HydA YP_001310108.1 3515699 R 290402 CDS YP_001310109.1 150017855 5294199 3517021..3518667 1 NC_009617.1 catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 3518667 5294199 Cbei_3014 Clostridium beijerinckii NCIMB 8052 hydroxylamine reductase YP_001310109.1 3517021 D 290402 CDS YP_001310110.1 150017856 5294200 complement(3518783..3519199) 1 NC_009617.1 TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: cac:CAC0587 flavodoxin; flavodoxin 3519199 5294200 Cbei_3015 Clostridium beijerinckii NCIMB 8052 flavodoxin YP_001310110.1 3518783 R 290402 CDS YP_001310111.1 150017857 5294201 complement(3519391..3520104) 1 NC_009617.1 PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: ctc:CTC01876 transcriptional regulatory protein; Crp/Fnr family transcriptional regulator 3520104 5294201 Cbei_3016 Clostridium beijerinckii NCIMB 8052 Crp/Fnr family transcriptional regulator YP_001310111.1 3519391 R 290402 CDS YP_001310112.1 150017858 5294202 3520375..3521607 1 NC_009617.1 PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: ctc:CTC01875 flavodoxin; beta-lactamase domain-containing protein 3521607 5294202 Cbei_3017 Clostridium beijerinckii NCIMB 8052 beta-lactamase domain-containing protein YP_001310112.1 3520375 D 290402 CDS YP_001310113.1 150017859 5294203 complement(3521804..3522994) 1 NC_009617.1 PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: ppd:Ppro_3699 beta-lactamase domain protein; beta-lactamase domain-containing protein 3522994 5294203 Cbei_3018 Clostridium beijerinckii NCIMB 8052 beta-lactamase domain-containing protein YP_001310113.1 3521804 R 290402 CDS YP_001310114.1 150017860 5294204 complement(3523235..3524458) 1 NC_009617.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: chy:CHY_2596 nitrate reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3524458 5294204 Cbei_3019 Clostridium beijerinckii NCIMB 8052 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001310114.1 3523235 R 290402 CDS YP_001310115.1 150017861 5294205 3524784..3526712 1 NC_009617.1 TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane; KEGG: cac:CAC2498 carbon monoxide dehydrogenase, catalytic subunit (cooS); carbon-monoxide dehydrogenase, catalytic subunit 3526712 5294205 Cbei_3020 Clostridium beijerinckii NCIMB 8052 carbon-monoxide dehydrogenase, catalytic subunit YP_001310115.1 3524784 D 290402 CDS YP_001310116.1 150017862 5294206 complement(3526913..3527242) 1 NC_009617.1 hypothetical protein 3527242 5294206 Cbei_3021 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310116.1 3526913 R 290402 CDS YP_001310117.1 150017863 5294207 complement(3527480..3528427) 1 NC_009617.1 PFAM: chemotaxis sensory transducer; KEGG: btl:BALH_0624 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 3528427 5294207 Cbei_3022 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001310117.1 3527480 R 290402 CDS YP_001310118.1 150017864 5294208 3528894..3529439 1 NC_009617.1 KEGG: ssa:SSA_0505 conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family; hypothetical protein 3529439 5294208 Cbei_3023 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310118.1 3528894 D 290402 CDS YP_001310119.1 150017865 5294209 3529457..3531046 1 NC_009617.1 PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: bca:BCE_1547 nitrite reductase; sulfite reductase (ferredoxin) 3531046 5294209 Cbei_3024 Clostridium beijerinckii NCIMB 8052 sulfite reductase (ferredoxin) YP_001310119.1 3529457 D 290402 CDS YP_001310120.1 150017866 5294210 complement(3531109..3531864) 1 NC_009617.1 KEGG: cph:Cpha266_1424 nitroreductase; nitroreductase 3531864 5294210 Cbei_3025 Clostridium beijerinckii NCIMB 8052 nitroreductase YP_001310120.1 3531109 R 290402 CDS YP_001310121.1 150017867 5294211 complement(3532148..3532516) 1 NC_009617.1 PFAM: Heavy metal transport/detoxification protein; KEGG: mpt:Mpe_A1640 P1 ATPase/HMA domain; heavy metal transport/detoxification protein 3532516 5294211 Cbei_3026 Clostridium beijerinckii NCIMB 8052 heavy metal transport/detoxification protein YP_001310121.1 3532148 R 290402 CDS YP_001310122.1 150017868 5294212 3532869..3533396 1 NC_009617.1 PFAM: transcriptional regulator PadR family protein; KEGG: lbr:LVIS_1807 predicted transcriptional regulator; PadR-like family transcriptional regulator 3533396 5294212 Cbei_3027 Clostridium beijerinckii NCIMB 8052 PadR-like family transcriptional regulator YP_001310122.1 3532869 D 290402 CDS YP_001310123.1 150017869 5294213 3533402..3534766 1 NC_009617.1 PFAM: major facilitator superfamily MFS_1; KEGG: mlo:mll1728 probable transporter; major facilitator superfamily transporter 3534766 5294213 Cbei_3028 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001310123.1 3533402 D 290402 CDS YP_001310124.1 150017870 5294214 complement(3534991..3535341) 1 NC_009617.1 hypothetical protein 3535341 5294214 Cbei_3029 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310124.1 3534991 R 290402 CDS YP_001310125.1 150017871 5294215 complement(3535472..3536818) 1 NC_009617.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dsy:DSY0083 hypothetical protein; radical SAM domain-containing protein 3536818 5294215 Cbei_3030 Clostridium beijerinckii NCIMB 8052 radical SAM domain-containing protein YP_001310125.1 3535472 R 290402 CDS YP_001310126.1 150017872 5294216 complement(3537037..3537252) 1 NC_009617.1 SMART: helix-turn-helix domain protein; KEGG: bld:BLi01580 YozG; XRE family transcriptional regulator 3537252 5294216 Cbei_3031 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001310126.1 3537037 R 290402 CDS YP_001310127.1 150017873 5294217 complement(3537309..3537785) 1 NC_009617.1 KEGG: cac:CAC2553 uncharacterized mebrane protein, YOAS B.subtilis ortholog; hypothetical protein 3537785 5294217 Cbei_3032 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310127.1 3537309 R 290402 CDS YP_001310128.1 150017874 5294218 complement(3537935..3538636) 1 NC_009617.1 KEGG: lbr:LVIS_0656 hypothetical protein; hypothetical protein 3538636 5294218 Cbei_3033 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310128.1 3537935 R 290402 CDS YP_001310129.1 150017875 5294219 complement(3538636..3539091) 1 NC_009617.1 PFAM: LytTr DNA-binding region; KEGG: ssa:SSA_1982 transcriptional regulator, LytR/AlgR family; response regulator receiver protein 3539091 5294219 Cbei_3034 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001310129.1 3538636 R 290402 CDS YP_001310130.1 150017876 5294220 3539357..3539821 1 NC_009617.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mac:MA0616 2-cys peroxiredoxin, subunit A; alkyl hydroperoxide reductase 3539821 5294220 Cbei_3035 Clostridium beijerinckii NCIMB 8052 alkyl hydroperoxide reductase YP_001310130.1 3539357 D 290402 CDS YP_001310131.1 150017877 5294221 complement(3540022..3540699) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; cell wall binding repeat-containing protein 3540699 5294221 Cbei_3036 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001310131.1 3540022 R 290402 CDS YP_001310132.1 150017878 5294222 complement(3540988..3542871) 1 NC_009617.1 KEGG: ctc:CTC02461 cell division protein ftsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA, central domain protein; peptidase M41, FtsH extracellular; SMART: ATPase AAA; ATP-dependent metalloprotease FtsH 3542871 5294222 Cbei_3037 Clostridium beijerinckii NCIMB 8052 ATP-dependent metalloprotease FtsH YP_001310132.1 3540988 R 290402 CDS YP_001310133.1 150017879 5294223 complement(3542965..3543648) 1 NC_009617.1 PFAM: peptidase, membrane zinc metallopeptidase, KEGG: cth:Cthe_0570 peptidase, membrane zinc metallopeptidase; peptidase, membrane zinc metallopeptidase 3543648 5294223 Cbei_3038 Clostridium beijerinckii NCIMB 8052 peptidase, membrane zinc metallopeptidase YP_001310133.1 3542965 R 290402 CDS YP_001310134.1 150017880 5294224 complement(3544020..3544907) 1 NC_009617.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis; fructose-1,6-bisphosphate aldolase 3544907 5294224 Cbei_3039 Clostridium beijerinckii NCIMB 8052 fructose-1,6-bisphosphate aldolase YP_001310134.1 3544020 R 290402 CDS YP_001310135.1 150017881 5294225 complement(3545055..3545885) 1 NC_009617.1 PFAM: protein of unknown function DUF323; KEGG: bha:BH0900 transcriptional regulator (enhancement of xylanase A production); hypothetical protein 3545885 5294225 Cbei_3040 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310135.1 3545055 R 290402 CDS YP_001310136.1 150017882 5294226 complement(3546169..3546813) 1 NC_009617.1 PFAM: glycoside hydrolase, family 11; KEGG: bsu:BG10808 endo-1,4-beta-xylanase; endo-1,4-beta-xylanase 3546813 5294226 Cbei_3041 Clostridium beijerinckii NCIMB 8052 endo-1,4-beta-xylanase YP_001310136.1 3546169 R 290402 CDS YP_001310137.1 150017883 5294227 3547597..3547914 1 NC_009617.1 hypothetical protein 3547914 5294227 Cbei_3042 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310137.1 3547597 D 290402 CDS YP_001310138.1 150017884 5294228 complement(3548475..3549092) 1 NC_009617.1 KEGG: cac:CAC0208 predicted membrane protein; CF-20 family; hypothetical protein 3549092 5294228 Cbei_3043 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310138.1 3548475 R 290402 CDS YP_001310139.1 150017885 5296400 complement(3550247..3550414) 1 NC_009617.1 hypothetical protein 3550414 5296400 Cbei_3044 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310139.1 3550247 R 290402 CDS YP_001310140.1 150017886 5294230 complement(3550680..3552401) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY3990 hypothetical protein; methyl-accepting chemotaxis sensory transducer 3552401 5294230 Cbei_3045 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001310140.1 3550680 R 290402 CDS YP_001310141.1 150017887 5294231 complement(3553071..3554006) 1 NC_009617.1 PFAM: NADPH-dependent FMN reductase; KEGG: cac:CAC2528 multimeric flavodoxin WrbA fused to cytochrome c-like domain; NADPH-dependent FMN reductase 3554006 5294231 Cbei_3046 Clostridium beijerinckii NCIMB 8052 NADPH-dependent FMN reductase YP_001310141.1 3553071 R 290402 CDS YP_001310142.1 150017888 5294232 3554324..3556849 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; glycoside hydrolase, family 39; KEGG: bha:BH1068 beta-xylosidase; xylan 1,4-beta-xylosidase 3556849 5294232 Cbei_3047 Clostridium beijerinckii NCIMB 8052 xylan 1,4-beta-xylosidase YP_001310142.1 3554324 D 290402 CDS YP_001310143.1 150017889 5296401 complement(3557253..3558806) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpe:CPE0137 probable ABC transporter; ABC transporter 3558806 5296401 Cbei_3049 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001310143.1 3557253 R 290402 CDS YP_001310144.1 150017890 5294234 complement(3558960..3559235) 1 NC_009617.1 KEGG: cac:CA_P0061 hypothetical protein; response regulator receiver protein 3559235 5294234 Cbei_3050 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001310144.1 3558960 R 290402 CDS YP_001310145.1 150017891 5294235 complement(3559510..3560727) 1 NC_009617.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: cac:CAC2534 HD_GYP hydrolase domain fused to HD hydrolase domain; metal dependent phosphohydrolase 3560727 5294235 Cbei_3051 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001310145.1 3559510 R 290402 CDS YP_001310146.1 150017892 5294236 complement(3560796..3562187) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cth:Cthe_1846 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 3562187 5294236 Cbei_3052 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001310146.1 3560796 R 290402 CDS YP_001310147.1 150017893 5294237 complement(3562171..3562887) 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cth:Cthe_1847 two component transcriptional regulator, winged helix family; two component transcriptional regulator 3562887 5294237 Cbei_3053 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001310147.1 3562171 R 290402 CDS YP_001310148.1 150017894 5294238 complement(3563517..3565262) 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FMN-binding domain protein; KEGG: cac:CAC2762 polyferredoxin; FMN-binding domain-containing protein 3565262 5294238 Cbei_3054 Clostridium beijerinckii NCIMB 8052 FMN-binding domain-containing protein YP_001310148.1 3563517 R 290402 CDS YP_001310149.1 150017895 5294239 complement(3565310..3566371) 1 NC_009617.1 PFAM: ApbE family lipoprotein; KEGG: cac:CAC2761 thiamine biosynthesis lipoprotein ApbE; ApbE family lipoprotein 3566371 5294239 Cbei_3055 Clostridium beijerinckii NCIMB 8052 ApbE family lipoprotein YP_001310149.1 3565310 R 290402 CDS YP_001310150.1 150017896 5294240 complement(3566600..3566779) 1 NC_009617.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: aci:ACIAD3328 regulatory or redox component complexing with Bfr, in iron storage and mobility (Bfd); BFD/(2Fe-2S)-binding domain-containing protein 3566779 5294240 Cbei_3056 Clostridium beijerinckii NCIMB 8052 BFD/(2Fe-2S)-binding domain-containing protein YP_001310150.1 3566600 R 290402 CDS YP_001310151.1 150017897 5294241 complement(3566933..3567553) 1 NC_009617.1 PFAM: nitroreductase; KEGG: cac:CAC0850 nitroreductase; nitroreductase 3567553 5294241 Cbei_3057 Clostridium beijerinckii NCIMB 8052 nitroreductase YP_001310151.1 3566933 R 290402 CDS YP_001310152.1 150017898 5294242 complement(3567635..3568336) 1 NC_009617.1 PFAM: Pirin domain protein; KEGG: bcz:BCZK4772 pirin; pirin domain-containing protein 3568336 5294242 Cbei_3058 Clostridium beijerinckii NCIMB 8052 pirin domain-containing protein YP_001310152.1 3567635 R 290402 CDS YP_001310153.1 150017899 5294243 complement(3568591..3569037) 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: cpe:CPE0789 probable transcriptional regulator; MarR family transcriptional regulator 3569037 5294243 Cbei_3059 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001310153.1 3568591 R 290402 CDS YP_001310154.1 150017900 5294244 complement(3569205..3570650) 1 NC_009617.1 PFAM: Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: cac:CAC2596 Rieske FeS-domain containing oxidoreductase; FAD dependent oxidoreductase 3570650 5294244 Cbei_3060 Clostridium beijerinckii NCIMB 8052 FAD dependent oxidoreductase YP_001310154.1 3569205 R 290402 CDS YP_001310155.1 150017901 5294245 complement(3570835..3571773) 1 NC_009617.1 KEGG: ctc:CTC02189 hypothetical protein; hypothetical protein 3571773 5294245 Cbei_3061 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310155.1 3570835 R 290402 CDS YP_001310156.1 150017902 5294246 complement(3572045..3572776) 1 NC_009617.1 PFAM: protein of unknown function UPF0016; KEGG: sat:SYN_01349 hypothetical membrane protein; hypothetical protein 3572776 5294246 Cbei_3062 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310156.1 3572045 R 290402 CDS YP_001310157.1 150017903 5294247 3573564..3573839 1 NC_009617.1 PFAM: protein of unknown function DUF156; KEGG: dsy:DSY0162 hypothetical protein; hypothetical protein 3573839 5294247 Cbei_3063 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310157.1 3573564 D 290402 CDS YP_001310158.1 150017904 5294248 3573848..3575713 1 NC_009617.1 TIGRFAM: ATPase P; copper-translocating P-type ATPase; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: dsy:DSY0154 hypothetical protein; heavy metal translocating P-type ATPase 3575713 5294248 Cbei_3064 Clostridium beijerinckii NCIMB 8052 heavy metal translocating P-type ATPase YP_001310158.1 3573848 D 290402 CDS YP_001310159.1 150017905 5294249 complement(3576024..3576527) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC2751 predicted acetyltransferase; N-acetyltransferase GCN5 3576527 5294249 Cbei_3065 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001310159.1 3576024 R 290402 CDS YP_001310160.1 150017906 5294250 complement(3576901..3578151) 1 NC_009617.1 KEGG: cpf:CPF_0639 hypothetical protein; hypothetical protein 3578151 5294250 Cbei_3066 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310160.1 3576901 R 290402 CDS YP_001310161.1 150017907 5294251 3578329..3578649 1 NC_009617.1 hypothetical protein 3578649 5294251 Cbei_3067 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310161.1 3578329 D 290402 CDS YP_001310162.1 150017908 5296402 3579152..3579553 1 NC_009617.1 PFAM: Rubrerythrin; KEGG: mja:MJ0746 hypothetical protein; rubrerythrin 3579553 5296402 Cbei_3069 Clostridium beijerinckii NCIMB 8052 rubrerythrin YP_001310162.1 3579152 D 290402 CDS YP_001310163.1 150017909 5294253 3580070..3581116 1 NC_009617.1 KEGG: cpe:CPE1341 probable galactoside ABC transporter; galactoside ABC transporter 3581116 5294253 Cbei_3070 Clostridium beijerinckii NCIMB 8052 galactoside ABC transporter YP_001310163.1 3580070 D 290402 CDS YP_001310164.1 150017910 5294254 complement(3581336..3582166) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mac:MA4512 acetyltransferase (GNAT) family protein; N-acetyltransferase GCN5 3582166 5294254 Cbei_3071 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001310164.1 3581336 R 290402 CDS YP_001310165.1 150017911 5294255 complement(3582400..3583674) 1 NC_009617.1 KEGG: lmo:lmo0439 hypothetical protein; hypothetical protein 3583674 5294255 Cbei_3072 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310165.1 3582400 R 290402 CDS YP_001310166.1 150017912 5294256 3583872..3584939 1 NC_009617.1 KEGG: cpr:CPR_1341 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein 3584939 5294256 Cbei_3073 Clostridium beijerinckii NCIMB 8052 D-galactose-binding periplasmic protein YP_001310166.1 3583872 D 290402 CDS YP_001310167.1 150017913 5294257 complement(3585294..3587303) 1 NC_009617.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: cth:Cthe_0806 PAS/PAC sensor hybrid histidine kinase; PAS/PAC sensor hybrid histidine kinase 3587303 5294257 Cbei_3074 Clostridium beijerinckii NCIMB 8052 PAS/PAC sensor hybrid histidine kinase YP_001310167.1 3585294 R 290402 CDS YP_001310168.1 150017914 5294258 complement(3587405..3589159) 1 NC_009617.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; KEGG: cno:NT01CX_2347 diguanylate cyclase/phosphodiesterase domain 2; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3589159 5294258 Cbei_3075 Clostridium beijerinckii NCIMB 8052 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001310168.1 3587405 R 290402 CDS YP_001310169.1 150017915 5294259 complement(3589149..3590267) 1 NC_009617.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cpe:CPE1788 hypothetical protein; diguanylate cyclase 3590267 5294259 Cbei_3076 Clostridium beijerinckii NCIMB 8052 diguanylate cyclase YP_001310169.1 3589149 R 290402 CDS YP_001310170.1 150017916 5294260 complement(3590372..3590953) 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: oih:OB3169 hypothetical protein; TetR family transcriptional regulator 3590953 5294260 Cbei_3077 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001310170.1 3590372 R 290402 CDS YP_001310171.1 150017917 5294261 complement(3591316..3593580) 1 NC_009617.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: cth:Cthe_0806 PAS/PAC sensor hybrid histidine kinase; PAS/PAC sensor hybrid histidine kinase 3593580 5294261 Cbei_3078 Clostridium beijerinckii NCIMB 8052 PAS/PAC sensor hybrid histidine kinase YP_001310171.1 3591316 R 290402 CDS YP_001310172.1 150017918 5294262 complement(3593627..3596701) 1 NC_009617.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein; KEGG: cth:Cthe_0806 PAS/PAC sensor hybrid histidine kinase; PAS/PAC sensor hybrid histidine kinase 3596701 5294262 Cbei_3079 Clostridium beijerinckii NCIMB 8052 PAS/PAC sensor hybrid histidine kinase YP_001310172.1 3593627 R 290402 CDS YP_001310173.1 150017919 5294263 complement(3596975..3597184) 1 NC_009617.1 PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: cac:CAC2365 small acid-soluble spore protein; small acid-soluble spore protein, alpha/beta type 3597184 5294263 Cbei_3080 Clostridium beijerinckii NCIMB 8052 small acid-soluble spore protein, alpha/beta type YP_001310173.1 3596975 R 290402 CDS YP_001310174.1 150017920 5294264 complement(3597793..3598308) 1 NC_009617.1 TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; PFAM: NUDIX hydrolase; KEGG: plu:plu3987 unnamed protein product; some similarities with isopentenyl-diphosphate delta-isomerase (IPP isomerase) (isopentenyl pyrophosphate isomerase); isopentenyl-diphosphate delta-isomerase 3598308 5294264 Cbei_3081 Clostridium beijerinckii NCIMB 8052 isopentenyl-diphosphate delta-isomerase YP_001310174.1 3597793 R 290402 CDS YP_001310175.1 150017921 5294265 complement(3598419..3598772) 1 NC_009617.1 PFAM: helix-turn-helix, HxlR type; KEGG: bsu:BG11184 positive regulator of HxlAB; HxlR family transcriptional regulator 3598772 5294265 Cbei_3082 Clostridium beijerinckii NCIMB 8052 HxlR family transcriptional regulator YP_001310175.1 3598419 R 290402 CDS YP_001310176.1 150017922 5294266 3598931..3599485 1 NC_009617.1 PFAM: nitroreductase; KEGG: mmp:MMP0426 nitroreductase family; nitroreductase 3599485 5294266 Cbei_3083 Clostridium beijerinckii NCIMB 8052 nitroreductase YP_001310176.1 3598931 D 290402 CDS YP_001310177.1 150017923 5294267 complement(3600014..3600583) 1 NC_009617.1 PFAM: protein of unknown function DUF1234; KEGG: mfa:Mfla_1025 protein of unknown function DUF1234; hypothetical protein 3600583 5294267 Cbei_3084 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310177.1 3600014 R 290402 CDS YP_001310178.1 150017924 5294268 complement(3600622..3601143) 1 NC_009617.1 PFAM: isochorismatase hydrolase; KEGG: lin:lin0638 hypothetical protein; isochorismatase hydrolase 3601143 5294268 Cbei_3085 Clostridium beijerinckii NCIMB 8052 isochorismatase hydrolase YP_001310178.1 3600622 R 290402 CDS YP_001310179.1 150017925 5294269 complement(3601167..3601427) 1 NC_009617.1 PFAM: TfoX, C-terminal domain protein; KEGG: swo:Swol_2034 hypothetical protein; TfoX domain-containing protein 3601427 5294269 Cbei_3086 Clostridium beijerinckii NCIMB 8052 TfoX domain-containing protein YP_001310179.1 3601167 R 290402 CDS YP_001310180.1 150017926 5294270 complement(3601785..3602096) 1 NC_009617.1 KEGG: dsy:DSY4814 hypothetical protein; hypothetical protein 3602096 5294270 Cbei_3087 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310180.1 3601785 R 290402 CDS YP_001310181.1 150017927 5294271 3602654..3603022 1 NC_009617.1 PFAM: iron dependent repressor; KEGG: cth:Cthe_0620 iron (metal) dependent repressor, DtxR family; iron dependent repressor 3603022 5294271 Cbei_3088 Clostridium beijerinckii NCIMB 8052 iron dependent repressor YP_001310181.1 3602654 D 290402 CDS YP_001310182.1 150017928 5294272 complement(3603087..3604565) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC0528 ABC transporter ATPase component (two ATPase domains); ABC transporter 3604565 5294272 Cbei_3089 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001310182.1 3603087 R 290402 CDS YP_001310183.1 150017929 5294273 complement(3605405..3605560) 1 NC_009617.1 KEGG: cno:NT01CX_0353 hypothetical protein; hypothetical protein 3605560 5294273 Cbei_3090 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310183.1 3605405 R 290402 CDS YP_001310184.1 150017930 5294274 complement(3605980..3607275) 1 NC_009617.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 3607275 hisS 5294274 hisS Clostridium beijerinckii NCIMB 8052 histidyl-tRNA synthetase YP_001310184.1 3605980 R 290402 CDS YP_001310185.1 150017931 5294275 complement(3608365..3609750) 1 NC_009617.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: tde:TDE0333 MATE efflux family protein; MATE efflux family protein 3609750 5294275 Cbei_3092 Clostridium beijerinckii NCIMB 8052 MATE efflux family protein YP_001310185.1 3608365 R 290402 CDS YP_001310186.1 150017932 5294276 complement(3609864..3611615) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY4891 hypothetical protein; ABC transporter 3611615 5294276 Cbei_3093 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001310186.1 3609864 R 290402 CDS YP_001310187.1 150017933 5294277 complement(3611609..3613405) 1 NC_009617.1 PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY4892 hypothetical protein; ABC transporter 3613405 5294277 Cbei_3094 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001310187.1 3611609 R 290402 CDS YP_001310188.1 150017934 5294278 3613700..3614671 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: dsy:DSY3610 hypothetical protein; helix-turn-helix domain-containing protein 3614671 5294278 Cbei_3095 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001310188.1 3613700 D 290402 CDS YP_001310189.1 150017935 5294279 complement(3615065..3616447) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY3613 hypothetical protein; ABC transporter 3616447 5294279 Cbei_3096 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001310189.1 3615065 R 290402 CDS YP_001310190.1 150017936 5294280 complement(3616444..3617139) 1 NC_009617.1 PFAM: cobalt transport protein; KEGG: tde:TDE0283 transporter; cobalt transport protein 3617139 5294280 Cbei_3097 Clostridium beijerinckii NCIMB 8052 cobalt transport protein YP_001310190.1 3616444 R 290402 CDS YP_001310191.1 150017937 5294281 complement(3617142..3617744) 1 NC_009617.1 TIGRFAM: conserved hypothetical integral membrane protein; KEGG: bad:BAD_0736 hypothetical protein; hypothetical protein 3617744 5294281 Cbei_3098 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310191.1 3617142 R 290402 CDS YP_001310192.1 150017938 5294282 3618352..3619344 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: dsy:DSY3610 hypothetical protein; helix-turn-helix domain-containing protein 3619344 5294282 Cbei_3099 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001310192.1 3618352 D 290402 CDS YP_001310193.1 150017939 5294283 complement(3619561..3623202) 1 NC_009617.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 3623202 metH 5294283 metH Clostridium beijerinckii NCIMB 8052 B12-dependent methionine synthase YP_001310193.1 3619561 R 290402 CDS YP_001310194.1 150017940 5294284 complement(3623926..3625332) 1 NC_009617.1 KEGG: cpf:CPF_0713 hypothetical protein; hypothetical protein 3625332 5294284 Cbei_3101 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310194.1 3623926 R 290402 CDS YP_001310195.1 150017941 5294285 complement(3625329..3625862) 1 NC_009617.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: cpe:CPE0716 RNA polymerase ECF-type sigma factor; ECF subfamily RNA polymerase sigma-24 factor 3625862 5294285 Cbei_3102 Clostridium beijerinckii NCIMB 8052 ECF subfamily RNA polymerase sigma-24 factor YP_001310195.1 3625329 R 290402 CDS YP_001310196.1 150017942 5294286 complement(3626437..3628281) 1 NC_009617.1 PFAM: peptidase M56, BlaR1; KEGG: cac:CAC3437 predicted membrane-associated Zn-dependent protease, HtpX family (BlaR subfamily); peptidase M56, BlaR1 3628281 5294286 Cbei_3103 Clostridium beijerinckii NCIMB 8052 peptidase M56, BlaR1 YP_001310196.1 3626437 R 290402 CDS YP_001310197.1 150017943 5294287 complement(3628285..3628659) 1 NC_009617.1 PFAM: Penicillinase repressor; KEGG: bcz:BCZK2407 penicillinase repressor; CopY family transcriptional regulator 3628659 5294287 Cbei_3104 Clostridium beijerinckii NCIMB 8052 CopY family transcriptional regulator YP_001310197.1 3628285 R 290402 CDS YP_001310198.1 150017944 5294288 complement(3629055..3630020) 1 NC_009617.1 PFAM: dihydrouridine synthase, DuS; KEGG: cpf:CPF_1482 dihydrouridine synthase family protein; dihydrouridine synthase 3630020 5294288 Cbei_3105 Clostridium beijerinckii NCIMB 8052 dihydrouridine synthase YP_001310198.1 3629055 R 290402 CDS YP_001310199.1 150017945 5294289 complement(3630042..3630797) 1 NC_009617.1 PFAM: heat shock protein DnaJ domain protein; KEGG: mmu:639469 hypothetical protein LOC639469; heat shock protein DnaJ domain-containing protein 3630797 5294289 Cbei_3106 Clostridium beijerinckii NCIMB 8052 heat shock protein DnaJ domain-containing protein YP_001310199.1 3630042 R 290402 CDS YP_001310200.1 150017946 5294290 3631043..3631585 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: bld:BLi00563 TetR; TetR family transcriptional regulator 3631585 5294290 Cbei_3107 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001310200.1 3631043 D 290402 CDS YP_001310201.1 150017947 5294291 complement(3631717..3634851) 1 NC_009617.1 PFAM: MMPL domain protein; KEGG: cac:CA_P0102 membrane protein; MMPL domain-containing protein 3634851 5294291 Cbei_3108 Clostridium beijerinckii NCIMB 8052 MMPL domain-containing protein YP_001310201.1 3631717 R 290402 CDS YP_001310202.1 150017948 5294292 complement(3635312..3636265) 1 NC_009617.1 KEGG: cac:CAC2528 multimeric flavodoxin WrbA fused to cytochrome c-like domain; multimeric flavodoxin WrbA/cytochrome c-like domain-containing protein 3636265 5294292 Cbei_3109 Clostridium beijerinckii NCIMB 8052 multimeric flavodoxin WrbA/cytochrome c-like domain-containing protein YP_001310202.1 3635312 R 290402 CDS YP_001310203.1 150017949 5294293 3637170..3638426 1 NC_009617.1 KEGG: dsy:DSY0774 hypothetical protein; PucR family transcriptional regulator 3638426 5294293 Cbei_3110 Clostridium beijerinckii NCIMB 8052 PucR family transcriptional regulator YP_001310203.1 3637170 D 290402 CDS YP_001310204.1 150017950 5294294 complement(3638966..3639181) 1 NC_009617.1 PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: sth:STH1431 small acid-soluble spore protein; small acid-soluble spore protein, alpha/beta type 3639181 5294294 Cbei_3111 Clostridium beijerinckii NCIMB 8052 small acid-soluble spore protein, alpha/beta type YP_001310204.1 3638966 R 290402 CDS YP_001310205.1 150017951 5294295 3640071..3640976 1 NC_009617.1 KEGG: bha:BH1976 hypothetical protein; hypothetical protein 3640976 5294295 Cbei_3112 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310205.1 3640071 D 290402 CDS YP_001310206.1 150017952 5294296 3640992..3641198 1 NC_009617.1 hypothetical protein 3641198 5294296 Cbei_3113 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310206.1 3640992 D 290402 CDS YP_001310207.1 150017953 5294297 complement(3641323..3642093) 1 NC_009617.1 hypothetical protein 3642093 5294297 Cbei_3114 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310207.1 3641323 R 290402 CDS YP_001310208.1 150017954 5294298 3642387..3642905 1 NC_009617.1 KEGG: mmp:MMP0794 hypothetical protein; hypothetical protein 3642905 5294298 Cbei_3115 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310208.1 3642387 D 290402 CDS YP_001310209.1 150017955 5294299 complement(3643153..3643416) 1 NC_009617.1 KEGG: tpa:TP0072 hypothetical protein; glutaredoxin-like protein 3643416 5294299 Cbei_3116 Clostridium beijerinckii NCIMB 8052 glutaredoxin-like protein YP_001310209.1 3643153 R 290402 CDS YP_001310210.1 150017956 5296403 complement(3646174..3647424) 1 NC_009617.1 PFAM: amino acid permease-associated region; KEGG: mmp:MMP0850 amino acid/polyamine transporter; family I; amino acid permease-associated protein 3647424 5296403 Cbei_3118 Clostridium beijerinckii NCIMB 8052 amino acid permease-associated protein YP_001310210.1 3646174 R 290402 CDS YP_001310211.1 150017957 5294301 complement(3647598..3649307) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cno:NT01CX_1196 membrane associated methyl-accepting chemotaxis protein with HAMP domain; methyl-accepting chemotaxis sensory transducer 3649307 5294301 Cbei_3119 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001310211.1 3647598 R 290402 CDS YP_001310212.1 150017958 5294302 complement(3650325..3650975) 1 NC_009617.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 3650975 5294302 Cbei_3120 Clostridium beijerinckii NCIMB 8052 deoxyribose-phosphate aldolase YP_001310212.1 3650325 R 290402 CDS YP_001310213.1 150017959 5294303 complement(3651390..3652274) 1 NC_009617.1 PFAM: inner-membrane translocator; KEGG: cth:Cthe_1581 inner-membrane translocator; inner-membrane translocator 3652274 5294303 Cbei_3121 Clostridium beijerinckii NCIMB 8052 inner-membrane translocator YP_001310213.1 3651390 R 290402 CDS YP_001310214.1 150017960 5294304 complement(3652264..3653391) 1 NC_009617.1 PFAM: inner-membrane translocator; KEGG: cth:Cthe_1580 inner-membrane translocator; inner-membrane translocator 3653391 5294304 Cbei_3122 Clostridium beijerinckii NCIMB 8052 inner-membrane translocator YP_001310214.1 3652264 R 290402 CDS YP_001310215.1 150017961 5294305 complement(3653366..3654916) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cth:Cthe_1579 ABC transporter protein; ABC transporter 3654916 5294305 Cbei_3123 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001310215.1 3653366 R 290402 CDS YP_001310216.1 150017962 5294306 complement(3655027..3656079) 1 NC_009617.1 PFAM: basic membrane lipoprotein; KEGG: sth:STH1236 sugar ABC transporter substrate-binding protein; basic membrane lipoprotein 3656079 5294306 Cbei_3124 Clostridium beijerinckii NCIMB 8052 basic membrane lipoprotein YP_001310216.1 3655027 R 290402 CDS YP_001310217.1 150017963 5294307 complement(3656103..3656816) 1 NC_009617.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 3656816 deoD 5294307 deoD Clostridium beijerinckii NCIMB 8052 purine nucleoside phosphorylase YP_001310217.1 3656103 R 290402 CDS YP_001310218.1 150017964 5294308 complement(3656842..3657525) 1 NC_009617.1 KEGG: lac:LBA1353 hypothetical protein; hypothetical protein 3657525 5294308 Cbei_3126 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310218.1 3656842 R 290402 CDS YP_001310219.1 150017965 5294309 complement(3657550..3658740) 1 NC_009617.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 3658740 5294309 Cbei_3127 Clostridium beijerinckii NCIMB 8052 phosphopentomutase YP_001310219.1 3657550 R 290402 CDS YP_001310220.1 150017966 5294310 complement(3658816..3659217) 1 NC_009617.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: tte:TTE0462 Cytidine deaminase; cytidine deaminase 3659217 5294310 Cbei_3128 Clostridium beijerinckii NCIMB 8052 cytidine deaminase YP_001310220.1 3658816 R 290402 CDS YP_001310221.1 150017967 5294311 complement(3659251..3660036) 1 NC_009617.1 TIGRFAM: uridine phosphorylase; PFAM: purine or other phosphorylase, family 1; KEGG: cpf:CPF_0375 uridine phosphorylase; uridine phosphorylase 3660036 5294311 Cbei_3129 Clostridium beijerinckii NCIMB 8052 uridine phosphorylase YP_001310221.1 3659251 R 290402 CDS YP_001310222.1 150017968 5294312 3660421..3661161 1 NC_009617.1 PFAM: GntR family transcriptional regulator; KEGG: ctc:CTC01391 transcriptional regulatory protein; GntR family transcriptional regulator 3661161 5294312 Cbei_3130 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001310222.1 3660421 D 290402 CDS YP_001310223.1 150017969 5294313 3662001..3662324 1 NC_009617.1 hypothetical protein 3662324 5294313 Cbei_3131 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310223.1 3662001 D 290402 CDS YP_001310224.1 150017970 5294314 complement(3662456..3663487) 1 NC_009617.1 PFAM: conserved hypothetical protein 698; KEGG: cno:NT01CX_2345 hypothetical protein; hypothetical protein 3663487 5294314 Cbei_3132 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310224.1 3662456 R 290402 CDS YP_001310225.1 150017971 5294315 3663630..3664517 1 NC_009617.1 PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: cno:NT01CX_2344 transcription regulators, LysR family; LysR family transcriptional regulator 3664517 5294315 Cbei_3133 Clostridium beijerinckii NCIMB 8052 LysR family transcriptional regulator YP_001310225.1 3663630 D 290402 CDS YP_001310226.1 150017972 5294316 complement(3664948..3665967) 1 NC_009617.1 PFAM: aldo/keto reductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: gsu:GSU1370 oxidoreductase, aldo/keto reductase family; aldo/keto reductase 3665967 5294316 Cbei_3134 Clostridium beijerinckii NCIMB 8052 aldo/keto reductase YP_001310226.1 3664948 R 290402 CDS YP_001310227.1 150017973 5294317 complement(3666135..3667193) 1 NC_009617.1 KEGG: ctc:CTC00860 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein 3667193 5294317 Cbei_3135 Clostridium beijerinckii NCIMB 8052 D-galactose-binding periplasmic protein YP_001310227.1 3666135 R 290402 CDS YP_001310228.1 150017974 5294318 complement(3667443..3667952) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bat:BAS2637 acetyltransferase, GNAT family; N-acetyltransferase GCN5 3667952 5294318 Cbei_3136 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001310228.1 3667443 R 290402 CDS YP_001310229.1 150017975 5294319 complement(3668097..3668432) 1 NC_009617.1 PFAM: helix-turn-helix, HxlR type; KEGG: spm:spyM18_2160 hypothetical protein; HxlR family transcriptional regulator 3668432 5294319 Cbei_3137 Clostridium beijerinckii NCIMB 8052 HxlR family transcriptional regulator YP_001310229.1 3668097 R 290402 CDS YP_001310230.1 150017976 5294320 3668657..3668965 1 NC_009617.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: dsy:DSY3711 hypothetical protein; cupin 3668965 5294320 Cbei_3138 Clostridium beijerinckii NCIMB 8052 cupin YP_001310230.1 3668657 D 290402 CDS YP_001310231.1 150017977 5294321 3669059..3669481 1 NC_009617.1 KEGG: mmp:MMP0730 hypothetical protein; hypothetical protein 3669481 5294321 Cbei_3139 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310231.1 3669059 D 290402 CDS YP_001310232.1 150017978 5294322 complement(3669637..3670263) 1 NC_009617.1 PFAM: ThiJ/PfpI domain protein; KEGG: mba:Mbar_A0353 intracellular protease, ThiJ/PfpI family; ThiJ/PfpI domain-containing protein 3670263 5294322 Cbei_3140 Clostridium beijerinckii NCIMB 8052 ThiJ/PfpI domain-containing protein YP_001310232.1 3669637 R 290402 CDS YP_001310233.1 150017979 5294323 complement(3670315..3670497) 1 NC_009617.1 hypothetical protein 3670497 5294323 Cbei_3141 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310233.1 3670315 R 290402 CDS YP_001310234.1 150017980 5294324 3671036..3672079 1 NC_009617.1 KEGG: cpr:CPR_1341 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein 3672079 5294324 Cbei_3142 Clostridium beijerinckii NCIMB 8052 D-galactose-binding periplasmic protein YP_001310234.1 3671036 D 290402 CDS YP_001310235.1 150017981 5296404 3672696..3673274 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: dsy:DSY2841 hypothetical protein; TetR family transcriptional regulator 3673274 5296404 Cbei_3144 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001310235.1 3672696 D 290402 CDS YP_001310236.1 150017982 5294326 3673386..3674738 1 NC_009617.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: tde:TDE0931 MATE efflux family protein; MATE efflux family protein 3674738 5294326 Cbei_3145 Clostridium beijerinckii NCIMB 8052 MATE efflux family protein YP_001310236.1 3673386 D 290402 CDS YP_001310237.1 150017983 5296406 complement(3676313..3676963) 1 NC_009617.1 PFAM: type IV pilus assembly PilZ; KEGG: ctc:CTC01654 flagellar protein; type IV pilus assembly PilZ 3676963 5296406 Cbei_3148 Clostridium beijerinckii NCIMB 8052 type IV pilus assembly PilZ YP_001310237.1 3676313 R 290402 CDS YP_001310238.1 150017984 5294328 complement(3677461..3677748) 1 NC_009617.1 hypothetical protein 3677748 5294328 Cbei_3149 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310238.1 3677461 R 290402 CDS YP_001310239.1 150017985 5294329 complement(3678105..3679211) 1 NC_009617.1 KEGG: mba:Mbar_A0773 outer membrane protein expression inhibitor; outer membrane protein expression inhibitor 3679211 5294329 Cbei_3150 Clostridium beijerinckii NCIMB 8052 outer membrane protein expression inhibitor YP_001310239.1 3678105 R 290402 CDS YP_001310240.1 150017986 5294330 complement(3679330..3681405) 1 NC_009617.1 PFAM: UvrD/REP helicase; KEGG: cth:Cthe_2876 ATP-dependent DNA helicase PcrA; UvrD/REP helicase 3681405 5294330 Cbei_3151 Clostridium beijerinckii NCIMB 8052 UvrD/REP helicase YP_001310240.1 3679330 R 290402 CDS YP_001310241.1 150017987 5294331 complement(3681556..3684219) 1 NC_009617.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: bld:BLi02358 YprA; DEAD/DEAH box helicase 3684219 5294331 Cbei_3152 Clostridium beijerinckii NCIMB 8052 DEAD/DEAH box helicase YP_001310241.1 3681556 R 290402 CDS YP_001310242.1 150017988 5294332 complement(3685056..3685730) 1 NC_009617.1 hypothetical protein 3685730 5294332 Cbei_3153 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310242.1 3685056 R 290402 CDS YP_001310243.1 150017989 5294333 complement(3685832..3687229) 1 NC_009617.1 KEGG: syf:Synpcc7942_1164 hypothetical protein; hypothetical protein 3687229 5294333 Cbei_3154 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310243.1 3685832 R 290402 CDS YP_001310244.1 150017990 5294334 complement(3687286..3687507) 1 NC_009617.1 KEGG: cac:CAC0545 uncharacterized small protein, homolog of Treponema (6136517); hypothetical protein 3687507 5294334 Cbei_3155 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310244.1 3687286 R 290402 CDS YP_001310245.1 150017991 5294335 complement(3687596..3690577) 1 NC_009617.1 PFAM: type III restriction protein, res subunit; protein of unknown function DUF450; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: aav:Aave_3355 protein of unknown function DUF450; type III restriction protein, res subunit 3690577 5294335 Cbei_3156 Clostridium beijerinckii NCIMB 8052 type III restriction protein, res subunit YP_001310245.1 3687596 R 290402 CDS YP_001310246.1 150017992 5294336 complement(3690755..3691537) 1 NC_009617.1 PFAM: HNH endonuclease; HNH endonuclease 3691537 5294336 Cbei_3157 Clostridium beijerinckii NCIMB 8052 HNH endonuclease YP_001310246.1 3690755 R 290402 CDS YP_001310247.1 150017993 5294337 complement(3691542..3692477) 1 NC_009617.1 SMART: ATPase AAA; KEGG: hso:HS_1791 hypothetical protein; ATPase AAA 3692477 5294337 Cbei_3158 Clostridium beijerinckii NCIMB 8052 ATPase AAA YP_001310247.1 3691542 R 290402 CDS YP_001310248.1 150017994 5294338 complement(3692455..3693657) 1 NC_009617.1 PFAM: protein of unknown function DUF262; KEGG: ava:Ava_3592 protein of unknown function DUF262; hypothetical protein 3693657 5294338 Cbei_3159 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310248.1 3692455 R 290402 CDS YP_001310249.1 150017995 5294339 complement(3693758..3695167) 1 NC_009617.1 PFAM: restriction modification system DNA specificity domain; KEGG: sfr:Sfri_2607 restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit 3695167 5294339 Cbei_3160 Clostridium beijerinckii NCIMB 8052 restriction modification system DNA specificity subunit YP_001310249.1 3693758 R 290402 CDS YP_001310250.1 150017996 5294340 complement(3695167..3697188) 1 NC_009617.1 PFAM: N-6 DNA methylase; KEGG: mba:Mbar_A1016 type I restriction-modification system methyltransferase subunit; N-6 DNA methylase 3697188 5294340 Cbei_3161 Clostridium beijerinckii NCIMB 8052 N-6 DNA methylase YP_001310250.1 3695167 R 290402 CDS YP_001310251.1 150017997 5294341 3698001..3698573 1 NC_009617.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: cno:NT01CX_1545 sigma-70 region 2 domain protein; ECF subfamily RNA polymerase sigma-24 factor 3698573 5294341 Cbei_3162 Clostridium beijerinckii NCIMB 8052 ECF subfamily RNA polymerase sigma-24 factor YP_001310251.1 3698001 D 290402 CDS YP_001310252.1 150017998 5296407 complement(3699064..3700419) 1 NC_009617.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: mbu:Mbur_1925 MATE efflux family protein; MATE efflux family protein 3700419 5296407 Cbei_3164 Clostridium beijerinckii NCIMB 8052 MATE efflux family protein YP_001310252.1 3699064 R 290402 CDS YP_001310253.1 150017999 5294343 complement(3700478..3701353) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: bce:BC1115 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 3701353 5294343 Cbei_3165 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001310253.1 3700478 R 290402 CDS YP_001310254.1 150018000 5294344 3702446..3702646 1 NC_009617.1 hypothetical protein 3702646 5294344 Cbei_3166 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310254.1 3702446 D 290402 CDS YP_001310255.1 150018001 5294345 complement(3702779..3702919) 1 NC_009617.1 hypothetical protein 3702919 5294345 Cbei_3167 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310255.1 3702779 R 290402 CDS YP_001310256.1 150018002 5294346 complement(3703090..3703698) 1 NC_009617.1 PFAM: Phosphoglycerate mutase; KEGG: mac:MA3008 phosphoglycerate mutase family protein; phosphoglycerate mutase 3703698 5294346 Cbei_3168 Clostridium beijerinckii NCIMB 8052 phosphoglycerate mutase YP_001310256.1 3703090 R 290402 CDS YP_001310257.1 150018003 5294347 complement(3703834..3705666) 1 NC_009617.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cno:NT01CX_0224 sensory transduction histidine kinase; multi-sensor signal transduction histidine kinase 3705666 5294347 Cbei_3169 Clostridium beijerinckii NCIMB 8052 multi-sensor signal transduction histidine kinase YP_001310257.1 3703834 R 290402 CDS YP_001310258.1 150018004 5294348 complement(3705928..3706395) 1 NC_009617.1 KEGG: cpr:CPR_1533 hypothetical protein; hypothetical protein 3706395 5294348 Cbei_3170 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310258.1 3705928 R 290402 CDS YP_001310259.1 150018005 5294349 complement(3706589..3707272) 1 NC_009617.1 PFAM: Accessory gene regulator B; KEGG: cpr:CPR_1532 accessory gene regulator protein B; accessory gene regulator B 3707272 5294349 Cbei_3171 Clostridium beijerinckii NCIMB 8052 accessory gene regulator B YP_001310259.1 3706589 R 290402 CDS YP_001310260.1 150018006 5294350 complement(3707680..3708081) 1 NC_009617.1 PFAM: Resolvase helix-turn-helix domain protein; resolvase domain-containing protein 3708081 5294350 Cbei_3172 Clostridium beijerinckii NCIMB 8052 resolvase domain-containing protein YP_001310260.1 3707680 R 290402 CDS YP_001310261.1 150018007 5294351 complement(3708425..3708949) 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: cpr:CPR_0727 hypothetical protein; TetR family transcriptional regulator 3708949 5294351 Cbei_3173 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001310261.1 3708425 R 290402 CDS YP_001310262.1 150018008 5296408 3709826..3710794 1 NC_009617.1 KEGG: mac:MA1837 hypothetical protein; hypothetical protein 3710794 5296408 Cbei_3175 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310262.1 3709826 D 290402 CDS YP_001310263.1 150018009 5294353 complement(3711162..3711851) 1 NC_009617.1 TIGRFAM: aspartate racemase; PFAM: Asp/Glu racemase; KEGG: ssa:SSA_0042 amino acid recemase; aspartate racemase 3711851 5294353 Cbei_3176 Clostridium beijerinckii NCIMB 8052 aspartate racemase YP_001310263.1 3711162 R 290402 CDS YP_001310264.1 150018010 5294354 complement(3711982..3712869) 1 NC_009617.1 PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: cac:CAC0023 transcriptional regulator, LysR family; LysR family transcriptional regulator 3712869 5294354 Cbei_3177 Clostridium beijerinckii NCIMB 8052 LysR family transcriptional regulator YP_001310264.1 3711982 R 290402 CDS YP_001310265.1 150018011 5294355 3713001..3713612 1 NC_009617.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bat:BAS2278 transporter LysE family; lysine exporter protein LysE/YggA 3713612 5294355 Cbei_3178 Clostridium beijerinckii NCIMB 8052 lysine exporter protein LysE/YggA YP_001310265.1 3713001 D 290402 CDS YP_001310266.1 150018012 5296409 complement(3714117..3714836) 1 NC_009617.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ooe:OEOE_0396 carbonyl reductase; short-chain dehydrogenase/reductase SDR 3714836 5296409 Cbei_3180 Clostridium beijerinckii NCIMB 8052 short-chain dehydrogenase/reductase SDR YP_001310266.1 3714117 R 290402 CDS YP_001310267.1 150018013 5294357 3714970..3715863 1 NC_009617.1 PFAM: LysR family transcriptional regulator; KEGG: lpl:lp_3024 transcription regulator; LysR family transcriptional regulator 3715863 5294357 Cbei_3181 Clostridium beijerinckii NCIMB 8052 LysR family transcriptional regulator YP_001310267.1 3714970 D 290402 CDS YP_001310268.1 150018014 5294358 complement(3716134..3717096) 1 NC_009617.1 KEGG: bur:Bcep18194_C7591 alpha/beta superfamily-like hydrolase; alpha/beta fold family hydrolase 3717096 5294358 Cbei_3182 Clostridium beijerinckii NCIMB 8052 alpha/beta fold family hydrolase YP_001310268.1 3716134 R 290402 CDS YP_001310269.1 150018015 5294359 3717277..3717735 1 NC_009617.1 PFAM: regulatory protein, MerR; KEGG: oih:OB0785 transcriptional regulator; MerR family transcriptional regulator 3717735 5294359 Cbei_3183 Clostridium beijerinckii NCIMB 8052 MerR family transcriptional regulator YP_001310269.1 3717277 D 290402 CDS YP_001310270.1 150018016 5294360 complement(3718360..3719661) 1 NC_009617.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: swo:Swol_2463 RNA-directed DNA polymerase (reverse transcriptase); RNA-directed DNA polymerase 3719661 5294360 Cbei_3184 Clostridium beijerinckii NCIMB 8052 RNA-directed DNA polymerase YP_001310270.1 3718360 R 290402 CDS YP_001310271.1 150018017 5294361 complement(3720401..3722368) 1 NC_009617.1 PFAM: tRNA synthetase class I (M); KEGG: tko:TK1049 methionyl-tRNA synthetase; methionine--tRNA ligase 3722368 5294361 Cbei_3185 Clostridium beijerinckii NCIMB 8052 methionine--tRNA ligase YP_001310271.1 3720401 R 290402 CDS YP_001310272.1 150018018 5294362 complement(3723026..3723499) 1 NC_009617.1 hypothetical protein 3723499 5294362 Cbei_3186 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310272.1 3723026 R 290402 CDS YP_001310273.1 150018019 5294363 complement(3723713..3724411) 1 NC_009617.1 hypothetical protein 3724411 5294363 Cbei_3187 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310273.1 3723713 R 290402 CDS YP_001310274.1 150018020 5294364 complement(3724450..3725016) 1 NC_009617.1 hypothetical protein 3725016 5294364 Cbei_3188 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310274.1 3724450 R 290402 CDS YP_001310275.1 150018021 5294365 complement(3725172..3725699) 1 NC_009617.1 KEGG: chu:CHU_1296 hypothetical protein; hypothetical protein 3725699 5294365 Cbei_3189 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310275.1 3725172 R 290402 CDS YP_001310276.1 150018022 5294366 complement(3725758..3726123) 1 NC_009617.1 KEGG: bur:Bcep18194_C6624 hypothetical protein; hypothetical protein 3726123 5294366 Cbei_3190 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310276.1 3725758 R 290402 CDS YP_001310277.1 150018023 5294367 complement(3726186..3726515) 1 NC_009617.1 hypothetical protein 3726515 5294367 Cbei_3191 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310277.1 3726186 R 290402 CDS YP_001310278.1 150018024 5294368 complement(3726574..3727074) 1 NC_009617.1 KEGG: bca:BCE_3512 hypothetical protein; hypothetical protein 3727074 5294368 Cbei_3192 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310278.1 3726574 R 290402 CDS YP_001310279.1 150018025 5294369 complement(3727343..3727708) 1 NC_009617.1 hypothetical protein 3727708 5294369 Cbei_3193 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310279.1 3727343 R 290402 CDS YP_001310280.1 150018026 5294370 3728148..3728372 1 NC_009617.1 hypothetical protein 3728372 5294370 Cbei_3194 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310280.1 3728148 D 290402 CDS YP_001310281.1 150018027 5294371 3728541..3728759 1 NC_009617.1 KEGG: chy:CHY_0145 hypothetical protein; hypothetical protein 3728759 5294371 Cbei_3195 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310281.1 3728541 D 290402 CDS YP_001310282.1 150018028 5294372 complement(3728956..3729570) 1 NC_009617.1 hypothetical protein 3729570 5294372 Cbei_3196 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310282.1 3728956 R 290402 CDS YP_001310283.1 150018029 5294373 complement(3729942..3731156) 1 NC_009617.1 TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; Glycosyltransferase 28, C-terminal domain; KEGG: cac:CA_P0045 glycosyl transferase; glycosyl transferase family protein 3731156 5294373 Cbei_3197 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001310283.1 3729942 R 290402 CDS YP_001310284.1 150018030 5294374 complement(3731550..3732302) 1 NC_009617.1 PFAM: BRO domain protein domain protein; KEGG: cth:Cthe_2462 BRO-like protein; prophage antirepressor 3732302 5294374 Cbei_3198 Clostridium beijerinckii NCIMB 8052 prophage antirepressor YP_001310284.1 3731550 R 290402 CDS YP_001310285.1 150018031 5294375 complement(3732328..3732570) 1 NC_009617.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: chy:CHY_2622 transcriptional regulator, AbrB family; AbrB family transcriptional regulator 3732570 5294375 Cbei_3199 Clostridium beijerinckii NCIMB 8052 AbrB family transcriptional regulator YP_001310285.1 3732328 R 290402 CDS YP_001310286.1 150018032 5294376 complement(3733269..3733982) 1 NC_009617.1 KEGG: bha:BH3541 hypothetical protein; hypothetical protein 3733982 5294376 Cbei_3200 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310286.1 3733269 R 290402 CDS YP_001310287.1 150018033 5294377 complement(3733945..3734931) 1 NC_009617.1 TIGRFAM: primosome, DnaD subunit; phage replisome organizer, KEGG: lmo:lmo2317 similar to protein gp49; phage replisome organizer 3734931 5294377 Cbei_3201 Clostridium beijerinckii NCIMB 8052 phage replisome organizer YP_001310287.1 3733945 R 290402 CDS YP_001310288.1 150018034 5294378 3735500..3735883 1 NC_009617.1 KEGG: cpf:CPF_0989 hypothetical protein; hypothetical protein 3735883 5294378 Cbei_3202 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310288.1 3735500 D 290402 CDS YP_001310289.1 150018035 5294379 complement(3736629..3740969) 1 NC_009617.1 KEGG: cac:CAC3442 DNA polymerase III (alpha subunit); TIGRFAM: DNA polymerase III, epsilon subunit; DNA polymerase III, alpha subunit; PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; Exonuclease, RNase T and DNA polymerase III; SMART: phosphoesterase PHP domain protein; Exonuclease; DNA polymerase III subunit alpha 3740969 5294379 Cbei_3203 Clostridium beijerinckii NCIMB 8052 DNA polymerase III subunit alpha YP_001310289.1 3736629 R 290402 CDS YP_001310290.1 150018036 5294380 complement(3741483..3742100) 1 NC_009617.1 hypothetical protein 3742100 5294380 Cbei_3204 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310290.1 3741483 R 290402 CDS YP_001310291.1 150018037 5294381 3742770..3742964 1 NC_009617.1 KEGG: btl:BALH_1929 hypothetical protein; hypothetical protein 3742964 5294381 Cbei_3205 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310291.1 3742770 D 290402 CDS YP_001310292.1 150018038 5294382 complement(3743152..3745059) 1 NC_009617.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 3745059 thrS 5294382 thrS Clostridium beijerinckii NCIMB 8052 threonyl-tRNA synthetase YP_001310292.1 3743152 R 290402 CDS YP_001310293.1 150018039 5294383 complement(3746059..3747201) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: mac:MA4289 cell surface protein; cell wall binding repeat-containing protein 3747201 5294383 Cbei_3207 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001310293.1 3746059 R 290402 CDS YP_001310294.1 150018040 5294384 complement(3747756..3748319) 1 NC_009617.1 KEGG: cpf:CPF_0995 hypothetical protein; hypothetical protein 3748319 5294384 Cbei_3208 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310294.1 3747756 R 290402 CDS YP_001310295.1 150018041 5294385 complement(3748682..3748966) 1 NC_009617.1 hypothetical protein 3748966 5294385 Cbei_3209 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310295.1 3748682 R 290402 CDS YP_001310296.1 150018042 5294386 complement(3749017..3749913) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; regulatory protein, MarR; KEGG: bld:BLi00446 YbfA; MarR family transcriptional regulator 3749913 5294386 Cbei_3210 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001310296.1 3749017 R 290402 CDS YP_001310297.1 150018043 5294387 complement(3750204..3750833) 1 NC_009617.1 hypothetical protein 3750833 5294387 Cbei_3211 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310297.1 3750204 R 290402 CDS YP_001310298.1 150018044 5294388 complement(3751122..3751880) 1 NC_009617.1 hypothetical protein 3751880 5294388 Cbei_3212 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310298.1 3751122 R 290402 CDS YP_001310299.1 150018045 5294389 complement(3752062..3752736) 1 NC_009617.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: tko:TK0480 metal-dependent phosphohydrolase, HD superfamily; metal dependent phosphohydrolase 3752736 5294389 Cbei_3213 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001310299.1 3752062 R 290402 CDS YP_001310300.1 150018046 5294390 complement(3753061..3753927) 1 NC_009617.1 KEGG: dsy:DSY3634 hypothetical protein; hypothetical protein 3753927 5294390 Cbei_3214 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310300.1 3753061 R 290402 CDS YP_001310301.1 150018047 5294391 complement(3754227..3754790) 1 NC_009617.1 PFAM: nitroreductase; KEGG: fnu:FN1223 oxygen-insensitive NAD(P)H nitroreductase / dihydropteridine reductase; nitroreductase 3754790 5294391 Cbei_3215 Clostridium beijerinckii NCIMB 8052 nitroreductase YP_001310301.1 3754227 R 290402 CDS YP_001310302.1 150018048 5294392 3755098..3755298 1 NC_009617.1 hypothetical protein 3755298 5294392 Cbei_3216 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310302.1 3755098 D 290402 CDS YP_001310303.1 150018049 5294393 complement(3755868..3756527) 1 NC_009617.1 PFAM: chloramphenicol acetyltransferase; KEGG: btk:BT9727_2179 chloramphenicol O-acetyltransferase; chloramphenicol O-acetyltransferase 3756527 5294393 Cbei_3217 Clostridium beijerinckii NCIMB 8052 chloramphenicol O-acetyltransferase YP_001310303.1 3755868 R 290402 CDS YP_001310304.1 150018050 5294394 complement(3756891..3757400) 1 NC_009617.1 KEGG: ppr:PBPRB1295 hypothetical protein; hypothetical protein 3757400 5294394 Cbei_3218 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310304.1 3756891 R 290402 CDS YP_001310305.1 150018051 5294395 complement(3758212..3759477) 1 NC_009617.1 PFAM: sodium:dicarboxylate symporter; KEGG: cpf:CPF_0756 proton/sodium-glutamate symporter; sodium:dicarboxylate symporter 3759477 5294395 Cbei_3219 Clostridium beijerinckii NCIMB 8052 sodium:dicarboxylate symporter YP_001310305.1 3758212 R 290402 CDS YP_001310306.1 150018052 5294396 complement(3760120..3761580) 1 NC_009617.1 catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 3761580 5294396 Cbei_3220 Clostridium beijerinckii NCIMB 8052 aspartate ammonia-lyase YP_001310306.1 3760120 R 290402 CDS YP_001310307.1 150018053 5294397 3761749..3762705 1 NC_009617.1 PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: fnu:FN0603 transcriptional LysR family transcriptional regulator family; LysR family transcriptional regulator 3762705 5294397 Cbei_3221 Clostridium beijerinckii NCIMB 8052 LysR family transcriptional regulator YP_001310307.1 3761749 D 290402 CDS YP_001310308.1 150018054 5294398 complement(3762977..3763210) 1 NC_009617.1 KEGG: cac:CA_P0101 hypothetical protein; hypothetical protein 3763210 5294398 Cbei_3222 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310308.1 3762977 R 290402 CDS YP_001310309.1 150018055 5294399 complement(3763314..3763697) 1 NC_009617.1 hypothetical protein 3763697 5294399 Cbei_3223 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310309.1 3763314 R 290402 CDS YP_001310310.1 150018056 5294400 complement(3763856..3764197) 1 NC_009617.1 KEGG: mac:MA3537 hypothetical protein; hypothetical protein 3764197 5294400 Cbei_3224 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310310.1 3763856 R 290402 CDS YP_001310311.1 150018057 5294401 complement(3765591..3765764) 1 NC_009617.1 hypothetical protein 3765764 5294401 Cbei_3225 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310311.1 3765591 R 290402 CDS YP_001310312.1 150018058 5294402 complement(3765884..3766108) 1 NC_009617.1 hypothetical protein 3766108 5294402 Cbei_3226 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310312.1 3765884 R 290402 CDS YP_001310313.1 150018059 5294403 complement(3766446..3766802) 1 NC_009617.1 PFAM: Endoribonuclease L-PSP; KEGG: cac:CAC1077 translation initiation inhibitor; endoribonuclease L-PSP 3766802 5294403 Cbei_3227 Clostridium beijerinckii NCIMB 8052 endoribonuclease L-PSP YP_001310313.1 3766446 R 290402 CDS YP_001310314.1 150018060 5294404 complement(3766898..3767233) 1 NC_009617.1 hypothetical protein 3767233 5294404 Cbei_3228 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310314.1 3766898 R 290402 CDS YP_001310315.1 150018061 5294405 complement(3767659..3768267) 1 NC_009617.1 PFAM: ThiJ/PfpI domain protein; KEGG: cac:CAC2826 intracellular protease/amidase related enzyme (ThiJ family); ThiJ/PfpI domain-containing protein 3768267 5294405 Cbei_3229 Clostridium beijerinckii NCIMB 8052 ThiJ/PfpI domain-containing protein YP_001310315.1 3767659 R 290402 CDS YP_001310316.1 150018062 5296410 complement(3768867..3769142) 1 NC_009617.1 hypothetical protein 3769142 5296410 Cbei_3231 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310316.1 3768867 R 290402 CDS YP_001310317.1 150018063 5294407 3769614..3770243 1 NC_009617.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bcz:BCZK2333 methyltransferase; type 11 methyltransferase 3770243 5294407 Cbei_3232 Clostridium beijerinckii NCIMB 8052 type 11 methyltransferase YP_001310317.1 3769614 D 290402 CDS YP_001310318.1 150018064 5294408 complement(3770453..3770839) 1 NC_009617.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: efa:EF1902 glyoxylase family protein; glyoxalase/bleomycin resistance protein/dioxygenase 3770839 5294408 Cbei_3233 Clostridium beijerinckii NCIMB 8052 glyoxalase/bleomycin resistance protein/dioxygenase YP_001310318.1 3770453 R 290402 CDS YP_001310319.1 150018065 5294409 complement(3770984..3771595) 1 NC_009617.1 PFAM: protein of unknown function DUF214; KEGG: cno:NT01CX_1271 cell division protein FtsX; hypothetical protein 3771595 5294409 Cbei_3234 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310319.1 3770984 R 290402 CDS YP_001310320.1 150018066 5294410 complement(3772163..3772639) 1 NC_009617.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: cth:Cthe_1808 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein 3772639 5294410 Cbei_3235 Clostridium beijerinckii NCIMB 8052 transposase IS116/IS110/IS902 family protein YP_001310320.1 3772163 R 290402 CDS YP_001310321.1 150018067 5294411 complement(3772687..3773364) 1 NC_009617.1 PFAM: transposase, IS111A/IS1328/IS1533; KEGG: lac:LBA1723 transposase; transposase, IS111A/IS1328/IS1533 3773364 5294411 Cbei_3236 Clostridium beijerinckii NCIMB 8052 transposase, IS111A/IS1328/IS1533 YP_001310321.1 3772687 R 290402 CDS YP_001310322.1 150018068 5294412 complement(3773727..3774701) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: mac:MA4292 cell surface protein; cell wall binding repeat-containing protein 3774701 5294412 Cbei_3237 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001310322.1 3773727 R 290402 CDS YP_001310323.1 150018069 5294413 complement(3775250..3776137) 1 NC_009617.1 PFAM: alpha/beta hydrolase fold; KEGG: cac:CA_P0097 carboxyl esterase, a/b hydrolase; alpha/beta fold family hydrolase 3776137 5294413 Cbei_3238 Clostridium beijerinckii NCIMB 8052 alpha/beta fold family hydrolase YP_001310323.1 3775250 R 290402 CDS YP_001310324.1 150018070 5294414 complement(3776405..3777010) 1 NC_009617.1 KEGG: cno:NT01CX_1623 hypothetical protein; hypothetical protein 3777010 5294414 Cbei_3239 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310324.1 3776405 R 290402 CDS YP_001310325.1 150018071 5294415 complement(3777353..3777811) 1 NC_009617.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: dsy:DSY3711 hypothetical protein; cupin 3777811 5294415 Cbei_3240 Clostridium beijerinckii NCIMB 8052 cupin YP_001310325.1 3777353 R 290402 CDS YP_001310326.1 150018072 5294416 complement(3777954..3778385) 1 NC_009617.1 KEGG: oih:OB0269 hypothetical protein; hypothetical protein 3778385 5294416 Cbei_3241 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310326.1 3777954 R 290402 CDS YP_001310327.1 150018073 5294417 complement(3778840..3779457) 1 NC_009617.1 KEGG: mac:MA0740 hypothetical protein; hypothetical protein 3779457 5294417 Cbei_3242 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310327.1 3778840 R 290402 CDS YP_001310328.1 150018074 5294418 complement(3779832..3781070) 1 NC_009617.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Miro domain protein; KEGG: cac:CAC1651 predicted GTPase with uncharacterized domain, ortholog of T.maritima (4980952); small GTP-binding protein 3781070 5294418 Cbei_3243 Clostridium beijerinckii NCIMB 8052 small GTP-binding protein YP_001310328.1 3779832 R 290402 CDS YP_001310329.1 150018075 5294419 3781226..3782623 1 NC_009617.1 catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 3782623 aspA 5294419 aspA Clostridium beijerinckii NCIMB 8052 aspartate ammonia-lyase YP_001310329.1 3781226 D 290402 CDS YP_001310330.1 150018076 5294420 complement(3782681..3784186) 1 NC_009617.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: cpe:CPE2560 spore cortex-lytic enzyme; peptidoglycan binding domain-containing protein 3784186 5294420 Cbei_3245 Clostridium beijerinckii NCIMB 8052 peptidoglycan binding domain-containing protein YP_001310330.1 3782681 R 290402 CDS YP_001310331.1 150018077 5294421 3784583..3785158 1 NC_009617.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: chy:CHY_0552 hypothetical protein; type 11 methyltransferase 3785158 5294421 Cbei_3246 Clostridium beijerinckii NCIMB 8052 type 11 methyltransferase YP_001310331.1 3784583 D 290402 CDS YP_001310332.1 150018078 5294422 complement(3786227..3786391) 1 NC_009617.1 hypothetical protein 3786391 5294422 Cbei_3247 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310332.1 3786227 R 290402 CDS YP_001310333.1 150018079 5294423 complement(3787266..3787958) 1 NC_009617.1 KEGG: dsy:DSY4987 hypothetical protein; hypothetical protein 3787958 5294423 Cbei_3248 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310333.1 3787266 R 290402 CDS YP_001310334.1 150018080 5294424 complement(3788115..3788825) 1 NC_009617.1 PFAM: SNARE associated Golgi protein; KEGG: bha:BH2057 alkaline phosphatase; hypothetical protein 3788825 5294424 Cbei_3249 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310334.1 3788115 R 290402 CDS YP_001310335.1 150018081 5294425 complement(3789143..3789352) 1 NC_009617.1 PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: sth:STH1431 small acid-soluble spore protein; small acid-soluble spore protein, alpha/beta type 3789352 5294425 Cbei_3250 Clostridium beijerinckii NCIMB 8052 small acid-soluble spore protein, alpha/beta type YP_001310335.1 3789143 R 290402 CDS YP_001310336.1 150018082 5294426 complement(3789470..3789865) 1 NC_009617.1 hypothetical protein 3789865 5294426 Cbei_3251 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310336.1 3789470 R 290402 CDS YP_001310337.1 150018083 5294427 complement(3789965..3790837) 1 NC_009617.1 PFAM: protein of unknown function DUF161; KEGG: lmf:LMOf2365_2481 YitT family protein; hypothetical protein 3790837 5294427 Cbei_3252 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310337.1 3789965 R 290402 CDS YP_001310338.1 150018084 5294428 3790923..3791570 1 NC_009617.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: cac:CA_P0082 CRP (cyclic AMP receptor protein) regulatory protein; Crp/Fnr family transcriptional regulator 3791570 5294428 Cbei_3253 Clostridium beijerinckii NCIMB 8052 Crp/Fnr family transcriptional regulator YP_001310338.1 3790923 D 290402 CDS YP_001310339.1 150018085 5294429 complement(3791706..3792251) 1 NC_009617.1 hypothetical protein 3792251 5294429 Cbei_3254 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310339.1 3791706 R 290402 CDS YP_001310340.1 150018086 5294430 complement(3792306..3792638) 1 NC_009617.1 KEGG: cac:CAC1494 hypothetical protein, CF-32 family; hypothetical protein 3792638 5294430 Cbei_3255 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310340.1 3792306 R 290402 CDS YP_001310341.1 150018087 5294431 complement(3792993..3793370) 1 NC_009617.1 hypothetical protein 3793370 5294431 Cbei_3256 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310341.1 3792993 R 290402 CDS YP_001310342.1 150018088 5294432 complement(3793494..3794285) 1 NC_009617.1 PFAM: Rubrerythrin; KEGG: cno:NT01CX_1830 hypothetical protein; rubrerythrin 3794285 5294432 Cbei_3257 Clostridium beijerinckii NCIMB 8052 rubrerythrin YP_001310342.1 3793494 R 290402 CDS YP_001310343.1 150018089 5294433 3794564..3795007 1 NC_009617.1 hypothetical protein 3795007 5294433 Cbei_3258 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310343.1 3794564 D 290402 CDS YP_001310344.1 150018090 5294434 complement(3795124..3796125) 1 NC_009617.1 PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; KEGG: ppe:PEPE_0096 predicted dehydrogenase related protein; oxidoreductase domain-containing protein 3796125 5294434 Cbei_3259 Clostridium beijerinckii NCIMB 8052 oxidoreductase domain-containing protein YP_001310344.1 3795124 R 290402 CDS YP_001310345.1 150018091 5294435 complement(3796378..3797058) 1 NC_009617.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: btk:BT9727_5088 hydrolase, haloacid dehalogenase-like family; possible 2-haloacid dehalogenase; HAD family hydrolase 3797058 5294435 Cbei_3260 Clostridium beijerinckii NCIMB 8052 HAD family hydrolase YP_001310345.1 3796378 R 290402 CDS YP_001310346.1 150018092 5294436 3797569..3799179 1 NC_009617.1 PFAM: permease; KEGG: cno:NT01CX_2389 predicted permease superfamily; permease 3799179 5294436 Cbei_3261 Clostridium beijerinckii NCIMB 8052 permease YP_001310346.1 3797569 D 290402 CDS YP_001310347.1 150018093 5294437 3799712..3800530 1 NC_009617.1 PFAM: Protein of unknown function DUF1980; KEGG: ctc:CTC00938 membrane-spanning protein; hypothetical protein 3800530 5294437 Cbei_3262 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310347.1 3799712 D 290402 CDS YP_001310348.1 150018094 5294438 complement(3800644..3801381) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; cell wall binding repeat-containing protein 3801381 5294438 Cbei_3263 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001310348.1 3800644 R 290402 CDS YP_001310349.1 150018095 5294439 complement(3802094..3802300) 1 NC_009617.1 PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: cpr:CPR_1411 small, acid-soluble spore protein; small acid-soluble spore protein, alpha/beta type 3802300 5294439 Cbei_3264 Clostridium beijerinckii NCIMB 8052 small acid-soluble spore protein, alpha/beta type YP_001310349.1 3802094 R 290402 CDS YP_001310350.1 150018096 5294440 complement(3802437..3802826) 1 NC_009617.1 PFAM: amino acid-binding ACT domain protein; KEGG: dsy:DSY1559 hypothetical protein; amino acid-binding ACT domain-containing protein 3802826 5294440 Cbei_3265 Clostridium beijerinckii NCIMB 8052 amino acid-binding ACT domain-containing protein YP_001310350.1 3802437 R 290402 CDS YP_001310351.1 150018097 5294441 complement(3803262..3803900) 1 NC_009617.1 hypothetical protein 3803900 5294441 Cbei_3266 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310351.1 3803262 R 290402 CDS YP_001310352.1 150018098 5294442 complement(3805035..3806069) 1 NC_009617.1 PFAM: glycoside hydrolase, family 25; cell wall binding repeat-containing protein; KEGG: cac:CAC0554 autolytic lysozime (1,4-beta-N-acetylmuramidase), family 25 of glycosyl hydrolases ; peptodoglycan-binding domain; glycoside hydrolase 3806069 5294442 Cbei_3267 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001310352.1 3805035 R 290402 CDS YP_001310353.1 150018099 5294443 complement(3806167..3806424) 1 NC_009617.1 PFAM: Holin, phage phi LC3; KEGG: sak:SAK_0652 prophage LambdaSa03, holin, phi LC3 family; holin, phage phi LC3 3806424 5294443 Cbei_3268 Clostridium beijerinckii NCIMB 8052 holin, phage phi LC3 YP_001310353.1 3806167 R 290402 CDS YP_001310354.1 150018100 5294444 complement(3806768..3807028) 1 NC_009617.1 KEGG: eca:ECA1998 hypothetical protein; hypothetical protein 3807028 5294444 Cbei_3269 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310354.1 3806768 R 290402 CDS YP_001310355.1 150018101 5294445 complement(3807332..3807487) 1 NC_009617.1 hypothetical protein 3807487 5294445 Cbei_3270 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310355.1 3807332 R 290402 CDS YP_001310356.1 150018102 5294446 complement(3807658..3809103) 1 NC_009617.1 PFAM: glycoside hydrolase, family 1; KEGG: cac:CAC1408 phospho-beta-glucosidase; glycoside hydrolase 3809103 5294446 Cbei_3271 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001310356.1 3807658 R 290402 CDS YP_001310357.1 150018103 5294447 complement(3809175..3810575) 1 NC_009617.1 KEGG: smu:SMU.772 glucan-binding protein D; BglB-like protein; glucan-binding protein D 3810575 5294447 Cbei_3272 Clostridium beijerinckii NCIMB 8052 glucan-binding protein D YP_001310357.1 3809175 R 290402 CDS YP_001310358.1 150018104 5294448 complement(3810670..3812574) 1 NC_009617.1 TIGRFAM: PTS system, glucose subfamily, IIA subunit; PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose-like IIB subunint; PFAM: sugar-specific permease, EIIA 1 domain; phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: cac:CAC1407 PTS system, beta-glucosides-specific IIABC component; PTS system beta-glucoside-specific transporter subunit IIABC 3812574 5294448 Cbei_3273 Clostridium beijerinckii NCIMB 8052 PTS system beta-glucoside-specific transporter subunit IIABC YP_001310358.1 3810670 R 290402 CDS YP_001310359.1 150018105 5294449 complement(3812908..3813738) 1 NC_009617.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: cac:CAC1406 transcriptional antiterminator (BglG family); transcriptional antiterminator BglG 3813738 5294449 Cbei_3274 Clostridium beijerinckii NCIMB 8052 transcriptional antiterminator BglG YP_001310359.1 3812908 R 290402 CDS YP_001310360.1 150018106 5294450 complement(3814296..3814505) 1 NC_009617.1 PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: sth:STH1431 small acid-soluble spore protein; small acid-soluble spore protein, alpha/beta type 3814505 5294450 Cbei_3275 Clostridium beijerinckii NCIMB 8052 small acid-soluble spore protein, alpha/beta type YP_001310360.1 3814296 R 290402 CDS YP_001310361.1 150018107 5294451 complement(3814787..3816193) 1 NC_009617.1 PFAM: amino acid permease-associated region; KEGG: cac:CAC3285 predicted amino acid transporter; amino acid permease-associated protein 3816193 5294451 Cbei_3276 Clostridium beijerinckii NCIMB 8052 amino acid permease-associated protein YP_001310361.1 3814787 R 290402 CDS YP_001310362.1 150018108 5294452 complement(3816673..3817329) 1 NC_009617.1 PFAM: class II aldolase/adducin family protein; KEGG: tte:TTE1592 ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; class II aldolase/adducin family protein 3817329 5294452 Cbei_3277 Clostridium beijerinckii NCIMB 8052 class II aldolase/adducin family protein YP_001310362.1 3816673 R 290402 CDS YP_001310363.1 150018109 5294453 complement(3817339..3818886) 1 NC_009617.1 PFAM: coenzyme A transferase; KEGG: ctc:CTC00478 acetyl-coA:acetoacetyl-coA transferase alpha subunit; coenzyme A transferase 3818886 5294453 Cbei_3278 Clostridium beijerinckii NCIMB 8052 coenzyme A transferase YP_001310363.1 3817339 R 290402 CDS YP_001310364.1 150018110 5294454 complement(3819498..3820388) 1 NC_009617.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mba:Mbar_A1437 cobalt-zinc-cadmium resistance protein; cation diffusion facilitator family transporter 3820388 5294454 Cbei_3279 Clostridium beijerinckii NCIMB 8052 cation diffusion facilitator family transporter YP_001310364.1 3819498 R 290402 CDS YP_001310365.1 150018111 5294455 complement(3821051..3821548) 1 NC_009617.1 KEGG: san:gbs1152 hypothetical protein; hypothetical protein 3821548 5294455 Cbei_3280 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310365.1 3821051 R 290402 CDS YP_001310366.1 150018112 5296411 complement(3824214..3825035) 1 NC_009617.1 PFAM: NUDIX hydrolase; NADH pyrophosphatase-like-like; Zinc ribbon, NADH pyrophosphatase; KEGG: cac:CAC3396 Nudix (MutT) family hydrolase, C4-type Zn-finger domain containing; NUDIX hydrolase 3825035 5296411 Cbei_3282 Clostridium beijerinckii NCIMB 8052 NUDIX hydrolase YP_001310366.1 3824214 R 290402 CDS YP_001310367.1 150018113 5294457 complement(3825291..3825734) 1 NC_009617.1 KEGG: pfa:MAL1P2.10 hypothetical protein; hypothetical protein 3825734 5294457 Cbei_3283 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310367.1 3825291 R 290402 CDS YP_001310368.1 150018114 5294458 complement(3826389..3827531) 1 NC_009617.1 KEGG: cpr:CPR_0992 hypothetical protein; hypothetical protein 3827531 5294458 Cbei_3284 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310368.1 3826389 R 290402 CDS YP_001310369.1 150018115 5294459 complement(3827843..3828280) 1 NC_009617.1 KEGG: cpf:CPF_0742 hypothetical protein; hypothetical protein 3828280 5294459 Cbei_3285 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310369.1 3827843 R 290402 CDS YP_001310370.1 150018116 5294460 complement(3829321..3829578) 1 NC_009617.1 hypothetical protein 3829578 5294460 Cbei_3286 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310370.1 3829321 R 290402 CDS YP_001310371.1 150018117 5296412 complement(3830387..3831370) 1 NC_009617.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: cth:Cthe_1293 metal dependent phosphohydrolase; metal dependent phosphohydrolase 3831370 5296412 Cbei_3288 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001310371.1 3830387 R 290402 CDS YP_001310372.1 150018118 5294462 complement(3832282..3832566) 1 NC_009617.1 hypothetical protein 3832566 5294462 Cbei_3289 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310372.1 3832282 R 290402 CDS YP_001310373.1 150018119 5294463 complement(3832707..3833501) 1 NC_009617.1 PFAM: polysaccharide deacetylase; KEGG: cno:NT01CX_1505 predicted xylanase/chitin deacetylase; polysaccharide deacetylase 3833501 5294463 Cbei_3290 Clostridium beijerinckii NCIMB 8052 polysaccharide deacetylase YP_001310373.1 3832707 R 290402 CDS YP_001310374.1 150018120 5294464 complement(3833771..3834241) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC2935 predicted acetyltransferase; N-acetyltransferase GCN5 3834241 5294464 Cbei_3291 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001310374.1 3833771 R 290402 CDS YP_001310375.1 150018121 5294465 complement(3834441..3834872) 1 NC_009617.1 KEGG: dsy:DSY0685 hypothetical protein; hypothetical protein 3834872 5294465 Cbei_3292 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310375.1 3834441 R 290402 CDS YP_001310376.1 150018122 5294466 complement(3835117..3835440) 1 NC_009617.1 PFAM: Thioredoxin domain; KEGG: cpf:CPF_1847 thioredoxin family protein; thioredoxin domain-containing protein 3835440 5294466 Cbei_3293 Clostridium beijerinckii NCIMB 8052 thioredoxin domain-containing protein YP_001310376.1 3835117 R 290402 CDS YP_001310377.1 150018123 5294467 complement(3835442..3835903) 1 NC_009617.1 KEGG: cpf:CPF_1303 hypothetical protein; hypothetical protein 3835903 5294467 Cbei_3294 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310377.1 3835442 R 290402 CDS YP_001310378.1 150018124 5294468 complement(3836239..3836802) 1 NC_009617.1 KEGG: hch:HCH_01166 ABC-type sugar transport system, periplasmic component; sugar ABC transporter periplasmic protein 3836802 5294468 Cbei_3295 Clostridium beijerinckii NCIMB 8052 sugar ABC transporter periplasmic protein YP_001310378.1 3836239 R 290402 CDS YP_001310379.1 150018125 5294469 complement(3836854..3837177) 1 NC_009617.1 KEGG: dsy:DSY2272 hypothetical protein; hypothetical protein 3837177 5294469 Cbei_3296 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310379.1 3836854 R 290402 CDS YP_001310380.1 150018126 5294470 complement(3837215..3837439) 1 NC_009617.1 hypothetical protein 3837439 5294470 Cbei_3297 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310380.1 3837215 R 290402 CDS YP_001310381.1 150018127 5294471 complement(3837523..3838575) 1 NC_009617.1 KEGG: cpe:CPE1341 probable galactoside ABC transporter; galactoside ABC transporter 3838575 5294471 Cbei_3298 Clostridium beijerinckii NCIMB 8052 galactoside ABC transporter YP_001310381.1 3837523 R 290402 CDS YP_001310382.1 150018128 5294472 complement(3838812..3840743) 1 NC_009617.1 PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC3415 ABC-type multidrug/protein/lipid transport system, ATPase component; multidrug ABC transporter ATPase 3840743 5294472 Cbei_3299 Clostridium beijerinckii NCIMB 8052 multidrug ABC transporter ATPase YP_001310382.1 3838812 R 290402 CDS YP_001310383.1 150018129 5294473 complement(3840736..3842469) 1 NC_009617.1 PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC3414 ABC-type multidrug/protein/lipid transport system, ATPase component; multidrug ABC transporter ATPase 3842469 5294473 Cbei_3300 Clostridium beijerinckii NCIMB 8052 multidrug ABC transporter ATPase YP_001310383.1 3840736 R 290402 CDS YP_001310384.1 150018130 5294474 complement(3842750..3843181) 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: cac:CAC3413 transcriptional regulator, MarR/EmrR family; MarR family transcriptional regulator 3843181 5294474 Cbei_3301 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001310384.1 3842750 R 290402 CDS YP_001310385.1 150018131 5294475 3843559..3844890 1 NC_009617.1 KEGG: ctc:CTC00453 sialidase; hypothetical protein 3844890 5294475 Cbei_3302 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310385.1 3843559 D 290402 CDS YP_001310386.1 150018132 5294476 complement(3845151..3846938) 1 NC_009617.