-- dump date 20140619_042712 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 290402000001 SEQ_END SEQ_END NC_009617.1 6000632 6000632 DR NC_009617.1; contig end 6000632..6000632 Clostridium beijerinckii NCIMB 8052 YP_001307147.1 CDS dnaA NC_009617.1 280 1629 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 280..1629 Clostridium beijerinckii NCIMB 8052 5291235 YP_001307148.1 CDS Cbei_0002 NC_009617.1 1891 2991 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 1891..2991 Clostridium beijerinckii NCIMB 8052 5291236 YP_001307149.1 CDS Cbei_0003 NC_009617.1 3022 3234 D TIGRFAM: S4 region, YaaA; PFAM: RNA-binding S4 domain protein; KEGG: cpr:CPR_0003 S4 domain protein; S4 region, YaaA 3022..3234 Clostridium beijerinckii NCIMB 8052 5291237 YP_001307150.1 CDS recF NC_009617.1 3283 4386 D Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 3283..4386 Clostridium beijerinckii NCIMB 8052 5291238 YP_001307151.1 CDS Cbei_0005 NC_009617.1 4386 4646 D KEGG: cpr:CPR_0005 hypothetical protein; hypothetical protein 4386..4646 Clostridium beijerinckii NCIMB 8052 5291239 YP_001307152.1 CDS gyrB NC_009617.1 4701 6608 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 4701..6608 Clostridium beijerinckii NCIMB 8052 5291240 YP_001307153.1 CDS Cbei_0007 NC_009617.1 6632 9118 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 6632..9118 Clostridium beijerinckii NCIMB 8052 5291241 YP_001307154.1 CDS Cbei_0008 NC_009617.1 14767 15282 D KEGG: cno:NT01CX_0854 hypothetical protein; metal dependent phosphohydrolase 14767..15282 Clostridium beijerinckii NCIMB 8052 5296261 YP_001307155.1 CDS Cbei_0009 NC_009617.1 15297 15818 D PFAM: 3H domain protein; Helix-turn-helix, type 11 domain protein; KEGG: cac:CAC0009 uncharacterized conserved protein, ortholog of YrxA B.subtilis; 3H domain-containing protein 15297..15818 Clostridium beijerinckii NCIMB 8052 5291243 YP_001307156.1 CDS Cbei_0010 NC_009617.1 15821 17206 D PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: cpr:CPR_0012 BFD-like 2Fe-2S binding domain protein; FAD dependent oxidoreductase 15821..17206 Clostridium beijerinckii NCIMB 8052 5291244 YP_001307157.1 CDS Cbei_0011 NC_009617.1 17223 17450 D PFAM: protein of unknown function DUF1667; KEGG: cpr:CPR_0013 hypothetical protein; hypothetical protein 17223..17450 Clostridium beijerinckii NCIMB 8052 5291245 YP_001307158.1 CDS Cbei_0012 NC_009617.1 18350 18865 D PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY1661 hypothetical protein; N-acetyltransferase GCN5 18350..18865 Clostridium beijerinckii NCIMB 8052 5296265 YP_001307159.1 CDS Cbei_0013 NC_009617.1 18862 22341 D TIGRFAM: ATP-dependent nuclease subunit AddB; KEGG: cpe:CPE0020 ATP-dependent deoxyribonuclease chain B; ATP-dependent nuclease subunit AddB 18862..22341 Clostridium beijerinckii NCIMB 8052 5291247 YP_001307160.1 CDS Cbei_0014 NC_009617.1 22434 26171 D TIGRFAM: Recombination helicase AddA; PFAM: UvrD/REP helicase; KEGG: cpf:CPF_0025 ATP-dependent nuclease, subunit A; recombination helicase AddA 22434..26171 Clostridium beijerinckii NCIMB 8052 5291248 YP_001307161.1 CDS Cbei_0015 NC_009617.1 26242 27423 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: cpf:CPF_0028 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(26242..27423) Clostridium beijerinckii NCIMB 8052 5291249 YP_001307162.1 CDS Cbei_0016 NC_009617.1 27639 28121 D hypothetical protein 27639..28121 Clostridium beijerinckii NCIMB 8052 5291250 YP_001307163.1 CDS Cbei_0017 NC_009617.1 28292 29239 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cno:NT01CX_0224 sensory transduction histidine kinase; histidine kinase 28292..29239 Clostridium beijerinckii NCIMB 8052 5291251 YP_001307164.1 CDS Cbei_0018 NC_009617.1 29536 30426 R catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase complement(29536..30426) Clostridium beijerinckii NCIMB 8052 5296266 YP_001307165.1 CDS Cbei_0019 NC_009617.1 30808 31392 D PFAM: regulatory protein, TetR; KEGG: ctc:CTC00079 transcriptional regulator, TetR family; TetR family transcriptional regulator 30808..31392 Clostridium beijerinckii NCIMB 8052 5291253 YP_001307166.1 CDS Cbei_0020 NC_009617.1 31554 32342 D TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: cpf:CPF_1058 Cof-like hydrolase; HAD family hydrolase 31554..32342 Clostridium beijerinckii NCIMB 8052 5291254 YP_001307167.1 CDS Cbei_0021 NC_009617.1 32490 34085 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_1757 ABC transporter ATP-binding protein; ABC transporter complement(32490..34085) Clostridium beijerinckii NCIMB 8052 5291255 YP_001307168.1 CDS Cbei_0022 NC_009617.1 34318 34911 R PFAM: Domain of unknown function DUF1836; KEGG: cpf:CPF_1724 hypothetical protein; hypothetical protein complement(34318..34911) Clostridium beijerinckii NCIMB 8052 5291256 YP_001307169.1 CDS Cbei_0023 NC_009617.1 35133 35780 D TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: bca:BCE_5590 channel protein, hemolysin III family; hemolysin III family channel protein 35133..35780 Clostridium beijerinckii NCIMB 8052 5291257 YP_001307170.1 CDS Cbei_0024 NC_009617.1 36010 36813 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 36010..36813 Clostridium beijerinckii NCIMB 8052 5291258 YP_001307171.1 CDS proA NC_009617.1 36839 38083 D Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 36839..38083 Clostridium beijerinckii NCIMB 8052 5291259 YP_001307172.1 CDS Cbei_0026 NC_009617.1 38358 38717 D TIGRFAM: methylglyoxal synthase; PFAM: MGS domain protein; KEGG: oih:OB1767 methylglyoxal synthase; methylglyoxal synthase 38358..38717 Clostridium beijerinckii NCIMB 8052 5291260 YP_001307173.1 CDS Cbei_0027 NC_009617.1 38976 39755 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cno:NT01CX_0219 probable short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 38976..39755 Clostridium beijerinckii NCIMB 8052 5291261 YP_001307174.1 CDS Cbei_0028 NC_009617.1 40396 41445 D catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 40396..41445 Clostridium beijerinckii NCIMB 8052 5291262 YP_001307175.1 CDS carB NC_009617.1 41460 44669 D four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 41460..44669 Clostridium beijerinckii NCIMB 8052 5291263 YP_001307176.1 CDS Cbei_0030 NC_009617.1 44864 45097 D hypothetical protein 44864..45097 Clostridium beijerinckii NCIMB 8052 5291264 YP_001307177.1 CDS Cbei_0031 NC_009617.1 45219 46328 R PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cac:CAC0277 HD-GYP hydrolase domain containing protein; metal dependent phosphohydrolase complement(45219..46328) Clostridium beijerinckii NCIMB 8052 5291265 YP_001307178.1 CDS Cbei_0032 NC_009617.1 46730 47584 D converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 46730..47584 Clostridium beijerinckii NCIMB 8052 5291266 YP_001307179.1 CDS Cbei_0033 NC_009617.1 47690 48214 D PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: cno:NT01CX_0653 peptidyl-prolyl cis-trans isomerase; peptidyl-prolyl isomerase 47690..48214 Clostridium beijerinckii NCIMB 8052 5291267 YP_001307180.1 CDS Cbei_0034 NC_009617.1 48267 48638 D KEGG: cpe:CPE2565 hypothetical protein; hypothetical protein 48267..48638 Clostridium beijerinckii NCIMB 8052 5291268 YP_001307181.1 CDS Cbei_0035 NC_009617.1 48640 49308 D PFAM: helix-turn-helix domain protein; KEGG: cpe:CPE2564 hypothetical protein; helix-turn-helix domain-containing protein 48640..49308 Clostridium beijerinckii NCIMB 8052 5291269 YP_001307182.1 CDS Cbei_0036 NC_009617.1 49461 52646 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; Peptidoglycan-binding domain 1 protein; KEGG: cac:CAC3245 subtilisin like protease (two fused domains); peptidoglycan binding domain-containing protein 49461..52646 Clostridium beijerinckii NCIMB 8052 5291270 YP_001307183.1 CDS Cbei_0037 NC_009617.1 52779 53747 R PFAM: Radical SAM domain protein; KEGG: cpf:CPF_1251 radical SAM domain protein; radical SAM domain-containing protein complement(52779..53747) Clostridium beijerinckii NCIMB 8052 5291271 YP_001307184.1 CDS Cbei_0038 NC_009617.1 53805 54881 R KEGG: cpf:CPF_2884 hypothetical protein; hypothetical protein complement(53805..54881) Clostridium beijerinckii NCIMB 8052 5291272 YP_001307185.1 CDS Cbei_0039 NC_009617.1 55000 55929 D TIGRFAM: conserved hypothetical radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cno:NT01CX_1004 radical SAM protein, TIGR01212 family; radical SAM protein 55000..55929 Clostridium beijerinckii NCIMB 8052 5291273 YP_001307186.1 CDS Cbei_0040 NC_009617.1 55970 56686 D catalyzes the formation of (2R)-3-sulfolactate from (2R)-2-phospho-3-sulfolactate; 2-phosphosulfolactate phosphatase 55970..56686 Clostridium beijerinckii NCIMB 8052 5291274 YP_001307187.1 CDS Cbei_0041 NC_009617.1 56788 57006 R PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: cac:CAC0669 hypothetical protein; BFD/(2Fe-2S)-binding domain-containing protein complement(56788..57006) Clostridium beijerinckii NCIMB 8052 5291275 YP_001307188.1 CDS Cbei_0042 NC_009617.1 57280 57963 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cpf:CPF_1139 DNA-binding response regulator; two component transcriptional regulator 57280..57963 Clostridium beijerinckii NCIMB 8052 5291276 YP_001307189.1 CDS Cbei_0043 NC_009617.1 57967 59316 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cpf:CPF_1140 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 57967..59316 Clostridium beijerinckii NCIMB 8052 5291277 YP_001307190.1 CDS Cbei_0044 NC_009617.1 59470 59835 R KEGG: dsy:DSY2272 hypothetical protein; hypothetical protein complement(59470..59835) Clostridium beijerinckii NCIMB 8052 5291278 YP_001307191.1 CDS Cbei_0045 NC_009617.1 59841 60143 R KEGG: dsy:DSY2271 hypothetical protein; hypothetical protein complement(59841..60143) Clostridium beijerinckii NCIMB 8052 5291279 YP_001307192.1 CDS ileS NC_009617.1 60737 63850 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase 60737..63850 Clostridium beijerinckii NCIMB 8052 5291280 YP_001307193.1 CDS Cbei_0047 NC_009617.1 64112 65110 D PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: cpr:CPR_2548 catabolite control protein A; alanine racemase 64112..65110 Clostridium beijerinckii NCIMB 8052 5291281 YP_001307194.1 CDS Cbei_0048 NC_009617.1 65349 65792 D PFAM: regulatory protein, MarR; transcriptional regulator TrmB; KEGG: dsy:DSY1453 hypothetical protein; transcriptional regulator TrmB 65349..65792 Clostridium beijerinckii NCIMB 8052 5291282 YP_001307195.1 CDS Cbei_0049 NC_009617.1 65785 67158 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cno:NT01CX_1214 MATE efflux family protein; MATE efflux family protein 65785..67158 Clostridium beijerinckii NCIMB 8052 5291283 YP_001307196.1 CDS Cbei_0050 NC_009617.1 67214 67399 R KEGG: cpf:CPF_2858 hypothetical protein; hypothetical protein complement(67214..67399) Clostridium beijerinckii NCIMB 8052 5291284 YP_001307197.1 CDS Cbei_0051 NC_009617.1 67512 68087 D PFAM: nucleoside recognition domain protein; KEGG: ctc:CTC00238 spore maturation protein A; nucleoside recognition domain-containing protein 67512..68087 Clostridium beijerinckii NCIMB 8052 5291285 YP_001307198.1 CDS Cbei_0052 NC_009617.1 68141 68662 D PFAM: nucleoside recognition domain protein; KEGG: cpf:CPF_2856 spore maturation protein B; nucleoside recognition domain-containing protein 68141..68662 Clostridium beijerinckii NCIMB 8052 5291286 YP_001307199.1 CDS Cbei_0053 NC_009617.1 68779 70023 D PFAM: peptidase M24; peptidase M24B, X-Pro dipeptidase/aminopeptidase domain protein; KEGG: cpr:CPR_2539 xaa-pro aminopeptidase; peptidase M24 68779..70023 Clostridium beijerinckii NCIMB 8052 5291287 YP_001307200.1 CDS Cbei_0054 NC_009617.1 70131 71906 D PFAM: creatinase; peptidase M24; KEGG: cpf:CPF_0866 metallopeptidase, M24 family; peptidase M24 70131..71906 Clostridium beijerinckii NCIMB 8052 5291288 YP_001307201.1 CDS Cbei_0055 NC_009617.1 72579 74516 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 72579..74516 Clostridium beijerinckii NCIMB 8052 5291289 YP_001307202.1 CDS Cbei_0056 NC_009617.1 74848 75660 D TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: cpf:CPF_2843 hydrolase, TatD family; TatD family hydrolase 74848..75660 Clostridium beijerinckii NCIMB 8052 5291290 YP_001307203.1 CDS Cbei_0057 NC_009617.1 75956 77008 D PFAM: protein of unknown function DUF348; 3D domain protein; G5 domain protein; KEGG: cpf:CPF_2842 3D/G5 domain protein; hypothetical protein 75956..77008 Clostridium beijerinckii NCIMB 8052 5291291 YP_001307204.1 CDS Cbei_0058 NC_009617.1 77171 77728 D TIGRFAM: primase/topoisomerase like protein; PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein; KEGG: cpr:CPR_2527 primase-like protein; primase/topoisomerase-like protein 77171..77728 Clostridium beijerinckii NCIMB 8052 5291292 YP_001307205.1 CDS ksgA NC_009617.1 77729 78574 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 77729..78574 Clostridium beijerinckii NCIMB 8052 5291293 YP_001307206.1 CDS Cbei_0060 NC_009617.1 78744 80903 D KEGG: cpe:CPE2516 hypothetical protein; hypothetical protein 78744..80903 Clostridium beijerinckii NCIMB 8052 5291294 YP_001307207.1 CDS Cbei_0061 NC_009617.1 80915 81487 D KEGG: cpe:CPE2515 hypothetical protein; hypothetical protein 80915..81487 Clostridium beijerinckii NCIMB 8052 5291295 YP_001307208.1 CDS Cbei_0062 NC_009617.1 81707 82477 D transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 81707..82477 Clostridium beijerinckii NCIMB 8052 5291296 YP_001307209.1 CDS Cbei_0063 NC_009617.1 82467 83303 D KEGG: cpe:CPE2513 hypothetical protein; hypothetical protein 82467..83303 Clostridium beijerinckii NCIMB 8052 5291297 YP_001307210.1 CDS Cbei_0064 NC_009617.1 83322 84161 D KEGG: cpf:CPF_2835 Mrp/NBP35 ATP-binding family protein; Mrp/NBP35 ATP-binding family protein 83322..84161 Clostridium beijerinckii NCIMB 8052 5291298 YP_001307211.1 CDS Cbei_0065 NC_009617.1 84291 84482 D KEGG: cpr:CPR_2520 ferredoxin; ferredoxin 84291..84482 Clostridium beijerinckii NCIMB 8052 5291299 YP_001307212.1 CDS Cbei_0066 NC_009617.1 84713 85390 R TIGRFAM: proton-coupled thiamine transporter YuaJ; KEGG: cpf:CPF_1622 probable proton-coupled thiamine transporter YuaJ; proton-coupled thiamine transporter YuaJ complement(84713..85390) Clostridium beijerinckii NCIMB 8052 5291300 YP_001307213.1 CDS Cbei_0067 NC_009617.1 85951 86799 R TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: cac:CAC0948 uncharacterized protein, DegV family; degV family protein complement(85951..86799) Clostridium beijerinckii NCIMB 8052 5291301 YP_001307214.1 CDS Cbei_0068 NC_009617.1 87260 89368 D Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 87260..89368 Clostridium beijerinckii NCIMB 8052 5291302 YP_001307215.1 CDS aksA NC_009617.1 89973 91142 D in Methanococcus jannaschii this protein catalyzes the condensation of alpha-ketoglutarate and acetyl-CoA to form trans-homoaconitate; functions in alphaketosuberate synthesis which is a precursor in coenzyme B and biotin synthesis; trans-homoaconitate synthase 89973..91142 Clostridium beijerinckii NCIMB 8052 5291303 YP_001307216.1 CDS Cbei_0070 NC_009617.1 91157 93079 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 91157..93079 Clostridium beijerinckii NCIMB 8052 5291304 YP_001307217.1 CDS Cbei_0071 NC_009617.1 93285 93794 D TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; KEGG: cpf:CPF_2826 anaerobic ribonucleoside-triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein 93285..93794 Clostridium beijerinckii NCIMB 8052 5291305 YP_001307218.1 CDS Cbei_0072 NC_009617.1 93960 94571 D responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 93960..94571 Clostridium beijerinckii NCIMB 8052 5291306 YP_001307219.1 CDS Cbei_0073 NC_009617.1 94951 95916 R PFAM: glycosyl transferase, family 2; KEGG: gka:GK3091 glycosyltransferase; glycosyl transferase family protein complement(94951..95916) Clostridium beijerinckii NCIMB 8052 5291307 YP_001307220.1 CDS Cbei_0074 NC_009617.1 95992 97077 R PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cac:CAC0277 HD-GYP hydrolase domain containing protein; metal dependent phosphohydrolase complement(95992..97077) Clostridium beijerinckii NCIMB 8052 5291308 YP_001307221.1 CDS Cbei_0075 NC_009617.1 97459 98541 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 97459..98541 Clostridium beijerinckii NCIMB 8052 5291309 YP_001307222.1 CDS asnC NC_009617.1 99045 100439 R catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase complement(99045..100439) Clostridium beijerinckii NCIMB 8052 5291310 YP_001307223.1 CDS Cbei_0077 NC_009617.1 100772 101470 R PFAM: metallophosphoesterase; KEGG: cpe:CPE2498 hypothetical protein; metallophosphoesterase complement(100772..101470) Clostridium beijerinckii NCIMB 8052 5291311 YP_001307224.1 CDS murC NC_009617.1 101507 102886 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(101507..102886) Clostridium beijerinckii NCIMB 8052 5291312 YP_001307225.1 CDS Cbei_0079 NC_009617.1 103174 103989 D TIGRFAM: pur operon repressor; PFAM: phosphoribosyltransferase; purine repressor-like; KEGG: cpr:CPR_2501 pur operon repressor; pur operon repressor 103174..103989 Clostridium beijerinckii NCIMB 8052 5291313 YP_001307226.1 CDS Cbei_0080 NC_009617.1 104320 104595 D PFAM: SpoVG family protein; KEGG: cac:CAC3223 stage V sporulation protein G; SpoVG family protein 104320..104595 Clostridium beijerinckii NCIMB 8052 5291314 YP_001307227.1 CDS glmU NC_009617.1 104791 106158 D forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 104791..106158 Clostridium beijerinckii NCIMB 8052 5291315 YP_001307228.1 CDS Cbei_0082 NC_009617.1 106206 107171 D TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; KEGG: cpf:CPF_2812 ribose-phosphate pyrophosphokinase; ribose-phosphate pyrophosphokinase 106206..107171 Clostridium beijerinckii NCIMB 8052 5291316 YP_001307229.1 CDS Cbei_0083 NC_009617.1 107490 108176 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ctc:CTC00189 transcriptional regulatory protein; two component transcriptional regulator 107490..108176 Clostridium beijerinckii NCIMB 8052 5291317 YP_001307230.1 CDS Cbei_0084 NC_009617.1 108177 109598 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cno:NT01CX_1017 sensory transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 108177..109598 Clostridium beijerinckii NCIMB 8052 5291318 YP_001307231.1 CDS Cbei_0085 NC_009617.1 109621 110196 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 109621..110196 Clostridium beijerinckii NCIMB 8052 5291319 YP_001307232.1 CDS Cbei_0086 NC_009617.1 110211 113711 D TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cpr:CPR_2493 transcription-repair coupling factor; transcription-repair coupling factor 110211..113711 Clostridium beijerinckii NCIMB 8052 5291320 YP_001307233.1 CDS prsA NC_009617.1 113945 115033 D cis/trans isomerase of peptidylprolyl; PPIase; membrane-bound lipoprotein; peptidyl-prolyl isomerase 113945..115033 Clostridium beijerinckii NCIMB 8052 5291321 YP_001307234.1 CDS Cbei_0088 NC_009617.1 115288 115836 D TIGRFAM: transcriptional regulator, AbrB family; Sporulation stage V, protein T; PFAM: SpoVT/AbrB domain protein; KEGG: cpe:CPE2482 stage V sprulation protein T; AbrB family transcriptional regulator 115288..115836 Clostridium beijerinckii NCIMB 8052 5291322 YP_001307235.1 CDS Cbei_0089 NC_009617.1 115932 117467 D PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: ctc:CTC00197 stage V sporulation protein B; polysaccharide biosynthesis protein 115932..117467 Clostridium beijerinckii NCIMB 8052 5291323 YP_001307236.1 CDS Cbei_0090 NC_009617.1 117485 118936 D TIGRFAM: MazG family protein; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; MazG nucleotide pyrophosphohydrolase; KEGG: cpr:CPR_2489 MazG family protein; MazG family protein 117485..118936 Clostridium beijerinckii NCIMB 8052 5291324 YP_001307237.1 CDS Cbei_0091 NC_009617.1 119157 119432 D PFAM: histone family protein DNA-binding protein; KEGG: cac:CAC3211 DNA binding protein HU; histone family protein DNA-binding protein 