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CBS domain containing protein; EAL domain protein; KEGG: cac:CAC2702 possible signal transduction protein (containing EAL, CBS and GGDEF domains); diguanylate cyclase/phosphodiesterase 3846938 5294476 Cbei_3303 Clostridium beijerinckii NCIMB 8052 diguanylate cyclase/phosphodiesterase YP_001310386.1 3845151 R 290402 CDS YP_001310387.1 150018133 5294477 3847166..3847888 1 NC_009617.1 KEGG: cac:CAC3401 predicted membrane protein; hypothetical protein 3847888 5294477 Cbei_3304 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310387.1 3847166 D 290402 CDS YP_001310388.1 150018134 5294478 complement(3848106..3848666) 1 NC_009617.1 KEGG: cno:NT01CX_0007 hypothetical protein; hypothetical protein 3848666 5294478 Cbei_3305 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310388.1 3848106 R 290402 CDS YP_001310389.1 150018135 5294479 complement(3848865..3849608) 1 NC_009617.1 KEGG: cpf:CPF_0796 hypothetical protein; hypothetical protein 3849608 5294479 Cbei_3306 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310389.1 3848865 R 290402 CDS YP_001310390.1 150018136 5294480 complement(3849778..3850476) 1 NC_009617.1 PFAM: beta-lactamase domain protein; KEGG: cac:CAC1386 Zn-dependent hydrolase, glyoxylase family; beta-lactamase domain-containing protein 3850476 5294480 Cbei_3307 Clostridium beijerinckii NCIMB 8052 beta-lactamase domain-containing protein YP_001310390.1 3849778 R 290402 CDS YP_001310391.1 150018137 5294481 complement(3850499..3852349) 1 NC_009617.1 PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY1091 hypothetical protein; ABC transporter 3852349 5294481 Cbei_3308 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001310391.1 3850499 R 290402 CDS YP_001310392.1 150018138 5294482 complement(3852356..3854074) 1 NC_009617.1 PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY1090 hypothetical protein; ABC transporter 3854074 5294482 Cbei_3309 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001310392.1 3852356 R 290402 CDS YP_001310393.1 150018139 5294483 complement(3854246..3854650) 1 NC_009617.1 PFAM: regulatory protein, MerR; KEGG: oih:OB0785 transcriptional regulator; MerR family transcriptional regulator 3854650 5294483 Cbei_3310 Clostridium beijerinckii NCIMB 8052 MerR family transcriptional regulator YP_001310393.1 3854246 R 290402 CDS YP_001310394.1 150018140 5294484 3855060..3856043 1 NC_009617.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rle:RL1385 short-chain dehydrogenase/oxidoreductase; short-chain dehydrogenase/reductase SDR 3856043 5294484 Cbei_3311 Clostridium beijerinckii NCIMB 8052 short-chain dehydrogenase/reductase SDR YP_001310394.1 3855060 D 290402 CDS YP_001310395.1 150018141 5294485 3856258..3856542 1 NC_009617.1 hypothetical protein 3856542 5294485 Cbei_3312 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310395.1 3856258 D 290402 CDS YP_001310396.1 150018142 5294486 complement(3856628..3857761) 1 NC_009617.1 KEGG: spo:SPBC582.06c hypothetical protein; hypothetical protein 3857761 5294486 Cbei_3313 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310396.1 3856628 R 290402 CDS YP_001310397.1 150018143 5294487 3858136..3859842 1 NC_009617.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: tdn:Tmden_1328 diguanylate cyclase (GGDEF domain); diguanylate cyclase 3859842 5294487 Cbei_3314 Clostridium beijerinckii NCIMB 8052 diguanylate cyclase YP_001310397.1 3858136 D 290402 CDS YP_001310398.1 150018144 5294488 complement(3859908..3860273) 1 NC_009617.1 PFAM: helix-turn-helix, HxlR type; KEGG: cac:CAC0195 predicted transcriptional regulator; HxlR family transcriptional regulator 3860273 5294488 Cbei_3315 Clostridium beijerinckii NCIMB 8052 HxlR family transcriptional regulator YP_001310398.1 3859908 R 290402 CDS YP_001310399.1 150018145 5294489 3860403..3861458 1 NC_009617.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: cac:CAC0196 NADH-dependent flavine oxidoreductase; NADH:flavin oxidoreductase 3861458 5294489 Cbei_3316 Clostridium beijerinckii NCIMB 8052 NADH:flavin oxidoreductase YP_001310399.1 3860403 D 290402 CDS YP_001310400.1 150018146 5294490 complement(3861684..3862940) 1 NC_009617.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: cac:CA_P0029 permease MDR-related; major facilitator superfamily transporter 3862940 5294490 Cbei_3317 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001310400.1 3861684 R 290402 CDS YP_001310401.1 150018147 5294491 3863139..3863702 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: cac:CA_P0028 HTH transcriptional regulator TetR family; TetR family transcriptional regulator 3863702 5294491 Cbei_3318 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001310401.1 3863139 D 290402 CDS YP_001310402.1 150018148 5294492 3863950..3864438 1 NC_009617.1 hypothetical protein 3864438 5294492 Cbei_3319 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310402.1 3863950 D 290402 CDS YP_001310403.1 150018149 5294493 complement(3864570..3866582) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC00942 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 3866582 5294493 Cbei_3320 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001310403.1 3864570 R 290402 CDS YP_001310404.1 150018150 5294494 complement(3867037..3868413) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cno:NT01CX_1433 subtilin biosynthesis sensor protein SpaK; integral membrane sensor signal transduction histidine kinase 3868413 5294494 Cbei_3321 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001310404.1 3867037 R 290402 CDS YP_001310405.1 150018151 5294495 complement(3868401..3869063) 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cno:NT01CX_1432 subtilin biosynthesis regulatory protein SpaR; two component transcriptional regulator 3869063 5294495 Cbei_3322 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001310405.1 3868401 R 290402 CDS YP_001310406.1 150018152 5294496 complement(3869131..3869907) 1 NC_009617.1 KEGG: cno:NT01CX_1431 antibiotic transport-associated permease SpaG/MutG; antibiotic transport-associated permease SpaG/MutG 3869907 5294496 Cbei_3323 Clostridium beijerinckii NCIMB 8052 antibiotic transport-associated permease SpaG/MutG YP_001310406.1 3869131 R 290402 CDS YP_001310407.1 150018153 5294497 complement(3869912..3870664) 1 NC_009617.1 KEGG: ctc:CTC00626 lantibiotic permease spaE/mutE; lantibiotic permease spaE/mutE 3870664 5294497 Cbei_3324 Clostridium beijerinckii NCIMB 8052 lantibiotic permease spaE/mutE YP_001310407.1 3869912 R 290402 CDS YP_001310408.1 150018154 5294498 complement(3870664..3871368) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ctc:CTC00625 lantibiotic transport ATP-binding protein spaF/mutF; ABC transporter 3871368 5294498 Cbei_3325 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001310408.1 3870664 R 290402 CDS YP_001310409.1 150018155 5294499 complement(3871678..3872313) 1 NC_009617.1 PFAM: protein of unknown function DUF975; KEGG: btk:BT9727_4984 hypothetical protein; hypothetical protein 3872313 5294499 Cbei_3326 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310409.1 3871678 R 290402 CDS YP_001310410.1 150018156 5294500 complement(3872706..3874043) 1 NC_009617.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: cac:CAC0460 CBS-domain containing protein, YHDP B.subtilis ortholog; hypothetical protein 3874043 5294500 Cbei_3327 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310410.1 3872706 R 290402 CDS YP_001310411.1 150018157 5294501 complement(3874383..3875606) 1 NC_009617.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: dsy:DSY4471 hypothetical protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3875606 5294501 Cbei_3328 Clostridium beijerinckii NCIMB 8052 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001310411.1 3874383 R 290402 CDS YP_001310412.1 150018158 5294502 complement(3875615..3875941) 1 NC_009617.1 PFAM: glutaredoxin 2; Thioredoxin domain; KEGG: dsy:DSY0299 hypothetical protein; thioredoxin domain-containing protein 3875941 5294502 Cbei_3329 Clostridium beijerinckii NCIMB 8052 thioredoxin domain-containing protein YP_001310412.1 3875615 R 290402 CDS YP_001310413.1 150018159 5294503 complement(3876184..3878232) 1 NC_009617.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: dsy:DSY5011 hypothetical protein; type I phosphodiesterase/nucleotide pyrophosphatase 3878232 5294503 Cbei_3330 Clostridium beijerinckii NCIMB 8052 type I phosphodiesterase/nucleotide pyrophosphatase YP_001310413.1 3876184 R 290402 CDS YP_001310414.1 150018160 5294504 complement(3878376..3879203) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ctc:CTC01394 taurine transport ATP-binding protein tauB; ABC transporter 3879203 5294504 Cbei_3331 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001310414.1 3878376 R 290402 CDS YP_001310415.1 150018161 5294505 complement(3879219..3880259) 1 NC_009617.1 TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein, family 3; KEGG: ctc:CTC01393 taurine-binding periplasmic protein precursor; aliphatic sulfonate ABC transporter periplasmic protein 3880259 5294505 Cbei_3332 Clostridium beijerinckii NCIMB 8052 aliphatic sulfonate ABC transporter periplasmic protein YP_001310415.1 3879219 R 290402 CDS YP_001310416.1 150018162 5294506 complement(3880358..3881167) 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ctc:CTC01392 taurine transport system permease tauC; taurine ABC transporter permease 3881167 5294506 Cbei_3333 Clostridium beijerinckii NCIMB 8052 taurine ABC transporter permease YP_001310416.1 3880358 R 290402 CDS YP_001310417.1 150018163 5294507 complement(3881983..3882327) 1 NC_009617.1 hypothetical protein 3882327 5294507 Cbei_3334 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310417.1 3881983 R 290402 CDS YP_001310418.1 150018164 5294508 complement(3882745..3883392) 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: cac:CAC0019 transcriptional regulator, AcrR family; TetR family transcriptional regulator 3883392 5294508 Cbei_3335 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001310418.1 3882745 R 290402 CDS YP_001310419.1 150018165 5294509 3883545..3884864 1 NC_009617.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC0020 MDR-type permease; EmrB/QacA family drug resistance transporter 3884864 5294509 Cbei_3336 Clostridium beijerinckii NCIMB 8052 EmrB/QacA family drug resistance transporter YP_001310419.1 3883545 D 290402 CDS YP_001310420.1 150018166 5294510 3884934..3885212 1 NC_009617.1 hypothetical protein 3885212 5294510 Cbei_3337 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310420.1 3884934 D 290402 CDS YP_001310421.1 150018167 5294511 complement(3885590..3885895) 1 NC_009617.1 KEGG: cac:CAC0562 predicted membrane protein; hypothetical protein 3885895 5294511 Cbei_3338 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310421.1 3885590 R 290402 CDS YP_001310422.1 150018168 5294512 complement(3885888..3886415) 1 NC_009617.1 KEGG: ctc:CTC00433 hypothetical protein; hypothetical protein 3886415 5294512 Cbei_3339 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310422.1 3885888 R 290402 CDS YP_001310423.1 150018169 5294513 complement(3886396..3886848) 1 NC_009617.1 hypothetical protein 3886848 5294513 Cbei_3340 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310423.1 3886396 R 290402 CDS YP_001310424.1 150018170 5294514 complement(3886845..3887360) 1 NC_009617.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: sth:STH907 RNA polymerase ECF-type sigma factor; ECF subfamily RNA polymerase sigma-24 factor 3887360 5294514 Cbei_3341 Clostridium beijerinckii NCIMB 8052 ECF subfamily RNA polymerase sigma-24 factor YP_001310424.1 3886845 R 290402 CDS YP_001310425.1 150018171 5296413 3887784..3888830 1 NC_009617.1 KEGG: cpr:CPR_1341 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein 3888830 5296413 Cbei_3343 Clostridium beijerinckii NCIMB 8052 D-galactose-binding periplasmic protein YP_001310425.1 3887784 D 290402 CDS YP_001310426.1 150018172 5294516 complement(3888977..3889402) 1 NC_009617.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA subunit; PFAM: PTS system fructose subfamily IIA component; KEGG: yps:YPTB1634 PTS system, mannose-specific IIAB component; PTS system mannose/fructose/sorbose family transporter subunit IIA 3889402 5294516 Cbei_3344 Clostridium beijerinckii NCIMB 8052 PTS system mannose/fructose/sorbose family transporter subunit IIA YP_001310426.1 3888977 R 290402 CDS YP_001310427.1 150018173 5294517 3889512..3890426 1 NC_009617.1 PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: cac:CAC3494 transcription regulator, YOBV B.subtilis homolog; helix-turn-helix, type 11 domain-containing protein 3890426 5294517 Cbei_3345 Clostridium beijerinckii NCIMB 8052 helix-turn-helix, type 11 domain-containing protein YP_001310427.1 3889512 D 290402 CDS YP_001310428.1 150018174 5294518 3890585..3891706 1 NC_009617.1 KEGG: lsa:LSA0809 DNA alkylation repair enzyme; DNA alkylation repair protein 3891706 5294518 Cbei_3346 Clostridium beijerinckii NCIMB 8052 DNA alkylation repair protein YP_001310428.1 3890585 D 290402 CDS YP_001310429.1 150018175 5294519 3892002..3893060 1 NC_009617.1 KEGG: cpe:CPE1341 probable galactoside ABC transporter; galactoside ABC transporter 3893060 5294519 Cbei_3347 Clostridium beijerinckii NCIMB 8052 galactoside ABC transporter YP_001310429.1 3892002 D 290402 CDS YP_001310430.1 150018176 5294520 3893426..3893809 1 NC_009617.1 TIGRFAM: desulfoferrodoxin; PFAM: Desulfoferrodoxin, ferrous iron-binding region; Desulfoferrodoxin Dfx domain protein; KEGG: ctc:CTC02454 desulfoferrodoxin homolog; desulfoferrodoxin 3893809 5294520 Cbei_3348 Clostridium beijerinckii NCIMB 8052 desulfoferrodoxin YP_001310430.1 3893426 D 290402 CDS YP_001310431.1 150018177 5294521 complement(3894070..3894486) 1 NC_009617.1 PFAM: MaoC domain protein dehydratase; KEGG: tte:TTE0551 predicted acyl dehydratase; dehydratase 3894486 5294521 Cbei_3349 Clostridium beijerinckii NCIMB 8052 dehydratase YP_001310431.1 3894070 R 290402 CDS YP_001310432.1 150018178 5294522 complement(3894551..3895945) 1 NC_009617.1 PFAM: Gluconate transporter; Citrate transporter; KEGG: ctc:CTC00709 integral membrane permease; citrate transporter 3895945 5294522 Cbei_3350 Clostridium beijerinckii NCIMB 8052 citrate transporter YP_001310432.1 3894551 R 290402 CDS YP_001310433.1 150018179 5294523 complement(3896020..3897564) 1 NC_009617.1 PFAM: coenzyme A transferase; KEGG: ctc:CTC00708 acetyl-coA:acetoacetyl-coA transferase alpha subunit; coenzyme A transferase 3897564 5294523 Cbei_3351 Clostridium beijerinckii NCIMB 8052 coenzyme A transferase YP_001310433.1 3896020 R 290402 CDS YP_001310434.1 150018180 5294524 complement(3897854..3899578) 1 NC_009617.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; PAS fold domain protein; SMART: PAS domain containing protein; ATPase AAA; KEGG: ctc:CTC00707 transcriptional regulatory protein; sigma-54 dependent trancsriptional regulator 3899578 5294524 Cbei_3352 Clostridium beijerinckii NCIMB 8052 sigma-54 dependent trancsriptional regulator YP_001310434.1 3897854 R 290402 CDS YP_001310435.1 150018181 5294525 3900099..3900899 1 NC_009617.1 PFAM: glycoside hydrolase, family 18; SMART: chitinase II; KEGG: bha:BH0916 chitinase; glycoside hydrolase 3900899 5294525 Cbei_3353 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001310435.1 3900099 D 290402 CDS YP_001310436.1 150018182 5294526 complement(3901043..3901678) 1 NC_009617.1 PFAM: NADPH-dependent FMN reductase; KEGG: cac:CAC3486 multimeric flavodoxin WrbA family protein; NADPH-dependent FMN reductase 3901678 5294526 Cbei_3354 Clostridium beijerinckii NCIMB 8052 NADPH-dependent FMN reductase YP_001310436.1 3901043 R 290402 CDS YP_001310437.1 150018183 5294527 3902031..3902372 1 NC_009617.1 PFAM: helix-turn-helix, HxlR type; KEGG: cac:CAC3487 predicted transcriptional regulator; HxlR family transcriptional regulator 3902372 5294527 Cbei_3355 Clostridium beijerinckii NCIMB 8052 HxlR family transcriptional regulator YP_001310437.1 3902031 D 290402 CDS YP_001310438.1 150018184 5294528 3902990..3904702 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01211 methyl-accepting chemotaxis protein TlpA; methyl-accepting chemotaxis sensory transducer 3904702 5294528 Cbei_3356 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001310438.1 3902990 D 290402 CDS YP_001310439.1 150018185 5294529 complement(3905019..3905864) 1 NC_009617.1 hypothetical protein 3905864 5294529 Cbei_3357 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310439.1 3905019 R 290402 CDS YP_001310440.1 150018186 5294530 complement(3906105..3907565) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cac:CAC1507 sensory transduction histidine kinase (with HAMP domain); integral membrane sensor signal transduction histidine kinase 3907565 5294530 Cbei_3358 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001310440.1 3906105 R 290402 CDS YP_001310441.1 150018187 5294531 complement(3907571..3908227) 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cac:CAC1506 response regulator (CheY-like receiver domain and a HTH); two component transcriptional regulator 3908227 5294531 Cbei_3359 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001310441.1 3907571 R 290402 CDS YP_001310442.1 150018188 5294532 complement(3908615..3909304) 1 NC_009617.1 PFAM: cyclic nucleotide-binding; KEGG: bcz:BCZK3165 possible transcriptional regulator; cyclic nucleotide-binding domain protein; cyclic nucleotide-binding protein 3909304 5294532 Cbei_3360 Clostridium beijerinckii NCIMB 8052 cyclic nucleotide-binding protein YP_001310442.1 3908615 R 290402 CDS YP_001310443.1 150018189 5294533 3909434..3910126 1 NC_009617.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cpr:CPR_0743 HAD superfamily (subfamily IA) hydrolase, TIGR02254; HAD family hydrolase 3910126 5294533 Cbei_3361 Clostridium beijerinckii NCIMB 8052 HAD family hydrolase YP_001310443.1 3909434 D 290402 CDS YP_001310444.1 150018190 5294534 complement(3910378..3910884) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_2017 choline binding protein A; cell wall binding repeat-containing protein 3910884 5294534 Cbei_3362 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001310444.1 3910378 R 290402 CDS YP_001310445.1 150018191 5294535 3911521..3912777 1 NC_009617.1 PFAM: CBS domain containing protein; MgtE intracellular region; PRC-barrel domain protein; KEGG: cno:NT01CX_1389 magnesium transporter; MgtE integral membrane protein 3912777 5294535 Cbei_3363 Clostridium beijerinckii NCIMB 8052 MgtE integral membrane protein YP_001310445.1 3911521 D 290402 CDS YP_001310446.1 150018192 5294536 3912774..3914015 1 NC_009617.1 PFAM: natural resistance-associated macrophage protein; KEGG: cac:CAC3329 Mn transporter NRAMP family; natural resistance-associated macrophage protein 3914015 5294536 Cbei_3364 Clostridium beijerinckii NCIMB 8052 natural resistance-associated macrophage protein YP_001310446.1 3912774 D 290402 CDS YP_001310447.1 150018193 5294537 complement(3914338..3915456) 1 NC_009617.1 PFAM: cell cycle protein; KEGG: cno:NT01CX_1695 rod shape-determining protein RodA; cell cycle protein 3915456 5294537 Cbei_3365 Clostridium beijerinckii NCIMB 8052 cell cycle protein YP_001310447.1 3914338 R 290402 CDS YP_001310448.1 150018194 5294538 complement(3916081..3917118) 1 NC_009617.1 PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: oih:OB2705 transcriptional regulator; LacI family transcriptional regulator 3917118 5294538 Cbei_3366 Clostridium beijerinckii NCIMB 8052 LacI family transcriptional regulator YP_001310448.1 3916081 R 290402 CDS YP_001310449.1 150018195 5294539 complement(3917463..3918716) 1 NC_009617.1 PFAM: sugar-specific permease, SgaT/UlaA; KEGG: gka:GK2016 PTS system, unknown pentitol phosphotransferase enzyme IIC component; sugar-specific permease, SgaT/UlaA 3918716 5294539 Cbei_3367 Clostridium beijerinckii NCIMB 8052 sugar-specific permease, SgaT/UlaA YP_001310449.1 3917463 R 290402 CDS YP_001310450.1 150018196 5294540 3919266..3919595 1 NC_009617.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: vvu:VV2_0912 hypothetical protein; cupin 3919595 5294540 Cbei_3368 Clostridium beijerinckii NCIMB 8052 cupin YP_001310450.1 3919266 D 290402 CDS YP_001310451.1 150018197 5294541 complement(3919883..3920104) 1 NC_009617.1 TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; KEGG: oih:OB0493 hypothetical conserved protein; L-rhamnose 1-epimerase 3920104 5294541 Cbei_3369 Clostridium beijerinckii NCIMB 8052 L-rhamnose 1-epimerase YP_001310451.1 3919883 R 290402 CDS YP_001310452.1 150018198 5294542 complement(3920232..3920867) 1 NC_009617.1 PFAM: Ribose/galactose isomerase; KEGG: cac:CAC2606 hypothetical protein; hypothetical protein 3920867 5294542 Cbei_3370 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310452.1 3920232 R 290402 CDS YP_001310453.1 150018199 5294543 complement(3920883..3921686) 1 NC_009617.1 Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate; gluconate 5-dehydrogenase 3921686 5294543 Cbei_3371 Clostridium beijerinckii NCIMB 8052 gluconate 5-dehydrogenase YP_001310453.1 3920883 R 290402 CDS YP_001310454.1 150018200 5294544 3921877..3922734 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: cac:CAC2608 trancriptional regulator of AraC family; helix-turn-helix domain-containing protein 3922734 5294544 Cbei_3372 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001310454.1 3921877 D 290402 CDS YP_001310455.1 150018201 5294545 3922919..3923848 1 NC_009617.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: psp:PSPPH_2396 prophage PSPPH04, lysozyme; peptidoglycan binding domain-containing protein 3923848 5294545 Cbei_3373 Clostridium beijerinckii NCIMB 8052 peptidoglycan binding domain-containing protein YP_001310455.1 3922919 D 290402 CDS YP_001310456.1 150018202 5294546 complement(3923921..3924604) 1 NC_009617.1 KEGG: dsy:DSY1061 hypothetical protein; hypothetical protein 3924604 5294546 Cbei_3374 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310456.1 3923921 R 290402 CDS YP_001310457.1 150018203 5294547 complement(3925033..3925281) 1 NC_009617.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: cth:Cthe_2100 transcriptional regulator, AbrB family; AbrB family transcriptional regulator 3925281 5294547 Cbei_3375 Clostridium beijerinckii NCIMB 8052 AbrB family transcriptional regulator YP_001310457.1 3925033 R 290402 CDS YP_001310458.1 150018204 5294548 complement(3925451..3926482) 1 NC_009617.1 PFAM: protein of unknown function DUF1646; KEGG: tte:TTE2541 hypothetical protein; hypothetical protein 3926482 5294548 Cbei_3376 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310458.1 3925451 R 290402 CDS YP_001310459.1 150018205 5294549 complement(3926843..3929953) 1 NC_009617.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: cth:Cthe_0511 histidine kinase; PAS/PAC sensor signal transduction histidine kinase 3929953 5294549 Cbei_3377 Clostridium beijerinckii NCIMB 8052 PAS/PAC sensor signal transduction histidine kinase YP_001310459.1 3926843 R 290402 CDS YP_001310460.1 150018206 5294550 complement(3930072..3930422) 1 NC_009617.1 KEGG: cpf:CPF_0994 hypothetical protein; hypothetical protein 3930422 5294550 Cbei_3378 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310460.1 3930072 R 290402 CDS YP_001310461.1 150018207 5294551 complement(3930443..3930937) 1 NC_009617.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: pau:PA14_40700 hypothetical protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein 3930937 5294551 Cbei_3379 Clostridium beijerinckii NCIMB 8052 YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_001310461.1 3930443 R 290402 CDS YP_001310462.1 150018208 5294552 complement(3931265..3931927) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_0345 choline binding protein C; cell wall binding repeat-containing protein 3931927 5294552 Cbei_3380 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001310462.1 3931265 R 290402 CDS YP_001310463.1 150018209 5294553 complement(3932335..3932721) 1 NC_009617.1 KEGG: cpr:CPR_C0052 hypothetical protein; hypothetical protein 3932721 5294553 Cbei_3381 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310463.1 3932335 R 290402 CDS YP_001310464.1 150018210 5294554 complement(3932737..3932970) 1 NC_009617.1 KEGG: cpr:CPR_C0053 hypothetical protein; hypothetical protein 3932970 5294554 Cbei_3382 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310464.1 3932737 R 290402 CDS YP_001310465.1 150018211 5294555 complement(3933223..3934650) 1 NC_009617.1 TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; Ig domain protein, group 2 domain protein; KEGG: cac:CAC3086 protein containing cell adhesion domain; hypothetical protein 3934650 5294555 Cbei_3383 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310465.1 3933223 R 290402 CDS YP_001310466.1 150018212 5294556 complement(3934868..3935041) 1 NC_009617.1 hypothetical protein 3935041 5294556 Cbei_3384 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310466.1 3934868 R 290402 CDS YP_001310467.1 150018213 5294557 complement(3935043..3935327) 1 NC_009617.1 KEGG: cth:Cthe_2496 hypothetical protein; hypothetical protein 3935327 5294557 Cbei_3385 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310467.1 3935043 R 290402 CDS YP_001310468.1 150018214 5294558 complement(3935351..3937162) 1 NC_009617.1 KEGG: mba:Mbar_A0416 hypothetical protein; periplasmic ligand-binding sensor protein 3937162 5294558 Cbei_3386 Clostridium beijerinckii NCIMB 8052 periplasmic ligand-binding sensor protein YP_001310468.1 3935351 R 290402 CDS YP_001310469.1 150018215 5294559 complement(3937175..3937957) 1 NC_009617.1 KEGG: bca:BCE_4654 hypothetical protein; hypothetical protein 3937957 5294559 Cbei_3387 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310469.1 3937175 R 290402 CDS YP_001310470.1 150018216 5294560 complement(3938128..3938781) 1 NC_009617.1 KEGG: cvi:CV0418 probable tail fiber-related protein; tail fiber-like protein 3938781 5294560 Cbei_3388 Clostridium beijerinckii NCIMB 8052 tail fiber-like protein YP_001310470.1 3938128 R 290402 CDS YP_001310471.1 150018217 5294561 complement(3938783..3939487) 1 NC_009617.1 KEGG: ctc:CTC02112 phage-like element pbsx protein XkdT; hypothetical protein 3939487 5294561 Cbei_3389 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310471.1 3938783 R 290402 CDS YP_001310472.1 150018218 5294562 complement(3939480..3940589) 1 NC_009617.1 PFAM: Baseplate J family protein; KEGG: ctc:CTC02115 phage-like element pbsx protein XkdT; baseplate J family protein 3940589 5294562 Cbei_3390 Clostridium beijerinckii NCIMB 8052 baseplate J family protein YP_001310472.1 3939480 R 290402 CDS YP_001310473.1 150018219 5294563 complement(3940579..3941019) 1 NC_009617.1 KEGG: ctc:CTC02116 phage-like element pbsx protein XkdS; hypothetical protein 3941019 5294563 Cbei_3391 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310473.1 3940579 R 290402 CDS YP_001310474.1 150018220 5294564 complement(3941012..3941335) 1 NC_009617.1 hypothetical protein 3941335 5294564 Cbei_3392 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310474.1 3941012 R 290402 CDS YP_001310475.1 150018221 5294565 complement(3941335..3942339) 1 NC_009617.1 KEGG: ctc:CTC02117 phage-like element pbsx protein XkdQ; phage-like element pbsx protein XkdQ 3942339 5294565 Cbei_3393 Clostridium beijerinckii NCIMB 8052 phage-like element pbsx protein XkdQ YP_001310475.1 3941335 R 290402 CDS YP_001310476.1 150018222 5294566 complement(3942336..3942815) 1 NC_009617.1 KEGG: bsu:BG11287 unknown; hypothetical protein 3942815 5294566 Cbei_3394 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310476.1 3942336 R 290402 CDS YP_001310477.1 150018223 5294567 complement(3942829..3945249) 1 NC_009617.1 KEGG: sak:SAK_0756 prophage LambdaSa04, tail tape measure protein, TP901 family; hypothetical protein 3945249 5294567 Cbei_3395 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310477.1 3942829 R 290402 CDS YP_001310478.1 150018224 5294568 complement(3945425..3945829) 1 NC_009617.1 PFAM: Phage XkdN-like protein; KEGG: ctc:CTC02122 hypothetical protein; Phage XkdN-like protein 3945829 5294568 Cbei_3396 Clostridium beijerinckii NCIMB 8052 Phage XkdN-like protein YP_001310478.1 3945425 R 290402 CDS YP_001310479.1 150018225 5294569 complement(3946233..3946664) 1 NC_009617.1 KEGG: ctc:CTC02124 phage-like element pbsx protein XkdM; phage-like element pbsx protein XkdM 3946664 5294569 Cbei_3397 Clostridium beijerinckii NCIMB 8052 phage-like element pbsx protein XkdM YP_001310479.1 3946233 R 290402 CDS YP_001310480.1 150018226 5294570 complement(3946677..3947798) 1 NC_009617.1 KEGG: ctc:CTC02125 phage-like element pbsx protein XkdK; phage-like element pbsx protein XkdK 3947798 5294570 Cbei_3398 Clostridium beijerinckii NCIMB 8052 phage-like element pbsx protein XkdK YP_001310480.1 3946677 R 290402 CDS YP_001310481.1 150018227 5294571 complement(3947811..3948245) 1 NC_009617.1 hypothetical protein 3948245 5294571 Cbei_3399 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310481.1 3947811 R 290402 CDS YP_001310482.1 150018228 5294572 3948737..3949402 1 NC_009617.1 KEGG: ago:AGOS_AFL125W AFL125Wp; hypothetical protein 3949402 5294572 Cbei_3400 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310482.1 3948737 D 290402 CDS YP_001310483.1 150018229 5294573 complement(3949477..3949983) 1 NC_009617.1 hypothetical protein 3949983 5294573 Cbei_3401 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310483.1 3949477 R 290402 CDS YP_001310484.1 150018230 5294574 complement(3950184..3950738) 1 NC_009617.1 in yeast cells this enzyme removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''-cyclic phosphate; functions in tRNA splicing; the function and substrate of bacterial enzymes in organisms that do not perform splicing is unknown; RNA 2'-phosphotransferase-like protein 3950738 5294574 Cbei_3402 Clostridium beijerinckii NCIMB 8052 RNA 2'-phosphotransferase-like protein YP_001310484.1 3950184 R 290402 CDS YP_001310485.1 150018231 5294575 3951312..3953558 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: ana:alr4878 two-component hybrid sensor and regulator; integral membrane sensor hybrid histidine kinase 3953558 5294575 Cbei_3403 Clostridium beijerinckii NCIMB 8052 integral membrane sensor hybrid histidine kinase YP_001310485.1 3951312 D 290402 CDS YP_001310486.1 150018232 5294576 3953559..3954062 1 NC_009617.1 KEGG: tcx:Tcr_2180 PAS/PAC sensor hybrid histidine kinase; response regulator receiver protein 3954062 5294576 Cbei_3404 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001310486.1 3953559 D 290402 CDS YP_001310487.1 150018233 5294577 3954055..3955266 1 NC_009617.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cth:Cthe_0511 histidine kinase; response regulator receiver sensor signal transduction histidine kinase 3955266 5294577 Cbei_3405 Clostridium beijerinckii NCIMB 8052 response regulator receiver sensor signal transduction histidine kinase YP_001310487.1 3954055 D 290402 CDS YP_001310488.1 150018234 5294578 3955843..3956415 1 NC_009617.1 TIGRFAM: RNA polymerase sigma-70; KEGG: cno:NT01CX_1545 sigma-70 region 2 domain protein; RNA polymerase sigma-70 3956415 5294578 Cbei_3406 Clostridium beijerinckii NCIMB 8052 RNA polymerase sigma-70 YP_001310488.1 3955843 D 290402 CDS YP_001310489.1 150018235 5294579 complement(3956663..3958627) 1 NC_009617.1 PFAM: NHL repeat containing protein; cell wall binding repeat-containing protein; KEGG: spd:SPD_0126 pneumococcal surface protein A; cell wall binding repeat-containing protein 3958627 5294579 Cbei_3407 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001310489.1 3956663 R 290402 CDS YP_001310490.1 150018236 5296417 3960295..3960840 1 NC_009617.1 KEGG: ddi:DDBDRAFT_0188052 hypothetical protein; hypothetical protein 3960840 5296417 Cbei_3408 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310490.1 3960295 D 290402 CDS YP_001310491.1 150018237 5294581 3961075..3961323 1 NC_009617.1 hypothetical protein 3961323 5294581 Cbei_3409 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310491.1 3961075 D 290402 CDS YP_001310492.1 150018238 5294582 complement(3961516..3962409) 1 NC_009617.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: cac:CAC0875 predicted permease; hypothetical protein 3962409 5294582 Cbei_3410 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310492.1 3961516 R 290402 CDS YP_001310493.1 150018239 5294583 3962687..3963598 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: bsu:BG12130 similar to transcriptional regulator (AraC/XylS family); helix-turn-helix domain-containing protein 3963598 5294583 Cbei_3411 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001310493.1 3962687 D 290402 CDS YP_001310494.1 150018240 5294584 3963746..3964312 1 NC_009617.1 KEGG: cac:CAC0785 hypothetical protein; hypothetical protein 3964312 5294584 Cbei_3412 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310494.1 3963746 D 290402 CDS YP_001310495.1 150018241 5294585 complement(3964848..3965624) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: csa:Csal_2719 transcriptional regulator, AraC family; AraC family transcriptional regulator 3965624 5294585 Cbei_3413 Clostridium beijerinckii NCIMB 8052 AraC family transcriptional regulator YP_001310495.1 3964848 R 290402 CDS YP_001310496.1 150018242 5294586 complement(3965630..3966226) 1 NC_009617.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: btl:BALH_2175 transporter LysE family; lysine exporter protein LysE/YggA 3966226 5294586 Cbei_3414 Clostridium beijerinckii NCIMB 8052 lysine exporter protein LysE/YggA YP_001310496.1 3965630 R 290402 CDS YP_001310497.1 150018243 5294587 complement(3966396..3966815) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcl:ABC1921 acetyltransferase, GNAT family; N-acetyltransferase GCN5 3966815 5294587 Cbei_3415 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001310497.1 3966396 R 290402 CDS YP_001310498.1 150018244 5294588 complement(3967352..3968095) 1 NC_009617.1 PFAM: Protein of unknown function DUF1963; KEGG: cac:CAC0820 conserved protein, ortholog YwqG B.subtilis; hypothetical protein 3968095 5294588 Cbei_3416 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310498.1 3967352 R 290402 CDS YP_001310499.1 150018245 5294589 complement(3968233..3968532) 1 NC_009617.1 hypothetical protein 3968532 5294589 Cbei_3417 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310499.1 3968233 R 290402 CDS YP_001310500.1 150018246 5294590 complement(3968670..3969233) 1 NC_009617.1 PFAM: nitroreductase; KEGG: chy:CHY_1798 nitroreductase; nitroreductase 3969233 5294590 Cbei_3418 Clostridium beijerinckii NCIMB 8052 nitroreductase YP_001310500.1 3968670 R 290402 CDS YP_001310501.1 150018247 5294591 complement(3969301..3969828) 1 NC_009617.1 KEGG: mla:Mlab_0185 hypothetical protein; hypothetical protein 3969828 5294591 Cbei_3419 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310501.1 3969301 R 290402 CDS YP_001310502.1 150018248 5294592 complement(3970043..3970648) 1 NC_009617.1 PFAM: Protein of unknown function DUF1847; KEGG: mmp:MMP0851 hypothetical protein; hypothetical protein 3970648 5294592 Cbei_3420 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310502.1 3970043 R 290402 CDS YP_001310503.1 150018249 5294593 complement(3971102..3971398) 1 NC_009617.1 KEGG: bld:BLi02197 hypothetical protein; hypothetical protein 3971398 5294593 Cbei_3421 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310503.1 3971102 R 290402 CDS YP_001310504.1 150018250 5294594 complement(3971859..3972911) 1 NC_009617.1 KEGG: cpe:CPE1341 probable galactoside ABC transporter; galactoside ABC transporter 3972911 5294594 Cbei_3422 Clostridium beijerinckii NCIMB 8052 galactoside ABC transporter YP_001310504.1 3971859 R 290402 CDS YP_001310505.1 150018251 5294595 complement(3973248..3974129) 1 NC_009617.1 PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: bcl:ABC3710 transcriptional regulator, LysR family; LysR family transcriptional regulator 3974129 5294595 Cbei_3423 Clostridium beijerinckii NCIMB 8052 LysR family transcriptional regulator YP_001310505.1 3973248 R 290402 CDS YP_001310506.1 150018252 5294596 3974262..3974879 1 NC_009617.1 PFAM: Phosphoglycerate mutase; KEGG: ctc:CTC02637 phosphoglycerate mutase; phosphoglycerate mutase 3974879 5294596 Cbei_3424 Clostridium beijerinckii NCIMB 8052 phosphoglycerate mutase YP_001310506.1 3974262 D 290402 CDS YP_001310507.1 150018253 5294597 complement(3974969..3975178) 1 NC_009617.1 hypothetical protein 3975178 5294597 Cbei_3425 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310507.1 3974969 R 290402 CDS YP_001310508.1 150018254 5294598 complement(3975395..3975787) 1 NC_009617.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: swo:Swol_2168 iron-binding protein, hemerythrin; hemerythrin-like metal-binding protein 3975787 5294598 Cbei_3426 Clostridium beijerinckii NCIMB 8052 hemerythrin-like metal-binding protein YP_001310508.1 3975395 R 290402 CDS YP_001310509.1 150018255 5294599 complement(3975888..3976385) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fnu:FN1294 ribosomal-protein-alanine acetyltransferase; N-acetyltransferase GCN5 3976385 5294599 Cbei_3427 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001310509.1 3975888 R 290402 CDS YP_001310510.1 150018256 5294600 complement(3976425..3976733) 1 NC_009617.1 KEGG: cac:CAC3398 uncharacterized conserved protein, YbhB family; hypothetical protein 3976733 5294600 Cbei_3428 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310510.1 3976425 R 290402 CDS YP_001310511.1 150018257 5294601 complement(3976816..3977181) 1 NC_009617.1 PFAM: helix-turn-helix, HxlR type; KEGG: cac:CAC3399 predicted transcriptional regulator; HxlR family transcriptional regulator 3977181 5294601 Cbei_3429 Clostridium beijerinckii NCIMB 8052 HxlR family transcriptional regulator YP_001310511.1 3976816 R 290402 CDS YP_001310512.1 150018258 5294602 complement(3977213..3977776) 1 NC_009617.1 KEGG: det:DET0571 hypothetical protein; hypothetical protein 3977776 5294602 Cbei_3430 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310512.1 3977213 R 290402 CDS YP_001310513.1 150018259 5296418 complement(3978732..3979448) 1 NC_009617.1 KEGG: ssp:SSP1337 ABC transporter permease; hypothetical protein 3979448 5296418 Cbei_3432 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310513.1 3978732 R 290402 CDS YP_001310514.1 150018260 5294604 complement(3979463..3980293) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: btl:BALH_4326 ABC transporter ATP-binding protein; ABC transporter 3980293 5294604 Cbei_3433 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001310514.1 3979463 R 290402 CDS YP_001310515.1 150018261 5294605 complement(3980799..3981221) 1 NC_009617.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: cth:Cthe_1582 cytidine deaminase; cytidine deaminase 3981221 5294605 Cbei_3434 Clostridium beijerinckii NCIMB 8052 cytidine deaminase YP_001310515.1 3980799 R 290402 CDS YP_001310516.1 150018262 5294606 complement(3981655..3982578) 1 NC_009617.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: dsy:DSY1618 hypothetical protein; hypothetical protein 3982578 5294606 Cbei_3435 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310516.1 3981655 R 290402 CDS YP_001310517.1 150018263 5294607 complement(3982571..3983410) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: dsy:DSY1619 hypothetical protein; AraC family transcriptional regulator 3983410 5294607 Cbei_3436 Clostridium beijerinckii NCIMB 8052 AraC family transcriptional regulator YP_001310517.1 3982571 R 290402 CDS YP_001310518.1 150018264 5294608 complement(3984061..3984450) 1 NC_009617.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bat:BAS3152 glyoxylase family protein; glyoxalase/bleomycin resistance protein/dioxygenase 3984450 5294608 Cbei_3437 Clostridium beijerinckii NCIMB 8052 glyoxalase/bleomycin resistance protein/dioxygenase YP_001310518.1 3984061 R 290402 CDS YP_001310519.1 150018265 5294609 complement(3984513..3985127) 1 NC_009617.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: cac:CAC2692 O-acetyltransferase, from isoleucine patch superfamily; maltose O-acetyltransferase 3985127 5294609 Cbei_3438 Clostridium beijerinckii NCIMB 8052 maltose O-acetyltransferase YP_001310519.1 3984513 R 290402 CDS YP_001310520.1 150018266 5294610 complement(3985208..3986455) 1 NC_009617.1 PFAM: major facilitator superfamily MFS_1; KEGG: deh:cbdb_A1621 major facilitator family transporter; major facilitator superfamily transporter 3986455 5294610 Cbei_3439 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001310520.1 3985208 R 290402 CDS YP_001310521.1 150018267 5294611 3986725..3987618 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; Cupin 2, conserved barrel domain protein; KEGG: bad:BAD_1048 hypothetical protein; helix-turn-helix domain-containing protein 3987618 5294611 Cbei_3440 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001310521.1 3986725 D 290402 CDS YP_001310522.1 150018268 5294612 complement(3988035..3989492) 1 NC_009617.1 KEGG: tte:TTE2242 transposase; transposase 3989492 5294612 Cbei_3441 Clostridium beijerinckii NCIMB 8052 transposase YP_001310522.1 3988035 R 290402 CDS YP_001310523.1 150018269 5294613 3989663..3990373 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: bha:BH1786 transcriptional regulator (AraC/XylS family); helix-turn-helix domain-containing protein 3990373 5294613 Cbei_3442 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001310523.1 3989663 D 290402 CDS YP_001310524.1 150018270 5294614 3990469..3991314 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mmp:MMP0438 hypothetical protein; 4Fe-4S ferredoxin 3991314 5294614 Cbei_3443 Clostridium beijerinckii NCIMB 8052 4Fe-4S ferredoxin YP_001310524.1 3990469 D 290402 CDS YP_001310525.1 150018271 5294615 3991549..3991866 1 NC_009617.1 hypothetical protein 3991866 5294615 Cbei_3444 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310525.1 3991549 D 290402 CDS YP_001310526.1 150018272 5294616 complement(3991992..3992312) 1 NC_009617.1 PFAM: small multidrug resistance protein; KEGG: rpb:RPB_3160 small multidrug resistance protein; small multidrug resistance protein 3992312 5294616 Cbei_3445 Clostridium beijerinckii NCIMB 8052 small multidrug resistance protein YP_001310526.1 3991992 R 290402 CDS YP_001310527.1 150018273 5294617 complement(3992441..3993130) 1 NC_009617.1 PFAM: Radical SAM domain protein; KEGG: cpf:CPF_1039 radical SAM domain protein; radical SAM domain-containing protein 3993130 5294617 Cbei_3446 Clostridium beijerinckii NCIMB 8052 radical SAM domain-containing protein YP_001310527.1 3992441 R 290402 CDS YP_001310528.1 150018274 5294618 complement(3993150..3993755) 1 NC_009617.1 KEGG: cac:CA_P0113 solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta; Solo B3/4 domain-containing protein 3993755 5294618 Cbei_3447 Clostridium beijerinckii NCIMB 8052 Solo B3/4 domain-containing protein YP_001310528.1 3993150 R 290402 CDS YP_001310529.1 150018275 5294619 complement(3994127..3995371) 1 NC_009617.1 KEGG: rno:684690 hypothetical protein LOC684690; hypothetical protein 3995371 5294619 Cbei_3448 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310529.1 3994127 R 290402 CDS YP_001310530.1 150018276 5294620 complement(3996118..3996576) 1 NC_009617.1 PFAM: NUDIX hydrolase; KEGG: fra:Francci3_0900 NUDIX hydrolase; NUDIX hydrolase 3996576 5294620 Cbei_3449 Clostridium beijerinckii NCIMB 8052 NUDIX hydrolase YP_001310530.1 3996118 R 290402 CDS YP_001310531.1 150018277 5294621 3996771..3997307 1 NC_009617.1 KEGG: bha:BH2521 transposase (21); transposase (21) 3997307 5294621 Cbei_3450 Clostridium beijerinckii NCIMB 8052 transposase (21) YP_001310531.1 3996771 D 290402 CDS YP_001310532.1 150018278 5294622 3997327..3997833 1 NC_009617.1 KEGG: bha:BH2520 transposase related protein (20); transposase-like protein (20) 3997833 5294622 Cbei_3451 Clostridium beijerinckii NCIMB 8052 transposase-like protein (20) YP_001310532.1 3997327 D 290402 CDS YP_001310533.1 150018279 5294623 complement(3997997..3998398) 1 NC_009617.1 hypothetical protein 3998398 5294623 Cbei_3452 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310533.1 3997997 R 290402 CDS YP_001310534.1 150018280 5294624 complement(3999601..4000473) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; transcription activator, effector binding; KEGG: dsy:DSY2786 hypothetical protein; transcription activator, effector binding 4000473 5294624 Cbei_3453 Clostridium beijerinckii NCIMB 8052 transcription activator, effector binding YP_001310534.1 3999601 R 290402 CDS YP_001310535.1 150018281 5294625 complement(4000491..4001600) 1 NC_009617.1 PFAM: peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: dsy:DSY2787 hypothetical protein; peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 4001600 5294625 Cbei_3454 Clostridium beijerinckii NCIMB 8052 peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase YP_001310535.1 4000491 R 290402 CDS YP_001310536.1 150018282 5294626 complement(4001698..4002861) 1 NC_009617.1 PFAM: regulatory protein, MerR; KEGG: cno:NT01CX_0956 HTH-type transcriptional activator TipA; MerR family transcriptional regulator 4002861 5294626 Cbei_3455 Clostridium beijerinckii NCIMB 8052 MerR family transcriptional regulator YP_001310536.1 4001698 R 290402 CDS YP_001310537.1 150018283 5294627 complement(4003101..4003307) 1 NC_009617.1 PFAM: helix-turn-helix domain protein; KEGG: cpe:CPE0258 probable transcriptional regulator; XRE family transcriptional regulator 4003307 5294627 Cbei_3456 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001310537.1 4003101 R 290402 CDS YP_001310538.1 150018284 5294628 complement(4003332..4003778) 1 NC_009617.1 hypothetical protein 4003778 5294628 Cbei_3457 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310538.1 4003332 R 290402 CDS YP_001310539.1 150018285 5294629 complement(4004086..4004718) 1 NC_009617.1 KEGG: cac:CAC0777 acetyltransferase (the isoleucine patch superfamily); acetyltransferase 4004718 5294629 Cbei_3458 Clostridium beijerinckii NCIMB 8052 acetyltransferase YP_001310539.1 4004086 R 290402 CDS YP_001310540.1 150018286 5294630 complement(4005458..4006288) 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: gme:Gmet_0807 4Fe-4S ferredoxin, iron-sulfur binding protein; 4Fe-4S ferredoxin 4006288 5294630 Cbei_3459 Clostridium beijerinckii NCIMB 8052 4Fe-4S ferredoxin YP_001310540.1 4005458 R 290402 CDS YP_001310541.1 150018287 5294631 complement(4006345..4007091) 1 NC_009617.1 PFAM: SMC domain protein; SMART: ATPase AAA; KEGG: rme:Rmet_4896 SMC protein-like protein; SMC domain-containing protein 4007091 5294631 Cbei_3460 Clostridium beijerinckii NCIMB 8052 SMC domain-containing protein YP_001310541.1 4006345 R 290402 CDS YP_001310542.1 150018288 5294632 complement(4007144..4007575) 1 NC_009617.1 hypothetical protein 4007575 5294632 Cbei_3461 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310542.1 4007144 R 290402 CDS YP_001310543.1 150018289 5294633 complement(4007935..4008753) 1 NC_009617.1 PFAM: Abortive infection protein; KEGG: pai:PAE1905 P.aerophilum family 322 protein part 2, authentic frameshift; abortive infection protein 4008753 5294633 Cbei_3462 Clostridium beijerinckii NCIMB 8052 abortive infection protein YP_001310543.1 4007935 R 290402 CDS YP_001310544.1 150018290 5294634 complement(4008971..4009543) 1 NC_009617.1 PFAM: Tellurite resistance protein TehB; Methyltransferase type 12; KEGG: cno:NT01CX_2005 hypothetical protein; type 12 methyltransferase 4009543 5294634 Cbei_3463 Clostridium beijerinckii NCIMB 8052 type 12 methyltransferase YP_001310544.1 4008971 R 290402 CDS YP_001310545.1 150018291 5294635 complement(4009961..4011121) 1 NC_009617.1 KEGG: btl:BALH_2706 glycosyl transferase, group 2 family protein; hypothetical protein 4011121 5294635 Cbei_3464 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310545.1 4009961 R 290402 CDS YP_001310546.1 150018292 5294636 complement(4011445..4011993) 1 NC_009617.1 KEGG: bcz:BCZK1755 hypothetical protein; hypothetical protein 4011993 5294636 Cbei_3465 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310546.1 4011445 R 290402 CDS YP_001310547.1 150018293 5294637 4012194..4013051 1 NC_009617.1 PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: bsu:BG14032 similar to transcriptional regulator (LysR family); LysR family transcriptional regulator 4013051 5294637 Cbei_3466 Clostridium beijerinckii NCIMB 8052 LysR family transcriptional regulator YP_001310547.1 4012194 D 290402 CDS YP_001310548.1 150018294 5294638 complement(4013357..4014103) 1 NC_009617.1 PFAM: regulatory protein, MerR; KEGG: dsy:DSY3460 hypothetical protein; MerR family transcriptional regulator 4014103 5294638 Cbei_3467 Clostridium beijerinckii NCIMB 8052 MerR family transcriptional regulator YP_001310548.1 4013357 R 290402 CDS YP_001310549.1 150018295 5294639 complement(4014404..4014871) 1 NC_009617.1 KEGG: cac:CAC3664 predicted flavodoxin; flavodoxin 4014871 5294639 Cbei_3468 Clostridium beijerinckii NCIMB 8052 flavodoxin YP_001310549.1 4014404 R 290402 CDS YP_001310550.1 150018296 5294640 complement(4014936..4015994) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: hch:HCH_00674 signal transduction histidine kinase; histidine kinase 4015994 5294640 Cbei_3469 Clostridium beijerinckii NCIMB 8052 histidine kinase YP_001310550.1 4014936 R 290402 CDS YP_001310551.1 150018297 5294641 complement(4015999..4017138) 1 NC_009617.1 PFAM: domain of unknown function DUF1745; KEGG: sde:Sde_1899 hypothetical protein; hypothetical protein 4017138 5294641 Cbei_3470 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310551.1 4015999 R 290402 CDS YP_001310552.1 150018298 5294642 complement(4017187..4018383) 1 NC_009617.1 PFAM: response regulator receiver; Metal-dependent hydrolase HDOD; KEGG: mag:amb2955 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; signal transduction protein 4018383 5294642 Cbei_3471 Clostridium beijerinckii NCIMB 8052 signal transduction protein YP_001310552.1 4017187 R 290402 CDS YP_001310553.1 150018299 5294643 complement(4018805..4020070) 1 NC_009617.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; FAD-binding 8 domain protein; Ferric reductase domain protein transmembrane component, N-terminal domain; KEGG: cac:CA_P0043 membrane flavodoxin oxidoreductase; oxidoreductase FAD/NAD(P)-binding subunit 4020070 5294643 Cbei_3472 Clostridium beijerinckii NCIMB 8052 oxidoreductase FAD/NAD(P)-binding subunit YP_001310553.1 4018805 R 290402 CDS YP_001310554.1 150018300 5294644 complement(4020100..4020672) 1 NC_009617.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mst:Msp_1513 hypothetical membrane-spanning protein; CDP-alcohol phosphatidyltransferase 4020672 5294644 Cbei_3473 Clostridium beijerinckii NCIMB 8052 CDP-alcohol phosphatidyltransferase YP_001310554.1 4020100 R 290402 CDS YP_001310555.1 150018301 5294645 complement(4020929..4021708) 1 NC_009617.1 PFAM: polysaccharide deacetylase; KEGG: cno:NT01CX_1505 predicted xylanase/chitin deacetylase; polysaccharide deacetylase 4021708 5294645 Cbei_3474 Clostridium beijerinckii NCIMB 8052 polysaccharide deacetylase YP_001310555.1 4020929 R 290402 CDS YP_001310556.1 150018302 5294646 complement(4022038..4023000) 1 NC_009617.1 PFAM: Ketopantoate reductase ApbA/PanE, N-terminal domain protein; KEGG: smu:SMU.296 hypothetical protein; ketopantoate reductase ApbA/PanE 4023000 5294646 Cbei_3475 Clostridium beijerinckii NCIMB 8052 ketopantoate reductase ApbA/PanE YP_001310556.1 4022038 R 290402 CDS YP_001310557.1 150018303 5296419 complement(4023388..4023732) 1 NC_009617.1 KEGG: ctc:CTC01436 hypothetical protein; hypothetical protein 4023732 5296419 Cbei_3477 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310557.1 4023388 R 290402 CDS YP_001310558.1 150018304 5294648 complement(4024048..4024503) 1 NC_009617.1 hypothetical protein 4024503 5294648 Cbei_3478 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310558.1 4024048 R 290402 CDS YP_001310559.1 150018305 5294649 complement(4024496..4024702) 1 NC_009617.1 PFAM: helix-turn-helix domain protein; KEGG: dsy:DSY1381 hypothetical protein; XRE family transcriptional regulator 4024702 5294649 Cbei_3479 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001310559.1 4024496 R 290402 CDS YP_001310560.1 150018306 5294650 complement(4025107..4025556) 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: cac:CAC3418 transcriptional regulator, MarR/EmrR family; MarR family transcriptional regulator 4025556 5294650 Cbei_3480 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001310560.1 4025107 R 290402 CDS YP_001310561.1 150018307 5294651 complement(4025581..4026210) 1 NC_009617.1 PFAM: UbiE/COQ5 methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: cac:CAC3419 S-adenosylmethionine-dependent methyltransferase; type 11 methyltransferase 4026210 5294651 Cbei_3481 Clostridium beijerinckii NCIMB 8052 type 11 methyltransferase YP_001310561.1 4025581 R 290402 CDS YP_001310562.1 150018308 5294652 complement(4026662..4027114) 1 NC_009617.1 TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; KEGG: cac:CAC2474 N-formylmethionyl-tRNA deformylase; peptide deformylase 4027114 5294652 Cbei_3482 Clostridium beijerinckii NCIMB 8052 peptide deformylase YP_001310562.1 4026662 R 290402 CDS YP_001310563.1 150018309 5294653 complement(4027115..4027351) 1 NC_009617.1 PFAM: helix-turn-helix domain protein; KEGG: cac:CAC2473 predicted transcriptional regulator; XRE family transcriptional regulator 4027351 5294653 Cbei_3483 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001310563.1 4027115 R 290402 CDS YP_001310564.1 150018310 5294654 complement(4027509..4028060) 1 NC_009617.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: cac:CAC3495 multimeric flavodoxin WrbA family protein; NADPH-dependent FMN reductase 4028060 5294654 Cbei_3484 Clostridium beijerinckii NCIMB 8052 NADPH-dependent FMN reductase YP_001310564.1 4027509 R 290402 CDS YP_001310565.1 150018311 5294655 4028209..4028529 1 NC_009617.1 PFAM: helix-turn-helix, HxlR type; KEGG: cac:CAC3496 predicted transcriptional regulator; HxlR family transcriptional regulator 4028529 5294655 Cbei_3485 Clostridium beijerinckii NCIMB 8052 HxlR family transcriptional regulator YP_001310565.1 4028209 D 290402 CDS YP_001310566.1 150018312 5294656 complement(4028772..4029593) 1 NC_009617.1 PFAM: chemotaxis sensory transducer; KEGG: cac:CAC0741 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4029593 5294656 Cbei_3486 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001310566.1 4028772 R 290402 CDS YP_001310567.1 150018313 5296420 complement(4030613..4031161) 1 NC_009617.1 KEGG: cpf:CPF_0995 hypothetical protein; hypothetical protein 4031161 5296420 Cbei_3488 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310567.1 4030613 R 290402 CDS YP_001310568.1 150018314 5294658 complement(4031343..4031849) 1 NC_009617.1 hypothetical protein 4031849 5294658 Cbei_3489 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310568.1 4031343 R 290402 CDS YP_001310569.1 150018315 5294659 complement(4031937..4032242) 1 NC_009617.1 hypothetical protein 4032242 5294659 Cbei_3490 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310569.1 4031937 R 290402 CDS YP_001310570.1 150018316 5294660 complement(4032397..4033191) 1 NC_009617.1 PFAM: protein of unknown function DUF692; KEGG: cac:CAC2465 hypothetical protein; hypothetical protein 4033191 5294660 Cbei_3491 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310570.1 4032397 R 290402 CDS YP_001310571.1 150018317 5294661 complement(4033490..4034749) 1 NC_009617.1 PFAM: major facilitator superfamily MFS_1; KEGG: bce:BC2673 tetracycline resistance determinant TetV; major facilitator superfamily transporter 4034749 5294661 Cbei_3492 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001310571.1 4033490 R 290402 CDS YP_001310572.1 150018318 5294662 complement(4034883..4036100) 1 NC_009617.1 SMART: regulatory protein, MerR; KEGG: btk:BT9727_2442 possible transcriptional regulator, MerR family; MerR family transcriptional regulator 4036100 5294662 Cbei_3493 Clostridium beijerinckii NCIMB 8052 MerR family transcriptional regulator YP_001310572.1 4034883 R 290402 CDS YP_001310573.1 150018319 5294663 complement(4036329..4037240) 1 NC_009617.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: cac:CAC3446 predicted epimerase, PhzC/PhzF homolog; hypothetical protein 4037240 5294663 Cbei_3494 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310573.1 4036329 R 290402 CDS YP_001310574.1 150018320 5294664 complement(4037413..4038135) 1 NC_009617.1 PFAM: beta-lactamase domain protein; KEGG: ctc:CTC01895 metal dependent hydrolase; beta-lactamase domain-containing protein 4038135 5294664 Cbei_3495 Clostridium beijerinckii NCIMB 8052 beta-lactamase domain-containing protein YP_001310574.1 4037413 R 290402 CDS YP_001310575.1 150018321 5294665 4038558..4039871 1 NC_009617.1 PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: cpe:CPE0406 probable reticuline oxidase; FAD linked oxidase domain-containing protein 4039871 5294665 Cbei_3496 Clostridium beijerinckii NCIMB 8052 FAD linked oxidase domain-containing protein YP_001310575.1 4038558 D 290402 CDS YP_001310576.1 150018322 5294666 complement(4040005..4040871) 1 NC_009617.1 PFAM: ROK family protein; KEGG: cac:CAC1523 fructokinase; ROK family protein 4040871 5294666 Cbei_3497 Clostridium beijerinckii NCIMB 8052 ROK family protein YP_001310576.1 4040005 R 290402 CDS YP_001310577.1 150018323 5294667 complement(4040936..4042048) 1 NC_009617.1 KEGG: bad:BAD_1588 hypothetical protein; hypothetical protein 4042048 5294667 Cbei_3498 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310577.1 4040936 R 290402 CDS YP_001310578.1 150018324 5294668 complement(4042074..4042913) 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_0589 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4042913 5294668 Cbei_3499 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001310578.1 4042074 R 290402 CDS YP_001310579.1 150018325 5294669 complement(4042925..4043803) 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_3068 ABC transporter permease, MalFG family; binding-protein-dependent transport system inner membrane protein 4043803 5294669 Cbei_3500 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001310579.1 4042925 R 290402 CDS YP_001310580.1 150018326 5294670 complement(4043984..4045240) 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 1; KEGG: pfu:PF1739 trehalose/maltose binding protein; extracellular solute-binding protein 4045240 5294670 Cbei_3501 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001310580.1 4043984 R 290402 CDS YP_001310581.1 150018327 5294671 4045454..4047274 1 NC_009617.1 PFAM: histidine kinase internal region; KEGG: ctc:CTC01848 two-component sensor kinase YesM; histidine kinase internal region 4047274 5294671 Cbei_3502 Clostridium beijerinckii NCIMB 8052 histidine kinase internal region YP_001310581.1 4045454 D 290402 CDS YP_001310582.1 150018328 5294672 4047300..4048895 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: cpf:CPF_1111 transcriptional regulator, AraC family; response regulator receiver protein 4048895 5294672 Cbei_3503 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001310582.1 4047300 D 290402 CDS YP_001310583.1 150018329 5294673 4049278..4049736 1 NC_009617.1 PFAM: LytTr DNA-binding region; KEGG: lmf:LMOf2365_1005 hypothetical protein; response regulator receiver protein 4049736 5294673 Cbei_3504 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001310583.1 4049278 D 290402 CDS YP_001310584.1 150018330 5294674 4050283..4050798 1 NC_009617.1 KEGG: lme:LEUM_0980 hypothetical protein; hypothetical protein 4050798 5294674 Cbei_3505 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310584.1 4050283 D 290402 CDS YP_001310585.1 150018331 5294675 complement(4051061..4051999) 1 NC_009617.1 PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: tte:TTE0987 transcriptional regulator; LysR family transcriptional regulator 4051999 5294675 Cbei_3506 Clostridium beijerinckii NCIMB 8052 LysR family transcriptional regulator YP_001310585.1 4051061 R 290402 CDS YP_001310586.1 150018332 5294676 4052087..4053202 1 NC_009617.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: pol:Bpro_3220 phosphonoacetate hydrolase; type I phosphodiesterase/nucleotide pyrophosphatase 4053202 5294676 Cbei_3507 Clostridium beijerinckii NCIMB 8052 type I phosphodiesterase/nucleotide pyrophosphatase YP_001310586.1 4052087 D 290402 CDS YP_001310587.1 150018333 5294677 4053274..4054236 1 NC_009617.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: afu:AF0813 phosphoglycerate dehydrogenase (SerA); D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 4054236 5294677 Cbei_3508 Clostridium beijerinckii NCIMB 8052 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit YP_001310587.1 4053274 D 290402 CDS YP_001310588.1 150018334 5294678 complement(4054332..4055204) 1 NC_009617.1 PFAM: Radical SAM domain protein; KEGG: cac:CAC3492 hypothetical protein; radical SAM domain-containing protein 4055204 5294678 Cbei_3509 Clostridium beijerinckii NCIMB 8052 radical SAM domain-containing protein YP_001310588.1 4054332 R 290402 CDS YP_001310589.1 150018335 5294679 complement(4055263..4055796) 1 NC_009617.1 PFAM: protein of unknown function DUF1234; KEGG: sme:SMc00505 hypothetical protein; hypothetical protein 4055796 5294679 Cbei_3510 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310589.1 4055263 R 290402 CDS YP_001310590.1 150018336 5294680 complement(4055978..4056388) 1 NC_009617.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 4056388 5294680 Cbei_3511 Clostridium beijerinckii NCIMB 8052 peptide deformylase YP_001310590.1 4055978 R 290402 CDS YP_001310591.1 150018337 5294681 complement(4056725..4057594) 1 NC_009617.1 PFAM: aldo/keto reductase; KEGG: cac:CAC1958 predicted aldo/keto reductase, YTBE/YVGN B.subtilis ortholog; 2,5-didehydrogluconate reductase 4057594 5294681 Cbei_3512 Clostridium beijerinckii NCIMB 8052 2,5-didehydrogluconate reductase YP_001310591.1 4056725 R 290402 CDS YP_001310592.1 150018338 5294682 complement(4057667..4058011) 1 NC_009617.1 PFAM: ArsR family transcriptional regulator; KEGG: bca:BCE_4519 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 4058011 5294682 Cbei_3513 Clostridium beijerinckii NCIMB 8052 ArsR family transcriptional regulator YP_001310592.1 4057667 R 290402 CDS YP_001310593.1 150018339 5294683 4058736..4059494 1 NC_009617.1 KEGG: swo:Swol_2470 hypothetical protein; hypothetical protein 4059494 5294683 Cbei_3514 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310593.1 4058736 D 290402 CDS YP_001310594.1 150018340 5294684 complement(4059746..4060387) 1 NC_009617.1 KEGG: dsy:DSY1145 hypothetical protein; chloramphenicol O-acetyltransferase 4060387 5294684 Cbei_3515 Clostridium beijerinckii NCIMB 8052 chloramphenicol O-acetyltransferase YP_001310594.1 4059746 R 290402 CDS YP_001310595.1 150018341 5294685 complement(4060539..4063142) 1 NC_009617.1 PFAM: pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising protein, mobile region; KEGG: cac:CAC0534 phosphoenolpyruvate synthase (gene pps); phosphoenolpyruvate synthase 4063142 5294685 Cbei_3516 Clostridium beijerinckii NCIMB 8052 phosphoenolpyruvate synthase YP_001310595.1 4060539 R 290402 CDS YP_001310596.1 150018342 5294686 complement(4063760..4064653) 1 NC_009617.1 PFAM: ROK family protein; KEGG: bha:BH0797 glucose kinase; ROK family protein 4064653 5294686 Cbei_3517 Clostridium beijerinckii NCIMB 8052 ROK family protein YP_001310596.1 4063760 R 290402 CDS YP_001310597.1 150018343 5294687 complement(4065119..4066135) 1 NC_009617.1 PFAM: Aldose 1-epimerase; KEGG: cac:CAC0697 galactose mutarotase related enzyme; aldose 1-epimerase 4066135 5294687 Cbei_3518 Clostridium beijerinckii NCIMB 8052 aldose 1-epimerase YP_001310597.1 4065119 R 290402 CDS YP_001310598.1 150018344 5294688 complement(4066159..4068303) 1 NC_009617.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: tte:TTE2591 N-methylhydaintoinase A; hydantoinase/oxoprolinase 4068303 5294688 Cbei_3519 Clostridium beijerinckii NCIMB 8052 hydantoinase/oxoprolinase YP_001310598.1 4066159 R 290402 CDS YP_001310599.1 150018345 5294689 complement(4068630..4069496) 1 NC_009617.1 PFAM: helix-turn-helix protein RpiR; KEGG: ppe:PEPE_0151 transcriptional regulator; RpiR family transcriptional regulator 4069496 5294689 Cbei_3520 Clostridium beijerinckii NCIMB 8052 RpiR family transcriptional regulator YP_001310599.1 4068630 R 290402 CDS YP_001310600.1 150018346 5294690 complement(4069663..4070334) 1 NC_009617.1 KEGG: tte:TTE2590 hypothetical protein; hypothetical protein 4070334 5294690 Cbei_3521 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310600.1 4069663 R 290402 CDS YP_001310601.1 150018347 5294691 complement(4070401..4071693) 1 NC_009617.1 PFAM: C4-dicarboxylate anaerobic carrier; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: tte:TTE2594 transporter protein; citrate transporter 4071693 5294691 Cbei_3522 Clostridium beijerinckii NCIMB 8052 citrate transporter YP_001310601.1 4070401 R 290402 CDS YP_001310602.1 150018348 5294692 complement(4071755..4073104) 1 NC_009617.1 KEGG: tte:TTE2589 hypothetical protein; hypothetical protein 4073104 5294692 Cbei_3523 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310602.1 4071755 R 290402 CDS YP_001310603.1 150018349 5294693 complement(4073299..4075335) 1 NC_009617.1 PFAM: chemotaxis sensory transducer; KEGG: tte:TTE2231 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4075335 5294693 Cbei_3524 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001310603.1 4073299 R 290402 CDS YP_001310604.1 150018350 5296421 complement(4076335..4077159) 1 NC_009617.1 PFAM: nitroreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cac:CAC2933 ferredoxin-like domain fused to nitroreductase-like domain; 4Fe-4S ferredoxin 4077159 5296421 Cbei_3526 Clostridium beijerinckii NCIMB 8052 4Fe-4S ferredoxin YP_001310604.1 4076335 R 290402 CDS YP_001310605.1 150018351 5294695 4077683..4078480 1 NC_009617.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: reh:H16_B1990 oxidoreductase; short chain dehydrogenase 4078480 5294695 Cbei_3527 Clostridium beijerinckii NCIMB 8052 short chain dehydrogenase YP_001310605.1 4077683 D 290402 CDS YP_001310606.1 150018352 5294696 4078672..4078959 1 NC_009617.1 PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: mmp:MMP0887 hypothetical protein; stress responsive alpha-beta barrel domain-containing protein 4078959 5294696 Cbei_3528 Clostridium beijerinckii NCIMB 8052 stress responsive alpha-beta barrel domain-containing protein YP_001310606.1 4078672 D 290402 CDS YP_001310607.1 150018353 5294697 complement(4079338..4079841) 1 NC_009617.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: cac:CAC3525 uncharacterized conserved protein, YjeB/RRF2 family; BadM/Rrf2 family transcriptional regulator 4079841 5294697 Cbei_3529 Clostridium beijerinckii NCIMB 8052 BadM/Rrf2 family transcriptional regulator YP_001310607.1 4079338 R 290402 CDS YP_001310608.1 150018354 5294698 4080046..4080417 1 NC_009617.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: cac:CAC3526 FMN-binding protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 4080417 5294698 Cbei_3530 Clostridium beijerinckii NCIMB 8052 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001310608.1 4080046 D 290402 CDS YP_001310609.1 150018355 5294699 4080442..4080618 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cac:CAC3527 ferredoxin; 4Fe-4S ferredoxin 4080618 5294699 Cbei_3531 Clostridium beijerinckii NCIMB 8052 4Fe-4S ferredoxin YP_001310609.1 4080442 D 290402 CDS YP_001310610.1 150018356 5294700 complement(4080819..4081835) 1 NC_009617.1 catalyzes the reduction of alpha, beta-unsaturated aldehydes and ketones; reduces the nitro group nitroester and nitroaromatic compounds; NADPH dehydrogenase NamA 4081835 5294700 Cbei_3532 Clostridium beijerinckii NCIMB 8052 NADPH dehydrogenase NamA YP_001310610.1 4080819 R 290402 CDS YP_001310611.1 150018357 5294701 4081981..4082316 1 NC_009617.1 PFAM: helix-turn-helix, HxlR type; KEGG: bce:BC0856 transcriptional regulator, MarR family; HxlR family transcriptional regulator 4082316 5294701 Cbei_3533 Clostridium beijerinckii NCIMB 8052 HxlR family transcriptional regulator YP_001310611.1 4081981 D 290402 CDS YP_001310612.1 150018358 5294702 4082658..4083419 1 NC_009617.1 PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: cpr:CPR_0708 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 4083419 5294702 Cbei_3534 Clostridium beijerinckii NCIMB 8052 DeoR family transcriptional regulator YP_001310612.1 4082658 D 290402 CDS YP_001310613.1 150018359 5294703 complement(4083789..4084421) 1 NC_009617.1 PFAM: protein of unknown function DUF1648; KEGG: mla:Mlab_0304 hypothetical protein; hypothetical protein 4084421 5294703 Cbei_3535 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310613.1 4083789 R 290402 CDS YP_001310614.1 150018360 5294704 complement(4084408..4084686) 1 NC_009617.1 PFAM: ArsR family transcriptional regulator; Helix-turn-helix, type 11 domain protein; KEGG: mla:Mlab_0303 hypothetical protein; ArsR family transcriptional regulator 4084686 5294704 Cbei_3536 Clostridium beijerinckii NCIMB 8052 ArsR family transcriptional regulator YP_001310614.1 4084408 R 290402 CDS YP_001310615.1 150018361 5294705 complement(4084846..4085907) 1 NC_009617.1 KEGG: ctc:CTC01816 hypothetical protein; hypothetical protein 4085907 5294705 Cbei_3537 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310615.1 4084846 R 290402 CDS YP_001310616.1 150018362 5294706 complement(4085897..4086463) 1 NC_009617.1 TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4 type 2; KEGG: ctc:CTC01788 RNA polymerase sigma-70 factor; ECF subfamily RNA polymerase sigma-24 factor 4086463 5294706 Cbei_3538 Clostridium beijerinckii NCIMB 8052 ECF subfamily RNA polymerase sigma-24 factor YP_001310616.1 4085897 R 290402 CDS YP_001310617.1 150018363 5294707 complement(4086774..4087385) 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CAC1476 proline/glycine betaine ABC-type transport system, permease component; glycine/betaine ABC transporter permease 4087385 5294707 Cbei_3539 Clostridium beijerinckii NCIMB 8052 glycine/betaine ABC transporter permease YP_001310617.1 4086774 R 290402 CDS YP_001310618.1 150018364 5294708 complement(4087572..4088315) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC1475 proline/glycine betaine ABC transport system, ATPase component; glycine/betaine ABC transporter ATPase 4088315 5294708 Cbei_3540 Clostridium beijerinckii NCIMB 8052 glycine/betaine ABC transporter ATPase YP_001310618.1 4087572 R 290402 CDS YP_001310619.1 150018365 5294709 complement(4088338..4089240) 1 NC_009617.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: cac:CAC1474 proline/glycine betaine ABC transport system, periplasmic component; glycine/betaine ABC transporter substrate-binding protein 4089240 5294709 Cbei_3541 Clostridium beijerinckii NCIMB 8052 glycine/betaine ABC transporter substrate-binding protein YP_001310619.1 4088338 R 290402 CDS YP_001310620.1 150018366 5294710 complement(4089359..4090009) 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CAC1473 proline/glycine betaine ABC-type transport system, permease component; glycine/betaine ABC transporter 4090009 5294710 Cbei_3542 Clostridium beijerinckii NCIMB 8052 glycine/betaine ABC transporter YP_001310620.1 4089359 R 290402 CDS YP_001310621.1 150018367 5294711 complement(4090401..4091705) 1 NC_009617.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: cth:Cthe_1842 O-acetylhomoserine/O-acetylserine sulfhydrylase; O-acetylhomoserine aminocarboxypropyltransferase 4091705 5294711 Cbei_3543 Clostridium beijerinckii NCIMB 8052 O-acetylhomoserine aminocarboxypropyltransferase YP_001310621.1 4090401 R 290402 CDS YP_001310622.1 150018368 5294712 complement(4091870..4092778) 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: gme:Gmet_2239 4Fe-4S ferredoxin, iron-sulfur binding protein; 4Fe-4S ferredoxin 4092778 5294712 Cbei_3544 Clostridium beijerinckii NCIMB 8052 4Fe-4S ferredoxin YP_001310622.1 4091870 R 290402 CDS YP_001310623.1 150018369 5294713 4093294..4094217 1 NC_009617.1 PFAM: aminoglycoside phosphotransferase; KEGG: dsy:DSY3609 hypothetical protein; aminoglycoside phosphotransferase 4094217 5294713 Cbei_3545 Clostridium beijerinckii NCIMB 8052 aminoglycoside phosphotransferase YP_001310623.1 4093294 D 290402 CDS YP_001310624.1 150018370 5294714 complement(4094403..4095263) 1 NC_009617.1 PFAM: conserved hypothetical protein CHP02464; KEGG: cpr:CPR_0151 protein T24A6.7; hypothetical protein 4095263 5294714 Cbei_3546 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310624.1 4094403 R 290402 CDS YP_001310625.1 150018371 5294715 complement(4095618..4096481) 1 NC_009617.1 PFAM: protein of unknown function DUF89; KEGG: tma:TM0176 hypothetical protein; hypothetical protein 4096481 5294715 Cbei_3547 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310625.1 4095618 R 290402 CDS YP_001310626.1 150018372 5294716 complement(4096732..4098057) 1 NC_009617.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cth:Cthe_2566 radical SAM; radical SAM domain-containing protein 4098057 5294716 Cbei_3548 Clostridium beijerinckii NCIMB 8052 radical SAM domain-containing protein YP_001310626.1 4096732 R 290402 CDS YP_001310627.1 150018373 5294717 4098470..4098676 1 NC_009617.1 PFAM: helix-turn-helix domain protein; KEGG: dsy:DSY0155 hypothetical protein; XRE family transcriptional regulator 4098676 5294717 Cbei_3549 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001310627.1 4098470 D 290402 CDS YP_001310628.1 150018374 5294718 4098673..4099104 1 NC_009617.1 KEGG: dsy:DSY0156 hypothetical protein; hypothetical protein 4099104 5294718 Cbei_3550 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310628.1 4098673 D 290402 CDS YP_001310629.1 150018375 5294719 complement(4099319..4100464) 1 NC_009617.1 KEGG: ctc:CTC00840 hypothetical protein; hypothetical protein 4100464 5294719 Cbei_3551 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310629.1 4099319 R 290402 CDS YP_001310630.1 150018376 5294720 complement(4100633..4101007) 1 NC_009617.1 KEGG: dsy:DSY1203 hypothetical protein; hypothetical protein 4101007 5294720 Cbei_3552 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310630.1 4100633 R 290402 CDS YP_001310631.1 150018377 5294721 complement(4101031..4102050) 1 NC_009617.1 KEGG: cth:Cthe_0028 uncharacterized protein, YcgL-like protein; hypothetical protein 4102050 5294721 Cbei_3553 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310631.1 4101031 R 290402 CDS YP_001310632.1 150018378 5294722 complement(4102047..4102826) 1 NC_009617.1 KEGG: bce:BC0397 hypothetical cytosolic protein; hypothetical protein 4102826 5294722 Cbei_3554 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310632.1 4102047 R 290402 CDS YP_001310633.1 150018379 5294723 complement(4102925..4103278) 1 NC_009617.1 hypothetical protein 4103278 5294723 Cbei_3555 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310633.1 4102925 R 290402 CDS YP_001310634.1 150018380 5294724 complement(4103383..4104606) 1 NC_009617.1 PFAM: protein of unknown function UPF0027; KEGG: cth:Cthe_0250 protein of unknown function UPF0027; hypothetical protein 4104606 5294724 Cbei_3556 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310634.1 4103383 R 290402 CDS YP_001310635.1 150018381 5294725 complement(4104775..4106235) 1 NC_009617.1 PFAM: TROVE domain protein; KEGG: cth:Cthe_2764 TROVE domain containing protein; TROVE domain-containing protein 4106235 5294725 Cbei_3557 Clostridium beijerinckii NCIMB 8052 TROVE domain-containing protein YP_001310635.1 4104775 R 290402 CDS YP_001310636.1 150018382 5294726 complement(4107261..4108274) 1 NC_009617.1 KEGG: cth:Cthe_2763 hypothetical protein; hypothetical protein 4108274 5294726 Cbei_3558 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310636.1 4107261 R 290402 CDS YP_001310637.1 150018383 5294727 complement(4108258..4109562) 1 NC_009617.1 KEGG: cth:Cthe_2762 transcriptional regulator-like protein; transcriptional regulator-like protein 4109562 5294727 Cbei_3559 Clostridium beijerinckii NCIMB 8052 transcriptional regulator-like protein YP_001310637.1 4108258 R 290402 CDS YP_001310638.1 150018384 5294728 complement(4109590..4110108) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bth:BT_2381 acetyltransferase; N-acetyltransferase GCN5 4110108 5294728 Cbei_3560 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001310638.1 4109590 R 290402 CDS YP_001310639.1 150018385 5294729 complement(4110466..4111638) 1 NC_009617.1 Catalyzes the formylation of AICAR with 10-formyl-tetrahydrofolate to yield FAICAR and tetrahydrofolate; 5-aminoimidazole-4-carboxamide ribonucleotide transformylase 4111638 5294729 Cbei_3561 Clostridium beijerinckii NCIMB 8052 5-aminoimidazole-4-carboxamide ribonucleotide transformylase YP_001310639.1 4110466 R 290402 CDS YP_001310640.1 150018386 5294730 complement(4112037..4113233) 1 NC_009617.