119157..119432 Clostridium beijerinckii NCIMB 8052 5291325 YP_001307238.1 CDS Cbei_0092 NC_009617.1 119503 119763 D PFAM: RNA-binding S4 domain protein; KEGG: cpf:CPF_2801 S4 domain protein; RNA-binding S4 domain-containing protein 119503..119763 Clostridium beijerinckii NCIMB 8052 5291326 YP_001307239.1 CDS Cbei_0093 NC_009617.1 119967 120260 D PFAM: YabP family protein; KEGG: cno:NT01CX_1027 hypothetical protein; YabP family protein 119967..120260 Clostridium beijerinckii NCIMB 8052 5291327 YP_001307240.1 CDS Cbei_0094 NC_009617.1 120270 120662 D TIGRFAM: Spore cortex biosynthesis protein YabQ; KEGG: cpf:CPF_2799 spore cortex biosynthesis protein YabQ; spore cortex biosynthesis protein YabQ 120270..120662 Clostridium beijerinckii NCIMB 8052 5291328 YP_001307241.1 CDS Cbei_0095 NC_009617.1 120740 121027 D PFAM: Septum formation initiator; KEGG: cpf:CPF_2798 cell division protein FtsL; septum formation initiator 120740..121027 Clostridium beijerinckii NCIMB 8052 5291329 YP_001307242.1 CDS Cbei_0096 NC_009617.1 121177 121587 D PFAM: RNA binding S1 domain protein; KEGG: cpr:CPR_2483 RNA-binding protein; hypothetical protein 121177..121587 Clostridium beijerinckii NCIMB 8052 5291330 YP_001307243.1 CDS Cbei_0097 NC_009617.1 123521 125932 D KEGG: cpf:CPF_2789 stage II sporulation protein E; TIGRFAM: Sporulation stage II, protein E; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; sporulation stage II, protein E 123521..125932 Clostridium beijerinckii NCIMB 8052 5296276 YP_001307244.1 CDS Cbei_0098 NC_009617.1 126199 127605 D TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: cno:NT01CX_1038 cell cycle protein MesJ; tRNA(Ile)-lysidine synthetase 126199..127605 Clostridium beijerinckii NCIMB 8052 5291332 YP_001307245.1 CDS Cbei_0099 NC_009617.1 127608 128147 D TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: cpe:CPE2471 hypoxanthine-guanine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 127608..128147 Clostridium beijerinckii NCIMB 8052 5291333 YP_001307246.1 CDS Cbei_0100 NC_009617.1 128222 130030 D KEGG: ctc:CTC00205 cell division protein ftsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; ATP-dependent metalloprotease FtsH 128222..130030 Clostridium beijerinckii NCIMB 8052 5291334 YP_001307247.1 CDS Cbei_0101 NC_009617.1 130234 131904 D catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase 130234..131904 Clostridium beijerinckii NCIMB 8052 5291335 YP_001307248.1 CDS Cbei_0102 NC_009617.1 132096 132896 D type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 132096..132896 Clostridium beijerinckii NCIMB 8052 5291336 YP_001307249.1 CDS Cbei_0103 NC_009617.1 132946 133911 D TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase, DuS; dihydroorotate dehydrogenase; KEGG: cpr:CPR_2469 dihydrouridine synthase; nifR3 family TIM-barrel protein 132946..133911 Clostridium beijerinckii NCIMB 8052 5291337 YP_001307250.1 CDS greA NC_009617.1 134393 134875 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 134393..134875 Clostridium beijerinckii NCIMB 8052 5291338 YP_001307251.1 CDS lysS NC_009617.1 134890 136395 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 134890..136395 Clostridium beijerinckii NCIMB 8052 5291339 YP_001307252.1 CDS Cbei_0106 NC_009617.1 137905 139296 D Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase 137905..139296 Clostridium beijerinckii NCIMB 8052 5296279 YP_001307253.1 CDS murD NC_009617.1 139445 140821 D UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 139445..140821 Clostridium beijerinckii NCIMB 8052 5291341 YP_001307254.1 CDS Cbei_0108 NC_009617.1 140884 141906 R KEGG: cac:CAC3039 hypothetical secreted protein; hypothetical protein complement(140884..141906) Clostridium beijerinckii NCIMB 8052 5291342 YP_001307255.1 CDS Cbei_0109 NC_009617.1 148303 149700 D TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: lbr:LVIS_0186 D-xylose proton-symporter; sugar transporter 148303..149700 Clostridium beijerinckii NCIMB 8052 5296286 YP_001307256.1 CDS Cbei_0110 NC_009617.1 149740 150687 R PFAM: Mg2+ transporter protein, CorA family protein; KEGG: cpr:CPR_2452 magnesium and cobalt transporter; Mg2+ transporter protein, CorA family protein complement(149740..150687) Clostridium beijerinckii NCIMB 8052 5291344 YP_001307257.1 CDS Cbei_0111 NC_009617.1 150965 152125 R KEGG: cpf:CPF_2765 amidohydrolase-like protein; amidohydrolase complement(150965..152125) Clostridium beijerinckii NCIMB 8052 5291345 YP_001307258.1 CDS Cbei_0112 NC_009617.1 152532 152714 D hypothetical protein 152532..152714 Clostridium beijerinckii NCIMB 8052 5291346 YP_001307259.1 CDS Cbei_0113 NC_009617.1 152764 153405 D PFAM: thymidylate kinase; KEGG: cno:NT01CX_0761 thymidylate kinase; dTMP kinase 152764..153405 Clostridium beijerinckii NCIMB 8052 5291347 YP_001307260.1 CDS Cbei_0114 NC_009617.1 153479 153811 D PFAM: protein of unknown function DUF970; KEGG: cac:CAC0299 protein from nitrogen regulatory protein P-II (GlnB) family, ortholog YAAQ B.subtilis; hypothetical protein 153479..153811 Clostridium beijerinckii NCIMB 8052 5291348 YP_001307261.1 CDS Cbei_0115 NC_009617.1 153831 154763 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 153831..154763 Clostridium beijerinckii NCIMB 8052 5291349 YP_001307262.1 CDS Cbei_0116 NC_009617.1 154767 155672 D PFAM: PSP1 domain protein; KEGG: cpr:CPR_2443 PSP1 domain protein; PSP1 domain-containing protein 154767..155672 Clostridium beijerinckii NCIMB 8052 5291350 YP_001307263.1 CDS Cbei_0117 NC_009617.1 155684 155887 D KEGG: cac:CAC0302 predicted metal-binding protein of ferredoxin fold; metal-binding protein of ferredoxin fold 155684..155887 Clostridium beijerinckii NCIMB 8052 5291351 YP_001307264.1 CDS Cbei_0118 NC_009617.1 156010 156180 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cpr:CPR_2442 ferredoxin (FdxA); 4Fe-4S ferredoxin 156010..156180 Clostridium beijerinckii NCIMB 8052 5291352 YP_001307265.1 CDS Cbei_0119 NC_009617.1 156237 156887 R KEGG: cac:CAC0482 Zn-dependent hydrolase of the metallo-beta-lactamase superfamily; zinc-dependent hydrolase complement(156237..156887) Clostridium beijerinckii NCIMB 8052 5291353 YP_001307266.1 CDS Cbei_0120 NC_009617.1 157057 157512 D PFAM: Firmicute transcriptional repressor of class III stress genes; KEGG: cpf:CPF_2754 transcriptional repressor; transcriptional repressor CtsR 157057..157512 Clostridium beijerinckii NCIMB 8052 5291354 YP_001307267.1 CDS Cbei_0121 NC_009617.1 157527 158105 D PFAM: UvrB/UvrC protein; KEGG: cac:CAC3191 uncharacterized conserved protein, containing ClpE-like Zn-zinger domain; YACH B.subtilis ortholog; UvrB/UvrC protein 157527..158105 Clostridium beijerinckii NCIMB 8052 5291355 YP_001307268.1 CDS Cbei_0122 NC_009617.1 158098 159111 D PFAM: ATP:guanido phosphotransferase; KEGG: cac:CAC3190 arginine kinase related enzyme, YACI B.subtilis ortholog; ATP:guanido phosphotransferase 158098..159111 Clostridium beijerinckii NCIMB 8052 5291356 YP_001307269.1 CDS Cbei_0123 NC_009617.1 159137 161611 D PFAM: UvrB/UvrC protein; ATPase AAA, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: ATPase AAA; KEGG: ctc:CTC02633 negative regulator of genetic competence mecB/clpC; ATPase 159137..161611 Clostridium beijerinckii NCIMB 8052 5291357 YP_001307270.1 CDS Cbei_0124 NC_009617.1 161742 162677 D TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; HI0933 family protein; KEGG: cpr:CPR_2436 thioredoxin-disulfide reductase; thioredoxin reductase 161742..162677 Clostridium beijerinckii NCIMB 8052 5291358 YP_001307271.1 CDS Cbei_0125 NC_009617.1 162753 162980 R TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin; KEGG: cpr:CPR_2433 glutaredoxin; YruB family glutaredoxin-like protein complement(162753..162980) Clostridium beijerinckii NCIMB 8052 5291359 YP_001307272.1 CDS Cbei_0126 NC_009617.1 163466 164842 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 163466..164842 Clostridium beijerinckii NCIMB 8052 5291360 YP_001307273.1 CDS Cbei_0127 NC_009617.1 165081 166145 D non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair; DNA integrity scanning protein DisA 165081..166145 Clostridium beijerinckii NCIMB 8052 5291361 YP_001307274.1 CDS Cbei_0128 NC_009617.1 166388 167488 D PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein, PINc; KEGG: cpr:CPR_2427 PIN/TRAM domain protein; PilT domain-containing protein 166388..167488 Clostridium beijerinckii NCIMB 8052 5291362 YP_001307275.1 CDS ispD NC_009617.1 167510 168190 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 167510..168190 Clostridium beijerinckii NCIMB 8052 5291363 YP_001307276.1 CDS Cbei_0130 NC_009617.1 168583 170295 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 168583..170295 Clostridium beijerinckii NCIMB 8052 5291364 YP_001307277.1 CDS cysS NC_009617.1 170313 171713 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 170313..171713 Clostridium beijerinckii NCIMB 8052 5291365 YP_001307278.1 CDS Cbei_0132 NC_009617.1 171763 172176 D PFAM: ribonuclease III; KEGG: cpe:CPE2426 hypothetical protein; ribonuclease III 171763..172176 Clostridium beijerinckii NCIMB 8052 5291366 YP_001307279.1 CDS Cbei_0133 NC_009617.1 172207 173109 D TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; KEGG: cpr:CPR_2420 RNA methyltransferase, TrmH family, group 3; RNA methyltransferase 172207..173109 Clostridium beijerinckii NCIMB 8052 5291367 YP_001307280.1 CDS Cbei_0134 NC_009617.1 173123 173635 D PFAM: protein of unknown function DUF901; KEGG: cpr:CPR_2419 hypothetical protein; hypothetical protein 173123..173635 Clostridium beijerinckii NCIMB 8052 5291368 YP_001307281.1 CDS Cbei_0135 NC_009617.1 173671 174342 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 173671..174342 Clostridium beijerinckii NCIMB 8052 5291369 YP_001307282.1 CDS Cbei_0136 NC_009617.1 174560 175753 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 174560..175753 Clostridium beijerinckii NCIMB 8052 5296287 YP_001307283.1 CDS rpmG NC_009617.1 175931 176080 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 175931..176080 Clostridium beijerinckii NCIMB 8052 5291371 YP_001307284.1 CDS secE NC_009617.1 176129 176359 D forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 176129..176359 Clostridium beijerinckii NCIMB 8052 5291372 YP_001307285.1 CDS nusG NC_009617.1 176373 176918 D Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 176373..176918 Clostridium beijerinckii NCIMB 8052 5291373 YP_001307286.1 CDS rplK NC_009617.1 176997 177422 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 176997..177422 Clostridium beijerinckii NCIMB 8052 5291374 YP_001307287.1 CDS rplA NC_009617.1 177477 178166 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 177477..178166 Clostridium beijerinckii NCIMB 8052 5291375 YP_001307288.1 CDS rplJ NC_009617.1 178369 178872 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 178369..178872 Clostridium beijerinckii NCIMB 8052 5291376 YP_001307289.1 CDS Cbei_0143 NC_009617.1 178924 179289 D TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12-like; KEGG: cpr:CPR_2409 ribosomal protein L7/L12; 50S ribosomal protein L7/L12 178924..179289 Clostridium beijerinckii NCIMB 8052 5291377 YP_001307290.1 CDS rpoB NC_009617.1 179620 183330 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 179620..183330 Clostridium beijerinckii NCIMB 8052 5291378 YP_001307291.1 CDS Cbei_0145 NC_009617.1 183352 186888 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 183352..186888 Clostridium beijerinckii NCIMB 8052 5291379 YP_001307292.1 CDS rpsL NC_009617.1 187145 187522 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 187145..187522 Clostridium beijerinckii NCIMB 8052 5291380 YP_001307293.1 CDS Cbei_0147 NC_009617.1 187672 188142 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 187672..188142 Clostridium beijerinckii NCIMB 8052 5291381 YP_001307294.1 CDS Cbei_0148 NC_009617.1 188226 190292 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 188226..190292 Clostridium beijerinckii NCIMB 8052 5291382 YP_001307295.1 CDS Cbei_0149 NC_009617.1 190480 191673 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 190480..191673 Clostridium beijerinckii NCIMB 8052 5291383 YP_001307296.1 CDS rpsJ NC_009617.1 192128 192436 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 192128..192436 Clostridium beijerinckii NCIMB 8052 5291384 YP_001307297.1 CDS rplC NC_009617.1 192509 193138 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 192509..193138 Clostridium beijerinckii NCIMB 8052 5291385 YP_001307298.1 CDS rplD NC_009617.1 193165 193785 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 193165..193785 Clostridium beijerinckii NCIMB 8052 5291386 YP_001307299.1 CDS rplW NC_009617.1 193785 194081 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 193785..194081 Clostridium beijerinckii NCIMB 8052 5291387 YP_001307300.1 CDS rplB NC_009617.1 194146 194979 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 194146..194979 Clostridium beijerinckii NCIMB 8052 5291388 YP_001307301.1 CDS rpsS NC_009617.1 195045 195317 D protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 195045..195317 Clostridium beijerinckii NCIMB 8052 5291389 YP_001307302.1 CDS rplV NC_009617.1 195338 195673 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 195338..195673 Clostridium beijerinckii NCIMB 8052 5291390 YP_001307303.1 CDS rpsC NC_009617.1 195698 196363 D forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 195698..196363 Clostridium beijerinckii NCIMB 8052 5291391 YP_001307304.1 CDS rplP NC_009617.1 196381 196815 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 196381..196815 Clostridium beijerinckii NCIMB 8052 5291392 YP_001307305.1 CDS Cbei_0159 NC_009617.1 196815 197027 D one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 196815..197027 Clostridium beijerinckii NCIMB 8052 5291393 YP_001307306.1 CDS rpsQ NC_009617.1 197051 197305 D primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 197051..197305 Clostridium beijerinckii NCIMB 8052 5291394 YP_001307307.1 CDS rplN NC_009617.1 197334 197702 D binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 197334..197702 Clostridium beijerinckii NCIMB 8052 5291395 YP_001307308.1 CDS rplX NC_009617.1 197718 198032 D assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 197718..198032 Clostridium beijerinckii NCIMB 8052 5291396 YP_001307309.1 CDS rplE NC_009617.1 198055 198594 D part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 198055..198594 Clostridium beijerinckii NCIMB 8052 5291397 YP_001307310.1 CDS rpsN NC_009617.1 198611 198796 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 198611..198796 Clostridium beijerinckii NCIMB 8052 5291398 YP_001307311.1 CDS rpsH NC_009617.1 198829 199227 D binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 198829..199227 Clostridium beijerinckii NCIMB 8052 5291399 YP_001307312.1 CDS rplF NC_009617.1 199296 199838 D ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 199296..199838 Clostridium beijerinckii NCIMB 8052 5291400 YP_001307313.1 CDS rplR NC_009617.1 199857 200216 D binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 199857..200216 Clostridium beijerinckii NCIMB 8052 5291401 YP_001307314.1 CDS rpsE NC_009617.1 200237 200734 D located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 200237..200734 Clostridium beijerinckii NCIMB 8052 5291402 YP_001307315.1 CDS rpmD NC_009617.1 200747 200926 D L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 200747..200926 Clostridium beijerinckii NCIMB 8052 5291403 YP_001307316.1 CDS rplO NC_009617.1 200948 201388 D late assembly protein; 50S ribosomal protein L15 200948..201388 Clostridium beijerinckii NCIMB 8052 5291404 YP_001307317.1 CDS secY NC_009617.1 201390 202688 D forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 201390..202688 Clostridium beijerinckii NCIMB 8052 5291405 YP_001307318.1 CDS adk NC_009617.1 202714 203364 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 202714..203364 Clostridium beijerinckii NCIMB 8052 5291406 YP_001307319.1 CDS Cbei_0173 NC_009617.1 203364 204113 D TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: cpr:CPR_2377 methionine aminopeptidase, type I; methionine aminopeptidase 203364..204113 Clostridium beijerinckii NCIMB 8052 5291407 YP_001307320.1 CDS Cbei_0174 NC_009617.1 204201 204482 D KEGG: cpf:CPF_2691 hypothetical protein; hypothetical protein 204201..204482 Clostridium beijerinckii NCIMB 8052 5291408 YP_001307321.1 CDS infA NC_009617.1 204490 204708 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 204490..204708 Clostridium beijerinckii NCIMB 8052 5291409 YP_001307322.1 CDS rpmJ NC_009617.1 204763 204876 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 204763..204876 Clostridium beijerinckii NCIMB 8052 5291410 YP_001307323.1 CDS rpsM NC_009617.1 205100 205468 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 205100..205468 Clostridium beijerinckii NCIMB 8052 5291411 YP_001307324.1 CDS Cbei_0178 NC_009617.1 205484 205879 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 205484..205879 Clostridium beijerinckii NCIMB 8052 5291412 YP_001307325.1 CDS rpsD NC_009617.1 205910 206530 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 205910..206530 Clostridium beijerinckii NCIMB 8052 5291413 YP_001307326.1 CDS Cbei_0180 NC_009617.1 206633 207580 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 206633..207580 Clostridium beijerinckii NCIMB 8052 5291414 YP_001307327.1 CDS rplQ NC_009617.1 207593 207934 D is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 207593..207934 Clostridium beijerinckii NCIMB 8052 5291415 YP_001307328.1 CDS Cbei_0182 NC_009617.1 208168 209019 D with CbiNQ forms the ABC transporter for cobalt import; Mycoplasmas have two adjacent copies of this gene; cobalt transporter ATP-binding subunit 208168..209019 Clostridium beijerinckii NCIMB 8052 5291416 YP_001307329.1 CDS cbiO NC_009617.1 209004 209873 D with CbiNQ forms the ABC transporter for cobalt import; Clostridia have two adjacent copies of this gene; cobalt transporter ATP-binding subunit 209004..209873 Clostridium beijerinckii NCIMB 8052 5291417 YP_001307330.1 CDS Cbei_0184 NC_009617.1 209882 210688 D PFAM: cobalt transport protein; KEGG: cpf:CPF_2681 cobalt ABC transporter permease; cobalt transport protein 209882..210688 Clostridium beijerinckii NCIMB 8052 5291418 YP_001307331.1 CDS truA NC_009617.1 210705 211439 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 210705..211439 Clostridium beijerinckii NCIMB 8052 5291419 YP_001307332.1 CDS rplM NC_009617.1 211600 212034 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 211600..212034 Clostridium beijerinckii NCIMB 8052 5291420 YP_001307333.1 CDS rpsI NC_009617.1 212061 212453 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 212061..212453 Clostridium beijerinckii NCIMB 8052 5291421 YP_001307334.1 CDS Cbei_0188 NC_009617.1 212974 213636 D TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD; PFAM: cell wall hydrolase/autolysin; KEGG: cpr:CPR_2361 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase CwlD 212974..213636 Clostridium beijerinckii NCIMB 8052 5291422 YP_001307335.1 CDS Cbei_0189 NC_009617.1 214215 215057 D Catalyzes the reversible hydration of fumaric acid to yield I-malic acid; fumarate hydratase 214215..215057 Clostridium beijerinckii NCIMB 8052 5291423 YP_001307336.1 CDS Cbei_0190 NC_009617.1 215262 215819 D Catalyzes the reversible hydration of fumaric acid to yield l-malic acid; fumarate hydratase 215262..215819 Clostridium beijerinckii NCIMB 8052 5291424 YP_001307337.1 CDS Cbei_0191 NC_009617.1 215860 216621 D PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: cno:NT01CX_0444 TPR domain protein; hypothetical protein 215860..216621 Clostridium beijerinckii NCIMB 8052 5291425 YP_001307338.1 CDS Cbei_0192 NC_009617.1 216687 217379 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cpf:CPF_2674 DNA-binding response regulator; two component transcriptional regulator 216687..217379 Clostridium beijerinckii NCIMB 8052 5291426 YP_001307339.1 CDS Cbei_0193 NC_009617.1 217546 218706 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cpr:CPR_2358 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 217546..218706 Clostridium beijerinckii NCIMB 8052 5291427 YP_001307340.1 CDS Cbei_0194 NC_009617.1 218903 221134 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 218903..221134 Clostridium beijerinckii NCIMB 8052 5291428 YP_001307341.1 CDS nrdF NC_009617.1 221388 222422 D B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 221388..222422 Clostridium beijerinckii NCIMB 8052 5291429 YP_001307342.1 CDS Cbei_0196 NC_009617.1 222653 224272 D TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein, mobile region; PEP-utilising protein domain protein; KEGG: cpe:CPE2357 phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase 222653..224272 Clostridium beijerinckii NCIMB 8052 5291430 YP_001307343.1 CDS Cbei_0197 NC_009617.1 224417 225682 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cno:NT01CX_1157 TPR-repeat-containing protein; hypothetical protein 224417..225682 Clostridium beijerinckii NCIMB 8052 5291431 YP_001307344.1 CDS Cbei_0198 NC_009617.1 225844 227019 D TIGRFAM: isoaspartyl dipeptidase; PFAM: amidohydrolase; KEGG: cpf:CPF_2665 isoaspartyl dipeptidase; isoaspartyl dipeptidase 225844..227019 Clostridium beijerinckii NCIMB 8052 5291432 YP_001307345.1 CDS Cbei_0199 NC_009617.1 227090 227695 R PFAM: cell wall hydrolase, SleB; KEGG: cpr:CPR_2348 spore-cortex-lytic enzyme; cell wall hydrolase SleB complement(227090..227695) Clostridium beijerinckii NCIMB 8052 5291433 YP_001307346.1 CDS Cbei_0200 NC_009617.1 227940 228788 D PFAM: protein of unknown function DUF147; KEGG: cpr:CPR_2346 conserved hypothetical protein TIGR00159; hypothetical protein 227940..228788 Clostridium beijerinckii NCIMB 8052 5291434 YP_001307347.1 CDS Cbei_0201 NC_009617.1 228761 229981 D PFAM: YbbR family protein; KEGG: cpr:CPR_2345 hypothetical protein; hypothetical protein 228761..229981 Clostridium beijerinckii NCIMB 8052 5291435 YP_001307348.1 CDS Cbei_0202 NC_009617.1 230153 231754 D PFAM: HI0933 family protein; KEGG: cpf:CPF_2658 hypothetical protein; hypothetical protein 230153..231754 Clostridium beijerinckii NCIMB 8052 5291436 YP_001307349.1 CDS Cbei_0203 NC_009617.1 232027 232935 D catalyzes the synthesis of butanoylphosphate from butanoyl-CoA and inorganic phosphate; phosphate butyryltransferase 232027..232935 Clostridium beijerinckii NCIMB 8052 5291437 YP_001307350.1 CDS Cbei_0204 NC_009617.1 233080 234147 D catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase 233080..234147 Clostridium beijerinckii NCIMB 8052 5291438 YP_001307351.1 CDS Cbei_0205 NC_009617.1 234292 234765 D TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cpr:CPR_1097 HDIG/HD domain protein; metal dependent phosphohydrolase 234292..234765 Clostridium beijerinckii NCIMB 8052 5291439 YP_001307352.1 CDS Cbei_0206 NC_009617.1 234782 235591 D TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS; KEGG: cpe:CPE1021 dihydropteroate synthase; dihydropteroate synthase 234782..235591 Clostridium beijerinckii NCIMB 8052 5291440 YP_001307353.1 CDS Cbei_0207 NC_009617.1 235604 236428 D TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; dihydroneopterin aldolase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: cpf:CPF_1277 dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 235604..236428 Clostridium beijerinckii NCIMB 8052 5291441 YP_001307354.1 CDS Cbei_0208 NC_009617.1 236467 237303 D PFAM: protein of unknown function DUF124; KEGG: cpf:CPF_2644 hypothetical protein; hypothetical protein 236467..237303 Clostridium beijerinckii NCIMB 8052 5291442 YP_001307355.1 CDS Cbei_0209 NC_009617.1 237444 237797 D TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor; KEGG: cpr:CPR_2329 TrpR-like protein YerC/YecD; TrpR-like protein YerC/YecD 237444..237797 Clostridium beijerinckii NCIMB 8052 5291443 YP_001307356.1 CDS glmM NC_009617.1 238013 239359 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 238013..239359 Clostridium beijerinckii NCIMB 8052 5291444 YP_001307357.1 CDS Cbei_0211 NC_009617.1 239587 240012 D KEGG: cpr:CPR_2064 hypothetical protein; hypothetical protein 239587..240012 Clostridium beijerinckii NCIMB 8052 5291445 YP_001307358.1 CDS Cbei_0212 NC_009617.1 240552 241061 D TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: mbu:Mbur_0709 acetolactate synthase, small subunit; acetolactate synthase small subunit 240552..241061 Clostridium beijerinckii NCIMB 8052 5291446 YP_001307359.1 CDS Cbei_0213 NC_009617.1 241127 242722 D TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: cth:Cthe_2519 2-isopropylmalate synthase/homocitrate synthase family protein; alpha-isopropylmalate/homocitrate synthase family transferase 241127..242722 Clostridium beijerinckii NCIMB 8052 5291447 YP_001307360.1 CDS Cbei_0214 NC_009617.1 242736 243995 D catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit 242736..243995 Clostridium beijerinckii NCIMB 8052 5291448 YP_001307361.1 CDS leuD NC_009617.1 244009 244494 D catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase small subunit 244009..244494 Clostridium beijerinckii NCIMB 8052 5291449 YP_001307362.1 CDS Cbei_0216 NC_009617.1 244634 245716 D catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 244634..245716 Clostridium beijerinckii NCIMB 8052 5291450 YP_001307363.1 CDS Cbei_0217 NC_009617.1 245786 247459 D TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein, central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: cth:Cthe_2714 acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit 245786..247459 Clostridium beijerinckii NCIMB 8052 5291451 YP_001307364.1 CDS Cbei_0218 NC_009617.1 247472 248476 D catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 247472..248476 Clostridium beijerinckii NCIMB 8052 5291452 YP_001307365.1 CDS Cbei_0219 NC_009617.1 249021 251945 D PFAM: sigma-54 factor, interaction domain-containing protein; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PTS system fructose subfamily IIA component; PRD domain protein; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; KEGG: tte:TTE0180 NtrC family transcriptional regulator, ATPase domain; sigma-54 factor interaction domain-containing protein 249021..251945 Clostridium beijerinckii NCIMB 8052 5291453 YP_001307366.1 CDS Cbei_0220 NC_009617.1 252039 252506 D PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: tte:TTE0181 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 252039..252506 Clostridium beijerinckii NCIMB 8052 5291454 YP_001307367.1 CDS Cbei_0221 NC_009617.1 252522 252800 D PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: lwe:lwe2615 PTS system, galactitol-specific, IIB component; phosphotransferase system, lactose/cellobiose-specific IIB subunit 252522..252800 Clostridium beijerinckii NCIMB 8052 5291455 YP_001307368.1 CDS Cbei_0222 NC_009617.1 252876 254150 D TIGRFAM: PTS system, galactitol-specific IIC subunit; PFAM: PTS system Galactitol-specific IIC component; KEGG: lwe:lwe2614 PTS system, galactitol-specific, IIC component; PTS system galactitol-specific transporter subunit IIC 252876..254150 Clostridium beijerinckii NCIMB 8052 5291456 YP_001307369.1 CDS Cbei_0223 NC_009617.1 254220 255251 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: lmo:lmo2663 polyol dehydrogenase; alcohol dehydrogenase 254220..255251 Clostridium beijerinckii NCIMB 8052 5291457 YP_001307370.1 CDS Cbei_0224 NC_009617.1 255275 256093 D PFAM: Transketolase domain protein; KEGG: cpf:CPF_0292 transketolase, N-terminal subunit; transketolase domain-containing protein 255275..256093 Clostridium beijerinckii NCIMB 8052 5291458 YP_001307371.1 CDS Cbei_0225 NC_009617.1 256093 257013 D PFAM: Transketolase, central region; Transketolase domain protein; KEGG: cpr:CPR_0288 transketolase; transketolase, central region 256093..257013 Clostridium beijerinckii NCIMB 8052 5291459 YP_001307372.1 CDS Cbei_0226 NC_009617.1 257057 257728 D PFAM: ribulose-phosphate 3-epimerase; KEGG: tte:TTE1498 Pentose-5-phosphate-3-epimerase; ribulose-phosphate 3-epimerase 257057..257728 Clostridium beijerinckii NCIMB 8052 5291460 YP_001307373.1 CDS Cbei_0227 NC_009617.1 257842 258291 D TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; KEGG: lin:lin2811 similar to ribose 5-phosphate epimerase; RpiB/LacA/LacB family sugar-phosphate isomerase 257842..258291 Clostridium beijerinckii NCIMB 8052 5291461 YP_001307374.1 CDS Cbei_0228 NC_009617.1 258399 259928 D PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: lwe:lwe1891 phosphoglucomutase/phosphomannomutase family protein; phosphomannomutase 258399..259928 Clostridium beijerinckii NCIMB 8052 5291462 YP_001307375.1 CDS Cbei_0229 NC_009617.1 260139 260402 D PFAM: Excinuclease ABC, C subunit domain protein; KEGG: cpe:CPE1444 endonuclease; excinuclease ABC subunit C 260139..260402 Clostridium beijerinckii NCIMB 8052 5291463 YP_001307376.1 CDS Cbei_0230 NC_009617.1 260772 262085 D PFAM: extracellular solute-binding protein, family 1; KEGG: cno:NT01CX_0965 hypothetical ABC transporter extracellular binding protein; extracellular solute-binding protein 260772..262085 Clostridium beijerinckii NCIMB 8052 5291464 YP_001307377.1 CDS Cbei_0231 NC_009617.1 262194 263060 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB2569 multiple sugar-binding transport system permease; binding-protein-dependent transport system inner membrane protein 262194..263060 Clostridium beijerinckii NCIMB 8052 5291465 YP_001307378.1 CDS Cbei_0232 NC_009617.1 263060 263959 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cno:NT01CX_0967 sugar ABC transporter permease; binding-protein-dependent transport system inner membrane protein 263060..263959 Clostridium beijerinckii NCIMB 8052 5291466 YP_001307379.1 CDS Cbei_0233 NC_009617.1 264114 265604 D amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 264114..265604 Clostridium beijerinckii NCIMB 8052 5291467 YP_001307380.1 CDS Cbei_0234 NC_009617.1 265991 266992 D PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: cpe:CPE0417 probable transcriptional regulator; alanine racemase 265991..266992 Clostridium beijerinckii NCIMB 8052 5291468 YP_001307381.1 CDS Cbei_0235 NC_009617.1 267230 268435 D KEGG: ctc:CTC00542 encapsulation protein CapA; encapsulation protein CapA 267230..268435 Clostridium beijerinckii NCIMB 8052 5291469 YP_001307382.1 CDS Cbei_0236 NC_009617.1 268865 270301 D TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dsy:DSY3620 hypothetical protein; RND family efflux transporter MFP subunit 268865..270301 Clostridium beijerinckii NCIMB 8052 5291470 YP_001307383.1 CDS Cbei_0237 NC_009617.1 270307 271044 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY3619 hypothetical protein; ABC transporter 270307..271044 Clostridium beijerinckii NCIMB 8052 5291471 YP_001307384.1 CDS Cbei_0238 NC_009617.1 271035 272306 D PFAM: protein of unknown function DUF214; KEGG: dsy:DSY3618 hypothetical protein; hypothetical protein 271035..272306 Clostridium beijerinckii NCIMB 8052 5291472 YP_001307385.1 CDS Cbei_0239 NC_009617.1 272922 274070 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: cac:CAC0390 cystathionine gamma-synthase; cystathionine gamma-synthase 272922..274070 Clostridium beijerinckii NCIMB 8052 5291473 YP_001307386.1 CDS Cbei_0240 NC_009617.1 274105 275241 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: cac:CAC0391 cystathionine beta-lyase; cystathionine gamma-synthase 274105..275241 Clostridium beijerinckii NCIMB 8052 5291474 YP_001307387.1 CDS Cbei_0241 NC_009617.1 275427 275912 R PFAM: regulatory protein, MarR; KEGG: cpr:CPR_0493 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(275427..275912) Clostridium beijerinckii NCIMB 8052 5291475 YP_001307388.1 CDS Cbei_0242 NC_009617.1 276262 277668 D TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphotransferase system, EIIC; phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: cac:CAC0154 PTS system, mannitol-specific IIBC component (gene MtlA); PTS system mannitol-specific transporter subunit IIC 276262..277668 Clostridium beijerinckii NCIMB 8052 5291476 YP_001307389.1 CDS Cbei_0243 NC_009617.1 278207 280258 D PFAM: PRD domain protein; KEGG: cac:CAC0155 regulator of the PTS system for mannitol (gene MltR); transcriptional antiterminator BglG 278207..280258 Clostridium beijerinckii NCIMB 8052 5291477 YP_001307390.1 CDS Cbei_0244 NC_009617.1 280258 280698 D PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: cac:CAC0156 PTS system, mannitol-specific IIA domain (Ntr-type) (gene MltF); phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 280258..280698 Clostridium beijerinckii NCIMB 8052 5291478 YP_001307391.1 CDS Cbei_0245 NC_009617.1 280700 281845 D PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain; KEGG: spt:SPA3538 mannitol-1-phosphate dehydrogenase; mannitol dehydrogenase domain-containing protein 280700..281845 Clostridium beijerinckii NCIMB 8052 5291479 YP_001307392.1 CDS Cbei_0246 NC_009617.1 282511 284337 D TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase, class-II; sugar isomerase (SIS); KEGG: cpe:CPE2327 glutamine-fructose-6-phosphate transaminase; glucosamine--fructose-6-phosphate aminotransferase 282511..284337 Clostridium beijerinckii NCIMB 8052 5291480 YP_001307393.1 CDS Cbei_0247 NC_009617.1 285666 286319 D TIGRFAM: serine O-acetyltransferase; KEGG: mta:Moth_2485 serine O-acetyltransferase; serine O-acetyltransferase 285666..286319 Clostridium beijerinckii NCIMB 8052 5291481 YP_001307394.1 CDS Cbei_0248 NC_009617.1 286746 287459 D PFAM: Thioesterase; KEGG: bcz:BCZK1713 thioesterase; oleoyl-(acyl-carrier-protein) hydrolase 286746..287459 Clostridium beijerinckii NCIMB 8052 5291482 YP_001307395.1 CDS Cbei_0249 NC_009617.1 287536 288549 D KEGG: bat:BAS2541 hypothetical protein; hypothetical protein 287536..288549 Clostridium beijerinckii NCIMB 8052 5291483 YP_001307396.1 CDS Cbei_0250 NC_009617.1 288600 300704 D TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Non-ribosomal peptide synthetase; KEGG: bat:BAS2540 AMP-binding enzyme; amino acid adenylation domain-containing protein 288600..300704 Clostridium beijerinckii NCIMB 8052 5291484 YP_001307397.1 CDS Cbei_0251 NC_009617.1 300965 304642 D PFAM: condensation domain protein; phosphopantetheine-binding; Beta-ketoacyl synthase-like; KEGG: smu:SMU.1343c polyketide synthase; erythronolide synthase 300965..304642 Clostridium beijerinckii NCIMB 8052 5291485 YP_001307398.1 CDS Cbei_0252 NC_009617.1 304777 306954 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; phosphopantetheine-binding; Male sterility C-terminal domain; KEGG: smu:SMU.1339 bacitracin synthetase; hypothetical protein 304777..306954 Clostridium beijerinckii NCIMB 8052 5291486 YP_001307399.1 CDS Cbei_0253 NC_009617.1 307058 308176 D PFAM: peptidase U32; KEGG: mja:MJ1657 hypothetical protein; peptidase U32 307058..308176 Clostridium beijerinckii NCIMB 8052 5291487 YP_001307400.1 CDS Cbei_0254 NC_009617.1 308234 309694 D PFAM: AMP-dependent synthetase and ligase; KEGG: vch:VC0249 RfbL protein; AMP-dependent synthetase and ligase 308234..309694 Clostridium beijerinckii NCIMB 8052 5291488 YP_001307401.1 CDS Cbei_0255 NC_009617.1 309974 310747 D PFAM: BAAT/Acyl-CoA thioester hydrolase-like; KEGG: cac:CAC3407 acyl-CoA thioesterase 1; BAAT/Acyl-CoA thioester hydrolase-like protein 309974..310747 Clostridium beijerinckii NCIMB 8052 5291489 YP_001307402.1 CDS Cbei_0256 NC_009617.1 310972 311670 D PFAM: 4'-phosphopantetheinyl transferase; KEGG: cth:Cthe_0737 phosphopantethiene-protein transferase; 4'-phosphopantetheinyl transferase 310972..311670 Clostridium beijerinckii NCIMB 8052 5291490 YP_001307403.1 CDS Cbei_0257 NC_009617.1 311848 313116 D TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: cac:CAC3575 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 311848..313116 Clostridium beijerinckii NCIMB 8052 5291491 YP_001307404.1 CDS Cbei_0259 NC_009617.1 314078 314692 R PFAM: regulatory protein, TetR; KEGG: smu:SMU.134 transcriptional regulator (TetR/AcrR family); TetR family transcriptional regulator complement(314078..314692) Clostridium beijerinckii NCIMB 8052 5296288 YP_001307405.1 CDS Cbei_0260 NC_009617.1 314846 316297 D TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: chy:CHY_0588 drug resistance transporter EmrB/QacA family protein; EmrB/QacA family drug resistance transporter 314846..316297 Clostridium beijerinckii NCIMB 8052 5291493 YP_001307406.1 CDS Cbei_0261 NC_009617.1 316679 318118 D TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dsy:DSY3620 hypothetical protein; RND family efflux transporter MFP subunit 316679..318118 Clostridium beijerinckii NCIMB 8052 5291494 YP_001307407.1 CDS Cbei_0262 NC_009617.1 318130 318828 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY3669 hypothetical protein; ABC transporter 318130..318828 Clostridium beijerinckii NCIMB 8052 5291495 YP_001307408.1 CDS Cbei_0263 NC_009617.1 318869 321079 D PFAM: protein of unknown function DUF214; KEGG: cac:CAC1534 predicted permease; hypothetical protein 318869..321079 Clostridium beijerinckii NCIMB 8052 5291496 YP_001307409.1 CDS Cbei_0264 NC_009617.1 321201 321362 D hypothetical protein 321201..321362 Clostridium beijerinckii NCIMB 8052 5291497 YP_001307410.1 CDS Cbei_0265 NC_009617.1 321510 321644 D hypothetical protein 321510..321644 Clostridium beijerinckii NCIMB 8052 5291498 YP_001307411.1 CDS Cbei_0266 NC_009617.1 321631 321885 D hypothetical protein 321631..321885 Clostridium beijerinckii NCIMB 8052 5291499 YP_001307412.1 CDS Cbei_0267 NC_009617.1 322475 323302 D PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: fnu:FN0219 autolysin response regulator; LytTR family two component transcriptional regulator 322475..323302 Clostridium beijerinckii NCIMB 8052 5291500 YP_001307413.1 CDS Cbei_0268 NC_009617.1 323292 324539 D KEGG: dsy:DSY2529 hypothetical protein; signal transduction histidine kinase regulating citrate/malate metabolism 323292..324539 Clostridium beijerinckii NCIMB 8052 5291501 YP_001307414.1 CDS Cbei_0269 NC_009617.1 324594 325196 R PFAM: Accessory gene regulator B; KEGG: cth:Cthe_2358 accessory gene regulator B; accessory gene regulator B complement(324594..325196) Clostridium beijerinckii NCIMB 8052 5291502 YP_001307415.1 CDS Cbei_0271 NC_009617.1 326930 327541 R PFAM: regulatory protein, TetR; KEGG: bce:BC4570 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(326930..327541) Clostridium beijerinckii NCIMB 8052 5296289 YP_001307416.1 CDS Cbei_0272 NC_009617.1 327671 328876 D KEGG: cac:CAC3402 dipeptidyl aminopeptidase/acylaminoacyl-peptidase related protein; dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein 327671..328876 Clostridium beijerinckii NCIMB 8052 5291504 YP_001307417.1 CDS Cbei_0273 NC_009617.1 328919 329467 D PFAM: NADPH-dependent FMN reductase; KEGG: cac:CAC3495 multimeric flavodoxin WrbA family protein; NADPH-dependent FMN reductase 328919..329467 Clostridium beijerinckii NCIMB 8052 5291505 YP_001307418.1 CDS Cbei_0274 NC_009617.1 329683 331002 R PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC0161 ABC transporter (permease); major facilitator superfamily transporter complement(329683..331002) Clostridium beijerinckii NCIMB 8052 5291506 YP_001307419.1 CDS Cbei_0275 NC_009617.1 331035 331430 R PFAM: regulatory protein, MarR; iron dependent repressor; KEGG: dsy:DSY3767 hypothetical protein; iron dependent repressor complement(331035..331430) Clostridium beijerinckii NCIMB 8052 5291507 YP_001307420.1 CDS Cbei_0276 NC_009617.1 332155 332628 R PFAM: regulatory protein, MarR; KEGG: cac:CAC0162 transcriptional regulator MarR/EmrR family; MarR family transcriptional regulator complement(332155..332628) Clostridium beijerinckii NCIMB 8052 5291508 YP_001307421.1 CDS Cbei_0277 NC_009617.1 332858 333436 R PFAM: cyclase family protein; KEGG: ctc:CTC01896 polyketide cyclase; cyclase family protein complement(332858..333436) Clostridium beijerinckii NCIMB 8052 5291509 