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: lac:LBA1723 transposase; transposase IS116/IS110/IS902 family protein 4113233 5294730 Cbei_3562 Clostridium beijerinckii NCIMB 8052 transposase IS116/IS110/IS902 family protein YP_001310640.1 4112037 R 290402 CDS YP_001310641.1 150018387 5294731 complement(4113563..4114012) 1 NC_009617.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 4114012 5294731 Cbei_3563 Clostridium beijerinckii NCIMB 8052 flavodoxin YP_001310641.1 4113563 R 290402 CDS YP_001310642.1 150018388 5294732 complement(4114283..4115545) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cpf:CPF_1057 sensor histidine kinase; histidine kinase 4115545 5294732 Cbei_3564 Clostridium beijerinckii NCIMB 8052 histidine kinase YP_001310642.1 4114283 R 290402 CDS YP_001310643.1 150018389 5294733 complement(4115538..4116218) 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cpf:CPF_1056 DNA-binding response regulator; two component transcriptional regulator 4116218 5294733 Cbei_3565 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001310643.1 4115538 R 290402 CDS YP_001310644.1 150018390 5294734 complement(4116211..4116765) 1 NC_009617.1 KEGG: cpf:CPF_1055 UBA/Ts-N domain protein; UBA/Ts-N domain-containing protein 4116765 5294734 Cbei_3566 Clostridium beijerinckii NCIMB 8052 UBA/Ts-N domain-containing protein YP_001310644.1 4116211 R 290402 CDS YP_001310645.1 150018391 5294735 complement(4117027..4117569) 1 NC_009617.1 KEGG: cpf:CPF_1054 UBA/Ts-N domain protein; UBA/Ts-N domain-containing protein 4117569 5294735 Cbei_3567 Clostridium beijerinckii NCIMB 8052 UBA/Ts-N domain-containing protein YP_001310645.1 4117027 R 290402 CDS YP_001310646.1 150018392 5294736 complement(4117694..4118986) 1 NC_009617.1 KEGG: ctc:CTC01787 hypothetical protein; hypothetical protein 4118986 5294736 Cbei_3568 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310646.1 4117694 R 290402 CDS YP_001310647.1 150018393 5294737 complement(4118991..4119548) 1 NC_009617.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 4119548 5294737 Cbei_3569 Clostridium beijerinckii NCIMB 8052 RNA polymerase factor sigma-70 YP_001310647.1 4118991 R 290402 CDS YP_001310648.1 150018394 5294738 complement(4119774..4120868) 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FMN-binding domain protein; KEGG: cac:CAC2762 polyferredoxin; FMN-binding domain-containing protein 4120868 5294738 Cbei_3570 Clostridium beijerinckii NCIMB 8052 FMN-binding domain-containing protein YP_001310648.1 4119774 R 290402 CDS YP_001310649.1 150018395 5294739 complement(4120890..4122092) 1 NC_009617.1 PFAM: FMN-binding domain protein; KEGG: dsy:DSY4227 hypothetical protein; FMN-binding domain-containing protein 4122092 5294739 Cbei_3571 Clostridium beijerinckii NCIMB 8052 FMN-binding domain-containing protein YP_001310649.1 4120890 R 290402 CDS YP_001310650.1 150018396 5294740 complement(4122500..4123456) 1 NC_009617.1 PFAM: ApbE family lipoprotein; KEGG: cac:CAC2766 thiamine biosynthesis lipoprotein ApbE; ApbE family lipoprotein 4123456 5294740 Cbei_3572 Clostridium beijerinckii NCIMB 8052 ApbE family lipoprotein YP_001310650.1 4122500 R 290402 CDS YP_001310651.1 150018397 5294741 4123771..4124103 1 NC_009617.1 PFAM: transcriptional regulator PadR family protein; KEGG: cpe:CPE0704 30S ribosomal protein homolog; PadR-like family transcriptional regulator 4124103 5294741 Cbei_3573 Clostridium beijerinckii NCIMB 8052 PadR-like family transcriptional regulator YP_001310651.1 4123771 D 290402 CDS YP_001310652.1 150018398 5294742 4124107..4124694 1 NC_009617.1 KEGG: cpf:CPF_0700 hypothetical protein; hypothetical protein 4124694 5294742 Cbei_3574 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310652.1 4124107 D 290402 CDS YP_001310653.1 150018399 5294743 complement(4125457..4126749) 1 NC_009617.1 KEGG: ctc:CTC01787 hypothetical protein; hypothetical protein 4126749 5294743 Cbei_3575 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310653.1 4125457 R 290402 CDS YP_001310654.1 150018400 5294744 complement(4126754..4127311) 1 NC_009617.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 4127311 5294744 Cbei_3576 Clostridium beijerinckii NCIMB 8052 RNA polymerase factor sigma-70 YP_001310654.1 4126754 R 290402 CDS YP_001310655.1 150018401 5294745 complement(4127530..4128099) 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: cac:CAC0201 transcriptional regulators, AcrR family; TetR family transcriptional regulator 4128099 5294745 Cbei_3577 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001310655.1 4127530 R 290402 CDS YP_001310656.1 150018402 5294746 4128253..4128762 1 NC_009617.1 KEGG: cac:CAC0722 predicted membrane protein; CF-9 family; CF-9 family membrane protein 4128762 5294746 Cbei_3578 Clostridium beijerinckii NCIMB 8052 CF-9 family membrane protein YP_001310656.1 4128253 D 290402 CDS YP_001310657.1 150018403 5294747 4129095..4130051 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; AraC-type transcriptional regulator domain protein; KEGG: dge:Dgeo_2236 transcriptional regulator, AraC family; AraC family transcriptional regulator 4130051 5294747 Cbei_3579 Clostridium beijerinckii NCIMB 8052 AraC family transcriptional regulator YP_001310657.1 4129095 D 290402 CDS YP_001310658.1 150018404 5294748 4130397..4130957 1 NC_009617.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: mac:MA0445 iron-sulfur flavoprotein; NADPH-dependent FMN reductase 4130957 5294748 Cbei_3580 Clostridium beijerinckii NCIMB 8052 NADPH-dependent FMN reductase YP_001310658.1 4130397 D 290402 CDS YP_001310659.1 150018405 5294749 complement(4131348..4131734) 1 NC_009617.1 KEGG: cpf:CPF_0183 hypothetical protein; hypothetical protein 4131734 5294749 Cbei_3581 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310659.1 4131348 R 290402 CDS YP_001310660.1 150018406 5294750 complement(4131887..4132975) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: tte:TTE1079 beta-lactamase regulatory protein 1; cell wall binding repeat-containing protein 4132975 5294750 Cbei_3582 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001310660.1 4131887 R 290402 CDS YP_001310661.1 150018407 5294751 complement(4133173..4134141) 1 NC_009617.1 PFAM: alpha/beta hydrolase fold; KEGG: dsy:DSY1555 hypothetical protein; alpha/beta fold family hydrolase 4134141 5294751 Cbei_3583 Clostridium beijerinckii NCIMB 8052 alpha/beta fold family hydrolase YP_001310661.1 4133173 R 290402 CDS YP_001310662.1 150018408 5294752 complement(4134191..4135228) 1 NC_009617.1 PFAM: alpha/beta hydrolase fold; KEGG: btl:BALH_2130 alpha/beta hydrolase; alpha/beta fold family hydrolase 4135228 5294752 Cbei_3584 Clostridium beijerinckii NCIMB 8052 alpha/beta fold family hydrolase YP_001310662.1 4134191 R 290402 CDS YP_001310663.1 150018409 5294753 complement(4135308..4135796) 1 NC_009617.1 hypothetical protein 4135796 5294753 Cbei_3585 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310663.1 4135308 R 290402 CDS YP_001310664.1 150018410 5296422 complement(4136673..4137446) 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cpr:CPR_2063 polyferredoxin; 4Fe-4S ferredoxin 4137446 5296422 Cbei_3587 Clostridium beijerinckii NCIMB 8052 4Fe-4S ferredoxin YP_001310664.1 4136673 R 290402 CDS YP_001310665.1 150018411 5294755 complement(4138144..4138458) 1 NC_009617.1 hypothetical protein 4138458 5294755 Cbei_3588 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310665.1 4138144 R 290402 CDS YP_001310666.1 150018412 5294756 complement(4138615..4139508) 1 NC_009617.1 PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: cac:CAC3360 transcriptional regulator, LysR family; LysR family transcriptional regulator 4139508 5294756 Cbei_3589 Clostridium beijerinckii NCIMB 8052 LysR family transcriptional regulator YP_001310666.1 4138615 R 290402 CDS YP_001310667.1 150018413 5294757 4139798..4140358 1 NC_009617.1 PFAM: nitroreductase; KEGG: bth:BT_1148 NADH dehydrogenase/NAD(P)H nitroreductase; nitroreductase 4140358 5294757 Cbei_3590 Clostridium beijerinckii NCIMB 8052 nitroreductase YP_001310667.1 4139798 D 290402 CDS YP_001310668.1 150018414 5294758 complement(4141544..4143070) 1 NC_009617.1 TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: tte:TTE2372 lysyl-tRNA synthetase class II; lysyl-tRNA synthetase 4143070 5294758 Cbei_3591 Clostridium beijerinckii NCIMB 8052 lysyl-tRNA synthetase YP_001310668.1 4141544 R 290402 CDS YP_001310669.1 150018415 5294759 complement(4143716..4144672) 1 NC_009617.1 PFAM: Ketopantoate reductase ApbA/PanE, N-terminal domain protein; KEGG: smu:SMU.296 hypothetical protein; ketopantoate reductase ApbA/PanE 4144672 5294759 Cbei_3592 Clostridium beijerinckii NCIMB 8052 ketopantoate reductase ApbA/PanE YP_001310669.1 4143716 R 290402 CDS YP_001310670.1 150018416 5294760 4144832..4145398 1 NC_009617.1 KEGG: bcl:ABC0634 transcriptional regulator, TetR family; TetR family transcriptional regulator 4145398 5294760 Cbei_3593 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001310670.1 4144832 D 290402 CDS YP_001310671.1 150018417 5296423 complement(4145835..4146356) 1 NC_009617.1 PFAM: transcriptional regulator PadR family protein; KEGG: cac:CAC0530 hypothetical protein; PadR-like family transcriptional regulator 4146356 5296423 Cbei_3595 Clostridium beijerinckii NCIMB 8052 PadR-like family transcriptional regulator YP_001310671.1 4145835 R 290402 CDS YP_001310672.1 150018418 5294762 complement(4146420..4147268) 1 NC_009617.1 PFAM: protein of unknown function DUF303, acetylesterase KEGG: cac:CAC0529 acetylxylan esterase related enzyme; hypothetical protein 4147268 5294762 Cbei_3596 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310672.1 4146420 R 290402 CDS YP_001310673.1 150018419 5294763 complement(4147707..4148279) 1 NC_009617.1 PFAM: flavin reductase domain protein, FMN-binding; KEGG: mac:MA2295 flavoredoxin Flr; flavin reductase domain-containing protein 4148279 5294763 Cbei_3597 Clostridium beijerinckii NCIMB 8052 flavin reductase domain-containing protein YP_001310673.1 4147707 R 290402 CDS YP_001310674.1 150018420 5294764 4148518..4148910 1 NC_009617.1 PFAM: regulatory protein, MerR; KEGG: lbr:LVIS_2182 predicted transcriptional regulator; MerR family transcriptional regulator 4148910 5294764 Cbei_3598 Clostridium beijerinckii NCIMB 8052 MerR family transcriptional regulator YP_001310674.1 4148518 D 290402 CDS YP_001310675.1 150018421 5294765 complement(4149028..4149831) 1 NC_009617.1 TIGRFAM: glutamate racemase; PFAM: Asp/Glu racemase; KEGG: bsu:BG12306 glutamate racemase; glutamate racemase 4149831 5294765 Cbei_3599 Clostridium beijerinckii NCIMB 8052 glutamate racemase YP_001310675.1 4149028 R 290402 CDS YP_001310676.1 150018422 5294766 4150243..4151085 1 NC_009617.1 PFAM: nitroreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cac:CAC2933 ferredoxin-like domain fused to nitroreductase-like domain; 4Fe-4S ferredoxin 4151085 5294766 Cbei_3600 Clostridium beijerinckii NCIMB 8052 4Fe-4S ferredoxin YP_001310676.1 4150243 D 290402 CDS YP_001310677.1 150018423 5294767 complement(4151196..4151777) 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: bja:bll5689 transcriptional regulatory protein; TetR family transcriptional regulator 4151777 5294767 Cbei_3601 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001310677.1 4151196 R 290402 CDS YP_001310678.1 150018424 5294768 complement(4151858..4152397) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rru:Rru_A2227 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4152397 5294768 Cbei_3602 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001310678.1 4151858 R 290402 CDS YP_001310679.1 150018425 5294769 4152786..4153472 1 NC_009617.1 PFAM: protein of unknown function DUF421; KEGG: cac:CAC1521 uncharacterized membrane protein, YetF/YdfS/YkjA/YrbG/YdfR B.subtilis ortholog; hypothetical protein 4153472 5294769 Cbei_3603 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310679.1 4152786 D 290402 CDS YP_001310680.1 150018426 5294770 complement(4153650..4154000) 1 NC_009617.1 KEGG: bcl:ABC1987 hypothetical protein; hypothetical protein 4154000 5294770 Cbei_3604 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310680.1 4153650 R 290402 CDS YP_001310681.1 150018427 5294771 complement(4154089..4154367) 1 NC_009617.1 hypothetical protein 4154367 5294771 Cbei_3605 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310681.1 4154089 R 290402 CDS YP_001310682.1 150018428 5294772 complement(4154639..4155175) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY1008 hypothetical protein; N-acetyltransferase GCN5 4155175 5294772 Cbei_3606 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001310682.1 4154639 R 290402 CDS YP_001310683.1 150018429 5294773 complement(4155432..4156370) 1 NC_009617.1 PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: lmo:lmo0364 hypothetical protein; helix-turn-helix, type 11 domain-containing protein 4156370 5294773 Cbei_3607 Clostridium beijerinckii NCIMB 8052 helix-turn-helix, type 11 domain-containing protein YP_001310683.1 4155432 R 290402 CDS YP_001310684.1 150018430 5294774 4156646..4157773 1 NC_009617.1 PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: bca:BCE_3147 Tn554-related, transposase A; phage integrase family protein 4157773 5294774 Cbei_3608 Clostridium beijerinckii NCIMB 8052 phage integrase family protein YP_001310684.1 4156646 D 290402 CDS YP_001310685.1 150018431 5294775 4157775..4159739 1 NC_009617.1 PFAM: phage integrase family protein; KEGG: sep:SE1612 transposition regulatory protein TnpB; phage integrase family protein 4159739 5294775 Cbei_3609 Clostridium beijerinckii NCIMB 8052 phage integrase family protein YP_001310685.1 4157775 D 290402 CDS YP_001310686.1 150018432 5294776 4159741..4160115 1 NC_009617.1 KEGG: bca:BCE_A0002 Tn554-related, transposase C; Tn554-related, transposase C 4160115 5294776 Cbei_3610 Clostridium beijerinckii NCIMB 8052 Tn554-related, transposase C YP_001310686.1 4159741 D 290402 CDS YP_001310687.1 150018433 5294777 4160173..4160871 1 NC_009617.1 hypothetical protein 4160871 5294777 Cbei_3611 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310687.1 4160173 D 290402 CDS YP_001310688.1 150018434 5294778 4160975..4161427 1 NC_009617.1 KEGG: bce:BC3594 PhnB protein; PhnB protein 4161427 5294778 Cbei_3612 Clostridium beijerinckii NCIMB 8052 PhnB protein YP_001310688.1 4160975 D 290402 CDS YP_001310689.1 150018435 5294779 complement(4161618..4161827) 1 NC_009617.1 KEGG: pde:Pden_0118 hypothetical protein; hypothetical protein 4161827 5294779 Cbei_3613 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310689.1 4161618 R 290402 CDS YP_001310690.1 150018436 5294780 complement(4161878..4162765) 1 NC_009617.1 KEGG: bld:BLi00263 hypothetical protein; hypothetical protein 4162765 5294780 Cbei_3614 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310690.1 4161878 R 290402 CDS YP_001310691.1 150018437 5294781 complement(4163300..4164169) 1 NC_009617.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; SEC-C motif domain protein; KEGG: cpe:CPE1382 probable methionine aminopeptidase; methionine aminopeptidase 4164169 5294781 Cbei_3615 Clostridium beijerinckii NCIMB 8052 methionine aminopeptidase YP_001310691.1 4163300 R 290402 CDS YP_001310692.1 150018438 5294782 complement(4164190..4164870) 1 NC_009617.1 PFAM: helix-turn-helix domain protein; KEGG: atc:AGR_C_2728 hypothetical protein; XRE family transcriptional regulator 4164870 5294782 Cbei_3616 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001310692.1 4164190 R 290402 CDS YP_001310693.1 150018439 5294783 complement(4165414..4166439) 1 NC_009617.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility C-terminal domain; KEGG: cac:CAC3503 nucleoside-diphosphate-sugar epimerase; NAD-dependent epimerase/dehydratase 4166439 5294783 Cbei_3617 Clostridium beijerinckii NCIMB 8052 NAD-dependent epimerase/dehydratase YP_001310693.1 4165414 R 290402 CDS YP_001310694.1 150018440 5294784 4166555..4167076 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: cac:CAC3504 transcriptional regulator, AcrR family; TetR family transcriptional regulator 4167076 5294784 Cbei_3618 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001310694.1 4166555 D 290402 CDS YP_001310695.1 150018441 5294785 complement(4167175..4167741) 1 NC_009617.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: cac:CAC3495 multimeric flavodoxin WrbA family protein; NAD(P)H dehydrogenase (quinone) 4167741 5294785 Cbei_3619 Clostridium beijerinckii NCIMB 8052 NAD(P)H dehydrogenase (quinone) YP_001310695.1 4167175 R 290402 CDS YP_001310696.1 150018442 5294786 4167898..4168314 1 NC_009617.1 PFAM: helix-turn-helix, HxlR type; KEGG: dsy:DSY0078 hypothetical protein; HxlR family transcriptional regulator 4168314 5294786 Cbei_3620 Clostridium beijerinckii NCIMB 8052 HxlR family transcriptional regulator YP_001310696.1 4167898 D 290402 CDS YP_001310697.1 150018443 5294787 complement(4168422..4169240) 1 NC_009617.1 KEGG: ctc:CTC00617 hypothetical protein; hypothetical protein 4169240 5294787 Cbei_3621 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310697.1 4168422 R 290402 CDS YP_001310698.1 150018444 5294788 complement(4169233..4169814) 1 NC_009617.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sth:STH169 RNA polymerase ECF-type sigma factor; ECF subfamily RNA polymerase sigma-24 factor 4169814 5294788 Cbei_3622 Clostridium beijerinckii NCIMB 8052 ECF subfamily RNA polymerase sigma-24 factor YP_001310698.1 4169233 R 290402 CDS YP_001310699.1 150018445 5294789 4170184..4171416 1 NC_009617.1 hypothetical protein 4171416 5294789 Cbei_3623 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310699.1 4170184 D 290402 CDS YP_001310700.1 150018446 5294790 4171483..4172727 1 NC_009617.1 KEGG: pfa:MAL13P1.145 hypothetical protein; hypothetical protein 4172727 5294790 Cbei_3624 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310700.1 4171483 D 290402 CDS YP_001310701.1 150018447 5294791 complement(4172987..4174981) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC00924 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4174981 5294791 Cbei_3625 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001310701.1 4172987 R 290402 CDS YP_001310702.1 150018448 5294792 complement(4175487..4176338) 1 NC_009617.1 KEGG: dsy:DSY1946 hypothetical protein; hypothetical protein 4176338 5294792 Cbei_3626 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310702.1 4175487 R 290402 CDS YP_001310703.1 150018449 5294793 complement(4176356..4176718) 1 NC_009617.1 KEGG: dsy:DSY4483 hypothetical protein; hypothetical protein 4176718 5294793 Cbei_3627 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310703.1 4176356 R 290402 CDS YP_001310704.1 150018450 5294794 complement(4176734..4177222) 1 NC_009617.1 TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein, MerR; KEGG: cpf:CPF_1346 transcriptional regulator, MerR family; DNA binding domain-containing protein 4177222 5294794 Cbei_3628 Clostridium beijerinckii NCIMB 8052 DNA binding domain-containing protein YP_001310704.1 4176734 R 290402 CDS YP_001310705.1 150018451 5294795 complement(4177709..4178740) 1 NC_009617.1 KEGG: cac:CA_P0077 uncharacterized Fe-S protein; hypothetical protein 4178740 5294795 Cbei_3629 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310705.1 4177709 R 290402 CDS YP_001310706.1 150018452 5294796 complement(4178927..4180105) 1 NC_009617.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase 4180105 5294796 Cbei_3630 Clostridium beijerinckii NCIMB 8052 acetyl-CoA acetyltransferase YP_001310706.1 4178927 R 290402 CDS YP_001310707.1 150018453 5294797 4180344..4181234 1 NC_009617.1 PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: stm:STM2644 transcriptional regulator; LysR family transcriptional regulator 4181234 5294797 Cbei_3631 Clostridium beijerinckii NCIMB 8052 LysR family transcriptional regulator YP_001310707.1 4180344 D 290402 CDS YP_001310708.1 150018454 5294798 complement(4181745..4182101) 1 NC_009617.1 hypothetical protein 4182101 5294798 Cbei_3632 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310708.1 4181745 R 290402 CDS YP_001310709.1 150018455 5294799 complement(4182705..4183469) 1 NC_009617.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bcl:ABC1107 short-chain alcohol dehydrogenase; short-chain dehydrogenase/reductase SDR 4183469 5294799 Cbei_3633 Clostridium beijerinckii NCIMB 8052 short-chain dehydrogenase/reductase SDR YP_001310709.1 4182705 R 290402 CDS YP_001310710.1 150018456 5294800 4183699..4184121 1 NC_009617.1 PFAM: regulatory protein, MerR; KEGG: lmf:LMOf2365_1497 transcriptional regulator, MerR family; MerR family transcriptional regulator 4184121 5294800 Cbei_3634 Clostridium beijerinckii NCIMB 8052 MerR family transcriptional regulator YP_001310710.1 4183699 D 290402 CDS YP_001310711.1 150018457 5294801 complement(4184663..4185844) 1 NC_009617.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: cno:NT01CX_1345 cation efflux family protein; cation diffusion facilitator family transporter 4185844 5294801 Cbei_3635 Clostridium beijerinckii NCIMB 8052 cation diffusion facilitator family transporter YP_001310711.1 4184663 R 290402 CDS YP_001310712.1 150018458 5294802 complement(4186149..4187510) 1 NC_009617.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cac:CAC2485 predicted membane protein, probable cation efflux pump (MDR-type); MATE efflux family protein 4187510 5294802 Cbei_3636 Clostridium beijerinckii NCIMB 8052 MATE efflux family protein YP_001310712.1 4186149 R 290402 CDS YP_001310713.1 150018459 5294803 complement(4187595..4188032) 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: cac:CAC2486 transcriptional regulator, MarR/EmrR family; MarR family transcriptional regulator 4188032 5294803 Cbei_3637 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001310713.1 4187595 R 290402 CDS YP_001310714.1 150018460 5294804 4188537..4189139 1 NC_009617.1 PFAM: Lytic transglycosylase, catalytic; lytic transglycosylase 4189139 5294804 Cbei_3638 Clostridium beijerinckii NCIMB 8052 lytic transglycosylase YP_001310714.1 4188537 D 290402 CDS YP_001310715.1 150018461 5294805 complement(4189643..4190167) 1 NC_009617.1 PFAM: VanZ family protein; KEGG: ctc:CTC01417 hypothetical protein; VanZ family protein 4190167 5294805 Cbei_3639 Clostridium beijerinckii NCIMB 8052 VanZ family protein YP_001310715.1 4189643 R 290402 CDS YP_001310716.1 150018462 5296424 complement(4191337..4192638) 1 NC_009617.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: dsy:DSY3551 hypothetical protein; transposase IS116/IS110/IS902 family protein 4192638 5296424 Cbei_3641 Clostridium beijerinckii NCIMB 8052 transposase IS116/IS110/IS902 family protein YP_001310716.1 4191337 R 290402 CDS YP_001310717.1 150018463 5294807 4193060..4193908 1 NC_009617.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 4193908 5294807 Cbei_3642 Clostridium beijerinckii NCIMB 8052 2-oxoglutarate ferredoxin oxidoreductase subunit beta YP_001310717.1 4193060 D 290402 CDS YP_001310718.1 150018464 5294808 complement(4194069..4194875) 1 NC_009617.1 PFAM: nitroreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cac:CAC3483 nitroreductase fused to ferredoxin domain; nitroreductase 4194875 5294808 Cbei_3643 Clostridium beijerinckii NCIMB 8052 nitroreductase YP_001310718.1 4194069 R 290402 CDS YP_001310719.1 150018465 5294809 complement(4195274..4195852) 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: lsa:LSA0965 transcriptional regulator, TerR family; TetR family transcriptional regulator 4195852 5294809 Cbei_3644 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001310719.1 4195274 R 290402 CDS YP_001310720.1 150018466 5294810 complement(4196193..4196951) 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mla:Mlab_0618 hypothetical protein; 4Fe-4S ferredoxin 4196951 5294810 Cbei_3645 Clostridium beijerinckii NCIMB 8052 4Fe-4S ferredoxin YP_001310720.1 4196193 R 290402 CDS YP_001310721.1 150018467 5294811 4197068..4197634 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: cac:CAC0723 transcriptional regulator, AcrR family; TetR family transcriptional regulator 4197634 5294811 Cbei_3646 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001310721.1 4197068 D 290402 CDS YP_001310722.1 150018468 5294812 complement(4197895..4198350) 1 NC_009617.1 KEGG: cac:CAC2505 uncharacterized membrane protein, YXJN B.subtilis homolog; hypothetical protein 4198350 5294812 Cbei_3647 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310722.1 4197895 R 290402 CDS YP_001310723.1 150018469 5294813 complement(4198598..4199173) 1 NC_009617.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: aba:Acid345_1952 isoprenylcysteine carboxyl methyltransferase; isoprenylcysteine carboxyl methyltransferase 4199173 5294813 Cbei_3648 Clostridium beijerinckii NCIMB 8052 isoprenylcysteine carboxyl methyltransferase YP_001310723.1 4198598 R 290402 CDS YP_001310724.1 150018470 5294814 complement(4199200..4199667) 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: lmo:lmo0840 hypothetical protein; MarR family transcriptional regulator 4199667 5294814 Cbei_3649 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001310724.1 4199200 R 290402 CDS YP_001310725.1 150018471 5294815 complement(4199973..4200572) 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: ava:Ava_2488 transcriptional regulator, TetR family; TetR family transcriptional regulator 4200572 5294815 Cbei_3650 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001310725.1 4199973 R 290402 CDS YP_001310726.1 150018472 5294816 4200871..4202103 1 NC_009617.1 PFAM: major facilitator superfamily MFS_1; KEGG: pub:SAR11_0830 probable MFS transporter (major facilitator superfamily); major facilitator superfamily transporter 4202103 5294816 Cbei_3651 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001310726.1 4200871 D 290402 CDS YP_001310727.1 150018473 5294817 complement(4202429..4203271) 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 3; KEGG: bja:blr2224 ABC transporter amino acid-binding protein; extracellular solute-binding protein 4203271 5294817 Cbei_3652 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001310727.1 4202429 R 290402 CDS YP_001310728.1 150018474 5294818 complement(4203584..4204018) 1 NC_009617.1 hypothetical protein 4204018 5294818 Cbei_3653 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310728.1 4203584 R 290402 CDS YP_001310729.1 150018475 5294819 complement(4204031..4204579) 1 NC_009617.1 PFAM: LytTr DNA-binding region; KEGG: lmf:LMOf2365_1005 hypothetical protein; response regulator receiver protein 4204579 5294819 Cbei_3654 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001310729.1 4204031 R 290402 CDS YP_001310730.1 150018476 5294820 complement(4204854..4205384) 1 NC_009617.1 KEGG: rpa:RPA2585 hypothetical protein; hypothetical protein 4205384 5294820 Cbei_3655 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310730.1 4204854 R 290402 CDS YP_001310731.1 150018477 5294821 complement(4205377..4206759) 1 NC_009617.1 KEGG: pca:Pcar_2448 predicted iron-sulfur flavoprotein; iron-sulfur flavoprotein 4206759 5294821 Cbei_3656 Clostridium beijerinckii NCIMB 8052 iron-sulfur flavoprotein YP_001310731.1 4205377 R 290402 CDS YP_001310732.1 150018478 5296425 4208488..4209312 1 NC_009617.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: ade:Adeh_1435 protein of unknown function DUF6, transmembrane; hypothetical protein 4209312 5296425 Cbei_3658 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310732.1 4208488 D 290402 CDS YP_001310733.1 150018479 5294823 complement(4209709..4210560) 1 NC_009617.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; KEGG: llm:llmg_0247 UDP-glucose 4-epimerase; NAD-dependent epimerase/dehydratase 4210560 5294823 Cbei_3659 Clostridium beijerinckii NCIMB 8052 NAD-dependent epimerase/dehydratase YP_001310733.1 4209709 R 290402 CDS YP_001310734.1 150018480 5294824 4210701..4211534 1 NC_009617.1 SMART: helix-turn-helix domain protein; KEGG: rle:RL4049 hypothetical protein; helix-turn-helix domain-containing protein 4211534 5294824 Cbei_3660 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001310734.1 4210701 D 290402 CDS YP_001310735.1 150018481 5294825 complement(4211860..4212504) 1 NC_009617.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: hpa:HPAG1_1376 60 kDa inner-membrane protein; 60 kDa inner membrane insertion protein 4212504 5294825 Cbei_3661 Clostridium beijerinckii NCIMB 8052 60 kDa inner membrane insertion protein YP_001310735.1 4211860 R 290402 CDS YP_001310736.1 150018482 5294826 complement(4213487..4214590) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: btk:BT9727_2340 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 4214590 5294826 Cbei_3662 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001310736.1 4213487 R 290402 CDS YP_001310737.1 150018483 5294827 complement(4214580..4215269) 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bcz:BCZK2302 DNA-binding response regulator; two component transcriptional regulator 4215269 5294827 Cbei_3663 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001310737.1 4214580 R 290402 CDS YP_001310738.1 150018484 5294828 complement(4215290..4215979) 1 NC_009617.1 PFAM: peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin; KEGG: bld:BLi02284 YodJ; peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin 4215979 5294828 Cbei_3664 Clostridium beijerinckii NCIMB 8052 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin YP_001310738.1 4215290 R 290402 CDS YP_001310739.1 150018485 5294829 complement(4216281..4217162) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: ctc:CTC00159 sensory transduction protein kinase; histidine kinase 4217162 5294829 Cbei_3665 Clostridium beijerinckii NCIMB 8052 histidine kinase YP_001310739.1 4216281 R 290402 CDS YP_001310740.1 150018486 5294830 complement(4217187..4217921) 1 NC_009617.1 hypothetical protein 4217921 5294830 Cbei_3666 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310740.1 4217187 R 290402 CDS YP_001310741.1 150018487 5294831 complement(4217937..4218662) 1 NC_009617.1 KEGG: cac:CAC0862 transmembrane protein; hypothetical protein 4218662 5294831 Cbei_3667 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310741.1 4217937 R 290402 CDS YP_001310742.1 150018488 5294832 complement(4218655..4219575) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC0861 ABC-type multidrug transport system, ATPase component; multidrug ABC transporter ATPase 4219575 5294832 Cbei_3668 Clostridium beijerinckii NCIMB 8052 multidrug ABC transporter ATPase YP_001310742.1 4218655 R 290402 CDS YP_001310743.1 150018489 5294833 complement(4219722..4220402) 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cac:CAC0860 two-component response regulator; two component transcriptional regulator 4220402 5294833 Cbei_3669 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001310743.1 4219722 R 290402 CDS YP_001310744.1 150018490 5294834 complement(4221632..4222546) 1 NC_009617.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: mta:Moth_2231 RNA-directed DNA polymerase (reverse transcriptase); RNA-directed DNA polymerase 4222546 5294834 Cbei_3670 Clostridium beijerinckii NCIMB 8052 RNA-directed DNA polymerase YP_001310744.1 4221632 R 290402 CDS YP_001310745.1 150018491 5294835 complement(4223140..4225137) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC1387 membrane associated chemotaxis sensory transducer protein (MSP domain and HamP domain); methyl-accepting chemotaxis sensory transducer 4225137 5294835 Cbei_3671 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001310745.1 4223140 R 290402 CDS YP_001310746.1 150018492 5294836 complement(4225435..4227900) 1 NC_009617.1 KEGG: ctc:CTC01609 hypothetical protein; dual specificity protein phosphatase 4227900 5294836 Cbei_3672 Clostridium beijerinckii NCIMB 8052 dual specificity protein phosphatase YP_001310746.1 4225435 R 290402 CDS YP_001310747.1 150018493 5294837 4228426..4229418 1 NC_009617.1 PFAM: Choloylglycine hydrolase; KEGG: bld:BLi04217 YxeI; penicillin amidase 4229418 5294837 Cbei_3673 Clostridium beijerinckii NCIMB 8052 penicillin amidase YP_001310747.1 4228426 D 290402 CDS YP_001310748.1 150018494 5294838 complement(4229636..4230754) 1 NC_009617.1 KEGG: bca:BCE_1830 hypothetical protein; hypothetical protein 4230754 5294838 Cbei_3674 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310748.1 4229636 R 290402 CDS YP_001310749.1 150018495 5294839 complement(4230756..4231301) 1 NC_009617.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 4231301 5294839 Cbei_3675 Clostridium beijerinckii NCIMB 8052 RNA polymerase factor sigma-70 YP_001310749.1 4230756 R 290402 CDS YP_001310750.1 150018496 5294840 4231794..4232018 1 NC_009617.1 hypothetical protein 4232018 5294840 Cbei_3676 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310750.1 4231794 D 290402 CDS YP_001310751.1 150018497 5294841 4232146..4232364 1 NC_009617.1 KEGG: chy:CHY_0145 hypothetical protein; hypothetical protein 4232364 5294841 Cbei_3677 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310751.1 4232146 D 290402 CDS YP_001310752.1 150018498 5294842 4232500..4232919 1 NC_009617.1 KEGG: ctc:CTC01989 transposase-related protein; transposase-like protein 4232919 5294842 Cbei_3678 Clostridium beijerinckii NCIMB 8052 transposase-like protein YP_001310752.1 4232500 D 290402 CDS YP_001310753.1 150018499 5294843 4232922..4233830 1 NC_009617.1 PFAM: Integrase, catalytic region; KEGG: ctc:CTC01990 transposase; integrase catalytic subunit 4233830 5294843 Cbei_3679 Clostridium beijerinckii NCIMB 8052 integrase catalytic subunit YP_001310753.1 4232922 D 290402 CDS YP_001310754.1 150018500 5294844 4234185..4234499 1 NC_009617.1 hypothetical protein 4234499 5294844 Cbei_3680 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310754.1 4234185 D 290402 CDS YP_001310755.1 150018501 5294845 4234556..4234873 1 NC_009617.1 hypothetical protein 4234873 5294845 Cbei_3681 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310755.1 4234556 D 290402 CDS YP_001310756.1 150018502 5294846 complement(4235443..4236462) 1 NC_009617.1 KEGG: pfa:MAL13P1.323 hypothetical protein; hypothetical protein 4236462 5294846 Cbei_3682 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310756.1 4235443 R 290402 CDS YP_001310757.1 150018503 5294847 complement(4236649..4237323) 1 NC_009617.1 KEGG: cac:CAC0029 distantly related to cell wall-associated hydrolase, similar to YycO Bacillus subtilis; cell wall-associated hydrolase-like protein 4237323 5294847 Cbei_3683 Clostridium beijerinckii NCIMB 8052 cell wall-associated hydrolase-like protein YP_001310757.1 4236649 R 290402 CDS YP_001310758.1 150018504 5294848 complement(4237692..4238360) 1 NC_009617.1 SMART: ATPase AAA; KEGG: btl:BALH_2727 ABC transporter ATP-binding protein; ATPase AAA 4238360 5294848 Cbei_3684 Clostridium beijerinckii NCIMB 8052 ATPase AAA YP_001310758.1 4237692 R 290402 CDS YP_001310759.1 150018505 5294849 complement(4238363..4239595) 1 NC_009617.1 KEGG: cpr:CPR_1980 permease, domain protein; hypothetical protein 4239595 5294849 Cbei_3685 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310759.1 4238363 R 290402 CDS YP_001310760.1 150018506 5294850 complement(4239610..4240713) 1 NC_009617.1 KEGG: cac:CAC3614 uncharacterized conserved membrane protein, possible permease; hypothetical protein 4240713 5294850 Cbei_3686 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310760.1 4239610 R 290402 CDS YP_001310761.1 150018507 5294851 complement(4240939..4241322) 1 NC_009617.1 hypothetical protein 4241322 5294851 Cbei_3687 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310761.1 4240939 R 290402 CDS YP_001310762.1 150018508 5294852 complement(4241411..4241992) 1 NC_009617.1 hypothetical protein 4241992 5294852 Cbei_3688 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310762.1 4241411 R 290402 CDS YP_001310763.1 150018509 5296426 complement(4244005..4244685) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cth:Cthe_0384 ABC transporter protein; ABC transporter 4244685 5296426 Cbei_3690 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001310763.1 4244005 R 290402 CDS YP_001310764.1 150018510 5294854 complement(4244682..4245905) 1 NC_009617.1 PFAM: protein of unknown function DUF214; KEGG: btl:BALH_2728 ABC transporter permease; hypothetical protein 4245905 5294854 Cbei_3691 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310764.1 4244682 R 290402 CDS YP_001310765.1 150018511 5294855 complement(4245911..4247011) 1 NC_009617.1 PFAM: protein of unknown function DUF214; KEGG: cpr:CPR_1981 permease, domain protein; hypothetical protein 4247011 5294855 Cbei_3692 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310765.1 4245911 R 290402 CDS YP_001310766.1 150018512 5294856 complement(4247703..4248431) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC0773 ABC-type cobalt transport protein ATPase component; cobalt ABC transporter ATPase 4248431 5294856 Cbei_3693 Clostridium beijerinckii NCIMB 8052 cobalt ABC transporter ATPase YP_001310766.1 4247703 R 290402 CDS YP_001310767.1 150018513 5294857 complement(4248436..4249230) 1 NC_009617.1 PFAM: cobalt transport protein; KEGG: cac:CAC0772 cobalt permease; cobalt ABC transporter permease 4249230 5294857 Cbei_3694 Clostridium beijerinckii NCIMB 8052 cobalt ABC transporter permease YP_001310767.1 4248436 R 290402 CDS YP_001310768.1 150018514 5294858 complement(4249398..4250387) 1 NC_009617.1 catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM 4250387 5294858 Cbei_3695 Clostridium beijerinckii NCIMB 8052 cobalt transport protein CbiM YP_001310768.1 4249398 R 290402 CDS YP_001310769.1 150018515 5294859 complement(4250712..4251371) 1 NC_009617.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; KEGG: sat:SYN_00599 Ni2+ insertion GTPase; hydrogenase nickel incorporation protein HypB 4251371 5294859 Cbei_3696 Clostridium beijerinckii NCIMB 8052 hydrogenase nickel incorporation protein HypB YP_001310769.1 4250712 R 290402 CDS YP_001310770.1 150018516 5294860 4251715..4252137 1 NC_009617.1 KEGG: cth:Cthe_1015 hypothetical protein; hypothetical protein 4252137 5294860 Cbei_3697 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310770.1 4251715 D 290402 CDS YP_001310771.1 150018517 5294861 4252609..4253157 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: cac:CAC3406 transcriptional regulator, MarR/EmrR family; MarR family transcriptional regulator 4253157 5294861 Cbei_3698 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001310771.1 4252609 D 290402 CDS YP_001310772.1 150018518 5294862 4253184..4254629 1 NC_009617.1 PFAM: beta-lactamase; KEGG: bld:BLi00328 hypothetical protein; beta-lactamase 4254629 5294862 Cbei_3699 Clostridium beijerinckii NCIMB 8052 beta-lactamase YP_001310772.1 4253184 D 290402 CDS YP_001310773.1 150018519 5294863 complement(4254824..4256128) 1 NC_009617.1 PFAM: protein of unknown function DUF445; KEGG: btl:BALH_1569 hypothetical protein; hypothetical protein 4256128 5294863 Cbei_3700 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310773.1 4254824 R 290402 CDS YP_001310774.1 150018520 5294864 complement(4256139..4257185) 1 NC_009617.1 PFAM: ApbE family lipoprotein; KEGG: tte:TTE2482 Membrane-associated lipoprotein involved in thiamine biosynthesis; ApbE family lipoprotein 4257185 5294864 Cbei_3701 Clostridium beijerinckii NCIMB 8052 ApbE family lipoprotein YP_001310774.1 4256139 R 290402 CDS YP_001310775.1 150018521 5294865 4258477..4259391 1 NC_009617.1 PFAM: periplasmic binding protein; KEGG: cpr:CPR_1115 iron compound ABC transporter iron-binding protein; periplasmic binding protein 4259391 5294865 Cbei_3702 Clostridium beijerinckii NCIMB 8052 periplasmic binding protein YP_001310775.1 4258477 D 290402 CDS YP_001310776.1 150018522 5294866 4259384..4260406 1 NC_009617.1 PFAM: transport system permease; KEGG: cpr:CPR_1116 ABC transporter permease, FecCD family; transport system permease 4260406 5294866 Cbei_3703 Clostridium beijerinckii NCIMB 8052 transport system permease YP_001310776.1 4259384 D 290402 CDS YP_001310777.1 150018523 5294867 4260429..4261184 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpe:CPE1043 probable iron(III) dicitrate transport system; ABC transporter 4261184 5294867 Cbei_3704 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001310777.1 4260429 D 290402 CDS YP_001310778.1 150018524 5294868 complement(4261502..4261972) 1 NC_009617.1 KEGG: fnu:FN2046 acetyltransferase; hypothetical protein 4261972 5294868 Cbei_3705 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310778.1 4261502 R 290402 CDS YP_001310779.1 150018525 5294869 complement(4262393..4263361) 1 NC_009617.1 KEGG: sth:STH2320 LuxR family transcriptional regulator; LuxR family transcriptional regulator 4263361 5294869 Cbei_3706 Clostridium beijerinckii NCIMB 8052 LuxR family transcriptional regulator YP_001310779.1 4262393 R 290402 CDS YP_001310780.1 150018526 5294870 complement(4263722..4264819) 1 NC_009617.1 TIGRFAM: diguanylate cyclase; SMART: GGDEF domain containing protein; KEGG: cac:CAC3544 membrane associated GGDEF domain containing protein; diguanylate cyclase 4264819 5294870 Cbei_3707 Clostridium beijerinckii NCIMB 8052 diguanylate cyclase YP_001310780.1 4263722 R 290402 CDS YP_001310781.1 150018527 5294871 complement(4265302..4266417) 1 NC_009617.1 KEGG: btl:BALH_2820 possible transporter; transporter 4266417 5294871 Cbei_3708 Clostridium beijerinckii NCIMB 8052 transporter YP_001310781.1 4265302 R 290402 CDS YP_001310782.1 150018528 5294872 complement(4266909..4267226) 1 NC_009617.1 KEGG: cpr:CPR_0183 cobalt/cobalamin transport protein CbiN; cobalt/cobalamin transport protein CbiN 4267226 5294872 Cbei_3709 Clostridium beijerinckii NCIMB 8052 cobalt/cobalamin transport protein CbiN YP_001310782.1 4266909 R 290402 CDS YP_001310783.1 150018529 5294873 complement(4267226..4267978) 1 NC_009617.1 TIGRFAM: cobalamin biosynthesis protein CbiM; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: dsy:DSY1479 cobalamin biosynthesis protein CbiM; cobalamin biosynthesis protein CbiM 4267978 5294873 Cbei_3710 Clostridium beijerinckii NCIMB 8052 cobalamin biosynthesis protein CbiM YP_001310783.1 4267226 R 290402 CDS YP_001310784.1 150018530 5294874 complement(4268190..4269017) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mac:MA3551 cobalt ABC transporter ATP-binding protein; ABC transporter 4269017 5294874 Cbei_3711 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001310784.1 4268190 R 290402 CDS YP_001310785.1 150018531 5294875 complement(4269390..4270220) 1 NC_009617.1 TIGRFAM: cobalt ABC transporter inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: cpr:CPR_0184 cobalt ABC transporter permease CbiQ; cobalt ABC transporter inner membrane subunit CbiQ 4270220 5294875 Cbei_3712 Clostridium beijerinckii NCIMB 8052 cobalt ABC transporter inner membrane subunit CbiQ YP_001310785.1 4269390 R 290402 CDS YP_001310786.1 150018532 5294876 4271426..4271584 1 NC_009617.1 PFAM: protein of unknown function DUF1540; KEGG: cpf:CPF_0355 hypothetical protein; hypothetical protein 4271584 5294876 Cbei_3713 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310786.1 4271426 D 290402 CDS YP_001310787.1 150018533 5294877 complement(4271761..4271910) 1 NC_009617.1 hypothetical protein 4271910 5294877 Cbei_3714 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310787.1 4271761 R 290402 CDS YP_001310788.1 150018534 5294878 complement(4272816..4273142) 1 NC_009617.1 KEGG: pfl:PFL_2781 hypothetical protein; hypothetical protein 4273142 5294878 Cbei_3715 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310788.1 4272816 R 290402 CDS YP_001310789.1 150018535 5294879 complement(4273366..4274391) 1 NC_009617.1 PFAM: Domain of unknown function DUF1835; KEGG: cno:NT01CX_2353 hypothetical protein; hypothetical protein 4274391 5294879 Cbei_3716 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310789.1 4273366 R 290402 CDS YP_001310790.1 150018536 5294880 4275095..4275892 1 NC_009617.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pau:PA14_63410 hypothetical protein; type 11 methyltransferase 4275892 5294880 Cbei_3717 Clostridium beijerinckii NCIMB 8052 type 11 methyltransferase YP_001310790.1 4275095 D 290402 CDS YP_001310791.1 150018537 5294881 complement(4276283..4276696) 1 NC_009617.1 KEGG: cpf:CPF_0742 hypothetical protein; hypothetical protein 4276696 5294881 Cbei_3718 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310791.1 4276283 R 290402 CDS YP_001310792.1 150018538 5294882 complement(4277682..4278272) 1 NC_009617.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: lwe:lwe2312 maltose transacetylase; maltose O-acetyltransferase 4278272 5294882 Cbei_3719 Clostridium beijerinckii NCIMB 8052 maltose O-acetyltransferase YP_001310792.1 4277682 R 290402 CDS YP_001310793.1 150018539 5294883 complement(4278312..4279040) 1 NC_009617.1 KEGG: cpe:CPE0580 probable iron-sulfur binding reductase; hypothetical protein 4279040 5294883 Cbei_3720 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310793.1 4278312 R 290402 CDS YP_001310794.1 150018540 5294884 4279406..4279843 1 NC_009617.1 PFAM: LytTr DNA-binding region; KEGG: lmf:LMOf2365_1005 hypothetical protein; response regulator receiver protein 4279843 5294884 Cbei_3721 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001310794.1 4279406 D 290402 CDS YP_001310795.1 150018541 5294885 4279860..4280294 1 NC_009617.1 hypothetical protein 4280294 5294885 Cbei_3722 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310795.1 4279860 D 290402 CDS YP_001310796.1 150018542 5294886 complement(4280466..4280753) 1 NC_009617.1 hypothetical protein 4280753 5294886 Cbei_3723 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310796.1 4280466 R 290402 CDS YP_001310797.1 150018543 5294887 complement(4281183..4282025) 1 NC_009617.1 PFAM: aldo/keto reductase; KEGG: zmo:ZMO1344 2,5-diketo-D-gluconate reductase; 2,5-didehydrogluconate reductase 4282025 5294887 Cbei_3724 Clostridium beijerinckii NCIMB 8052 2,5-didehydrogluconate reductase YP_001310797.1 4281183 R 290402 CDS YP_001310798.1 150018544 5294888 4282325..4284469 1 NC_009617.1 PFAM: Peptidoglycan-binding domain 1 protein; Domain of unknown function DUF1906; KEGG: bsu:BG12736 hypothetical protein; hypothetical protein 4284469 5294888 Cbei_3725 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310798.1 4282325 D 290402 CDS YP_001310799.1 150018545 5294889 complement(4284531..4285064) 1 NC_009617.1 hypothetical protein 4285064 5294889 Cbei_3726 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310799.1 4284531 R 290402 CDS YP_001310800.1 150018546 5294890 complement(4285116..4285589) 1 NC_009617.1 hypothetical protein 4285589 5294890 Cbei_3727 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310800.1 4285116 R 290402 CDS YP_001310801.1 150018547 5294891 complement(4285949..4286743) 1 NC_009617.1 PFAM: glycoside hydrolase, family 25; KEGG: cpf:CPF_0973 glycosyl hydrolase, family 25; glycoside hydrolase 4286743 5294891 Cbei_3728 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001310801.1 4285949 R 290402 CDS YP_001310802.1 150018548 5294892 4287258..4288193 1 NC_009617.1 hypothetical protein 4288193 5294892 Cbei_3729 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310802.1 4287258 D 290402 CDS YP_001310803.1 150018549 5294893 complement(4288413..4288826) 1 NC_009617.1 KEGG: ctc:CTC01083 hypothetical protein; hypothetical protein 4288826 5294893 Cbei_3730 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310803.1 4288413 R 290402 CDS YP_001310804.1 150018550 5294894 complement(4289789..4290445) 1 NC_009617.1 KEGG: cpr:CPR_C0032 hypothetical protein; hypothetical protein 4290445 5294894 Cbei_3731 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310804.1 4289789 R 290402 CDS YP_001310805.1 150018551 5294895 complement(4290450..4290935) 1 NC_009617.1 SMART: ATPase AAA; KEGG: bha:BH3541 hypothetical protein; ATPase AAA 4290935 5294895 Cbei_3732 Clostridium beijerinckii NCIMB 8052 ATPase AAA YP_001310805.1 4290450 R 290402 CDS YP_001310806.1 150018552 5294896 complement(4291123..4291911) 1 NC_009617.1 KEGG: lin:lin0086 hypothetical protein; hypothetical protein 4291911 5294896 Cbei_3733 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310806.1 4291123 R 290402 CDS YP_001310807.1 150018553 5294897 complement(4291958..4292146) 1 NC_009617.1 hypothetical protein 4292146 5294897 Cbei_3734 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310807.1 4291958 R 290402 CDS YP_001310808.1 150018554 5294898 complement(4292241..4292447) 1 NC_009617.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 4292447 5294898 Cbei_3735 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001310808.1 4292241 R 290402 CDS YP_001310809.1 150018555 5294899 complement(4293237..4294472) 1 NC_009617.1 PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC0762 permease, probably tetracycline resistance protein; major facilitator superfamily transporter 4294472 5294899 Cbei_3736 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001310809.1 4293237 R 290402 CDS YP_001310810.1 150018556 5294900 complement(4294662..4295303) 1 NC_009617.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: mac:MA0445 iron-sulfur flavoprotein; NADPH-dependent FMN reductase 4295303 5294900 Cbei_3737 Clostridium beijerinckii NCIMB 8052 NADPH-dependent FMN reductase YP_001310810.1 4294662 R 290402 CDS YP_001310811.1 150018557 5294901 complement(4295744..4296964) 1 NC_009617.1 PFAM: YibE/F family protein; KEGG: cac:CAC0206 hypothetical protein; hypothetical protein 4296964 5294901 Cbei_3738 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310811.1 4295744 R 290402 CDS YP_001310812.1 150018558 5294902 complement(4297076..4298734) 1 NC_009617.1 PFAM: metallophosphoesterase; KEGG: cac:CAC0205 predicted phosphohydrolase, Icc family; metallophosphoesterase 4298734 5294902 Cbei_3739 Clostridium beijerinckii NCIMB 8052 metallophosphoesterase YP_001310812.1 4297076 R 290402 CDS YP_001310813.1 150018559 5294903 complement(4299506..4299988) 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: cac:CAC0763 transcriptional regulator, MarR family; MarR family transcriptional regulator 4299988 5294903 Cbei_3740 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001310813.1 4299506 R 290402 CDS YP_001310814.1 150018560 5294904 complement(4300116..4300778) 1 NC_009617.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bfs:BF0801 phosphoglycolate phosphatase; HAD family hydrolase 4300778 5294904 Cbei_3741 Clostridium beijerinckii NCIMB 8052 HAD family hydrolase YP_001310814.1 4300116 R 290402 CDS YP_001310815.1 150018561 5294905 complement(4300949..4301659) 1 NC_009617.1 KEGG: cac:CAC0207 hypothetical protein, CF-6 family; hypothetical protein 4301659 5294905 Cbei_3742 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310815.1 4300949 R 290402 CDS YP_001310816.1 150018562 5294906 4302172..4302705 1 NC_009617.1 PFAM: sigma-70 region 4 domain protein; KEGG: ctc:pE88_61 transcriptional activator TetR; ECF subfamily RNA polymerase sigma-24 factor 4302705 5294906 Cbei_3743 Clostridium beijerinckii NCIMB 8052 ECF subfamily RNA polymerase sigma-24 factor YP_001310816.1 4302172 D 290402 CDS YP_001310817.1 150018563 5294907 4302710..4302931 1 NC_009617.1 KEGG: ctc:pE88_04 UviB homologous protein; UviB-like protein 4302931 5294907 Cbei_3744 Clostridium beijerinckii NCIMB 8052 UviB-like protein YP_001310817.1 4302710 D 290402 CDS YP_001310818.1 150018564 5294908 4303144..4303677 1 NC_009617.1 hypothetical protein 4303677 5294908 Cbei_3745 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310818.1 4303144 D 290402 CDS YP_001310819.1 150018565 5294909 4304079..4304399 1 NC_009617.1 hypothetical protein 4304399 5294909 Cbei_3746 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310819.1 4304079 D 290402 CDS YP_001310820.1 150018566 5294910 complement(4304461..4304763) 1 NC_009617.1 KEGG: bld:BLi03761 YwkF; hypothetical protein 4304763 5294910 Cbei_3747 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310820.1 4304461 R 290402 CDS YP_001310821.1 150018567 5294911 complement(4304861..4305181) 1 NC_009617.1 hypothetical protein 4305181 5294911 Cbei_3748 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310821.1 4304861 R 290402 CDS YP_001310822.1 150018568 5294912 complement(4305333..4306412) 1 NC_009617.1 PFAM: helix-turn-helix domain protein; KEGG: dsy:DSY1013 hypothetical protein; XRE family transcriptional regulator 4306412 5294912 Cbei_3749 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001310822.1 4305333 R 290402 CDS YP_001310823.1 150018569 5294913 complement(4306613..4307134) 1 NC_009617.1 PFAM: protein of unknown function DUF1706; KEGG: cno:NT01CX_2000 hypothetical protein; hypothetical protein 4307134 5294913 Cbei_3750 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310823.1 4306613 R 290402 CDS YP_001310824.1 150018570 5294914 complement(4307295..4307762) 1 NC_009617.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mla:Mlab_1725 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 4307762 5294914 Cbei_3751 Clostridium beijerinckii NCIMB 8052 glyoxalase/bleomycin resistance protein/dioxygenase YP_001310824.1 4307295 R 290402 CDS YP_001310825.1 150018571 5294915 complement(4307764..4308150) 1 NC_009617.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bxe:Bxe_C0569 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 4308150 5294915 Cbei_3752 Clostridium beijerinckii NCIMB 8052 carboxymuconolactone decarboxylase YP_001310825.1 4307764 R 290402 CDS YP_001310826.1 150018572 5294916 complement(4308216..4308593) 1 NC_009617.1 KEGG: cac:CAC2531 S-adenosylmethionine-dependent methyltransferase; S-adenosylmethionine-dependent methyltransferase 4308593 5294916 Cbei_3753 Clostridium beijerinckii NCIMB 8052 S-adenosylmethionine-dependent methyltransferase YP_001310826.1 4308216 R 290402 CDS YP_001310827.1 150018573 5294917 complement(4308611..4308826) 1 NC_009617.1 KEGG: cac:CAC2531 S-adenosylmethionine-dependent methyltransferase; S-adenosylmethionine-dependent methyltransferase 4308826 5294917 Cbei_3754 Clostridium beijerinckii NCIMB 8052 S-adenosylmethionine-dependent methyltransferase YP_001310827.1 4308611 R 290402 CDS YP_001310828.1 150018574 5294918 4309315..4309731 1 NC_009617.1 hypothetical protein 4309731 5294918 Cbei_3755 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310828.1 4309315 D 290402 CDS YP_001310829.1 150018575 5294919 complement(4310230..4310565) 1 NC_009617.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: dsy:DSY2733 hypothetical protein; cupin 4310565 5294919 Cbei_3756 Clostridium beijerinckii NCIMB 8052 cupin YP_001310829.1 4310230 R 290402 CDS YP_001310830.1 150018576 5294920 complement(4310570..4310908) 1 NC_009617.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: ctc:CTC00439 hypothetical protein; cupin 4310908 5294920 Cbei_3757 Clostridium beijerinckii NCIMB 8052 cupin YP_001310830.1 4310570 R 290402 CDS YP_001310831.1 150018577 5294921 complement(4311211..4315128) 1 NC_009617.1 TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: mhu:Mhun_1325 CoA enzyme activase; CoA-substrate-specific enzyme activase 4315128 5294921 Cbei_3758 Clostridium beijerinckii NCIMB 8052 CoA-substrate-specific enzyme activase YP_001310831.1 4311211 R 290402 CDS YP_001310832.1 150018578 5294922 complement(4315560..4316930) 1 NC_009617.1 PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: bsu:BG12424 spore coat protein, similar to reticuline oxidase; FAD linked oxidase domain-containing protein 4316930 5294922 Cbei_3759 Clostridium beijerinckii NCIMB 8052 FAD linked oxidase domain-containing protein YP_001310832.1 4315560 R 290402 CDS YP_001310833.1 150018579 5294923 complement(4317406..4318209) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY1005 hypothetical protein; ABC transporter 4318209 5294923 Cbei_3760 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001310833.1 4317406 R 290402 CDS YP_001310834.1 150018580 5294924 complement(4318209..4319240) 1 NC_009617.1 PFAM: transport system permease; KEGG: dsy:DSY1004 hypothetical protein; transport system permease 4319240 5294924 Cbei_3761 Clostridium beijerinckii NCIMB 8052 transport system permease YP_001310834.1 4318209 R 290402 CDS YP_001310835.1 150018581 5294925 complement(4319237..4320235) 1 NC_009617.1 PFAM: transport system permease; KEGG: dsy:DSY1003 hypothetical protein; transport system permease 4320235 5294925 Cbei_3762 Clostridium beijerinckii NCIMB 8052 transport system permease YP_001310835.1 4319237 R 290402 CDS YP_001310836.1 150018582 5294926 complement(4320235..4321260) 1 NC_009617.1 PFAM: periplasmic binding protein; KEGG: dsy:DSY1002 hypothetical protein; periplasmic binding protein 4321260 5294926 Cbei_3763 Clostridium beijerinckii NCIMB 8052 periplasmic binding protein YP_001310836.1 4320235 R 290402 CDS YP_001310837.1 150018583 5294927 complement(4321918..4323291) 1 NC_009617.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: dsy:DSY1272 hypothetical protein; sugar (glycoside-Pentoside-hexuronide) transporter 4323291 5294927 Cbei_3764 Clostridium beijerinckii NCIMB 8052 sugar (glycoside-Pentoside-hexuronide) transporter YP_001310837.1 4321918 R 290402 CDS YP_001310838.1 150018584 5294928 complement(4323577..4325646) 1 NC_009617.1 PFAM: glycoside hydrolase, family 3 domain protein; KEGG: aor:AO090005000337 beta-glucosidase-related glycosidases Pfam: Glyco_hydro_3 Glyco_hydro_3_C; glycoside hydrolase family protein 4325646 5294928 Cbei_3765 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase family protein YP_001310838.1 4323577 R 290402 CDS YP_001310839.1 150018585 5294929 complement(4325649..4326581) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: cpr:CPR_1432 transcriptional regulator, AraC family; AraC family transcriptional regulator 4326581 5294929 Cbei_3766 Clostridium beijerinckii NCIMB 8052 AraC family transcriptional regulator YP_001310839.1 4325649 R 290402 CDS YP_001310840.1 150018586 5294930 4326996..4327400 1 NC_009617.1 PFAM: FMN-binding domain protein; KEGG: cac:CAC2767 hypothetical protein; FMN-binding domain-containing protein 4327400 5294930 Cbei_3767 Clostridium beijerinckii NCIMB 8052 FMN-binding domain-containing protein YP_001310840.1 4326996 D 290402 CDS YP_001310841.1 150018587 5294931 complement(4327553..4328026) 1 NC_009617.1 TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease, EIIA 1 domain; KEGG: tte:TTE0469 Phosphotransferase system IIA components; PTS system glucose subfamily transporter subunit IIA 4328026 5294931 Cbei_3768 Clostridium beijerinckii NCIMB 8052 PTS system glucose subfamily transporter subunit IIA YP_001310841.1 4327553 R 290402 CDS YP_001310842.1 150018588 5294932 complement(4328136..4328993) 1 NC_009617.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: cpr:CPR_1309 HAD hydrolase, IIB family; cof family hydrolase 4328993 5294932 Cbei_3769 Clostridium beijerinckii NCIMB 8052 cof family hydrolase YP_001310842.1 4328136 R 290402 CDS YP_001310843.1 150018589 5294933 complement(4328983..4330461) 1 NC_009617.1 PFAM: PRD domain protein; Helix-turn-helix, type 11 domain protein; KEGG: tte:TTE0340 transcriptional regulator; transcriptional antiterminator BglG 4330461 5294933 Cbei_3770 Clostridium beijerinckii NCIMB 8052 transcriptional antiterminator BglG YP_001310843.1 4328983 R 290402 CDS YP_001310844.1 150018590 5294934 complement(4330682..4332829) 1 NC_009617.1 PFAM: glycoside hydrolase, family 3 domain protein; KEGG: efa:EF1238 glycosyl hydrolase, family 3; glycoside hydrolase family protein 4332829 5294934 Cbei_3771 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase family protein YP_001310844.1 4330682 R 290402 CDS YP_001310845.1 150018591 5294935 complement(4332842..4334236) 1 NC_009617.1 TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: bcl:ABC1453 PTS system, sucrose-specific enzyme II, BC component; PTS system glucose-like transporter subunit IIB 4334236 5294935 Cbei_3772 Clostridium beijerinckii NCIMB 8052 PTS system glucose-like transporter subunit IIB YP_001310845.1 4332842 R 290402 CDS YP_001310846.1 150018592 5294936 complement(4334229..4335602) 1 NC_009617.1 TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32, N terminal domain protein; Glycosyl hydrolase family 32, C-terminal domain protein; SMART: glycoside hydrolase, family 32; KEGG: bld:BLi04016 sucrase-6-phosphate hydrolase; RBL02848; sucrose-6-phosphate hydrolase 4335602 5294936 Cbei_3773 Clostridium beijerinckii NCIMB 8052 sucrose-6-phosphate hydrolase YP_001310846.1 4334229 R 290402 CDS YP_001310847.1 150018593 5294937 complement(4335981..4337354) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cac:CAC0565 histidine kinase (HAMP, HisKA and HATPase domains); integral membrane sensor signal transduction histidine kinase 4337354 5294937 Cbei_3774 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001310847.1 4335981 R 290402 CDS YP_001310848.1 150018594 5294938 complement(4337367..4338065) 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ctc:CTC00805 two-component response regulator; two component transcriptional regulator 4338065 5294938 Cbei_3775 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001310848.1 4337367 R 290402 CDS YP_001310849.1 150018595 5294939 complement(4338067..4339332) 1 NC_009617.1 PFAM: glycosyl transferase, family 39; KEGG: cpr:CPR_0954 dolichyl-phosphate-mannose-protein mannosyltransferase family protein; glycosyl transferase family protein 4339332 5294939 Cbei_3776 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001310849.1 4338067 R 290402 CDS YP_001310850.1 150018596 5294940 complement(4339344..4339688) 1 NC_009617.1 KEGG: mta:Moth_2226 small multidrug resistance transmembrane protein; small multidrug resistance transmembrane protein 4339688 5294940 Cbei_3777 Clostridium beijerinckii NCIMB 8052 small multidrug resistance transmembrane protein YP_001310850.1 4339344 R 290402 CDS YP_001310851.1 150018597 5294941 complement(4339859..4340554) 1 NC_009617.1 PFAM: glycosyl transferase, family 2; KEGG: cth:Cthe_3099 glycosyl transferase, family 2; glycosyl transferase family protein 4340554 5294941 Cbei_3778 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001310851.1 4339859 R 290402 CDS YP_001310852.1 150018598 5294942 complement(4340910..4342367) 1 NC_009617.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eca:ECA0910 flavoprotein subunit of a reductase; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 4342367 5294942 Cbei_3779 Clostridium beijerinckii NCIMB 8052 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_001310852.1 4340910 R 290402 CDS YP_001310853.1 150018599 5294943 complement(4342428..4343672) 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: gme:Gmet_2080 respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; 4Fe-4S ferredoxin 4343672 5294943 Cbei_3780 Clostridium beijerinckii NCIMB 8052 4Fe-4S ferredoxin YP_001310853.1 4342428 R 290402 CDS YP_001310854.1 150018600 5294944 complement(4343686..4345794) 1 NC_009617.1 PFAM: ferredoxin; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: eba:ebA5294 subunit of oxidoreductase of unknown function, conserved in Azoarcus-type benzoate degradation gene clusters; ferredoxin 4345794 5294944 Cbei_3781 Clostridium beijerinckii NCIMB 8052 ferredoxin YP_001310854.1 4343686 R 290402 CDS YP_001310855.1 150018601 5294945 4345894..4346712 1 NC_009617.1 PFAM: regulatory protein, MerR; KEGG: bha:BH3496 transcriptional regulator of multidrug-efflux transporter genes; MerR family transcriptional regulator 4346712 5294945 Cbei_3782 Clostridium beijerinckii NCIMB 8052 MerR family transcriptional regulator YP_001310855.1 4345894 D 290402 CDS YP_001310856.1 150018602 5294946 4346992..4347813 1 NC_009617.1 PFAM: chemotaxis sensory transducer; KEGG: cac:CAC0741 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4347813 5294946 Cbei_3783 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001310856.1 4346992 D 290402 CDS YP_001310857.1 150018603 5294947 complement(4348378..4349145) 1 NC_009617.1 KEGG: det:DET0571 hypothetical protein; hypothetical protein 4349145 5294947 Cbei_3784 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310857.1 4348378 R 290402 CDS YP_001310858.1 150018604 5294948 complement(4349253..4349915) 1 NC_009617.1 PFAM: LuxR family transcriptional regulator; response regulator receiver; KEGG: cac:CAC2939 response regulator (CheY-like receiver domain and HTH-type DNA-binding domain); two component LuxR family transcriptional regulator 4349915 5294948 Cbei_3785 Clostridium beijerinckii NCIMB 8052 two component LuxR family transcriptional regulator YP_001310858.1 4349253 R 290402 CDS YP_001310859.1 150018605 5294949 complement(4349908..4351206) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: cac:CAC0239 histidine kinase-like ATPase; integral membrane sensor signal transduction histidine kinase 4351206 5294949 Cbei_3786 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001310859.1 4349908 R 290402 CDS YP_001310860.1 150018606 5294950 4351520..4352485 1 NC_009617.1 KEGG: pfa:PF11_0218 hypothetical protein; hypothetical protein 4352485 5294950 Cbei_3787 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310860.1 4351520 D 290402 CDS YP_001310861.1 150018607 5294951 4352490..4353026 1 NC_009617.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: bsu:BG11573 RNA polymerase ECF-type sigma factor; ECF subfamily RNA polymerase sigma-24 factor 4353026 5294951 Cbei_3788 Clostridium beijerinckii NCIMB 8052 ECF subfamily RNA polymerase sigma-24 factor YP_001310861.1 4352490 D 290402 CDS YP_001310862.1 150018608 5294952 4353317..4353820 1 NC_009617.1 KEGG: cac:CAC0563 predicted membrane protein; membrane protein 4353820 5294952 Cbei_3789 Clostridium beijerinckii NCIMB 8052 membrane protein YP_001310862.1 4353317 D 290402 CDS YP_001310863.1 150018609 5294953 complement(4354071..4355786) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01211 methyl-accepting chemotaxis protein TlpA; methyl-accepting chemotaxis sensory transducer 4355786 5294953 Cbei_3790 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001310863.1 4354071 R 290402 CDS YP_001310864.1 150018610 5294954 complement(4356132..4356563) 1 NC_009617.1 PFAM: MOSC domain containing protein; KEGG: gme:Gmet_0302 MOSC; MOSC domain-containing protein 4356563 5294954 Cbei_3791 Clostridium beijerinckii NCIMB 8052 MOSC domain-containing protein YP_001310864.1 4356132 R 290402 CDS YP_001310865.1 150018611 5294955 complement(4356572..4357042) 1 NC_009617.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: cac:CAC1992 molybdenum cofactor biosynthesis enzyme, MoaC; molybdenum cofactor biosynthesis protein C 4357042 5294955 Cbei_3792 Clostridium beijerinckii NCIMB 8052 molybdenum cofactor biosynthesis protein C YP_001310865.1 4356572 R 290402 CDS YP_001310866.1 150018612 5294956 complement(4357047..4358003) 1 NC_009617.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dsy:DSY3488 hypothetical protein; molybdenum cofactor biosynthesis protein A 4358003 5294956 Cbei_3793 Clostridium beijerinckii NCIMB 8052 molybdenum cofactor biosynthesis protein A YP_001310866.1 4357047 R 290402 CDS YP_001310867.1 150018613 5294957 complement(4357996..4358622) 1 NC_009617.1 KEGG: pca:Pcar_1839 formate dehydrogenase accessory protein FdhD; formate dehydrogenase accessory protein FdhD 4358622 5294957 Cbei_3794 Clostridium beijerinckii NCIMB 8052 formate dehydrogenase accessory protein FdhD YP_001310867.1 4357996 R 290402 CDS YP_001310868.1 150018614 5294958 complement(4358627..4359196) 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: sth:STH3292 electron transport protein; 4Fe-4S ferredoxin 4359196 5294958 Cbei_3795 Clostridium beijerinckii NCIMB 8052 4Fe-4S ferredoxin YP_001310868.1 4358627 R 290402 CDS YP_001310869.1 150018615 5294959 complement(4359197..4360582) 1 NC_009617.1 TIGRFAM: hydrogenase, Fe-only; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; iron hydrogenase, small subunit; hydrogenase large subunit domain protein; KEGG: sth:STH3293 iron hydrogenase; hydrogenase, Fe-only 4360582 5294959 Cbei_3796 Clostridium beijerinckii NCIMB 8052 hydrogenase, Fe-only YP_001310869.1 4359197 R 290402 CDS YP_001310870.1 150018616 5294960 complement(4360601..4361155) 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: sth:STH3294 electron transport protein; 4Fe-4S ferredoxin 4361155 5294960 Cbei_3797 Clostridium beijerinckii NCIMB 8052 4Fe-4S ferredoxin YP_001310870.1 4360601 R 290402 CDS YP_001310871.1 150018617 5294961 complement(4361577..4362368) 1 NC_009617.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase, subunit FdhD; KEGG: chy:CHY_0800 formate dehydrogenase accessory protein; formate dehydrogenase family accessory protein FdhD 4362368 5294961 Cbei_3798 Clostridium beijerinckii NCIMB 8052 formate dehydrogenase family accessory protein FdhD YP_001310871.1 4361577 R 290402 CDS YP_001310872.1 150018618 5294962 complement(4362346..4362924) 1 NC_009617.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: gsu:GSU3147 molybdopterin-guanine dinucleotide biosynthesis protein MobB; molybdopterin-guanine dinucleotide biosynthesis protein MobB 4362924 5294962 Cbei_3799 Clostridium beijerinckii NCIMB 8052 molybdopterin-guanine dinucleotide biosynthesis protein MobB YP_001310872.1 4362346 R 290402 CDS YP_001310873.1 150018619 5294963 complement(4362902..4364113) 1 NC_009617.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: sat:SYN_00272 molybdopterin biosynthesis MoeA protein; molybdenum cofactor synthesis domain-containing protein 4364113 5294963 Cbei_3800 Clostridium beijerinckii NCIMB 8052 molybdenum cofactor synthesis domain-containing protein YP_001310873.1 4362902 R 290402 CDS YP_001310874.1 150018620 5294964 complement(4364248..4366389) 1 NC_009617.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rru:Rru_A0324 formate dehydrogenase, alpha subunit; formate dehydrogenase subunit alpha 4366389 5294964 Cbei_3801 Clostridium beijerinckii NCIMB 8052 formate dehydrogenase subunit alpha YP_001310874.1 4364248 R 290402 CDS YP_001310875.1 150018621 5294965 complement(4366608..4366958) 1 NC_009617.1 hypothetical protein 4366958 5294965 Cbei_3802 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310875.1 4366608 R 290402 CDS YP_001310876.1 150018622 5294966 4367236..4367724 1 NC_009617.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; KEGG: cac:CAC2022 molybdopterin biosynthesis enzyme, MoaB; molybdenum cofactor synthesis domain-containing protein 4367724 5294966 Cbei_3803 Clostridium beijerinckii NCIMB 8052 molybdenum cofactor synthesis domain-containing protein YP_001310876.1 4367236 D 290402 CDS YP_001310877.1 150018623 5294967 complement(4367902..4369593) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01881 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4369593 5294967 Cbei_3804 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001310877.1 4367902 R 290402 CDS YP_001310878.1 150018624 5294968 complement(4370101..4370835) 1 NC_009617.1 KEGG: mst:Msp_1287 hypothetical multicopy protein B 1; hypothetical protein 4370835 5294968 Cbei_3805 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310878.1 4370101 R 290402 CDS YP_001310879.1 150018625 5294969 complement(4370869..4372581) 1 NC_009617.1 PFAM: ATPase AAA, central domain protein; SMART: ATPase AAA; KEGG: bld:BLi04176 hypothetical protein; ATPase central domain-containing protein 4372581 5294969 Cbei_3806 Clostridium beijerinckii NCIMB 8052 ATPase central domain-containing protein YP_001310879.1 4370869 R 290402 CDS YP_001310880.1 150018626 5294970 complement(4372565..4373188) 1 NC_009617.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; KEGG: bld:BLi04172 anaerobic ribonucleoside-triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein 4373188 5294970 Cbei_3807 Clostridium beijerinckii NCIMB 8052 anaerobic ribonucleoside-triphosphate reductase activating protein YP_001310880.1 4372565 R 290402 CDS YP_001310881.1 150018627 5294971 complement(4373188..4374093) 1 NC_009617.1 KEGG: pfa:PFL1930w hypothetical protein; hypothetical protein 4374093 5294971 Cbei_3808 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310881.1 4373188 R 290402 CDS YP_001310882.1 150018628 5294972 complement(4374095..4374310) 1 NC_009617.1 KEGG: mst:Msp_1552 hypothetical protein; hypothetical protein 4374310 5294972 Cbei_3809 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310882.1 4374095 R 290402 CDS YP_001310883.1 150018629 5294973 complement(4375124..4376017) 1 NC_009617.1 PFAM: ROK family protein; KEGG: bha:BH0797 glucose kinase; ROK family protein 4376017 5294973 Cbei_3810 Clostridium beijerinckii NCIMB 8052 ROK family protein YP_001310883.1 4375124 R 290402 CDS YP_001310884.1 150018630 5294974 complement(4376176..4376499) 1 NC_009617.1 PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: cpr:CPR_2600 phosphotransferase system enzyme II, PtcA; PTS system lactose/cellobiose-specific transporter subunit IIA 4376499 5294974 Cbei_3811 Clostridium beijerinckii NCIMB 8052 PTS system lactose/cellobiose-specific transporter subunit IIA YP_001310884.1 4376176 R 290402 CDS YP_001310885.1 150018631 5294975 complement(4376511..4376813) 1 NC_009617.1 PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: lwe:lwe2728 PTS system, beta-glucoside-specific, IIB component; phosphotransferase system, lactose/cellobiose-specific IIB subunit 4376813 5294975 Cbei_3812 Clostridium beijerinckii NCIMB 8052 phosphotransferase system, lactose/cellobiose-specific IIB subunit YP_001310885.1 4376511 R 290402 CDS YP_001310886.1 150018632 5294976 complement(4376852..4378153) 1 NC_009617.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system, EIIC; KEGG: lmf:LMOf2365_2774 PTS system, beta-glucoside-specific, IIC component; PTS system lactose/cellobiose family transporter subunit IIC 4378153 5294976 Cbei_3813 Clostridium beijerinckii NCIMB 8052 PTS system lactose/cellobiose family transporter subunit IIC YP_001310886.1 4376852 R 290402 CDS YP_001310887.1 150018633 5294977 complement(4378170..4379558) 1 NC_009617.1 PFAM: glycoside hydrolase, family 1; KEGG: lin:lin0391 beta-glucosidase; beta-glucosidase 4379558 5294977 Cbei_3814 Clostridium beijerinckii NCIMB 8052 beta-glucosidase YP_001310887.1 4378170 R 290402 CDS YP_001310888.1 150018634 5294978 4379769..4380479 1 NC_009617.1 PFAM: GntR family transcriptional regulator; UbiC transcription regulator-associated domain protein; KEGG: lin:lin0390 hypothetical protein; GntR family transcriptional regulator 4380479 5294978 Cbei_3815 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001310888.1 4379769 D 290402 CDS YP_001310889.1 150018635 5294979 complement(4380702..4382120) 1 NC_009617.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; KEGG: ecj:JW2214 fused response regulator of ato opeon, in two-component system with AtoS; two component, sigma54 specific, Fis family transcriptional regulator 4382120 5294979 Cbei_3816 Clostridium beijerinckii NCIMB 8052 two component, sigma54 specific, Fis family transcriptional regulator YP_001310889.1 4380702 R 290402 CDS YP_001310890.1 150018636 5296427 complement(4382855..4384678) 1 NC_009617.1 with AtoC is a member of a two-component regulatory system involved in the transcriptional regulation of the ato genes for acetoacetate metabolism; sensory histidine kinase AtoS 4384678 5296427 Cbei_3818 Clostridium beijerinckii NCIMB 8052 sensory histidine kinase AtoS YP_001310890.1 4382855 R 290402 CDS YP_001310891.1 150018637 5294981 complement(4384889..4386415) 1 NC_009617.1 PFAM: coenzyme A transferase; KEGG: ctc:CTC00708 acetyl-coA:acetoacetyl-coA transferase alpha subunit; coenzyme A transferase 4386415 5294981 Cbei_3819 Clostridium beijerinckii NCIMB 8052 coenzyme A transferase YP_001310891.1 4384889 R 290402 CDS YP_001310892.1 150018638 5294982 complement(4386474..4387421) 1 NC_009617.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: blo:BL0058 possible butyryl-CoA dehydrogenase; NAD-binding 3-hydroxyacyl-CoA dehydrogenase 4387421 5294982 Cbei_3820 Clostridium beijerinckii NCIMB 8052 NAD-binding 3-hydroxyacyl-CoA dehydrogenase YP_001310892.1 4386474 R 290402 CDS YP_001310893.1 150018639 5294983 complement(4387600..4388925) 1 NC_009617.1 PFAM: short chain fatty acid transporter; KEGG: bur:Bcep18194_B1677 hypothetical protein; short chain fatty acid transporter 4388925 5294983 Cbei_3821 Clostridium beijerinckii NCIMB 8052 short chain fatty acid transporter YP_001310893.1 4387600 R 290402 CDS YP_001310894.1 150018640 5294984 complement(4389298..4389660) 1 NC_009617.1 hypothetical protein 4389660 5294984 Cbei_3822 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310894.1 4389298 R 290402 CDS YP_001310895.1 150018641 5294985 complement(4390074..4390919) 1 NC_009617.1 PFAM: chemotaxis sensory transducer; KEGG: cac:CAC1524 methyl-accepting chemotaxis-like domain (chemotaxis sensory transducer); methyl-accepting chemotaxis sensory transducer 4390919 5294985 Cbei_3823 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001310895.1 4390074 R 290402 CDS YP_001310896.1 150018642 5294986 complement(4391332..4391880) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cpf:CPF_1059 acetyltransferase, GNAT family; N-acetyltransferase GCN5 4391880 5294986 Cbei_3824 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001310896.1 4391332 R 290402 CDS YP_001310897.1 150018643 5294987 complement(4392211..4393005) 1 NC_009617.1 KEGG: sth:STH1742 ABC transporter permease; ABC transporter permease 4393005 5294987 Cbei_3825 Clostridium beijerinckii NCIMB 8052 ABC transporter permease YP_001310897.1 4392211 R 290402 CDS YP_001310898.1 150018644 5294988 complement(4393024..4393950) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mbu:Mbur_1837 ABC transporter ATPase subunit; ABC transporter 4393950 5294988 Cbei_3826 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001310898.1 4393024 R 290402 CDS YP_001310899.1 150018645 5294989 complement(4393943..4395058) 1 NC_009617.1 PFAM: helix-turn-helix domain protein; KEGG: bcz:BCZK3019 DNA-binding protein; possible transcriptional regulator; XRE family transcriptional regulator 4395058 5294989 Cbei_3827 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001310899.1 4393943 R 290402 CDS YP_001310900.1 150018646 5296428 complement(4396092..4396670) 1 NC_009617.1 PFAM: ThiJ/PfpI domain protein; KEGG: bcz:BCZK3357 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; ThiJ/PfpI domain-containing protein 4396670 5296428 Cbei_3829 Clostridium beijerinckii NCIMB 8052 ThiJ/PfpI domain-containing protein YP_001310900.1 4396092 R 290402 CDS YP_001310901.1 150018647 5294991 complement(4396921..4397313) 1 NC_009617.1 hypothetical protein 4397313 5294991 Cbei_3830 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310901.1 4396921 R 290402 CDS YP_001310902.1 150018648 5294992 complement(4397815..4398459) 1 NC_009617.1 PFAM: DTW domain containing protein; KEGG: ppr:PBPRA0133 hypothetical protein; DTW domain-containing protein 4398459 5294992 Cbei_3831 Clostridium beijerinckii NCIMB 8052 DTW domain-containing protein YP_001310902.1 4397815 R 290402 CDS YP_001310903.1 150018649 5294993 4399026..4400432 1 NC_009617.1 PFAM: aldehyde dehydrogenase; KEGG: rru:Rru_A0914 aldehyde dehydrogenase; aldehyde dehydrogenase 4400432 5294993 Cbei_3832 Clostridium beijerinckii NCIMB 8052 aldehyde dehydrogenase YP_001310903.1 4399026 D 290402 CDS YP_001310904.1 150018650 5294994 4400524..4401177 1 NC_009617.1 TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; KEGG: cac:CA_P0163 butyrate-acetoacetate CoA-transferase subunit A; 3-oxoacid CoA-transferase subunit A 4401177 5294994 Cbei_3833 Clostridium beijerinckii NCIMB 8052 3-oxoacid CoA-transferase subunit A YP_001310904.1 4400524 D 290402 CDS YP_001310905.1 150018651 5294995 4401178..4401843 1 NC_009617.1 TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; KEGG: tte:TTE0721 Acyl-CoA:acetate CoA transferase beta subunit; 3-oxoacid CoA-transferase subunit B 4401843 5294995 Cbei_3834 Clostridium beijerinckii NCIMB 8052 3-oxoacid CoA-transferase subunit B YP_001310905.1 4401178 D 290402 CDS YP_001310906.1 150018652 5294996 4401916..4402656 1 NC_009617.1 converts acetoacetate to acetone and carbon dioxide; acetoacetate decarboxylase 4402656 5294996 Cbei_3835 Clostridium beijerinckii NCIMB 8052 acetoacetate decarboxylase YP_001310906.1 4401916 D 290402 CDS YP_001310907.1 150018653 5294997 complement(4403060..4403908) 1 NC_009617.1 PFAM: peptidase C1A, papain; KEGG: cac:CA_P0004 cysteine protease; peptidase C1A, papain 4403908 5294997 Cbei_3836 Clostridium beijerinckii NCIMB 8052 peptidase C1A, papain YP_001310907.1 4403060 R 290402 CDS YP_001310908.1 150018654 5294998 complement(4404594..4405241) 1 NC_009617.1 PFAM: protein of unknown function DUF975; KEGG: bth:BT_3893 hypothetical protein; hypothetical protein 4405241 5294998 Cbei_3837 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310908.1 4404594 R 290402 CDS YP_001310909.1 150018655 5294999 complement(4405483..4405938) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC3374 predicted acetyltransferase; N-acetyltransferase GCN5 4405938 5294999 Cbei_3838 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001310909.1 4405483 R 290402 CDS YP_001310910.1 150018656 5295000 complement(4406057..4406650) 1 NC_009617.1 PFAM: protein of unknown function DUF205; KEGG: cac:CAC2500 hypothetical protein; membrane protein 4406650 5295000 Cbei_3839 Clostridium beijerinckii NCIMB 8052 membrane protein YP_001310910.1 4406057 R 290402 CDS YP_001310911.1 150018657 5295001 complement(4406708..4407019) 1 NC_009617.1 hypothetical protein 4407019 5295001 Cbei_3840 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310911.1 4406708 R 290402 CDS YP_001310912.1 150018658 5295002 complement(4407043..4407381) 1 NC_009617.1 hypothetical protein 4407381 5295002 Cbei_3841 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310912.1 4407043 R 290402 CDS YP_001310913.1 150018659 5295003 complement(4407539..4407826) 1 NC_009617.1 PFAM: YCII-related; KEGG: cac:CA_P0038 uncharacterized conserved protein, YCII family; hypothetical protein 4407826 5295003 Cbei_3842 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310913.1 4407539 R 290402 CDS YP_001310914.1 150018660 5295004 complement(4407978..4408577) 1 NC_009617.