YP_001307422.1 CDS Cbei_0278 NC_009617.1 333631 334092 D PFAM: regulatory protein, MarR; KEGG: bat:BAS0708 transcriptional regulator, MarR family; MarR family transcriptional regulator 333631..334092 Clostridium beijerinckii NCIMB 8052 5291510 YP_001307423.1 CDS Cbei_0279 NC_009617.1 334109 334639 D PFAM: chemotaxis sensory transducer; KEGG: bca:BCE_5181 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 334109..334639 Clostridium beijerinckii NCIMB 8052 5291511 YP_001307424.1 CDS Cbei_0280 NC_009617.1 335111 335536 D hypothetical protein 335111..335536 Clostridium beijerinckii NCIMB 8052 5291512 YP_001307425.1 CDS Cbei_0281 NC_009617.1 335615 336412 D KEGG: cpr:CPR_0050 hypothetical protein; hypothetical protein 335615..336412 Clostridium beijerinckii NCIMB 8052 5291513 YP_001307426.1 CDS Cbei_0282 NC_009617.1 336442 337140 D KEGG: cpr:CPR_0051 hypothetical protein; hypothetical protein 336442..337140 Clostridium beijerinckii NCIMB 8052 5291514 YP_001307427.1 CDS Cbei_0283 NC_009617.1 337152 337787 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cth:Cthe_2290 ABC transporter protein; ABC transporter 337152..337787 Clostridium beijerinckii NCIMB 8052 5291515 YP_001307428.1 CDS Cbei_0284 NC_009617.1 337777 338484 D hypothetical protein 337777..338484 Clostridium beijerinckii NCIMB 8052 5291516 YP_001307429.1 CDS Cbei_0285 NC_009617.1 338773 341034 D TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase, family 35; KEGG: spd:SPD_1932 maltodextrin phosphorylase; glycogen/starch/alpha-glucan phosphorylase 338773..341034 Clostridium beijerinckii NCIMB 8052 5291517 YP_001307430.1 CDS Cbei_0286 NC_009617.1 341168 341839 R PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: btl:BALH_2808 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein complement(341168..341839) Clostridium beijerinckii NCIMB 8052 5291518 YP_001307431.1 CDS Cbei_0287 NC_009617.1 342176 344179 D PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: cac:CAC2547 possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain; methyl-accepting chemotaxis sensory transducer 342176..344179 Clostridium beijerinckii NCIMB 8052 5291519 YP_001307432.1 CDS Cbei_0288 NC_009617.1 344332 344919 D PFAM: Rubrerythrin; KEGG: cpf:CPF_0133 rubrerythrin; rubrerythrin 344332..344919 Clostridium beijerinckii NCIMB 8052 5291520 YP_001307433.1 CDS Cbei_0289 NC_009617.1 345077 345493 D KEGG: cpr:CPR_1932 hypothetical protein; hypothetical protein 345077..345493 Clostridium beijerinckii NCIMB 8052 5291521 YP_001307434.1 CDS Cbei_0290 NC_009617.1 345579 346196 R PFAM: protein of unknown function DUF886; KEGG: ctc:CTC00834 hypothetical protein; hypothetical protein complement(345579..346196) Clostridium beijerinckii NCIMB 8052 5291522 YP_001307435.1 CDS Cbei_0291 NC_009617.1 346478 347068 D PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: cpr:CPR_2319 5-formyltetrahydrofolate cyclo-ligase family protein; 5-formyltetrahydrofolate cyclo-ligase 346478..347068 Clostridium beijerinckii NCIMB 8052 5291523 YP_001307436.1 CDS Cbei_0292 NC_009617.1 347103 349712 D KEGG: cpf:CPF_0202 hypothetical protein; hypothetical protein 347103..349712 Clostridium beijerinckii NCIMB 8052 5291524 YP_001307437.1 CDS thrS NC_009617.1 349863 351794 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(349863..351794) Clostridium beijerinckii NCIMB 8052 5291525 YP_001307438.1 CDS Cbei_0294 NC_009617.1 352392 354869 D PFAM: chemotaxis sensory transducer; KEGG: ctc:CTC00924 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 352392..354869 Clostridium beijerinckii NCIMB 8052 5291526 YP_001307439.1 CDS Cbei_0295 NC_009617.1 355244 355648 R KEGG: cpr:CPR_2310 hypothetical protein; hypothetical protein complement(355244..355648) Clostridium beijerinckii NCIMB 8052 5296291 YP_001307440.1 CDS Cbei_0296 NC_009617.1 355919 356674 D KEGG: cpr:CPR_2309 hypothetical protein; hypothetical protein 355919..356674 Clostridium beijerinckii NCIMB 8052 5291528 YP_001307441.1 CDS ispF NC_009617.1 356778 357254 R catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase complement(356778..357254) Clostridium beijerinckii NCIMB 8052 5291529 YP_001307442.1 CDS Cbei_0298 NC_009617.1 357636 358667 D KEGG: cpe:CPE2314 hypothetical protein; hypothetical protein 357636..358667 Clostridium beijerinckii NCIMB 8052 5291530 YP_001307443.1 CDS Cbei_0299 NC_009617.1 358683 359642 R PFAM: polysaccharide deacetylase; KEGG: ctc:CTC00229 polysaccharide deacetylase; polysaccharide deacetylase complement(358683..359642) Clostridium beijerinckii NCIMB 8052 5291531 YP_001307444.1 CDS Cbei_0300 NC_009617.1 360049 360804 D KEGG: swo:Swol_1623 hypothetical protein; hypothetical protein 360049..360804 Clostridium beijerinckii NCIMB 8052 5291532 YP_001307445.1 CDS Cbei_0301 NC_009617.1 361045 362091 R catalyzes the formation of biotin from dethiobiotin and sulfur; biotin synthase complement(361045..362091) Clostridium beijerinckii NCIMB 8052 5291533 YP_001307446.1 CDS Cbei_0302 NC_009617.1 362304 362738 D PFAM: regulatory protein, MarR; KEGG: mma:MM0116 transcriptional regulator, MarR family; MarR family transcriptional regulator 362304..362738 Clostridium beijerinckii NCIMB 8052 5291534 YP_001307447.1 CDS Cbei_0303 NC_009617.1 362859 363248 D KEGG: bat:BAS3106 hypothetical protein; hypothetical protein 362859..363248 Clostridium beijerinckii NCIMB 8052 5291535 YP_001307448.1 CDS Cbei_0304 NC_009617.1 363257 363583 D PFAM: small multidrug resistance protein; KEGG: cac:CAC3666 membrane transporters of cations and cationic drugs; small multidrug resistance protein 363257..363583 Clostridium beijerinckii NCIMB 8052 5291536 YP_001307449.1 CDS Cbei_0305 NC_009617.1 363882 366476 D PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: cpe:CPE2531 alcohol dehydrogenase / acetaldehyde dehydrogenase; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 363882..366476 Clostridium beijerinckii NCIMB 8052 5291537 YP_001307450.1 CDS Cbei_0306 NC_009617.1 366579 369242 R TIGRFAM: ATPase P; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: cpe:CPE0333 probable cation-transporting ATPase; ATPase P complement(366579..369242) Clostridium beijerinckii NCIMB 8052 5291538 YP_001307451.1 CDS Cbei_0307 NC_009617.1 369830 371539 D PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC0443 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 369830..371539 Clostridium beijerinckii NCIMB 8052 5291539 YP_001307452.1 CDS Cbei_0308 NC_009617.1 371774 372616 D PFAM: Patatin; KEGG: cpf:CPF_1546 phospholipase, patatin family; patatin 371774..372616 Clostridium beijerinckii NCIMB 8052 5291540 YP_001307453.1 CDS Cbei_0309 NC_009617.1 372800 373501 D PFAM: GntR family transcriptional regulator; GntR domain protein; KEGG: cpr:CPR_0301 hypothetical protein; GntR family transcriptional regulator 372800..373501 Clostridium beijerinckii NCIMB 8052 5291541 YP_001307454.1 CDS Cbei_0310 NC_009617.1 374026 374814 D PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; KEGG: cpe:CPE0311 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha/beta-subunit-like protein 374026..374814 Clostridium beijerinckii NCIMB 8052 5291542 YP_001307455.1 CDS Cbei_0311 NC_009617.1 374870 376060 D PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; Electron transfer flavoprotein, alpha subunit-like; KEGG: ctc:CTC00974 electron transfer flavoprotein alpha-subunit; electron transfer flavoprotein subunit alpha-like protein 374870..376060 Clostridium beijerinckii NCIMB 8052 5291543 YP_001307456.1 CDS Cbei_0312 NC_009617.1 376064 377467 D PFAM: FAD linked oxidase domain protein; KEGG: cac:CAC2542 FAD/FMN-containing dehydrogenase; FAD linked oxidase domain-containing protein 376064..377467 Clostridium beijerinckii NCIMB 8052 5291544 YP_001307457.1 CDS Cbei_0313 NC_009617.1 377805 378377 D TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sth:STH169 RNA polymerase ECF-type sigma factor; ECF subfamily RNA polymerase sigma-24 factor 377805..378377 Clostridium beijerinckii NCIMB 8052 5291545 YP_001307458.1 CDS Cbei_0314 NC_009617.1 378396 379307 D hypothetical protein 378396..379307 Clostridium beijerinckii NCIMB 8052 5291546 YP_001307459.1 CDS Cbei_0315 NC_009617.1 379586 381940 D TIGRFAM: pyruvate formate-lyase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL; KEGG: sdy:SDY_3786 formate acetyltransferase 2; pyruvate formate-lyase 379586..381940 Clostridium beijerinckii NCIMB 8052 5291547 YP_001307460.1 CDS Cbei_0316 NC_009617.1 381944 382879 D TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Radical SAM domain protein; KEGG: tko:TK0290 pyruvate-formate lyase-activating enzyme; glycyl-radical activating family protein 381944..382879 Clostridium beijerinckii NCIMB 8052 5291548 YP_001307461.1 CDS Cbei_0317 NC_009617.1 383097 383774 D PFAM: Transaldolase; KEGG: vpa:VPA1569 transaldolase; transaldolase 383097..383774 Clostridium beijerinckii NCIMB 8052 5291549 YP_001307462.1 CDS Cbei_0318 NC_009617.1 383890 384957 D PFAM: Nucleotidyl transferase; KEGG: cpr:CPR_2294 mannose-1-phosphate guanylyltransferase; mannose-1-phosphate guanylyltransferase (GDP) 383890..384957 Clostridium beijerinckii NCIMB 8052 5291550 YP_001307463.1 CDS Cbei_0319 NC_009617.1 385287 385868 D KEGG: cpr:CPR_2292 hypothetical protein; hypothetical protein 385287..385868 Clostridium beijerinckii NCIMB 8052 5291551 YP_001307464.1 CDS Cbei_0320 NC_009617.1 386403 387038 D modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex 386403..387038 Clostridium beijerinckii NCIMB 8052 5291552 YP_001307465.1 CDS Cbei_0321 NC_009617.1 387416 388201 D catalyzes the formation of crotonoyl-CoA from (3R)-3-hydroxybutanoyl-CoA; 3-hydroxybutyryl-CoA dehydratase 387416..388201 Clostridium beijerinckii NCIMB 8052 5291553 YP_001307466.1 CDS Cbei_0322 NC_009617.1 388286 389425 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: cpr:CPR_2286 butyryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 388286..389425 Clostridium beijerinckii NCIMB 8052 5291554 YP_001307467.1 CDS Cbei_0323 NC_009617.1 389439 390218 D PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; KEGG: cpe:CPE2299 electron transfer flavoprotein beta subunit; electron transfer flavoprotein, alpha/beta-subunit-like protein 389439..390218 Clostridium beijerinckii NCIMB 8052 5291555 YP_001307468.1 CDS Cbei_0324 NC_009617.1 390241 391248 D PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; Electron transfer flavoprotein, alpha subunit-like; KEGG: cpr:CPR_2284 3-hydroxybutyryl-CoA dehydrogenase; electron transfer flavoprotein, alpha/beta-subunit-like protein 390241..391248 Clostridium beijerinckii NCIMB 8052 5291556 YP_001307469.1 CDS Cbei_0325 NC_009617.1 391440 392288 D converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 391440..392288 Clostridium beijerinckii NCIMB 8052 5291557 YP_001307470.1 CDS Cbei_0326 NC_009617.1 392811 393740 D PFAM: 8-oxoguanine DNA glycosylase domain protein; SMART: HhH-GPD family protein; KEGG: cpr:CPR_2279 8-oxoguanine DNA glycosylase; 8-oxoguanine DNA glycosylase 392811..393740 Clostridium beijerinckii NCIMB 8052 5291558 YP_001307471.1 CDS Cbei_0327 NC_009617.1 394117 395607 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; hydrogenase large subunit domain protein; KEGG: cno:NT01CX_0464 Fe-hydrogenase large subunit family protein; ferredoxin hydrogenase 394117..395607 Clostridium beijerinckii NCIMB 8052 5291559 YP_001307472.1 CDS groES NC_009617.1 396015 396299 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 396015..396299 Clostridium beijerinckii NCIMB 8052 5291560 YP_001307473.1 CDS groEL NC_009617.1 396391 398016 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 396391..398016 Clostridium beijerinckii NCIMB 8052 5291561 YP_001307474.1 CDS Cbei_0330 NC_009617.1 398340 398816 D KEGG: cno:NT01CX_1958 hypothetical protein; Type II secretory pathway pseudopilin PulG-like protein 398340..398816 Clostridium beijerinckii NCIMB 8052 5291562 YP_001307475.1 CDS Cbei_0331 NC_009617.1 399174 400631 D catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 399174..400631 Clostridium beijerinckii NCIMB 8052 5291563 YP_001307476.1 CDS guaA NC_009617.1 400819 402351 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 400819..402351 Clostridium beijerinckii NCIMB 8052 5291564 YP_001307477.1 CDS Cbei_0333 NC_009617.1 402770 403093 D hypothetical protein 402770..403093 Clostridium beijerinckii NCIMB 8052 5291565 YP_001307478.1 CDS Cbei_0334 NC_009617.1 403535 405460 D PFAM: regulatory protein, DeoR; M trans-acting positive regulator; PRD domain protein; Helix-turn-helix, type 11 domain protein; KEGG: pac:PPA1482 regulator of sorbitol operon; transcriptional antiterminator BglG 403535..405460 Clostridium beijerinckii NCIMB 8052 5291566 YP_001307479.1 CDS Cbei_0335 NC_009617.1 405475 405927 D PFAM: Glucitol operon activator; KEGG: bld:BLi03867 hypothetical protein; glucitol operon activator 405475..405927 Clostridium beijerinckii NCIMB 8052 5291567 YP_001307480.1 CDS Cbei_0336 NC_009617.1 405943 406491 D TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC subunit; PFAM: PTS system protein II sorbitol-specific factor; KEGG: lsl:LSL_1891 PTS system, glucitol/sorbitol-specific IIC2 component; PTS system glucitol/sorbitol-specific transporter subunit IIC 405943..406491 Clostridium beijerinckii NCIMB 8052 5291568 YP_001307481.1 CDS Cbei_0337 NC_009617.1 406509 407519 D TIGRFAM: PTS system, glucitol/sorbitol-specific, IIBC subunit; PFAM: Sorbitol phosphotransferase protein II domain protein; KEGG: pac:PPA1485 PTS system, glucitol/sorbitol-specific IIBC component; PTS system glucitol/sorbitol-specific transporter subunit IIBC 406509..407519 Clostridium beijerinckii NCIMB 8052 5291569 YP_001307482.1 CDS Cbei_0338 NC_009617.1 407570 408316 D PFAM: Transaldolase; KEGG: lsl:LSL_1888 transaldolase; transaldolase 407570..408316 Clostridium beijerinckii NCIMB 8052 5291570 YP_001307483.1 CDS Cbei_0339 NC_009617.1 408381 408749 D TIGRFAM: PTS system, glucitol/sorbitol-specific IIA subunit; PFAM: PTS system glucitol/sorbitol-specific IIA component; KEGG: efa:EF3305 PTS system, sorbitol-specific IIA component; PTS system glucitol/sorbitol-specific transporter subunit IIA 408381..408749 Clostridium beijerinckii NCIMB 8052 5291571 YP_001307484.1 CDS Cbei_0340 NC_009617.1 408832 409647 D Converts D-sorbitol-dphosphate to D-fructose-6-phosphate; sorbitol-6-phosphate 2-dehydrogenase 408832..409647 Clostridium beijerinckii NCIMB 8052 5291572 YP_001307485.1 CDS pgi NC_009617.1 410062 411411 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 410062..411411 Clostridium beijerinckii NCIMB 8052 5291573 YP_001307486.1 CDS Cbei_0342 NC_009617.1 411419 411850 D PFAM: protein of unknown function DUF188; KEGG: cno:NT01CX_0440 emg2 protein; hypothetical protein 411419..411850 Clostridium beijerinckii NCIMB 8052 5291574 YP_001307487.1 CDS Cbei_0343 NC_009617.1 412102 414507 D PFAM: Two component regulator three Y domain protein; KEGG: cpr:CPR_2250 two component regulator three Y motif protein; triple tyrosine motif-containing protein 412102..414507 Clostridium beijerinckii NCIMB 8052 5291575 YP_001307488.1 CDS Cbei_0344 NC_009617.1 414554 415360 D PFAM: Lytic transglycosylase, catalytic; KEGG: cac:CAC2677 lytic murein transglycosylase; lytic transglycosylase 414554..415360 Clostridium beijerinckii NCIMB 8052 5291576 YP_001307489.1 CDS Cbei_0345 NC_009617.1 415772 416488 R PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cno:NT01CX_0437 RNA pseudouridylate synthase family protein; pseudouridine synthase complement(415772..416488) Clostridium beijerinckii NCIMB 8052 5291577 YP_001307490.1 CDS Cbei_0346 NC_009617.1 416705 417370 R PFAM: nitroreductase; KEGG: bce:BC3321 NAD(P)H-dependent flavin reductase; nitroreductase complement(416705..417370) Clostridium beijerinckii NCIMB 8052 5291578 YP_001307491.1 CDS Cbei_0347 NC_009617.1 417505 417849 D PFAM: helix-turn-helix, HxlR type; KEGG: bsu:BG12143 similar to hypothetical proteins; HxlR family transcriptional regulator 417505..417849 Clostridium beijerinckii NCIMB 8052 5291579 YP_001307492.1 CDS Cbei_0348 NC_009617.1 417992 418426 D PFAM: regulatory protein, MarR; KEGG: lbl:LBL_2581 transcriptional regulator (MarR family); MarR family transcriptional regulator 417992..418426 Clostridium beijerinckii NCIMB 8052 5291580 YP_001307493.1 CDS Cbei_0349 NC_009617.1 418491 418712 D PFAM: nitrogen-fixing NifU domain protein; KEGG: pca:Pcar_2331 thioredoxin-like proteins and domains-like; NifU domain-containing protein 418491..418712 Clostridium beijerinckii NCIMB 8052 5291581 YP_001307494.1 CDS Cbei_0350 NC_009617.1 418892 420529 D PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cth:Cthe_3036 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 418892..420529 Clostridium beijerinckii NCIMB 8052 5291582 YP_001307495.1 CDS Cbei_0351 NC_009617.1 420801 423068 D PFAM: UvrD/REP helicase; KEGG: cpf:CPF_2542 ATP-dependent DNA helicase PcrA; UvrD/REP helicase 420801..423068 Clostridium beijerinckii NCIMB 8052 5291583 YP_001307496.1 CDS ligA NC_009617.1 423088 425079 D this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 423088..425079 Clostridium beijerinckii NCIMB 8052 5291584 YP_001307497.1 CDS Cbei_0353 NC_009617.1 425521 427017 D PFAM: extracellular solute-binding protein, family 5; KEGG: cno:NT01CX_0428 probable peptide ABC-type transporter periplasmic binding component; peptide ABC transporter periplasmic protein 425521..427017 Clostridium beijerinckii NCIMB 8052 5291585 YP_001307498.1 CDS Cbei_0354 NC_009617.1 427158 428870 R KEGG: cpf:CPF_2537 hypothetical protein; hypothetical protein complement(427158..428870) Clostridium beijerinckii NCIMB 8052 5291586 YP_001307499.1 CDS Cbei_0355 NC_009617.1 428994 429971 D PFAM: AIR synthase related protein domain protein; KEGG: cno:NT01CX_0426 hydrogenase maturation factor; AIR synthase-like protein 428994..429971 Clostridium beijerinckii NCIMB 8052 5291587 YP_001307500.1 CDS Cbei_0356 NC_009617.1 430185 430799 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 430185..430799 Clostridium beijerinckii NCIMB 8052 5291588 YP_001307501.1 CDS Cbei_0357 NC_009617.1 430876 431355 D TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: cpe:CPE2252 conserved hypothetical protein; phosphodiesterase 430876..431355 Clostridium beijerinckii NCIMB 8052 5291589 YP_001307502.1 CDS Cbei_0358 NC_009617.1 434073 434348 D KEGG: cpr:CPR_0719 hypothetical protein; hypothetical protein 434073..434348 Clostridium beijerinckii NCIMB 8052 5296310 YP_001307503.1 CDS Cbei_0359 NC_009617.1 434495 435151 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cac:CAC0541 SAM-dependent methyltransferase; type 12 methyltransferase 434495..435151 Clostridium beijerinckii NCIMB 8052 5291591 YP_001307504.1 CDS Cbei_0360 NC_009617.1 435678 436841 D KEGG: ctc:CTC00840 hypothetical protein; hypothetical protein 435678..436841 Clostridium beijerinckii NCIMB 8052 5291592 YP_001307505.1 CDS Cbei_0361 NC_009617.1 437138 439186 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold domain protein; KEGG: cac:CAC0903 sensory transduction histidine kinase; multi-sensor signal transduction histidine kinase 437138..439186 Clostridium beijerinckii NCIMB 8052 5291593 YP_001307506.1 CDS Cbei_0362 NC_009617.1 439289 439672 D hypothetical protein 439289..439672 Clostridium beijerinckii NCIMB 8052 5291594 YP_001307507.1 CDS Cbei_0363 NC_009617.1 439679 440308 D hypothetical protein 439679..440308 Clostridium beijerinckii NCIMB 8052 5291595 YP_001307508.1 CDS Cbei_0364 NC_009617.1 440308 440622 D hypothetical protein 440308..440622 Clostridium beijerinckii NCIMB 8052 5291596 YP_001307509.1 CDS Cbei_0365 NC_009617.1 440698 443157 D KEGG: btl:BALH_2622 glutathionylspermidine synthase; glutathionylspermidine synthase 440698..443157 Clostridium beijerinckii NCIMB 8052 5291597 YP_001307510.1 CDS Cbei_0366 NC_009617.1 443262 443471 D hypothetical protein 443262..443471 Clostridium beijerinckii NCIMB 8052 5291598 YP_001307511.1 CDS Cbei_0367 NC_009617.1 443678 