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: vvy:VVA0614 acetyltransferase; hexapaptide repeat-containing transferase 4408577 5295004 Cbei_3843 Clostridium beijerinckii NCIMB 8052 hexapaptide repeat-containing transferase YP_001310914.1 4407978 R 290402 CDS YP_001310915.1 150018661 5295005 complement(4408747..4409217) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bca:BCE_1694 acetyltransferase, GNAT family; N-acetyltransferase GCN5 4409217 5295005 Cbei_3844 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001310915.1 4408747 R 290402 CDS YP_001310916.1 150018662 5295006 complement(4409315..4409983) 1 NC_009617.1 hypothetical protein 4409983 5295006 Cbei_3845 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310916.1 4409315 R 290402 CDS YP_001310917.1 150018663 5295007 complement(4410223..4410723) 1 NC_009617.1 hypothetical protein 4410723 5295007 Cbei_3846 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310917.1 4410223 R 290402 CDS YP_001310918.1 150018664 5295008 complement(4411343..4412200) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; transcription activator, effector binding; KEGG: ctc:CTC00639 transcriptional regulatory protein; transcription activator, effector binding 4412200 5295008 Cbei_3847 Clostridium beijerinckii NCIMB 8052 transcription activator, effector binding YP_001310918.1 4411343 R 290402 CDS YP_001310919.1 150018665 5295009 complement(4412307..4413326) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: cpe:CPE0841 two-component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 4413326 5295009 Cbei_3848 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001310919.1 4412307 R 290402 CDS YP_001310920.1 150018666 5295010 complement(4413323..4413994) 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cpf:CPF_0836 DNA-binding response regulator; two component transcriptional regulator 4413994 5295010 Cbei_3849 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001310920.1 4413323 R 290402 CDS YP_001310921.1 150018667 5295011 complement(4414121..4414834) 1 NC_009617.1 KEGG: mba:Mbar_A3209 hypothetical protein; hypothetical protein 4414834 5295011 Cbei_3850 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310921.1 4414121 R 290402 CDS YP_001310922.1 150018668 5295012 complement(4414824..4417022) 1 NC_009617.1 KEGG: mba:Mbar_A3210 hypothetical protein; hypothetical protein 4417022 5295012 Cbei_3851 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310922.1 4414824 R 290402 CDS YP_001310923.1 150018669 5295013 complement(4417025..4417888) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mba:Mbar_A3211 ABC transporter ATP-binding protein; ABC transporter 4417888 5295013 Cbei_3852 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001310923.1 4417025 R 290402 CDS YP_001310924.1 150018670 5295014 complement(4417917..4419908) 1 NC_009617.1 PFAM: protein of unknown function DUF214; KEGG: cpe:CPE0851 probable ABC transporter; hypothetical protein 4419908 5295014 Cbei_3853 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310924.1 4417917 R 290402 CDS YP_001310925.1 150018671 5295015 complement(4420137..4422383) 1 NC_009617.1 KEGG: mba:Mbar_A3210 hypothetical protein; hypothetical protein 4422383 5295015 Cbei_3854 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310925.1 4420137 R 290402 CDS YP_001310926.1 150018672 5295016 complement(4422410..4424404) 1 NC_009617.1 PFAM: protein of unknown function DUF214; KEGG: cpe:CPE0851 probable ABC transporter; hypothetical protein 4424404 5295016 Cbei_3855 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310926.1 4422410 R 290402 CDS YP_001310927.1 150018673 5295017 complement(4424391..4425158) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_0841 ABC transporter ATP-binding protein; ABC transporter 4425158 5295017 Cbei_3856 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001310927.1 4424391 R 290402 CDS YP_001310928.1 150018674 5295018 complement(4425591..4426568) 1 NC_009617.1 PFAM: alpha/beta hydrolase fold; KEGG: atc:AGR_C_3327A hypothetical protein; alpha/beta fold family hydrolase 4426568 5295018 Cbei_3857 Clostridium beijerinckii NCIMB 8052 alpha/beta fold family hydrolase YP_001310928.1 4425591 R 290402 CDS YP_001310929.1 150018675 5295019 4426976..4427572 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: bcl:ABC0634 transcriptional regulator, TetR family; TetR family transcriptional regulator 4427572 5295019 Cbei_3858 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001310929.1 4426976 D 290402 CDS YP_001310930.1 150018676 5295020 complement(4428033..4430576) 1 NC_009617.1 PFAM: pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising protein, mobile region; KEGG: tde:TDE0349 phosphoenolpyruvate synthase; pyruvate phosphate dikinase 4430576 5295020 Cbei_3859 Clostridium beijerinckii NCIMB 8052 pyruvate phosphate dikinase YP_001310930.1 4428033 R 290402 CDS YP_001310931.1 150018677 5295021 complement(4430857..4431309) 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: lmo:lmo0989 hypothetical protein; MarR family transcriptional regulator 4431309 5295021 Cbei_3860 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001310931.1 4430857 R 290402 CDS YP_001310932.1 150018678 5295022 4431780..4432403 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: dsy:DSY3670 hypothetical protein; TetR family transcriptional regulator 4432403 5295022 Cbei_3861 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001310932.1 4431780 D 290402 CDS YP_001310933.1 150018679 5295023 4432432..4434789 1 NC_009617.1 PFAM: pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising protein, mobile region; KEGG: hch:HCH_06026 phosphoenolpyruvate synthase/pyruvate phosphate dikinase; pyruvate phosphate dikinase 4434789 5295023 Cbei_3862 Clostridium beijerinckii NCIMB 8052 pyruvate phosphate dikinase YP_001310933.1 4432432 D 290402 CDS YP_001310934.1 150018680 5295024 4434976..4435437 1 NC_009617.1 PFAM: regulatory protein, MerR; KEGG: bcl:ABC1108 hypothetical protein; MerR family transcriptional regulator 4435437 5295024 Cbei_3863 Clostridium beijerinckii NCIMB 8052 MerR family transcriptional regulator YP_001310934.1 4434976 D 290402 CDS YP_001310935.1 150018681 5295025 4435544..4436509 1 NC_009617.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gfo:orf2067 zinc-type alcohol dehydrogenase; alcohol dehydrogenase 4436509 5295025 Cbei_3864 Clostridium beijerinckii NCIMB 8052 alcohol dehydrogenase YP_001310935.1 4435544 D 290402 CDS YP_001310936.1 150018682 5295026 complement(4436837..4437712) 1 NC_009617.1 PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: bsu:BG10570 similar to transcriptional regulator (LysR family); LysR family transcriptional regulator 4437712 5295026 Cbei_3865 Clostridium beijerinckii NCIMB 8052 LysR family transcriptional regulator YP_001310936.1 4436837 R 290402 CDS YP_001310937.1 150018683 5295027 4437983..4439137 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: cac:CAC2253 membrane-associated sensory histidine kinase-like ATPase; integral membrane sensor signal transduction histidine kinase 4439137 5295027 Cbei_3866 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001310937.1 4437983 D 290402 CDS YP_001310938.1 150018684 5295028 4439162..4439821 1 NC_009617.1 PFAM: LuxR family transcriptional regulator; response regulator receiver; KEGG: cac:CAC0174 response regulator, CheY-like receiver domain and HTH DNA-binding domain; two component LuxR family transcriptional regulator 4439821 5295028 Cbei_3867 Clostridium beijerinckii NCIMB 8052 two component LuxR family transcriptional regulator YP_001310938.1 4439162 D 290402 CDS YP_001310939.1 150018685 5295029 complement(4440273..4444379) 1 NC_009617.1 PFAM: glycoside hydrolase, family 3 domain protein; cell wall binding repeat-containing protein; KEGG: tma:TM0025 beta-glucosidase; glycoside hydrolase family protein 4444379 5295029 Cbei_3868 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase family protein YP_001310939.1 4440273 R 290402 CDS YP_001310940.1 150018686 5296429 complement(4445651..4450141) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; sugar-binding domain protein; Glycosyl hydrolase family 32, N terminal domain protein; Glycosyl hydrolase family 32, C-terminal domain protein; SMART: glycoside hydrolase, family 32; KEGG: ssa:SSA_2023 fructan beta-fructosidase precursor; glycosyl hydrolase family 32 protein 4450141 5296429 Cbei_3870 Clostridium beijerinckii NCIMB 8052 glycosyl hydrolase family 32 protein YP_001310940.1 4445651 R 290402 CDS YP_001310941.1 150018687 5295031 complement(4450461..4451282) 1 NC_009617.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: msu:MS2377 PTS system, mannose-specific IID component; PTS system mannose/fructose/sorbose family transporter subunit IID 4451282 5295031 Cbei_3871 Clostridium beijerinckii NCIMB 8052 PTS system mannose/fructose/sorbose family transporter subunit IID YP_001310941.1 4450461 R 290402 CDS YP_001310942.1 150018688 5295032 complement(4451304..4452095) 1 NC_009617.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS, sorbose-specific IIC subunit; KEGG: msu:MS2378 PTS system, mannose-specific IIC component; PTS system mannose/fructose/sorbose family transporter subunit IIC 4452095 5295032 Cbei_3872 Clostridium beijerinckii NCIMB 8052 PTS system mannose/fructose/sorbose family transporter subunit IIC YP_001310942.1 4451304 R 290402 CDS YP_001310943.1 150018689 5295033 complement(4452148..4452639) 1 NC_009617.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; PFAM: PTS system sorbose subfamily IIB component; KEGG: yps:YPTB1634 PTS system, mannose-specific IIAB component; PTS system mannose/fructose/sorbose family transporter subunit IIB 4452639 5295033 Cbei_3873 Clostridium beijerinckii NCIMB 8052 PTS system mannose/fructose/sorbose family transporter subunit IIB YP_001310943.1 4452148 R 290402 CDS YP_001310944.1 150018690 5295034 complement(4452809..4453231) 1 NC_009617.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA subunit; PFAM: PTS system fructose subfamily IIA component; KEGG: lin:lin0777 similar to mannose-specific phosphotransferase system (PTS) component IIA; PTS system mannose/fructose/sorbose family transporter subunit IIA 4453231 5295034 Cbei_3874 Clostridium beijerinckii NCIMB 8052 PTS system mannose/fructose/sorbose family transporter subunit IIA YP_001310944.1 4452809 R 290402 CDS YP_001310945.1 150018691 5295035 complement(4453694..4456489) 1 NC_009617.1 PFAM: sigma-54 factor, interaction domain-containing protein; PTS system fructose subfamily IIA component; PRD domain protein; SMART: ATPase AAA; KEGG: lwe:lwe0744 transcriptional regulator LevR family; sigma-54 factor interaction domain-containing protein 4456489 5295035 Cbei_3875 Clostridium beijerinckii NCIMB 8052 sigma-54 factor interaction domain-containing protein YP_001310945.1 4453694 R 290402 CDS YP_001310946.1 150018692 5295036 complement(4456907..4457854) 1 NC_009617.1 PFAM: PfkB domain protein; KEGG: cpf:CPF_1782 fructokinase; ribokinase-like domain-containing protein 4457854 5295036 Cbei_3876 Clostridium beijerinckii NCIMB 8052 ribokinase-like domain-containing protein YP_001310946.1 4456907 R 290402 CDS YP_001310947.1 150018693 5295037 complement(4458015..4459502) 1 NC_009617.1 KEGG: bld:BLi04178 hypothetical protein; TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32, N terminal domain protein; Glycosyl hydrolase family 32, C-terminal domain protein; SMART: glycoside hydrolase, family 32; sucrose-6-phosphate hydrolase 4459502 5295037 Cbei_3877 Clostridium beijerinckii NCIMB 8052 sucrose-6-phosphate hydrolase YP_001310947.1 4458015 R 290402 CDS YP_001310948.1 150018694 5295038 complement(4459569..4461185) 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 1; KEGG: spn:SP_1796 ABC transporter substrate-binding protein; extracellular solute-binding protein 4461185 5295038 Cbei_3878 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001310948.1 4459569 R 290402 CDS YP_001310949.1 150018695 5295039 complement(4461220..4462122) 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spn:SP_1797 ABC transporter permease; binding-protein-dependent transport system inner membrane protein 4462122 5295039 Cbei_3879 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001310949.1 4461220 R 290402 CDS YP_001310950.1 150018696 5295040 complement(4462124..4463116) 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spn:SP_1798 ABC transporter permease; binding-protein-dependent transport system inner membrane protein 4463116 5295040 Cbei_3880 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001310950.1 4462124 R 290402 CDS YP_001310951.1 150018697 5295041 4463452..4464516 1 NC_009617.1 PFAM: LacI family transcriptional regulator; KEGG: gka:GK3275 transcriptional regulator (LacI family); LacI family transcriptional regulator 4464516 5295041 Cbei_3881 Clostridium beijerinckii NCIMB 8052 LacI family transcriptional regulator YP_001310951.1 4463452 D 290402 CDS YP_001310952.1 150018698 5295042 complement(4464655..4466007) 1 NC_009617.1 KEGG: pfa:MAL8P1.12 hypothetical protein; hypothetical protein 4466007 5295042 Cbei_3882 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310952.1 4464655 R 290402 CDS YP_001310953.1 150018699 5295043 complement(4466026..4467228) 1 NC_009617.1 KEGG: swo:Swol_0181 ABC-type multidrug transport system permease component; multidrug ABC transporter permease 4467228 5295043 Cbei_3883 Clostridium beijerinckii NCIMB 8052 multidrug ABC transporter permease YP_001310953.1 4466026 R 290402 CDS YP_001310954.1 150018700 5295044 complement(4467203..4468393) 1 NC_009617.1 KEGG: swo:Swol_2449 ABC-type multidrug transport system permease component; multidrug ABC transporter permease 4468393 5295044 Cbei_3884 Clostridium beijerinckii NCIMB 8052 multidrug ABC transporter permease YP_001310954.1 4467203 R 290402 CDS YP_001310955.1 150018701 5295045 complement(4468407..4469456) 1 NC_009617.1 PFAM: secretion protein HlyD family protein; KEGG: pgi:PG0093 HlyD family secretion protein; secretion protein HlyD family protein 4469456 5295045 Cbei_3885 Clostridium beijerinckii NCIMB 8052 secretion protein HlyD family protein YP_001310955.1 4468407 R 290402 CDS YP_001310956.1 150018702 5295046 4469706..4470263 1 NC_009617.1 KEGG: bld:BLi00563 TetR; TetR family transcriptional regulator 4470263 5295046 Cbei_3886 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001310956.1 4469706 D 290402 CDS YP_001310957.1 150018703 5295047 complement(4470537..4471649) 1 NC_009617.1 PFAM: protein of unknown function DUF1349; KEGG: btk:BT9727_2931 hypothetical protein; hypothetical protein 4471649 5295047 Cbei_3887 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310957.1 4470537 R 290402 CDS YP_001310958.1 150018704 5295048 complement(4471875..4473071) 1 NC_009617.1 PFAM: major facilitator superfamily MFS_1; KEGG: cth:Cthe_2967 major facilitator superfamily MFS_1; major facilitator superfamily transporter 4473071 5295048 Cbei_3888 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001310958.1 4471875 R 290402 CDS YP_001310959.1 150018705 5295049 complement(4473183..4473824) 1 NC_009617.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: plu:plu0475 hypothetical protein; HAD family hydrolase 4473824 5295049 Cbei_3889 Clostridium beijerinckii NCIMB 8052 HAD family hydrolase YP_001310959.1 4473183 R 290402 CDS YP_001310960.1 150018706 5295050 complement(4473840..4474889) 1 NC_009617.1 PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: plu:plu0474 hypothetical protein; alcohol dehydrogenase 4474889 5295050 Cbei_3890 Clostridium beijerinckii NCIMB 8052 alcohol dehydrogenase YP_001310960.1 4473840 R 290402 CDS YP_001310961.1 150018707 5295051 complement(4474877..4476154) 1 NC_009617.1 PFAM: aminotransferase class-III; KEGG: plu:plu0473 hypothetical protein; class III aminotransferase 4476154 5295051 Cbei_3891 Clostridium beijerinckii NCIMB 8052 class III aminotransferase YP_001310961.1 4474877 R 290402 CDS YP_001310962.1 150018708 5295052 4476759..4477172 1 NC_009617.1 KEGG: ssa:SSA_0360 conserved uncharacterized protein; hypothetical protein 4477172 5295052 Cbei_3892 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310962.1 4476759 D 290402 CDS YP_001310963.1 150018709 5295053 4477174..4477617 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: ssa:SSA_0255 multiple antibiotic resistance operon transcription repressor (MarR); MarR family transcriptional regulator 4477617 5295053 Cbei_3893 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001310963.1 4477174 D 290402 CDS YP_001310964.1 150018710 5295054 complement(4477850..4478404) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ddi:DDBDRAFT_0206477 hypothetical protein; N-acetyltransferase GCN5 4478404 5295054 Cbei_3894 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001310964.1 4477850 R 290402 CDS YP_001310965.1 150018711 5295055 complement(4478488..4479294) 1 NC_009617.1 PFAM: NADPH-dependent FMN reductase; KEGG: mst:Msp_1469 predicted iron-sulfur flavoprotein; NADPH-dependent FMN reductase 4479294 5295055 Cbei_3895 Clostridium beijerinckii NCIMB 8052 NADPH-dependent FMN reductase YP_001310965.1 4478488 R 290402 CDS YP_001310966.1 150018712 5295056 complement(4479373..4480080) 1 NC_009617.1 PFAM: transcriptional regulator PadR family protein; KEGG: cac:CAC0832 fusion: transcriptional regulator and conserved domain; PadR-like family transcriptional regulator 4480080 5295056 Cbei_3896 Clostridium beijerinckii NCIMB 8052 PadR-like family transcriptional regulator YP_001310966.1 4479373 R 290402 CDS YP_001310967.1 150018713 5295057 complement(4480200..4480745) 1 NC_009617.1 hypothetical protein 4480745 5295057 Cbei_3897 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310967.1 4480200 R 290402 CDS YP_001310968.1 150018714 5295058 complement(4480898..4481734) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; transcription activator, effector binding; KEGG: btl:BALH_2732 transcriptional regulator, AraC family; transcription activator, effector binding 4481734 5295058 Cbei_3898 Clostridium beijerinckii NCIMB 8052 transcription activator, effector binding YP_001310968.1 4480898 R 290402 CDS YP_001310969.1 150018715 5295059 complement(4482048..4483139) 1 NC_009617.1 KEGG: ctc:CTC01816 hypothetical protein; hypothetical protein 4483139 5295059 Cbei_3899 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310969.1 4482048 R 290402 CDS YP_001310970.1 150018716 5295060 complement(4483153..4483686) 1 NC_009617.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: cac:CAC1766 RNA polymerase sigma-70 factor; ECF subfamily RNA polymerase sigma-24 factor 4483686 5295060 Cbei_3900 Clostridium beijerinckii NCIMB 8052 ECF subfamily RNA polymerase sigma-24 factor YP_001310970.1 4483153 R 290402 CDS YP_001310971.1 150018717 5295061 complement(4484127..4484990) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: btl:BALH_1852 acetyltransferase, GNAT family; N-acetyltransferase GCN5 4484990 5295061 Cbei_3901 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001310971.1 4484127 R 290402 CDS YP_001310972.1 150018718 5295062 complement(4485003..4485767) 1 NC_009617.1 PFAM: LuxR family transcriptional regulator; KEGG: cac:CAC0445 protein, containing LuxR family transcriptional regulator HTH domain; LuxR family transcriptional regulator 4485767 5295062 Cbei_3902 Clostridium beijerinckii NCIMB 8052 LuxR family transcriptional regulator YP_001310972.1 4485003 R 290402 CDS YP_001310973.1 150018719 5295063 complement(4486238..4487173) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; AraC-type transcriptional regulator domain protein; KEGG: pau:PA14_38040 transcriptional regulator, AraC family; AraC family transcriptional regulator 4487173 5295063 Cbei_3903 Clostridium beijerinckii NCIMB 8052 AraC family transcriptional regulator YP_001310973.1 4486238 R 290402 CDS YP_001310974.1 150018720 5295064 4487379..4488119 1 NC_009617.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: nmu:Nmul_A1378 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4488119 5295064 Cbei_3904 Clostridium beijerinckii NCIMB 8052 short-chain dehydrogenase/reductase SDR YP_001310974.1 4487379 D 290402 CDS YP_001310975.1 150018721 5296430 complement(4488784..4489323) 1 NC_009617.1 PFAM: nitroreductase; KEGG: cac:CAC1418 nitroreductase; nitroreductase 4489323 5296430 Cbei_3906 Clostridium beijerinckii NCIMB 8052 nitroreductase YP_001310975.1 4488784 R 290402 CDS YP_001310976.1 150018722 5295066 complement(4489431..4489925) 1 NC_009617.1 KEGG: ooe:OEOE_0717 acetyltransferase, including N-acetylase of ribosomal protein; ribosomal protein N-acetylase 4489925 5295066 Cbei_3907 Clostridium beijerinckii NCIMB 8052 ribosomal protein N-acetylase YP_001310976.1 4489431 R 290402 CDS YP_001310977.1 150018723 5296431 complement(4490182..4490781) 1 NC_009617.1 KEGG: lpl:lp_1933 galactoside O-acetyltransferase; galactoside O-acetyltransferase 4490781 5296431 Cbei_3909 Clostridium beijerinckii NCIMB 8052 galactoside O-acetyltransferase YP_001310977.1 4490182 R 290402 CDS YP_001310978.1 150018724 5295068 complement(4490869..4491579) 1 NC_009617.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: lpl:lp_1934 transcription regulator; RpiR family transcriptional regulator 4491579 5295068 Cbei_3910 Clostridium beijerinckii NCIMB 8052 RpiR family transcriptional regulator YP_001310978.1 4490869 R 290402 CDS YP_001310979.1 150018725 5295069 complement(4491669..4492286) 1 NC_009617.1 hypothetical protein 4492286 5295069 Cbei_3911 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310979.1 4491669 R 290402 CDS YP_001310980.1 150018726 5295070 complement(4492487..4493005) 1 NC_009617.1 PFAM: VanZ family protein; KEGG: ctc:CTC01412 hypothetical protein; VanZ family protein 4493005 5295070 Cbei_3912 Clostridium beijerinckii NCIMB 8052 VanZ family protein YP_001310980.1 4492487 R 290402 CDS YP_001310981.1 150018727 5295071 complement(4493435..4494151) 1 NC_009617.1 PFAM: pentapeptide repeat protein; KEGG: fal:FRAAL2569 hypothetical protein; pentapeptide repeat-containing protein 4494151 5295071 Cbei_3913 Clostridium beijerinckii NCIMB 8052 pentapeptide repeat-containing protein YP_001310981.1 4493435 R 290402 CDS YP_001310982.1 150018728 5295072 complement(4494166..4494495) 1 NC_009617.1 PFAM: transcriptional regulator PadR family protein; KEGG: fal:FRAAL2570 PadR family transcriptional regulator; PadR-like family transcriptional regulator 4494495 5295072 Cbei_3914 Clostridium beijerinckii NCIMB 8052 PadR-like family transcriptional regulator YP_001310982.1 4494166 R 290402 CDS YP_001310983.1 150018729 5295073 4494974..4495396 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: eba:ebA3908 transcriptional regulator, MarR family; MarR family transcriptional regulator 4495396 5295073 Cbei_3915 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001310983.1 4494974 D 290402 CDS YP_001310984.1 150018730 5295074 4495400..4496602 1 NC_009617.1 PFAM: major facilitator superfamily MFS_1; KEGG: ssp:SSP2167 permease of the major facilitator superfamily; major facilitator superfamily transporter 4496602 5295074 Cbei_3916 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001310984.1 4495400 D 290402 CDS YP_001310985.1 150018731 5295075 complement(4496856..4497116) 1 NC_009617.1 hypothetical protein 4497116 5295075 Cbei_3917 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310985.1 4496856 R 290402 CDS YP_001310986.1 150018732 5295076 complement(4497441..4498124) 1 NC_009617.1 PFAM: lipolytic protein, G-D-S-L family; KEGG: bld:BLi04100 hypothetical protein; GDSL family lipase 4498124 5295076 Cbei_3918 Clostridium beijerinckii NCIMB 8052 GDSL family lipase YP_001310986.1 4497441 R 290402 CDS YP_001310987.1 150018733 5295077 complement(4498180..4498470) 1 NC_009617.1 hypothetical protein 4498470 5295077 Cbei_3919 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310987.1 4498180 R 290402 CDS YP_001310988.1 150018734 5295078 complement(4499140..4500192) 1 NC_009617.1 KEGG: ter:Tery_0801 galactoside ABC transporter; galactoside ABC transporter 4500192 5295078 Cbei_3920 Clostridium beijerinckii NCIMB 8052 galactoside ABC transporter YP_001310988.1 4499140 R 290402 CDS YP_001310989.1 150018735 5295079 complement(4500465..4500995) 1 NC_009617.1 hypothetical protein 4500995 5295079 Cbei_3921 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310989.1 4500465 R 290402 CDS YP_001310990.1 150018736 5295080 complement(4502003..4502716) 1 NC_009617.1 PFAM: Phosphoglycerate mutase; KEGG: cac:CAC0167 possible sigma factor, diverged member of sigF/sigE/sigG family; phosphoglycerate mutase 4502716 5295080 Cbei_3922 Clostridium beijerinckii NCIMB 8052 phosphoglycerate mutase YP_001310990.1 4502003 R 290402 CDS YP_001310991.1 150018737 5295081 complement(4503299..4504564) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: cpf:CPF_0863 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 4504564 5295081 Cbei_3923 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001310991.1 4503299 R 290402 CDS YP_001310992.1 150018738 5295082 complement(4505162..4505515) 1 NC_009617.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cac:CAC3356 lactoylglutathione lyase (LGUL) family protein, diverged; glyoxalase/bleomycin resistance protein/dioxygenase 4505515 5295082 Cbei_3924 Clostridium beijerinckii NCIMB 8052 glyoxalase/bleomycin resistance protein/dioxygenase YP_001310992.1 4505162 R 290402 CDS YP_001310993.1 150018739 5295083 complement(4505542..4506189) 1 NC_009617.1 PFAM: cyclase family protein; KEGG: ctc:CTC01833 hypothetical protein; cyclase family protein 4506189 5295083 Cbei_3925 Clostridium beijerinckii NCIMB 8052 cyclase family protein YP_001310993.1 4505542 R 290402 CDS YP_001310994.1 150018740 5296433 complement(4507476..4508018) 1 NC_009617.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; KEGG: cpr:CPR_0564 signal peptidase I; signal peptidase I 4508018 5296433 Cbei_3928 Clostridium beijerinckii NCIMB 8052 signal peptidase I YP_001310994.1 4507476 R 290402 CDS YP_001310995.1 150018741 5295085 complement(4508209..4508709) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bha:BH0433 phosphinothricin N-acetyltransferase; N-acetyltransferase GCN5 4508709 5295085 Cbei_3929 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001310995.1 4508209 R 290402 CDS YP_001310996.1 150018742 5295086 complement(4509532..4509807) 1 NC_009617.1 hypothetical protein 4509807 5295086 Cbei_3930 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310996.1 4509532 R 290402 CDS YP_001310997.1 150018743 5295087 complement(4510181..4512943) 1 NC_009617.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: cth:Cthe_0511 histidine kinase; PAS/PAC sensor signal transduction histidine kinase 4512943 5295087 Cbei_3931 Clostridium beijerinckii NCIMB 8052 PAS/PAC sensor signal transduction histidine kinase YP_001310997.1 4510181 R 290402 CDS YP_001310998.1 150018744 5295088 complement(4513339..4514151) 1 NC_009617.1 PFAM: alpha/beta hydrolase fold; KEGG: ctc:CTC01150 non-heme chloroperoxidase; alpha/beta fold family hydrolase 4514151 5295088 Cbei_3932 Clostridium beijerinckii NCIMB 8052 alpha/beta fold family hydrolase YP_001310998.1 4513339 R 290402 CDS YP_001310999.1 150018745 5295089 complement(4514225..4514608) 1 NC_009617.1 hypothetical protein 4514608 5295089 Cbei_3933 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001310999.1 4514225 R 290402 CDS YP_001311000.1 150018746 5295090 4514956..4515276 1 NC_009617.1 hypothetical protein 4515276 5295090 Cbei_3934 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311000.1 4514956 D 290402 CDS YP_001311001.1 150018747 5295091 4515670..4516716 1 NC_009617.1 KEGG: cpe:CPE1341 probable galactoside ABC transporter; galactoside ABC transporter 4516716 5295091 Cbei_3935 Clostridium beijerinckii NCIMB 8052 galactoside ABC transporter YP_001311001.1 4515670 D 290402 CDS YP_001311002.1 150018748 5295092 complement(4517231..4518013) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: dsy:DSY2648 hypothetical protein; cell wall binding repeat-containing protein 4518013 5295092 Cbei_3936 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311002.1 4517231 R 290402 CDS YP_001311003.1 150018749 5295093 complement(4518313..4518741) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC1468 predicted acetyltransferase; N-acetyltransferase GCN5 4518741 5295093 Cbei_3937 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001311003.1 4518313 R 290402 CDS YP_001311004.1 150018750 5295094 complement(4518875..4519165) 1 NC_009617.1 hypothetical protein 4519165 5295094 Cbei_3938 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311004.1 4518875 R 290402 CDS YP_001311005.1 150018751 5295095 complement(4520038..4521084) 1 NC_009617.1 KEGG: ctc:CTC00860 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein 4521084 5295095 Cbei_3939 Clostridium beijerinckii NCIMB 8052 D-galactose-binding periplasmic protein YP_001311005.1 4520038 R 290402 CDS YP_001311006.1 150018752 5295096 complement(4521248..4521697) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC2539 predicted acetyltransferase; N-acetyltransferase GCN5 4521697 5295096 Cbei_3940 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001311006.1 4521248 R 290402 CDS YP_001311007.1 150018753 5295097 4521787..4522263 1 NC_009617.1 hypothetical protein 4522263 5295097 Cbei_3941 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311007.1 4521787 D 290402 CDS YP_001311008.1 150018754 5295098 complement(4522293..4522847) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bat:BAS2577 acetyltransferase, GNAT family; N-acetyltransferase GCN5 4522847 5295098 Cbei_3942 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001311008.1 4522293 R 290402 CDS YP_001311009.1 150018755 5295099 complement(4522960..4523403) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC3445 predicted acetyltransferase; N-acetyltransferase GCN5 4523403 5295099 Cbei_3943 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001311009.1 4522960 R 290402 CDS YP_001311010.1 150018756 5295100 4523836..4524153 1 NC_009617.1 hypothetical protein 4524153 5295100 Cbei_3944 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311010.1 4523836 D 290402 CDS YP_001311011.1 150018757 5295101 complement(4524364..4525086) 1 NC_009617.1 PFAM: metallophosphoesterase; KEGG: bha:BH1859 hypothetical protein; metallophosphoesterase 4525086 5295101 Cbei_3945 Clostridium beijerinckii NCIMB 8052 metallophosphoesterase YP_001311011.1 4524364 R 290402 CDS YP_001311012.1 150018758 5295102 complement(4525426..4525674) 1 NC_009617.1 hypothetical protein 4525674 5295102 Cbei_3946 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311012.1 4525426 R 290402 CDS YP_001311013.1 150018759 5295103 complement(4526681..4527037) 1 NC_009617.1 PFAM: helix-turn-helix, HxlR type; KEGG: cac:CAC2934 predicted transcriptional regulator; HxlR family transcriptional regulator 4527037 5295103 Cbei_3947 Clostridium beijerinckii NCIMB 8052 HxlR family transcriptional regulator YP_001311013.1 4526681 R 290402 CDS YP_001311014.1 150018760 5295104 4527199..4528014 1 NC_009617.1 PFAM: nitroreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cac:CAC2933 ferredoxin-like domain fused to nitroreductase-like domain; nitroreductase 4528014 5295104 Cbei_3948 Clostridium beijerinckii NCIMB 8052 nitroreductase YP_001311014.1 4527199 D 290402 CDS YP_001311015.1 150018761 5295105 4528594..4528917 1 NC_009617.1 hypothetical protein 4528917 5295105 Cbei_3949 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311015.1 4528594 D 290402 CDS YP_001311016.1 150018762 5295106 complement(4529121..4529333) 1 NC_009617.1 PFAM: LexA DNA-binding domain protein; KEGG: bha:BH2356 transcriptional repressor of the SOS regulon; LexA family transcriptional regulator 4529333 5295106 Cbei_3950 Clostridium beijerinckii NCIMB 8052 LexA family transcriptional regulator YP_001311016.1 4529121 R 290402 CDS YP_001311017.1 150018763 5295107 complement(4529596..4530453) 1 NC_009617.1 PFAM: protein of unknown function DUF161; KEGG: cac:CAC1325 uncharacterized conserved protein, YitT (B.subtilis) family; hypothetical protein 4530453 5295107 Cbei_3951 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311017.1 4529596 R 290402 CDS YP_001311018.1 150018764 5295108 complement(4530638..4531369) 1 NC_009617.1 PFAM: protein of unknown function DUF81; KEGG: dar:Daro_3914 protein of unknown function DUF81; hypothetical protein 4531369 5295108 Cbei_3952 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311018.1 4530638 R 290402 CDS YP_001311019.1 150018765 5295109 complement(4531530..4533245) 1 NC_009617.1 PFAM: chemotaxis sensory transducer; KEGG: cac:CAC2803 membrane associated methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4533245 5295109 Cbei_3953 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001311019.1 4531530 R 290402 CDS YP_001311020.1 150018766 5295110 complement(4533223..4533669) 1 NC_009617.1 PFAM: CheW domain protein; KEGG: pca:Pcar_0546 CheW protein; CheW protein 4533669 5295110 Cbei_3954 Clostridium beijerinckii NCIMB 8052 CheW protein YP_001311020.1 4533223 R 290402 CDS YP_001311021.1 150018767 5295111 4533849..4534160 1 NC_009617.1 hypothetical protein 4534160 5295111 Cbei_3955 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311021.1 4533849 D 290402 CDS YP_001311022.1 150018768 5295112 4534211..4534528 1 NC_009617.1 hypothetical protein 4534528 5295112 Cbei_3956 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311022.1 4534211 D 290402 CDS YP_001311023.1 150018769 5295113 complement(4534803..4535195) 1 NC_009617.1 KEGG: cpf:CPF_1072 hypothetical protein; hypothetical protein 4535195 5295113 Cbei_3957 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311023.1 4534803 R 290402 CDS YP_001311024.1 150018770 5295114 complement(4535484..4536281) 1 NC_009617.1 KEGG: cac:CAC0070 hypothetical protein; hypothetical protein 4536281 5295114 Cbei_3958 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311024.1 4535484 R 290402 CDS YP_001311025.1 150018771 5295115 4536455..4536808 1 NC_009617.1 PFAM: helix-turn-helix domain protein; KEGG: cno:NT01CX_2201 transcriptional regulator; XRE family transcriptional regulator 4536808 5295115 Cbei_3959 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001311025.1 4536455 D 290402 CDS YP_001311026.1 150018772 5295116 4536789..4537448 1 NC_009617.1 PFAM: protein of unknown function DUF955; KEGG: cno:NT01CX_2202 hypothetical protein; hypothetical protein 4537448 5295116 Cbei_3960 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311026.1 4536789 D 290402 CDS YP_001311027.1 150018773 5295117 complement(4537695..4539665) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY4790 hypothetical protein; methyl-accepting chemotaxis sensory transducer 4539665 5295117 Cbei_3961 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001311027.1 4537695 R 290402 CDS YP_001311028.1 150018774 5295118 complement(4539930..4541453) 1 NC_009617.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; proteinase inhibitor I9, subtilisin propeptide; KEGG: bsu:BG10561 minor extracellular serine protease; peptidase S8/S53 subtilisin kexin sedolisin 4541453 5295118 Cbei_3962 Clostridium beijerinckii NCIMB 8052 peptidase S8/S53 subtilisin kexin sedolisin YP_001311028.1 4539930 R 290402 CDS YP_001311029.1 150018775 5295119 complement(4542233..4542475) 1 NC_009617.1 hypothetical protein 4542475 5295119 Cbei_3963 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311029.1 4542233 R 290402 CDS YP_001311030.1 150018776 5296436 complement(4548650..4549585) 1 NC_009617.1 PFAM: CHAP domain containing protein; SMART: SH3 domain protein domain protein; KEGG: cpr:CPR_B0001 bacteriocin; CHAP domain-containing protein 4549585 5296436 Cbei_3964 Clostridium beijerinckii NCIMB 8052 CHAP domain-containing protein YP_001311030.1 4548650 R 290402 CDS YP_001311031.1 150018777 5295121 4549882..4550484 1 NC_009617.1 PFAM: Accessory gene regulator B; KEGG: cno:NT01CX_2060 AgrB-like protein; accessory gene regulator B 4550484 5295121 Cbei_3965 Clostridium beijerinckii NCIMB 8052 accessory gene regulator B YP_001311031.1 4549882 D 290402 CDS YP_001311032.1 150018778 5295122 complement(4550539..4551789) 1 NC_009617.1 SMART: ATP-binding region, ATPase domain protein domain protein; KEGG: cno:NT01CX_2062 accessory gene regulator protein C; signal transduction histidine kinase regulating citrate/malate metabolism 4551789 5295122 Cbei_3966 Clostridium beijerinckii NCIMB 8052 signal transduction histidine kinase regulating citrate/malate metabolism YP_001311032.1 4550539 R 290402 CDS YP_001311033.1 150018779 5295123 complement(4551783..4552550) 1 NC_009617.1 PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: sao:SAOUHSC_00231 two-component response regulator; LytTR family two component transcriptional regulator 4552550 5295123 Cbei_3967 Clostridium beijerinckii NCIMB 8052 LytTR family two component transcriptional regulator YP_001311033.1 4551783 R 290402 CDS YP_001311034.1 150018780 5295124 complement(4552877..4554067) 1 NC_009617.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: cth:Cthe_1383 tetratricopeptide TPR_2; hypothetical protein 4554067 5295124 Cbei_3968 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311034.1 4552877 R 290402 CDS YP_001311035.1 150018781 5295125 complement(4554350..4555723) 1 NC_009617.1 PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: cpe:CPE0406 probable reticuline oxidase; FAD linked oxidase domain-containing protein 4555723 5295125 Cbei_3969 Clostridium beijerinckii NCIMB 8052 FAD linked oxidase domain-containing protein YP_001311035.1 4554350 R 290402 CDS YP_001311036.1 150018782 5295126 4555954..4556112 1 NC_009617.1 PFAM: small acid-soluble spore H family protein; small acid-soluble spore H family protein 4556112 5295126 Cbei_3970 Clostridium beijerinckii NCIMB 8052 small acid-soluble spore H family protein YP_001311036.1 4555954 D 290402 CDS YP_001311037.1 150018783 5295127 complement(4556966..4557886) 1 NC_009617.1 KEGG: rso:RSc2523 transmembrane protein; hypothetical protein 4557886 5295127 Cbei_3971 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311037.1 4556966 R 290402 CDS YP_001311038.1 150018784 5295128 complement(4558586..4559980) 1 NC_009617.1 PFAM: amino acid permease-associated region; KEGG: cac:CAC1472 amino acid permease; amino acid permease-associated protein 4559980 5295128 Cbei_3972 Clostridium beijerinckii NCIMB 8052 amino acid permease-associated protein YP_001311038.1 4558586 R 290402 CDS YP_001311039.1 150018785 5295129 complement(4560809..4561234) 1 NC_009617.1 PFAM: regulatory protein, MerR; KEGG: cac:CA_P0178 transcriptional regulator, MerR family; MerR family transcriptional regulator 4561234 5295129 Cbei_3973 Clostridium beijerinckii NCIMB 8052 MerR family transcriptional regulator YP_001311039.1 4560809 R 290402 CDS YP_001311040.1 150018786 5295130 complement(4561348..4562343) 1 NC_009617.1 PFAM: aldo/keto reductase; KEGG: bad:BAD_0873 possible reductase; aldo/keto reductase 4562343 5295130 Cbei_3974 Clostridium beijerinckii NCIMB 8052 aldo/keto reductase YP_001311040.1 4561348 R 290402 CDS YP_001311041.1 150018787 5295131 complement(4562530..4563480) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; SMART: transglutaminase domain protein; KEGG: ctc:CTC00472 transglutaminase-like predicted protease; cell wall binding repeat-containing protein 4563480 5295131 Cbei_3975 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311041.1 4562530 R 290402 CDS YP_001311042.1 150018788 5295132 complement(4563824..4564177) 1 NC_009617.1 hypothetical protein 4564177 5295132 Cbei_3976 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311042.1 4563824 R 290402 CDS YP_001311043.1 150018789 5295133 complement(4564450..4565436) 1 NC_009617.1 TIGRFAM: peptide ABC transporter ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter C-terminal domain protein; SMART: ATPase AAA; KEGG: cac:CAC3635 oligopeptide ABC transporter ATPase component; peptide ABC transporter ATPase 4565436 5295133 Cbei_3977 Clostridium beijerinckii NCIMB 8052 peptide ABC transporter ATPase YP_001311043.1 4564450 R 290402 CDS YP_001311044.1 150018790 5295134 complement(4565429..4566418) 1 NC_009617.1 TIGRFAM: peptide ABC transporter ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter C-terminal domain protein; SMART: ATPase AAA; KEGG: cac:CAC0179 oligopeptide transport ATP-binding protein; peptide ABC transporter ATPase 4566418 5295134 Cbei_3978 Clostridium beijerinckii NCIMB 8052 peptide ABC transporter ATPase YP_001311044.1 4565429 R 290402 CDS YP_001311045.1 150018791 5295135 complement(4566431..4567273) 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH1036 oligopeptide ABC transporter permease; binding-protein-dependent transport system inner membrane protein 4567273 5295135 Cbei_3979 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001311045.1 4566431 R 290402 CDS YP_001311046.1 150018792 5295136 complement(4567286..4568257) 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpf:CPF_2554 oligopeptide/dipeptide ABC transporter permease; binding-protein-dependent transport system inner membrane protein 4568257 5295136 Cbei_3980 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001311046.1 4567286 R 290402 CDS YP_001311047.1 150018793 5295137 complement(4568360..4570036) 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 5; KEGG: cpr:CPR_2258 bacterial extracellular solute-binding proteins, family 5 superfamily; extracellular solute-binding protein 4570036 5295137 Cbei_3981 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001311047.1 4568360 R 290402 CDS YP_001311048.1 150018794 5295138 complement(4570332..4570760) 1 NC_009617.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: cac:CA_P0174 membrane protein; hypothetical protein 4570760 5295138 Cbei_3982 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311048.1 4570332 R 290402 CDS YP_001311049.1 150018795 5295139 complement(4570801..4573152) 1 NC_009617.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cth:Cthe_0511 histidine kinase; PAS/PAC sensor signal transduction histidine kinase 4573152 5295139 Cbei_3983 Clostridium beijerinckii NCIMB 8052 PAS/PAC sensor signal transduction histidine kinase YP_001311049.1 4570801 R 290402 CDS YP_001311050.1 150018796 5295140 complement(4573537..4574970) 1 NC_009617.1 PFAM: glycoside hydrolase, family 1; KEGG: yen:YE1417 6-phospho-beta-glucosidase; glycoside hydrolase 4574970 5295140 Cbei_3984 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001311050.1 4573537 R 290402 CDS YP_001311051.1 150018797 5295141 4575141..4576598 1 NC_009617.1 KEGG: tte:TTE2242 transposase; transposase 4576598 5295141 Cbei_3985 Clostridium beijerinckii NCIMB 8052 transposase YP_001311051.1 4575141 D 290402 CDS YP_001311052.1 150018798 5295142 complement(4577304..4578338) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; SCP-like extracellular; KEGG: sth:STH564 hypothetical protein; SCP-like extracellular protein 4578338 5295142 Cbei_3986 Clostridium beijerinckii NCIMB 8052 SCP-like extracellular protein YP_001311052.1 4577304 R 290402 CDS YP_001311053.1 150018799 5295143 complement(4578866..4579366) 1 NC_009617.1 KEGG: cth:Cthe_1780 hypothetical protein; hypothetical protein 4579366 5295143 Cbei_3987 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311053.1 4578866 R 290402 CDS YP_001311054.1 150018800 5295144 4579733..4580536 1 NC_009617.1 PFAM: Abortive infection protein; KEGG: sdn:Sden_0892 abortive infection protein; abortive infection protein 4580536 5295144 Cbei_3988 Clostridium beijerinckii NCIMB 8052 abortive infection protein YP_001311054.1 4579733 D 290402 CDS YP_001311055.1 150018801 5295145 complement(4580923..4582158) 1 NC_009617.1 PFAM: Beta-ketoacyl synthase-like; KEGG: cth:Cthe_0932 beta-ketoacyl synthase; beta-ketoacyl synthase-like protein 4582158 5295145 Cbei_3989 Clostridium beijerinckii NCIMB 8052 beta-ketoacyl synthase-like protein YP_001311055.1 4580923 R 290402 CDS YP_001311056.1 150018802 5295146 4582462..4583355 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; transcription activator, effector binding; KEGG: bha:BH3506 transcriptional regulator (AraC/XylS family); transcription activator, effector binding 4583355 5295146 Cbei_3990 Clostridium beijerinckii NCIMB 8052 transcription activator, effector binding YP_001311056.1 4582462 D 290402 CDS YP_001311057.1 150018803 5295147 4583465..4584106 1 NC_009617.1 KEGG: fra:Francci3_2694 hypothetical protein; hypothetical protein 4584106 5295147 Cbei_3991 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311057.1 4583465 D 290402 CDS YP_001311058.1 150018804 5295148 complement(4584645..4585937) 1 NC_009617.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: cac:CAC1422 uncharacterized hypothetical protein, YUGS B.subtilis ortholog; hypothetical protein 4585937 5295148 Cbei_3992 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311058.1 4584645 R 290402 CDS YP_001311059.1 150018805 5295149 4586829..4587875 1 NC_009617.1 KEGG: cpr:CPR_1341 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein 4587875 5295149 Cbei_3993 Clostridium beijerinckii NCIMB 8052 D-galactose-binding periplasmic protein YP_001311059.1 4586829 D 290402 CDS YP_001311060.1 150018806 5295150 complement(4587958..4588419) 1 NC_009617.1 KEGG: cpf:CPF_0972 hypothetical protein; hypothetical protein 4588419 5295150 Cbei_3994 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311060.1 4587958 R 290402 CDS YP_001311061.1 150018807 5295151 4588885..4589211 1 NC_009617.1 hypothetical protein 4589211 5295151 Cbei_3995 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311061.1 4588885 D 290402 CDS YP_001311062.1 150018808 5295152 complement(4589240..4589782) 1 NC_009617.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; KEGG: cpf:CPF_0578 signal peptidase I; signal peptidase I 4589782 5295152 Cbei_3996 Clostridium beijerinckii NCIMB 8052 signal peptidase I YP_001311062.1 4589240 R 290402 CDS YP_001311063.1 150018809 5295153 complement(4590064..4590879) 1 NC_009617.1 PFAM: alpha/beta hydrolase fold; KEGG: cac:CAC2688 alpha/beta superfamily hydrolase (possible chloroperoxidase); alpha/beta fold family hydrolase 4590879 5295153 Cbei_3997 Clostridium beijerinckii NCIMB 8052 alpha/beta fold family hydrolase YP_001311063.1 4590064 R 290402 CDS YP_001311064.1 150018810 5295154 complement(4591109..4591969) 1 NC_009617.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: llm:llmg_1124 conserved hypothetical protein; rRNA (guanine-N(1)-)-methyltransferase 4591969 5295154 Cbei_3998 Clostridium beijerinckii NCIMB 8052 rRNA (guanine-N(1)-)-methyltransferase YP_001311064.1 4591109 R 290402 CDS YP_001311065.1 150018811 5295155 complement(4592022..4592810) 1 NC_009617.1 PFAM: protein of unknown function DUF218; KEGG: cpf:CPF_1006 hypothetical protein; hypothetical protein 4592810 5295155 Cbei_3999 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311065.1 4592022 R 290402 CDS YP_001311066.1 150018812 5295156 complement(4593279..4594871) 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; iron hydrogenase, small subunit; hydrogenase large subunit domain protein; KEGG: cpr:CPR_2341 iron hydrogenase; ferredoxin hydrogenase 4594871 5295156 Cbei_4000 Clostridium beijerinckii NCIMB 8052 ferredoxin hydrogenase YP_001311066.1 4593279 R 290402 CDS YP_001311067.1 150018813 5295157 4595101..4595484 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: dsy:DSY0576 hypothetical protein; helix-turn-helix domain-containing protein 4595484 5295157 Cbei_4001 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001311067.1 4595101 D 290402 CDS YP_001311068.1 150018814 5295158 4595521..4596099 1 NC_009617.1 PFAM: peptidase S14, ClpP; KEGG: cac:CAC2640 protease subunits of ATP-dependent protease, ClpP; endopeptidase Clp 4596099 5295158 Cbei_4002 Clostridium beijerinckii NCIMB 8052 endopeptidase Clp YP_001311068.1 4595521 D 290402 CDS YP_001311069.1 150018815 5295159 4596240..4597007 1 NC_009617.1 PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: cpr:CPR_2121 exonuclease family protein; exonuclease 4597007 5295159 Cbei_4003 Clostridium beijerinckii NCIMB 8052 exonuclease YP_001311069.1 4596240 D 290402 CDS YP_001311070.1 150018816 5295160 complement(4597100..4597795) 1 NC_009617.1 PFAM: response regulator receiver; KEGG: ctc:CTC01523 transcriptional regulatory protein; response regulator receiver 4597795 5295160 Cbei_4004 Clostridium beijerinckii NCIMB 8052 response regulator receiver YP_001311070.1 4597100 R 290402 CDS YP_001311071.1 150018817 5295161 complement(4597800..4599374) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; PAS fold domain protein; KEGG: ctc:CTC01524 sensor kinase DpiB; signal transduction histidine kinase regulating citrate/malate metabolism 4599374 5295161 Cbei_4005 Clostridium beijerinckii NCIMB 8052 signal transduction histidine kinase regulating citrate/malate metabolism YP_001311071.1 4597800 R 290402 CDS YP_001311072.1 150018818 5295162 complement(4599639..4600709) 1 NC_009617.1 catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase 4600709 5295162 Cbei_4006 Clostridium beijerinckii NCIMB 8052 butyrate kinase YP_001311072.1 4599639 R 290402 CDS YP_001311073.1 150018819 5295163 complement(4600892..4601866) 1 NC_009617.1 transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease 4601866 5295163 Cbei_4007 Clostridium beijerinckii NCIMB 8052 2-keto-3-deoxygluconate permease YP_001311073.1 4600892 R 290402 CDS YP_001311074.1 150018820 5295164 complement(4602069..4603241) 1 NC_009617.1 PFAM: UBA/THIF-type NAD/FAD binding protein; malic protein domain protein; malic protein, NAD-binding; KEGG: cpr:CPR_0140 NAD-dependent malic enzyme; malate dehydrogenase 4603241 5295164 Cbei_4008 Clostridium beijerinckii NCIMB 8052 malate dehydrogenase YP_001311074.1 4602069 R 290402 CDS YP_001311075.1 150018821 5295165 complement(4603584..4604399) 1 NC_009617.1 KEGG: bcl:ABC0828 hypothetical protein; hypothetical protein 4604399 5295165 Cbei_4009 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311075.1 4603584 R 290402 CDS YP_001311076.1 150018822 5295166 complement(4604468..4604983) 1 NC_009617.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: cac:CAC1467 transcriptional regulator, Lrp family; AsnC family transcriptional regulator 4604983 5295166 Cbei_4010 Clostridium beijerinckii NCIMB 8052 AsnC family transcriptional regulator YP_001311076.1 4604468 R 290402 CDS YP_001311077.1 150018823 5295167 4605054..4605476 1 NC_009617.1 KEGG: cac:CAC1466 hypothetical protein; hypothetical protein 4605476 5295167 Cbei_4011 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311077.1 4605054 D 290402 CDS YP_001311078.1 150018824 5295168 complement(4605538..4607337) 1 NC_009617.1 PFAM: chemotaxis sensory transducer; Heme NO binding domain protein; KEGG: cno:NT01CX_1000 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4607337 5295168 Cbei_4012 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001311078.1 4605538 R 290402 CDS YP_001311079.1 150018825 5295169 4607697..4609214 1 NC_009617.1 PFAM: GntR family transcriptional regulator; aminotransferase, class I and II; KEGG: cpf:CPF_0356 transcriptional regulator, GntR family/aminotransferase; GntR family transcriptional regulator 4609214 5295169 Cbei_4013 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001311079.1 4607697 D 290402 CDS YP_001311080.1 150018826 5295170 complement(4609297..4610637) 1 NC_009617.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: ayw:AYWB_324 NADH oxidase H2O2-forming; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4610637 5295170 Cbei_4014 Clostridium beijerinckii NCIMB 8052 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001311080.1 4609297 R 290402 CDS YP_001311081.1 150018827 5295171 complement(4610932..4611333) 1 NC_009617.1 PFAM: response regulator receiver; KEGG: cth:Cthe_0805 response regulator receiver protein; response regulator receiver protein 4611333 5295171 Cbei_4015 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001311081.1 4610932 R 290402 CDS YP_001311082.1 150018828 5295172 complement(4611369..4612877) 1 NC_009617.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cth:Cthe_0806 PAS/PAC sensor hybrid histidine kinase; histidine kinase 4612877 5295172 Cbei_4016 Clostridium beijerinckii NCIMB 8052 histidine kinase YP_001311082.1 4611369 R 290402 CDS YP_001311083.1 150018829 5295173 complement(4613059..4615953) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ppd:Ppro_1601 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4615953 5295173 Cbei_4017 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001311083.1 4613059 R 290402 CDS YP_001311084.1 150018830 5295174 complement(4616032..4616535) 1 NC_009617.1 PFAM: CheW domain protein; KEGG: cth:Cthe_0809 CheW protein; CheW protein 4616535 5295174 Cbei_4018 Clostridium beijerinckii NCIMB 8052 CheW protein YP_001311084.1 4616032 R 290402 CDS YP_001311085.1 150018831 5295175 complement(4616559..4618634) 1 NC_009617.1 PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; P2 response regulator binding domain protein; KEGG: cth:Cthe_0810 chemotaxis protein CheAs; chemotaxis protein CheA 4618634 5295175 Cbei_4019 Clostridium beijerinckii NCIMB 8052 chemotaxis protein CheA YP_001311085.1 4616559 R 290402 CDS YP_001311086.1 150018832 5295176 complement(4618659..4619012) 1 NC_009617.1 PFAM: response regulator receiver; KEGG: cth:Cthe_0811 response regulator receiver protein; response regulator receiver protein 4619012 5295176 Cbei_4020 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001311086.1 4618659 R 290402 CDS YP_001311087.1 150018833 5295177 complement(4619585..4620370) 1 NC_009617.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: cac:CAC2244 HAD superfamily hydrolases, YkrA B.subtilis ortholog; cof family hydrolase 4620370 5295177 Cbei_4021 Clostridium beijerinckii NCIMB 8052 cof family hydrolase YP_001311087.1 4619585 R 290402 CDS YP_001311088.1 150018834 5295178 4620559..4622823 1 NC_009617.1 PFAM: glycoside hydrolase, family 3 domain protein; KEGG: cth:Cthe_1256 glycoside hydrolase, family 3-like protein; glycoside hydrolase family protein 4622823 5295178 Cbei_4022 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase family protein YP_001311088.1 4620559 D 290402 CDS YP_001311089.1 150018835 5295179 complement(4622975..4623739) 1 NC_009617.1 PFAM: cell wall hydrolase/autolysin; KEGG: pcu:pc0315 N-acetylmuramoyl-L-alanine amidase; cell wall hydrolase/autolysin 4623739 5295179 Cbei_4023 Clostridium beijerinckii NCIMB 8052 cell wall hydrolase/autolysin YP_001311089.1 4622975 R 290402 CDS YP_001311090.1 150018836 5295180 complement(4623845..4624798) 1 NC_009617.1 PFAM: protein of unknown function DUF6, transmembrane; UAA transporter; KEGG: cac:CAC1538 predicted permease, YCXC B.subtilis ortholog; hypothetical protein 4624798 5295180 Cbei_4024 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311090.1 4623845 R 290402 CDS YP_001311091.1 150018837 5295181 4625108..4626001 1 NC_009617.1 KEGG: cno:NT01CX_0633 hypothetical protein; hypothetical protein 4626001 5295181 Cbei_4025 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311091.1 4625108 D 290402 CDS YP_001311092.1 150018838 5295182 4626006..4627097 1 NC_009617.1 KEGG: cac:CAC2427 hypothetical protein; hypothetical protein 4627097 5295182 Cbei_4026 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311092.1 4626006 D 290402 CDS YP_001311093.1 150018839 5295183 4627085..4628059 1 NC_009617.1 TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: cno:NT01CX_0631 activator of 2-hydroxyglutaryl-CoA dehydratase; CoA-substrate-specific enzyme activase 4628059 5295183 Cbei_4027 Clostridium beijerinckii NCIMB 8052 CoA-substrate-specific enzyme activase YP_001311093.1 4627085 D 290402 CDS YP_001311094.1 150018840 5295184 complement(4628154..4629509) 1 NC_009617.1 PFAM: amino acid permease-associated region; KEGG: lsa:LSA0125 amino acid/polyamine transport protein; amino acid permease-associated protein 4629509 5295184 Cbei_4028 Clostridium beijerinckii NCIMB 8052 amino acid permease-associated protein YP_001311094.1 4628154 R 290402 CDS YP_001311095.1 150018841 5295185 complement(4629620..4631080) 1 NC_009617.1 PFAM: glycosyl transferase, family 39; KEGG: gka:GK1918 hypothetical protein; glycosyl transferase family protein 4631080 5295185 Cbei_4029 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001311095.1 4629620 R 290402 CDS YP_001311096.1 150018842 5295186 complement(4631346..4631537) 1 NC_009617.1 hypothetical protein 4631537 5295186 Cbei_4030 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311096.1 4631346 R 290402 CDS YP_001311097.1 150018843 5295187 complement(4631632..4632498) 1 NC_009617.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cac:CAC2422 oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase; radical SAM domain-containing protein 4632498 5295187 Cbei_4031 Clostridium beijerinckii NCIMB 8052 radical SAM domain-containing protein YP_001311097.1 4631632 R 290402 CDS YP_001311098.1 150018844 5295188 complement(4632746..4633732) 1 NC_009617.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: cac:CAC0814 3-oxoacyl-[acyl-carrier-protein] synthase III; beta-ketoacyl-acyl-carrier-protein synthase I 4633732 5295188 Cbei_4032 Clostridium beijerinckii NCIMB 8052 beta-ketoacyl-acyl-carrier-protein synthase I YP_001311098.1 4632746 R 290402 CDS YP_001311099.1 150018845 5295189 complement(4633786..4634118) 1 NC_009617.1 hypothetical protein 4634118 5295189 Cbei_4033 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311099.1 4633786 R 290402 CDS YP_001311100.1 150018846 5295190 complement(4634458..4635423) 1 NC_009617.1 PFAM: protein of unknown function DUF939; KEGG: cac:CAC2484 predicted membrane, YQJA B.subtilis ortholog; hypothetical protein 4635423 5295190 Cbei_4034 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311100.1 4634458 R 290402 CDS YP_001311101.1 150018847 5295191 4636333..4637685 1 NC_009617.1 PFAM: GntR family transcriptional regulator; aminotransferase, class I and II; KEGG: bce:BC2526 transcriptional regulator, GntR family; GntR family transcriptional regulator 4637685 5295191 Cbei_4035 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001311101.1 4636333 D 290402 CDS YP_001311102.1 150018848 5295192 complement(4637732..4639045) 1 NC_009617.1 PFAM: glycoside hydrolase, family 4; KEGG: bce:BC5209 6-phospho-beta-glucosidase; 6-phospho-beta-glucosidase 4639045 5295192 Cbei_4036 Clostridium beijerinckii NCIMB 8052 6-phospho-beta-glucosidase YP_001311102.1 4637732 R 290402 CDS YP_001311103.1 150018849 5295193 complement(4639464..4640201) 1 NC_009617.1 PFAM: YdjC family protein; KEGG: bcl:ABC2079 possible cellobiose phosphotransferase system protein; hypothetical protein 4640201 5295193 Cbei_4037 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311103.1 4639464 R 290402 CDS YP_001311104.1 150018850 5295194 complement(4640399..4641757) 1 NC_009617.1 KEGG: cac:CAC3434 hypothetical protein; hypothetical protein 4641757 5295194 Cbei_4038 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311104.1 4640399 R 290402 CDS YP_001311105.1 150018851 5295195 complement(4641757..4642227) 1 NC_009617.1 KEGG: cac:CAC3435 hypothetical protein; hypothetical protein 4642227 5295195 Cbei_4039 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311105.1 4641757 R 290402 CDS YP_001311106.1 150018852 5295196 complement(4642628..4643854) 1 NC_009617.1 PFAM: peptidase M29, aminopeptidase II; KEGG: cpr:CPR_1965 aminopeptidase; peptidase M29, aminopeptidase II 4643854 5295196 Cbei_4040 Clostridium beijerinckii NCIMB 8052 peptidase M29, aminopeptidase II YP_001311106.1 4642628 R 290402 CDS YP_001311107.1 150018853 5295197 complement(4644157..4645008) 1 NC_009617.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 4645008 5295197 Cbei_4041 Clostridium beijerinckii NCIMB 8052 2-oxoglutarate ferredoxin oxidoreductase subunit beta YP_001311107.1 4644157 R 290402 CDS YP_001311108.1 150018854 5295198 complement(4645008..4646693) 1 NC_009617.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cac:CAC2459 2-oxoacid ferredoxin oxidoreductase, alpha subunit; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 4646693 5295198 Cbei_4042 Clostridium beijerinckii NCIMB 8052 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_001311108.1 4645008 R 290402 CDS YP_001311109.1 150018855 5295199 complement(4647678..4648226) 1 NC_009617.1 PFAM: microcompartments protein; KEGG: dde:Dde_3265 propanediol utilization protein PduT; microcompartments protein 4648226 5295199 Cbei_4043 Clostridium beijerinckii NCIMB 8052 microcompartments protein YP_001311109.1 4647678 R 290402 CDS YP_001311110.1 150018856 5295200 complement(4648267..4649592) 1 NC_009617.1 PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: dsy:DSY0411 hypothetical protein; respiratory-chain NADH dehydrogenase domain-containing protein 4649592 5295200 Cbei_4044 Clostridium beijerinckii NCIMB 8052 respiratory-chain NADH dehydrogenase domain-containing protein YP_001311110.1 4648267 R 290402 CDS YP_001311111.1 150018857 5295201 complement(4649811..4651229) 1 NC_009617.1 PFAM: aldehyde dehydrogenase; KEGG: rru:Rru_A0914 aldehyde dehydrogenase; aldehyde dehydrogenase 4651229 5295201 Cbei_4045 Clostridium beijerinckii NCIMB 8052 aldehyde dehydrogenase YP_001311111.1 4649811 R 290402 CDS YP_001311112.1 150018858 5295202 complement(4651255..4652073) 1 NC_009617.1 TIGRFAM: ethanolamine utilization protein EutJ family protein; KEGG: rru:Rru_A0910 ethanolamine utilization protein EutJ; ethanolamine utilization protein EutJ family protein 4652073 5295202 Cbei_4046 Clostridium beijerinckii NCIMB 8052 ethanolamine utilization protein EutJ family protein YP_001311112.1 4651255 R 290402 CDS YP_001311113.1 150018859 5295203 complement(4652113..4652751) 1 NC_009617.1 PFAM: Propanediol utilization protein; KEGG: dsy:DSY2876 hypothetical protein; propanediol utilization protein 4652751 5295203 Cbei_4047 Clostridium beijerinckii NCIMB 8052 propanediol utilization protein YP_001311113.1 4652113 R 290402 CDS YP_001311114.1 150018860 5295204 complement(4652788..4653066) 1 NC_009617.1 PFAM: microcompartments protein; KEGG: stm:STM2038 Propanediol utilization: polyhedral bodies; microcompartments protein 4653066 5295204 Cbei_4048 Clostridium beijerinckii NCIMB 8052 microcompartments protein YP_001311114.1 4652788 R 290402 CDS YP_001311115.1 150018861 5295205 complement(4653100..4653969) 1 NC_009617.1 KEGG: rru:Rru_A0923 hypothetical protein; hypothetical protein 4653969 5295205 Cbei_4049 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311115.1 4653100 R 290402 CDS YP_001311116.1 150018862 5295206 complement(4653990..4655189) 1 NC_009617.1 PFAM: S-adenosylmethionine synthetase; KEGG: rru:Rru_A0917 methionine adenosyltransferase; methionine adenosyltransferase 4655189 5295206 Cbei_4050 Clostridium beijerinckii NCIMB 8052 methionine adenosyltransferase YP_001311116.1 4653990 R 290402 CDS YP_001311117.1 150018863 5295207 complement(4655219..4656229) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: rru:Rru_A0919 two component transcriptional regulator, AraC family; response regulator receiver protein 4656229 5295207 Cbei_4051 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001311117.1 4655219 R 290402 CDS YP_001311118.1 150018864 5295208 complement(4656232..4657545) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase internal region; KEGG: cpe:CPE0927 two-component sensor histidine kinase; signal transduction histidine kinase LytS 4657545 5295208 Cbei_4052 Clostridium beijerinckii NCIMB 8052 signal transduction histidine kinase LytS YP_001311118.1 4656232 R 290402 CDS YP_001311119.1 150018865 5295209 complement(4657614..4658765) 1 NC_009617.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: lmf:LMOf2365_1174 propanol dehydrogenase; iron-containing alcohol dehydrogenase 4658765 5295209 Cbei_4053 Clostridium beijerinckii NCIMB 8052 iron-containing alcohol dehydrogenase YP_001311119.1 4657614 R 290402 CDS YP_001311120.1 150018866 5295210 complement(4658746..4660095) 1 NC_009617.1 PFAM: aldehyde dehydrogenase; KEGG: lmf:LMOf2365_1173 CoA-dependent propionaldehyde dehydrogenase; aldehyde dehydrogenase 4660095 5295210 Cbei_4054 Clostridium beijerinckii NCIMB 8052 aldehyde dehydrogenase YP_001311120.1 4658746 R 290402 CDS YP_001311121.1 150018867 5295211 complement(4660133..4660390) 1 NC_009617.1 PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: lin:lin1127 hypothetical protein; ethanolamine utilization protein EutN/carboxysome structural protein Ccml 4660390 5295211 Cbei_4055 Clostridium beijerinckii NCIMB 8052 ethanolamine utilization protein EutN/carboxysome structural protein Ccml YP_001311121.1 4660133 R 290402 CDS YP_001311122.1 150018868 5295212 complement(4660436..4661059) 1 NC_009617.1 PFAM: microcompartments protein; KEGG: lwe:lwe1116 propanediol utilization protein PduK; microcompartments protein 4661059 5295212 Cbei_4056 Clostridium beijerinckii NCIMB 8052 microcompartments protein YP_001311122.1 4660436 R 290402 CDS YP_001311123.1 150018869 5295213 complement(4661180..4661953) 1 NC_009617.1 hypothetical protein 4661953 5295213 Cbei_4057 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311123.1 4661180 R 290402 CDS YP_001311124.1 150018870 5295214 complement(4662034..4662312) 1 NC_009617.1 PFAM: microcompartments protein; KEGG: cno:NT01CX_0494 microcompartment protein; microcompartments protein 4662312 5295214 Cbei_4058 Clostridium beijerinckii NCIMB 8052 microcompartments protein YP_001311124.1 4662034 R 290402 CDS YP_001311125.1 150018871 5295215 complement(4662473..4663270) 1 NC_009617.1 PFAM: microcompartments protein; KEGG: lwe:lwe1110 propanediol utilization protein PduB; microcompartments protein 4663270 5295215 Cbei_4059 Clostridium beijerinckii NCIMB 8052 microcompartments protein YP_001311125.1 4662473 R 290402 CDS YP_001311126.1 150018872 5295216 complement(4663300..4664220) 1 NC_009617.1 TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Radical SAM domain protein; KEGG: rru:Rru_A0916 pyruvate-formate lyase-activating enzyme; glycyl-radical activating family protein 4664220 5295216 Cbei_4060 Clostridium beijerinckii NCIMB 8052 glycyl-radical activating family protein YP_001311126.1 4663300 R 290402 CDS YP_001311127.1 150018873 5295217 complement(4664312..4666846) 1 NC_009617.1 TIGRFAM: pyruvate formate-lyase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL; KEGG: rru:Rru_A0903 pyruvate formate-lyase; pyruvate formate-lyase 4666846 5295217 Cbei_4061 Clostridium beijerinckii NCIMB 8052 pyruvate formate-lyase YP_001311127.1 4664312 R 290402 CDS YP_001311128.1 150018874 5295218 complement(4666961..4667536) 1 NC_009617.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: rru:Rru_A0902 peptidase C56, PfpI; PfpI family intracellular peptidase 4667536 5295218 Cbei_4062 Clostridium beijerinckii NCIMB 8052 PfpI family intracellular peptidase YP_001311128.1 4666961 R 290402 CDS YP_001311129.1 150018875 5295219 complement(4667610..4668062) 1 NC_009617.1 TIGRFAM: ethanolamine utilization protein, EutP; KEGG: ssa:SSA_0509 propanediol utilization protein; ethanolamine utilization protein, EutP 4668062 5295219 Cbei_4063 Clostridium beijerinckii NCIMB 8052 ethanolamine utilization protein, EutP YP_001311129.1 4667610 R 290402 CDS YP_001311130.1 150018876 5295220 complement(4668071..4668451) 1 NC_009617.1 PFAM: microcompartments protein; KEGG: ctc:CTC02181 ethanolamine utilization protein eutS; microcompartments protein 4668451 5295220 Cbei_4064 Clostridium beijerinckii NCIMB 8052 microcompartments protein YP_001311130.1 4668071 R 290402 CDS YP_001311131.1 150018877 5295221 4668707..4669159 1 NC_009617.1 PFAM: protein of unknown function DUF336; KEGG: cpr:CPR_1010 hypothetical protein; hypothetical protein 4669159 5295221 Cbei_4065 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311131.1 4668707 D 290402 CDS YP_001311132.1 150018878 5295222 4669208..4669831 1 NC_009617.1 KEGG: bfs:BF3595 hypothetical protein; hypothetical protein 4669831 5295222 Cbei_4066 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311132.1 4669208 D 290402 CDS YP_001311133.1 150018879 5295223 complement(4670009..4671301) 1 NC_009617.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: cac:CAC2772 permease; xanthine/uracil/vitamin C permease 4671301 5295223 Cbei_4067 Clostridium beijerinckii NCIMB 8052 xanthine/uracil/vitamin C permease YP_001311133.1 4670009 R 290402 CDS YP_001311134.1 150018880 5295224 complement(4672089..4672844) 1 NC_009617.1 PFAM: protein of unknown function DUF124; KEGG: cac:CAC0556 uncharacterized conserved protein; hypothetical protein 4672844 5295224 Cbei_4068 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311134.1 4672089 R 290402 CDS YP_001311135.1 150018881 5295225 complement(4673219..4673689) 1 NC_009617.1 PFAM: iron dependent repressor; KEGG: cac:CAC2616 predicted iron-dependent transcription repressor; iron dependent repressor 4673689 5295225 Cbei_4069 Clostridium beijerinckii NCIMB 8052 iron dependent repressor YP_001311135.1 4673219 R 290402 CDS YP_001311136.1 150018882 5295226 4673910..4675208 1 NC_009617.1 TIGRFAM: Mn2+/Fe2+ transporter NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: cac:CA_P0063 NRAMP manganese transport protein MntA; manganese transport protein MntH 4675208 5295226 Cbei_4070 Clostridium beijerinckii NCIMB 8052 manganese transport protein MntH YP_001311136.1 4673910 D 290402 CDS YP_001311137.1 150018883 5295227 4675489..4676103 1 NC_009617.1 KEGG: cac:CAC0325 uncharacterized membrane protein, homolog of YtaF B.subtilis; hypothetical protein 4676103 5295227 Cbei_4071 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311137.1 4675489 D 290402 CDS YP_001311138.1 150018884 5295228 complement(4676262..4677212) 1 NC_009617.1 TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; KEGG: bar:GBAA5125 L-lactate dehydrogenase; L-lactate dehydrogenase 4677212 5295228 Cbei_4072 Clostridium beijerinckii NCIMB 8052 L-lactate dehydrogenase YP_001311138.1 4676262 R 290402 CDS YP_001311139.1 150018885 5295229 complement(4677303..4678073) 1 NC_009617.1 PFAM: LuxR family transcriptional regulator; KEGG: cac:CAC0445 protein, containing LuxR family transcriptional regulator HTH domain; LuxR family transcriptional regulator 4678073 5295229 Cbei_4073 Clostridium beijerinckii NCIMB 8052 LuxR family transcriptional regulator YP_001311139.1 4677303 R 290402 CDS YP_001311140.1 150018886 5295230 complement(4678361..4678600) 1 NC_009617.1 hypothetical protein 4678600 5295230 Cbei_4074 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311140.1 4678361 R 290402 CDS YP_001311141.1 150018887 5295231 complement(4678967..4679278) 1 NC_009617.1 KEGG: dsy:DSY0352 hypothetical protein; hypothetical protein 4679278 5295231 Cbei_4075 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311141.1 4678967 R 290402 CDS YP_001311142.1 150018888 5295232 complement(4680080..4680979) 1 NC_009617.1 TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: ana:all1784 ribokinase; ribokinase 4680979 5295232 Cbei_4076 Clostridium beijerinckii NCIMB 8052 ribokinase YP_001311142.1 4680080 R 290402 CDS YP_001311143.1 150018889 5295233 complement(4681145..4682842) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC1352 membrane associated chemotaxis sensory transducer protein (MSP domain and HAMP domain); methyl-accepting chemotaxis sensory transducer 4682842 5295233 Cbei_4077 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001311143.1 4681145 R 290402 CDS YP_001311144.1 150018890 5295234 complement(4682925..4684388) 1 NC_009617.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sus:Acid_6178 periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator 4684388 5295234 Cbei_4078 Clostridium beijerinckii NCIMB 8052 periplasmic binding protein/LacI transcriptional regulator YP_001311144.1 4682925 R 290402 CDS YP_001311145.1 150018891 5295235 complement(4684966..4685523) 1 NC_009617.1 KEGG: cno:NT01CX_0007 hypothetical protein; hypothetical protein 4685523 5295235 Cbei_4079 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311145.1 4684966 R 290402 CDS YP_001311146.1 150018892 5295236 complement(4686411..4686833) 1 NC_009617.1 PFAM: histidine triad (HIT) protein; KEGG: bth:BT_4586 hypothetical protein; histidine triad (HIT) protein 4686833 5295236 Cbei_4080 Clostridium beijerinckii NCIMB 8052 histidine triad (HIT) protein YP_001311146.1 4686411 R 290402 CDS YP_001311147.1 150018893 5295237 complement(4687118..4688623) 1 NC_009617.1 KEGG: eca:ECA3560 oligogalacturonide transporter; oligogalacturonide transporter 4688623 5295237 Cbei_4081 Clostridium beijerinckii NCIMB 8052 oligogalacturonide transporter YP_001311147.1 4687118 R 290402 CDS YP_001311148.1 150018894 5295238 complement(4688662..4690074) 1 NC_009617.1 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 4690074 5295238 Cbei_4082 Clostridium beijerinckii NCIMB 8052 glucuronate isomerase YP_001311148.1 4688662 R 290402 CDS YP_001311149.1 150018895 5295239 complement(4690487..4692100) 1 NC_009617.1 PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain; KEGG: mta:Moth_0429 mannitol dehydrogenase; mannitol dehydrogenase domain-containing protein 4692100 5295239 Cbei_4083 Clostridium beijerinckii NCIMB 8052 mannitol dehydrogenase domain-containing protein YP_001311149.1 4690487 R 290402 CDS YP_001311150.1 150018896 5295240 complement(4692214..4693275) 1 NC_009617.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase 4693275 5295240 Cbei_4084 Clostridium beijerinckii NCIMB 8052 mannonate dehydratase YP_001311150.1 4692214 R 290402 CDS YP_001311151.1 150018897 5295241 complement(4693466..4694137) 1 NC_009617.1 PFAM: GntR family transcriptional regulator; GntR domain protein; KEGG: bld:BLi01354 hypothetical protein; GntR family transcriptional regulator 4694137 5295241 Cbei_4085 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001311151.1 4693466 R 290402 CDS YP_001311152.1 150018898 5295242 4694484..4696163 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC3397 membrane associated methyl-accepting chemotaxis protein (with HamP domain); methyl-accepting chemotaxis sensory transducer 4696163 5295242 Cbei_4086 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001311152.1 4694484 D 290402 CDS YP_001311153.1 150018899 5295243 4696245..4697420 1 NC_009617.1 KEGG: bmb:BruAb2_0422 ABC transporter periplasmic protein; ABC transporter substrate-binding protein 4697420 5295243 Cbei_4087 Clostridium beijerinckii NCIMB 8052 ABC transporter substrate-binding protein YP_001311153.1 4696245 D 290402 CDS YP_001311154.1 150018900 5295244 complement(4697500..4699362) 1 NC_009617.1 KEGG: cac:CA_P0027 predicted amino acid permeases; amino acid permease 4699362 5295244 Cbei_4088 Clostridium beijerinckii NCIMB 8052 amino acid permease YP_001311154.1 4697500 R 290402 CDS YP_001311155.1 150018901 5295245 4699934..4700230 1 NC_009617.1 KEGG: cpr:CPR_2278 hypothetical protein; hypothetical protein 4700230 5295245 Cbei_4089 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311155.1 4699934 D 290402 CDS YP_001311156.1 150018902 5295246 complement(4700368..4700811) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY4363 hypothetical protein; N-acetyltransferase GCN5 4700811 5295246 Cbei_4090 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001311156.1 4700368 R 290402 CDS YP_001311157.1 150018903 5295247 complement(4701100..4701255) 1 NC_009617.1 hypothetical protein 4701255 5295247 Cbei_4091 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311157.1 4701100 R 290402 CDS YP_001311158.1 150018904 5295248 complement(4701408..4702469) 1 NC_009617.1 PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: cac:CAC1626 glycerol dehydrogenase; 3-dehydroquinate synthase 4702469 5295248 Cbei_4092 Clostridium beijerinckii NCIMB 8052 3-dehydroquinate synthase YP_001311158.1 4701408 R 290402 CDS YP_001311159.1 150018905 5295249 complement(4702565..4702876) 1 NC_009617.1 hypothetical protein 4702876 5295249 Cbei_4093 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311159.1 4702565 R 290402 CDS YP_001311160.1 150018906 5295250 complement(4702960..4703151) 1 NC_009617.1 PFAM: PspC domain protein; KEGG: bat:BAS4399 hypothetical protein; phage shock protein C 4703151 5295250 Cbei_4094 Clostridium beijerinckii NCIMB 8052 phage shock protein C YP_001311160.1 4702960 R 290402 CDS YP_001311161.1 150018907 5295251 complement(4703556..4705271) 1 NC_009617.1 PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: cno:NT01CX_1480 dihydroxyacid dehydratase; dihydroxy-acid dehydratase 4705271 5295251 Cbei_4095 Clostridium beijerinckii NCIMB 8052 dihydroxy-acid dehydratase YP_001311161.1 4703556 R 290402 CDS YP_001311162.1 150018908 5295252 complement(4705502..4706230) 1 NC_009617.1 PFAM: GntR family transcriptional regulator; GntR domain protein; KEGG: sph:MGAS10270_Spy1173 transcriptional regulator, GntR family; GntR family transcriptional regulator 4706230 5295252 Cbei_4096 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001311162.1 4705502 R 290402 CDS YP_001311163.1 150018909 5295253 complement(4706787..4708190) 1 NC_009617.1 PFAM: amino acid permease-associated region; KEGG: cno:NT01CX_1994 amino acid permease; amino acid permease-associated protein 4708190 5295253 Cbei_4097 Clostridium beijerinckii NCIMB 8052 amino acid permease-associated protein YP_001311163.1 4706787 R 290402 CDS YP_001311164.1 150018910 5295254 complement(4708602..4709081) 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: cya:CYA_1758 transcriptional regulator, MarR family; MarR family transcriptional regulator 4709081 5295254 Cbei_4098 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001311164.1 4708602 R 290402 CDS YP_001311165.1 150018911 5295255 complement(4709047..4710639) 1 NC_009617.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: chy:CHY_1864 drug resistance transporter EmrB/QacA family; EmrB/QacA family drug resistance transporter 4710639 5295255 Cbei_4099 Clostridium beijerinckii NCIMB 8052 EmrB/QacA family drug resistance transporter YP_001311165.1 4709047 R 290402 CDS YP_001311166.1 150018912 5295256 complement(4710652..4711305) 1 NC_009617.1 KEGG: mta:Moth_2323 secretion protein HlyD; secretion protein HlyD 4711305 5295256 Cbei_4100 Clostridium beijerinckii NCIMB 8052 secretion protein HlyD YP_001311166.1 4710652 R 290402 CDS YP_001311167.1 150018913 5295257 complement(4711325..4712308) 1 NC_009617.1 PFAM: secretion protein HlyD family protein; KEGG: mta:Moth_2322 secretion protein HlyD; secretion protein HlyD family protein 4712308 5295257 Cbei_4101 Clostridium beijerinckii NCIMB 8052 secretion protein HlyD family protein YP_001311167.1 4711325 R 290402 CDS YP_001311168.1 150018914 5295258 complement(4712576..4713982) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cac:CAC2434 membrane associatehistidine kinase with HAMP domain; integral membrane sensor signal transduction histidine kinase 4713982 5295258 Cbei_4102 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001311168.1 4712576 R 290402 CDS YP_001311169.1 150018915 5295259 complement(4713969..4714655) 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cac:CAC2435 response regulator (CheY-like domain and HTH-type DNA-binding domain); two component transcriptional regulator 4714655 5295259 Cbei_4103 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001311169.1 4713969 R 290402 CDS YP_001311170.1 150018916 5295260 complement(4714802..4716193) 1 NC_009617.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: cac:CAC0747 secreted protein containing uncharacterized conserved protein of ErfK family; ErfK/YbiS/YcfS/YnhG family protein 4716193 5295260 Cbei_4104 Clostridium beijerinckii NCIMB 8052 ErfK/YbiS/YcfS/YnhG family protein YP_001311170.1 4714802 R 290402 CDS YP_001311171.1 150018917 5295261 complement(4716312..4718045) 1 NC_009617.1 PFAM: amine oxidase; KEGG: ter:Tery_1366 amine oxidase; amine oxidase 4718045 5295261 Cbei_4105 Clostridium beijerinckii NCIMB 8052 amine oxidase YP_001311171.1 4716312 R 290402 CDS YP_001311172.1 150018918 5295262 complement(4718178..4719563) 1 NC_009617.1 KEGG: cac:CAC0747 secreted protein containing uncharacterized conserved protein of ErfK family; ErfK family protein 4719563 5295262 Cbei_4106 Clostridium beijerinckii NCIMB 8052 ErfK family protein YP_001311172.1 4718178 R 290402 CDS YP_001311173.1 150018919 5295263 complement(4719764..4720237) 1 NC_009617.1 PFAM: iron dependent repressor; KEGG: cth:Cthe_1402 iron (metal) dependent repressor, DtxR family; iron dependent repressor 4720237 5295263 Cbei_4107 Clostridium beijerinckii NCIMB 8052 iron dependent repressor YP_001311173.1 4719764 R 290402 CDS YP_001311174.1 150018920 5295264 complement(4720583..4720933) 1 NC_009617.1 PFAM: helix-turn-helix, HxlR type; KEGG: cac:CAC2568 predicted transcriptional regulator; HxlR family transcriptional regulator 4720933 5295264 Cbei_4108 Clostridium beijerinckii NCIMB 8052 HxlR family transcriptional regulator YP_001311174.1 4720583 R 290402 CDS YP_001311175.1 150018921 5295265 4721061..4721369 1 NC_009617.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: cac:CAC2569 NimC/NimA family protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 4721369 5295265 Cbei_4109 Clostridium beijerinckii NCIMB 8052 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001311175.1 4721061 D 290402 CDS YP_001311176.1 150018922 5295266 complement(4721470..4723173) 1 NC_009617.1 TIGRFAM: hydrogenase, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; iron hydrogenase, small subunit; hydrogenase large subunit domain protein; KEGG: cth:Cthe_0430 hydrogenase, Fe-only; hydrogenase, Fe-only 4723173 5295266 Cbei_4110 Clostridium beijerinckii NCIMB 8052 hydrogenase, Fe-only YP_001311176.1 4721470 R 290402 CDS YP_001311177.1 150018923 5295267 complement(4723253..4725133) 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: cth:Cthe_0429 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 4725133 5295267 Cbei_4111 Clostridium beijerinckii NCIMB 8052 NADH dehydrogenase (quinone) YP_001311177.1 4723253 R 290402 CDS YP_001311178.1 150018924 5295268 complement(4725123..4725617) 1 NC_009617.1 PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; KEGG: cth:Cthe_0428 NADH dehydrogenase (ubiquinone), 24 kDa subunit; NADH dehydrogenase (ubiquinone), 24 kDa subunit 4725617 5295268 Cbei_4112 Clostridium beijerinckii NCIMB 8052 NADH dehydrogenase (ubiquinone), 24 kDa subunit YP_001311178.1 4725123 R 290402 CDS YP_001311179.1 150018925 5295269 4726029..4727192 1 NC_009617.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 4727192 alr 5295269 alr Clostridium beijerinckii NCIMB 8052 alanine racemase YP_001311179.1 4726029 D 290402 CDS YP_001311180.1 150018926 5295270 complement(4727633..4729438) 1 NC_009617.1 PFAM: GTP-binding protein, HSR1-related; KEGG: tte:TTE1899 predicted GTPase (dynamin-related); HSR1-like GTP-binding protein 4729438 5295270 Cbei_4114 Clostridium beijerinckii NCIMB 8052 HSR1-like GTP-binding protein YP_001311180.1 4727633 R 290402 CDS YP_001311181.1 150018927 5295271 complement(4729444..4731216) 1 NC_009617.1 KEGG: tte:TTE1899 predicted GTPase (dynamin-related); hypothetical protein 4731216 5295271 Cbei_4115 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311181.1 4729444 R 290402 CDS YP_001311182.1 150018928 5295272 complement(4731223..4731912) 1 NC_009617.1 KEGG: ehi:3.t00030 hypothetical protein Pfam: Snf7 Apolipoprotein DUF19 Myosin_tail_1 Filament PFEMP FH2 DHC_N1 EzrA Laminin_I DUF1664 TLD PROSITE: ASP_RICH GLU_RICH LYS_RICH; hypothetical protein 4731912 5295272 Cbei_4116 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311182.1 4731223 R 290402 CDS YP_001311183.1 150018929 5295273 complement(4731921..4734434) 1 NC_009617.1 KEGG: tte:TTE1899 predicted GTPase (dynamin-related); hypothetical protein 4734434 5295273 Cbei_4117 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311183.1 4731921 R 290402 CDS YP_001311184.1 150018930 5295274 complement(4734977..4735708) 1 NC_009617.1 PFAM: aminotransferase, class IV; KEGG: cpr:CPR_1095 branched-chain amino acid aminotransferase; class IV aminotransferase 4735708 5295274 Cbei_4118 Clostridium beijerinckii NCIMB 8052 class IV aminotransferase YP_001311184.1 4734977 R 290402 CDS YP_001311185.1 150018931 5295275 complement(4735708..4737063) 1 NC_009617.1 TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: cpr:CPR_1094 para-aminobenzoate synthase, component I; para-aminobenzoate synthase subunit I 4737063 5295275 Cbei_4119 Clostridium beijerinckii NCIMB 8052 para-aminobenzoate synthase subunit I YP_001311185.1 4735708 R 290402 CDS YP_001311186.1 150018932 5295276 complement(4737050..4737640) 1 NC_009617.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: cpr:CPR_1093 para-aminobenzoate synthase glutamine amidotransferase, component II; glutamine amidotransferase of anthranilate synthase 4737640 5295276 Cbei_4120 Clostridium beijerinckii NCIMB 8052 glutamine amidotransferase of anthranilate synthase YP_001311186.1 4737050 R 290402 CDS YP_001311187.1 150018933 5295277 complement(4737953..4739134) 1 NC_009617.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: cpr:CPR_1123 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 4739134 5295277 Cbei_4121 Clostridium beijerinckii NCIMB 8052 cyclopropane-fatty-acyl-phospholipid synthase YP_001311187.1 4737953 R 290402 CDS YP_001311188.1 150018934 5295278 complement(4739363..4740550) 1 NC_009617.1 KEGG: cno:NT01CX_0690 hypothetical protein; hypothetical protein 4740550 5295278 Cbei_4122 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311188.1 4739363 R 290402 CDS YP_001311189.1 150018935 5295279 complement(4740893..4741342) 1 NC_009617.1 PFAM: heat shock protein Hsp20; KEGG: ctc:CTC02469 heat shock protein, molecular chaperone; heat shock protein Hsp20 4741342 5295279 Cbei_4123 Clostridium beijerinckii NCIMB 8052 heat shock protein Hsp20 YP_001311189.1 4740893 R 290402 CDS YP_001311190.1 150018936 5295280 complement(4741552..4743252) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cth:Cthe_1498 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4743252 5295280 Cbei_4124 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001311190.1 4741552 R 290402 CDS YP_001311191.1 150018937 5295281 complement(4743686..4745059) 1 NC_009617.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BG12262 beta xyloside H+-symporter; sugar (glycoside-Pentoside-hexuronide) transporter 4745059 5295281 Cbei_4125 Clostridium beijerinckii NCIMB 8052 sugar (glycoside-Pentoside-hexuronide) transporter YP_001311191.1 4743686 R 290402 CDS YP_001311192.1 150018938 5295282 complement(4745302..4746963) 1 NC_009617.1 PFAM: glycoside hydrolase, family 43; KEGG: cac:CAC3452 beta-xylosidase, family 43 glycosyl hydrolase; alpha-N-arabinofuranosidase 4746963 5295282 Cbei_4126 Clostridium beijerinckii NCIMB 8052 alpha-N-arabinofuranosidase YP_001311192.1 4745302 R 290402 CDS YP_001311193.1 150018939 5295283 complement(4747125..4748861) 1 NC_009617.1 PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: rpc:RPC_4380 dihydroxy-acid dehydratase; dihydroxy-acid dehydratase 4748861 5295283 Cbei_4127 Clostridium beijerinckii NCIMB 8052 dihydroxy-acid dehydratase YP_001311193.1 4747125 R 290402 CDS YP_001311194.1 150018940 5295284 complement(4748927..4749814) 1 NC_009617.1 PFAM: dihydrodipicolinate synthetase; KEGG: chy:CHY_1320 dihydrodipicolinate synthase; dihydrodipicolinate synthetase 4749814 5295284 Cbei_4128 Clostridium beijerinckii NCIMB 8052 dihydrodipicolinate synthetase YP_001311194.1 4748927 R 290402 CDS YP_001311195.1 150018941 5295285 complement(4749899..4750666) 1 NC_009617.1 PFAM: IclR family transcriptional regulator; Transcriptional regulator IclR-like; KEGG: bld:BLi04073 hypothetical protein; transcriptional regulator IclR-like protein 4750666 5295285 Cbei_4129 Clostridium beijerinckii NCIMB 8052 transcriptional regulator IclR-like protein YP_001311195.1 4749899 R 290402 CDS YP_001311196.1 150018942 5295286 complement(4750827..4752002) 1 NC_009617.1 PFAM: regulatory protein, MerR; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ctc:CTC01641 transcriptional regulatory protein; type 11 methyltransferase 4752002 5295286 Cbei_4130 Clostridium beijerinckii NCIMB 8052 type 11 methyltransferase YP_001311196.1 4750827 R 290402 CDS YP_001311197.1 150018943 5295287 4752177..4752998 1 NC_009617.1 KEGG: ddi:DDBDRAFT_0185950 hypothetical protein; hypothetical protein 4752998 5295287 Cbei_4131 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311197.1 4752177 D 290402 CDS YP_001311198.1 150018944 5295288 complement(4753094..4754269) 1 NC_009617.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: ctc:CTC01639 spore coat polysaccharide biosynthesis protein SpsC; DegT/DnrJ/EryC1/StrS aminotransferase 4754269 5295288 Cbei_4132 Clostridium beijerinckii NCIMB 8052 DegT/DnrJ/EryC1/StrS aminotransferase YP_001311198.1 4753094 R 290402 CDS YP_001311199.1 150018945 5295289 complement(4754675..4756390) 1 NC_009617.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: tte:TTE1253 predicted hydrolase of the metallo-beta-lactamase superfamily; beta-lactamase domain-containing protein 4756390 5295289 Cbei_4133 Clostridium beijerinckii NCIMB 8052 beta-lactamase domain-containing protein YP_001311199.1 4754675 R 290402 CDS YP_001311200.1 150018946 5295290 complement(4756624..4757394) 1 NC_009617.1 KEGG: bat:BAS0215 hypothetical protein; hypothetical protein 4757394 5295290 Cbei_4134 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311200.1 4756624 R 290402 CDS YP_001311201.1 150018947 5295291 complement(4757423..4759396) 1 NC_009617.1 TIGRFAM: pullulanase, type I; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: cpe:CPE1552 pullulanase; pullulanase 4759396 5295291 Cbei_4135 Clostridium beijerinckii NCIMB 8052 pullulanase YP_001311201.1 4757423 R 290402 CDS YP_001311202.1 150018948 5295292 complement(4759496..4760839) 1 NC_009617.1 PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: cac:CAC2686 possible maltodextrin glucosidase; alpha amylase 4760839 5295292 Cbei_4136 Clostridium beijerinckii NCIMB 8052 alpha amylase YP_001311202.1 4759496 R 290402 CDS YP_001311203.1 150018949 5295293 4761099..4761572 1 NC_009617.1 hypothetical protein 4761572 5295293 Cbei_4137 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311203.1 4761099 D 290402 CDS YP_001311204.1 150018950 5295294 complement(4761643..4762671) 1 NC_009617.1 PFAM: alpha/beta hydrolase fold; KEGG: cac:CAC2246 lysophospholipase L2 PLDB, hydrolase of alpha/beta superfamily; alpha/beta fold family hydrolase 4762671 5295294 Cbei_4138 Clostridium beijerinckii NCIMB 8052 alpha/beta fold family hydrolase YP_001311204.1 4761643 R 290402 CDS YP_001311205.1 150018951 5295295 complement(4762971..4764038) 1 NC_009617.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cac:CAC2620 HD-GYP hydrolase domain containing protein; metal dependent phosphohydrolase 4764038 5295295 Cbei_4139 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001311205.1 4762971 R 290402 CDS YP_001311206.1 150018952 5295296 complement(4764378..4764536) 1 NC_009617.1 KEGG: cno:NT01CX_2018 hypothetical protein; hypothetical protein 4764536 5295296 Cbei_4140 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311206.1 4764378 R 290402 CDS YP_001311207.1 150018953 5295297 complement(4764654..4765001) 1 NC_009617.1 PFAM: arsenate reductase and related; KEGG: cac:CAC0417 similar to arsenate reductase; arsenate reductase-like protein 4765001 5295297 Cbei_4141 Clostridium beijerinckii NCIMB 8052 arsenate reductase-like protein YP_001311207.1 4764654 R 290402 CDS YP_001311208.1 150018954 5295298 complement(4765404..4766117) 1 NC_009617.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 4766117 deoD 5295298 deoD Clostridium beijerinckii NCIMB 8052 purine nucleoside phosphorylase YP_001311208.1 4765404 R 290402 CDS YP_001311209.1 150018955 5295299 complement(4766192..4766842) 1 NC_009617.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 4766842 5295299 Cbei_4143 Clostridium beijerinckii NCIMB 8052 deoxyribose-phosphate aldolase YP_001311209.1 4766192 R 290402 CDS YP_001311210.1 150018956 5295300 complement(4767040..4767924) 1 NC_009617.1 PFAM: inner-membrane translocator; KEGG: cth:Cthe_1581 inner-membrane translocator; inner-membrane translocator 4767924 5295300 Cbei_4144 Clostridium beijerinckii NCIMB 8052 inner-membrane translocator YP_001311210.1 4767040 R 290402 CDS YP_001311211.1 150018957 5295301 complement(4767914..4769041) 1 NC_009617.1 PFAM: inner-membrane translocator; KEGG: cth:Cthe_1580 inner-membrane translocator; inner-membrane translocator 4769041 5295301 Cbei_4145 Clostridium beijerinckii NCIMB 8052 inner-membrane translocator YP_001311211.1 4767914 R 290402 CDS YP_001311212.1 150018958 5295302 complement(4769016..4770566) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cth:Cthe_1579 ABC transporter protein; ABC transporter 4770566 5295302 Cbei_4146 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001311212.1 4769016 R 290402 CDS YP_001311213.1 150018959 5295303 complement(4770763..4771821) 1 NC_009617.1 PFAM: basic membrane lipoprotein; KEGG: gka:GK1283 ABC transporter (lipoprotein); basic membrane lipoprotein 4771821 5295303 Cbei_4147 Clostridium beijerinckii NCIMB 8052 basic membrane lipoprotein YP_001311213.1 4770763 R 290402 CDS YP_001311214.1 150018960 5295304 complement(4772080..4773096) 1 NC_009617.1 PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: cno:NT01CX_1495 transcriptional regulator; alanine racemase 4773096 5295304 Cbei_4148 Clostridium beijerinckii NCIMB 8052 alanine racemase YP_001311214.1 4772080 R 290402 CDS YP_001311215.1 150018961 5295305 complement(4773518..4774690) 1 NC_009617.1 PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase, class I and II; KEGG: cpr:CPR_0701 aspartate aminotransferase; class I and II aminotransferase 4774690 5295305 Cbei_4149 Clostridium beijerinckii NCIMB 8052 class I and II aminotransferase YP_001311215.1 4773518 R 290402 CDS YP_001311216.1 150018962 5295306 complement(4774687..4775166) 1 NC_009617.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: cpr:CPR_0700 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 4775166 5295306 Cbei_4150 Clostridium beijerinckii NCIMB 8052 AsnC family transcriptional regulator YP_001311216.1 4774687 R 290402 CDS YP_001311217.1 150018963 5295307 complement(4775777..4775932) 1 NC_009617.1 KEGG: cno:NT01CX_0353 hypothetical protein; hypothetical protein 4775932 5295307 Cbei_4151 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311217.1 4775777 R 290402 CDS YP_001311218.1 150018964 5295308 complement(4776175..4778451) 1 NC_009617.1 PFAM: ATPase AAA, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: ATPase AAA; KEGG: cth:Cthe_1217 ATP-dependent Clp protease, ATP-binding subunit ClpA; ATPase 4778451 5295308 Cbei_4152 Clostridium beijerinckii NCIMB 8052 ATPase YP_001311218.1 4776175 R 290402 CDS YP_001311219.1 150018965 5295309 complement(4778455..4778754) 1 NC_009617.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: cth:Cthe_1216 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 4778754 5295309 Cbei_4153 Clostridium beijerinckii NCIMB 8052 ATP-dependent Clp protease adaptor protein ClpS YP_001311219.1 4778455 R 290402 CDS YP_001311220.1 150018966 5295310 complement(4778879..4780306) 1 NC_009617.1 PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: cno:NT01CX_0762 arginine/lysine/ornithine decarboxylases; Orn/Lys/Arg decarboxylase 4780306 5295310 Cbei_4154 Clostridium beijerinckii NCIMB 8052 Orn/Lys/Arg decarboxylase YP_001311220.1 4778879 R 290402 CDS YP_001311221.1 150018967 5295311 complement(4780786..4781805) 1 NC_009617.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: dsy:DSY4242 hypothetical protein; threonine aldolase 4781805 5295311 Cbei_4155 Clostridium beijerinckii NCIMB 8052 threonine aldolase YP_001311221.1 4780786 R 290402 CDS YP_001311222.1 150018968 5295312 complement(4781820..4783064) 1 NC_009617.1 PFAM: peptidase M16 domain protein; KEGG: ctc:CTC01755 zinc protease; peptidase M16 domain-containing protein 4783064 5295312 Cbei_4156 Clostridium beijerinckii NCIMB 8052 peptidase M16 domain-containing protein YP_001311222.1 4781820 R 290402 CDS YP_001311223.1 150018969 5295313 complement(4783430..4784791) 1 NC_009617.1 PFAM: Radical SAM domain protein; KEGG: cac:CAC2279 heme biosynthesis (nirJ-2) family protein; radical SAM domain-containing protein 4784791 5295313 Cbei_4157 Clostridium beijerinckii NCIMB 8052 radical SAM domain-containing protein YP_001311223.1 4783430 R 290402 CDS YP_001311224.1 150018970 5295314 complement(4785200..4785463) 1 NC_009617.1 PFAM: phosphotransferase system PTS, EIIB protein; KEGG: eca:ECA4388 PTS system, IIABC component; PTS system transporter subunit IIB 4785463 5295314 Cbei_4158 Clostridium beijerinckii NCIMB 8052 PTS system transporter subunit IIB YP_001311224.1 4785200 R 290402 CDS YP_001311225.1 150018971 5295315 complement(4785663..4788131) 1 NC_009617.1 PFAM: LuxR family transcriptional regulator; KEGG: swo:Swol_1080 ATP-dependent transcriptional regulator-like protein; LuxR family transcriptional regulator 4788131 5295315 Cbei_4159 Clostridium beijerinckii NCIMB 8052 LuxR family transcriptional regulator YP_001311225.1 4785663 R 290402 CDS YP_001311226.1 150018972 5295316 complement(4788381..4790315) 1 NC_009617.1 molecular chaperone; heat shock protein 90 4790315 5295316 Cbei_4160 Clostridium beijerinckii NCIMB 8052 heat shock protein 90 YP_001311226.1 4788381 R 290402 CDS YP_001311227.1 150018973 5295317 complement(4790529..4792241) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01211 methyl-accepting chemotaxis protein TlpA; methyl-accepting chemotaxis sensory transducer 4792241 5295317 Cbei_4161 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001311227.1 4790529 R 290402 CDS YP_001311228.1 150018974 5295318 4792458..4793222 1 NC_009617.1 PFAM: regulatory protein, MerR; TipAS antibiotic-recognition domain protein; KEGG: dsy:DSY4240 hypothetical protein; MerR family transcriptional regulator 4793222 5295318 Cbei_4162 Clostridium beijerinckii NCIMB 8052 MerR family transcriptional regulator YP_001311228.1 4792458 D 290402 CDS YP_001311229.1 150018975 5295319 complement(4793388..4794062) 1 NC_009617.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: dsy:DSY1176 hypothetical protein; metal dependent phosphohydrolase 4794062 5295319 Cbei_4163 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001311229.1 4793388 R 290402 CDS YP_001311230.1 150018976 5295320 complement(4794154..4794537) 1 NC_009617.1 KEGG: cac:CAC3264 uncharacterized conserved protein, YTFJ B.subtilis ortholog; hypothetical protein 4794537 5295320 Cbei_4164 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311230.1 4794154 R 290402 CDS YP_001311231.1 150018977 5295321 complement(4795061..4796830) 1 NC_009617.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase, HD sub domain; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; metal-dependent phosphohydrolase, HD region; KEGG: cpf:CPF_1164 sensory box-containing diguanylate cyclase; diguanylate cyclase and metal dependent phosphohydrolase 4796830 5295321 Cbei_4165 Clostridium beijerinckii NCIMB 8052 diguanylate cyclase and metal dependent phosphohydrolase YP_001311231.1 4795061 R 290402 CDS YP_001311232.1 150018978 5295322 complement(4796970..4799003) 1 NC_009617.1 PFAM: protein of unknown function DUF214; KEGG: cpe:CPE0851 probable ABC transporter; hypothetical protein 4799003 5295322 Cbei_4166 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311232.1 4796970 R 290402 CDS YP_001311233.1 150018979 5295323 complement(4798993..4799760) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_0841 ABC transporter ATP-binding protein; ABC transporter 4799760 5295323 Cbei_4167 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001311233.1 4798993 R 290402 CDS YP_001311234.1 150018980 5295324 complement(4800101..4801114) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cpf:CPF_0837 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 4801114 5295324 Cbei_4168 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001311234.1 4800101 R 290402 CDS YP_001311235.1 150018981 5295325 complement(4801111..4801782) 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cpf:CPF_0836 DNA-binding response regulator; two component transcriptional regulator 4801782 5295325 Cbei_4169 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001311235.1 4801111 R 290402 CDS YP_001311236.1 150018982 5295326 complement(4802151..4802783) 1 NC_009617.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsy:DSY4275 hypothetical protein; polar amino acid ABC transporter inner membrane subunit 4802783 5295326 Cbei_4170 Clostridium beijerinckii NCIMB 8052 polar amino acid ABC transporter inner membrane subunit YP_001311236.1 4802151 R 290402 CDS YP_001311237.1 150018983 5295327 complement(4802786..4803514) 1 NC_009617.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsy:DSY4276 hypothetical protein; polar amino acid ABC transporter inner membrane subunit 4803514 5295327 Cbei_4171 Clostridium beijerinckii NCIMB 8052 polar amino acid ABC transporter inner membrane subunit YP_001311237.1 4802786 R 290402 CDS YP_001311238.1 150018984 5295328 complement(4803514..4804326) 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 3; KEGG: dsy:DSY4277 hypothetical protein; extracellular solute-binding protein 4804326 5295328 Cbei_4172 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001311238.1 4803514 R 290402 CDS YP_001311239.1 150018985 5295329 complement(4804409..4805131) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY4278 hypothetical protein; ABC transporter 4805131 5295329 Cbei_4173 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001311239.1 4804409 R 290402 CDS YP_001311240.1 150018986 5295330 complement(4805413..4806297) 1 NC_009617.1 PFAM: response regulator receiver; YcbB domain; KEGG: tte:TTE1203 CheY-like receiver domains; response regulator receiver 4806297 5295330 Cbei_4174 Clostridium beijerinckii NCIMB 8052 response regulator receiver YP_001311240.1 4805413 R 290402 CDS YP_001311241.1 150018987 5295331 complement(4806325..4807587) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: tte:TTE1202 Sensory transduction histidine kinases; signal transduction histidine kinase regulating citrate/malate metabolism 4807587 5295331 Cbei_4175 Clostridium beijerinckii NCIMB 8052 signal transduction histidine kinase regulating citrate/malate metabolism YP_001311241.1 4806325 R 290402 CDS YP_001311242.1 150018988 5295332 complement(4807694..4808014) 1 NC_009617.1 PFAM: branched-chain amino acid transport; KEGG: bca:BCE_4093 hypothetical protein; branched-chain amino acid transporter 4808014 5295332 Cbei_4176 Clostridium beijerinckii NCIMB 8052 branched-chain amino acid transporter YP_001311242.1 4807694 R 290402 CDS YP_001311243.1 150018989 5295333 complement(4808011..4808745) 1 NC_009617.1 PFAM: AzlC family protein; KEGG: bca:BCE_4092 AzlC family protein; AzlC family protein 4808745 5295333 Cbei_4177 Clostridium beijerinckii NCIMB 8052 AzlC family protein YP_001311243.1 4808011 R 290402 CDS YP_001311244.1 150018990 5295334 4808866..4809417 1 NC_009617.1 PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; KEGG: ctc:CTC01439 transcriptional regulatory protein; XRE family transcriptional regulator 4809417 5295334 Cbei_4178 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001311244.1 4808866 D 290402 CDS YP_001311245.1 150018991 5295335 complement(4809427..4810341) 1 NC_009617.1 PFAM: Auxin Efflux Carrier; KEGG: smu:SMU.909 permease; auxin efflux carrier 4810341 5295335 Cbei_4179 Clostridium beijerinckii NCIMB 8052 auxin efflux carrier YP_001311245.1 4809427 R 290402 CDS YP_001311246.1 150018992 5295336 complement(4810589..4811656) 1 NC_009617.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: cth:Cthe_2281 response regulator receiver modulated CheB methylesterase; response regulator receiver modulated CheB methylesterase 4811656 5295336 Cbei_4180 Clostridium beijerinckii NCIMB 8052 response regulator receiver modulated CheB methylesterase YP_001311246.1 4810589 R 290402 CDS YP_001311247.1 150018993 5295337 complement(4811653..4812465) 1 NC_009617.1 PFAM: MCP methyltransferase, CheR-type; KEGG: cth:Cthe_2282 MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase 4812465 5295337 Cbei_4181 Clostridium beijerinckii NCIMB 8052 protein-glutamate O-methyltransferase YP_001311247.1 4811653 R 290402 CDS YP_001311248.1 150018994 5295338 complement(4812626..4817047) 1 NC_009617.1 PFAM: chemotaxis sensory transducer; KEGG: cth:Cthe_2819 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4817047 5295338 Cbei_4182 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001311248.1 4812626 R 290402 CDS YP_001311249.1 150018995 5295339 complement(4817081..4819237) 1 NC_009617.1 PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; P2 response regulator binding domain protein; KEGG: cth:Cthe_2284 chemotaxis protein CheAs; chemotaxis protein CheA 4819237 5295339 Cbei_4183 Clostridium beijerinckii NCIMB 8052 chemotaxis protein CheA YP_001311249.1 4817081 R 290402 CDS YP_001311250.1 150018996 5295340 complement(4819248..4819694) 1 NC_009617.1 PFAM: CheW domain protein; KEGG: cth:Cthe_2285 CheW protein; CheW protein 4819694 5295340 Cbei_4184 Clostridium beijerinckii NCIMB 8052 CheW protein YP_001311250.1 4819248 R 290402 CDS YP_001311251.1 150018997 5295341 complement(4820335..4821381) 1 NC_009617.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cac:CAC3650 HD-GYP domain containing protein; metal dependent phosphohydrolase 4821381 5295341 Cbei_4185 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001311251.1 4820335 R 290402 CDS YP_001311252.1 150018998 5295342 complement(4821648..4823336) 1 NC_009617.1 TIGRFAM: small GTP-binding protein; sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor, GTP-binding; KEGG: ftn:FTN_0927 sulfate adenylate transferase, subunit 1; sulfate adenylyltransferase, large subunit 4823336 5295342 Cbei_4186 Clostridium beijerinckii NCIMB 8052 sulfate adenylyltransferase, large subunit YP_001311252.1 4821648 R 290402 CDS YP_001311253.1 150018999 5295343 complement(4823338..4824237) 1 NC_009617.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 4824237 5295343 Cbei_4187 Clostridium beijerinckii NCIMB 8052 sulfate adenylyltransferase subunit 2 YP_001311253.1 4823338 R 290402 CDS YP_001311254.1 150019000 5295344 complement(4824310..4824627) 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cac:CAC0105 ferredoxin; 4Fe-4S ferredoxin 4824627 5295344 Cbei_4188 Clostridium beijerinckii NCIMB 8052 4Fe-4S ferredoxin YP_001311254.1 4824310 R 290402 CDS YP_001311255.1 150019001 5295345 complement(4824611..4826317) 1 NC_009617.1 catalyzes the reduction of adenosine 5'-phosphosulfate to AMP and sulfite; adenylylsulfate reductase subunit alpha 4826317 5295345 Cbei_4189 Clostridium beijerinckii NCIMB 8052 adenylylsulfate reductase subunit alpha YP_001311255.1 4824611 R 290402 CDS YP_001311256.1 150019002 5295346 complement(4826614..4827678) 1 NC_009617.1 TIGRFAM: sulfate ABC transporter ATPase subunit; PFAM: ABC transporter; Transport-associated OB domain protein; SMART: ATPase AAA; KEGG: syn:slr1455 ABC-type sulfate transport system ATP-binding protein; sulfate ABC transporter ATPase 4827678 5295346 Cbei_4190 Clostridium beijerinckii NCIMB 8052 sulfate ABC transporter ATPase YP_001311256.1 4826614 R 290402 CDS YP_001311257.1 150019003 5295347 complement(4827684..4828499) 1 NC_009617.1 TIGRFAM: sulfate ABC transporter inner membrane subunit; sulfate ABC transporter inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nmu:Nmul_A0504 sulfate ABC transporter permease CysW; sulfate ABC transporter permease 4828499 5295347 Cbei_4191 Clostridium beijerinckii NCIMB 8052 sulfate ABC transporter permease YP_001311257.1 4827684 R 290402 CDS YP_001311258.1 150019004 5295348 complement(4828527..4829351) 1 NC_009617.1 TIGRFAM: sulfate ABC transporter inner membrane subunit; sulfate ABC transporter inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bce:BC1092 sulfate transport system permease cysT; sulfate ABC transporter permease 4829351 5295348 Cbei_4192 Clostridium beijerinckii NCIMB 8052 sulfate ABC transporter permease YP_001311258.1 4828527 R 290402 CDS YP_001311259.1 150019005 5295349 complement(4829551..4830579) 1 NC_009617.1 TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: bca:BCE_1196 sulfate ABC transporter sulfate/thiosulfate-binding protein; sulfate ABC transporter substrate-binding protein 4830579 5295349 Cbei_4193 Clostridium beijerinckii NCIMB 8052 sulfate ABC transporter substrate-binding protein YP_001311259.1 4829551 R 290402 CDS YP_001311260.1 150019006 5295350 complement(4831135..4832181) 1 NC_009617.1 TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: bca:BCE_1196 sulfate ABC transporter sulfate/thiosulfate-binding protein; sulfate ABC transporter substrate-binding protein 4832181 5295350 Cbei_4194 Clostridium beijerinckii NCIMB 8052 sulfate ABC transporter substrate-binding protein YP_001311260.1 4831135 R 290402 CDS YP_001311261.1 150019007 5295351 complement(4832641..4832805) 1 NC_009617.1 hypothetical protein 4832805 5295351 Cbei_4195 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311261.1 4832641 R 290402 CDS YP_001311262.1 150019008 5295352 complement(4832869..4835019) 1 NC_009617.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: cth:Cthe_0618 ferrous iron transport protein B; ferrous iron transport protein B 4835019 5295352 Cbei_4196 Clostridium beijerinckii NCIMB 8052 ferrous iron transport protein B YP_001311262.1 4832869 R 290402 CDS YP_001311263.1 150019009 5295353 complement(4835094..4835315) 1 NC_009617.1 PFAM: FeoA family protein; KEGG: cth:Cthe_0619 FeoA; FeoA family protein 4835315 5295353 Cbei_4197 Clostridium beijerinckii NCIMB 8052 FeoA family protein YP_001311263.1 4835094 R 290402 CDS YP_001311264.1 150019010 5295354 complement(4835329..4835538) 1 NC_009617.1 PFAM: FeoA family protein; KEGG: mac:MA3478 hypothetical protein; FeoA family protein 4835538 5295354 Cbei_4198 Clostridium beijerinckii NCIMB 8052 FeoA family protein YP_001311264.1 4835329 R 290402 CDS YP_001311265.1 150019011 5295355 complement(4836342..4837550) 1 NC_009617.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 4837550 5295355 Cbei_4199 Clostridium beijerinckii NCIMB 8052 isocitrate dehydrogenase YP_001311265.1 4836342 R 290402 CDS YP_001311266.1 150019012 5295356 complement(4837873..4838667) 1 NC_009617.1 TIGRFAM: phage replisome organizer, KEGG: sac:SACOL0341 hypothetical protein; phage replisome organizer 4838667 5295356 Cbei_4200 Clostridium beijerinckii NCIMB 8052 phage replisome organizer YP_001311266.1 4837873 R 290402 CDS YP_001311267.1 150019013 5295357 complement(4839220..4839510) 1 NC_009617.1 hypothetical protein 4839510 5295357 Cbei_4201 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311267.1 4839220 R 290402 CDS YP_001311268.1 150019014 5295358 complement(4839679..4840596) 1 NC_009617.1 PFAM: Abortive infection protein; KEGG: tte:TTE0417 predicted metal-dependent membrane protease; abortive infection protein 4840596 5295358 Cbei_4202 Clostridium beijerinckii NCIMB 8052 abortive infection protein YP_001311268.1 4839679 R 290402 CDS YP_001311269.1 150019015 5295359 complement(4841316..4842788) 1 NC_009617.1 TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: syn:sll1027 NADH-dependent glutamate synthase small subunit; glutamate synthase NADH/NADPH small subunit 4842788 5295359 Cbei_4203 Clostridium beijerinckii NCIMB 8052 glutamate synthase NADH/NADPH small subunit YP_001311269.1 4841316 R 290402 CDS YP_001311270.1 150019016 5295360 complement(4842802..4847412) 1 NC_009617.1 PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: bha:BH1728 glutamate synthase (large subunit); glutamate synthase 4847412 5295360 Cbei_4204 Clostridium beijerinckii NCIMB 8052 glutamate synthase YP_001311270.1 4842802 R 290402 CDS YP_001311271.1 150019017 5295361 complement(4847552..4848112) 1 NC_009617.1 PFAM: ANTAR domain protein; KEGG: mta:Moth_1295 response regulator receiver (CheY-like) and ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein 4848112 5295361 Cbei_4205 Clostridium beijerinckii NCIMB 8052 response regulator receiver/ANTAR domain-containing protein YP_001311271.1 4847552 R 290402 CDS YP_001311272.1 150019018 5295362 complement(4848154..4849485) 1 NC_009617.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; KEGG: chy:CHY_0704 glutamine synthetase; glutamine synthetase, type I 4849485 5295362 Cbei_4206 Clostridium beijerinckii NCIMB 8052 glutamine synthetase, type I YP_001311272.1 4848154 R 290402 CDS YP_001311273.1 150019019 5295363 4851118..4852431 1 NC_009617.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive; aspartate kinase 4852431 5295363 Cbei_4207 Clostridium beijerinckii NCIMB 8052 aspartate kinase YP_001311273.1 4851118 D 290402 CDS YP_001311274.1 150019020 5295364 complement(4852756..4853409) 1 NC_009617.1 PFAM: SNARE associated Golgi protein; KEGG: cpf:CPF_1159 DedA protein; hypothetical protein 4853409 5295364 Cbei_4208 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311274.1 4852756 R 290402 CDS YP_001311275.1 150019021 5295365 complement(4853572..4856460) 1 NC_009617.1 PFAM: von Willebrand factor, type A; KEGG: cpr:CPR_2263 von Willebrand factor type A domain protein; von Willebrand factor, type A 4856460 5295365 Cbei_4209 Clostridium beijerinckii NCIMB 8052 von Willebrand factor, type A YP_001311275.1 4853572 R 290402 CDS YP_001311276.1 150019022 5295366 complement(4856522..4857091) 1 NC_009617.1 KEGG: cpr:CPR_2264 prepilin peptidase-dependent; hypothetical protein 4857091 5295366 Cbei_4210 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311276.1 4856522 R 290402 CDS YP_001311277.1 150019023 5295367 complement(4857107..4859587) 1 NC_009617.1 KEGG: cpr:CPR_2265 hypothetical protein; hypothetical protein 4859587 5295367 Cbei_4211 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311277.1 4857107 R 290402 CDS YP_001311278.1 150019024 5295368 complement(4859635..4860591) 1 NC_009617.1 hypothetical protein 4860591 5295368 Cbei_4212 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311278.1 4859635 R 290402 CDS YP_001311279.1 150019025 5295369 complement(4860638..4861972) 1 NC_009617.1 KEGG: cpe:CPE2281 type IV pilus assembly protein PilO; type IV pilus assembly protein PilO 4861972 5295369 Cbei_4213 Clostridium beijerinckii NCIMB 8052 type IV pilus assembly protein PilO YP_001311279.1 4860638 R 290402 CDS YP_001311280.1 150019026 5295370 complement(4861974..4862531) 1 NC_009617.1 PFAM: Fimbrial assembly family protein; KEGG: cno:NT01CX_1597 fimbrial assembly protein (PilN) superfamily; fimbrial assembly family protein 4862531 5295370 Cbei_4214 Clostridium beijerinckii NCIMB 8052 fimbrial assembly family protein YP_001311280.1 4861974 R 290402 CDS YP_001311281.1 150019027 5295371 complement(4862548..4863726) 1 NC_009617.1 TIGRFAM: type IV pilus assembly protein PilM; KEGG: cpe:CPE2283 probable fimbrial assembly protein; type IV pilus assembly protein PilM 4863726 5295371 Cbei_4215 Clostridium beijerinckii NCIMB 8052 type IV pilus assembly protein PilM YP_001311281.1 4862548 R 290402 CDS YP_001311282.1 150019028 5295372 complement(4863958..4864389) 1 NC_009617.1 KEGG: cpf:CPF_2567 type IV pilin; type IV pilin 4864389 5295372 Cbei_4216 Clostridium beijerinckii NCIMB 8052 type IV pilin YP_001311282.1 4863958 R 290402 CDS YP_001311283.1 150019029 5295373 complement(4864466..4865668) 1 NC_009617.1 PFAM: type II secretion system protein; KEGG: cpe:CPE2285 probable pilin biogenesis protein; type II secretion system protein 4865668 5295373 Cbei_4217 Clostridium beijerinckii NCIMB 8052 type II secretion system protein YP_001311283.1 4864466 R 290402 CDS YP_001311284.1 150019030 5295374 complement(4865772..4867466) 1 NC_009617.1 PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: ATPase AAA; KEGG: cpf:CPF_2570 secretion system protein E; type II secretion system protein E 4867466 5295374 Cbei_4218 Clostridium beijerinckii NCIMB 8052 type II secretion system protein E YP_001311284.1 4865772 R 290402 CDS YP_001311285.1 150019031 5295375 complement(4867581..4868333) 1 NC_009617.1 PFAM: peptidase A24A, prepilin type IV; peptidase A24A domain protein; KEGG: cpf:CPF_2571 type IV leader peptidase family protein; peptidase A24A domain-containing protein 4868333 5295375 Cbei_4219 Clostridium beijerinckii NCIMB 8052 peptidase A24A domain-containing protein YP_001311285.1 4867581 R 290402 CDS YP_001311286.1 150019032 5295376 complement(4869514..4869798) 1 NC_009617.1 hypothetical protein 4869798 5295376 Cbei_4220 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311286.1 4869514 R 290402 CDS YP_001311287.1 150019033 5295377 complement(4870256..4870708) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_0126 pneumococcal surface protein A; cell wall binding repeat-containing protein 4870708 5295377 Cbei_4221 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311287.1 4870256 R 290402 CDS YP_001311288.1 150019034 5295378 complement(4872246..4872983) 1 NC_009617.1 PFAM: protein of unknown function DUF28; KEGG: cpr:CPR_1922 conserved hypothetical protein TIGR01033; hypothetical protein 4872983 5295378 Cbei_4222 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311288.1 4872246 R 290402 CDS YP_001311289.1 150019035 5295379 complement(4873362..4874009) 1 NC_009617.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: cpe:CPE1955 hypothetical protein; hypothetical protein 4874009 5295379 Cbei_4223 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311289.1 4873362 R 290402 CDS YP_001311290.1 150019036 5295380 complement(4874388..4875830) 1 NC_009617.1 PFAM: GntR family transcriptional regulator; aminotransferase, class I and II; KEGG: cpr:CPR_1924 transcriptional regulator, GntR family/aminotransferase; GntR family transcriptional regulator 4875830 5295380 Cbei_4224 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001311290.1 4874388 R 290402 CDS YP_001311291.1 150019037 5295381 complement(4875858..4876778) 1 NC_009617.1 PFAM: DNA polymerase, beta domain protein region; KEGG: cno:NT01CX_1815 hypothetical protein; DNA polymerase subunit beta 4876778 5295381 Cbei_4225 Clostridium beijerinckii NCIMB 8052 DNA polymerase subunit beta YP_001311291.1 4875858 R 290402 CDS YP_001311292.1 150019038 5295382 complement(4877288..4877830) 1 NC_009617.1 KEGG: cpf:CPF_2214 hypothetical protein; hypothetical protein 4877830 5295382 Cbei_4226 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311292.1 4877288 R 290402 CDS YP_001311293.1 150019039 5295383 complement(4877912..4879702) 1 NC_009617.1 PFAM: GTP-binding protein, HSR1-related; KEGG: cpr:CPR_1927 GTP binding protein; HSR1-like GTP-binding protein 4879702 5295383 Cbei_4227 Clostridium beijerinckii NCIMB 8052 HSR1-like GTP-binding protein YP_001311293.1 4877912 R 290402 CDS YP_001311294.1 150019040 5295384 4880360..4880881 1 NC_009617.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: cpf:CPF_2216 hypoxanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 4880881 5295384 Cbei_4228 Clostridium beijerinckii NCIMB 8052 hypoxanthine phosphoribosyltransferase YP_001311294.1 4880360 D 290402 CDS YP_001311295.1 150019041 5295385 complement(4880961..4881632) 1 NC_009617.1 TIGRFAM: Sporulation protein YunB; KEGG: cpr:CPR_1929 sporulation protein YunB; sporulation protein YunB 4881632 5295385 Cbei_4229 Clostridium beijerinckii NCIMB 8052 sporulation protein YunB YP_001311295.1 4880961 R 290402 CDS YP_001311296.1 150019042 5295386 4881739..4884213 1 NC_009617.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; KEGG: cpf:CPF_2218 penicillin-binding protein, 1A family; 1A family penicillin-binding protein 4884213 5295386 Cbei_4230 Clostridium beijerinckii NCIMB 8052 1A family penicillin-binding protein YP_001311296.1 4881739 D 290402 CDS YP_001311297.1 150019043 5295387 complement(4884306..4885166) 1 NC_009617.1 hypothetical protein 4885166 5295387 Cbei_4231 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311297.1 4884306 R 290402 CDS YP_001311298.1 150019044 5295388 complement(4885530..4885937) 1 NC_009617.1 PFAM: nucleoside diphosphate kinase; KEGG: cno:NT01CX_0238 nucleoside diphosphate kinase (NDK) (NDP kinase)(nucleoside-2-P kinase); nucleoside-diphosphate kinase 4885937 5295388 Cbei_4232 Clostridium beijerinckii NCIMB 8052 nucleoside-diphosphate kinase YP_001311298.1 4885530 R 290402 CDS YP_001311299.1 150019045 5295389 4886375..4886647 1 NC_009617.1 PFAM: acylphosphatase; KEGG: bld:BLi00788 similar to proteins; RBL05910; acylphosphatase 4886647 5295389 Cbei_4233 Clostridium beijerinckii NCIMB 8052 acylphosphatase YP_001311299.1 4886375 D 290402 CDS YP_001311300.1 150019046 5295390 complement(4886720..4887454) 1 NC_009617.1 PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cno:NT01CX_1282 PHP family protein; hydrolase 4887454 5295390 Cbei_4234 Clostridium beijerinckii NCIMB 8052 hydrolase YP_001311300.1 4886720 R 290402 CDS YP_001311301.1 150019047 5295391 complement(4887985..4890186) 1 NC_009617.1 KEGG: ctc:CTC00839 cellulose synthase subunit domain; cellulose synthase 4890186 5295391 Cbei_4235 Clostridium beijerinckii NCIMB 8052 cellulose synthase YP_001311301.1 4887985 R 290402 CDS YP_001311302.1 150019048 5295392 complement(4890198..4891451) 1 NC_009617.1 PFAM: glycosyl transferase, family 2; KEGG: ctc:CTC00838 N-acetylglucosaminyltransferase; glycosyl transferase family protein 4891451 5295392 Cbei_4236 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001311302.1 4890198 R 290402 CDS YP_001311303.1 150019049 5295393 complement(4891456..4892736) 1 NC_009617.1 KEGG: lmf:LMOf2365_0557 hypothetical protein; hypothetical protein 4892736 5295393 Cbei_4237 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311303.1 4891456 R 290402 CDS YP_001311304.1 150019050 5295394 complement(4892720..4893574) 1 NC_009617.1 PFAM: GGDEF domain containing protein; KEGG: lmf:LMOf2365_0560 hypothetical protein; diguanylate cyclase 4893574 5295394 Cbei_4238 Clostridium beijerinckii NCIMB 8052 diguanylate cyclase YP_001311304.1 4892720 R 290402 CDS YP_001311305.1 150019051 5295395 complement(4894070..4895548) 1 NC_009617.1 KEGG: lin:lin0531 transmembrane protein; transmembrane protein 4895548 5295395 Cbei_4239 Clostridium beijerinckii NCIMB 8052 transmembrane protein YP_001311305.1 4894070 R 290402 CDS YP_001311306.1 150019052 5295396 4895743..4896516 1 NC_009617.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: cac:CAC0522 predicted hydrolase of the HAD superfamily; cof family hydrolase 4896516 5295396 Cbei_4240 Clostridium beijerinckii NCIMB 8052 cof family hydrolase YP_001311306.1 4895743 D 290402 CDS YP_001311307.1 150019053 5295397 complement(4897097..4898143) 1 NC_009617.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 4898143 5295397 Cbei_4241 Clostridium beijerinckii NCIMB 8052 DNA polymerase IV YP_001311307.1 4897097 R 290402 CDS YP_001311308.1 150019054 5295398 4898982..4899413 1 NC_009617.1 KEGG: cpf:CPF_2310 hypothetical protein; hypothetical protein 4899413 5295398 Cbei_4242 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311308.1 4898982 D 290402 CDS YP_001311309.1 150019055 5295399 complement(4899435..4902071) 1 NC_009617.1 TIGRFAM: ATPase P; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: cpr:CPR_2026 cation-transporting ATPase pacl; ATPase P 4902071 5295399 Cbei_4243 Clostridium beijerinckii NCIMB 8052 ATPase P YP_001311309.1 4899435 R 290402 CDS YP_001311310.1 150019056 5295400 complement(4902312..4902956) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: cpr:CPR_0150 hypothetical protein; cell wall binding repeat-containing protein 4902956 5295400 Cbei_4244 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311310.1 4902312 R 290402 CDS YP_001311311.1 150019057 5295401 complement(4903266..4904912) 1 NC_009617.1 catalyzes the hydrolysis of pyrophosphate to phosphate; manganese-dependent inorganic pyrophosphatase 4904912 5295401 Cbei_4245 Clostridium beijerinckii NCIMB 8052 manganese-dependent inorganic pyrophosphatase YP_001311311.1 4903266 R 290402 CDS YP_001311312.1 150019058 5295402 complement(4905244..4906011) 1 NC_009617.1 makes up the distal portion of the flagellar basal body rod; the Clostridia have 2 adjacent copies of the FlgG gene; flagellar basal body rod protein FlgG 4906011 flgG 5295402 flgG Clostridium beijerinckii NCIMB 8052 flagellar basal body rod protein FlgG YP_001311312.1 4905244 R 290402 CDS YP_001311313.1 150019059 5295403 complement(4906099..4906869) 1 NC_009617.1 makes up the distal portion of the flagellar basal body rod; the Clostridia have two adjacent copies of the FlgG gene; flagellar basal body rod protein FlgG 4906869 flgG 5295403 flgG Clostridium beijerinckii NCIMB 8052 flagellar basal body rod protein FlgG YP_001311313.1 4906099 R 290402 CDS YP_001311314.1 150019060 5295404 complement(4907065..4907685) 1 NC_009617.1 KEGG: cno:NT01CX_1924 hypothetical protein; hypothetical protein 4907685 5295404 Cbei_4248 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311314.1 4907065 R 290402 CDS YP_001311315.1 150019061 5295405 complement(4907965..4908693) 1 NC_009617.1 TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: cac:CAC2143 sigma factor of SigD/WhiG family; RNA polymerase sigma 28 subunit FliA/WhiG 4908693 5295405 Cbei_4249 Clostridium beijerinckii NCIMB 8052 RNA polymerase sigma 28 subunit FliA/WhiG YP_001311315.1 4907965 R 290402 CDS YP_001311316.1 150019062 5295406 complement(4908746..4909387) 1 NC_009617.1 PFAM: type IV pilus assembly PilZ; KEGG: cac:CAC2144 uncharacterized protein, YPFA B.subtilis ortholog; type IV pilus assembly PilZ 4909387 5295406 Cbei_4250 Clostridium beijerinckii NCIMB 8052 type IV pilus assembly PilZ YP_001311316.1 4908746 R 290402 CDS YP_001311317.1 150019063 5295407 complement(4909400..4910260) 1 NC_009617.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: cno:NT01CX_1921 ATPases involved in chromosome partitioning, MinD family; cobyrinic acid a,c-diamide synthase 4910260 5295407 Cbei_4251 Clostridium beijerinckii NCIMB 8052 cobyrinic acid a,c-diamide synthase YP_001311317.1 4909400 R 290402 CDS YP_001311318.1 150019064 5295408 complement(4910254..4911594) 1 NC_009617.1 positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 4911594 flhF 5295408 flhF Clostridium beijerinckii NCIMB 8052 flagellar biosynthesis regulator FlhF YP_001311318.1 4910254 R 290402 CDS YP_001311319.1 150019065 5295409 complement(4911595..4913661) 1 NC_009617.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 4913661 flhA 5295409 flhA Clostridium beijerinckii NCIMB 8052 flagellar biosynthesis protein FlhA YP_001311319.1 4911595 R 290402 CDS YP_001311320.1 150019066 5295410 complement(4913794..4915635) 1 NC_009617.1 FlhB is a membrane protein responsible for substrate specificity in switching from rod/hook-type export to filament-type export; FliR is required for export of flagellar proteins, although a specific role has not yet been determined; bifunctional flagellar biosynthesis protein FliR/FlhB 4915635 5295410 Cbei_4254 Clostridium beijerinckii NCIMB 8052 bifunctional flagellar biosynthesis protein FliR/FlhB YP_001311320.1 4913794 R 290402 CDS YP_001311321.1 150019067 5295411 complement(4915649..4915918) 1 NC_009617.1 PFAM: export protein FliQ, family 3; KEGG: cac:CAC2149 flagellar biosynthesis protein FliQ; export protein FliQ 4915918 5295411 Cbei_4255 Clostridium beijerinckii NCIMB 8052 export protein FliQ YP_001311321.1 4915649 R 290402 CDS YP_001311322.1 150019068 5295412 complement(4915930..4916709) 1 NC_009617.1 TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; KEGG: cno:NT01CX_1916 flagellar biosynthetic protein FliP; flagellar biosynthetic protein FliP 4916709 5295412 Cbei_4256 Clostridium beijerinckii NCIMB 8052 flagellar biosynthetic protein FliP YP_001311322.1 4915930 R 290402 CDS YP_001311323.1 150019069 5295413 complement(4916699..4917097) 1 NC_009617.1 KEGG: ctc:CTC01663 flagellar formation protein; flagellar formation protein 4917097 5295413 Cbei_4257 Clostridium beijerinckii NCIMB 8052 flagellar formation protein YP_001311323.1 4916699 R 290402 CDS YP_001311324.1 150019070 5295414 complement(4917107..4917592) 1 NC_009617.1 PFAM: flagellar basal body-associated protein FliL; KEGG: cac:CAC2152 flagellar protein FliL; flagellar basal body-associated protein FliL 4917592 5295414 Cbei_4258 Clostridium beijerinckii NCIMB 8052 flagellar basal body-associated protein FliL YP_001311324.1 4917107 R 290402 CDS YP_001311325.1 150019071 5295415 complement(4917672..4917863) 1 NC_009617.1 PFAM: flagellar FlbD family protein; KEGG: cno:NT01CX_1911 flagellar protein FlbD -related protein; flagellar FlbD family protein 4917863 5295415 Cbei_4259 Clostridium beijerinckii NCIMB 8052 flagellar FlbD family protein YP_001311325.1 4917672 R 290402 CDS YP_001311326.1 150019072 5295416 complement(4918115..4919206) 1 NC_009617.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: ctc:CTC01667 flagellar hook protein flgE; hypothetical protein 4919206 5295416 Cbei_4260 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311326.1 4918115 R 290402 CDS YP_001311327.1 150019073 5295417 complement(4919291..4919689) 1 NC_009617.1 TIGRFAM: flagellar operon protein; KEGG: cno:NT01CX_1909 hypothetical protein; flagellar operon protein 4919689 5295417 Cbei_4261 Clostridium beijerinckii NCIMB 8052 flagellar operon protein YP_001311327.1 4919291 R 290402 CDS YP_001311328.1 150019074 5295418 complement(4919690..4920709) 1 NC_009617.1 PFAM: flagellar hook capping protein; KEGG: cno:NT01CX_1908 flagellar hook assembly protein FlgD; flagellar hook capping protein 4920709 5295418 Cbei_4262 Clostridium beijerinckii NCIMB 8052 flagellar hook capping protein YP_001311328.1 4919690 R 290402 CDS YP_001311329.1 150019075 5295419 complement(4920721..4922067) 1 NC_009617.1 PFAM: flagellar hook-length control protein; KEGG: cac:CAC2157 flagellar hook-length control protein fliK; flagellar hook-length control protein 4922067 5295419 Cbei_4263 Clostridium beijerinckii NCIMB 8052 flagellar hook-length control protein YP_001311329.1 4920721 R 290402 CDS YP_001311330.1 150019076 5295420 complement(4922159..4922596) 1 NC_009617.1 TIGRFAM: flagellar export protein FliJ; KEGG: cno:NT01CX_1906 flagellar protein FliJ; flagellar export protein FliJ 4922596 5295420 Cbei_4264 Clostridium beijerinckii NCIMB 8052 flagellar export protein FliJ YP_001311330.1 4922159 R 290402 CDS YP_001311331.1 150019077 5295421 complement(4922732..4924048) 1 NC_009617.1 TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; SMART: ATPase AAA; KEGG: cno:NT01CX_1905 flagellum-specific ATP synthase; flagellar protein export ATPase FliI 4924048 5295421 Cbei_4265 Clostridium beijerinckii NCIMB 8052 flagellar protein export ATPase FliI YP_001311331.1 4922732 R 290402 CDS YP_001311332.1 150019078 5295422 complement(4924191..4924967) 1 NC_009617.1 KEGG: cac:CAC2160 flagellar assembly protein FliH; flagellar biosynthesis/type III secretory pathway protein-like protein 4924967 5295422 Cbei_4266 Clostridium beijerinckii NCIMB 8052 flagellar biosynthesis/type III secretory pathway protein-like protein YP_001311332.1 4924191 R 290402 CDS YP_001311333.1 150019079 5295423 complement(4924951..4925967) 1 NC_009617.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 4925967 fliG 5295423 fliG Clostridium beijerinckii NCIMB 8052 flagellar motor switch protein G YP_001311333.1 4924951 R 290402 CDS YP_001311334.1 150019080 5295424 complement(4925973..4927541) 1 NC_009617.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 4927541 fliF 5295424 fliF Clostridium beijerinckii NCIMB 8052 flagellar MS-ring protein YP_001311334.1 4925973 R 290402 CDS YP_001311335.1 150019081 5295425 complement(4927563..4927880) 1 NC_009617.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: cno:NT01CX_1901 flagellar hook-basal body complex protein (FliE); flagellar hook-basal body complex subunit FliE 4927880 5295425 Cbei_4269 Clostridium beijerinckii NCIMB 8052 flagellar hook-basal body complex subunit FliE YP_001311335.1 4927563 R 290402 CDS YP_001311336.1 150019082 5295426 complement(4927892..4928299) 1 NC_009617.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 4928299 flgC 5295426 flgC Clostridium beijerinckii NCIMB 8052 flagellar basal body rod protein FlgC YP_001311336.1 4927892 R 290402 CDS YP_001311337.1 150019083 5295427 complement(4928382..4928786) 1 NC_009617.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgB 4928786 flgB 5295427 flgB Clostridium beijerinckii NCIMB 8052 flagellar basal body rod protein FlgB YP_001311337.1 4928382 R 290402 CDS YP_001311338.1 150019084 5295428 complement(4929385..4930140) 1 NC_009617.1 PFAM: OmpA/MotB domain protein; KEGG: cac:CAC0305 chemotaxis motility protein B, gene motB; OmpA/MotB domain-containing protein 4930140 5295428 Cbei_4272 Clostridium beijerinckii NCIMB 8052 OmpA/MotB domain-containing protein YP_001311338.1 4929385 R 290402 CDS YP_001311339.1 150019085 5295429 complement(4930137..4930925) 1 NC_009617.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: cac:CAC0304 chemotaxis motility protein A, gene motA; MotA/TolQ/ExbB proton channel 4930925 5295429 Cbei_4273 Clostridium beijerinckii NCIMB 8052 MotA/TolQ/ExbB proton channel YP_001311339.1 4930137 R 290402 CDS YP_001311340.1 150019086 5295430 complement(4931357..4932193) 1 NC_009617.1 PFAM: flagellin domain protein; KEGG: ctc:CTC01679 flagellin; flagellin domain-containing protein 4932193 5295430 Cbei_4274 Clostridium beijerinckii NCIMB 8052 flagellin domain-containing protein YP_001311340.1 4931357 R 290402 CDS YP_001311341.1 150019087 5295431 4932998..4933567 1 NC_009617.1 hypothetical protein 4933567 5295431 Cbei_4275 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311341.1 4932998 D 290402 CDS YP_001311342.1 150019088 5295432 complement(4933638..4934858) 1 NC_009617.1 PFAM: protein of unknown function DUF115; KEGG: cno:NT01CX_1884 hypothetical protein; hypothetical protein 4934858 5295432 Cbei_4276 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311342.1 4933638 R 290402 CDS YP_001311343.1 150019089 5295433 complement(4934881..4935918) 1 NC_009617.1 KEGG: cac:CAC2186 glycosyltransferase; glycosyltransferase 4935918 5295433 Cbei_4277 Clostridium beijerinckii NCIMB 8052 glycosyltransferase YP_001311343.1 4934881 R 290402 CDS YP_001311344.1 150019090 5295434 complement(4935980..4937047) 1 NC_009617.1 PFAM: N-acetylneuraminic acid synthase, N-terminal domain; SAF domain; KEGG: cac:CAC2187 sialic acid synthase; N-acylneuraminate-9-phosphate synthase 4937047 5295434 Cbei_4278 Clostridium beijerinckii NCIMB 8052 N-acylneuraminate-9-phosphate synthase YP_001311344.1 4935980 R 290402 CDS YP_001311345.1 150019091 5295435 complement(4937095..4937490) 1 NC_009617.1 PFAM: MaoC domain protein dehydratase; KEGG: ctc:CTC00706 (de)hydratase mit MaoC domain; dehydratase 4937490 5295435 Cbei_4279 Clostridium beijerinckii NCIMB 8052 dehydratase YP_001311345.1 4937095 R 290402 CDS YP_001311346.1 150019092 5295436 complement(4937502..4938047) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gfo:orf2002 GNAT family acetyltransferase-possibly polyamine acetyltransferase; N-acetyltransferase GCN5 4938047 5295436 Cbei_4280 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001311346.1 4937502 R 290402 CDS YP_001311347.1 150019093 5295437 complement(4938050..4938787) 1 NC_009617.1 PFAM: acylneuraminate cytidylyltransferase; KEGG: cno:NT01CX_1888 spore coat polysaccharide biosynthesis protein SpsF; acylneuraminate cytidylyltransferase 4938787 5295437 Cbei_4281 Clostridium beijerinckii NCIMB 8052 acylneuraminate cytidylyltransferase YP_001311347.1 4938050 R 290402 CDS YP_001311348.1 150019094 5295438 complement(4938852..4939877) 1 NC_009617.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: ctc:CTC01712 UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase; polysaccharide biosynthesis protein CapD 4939877 5295438 Cbei_4282 Clostridium beijerinckii NCIMB 8052 polysaccharide biosynthesis protein CapD YP_001311348.1 4938852 R 290402 CDS YP_001311349.1 150019095 5295439 complement(4939922..4940272) 1 NC_009617.1 KEGG: cno:NT01CX_1885 hypothetical protein; hypothetical protein 4940272 5295439 Cbei_4283 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311349.1 4939922 R 290402 CDS YP_001311350.1 150019096 5295440 complement(4940304..4942037) 1 NC_009617.1 PFAM: protein of unknown function DUF115; KEGG: cno:NT01CX_1883 hypothetical protein; hypothetical protein 4942037 5295440 Cbei_4284 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311350.1 4940304 R 290402 CDS YP_001311351.1 150019097 5295441 complement(4942367..4943107) 1 NC_009617.1 KEGG: lca:LSEI_1352 predicted transposase; hypothetical protein 4943107 5295441 Cbei_4285 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311351.1 4942367 R 290402 CDS YP_001311352.1 150019098 5295442 complement(4943139..4943621) 1 NC_009617.1 KEGG: mbu:Mbur_0365 transposase; transposase 4943621 5295442 Cbei_4286 Clostridium beijerinckii NCIMB 8052 transposase YP_001311352.1 4943139 R 290402 CDS YP_001311353.1 150019099 5295443 4943741..4945036 1 NC_009617.1 PFAM: Integrase, catalytic region; KEGG: llm:llmg_1075 transposase for insertion sequence element IS712E; integrase catalytic subunit 4945036 5295443 Cbei_4287 Clostridium beijerinckii NCIMB 8052 integrase catalytic subunit YP_001311353.1 4943741 D 290402 CDS YP_001311354.1 150019100 5295444 4945029..4945781 1 NC_009617.1 PFAM: IstB domain protein ATP-binding protein; SMART: ATPase AAA; KEGG: mac:MA4529 IstB helper protein; IstB ATP binding domain-containing protein 4945781 5295444 Cbei_4288 Clostridium beijerinckii NCIMB 8052 IstB ATP binding domain-containing protein YP_001311354.1 4945029 D 290402 CDS YP_001311355.1 150019101 5295445 complement(4946254..4947063) 1 NC_009617.1 PFAM: flagellin domain protein; KEGG: cno:NT01CX_1882 flagellin protein FliB(A); flagellin domain-containing protein 4947063 5295445 Cbei_4289 Clostridium beijerinckii NCIMB 8052 flagellin domain-containing protein YP_001311355.1 4946254 R 290402 CDS YP_001311356.1 150019102 5295446 complement(4947213..4947542) 1 NC_009617.1 KEGG: cac:CAC2204 hypothetical protein; hypothetical protein 4947542 5295446 Cbei_4290 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311356.1 4947213 R 290402 CDS YP_001311357.1 150019103 5295447 complement(4947583..4949160) 1 NC_009617.1 PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; KEGG: bsu:BG10921 flagellar hook-associated protein 2 (HAP2); flagellar hook-associated 2 domain-containing protein 4949160 5295447 Cbei_4291 Clostridium beijerinckii NCIMB 8052 flagellar hook-associated 2 domain-containing protein YP_001311357.1 4947583 R 290402 CDS YP_001311358.1 150019104 5295448 complement(4949209..4949589) 1 NC_009617.1 PFAM: flagellar protein FliS; KEGG: ctc:CTC01719 flagellar protein fliS; flagellar protein FliS 4949589 5295448 Cbei_4292 Clostridium beijerinckii NCIMB 8052 flagellar protein FliS YP_001311358.1 4949209 R 290402 CDS YP_001311359.1 150019105 5295449 complement(4949601..4949888) 1 NC_009617.1 KEGG: cno:NT01CX_1877 hypothetical protein; hypothetical protein 4949888 5295449 Cbei_4293 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311359.1 4949601 R 290402 CDS YP_001311360.1 150019106 5295450 complement(4949941..4950315) 1 NC_009617.1 PFAM: flagellar protein FlaG protein; KEGG: cac:CAC2208 flagellin family protein, YvyC B.subtilis ortholog; flagellar protein FlaG protein 4950315 5295450 Cbei_4294 Clostridium beijerinckii NCIMB 8052 flagellar protein FlaG protein YP_001311360.1 4949941 R 290402 CDS YP_001311361.1 150019107 5295451 complement(4950359..4950577) 1 NC_009617.1 PFAM: carbon storage regulator; KEGG: cno:NT01CX_1875 carbon storage regulator; carbon storage regulator CsrA 4950577 5295451 Cbei_4295 Clostridium beijerinckii NCIMB 8052 carbon storage regulator CsrA YP_001311361.1 4950359 R 290402 CDS YP_001311362.1 150019108 5295452 complement(4950582..4951007) 1 NC_009617.1 binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW 4951007 5295452 Cbei_4296 Clostridium beijerinckii NCIMB 8052 flagellar assembly protein FliW YP_001311362.1 4950582 R 290402 CDS YP_001311363.1 150019109 5295453 complement(4951028..4952011) 1 NC_009617.1 TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: cno:NT01CX_1873 flagellar hook-associated protein 3; flagellar hook-associated protein 3 4952011 5295453 Cbei_4297 Clostridium beijerinckii NCIMB 8052 flagellar hook-associated protein 3 YP_001311363.1 4951028 R 290402 CDS YP_001311364.1 150019110 5295454 complement(4952124..4953875) 1 NC_009617.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: ctc:CTC01724 flagellar hook-associated protein 1; flagellar hook-associated protein FlgK 4953875 5295454 Cbei_4298 Clostridium beijerinckii NCIMB 8052 flagellar hook-associated protein FlgK YP_001311364.1 4952124 R 290402 CDS YP_001311365.1 150019111 5295455 complement(4954032..4954442) 1 NC_009617.1 PFAM: FlgN family protein; KEGG: ctc:CTC01725 hypothetical protein; FlgN family protein 4954442 5295455 Cbei_4299 Clostridium beijerinckii NCIMB 8052 FlgN family protein YP_001311365.1 4954032 R 290402 CDS YP_001311366.1 150019112 5295456 complement(4954445..4954720) 1 NC_009617.1 PFAM: Anti-sigma-28 factor, FlgM family protein; KEGG: cac:CAC2214 regulator of flagellin synthesis, FLGM; anti-sigma-28 factor FlgM 4954720 5295456 Cbei_4300 Clostridium beijerinckii NCIMB 8052 anti-sigma-28 factor FlgM YP_001311366.1 4954445 R 290402 CDS YP_001311367.1 150019113 5295457 complement(4954897..4955709) 1 NC_009617.1 TIGRFAM: phage replisome organizer, KEGG: lmo:lmo2317 similar to protein gp49; phage replisome organizer 4955709 5295457 Cbei_4301 Clostridium beijerinckii NCIMB 8052 phage replisome organizer YP_001311367.1 4954897 R 290402 CDS YP_001311368.1 150019114 5295458 complement(4955939..4957135) 1 NC_009617.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 4957135 5295458 Cbei_4302 Clostridium beijerinckii NCIMB 8052 flagellar motor switch protein YP_001311368.1 4955939 R 290402 CDS YP_001311369.1 150019115 5295459 complement(4957119..4958117) 1 NC_009617.1 PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: cno:NT01CX_1868 flagellar motor switch protein FliM; flagellar motor switch protein FliM 4958117 5295459 Cbei_4303 Clostridium beijerinckii NCIMB 8052 flagellar motor switch protein FliM YP_001311369.1 4957119 R 290402 CDS YP_001311370.1 150019116 5295460 complement(4958140..4958541) 1 NC_009617.1 PFAM: CheW domain protein; KEGG: cno:NT01CX_1867 chemotaxis signal transduction protein CheW; CheW protein 4958541 5295460 Cbei_4304 Clostridium beijerinckii NCIMB 8052 CheW protein YP_001311370.1 4958140 R 290402 CDS YP_001311371.1 150019117 5295461 complement(4958671..4959030) 1 NC_009617.1 PFAM: response regulator receiver; KEGG: ctc:CTC01729 chemotaxis protein cheY; response regulator receiver protein 4959030 5295461 Cbei_4305 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001311371.1 4958671 R 290402 CDS YP_001311372.1 150019118 5295462 complement(4959050..4959652) 1 NC_009617.1 PFAM: CheC domain protein; KEGG: cac:CAC2219 chemotaxis protein CheC; chemotaxis protein CheC 4959652 5295462 Cbei_4306 Clostridium beijerinckii NCIMB 8052 chemotaxis protein CheC YP_001311372.1 4959050 R 290402 CDS YP_001311373.1 150019119 5295463 complement(4959847..4961910) 1 NC_009617.1 PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; P2 response regulator binding domain protein; KEGG: cno:NT01CX_1864 chemotaxis protein CheA; chemotaxis protein CheA 4961910 5295463 Cbei_4307 Clostridium beijerinckii NCIMB 8052 chemotaxis protein CheA YP_001311373.1 4959847 R 290402 CDS YP_001311374.1 150019120 5295464 complement(4961979..4962692) 1 NC_009617.1 PFAM: MCP methyltransferase, CheR-type; KEGG: cno:NT01CX_1863 chemotaxis protein methyltransferase CheR; protein-glutamate O-methyltransferase 4962692 5295464 Cbei_4308 Clostridium beijerinckii NCIMB 8052 protein-glutamate O-methyltransferase YP_001311374.1 4961979 R 290402 CDS YP_001311375.1 150019121 5295465 complement(4962701..4963807) 1 NC_009617.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: cno:NT01CX_1862 protein-glutamate methylesterase CheB; response regulator receiver modulated CheB methylesterase 4963807 5295465 Cbei_4309 Clostridium beijerinckii NCIMB 8052 response regulator receiver modulated CheB methylesterase YP_001311375.1 4962701 R 290402 CDS YP_001311376.1 150019122 5295466 complement(4963831..4964319) 1 NC_009617.1 catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD 4964319 5295466 Cbei_4310 Clostridium beijerinckii NCIMB 8052 chemoreceptor glutamine deamidase CheD YP_001311376.1 4963831 R 290402 CDS YP_001311377.1 150019123 5295467 complement(4964329..4964778) 1 NC_009617.1 PFAM: CheW domain protein; KEGG: cno:NT01CX_1860 chemotaxis protein CheW; CheW protein 4964778 5295467 Cbei_4311 Clostridium beijerinckii NCIMB 8052 CheW protein YP_001311377.1 4964329 R 290402 CDS YP_001311378.1 150019124 5295468 complement(4964793..4966742) 1 NC_009617.1 PFAM: protein of unknown function DUF342; KEGG: cno:NT01CX_1859 hypothetical protein; hypothetical protein 4966742 5295468 Cbei_4312 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311378.1 4964793 R 290402 CDS YP_001311379.1 150019125 5295469 complement(4966861..4967595) 1 NC_009617.1 PFAM: aminotransferase, class IV; KEGG: cac:CAC2226 enzyme of IlvE/PabC family (branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase); class IV aminotransferase 4967595 5295469 Cbei_4313 Clostridium beijerinckii NCIMB 8052 class IV aminotransferase YP_001311379.1 4966861 R 290402 CDS YP_001311380.1 150019126 5295470 complement(4967869..4968507) 1 NC_009617.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: cpf:CPF_2313 HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD family hydrolase 4968507 5295470 Cbei_4314 Clostridium beijerinckii NCIMB 8052 HAD family hydrolase YP_001311380.1 4967869 R 290402 CDS YP_001311381.1 150019127 5295471 complement(4969048..4970430) 1 NC_009617.1 PFAM: transposase, IS4 family protein; KEGG: wol:WD0563 transposase, IS4 family; transposase, IS4 family protein 4970430 5295471 Cbei_4315 Clostridium beijerinckii NCIMB 8052 transposase, IS4 family protein YP_001311381.1 4969048 R 290402 CDS YP_001311382.1 150019128 5295472 complement(4970836..4972029) 1 NC_009617.1 PFAM: aminotransferase, class I and II; KEGG: ctc:CTC01294 aspartate aminotransferase; class I and II aminotransferase 4972029 5295472 Cbei_4316 Clostridium beijerinckii NCIMB 8052 class I and II aminotransferase YP_001311382.1 4970836 R 290402 CDS YP_001311383.1 150019129 5295473 complement(4972413..4972748) 1 NC_009617.1 KEGG: cno:NT01CX_1855 hypothetical protein; hypothetical protein 4972748 5295473 Cbei_4317 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311383.1 4972413 R 290402 CDS YP_001311384.1 150019130 5295474 complement(4973128..4976637) 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cpf:CPF_2318 pyruvate-flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 4976637 5295474 Cbei_4318 Clostridium beijerinckii NCIMB 8052 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_001311384.1 4973128 R 290402 CDS YP_001311385.1 150019131 5295475 complement(4976788..4977219) 1 NC_009617.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 4977219 5295475 Cbei_4319 Clostridium beijerinckii NCIMB 8052 flavodoxin YP_001311385.1 4976788 R 290402 CDS YP_001311386.1 150019132 5295476 complement(4977369..4978448) 1 NC_009617.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 4978448 murG 5295476 murG Clostridium beijerinckii NCIMB 8052 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase YP_001311386.1 4977369 R 290402 CDS YP_001311387.1 150019133 5295477 complement(4978536..4980302) 1 NC_009617.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: cac:CAC2232 SsDNA exonuclease, RecJ; single-stranded-DNA-specific exonuclease RecJ 4980302 5295477 Cbei_4321 Clostridium beijerinckii NCIMB 8052 single-stranded-DNA-specific exonuclease RecJ YP_001311387.1 4978536 R 290402 CDS YP_001311388.1 150019134 5295478 complement(4980441..4980992) 1 NC_009617.1 TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; KEGG: cpe:CPE2067 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein; DJ-1 family protein 4980992 5295478 Cbei_4322 Clostridium beijerinckii NCIMB 8052 DJ-1 family protein YP_001311388.1 4980441 R 290402 CDS YP_001311389.1 150019135 5295479 complement(4981463..4984375) 1 NC_009617.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 4984375 5295479 Cbei_4323 Clostridium beijerinckii NCIMB 8052 DNA topoisomerase IV subunit A YP_001311389.1 4981463 R 290402 CDS YP_001311390.1 150019136 5295480 complement(4984507..4986456) 1 NC_009617.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 4986456 5295480 Cbei_4324 Clostridium beijerinckii NCIMB 8052 DNA topoisomerase IV subunit B YP_001311390.1 4984507 R 290402 CDS YP_001311391.1 150019137 5295481 complement(4986900..4988288) 1 NC_009617.1 PFAM: glycosyl transferase, family 2; KEGG: cpr:CPR_2042 glycosyl transferase, group 2 family protein; glycosyl transferase family protein 4988288 5295481 Cbei_4325 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001311391.1 4986900 R 290402 CDS YP_001311392.1 150019138 5295482 complement(4988509..4989495) 1 NC_009617.1 PFAM: Rhomboid family protein; KEGG: ctc:CTC00530 conserved membrane protein (rhomboid family); rhomboid family protein 4989495 5295482 Cbei_4326 Clostridium beijerinckii NCIMB 8052 rhomboid family protein YP_001311392.1 4988509 R 290402 CDS YP_001311393.1 150019139 5295483 complement(4989746..4991530) 1 NC_009617.1 TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; Oligopeptidase F; KEGG: cno:NT01CX_1564 oligoendopeptidase F; oligoendopeptidase F 4991530 5295483 Cbei_4327 Clostridium beijerinckii NCIMB 8052 oligoendopeptidase F YP_001311393.1 4989746 R 290402 CDS YP_001311394.1 150019140 5295484 complement(4991660..4992061) 1 NC_009617.1 KEGG: cpf:CPF_1707 hypothetical protein; hypothetical protein 4992061 5295484 Cbei_4328 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311394.1 4991660 R 290402 CDS YP_001311395.1 150019141 5295485 4992473..4992886 1 NC_009617.1 KEGG: cpf:CPF_1708 hypothetical protein; hypothetical protein 4992886 5295485 Cbei_4329 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311395.1 4992473 D 290402 CDS YP_001311396.1 150019142 5295486 complement(4993436..4993663) 1 NC_009617.1 TIGRFAM: D-alanyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: dsy:DSY0223 hypothetical protein; D-alanyl carrier protein 4993663 5295486 Cbei_4330 Clostridium beijerinckii NCIMB 8052 D-alanyl carrier protein YP_001311396.1 4993436 R 290402 CDS YP_001311397.1 150019143 5295487 complement(4993720..4994874) 1 NC_009617.1 PFAM: membrane bound O-acyl transferase, MBOAT family protein; KEGG: dsy:DSY0222 hypothetical protein; membrane bound O-acyl transferase, MBOAT family protein 4994874 5295487 Cbei_4331 Clostridium beijerinckii NCIMB 8052 membrane bound O-acyl transferase, MBOAT family protein YP_001311397.1 4993720 R 290402 CDS YP_001311398.1 150019144 5295488 complement(4994874..4996388) 1 NC_009617.1 TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; KEGG: dsy:DSY0221 hypothetical protein; amino acid adenylation domain-containing protein 4996388 5295488 Cbei_4332 Clostridium beijerinckii NCIMB 8052 amino acid adenylation domain-containing protein YP_001311398.1 4994874 R 290402 CDS YP_001311399.1 150019145 5295489 complement(4996509..4997693) 1 NC_009617.1 PFAM: DltD, C-terminal domain protein; DltD, central domain protein; KEGG: dsy:DSY0224 hypothetical protein; DltD C-terminal domain-containing protein 4997693 5295489 Cbei_4333 Clostridium beijerinckii NCIMB 8052 DltD C-terminal domain-containing protein YP_001311399.1 4996509 R 290402 CDS YP_001311400.1 150019146 5295490 4997975..4998646 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ctc:CTC02361 high-affinity Zinc uptake system ATP-binding protein znuC; ABC transporter 4998646 5295490 Cbei_4334 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001311400.1 4997975 D 290402 CDS YP_001311401.1 150019147 5295491 4998680..4999480 1 NC_009617.1 PFAM: ABC transporter; KEGG: cpr:CPR_1443 metal (zinc) transport protein (ABC transporter permease) ZurM; ABC transporter 4999480 5295491 Cbei_4335 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001311401.1 4998680 D 290402 CDS YP_001311402.1 150019148 5295492 complement(4999497..5000672) 1 NC_009617.1 PFAM: aminotransferase, class V; KEGG: tde:TDE1415 nucleotidyl transferase/aminotransferase, class V; class V aminotransferase 5000672 5295492 Cbei_4336 Clostridium beijerinckii NCIMB 8052 class V aminotransferase YP_001311402.1 4999497 R 290402 CDS YP_001311403.1 150019149 5295493 complement(5000678..5001811) 1 NC_009617.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: tde:TDE1414 phosphonopyruvate decarboxylase; thiamine pyrophosphate binding domain-containing protein 5001811 5295493 Cbei_4337 Clostridium beijerinckii NCIMB 8052 thiamine pyrophosphate binding domain-containing protein YP_001311403.1 5000678 R 290402 CDS YP_001311404.1 150019150 5295494 complement(5001943..5003241) 1 NC_009617.1 TIGRFAM: cytidyltransferase-related domain; PFAM: cytidylyltransferase; KEGG: bfr:BF2578 phosphoenolpyruvate phosphomutase; cytidyltransferase-like protein 5003241 5295494 Cbei_4338 Clostridium beijerinckii NCIMB 8052 cytidyltransferase-like protein YP_001311404.1 5001943 R 290402 CDS YP_001311405.1 150019151 5295495 complement(5003349..5004140) 1 NC_009617.1 PFAM: Nucleotidyl transferase; KEGG: ctc:CTC01704 nucleotidyl transferase; nucleotidyl transferase 5004140 5295495 Cbei_4339 Clostridium beijerinckii NCIMB 8052 nucleotidyl transferase YP_001311405.1 5003349 R 290402 CDS YP_001311406.1 150019152 5295496 complement(5004461..5005459) 1 NC_009617.1 hypothetical protein 5005459 5295496 Cbei_4340 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311406.1 5004461 R 290402 CDS YP_001311407.1 150019153 5295497 complement(5005766..5006425) 1 NC_009617.1 KEGG: cno:NT01CX_2433 hypothetical protein; hypothetical protein 5006425 5295497 Cbei_4341 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311407.1 5005766 R 290402 CDS YP_001311408.1 150019154 5295498 complement(5006584..5007438) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: btk:BT9727_3965 ABC transporter ATP-binding protein; ABC transporter 5007438 5295498 Cbei_4342 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001311408.1 5006584 R 290402 CDS YP_001311409.1 150019155 5295499 complement(5007616..5007996) 1 NC_009617.1 PFAM: GntR family transcriptional regulator; KEGG: cno:NT01CX_2435 transcriptional regulator, GntR family; GntR family transcriptional regulator 5007996 5295499 Cbei_4343 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001311409.1 5007616 R 290402 CDS YP_001311410.1 150019156 5295500 complement(5008156..5009559) 1 NC_009617.1 PFAM: sodium:dicarboxylate symporter; KEGG: cjj:CJJ81176_0052 sodium/dicarboxylate symporter; sodium:dicarboxylate symporter 5009559 5295500 Cbei_4344 Clostridium beijerinckii NCIMB 8052 sodium:dicarboxylate symporter YP_001311410.1 5008156 R 290402 CDS YP_001311411.1 150019157 5295501 complement(5009823..5010758) 1 NC_009617.