445738 D PFAM: peptidase M13, neprilysin; peptidase M13; KEGG: mfl:Mfl241 membrane metallo endopeptidase; endothelin-converting protein 1 443678..445738 Clostridium beijerinckii NCIMB 8052 5291599 YP_001307512.1 CDS Cbei_0368 NC_009617.1 451183 452265 D PFAM: polysaccharide deacetylase; KEGG: cpf:CPF_0823 polysaccharide deacetylase family protein; polysaccharide deacetylase 451183..452265 Clostridium beijerinckii NCIMB 8052 5296314 YP_001307513.1 CDS Cbei_0369 NC_009617.1 452554 453939 D PFAM: peptidase U62, modulator of DNA gyrase; KEGG: cpe:CPE0339 TldD protein; C69 family peptidase 452554..453939 Clostridium beijerinckii NCIMB 8052 5291601 YP_001307514.1 CDS Cbei_0370 NC_009617.1 453942 455285 D PFAM: peptidase U62, modulator of DNA gyrase; KEGG: cpf:CPF_0324 TldD/PmbA family protein; C69 family peptidase 453942..455285 Clostridium beijerinckii NCIMB 8052 5291602 YP_001307515.1 CDS Cbei_0371 NC_009617.1 455331 456140 D PFAM: protein of unknown function DUF1113; KEGG: cpf:CPF_1398 hypothetical protein; hypothetical protein 455331..456140 Clostridium beijerinckii NCIMB 8052 5291603 YP_001307516.1 CDS Cbei_0372 NC_009617.1 456197 458080 R PFAM: sulfatase; KEGG: cpe:CPE2237 hypothetical protein; sulfatase complement(456197..458080) Clostridium beijerinckii NCIMB 8052 5291604 YP_001307517.1 CDS Cbei_0373 NC_009617.1 458370 458942 D KEGG: cpr:CPR_2206 predicted transcriptional regulator; transcriptional regulator 458370..458942 Clostridium beijerinckii NCIMB 8052 5291605 YP_001307518.1 CDS Cbei_0374 NC_009617.1 458967 459923 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cpe:CPE2235 probable monooxygenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 458967..459923 Clostridium beijerinckii NCIMB 8052 5291606 YP_001307519.1 CDS Cbei_0375 NC_009617.1 460001 460564 R PFAM: lipolytic protein, G-D-S-L family; KEGG: ctc:CTC00881 arylesterase; GDSL family lipase complement(460001..460564) Clostridium beijerinckii NCIMB 8052 5291607 YP_001307520.1 CDS Cbei_0376 NC_009617.1 460586 461284 R PFAM: endodeoxyribonuclease RusA; KEGG: cpe:CPE2233 hypothetical protein; endodeoxyribonuclease RusA complement(460586..461284) Clostridium beijerinckii NCIMB 8052 5291608 YP_001307521.1 CDS Cbei_0377 NC_009617.1 461761 462780 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 461761..462780 Clostridium beijerinckii NCIMB 8052 5291609 YP_001307522.1 CDS Cbei_0378 NC_009617.1 462790 463791 D KEGG: cpe:CPE2231 hypothetical protein; hypothetical protein 462790..463791 Clostridium beijerinckii NCIMB 8052 5291610 YP_001307523.1 CDS Cbei_0379 NC_009617.1 464057 465286 D PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: cpe:CPE2230 probable serine proteinase Do; 2-alkenal reductase 464057..465286 Clostridium beijerinckii NCIMB 8052 5291611 YP_001307524.1 CDS Cbei_0380 NC_009617.1 465486 465794 D PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: cpe:CPE2577 PTS system, cellobiose-specific II component; PTS system lactose/cellobiose-specific transporter subunit IIA 465486..465794 Clostridium beijerinckii NCIMB 8052 5291612 YP_001307525.1 CDS Cbei_0381 NC_009617.1 465807 466961 D KEGG: ctc:CTC00267 extracellular solute-binding protein; sugar ABC transporter periplasmic protein 465807..466961 Clostridium beijerinckii NCIMB 8052 5291613 YP_001307526.1 CDS Cbei_0382 NC_009617.1 467119 468237 R PFAM: glycosyl transferase, group 1; KEGG: cpf:CPF_2487 mannosyltransferase; group 1 glycosyl transferase complement(467119..468237) Clostridium beijerinckii NCIMB 8052 5291614 YP_001307527.1 CDS Cbei_0383 NC_009617.1 468367 469383 D TIGRFAM: Spore coat protein CotS; KEGG: cno:NT01CX_0586 spore coat protein S; spore coat protein CotS 468367..469383 Clostridium beijerinckii NCIMB 8052 5291615 YP_001307528.1 CDS Cbei_0384 NC_009617.1 469385 470191 D KEGG: ctc:CTC00270 spore coat protein; hypothetical protein 469385..470191 Clostridium beijerinckii NCIMB 8052 5291616 YP_001307529.1 CDS Cbei_0385 NC_009617.1 470247 471302 D TIGRFAM: Spore coat protein CotS; KEGG: cpe:CPE2220 probable spore coat protein; spore coat protein CotS 470247..471302 Clostridium beijerinckii NCIMB 8052 5291617 YP_001307530.1 CDS Cbei_0386 NC_009617.1 471626 472747 R PFAM: glycosyl transferase, group 1; KEGG: ctc:CTC00272 mannosyltransferase; group 1 glycosyl transferase complement(471626..472747) Clostridium beijerinckii NCIMB 8052 5291618 YP_001307531.1 CDS Cbei_0387 NC_009617.1 472856 473854 D TIGRFAM: Spore coat protein CotS; KEGG: cpf:CPF_2482 spore coat protein CotS; spore coat protein CotS 472856..473854 Clostridium beijerinckii NCIMB 8052 5291619 YP_001307532.1 CDS Cbei_0388 NC_009617.1 474017 474877 D PFAM: peptidase U57, YabG; KEGG: cpe:CPE2217 conserved hypothetical protein; peptidase U57, YabG 474017..474877 Clostridium beijerinckii NCIMB 8052 5291620 YP_001307533.1 CDS Cbei_0389 NC_009617.1 475116 475655 D PFAM: glutathione peroxidase; KEGG: cpr:CPR_1026 glutathione peroxidase; glutathione peroxidase 475116..475655 Clostridium beijerinckii NCIMB 8052 5291621 YP_001307534.1 CDS Cbei_0390 NC_009617.1 476271 476513 D PFAM: protein of unknown function DUF1021; KEGG: cac:CAC2904 uncharacterized protein, VEG B.subtilis ortholog; hypothetical protein 476271..476513 Clostridium beijerinckii NCIMB 8052 5291622 YP_001307535.1 CDS Cbei_0391 NC_009617.1 476977 478539 D PFAM: Peptidoglycan-binding LysM; KEGG: ctc:CTC00280 hypothetical protein; peptidoglycan-binding LysM 476977..478539 Clostridium beijerinckii NCIMB 8052 5291623 YP_001307536.1 CDS Cbei_0392 NC_009617.1 478869 479714 D TIGRFAM: cyanophycinase; PFAM: peptidase S51, dipeptidase E; KEGG: ctc:CTC00281 cyanophycinase; cyanophycinase 478869..479714 Clostridium beijerinckii NCIMB 8052 5291624 YP_001307537.1 CDS Cbei_0393 NC_009617.1 479686 482328 D catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase 479686..482328 Clostridium beijerinckii NCIMB 8052 5291625 YP_001307538.1 CDS ipk NC_009617.1 482477 483319 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 482477..483319 Clostridium beijerinckii NCIMB 8052 5291626 YP_001307539.1 CDS Cbei_0395 NC_009617.1 483383 484120 D TIGRFAM: Sporulation stage II, protein R; KEGG: ctc:CTC00288 stage II sporulation protein R; sporulation stage II, protein R 483383..484120 Clostridium beijerinckii NCIMB 8052 5291627 YP_001307540.1 CDS Cbei_0396 NC_009617.1 484252 484668 D PFAM: Domain of unknown function DUF1934; KEGG: cpf:CPF_2473 hypothetical protein; hypothetical protein 484252..484668 Clostridium beijerinckii NCIMB 8052 5291628 YP_001307541.1 CDS Cbei_0397 NC_009617.1 484774 485082 D KEGG: cno:NT01CX_0556 hypothetical protein; hypothetical protein 484774..485082 Clostridium beijerinckii NCIMB 8052 5291629 YP_001307542.1 CDS pyrG NC_009617.1 485247 486857 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 485247..486857 Clostridium beijerinckii NCIMB 8052 5291630 YP_001307543.1 CDS rho NC_009617.1 487168 488610 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 487168..488610 Clostridium beijerinckii NCIMB 8052 5291631 YP_001307544.1 CDS Cbei_0400 NC_009617.1 488651 489757 R PFAM: glycosyl transferase, group 1; Glycosyltransferase 28, C-terminal domain; Monogalactosyldiacylglycerol synthase; KEGG: cpf:CPF_2470 monogalactosyldiacylglycerol synthase; monogalactosyldiacylglycerol synthase complement(488651..489757) Clostridium beijerinckii NCIMB 8052 5291632 YP_001307545.1 CDS rpmE NC_009617.1 489971 490180 R RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(489971..490180) Clostridium beijerinckii NCIMB 8052 5291633 YP_001307546.1 CDS Cbei_0402 NC_009617.1 490370 490954 D catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 490370..490954 Clostridium beijerinckii NCIMB 8052 5291634 YP_001307547.1 CDS Cbei_0403 NC_009617.1 490980 492740 D TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; protein of unknown function DUF1385; KEGG: cpr:CPR_2177 modification methylase, HemK family; HemK family modification methylase 490980..492740 Clostridium beijerinckii NCIMB 8052 5291635 YP_001307548.1 CDS prfA NC_009617.1 492876 493958 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 492876..493958 Clostridium beijerinckii NCIMB 8052 5291636 YP_001307549.1 CDS Cbei_0405 NC_009617.1 494024 494611 D KEGG: cpf:CPF_2465 hypothetical protein; hypothetical protein 494024..494611 Clostridium beijerinckii NCIMB 8052 5291637 YP_001307550.1 CDS Cbei_0406 NC_009617.1 494685 495716 D TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC, N-terminal domain; KEGG: cpr:CPR_2174 SUA5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC/YwlC family protein 494685..495716 Clostridium beijerinckii NCIMB 8052 5291638 YP_001307551.1 CDS Cbei_0407 NC_009617.1 495722 496216 D TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; KEGG: cpr:CPR_2173 ribose 5-phosphate isomerase B; RpiB/LacA/LacB family sugar-phosphate isomerase 495722..496216 Clostridium beijerinckii NCIMB 8052 5291639 YP_001307552.1 CDS upp NC_009617.1 496366 496995 D Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 496366..496995 Clostridium beijerinckii NCIMB 8052 5291640 YP_001307553.1 CDS Cbei_0409 NC_009617.1 497077 497571 D PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: cac:CAC2876 deoxycytidylate deaminase; zinc-binding CMP/dCMP deaminase 497077..497571 Clostridium beijerinckii NCIMB 8052 5291641 YP_001307554.1 CDS Cbei_0410 NC_009617.1 497809 498999 D PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: cpr:CPR_2171 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 497809..498999 Clostridium beijerinckii NCIMB 8052 5291642 YP_001307555.1 CDS Cbei_0411 NC_009617.1 499121 500302 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase 499121..500302 Clostridium beijerinckii NCIMB 8052 5291643 YP_001307556.1 CDS Cbei_0412 NC_009617.1 501380 502069 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 501380..502069 Clostridium beijerinckii NCIMB 8052 5291644 YP_001307557.1 CDS Cbei_0413 NC_009617.1 502123 502338 D produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 502123..502338 Clostridium beijerinckii NCIMB 8052 5291645 YP_001307558.1 CDS Cbei_0414 NC_009617.1 502391 502870 D produces ATP from ADP in the presence of a proton gradient across the membrane; subunit B is part of the membrane proton channel; F0F1 ATP synthase subunit B 502391..502870 Clostridium beijerinckii NCIMB 8052 5291646 YP_001307559.1 CDS Cbei_0415 NC_009617.1 502873 503412 D Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 502873..503412 Clostridium beijerinckii NCIMB 8052 5291647 YP_001307560.1 CDS Cbei_0416 NC_009617.1 503423 504937 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 503423..504937 Clostridium beijerinckii NCIMB 8052 5291648 YP_001307561.1 CDS Cbei_0417 NC_009617.1 504979 505830 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 504979..505830 Clostridium beijerinckii NCIMB 8052 5291649 YP_001307562.1 CDS Cbei_0418 NC_009617.1 505845 507236 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 505845..507236 Clostridium beijerinckii NCIMB 8052 5291650 YP_001307563.1 CDS Cbei_0419 NC_009617.1 507252 507659 D TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+-transporting two-sector ATPase, delta/epsilon subunit; KEGG: cno:NT01CX_0529 ATP synthase F1, epsilon subunit; ATP synthase F1 subunit epsilon 507252..507659 Clostridium beijerinckii NCIMB 8052 5291651 YP_001307564.1 CDS Cbei_0420 NC_009617.1 507874 508524 D KEGG: cpf:CPF_2450 hypothetical protein; hypothetical protein 507874..508524 Clostridium beijerinckii NCIMB 8052 5291652 YP_001307565.1 CDS Cbei_0421 NC_009617.1 508686 509948 D adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 508686..509948 Clostridium beijerinckii NCIMB 8052 5291653 YP_001307566.1 CDS Cbei_0422 NC_009617.1 510516 511574 D TIGRFAM: SpoIID/LytB domain; Sporulation stage II, protein D firmicutes; PFAM: Stage II sporulation D domain protein; KEGG: ctc:CTC00315 stage II sporulation protein D; sporulation stage II protein D 510516..511574 Clostridium beijerinckii NCIMB 8052 5291654 YP_001307567.1 CDS Cbei_0423 NC_009617.1 511999 512751 D PFAM: peptidase M23B; KEGG: ctc:CTC00316 conserved membrane-associated protein; peptidase M23B 511999..512751 Clostridium beijerinckii NCIMB 8052 5291655 YP_001307568.1 CDS Cbei_0424 NC_009617.1 512859 513113 D TIGRFAM: Sporulation stage III, transcriptional regulator SpoIIID; KEGG: cpr:CPR_2156 stage III sporulation protein D; sporulation stage III, transcriptional regulator SpoIIID 512859..513113 Clostridium beijerinckii NCIMB 8052 5291656 YP_001307569.1 CDS Cbei_0425 NC_009617.1 513193 514227 D TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; KEGG: cno:NT01CX_0523 cell shape determining protein, MreB/Mrl family; rod shape-determining protein Mbl 513193..514227 Clostridium beijerinckii NCIMB 8052 5291657 YP_001307570.1 CDS Cbei_0426 NC_009617.1 514295 514831 R PFAM: protein of unknown function DUF1256; KEGG: cac:CAC2857 spore protease GPR related protein, YYAC B.subtilis ortholog; hypothetical protein complement(514295..514831) Clostridium beijerinckii NCIMB 8052 5291658 YP_001307571.1 CDS Cbei_0427 NC_009617.1 514932 515336 D KEGG: cpe:CPE2178 hypothetical protein; hypothetical protein 514932..515336 Clostridium beijerinckii NCIMB 8052 5291659 YP_001307572.1 CDS Cbei_0428 NC_009617.1 516603 517778 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 516603..517778 Clostridium beijerinckii NCIMB 8052 5296321 YP_001307573.1 CDS Cbei_0429 NC_009617.1 518230 520458 D TIGRFAM: helicase, RecD/TraA family; SMART: Helix-hairpin-helix DNA-binding, class 1; ATPase AAA; KEGG: cpr:CPR_2143 helicase, RecD/TraA family; recombinase D 518230..520458 Clostridium beijerinckii NCIMB 8052 5291661 YP_001307574.1 CDS Cbei_0430 NC_009617.1 520477 521493 D KEGG: ctc:CTC00323 hypothetical protein; hypothetical protein 520477..521493 Clostridium beijerinckii NCIMB 8052 5291662 YP_001307575.1 CDS Cbei_0431 NC_009617.1 521466 522122 D KEGG: cpf:CPF_2431 ComF protein; ComF protein 521466..522122 Clostridium beijerinckii NCIMB 8052 5291663 YP_001307576.1 CDS Cbei_0432 NC_009617.1 522538 523071 D TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: cpf:CPF_2430 ribosomal subunit interface protein; sigma 54 modulation protein/30S ribosomal protein S30EA 522538..523071 Clostridium beijerinckii NCIMB 8052 5291664 YP_001307577.1 CDS secA NC_009617.1 523416 525983 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 523416..525983 Clostridium beijerinckii NCIMB 8052 5291665 YP_001307578.1 CDS Cbei_0434 NC_009617.1 526278 527252 D catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA; peptide chain release factor 2 526278..527252 Clostridium beijerinckii NCIMB 8052 5291666 YP_001307579.1 CDS Cbei_0435 NC_009617.1 527914 528609 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cpf:CPF_1403 DNA-binding response regulator; two component transcriptional regulator 527914..528609 Clostridium beijerinckii NCIMB 8052 5291667 YP_001307580.1 CDS Cbei_0436 NC_009617.1 528599 530101 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: ctc:CTC00849 two-component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 528599..530101 Clostridium beijerinckii NCIMB 8052 5291668 YP_001307581.1 CDS Cbei_0437 NC_009617.1 530300 531211 D PFAM: peptidase M50; KEGG: dsy:DSY1792 hypothetical protein; peptidase M50 530300..531211 Clostridium beijerinckii NCIMB 8052 5291669 YP_001307582.1 CDS Cbei_0438 NC_009617.1 531394 531564 D hypothetical protein 531394..531564 Clostridium beijerinckii NCIMB 8052 5291670 YP_001307583.1 CDS Cbei_0439 NC_009617.1 531720 533897 D PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: cpr:CPR_2136 transcription accessory protein; RNA-binding S1 domain-containing protein 531720..533897 Clostridium beijerinckii NCIMB 8052 5291671 YP_001307584.1 CDS Cbei_0440 NC_009617.1 534155 535111 D PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: ooe:OEOE_0048 predicted dehydrogenase or related protein; oxidoreductase domain-containing protein 534155..535111 Clostridium beijerinckii NCIMB 8052 5291672 YP_001307585.1 CDS Cbei_0441 NC_009617.1 535137 536090 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: cac:CAC2782 predicted permease; hypothetical protein 535137..536090 Clostridium beijerinckii NCIMB 8052 5291673 YP_001307586.1 CDS Cbei_0442 NC_009617.1 536187 537167 D PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: bcl:ABC0373 transcriptional regulator, AraC/XylS family; helix-turn-helix domain-containing protein 536187..537167 Clostridium beijerinckii NCIMB 8052 5291674 YP_001307587.1 CDS Cbei_0443 NC_009617.1 537514 538407 D PFAM: ROK family protein; KEGG: cpf:CPF_2334 ROK family protein; ROK family protein 537514..538407 Clostridium beijerinckii NCIMB 8052 5291675 YP_001307588.1 CDS Cbei_0444 NC_009617.1 538563 540656 R PFAM: glutamine synthetase, catalytic region; KEGG: cth:Cthe_0863 glutamine synthetase, catalytic region; glutamine synthetase complement(538563..540656) Clostridium beijerinckii NCIMB 8052 5291676 YP_001307589.1 CDS Cbei_0445 NC_009617.1 541381 542784 D TIGRFAM: rhamnulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: bha:BH1551 rhamnulokinase; rhamnulokinase 541381..542784 Clostridium beijerinckii NCIMB 8052 5291677 YP_001307590.1 CDS Cbei_0446 NC_009617.1 542921 544177 D catalyzes the formation of L-rhamnulose from L-rhamnose; L-rhamnose isomerase 542921..544177 Clostridium beijerinckii NCIMB 8052 5291678 YP_001307591.1 CDS Cbei_0447 NC_009617.1 544306 545142 D 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase 544306..545142 Clostridium beijerinckii NCIMB 8052 5291679 YP_001307592.1 CDS Cbei_0448 NC_009617.1 545167 545949 D Involved in the metabolism of 2-deoxyglucose; 2-deoxy-D-gluconate 3-dehydrogenase 545167..545949 Clostridium beijerinckii NCIMB 8052 5291680 YP_001307593.1 CDS Cbei_0449 NC_009617.1 546348 547475 R PFAM: glycosyl hydrolase, family 88; KEGG: efa:EF0428 hypothetical protein; glycosyl hydrolase family protein complement(546348..547475) Clostridium beijerinckii NCIMB 8052 5291681 YP_001307594.1 CDS Cbei_0450 NC_009617.1 547974 548810 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: efa:EF0438 hypothetical protein; xylose isomerase domain-containing protein 547974..548810 Clostridium beijerinckii NCIMB 8052 5291682 YP_001307595.1 CDS Cbei_0451 NC_009617.1 549399 550937 D KEGG: eca:ECA3560 oligogalacturonide transporter; oligogalacturonide transporter 549399..550937 Clostridium beijerinckii NCIMB 8052 5291683 YP_001307596.1 CDS Cbei_0452 NC_009617.1 551096 551410 R TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; KEGG: msu:MS2324 uncharacterized ACR; L-rhamnose 1-epimerase complement(551096..551410) Clostridium beijerinckii NCIMB 8052 5291684 YP_001307597.1 CDS Cbei_0453 NC_009617.1 551646 552404 D PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: ecv:APECO1_839 DeoR-type transcriptional regulator; DeoR family transcriptional regulator 551646..552404 Clostridium beijerinckii NCIMB 8052 5291685 YP_001307598.1 CDS Cbei_0454 NC_009617.1 552776 553594 D PFAM: class II aldolase/adducin family protein; KEGG: msu:MS2327 ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; rhamnulose-1-phosphate aldolase 552776..553594 Clostridium beijerinckii NCIMB 8052 5291686 YP_001307599.1 CDS Cbei_0455 NC_009617.1 553934 555091 D TIGRFAM: lactaldehyde reductase; PFAM: iron-containing alcohol dehydrogenase; KEGG: cpf:CPF_1046 lactaldehyde reductase; L-1,2-propanediol oxidoreductase 553934..555091 Clostridium beijerinckii NCIMB 8052 5291687 YP_001307600.1 CDS Cbei_0456 NC_009617.1 555541 556008 D Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) in DNA. Repairs alkylated guanine in DNA by stoichiometrically transferring the alkyl group at the O-6 position to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated; methylated-DNA--protein-cysteine methyltransferase 555541..556008 Clostridium beijerinckii NCIMB 8052 5291688 YP_001307601.1 CDS Cbei_0457 NC_009617.1 556310 556927 D PFAM: regulatory protein, DeoR; KEGG: smu:SMU.507 