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: gvi:gll3978 unknown protein; succinylglutamate desuccinylase/aspartoacylase 5010758 5295501 Cbei_4345 Clostridium beijerinckii NCIMB 8052 succinylglutamate desuccinylase/aspartoacylase YP_001311411.1 5009823 R 290402 CDS YP_001311412.1 150019158 5295502 complement(5010755..5011690) 1 NC_009617.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: gvi:gll3979 unknown protein; succinylglutamate desuccinylase/aspartoacylase 5011690 5295502 Cbei_4346 Clostridium beijerinckii NCIMB 8052 succinylglutamate desuccinylase/aspartoacylase YP_001311412.1 5010755 R 290402 CDS YP_001311413.1 150019159 5295503 complement(5011910..5013250) 1 NC_009617.1 TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; KEGG: cac:CAC1427 4-aminobutyrate aminotransferase (PLP-dependent); 4-aminobutyrate aminotransferase 5013250 5295503 Cbei_4347 Clostridium beijerinckii NCIMB 8052 4-aminobutyrate aminotransferase YP_001311413.1 5011910 R 290402 CDS YP_001311414.1 150019160 5295504 complement(5013544..5014761) 1 NC_009617.1 PFAM: purine catabolism PurC domain protein; KEGG: cac:CAC1426 possible transcriptional regulator from leucine-rich protein (LRPR) family; PucR family transcriptional regulator 5014761 5295504 Cbei_4348 Clostridium beijerinckii NCIMB 8052 PucR family transcriptional regulator YP_001311414.1 5013544 R 290402 CDS YP_001311415.1 150019161 5295505 complement(5015078..5015785) 1 NC_009617.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB1005 glutamine ABC transporter permease; polar amino acid ABC transporter inner membrane subunit 5015785 5295505 Cbei_4349 Clostridium beijerinckii NCIMB 8052 polar amino acid ABC transporter inner membrane subunit YP_001311415.1 5015078 R 290402 CDS YP_001311416.1 150019162 5295506 complement(5015844..5016728) 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 3; KEGG: bja:blr2224 ABC transporter amino acid-binding protein; extracellular solute-binding protein 5016728 5295506 Cbei_4350 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001311416.1 5015844 R 290402 CDS YP_001311417.1 150019163 5295507 complement(5016810..5017535) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mma:MM1941 glutamine transporter ATP-binding protein; ABC transporter 5017535 5295507 Cbei_4351 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001311417.1 5016810 R 290402 CDS YP_001311418.1 150019164 5295508 complement(5017816..5018610) 1 NC_009617.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: spo:SPCC965.09 hypothetical protein; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 5018610 5295508 Cbei_4352 Clostridium beijerinckii NCIMB 8052 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001311418.1 5017816 R 290402 CDS YP_001311419.1 150019165 5295509 complement(5018591..5020036) 1 NC_009617.1 PFAM: amino acid permease-associated region; KEGG: cac:CAC0852 amino acid permease; amino acid permease-associated protein 5020036 5295509 Cbei_4353 Clostridium beijerinckii NCIMB 8052 amino acid permease-associated protein YP_001311419.1 5018591 R 290402 CDS YP_001311420.1 150019166 5295510 complement(5020143..5021273) 1 NC_009617.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: aae:aq_1145 1,3 propanediol dehydrogenase; iron-containing alcohol dehydrogenase 5021273 5295510 Cbei_4354 Clostridium beijerinckii NCIMB 8052 iron-containing alcohol dehydrogenase YP_001311420.1 5020143 R 290402 CDS YP_001311421.1 150019167 5295511 5021644..5022054 1 NC_009617.1 KEGG: ctc:CTC02534 hypothetical protein; hypothetical protein 5022054 5295511 Cbei_4355 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311421.1 5021644 D 290402 CDS YP_001311422.1 150019168 5295512 complement(5022494..5023429) 1 NC_009617.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein, beta subunit; KEGG: cth:Cthe_1840 cysteine synthase A; cysteine synthase A 5023429 5295512 Cbei_4356 Clostridium beijerinckii NCIMB 8052 cysteine synthase A YP_001311422.1 5022494 R 290402 CDS YP_001311423.1 150019169 5295513 complement(5023873..5024394) 1 NC_009617.1 PFAM: nitroreductase; KEGG: bth:BT_1148 NADH dehydrogenase/NAD(P)H nitroreductase; nitroreductase 5024394 5295513 Cbei_4357 Clostridium beijerinckii NCIMB 8052 nitroreductase YP_001311423.1 5023873 R 290402 CDS YP_001311424.1 150019170 5295514 complement(5024542..5025381) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: cpr:CPR_0474 transcriptional regulator, AraC family; AraC family transcriptional regulator 5025381 5295514 Cbei_4358 Clostridium beijerinckii NCIMB 8052 AraC family transcriptional regulator YP_001311424.1 5024542 R 290402 CDS YP_001311425.1 150019171 5295515 5025619..5026941 1 NC_009617.1 PFAM: glycoside hydrolase, family 4; KEGG: bha:BH2228 melibiase (alpha-galactosidase); glycoside hydrolase 5026941 5295515 Cbei_4359 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001311425.1 5025619 D 290402 CDS YP_001311426.1 150019172 5295516 complement(5027124..5027444) 1 NC_009617.1 PFAM: Domain of unknown function DUF1874; KEGG: bsu:BG12113 hypothetical protein; hypothetical protein 5027444 5295516 Cbei_4360 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311426.1 5027124 R 290402 CDS YP_001311427.1 150019173 5295517 complement(5027636..5028658) 1 NC_009617.1 PFAM: Radical SAM domain protein; KEGG: ctc:CTC00900 spore photoproduct lyase; radical SAM domain-containing protein 5028658 5295517 Cbei_4361 Clostridium beijerinckii NCIMB 8052 radical SAM domain-containing protein YP_001311427.1 5027636 R 290402 CDS YP_001311428.1 150019174 5295518 complement(5028789..5029307) 1 NC_009617.1 hypothetical protein 5029307 5295518 Cbei_4362 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311428.1 5028789 R 290402 CDS YP_001311429.1 150019175 5295519 5029782..5030252 1 NC_009617.1 hypothetical protein 5030252 5295519 Cbei_4363 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311429.1 5029782 D 290402 CDS YP_001311430.1 150019176 5295520 5030268..5030573 1 NC_009617.1 KEGG: nfa:nfa56440 hypothetical protein; hypothetical protein 5030573 5295520 Cbei_4364 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311430.1 5030268 D 290402 CDS YP_001311431.1 150019177 5295521 5030981..5032198 1 NC_009617.1 KEGG: cac:CAC0208 predicted membrane protein; CF-20 family; hypothetical protein 5032198 5295521 Cbei_4365 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311431.1 5030981 D 290402 CDS YP_001311432.1 150019178 5295522 complement(5032516..5033652) 1 NC_009617.1 KEGG: cac:CAC0753 polyA polymerase related protein (HD hydrolase) and P-loop ATP-ase domain; PolyA polymerase-like protein 5033652 5295522 Cbei_4366 Clostridium beijerinckii NCIMB 8052 PolyA polymerase-like protein YP_001311432.1 5032516 R 290402 CDS YP_001311433.1 150019179 5295523 complement(5033656..5034459) 1 NC_009617.1 KEGG: cac:CAC0752 homolog of eukaryotic DNA ligase III; DNA ligase-like protein 5034459 5295523 Cbei_4367 Clostridium beijerinckii NCIMB 8052 DNA ligase-like protein YP_001311433.1 5033656 R 290402 CDS YP_001311434.1 150019180 5295524 complement(5035332..5035685) 1 NC_009617.1 KEGG: dsy:DSY4340 hypothetical protein; hypothetical protein 5035685 5295524 Cbei_4368 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311434.1 5035332 R 290402 CDS YP_001311435.1 150019181 5295525 complement(5036156..5036992) 1 NC_009617.1 KEGG: cpe:CPE0425 hypothetical protein; hypothetical protein 5036992 5295525 Cbei_4369 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311435.1 5036156 R 290402 CDS YP_001311436.1 150019182 5295526 complement(5037239..5037949) 1 NC_009617.1 PFAM: Endonuclease V; KEGG: cac:CAC0363 deoxyinosine 3'endonuclease; deoxyribonuclease V 5037949 5295526 Cbei_4370 Clostridium beijerinckii NCIMB 8052 deoxyribonuclease V YP_001311436.1 5037239 R 290402 CDS YP_001311437.1 150019183 5295527 complement(5038582..5039028) 1 NC_009617.1 KEGG: btk:BT9727_3064 hypothetical protein; hypothetical protein 5039028 5295527 Cbei_4371 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311437.1 5038582 R 290402 CDS YP_001311438.1 150019184 5295528 complement(5039044..5039283) 1 NC_009617.1 hypothetical protein 5039283 5295528 Cbei_4372 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311438.1 5039044 R 290402 CDS YP_001311439.1 150019185 5295529 complement(5039299..5039703) 1 NC_009617.1 KEGG: btk:BT9727_3065 hypothetical protein; hypothetical protein 5039703 5295529 Cbei_4373 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311439.1 5039299 R 290402 CDS YP_001311440.1 150019186 5296437 complement(5040486..5041070) 1 NC_009617.1 hypothetical protein 5041070 5296437 Cbei_4375 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311440.1 5040486 R 290402 CDS YP_001311441.1 150019187 5295531 complement(5041085..5048746) 1 NC_009617.1 TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: cth:Cthe_0009 YD repeat containing protein; YD repeat-containing protein 5048746 5295531 Cbei_4376 Clostridium beijerinckii NCIMB 8052 YD repeat-containing protein YP_001311441.1 5041085 R 290402 CDS YP_001311442.1 150019188 5295532 complement(5048936..5049709) 1 NC_009617.1 hypothetical protein 5049709 5295532 Cbei_4377 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311442.1 5048936 R 290402 CDS YP_001311443.1 150019189 5295533 complement(5049712..5050233) 1 NC_009617.1 hypothetical protein 5050233 5295533 Cbei_4378 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311443.1 5049712 R 290402 CDS YP_001311444.1 150019190 5295534 complement(5050230..5051324) 1 NC_009617.1 PFAM: pentapeptide repeat protein; KEGG: ddi:DDBDRAFT_0216618 hypothetical protein; pentapeptide repeat-containing protein 5051324 5295534 Cbei_4379 Clostridium beijerinckii NCIMB 8052 pentapeptide repeat-containing protein YP_001311444.1 5050230 R 290402 CDS YP_001311445.1 150019191 5295535 complement(5051390..5052832) 1 NC_009617.1 hypothetical protein 5052832 5295535 Cbei_4380 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311445.1 5051390 R 290402 CDS YP_001311446.1 150019192 5295536 complement(5052920..5053537) 1 NC_009617.1 hypothetical protein 5053537 5295536 Cbei_4381 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311446.1 5052920 R 290402 CDS YP_001311447.1 150019193 5295537 complement(5053607..5055049) 1 NC_009617.1 hypothetical protein 5055049 5295537 Cbei_4382 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311447.1 5053607 R 290402 CDS YP_001311448.1 150019194 5295538 complement(5056704..5057414) 1 NC_009617.1 PFAM: beta-lactamase domain protein; KEGG: cac:CAC0364 metal-dependent hydrolase of the metallobeta-lactamase superfamily; beta-lactamase domain-containing protein 5057414 5295538 Cbei_4383 Clostridium beijerinckii NCIMB 8052 beta-lactamase domain-containing protein YP_001311448.1 5056704 R 290402 CDS YP_001311449.1 150019195 5295539 complement(5057486..5057929) 1 NC_009617.1 hypothetical protein 5057929 5295539 Cbei_4384 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311449.1 5057486 R 290402 CDS YP_001311450.1 150019196 5295540 complement(5057941..5059287) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_0126 pneumococcal surface protein A; cell wall binding repeat-containing protein 5059287 5295540 Cbei_4385 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311450.1 5057941 R 290402 CDS YP_001311451.1 150019197 5295541 complement(5059344..5059619) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; cell wall binding repeat-containing protein 5059619 5295541 Cbei_4386 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311451.1 5059344 R 290402 CDS YP_001311452.1 150019198 5295542 complement(5059636..5061069) 1 NC_009617.1 hypothetical protein 5061069 5295542 Cbei_4387 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311452.1 5059636 R 290402 CDS YP_001311453.1 150019199 5295543 complement(5061318..5061965) 1 NC_009617.1 hypothetical protein 5061965 5295543 Cbei_4388 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311453.1 5061318 R 290402 CDS YP_001311454.1 150019200 5295544 complement(5062101..5063897) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_1965 choline binding protein PcpA; cell wall binding repeat-containing protein 5063897 5295544 Cbei_4389 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311454.1 5062101 R 290402 CDS YP_001311455.1 150019201 5295545 complement(5063887..5065392) 1 NC_009617.1 hypothetical protein 5065392 5295545 Cbei_4390 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311455.1 5063887 R 290402 CDS YP_001311456.1 150019202 5295546 complement(5065435..5065794) 1 NC_009617.1 hypothetical protein 5065794 5295546 Cbei_4391 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311456.1 5065435 R 290402 CDS YP_001311457.1 150019203 5295547 complement(5065824..5066351) 1 NC_009617.1 hypothetical protein 5066351 5295547 Cbei_4392 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311457.1 5065824 R 290402 CDS YP_001311458.1 150019204 5295548 complement(5066379..5066978) 1 NC_009617.1 hypothetical protein 5066978 5295548 Cbei_4393 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311458.1 5066379 R 290402 CDS YP_001311459.1 150019205 5295549 complement(5067004..5068428) 1 NC_009617.1 KEGG: bfr:BF1944 hypothetical protein; hypothetical protein 5068428 5295549 Cbei_4394 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311459.1 5067004 R 290402 CDS YP_001311460.1 150019206 5295550 complement(5068418..5069029) 1 NC_009617.1 hypothetical protein 5069029 5295550 Cbei_4395 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311460.1 5068418 R 290402 CDS YP_001311461.1 150019207 5295551 complement(5069121..5069900) 1 NC_009617.1 hypothetical protein 5069900 5295551 Cbei_4396 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311461.1 5069121 R 290402 CDS YP_001311462.1 150019208 5295552 complement(5070578..5073208) 1 NC_009617.1 molecular chaperone-like protein 5073208 5295552 Cbei_4397 Clostridium beijerinckii NCIMB 8052 molecular chaperone-like protein YP_001311462.1 5070578 R 290402 CDS YP_001311463.1 150019209 5295553 complement(5073282..5073980) 1 NC_009617.1 hypothetical protein 5073980 5295553 Cbei_4398 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311463.1 5073282 R 290402 CDS YP_001311464.1 150019210 5295554 complement(5073977..5075257) 1 NC_009617.1 hypothetical protein 5075257 5295554 Cbei_4399 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311464.1 5073977 R 290402 CDS YP_001311465.1 150019211 5295555 complement(5075330..5077168) 1 NC_009617.1 KEGG: pfa:PF11_0486 MAEBL; Serine/threonine protein phosphatase-like protein 5077168 5295555 Cbei_4400 Clostridium beijerinckii NCIMB 8052 Serine/threonine protein phosphatase-like protein YP_001311465.1 5075330 R 290402 CDS YP_001311466.1 150019212 5295556 complement(5077231..5078079) 1 NC_009617.1 SMART: protein phosphatase 2C domain protein; KEGG: lmo:lmo1821 similar to phosphoprotein phosphatase; protein phosphatase 2C domain-containing protein 5078079 5295556 Cbei_4401 Clostridium beijerinckii NCIMB 8052 protein phosphatase 2C domain-containing protein YP_001311466.1 5077231 R 290402 CDS YP_001311467.1 150019213 5295557 complement(5078091..5078591) 1 NC_009617.1 KEGG: sil:SPO1063 hypothetical protein; FHA domain-containing protein 5078591 5295557 Cbei_4402 Clostridium beijerinckii NCIMB 8052 FHA domain-containing protein YP_001311467.1 5078091 R 290402 CDS YP_001311468.1 150019214 5295558 complement(5078674..5079243) 1 NC_009617.1 hypothetical protein 5079243 5295558 Cbei_4403 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311468.1 5078674 R 290402 CDS YP_001311469.1 150019215 5295559 complement(5079404..5079841) 1 NC_009617.1 PFAM: heat shock protein DnaJ domain protein; KEGG: sth:STH505 heat shock protein, DnaJ; heat shock protein DnaJ domain-containing protein 5079841 5295559 Cbei_4404 Clostridium beijerinckii NCIMB 8052 heat shock protein DnaJ domain-containing protein YP_001311469.1 5079404 R 290402 CDS YP_001311470.1 150019216 5295560 complement(5079946..5080371) 1 NC_009617.1 hypothetical protein 5080371 5295560 Cbei_4405 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311470.1 5079946 R 290402 CDS YP_001311471.1 150019217 5295561 complement(5080399..5080824) 1 NC_009617.1 hypothetical protein 5080824 5295561 Cbei_4406 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311471.1 5080399 R 290402 CDS YP_001311472.1 150019218 5295562 complement(5080882..5083059) 1 NC_009617.1 hypothetical protein 5083059 5295562 Cbei_4407 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311472.1 5080882 R 290402 CDS YP_001311473.1 150019219 5295563 complement(5083442..5084581) 1 NC_009617.1 TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: dsy:DSY3820 hypothetical protein; carboxynorspermidine decarboxylase 5084581 5295563 Cbei_4408 Clostridium beijerinckii NCIMB 8052 carboxynorspermidine decarboxylase YP_001311473.1 5083442 R 290402 CDS YP_001311474.1 150019220 5295564 complement(5084991..5086193) 1 NC_009617.1 PFAM: Saccharopine dehydrogenase; KEGG: bha:BH3957 hypothetical protein; saccharopine dehydrogenase 5086193 5295564 Cbei_4409 Clostridium beijerinckii NCIMB 8052 saccharopine dehydrogenase YP_001311474.1 5084991 R 290402 CDS YP_001311475.1 150019221 5295565 complement(5086337..5087191) 1 NC_009617.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 5087191 5295565 Cbei_4410 Clostridium beijerinckii NCIMB 8052 spermidine synthase YP_001311475.1 5086337 R 290402 CDS YP_001311476.1 150019222 5295566 complement(5087192..5088649) 1 NC_009617.1 PFAM: aminotransferase, class V; Orn/Lys/Arg decarboxylase, major region; aromatic amino acid beta-eliminating lyase/threonine aldolase; Orn/Lys/Arg decarboxylase domain protein; KEGG: dsy:DSY0236 hypothetical protein; Orn/Lys/Arg decarboxylase 5088649 5295566 Cbei_4411 Clostridium beijerinckii NCIMB 8052 Orn/Lys/Arg decarboxylase YP_001311476.1 5087192 R 290402 CDS YP_001311477.1 150019223 5295567 complement(5088668..5089483) 1 NC_009617.1 S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine; S-adenosylmethionine decarboxylase 5089483 5295567 Cbei_4412 Clostridium beijerinckii NCIMB 8052 S-adenosylmethionine decarboxylase YP_001311477.1 5088668 R 290402 CDS YP_001311478.1 150019224 5295568 complement(5089770..5090462) 1 NC_009617.1 KEGG: mba:Mbar_A0067 hypothetical protein; hypothetical protein 5090462 5295568 Cbei_4413 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311478.1 5089770 R 290402 CDS YP_001311479.1 150019225 5295569 complement(5090686..5091003) 1 NC_009617.1 KEGG: cpf:CPF_1367 hypothetical protein; hypothetical protein 5091003 5295569 Cbei_4414 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311479.1 5090686 R 290402 CDS YP_001311480.1 150019226 5295570 complement(5091231..5091833) 1 NC_009617.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cac:CAC3581 HAD superfamily hydrolase; HAD family hydrolase 5091833 5295570 Cbei_4415 Clostridium beijerinckii NCIMB 8052 HAD family hydrolase YP_001311480.1 5091231 R 290402 CDS YP_001311481.1 150019227 5295571 complement(5092149..5092712) 1 NC_009617.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: chy:CHY_1871 HDIG domain protein; metal dependent phosphohydrolase 5092712 5295571 Cbei_4416 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001311481.1 5092149 R 290402 CDS YP_001311482.1 150019228 5295572 complement(5092960..5093787) 1 NC_009617.1 hypothetical protein 5093787 5295572 Cbei_4417 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311482.1 5092960 R 290402 CDS YP_001311483.1 150019229 5295573 5094158..5094610 1 NC_009617.1 KEGG: ddi:DDB_0232331 RNA-binding region-containing protein (RNP-1); RNA-binding region-containing protein (RNP-1) 5094610 5295573 Cbei_4418 Clostridium beijerinckii NCIMB 8052 RNA-binding region-containing protein (RNP-1) YP_001311483.1 5094158 D 290402 CDS YP_001311484.1 150019230 5295574 5094908..5096077 1 NC_009617.1 catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase 5096077 5295574 Cbei_4419 Clostridium beijerinckii NCIMB 8052 galactokinase YP_001311484.1 5094908 D 290402 CDS YP_001311485.1 150019231 5295575 5096185..5097177 1 NC_009617.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: cac:CAC2960 UDP-galactose 4-epimerase; UDP-glucose 4-epimerase 5097177 5295575 Cbei_4420 Clostridium beijerinckii NCIMB 8052 UDP-glucose 4-epimerase YP_001311485.1 5096185 D 290402 CDS YP_001311486.1 150019232 5295576 5097361..5098860 1 NC_009617.1 catalyzes the formation of alpha-D-glucose 1-phosphate and UDP-galactose from UDP-glucose and alpha-D-galactose 1-phosphate in galactose metabolism; galactose-1-phosphate uridylyltransferase 5098860 5295576 Cbei_4421 Clostridium beijerinckii NCIMB 8052 galactose-1-phosphate uridylyltransferase YP_001311486.1 5097361 D 290402 CDS YP_001311487.1 150019233 5295577 5098873..5099886 1 NC_009617.1 PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: cac:CAC2962 transcriptional regulators of the LacI family; alanine racemase 5099886 5295577 Cbei_4422 Clostridium beijerinckii NCIMB 8052 alanine racemase YP_001311487.1 5098873 D 290402 CDS YP_001311488.1 150019234 5295578 5100402..5101826 1 NC_009617.1 PFAM: Radical SAM domain protein; KEGG: cth:Cthe_0407 radical SAM; radical SAM domain-containing protein 5101826 5295578 Cbei_4423 Clostridium beijerinckii NCIMB 8052 radical SAM domain-containing protein YP_001311488.1 5100402 D 290402 CDS YP_001311489.1 150019235 5295579 5101829..5102575 1 NC_009617.1 KEGG: cth:Cthe_0406 hypothetical protein; hypothetical protein 5102575 5295579 Cbei_4424 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311489.1 5101829 D 290402 CDS YP_001311490.1 150019236 5295580 complement(5103256..5103828) 1 NC_009617.1 PFAM: carbonic anhydrase; KEGG: cpf:CPF_0414 carbonic anhydrase; carbonic anhydrase 5103828 5295580 Cbei_4425 Clostridium beijerinckii NCIMB 8052 carbonic anhydrase YP_001311490.1 5103256 R 290402 CDS YP_001311491.1 150019237 5295581 complement(5103937..5104980) 1 NC_009617.1 KEGG: ctc:CTC00860 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein 5104980 5295581 Cbei_4426 Clostridium beijerinckii NCIMB 8052 D-galactose-binding periplasmic protein YP_001311491.1 5103937 R 290402 CDS YP_001311492.1 150019238 5295582 complement(5105037..5106098) 1 NC_009617.1 KEGG: cpe:CPE1341 probable galactoside ABC transporter; galactoside ABC transporter 5106098 5295582 Cbei_4427 Clostridium beijerinckii NCIMB 8052 galactoside ABC transporter YP_001311492.1 5105037 R 290402 CDS YP_001311493.1 150019239 5295583 complement(5106473..5107558) 1 NC_009617.1 KEGG: ctc:CTC00860 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein 5107558 5295583 Cbei_4428 Clostridium beijerinckii NCIMB 8052 D-galactose-binding periplasmic protein YP_001311493.1 5106473 R 290402 CDS YP_001311494.1 150019240 5295584 complement(5107609..5108589) 1 NC_009617.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ret:RHE_CH00492 probable sugar ABC transporter substrate-binding protein; periplasmic binding protein/LacI transcriptional regulator 5108589 5295584 Cbei_4429 Clostridium beijerinckii NCIMB 8052 periplasmic binding protein/LacI transcriptional regulator YP_001311494.1 5107609 R 290402 CDS YP_001311495.1 150019241 5295585 complement(5108589..5110397) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; Cache domain protein; histidine kinase internal region; KEGG: bha:BH3447 two-component sensor histidine kinase; multi-sensor signal transduction histidine kinase 5110397 5295585 Cbei_4430 Clostridium beijerinckii NCIMB 8052 multi-sensor signal transduction histidine kinase YP_001311495.1 5108589 R 290402 CDS YP_001311496.1 150019242 5295586 complement(5110409..5112025) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: tte:TTE2343 AraC-type DNA-binding domain-containing proteins; response regulator receiver protein 5112025 5295586 Cbei_4431 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001311496.1 5110409 R 290402 CDS YP_001311497.1 150019243 5295587 complement(5112362..5113384) 1 NC_009617.1 PFAM: inner-membrane translocator; KEGG: cpf:CPF_1550 galactoside ABC transporter permease; monosaccharide-transporting ATPase 5113384 5295587 Cbei_4432 Clostridium beijerinckii NCIMB 8052 monosaccharide-transporting ATPase YP_001311497.1 5112362 R 290402 CDS YP_001311498.1 150019244 5295588 complement(5113794..5115293) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ctc:CTC00861 galactoside transport ATP-binding protein mglA; ABC transporter 5115293 5295588 Cbei_4433 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001311498.1 5113794 R 290402 CDS YP_001311499.1 150019245 5295589 complement(5115382..5116452) 1 NC_009617.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ctc:CTC00860 D-galactose-binding periplasmic protein precursor; periplasmic binding protein/LacI transcriptional regulator 5116452 5295589 Cbei_4434 Clostridium beijerinckii NCIMB 8052 periplasmic binding protein/LacI transcriptional regulator YP_001311499.1 5115382 R 290402 CDS YP_001311500.1 150019246 5295590 complement(5116867..5118573) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC1387 membrane associated chemotaxis sensory transducer protein (MSP domain and HamP domain); methyl-accepting chemotaxis sensory transducer 5118573 5295590 Cbei_4435 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001311500.1 5116867 R 290402 CDS YP_001311501.1 150019247 5295591 complement(5118602..5120032) 1 NC_009617.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: tcx:Tcr_1297 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); diguanylate cyclase/phosphodiesterase 5120032 5295591 Cbei_4436 Clostridium beijerinckii NCIMB 8052 diguanylate cyclase/phosphodiesterase YP_001311501.1 5118602 R 290402 CDS YP_001311502.1 150019248 5295592 5120423..5121022 1 NC_009617.1 PFAM: phage integrase family protein; KEGG: lbl:LBL_1710 site-specific recombinase XerD; phage integrase family protein 5121022 5295592 Cbei_4437 Clostridium beijerinckii NCIMB 8052 phage integrase family protein YP_001311502.1 5120423 D 290402 CDS YP_001311503.1 150019249 5295593 complement(5121106..5122854) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC1387 membrane associated chemotaxis sensory transducer protein (MSP domain and HamP domain); methyl-accepting chemotaxis sensory transducer 5122854 5295593 Cbei_4438 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001311503.1 5121106 R 290402 CDS YP_001311504.1 150019250 5295594 complement(5123093..5124511) 1 NC_009617.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and IscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; in Thermotoga this enzyme has an extra C-terminal domain; thiamine biosynthesis protein ThiH 5124511 thiH 5295594 thiH Clostridium beijerinckii NCIMB 8052 thiamine biosynthesis protein ThiH YP_001311504.1 5123093 R 290402 CDS YP_001311505.1 150019251 5295595 complement(5124647..5124898) 1 NC_009617.1 KEGG: cac:CAC0487 uncharacterized protein, ortholog of Thermotoga maritima (4981823); hypothetical protein 5124898 5295595 Cbei_4440 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311505.1 5124647 R 290402 CDS YP_001311506.1 150019252 5295596 complement(5125250..5127346) 1 NC_009617.1 PFAM: glycoside hydrolase, clan GH-D; KEGG: aor:AO090011000063 predicted protein Pfam: Melibiase; glycoside hydrolase 5127346 5295596 Cbei_4441 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001311506.1 5125250 R 290402 CDS YP_001311507.1 150019253 5295597 complement(5127556..5129769) 1 NC_009617.1 PFAM: glycoside hydrolase, clan GH-D; KEGG: cpe:CPE0374 alpha-galactosidase; glycoside hydrolase 5129769 5295597 Cbei_4442 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001311507.1 5127556 R 290402 CDS YP_001311508.1 150019254 5295598 complement(5129828..5130658) 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpe:CPE0373 probable suger ABC transporter; binding-protein-dependent transport system inner membrane protein 5130658 5295598 Cbei_4443 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001311508.1 5129828 R 290402 CDS YP_001311509.1 150019255 5295599 complement(5130675..5131613) 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpe:CPE0372 probable ABC transporter; binding-protein-dependent transport system inner membrane protein 5131613 5295599 Cbei_4444 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001311509.1 5130675 R 290402 CDS YP_001311510.1 150019256 5295600 complement(5131669..5132961) 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 1; KEGG: cpe:CPE0371 conserved hypothetical protein; extracellular solute-binding protein 5132961 5295600 Cbei_4445 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001311510.1 5131669 R 290402 CDS YP_001311511.1 150019257 5295601 5133411..5134271 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: cpe:CPE0370 probable transcriptional regulator; AraC family transcriptional regulator 5134271 5295601 Cbei_4446 Clostridium beijerinckii NCIMB 8052 AraC family transcriptional regulator YP_001311511.1 5133411 D 290402 CDS YP_001311512.1 150019258 5295602 complement(5134475..5135308) 1 NC_009617.1 PFAM: DegV family protein; KEGG: cno:NT01CX_0895 DegV family protein; DegV family protein 5135308 5295602 Cbei_4447 Clostridium beijerinckii NCIMB 8052 DegV family protein YP_001311512.1 5134475 R 290402 CDS YP_001311513.1 150019259 5295603 complement(5135793..5136989) 1 NC_009617.1 PFAM: inner-membrane translocator; KEGG: gka:GK1908 L-arabinose ABC transporter (permease); monosaccharide-transporting ATPase 5136989 5295603 Cbei_4448 Clostridium beijerinckii NCIMB 8052 monosaccharide-transporting ATPase YP_001311513.1 5135793 R 290402 CDS YP_001311514.1 150019260 5295604 complement(5137002..5138537) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK1909 ABC transporter (ATP-binding protein); ABC transporter 5138537 5295604 Cbei_4449 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001311514.1 5137002 R 290402 CDS YP_001311515.1 150019261 5295605 complement(5138608..5139747) 1 NC_009617.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: gka:GK1910 ABC transporter (substrate-binding protein); monosaccharide-transporting ATPase 5139747 5295605 Cbei_4450 Clostridium beijerinckii NCIMB 8052 monosaccharide-transporting ATPase YP_001311515.1 5138608 R 290402 CDS YP_001311516.1 150019262 5295606 complement(5139955..5140227) 1 NC_009617.1 hypothetical protein 5140227 5295606 Cbei_4451 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311516.1 5139955 R 290402 CDS YP_001311517.1 150019263 5295607 complement(5140888..5142495) 1 NC_009617.1 PFAM: carbohydrate kinase, FGGY; KEGG: bth:BT_0350 xylulose kinase (xylulokinase); carbohydrate kinase FGGY 5142495 5295607 Cbei_4452 Clostridium beijerinckii NCIMB 8052 carbohydrate kinase FGGY YP_001311517.1 5140888 R 290402 CDS YP_001311518.1 150019264 5295608 complement(5143103..5145094) 1 NC_009617.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; KEGG: cac:CAC1348 transketolase, TKT; transketolase 5145094 5295608 Cbei_4453 Clostridium beijerinckii NCIMB 8052 transketolase YP_001311518.1 5143103 R 290402 CDS YP_001311519.1 150019265 5295609 complement(5145749..5146396) 1 NC_009617.1 TIGRFAM: transaldolase; PFAM: Transaldolase; KEGG: lwe:lwe2691 transaldolase; transaldolase 5146396 5295609 Cbei_4454 Clostridium beijerinckii NCIMB 8052 transaldolase YP_001311519.1 5145749 R 290402 CDS YP_001311520.1 150019266 5295610 complement(5146635..5147321) 1 NC_009617.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 5147321 sgaE 5295610 sgaE Clostridium beijerinckii NCIMB 8052 L-ribulose-5-phosphate 4-epimerase YP_001311520.1 5146635 R 290402 CDS YP_001311521.1 150019267 5295611 complement(5147457..5148530) 1 NC_009617.1 PFAM: GntR family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: bld:BLi03256 transcriptional regulator, fragment 2; RBL05774; GntR family transcriptional regulator 5148530 5295611 Cbei_4456 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001311521.1 5147457 R 290402 CDS YP_001311522.1 150019268 5295612 5149093..5150562 1 NC_009617.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase 5150562 5295612 Cbei_4457 Clostridium beijerinckii NCIMB 8052 L-arabinose isomerase YP_001311522.1 5149093 D 290402 CDS YP_001311523.1 150019269 5295613 complement(5150759..5152528) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; Cache domain protein; histidine kinase internal region; KEGG: bha:BH3447 two-component sensor histidine kinase; histidine kinase internal region 5152528 5295613 Cbei_4458 Clostridium beijerinckii NCIMB 8052 histidine kinase internal region YP_001311523.1 5150759 R 290402 CDS YP_001311524.1 150019270 5295614 complement(5152795..5153802) 1 NC_009617.1 PFAM: inner-membrane translocator; KEGG: aav:Aave_2249 inner-membrane translocator; monosaccharide-transporting ATPase 5153802 5295614 Cbei_4459 Clostridium beijerinckii NCIMB 8052 monosaccharide-transporting ATPase YP_001311524.1 5152795 R 290402 CDS YP_001311525.1 150019271 5295615 complement(5153799..5154839) 1 NC_009617.1 PFAM: inner-membrane translocator; KEGG: aav:Aave_2250 inner-membrane translocator; monosaccharide-transporting ATPase 5154839 5295615 Cbei_4460 Clostridium beijerinckii NCIMB 8052 monosaccharide-transporting ATPase YP_001311525.1 5153799 R 290402 CDS YP_001311526.1 150019272 5295616 complement(5154841..5156358) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: sde:Sde_0767 sugar uptake ABC transporter ATP-binding protein; ABC transporter 5156358 5295616 Cbei_4461 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001311526.1 5154841 R 290402 CDS YP_001311527.1 150019273 5295617 complement(5156462..5157469) 1 NC_009617.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: aav:Aave_2255 periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator 5157469 5295617 Cbei_4462 Clostridium beijerinckii NCIMB 8052 periplasmic binding protein/LacI transcriptional regulator YP_001311527.1 5156462 R 290402 CDS YP_001311528.1 150019274 5295618 complement(5157593..5158540) 1 NC_009617.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: gfo:orf7 sugar-binding sensor histidine kinase/response regulator hybrid; periplasmic binding protein/LacI transcriptional regulator 5158540 5295618 Cbei_4463 Clostridium beijerinckii NCIMB 8052 periplasmic binding protein/LacI transcriptional regulator YP_001311528.1 5157593 R 290402 CDS YP_001311529.1 150019275 5295619 complement(5158542..5159744) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: gka:GK1911 two-component response regulator; response regulator receiver protein 5159744 5295619 Cbei_4464 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001311529.1 5158542 R 290402 CDS YP_001311530.1 150019276 5295620 5160082..5161137 1 NC_009617.1 PFAM: Aldose 1-epimerase; KEGG: sus:Acid_1458 aldose 1-epimerase; aldose 1-epimerase 5161137 5295620 Cbei_4465 Clostridium beijerinckii NCIMB 8052 aldose 1-epimerase YP_001311530.1 5160082 D 290402 CDS YP_001311531.1 150019277 5295621 5162416..5164119 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cth:Cthe_0298 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5164119 5295621 Cbei_4466 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001311531.1 5162416 D 290402 CDS YP_001311532.1 150019278 5295622 complement(5164286..5165152) 1 NC_009617.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: efa:EF0947 hydrolase, haloacid dehalogenase-like family; cof family hydrolase 5165152 5295622 Cbei_4467 Clostridium beijerinckii NCIMB 8052 cof family hydrolase YP_001311532.1 5164286 R 290402 CDS YP_001311533.1 150019279 5295623 complement(5165618..5166325) 1 NC_009617.1 PFAM: GntR family transcriptional regulator; UbiC transcription regulator-associated domain protein; KEGG: lga:LGAS_0188 transcriptional regulator; GntR family transcriptional regulator 5166325 5295623 Cbei_4468 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001311533.1 5165618 R 290402 CDS YP_001311534.1 150019280 5295624 complement(5166932..5167876) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; SCP-like extracellular; KEGG: cpe:CPE0570 hypothetical protein; SCP-like extracellular protein 5167876 5295624 Cbei_4469 Clostridium beijerinckii NCIMB 8052 SCP-like extracellular protein YP_001311534.1 5166932 R 290402 CDS YP_001311535.1 150019281 5295625 5168314..5169006 1 NC_009617.1 PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cno:NT01CX_1661 predicted metal-dependent phosphoesterase (PHP family); phosphotransferase domain-containing protein 5169006 5295625 Cbei_4470 Clostridium beijerinckii NCIMB 8052 phosphotransferase domain-containing protein YP_001311535.1 5168314 D 290402 CDS YP_001311536.1 150019282 5295626 complement(5169100..5169357) 1 NC_009617.1 hypothetical protein 5169357 5295626 Cbei_4471 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311536.1 5169100 R 290402 CDS YP_001311537.1 150019283 5295627 complement(5169516..5170109) 1 NC_009617.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: dsy:DSY0302 hypothetical protein; metal dependent phosphohydrolase 5170109 5295627 Cbei_4472 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001311537.1 5169516 R 290402 CDS YP_001311538.1 150019284 5295628 complement(5170244..5170858) 1 NC_009617.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: dsy:DSY0302 hypothetical protein; metal dependent phosphohydrolase 5170858 5295628 Cbei_4473 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001311538.1 5170244 R 290402 CDS YP_001311539.1 150019285 5295629 complement(5171153..5173903) 1 NC_009617.1 TIGRFAM: ATPase P; calcium-translocating P-type ATPase, PMCA-type; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: cno:NT01CX_0593 calcium-translocating P-type ATPase, PMCA-type; calcium-translocating P-type ATPase 5173903 5295629 Cbei_4474 Clostridium beijerinckii NCIMB 8052 calcium-translocating P-type ATPase YP_001311539.1 5171153 R 290402 CDS YP_001311540.1 150019286 5295630 complement(5174083..5175864) 1 NC_009617.1 TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cpf:CPF_1542 ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase RecQ 5175864 5295630 Cbei_4475 Clostridium beijerinckii NCIMB 8052 ATP-dependent DNA helicase RecQ YP_001311540.1 5174083 R 290402 CDS YP_001311541.1 150019287 5295631 complement(5176188..5177216) 1 NC_009617.1 PFAM: helix-turn-helix, Fis-type; sugar diacid recognition domain protein; KEGG: cac:CAC2833 uncharacterized conserved protein, YaeG family; transcriptional regulator CdaR 5177216 5295631 Cbei_4476 Clostridium beijerinckii NCIMB 8052 transcriptional regulator CdaR YP_001311541.1 5176188 R 290402 CDS YP_001311542.1 150019288 5295632 complement(5177351..5177878) 1 NC_009617.1 KEGG: ppd:Ppro_3678 transposase and inactivated derivatives; transposase and inactivated derivatives 5177878 5295632 Cbei_4477 Clostridium beijerinckii NCIMB 8052 transposase and inactivated derivatives YP_001311542.1 5177351 R 290402 CDS YP_001311543.1 150019289 5295633 complement(5177886..5178428) 1 NC_009617.1 KEGG: gka:GK0167 transposase of IS653-like element; hypothetical protein 5178428 5295633 Cbei_4478 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311543.1 5177886 R 290402 CDS YP_001311544.1 150019290 5295634 complement(5178800..5179942) 1 NC_009617.1 PFAM: glycerate kinase; KEGG: cac:CAC2834 glycerate kinase; glycerate kinase 5179942 5295634 Cbei_4479 Clostridium beijerinckii NCIMB 8052 glycerate kinase YP_001311544.1 5178800 R 290402 CDS YP_001311545.1 150019291 5295635 complement(5180012..5181298) 1 NC_009617.1 PFAM: Gluconate transporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: cac:CAC2835 gluconate permease, GntP; gluconate transporter 5181298 5295635 Cbei_4480 Clostridium beijerinckii NCIMB 8052 gluconate transporter YP_001311545.1 5180012 R 290402 CDS YP_001311546.1 150019292 5295636 complement(5181755..5184289) 1 NC_009617.1 PFAM: beta-lactamase domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rubredoxin-type Fe(Cys)4 protein; flavodoxin/nitric oxide synthase; KEGG: cpe:CPE1014 probable flavoprotein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 5184289 5295636 Cbei_4481 Clostridium beijerinckii NCIMB 8052 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001311546.1 5181755 R 290402 CDS YP_001311547.1 150019293 5295637 complement(5184402..5185655) 1 NC_009617.1 PFAM: UV-endonuclease UvdE; KEGG: cno:NT01CX_0232 UV DNA damage endonuclease (UV-endonuclease) UvdE; UV damage endonuclease 5185655 uvsE 5295637 uvsE Clostridium beijerinckii NCIMB 8052 UV damage endonuclease YP_001311547.1 5184402 R 290402 CDS YP_001311548.1 150019294 5295638 complement(5185954..5187177) 1 NC_009617.1 PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: cpf:CPF_1269 rubredoxin/flavodoxin/oxidoreductase; beta-lactamase domain-containing protein 5187177 5295638 Cbei_4483 Clostridium beijerinckii NCIMB 8052 beta-lactamase domain-containing protein YP_001311548.1 5185954 R 290402 CDS YP_001311549.1 150019295 5295639 complement(5187410..5189116) 1 NC_009617.1 KEGG: cno:NT01CX_0224 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 5189116 5295639 Cbei_4484 Clostridium beijerinckii NCIMB 8052 multi-sensor signal transduction histidine kinase YP_001311549.1 5187410 R 290402 CDS YP_001311550.1 150019296 5295640 complement(5189190..5191139) 1 NC_009617.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; SMART: PAS domain containing protein; KEGG: ana:alr4716 two-component sensor histidine kinase; multi-sensor signal transduction histidine kinase 5191139 5295640 Cbei_4485 Clostridium beijerinckii NCIMB 8052 multi-sensor signal transduction histidine kinase YP_001311550.1 5189190 R 290402 CDS YP_001311551.1 150019297 5295641 complement(5191150..5192427) 1 NC_009617.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rfr:Rfer_0125 periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator 5192427 5295641 Cbei_4486 Clostridium beijerinckii NCIMB 8052 periplasmic binding protein/LacI transcriptional regulator YP_001311551.1 5191150 R 290402 CDS YP_001311552.1 150019298 5295642 complement(5192682..5193311) 1 NC_009617.1 TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; KEGG: ctc:CTC01751 thiamin-phosphate pyrophosphorylase; thiamine-phosphate pyrophosphorylase 5193311 5295642 Cbei_4487 Clostridium beijerinckii NCIMB 8052 thiamine-phosphate pyrophosphorylase YP_001311552.1 5192682 R 290402 CDS YP_001311553.1 150019299 5295643 complement(5193404..5194234) 1 NC_009617.1 catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase 5194234 5295643 Cbei_4488 Clostridium beijerinckii NCIMB 8052 hydroxyethylthiazole kinase YP_001311553.1 5193404 R 290402 CDS YP_001311554.1 150019300 5295644 complement(5194441..5195751) 1 NC_009617.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 5195751 5295644 Cbei_4489 Clostridium beijerinckii NCIMB 8052 thiamine biosynthesis protein ThiC YP_001311554.1 5194441 R 290402 CDS YP_001311555.1 150019301 5295645 complement(5195822..5196628) 1 NC_009617.1 TIGRFAM: phosphomethylpyrimidine kinase; PFAM: protein of unknown function UPF0031; Phosphomethylpyrimidine kinase type-1; KEGG: cpe:CPE1338 phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase 5196628 5295645 Cbei_4490 Clostridium beijerinckii NCIMB 8052 phosphomethylpyrimidine kinase YP_001311555.1 5195822 R 290402 CDS YP_001311556.1 150019302 5295646 complement(5196659..5197198) 1 NC_009617.1 TIGRFAM: thiW protein; KEGG: ctc:CTC01754 hypothetical protein; thiW protein 5197198 5295646 Cbei_4491 Clostridium beijerinckii NCIMB 8052 thiW protein YP_001311556.1 5196659 R 290402 CDS YP_001311557.1 150019303 5295647 complement(5197564..5198808) 1 NC_009617.1 PFAM: FMN-binding domain protein; KEGG: cac:CAC2762 polyferredoxin; FMN-binding domain-containing protein 5198808 5295647 Cbei_4492 Clostridium beijerinckii NCIMB 8052 FMN-binding domain-containing protein YP_001311557.1 5197564 R 290402 CDS YP_001311558.1 150019304 5295648 complement(5199237..5199359) 1 NC_009617.1 hypothetical protein 5199359 5295648 Cbei_4493 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311558.1 5199237 R 290402 CDS YP_001311559.1 150019305 5295649 complement(5199572..5200240) 1 NC_009617.1 PFAM: ApbE family lipoprotein; KEGG: ctc:CTC01027 thiamine biosynthesis lipoprotein apbE precursor; ApbE family lipoprotein 5200240 5295649 Cbei_4494 Clostridium beijerinckii NCIMB 8052 ApbE family lipoprotein YP_001311559.1 5199572 R 290402 CDS YP_001311560.1 150019306 5295650 complement(5200525..5202081) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cac:CAC2760 membrane-associated sensory histidine kinase with HAMP domain; integral membrane sensor signal transduction histidine kinase 5202081 5295650 Cbei_4495 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001311560.1 5200525 R 290402 CDS YP_001311561.1 150019307 5295651 complement(5202078..5202767) 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cac:CAC2759 response regulator (CheY receiver domain and HTH-type DNA-binding domain); two component transcriptional regulator 5202767 5295651 Cbei_4496 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001311561.1 5202078 R 290402 CDS YP_001311562.1 150019308 5295652 5203187..5203471 1 NC_009617.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: mba:Mbar_A1381 hypothetical protein; antibiotic biosynthesis monooxygenase 5203471 5295652 Cbei_4497 Clostridium beijerinckii NCIMB 8052 antibiotic biosynthesis monooxygenase YP_001311562.1 5203187 D 290402 CDS YP_001311563.1 150019309 5295653 complement(5203926..5204804) 1 NC_009617.1 TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit; PFAM: serine dehydratase alpha chain; KEGG: cpr:CPR_2643 L-serine dehydratase, iron-sulfur-dependent, alpha subunit; L-serine dehydratase, iron-sulfur-dependent subunit alpha 5204804 5295653 Cbei_4498 Clostridium beijerinckii NCIMB 8052 L-serine dehydratase, iron-sulfur-dependent subunit alpha YP_001311563.1 5203926 R 290402 CDS YP_001311564.1 150019310 5295654 complement(5204806..5205486) 1 NC_009617.1 TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; PFAM: amino acid-binding ACT domain protein; serine dehydratase beta chain; KEGG: cpr:CPR_2642 L-serine dehydratase, iron-sulfur-dependent, beta subunit; L-serine dehydratase, iron-sulfur-dependent subunit beta 5205486 5295654 Cbei_4499 Clostridium beijerinckii NCIMB 8052 L-serine dehydratase, iron-sulfur-dependent subunit beta YP_001311564.1 5204806 R 290402 CDS YP_001311565.1 150019311 5295655 complement(5205760..5206497) 1 NC_009617.1 PFAM: esterase; KEGG: cac:CAC1962 predicted esterase of alpha/beta hydrolase superfamily, YbbA B.subtilis ortholog; esterase 5206497 5295655 Cbei_4500 Clostridium beijerinckii NCIMB 8052 esterase YP_001311565.1 5205760 R 290402 CDS YP_001311566.1 150019312 5295656 complement(5206504..5207307) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: bcz:BCZK2976 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 5207307 5295656 Cbei_4501 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001311566.1 5206504 R 290402 CDS YP_001311567.1 150019313 5295657 5207491..5208585 1 NC_009617.1 PFAM: transport system permease; KEGG: ctc:CTC00961 iron(III) dicitrate transport system permease fecD; transport system permease 5208585 5295657 Cbei_4502 Clostridium beijerinckii NCIMB 8052 transport system permease YP_001311567.1 5207491 D 290402 CDS YP_001311568.1 150019314 5295658 5208595..5209386 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_1424 iron(III) ABC transporter ATP-binding protein; ABC transporter 5209386 5295658 Cbei_4503 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001311568.1 5208595 D 290402 CDS YP_001311569.1 150019315 5295659 5209446..5210486 1 NC_009617.1 PFAM: periplasmic binding protein; KEGG: ssa:SSA_1581 metal-binding ABC transporter (probably hemin); periplasmic binding protein 5210486 5295659 Cbei_4504 Clostridium beijerinckii NCIMB 8052 periplasmic binding protein YP_001311569.1 5209446 D 290402 CDS YP_001311570.1 150019316 5295660 5210606..5212279 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: cpe:CPE0570 hypothetical protein; cell wall binding repeat-containing protein 5212279 5295660 Cbei_4505 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311570.1 5210606 D 290402 CDS YP_001311571.1 150019317 5295661 complement(5212615..5212968) 1 NC_009617.1 PFAM: protein of unknown function DUF1667; KEGG: cac:CAC1324 uncharacterized predected metal-binding protein; hypothetical protein 5212968 5295661 Cbei_4506 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311571.1 5212615 R 290402 CDS YP_001311572.1 150019318 5295662 complement(5212970..5214223) 1 NC_009617.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cac:CAC1323 NAD(FAD)-dependent dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 5214223 5295662 Cbei_4507 Clostridium beijerinckii NCIMB 8052 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001311572.1 5212970 R 290402 CDS YP_001311573.1 150019319 5295663 complement(5214241..5215668) 1 NC_009617.1 PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: cac:CAC1322 glycerol-3-phosphate dehydrogenase, GLPA; FAD dependent oxidoreductase 5215668 5295663 Cbei_4508 Clostridium beijerinckii NCIMB 8052 FAD dependent oxidoreductase YP_001311573.1 5214241 R 290402 CDS YP_001311574.1 150019320 5295664 complement(5216000..5217499) 1 NC_009617.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase 5217499 glpK 5295664 glpK Clostridium beijerinckii NCIMB 8052 glycerol kinase YP_001311574.1 5216000 R 290402 CDS YP_001311575.1 150019321 5295665 complement(5217792..5218349) 1 NC_009617.1 PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: cac:CAC1320 glycerol-3-phosphate responsive antiterminator (mRNA-binding), GLPP; glycerol-3-phosphate responsive antiterminator 5218349 5295665 Cbei_4510 Clostridium beijerinckii NCIMB 8052 glycerol-3-phosphate responsive antiterminator YP_001311575.1 5217792 R 290402 CDS YP_001311576.1 150019322 5295666 complement(5218435..5219148) 1 NC_009617.1 TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: cac:CAC1319 glycerol uptake facilitator protein, GLPF; MIP family channel protein 5219148 5295666 Cbei_4511 Clostridium beijerinckii NCIMB 8052 MIP family channel protein YP_001311576.1 5218435 R 290402 CDS YP_001311577.1 150019323 5295667 complement(5219796..5221451) 1 NC_009617.1 PFAM: phosphoribulokinase/uridine kinase; KEGG: cac:CAC0672 fision threonyl-tRNA synthetase (N-terminal part) and uridine kinase; phosphoribulokinase/uridine kinase 5221451 5295667 Cbei_4512 Clostridium beijerinckii NCIMB 8052 phosphoribulokinase/uridine kinase YP_001311577.1 5219796 R 290402 CDS YP_001311578.1 150019324 5295668 5221845..5222543 1 NC_009617.1 PFAM: protein of unknown function DUF421; KEGG: cac:CAC0671 ortholog YrbG, YetE, YkjA, YdfS, YdfR B.subtilis; hypothetical protein 5222543 5295668 Cbei_4513 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311578.1 5221845 D 290402 CDS YP_001311579.1 150019325 5295669 5222540..5222920 1 NC_009617.1 KEGG: cpf:CPF_1556 hypothetical protein; hypothetical protein 5222920 5295669 Cbei_4514 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311579.1 5222540 D 290402 CDS YP_001311580.1 150019326 5295670 5223264..5224487 1 NC_009617.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 5224487 5295670 Cbei_4515 Clostridium beijerinckii NCIMB 8052 argininosuccinate synthase YP_001311580.1 5223264 D 290402 CDS YP_001311581.1 150019327 5295671 5224487..5225872 1 NC_009617.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 5225872 5295671 Cbei_4516 Clostridium beijerinckii NCIMB 8052 argininosuccinate lyase YP_001311581.1 5224487 D 290402 CDS YP_001311582.1 150019328 5295672 5226199..5227233 1 NC_009617.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 5227233 argC 5295672 argC Clostridium beijerinckii NCIMB 8052 N-acetyl-gamma-glutamyl-phosphate reductase YP_001311582.1 5226199 D 290402 CDS YP_001311583.1 150019329 5295673 5227289..5228554 1 NC_009617.1 TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; KEGG: tte:TTE2497 predicted kinase related to thiamine pyrophosphokinase; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 5228554 5295673 Cbei_4518 Clostridium beijerinckii NCIMB 8052 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_001311583.1 5227289 D 290402 CDS YP_001311584.1 150019330 5295674 5228651..5229508 1 NC_009617.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 5229508 5295674 Cbei_4519 Clostridium beijerinckii NCIMB 8052 acetylglutamate kinase YP_001311584.1 5228651 D 290402 CDS YP_001311585.1 150019331 5295675 5229623..5230804 1 NC_009617.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: hdu:HD0892 acetylornithine aminotransferase; acetylornithine and succinylornithine aminotransferase 5230804 5295675 Cbei_4520 Clostridium beijerinckii NCIMB 8052 acetylornithine and succinylornithine aminotransferase YP_001311585.1 5229623 D 290402 CDS YP_001311586.1 150019332 5295676 5230900..5231820 1 NC_009617.1 TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; KEGG: cth:Cthe_1869 ornithine carbamoyltransferase; ornithine carbamoyltransferase 5231820 5295676 Cbei_4521 Clostridium beijerinckii NCIMB 8052 ornithine carbamoyltransferase YP_001311586.1 5230900 D 290402 CDS YP_001311587.1 150019333 5295677 5232163..5233263 1 NC_009617.1 PFAM: Excinuclease ABC, C subunit domain protein; UvrB/UvrC protein; KEGG: cac:CAC3468 excinuclease ABC, subunit C (UvrC); excinuclease ABC subunit C 5233263 5295677 Cbei_4522 Clostridium beijerinckii NCIMB 8052 excinuclease ABC subunit C YP_001311587.1 5232163 D 290402 CDS YP_001311588.1 150019334 5295678 5233367..5233897 1 NC_009617.1 PFAM: nitroreductase; KEGG: ldb:Ldb1039 hypothetical protein; nitroreductase 5233897 5295678 Cbei_4523 Clostridium beijerinckii NCIMB 8052 nitroreductase YP_001311588.1 5233367 D 290402 CDS YP_001311589.1 150019335 5295679 5233986..5234612 1 NC_009617.1 PFAM: NADPH-dependent FMN reductase; KEGG: cac:CAC3341 multimeric flavodoxin WrbA family protein; NADPH-dependent FMN reductase 5234612 5295679 Cbei_4524 Clostridium beijerinckii NCIMB 8052 NADPH-dependent FMN reductase YP_001311589.1 5233986 D 290402 CDS YP_001311590.1 150019336 5295680 complement(5234835..5236205) 1 NC_009617.1 PFAM: glycoside hydrolase, family 1; KEGG: gka:GK2337 beta-glucosidase; glycoside hydrolase 5236205 5295680 Cbei_4525 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001311590.1 5234835 R 290402 CDS YP_001311591.1 150019337 5295681 5236364..5237053 1 NC_009617.1 PFAM: GntR family transcriptional regulator; UbiC transcription regulator-associated domain protein; KEGG: cpr:CPR_0527 trehalose operon transcriptional repressor; GntR family transcriptional regulator 5237053 5295681 Cbei_4526 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001311591.1 5236364 D 290402 CDS YP_001311592.1 150019338 5295682 complement(5237280..5238755) 1 NC_009617.1 PFAM: amino acid permease-associated region; KEGG: bce:BC3724 GABA-specific permease; amino acid permease-associated protein 5238755 5295682 Cbei_4527 Clostridium beijerinckii NCIMB 8052 amino acid permease-associated protein YP_001311592.1 5237280 R 290402 CDS YP_001311593.1 150019339 5295683 complement(5239034..5240353) 1 NC_009617.1 PFAM: major facilitator superfamily MFS_1; KEGG: bld:BLi04069 galactonate transporter; RBL01028; major facilitator superfamily transporter 5240353 5295683 Cbei_4528 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001311593.1 5239034 R 290402 CDS YP_001311594.1 150019340 5295684 complement(5240569..5242806) 1 NC_009617.1 KEGG: ppe:PEPE_0550 pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulfide oxidoreductase 5242806 5295684 Cbei_4529 Clostridium beijerinckii NCIMB 8052 pyridine nucleotide-disulfide oxidoreductase YP_001311594.1 5240569 R 290402 CDS YP_001311595.1 150019341 5295685 5243220..5244002 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: ppe:PEPE_0549 AraC family transcriptional regulator (HTH and ligand binding domain); helix-turn-helix domain-containing protein 5244002 5295685 Cbei_4530 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001311595.1 5243220 D 290402 CDS YP_001311596.1 150019342 5295686 complement(5244172..5245209) 1 NC_009617.1 KEGG: cpe:CPE1351 hypothetical protein; hypothetical protein 5245209 5295686 Cbei_4531 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311596.1 5244172 R 290402 CDS YP_001311597.1 150019343 5295687 complement(5245413..5246849) 1 NC_009617.1 TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: cpf:CPF_1070 PTS system, N-acetylglucosamine-specific IIBC component; PTS system N-acetylglucosamine-specific transporter subunit IIBC 5246849 5295687 Cbei_4532 Clostridium beijerinckii NCIMB 8052 PTS system N-acetylglucosamine-specific transporter subunit IIBC YP_001311597.1 5245413 R 290402 CDS YP_001311598.1 150019344 5295688 5247258..5247755 1 NC_009617.1 TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease, EIIA 1 domain; KEGG: cpf:CPF_0070 PTS system, N-acetylglucosamine-specific IIA component; PTS system glucose subfamily transporter subunit IIA 5247755 5295688 Cbei_4533 Clostridium beijerinckii NCIMB 8052 PTS system glucose subfamily transporter subunit IIA YP_001311598.1 5247258 D 290402 CDS YP_001311599.1 150019345 5295689 complement(5247802..5248656) 1 NC_009617.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: cac:CAC1355 transcriptional antiterminator (BglG family); transcriptional antiterminator BglG 5248656 5295689 Cbei_4534 Clostridium beijerinckii NCIMB 8052 transcriptional antiterminator BglG YP_001311599.1 5247802 R 290402 CDS YP_001311600.1 150019346 5295690 complement(5249093..5250379) 1 NC_009617.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system, EIIC; KEGG: lin:lin2832 similar to cellobiose phosphotransferase enzyme IIC component; PTS system lactose/cellobiose family transporter subunit IIC 5250379 5295690 Cbei_4535 Clostridium beijerinckii NCIMB 8052 PTS system lactose/cellobiose family transporter subunit IIC YP_001311600.1 5249093 R 290402 CDS YP_001311601.1 150019347 5295691 complement(5250465..5251367) 1 NC_009617.1 PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: bcz:BCZK2215 possible ATPase family protein; BadF/BadG/BcrA/BcrD type ATPase 5251367 5295691 Cbei_4536 Clostridium beijerinckii NCIMB 8052 BadF/BadG/BcrA/BcrD type ATPase YP_001311601.1 5250465 R 290402 CDS YP_001311602.1 150019348 5295692 complement(5251413..5251724) 1 NC_009617.1 PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: cpe:CPE2577 PTS system, cellobiose-specific II component; PTS system lactose/cellobiose-specific transporter subunit IIA 5251724 5295692 Cbei_4537 Clostridium beijerinckii NCIMB 8052 PTS system lactose/cellobiose-specific transporter subunit IIA YP_001311602.1 5251413 R 290402 CDS YP_001311603.1 150019349 5295693 complement(5251745..5252056) 1 NC_009617.1 PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: lwe:lwe2632 PTS system, beta-glucoside-specific, IIB component; phosphotransferase system, lactose/cellobiose-specific IIB subunit 5252056 5295693 Cbei_4538 Clostridium beijerinckii NCIMB 8052 phosphotransferase system, lactose/cellobiose-specific IIB subunit YP_001311603.1 5251745 R 290402 CDS YP_001311604.1 150019350 5295694 complement(5252248..5254998) 1 NC_009617.1 PFAM: sigma-54 factor, interaction domain-containing protein; PTS system fructose subfamily IIA component; PRD domain protein; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; KEGG: lmo:lmo1721 hypothetical protein; sigma-54 factor interaction domain-containing protein 5254998 5295694 Cbei_4539 Clostridium beijerinckii NCIMB 8052 sigma-54 factor interaction domain-containing protein YP_001311604.1 5252248 R 290402 CDS YP_001311605.1 150019351 5295695 5255404..5255964 1 NC_009617.1 PFAM: adenylate cyclase; KEGG: cpf:CPF_1559 adenylate cyclase; adenylate cyclase 5255964 5295695 Cbei_4540 Clostridium beijerinckii NCIMB 8052 adenylate cyclase YP_001311605.1 5255404 D 290402 CDS YP_001311606.1 150019352 5295696 5256114..5258075 1 NC_009617.1 PFAM: fructose-1,6-bisphosphatase; KEGG: cac:CAC1572 fructose-1,6-bisphosphatase; fructose-1,6-bisphosphatase 5258075 5295696 Cbei_4541 Clostridium beijerinckii NCIMB 8052 fructose-1,6-bisphosphatase YP_001311606.1 5256114 D 290402 CDS YP_001311607.1 150019353 5295697 complement(5258380..5259519) 1 NC_009617.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: cpe:CPE0097 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 5259519 5295697 Cbei_4542 Clostridium beijerinckii NCIMB 8052 acyl-CoA dehydrogenase domain-containing protein YP_001311607.1 5258380 R 290402 CDS YP_001311608.1 150019354 5295698 complement(5259629..5261182) 1 NC_009617.1 PFAM: coenzyme A transferase; KEGG: cpe:CPE0096 propionate CoA-transferase; coenzyme A transferase 5261182 5295698 Cbei_4543 Clostridium beijerinckii NCIMB 8052 coenzyme A transferase YP_001311608.1 5259629 R 290402 CDS YP_001311609.1 150019355 5295699 complement(5261233..5262009) 1 NC_009617.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cpe:CPE0095 crotonase; enoyl-CoA hydratase/isomerase 5262009 5295699 Cbei_4544 Clostridium beijerinckii NCIMB 8052 enoyl-CoA hydratase/isomerase YP_001311609.1 5261233 R 290402 CDS YP_001311610.1 150019356 5295700 complement(5262301..5263731) 1 NC_009617.1 TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bld:BLi00603 YdjK; sugar transporter 5263731 5295700 Cbei_4545 Clostridium beijerinckii NCIMB 8052 sugar transporter YP_001311610.1 5262301 R 290402 CDS YP_001311611.1 150019357 5295701 complement(5263986..5264882) 1 NC_009617.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: cpf:CPF_0086 myo-inositol catabolism protein IolE; xylose isomerase domain-containing protein 5264882 5295701 Cbei_4546 Clostridium beijerinckii NCIMB 8052 xylose isomerase domain-containing protein YP_001311611.1 5263986 R 290402 CDS YP_001311612.1 150019358 5295702 complement(5264902..5265915) 1 NC_009617.1 PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: ctc:CTC00511 myo-inositol 2-dehydrogenase; oxidoreductase domain-containing protein 5265915 5295702 Cbei_4547 Clostridium beijerinckii NCIMB 8052 oxidoreductase domain-containing protein YP_001311612.1 5264902 R 290402 CDS YP_001311613.1 150019359 5295703 complement(5265930..5267861) 1 NC_009617.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein, central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: cpe:CPE0089 myo-inositol catabolism protein; thiamine pyrophosphate protein, central region 5267861 5295703 Cbei_4548 Clostridium beijerinckii NCIMB 8052 thiamine pyrophosphate protein, central region YP_001311613.1 5265930 R 290402 CDS YP_001311614.1 150019360 5295704 complement(5267876..5268664) 1 NC_009617.1 PFAM: Myo-inositol catabolism IolB domain protein; KEGG: ctc:CTC00509 myo-inositol catabolism protein iolB; myo-inositol catabolism IolB domain-containing protein 5268664 5295704 Cbei_4549 Clostridium beijerinckii NCIMB 8052 myo-inositol catabolism IolB domain-containing protein YP_001311614.1 5267876 R 290402 CDS YP_001311615.1 150019361 5295705 complement(5268679..5269698) 1 NC_009617.1 PFAM: PfkB domain protein; KEGG: cpf:CPF_0082 myo-inositol catabolism protein IolC; ribokinase-like domain-containing protein 5269698 5295705 Cbei_4550 Clostridium beijerinckii NCIMB 8052 ribokinase-like domain-containing protein YP_001311615.1 5268679 R 290402 CDS YP_001311616.1 150019362 5295706 complement(5269699..5270556) 1 NC_009617.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 5270556 5295706 Cbei_4551 Clostridium beijerinckii NCIMB 8052 fructose-bisphosphate aldolase YP_001311616.1 5269699 R 290402 CDS YP_001311617.1 150019363 5295707 complement(5270562..5271716) 1 NC_009617.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: cpf:CPF_0080 alcohol dehydrogenase, iron-containing; iron-containing alcohol dehydrogenase 5271716 5295707 Cbei_4552 Clostridium beijerinckii NCIMB 8052 iron-containing alcohol dehydrogenase YP_001311617.1 5270562 R 290402 CDS YP_001311618.1 150019364 5295708 5271954..5272721 1 NC_009617.1 PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: cpe:CPE0084 transcription repressor of myo-inositol catabolism operon; DeoR family transcriptional regulator 5272721 5295708 Cbei_4553 Clostridium beijerinckii NCIMB 8052 DeoR family transcriptional regulator YP_001311618.1 5271954 D 290402 CDS YP_001311619.1 150019365 5295709 complement(5272906..5273535) 1 NC_009617.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ste:STER_0426 predicted sugar phosphatase of HAD family; HAD family hydrolase 5273535 5295709 Cbei_4554 Clostridium beijerinckii NCIMB 8052 HAD family hydrolase YP_001311619.1 5272906 R 290402 CDS YP_001311620.1 150019366 5295710 complement(5273552..5276299) 1 NC_009617.1 PFAM: sigma-54 factor, interaction domain-containing protein; PTS system fructose subfamily IIA component; PRD domain protein; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; KEGG: stm:STM4534 transcriptional regulator; sigma-54 factor interaction domain-containing protein 5276299 5295710 Cbei_4555 Clostridium beijerinckii NCIMB 8052 sigma-54 factor interaction domain-containing protein YP_001311620.1 5273552 R 290402 CDS YP_001311621.1 150019367 5295711 complement(5276617..5277585) 1 NC_009617.1 PFAM: sugar isomerase (SIS); KEGG: stm:STM3601 phosphosugar isomerase; sugar isomerase (SIS) 5277585 5295711 Cbei_4556 Clostridium beijerinckii NCIMB 8052 sugar isomerase (SIS) YP_001311621.1 5276617 R 290402 CDS YP_001311622.1 150019368 5295712 complement(5277649..5278473) 1 NC_009617.1 PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: ppe:PEPE_0198 mannose-specific PTS system component IID; PTS system mannose/fructose/sorbose family transporter subunit IID 5278473 5295712 Cbei_4557 Clostridium beijerinckii NCIMB 8052 PTS system mannose/fructose/sorbose family transporter subunit IID YP_001311622.1 5277649 R 290402 CDS YP_001311623.1 150019369 5295713 complement(5278488..5279252) 1 NC_009617.1 PFAM: phosphotransferase system PTS, sorbose-specific IIC subunit; KEGG: ppe:PEPE_0197 mannose-specific PTS system component IIC; PTS system sorbose-specific transporter subunit IIC 5279252 5295713 Cbei_4558 Clostridium beijerinckii NCIMB 8052 PTS system sorbose-specific transporter subunit IIC YP_001311623.1 5278488 R 290402 CDS YP_001311624.1 150019370 5295714 complement(5279268..5279738) 1 NC_009617.1 PFAM: PTS system sorbose subfamily IIB component; KEGG: stm:STM0576 PTS system, mannose-specific II component; PTS system sorbose subfamily transporter subunit IIB 5279738 5295714 Cbei_4559 Clostridium beijerinckii NCIMB 8052 PTS system sorbose subfamily transporter subunit IIB YP_001311624.1 5279268 R 290402 CDS YP_001311625.1 150019371 5295715 complement(5279735..5280157) 1 NC_009617.1 PFAM: PTS system fructose subfamily IIA component; KEGG: fnu:FN0632 PTS system, IIA component; PTS system fructose subfamily transporter subunit IIA 5280157 5295715 Cbei_4560 Clostridium beijerinckii NCIMB 8052 PTS system fructose subfamily transporter subunit IIA YP_001311625.1 5279735 R 290402 CDS YP_001311626.1 150019372 5295716 complement(5280441..5281151) 1 NC_009617.1 PFAM: GntR family transcriptional regulator; UbiC transcription regulator-associated domain protein; KEGG: gka:GK1855 transcriptional regulator (GntR family); GntR family transcriptional regulator 5281151 5295716 Cbei_4561 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001311626.1 5280441 R 290402 CDS YP_001311627.1 150019373 5295717 complement(5281548..5282276) 1 NC_009617.1 TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: tte:TTE1023 6-phosphogluconolactonase/Glucosamine-6- phosphate isomerase/deaminase; glucosamine-6-phosphate isomerase 5282276 5295717 Cbei_4562 Clostridium beijerinckii NCIMB 8052 glucosamine-6-phosphate isomerase YP_001311627.1 5281548 R 290402 CDS YP_001311628.1 150019374 5295718 complement(5282298..5283023) 1 NC_009617.1 PFAM: GntR family transcriptional regulator; UbiC transcription regulator-associated domain protein; KEGG: cpr:CPR_2646 transcriptional regulator, GntR family; GntR family transcriptional regulator 5283023 5295718 Cbei_4563 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001311628.1 5282298 R 290402 CDS YP_001311629.1 150019375 5295719 5283331..5284467 1 NC_009617.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; KEGG: cpf:CPF_2434 N-acetylglucosamine-6-phosphate deacetylase; N-acetylglucosamine-6-phosphate deacetylase 5284467 5295719 Cbei_4564 Clostridium beijerinckii NCIMB 8052 N-acetylglucosamine-6-phosphate deacetylase YP_001311629.1 5283331 D 290402 CDS YP_001311630.1 150019376 5295720 complement(5284705..5285613) 1 NC_009617.1 PFAM: ROK family protein; KEGG: gka:GK0217 transcriptional regulator; ROK family protein 5285613 5295720 Cbei_4565 Clostridium beijerinckii NCIMB 8052 ROK family protein YP_001311630.1 5284705 R 290402 CDS YP_001311631.1 150019377 5295721 complement(5285721..5287118) 1 NC_009617.1 PFAM: glycoside hydrolase, family 1; KEGG: cpf:CPF_2609 glycosyl hydrolase, family 1; beta-glucosidase 5287118 5295721 Cbei_4566 Clostridium beijerinckii NCIMB 8052 beta-glucosidase YP_001311631.1 5285721 R 290402 CDS YP_001311632.1 150019378 5295722 complement(5287202..5287978) 1 NC_009617.1 PFAM: ROK family protein; KEGG: bha:BH0797 glucose kinase; ROK family protein 5287978 5295722 Cbei_4567 Clostridium beijerinckii NCIMB 8052 ROK family protein YP_001311632.1 5287202 R 290402 CDS YP_001311633.1 150019379 5295723 complement(5288329..5289162) 1 NC_009617.1 PFAM: Prephenate dehydrogenase; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: cno:NT01CX_0626 prephenate dehydrogenase; prephenate dehydrogenase 5289162 5295723 Cbei_4568 Clostridium beijerinckii NCIMB 8052 prephenate dehydrogenase YP_001311633.1 5288329 R 290402 CDS YP_001311634.1 150019380 5295724 complement(5289186..5290199) 1 NC_009617.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase 5290199 5295724 Cbei_4569 Clostridium beijerinckii NCIMB 8052 3-deoxy-7-phosphoheptulonate synthase YP_001311634.1 5289186 R 290402 CDS YP_001311635.1 150019381 5295725 complement(5290351..5290791) 1 NC_009617.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 5290791 5295725 Cbei_4570 Clostridium beijerinckii NCIMB 8052 3-dehydroquinate dehydratase YP_001311635.1 5290351 R 290402 CDS YP_001311636.1 150019382 5295726 complement(5291039..5291548) 1 NC_009617.1 PFAM: shikimate kinase; KEGG: cno:NT01CX_0620 shikimate kinase; shikimate kinase 5291548 5295726 Cbei_4571 Clostridium beijerinckii NCIMB 8052 shikimate kinase YP_001311636.1 5291039 R 290402 CDS YP_001311637.1 150019383 5295727 complement(5291558..5292370) 1 NC_009617.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding, N-terminal domain protein; KEGG: cpf:CPF_0693 shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 5292370 5295727 Cbei_4572 Clostridium beijerinckii NCIMB 8052 shikimate 5-dehydrogenase YP_001311637.1 5291558 R 290402 CDS YP_001311638.1 150019384 5295728 complement(5292385..5293524) 1 NC_009617.1 TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: det:DET0461 chorismate mutase / prephenate dehydratase; chorismate mutase 5293524 5295728 Cbei_4573 Clostridium beijerinckii NCIMB 8052 chorismate mutase YP_001311638.1 5292385 R 290402 CDS YP_001311639.1 150019385 5295729 complement(5293674..5294747) 1 NC_009617.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 5294747 5295729 Cbei_4574 Clostridium beijerinckii NCIMB 8052 chorismate synthase YP_001311639.1 5293674 R 290402 CDS YP_001311640.1 150019386 5295730 complement(5294725..5296032) 1 NC_009617.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 5296032 5295730 Cbei_4575 Clostridium beijerinckii NCIMB 8052 3-phosphoshikimate 1-carboxyvinyltransferase YP_001311640.1 5294725 R 290402 CDS YP_001311641.1 150019387 5295731 complement(5296119..5297171) 1 NC_009617.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 5297171 aroB 5295731 aroB Clostridium beijerinckii NCIMB 8052 3-dehydroquinate synthase YP_001311641.1 5296119 R 290402 CDS YP_001311642.1 150019388 5295732 complement(5297299..5298312) 1 NC_009617.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase 5298312 5295732 Cbei_4577 Clostridium beijerinckii NCIMB 8052 3-deoxy-7-phosphoheptulonate synthase YP_001311642.1 5297299 R 290402 CDS YP_001311643.1 150019389 5295733 5299256..5299972 1 NC_009617.1 essential for production of a quorum sensing autoinducing peptide; accessory gene regulator protein 5299972 5295733 Cbei_4578 Clostridium beijerinckii NCIMB 8052 accessory gene regulator protein YP_001311643.1 5299256 D 290402 CDS YP_001311644.1 150019390 5295734 5300673..5301992 1 NC_009617.1 KEGG: lin:lin0043 similar to sensor histidine kinase (AgrC from Staphylococcus); sensor histidine kinase-like protein 5301992 5295734 Cbei_4579 Clostridium beijerinckii NCIMB 8052 sensor histidine kinase-like protein YP_001311644.1 5300673 D 290402 CDS YP_001311645.1 150019391 5295735 5302002..5302733 1 NC_009617.1 PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: cac:CAC0081 accessory gene regulator protein A; LytTR family two component transcriptional regulator 5302733 5295735 Cbei_4580 Clostridium beijerinckii NCIMB 8052 LytTR family two component transcriptional regulator YP_001311645.1 5302002 D 290402 CDS YP_001311646.1 150019392 5296438 complement(5304467..5306089) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: tte:TTE2354 ABC-type multidrug/protein/lipid transport system, ATPase component; ABC transporter 5306089 5296438 Cbei_4582 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001311646.1 5304467 R 290402 CDS YP_001311647.1 150019393 5295737 complement(5306101..5307531) 1 NC_009617.1 KEGG: cpe:CPE0306 ABC-2 type transport system permease; hypothetical protein 5307531 5295737 Cbei_4583 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311647.1 5306101 R 290402 CDS YP_001311648.1 150019394 5295738 complement(5307647..5308393) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ctc:CTC00240 ABC transporter ATP-binding protein; ABC transporter 5308393 5295738 Cbei_4584 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001311648.1 5307647 R 290402 CDS YP_001311649.1 150019395 5295739 complement(5308416..5309132) 1 NC_009617.1 PFAM: NADPH-dependent FMN reductase; KEGG: spd:SPD_1750 multimeric flavodoxin WrbA (general function prediction only); NADPH-dependent FMN reductase 5309132 5295739 Cbei_4585 Clostridium beijerinckii NCIMB 8052 NADPH-dependent FMN reductase YP_001311649.1 5308416 R 290402 CDS YP_001311650.1 150019396 5295740 complement(5309166..5312135) 1 NC_009617.1 KEGG: efa:EF0527 CylM protein; lantibiotic modifying -like protein 5312135 5295740 Cbei_4586 Clostridium beijerinckii NCIMB 8052 lantibiotic modifying -like protein YP_001311650.1 5309166 R 290402 CDS YP_001311651.1 150019397 5295741 complement(5312234..5312395) 1 NC_009617.1 hypothetical protein 5312395 5295741 Cbei_4587 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311651.1 5312234 R 290402 CDS YP_001311652.1 150019398 5295742 complement(5312697..5313857) 1 NC_009617.1 PFAM: proton/sugar symporter, LacY; major facilitator superfamily MFS_1; KEGG: oih:OB0724 hypothetical protein; major facilitator superfamily transporter 5313857 5295742 Cbei_4588 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001311652.1 5312697 R 290402 CDS YP_001311653.1 150019399 5295743 complement(5314122..5315555) 1 NC_009617.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: cpr:CPR_1418 cardiolipin synthetase; phospholipase D/transphosphatidylase 5315555 5295743 Cbei_4589 Clostridium beijerinckii NCIMB 8052 phospholipase D/transphosphatidylase YP_001311653.1 5314122 R 290402 CDS YP_001311654.1 150019400 5295744 5316208..5318658 1 NC_009617.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 5318658 leuS 5295744 leuS Clostridium beijerinckii NCIMB 8052 leucyl-tRNA synthetase YP_001311654.1 5316208 D 290402 CDS YP_001311655.1 150019401 5295745 complement(5318876..5319562) 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dsy:DSY3866 hypothetical protein; two component transcriptional regulator 5319562 5295745 Cbei_4591 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001311655.1 5318876 R 290402 CDS YP_001311656.1 150019402 5295746 complement(5319719..5320954) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: dsy:DSY3867 hypothetical protein; integral membrane sensor signal transduction histidine kinase 5320954 5295746 Cbei_4592 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001311656.1 5319719 R 290402 CDS YP_001311657.1 150019403 5295747 complement(5321396..5322073) 1 NC_009617.1 hypothetical protein 5322073 5295747 Cbei_4593 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311657.1 5321396 R 290402 CDS YP_001311658.1 150019404 5295748 complement(5322287..5323231) 1 NC_009617.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: cno:NT01CX_0601 D-isomer specific 2-hydroxyacid dehydrogenases; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 5323231 5295748 Cbei_4594 Clostridium beijerinckii NCIMB 8052 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit YP_001311658.1 5322287 R 290402 CDS YP_001311659.1 150019405 5295749 complement(5323754..5324275) 1 NC_009617.