transcriptional regulator (DeoR family); DeoR family transcriptional regulator 556310..556927 Clostridium beijerinckii NCIMB 8052 5291689 YP_001307602.1 CDS Cbei_0458 NC_009617.1 557059 557871 D TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: gfo:orf2334 haloacid dehalogenase-like hydrolase; cof family hydrolase 557059..557871 Clostridium beijerinckii NCIMB 8052 5291690 YP_001307603.1 CDS Cbei_0459 NC_009617.1 558114 558923 R PFAM: IclR family transcriptional regulator; Transcriptional regulator IclR-like; KEGG: cno:NT01CX_1476 transcription regulator (IclR family) BH2137; IclR family transcriptional regulator complement(558114..558923) Clostridium beijerinckii NCIMB 8052 5291691 YP_001307604.1 CDS Cbei_0460 NC_009617.1 559167 559949 D Involved in the metabolism of 2-deoxyglucose; 2-deoxy-D-gluconate 3-dehydrogenase 559167..559949 Clostridium beijerinckii NCIMB 8052 5291692 YP_001307605.1 CDS Cbei_0461 NC_009617.1 560086 561033 D PFAM: PfkB domain protein; KEGG: oih:OB2698 2-keto-3-deoxygluconate kinase; ribokinase-like domain-containing protein 560086..561033 Clostridium beijerinckii NCIMB 8052 5291693 YP_001307606.1 CDS Cbei_0462 NC_009617.1 561123 561749 D TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: tma:TM0066 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 561123..561749 Clostridium beijerinckii NCIMB 8052 5291694 YP_001307607.1 CDS Cbei_0463 NC_009617.1 562066 562455 D TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: cth:Cthe_3118 hemerythrin-like metal-binding protein; hemerythrin-like metal-binding protein 562066..562455 Clostridium beijerinckii NCIMB 8052 5291695 YP_001307608.1 CDS Cbei_0464 NC_009617.1 562927 563508 D KEGG: cpr:CPR_2135 conserved membrane protein, probable transporter YPAA; hypothetical protein 562927..563508 Clostridium beijerinckii NCIMB 8052 5291696 YP_001307609.1 CDS Cbei_0465 NC_009617.1 564288 564449 D PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: sfu:Sfum_3222 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 564288..564449 Clostridium beijerinckii NCIMB 8052 5291697 YP_001307610.1 CDS Cbei_0466 NC_009617.1 564646 565410 D PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: cac:CAC0113 transcriptional regulator of sugar metabolism; DeoR family transcriptional regulator 564646..565410 Clostridium beijerinckii NCIMB 8052 5291698 YP_001307611.1 CDS Cbei_0467 NC_009617.1 565563 566003 R TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: cth:Cthe_1774 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase complement(565563..566003) Clostridium beijerinckii NCIMB 8052 5291699 YP_001307612.1 CDS Cbei_0468 NC_009617.1 566003 566737 R PFAM: peptidase M22, glycoprotease; KEGG: cpe:CPE2165 probable glycoprotein endopeptidase; peptidase M22, glycoprotease complement(566003..566737) Clostridium beijerinckii NCIMB 8052 5291700 YP_001307613.1 CDS Cbei_0469 NC_009617.1 566734 567195 R PFAM: protein of unknown function UPF0079; KEGG: cpe:CPE2164 conserved hypothetical protein; hypothetical protein complement(566734..567195) Clostridium beijerinckii NCIMB 8052 5291701 YP_001307614.1 CDS Cbei_0470 NC_009617.1 567643 568545 D PFAM: periplasmic solute binding protein; KEGG: ctc:CTC02442 zinc-binding lipoprotein (adhesin B); periplasmic solute binding protein 567643..568545 Clostridium beijerinckii NCIMB 8052 5291702 YP_001307615.1 CDS Cbei_0471 NC_009617.1 569016 569396 D TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: dsy:DSY1808 hypothetical protein; endoribonuclease L-PSP 569016..569396 Clostridium beijerinckii NCIMB 8052 5296322 YP_001307616.1 CDS Cbei_0472 NC_009617.1 569494 570561 R PFAM: 2-nitropropane dioxygenase, NPD; KEGG: cpe:CPE0992 hypothetical protein; 2-nitropropane dioxygenase complement(569494..570561) Clostridium beijerinckii NCIMB 8052 5291704 YP_001307617.1 CDS Cbei_0473 NC_009617.1 571244 572260 D KEGG: pfa:PF10_0171 hypothetical protein; hypothetical protein 571244..572260 Clostridium beijerinckii NCIMB 8052 5296323 YP_001307618.1 CDS Cbei_0474 NC_009617.1 572475 572666 D PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: cpr:CPR_2128 small, acid-soluble spore protein 1; small acid-soluble spore protein, alpha/beta type 572475..572666 Clostridium beijerinckii NCIMB 8052 5291706 YP_001307619.1 CDS Cbei_0475 NC_009617.1 572898 574031 D PFAM: metallophosphoesterase; KEGG: cpf:CPF_2416 Ser/Thr protein phosphatase family protein; metallophosphoesterase 572898..574031 Clostridium beijerinckii NCIMB 8052 5291707 YP_001307620.1 CDS Cbei_0476 NC_009617.1 574133 576868 D KEGG: cpr:CPR_2126 hypothetical protein; hypothetical protein 574133..576868 Clostridium beijerinckii NCIMB 8052 5291708 YP_001307621.1 CDS Cbei_0477 NC_009617.1 576978 577874 D PFAM: periplasmic solute binding protein; KEGG: cpf:CPF_2413 ABC transporter substrate-binding protein; periplasmic solute binding protein 576978..577874 Clostridium beijerinckii NCIMB 8052 5291709 YP_001307622.1 CDS Cbei_0478 NC_009617.1 578373 580163 D PFAM: DNA mismatch repair protein MutS domain protein; KEGG: cpr:CPR_2123 MutS domain protein; DNA mismatch repair protein MutS domain-containing protein 578373..580163 Clostridium beijerinckii NCIMB 8052 5291710 YP_001307623.1 CDS Cbei_0479 NC_009617.1 580211 581122 D PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: cpr:CPR_2121 exonuclease family protein; exonuclease 580211..581122 Clostridium beijerinckii NCIMB 8052 5291711 YP_001307624.1 CDS Cbei_0480 NC_009617.1 581241 581690 D PFAM: CBS domain containing protein; KEGG: cpr:CPR_2120 two CBS domain containing protein; hypothetical protein 581241..581690 Clostridium beijerinckii NCIMB 8052 5291712 YP_001307625.1 CDS Cbei_0481 NC_009617.1 581877 582536 R KEGG: cac:CAC0312 hypothetical protein; hypothetical protein complement(581877..582536) Clostridium beijerinckii NCIMB 8052 5291713 YP_001307626.1 CDS Cbei_0482 NC_009617.1 582547 583197 R PFAM: PspA/IM30 family protein; KEGG: cac:CAC0313 phage shock protein A; phage shock protein A complement(582547..583197) Clostridium beijerinckii NCIMB 8052 5291714 YP_001307627.1 CDS Cbei_0483 NC_009617.1 583219 583896 R KEGG: rno:689513 hypothetical protein LOC689513; hypothetical protein complement(583219..583896) Clostridium beijerinckii NCIMB 8052 5291715 YP_001307628.1 CDS rpsA NC_009617.1 584264 585418 D in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 584264..585418 Clostridium beijerinckii NCIMB 8052 5291716 YP_001307629.1 CDS Cbei_0485 NC_009617.1 585491 586909 R TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; KEGG: cpf:CPF_2404 pyruvate kinase; pyruvate kinase complement(585491..586909) Clostridium beijerinckii NCIMB 8052 5291717 YP_001307630.1 CDS Cbei_0486 NC_009617.1 587073 588530 D TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: cpf:CPF_2403 aminoacyl-histidine dipeptidase; aminoacyl-histidine dipeptidase 587073..588530 Clostridium beijerinckii NCIMB 8052 5291718 YP_001307631.1 CDS Cbei_0487 NC_009617.1 588897 589490 D PFAM: NLP/P60 protein; KEGG: ctc:CTC02078 hypothetical lipoprotein; NLP/P60 protein 588897..589490 Clostridium beijerinckii NCIMB 8052 5291719 YP_001307632.1 CDS Cbei_0488 NC_009617.1 589833 590507 D KEGG: cno:NT01CX_1684 hypothetical protein; hypothetical protein 589833..590507 Clostridium beijerinckii NCIMB 8052 5291720 YP_001307633.1 CDS Cbei_0489 NC_009617.1 590802 591368 D Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 590802..591368 Clostridium beijerinckii NCIMB 8052 5291721 YP_001307634.1 CDS radC NC_009617.1 591420 592109 D Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 591420..592109 Clostridium beijerinckii NCIMB 8052 5291722 YP_001307635.1 CDS Cbei_0491 NC_009617.1 592130 593146 D functions in MreBCD complex in some organisms; rod shape-determining protein MreB 592130..593146 Clostridium beijerinckii NCIMB 8052 5291723 YP_001307636.1 CDS Cbei_0492 NC_009617.1 593149 593997 D in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 593149..593997 Clostridium beijerinckii NCIMB 8052 5291724 YP_001307637.1 CDS Cbei_0493 NC_009617.1 594007 594498 D KEGG: cpr:CPR_2108 rod shape-determining protein MreD; rod shape-determining protein MreD 594007..594498 Clostridium beijerinckii NCIMB 8052 5291725 YP_001307638.1 CDS Cbei_0494 NC_009617.1 594495 597392 D PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: cpr:CPR_2107 penicillin-binding protein dimerisation domain family; penicillin-binding protein, transpeptidase 594495..597392 Clostridium beijerinckii NCIMB 8052 5291726 YP_001307639.1 CDS Cbei_0495 NC_009617.1 597550 598230 D Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A 597550..598230 Clostridium beijerinckii NCIMB 8052 5291727 YP_001307640.1 CDS minC NC_009617.1 598430 599089 D blocks the formation of polar Z-ring septums; septum formation inhibitor 598430..599089 Clostridium beijerinckii NCIMB 8052 5291728 YP_001307641.1 CDS Cbei_0497 NC_009617.1 599110 599910 D TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: cpr:CPR_2105 septum site-determining protein MinD; septum site-determining protein MinD 599110..599910 Clostridium beijerinckii NCIMB 8052 5291729 YP_001307642.1 CDS Cbei_0498 NC_009617.1 599925 600194 D works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 599925..600194 Clostridium beijerinckii NCIMB 8052 5291730 YP_001307643.1 CDS Cbei_0499 NC_009617.1 600464 601594 D PFAM: cell cycle protein; KEGG: cpe:CPE2136 stage V sporulation protein E; cell cycle protein 600464..601594 Clostridium beijerinckii NCIMB 8052 5291731 YP_001307644.1 CDS Cbei_0500 NC_009617.1 602012 602488 D KEGG: cno:NT01CX_0087 cell wall endopeptidase, family M23/M37; hypothetical protein 602012..602488 Clostridium beijerinckii NCIMB 8052 5291732 YP_001307645.1 CDS Cbei_0501 NC_009617.1 602608 603465 D PFAM: peptidase M50; KEGG: cno:NT01CX_0086 sterol-regulatory element binding protein (SREBP) site 2 protease; peptidase M50 602608..603465 Clostridium beijerinckii NCIMB 8052 5291733 YP_001307646.1 CDS Cbei_0502 NC_009617.1 603663 604262 D KEGG: cpr:CPR_1376 hypothetical protein; hypothetical protein 603663..604262 Clostridium beijerinckii NCIMB 8052 5291734 YP_001307647.1 CDS Cbei_0503 NC_009617.1 604514 606604 D PFAM: S-layer domain protein domain protein; Propeptide, PepSY amd peptidase M4; KEGG: cth:Cthe_2168 propeptide, PepSY amd peptidase M4; S-layer protein 604514..606604 Clostridium beijerinckii NCIMB 8052 5291735 YP_001307648.1 CDS Cbei_0504 NC_009617.1 606771 611006 D KEGG: mpe:MYPE1550 predicted cytoskeletal protein; hypothetical protein 606771..611006 Clostridium beijerinckii NCIMB 8052 5291736 YP_001307649.1 CDS Cbei_0505 NC_009617.1 611267 613123 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cpr:CPR_2100 radical SAM domain protein; radical SAM domain-containing protein 611267..613123 Clostridium beijerinckii NCIMB 8052 5291737 YP_001307650.1 CDS Cbei_0506 NC_009617.1 613107 613808 D KEGG: cpe:CPE2132 hypothetical protein; hypothetical protein 613107..613808 Clostridium beijerinckii NCIMB 8052 5291738 YP_001307651.1 CDS Cbei_0507 NC_009617.1 613999 615447 D TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: cpf:CPF_2386 ribonuclease, Rne/Rng family; ribonuclease 613999..615447 Clostridium beijerinckii NCIMB 8052 5291739 YP_001307652.1 CDS rplU NC_009617.1 615623 615934 D PFAM: ribosomal protein L21; KEGG: cpr:CPR_2097 ribosomal protein L21; 50S ribosomal protein L21 615623..615934 Clostridium beijerinckii NCIMB 8052 5291740 YP_001307653.1 CDS Cbei_0509 NC_009617.1 615942 616328 D PFAM: protein of unknown function DUF464; KEGG: cpf:CPF_2384 hypothetical protein; hypothetical protein 615942..616328 Clostridium beijerinckii NCIMB 8052 5291741 YP_001307654.1 CDS rpmA NC_009617.1 616333 616632 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 616333..616632 Clostridium beijerinckii NCIMB 8052 5291742 YP_001307655.1 CDS obgE NC_009617.1 616934 618226 D essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 616934..618226 Clostridium beijerinckii NCIMB 8052 5291743 YP_001307656.1 CDS Cbei_0512 NC_009617.1 618374 618676 D PFAM: protein of unknown function UPF0044; KEGG: cpr:CPR_2093 RNA-binding protein; hypothetical protein 618374..618676 Clostridium beijerinckii NCIMB 8052 5291744 YP_001307657.1 CDS nadD NC_009617.1 618839 619453 D transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 618839..619453 Clostridium beijerinckii NCIMB 8052 5291745 YP_001307658.1 CDS Cbei_0514 NC_009617.1 619540 620118 D PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cpr:CPR_2091 HD domain protein; metal dependent phosphohydrolase 619540..620118 Clostridium beijerinckii NCIMB 8052 5291746 YP_001307659.1 CDS Cbei_0515 NC_009617.1 620218 621510 D TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: cpr:CPR_2090 transcription regulator LytR-like protein lin0463; cell envelope-related transcriptional attenuator 620218..621510 Clostridium beijerinckii NCIMB 8052 5291747 YP_001307660.1 CDS Cbei_0516 NC_009617.1 621712 622611 D TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; KEGG: cpe:CPE2122 conserved hypothetical protein; RluA family pseudouridine synthase 621712..622611 Clostridium beijerinckii NCIMB 8052 5291748 YP_001307661.1 CDS Cbei_0517 NC_009617.1 622686 623660 R PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: cac:CAC0023 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(622686..623660) Clostridium beijerinckii NCIMB 8052 5291749 YP_001307662.1 CDS Cbei_0518 NC_009617.1 623704 624789 D catalyzes the formation of aspartate semialdehyde from aspartyl phosphate; aspartate-semialdehyde dehydrogenase 623704..624789 Clostridium beijerinckii NCIMB 8052 5291750 YP_001307663.1 CDS Cbei_0519 NC_009617.1 624853 626088 R PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; KEGG: cno:NT01CX_0071 D-alanyl-D-alanine carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase complement(624853..626088) Clostridium beijerinckii NCIMB 8052 5291751 YP_001307664.1 CDS Cbei_0520 NC_009617.1 626254 626940 D TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; KEGG: cpf:CPF_2375 ComE operon protein 1; helix-hairpin-helix repeat-containing competence protein ComEA 626254..626940 Clostridium beijerinckii NCIMB 8052 5291752 YP_001307665.1 CDS Cbei_0521 NC_009617.1 627218 627910 D hypothetical protein 627218..627910 Clostridium beijerinckii NCIMB 8052 5291753 YP_001307666.1 CDS Cbei_0522 NC_009617.1 627931 628329 D hypothetical protein 627931..628329 Clostridium beijerinckii NCIMB 8052 5291754 YP_001307667.1 CDS Cbei_0523 NC_009617.1 628440 629798 D TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; DNA methylase N-4/N-6 domain protein; conserved hypothetical protein 95; methyltransferase small; (Uracil-5)-methyltransferase; KEGG: cpf:CPF_2370 23S rRNA (uracil-5-)-methyltransferase RumA; RNA methyltransferase 628440..629798 Clostridium beijerinckii NCIMB 8052 5291755 YP_001307668.1 CDS Cbei_0524 NC_009617.1 630782 632806 D PFAM: PRD domain protein; Helix-turn-helix, type 11 domain protein; KEGG: tte:TTE0598 transcriptional regulator; transcriptional antiterminator BglG 630782..632806 Clostridium beijerinckii NCIMB 8052 5291756 YP_001307669.1 CDS Cbei_0525 NC_009617.1 632825 633253 D PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: gka:GK2018 hypothetical protein; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 632825..633253 Clostridium beijerinckii NCIMB 8052 5291757 YP_001307670.1 CDS frcK NC_009617.1 633247 634005 D KEGG: vpa:VPA0504 hypothetical protein; fructose transport system kinase 633247..634005 Clostridium beijerinckii NCIMB 8052 5291758 YP_001307671.1 CDS Cbei_0527 NC_009617.1 634005 635450 D TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphotransferase system, EIIC; phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: vpa:VPA0501 mannitol-specific PTS system enzyme II component; PTS system mannitol-specific transporter subunit IIC 634005..635450 Clostridium beijerinckii NCIMB 8052 5291759 YP_001307672.1 CDS Cbei_0528 NC_009617.1 635472 636719 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: vpa:VPA0502 oxidoreductase; alcohol dehydrogenase 635472..636719 Clostridium beijerinckii NCIMB 8052 5291760 YP_001307673.1 CDS Cbei_0529 NC_009617.1 636881 637588 D PFAM: ribulose-phosphate 3-epimerase; KEGG: ctc:CTC01227 ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 636881..637588 Clostridium beijerinckii NCIMB 8052 5291761 YP_001307674.1 CDS Cbei_0530 NC_009617.1 637590 638150 D PFAM: sugar isomerase (SIS); KEGG: bsu:BG11182 6-phospho-3-hexuloisomerase; sugar isomerase (SIS) 637590..638150 Clostridium beijerinckii NCIMB 8052 5291762 YP_001307675.1 CDS Cbei_0531 NC_009617.1 638171 639352 D PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain; KEGG: bld:BLi00507 mannitol-1-phosphate dehydrogenase; RBL03232; mannitol dehydrogenase domain-containing protein 638171..639352 Clostridium beijerinckii NCIMB 8052 5291763 YP_001307676.1 CDS Cbei_0532 NC_009617.1 640021 642012 D TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; KEGG: cac:CAC1348 transketolase, TKT; transketolase 640021..642012 Clostridium beijerinckii NCIMB 8052 5291764 YP_001307677.1 CDS Cbei_0533 NC_009617.1 642299 642466 D KEGG: cth:Cthe_1700 recombinase; recombinase 642299..642466 Clostridium beijerinckii NCIMB 8052 5291765 YP_001307678.1 CDS Cbei_0534 NC_009617.1 642607 643284 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dsy:DSY3639 hypothetical protein; two component transcriptional regulator 642607..643284 Clostridium beijerinckii NCIMB 8052 5291766 YP_001307679.1 CDS Cbei_0535 NC_009617.1 643281 644354 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: dsy:DSY3638 hypothetical protein; integral membrane sensor signal transduction histidine kinase 643281..644354 Clostridium beijerinckii NCIMB 8052 5291767 YP_001307680.1 CDS Cbei_0536 NC_009617.1 644608 645987 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: lwe:lwe0973 MatE family efflux protein; MATE efflux family protein 644608..645987 Clostridium beijerinckii NCIMB 8052 5291768 YP_001307681.1 CDS Cbei_0537 NC_009617.1 646716 647081 D PFAM: response regulator receiver; KEGG: swo:Swol_0863 response regulator receiver protein; response regulator receiver protein 646716..647081 Clostridium beijerinckii NCIMB 8052 5291769 YP_001307682.1 CDS Cbei_0538 NC_009617.1 647395 647652 D hypothetical protein 647395..647652 Clostridium beijerinckii NCIMB 8052 5291770 YP_001307683.1 CDS Cbei_0539 NC_009617.1 648029 648436 R hypothetical protein complement(648029..648436) Clostridium beijerinckii NCIMB 8052 5291771 YP_001307684.1 CDS Cbei_0540 NC_009617.1 648740 651622 D PFAM: sigma-54 factor, interaction domain-containing protein; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PTS system fructose subfamily IIA component; PRD domain protein; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; KEGG: tte:TTE0180 NtrC family transcriptional regulator, ATPase domain; sigma-54 factor interaction domain-containing protein 648740..651622 Clostridium beijerinckii NCIMB 8052 5291772 YP_001307685.1 CDS Cbei_0541 NC_009617.1 651641 652087 D PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: lwe:lwe0346 PTS system, IIA component; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 651641..652087 Clostridium beijerinckii NCIMB 8052 5291773 YP_001307686.1 CDS Cbei_0542 NC_009617.1 652146 652448 D KEGG: lwe:lwe0348 PTS system, galactitol-specific IIB component; PTS system galactitol-specific transporter subunit IIB 652146..652448 Clostridium beijerinckii NCIMB 8052 5291774 YP_001307687.1 CDS Cbei_0543 NC_009617.1 652480 653898 D PFAM: PTS system Galactitol-specific IIC component; KEGG: lwe:lwe0349 PTS system, galactitol-specific IIC component; PTS system galactitol-specific transporter subunit IIC 652480..653898 Clostridium beijerinckii NCIMB 8052 5291775 YP_001307688.1 CDS Cbei_0544 NC_009617.1 654305 655351 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: lmf:LMOf2365_0535 alcohol dehydrogenase, zinc-dependent; alcohol dehydrogenase 