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 5324275 dcd 5295749 dcd Clostridium beijerinckii NCIMB 8052 deoxycytidine triphosphate deaminase YP_001311659.1 5323754 R 290402 CDS YP_001311660.1 150019406 5295750 complement(5324391..5325134) 1 NC_009617.1 KEGG: cpe:CPE0665 hypothetical protein; hypothetical protein 5325134 5295750 Cbei_4596 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311660.1 5324391 R 290402 CDS YP_001311661.1 150019407 5295751 5325387..5325716 1 NC_009617.1 TIGRFAM: HesB-related (seleno)protein; KEGG: cpr:CPR_0641 HesB-related selenoprotein; HesB-like (seleno)protein 5325716 5295751 Cbei_4597 Clostridium beijerinckii NCIMB 8052 HesB-like (seleno)protein YP_001311661.1 5325387 D 290402 CDS YP_001311662.1 150019408 5295752 complement(5325843..5326514) 1 NC_009617.1 hypothetical protein 5326514 5295752 Cbei_4598 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311662.1 5325843 R 290402 CDS YP_001311663.1 150019409 5295753 complement(5326594..5327928) 1 NC_009617.1 KEGG: cpe:CPE0657 hypothetical protein; hypothetical protein 5327928 5295753 Cbei_4599 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311663.1 5326594 R 290402 CDS YP_001311664.1 150019410 5295754 complement(5327984..5329072) 1 NC_009617.1 PFAM: ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; KEGG: cpr:CPR_0623 hypothetical protein; ATPase 5329072 5295754 Cbei_4600 Clostridium beijerinckii NCIMB 8052 ATPase YP_001311664.1 5327984 R 290402 CDS YP_001311665.1 150019411 5295755 complement(5329090..5329869) 1 NC_009617.1 KEGG: cpr:CPR_0622 hypothetical protein; hypothetical protein 5329869 5295755 Cbei_4601 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311665.1 5329090 R 290402 CDS YP_001311666.1 150019412 5295756 complement(5330402..5331235) 1 NC_009617.1 PFAM: RelA/SpoT domain protein; KEGG: cpr:CPR_0621 RelA/SpoT family protein; RelA/SpoT domain-containing protein 5331235 5295756 Cbei_4602 Clostridium beijerinckii NCIMB 8052 RelA/SpoT domain-containing protein YP_001311666.1 5330402 R 290402 CDS YP_001311667.1 150019413 5295757 5331397..5332077 1 NC_009617.1 KEGG: cno:NT01CX_1368 hypothetical protein; hypothetical protein 5332077 5295757 Cbei_4603 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311667.1 5331397 D 290402 CDS YP_001311668.1 150019414 5295758 5332117..5333070 1 NC_009617.1 PFAM: chemotaxis sensory transducer; KEGG: cac:CAC0443 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 5333070 5295758 Cbei_4604 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001311668.1 5332117 D 290402 CDS YP_001311669.1 150019415 5295759 complement(5333160..5334038) 1 NC_009617.1 PFAM: Aldose 1-epimerase; KEGG: cpf:CPF_0279 aldose 1-epimerase; aldose 1-epimerase 5334038 5295759 Cbei_4605 Clostridium beijerinckii NCIMB 8052 aldose 1-epimerase YP_001311669.1 5333160 R 290402 CDS YP_001311670.1 150019416 5295760 complement(5334220..5334909) 1 NC_009617.1 PFAM: metallophosphoesterase; KEGG: cpr:CPR_0620 Ser/Thr protein phosphatase family protein; metallophosphoesterase 5334909 5295760 Cbei_4606 Clostridium beijerinckii NCIMB 8052 metallophosphoesterase YP_001311670.1 5334220 R 290402 CDS YP_001311671.1 150019417 5295761 complement(5334937..5335197) 1 NC_009617.1 KEGG: cno:NT01CX_1366 flagella-associated protein; flagella-associated protein 5335197 5295761 Cbei_4607 Clostridium beijerinckii NCIMB 8052 flagella-associated protein YP_001311671.1 5334937 R 290402 CDS YP_001311672.1 150019418 5295762 complement(5335339..5337222) 1 NC_009617.1 KEGG: cac:CAC0638 hypothetical protein; hypothetical protein 5337222 5295762 Cbei_4608 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311672.1 5335339 R 290402 CDS YP_001311673.1 150019419 5295763 complement(5337504..5338574) 1 NC_009617.1 catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase 5338574 5295763 Cbei_4609 Clostridium beijerinckii NCIMB 8052 butyrate kinase YP_001311673.1 5337504 R 290402 CDS YP_001311674.1 150019420 5295764 complement(5339007..5339234) 1 NC_009617.1 KEGG: cac:CAC1487 uncharacterized protein, similar to TlpA of B.subtilis; small acid-soluble spore protein Tlp 5339234 5295764 Cbei_4610 Clostridium beijerinckii NCIMB 8052 small acid-soluble spore protein Tlp YP_001311674.1 5339007 R 290402 CDS YP_001311675.1 150019421 5295765 5339430..5339618 1 NC_009617.1 hypothetical protein 5339618 5295765 Cbei_4611 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311675.1 5339430 D 290402 CDS YP_001311676.1 150019422 5295766 5339655..5339930 1 NC_009617.1 PFAM: Coat F domain protein; KEGG: cac:CAC2780 spore coat protein, CotF related; coat F domain-containing protein 5339930 5295766 Cbei_4612 Clostridium beijerinckii NCIMB 8052 coat F domain-containing protein YP_001311676.1 5339655 D 290402 CDS YP_001311677.1 150019423 5295767 5339979..5340215 1 NC_009617.1 hypothetical protein 5340215 5295767 Cbei_4613 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311677.1 5339979 D 290402 CDS YP_001311678.1 150019424 5295768 5340234..5340524 1 NC_009617.1 PFAM: Coat F domain protein; KEGG: cac:CAC2780 spore coat protein, CotF related; coat F domain-containing protein 5340524 5295768 Cbei_4614 Clostridium beijerinckii NCIMB 8052 coat F domain-containing protein YP_001311678.1 5340234 D 290402 CDS YP_001311679.1 150019425 5295769 complement(5340786..5342006) 1 NC_009617.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 5342006 5295769 Cbei_4615 Clostridium beijerinckii NCIMB 8052 tyrosyl-tRNA synthetase YP_001311679.1 5340786 R 290402 CDS YP_001311680.1 150019426 5295770 complement(5342304..5343452) 1 NC_009617.1 PFAM: AAA-4 family protein; KEGG: cno:NT01CX_1362 divergent AAA domain family; transcriptional regulator 5343452 5295770 Cbei_4616 Clostridium beijerinckii NCIMB 8052 transcriptional regulator YP_001311680.1 5342304 R 290402 CDS YP_001311681.1 150019427 5295771 complement(5343659..5344741) 1 NC_009617.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cno:NT01CX_1361 signal transduction protein containing diguanilate cyclase/phosphodiesterase domain; diguanylate cyclase 5344741 5295771 Cbei_4617 Clostridium beijerinckii NCIMB 8052 diguanylate cyclase YP_001311681.1 5343659 R 290402 CDS YP_001311682.1 150019428 5295772 complement(5345374..5346249) 1 NC_009617.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: cpf:CPF_0487 UTP-glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase 5346249 5295772 Cbei_4618 Clostridium beijerinckii NCIMB 8052 UTP-glucose-1-phosphate uridylyltransferase YP_001311682.1 5345374 R 290402 CDS YP_001311683.1 150019429 5295773 complement(5346433..5347521) 1 NC_009617.1 PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: cno:NT01CX_1781 lipopolysaccharide biosynthesis protein; oxidoreductase domain-containing protein 5347521 5295773 Cbei_4619 Clostridium beijerinckii NCIMB 8052 oxidoreductase domain-containing protein YP_001311683.1 5346433 R 290402 CDS YP_001311684.1 150019430 5295774 complement(5347762..5348367) 1 NC_009617.1 PFAM: sugar transferase; KEGG: bth:BT_0611 glycosyltransferase; sugar transferase 5348367 5295774 Cbei_4620 Clostridium beijerinckii NCIMB 8052 sugar transferase YP_001311684.1 5347762 R 290402 CDS YP_001311685.1 150019431 5295775 complement(5348478..5349695) 1 NC_009617.1 PFAM: glycosyl transferase, group 1; KEGG: plu:plu4805 WblI protein; group 1 glycosyl transferase 5349695 5295775 Cbei_4621 Clostridium beijerinckii NCIMB 8052 group 1 glycosyl transferase YP_001311685.1 5348478 R 290402 CDS YP_001311686.1 150019432 5295776 complement(5350144..5351853) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: pfa:PFB0150c protein kinase; cell wall binding repeat-containing protein 5351853 5295776 Cbei_4622 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311686.1 5350144 R 290402 CDS YP_001311687.1 150019433 5295777 complement(5352012..5353097) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: cac:CAC1079 uncharacterized protein, related to enterotoxins of other Clostridiales; cell wall binding repeat-containing protein 5353097 5295777 Cbei_4623 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311687.1 5352012 R 290402 CDS YP_001311688.1 150019434 5295778 complement(5353276..5354670) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: ctc:CTC00412 alkaline phosphatase synthesis sensor protein PhoR; integral membrane sensor signal transduction histidine kinase 5354670 5295778 Cbei_4624 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001311688.1 5353276 R 290402 CDS YP_001311689.1 150019435 5295779 complement(5354697..5355425) 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ctc:CTC00411 alkaline phosphatase synthesis transcriptional regulatory protein PhoP; two component transcriptional regulator 5355425 5295779 Cbei_4625 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001311689.1 5354697 R 290402 CDS YP_001311690.1 150019436 5295780 complement(5355988..5357244) 1 NC_009617.1 PFAM: glycosyl transferase, group 1; KEGG: bce:BC5269 amylovoran biosynthesis AmsK; group 1 glycosyl transferase 5357244 5295780 Cbei_4626 Clostridium beijerinckii NCIMB 8052 group 1 glycosyl transferase YP_001311690.1 5355988 R 290402 CDS YP_001311691.1 150019437 5295781 5357783..5358847 1 NC_009617.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: mmp:MMP0357 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 5358847 5295781 Cbei_4627 Clostridium beijerinckii NCIMB 8052 UDP-N-acetylglucosamine 2-epimerase YP_001311691.1 5357783 D 290402 CDS YP_001311692.1 150019438 5295782 complement(5359002..5360507) 1 NC_009617.1 KEGG: bsu:BG12692 biosynthesis of teichuronic acid, polymerization; hypothetical protein 5360507 5295782 Cbei_4628 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311692.1 5359002 R 290402 CDS YP_001311693.1 150019439 5295783 complement(5360510..5362372) 1 NC_009617.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: cpe:CPE0463 capsular polysaccharide biosynthesis protein; polysaccharide biosynthesis protein CapD 5362372 5295783 Cbei_4629 Clostridium beijerinckii NCIMB 8052 polysaccharide biosynthesis protein CapD YP_001311693.1 5360510 R 290402 CDS YP_001311694.1 150019440 5295784 complement(5362427..5363410) 1 NC_009617.1 PFAM: glycosyl transferase, family 2; KEGG: cpf:CPF_0715 glycosyl transferase, group 2 family protein; glycosyl transferase family protein 5363410 5295784 Cbei_4630 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001311694.1 5362427 R 290402 CDS YP_001311695.1 150019441 5295785 complement(5363861..5364709) 1 NC_009617.1 PFAM: LicD family protein; KEGG: cpr:CPR_0589 LicD family protein; LicD family protein 5364709 5295785 Cbei_4631 Clostridium beijerinckii NCIMB 8052 LicD family protein YP_001311695.1 5363861 R 290402 CDS YP_001311696.1 150019442 5295786 5364921..5365889 1 NC_009617.1 PFAM: glycosyl transferase, family 2; KEGG: mla:Mlab_1428 hypothetical protein; glycosyl transferase family protein 5365889 5295786 Cbei_4632 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001311696.1 5364921 D 290402 CDS YP_001311697.1 150019443 5295787 5366205..5368049 1 NC_009617.1 PFAM: beta-lactamase domain protein; cell wall binding repeat-containing protein; KEGG: cpf:CPF_0611 cell wall binding repeat protein; beta-lactamase domain-containing protein 5368049 5295787 Cbei_4633 Clostridium beijerinckii NCIMB 8052 beta-lactamase domain-containing protein YP_001311697.1 5366205 D 290402 CDS YP_001311698.1 150019444 5295788 complement(5368167..5369495) 1 NC_009617.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system, EIIC; KEGG: efa:EF0292 PTS system, IIC component; PTS system lactose/cellobiose family transporter subunit IIC 5369495 5295788 Cbei_4634 Clostridium beijerinckii NCIMB 8052 PTS system lactose/cellobiose family transporter subunit IIC YP_001311698.1 5368167 R 290402 CDS YP_001311699.1 150019445 5295789 complement(5369583..5369891) 1 NC_009617.1 PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: cac:CAC0384 PTS system, cellobiose-specific component BII; phosphotransferase system, lactose/cellobiose-specific IIB subunit 5369891 5295789 Cbei_4635 Clostridium beijerinckii NCIMB 8052 phosphotransferase system, lactose/cellobiose-specific IIB subunit YP_001311699.1 5369583 R 290402 CDS YP_001311700.1 150019446 5295790 complement(5369972..5370292) 1 NC_009617.1 PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: cac:CAC0383 PTS cellobiose-specific component IIA; PTS system lactose/cellobiose-specific transporter subunit IIA 5370292 5295790 Cbei_4636 Clostridium beijerinckii NCIMB 8052 PTS system lactose/cellobiose-specific transporter subunit IIA YP_001311700.1 5369972 R 290402 CDS YP_001311701.1 150019447 5295791 complement(5370768..5370992) 1 NC_009617.1 KEGG: lwe:lwe2658 hypothetical protein; hypothetical protein 5370992 5295791 Cbei_4637 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311701.1 5370768 R 290402 CDS YP_001311702.1 150019448 5295792 complement(5371250..5372590) 1 NC_009617.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system, EIIC; KEGG: efa:EF0292 PTS system, IIC component; PTS system lactose/cellobiose family transporter subunit IIC 5372590 5295792 Cbei_4638 Clostridium beijerinckii NCIMB 8052 PTS system lactose/cellobiose family transporter subunit IIC YP_001311702.1 5371250 R 290402 CDS YP_001311703.1 150019449 5295793 complement(5372872..5373183) 1 NC_009617.1 PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: spd:SPD_0233 PTS system, IIB component; phosphotransferase system, lactose/cellobiose-specific IIB subunit 5373183 5295793 Cbei_4639 Clostridium beijerinckii NCIMB 8052 phosphotransferase system, lactose/cellobiose-specific IIB subunit YP_001311703.1 5372872 R 290402 CDS YP_001311704.1 150019450 5295794 complement(5373337..5373657) 1 NC_009617.1 PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: cac:CAC0383 PTS cellobiose-specific component IIA; PTS system lactose/cellobiose-specific transporter subunit IIA 5373657 5295794 Cbei_4640 Clostridium beijerinckii NCIMB 8052 PTS system lactose/cellobiose-specific transporter subunit IIA YP_001311704.1 5373337 R 290402 CDS YP_001311705.1 150019451 5295795 5374223..5376910 1 NC_009617.1 PFAM: sigma-54 factor, interaction domain-containing protein; PTS system fructose subfamily IIA component; PRD domain protein; SMART: ATPase AAA; KEGG: cac:CAC0382 possible transcriptional regulator of levanase operon, AAA-ATPase domain (NtrC family), fused to 2 BglG-like domains, ortholog of B.subtilis LevR; sigma-54 factor interaction domain-containing protein 5376910 5295795 Cbei_4641 Clostridium beijerinckii NCIMB 8052 sigma-54 factor interaction domain-containing protein YP_001311705.1 5374223 D 290402 CDS YP_001311706.1 150019452 5295796 complement(5376967..5377716) 1 NC_009617.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: cpr:CPR_2604 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 5377716 5295796 Cbei_4642 Clostridium beijerinckii NCIMB 8052 RpiR family transcriptional regulator YP_001311706.1 5376967 R 290402 CDS YP_001311707.1 150019453 5295797 complement(5378060..5379472) 1 NC_009617.1 PFAM: glycoside hydrolase, family 1; KEGG: bld:BLi04199 hypothetical protein; glycoside hydrolase 5379472 5295797 Cbei_4643 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001311707.1 5378060 R 290402 CDS YP_001311708.1 150019454 5295798 complement(5379807..5381798) 1 NC_009617.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; KEGG: cac:CAC1348 transketolase, TKT; transketolase 5381798 5295798 Cbei_4644 Clostridium beijerinckii NCIMB 8052 transketolase YP_001311708.1 5379807 R 290402 CDS YP_001311709.1 150019455 5295799 complement(5382275..5382922) 1 NC_009617.1 TIGRFAM: transaldolase; PFAM: Transaldolase; KEGG: lwe:lwe2691 transaldolase; transaldolase 5382922 5295799 Cbei_4645 Clostridium beijerinckii NCIMB 8052 transaldolase YP_001311709.1 5382275 R 290402 CDS YP_001311710.1 150019456 5295800 complement(5382962..5383504) 1 NC_009617.1 PFAM: sugar isomerase (SIS); KEGG: lbr:LVIS_0443 sugar phosphate isomerase; sugar isomerase (SIS) 5383504 5295800 Cbei_4646 Clostridium beijerinckii NCIMB 8052 sugar isomerase (SIS) YP_001311710.1 5382962 R 290402 CDS YP_001311711.1 150019457 5295801 complement(5383501..5384124) 1 NC_009617.1 PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: ooe:OEOE_0131 3-hexulose-6-phosphate synthase family protein; orotidine 5'-phosphate decarboxylase 5384124 5295801 Cbei_4647 Clostridium beijerinckii NCIMB 8052 orotidine 5'-phosphate decarboxylase YP_001311711.1 5383501 R 290402 CDS YP_001311712.1 150019458 5295802 complement(5384143..5385108) 1 NC_009617.1 PFAM: PfkB domain protein; KEGG: cac:CAC0395 2-keto-3-deoxygluconate kinase (gene kdgK); ribokinase-like domain-containing protein 5385108 5295802 Cbei_4648 Clostridium beijerinckii NCIMB 8052 ribokinase-like domain-containing protein YP_001311712.1 5384143 R 290402 CDS YP_001311713.1 150019459 5295803 complement(5385101..5385874) 1 NC_009617.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: lme:LEUM_0500 sugar phosphate isomerase/epimerase; xylose isomerase domain-containing protein 5385874 5295803 Cbei_4649 Clostridium beijerinckii NCIMB 8052 xylose isomerase domain-containing protein YP_001311713.1 5385101 R 290402 CDS YP_001311714.1 150019460 5295804 complement(5385887..5386936) 1 NC_009617.1 PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: cac:CAC0393 KDG operon repressor (gene kdgR), LacI family; LacI family transcriptional regulator 5386936 5295804 Cbei_4650 Clostridium beijerinckii NCIMB 8052 LacI family transcriptional regulator YP_001311714.1 5385887 R 290402 CDS YP_001311715.1 150019461 5295805 complement(5387318..5388604) 1 NC_009617.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pau:PA14_35330 2-ketogluconate transporter; major facilitator superfamily transporter 5388604 5295805 Cbei_4651 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001311715.1 5387318 R 290402 CDS YP_001311716.1 150019462 5295806 complement(5389050..5389910) 1 NC_009617.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: lpl:lp_0805 hydrolase, HAD superfamily, Cof family; cof family hydrolase 5389910 5295806 Cbei_4652 Clostridium beijerinckii NCIMB 8052 cof family hydrolase YP_001311716.1 5389050 R 290402 CDS YP_001311717.1 150019463 5295807 complement(5390233..5392722) 1 NC_009617.1 PFAM: glycoside hydrolase, family 31; KEGG: lbr:LVIS_0137 alpha-glucosidase, family 31 of glycosyl hydrolase; Alpha-glucosidase 5392722 5295807 Cbei_4653 Clostridium beijerinckii NCIMB 8052 Alpha-glucosidase YP_001311717.1 5390233 R 290402 CDS YP_001311718.1 150019464 5295808 complement(5392820..5393761) 1 NC_009617.1 KEGG: pac:PPA0594 lysophospholipase; lysophospholipase 5393761 5295808 Cbei_4654 Clostridium beijerinckii NCIMB 8052 lysophospholipase YP_001311718.1 5392820 R 290402 CDS YP_001311719.1 150019465 5295809 complement(5394111..5396621) 1 NC_009617.1 PFAM: glycoside hydrolase, family 31; KEGG: lbr:LVIS_0137 alpha-glucosidase, family 31 of glycosyl hydrolase; Alpha-glucosidase 5396621 5295809 Cbei_4655 Clostridium beijerinckii NCIMB 8052 Alpha-glucosidase YP_001311719.1 5394111 R 290402 CDS YP_001311720.1 150019466 5295810 complement(5396804..5398333) 1 NC_009617.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3560 oligogalacturonide transporter; major facilitator superfamily transporter 5398333 5295810 Cbei_4656 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001311720.1 5396804 R 290402 CDS YP_001311721.1 150019467 5295811 complement(5398383..5399795) 1 NC_009617.1 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 5399795 5295811 Cbei_4657 Clostridium beijerinckii NCIMB 8052 glucuronate isomerase YP_001311721.1 5398383 R 290402 CDS YP_001311722.1 150019468 5295812 complement(5400157..5401770) 1 NC_009617.1 PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain; KEGG: mta:Moth_0429 mannitol dehydrogenase; mannitol dehydrogenase domain-containing protein 5401770 5295812 Cbei_4658 Clostridium beijerinckii NCIMB 8052 mannitol dehydrogenase domain-containing protein YP_001311722.1 5400157 R 290402 CDS YP_001311723.1 150019469 5295813 complement(5401890..5402951) 1 NC_009617.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase 5402951 5295813 Cbei_4659 Clostridium beijerinckii NCIMB 8052 mannonate dehydratase YP_001311723.1 5401890 R 290402 CDS YP_001311724.1 150019470 5295814 complement(5403130..5403804) 1 NC_009617.1 PFAM: GntR family transcriptional regulator; GntR domain protein; KEGG: bld:BLi01354 hypothetical protein; GntR family transcriptional regulator 5403804 5295814 Cbei_4660 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001311724.1 5403130 R 290402 CDS YP_001311725.1 150019471 5295815 5404143..5405018 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: cac:CAC1333 AraC-type sugar metabolism regulator; helix-turn-helix domain-containing protein 5405018 5295815 Cbei_4661 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001311725.1 5404143 D 290402 CDS YP_001311726.1 150019472 5295816 5405438..5407042 1 NC_009617.1 PFAM: permease; KEGG: cno:NT01CX_2389 predicted permease superfamily; permease 5407042 5295816 Cbei_4662 Clostridium beijerinckii NCIMB 8052 permease YP_001311726.1 5405438 D 290402 CDS YP_001311727.1 150019473 5295817 5407120..5407908 1 NC_009617.1 PFAM: Protein of unknown function DUF1980; KEGG: ctc:CTC00938 membrane-spanning protein; hypothetical protein 5407908 5295817 Cbei_4663 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311727.1 5407120 D 290402 CDS YP_001311728.1 150019474 5295818 complement(5408110..5409051) 1 NC_009617.1 PFAM: polysaccharide deacetylase; KEGG: cpr:CPR_0810 polysaccharide deacetylase family protein; polysaccharide deacetylase 5409051 5295818 Cbei_4664 Clostridium beijerinckii NCIMB 8052 polysaccharide deacetylase YP_001311728.1 5408110 R 290402 CDS YP_001311729.1 150019475 5295819 complement(5409230..5410711) 1 NC_009617.1 PFAM: glycoside hydrolase, family 25; cell wall binding repeat-containing protein; KEGG: spd:SPD_1965 choline binding protein PcpA; glycoside hydrolase 5410711 5295819 Cbei_4665 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001311729.1 5409230 R 290402 CDS YP_001311730.1 150019476 5295820 complement(5410778..5412100) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; Lytic transglycosylase, catalytic; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; lytic transglycosylase 5412100 5295820 Cbei_4666 Clostridium beijerinckii NCIMB 8052 lytic transglycosylase YP_001311730.1 5410778 R 290402 CDS YP_001311731.1 150019477 5295821 complement(5412241..5414073) 1 NC_009617.1 PFAM: sulfatase; KEGG: cpr:CPR_0570 sulfatase family protein; sulfatase 5414073 5295821 Cbei_4667 Clostridium beijerinckii NCIMB 8052 sulfatase YP_001311731.1 5412241 R 290402 CDS YP_001311732.1 150019478 5295822 complement(5414609..5415514) 1 NC_009617.1 PFAM: periplasmic solute binding protein; KEGG: cpf:CPF_2413 ABC transporter substrate-binding protein; periplasmic solute binding protein 5415514 5295822 Cbei_4668 Clostridium beijerinckii NCIMB 8052 periplasmic solute binding protein YP_001311732.1 5414609 R 290402 CDS YP_001311733.1 150019479 5295823 complement(5415839..5417296) 1 NC_009617.1 PFAM: glycoside hydrolase, family 1; KEGG: cac:CAC1405 beta-glucosidase; glycoside hydrolase 5417296 5295823 Cbei_4669 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001311733.1 5415839 R 290402 CDS YP_001311734.1 150019480 5295824 complement(5417437..5418798) 1 NC_009617.1 PFAM: glycoside hydrolase, family 4; KEGG: efa:EF1411 glycosyl hydrolase, family 4; 6-phospho-beta-glucosidase 5418798 5295824 Cbei_4670 Clostridium beijerinckii NCIMB 8052 6-phospho-beta-glucosidase YP_001311734.1 5417437 R 290402 CDS YP_001311735.1 150019481 5295825 5419371..5420285 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC3026 protein from GDSL (phospholipase B) family of lipolitic enzymes; ABC transporter 5420285 5295825 Cbei_4671 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001311735.1 5419371 D 290402 CDS YP_001311736.1 150019482 5295826 5420299..5421303 1 NC_009617.1 KEGG: cac:CAC3025 conserved membrane protein, possible permease, YHCI B.subtilis ortholog; hypothetical protein 5421303 5295826 Cbei_4672 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311736.1 5420299 D 290402 CDS YP_001311737.1 150019483 5295827 5421320..5422105 1 NC_009617.1 PFAM: lipolytic protein, G-D-S-L family; KEGG: cac:CAC3024 acyl-CoA thioesterase family protein; GDSL family lipase 5422105 5295827 Cbei_4673 Clostridium beijerinckii NCIMB 8052 GDSL family lipase YP_001311737.1 5421320 D 290402 CDS YP_001311738.1 150019484 5295828 complement(5422180..5424309) 1 NC_009617.1 PFAM: glycoside hydrolase, family 3 domain protein; KEGG: pat:Patl_0825 beta-glucosidase; glycoside hydrolase family protein 5424309 5295828 Cbei_4674 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase family protein YP_001311738.1 5422180 R 290402 CDS YP_001311739.1 150019485 5295829 complement(5424367..5425692) 1 NC_009617.1 PFAM: glycoside hydrolase, family 30; KEGG: plu:plu2272 unnamed protein product; similar to glucosylceramidase; glycoside hydrolase 5425692 5295829 Cbei_4675 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001311739.1 5424367 R 290402 CDS YP_001311740.1 150019486 5295830 complement(5425655..5427250) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: cpf:CPF_2344 DNA-binding response regulator, AraC family; response regulator receiver protein 5427250 5295830 Cbei_4676 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001311740.1 5425655 R 290402 CDS YP_001311741.1 150019487 5295831 complement(5427250..5429019) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase internal region; KEGG: tte:TTE2344 predicted ATPase; integral membrane sensor signal transduction histidine kinase 5429019 5295831 Cbei_4677 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001311741.1 5427250 R 290402 CDS YP_001311742.1 150019488 5295832 complement(5429080..5429922) 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_2694 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 5429922 5295832 Cbei_4678 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001311742.1 5429080 R 290402 CDS YP_001311743.1 150019489 5295833 complement(5429928..5430827) 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_2695 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 5430827 5295833 Cbei_4679 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001311743.1 5429928 R 290402 CDS YP_001311744.1 150019490 5295834 complement(5431095..5432408) 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 1; KEGG: dge:Dgeo_2696 extracellular solute-binding protein, family 1; extracellular solute-binding protein 5432408 5295834 Cbei_4680 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001311744.1 5431095 R 290402 CDS YP_001311745.1 150019491 5295835 complement(5432764..5434236) 1 NC_009617.1 KEGG: cac:CAC2610 L-fucose isomerase related protein; L-fucose isomerase-like protein 5434236 5295835 Cbei_4681 Clostridium beijerinckii NCIMB 8052 L-fucose isomerase-like protein YP_001311745.1 5432764 R 290402 CDS YP_001311746.1 150019492 5295836 5434686..5436434 1 NC_009617.1 PFAM: chemotaxis sensory transducer; KEGG: cth:Cthe_0298 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5436434 5295836 Cbei_4682 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001311746.1 5434686 D 290402 CDS YP_001311747.1 150019493 5295837 complement(5436589..5437899) 1 NC_009617.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system, EIIC; KEGG: efa:EF0292 PTS system, IIC component; PTS system lactose/cellobiose family transporter subunit IIC 5437899 5295837 Cbei_4683 Clostridium beijerinckii NCIMB 8052 PTS system lactose/cellobiose family transporter subunit IIC YP_001311747.1 5436589 R 290402 CDS YP_001311748.1 150019494 5295838 complement(5438088..5438396) 1 NC_009617.1 PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: spd:SPD_0233 PTS system, IIB component; phosphotransferase system, lactose/cellobiose-specific IIB subunit 5438396 5295838 Cbei_4684 Clostridium beijerinckii NCIMB 8052 phosphotransferase system, lactose/cellobiose-specific IIB subunit YP_001311748.1 5438088 R 290402 CDS YP_001311749.1 150019495 5295839 complement(5438474..5438797) 1 NC_009617.1 PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: spb:M28_Spy1733 PTS system, cellobiose-specific IIA component; PTS system lactose/cellobiose-specific transporter subunit IIA 5438797 5295839 Cbei_4685 Clostridium beijerinckii NCIMB 8052 PTS system lactose/cellobiose-specific transporter subunit IIA YP_001311749.1 5438474 R 290402 CDS YP_001311750.1 150019496 5295840 complement(5439230..5441917) 1 NC_009617.1 PFAM: sigma-54 factor, interaction domain-containing protein; PTS system fructose subfamily IIA component; PRD domain protein; SMART: ATPase AAA; KEGG: cac:CAC0382 possible transcriptional regulator of levanase operon, AAA-ATPase domain (NtrC family), fused to 2 BglG-like domains, ortholog of B.subtilis LevR; sigma-54 factor interaction domain-containing protein 5441917 5295840 Cbei_4686 Clostridium beijerinckii NCIMB 8052 sigma-54 factor interaction domain-containing protein YP_001311750.1 5439230 R 290402 CDS YP_001311751.1 150019497 5295841 complement(5442188..5444353) 1 NC_009617.1 KEGG: cno:NT01CX_0286 phage infection protein; phage infection protein 5444353 5295841 Cbei_4687 Clostridium beijerinckii NCIMB 8052 phage infection protein YP_001311751.1 5442188 R 290402 CDS YP_001311752.1 150019498 5295842 complement(5444561..5446963) 1 NC_009617.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein; KEGG: chy:CHY_1906 sensory box/GGDEF domain/EAL domain protein; PAS/PAC sensor-containing diguanylate cyclase 5446963 5295842 Cbei_4688 Clostridium beijerinckii NCIMB 8052 PAS/PAC sensor-containing diguanylate cyclase YP_001311752.1 5444561 R 290402 CDS YP_001311753.1 150019499 5295843 complement(5447380..5447646) 1 NC_009617.1 KEGG: dde:Dde_3289 hypothetical protein; hypothetical protein 5447646 5295843 Cbei_4689 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311753.1 5447380 R 290402 CDS YP_001311754.1 150019500 5295844 complement(5447648..5448745) 1 NC_009617.1 KEGG: ctc:CTC01451 membrane spanning protein; membrane spanning protein 5448745 5295844 Cbei_4690 Clostridium beijerinckii NCIMB 8052 membrane spanning protein YP_001311754.1 5447648 R 290402 CDS YP_001311755.1 150019501 5295845 complement(5449160..5450662) 1 NC_009617.1 PFAM: polysaccharide biosynthesis protein; KEGG: cpe:CPE0623 probable capsular polysaccharide synthesis protein; polysaccharide biosynthesis protein 5450662 5295845 Cbei_4691 Clostridium beijerinckii NCIMB 8052 polysaccharide biosynthesis protein YP_001311755.1 5449160 R 290402 CDS YP_001311756.1 150019502 5295846 5451120..5451728 1 NC_009617.1 PFAM: regulatory protein, TetR; KEGG: mst:Msp_0971 hypothetical protein; TetR family transcriptional regulator 5451728 5295846 Cbei_4692 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001311756.1 5451120 D 290402 CDS YP_001311757.1 150019503 5295847 5451735..5452430 1 NC_009617.1 KEGG: mla:Mlab_1736 hypothetical protein; hypothetical protein 5452430 5295847 Cbei_4693 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311757.1 5451735 D 290402 CDS YP_001311758.1 150019504 5295848 complement(5452550..5453245) 1 NC_009617.1 PFAM: Nucleotidyl transferase; KEGG: cpf:CPF_0610 nucleotidyl transferase family protein; nucleotidyl transferase 5453245 5295848 Cbei_4694 Clostridium beijerinckii NCIMB 8052 nucleotidyl transferase YP_001311758.1 5452550 R 290402 CDS YP_001311759.1 150019505 5295849 complement(5453369..5455219) 1 NC_009617.1 PFAM: regulatory protein, MarR; Choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: cpr:CPR_0594 choline/ethanolamine kinase family protein; choline/ethanolamine kinase 5455219 5295849 Cbei_4695 Clostridium beijerinckii NCIMB 8052 choline/ethanolamine kinase YP_001311759.1 5453369 R 290402 CDS YP_001311760.1 150019506 5295850 complement(5455672..5458830) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: cpr:CPR_0597 surface protein PspA precursor; cell wall binding repeat-containing protein 5458830 5295850 Cbei_4696 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311760.1 5455672 R 290402 CDS YP_001311761.1 150019507 5295851 complement(5459263..5459661) 1 NC_009617.1 KEGG: cth:Cthe_2665 Zn-finger containing protein; Zn-finger containing protein 5459661 5295851 Cbei_4697 Clostridium beijerinckii NCIMB 8052 Zn-finger containing protein YP_001311761.1 5459263 R 290402 CDS YP_001311762.1 150019508 5295852 complement(5459953..5461938) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; cell wall hydrolase/autolysin; KEGG: spd:SPD_0126 pneumococcal surface protein A; cell wall hydrolase/autolysin 5461938 5295852 Cbei_4698 Clostridium beijerinckii NCIMB 8052 cell wall hydrolase/autolysin YP_001311762.1 5459953 R 290402 CDS YP_001311763.1 150019509 5295853 complement(5462404..5464674) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; cell wall hydrolase/autolysin; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; cell wall hydrolase/autolysin 5464674 5295853 Cbei_4699 Clostridium beijerinckii NCIMB 8052 cell wall hydrolase/autolysin YP_001311763.1 5462404 R 290402 CDS YP_001311764.1 150019510 5295854 complement(5465006..5465332) 1 NC_009617.1 hypothetical protein 5465332 5295854 Cbei_4700 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311764.1 5465006 R 290402 CDS YP_001311765.1 150019511 5295855 5465512..5466582 1 NC_009617.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cac:CAC3544 membrane associated GGDEF domain containing protein; diguanylate cyclase 5466582 5295855 Cbei_4701 Clostridium beijerinckii NCIMB 8052 diguanylate cyclase YP_001311765.1 5465512 D 290402 CDS YP_001311766.1 150019512 5295856 complement(5466668..5467414) 1 NC_009617.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: cpe:CPE0197 RpiR family transcriptional regulator, glv operon transcriptional regulator; RpiR family transcriptional regulator 5467414 5295856 Cbei_4702 Clostridium beijerinckii NCIMB 8052 RpiR family transcriptional regulator YP_001311766.1 5466668 R 290402 CDS YP_001311767.1 150019513 5295857 complement(5467392..5468183) 1 NC_009617.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: cpe:CPE0197 RpiR family transcriptional regulator, glv operon transcriptional regulator; RpiR family transcriptional regulator 5468183 5295857 Cbei_4703 Clostridium beijerinckii NCIMB 8052 RpiR family transcriptional regulator YP_001311767.1 5467392 R 290402 CDS YP_001311768.1 150019514 5295858 complement(5468437..5469771) 1 NC_009617.1 PFAM: glycoside hydrolase, family 4; KEGG: cac:CAC0533 maltose-6'-phosphate glucosidase (glvA); glycoside hydrolase 5469771 5295858 Cbei_4704 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001311768.1 5468437 R 290402 CDS YP_001311769.1 150019515 5295859 complement(5470293..5471855) 1 NC_009617.1 TIGRFAM: PTS system, alpha-glucoside-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: bsu:BG11848 PTS maltose-specific enzyme IICB component; PTS system alpha-glucoside-specific transporter subunit IIBC 5471855 5295859 Cbei_4705 Clostridium beijerinckii NCIMB 8052 PTS system alpha-glucoside-specific transporter subunit IIBC YP_001311769.1 5470293 R 290402 CDS YP_001311770.1 150019516 5295860 5472286..5472762 1 NC_009617.1 TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease, EIIA 1 domain; KEGG: cpr:CPR_0092 pts system, glucose-specific IIA component; PTS system glucose subfamily transporter subunit IIA 5472762 5295860 Cbei_4706 Clostridium beijerinckii NCIMB 8052 PTS system glucose subfamily transporter subunit IIA YP_001311770.1 5472286 D 290402 CDS YP_001311771.1 150019517 5295861 complement(5473225..5475012) 1 NC_009617.1 PFAM: glycosyl transferase, family 2; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cac:CAC3308 glycosyltransferase fused to TPR-repeat domain; glycosyl transferase family protein 5475012 5295861 Cbei_4707 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001311771.1 5473225 R 290402 CDS YP_001311772.1 150019518 5295862 complement(5475068..5476384) 1 NC_009617.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase-like; KEGG: cac:CAC3310 predicted UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase 5476384 5295862 Cbei_4708 Clostridium beijerinckii NCIMB 8052 UDP-glucose 6-dehydrogenase YP_001311772.1 5475068 R 290402 CDS YP_001311773.1 150019519 5295863 complement(5476717..5477607) 1 NC_009617.1 KEGG: eli:ELI_13285 UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase; UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase 5477607 5295863 Cbei_4709 Clostridium beijerinckii NCIMB 8052 UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase YP_001311773.1 5476717 R 290402 CDS YP_001311774.1 150019520 5295864 complement(5477626..5478663) 1 NC_009617.1 KEGG: swo:Swol_0714 hypothetical protein; hypothetical protein 5478663 5295864 Cbei_4710 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311774.1 5477626 R 290402 CDS YP_001311775.1 150019521 5295865 complement(5478656..5479759) 1 NC_009617.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mja:MJ1066 spore coat polysaccharide biosynthesis protein C (SpsC); glutamine--scyllo-inositol transaminase 5479759 5295865 Cbei_4711 Clostridium beijerinckii NCIMB 8052 glutamine--scyllo-inositol transaminase YP_001311775.1 5478656 R 290402 CDS YP_001311776.1 150019522 5295866 complement(5479752..5480714) 1 NC_009617.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: pcr:Pcryo_0617 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 5480714 5295866 Cbei_4712 Clostridium beijerinckii NCIMB 8052 NAD-dependent epimerase/dehydratase YP_001311776.1 5479752 R 290402 CDS YP_001311777.1 150019523 5295867 complement(5480711..5483221) 1 NC_009617.1 PFAM: glycosyl transferase, group 1; KEGG: cac:CAC3311 TPR-repeat domain fused to glycosyltransferase; group 1 glycosyl transferase 5483221 5295867 Cbei_4713 Clostridium beijerinckii NCIMB 8052 group 1 glycosyl transferase YP_001311777.1 5480711 R 290402 CDS YP_001311778.1 150019524 5295868 5483586..5483870 1 NC_009617.1 hypothetical protein 5483870 5295868 Cbei_4714 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311778.1 5483586 D 290402 CDS YP_001311779.1 150019525 5295869 5484284..5485243 1 NC_009617.1 KEGG: cac:CAC2776 hypothetical protein; hypothetical protein 5485243 5295869 Cbei_4715 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311779.1 5484284 D 290402 CDS YP_001311780.1 150019526 5295870 complement(5485395..5486990) 1 NC_009617.1 TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: cpr:CPR_0581 peptide chain release factor 3; peptide chain release factor 3 5486990 5295870 Cbei_4716 Clostridium beijerinckii NCIMB 8052 peptide chain release factor 3 YP_001311780.1 5485395 R 290402 CDS YP_001311781.1 150019527 5295871 5487519..5489402 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_0126 pneumococcal surface protein A; cell wall binding repeat-containing protein 5489402 5295871 Cbei_4717 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311781.1 5487519 D 290402 CDS YP_001311782.1 150019528 5295872 5489933..5491723 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; cell wall binding repeat-containing protein 5491723 5295872 Cbei_4718 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311782.1 5489933 D 290402 CDS YP_001311783.1 150019529 5295873 5492039..5493988 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_2017 choline binding protein A; cell wall binding repeat-containing protein 5493988 5295873 Cbei_4719 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311783.1 5492039 D 290402 CDS YP_001311784.1 150019530 5295874 complement(5494262..5495134) 1 NC_009617.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cac:CAC0430 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 5495134 5295874 Cbei_4720 Clostridium beijerinckii NCIMB 8052 glycerophosphoryl diester phosphodiesterase YP_001311784.1 5494262 R 290402 CDS YP_001311785.1 150019531 5295875 complement(5495426..5496493) 1 NC_009617.1 TIGRFAM: cell wall/surface repeat protein; PFAM: cell wall binding repeat-containing protein; SMART: Ig domain protein, group 2 domain protein; KEGG: spd:SPD_0126 pneumococcal surface protein A; cell wall/surface repeat-containing protein 5496493 5295875 Cbei_4721 Clostridium beijerinckii NCIMB 8052 cell wall/surface repeat-containing protein YP_001311785.1 5495426 R 290402 CDS YP_001311786.1 150019532 5295876 complement(5496585..5499902) 1 NC_009617.1 TIGRFAM: cell wall/surface repeat protein; PFAM: PKD domain containing protein; cell wall binding repeat-containing protein; Ig domain protein, group 2 domain protein; KEGG: cth:Cthe_0056 Ig-like, group 2; cell wall/surface repeat-containing protein 5499902 5295876 Cbei_4722 Clostridium beijerinckii NCIMB 8052 cell wall/surface repeat-containing protein YP_001311786.1 5496585 R 290402 CDS YP_001311787.1 150019533 5295877 complement(5500218..5502320) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; cell wall binding repeat-containing protein 5502320 5295877 Cbei_4723 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311787.1 5500218 R 290402 CDS YP_001311788.1 150019534 5295878 complement(5502593..5503900) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC1387 membrane associated chemotaxis sensory transducer protein (MSP domain and HamP domain); methyl-accepting chemotaxis sensory transducer 5503900 5295878 Cbei_4724 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001311788.1 5502593 R 290402 CDS YP_001311789.1 150019535 5295879 complement(5504170..5506404) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; cell wall binding repeat-containing protein 5506404 5295879 Cbei_4725 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311789.1 5504170 R 290402 CDS YP_001311790.1 150019536 5295880 complement(5506727..5508148) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_2017 choline binding protein A; cell wall binding repeat-containing protein 5508148 5295880 Cbei_4726 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311790.1 5506727 R 290402 CDS YP_001311791.1 150019537 5295881 complement(5508581..5510362) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; cell wall binding repeat-containing protein 5510362 5295881 Cbei_4727 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311791.1 5508581 R 290402 CDS YP_001311792.1 150019538 5295882 complement(5511391..5513358) 1 NC_009617.1 PFAM: ABC transporter; protein of unknown function DUF214; SMART: ATPase AAA; KEGG: lsl:LSL_0210 ABC transporter ATP-binding protein; ABC transporter 5513358 5295882 Cbei_4728 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001311792.1 5511391 R 290402 CDS YP_001311793.1 150019539 5295883 complement(5513399..5514829) 1 NC_009617.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: bth:BT_1177 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 5514829 5295883 Cbei_4729 Clostridium beijerinckii NCIMB 8052 polysaccharide biosynthesis protein YP_001311793.1 5513399 R 290402 CDS YP_001311794.1 150019540 5295884 complement(5514864..5516045) 1 NC_009617.1 PFAM: glycosyl transferase, group 1; KEGG: lsl:LSL_0990 glycosyltransferase; group 1 glycosyl transferase 5516045 5295884 Cbei_4730 Clostridium beijerinckii NCIMB 8052 group 1 glycosyl transferase YP_001311794.1 5514864 R 290402 CDS YP_001311795.1 150019541 5295885 complement(5516186..5517154) 1 NC_009617.1 PFAM: glycosyl transferase, family 2; KEGG: cpe:CPE0481 beta-1,4-galactosyltransferase; glycosyl transferase family protein 5517154 5295885 Cbei_4731 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001311795.1 5516186 R 290402 CDS YP_001311796.1 150019542 5295886 complement(5517196..5518356) 1 NC_009617.1 PFAM: glycosyl transferase, group 1; KEGG: cpf:CPF_0914 capsular polysaccharide biosynthesis protein; group 1 glycosyl transferase 5518356 5295886 Cbei_4732 Clostridium beijerinckii NCIMB 8052 group 1 glycosyl transferase YP_001311796.1 5517196 R 290402 CDS YP_001311797.1 150019543 5295887 complement(5518491..5519720) 1 NC_009617.1 KEGG: cpe:CPE1986 two-component sensor histidine kinase; hypothetical protein 5519720 5295887 Cbei_4733 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311797.1 5518491 R 290402 CDS YP_001311798.1 150019544 5295888 complement(5520022..5520576) 1 NC_009617.1 KEGG: lil:LA1622 galactoside O-acetyltransferase; galactoside O-acetyltransferase 5520576 5295888 Cbei_4734 Clostridium beijerinckii NCIMB 8052 galactoside O-acetyltransferase YP_001311798.1 5520022 R 290402 CDS YP_001311799.1 150019545 5295889 complement(5520805..5521893) 1 NC_009617.1 PFAM: glycosyl transferase, group 1; KEGG: tte:TTE0949 predicted glycosyltransferase; group 1 glycosyl transferase 5521893 5295889 Cbei_4735 Clostridium beijerinckii NCIMB 8052 group 1 glycosyl transferase YP_001311799.1 5520805 R 290402 CDS YP_001311800.1 150019546 5295890 complement(5521924..5522412) 1 NC_009617.1 PFAM: Glycosyltransferase 28, C-terminal domain; KEGG: lbu:LBUL_1854 glycosyltransferase, family 28; glycosyltransferase family 28 protein 5522412 5295890 Cbei_4736 Clostridium beijerinckii NCIMB 8052 glycosyltransferase family 28 protein YP_001311800.1 5521924 R 290402 CDS YP_001311801.1 150019547 5295891 complement(5522409..5522858) 1 NC_009617.1 PFAM: Oligosaccharide biosynthesis protein Alg14 like; KEGG: stl:stu1105 exopolysaccharide biosynthesis protein, glycosyltransferase; oligosaccharide biosynthesis protein Alg14-like protein 5522858 5295891 Cbei_4737 Clostridium beijerinckii NCIMB 8052 oligosaccharide biosynthesis protein Alg14-like protein YP_001311801.1 5522409 R 290402 CDS YP_001311802.1 150019548 5295892 complement(5522975..5524324) 1 NC_009617.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase-like; KEGG: cpe:CPE0494 UDPglucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase 5524324 5295892 Cbei_4738 Clostridium beijerinckii NCIMB 8052 UDP-glucose 6-dehydrogenase YP_001311802.1 5522975 R 290402 CDS YP_001311803.1 150019549 5295893 complement(5524482..5525144) 1 NC_009617.1 PFAM: sugar transferase; KEGG: cpr:CPR_0454 glycosyltransferase; undecaprenyl-phosphate galactose phosphotransferase 5525144 5295893 Cbei_4739 Clostridium beijerinckii NCIMB 8052 undecaprenyl-phosphate galactose phosphotransferase YP_001311803.1 5524482 R 290402 CDS YP_001311804.1 150019550 5295894 complement(5525489..5526271) 1 NC_009617.1 PFAM: PHP C-terminal domain protein; KEGG: cpf:CPF_0243 capsular polysaccharide biosynthesis protein; protein-tyrosine-phosphatase 5526271 5295894 Cbei_4740 Clostridium beijerinckii NCIMB 8052 protein-tyrosine-phosphatase YP_001311804.1 5525489 R 290402 CDS YP_001311805.1 150019551 5295895 complement(5526396..5527118) 1 NC_009617.1 TIGRFAM: capsular exopolysaccharide family; KEGG: cpf:CPF_0465 capsular polysaccharide biosynthesis protein; exopolysaccharide tyrosine-protein kinase 5527118 5295895 Cbei_4741 Clostridium beijerinckii NCIMB 8052 exopolysaccharide tyrosine-protein kinase YP_001311805.1 5526396 R 290402 CDS YP_001311806.1 150019552 5295896 complement(5527399..5528091) 1 NC_009617.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: cpe:CPE0491 capsular polysaccharide biosynthsis protein; lipopolysaccharide biosynthesis protein 5528091 5295896 Cbei_4742 Clostridium beijerinckii NCIMB 8052 lipopolysaccharide biosynthesis protein YP_001311806.1 5527399 R 290402 CDS YP_001311807.1 150019553 5295897 complement(5528312..5529403) 1 NC_009617.1 PFAM: protein of unknown function UPF0118; KEGG: cac:CAC2432 predicted permease; hypothetical protein 5529403 5295897 Cbei_4743 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311807.1 5528312 R 290402 CDS YP_001311808.1 150019554 5295898 5529669..5530673 1 NC_009617.1 PFAM: NLP/P60 protein; KEGG: cac:CAC0309 cell wall-associated hydrolase; NLP/P60 protein 5530673 5295898 Cbei_4744 Clostridium beijerinckii NCIMB 8052 NLP/P60 protein YP_001311808.1 5529669 D 290402 CDS YP_001311809.1 150019555 5295899 5530920..5532053 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_2028 choline binding protein D; cell wall binding repeat-containing protein 5532053 5295899 Cbei_4745 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311809.1 5530920 D 290402 CDS YP_001311810.1 150019556 5296439 complement(5532679..5536767) 1 NC_009617.1 PFAM: glycosyl transferase, family 2; KEGG: efa:EF2180 glycosyl transferase, group 2 family protein; glycosyl transferase family protein 5536767 5296439 Cbei_4747 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001311810.1 5532679 R 290402 CDS YP_001311811.1 150019557 5295901 complement(5536833..5538281) 1 NC_009617.1 KEGG: hsa:729900 similar to Golgin subfamily A member 2 (Cis-Golgi matrix protein GM130); hypothetical protein 5538281 5295901 Cbei_4748 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311811.1 5536833 R 290402 CDS YP_001311812.1 150019558 5295902 complement(5538285..5539211) 1 NC_009617.1 PFAM: Methyltransferase type 12; KEGG: ppd:Ppro_2106 methyltransferase type 12; type 12 methyltransferase 5539211 5295902 Cbei_4749 Clostridium beijerinckii NCIMB 8052 type 12 methyltransferase YP_001311812.1 5538285 R 290402 CDS YP_001311813.1 150019559 5295903 complement(5539230..5540492) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: hch:HCH_02231 ABC-type polysaccharide/polyol phosphate transport system, ATPase component; ABC transporter 5540492 5295903 Cbei_4750 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001311813.1 5539230 R 290402 CDS YP_001311814.1 150019560 5295904 complement(5540505..5541881) 1 NC_009617.1 PFAM: ABC transporter; KEGG: efa:EF2183 ABC transporter permease; ABC transporter 5541881 5295904 Cbei_4751 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001311814.1 5540505 R 290402 CDS YP_001311815.1 150019561 5295905 complement(5541897..5542736) 1 NC_009617.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: ljo:LJ1052 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 5542736 5295905 Cbei_4752 Clostridium beijerinckii NCIMB 8052 dTDP-4-dehydrorhamnose reductase YP_001311815.1 5541897 R 290402 CDS YP_001311816.1 150019562 5295906 complement(5542751..5543719) 1 NC_009617.1 PFAM: glycosyl transferase, family 2; KEGG: bcl:ABC3693 glycosyltransferase; glycosyl transferase family protein 5543719 5295906 Cbei_4753 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001311816.1 5542751 R 290402 CDS YP_001311817.1 150019563 5295907 complement(5543706..5544725) 1 NC_009617.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: lga:LGAS_1136 dTDP-D-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 5544725 5295907 Cbei_4754 Clostridium beijerinckii NCIMB 8052 dTDP-glucose 4,6-dehydratase YP_001311817.1 5543706 R 290402 CDS YP_001311818.1 150019564 5295908 complement(5544891..5545442) 1 NC_009617.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; KEGG: efa:EF2193 dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase 5545442 5295908 Cbei_4755 Clostridium beijerinckii NCIMB 8052 dTDP-4-dehydrorhamnose 3,5-epimerase YP_001311818.1 5544891 R 290402 CDS YP_001311819.1 150019565 5295909 complement(5545477..5546367) 1 NC_009617.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: lga:LGAS_1135 dTDP-glucose pyrophosphorylase; glucose-1-phosphate thymidylyltransferase 5546367 5295909 Cbei_4756 Clostridium beijerinckii NCIMB 8052 glucose-1-phosphate thymidylyltransferase YP_001311819.1 5545477 R 290402 CDS YP_001311820.1 150019566 5295910 5546786..5548204 1 NC_009617.1 PFAM: sugar transferase; KEGG: dsy:DSY3322 hypothetical protein; undecaprenyl-phosphate galactose phosphotransferase 5548204 5295910 Cbei_4757 Clostridium beijerinckii NCIMB 8052 undecaprenyl-phosphate galactose phosphotransferase YP_001311820.1 5546786 D 290402 CDS YP_001311821.1 150019567 5295911 5548280..5549149 1 NC_009617.1 PFAM: glycosyl transferase, family 2; KEGG: mst:Msp_0207 predicted glycosyltransferase; glycosyl transferase family protein 5549149 5295911 Cbei_4758 Clostridium beijerinckii NCIMB 8052 glycosyl transferase family protein YP_001311821.1 5548280 D 290402 CDS YP_001311822.1 150019568 5295912 5549358..5551190 1 NC_009617.1 PFAM: O-antigen polymerase; KEGG: dsy:DSY3328 hypothetical protein; O-antigen polymerase 5551190 5295912 Cbei_4759 Clostridium beijerinckii NCIMB 8052 O-antigen polymerase YP_001311822.1 5549358 D 290402 CDS YP_001311823.1 150019569 5295913 complement(5552462..5554234) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_1965 choline binding protein PcpA; cell wall binding repeat-containing protein 5554234 5295913 Cbei_4760 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311823.1 5552462 R 290402 CDS YP_001311824.1 150019570 5295914 complement(5555079..5556296) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_2017 choline binding protein A; cell wall binding repeat-containing protein 5556296 5295914 Cbei_4761 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311824.1 5555079 R 290402 CDS YP_001311825.1 150019571 5295915 complement(5556427..5557671) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_2017 choline binding protein A; cell wall binding repeat-containing protein 5557671 5295915 Cbei_4762 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311825.1 5556427 R 290402 CDS YP_001311826.1 150019572 5295916 complement(5557722..5559263) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_2017 choline binding protein A; cell wall binding repeat-containing protein 5559263 5295916 Cbei_4763 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311826.1 5557722 R 290402 CDS YP_001311827.1 150019573 5295917 complement(5559494..5560759) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: spn:SP_2190 choline binding protein A; cell wall binding repeat-containing protein 5560759 5295917 Cbei_4764 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311827.1 5559494 R 290402 CDS YP_001311828.1 150019574 5295918 complement(5560924..5562225) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; cell wall binding repeat-containing protein 5562225 5295918 Cbei_4765 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311828.1 5560924 R 290402 CDS YP_001311829.1 150019575 5295919 complement(5562693..5564420) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_1965 choline binding protein PcpA; cell wall binding repeat-containing protein 5564420 5295919 Cbei_4766 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001311829.1 5562693 R 290402 CDS YP_001311830.1 150019576 5295920 5564654..5564911 1 NC_009617.1 hypothetical protein 5564911 5295920 Cbei_4767 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311830.1 5564654 D 290402 CDS YP_001311831.1 150019577 5295921 5564932..5565153 1 NC_009617.1 hypothetical protein 5565153 5295921 Cbei_4768 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311831.1 5564932 D 290402 CDS YP_001311832.1 150019578 5295922 5565252..5565503 1 NC_009617.1 hypothetical protein 5565503 5295922 Cbei_4769 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311832.1 5565252 D 290402 CDS YP_001311833.1 150019579 5295923 5566019..5566285 1 NC_009617.1 hypothetical protein 5566285 5295923 Cbei_4770 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311833.1 5566019 D 290402 CDS YP_001311834.1 150019580 5295924 complement(5566485..5567345) 1 NC_009617.1 PFAM: protein of unknown function DUF161; KEGG: cpe:CPE2365 hypothetical protein; hypothetical protein 5567345 5295924 Cbei_4771 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311834.1 5566485 R 290402 CDS YP_001311835.1 150019581 5295925 complement(5567563..5569680) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC00888 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 5569680 5295925 Cbei_4772 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001311835.1 5567563 R 290402 CDS YP_001311836.1 150019582 5295926 complement(5570529..5579774) 1 NC_009617.1 PFAM: carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: ctc:CTC02455 cyclic beta 1-2 glucan synthetase; glycosyltransferase 5579774 5295926 Cbei_4773 Clostridium beijerinckii NCIMB 8052 glycosyltransferase YP_001311836.1 5570529 R 290402 CDS YP_001311837.1 150019583 5295927 complement(5580200..5581534) 1 NC_009617.1 catalyzes the removal of amino acids from the N termini of peptides; aminopeptidase 2 5581534 5295927 Cbei_4774 Clostridium beijerinckii NCIMB 8052 aminopeptidase 2 YP_001311837.1 5580200 R 290402 CDS YP_001311838.1 150019584 5295928 complement(5581635..5582699) 1 NC_009617.1 TIGRFAM: phage replisome organizer, KEGG: lmo:lmo2317 similar to protein gp49; phage replisome organizer 5582699 5295928 Cbei_4775 Clostridium beijerinckii NCIMB 8052 phage replisome organizer YP_001311838.1 5581635 R 290402 CDS YP_001311839.1 150019585 5295929 complement(5583394..5584278) 1 NC_009617.1 TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: cpf:CPF_2161 dihydrodipicolinate synthase; dihydrodipicolinate synthase 5584278 5295929 Cbei_4776 Clostridium beijerinckii NCIMB 8052 dihydrodipicolinate synthase YP_001311839.1 5583394 R 290402 CDS YP_001311840.1 150019586 5295930 5584485..5585660 1 NC_009617.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: cpf:CPF_0586 cation efflux family protein; cation diffusion facilitator family transporter 5585660 5295930 Cbei_4777 Clostridium beijerinckii NCIMB 8052 cation diffusion facilitator family transporter YP_001311840.1 5584485 D 290402 CDS YP_001311841.1 150019587 5295931 5585917..5586723 1 NC_009617.1 KEGG: bch:Bcen2424_0018 hypothetical protein; hypothetical protein 5586723 5295931 Cbei_4778 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311841.1 5585917 D 290402 CDS YP_001311842.1 150019588 5295932 complement(5587138..5587860) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_0583 amino acid ABC transporter ATP-binding protein; ABC transporter 5587860 5295932 Cbei_4779 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001311842.1 5587138 R 290402 CDS YP_001311843.1 150019589 5295933 complement(5587847..5588506) 1 NC_009617.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sha:SH1104 hypothetical protein; polar amino acid ABC transporter inner membrane subunit 5588506 5295933 Cbei_4780 Clostridium beijerinckii NCIMB 8052 polar amino acid ABC transporter inner membrane subunit YP_001311843.1 5587847 R 290402 CDS YP_001311844.1 150019590 5295934 complement(5589267..5590103) 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 3; KEGG: cpe:CPE0600 probable amino acid ABC transporter; extracellular solute-binding protein 5590103 5295934 Cbei_4781 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001311844.1 5589267 R 290402 CDS YP_001311845.1 150019591 5295935 complement(5590654..5592828) 1 NC_009617.1 KEGG: cpr:CPR_0566 helicase; helicase 5592828 5295935 Cbei_4782 Clostridium beijerinckii NCIMB 8052 helicase YP_001311845.1 5590654 R 290402 CDS YP_001311846.1 150019592 5295936 complement(5593186..5595318) 1 NC_009617.1 KEGG: cpr:CPR_0565 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; ATP-dependent metalloprotease FtsH 5595318 5295936 Cbei_4783 Clostridium beijerinckii NCIMB 8052 ATP-dependent metalloprotease FtsH YP_001311846.1 5593186 R 290402 CDS YP_001311847.1 150019593 5295937 complement(5595528..5595752) 1 NC_009617.1 KEGG: cpf:CPF_0577 hypothetical protein; hypothetical protein 5595752 5295937 Cbei_4784 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311847.1 5595528 R 290402 CDS YP_001311848.1 150019594 5295938 complement(5595960..5596502) 1 NC_009617.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; KEGG: cpr:CPR_0564 signal peptidase I; signal peptidase I 5596502 5295938 Cbei_4785 Clostridium beijerinckii NCIMB 8052 signal peptidase I YP_001311848.1 5595960 R 290402 CDS YP_001311849.1 150019595 5295939 complement(5596710..5597294) 1 NC_009617.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; KEGG: cpr:CPR_0564 signal peptidase I; signal peptidase I 5597294 5295939 Cbei_4786 Clostridium beijerinckii NCIMB 8052 signal peptidase I YP_001311849.1 5596710 R 290402 CDS YP_001311850.1 150019596 5295940 complement(5597636..5598931) 1 NC_009617.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: cpf:CPF_0576 diaminopimelate decarboxylase; diaminopimelate decarboxylase 5598931 5295940 Cbei_4787 Clostridium beijerinckii NCIMB 8052 diaminopimelate decarboxylase YP_001311850.1 5597636 R 290402 CDS YP_001311851.1 150019597 5295941 complement(5599596..5600270) 1 NC_009617.1 KEGG: cac:CAC0148 predicted enzyme with TIM-barrel fold; hypothetical protein 5600270 5295941 Cbei_4788 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311851.1 5599596 R 290402 CDS YP_001311852.1 150019598 5295942 5601118..5602113 1 NC_009617.1 KEGG: rno:686576 hypothetical protein LOC686576; hypothetical protein 5602113 5295942 Cbei_4789 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311852.1 5601118 D 290402 CDS YP_001311853.1 150019599 5295943 5602110..5603036 1 NC_009617.1 KEGG: lwe:lwe0571 secreted protein; hypothetical protein 5603036 5295943 Cbei_4790 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311853.1 5602110 D 290402 CDS YP_001311854.1 150019600 5295944 complement(5603097..5604359) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cno:NT01CX_0316 membrane assosiated methyl-accepting chemotaxis protein with HAMP domain; methyl-accepting chemotaxis sensory transducer 5604359 5295944 Cbei_4791 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001311854.1 5603097 R 290402 CDS YP_001311855.1 150019601 5295945 5604859..5605395 1 NC_009617.1 KEGG: bha:BH2521 transposase (21); transposase (21) 5605395 5295945 Cbei_4792 Clostridium beijerinckii NCIMB 8052 transposase (21) YP_001311855.1 5604859 D 290402 CDS YP_001311856.1 150019602 5295946 5605415..5605921 1 NC_009617.1 KEGG: bha:BH2520 transposase related protein (20); transposase-like protein (20) 5605921 5295946 Cbei_4793 Clostridium beijerinckii NCIMB 8052 transposase-like protein (20) YP_001311856.1 5605415 D 290402 CDS YP_001311857.1 150019603 5295947 5606230..5607420 1 NC_009617.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 5607420 5295947 Cbei_4794 Clostridium beijerinckii NCIMB 8052 aspartate aminotransferase YP_001311857.1 5606230 D 290402 CDS YP_001311858.1 150019604 5295948 complement(5607516..5608040) 1 NC_009617.1 KEGG: cpf:CPF_1398 hypothetical protein; hypothetical protein 5608040 5295948 Cbei_4795 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311858.1 5607516 R 290402 CDS YP_001311859.1 150019605 5295949 5608340..5609551 1 NC_009617.1 PFAM: phosphoesterase, DHHA1; Threonyl/alanyl tRNA synthetase, SAD; KEGG: cpf:CPF_0714 DHHA1 domain protein; threonyl/alanyl tRNA synthetase 5609551 5295949 Cbei_4796 Clostridium beijerinckii NCIMB 8052 threonyl/alanyl tRNA synthetase YP_001311859.1 5608340 D 290402 CDS YP_001311860.1 150019606 5295950 complement(5610012..5610743) 1 NC_009617.1 PFAM: GntR family transcriptional regulator; UbiC transcription regulator-associated domain protein; KEGG: cac:CAC3502 transcriptional regulator, fadR family; GntR family transcriptional regulator 5610743 5295950 Cbei_4797 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001311860.1 5610012 R 290402 CDS YP_001311861.1 150019607 5295951 complement(5610922..5611764) 1 NC_009617.1 PFAM: PfkB domain protein; KEGG: stm:STM3600 sugar kinase; ribokinase-like domain-containing protein 5611764 5295951 Cbei_4798 Clostridium beijerinckii NCIMB 8052 ribokinase-like domain-containing protein YP_001311861.1 5610922 R 290402 CDS YP_001311862.1 150019608 5295952 complement(5611791..5612759) 1 NC_009617.1 PFAM: sugar isomerase (SIS); KEGG: cac:CAC3501 predicted phosphosugar isomerase; sugar isomerase (SIS) 5612759 5295952 Cbei_4799 Clostridium beijerinckii NCIMB 8052 sugar isomerase (SIS) YP_001311862.1 5611791 R 290402 CDS YP_001311863.1 150019609 5295953 complement(5613259..5614092) 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; KEGG: cpr:CPR_0567 amino acid ABC transporter; extracellular solute-binding protein 5614092 5295953 Cbei_4800 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001311863.1 5613259 R 290402 CDS YP_001311864.1 150019610 5295954 complement(5614417..5614623) 1 NC_009617.1 PFAM: Heavy metal transport/detoxification protein; KEGG: dsy:DSY4509 hypothetical protein; heavy metal transport/detoxification protein 5614623 5295954 Cbei_4801 Clostridium beijerinckii NCIMB 8052 heavy metal transport/detoxification protein YP_001311864.1 5614417 R 290402 CDS YP_001311865.1 150019611 5295955 complement(5614773..5617202) 1 NC_009617.1 TIGRFAM: ATPase P; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: dsy:DSY4510 hypothetical protein; heavy metal translocating P-type ATPase 5617202 5295955 Cbei_4802 Clostridium beijerinckii NCIMB 8052 heavy metal translocating P-type ATPase YP_001311865.1 5614773 R 290402 CDS YP_001311866.1 150019612 5295956 complement(5617356..5617622) 1 NC_009617.1 PFAM: protein of unknown function DUF156; KEGG: cpr:CPR_0193 hypothetical protein; hypothetical protein 5617622 5295956 Cbei_4803 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311866.1 5617356 R 290402 CDS YP_001311867.1 150019613 5295957 complement(5617891..5618376) 1 NC_009617.1 TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease, EIIA 1 domain; KEGG: bsu:BG11450 PTS glucose-specific enzyme IIA component; PTS system glucose subfamily transporter subunit IIA 5618376 5295957 Cbei_4804 Clostridium beijerinckii NCIMB 8052 PTS system glucose subfamily transporter subunit IIA YP_001311867.1 5617891 R 290402 CDS YP_001311868.1 150019614 5295958 complement(5618385..5619713) 1 NC_009617.1 PFAM: glycoside hydrolase, family 4; KEGG: eca:ECA3226 6-phospho-alpha-glucosidase; 6-phospho-beta-glucosidase 5619713 5295958 Cbei_4805 Clostridium beijerinckii NCIMB 8052 6-phospho-beta-glucosidase YP_001311868.1 5618385 R 290402 CDS YP_001311869.1 150019615 5295959 complement(5619735..5621330) 1 NC_009617.1 PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: cac:CAC3425 PTS system, (possibly glucose-specific) IIBC component; phosphotransferase system, EIIC 5621330 5295959 Cbei_4806 Clostridium beijerinckii NCIMB 8052 phosphotransferase system, EIIC YP_001311869.1 5619735 R 290402 CDS YP_001311870.1 150019616 5295960 complement(5621572..5622369) 1 NC_009617.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: efa:EF2259 phosphosugar-binding transcriptional regulator; RpiR family transcriptional regulator 5622369 5295960 Cbei_4807 Clostridium beijerinckii NCIMB 8052 RpiR family transcriptional regulator YP_001311870.1 5621572 R 290402 CDS YP_001311871.1 150019617 5295961 complement(5622483..5624246) 1 NC_009617.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase, HD sub domain; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase, HD region; KEGG: cpf:CPF_1164 sensory box-containing diguanylate cyclase; diguanylate cyclase and metal dependent phosphohydrolase 5624246 5295961 Cbei_4808 Clostridium beijerinckii NCIMB 8052 diguanylate cyclase and metal dependent phosphohydrolase YP_001311871.1 5622483 R 290402 CDS YP_001311872.1 150019618 5295962 complement(5624547..5625734) 1 NC_009617.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: btk:BT9727_3419 N-acyl-L-amino acid amidohydrolase; amidohydrolase 5625734 5295962 Cbei_4809 Clostridium beijerinckii NCIMB 8052 amidohydrolase YP_001311872.1 5624547 R 290402 CDS YP_001311873.1 150019619 5295963 complement(5626032..5627075) 1 NC_009617.1 PFAM: Abortive infection protein; KEGG: ssa:SSA_1079 hypothetical protein; abortive infection protein 5627075 5295963 Cbei_4810 Clostridium beijerinckii NCIMB 8052 abortive infection protein YP_001311873.1 5626032 R 290402 CDS YP_001311874.1 150019620 5295964 complement(5627090..5627860) 1 NC_009617.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: cac:CAC1665 predicted amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 5627860 5295964 Cbei_4811 Clostridium beijerinckii NCIMB 8052 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001311874.1 5627090 R 290402 CDS YP_001311875.1 150019621 5295965 complement(5627982..5628326) 1 NC_009617.1 KEGG: cac:CAC0920 protein related to MifH/DopD protein family, function in bacteria is unknown; related to MifH/DopD protein family; hypothetical protein 5628326 5295965 Cbei_4812 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311875.1 5627982 R 290402 CDS YP_001311876.1 150019622 5295966 5628874..5629263 1 NC_009617.1 PFAM: response regulator receiver; KEGG: ace:Acel_2099 response regulator receiver modulated diguanylate phosphodiesterase; response regulator receiver protein 5629263 5295966 Cbei_4813 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001311876.1 5628874 D 290402 CDS YP_001311877.1 150019623 5295967 5629293..5632232 1 NC_009617.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: sfr:Sfri_1019 PAS/PAC sensor hybrid histidine kinase; multi-sensor hybrid histidine kinase 5632232 5295967 Cbei_4814 Clostridium beijerinckii NCIMB 8052 multi-sensor hybrid histidine kinase YP_001311877.1 5629293 D 290402 CDS YP_001311878.1 150019624 5295968 5632276..5632638 1 NC_009617.1 hypothetical protein 5632638 5295968 Cbei_4815 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311878.1 5632276 D 290402 CDS YP_001311879.1 150019625 5295969 complement(5632765..5633175) 1 NC_009617.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ade:Adeh_0219 hemerythrin-like, metal-binding protein; hemerythrin-like metal-binding protein 5633175 5295969 Cbei_4816 Clostridium beijerinckii NCIMB 8052 hemerythrin-like metal-binding protein YP_001311879.1 5632765 R 290402 CDS YP_001311880.1 150019626 5295970 complement(5633416..5633643) 1 NC_009617.1 hypothetical protein 5633643 5295970 Cbei_4817 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311880.1 5633416 R 290402 CDS YP_001311881.1 150019627 5295971 complement(5633677..5634084) 1 NC_009617.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: gsu:GSU2929 hypothetical protein; hemerythrin-like metal-binding protein 5634084 5295971 Cbei_4818 Clostridium beijerinckii NCIMB 8052 hemerythrin-like metal-binding protein YP_001311881.1 5633677 R 290402 CDS YP_001311882.1 150019628 5295972 complement(5634203..5634610) 1 NC_009617.1 PFAM: response regulator receiver; KEGG: cth:Cthe_0805 response regulator receiver protein; response regulator receiver protein 5634610 5295972 Cbei_4819 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001311882.1 5634203 R 290402 CDS YP_001311883.1 150019629 5295973 complement(5634637..5636109) 1 NC_009617.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: dsy:DSY3378 hypothetical protein; response regulator receiver sensor signal transduction histidine kinase 5636109 5295973 Cbei_4820 Clostridium beijerinckii NCIMB 8052 response regulator receiver sensor signal transduction histidine kinase YP_001311883.1 5634637 R 290402 CDS YP_001311884.1 150019630 5295974 complement(5636151..5637755) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC0120 membrane-associated methyl-accepting chemotaxis protein with HAMP domain; methyl-accepting chemotaxis sensory transducer 5637755 5295974 Cbei_4821 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001311884.1 5636151 R 290402 CDS YP_001311885.1 150019631 5295975 complement(5637771..5638268) 1 NC_009617.1 PFAM: CheW domain protein; KEGG: cth:Cthe_0809 CheW protein; CheW protein 5638268 5295975 Cbei_4822 Clostridium beijerinckii NCIMB 8052 CheW protein YP_001311885.1 5637771 R 290402 CDS YP_001311886.1 150019632 5295976 complement(5638303..5640927) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cth:Cthe_0298 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5640927 5295976 Cbei_4823 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001311886.1 5638303 R 290402 CDS YP_001311887.1 150019633 5295977 complement(5641026..5641397) 1 NC_009617.1 PFAM: response regulator receiver; KEGG: ctc:CTC01729 chemotaxis protein cheY; response regulator receiver protein 5641397 5295977 Cbei_4824 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001311887.1 5641026 R 290402 CDS YP_001311888.1 150019634 5295978 5641840..5642496 1 NC_009617.1 PFAM: LuxR family transcriptional regulator; response regulator receiver; KEGG: cno:NT01CX_1314 response regulator (CheY-like recever domain and HTH); two component LuxR family transcriptional regulator 5642496 5295978 Cbei_4825 Clostridium beijerinckii NCIMB 8052 two component LuxR family transcriptional regulator YP_001311888.1 5641840 D 290402 CDS YP_001311889.1 150019635 5295979 complement(5642508..5643533) 1 NC_009617.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: cth:Cthe_0807 response regulator receiver modulated CheB methylesterase; response regulator receiver modulated CheB methylesterase 5643533 5295979 Cbei_4826 Clostridium beijerinckii NCIMB 8052 response regulator receiver modulated CheB methylesterase YP_001311889.1 5642508 R 290402 CDS YP_001311890.1 150019636 5295980 complement(5643576..5644391) 1 NC_009617.1 PFAM: MCP methyltransferase, CheR-type; KEGG: cth:Cthe_0808 MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase 5644391 5295980 Cbei_4827 Clostridium beijerinckii NCIMB 8052 protein-glutamate O-methyltransferase YP_001311890.1 5643576 R 290402 CDS YP_001311891.1 150019637 5295981 complement(5644407..5646128) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cth:Cthe_0039 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5646128 5295981 Cbei_4828 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001311891.1 5644407 R 290402 CDS YP_001311892.1 150019638 5295982 complement(5646181..5648229) 1 NC_009617.1 PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; P2 response regulator binding domain protein; KEGG: cth:Cthe_0810 chemotaxis protein CheAs; chemotaxis protein CheA 5648229 5295982 Cbei_4829 Clostridium beijerinckii NCIMB 8052 chemotaxis protein CheA YP_001311892.1 5646181 R 290402 CDS YP_001311893.1 150019639 5295983 complement(5648488..5649222) 1 NC_009617.1 PFAM: OmpA/MotB domain protein; KEGG: cac:CAC1845 flagellar motor protein MotB; OmpA/MotB domain-containing protein 5649222 5295983 Cbei_4830 Clostridium beijerinckii NCIMB 8052 OmpA/MotB domain-containing protein YP_001311893.1 5648488 R 290402 CDS YP_001311894.1 150019640 5295984 complement(5649240..5650025) 1 NC_009617.1 With Mot B forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.; flagellar motor protein MotA 5650025 5295984 Cbei_4831 Clostridium beijerinckii NCIMB 8052 flagellar motor protein MotA YP_001311894.1 5649240 R 290402 CDS YP_001311895.1 150019641 5295985 complement(5650601..5652325) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cno:NT01CX_0316 membrane assosiated methyl-accepting chemotaxis protein with HAMP domain; methyl-accepting chemotaxis sensory transducer 5652325 5295985 Cbei_4832 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001311895.1 5650601 R 290402 CDS YP_001311896.1 150019642 5295986 complement(5652616..5654058) 1 NC_009617.1 PFAM: glycoside hydrolase, family 1; KEGG: lwe:lwe0245 glycosyl hydrolase, family 1; glycoside hydrolase 5654058 5295986 Cbei_4833 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001311896.1 5652616 R 290402 CDS YP_001311897.1 150019643 5295987 complement(5654481..5655176) 1 NC_009617.1 PFAM: Rubrerythrin; manganese containing catalase; KEGG: cac:CAC2800 CotJC-like protein (GS80 family); catalase 5655176 5295987 Cbei_4834 Clostridium beijerinckii NCIMB 8052 catalase YP_001311897.1 5654481 R 290402 CDS YP_001311898.1 150019644 5295988 complement(5655499..5656605) 1 NC_009617.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cth:Cthe_1546 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin 5656605 5295988 Cbei_4835 Clostridium beijerinckii NCIMB 8052 4Fe-4S ferredoxin YP_001311898.1 5655499 R 290402 CDS YP_001311899.1 150019645 5295989 5656876..5657595 1 NC_009617.1 PFAM: GntR family transcriptional regulator; UbiC transcription regulator-associated domain protein; KEGG: eca:ECA0190 GntR-family transcriptional regulator; GntR family transcriptional regulator 5657595 5295989 Cbei_4836 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001311899.1 5656876 D 290402 CDS YP_001311900.1 150019646 5295990 complement(5657608..5658807) 1 NC_009617.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA0189 mandelate racemase / muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 5658807 5295990 Cbei_4837 Clostridium beijerinckii NCIMB 8052 mandelate racemase/muconate lactonizing protein YP_001311900.1 5657608 R 290402 CDS YP_001311901.1 150019647 5295991 5659074..5660924 1 NC_009617.1 TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease, EIIA 1 domain; phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: eca:ECA0188 PTS system, IIABC component; PTS system glucose subfamily transporter subunit IIA 5660924 5295991 Cbei_4838 Clostridium beijerinckii NCIMB 8052 PTS system glucose subfamily transporter subunit IIA YP_001311901.1 5659074 D 290402 CDS YP_001311902.1 150019648 5295992 complement(5661064..5661855) 1 NC_009617.1 PFAM: aminoglycoside 3-N-acetyltransferase; KEGG: bcz:BCZK2651 aminoglycoside N3'-acetyltransferase; aminoglycoside N(3')-acetyltransferase 5661855 5295992 Cbei_4839 Clostridium beijerinckii NCIMB 8052 aminoglycoside N(3')-acetyltransferase YP_001311902.1 5661064 R 290402 CDS YP_001311903.1 150019649 5295993 complement(5661880..5662731) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; Cupin 2, conserved barrel domain protein; KEGG: lmo:lmo2164 hypothetical protein; helix-turn-helix domain-containing protein 5662731 5295993 Cbei_4840 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001311903.1 5661880 R 290402 CDS YP_001311904.1 150019650 5295994 complement(5662778..5663827) 1 NC_009617.1 PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: lwe:lwe2175 oxidoreductase, Gfo/Idh/MocA family; oxidoreductase domain-containing protein 5663827 5295994 Cbei_4841 Clostridium beijerinckii NCIMB 8052 oxidoreductase domain-containing protein YP_001311904.1 5662778 R 290402 CDS YP_001311905.1 150019651 5295995 complement(5663859..5664830) 1 NC_009617.1 PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel; KEGG: gka:GK2111 hypothetical protein; xylose isomerase domain-containing protein 5664830 5295995 Cbei_4842 Clostridium beijerinckii NCIMB 8052 xylose isomerase domain-containing protein YP_001311905.1 5663859 R 290402 CDS YP_001311906.1 150019652 5295996 complement(5664865..5665965) 1 NC_009617.1 PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: tte:TTE1951 predicted dehydrogenase and related proteins; oxidoreductase domain-containing protein 5665965 5295996 Cbei_4843 Clostridium beijerinckii NCIMB 8052 oxidoreductase domain-containing protein YP_001311906.1 5664865 R 290402 CDS YP_001311907.1 150019653 5296440 complement(5667304..5668476) 1 NC_009617.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: zmo:ZMO1264 mandelate racemase; mandelate racemase/muconate lactonizing protein 5668476 5296440 Cbei_4845 Clostridium beijerinckii NCIMB 8052 mandelate racemase/muconate lactonizing protein YP_001311907.1 5667304 R 290402 CDS YP_001311908.1 150019654 5295998 complement(5668493..5670328) 1 NC_009617.1 TIGRFAM: PTS system, glucose subfamily, IIA subunit; PTS system, beta-glucoside-specific IIABC subunit; PFAM: sugar-specific permease, EIIA 1 domain; phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: lca:LSEI_1105 beta-glucosides PTS, EIIBCA; PTS system beta-glucoside-specific transporter subunit IIABC 5670328 5295998 Cbei_4846 Clostridium beijerinckii NCIMB 8052 PTS system beta-glucoside-specific transporter subunit IIABC YP_001311908.1 5668493 R 290402 CDS YP_001311909.1 150019655 5295999 complement(5670402..5671790) 1 NC_009617.1 PFAM: glycoside hydrolase, family 4; KEGG: lwe:lwe0496 glycosyl hydrolase, family 4; glycoside hydrolase 5671790 5295999 Cbei_4847 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001311909.1 5670402 R 290402 CDS YP_001311910.1 150019656 5296000 complement(5671986..5672846) 1 NC_009617.1 PFAM: helix-turn-helix protein RpiR; KEGG: lwe:lwe2648 phosphosugar-binding transcriptional regulator, RpiR family; RpiR family transcriptional regulator 5672846 5296000 Cbei_4848 Clostridium beijerinckii NCIMB 8052 RpiR family transcriptional regulator YP_001311910.1 5671986 R 290402 CDS YP_001311911.1 150019657 5296001 5673448..5674506 1 NC_009617.1 KEGG: ppr:PBPRB1872 galactoside ABC transporter periplasmic D-galactose/D-glucose-binding protein; galactoside ABC transporter periplasmic D-galactose/D-glucose-binding protein 5674506 5296001 Cbei_4849 Clostridium beijerinckii NCIMB 8052 galactoside ABC transporter periplasmic D-galactose/D-glucose-binding protein YP_001311911.1 5673448 D 290402 CDS YP_001311912.1 150019658 5296002 complement(5675308..5676687) 1 NC_009617.