654305..655351 Clostridium beijerinckii NCIMB 8052 5291776 YP_001307689.1 CDS Cbei_0545 NC_009617.1 655365 656183 D PFAM: Transketolase domain protein; KEGG: cpf:CPF_0292 transketolase, N-terminal subunit; transketolase domain-containing protein 655365..656183 Clostridium beijerinckii NCIMB 8052 5291777 YP_001307690.1 CDS Cbei_0546 NC_009617.1 656183 657100 D PFAM: Transketolase, central region; Transketolase domain protein; KEGG: cpr:CPR_0288 transketolase; transketolase, central region 656183..657100 Clostridium beijerinckii NCIMB 8052 5291778 YP_001307691.1 CDS Cbei_0547 NC_009617.1 657116 657775 D PFAM: ribulose-phosphate 3-epimerase; KEGG: tte:TTE1498 Pentose-5-phosphate-3-epimerase; ribulose-phosphate 3-epimerase 657116..657775 Clostridium beijerinckii NCIMB 8052 5291779 YP_001307692.1 CDS Cbei_0548 NC_009617.1 657807 658250 D TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; KEGG: tte:TTE0146 ribose 5-phosphate isomerase B; RpiB/LacA/LacB family sugar-phosphate isomerase 657807..658250 Clostridium beijerinckii NCIMB 8052 5291780 YP_001307693.1 CDS araD NC_009617.1 658277 658966 D catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 658277..658966 Clostridium beijerinckii NCIMB 8052 5291781 YP_001307694.1 CDS Cbei_0550 NC_009617.1 659070 660635 D PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: lwe:lwe1891 phosphoglucomutase/phosphomannomutase family protein; phosphomannomutase 659070..660635 Clostridium beijerinckii NCIMB 8052 5291782 YP_001307695.1 CDS Cbei_0552 NC_009617.1 661750 662583 D KEGG: mst:Msp_0992 endonuclease IV; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease, family 2; apurinic endonuclease Apn1 661750..662583 Clostridium beijerinckii NCIMB 8052 5296324 YP_001307696.1 CDS Cbei_0553 NC_009617.1 662757 663437 D PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: cpe:CPE1567 probable peptidyl-prolyl cis-trans isomerase B; peptidyl-prolyl isomerase 662757..663437 Clostridium beijerinckii NCIMB 8052 5291784 YP_001307697.1 CDS Cbei_0554 NC_009617.1 663537 665333 R PFAM: carbon starvation protein CstA; KEGG: cac:CAC1669 carbon starvation protein; carbon starvation protein CstA complement(663537..665333) Clostridium beijerinckii NCIMB 8052 5291785 YP_001307698.1 CDS Cbei_0555 NC_009617.1 665554 666747 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type, transmembrane region; KEGG: ctc:CTC01978 two-component sensor histidine kinase; signal transduction histidine kinase LytS 665554..666747 Clostridium beijerinckii NCIMB 8052 5291786 YP_001307699.1 CDS Cbei_0556 NC_009617.1 666775 667533 D PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: ctc:CTC01979 transcriptional regulatory protein; LytTR family two component transcriptional regulator 666775..667533 Clostridium beijerinckii NCIMB 8052 5291787 YP_001307700.1 CDS Cbei_0557 NC_009617.1 667762 668130 R PFAM: regulatory protein, MerR; Transcription regulator MerR, DNA binding; KEGG: cac:CA_P0107 HTH transcriptional regulator MerR family; MerR family transcriptional regulator complement(667762..668130) Clostridium beijerinckii NCIMB 8052 5291788 YP_001307701.1 CDS Cbei_0558 NC_009617.1 668438 669595 D PFAM: aldo/keto reductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mma:MM1948 oxidoreductase, aldo/keto reductase family; aldo/keto reductase 668438..669595 Clostridium beijerinckii NCIMB 8052 5291789 YP_001307702.1 CDS Cbei_0559 NC_009617.1 669777 671183 D PFAM: protein of unknown function DUF111; KEGG: cac:CAC0774 hypothetical protein; hypothetical protein 669777..671183 Clostridium beijerinckii NCIMB 8052 5291790 YP_001307703.1 CDS Cbei_0560 NC_009617.1 671239 672063 D PFAM: ExsB family protein; PP-loop domain protein; KEGG: cac:CAC0775 ATP-utilizing enzyme of the PP-loop superfamily; ExsB family protein 671239..672063 Clostridium beijerinckii NCIMB 8052 5291791 YP_001307704.1 CDS Cbei_0561 NC_009617.1 672132 672878 D KEGG: cac:CAC0776 NCAIR mutase (PurE)-related protein; NCAIR mutase (PurE)-like protein 672132..672878 Clostridium beijerinckii NCIMB 8052 5291792 YP_001307705.1 CDS Cbei_0562 NC_009617.1 672996 674036 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: tte:TTE0012 NADH:flavin oxidoreductases, Old Yellow Enzyme family; NADH:flavin oxidoreductase 672996..674036 Clostridium beijerinckii NCIMB 8052 5291793 YP_001307706.1 CDS Cbei_0563 NC_009617.1 674151 674297 D KEGG: cac:CAC0143 hypothetical protein; hypothetical protein 674151..674297 Clostridium beijerinckii NCIMB 8052 5291794 YP_001307707.1 CDS Cbei_0564 NC_009617.1 674452 674877 D hypothetical protein 674452..674877 Clostridium beijerinckii NCIMB 8052 5291795 YP_001307708.1 CDS Cbei_0565 NC_009617.1 674960 675097 D KEGG: cpf:CPF_1219 hypothetical protein; hypothetical protein 674960..675097 Clostridium beijerinckii NCIMB 8052 5291796 YP_001307709.1 CDS Cbei_0566 NC_009617.1 675552 677480 D PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: cac:CAC0579 serine protein kinase (PrkA protein), P-loop containing; serine protein kinase PrkA 675552..677480 Clostridium beijerinckii NCIMB 8052 5291797 YP_001307710.1 CDS Cbei_0567 NC_009617.1 677489 678661 D TIGRFAM: Sporulation protein YhbH; PFAM: protein of unknown function DUF444; KEGG: cpe:CPE1333 hypothetical protein; hypothetical protein 677489..678661 Clostridium beijerinckii NCIMB 8052 5291798 YP_001307711.1 CDS Cbei_0568 NC_009617.1 678666 680036 D PFAM: SpoVR family protein; KEGG: cpf:CPF_1539 stage V sporulation protein R; SpoVR family protein 678666..680036 Clostridium beijerinckii NCIMB 8052 5291799 YP_001307712.1 CDS Cbei_0569 NC_009617.1 680187 680729 D PFAM: Rubrerythrin; KEGG: cpr:CPR_1331 rubrerythrin; rubrerythrin 680187..680729 Clostridium beijerinckii NCIMB 8052 5291800 YP_001307713.1 CDS Cbei_0570 NC_009617.1 680741 681097 D hypothetical protein 680741..681097 Clostridium beijerinckii NCIMB 8052 5291801 YP_001307714.1 CDS Cbei_0571 NC_009617.1 681183 681527 D KEGG: cpe:CPE1330 hypothetical protein; hypothetical protein 681183..681527 Clostridium beijerinckii NCIMB 8052 5291802 YP_001307715.1 CDS Cbei_0572 NC_009617.1 681597 682124 R TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cpr:CPR_1329 CDP-diacylglycerol--serine O-phosphatidyltransferase; CDP-diacylglycerol--serine O-phosphatidyltransferase complement(681597..682124) Clostridium beijerinckii NCIMB 8052 5291803 YP_001307716.1 CDS Cbei_0573 NC_009617.1 682422 683300 D similar to YegS from E. coli; lipid kinase 682422..683300 Clostridium beijerinckii NCIMB 8052 5291804 YP_001307717.1 CDS Cbei_0574 NC_009617.1 683352 684017 D KEGG: cno:NT01CX_1387 hypothetical protein; hypothetical protein 683352..684017 Clostridium beijerinckii NCIMB 8052 5291805 YP_001307718.1 CDS Cbei_0575 NC_009617.1 684191 686194 R PFAM: Radical SAM N-terminal domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cno:NT01CX_1388 radical SAM domain protein; hypothetical protein complement(684191..686194) Clostridium beijerinckii NCIMB 8052 5291806 YP_001307719.1 CDS Cbei_0576 NC_009617.1 686755 688002 D PFAM: CBS domain containing protein; MgtE intracellular region; PRC-barrel domain protein; KEGG: cpf:CPF_1530 CBS domain/MgtE intracellular domain protein; MgtE integral membrane protein 686755..688002 Clostridium beijerinckii NCIMB 8052 5291807 YP_001307720.1 CDS Cbei_0577 NC_009617.1 688574 689485 D TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein, beta subunit; KEGG: cpr:CPR_1322 cysteine synthase A; cysteine synthase 688574..689485 Clostridium beijerinckii NCIMB 8052 5291808 YP_001307721.1 CDS Cbei_0578 NC_009617.1 689626 690216 D TIGRFAM: serine O-acetyltransferase; KEGG: cpr:CPR_1321 serine O-acetyltransferase; serine O-acetyltransferase 689626..690216 Clostridium beijerinckii NCIMB 8052 5291809 YP_001307722.1 CDS Cbei_0579 NC_009617.1 690743 691447 D PFAM: phospholipid/glycerol acyltransferase; KEGG: ctc:CTC00354 1-acyl-sn-glycerol-3-phosphate acyltransferase; phospholipid/glycerol acyltransferase 690743..691447 Clostridium beijerinckii NCIMB 8052 5291810 YP_001307723.1 CDS Cbei_0580 NC_009617.1 691464 692096 D TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; KEGG: cpr:CPR_1318 endonuclease III; endonuclease III 691464..692096 Clostridium beijerinckii NCIMB 8052 5291811 YP_001307724.1 CDS ddl NC_009617.1 692252 693157 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 692252..693157 Clostridium beijerinckii NCIMB 8052 5291812 YP_001307725.1 CDS Cbei_0582 NC_009617.1 693325 693738 R PFAM: ferric-uptake regulator; KEGG: cac:CAC0951 ferric uptake regulation protein; ferric uptake regulator family protein complement(693325..693738) Clostridium beijerinckii NCIMB 8052 5291813 YP_001307726.1 CDS Cbei_0583 NC_009617.1 693796 694347 R KEGG: cac:CAC0950 predicted membrane protein; membrane protein complement(693796..694347) Clostridium beijerinckii NCIMB 8052 5291814 YP_001307727.1 CDS Cbei_0584 NC_009617.1 694536 695753 D catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 694536..695753 Clostridium beijerinckii NCIMB 8052 5291815 YP_001307728.1 CDS Cbei_0585 NC_009617.1 695918 697222 R PFAM: aminotransferase, class V; KEGG: cpf:CPF_1720 aminotransferase, class V; cysteine desulfurase complement(695918..697222) Clostridium beijerinckii NCIMB 8052 5291816 YP_001307729.1 CDS Cbei_0586 NC_009617.1 697387 697866 D hypothetical protein 697387..697866 Clostridium beijerinckii NCIMB 8052 5291817 YP_001307730.1 CDS Cbei_0587 NC_009617.1 697977 698591 R PFAM: regulatory protein, TetR; KEGG: bld:BLi02242 TetR; TetR family transcriptional regulator complement(697977..698591) Clostridium beijerinckii NCIMB 8052 5291818 YP_001307731.1 CDS Cbei_0588 NC_009617.1 698852 700771 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_1721 ABC transporter ATP-binding protein; ABC transporter 698852..700771 Clostridium beijerinckii NCIMB 8052 5291819 YP_001307732.1 CDS Cbei_0589 NC_009617.1 701123 701830 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ctc:CTC00805 two-component response regulator; two component transcriptional regulator 701123..701830 Clostridium beijerinckii NCIMB 8052 5291820 YP_001307733.1 CDS Cbei_0590 NC_009617.1 701820 703328 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: ctc:CTC00806 sensory transduction protein kinase; integral membrane sensor signal transduction histidine kinase 701820..703328 Clostridium beijerinckii NCIMB 8052 5291821 YP_001307734.1 CDS Cbei_0591 NC_009617.1 703407 704348 D PFAM: glycoside hydrolase, family 25; KEGG: cpe:CPE1314 muramidase; glycoside hydrolase 703407..704348 Clostridium beijerinckii NCIMB 8052 5291822 YP_001307735.1 CDS Cbei_0592 NC_009617.1 704537 706033 D PFAM: VanW family protein; G5 domain protein; KEGG: cpe:CPE1313 hypothetical protein; VanW family protein 704537..706033 Clostridium beijerinckii NCIMB 8052 5291823 YP_001307736.1 CDS Cbei_0593 NC_009617.1 706279 706767 D PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: cpf:CPF_1518 RNA methyltransferase, TrmH family, group 2; tRNA/rRNA methyltransferase SpoU 706279..706767 Clostridium beijerinckii NCIMB 8052 5291824 YP_001307737.1 CDS Cbei_0594 NC_009617.1 706788 707624 D TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: cpr:CPR_1307 DegV family protein; degV family protein 706788..707624 Clostridium beijerinckii NCIMB 8052 5291825 YP_001307738.1 CDS Cbei_0595 NC_009617.1 707868 709259 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 707868..709259 Clostridium beijerinckii NCIMB 8052 5291826 YP_001307739.1 CDS Cbei_0596 NC_009617.1 709642 710691 D PFAM: sugar-binding domain protein; KEGG: cpe:CPE1305 probable transcriptional regulator; DeoR family transcriptional regulator 709642..710691 Clostridium beijerinckii NCIMB 8052 5291827 YP_001307740.1 CDS Cbei_0597 NC_009617.1 710763 711764 D TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: cpr:CPR_1301 glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase, type I 710763..711764 Clostridium beijerinckii NCIMB 8052 5291828 YP_001307741.1 CDS pgk NC_009617.1 711905 713080 D Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 711905..713080 Clostridium beijerinckii NCIMB 8052 5291829 YP_001307742.1 CDS tpiA NC_009617.1 713513 714259 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 713513..714259 Clostridium beijerinckii NCIMB 8052 5291830 YP_001307743.1 CDS Cbei_0600 NC_009617.1 714589 716127 D catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 714589..716127 Clostridium beijerinckii NCIMB 8052 5291831 YP_001307744.1 CDS Cbei_0601 NC_009617.1 716507 717112 D KEGG: cpf:CPF_2245 hypothetical protein; hypothetical protein 716507..717112 Clostridium beijerinckii NCIMB 8052 5291832 YP_001307745.1 CDS eno NC_009617.1 717501 718793 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 717501..718793 Clostridium beijerinckii NCIMB 8052 5291833 YP_001307746.1 CDS secG NC_009617.1 719014 719247 D TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: cpr:CPR_1293 preprotein translocase, SecG subunit; preprotein translocase subunit SecG 719014..719247 Clostridium beijerinckii NCIMB 8052 5291834 YP_001307747.1 CDS Cbei_0604 NC_009617.1 719882 720880 D PFAM: NMT1/THI5 like; SMART: extracellular solute-binding protein, family 3; KEGG: cth:Cthe_1570 extracellular solute-binding protein, family 3; NMT1/THI5-like protein 719882..720880 Clostridium beijerinckii NCIMB 8052 5291835 YP_001307748.1 CDS Cbei_0605 NC_009617.1 720900 721952 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cth:Cthe_1571 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 720900..721952 Clostridium beijerinckii NCIMB 8052 5291836 YP_001307749.1 CDS Cbei_0606 NC_009617.1 721949 722749 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cth:Cthe_1572 ABC transporter protein; ABC transporter 721949..722749 Clostridium beijerinckii NCIMB 8052 5291837 YP_001307750.1 CDS Cbei_0607 NC_009617.1 722763 725084 D TIGRFAM: ATPase P; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: cth:Cthe_1848 copper-translocating P-type ATPase; heavy metal translocating P-type ATPase 722763..725084 Clostridium beijerinckii NCIMB 8052 5291838 YP_001307751.1 CDS Cbei_0608 NC_009617.1 725084 726154 D KEGG: cth:Cthe_1849 heavy metal transport/detoxification protein; heavy metal transport/detoxification protein 725084..726154 Clostridium beijerinckii NCIMB 8052 5291839 YP_001307752.1 CDS Cbei_0609 NC_009617.1 726500 727789 D TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: bth:BT_2387 O-acetylhomoserine (thiol)-lyase; O-acetylhomoserine/O-acetylserine sulfhydrylase 726500..727789 Clostridium beijerinckii NCIMB 8052 5291840 YP_001307753.1 CDS Cbei_0610 NC_009617.1 728005 728874 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY1353 hypothetical protein; ABC transporter 728005..728874 Clostridium beijerinckii NCIMB 8052 5291841 YP_001307754.1 CDS Cbei_0611 NC_009617.1 729094 730083 D KEGG: cth:Cthe_1570 extracellular solute-binding protein, family 3; nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein 729094..730083 Clostridium beijerinckii NCIMB 8052 5291842 YP_001307755.1 CDS Cbei_0612 NC_009617.1 730295 731854 D PFAM: oxidoreductase/nitrogenase, component 1; KEGG: rru:Rru_A0794 nitrogenase; nitrogenase 730295..731854 Clostridium beijerinckii NCIMB 8052 5291843 YP_001307756.1 CDS Cbei_0613 NC_009617.1 731873 733240 D PFAM: oxidoreductase/nitrogenase, component 1; KEGG: rru:Rru_A0793 nitrogenase; nitrogenase 731873..733240 Clostridium beijerinckii NCIMB 8052 5291844 YP_001307757.1 CDS Cbei_0614 NC_009617.1 733301 734062 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msm:MSMEG_1161 taurine transport system permease TauC; binding-protein-dependent transport system inner membrane protein 733301..734062 Clostridium beijerinckii NCIMB 8052 5291845 YP_001307758.1 CDS Cbei_0615 NC_009617.1 734091 734876 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro04945 ABC transporter permease component; binding-protein-dependent transport system inner membrane protein 734091..734876 Clostridium beijerinckii NCIMB 8052 5291846 YP_001307759.1 CDS Cbei_0616 NC_009617.1 734901 735995 D KEGG: dsy:DSY1354 hypothetical protein; nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein 734901..735995 Clostridium beijerinckii NCIMB 8052 5291847 YP_001307760.1 CDS Cbei_0617 NC_009617.1 735995 736930 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsy:DSY1355 hypothetical protein; binding-protein-dependent transport system inner membrane protein 735995..736930 Clostridium beijerinckii NCIMB 8052 5291848 YP_001307761.1 CDS Cbei_0618 NC_009617.1 736984 737757 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsy:DSY1355 hypothetical protein; binding-protein-dependent transport system inner membrane protein 736984..737757 Clostridium beijerinckii NCIMB 8052 5291849 YP_001307762.1 CDS Cbei_0619 NC_009617.1 738754 738906 D KEGG: mta:Moth_1978 hypothetical protein; hypothetical protein 738754..738906 Clostridium beijerinckii NCIMB 8052 5291850 YP_001307763.1 CDS Cbei_0620 NC_009617.1 739188 740669 D PFAM: oxidoreductase/nitrogenase, component 1; KEGG: cth:Cthe_1565 nitrogenase; nitrogenase 739188..740669 Clostridium beijerinckii NCIMB 8052 5291851 YP_001307764.1 CDS Cbei_0621 NC_009617.1 740653 741981 D PFAM: oxidoreductase/nitrogenase, component 1; KEGG: cth:Cthe_1566 nitrogenase; nitrogenase 740653..741981 Clostridium beijerinckii NCIMB 8052 5291852 YP_001307765.1 CDS Cbei_0622 NC_009617.1 742247 743545 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cth:Cthe_1569 O-acetylhomoserine aminocarboxypropyltransferase; cysteine synthase 742247..743545 Clostridium beijerinckii NCIMB 8052 5291853 YP_001307766.1 CDS Cbei_0623 NC_009617.1 743666 744520 D TIGRFAM: nitrogenase iron protein; PFAM: NifH/frxC-family protein; KEGG: cth:Cthe_1573 nitrogenase iron protein; nitrogenase iron protein 743666..744520 Clostridium beijerinckii NCIMB 8052 5291854 YP_001307767.1 CDS Cbei_0624 NC_009617.1 744598 745377 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK2999 ABC transporter (ATP-binding protein); ABC transporter 744598..745377 Clostridium beijerinckii NCIMB 8052 5291855 YP_001307768.1 CDS Cbei_0625 NC_009617.1 745374 746042 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fnu:FN0659 ABC transporter permease; binding-protein-dependent transport system inner membrane protein 745374..746042 Clostridium beijerinckii NCIMB 8052 5291856 YP_001307769.1 CDS Cbei_0626 NC_009617.1 746059 746904 D PFAM: NLPA lipoprotein; KEGG: cac:CAC0986 lipoprotein, attached to the cytoplasmic membrane, NLPA family; NLPA lipoprotein 746059..746904 Clostridium beijerinckii NCIMB 8052 5291857 YP_001307770.1 CDS Cbei_0627 NC_009617.1 746918 747265 D PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: mac:MA2936 hypothetical protein; dinitrogenase iron-molybdenum cofactor biosynthesis protein 746918..747265 Clostridium beijerinckii NCIMB 8052 5291858 YP_001307771.1 CDS Cbei_0628 NC_009617.1 747403 748275 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cth:Cthe_1568 radical SAM; radical SAM domain-containing protein 747403..748275 Clostridium beijerinckii NCIMB 8052 5291859 YP_001307772.1 CDS Cbei_0629 NC_009617.1 748519 749679 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: cac:CAC0930 cystathionine gamma-synthase; cystathionine gamma-synthase 748519..749679 Clostridium beijerinckii NCIMB 8052 5291860 YP_001307773.1 CDS Cbei_0630 NC_009617.1 749676 750590 D PFAM: Pyridoxal-5'-phosphate-dependent protein, beta subunit; KEGG: cac:CAC0931 cysteine synthase; pyridoxal-5'-phosphate-dependent protein subunit beta 749676..750590 Clostridium beijerinckii NCIMB 8052 5291861 YP_001307774.1 CDS Cbei_0631 NC_009617.1 750797 752329 D PFAM: oxidoreductase/nitrogenase, component 1; KEGG: rru:Rru_A0794 nitrogenase; nitrogenase 750797..752329 Clostridium beijerinckii NCIMB 8052 5291862 YP_001307775.1 CDS Cbei_0632 NC_009617.1 752355 753713 D PFAM: oxidoreductase/nitrogenase, component 1; KEGG: rru:Rru_A0793 nitrogenase; nitrogenase 752355..753713 Clostridium beijerinckii NCIMB 