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; KEGG: cpe:CPE0367 RNA methyltransferase; RNA methyltransferase 5676687 5296002 Cbei_4850 Clostridium beijerinckii NCIMB 8052 RNA methyltransferase YP_001311912.1 5675308 R 290402 CDS YP_001311913.1 150019659 5296003 complement(5677589..5679010) 1 NC_009617.1 TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; KEGG: cpr:CPR_0342 pyruvate kinase; pyruvate kinase 5679010 5296003 Cbei_4851 Clostridium beijerinckii NCIMB 8052 pyruvate kinase YP_001311913.1 5677589 R 290402 CDS YP_001311914.1 150019660 5296004 complement(5679155..5680111) 1 NC_009617.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 5680111 5296004 Cbei_4852 Clostridium beijerinckii NCIMB 8052 6-phosphofructokinase YP_001311914.1 5679155 R 290402 CDS YP_001311915.1 150019661 5296005 complement(5680568..5684143) 1 NC_009617.1 catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria.; DNA polymerase III DnaE 5684143 dnaE 5296005 dnaE Clostridium beijerinckii NCIMB 8052 DNA polymerase III DnaE YP_001311915.1 5680568 R 290402 CDS YP_001311916.1 150019662 5296006 complement(5684247..5684531) 1 NC_009617.1 PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: ppd:Ppro_0287 stress responsive alpha-beta barrel domain protein; stress responsive alpha-beta barrel domain-containing protein 5684531 5296006 Cbei_4854 Clostridium beijerinckii NCIMB 8052 stress responsive alpha-beta barrel domain-containing protein YP_001311916.1 5684247 R 290402 CDS YP_001311917.1 150019663 5296007 complement(5684555..5685502) 1 NC_009617.1 PFAM: protein of unknown function DUF199; KEGG: cpr:CPR_0337 hypothetical protein; hypothetical protein 5685502 5296007 Cbei_4855 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311917.1 5684555 R 290402 CDS YP_001311918.1 150019664 5296008 complement(5685545..5686897) 1 NC_009617.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: ctc:CTC02494 transporter; hypothetical protein 5686897 5296008 Cbei_4856 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311918.1 5685545 R 290402 CDS YP_001311919.1 150019665 5296009 complement(5686894..5687778) 1 NC_009617.1 PFAM: uncharacterised P-loop ATPase protein UPF0042; KEGG: cpr:CPR_0335 ATP-binding protein; hypothetical protein 5687778 5296009 Cbei_4857 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311919.1 5686894 R 290402 CDS YP_001311920.1 150019666 5296010 complement(5688005..5688919) 1 NC_009617.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 5688919 murB 5296010 murB Clostridium beijerinckii NCIMB 8052 UDP-N-acetylenolpyruvoylglucosamine reductase YP_001311920.1 5688005 R 290402 CDS YP_001311921.1 150019667 5296011 complement(5689157..5691022) 1 NC_009617.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 5691022 uvrC 5296011 uvrC Clostridium beijerinckii NCIMB 8052 excinuclease ABC subunit C YP_001311921.1 5689157 R 290402 CDS YP_001311922.1 150019668 5296012 complement(5691166..5692635) 1 NC_009617.1 PFAM: penicillin-binding protein, transpeptidase; KEGG: cac:CAC0506 penicillin-binding protein; peptidoglycan glycosyltransferase 5692635 5296012 Cbei_4860 Clostridium beijerinckii NCIMB 8052 peptidoglycan glycosyltransferase YP_001311922.1 5691166 R 290402 CDS YP_001311923.1 150019669 5296013 complement(5692639..5693859) 1 NC_009617.1 PFAM: cell cycle protein; KEGG: cpr:CPR_0331 cell cycle protein, FtsW/RodA/SpoVE family; cell cycle protein 5693859 5296013 Cbei_4861 Clostridium beijerinckii NCIMB 8052 cell cycle protein YP_001311923.1 5692639 R 290402 CDS YP_001311924.1 150019670 5296014 complement(5694012..5694455) 1 NC_009617.1 PFAM: Forkhead-associated protein; KEGG: cpf:CPF_0338 FHA domain protein; FHA domain-containing protein 5694455 5296014 Cbei_4862 Clostridium beijerinckii NCIMB 8052 FHA domain-containing protein YP_001311924.1 5694012 R 290402 CDS YP_001311925.1 150019671 5296015 complement(5694820..5697645) 1 NC_009617.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 5697645 uvrA 5296015 uvrA Clostridium beijerinckii NCIMB 8052 excinuclease ABC subunit A YP_001311925.1 5694820 R 290402 CDS YP_001311926.1 150019672 5296016 complement(5697722..5699695) 1 NC_009617.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 5699695 5296016 Cbei_4864 Clostridium beijerinckii NCIMB 8052 excinuclease ABC subunit B YP_001311926.1 5697722 R 290402 CDS YP_001311927.1 150019673 5296017 complement(5699972..5701330) 1 NC_009617.1 KEGG: cno:NT01CX_1273 membrane protein containing C-terminal PDZ domain; PDZ domain-containing protein 5701330 5296017 Cbei_4865 Clostridium beijerinckii NCIMB 8052 PDZ domain-containing protein YP_001311927.1 5699972 R 290402 CDS YP_001311928.1 150019674 5296018 complement(5701342..5702604) 1 NC_009617.1 TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: cpe:CPE0301 probable carboxyl-terminal proteinase; carboxyl-terminal protease 5702604 5296018 Cbei_4866 Clostridium beijerinckii NCIMB 8052 carboxyl-terminal protease YP_001311928.1 5701342 R 290402 CDS YP_001311929.1 150019675 5296019 complement(5702766..5703656) 1 NC_009617.1 PFAM: protein of unknown function DUF214; KEGG: cpf:CPF_0297 cell division protein; hypothetical protein 5703656 5296019 Cbei_4867 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311929.1 5702766 R 290402 CDS YP_001311930.1 150019676 5296020 complement(5703646..5704332) 1 NC_009617.1 TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpr:CPR_0291 cell division ATP-binding protein FtsE; cell division ATP-binding protein FtsE 5704332 5296020 Cbei_4868 Clostridium beijerinckii NCIMB 8052 cell division ATP-binding protein FtsE YP_001311930.1 5703646 R 290402 CDS YP_001311931.1 150019677 5296021 complement(5704459..5705313) 1 NC_009617.1 PFAM: protein of unknown function DUF161; KEGG: cac:CAC0496 uncharacterized conserved protein, YitT family; hypothetical protein 5705313 5296021 Cbei_4869 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311931.1 5704459 R 290402 CDS YP_001311932.1 150019678 5296022 complement(5705476..5706420) 1 NC_009617.1 PFAM: Transketolase, central region; Transketolase domain protein; KEGG: cpr:CPR_0288 transketolase; transketolase, central region 5706420 5296022 Cbei_4870 Clostridium beijerinckii NCIMB 8052 transketolase, central region YP_001311932.1 5705476 R 290402 CDS YP_001311933.1 150019679 5296023 complement(5706420..5707241) 1 NC_009617.1 PFAM: Transketolase domain protein; KEGG: cpr:CPR_0287 transketolase; transketolase domain-containing protein 5707241 5296023 Cbei_4871 Clostridium beijerinckii NCIMB 8052 transketolase domain-containing protein YP_001311933.1 5706420 R 290402 CDS YP_001311934.1 150019680 5296024 complement(5707470..5707823) 1 NC_009617.1 PFAM: PemK family protein; KEGG: cpr:CPR_0286 PemK family protein; transcriptional modulator of MazE/toxin MazF 5707823 5296024 Cbei_4872 Clostridium beijerinckii NCIMB 8052 transcriptional modulator of MazE/toxin MazF YP_001311934.1 5707470 R 290402 CDS YP_001311935.1 150019681 5296025 complement(5707833..5708090) 1 NC_009617.1 KEGG: cpf:CPF_0290 hypothetical protein; hypothetical protein 5708090 5296025 Cbei_4873 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311935.1 5707833 R 290402 CDS YP_001311936.1 150019682 5296026 complement(5708317..5708949) 1 NC_009617.1 KEGG: cac:CAC0491 uncharacterized probably secreted protein, homolog of YDCC B.subtilis; hypothetical protein 5708949 5296026 Cbei_4874 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311936.1 5708317 R 290402 CDS YP_001311937.1 150019683 5296027 complement(5709015..5710523) 1 NC_009617.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: hydroxyethylthiazole kinase; protein of unknown function UPF0031; YjeF-family N-terminal domain protein; KEGG: cpr:CPR_0283 carbohydrate kinase family protein; carbohydrate kinase 5710523 5296027 Cbei_4875 Clostridium beijerinckii NCIMB 8052 carbohydrate kinase YP_001311937.1 5709015 R 290402 CDS YP_001311938.1 150019684 5296028 complement(5710523..5710894) 1 NC_009617.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 5710894 acpS 5296028 acpS Clostridium beijerinckii NCIMB 8052 4'-phosphopantetheinyl transferase YP_001311938.1 5710523 R 290402 CDS YP_001311939.1 150019685 5296029 complement(5710967..5711296) 1 NC_009617.1 KEGG: ctc:CTC02517 hypothetical protein; hypothetical protein 5711296 5296029 Cbei_4877 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311939.1 5710967 R 290402 CDS YP_001311940.1 150019686 5296030 complement(5712061..5712402) 1 NC_009617.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cpr:CPR_0274 single-strand binding protein family; single-strand binding protein 5712402 5296030 Cbei_4878 Clostridium beijerinckii NCIMB 8052 single-strand binding protein YP_001311940.1 5712061 R 290402 CDS YP_001311941.1 150019687 5296031 complement(5712502..5713356) 1 NC_009617.1 TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: cpf:CPF_0281 YihY family protein; ribonuclease BN 5713356 5296031 Cbei_4879 Clostridium beijerinckii NCIMB 8052 ribonuclease BN YP_001311941.1 5712502 R 290402 CDS YP_001311942.1 150019688 5296032 complement(5713588..5714904) 1 NC_009617.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase, NAD-binding; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase-like; KEGG: cno:NT01CX_1780 UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase 5714904 5296032 Cbei_4880 Clostridium beijerinckii NCIMB 8052 UDP-glucose 6-dehydrogenase YP_001311942.1 5713588 R 290402 CDS YP_001311943.1 150019689 5296033 complement(5715017..5715592) 1 NC_009617.1 KEGG: swo:Swol_0704 hexapeptide transferase family protein; hexapeptide transferase family protein 5715592 5296033 Cbei_4881 Clostridium beijerinckii NCIMB 8052 hexapeptide transferase family protein YP_001311943.1 5715017 R 290402 CDS YP_001311944.1 150019690 5296034 complement(5715678..5716859) 1 NC_009617.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: swo:Swol_0703 pyridoxal phosphate-dependent enzyme; glutamine--scyllo-inositol transaminase 5716859 5296034 Cbei_4882 Clostridium beijerinckii NCIMB 8052 glutamine--scyllo-inositol transaminase YP_001311944.1 5715678 R 290402 CDS YP_001311945.1 150019691 5296035 complement(5717097..5719382) 1 NC_009617.1 PFAM: DEAD_2 domain protein; SMART: DEXDc2; helicase c2; KEGG: cno:NT01CX_0936 DNA repair helicase, truncation; DEAD/DEAH box helicase 5719382 5296035 Cbei_4883 Clostridium beijerinckii NCIMB 8052 DEAD/DEAH box helicase YP_001311945.1 5717097 R 290402 CDS YP_001311946.1 150019692 5296036 complement(5719539..5720129) 1 NC_009617.1 PFAM: Domain of unknown function DUF1836; KEGG: cpf:CPF_0278 hypothetical protein; hypothetical protein 5720129 5296036 Cbei_4884 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311946.1 5719539 R 290402 CDS YP_001311947.1 150019693 5296037 5720680..5720925 1 NC_009617.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: cpr:CPR_0268 transcriptional regulator, AbrB family; AbrB family transcriptional regulator 5720925 5296037 Cbei_4885 Clostridium beijerinckii NCIMB 8052 AbrB family transcriptional regulator YP_001311947.1 5720680 D 290402 CDS YP_001311948.1 150019694 5296038 complement(5721029..5721874) 1 NC_009617.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: cno:NT01CX_0752 tetrapyrrole (corrin/porphyrin) methylase; uroporphyrin-III C/tetrapyrrole methyltransferase 5721874 5296038 Cbei_4886 Clostridium beijerinckii NCIMB 8052 uroporphyrin-III C/tetrapyrrole methyltransferase YP_001311948.1 5721029 R 290402 CDS YP_001311949.1 150019695 5296039 complement(5721876..5722625) 1 NC_009617.1 PFAM: methyltransferase small; KEGG: cpe:CPE0279 hypothetical protein; methyltransferase small 5722625 5296039 Cbei_4887 Clostridium beijerinckii NCIMB 8052 methyltransferase small YP_001311949.1 5721876 R 290402 CDS YP_001311950.1 150019696 5296040 complement(5722817..5724055) 1 NC_009617.1 PFAM: NLP/P60 protein; KEGG: cpf:CPF_0274 SagA protein; NLP/P60 protein 5724055 5296040 Cbei_4888 Clostridium beijerinckii NCIMB 8052 NLP/P60 protein YP_001311950.1 5722817 R 290402 CDS YP_001311951.1 150019697 5296441 5724709..5725353 1 NC_009617.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cac:CAC3231 predicted phosphatase, HAD superfamily; HAD family hydrolase 5725353 5296441 Cbei_4889 Clostridium beijerinckii NCIMB 8052 HAD family hydrolase YP_001311951.1 5724709 D 290402 CDS YP_001311952.1 150019698 5296042 complement(5725644..5726390) 1 NC_009617.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: cpf:CPF_0262 peptidyl-prolyl cis-trans isomerase family protein; PpiC-type peptidyl-prolyl cis-trans isomerase 5726390 5296042 Cbei_4890 Clostridium beijerinckii NCIMB 8052 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001311952.1 5725644 R 290402 CDS YP_001311953.1 150019699 5296043 5726571..5727248 1 NC_009617.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 5727248 5296043 Cbei_4891 Clostridium beijerinckii NCIMB 8052 uracil-DNA glycosylase YP_001311953.1 5726571 D 290402 CDS YP_001311954.1 150019700 5296044 5727389..5727799 1 NC_009617.1 KEGG: cpr:CPR_1540 hypothetical protein; hypothetical protein 5727799 5296044 Cbei_4892 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311954.1 5727389 D 290402 CDS YP_001311955.1 150019701 5296443 5728408..5729139 1 NC_009617.1 Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 5729139 5296443 Cbei_4893 Clostridium beijerinckii NCIMB 8052 NAD-dependent deacetylase YP_001311955.1 5728408 D 290402 CDS YP_001311956.1 150019702 5296046 complement(5729311..5730543) 1 NC_009617.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: cpf:CPF_0130 CinA family protein; competence damage-inducible protein A 5730543 5296046 Cbei_4894 Clostridium beijerinckii NCIMB 8052 competence damage-inducible protein A YP_001311956.1 5729311 R 290402 CDS YP_001311957.1 150019703 5296047 complement(5731028..5731981) 1 NC_009617.1 TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein; KEGG: cpr:CPR_0098 glucose kinase; ROK family glucokinase 5731981 5296047 Cbei_4895 Clostridium beijerinckii NCIMB 8052 ROK family glucokinase YP_001311957.1 5731028 R 290402 CDS YP_001311958.1 150019704 5296048 complement(5732093..5732329) 1 NC_009617.1 KEGG: cpr:CPR_0097 hypothetical protein; hypothetical protein 5732329 5296048 Cbei_4896 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311958.1 5732093 R 290402 CDS YP_001311959.1 150019705 5296049 complement(5732570..5734651) 1 NC_009617.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 5734651 5296049 Cbei_4897 Clostridium beijerinckii NCIMB 8052 elongation factor G YP_001311959.1 5732570 R 290402 CDS YP_001311960.1 150019706 5296050 5734924..5736423 1 NC_009617.1 KEGG: cac:CAC1982 predicted membrane protein; hypothetical protein 5736423 5296050 Cbei_4898 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311960.1 5734924 D 290402 CDS YP_001311961.1 150019707 5296051 complement(5736730..5737182) 1 NC_009617.1 PFAM: VanZ family protein; KEGG: cpr:CPR_0088 acetobutylicum phosphotransbutyrylase; VanZ family protein 5737182 5296051 Cbei_4899 Clostridium beijerinckii NCIMB 8052 VanZ family protein YP_001311961.1 5736730 R 290402 CDS YP_001311962.1 150019708 5296052 complement(5737228..5737665) 1 NC_009617.1 KEGG: cpr:CPR_0085 hypothetical protein; hypothetical protein 5737665 5296052 Cbei_4900 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311962.1 5737228 R 290402 CDS YP_001311963.1 150019709 5296448 complement(5743527..5744333) 1 NC_009617.1 PFAM: protein of unknown function DUF299; KEGG: cpe:CPE2242 hypothetical protein; hypothetical protein 5744333 5296448 Cbei_4901 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311963.1 5743527 R 290402 CDS YP_001311964.1 150019710 5296054 5744557..5745306 1 NC_009617.1 KEGG: cpe:CPE2244 lipoprotein signal peptidase; lipoprotein signal peptidase 5745306 5296054 Cbei_4902 Clostridium beijerinckii NCIMB 8052 lipoprotein signal peptidase YP_001311964.1 5744557 D 290402 CDS YP_001311965.1 150019711 5296450 complement(5745853..5746800) 1 NC_009617.1 TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; KEGG: baa:BA_0106 lactate/malate dehydrogenase, NAD binding domain; L-lactate dehydrogenase 5746800 5296450 Cbei_4903 Clostridium beijerinckii NCIMB 8052 L-lactate dehydrogenase YP_001311965.1 5745853 R 290402 CDS YP_001311966.1 150019712 5296454 complement(5752779..5753891) 1 NC_009617.1 TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; PFAM: Nucleotidyl transferase; KEGG: cpe:CPE0069 glycogen biosynthesis protein; glucose-1-phosphate adenylyltransferase, GlgD subunit 5753891 5296454 Cbei_4904 Clostridium beijerinckii NCIMB 8052 glucose-1-phosphate adenylyltransferase, GlgD subunit YP_001311966.1 5752779 R 290402 CDS YP_001311967.1 150019713 5296057 complement(5753917..5755077) 1 NC_009617.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 5755077 glgC 5296057 glgC Clostridium beijerinckii NCIMB 8052 glucose-1-phosphate adenylyltransferase YP_001311967.1 5753917 R 290402 CDS YP_001311968.1 150019714 5296058 complement(5755354..5757180) 1 NC_009617.1 PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: cpr:CPR_0084 pullulanase; alpha amylase 5757180 5296058 Cbei_4906 Clostridium beijerinckii NCIMB 8052 alpha amylase YP_001311968.1 5755354 R 290402 CDS YP_001311969.1 150019715 5296059 complement(5757194..5759629) 1 NC_009617.1 TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase, family 35; KEGG: cpr:CPR_0083 glycogen phosphorylase; glycogen/starch/alpha-glucan phosphorylase 5759629 5296059 Cbei_4907 Clostridium beijerinckii NCIMB 8052 glycogen/starch/alpha-glucan phosphorylase YP_001311969.1 5757194 R 290402 CDS YP_001311970.1 150019716 5296060 complement(5759663..5761102) 1 NC_009617.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 5761102 glgA 5296060 glgA Clostridium beijerinckii NCIMB 8052 glycogen synthase YP_001311970.1 5759663 R 290402 CDS YP_001311971.1 150019717 5296061 complement(5761198..5762835) 1 NC_009617.1 TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase, catalytic region; alpha amylase, C-terminal all-beta; SMART: alpha amylase, catalytic sub domain; KEGG: cpf:CPF_1840 1,4-alpha-glucan branching enzyme; 1,4-alpha-glucan branching protein 5762835 5296061 Cbei_4909 Clostridium beijerinckii NCIMB 8052 1,4-alpha-glucan branching protein YP_001311971.1 5761198 R 290402 CDS YP_001311972.1 150019718 5296460 complement(5775717..5776664) 1 NC_009617.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cpr:CPR_0069 acetyltransferase, GNAT family; N-acetyltransferase GCN5 5776664 5296460 Cbei_4910 Clostridium beijerinckii NCIMB 8052 N-acetyltransferase GCN5 YP_001311972.1 5775717 R 290402 CDS YP_001311973.1 150019719 5296063 complement(5777279..5778100) 1 NC_009617.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: msu:MS2377 PTS system, mannose-specific IID component; PTS system mannose/fructose/sorbose family transporter subunit IID 5778100 5296063 Cbei_4911 Clostridium beijerinckii NCIMB 8052 PTS system mannose/fructose/sorbose family transporter subunit IID YP_001311973.1 5777279 R 290402 CDS YP_001311974.1 150019720 5296064 complement(5778122..5778913) 1 NC_009617.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS, sorbose-specific IIC subunit; KEGG: msu:MS2378 PTS system, mannose-specific IIC component; PTS system mannose/fructose/sorbose family transporter subunit IIC 5778913 5296064 Cbei_4912 Clostridium beijerinckii NCIMB 8052 PTS system mannose/fructose/sorbose family transporter subunit IIC YP_001311974.1 5778122 R 290402 CDS YP_001311975.1 150019721 5296065 complement(5779063..5779554) 1 NC_009617.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; PFAM: PTS system sorbose subfamily IIB component; KEGG: stm:STM1830 Sugar Specific PTS family, mannose-specific enzyme IIAB; PTS system mannose/fructose/sorbose family transporter subunit IIB 5779554 5296065 Cbei_4913 Clostridium beijerinckii NCIMB 8052 PTS system mannose/fructose/sorbose family transporter subunit IIB YP_001311975.1 5779063 R 290402 CDS YP_001311976.1 150019722 5296066 complement(5779629..5780051) 1 NC_009617.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA subunit; PFAM: PTS system fructose subfamily IIA component; KEGG: lwe:lwe0743 sugar phosphotransferasesystem component IIA; PTS system mannose/fructose/sorbose family transporter subunit IIA 5780051 5296066 Cbei_4914 Clostridium beijerinckii NCIMB 8052 PTS system mannose/fructose/sorbose family transporter subunit IIA YP_001311976.1 5779629 R 290402 CDS YP_001311977.1 150019723 5296067 complement(5780266..5783064) 1 NC_009617.1 PFAM: sigma-54 factor, interaction domain-containing protein; PTS system fructose subfamily IIA component; PRD domain protein; SMART: ATPase AAA; KEGG: lwe:lwe0744 transcriptional regulator LevR family; sigma-54 factor interaction domain-containing protein 5783064 5296067 Cbei_4915 Clostridium beijerinckii NCIMB 8052 sigma-54 factor interaction domain-containing protein YP_001311977.1 5780266 R 290402 CDS YP_001311978.1 150019724 5296068 complement(5783245..5784006) 1 NC_009617.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: cpr:CPR_0067 HesA/MoeB/ThiF family protein; UBA/THIF-type NAD/FAD binding protein 5784006 5296068 Cbei_4916 Clostridium beijerinckii NCIMB 8052 UBA/THIF-type NAD/FAD binding protein YP_001311978.1 5783245 R 290402 CDS YP_001311979.1 150019725 5296069 5784440..5785132 1 NC_009617.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 5785132 5296069 Cbei_4917 Clostridium beijerinckii NCIMB 8052 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_001311979.1 5784440 D 290402 CDS YP_001311980.1 150019726 5296070 complement(5785244..5787250) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: cac:CAC2547 possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain; methyl-accepting chemotaxis sensory transducer 5787250 5296070 Cbei_4918 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001311980.1 5785244 R 290402 CDS YP_001311981.1 150019727 5296071 complement(5787639..5788460) 1 NC_009617.1 PFAM: nitroreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cac:CAC3359 nitroreductase fused to ferredoxin domain; nitroreductase 5788460 5296071 Cbei_4919 Clostridium beijerinckii NCIMB 8052 nitroreductase YP_001311981.1 5787639 R 290402 CDS YP_001311982.1 150019728 5296072 complement(5788541..5789206) 1 NC_009617.1 TetR family transcriptional regulator 5789206 5296072 Cbei_4920 Clostridium beijerinckii NCIMB 8052 TetR family transcriptional regulator YP_001311982.1 5788541 R 290402 CDS YP_001311983.1 150019729 5296073 complement(5789342..5790682) 1 NC_009617.1 PFAM: Ion transport 2 domain protein; KEGG: vvy:VV0782 potassium channel protein; Ion transport 2 domain-containing protein 5790682 5296073 Cbei_4921 Clostridium beijerinckii NCIMB 8052 Ion transport 2 domain-containing protein YP_001311983.1 5789342 R 290402 CDS YP_001311984.1 150019730 5296074 5790843..5791766 1 NC_009617.1 KEGG: ctc:CTC02189 hypothetical protein; hypothetical protein 5791766 5296074 Cbei_4922 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311984.1 5790843 D 290402 CDS YP_001311985.1 150019731 5296075 5792133..5792564 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: bat:BAS2992 transcriptional regulator, MarR family; MarR family transcriptional regulator 5792564 5296075 Cbei_4923 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001311985.1 5792133 D 290402 CDS YP_001311986.1 150019732 5296076 5792584..5793789 1 NC_009617.1 PFAM: major facilitator superfamily MFS_1; KEGG: lmf:LMOf2365_2817 major facilitator family transporter; major facilitator superfamily transporter 5793789 5296076 Cbei_4924 Clostridium beijerinckii NCIMB 8052 major facilitator superfamily transporter YP_001311986.1 5792584 D 290402 CDS YP_001311987.1 150019733 5296077 complement(5794715..5796460) 1 NC_009617.1 KEGG: cno:NT01CX_1207 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 5796460 5296077 Cbei_4925 Clostridium beijerinckii NCIMB 8052 PAS/PAC sensor signal transduction histidine kinase YP_001311987.1 5794715 R 290402 CDS YP_001311988.1 150019734 5296078 complement(5797173..5798429) 1 NC_009617.1 PFAM: uncharacterised conserved protein UCP033563; KEGG: cac:CAC0016 related to HTH domain of SpoOJ/ParA/ParB/repB family, involved in chromosome partitioning; hypothetical protein 5798429 5296078 Cbei_4926 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001311988.1 5797173 R 290402 CDS YP_001311989.1 150019735 5296079 complement(5798447..5799355) 1 NC_009617.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: cac:CAC0015 D-3-phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 5799355 5296079 Cbei_4927 Clostridium beijerinckii NCIMB 8052 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit YP_001311989.1 5798447 R 290402 CDS YP_001311990.1 150019736 5296080 complement(5800038..5801693) 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 5; KEGG: cac:CAC3634 oligopeptide ABC transporter periplasmic protein component; extracellular solute-binding protein 5801693 5296080 Cbei_4928 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001311990.1 5800038 R 290402 CDS YP_001311991.1 150019737 5296081 complement(5801841..5802824) 1 NC_009617.1 TIGRFAM: peptide ABC transporter ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter C-terminal domain protein; SMART: ATPase AAA; KEGG: cac:CAC3635 oligopeptide ABC transporter ATPase component; peptide ABC transporter ATPase 5802824 5296081 Cbei_4929 Clostridium beijerinckii NCIMB 8052 peptide ABC transporter ATPase YP_001311991.1 5801841 R 290402 CDS YP_001311992.1 150019738 5296082 complement(5802824..5803831) 1 NC_009617.1 TIGRFAM: peptide ABC transporter ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter C-terminal domain protein; SMART: ATPase AAA; KEGG: cac:CAC3642 oligopeptide ABC transporter ATPase component; peptide ABC transporter ATPase 5803831 5296082 Cbei_4930 Clostridium beijerinckii NCIMB 8052 peptide ABC transporter ATPase YP_001311992.1 5802824 R 290402 CDS YP_001311993.1 150019739 5296083 complement(5803848..5804792) 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CAC3643 oligopeptide ABC transporter permease component; binding-protein-dependent transport system inner membrane protein 5804792 5296083 Cbei_4931 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001311993.1 5803848 R 290402 CDS YP_001311994.1 150019740 5296084 complement(5804806..5805732) 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CAC3644 oligopeptide ABC transporter permease component; binding-protein-dependent transport system inner membrane protein 5805732 5296084 Cbei_4932 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001311994.1 5804806 R 290402 CDS YP_001311995.1 150019741 5296085 complement(5806307..5807302) 1 NC_009617.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: cac:CAC1574 NAD-dependent 4-hydroxybutyrate dehydrogenase; iron-containing alcohol dehydrogenase 5807302 5296085 Cbei_4933 Clostridium beijerinckii NCIMB 8052 iron-containing alcohol dehydrogenase YP_001311995.1 5806307 R 290402 CDS YP_001311996.1 150019742 5296086 complement(5807365..5808756) 1 NC_009617.1 catalyzes the formation of 4-aminobutyraldehyde from putrescine and 2-oxoglutarate; putrescine--2-oxoglutarate aminotransferase 5808756 5296086 Cbei_4934 Clostridium beijerinckii NCIMB 8052 putrescine--2-oxoglutarate aminotransferase YP_001311996.1 5807365 R 290402 CDS YP_001311997.1 150019743 5296087 5809068..5809820 1 NC_009617.1 PFAM: LuxR family transcriptional regulator; KEGG: mva:Mvan_5474 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 5809820 5296087 Cbei_4935 Clostridium beijerinckii NCIMB 8052 LuxR family transcriptional regulator YP_001311997.1 5809068 D 290402 CDS YP_001311998.1 150019744 5296088 complement(5810066..5811547) 1 NC_009617.1 PFAM: aldehyde dehydrogenase; KEGG: lpn:lpg0238 glycine betaine aldehyde dehydrogenase; aldehyde dehydrogenase 5811547 5296088 Cbei_4936 Clostridium beijerinckii NCIMB 8052 aldehyde dehydrogenase YP_001311998.1 5810066 R 290402 CDS YP_001311999.1 150019745 5296089 complement(5811826..5813205) 1 NC_009617.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: pab:PAB0090 D-aminoacylase (aspartate, glutamate etc); amidohydrolase 3 5813205 5296089 Cbei_4937 Clostridium beijerinckii NCIMB 8052 amidohydrolase 3 YP_001311999.1 5811826 R 290402 CDS YP_001312000.1 150019746 5296090 complement(5813304..5814104) 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rxy:Rxyl_2915 binding-protein-dependent transport systems inner membrane component; ornithine carbamoyltransferase 5814104 5296090 Cbei_4938 Clostridium beijerinckii NCIMB 8052 ornithine carbamoyltransferase YP_001312000.1 5813304 R 290402 CDS YP_001312001.1 150019747 5296091 complement(5814106..5814969) 1 NC_009617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bat:BAS1200 spermidine/putrescine ABC transporter permease; binding-protein-dependent transport system inner membrane protein 5814969 5296091 Cbei_4939 Clostridium beijerinckii NCIMB 8052 binding-protein-dependent transport system inner membrane protein YP_001312001.1 5814106 R 290402 CDS YP_001312002.1 150019748 5296092 complement(5814982..5816109) 1 NC_009617.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter; Transport-associated OB domain protein; SMART: ATPase AAA; KEGG: mkm:Mkms_2612 spermidine/putrescine ABC transporter ATPase subunit; spermidine/putrescine ABC transporter ATPase 5816109 5296092 Cbei_4940 Clostridium beijerinckii NCIMB 8052 spermidine/putrescine ABC transporter ATPase YP_001312002.1 5814982 R 290402 CDS YP_001312003.1 150019749 5296093 complement(5816141..5817235) 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 1; KEGG: sth:STH468 spermidine/putrescine ABC transporter spermidine/putrescine-binding protein; extracellular solute-binding protein 5817235 5296093 Cbei_4941 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001312003.1 5816141 R 290402 CDS YP_001312004.1 150019750 5296094 complement(5817366..5817713) 1 NC_009617.1 PFAM: nitrogen regulatory protein P-II; KEGG: mta:Moth_0193 nitrogen regulatory protein P-II (GlnB, GlnK); nitrogen regulatory protein P-II 5817713 5296094 Cbei_4942 Clostridium beijerinckii NCIMB 8052 nitrogen regulatory protein P-II YP_001312004.1 5817366 R 290402 CDS YP_001312005.1 150019751 5296095 complement(5817880..5818641) 1 NC_009617.1 PFAM: LuxR family transcriptional regulator; KEGG: sil:SPO1488 transcriptional regulator, LuxR family; response regulator receiver protein 5818641 5296095 Cbei_4943 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001312005.1 5817880 R 290402 CDS YP_001312006.1 150019752 5296096 complement(5818861..5819037) 1 NC_009617.1 KEGG: cpr:CPR_0061 hypothetical protein; hypothetical protein 5819037 5296096 Cbei_4944 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312006.1 5818861 R 290402 CDS YP_001312007.1 150019753 5296097 complement(5819184..5821214) 1 NC_009617.1 PFAM: peptidase M13, neprilysin; peptidase M13; KEGG: mfl:Mfl241 membrane metallo endopeptidase; endothelin-converting protein 1 5821214 5296097 Cbei_4945 Clostridium beijerinckii NCIMB 8052 endothelin-converting protein 1 YP_001312007.1 5819184 R 290402 CDS YP_001312008.1 150019754 5296098 complement(5821358..5822632) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; CHAP domain containing protein; SH3, type 3 domain protein; SMART: SH3 domain protein domain protein; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; SH3 type 3 domain-containing protein 5822632 5296098 Cbei_4946 Clostridium beijerinckii NCIMB 8052 SH3 type 3 domain-containing protein YP_001312008.1 5821358 R 290402 CDS YP_001312009.1 150019755 5296099 complement(5822976..5823260) 1 NC_009617.1 KEGG: cno:NT01CX_0822 sigma-K factor processing regulatory protein BofA; sigma-K factor processing regulatory protein BofA 5823260 5296099 Cbei_4947 Clostridium beijerinckii NCIMB 8052 sigma-K factor processing regulatory protein BofA YP_001312009.1 5822976 R 290402 CDS YP_001312010.1 150019756 5296100 complement(5823266..5823544) 1 NC_009617.1 KEGG: cpf:CPF_0055 hypothetical protein; hypothetical protein 5823544 5296100 Cbei_4948 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312010.1 5823266 R 290402 CDS YP_001312011.1 150019757 5296101 complement(5823759..5824358) 1 NC_009617.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 5824358 recR 5296101 recR Clostridium beijerinckii NCIMB 8052 recombination protein RecR YP_001312011.1 5823759 R 290402 CDS YP_001312012.1 150019758 5296102 complement(5824467..5824841) 1 NC_009617.1 PFAM: conserved hypothetical protein 103; KEGG: cac:CAC0126 uncharacterized conserved protein, YbaB family; hypothetical protein 5824841 5296102 Cbei_4950 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312012.1 5824467 R 290402 CDS YP_001312013.1 150019759 5296103 complement(5824894..5826540) 1 NC_009617.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 5826540 5296103 Cbei_4951 Clostridium beijerinckii NCIMB 8052 DNA polymerase III subunits gamma and tau YP_001312013.1 5824894 R 290402 CDS YP_001312014.1 150019760 5296104 5826839..5827630 1 NC_009617.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 5827630 thyA 5296104 thyA Clostridium beijerinckii NCIMB 8052 thymidylate synthase YP_001312014.1 5826839 D 290402 CDS YP_001312015.1 150019761 5296105 5827699..5828190 1 NC_009617.1 PFAM: dihydrofolate reductase region; KEGG: cpr:CPR_0054 dihydrofolate reductase; dihydrofolate reductase 5828190 5296105 Cbei_4953 Clostridium beijerinckii NCIMB 8052 dihydrofolate reductase YP_001312015.1 5827699 D 290402 CDS YP_001312016.1 150019762 5296106 5828317..5829201 1 NC_009617.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: cff:CFF8240_0924 fumarylacetoacetate hydrolase family protein; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 5829201 5296106 Cbei_4954 Clostridium beijerinckii NCIMB 8052 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_001312016.1 5828317 D 290402 CDS YP_001312017.1 150019763 5296461 complement(5829945..5830496) 1 NC_009617.1 KEGG: ctc:CTC00989 hypothetical protein; hypothetical protein 5830496 5296461 Cbei_4955 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312017.1 5829945 R 290402 CDS YP_001312018.1 150019764 5296108 complement(5830600..5831037) 1 NC_009617.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 5831037 5296108 Cbei_4956 Clostridium beijerinckii NCIMB 8052 camphor resistance protein CrcB YP_001312018.1 5830600 R 290402 CDS YP_001312019.1 150019765 5296109 complement(5831126..5831761) 1 NC_009617.1 TIGRFAM: integral membrane protein TIGR01906; PFAM: Integral membrane protein 1906; KEGG: cpr:CPR_2277 integral membrane protein; hypothetical protein 5831761 5296109 Cbei_4957 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312019.1 5831126 R 290402 CDS YP_001312020.1 150019766 5296110 complement(5831896..5832363) 1 NC_009617.1 PFAM: CheC domain protein; KEGG: cac:CAC0586 CheX protein (uncharacterized ORF in chemotaxis operon); chemotaxis protein CheC 5832363 5296110 Cbei_4958 Clostridium beijerinckii NCIMB 8052 chemotaxis protein CheC YP_001312020.1 5831896 R 290402 CDS YP_001312021.1 150019767 5296111 complement(5832345..5833280) 1 NC_009617.1 PFAM: response regulator receiver; KEGG: cac:CAC0585 N-terminal CheY reciever domain fused to C-terminal uncharacterized CheX-like domain; response regulator receiver protein 5833280 5296111 Cbei_4959 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001312021.1 5832345 R 290402 CDS YP_001312022.1 150019768 5296112 complement(5833573..5837013) 1 NC_009617.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase 5837013 5296112 Cbei_4960 Clostridium beijerinckii NCIMB 8052 pyruvate carboxylase YP_001312022.1 5833573 R 290402 CDS YP_001312023.1 150019769 5296113 complement(5837323..5837763) 1 NC_009617.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: dsy:DSY1289 hypothetical protein; large conductance mechanosensitive channel protein 5837763 5296113 Cbei_4961 Clostridium beijerinckii NCIMB 8052 large conductance mechanosensitive channel protein YP_001312023.1 5837323 R 290402 CDS YP_001312024.1 150019770 5296114 complement(5838076..5838879) 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: ctc:CTC01849 transcriptional regulatory protein; response regulator receiver protein 5838879 5296114 Cbei_4962 Clostridium beijerinckii NCIMB 8052 response regulator receiver protein YP_001312024.1 5838076 R 290402 CDS YP_001312025.1 150019771 5296115 complement(5838924..5840684) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase internal region; KEGG: bld:BLi00440 ABC transporter (permease); RBL00398; integral membrane sensor signal transduction histidine kinase 5840684 5296115 Cbei_4963 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001312025.1 5838924 R 290402 CDS YP_001312026.1 150019772 5296116 complement(5840700..5842016) 1 NC_009617.1 PFAM: extracellular solute-binding protein, family 1; KEGG: bha:BH3680 multiple sugar transport system substrate-binding protein; extracellular solute-binding protein 5842016 5296116 Cbei_4964 Clostridium beijerinckii NCIMB 8052 extracellular solute-binding protein YP_001312026.1 5840700 R 290402 CDS YP_001312027.1 150019773 5296117 complement(5842140..5843852) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cno:NT01CX_0316 membrane assosiated methyl-accepting chemotaxis protein with HAMP domain; methyl-accepting chemotaxis sensory transducer 5843852 5296117 Cbei_4965 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001312027.1 5842140 R 290402 CDS YP_001312028.1 150019774 5296118 complement(5844065..5845090) 1 NC_009617.1 KEGG: rle:pRL90225 binding periplasmic protein of ABC transporter; sugar ABC transporter periplasmic protein-like protein 5845090 5296118 Cbei_4966 Clostridium beijerinckii NCIMB 8052 sugar ABC transporter periplasmic protein-like protein YP_001312028.1 5844065 R 290402 CDS YP_001312029.1 150019775 5296119 complement(5845209..5846225) 1 NC_009617.1 PFAM: inner-membrane translocator; KEGG: tte:TTE0205 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; monosaccharide-transporting ATPase 5846225 5296119 Cbei_4967 Clostridium beijerinckii NCIMB 8052 monosaccharide-transporting ATPase YP_001312029.1 5845209 R 290402 CDS YP_001312030.1 150019776 5296120 complement(5846209..5847720) 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: tte:TTE0763 ABC-type sugar (aldose) transport system, ATPase component; ABC transporter 5847720 5296120 Cbei_4968 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001312030.1 5846209 R 290402 CDS YP_001312031.1 150019777 5296121 complement(5848327..5848845) 1 NC_009617.1 PFAM: nitroreductase; KEGG: cac:CAC2508 nitroreductase; nitroreductase 5848845 5296121 Cbei_4969 Clostridium beijerinckii NCIMB 8052 nitroreductase YP_001312031.1 5848327 R 290402 CDS YP_001312032.1 150019778 5296122 complement(5848933..5849586) 1 NC_009617.1 PFAM: NADPH-dependent FMN reductase; KEGG: cac:CAC2520 multimeric flavodoxin (WrbA) domain containing protein; NADPH-dependent FMN reductase 5849586 5296122 Cbei_4970 Clostridium beijerinckii NCIMB 8052 NADPH-dependent FMN reductase YP_001312032.1 5848933 R 290402 CDS YP_001312033.1 150019779 5296123 5849721..5850083 1 NC_009617.1 PFAM: helix-turn-helix, HxlR type; KEGG: cac:CAC0195 predicted transcriptional regulator; HxlR family transcriptional regulator 5850083 5296123 Cbei_4971 Clostridium beijerinckii NCIMB 8052 HxlR family transcriptional regulator YP_001312033.1 5849721 D 290402 CDS YP_001312034.1 150019780 5296124 complement(5850205..5851812) 1 NC_009617.1 PFAM: glycoside hydrolase, family 43; KEGG: oih:OB3125 xylan 1,4-beta-xylosidase; alpha-N-arabinofuranosidase 5851812 5296124 Cbei_4972 Clostridium beijerinckii NCIMB 8052 alpha-N-arabinofuranosidase YP_001312034.1 5850205 R 290402 CDS YP_001312035.1 150019781 5296125 complement(5852015..5852992) 1 NC_009617.1 PFAM: glycoside hydrolase, family 43; KEGG: pat:Patl_3728 alpha-L-arabinofuranosidase; alpha-N-arabinofuranosidase 5852992 5296125 Cbei_4973 Clostridium beijerinckii NCIMB 8052 alpha-N-arabinofuranosidase YP_001312035.1 5852015 R 290402 CDS YP_001312036.1 150019782 5296126 complement(5853088..5855217) 1 NC_009617.1 PFAM: glycoside hydrolase, family 3 domain protein; KEGG: pat:Patl_0825 beta-glucosidase; glycoside hydrolase family protein 5855217 5296126 Cbei_4974 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase family protein YP_001312036.1 5853088 R 290402 CDS YP_001312037.1 150019783 5296127 5855368..5856138 1 NC_009617.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: cpr:CPR_1432 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 5856138 5296127 Cbei_4975 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001312037.1 5855368 D 290402 CDS YP_001312038.1 150019784 5296128 5856310..5857023 1 NC_009617.1 PFAM: helix-turn-helix protein RpiR; KEGG: cac:CAC3424 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 5857023 5296128 Cbei_4976 Clostridium beijerinckii NCIMB 8052 RpiR family transcriptional regulator YP_001312038.1 5856310 D 290402 CDS YP_001312039.1 150019785 5296129 5857250..5858791 1 NC_009617.1 TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: cac:CAC3425 PTS system, (possibly glucose-specific) IIBC component; PTS system glucose-like transporter subunit IIB 5858791 5296129 Cbei_4977 Clostridium beijerinckii NCIMB 8052 PTS system glucose-like transporter subunit IIB YP_001312039.1 5857250 D 290402 CDS YP_001312040.1 150019786 5296130 5858813..5860150 1 NC_009617.1 PFAM: glycoside hydrolase, family 4; KEGG: cac:CAC3426 6-phospho-alpha-glucosidase; glycoside hydrolase 5860150 5296130 Cbei_4978 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001312040.1 5858813 D 290402 CDS YP_001312041.1 150019787 5296131 complement(5861058..5861216) 1 NC_009617.1 hypothetical protein 5861216 5296131 Cbei_4979 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312041.1 5861058 R 290402 CDS YP_001312042.1 150019788 5296132 complement(5861550..5862998) 1 NC_009617.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC3668 MDR-type permease; EmrB/QacA family drug resistance transporter 5862998 5296132 Cbei_4980 Clostridium beijerinckii NCIMB 8052 EmrB/QacA family drug resistance transporter YP_001312042.1 5861550 R 290402 CDS YP_001312043.1 150019789 5296133 complement(5863052..5863495) 1 NC_009617.1 PFAM: regulatory protein, MarR; KEGG: cac:CAC3669 transcriptional regulator, MarR/EmrR family; MarR family transcriptional regulator 5863495 5296133 Cbei_4981 Clostridium beijerinckii NCIMB 8052 MarR family transcriptional regulator YP_001312043.1 5863052 R 290402 CDS YP_001312044.1 150019790 5296134 complement(5864781..5865257) 1 NC_009617.1 TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease, EIIA 1 domain; KEGG: bsu:BG11450 PTS glucose-specific enzyme IIA component; PTS system glucose subfamily transporter subunit IIA 5865257 5296134 Cbei_4982 Clostridium beijerinckii NCIMB 8052 PTS system glucose subfamily transporter subunit IIA YP_001312044.1 5864781 R 290402 CDS YP_001312045.1 150019791 5296135 complement(5865268..5866824) 1 NC_009617.1 TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: bcl:ABC0713 PTS system, glucose-specific enzyme II, ABC component; PTS system glucose-like transporter subunit IIB 5866824 5296135 Cbei_4983 Clostridium beijerinckii NCIMB 8052 PTS system glucose-like transporter subunit IIB YP_001312045.1 5865268 R 290402 CDS YP_001312046.1 150019792 5296136 complement(5866915..5868237) 1 NC_009617.1 PFAM: glycoside hydrolase, family 4; KEGG: bcl:ABC2078 maltose-6'-phosphate glucosidase; glycoside hydrolase 5868237 5296136 Cbei_4984 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001312046.1 5866915 R 290402 CDS YP_001312047.1 150019793 5296137 5868548..5869291 1 NC_009617.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: cac:CAC0191 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 5869291 5296137 Cbei_4985 Clostridium beijerinckii NCIMB 8052 RpiR family transcriptional regulator YP_001312047.1 5868548 D 290402 CDS YP_001312048.1 150019794 5296138 complement(5869734..5870429) 1 NC_009617.1 PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_0126 pneumococcal surface protein A; cell wall binding repeat-containing protein 5870429 5296138 Cbei_4986 Clostridium beijerinckii NCIMB 8052 cell wall binding repeat-containing protein YP_001312048.1 5869734 R 290402 CDS YP_001312049.1 150019795 5296139 5870614..5870916 1 NC_009617.1 hypothetical protein 5870916 5296139 Cbei_4987 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312049.1 5870614 D 290402 CDS YP_001312050.1 150019796 5296140 complement(5870979..5871806) 1 NC_009617.1 KEGG: syf:Synpcc7942_0761 hypothetical protein; hypothetical protein 5871806 5296140 Cbei_4988 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312050.1 5870979 R 290402 CDS YP_001312051.1 150019797 5296141 complement(5872554..5872940) 1 NC_009617.1 hypothetical protein 5872940 5296141 Cbei_4989 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312051.1 5872554 R 290402 CDS YP_001312052.1 150019798 5296142 complement(5872941..5873693) 1 NC_009617.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: cya:CYA_2410 RNA polymerase sigma factor RpoD; RNA polymerase sigma-32 subunit RpoH 5873693 5296142 Cbei_4990 Clostridium beijerinckii NCIMB 8052 RNA polymerase sigma-32 subunit RpoH YP_001312052.1 5872941 R 290402 CDS YP_001312053.1 150019799 5296143 complement(5873735..5875438) 1 NC_009617.1 TIGRFAM: phage minor structural protein; KEGG: cno:NT01CX_2159 phage endopeptidase; phage minor structural protein 5875438 5296143 Cbei_4991 Clostridium beijerinckii NCIMB 8052 phage minor structural protein YP_001312053.1 5873735 R 290402 CDS YP_001312054.1 150019800 5296144 complement(5875884..5876441) 1 NC_009617.1 KEGG: pfa:PF11_0207 hypothetical protein; hypothetical protein 5876441 5296144 Cbei_4992 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312054.1 5875884 R 290402 CDS YP_001312055.1 150019801 5296145 complement(5876463..5876705) 1 NC_009617.1 hypothetical protein 5876705 5296145 Cbei_4993 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312055.1 5876463 R 290402 CDS YP_001312056.1 150019802 5296146 complement(5877062..5878519) 1 NC_009617.1 KEGG: tte:TTE2242 transposase; transposase 5878519 5296146 Cbei_4994 Clostridium beijerinckii NCIMB 8052 transposase YP_001312056.1 5877062 R 290402 CDS YP_001312057.1 150019803 5296147 5878691..5878969 1 NC_009617.1 KEGG: sao:SAOUHSC_02218 hypothetical protein; hypothetical protein 5878969 5296147 Cbei_4995 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312057.1 5878691 D 290402 CDS YP_001312058.1 150019804 5296148 complement(5879778..5880521) 1 NC_009617.1 PFAM: helix-turn-helix domain protein; KEGG: gfo:orf2614 HTH_3 family transcriptional regulator protein; helix-turn-helix domain-containing protein 5880521 5296148 Cbei_4996 Clostridium beijerinckii NCIMB 8052 helix-turn-helix domain-containing protein YP_001312058.1 5879778 R 290402 CDS YP_001312059.1 150019805 5296149 5880662..5880865 1 NC_009617.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 5880865 5296149 Cbei_4997 Clostridium beijerinckii NCIMB 8052 XRE family transcriptional regulator YP_001312059.1 5880662 D 290402 CDS YP_001312060.1 150019806 5296150 5881400..5883247 1 NC_009617.1 KEGG: bcl:ABC1368 hypothetical protein; ATPase-like protein 5883247 5296150 Cbei_4998 Clostridium beijerinckii NCIMB 8052 ATPase-like protein YP_001312060.1 5881400 D 290402 CDS YP_001312061.1 150019807 5296151 5883363..5883656 1 NC_009617.1 hypothetical protein 5883656 5296151 Cbei_4999 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312061.1 5883363 D 290402 CDS YP_001312062.1 150019808 5296152 5883667..5884017 1 NC_009617.1 hypothetical protein 5884017 5296152 Cbei_5000 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312062.1 5883667 D 290402 CDS YP_001312063.1 150019809 5296153 complement(5884369..5885340) 1 NC_009617.1 PFAM: phage integrase family protein; KEGG: cpe:CPE1095 probable integrase/recombinase; phage integrase family protein 5885340 5296153 Cbei_5001 Clostridium beijerinckii NCIMB 8052 phage integrase family protein YP_001312063.1 5884369 R 290402 CDS YP_001312064.1 150019810 5296154 complement(5885355..5886293) 1 NC_009617.1 PFAM: phage integrase family protein; KEGG: gka:GK2913 integrase/recombinase; phage integrase family protein 5886293 5296154 Cbei_5002 Clostridium beijerinckii NCIMB 8052 phage integrase family protein YP_001312064.1 5885355 R 290402 CDS YP_001312065.1 150019811 5296462 complement(5886777..5887952) 1 NC_009617.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: cac:CAC0877 cyclopropane fatty acid synthase; cyclopropane-fatty-acyl-phospholipid synthase 5887952 5296462 Cbei_5003 Clostridium beijerinckii NCIMB 8052 cyclopropane-fatty-acyl-phospholipid synthase YP_001312065.1 5886777 R 290402 CDS YP_001312066.1 150019812 5296156 complement(5888035..5888706) 1 NC_009617.1 PFAM: GntR family transcriptional regulator; GntR domain protein; Helix-turn-helix, type 11 domain protein; KEGG: cac:CAC2546 transcriptional regulator, FadR family; GntR family transcriptional regulator 5888706 5296156 Cbei_5004 Clostridium beijerinckii NCIMB 8052 GntR family transcriptional regulator YP_001312066.1 5888035 R 290402 CDS YP_001312067.1 150019813 5296157 complement(5888728..5889315) 1 NC_009617.1 KEGG: cac:CAC0610 hypothetical protein; hypothetical protein 5889315 5296157 Cbei_5005 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312067.1 5888728 R 290402 CDS YP_001312068.1 150019814 5296158 complement(5889332..5890036) 1 NC_009617.1 PFAM: LrgB family protein; KEGG: cac:CAC0611 predicted membrane protein, YohK family; LrgB family protein 5890036 5296158 Cbei_5006 Clostridium beijerinckii NCIMB 8052 LrgB family protein YP_001312068.1 5889332 R 290402 CDS YP_001312069.1 150019815 5296159 complement(5890033..5890383) 1 NC_009617.1 PFAM: LrgA family protein; KEGG: cac:CAC0612 predicted membrane protein YohJ family; LrgA family protein 5890383 5296159 Cbei_5007 Clostridium beijerinckii NCIMB 8052 LrgA family protein YP_001312069.1 5890033 R 290402 CDS YP_001312070.1 150019816 5296160 complement(5890672..5891121) 1 NC_009617.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: cac:CAC0123 cytosine deaminase; zinc-binding CMP/dCMP deaminase 5891121 5296160 Cbei_5008 Clostridium beijerinckii NCIMB 8052 zinc-binding CMP/dCMP deaminase YP_001312070.1 5890672 R 290402 CDS YP_001312071.1 150019817 5296161 complement(5891336..5892274) 1 NC_009617.1 PFAM: PfkB domain protein; KEGG: cpf:CPF_1782 fructokinase; ribokinase-like domain-containing protein 5892274 5296161 Cbei_5009 Clostridium beijerinckii NCIMB 8052 ribokinase-like domain-containing protein YP_001312071.1 5891336 R 290402 CDS YP_001312072.1 150019818 5296162 complement(5892267..5893724) 1 NC_009617.1 TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32, N terminal domain protein; Glycosyl hydrolase family 32, C-terminal domain protein; SMART: glycoside hydrolase, family 32; KEGG: cpr:CPR_1511 sucrose-6-phosphate hydrolase; sucrose-6-phosphate hydrolase 5893724 5296162 Cbei_5010 Clostridium beijerinckii NCIMB 8052 sucrose-6-phosphate hydrolase YP_001312072.1 5892267 R 290402 CDS YP_001312073.1 150019819 5296163 complement(5893746..5894738) 1 NC_009617.1 PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: cpe:CPE1533 probable transcriptional; periplasmic binding protein/LacI transcriptional regulator 5894738 5296163 Cbei_5011 Clostridium beijerinckii NCIMB 8052 periplasmic binding protein/LacI transcriptional regulator YP_001312073.1 5893746 R 290402 CDS YP_001312074.1 150019820 5296164 complement(5894928..5896283) 1 NC_009617.1 TIGRFAM: PTS system, sucrose-specific IIBC subunit; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: cpr:CPR_1513 PTS system, sucrose-specific IIBC component; PTS system sucrose-specific transporter subunit IIBC 5896283 5296164 Cbei_5012 Clostridium beijerinckii NCIMB 8052 PTS system sucrose-specific transporter subunit IIBC YP_001312074.1 5894928 R 290402 CDS YP_001312075.1 150019821 5296165 complement(5896632..5897105) 1 NC_009617.1 hypothetical protein 5897105 5296165 Cbei_5013 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312075.1 5896632 R 290402 CDS YP_001312076.1 150019822 5296166 complement(5897390..5897656) 1 NC_009617.1 hypothetical protein 5897656 5296166 Cbei_5014 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312076.1 5897390 R 290402 CDS YP_001312077.1 150019823 5296167 complement(5897649..5898542) 1 NC_009617.1 PFAM: StbA family protein; KEGG: hha:Hhal_1997 hypothetical protein; StbA family protein 5898542 5296167 Cbei_5015 Clostridium beijerinckii NCIMB 8052 StbA family protein YP_001312077.1 5897649 R 290402 CDS YP_001312078.1 150019824 5296168 complement(5898779..5898964) 1 NC_009617.1 hypothetical protein 5898964 5296168 Cbei_5016 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312078.1 5898779 R 290402 CDS YP_001312079.1 150019825 5296169 complement(5899317..5899802) 1 NC_009617.1 TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease, EIIA 1 domain; KEGG: bsu:BG11450 PTS glucose-specific enzyme IIA component; PTS system glucose subfamily transporter subunit IIA 5899802 5296169 Cbei_5017 Clostridium beijerinckii NCIMB 8052 PTS system glucose subfamily transporter subunit IIA YP_001312079.1 5899317 R 290402 CDS YP_001312080.1 150019826 5296170 complement(5899811..5901136) 1 NC_009617.1 PFAM: glycoside hydrolase, family 4; KEGG: lca:LSEI_2684 mannose-6-phosphate isomerase; glycoside hydrolase 5901136 5296170 Cbei_5018 Clostridium beijerinckii NCIMB 8052 glycoside hydrolase YP_001312080.1 5899811 R 290402 CDS YP_001312081.1 150019827 5296171 complement(5901197..5902792) 1 NC_009617.1 TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: eca:ECA3225 PTS system, alpha-glucoside-specific IIbc component; PTS system glucose-like transporter subunit IIB 5902792 5296171 Cbei_5019 Clostridium beijerinckii NCIMB 8052 PTS system glucose-like transporter subunit IIB YP_001312081.1 5901197 R 290402 CDS YP_001312082.1 150019828 5296172 complement(5902921..5903679) 1 NC_009617.1 PFAM: sugar isomerase (SIS); KEGG: eca:ECA3228 RpiR-family transcriptional regulator; RpiR family transcriptional regulator 5903679 5296172 Cbei_5020 Clostridium beijerinckii NCIMB 8052 RpiR family transcriptional regulator YP_001312082.1 5902921 R 290402 CDS YP_001312083.1 150019829 5296173 complement(5904170..5904607) 1 NC_009617.1 hypothetical protein 5904607 5296173 Cbei_5021 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312083.1 5904170 R 290402 CDS YP_001312084.1 150019830 5296174 complement(5904675..5905625) 1 NC_009617.1 hypothetical protein 5905625 5296174 Cbei_5022 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312084.1 5904675 R 290402 CDS YP_001312085.1 150019831 5296175 complement(5906317..5906664) 1 NC_009617.1 hypothetical protein 5906664 5296175 Cbei_5023 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312085.1 5906317 R 290402 CDS YP_001312086.1 150019832 5296176 complement(5906840..5908006) 1 NC_009617.1 KEGG: cac:CAC3515 alpha/beta superfamily hydrolase (possible peptidase); alpha/beta fold family hydrolase 5908006 5296176 Cbei_5024 Clostridium beijerinckii NCIMB 8052 alpha/beta fold family hydrolase YP_001312086.1 5906840 R 290402 CDS YP_001312087.1 150019833 5296177 complement(5908334..5909386) 1 NC_009617.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cac:CAC3516 membrane-associated histidine kinase with HAMP domain; integral membrane sensor signal transduction histidine kinase 5909386 5296177 Cbei_5025 Clostridium beijerinckii NCIMB 8052 integral membrane sensor signal transduction histidine kinase YP_001312087.1 5908334 R 290402 CDS YP_001312088.1 150019834 5296178 complement(5909391..5910083) 1 NC_009617.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cac:CAC3517 response regulator (CheY-like receiver domain and HTH-type DNA-binding domain); two component transcriptional regulator 5910083 5296178 Cbei_5026 Clostridium beijerinckii NCIMB 8052 two component transcriptional regulator YP_001312088.1 5909391 R 290402 CDS YP_001312089.1 150019835 5296463 complement(5911453..5913843) 1 NC_009617.1 TIGRFAM: ATPase P; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: cno:NT01CX_2343 cation-transporting ATPase, E1-E2 family; ATPase P 5913843 5296463 Cbei_5027 Clostridium beijerinckii NCIMB 8052 ATPase P YP_001312089.1 5911453 R 290402 CDS YP_001312090.1 150019836 5296180 5914074..5914796 1 NC_009617.1 TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: cpr:CPR_1407 1-acyl-sn-glycerol-3-phosphate acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 5914796 5296180 Cbei_5028 Clostridium beijerinckii NCIMB 8052 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_001312090.1 5914074 D 290402 CDS YP_001312091.1 150019837 5296181 5915019..5916596 1 NC_009617.1 PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cpr:CPR_1389 ATP-dependent RNA helicase, DEAD/DEAH box family; DEAD/DEAH box helicase 5916596 5296181 Cbei_5029 Clostridium beijerinckii NCIMB 8052 DEAD/DEAH box helicase YP_001312091.1 5915019 D 290402 CDS YP_001312092.1 150019838 5296182 complement(5916744..5917256) 1 NC_009617.1 hypothetical protein 5917256 5296182 Cbei_5030 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312092.1 5916744 R 290402 CDS YP_001312093.1 150019839 5296183 5917526..5919652 1 NC_009617.1 PFAM: sigma-54 factor, interaction domain-containing protein; PTS system fructose subfamily IIA component; PRD domain protein; SMART: ATPase AAA; KEGG: lwe:lwe0744 transcriptional regulator LevR family; sigma-54 factor interaction domain-containing protein 5919652 5296183 Cbei_5031 Clostridium beijerinckii NCIMB 8052 sigma-54 factor interaction domain-containing protein YP_001312093.1 5917526 D 290402 CDS YP_001312094.1 150019840 5296184 complement(5920145..5920777) 1 NC_009617.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: cac:CAC3562 HD superfamily hydrolase; metal dependent phosphohydrolase 5920777 5296184 Cbei_5032 Clostridium beijerinckii NCIMB 8052 metal dependent phosphohydrolase YP_001312094.1 5920145 R 290402 CDS YP_001312095.1 150019841 5296185 complement(5921032..5921370) 1 NC_009617.1 PFAM: nitrogen regulatory protein P-II; KEGG: chy:CHY_0072 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 5921370 5296185 Cbei_5033 Clostridium beijerinckii NCIMB 8052 nitrogen regulatory protein P-II YP_001312095.1 5921032 R 290402 CDS YP_001312096.1 150019842 5296186 complement(5921519..5922763) 1 NC_009617.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: llm:llmg_0910 ammonium transporter AmtB; ammonium transporter 5922763 5296186 Cbei_5034 Clostridium beijerinckii NCIMB 8052 ammonium transporter YP_001312096.1 5921519 R 290402 CDS YP_001312097.1 150019843 5296187 complement(5923058..5924017) 1 NC_009617.1 PFAM: aminoglycoside phosphotransferase; KEGG: sus:Acid_2507 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 5924017 5296187 Cbei_5035 Clostridium beijerinckii NCIMB 8052 aminoglycoside phosphotransferase YP_001312097.1 5923058 R 290402 CDS YP_001312098.1 150019844 5296188 complement(5924179..5925834) 1 NC_009617.1 TIGRFAM: sulfate transporter; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: cpr:CPR_1459 sulfate permease, SulP family; sulfate transporter 5925834 5296188 Cbei_5036 Clostridium beijerinckii NCIMB 8052 sulfate transporter YP_001312098.1 5924179 R 290402 CDS YP_001312099.1 150019845 5296189 complement(5926026..5926895) 1 NC_009617.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 5926895 5296189 Cbei_5037 Clostridium beijerinckii NCIMB 8052 dihydrodipicolinate synthase YP_001312099.1 5926026 R 290402 CDS YP_001312100.1 150019846 5296190 complement(5927243..5928019) 1 NC_009617.1 PFAM: protein of unknown function DUF81; KEGG: tde:TDE0189 membrane protein; hypothetical protein 5928019 5296190 Cbei_5038 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312100.1 5927243 R 290402 CDS YP_001312101.1 150019847 5296466 complement(5933716..5934288) 1 NC_009617.1 with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate; glutamine amidotransferase subunit PdxT 5934288 5296466 Cbei_5039 Clostridium beijerinckii NCIMB 8052 glutamine amidotransferase subunit PdxT YP_001312101.1 5933716 R 290402 CDS YP_001312102.1 150019848 5296192 complement(5934290..5935159) 1 NC_009617.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS 5935159 5296192 Cbei_5040 Clostridium beijerinckii NCIMB 8052 pyridoxal biosynthesis lyase PdxS YP_001312102.1 5934290 R 290402 CDS YP_001312103.1 150019849 5296193 complement(5935429..5936388) 1 NC_009617.1 PFAM: RNA methylase; KEGG: btk:BT9727_0797 methyltransferase; RNA methylase 5936388 5296193 Cbei_5041 Clostridium beijerinckii NCIMB 8052 RNA methylase YP_001312103.1 5935429 R 290402 CDS YP_001312104.1 150019850 5296194 5936824..5937978 1 NC_009617.1 PFAM: Extracellular ligand-binding receptor; KEGG: gka:GK2980 branched chain amino acid ABC transporter (substrate-binding protein); extracellular ligand-binding receptor 5937978 5296194 Cbei_5042 Clostridium beijerinckii NCIMB 8052 extracellular ligand-binding receptor YP_001312104.1 5936824 D 290402 CDS YP_001312105.1 150019851 5296195 5938004..5938879 1 NC_009617.1 PFAM: inner-membrane translocator; KEGG: ssa:SSA_1728 ABC transporter membrane-spanning permease-branched chain amino acid transport; inner-membrane translocator 5938879 5296195 Cbei_5043 Clostridium beijerinckii NCIMB 8052 inner-membrane translocator YP_001312105.1 5938004 D 290402 CDS YP_001312106.1 150019852 5296196 5938889..5939854 1 NC_009617.1 PFAM: inner-membrane translocator; KEGG: mta:Moth_2500 inner-membrane translocator; inner-membrane translocator 5939854 5296196 Cbei_5044 Clostridium beijerinckii NCIMB 8052 inner-membrane translocator YP_001312106.1 5938889 D 290402 CDS YP_001312107.1 150019853 5296197 5939859..5940617 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: chy:CHY_2229 high affinity branched-chain amino acid ABC transporter ATP-binding protein; ABC transporter 5940617 5296197 Cbei_5045 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001312107.1 5939859 D 290402 CDS YP_001312108.1 150019854 5296198 5940620..5941324 1 NC_009617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: swo:Swol_2552 branched-chain amino acid ABC transporter (ATP-binding protein); ABC transporter 5941324 5296198 Cbei_5046 Clostridium beijerinckii NCIMB 8052 ABC transporter YP_001312108.1 5940620 D 290402 CDS YP_001312109.1 150019855 5296199 complement(5941334..5941663) 1 NC_009617.1 hypothetical protein 5941663 5296199 Cbei_5047 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312109.1 5941334 R 290402 CDS YP_001312110.1 150019856 5296200 complement(5941746..5941952) 1 NC_009617.1 hypothetical protein 5941952 5296200 Cbei_5048 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312110.1 5941746 R 290402 CDS YP_001312111.1 150019857 5296201 5942340..5942489 1 NC_009617.1 KEGG: cpf:CPF_1306 hypothetical protein; hypothetical protein 5942489 5296201 Cbei_5049 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312111.1 5942340 D 290402 CDS YP_001312112.1 150019858 5296202 5942756..5944891 1 NC_009617.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 5944891 hppA 5296202 hppA Clostridium beijerinckii NCIMB 8052 membrane-bound proton-translocating pyrophosphatase YP_001312112.1 5942756 D 290402 CDS YP_001312113.1 150019859 5296203 5945134..5945553 1 NC_009617.1 PFAM: Protein of unknown function CGGC region; KEGG: mmp:MMP0536 hypothetical protein; hypothetical protein 5945553 5296203 Cbei_5051 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312113.1 5945134 D 290402 CDS YP_001312114.1 150019860 5296204 complement(5945595..5946485) 1 NC_009617.1 KEGG: cth:Cthe_1430 hypothetical protein; hypothetical protein 5946485 5296204 Cbei_5052 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312114.1 5945595 R 290402 CDS YP_001312115.1 150019861 5296205 5946695..5947108 1 NC_009617.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: ctc:CTC00575 conserved protein (RRF2 family protein); BadM/Rrf2 family transcriptional regulator 5947108 5296205 Cbei_5053 Clostridium beijerinckii NCIMB 8052 BadM/Rrf2 family transcriptional regulator YP_001312115.1 5946695 D 290402 CDS YP_001312116.1 150019862 5296206 5947221..5949095 1 NC_009617.1 TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane; KEGG: cac:CAC0116 carbone-monoxide dehydrogenase, beta chain; carbon-monoxide dehydrogenase, catalytic subunit 5949095 5296206 Cbei_5054 Clostridium beijerinckii NCIMB 8052 carbon-monoxide dehydrogenase, catalytic subunit YP_001312116.1 5947221 D 290402 CDS YP_001312117.1 150019863 5296207 complement(5949355..5950554) 1 NC_009617.1 PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: ctc:CTC01386 flavoprotein; beta-lactamase domain-containing protein 5950554 5296207 Cbei_5055 Clostridium beijerinckii NCIMB 8052 beta-lactamase domain-containing protein YP_001312117.1 5949355 R 290402 CDS YP_001312118.1 150019864 5296208 complement(5950597..5952501) 1 NC_009617.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; Electron transfer flavoprotein, alpha subunit-like; KEGG: ctc:CTC01387 acyl-coA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 5952501 5296208 Cbei_5056 Clostridium beijerinckii NCIMB 8052 acyl-CoA dehydrogenase domain-containing protein YP_001312118.1 5950597 R 290402 CDS YP_001312119.1 150019865 5296209 complement(5952950..5953429) 1 NC_009617.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 5953429 5296209 Cbei_5057 Clostridium beijerinckii NCIMB 8052 rRNA large subunit methyltransferase YP_001312119.1 5952950 R 290402 CDS YP_001312120.1 150019866 5296210 complement(5953589..5955016) 1 NC_009617.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC3668 MDR-type permease; EmrB/QacA family drug resistance transporter 5955016 5296210 Cbei_5058 Clostridium beijerinckii NCIMB 8052 EmrB/QacA family drug resistance transporter YP_001312120.1 5953589 R 290402 CDS YP_001312121.1 150019867 5296211 complement(5955509..5957683) 1 NC_009617.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: maq:Maqu_2916 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5957683 5296211 Cbei_5059 Clostridium beijerinckii NCIMB 8052 methyl-accepting chemotaxis sensory transducer YP_001312121.1 5955509 R 290402 CDS YP_001312122.1 150019868 5296212 complement(5957962..5958465) 1 NC_009617.1 PFAM: SEC-C motif domain protein; KEGG: cpr:CPR_2613 sec-C domain protein; hypothetical protein 5958465 5296212 Cbei_5060 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312122.1 5957962 R 290402 CDS YP_001312123.1 150019869 5296213 complement(5958536..5959327) 1 NC_009617.1 PFAM: beta-lactamase domain protein; KEGG: cpf:CPF_2932 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 5959327 5296213 Cbei_5061 Clostridium beijerinckii NCIMB 8052 beta-lactamase domain-containing protein YP_001312123.1 5958536 R 290402 CDS YP_001312124.1 150019870 5296214 complement(5959354..5960619) 1 NC_009617.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 5960619 5296214 Cbei_5062 Clostridium beijerinckii NCIMB 8052 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001312124.1 5959354 R 290402 CDS YP_001312125.1 150019871 5296215 5961005..5961544 1 NC_009617.1 KEGG: cpe:CPE2607 hypothetical protein; hypothetical protein 5961544 5296215 Cbei_5063 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312125.1 5961005 D 290402 CDS YP_001312126.1 150019872 5296216 5961830..5962306 1 NC_009617.1 KEGG: cpr:CPR_2618 hypothetical protein; hypothetical protein 5962306 5296216 Cbei_5064 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312126.1 5961830 D 290402 CDS YP_001312127.1 150019873 5296217 5962396..5962827 1 NC_009617.1 PFAM: protein of unknown function DUF606; KEGG: cpf:CPF_2936 hypothetical protein; hypothetical protein 5962827 5296217 Cbei_5065 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312127.1 5962396 D 290402 CDS YP_001312128.1 150019874 5296218 5962845..5963660 1 NC_009617.1 PFAM: beta-lactamase domain protein; KEGG: bca:BCE_2277 hypothetical protein; beta-lactamase domain-containing protein 5963660 5296218 Cbei_5066 Clostridium beijerinckii NCIMB 8052 beta-lactamase domain-containing protein YP_001312128.1 5962845 D 290402 CDS YP_001312129.1 150019875 5296219 5963865..5965064 1 NC_009617.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: cpr:CPR_2620 subtilase family protein; peptidase S8/S53 subtilisin kexin sedolisin 5965064 5296219 Cbei_5067 Clostridium beijerinckii NCIMB 8052 peptidase S8/S53 subtilisin kexin sedolisin YP_001312129.1 5963865 D 290402 CDS YP_001312130.1 150019876 5296220 5965373..5966371 1 NC_009617.1 TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: cpr:CPR_2622 DNA replication protein DnaD; primosome subunit DnaD 5966371 5296220 Cbei_5068 Clostridium beijerinckii NCIMB 8052 primosome subunit DnaD YP_001312130.1 5965373 D 290402 CDS YP_001312131.1 150019877 5296221 5966364..5967344 1 NC_009617.1 acts to load the DnaB helicase onto the initiation site during DNA replication; DNA replication protein DnaC 5967344 5296221 Cbei_5069 Clostridium beijerinckii NCIMB 8052 DNA replication protein DnaC YP_001312131.1 5966364 D 290402 CDS YP_001312132.1 150019878 5296477 complement(5968781..5969329) 1 NC_009617.1 KEGG: cpe:CPE2614 hypothetical protein; hypothetical protein 5969329 5296477 Cbei_5070 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312132.1 5968781 R 290402 CDS YP_001312133.1 150019879 5296223 5969563..5970807 1 NC_009617.1 PFAM: HI0933 family protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cpf:CPF_2952 conserved hypothetical protein TIGR00275; hypothetical protein 5970807 5296223 Cbei_5071 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312133.1 5969563 D 290402 CDS YP_001312134.1 150019880 5296224 complement(5970911..5971657) 1 NC_009617.1 PFAM: acyl-ACP thioesterase; KEGG: cno:NT01CX_0907 acyl-acyl carrier protein thioesterase; acyl-ACP thioesterase 5971657 5296224 Cbei_5072 Clostridium beijerinckii NCIMB 8052 acyl-ACP thioesterase YP_001312134.1 5970911 R 290402 CDS YP_001312135.1 150019881 5296225 complement(5971958..5972140) 1 NC_009617.1 KEGG: cpr:CPR_2639 hypothetical protein; hypothetical protein 5972140 5296225 Cbei_5073 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312135.1 5971958 R 290402 CDS YP_001312136.1 150019882 5296226 complement(5972239..5973525) 1 NC_009617.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 5973525 5296226 Cbei_5074 Clostridium beijerinckii NCIMB 8052 adenylosuccinate synthetase YP_001312136.1 5972239 R 290402 CDS YP_001312137.1 150019883 5296227 5973776..5974951 1 NC_009617.1 PFAM: UBA/THIF-type NAD/FAD binding protein; malic protein domain protein; malic protein, NAD-binding; KEGG: chy:CHY_1369 NAD-dependent malic enzyme; malate dehydrogenase 5974951 5296227 Cbei_5075 Clostridium beijerinckii NCIMB 8052 malate dehydrogenase YP_001312137.1 5973776 D 290402 CDS YP_001312138.1 150019884 5296228 5975304..5975837 1 NC_009617.1 KEGG: cpe:CPE1522 hypothetical protein; hypothetical protein 5975837 5296228 Cbei_5076 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312138.1 5975304 D 290402 CDS YP_001312139.1 150019885 5296229 complement(5975900..5976700) 1 NC_009617.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 5976700 5296229 Cbei_5077 Clostridium beijerinckii NCIMB 8052 pyrroline-5-carboxylate reductase YP_001312139.1 5975900 R 290402 CDS YP_001312140.1 150019886 5296230 5976846..5977184 1 NC_009617.1 hypothetical protein 5977184 5296230 Cbei_5078 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312140.1 5976846 D 290402 CDS YP_001312141.1 150019887 5296231 complement(5977291..5978628) 1 NC_009617.1 unwinds double stranded DNA; replicative DNA helicase 5978628 5296231 Cbei_5079 Clostridium beijerinckii NCIMB 8052 replicative DNA helicase YP_001312141.1 5977291 R 290402 CDS YP_001312142.1 150019888 5296232 complement(5978764..5980659) 1 NC_009617.1 TIGRFAM: Sporulation protease LonC; PFAM: magnesium chelatase, ChlI subunit; ATPase AAA, central domain protein; peptidase S16, lon domain protein; SMART: ATPase AAA; KEGG: cpr:CPR_2649 ATP-dependent protease; sporulation protease LonC 5980659 5296232 Cbei_5080 Clostridium beijerinckii NCIMB 8052 sporulation protease LonC YP_001312142.1 5978764 R 290402 CDS YP_001312143.1 150019889 5296233 complement(5980672..5981118) 1 NC_009617.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 5981118 rplI 5296233 rplI Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L9 YP_001312143.1 5980672 R 290402 CDS YP_001312144.1 150019890 5296234 complement(5981122..5983062) 1 NC_009617.1 PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: cpr:CPR_2651 DHH family protein; phosphoesterase domain-containing protein 5983062 5296234 Cbei_5082 Clostridium beijerinckii NCIMB 8052 phosphoesterase domain-containing protein YP_001312144.1 5981122 R 290402 CDS YP_001312145.1 150019891 5296235 complement(5983083..5983403) 1 NC_009617.1 KEGG: cno:NT01CX_0886 hypothetical protein; hypothetical protein 5983403 5296235 Cbei_5083 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312145.1 5983083 R 290402 CDS YP_001312146.1 150019892 5296236 complement(5983581..5983841) 1 NC_009617.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 5983841 rpsR 5296236 rpsR Clostridium beijerinckii NCIMB 8052 30S ribosomal protein S18 YP_001312146.1 5983581 R 290402 CDS YP_001312147.1 150019893 5296237 complement(5983866..5984315) 1 NC_009617.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cac:CAC3723 single strand DNA binding protein, SSB; single-strand binding protein 5984315 5296237 Cbei_5085 Clostridium beijerinckii NCIMB 8052 single-strand binding protein YP_001312147.1 5983866 R 290402 CDS YP_001312148.1 150019894 5296238 complement(5984329..5984616) 1 NC_009617.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 5984616 rpsF 5296238 rpsF Clostridium beijerinckii NCIMB 8052 30S ribosomal protein S6 YP_001312148.1 5984329 R 290402 CDS YP_001312149.1 150019895 5296239 complement(5984718..5984912) 1 NC_009617.1 PFAM: protein of unknown function DUF951; KEGG: cno:NT01CX_0882 hypothetical protein; hypothetical protein 5984912 5296239 Cbei_5087 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312149.1 5984718 R 290402 CDS YP_001312150.1 150019896 5296240 complement(5984912..5985835) 1 NC_009617.1 PFAM: MscS Mechanosensitive ion channel; KEGG: cpf:CPF_2980 mechanosensitive ion channel family protein; mechanosensitive ion channel protein MscS 5985835 5296240 Cbei_5088 Clostridium beijerinckii NCIMB 8052 mechanosensitive ion channel protein MscS YP_001312150.1 5984912 R 290402 CDS YP_001312151.1 150019897 5296241 complement(5985851..5986093) 1 NC_009617.1 KEGG: cpf:CPF_2981 hypothetical protein; hypothetical protein 5986093 5296241 Cbei_5089 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312151.1 5985851 R 290402 CDS YP_001312152.1 150019898 5296242 5986262..5986909 1 NC_009617.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: cno:NT01CX_0881 LysE type translocator; lysine exporter protein LysE/YggA 5986909 5296242 Cbei_5090 Clostridium beijerinckii NCIMB 8052 lysine exporter protein LysE/YggA YP_001312152.1 5986262 D 290402 CDS YP_001312153.1 150019899 5296243 5986925..5988076 1 NC_009617.1 TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase, class V; KEGG: cpf:CPF_2983 cysteine desulfurase family protein; cysteine desulfurase 5988076 5296243 Cbei_5091 Clostridium beijerinckii NCIMB 8052 cysteine desulfurase YP_001312153.1 5986925 D 290402 CDS YP_001312154.1 150019900 5296244 5988243..5988830 1 NC_009617.1 PFAM: protein of unknown function DUF1256; KEGG: cpr:CPR_2663 sporulation protein YyaC; hypothetical protein 5988830 5296244 Cbei_5092 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312154.1 5988243 D 290402 CDS YP_001312155.1 150019901 5296245 complement(5990555..5991058) 1 NC_009617.1 KEGG: cpf:CPF_2986 hypothetical protein; hypothetical protein 5991058 5296245 Cbei_5093 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312155.1 5990555 R 290402 CDS YP_001312156.1 150019902 5296246 complement(5991104..5991964) 1 NC_009617.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: cno:NT01CX_0878 stage 0 sporulation protein J; parB-like partition protein 5991964 5296246 Cbei_5094 Clostridium beijerinckii NCIMB 8052 parB-like partition protein YP_001312156.1 5991104 R 290402 CDS YP_001312157.1 150019903 5296247 complement(5991973..5992734) 1 NC_009617.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: cpr:CPR_2666 sporulation initiation inhibitor protein soj; cobyrinic acid a,c-diamide synthase 5992734 5296247 Cbei_5095 Clostridium beijerinckii NCIMB 8052 cobyrinic acid a,c-diamide synthase YP_001312157.1 5991973 R 290402 CDS YP_001312158.1 150019904 5296248 complement(5993079..5993861) 1 NC_009617.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: cno:NT01CX_0876 spoOJ protein; parB-like partition protein 5993861 5296248 Cbei_5096 Clostridium beijerinckii NCIMB 8052 parB-like partition protein YP_001312158.1 5993079 R 290402 CDS YP_001312159.1 150019905 5296249 complement(5993999..5994718) 1 NC_009617.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 5994718 gidB 5296249 gidB Clostridium beijerinckii NCIMB 8052 16S rRNA methyltransferase GidB YP_001312159.1 5993999 R 290402 CDS YP_001312160.1 150019906 5296250 complement(5994742..5996622) 1 NC_009617.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 5996622 5296250 Cbei_5098 Clostridium beijerinckii NCIMB 8052 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_001312160.1 5994742 R 290402 CDS YP_001312161.1 150019907 5296251 complement(5996632..5998020) 1 NC_009617.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 5998020 trmE 5296251 trmE Clostridium beijerinckii NCIMB 8052 tRNA modification GTPase TrmE YP_001312161.1 5996632 R 290402 CDS YP_001312162.1 150019908 5296252 complement(5998201..5998827) 1 NC_009617.1 PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: cpe:CPE2656 SpoIIIJ-associated protein; single-stranded nucleic acid binding R3H domain-containing protein 5998827 5296252 Cbei_5100 Clostridium beijerinckii NCIMB 8052 single-stranded nucleic acid binding R3H domain-containing protein YP_001312162.1 5998201 R 290402 CDS YP_001312163.1 150019909 5296253 complement(5998873..5999637) 1 NC_009617.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 5999637 5296253 Cbei_5101 Clostridium beijerinckii NCIMB 8052 inner membrane protein translocase component YidC YP_001312163.1 5998873 R 290402 CDS YP_001312164.1 150019910 5296254 complement(5999661..5999870) 1 NC_009617.1 PFAM: protein of unknown function DUF37; KEGG: cpr:CPR_2672 conserved hypothetical protein TIGR00278; hypothetical protein 5999870 5296254 Cbei_5102 Clostridium beijerinckii NCIMB 8052 hypothetical protein YP_001312164.1 5999661 R 290402 CDS YP_001312165.1 150019911 5296255 complement(5999842..6000219) 1 NC_009617.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 6000219 rnpA 5296255 rnpA Clostridium beijerinckii NCIMB 8052 ribonuclease P YP_001312165.1 5999842 R 290402 CDS YP_001312166.1 150019912 5296256 complement(6000279..6000413) 1 NC_009617.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 6000413 rpmH 5296256 rpmH Clostridium beijerinckii NCIMB 8052 50S ribosomal protein L34 YP_001312166.1 6000279 R 290402 CDS