8052 5291863 YP_001307776.1 CDS Cbei_0633 NC_009617.1 754088 756355 D KEGG: cpf:CPF_1502 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B, OB region N-terminal domain; SMART: Cold shock protein; ribonuclease R 754088..756355 Clostridium beijerinckii NCIMB 8052 5291864 YP_001307777.1 CDS smpB NC_009617.1 756504 756974 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 756504..756974 Clostridium beijerinckii NCIMB 8052 5291865 YP_001307778.1 CDS Cbei_0635 NC_009617.1 757193 760450 D PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: cac:CAC0353 2,3-cyclic-nucleotide 2'phosphodiesterase (duplication); 5'-nucleotidase domain-containing protein 757193..760450 Clostridium beijerinckii NCIMB 8052 5291866 YP_001307779.1 CDS Cbei_0636 NC_009617.1 761143 762108 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC0984 ABC transporter ATP-binding protein; ABC transporter 761143..762108 Clostridium beijerinckii NCIMB 8052 5291867 YP_001307780.1 CDS Cbei_0637 NC_009617.1 762108 762746 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cno:NT01CX_0185 ABC transporter permease; binding-protein-dependent transport system inner membrane protein 762108..762746 Clostridium beijerinckii NCIMB 8052 5291868 YP_001307781.1 CDS Cbei_0638 NC_009617.1 762758 763588 D TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: cno:NT01CX_0184 lipoprotein, attached to the cytoplasmic membrane, NlpA family; YaeC family lipoprotein 762758..763588 Clostridium beijerinckii NCIMB 8052 5291869 YP_001307782.1 CDS Cbei_0639 NC_009617.1 763901 764863 D PFAM: protein of unknown function DUF1232; KEGG: cpr:CPR_1437 hypothetical protein; hypothetical protein 763901..764863 Clostridium beijerinckii NCIMB 8052 5291870 YP_001307783.1 CDS Cbei_0640 NC_009617.1 764965 765915 D KEGG: cno:NT01CX_1570 ribonuclease HI; hypothetical protein 764965..765915 Clostridium beijerinckii NCIMB 8052 5291871 YP_001307784.1 CDS Cbei_0641 NC_009617.1 766137 766310 D hypothetical protein 766137..766310 Clostridium beijerinckii NCIMB 8052 5291872 YP_001307785.1 CDS Cbei_0642 NC_009617.1 766564 767874 D PFAM: helix-turn-helix domain protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: cpr:CPR_1434 helix-turn-helix domain protein; XRE family transcriptional regulator 766564..767874 Clostridium beijerinckii NCIMB 8052 5291873 YP_001307786.1 CDS Cbei_0643 NC_009617.1 767892 769157 D PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: ctc:CTC00534 ferrous iron transport protein B homolog; hypothetical protein 767892..769157 Clostridium beijerinckii NCIMB 8052 5291874 YP_001307787.1 CDS Cbei_0644 NC_009617.1 769315 769701 R PFAM: CBS domain containing protein; KEGG: dsy:DSY1459 hypothetical protein; hypothetical protein complement(769315..769701) Clostridium beijerinckii NCIMB 8052 5291875 YP_001307788.1 CDS Cbei_0645 NC_009617.1 769968 772559 D PFAM: ATPase AAA, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: ATPase AAA; KEGG: cno:NT01CX_2301 ClpB protein; ATPase 769968..772559 Clostridium beijerinckii NCIMB 8052 5291876 YP_001307789.1 CDS Cbei_0646 NC_009617.1 772829 773425 R KEGG: cpe:CPE1421 hypothetical protein; hypothetical protein complement(772829..773425) Clostridium beijerinckii NCIMB 8052 5291877 YP_001307790.1 CDS Cbei_0647 NC_009617.1 774050 774853 D catalyzes the adenylation of ThiS which is involved in the formation of 5-methyl-4-(beta-hydroxyethyl)thiazole phosphate; thiamine biosynthesis protein ThiF 774050..774853 Clostridium beijerinckii NCIMB 8052 5291878 YP_001307791.1 CDS Cbei_0648 NC_009617.1 774861 775511 D PFAM: thiamine monophosphate synthase; KEGG: cno:NT01CX_1504 thiamine-phosphate pyrophosphorylase; thiamine monophosphate synthase 774861..775511 Clostridium beijerinckii NCIMB 8052 5291879 YP_001307792.1 CDS Cbei_0649 NC_009617.1 775695 776561 D PFAM: PP-loop domain protein; KEGG: cpr:CPR_1477 PP-loop family protein; PP-loop domain-containing protein 775695..776561 Clostridium beijerinckii NCIMB 8052 5291880 YP_001307793.1 CDS Cbei_0650 NC_009617.1 776651 776842 D KEGG: cno:NT01CX_1350 hypothetical protein; hypothetical protein 776651..776842 Clostridium beijerinckii NCIMB 8052 5291881 YP_001307794.1 CDS Cbei_0651 NC_009617.1 777035 778780 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: cno:NT01CX_2347 diguanylate cyclase/phosphodiesterase domain 2; diguanylate cyclase/phosphodiesterase 777035..778780 Clostridium beijerinckii NCIMB 8052 5291882 YP_001307795.1 CDS Cbei_0652 NC_009617.1 779236 779754 D KEGG: cpf:CPF_1504 tryptophan transport protein; tryptophan transport protein 779236..779754 Clostridium beijerinckii NCIMB 8052 5291883 YP_001307796.1 CDS Cbei_0653 NC_009617.1 779827 780543 R PFAM: polysaccharide deacetylase; KEGG: cpe:CPE1477 probable endo-1,4-beta-xylanase; polysaccharide deacetylase complement(779827..780543) Clostridium beijerinckii NCIMB 8052 5291884 YP_001307797.1 CDS Cbei_0654 NC_009617.1 780721 786075 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: cno:NT01CX_0237 GGDEF domain protein; diguanylate cyclase 780721..786075 Clostridium beijerinckii NCIMB 8052 5291885 YP_001307798.1 CDS Cbei_0655 NC_009617.1 786173 786679 D PFAM: Cna B domain protein; KEGG: cpf:CPF_1723 hypothetical protein; CnaB domain-containing protein 786173..786679 Clostridium beijerinckii NCIMB 8052 5291886 YP_001307799.1 CDS Cbei_0656 NC_009617.1 786859 787299 D TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; KEGG: cno:NT01CX_0028 deoxyuridine 5triphosphate nucleotidohydrolase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 786859..787299 Clostridium beijerinckii NCIMB 8052 5291887 YP_001307800.1 CDS Cbei_0657 NC_009617.1 787339 787899 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mgm:Mmc1_1056 methyltransferase type 11; type 11 methyltransferase complement(787339..787899) Clostridium beijerinckii NCIMB 8052 5291888 YP_001307801.1 CDS Cbei_0658 NC_009617.1 788485 789042 D PFAM: Accessory gene regulator B; KEGG: cpf:CPF_0865 AgrB family protein; accessory gene regulator B 788485..789042 Clostridium beijerinckii NCIMB 8052 5291889 YP_001307802.1 CDS Cbei_0659 NC_009617.1 789261 790523 D PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: cpf:CPF_0863 sensor histidine kinase; signal transduction histidine kinase regulating citrate/malate metabolism 789261..790523 Clostridium beijerinckii NCIMB 8052 5291890 YP_001307803.1 CDS Cbei_0660 NC_009617.1 790809 791366 D PFAM: Accessory gene regulator B; KEGG: cpf:CPF_0865 AgrB family protein; accessory gene regulator B 790809..791366 Clostridium beijerinckii NCIMB 8052 5291891 YP_001307804.1 CDS Cbei_0661 NC_009617.1 791870 792760 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: cpf:CPF_1464 oxidoreductase, NAD-binding; ferredoxin-NADP(+) reductase subunit alpha 791870..792760 Clostridium beijerinckii NCIMB 8052 5291892 YP_001307805.1 CDS Cbei_0662 NC_009617.1 792760 794154 D function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase 792760..794154 Clostridium beijerinckii NCIMB 8052 5291893 YP_001307806.1 CDS Cbei_0663 NC_009617.1 794524 795243 D PFAM: protein of unknown function DUF161; KEGG: cpf:CPF_1372 hypothetical protein; hypothetical protein 794524..795243 Clostridium beijerinckii NCIMB 8052 5291894 YP_001307807.1 CDS Cbei_0664 NC_009617.1 795406 797406 R PFAM: alpha amylase, catalytic region; SMART: alpha amylase, C-terminal all-beta; alpha amylase, catalytic sub domain; KEGG: cac:CA_P0168 alpha-amylase; alpha amylase complement(795406..797406) Clostridium beijerinckii NCIMB 8052 5291895 YP_001307808.1 CDS Cbei_0665 NC_009617.1 798073 799788 D PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC1387 membrane associated chemotaxis sensory transducer protein (MSP domain and HamP domain); methyl-accepting chemotaxis sensory transducer 798073..799788 Clostridium beijerinckii NCIMB 8052 5291896 YP_001307809.1 CDS Cbei_0666 NC_009617.1 800214 800609 D KEGG: aba:Acid345_2515 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor, serine/threonine protein kinase 800214..800609 Clostridium beijerinckii NCIMB 8052 5291897 YP_001307810.1 CDS Cbei_0667 NC_009617.1 800671 802671 D PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY2131 hypothetical protein; methyl-accepting chemotaxis sensory transducer 800671..802671 Clostridium beijerinckii NCIMB 8052 5291898 YP_001307811.1 CDS Cbei_0668 NC_009617.1 802683 802955 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dsy:DSY3263 hypothetical protein; anti-sigma-factor antagonist 802683..802955 Clostridium beijerinckii NCIMB 8052 5291899 YP_001307812.1 CDS Cbei_0669 NC_009617.1 803010 804833 D TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; protein phosphatase 2C domain protein; KEGG: mhu:Mhun_0004 multi-sensor signal transduction histidine kinase; PAS/PAC sensor protein 803010..804833 Clostridium beijerinckii NCIMB 8052 5291900 YP_001307813.1 CDS Cbei_0670 NC_009617.1 805611 806606 D KEGG: eca:ECA4448 hypothetical protein; hypothetical protein 805611..806606 Clostridium beijerinckii NCIMB 8052 5296325 YP_001307814.1 CDS Cbei_0671 NC_009617.1 806718 807176 D KEGG: tte:TTE2433 hypothetical protein; hypothetical protein 806718..807176 Clostridium beijerinckii NCIMB 8052 5291902 YP_001307815.1 CDS Cbei_0672 NC_009617.1 807402 808622 D PFAM: transposase, mutator type; KEGG: swo:Swol_0155 hypothetical protein; transposase, mutator type 807402..808622 Clostridium beijerinckii NCIMB 8052 5291903 YP_001307816.1 CDS Cbei_0674 NC_009617.1 809197 810663 R KEGG: oih:OB2869 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; NAD-dependent aldehyde dehydrogenase-like protein complement(809197..810663) Clostridium beijerinckii NCIMB 8052 5296326 YP_001307817.1 CDS Cbei_0675 NC_009617.1 810761 811948 R KEGG: gsu:GSU1737 phenylacetate-CoA ligase; coenzyme F390 synthetase-like protein complement(810761..811948) Clostridium beijerinckii NCIMB 8052 5291905 YP_001307818.1 CDS Cbei_0676 NC_009617.1 812698 813087 D KEGG: mbu:Mbur_2297 transposase; transposase 812698..813087 Clostridium beijerinckii NCIMB 8052 5291906 YP_001307819.1 CDS Cbei_0677 NC_009617.1 813953 815407 D TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC1452 MDR-type permease; EmrB/QacA family drug resistance transporter 813953..815407 Clostridium beijerinckii NCIMB 8052 5291907 YP_001307820.1 CDS Cbei_0678 NC_009617.1 815877 816734 R PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: cac:CAC1451 AraC-type DNA-binding domain-containing protein; AraC family transcriptional regulator complement(815877..816734) Clostridium beijerinckii NCIMB 8052 5291908 YP_001307821.1 CDS Cbei_0679 NC_009617.1 816988 818544 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_0136 ABC transporter ATP-binding protein; ABC transporter 816988..818544 Clostridium beijerinckii NCIMB 8052 5291909 YP_001307822.1 CDS Cbei_0680 NC_009617.1 819171 819800 D PFAM: O-methyltransferase, family 3; KEGG: cno:NT01CX_2271 O-methyltransferase family; O-methyltransferase family protein 819171..819800 Clostridium beijerinckii NCIMB 8052 5291910 YP_001307823.1 CDS Cbei_0681 NC_009617.1 820473 821222 D PFAM: Thioesterase; KEGG: bcz:BCZK1713 thioesterase; thioesterase 820473..821222 Clostridium beijerinckii NCIMB 8052 5291911 YP_001307824.1 CDS Cbei_0682 NC_009617.1 821573 821830 D hypothetical protein 821573..821830 Clostridium beijerinckii NCIMB 8052 5291912 YP_001307825.1 CDS Cbei_0683 NC_009617.1 821927 823237 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bas:BUsg532 hypothetical 42.6 kD protein in gshB-ansB; radical SAM domain-containing protein 821927..823237 Clostridium beijerinckii NCIMB 8052 5291913 YP_001307826.1 CDS Cbei_0684 NC_009617.1 823312 824625 D PFAM: AMP-dependent synthetase and ligase; KEGG: hch:HCH_06164 acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; AMP-dependent synthetase and ligase 823312..824625 Clostridium beijerinckii NCIMB 8052 5291914 YP_001307827.1 CDS Cbei_0685 NC_009617.1 824806 825927 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: tpe:Tpen_0821 alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 824806..825927 Clostridium beijerinckii NCIMB 8052 5291915 YP_001307828.1 CDS Cbei_0686 NC_009617.1 826026 827726 D PFAM: AMP-dependent synthetase and ligase; KEGG: sdn:Sden_3532 amino acid adenylation; AMP-dependent synthetase and ligase 826026..827726 Clostridium beijerinckii NCIMB 8052 5291916 YP_001307829.1 CDS Cbei_0687 NC_009617.1 827757 828488 D PFAM: 4'-phosphopantetheinyl transferase; KEGG: rpc:RPC_3373 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 827757..828488 Clostridium beijerinckii NCIMB 8052 5291917 YP_001307830.1 CDS Cbei_0688 NC_009617.1 828508 829182 D PFAM: beta-lactamase domain protein; KEGG: bsu:BG12648 involved in polyketide synthesis; beta-lactamase domain-containing protein 828508..829182 Clostridium beijerinckii NCIMB 8052 5291918 YP_001307831.1 CDS Cbei_0689 NC_009617.1 829295 829600 D hypothetical protein 829295..829600 Clostridium beijerinckii NCIMB 8052 5291919 YP_001307832.1 CDS Cbei_0690 NC_009617.1 829832 830812 D PFAM: Radical SAM domain protein; KEGG: pai:PAE1082 hypothetical protein; radical SAM domain-containing protein 829832..830812 Clostridium beijerinckii NCIMB 8052 5291920 YP_001307833.1 CDS Cbei_0691 NC_009617.1 831345 832103 D PFAM: acyl-ACP thioesterase; KEGG: ctc:CTC00119 acyl-acyl carrier protein thioesterase; acyl-ACP thioesterase 831345..832103 Clostridium beijerinckii NCIMB 8052 5291921 YP_001307834.1 CDS Cbei_0692 NC_009617.1 832744 833772 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 832744..833772 Clostridium beijerinckii NCIMB 8052 5291922 YP_001307835.1 CDS Cbei_0694 NC_009617.1 834710 835891 R PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; KEGG: mbu:Mbur_2004 RNA-directed DNA polymerase; RNA-directed DNA polymerase complement(834710..835891) Clostridium beijerinckii NCIMB 8052 5296327 YP_001307836.1 CDS Cbei_0696 NC_009617.1 838318 838839 D PFAM: guanine-specific ribonuclease N1 and T1; KEGG: cac:CAC0843 ribonuclease precursor (barnase), secreted; guanine-specific ribonuclease N1 and T1 838318..838839 Clostridium beijerinckii NCIMB 8052 5296328 YP_001307837.1 CDS Cbei_0697 NC_009617.1 838861 839145 D PFAM: Barstar (barnase inhibitor); KEGG: cac:CAC0844 barstar-like protein ribonuclease (barnase) inhibitor; barstar (barnase inhibitor) 838861..839145 Clostridium beijerinckii NCIMB 8052 5291925 YP_001307838.1 CDS Cbei_0698 NC_009617.1 839233 839976 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: cpr:CPR_2604 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 839233..839976 Clostridium beijerinckii NCIMB 8052 5291926 YP_001307839.1 CDS Cbei_0699 NC_009617.1 840290 841717 D phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system cellobiose/arbutin/salicin-specific transporter subunit IIBC 840290..841717 Clostridium beijerinckii NCIMB 8052 5291927 YP_001307840.1 CDS Cbei_0700 NC_009617.1 841710 843134 D PFAM: glycoside hydrolase, family 1; KEGG: eca:ECA2166 6-phospho-beta-glucosidase; cryptic 6-phospho-beta-glucosidase 841710..843134 Clostridium beijerinckii NCIMB 8052 5291928 YP_001307841.1 CDS Cbei_0701 NC_009617.1 843360 844262 R TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Radical SAM domain protein; KEGG: spd:SPD_0229 glycyl-radical enzyme activating protein family protein; glycyl-radical activating family protein complement(843360..844262) Clostridium beijerinckii NCIMB 8052 5291929 YP_001307842.1 CDS Cbei_0702 NC_009617.1 844586 845338 D PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: ssa:SSA_0278 transcriptional repressor of sugar metabolism, GlpR/DeoR family; DeoR family transcriptional regulator 844586..845338 Clostridium beijerinckii NCIMB 8052 5291930 YP_001307843.1 CDS Cbei_0703 NC_009617.1 845717 846196 R KEGG: lme:LEUM_0362 hypothetical protein; hypothetical protein complement(845717..846196) Clostridium beijerinckii NCIMB 8052 5291931 YP_001307844.1 CDS Cbei_0704 NC_009617.1 846193 846402 R PFAM: helix-turn-helix domain protein; KEGG: ssa:SSA_2393 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(846193..846402) Clostridium beijerinckii NCIMB 8052 5291932 YP_001307845.1 CDS Cbei_0705 NC_009617.1 846785 849190 D TIGRFAM: pyruvate formate-lyase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL; KEGG: lpl:lp_2598 formate C-acetyltransferase; pyruvate formate-lyase 846785..849190 Clostridium beijerinckii NCIMB 8052 5291933 YP_001307846.1 CDS Cbei_0706 NC_009617.1 849348 849791 R PFAM: regulatory protein, MarR; KEGG: cac:CAC3669 transcriptional regulator, MarR/EmrR family; MarR family transcriptional regulator complement(849348..849791) Clostridium beijerinckii NCIMB 8052 5291934 YP_001307847.1 CDS Cbei_0707 NC_009617.1 850178 851356 R PFAM: major facilitator superfamily MFS_1; KEGG: oih:OB3076 antibiotic resistance protein; major facilitator superfamily transporter complement(850178..851356) Clostridium beijerinckii NCIMB 8052 5291935 YP_001307848.1 CDS Cbei_0708 NC_009617.1 851766 852398 D PFAM: cobalamin B12-binding domain protein; KEGG: mbu:Mbur_0956 cobalamin B12-binding protein; cobalamin B12-binding domain-containing protein 851766..852398 Clostridium beijerinckii NCIMB 8052 5291936 YP_001307849.1 CDS Cbei_0709 NC_009617.1 852398 853441 D PFAM: Uroporphyrinogen decarboxylase (URO-D); KEGG: mbu:Mbur_0957 uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 852398..853441 Clostridium beijerinckii NCIMB 8052 5291937 YP_001307850.1 CDS Cbei_0710 NC_009617.1 853446 855791 D PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cth:Cthe_0806 PAS/PAC sensor hybrid histidine kinase; histidine kinase 853446..855791 Clostridium beijerinckii NCIMB 8052 5291938 YP_001307851.1 CDS Cbei_0711 NC_009617.1 856709 857686 D TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA subunit; PFAM: PTS system fructose subfamily IIA component; PTS system sorbose subfamily IIB component; KEGG: cac:CA_P0066 mannose-specific phosphotransferase system component IIAB; PTS system mannose/fructose/sorbose family transporter subunit IIA 856709..857686 Clostridium beijerinckii NCIMB 8052 5291939 YP_001307852.1 CDS Cbei_0712 NC_009617.1 857722 858528 D PFAM: phosphotransferase system PTS, sorbose-specific IIC subunit; KEGG: cac:CA_P0067 mannose/fructose-specific phosphotransferase system component IIC; PTS system sorbose-specific transporter subunit IIC 857722..858528 Clostridium beijerinckii NCIMB 8052 5291940 YP_001307853.1 CDS Cbei_0713 NC_009617.1 858548 859459 D TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: cac:CA_P0068 mannose-specific phosphotransferase system component IID; PTS system mannose/fructose/sorbose family transporter subunit IID 858548..859459 Clostridium beijerinckii NCIMB 8052 5291941 YP_001307854.1 CDS Cbei_0714 NC_009617.1 859544 859990 D PFAM: protein of unknown function DUF956; KEGG: cac:CA_P0069 uncharacterized protein, homolog of Streptococcus salivarius (5669858); hypothetical protein 859544..859990 Clostridium beijerinckii NCIMB 8052 5291942 YP_001307855.1 CDS Cbei_0715 NC_009617.1 860201 860992 R PFAM: nitroreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cac:CAC3483 nitroreductase fused to ferredoxin domain; nitroreductase complement(860201..860992) Clostridium beijerinckii NCIMB 8052 5291943 YP_001307856.1 CDS Cbei_0716 NC_009617.1 861271 862512 R PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC0560 integral membrane protein similar to antibiotic resistance protein B.subtilis; major facilitator superfamily transporter complement(861271..862512) Clostridium beijerinckii NCIMB 8052 5291944 YP_001307857.1 CDS Cbei_0717 NC_009617.1 862735 863553 D SMART: helix-turn-helix domain protein; KEGG: rle:RL4049 hypothetical protein; XRE family transcriptional regulator 862735..863553 Clostridium beijerinckii NCIMB 8052 5291945 YP_001307858.1 CDS Cbei_0718 NC_009617.1 863765 864652 D PFAM: GCN5-related N-acetyltransferase; regulatory protein, MarR; KEGG: bca:BCE_A0172 transcriptional regulator, MarR family protein; MarR family transcriptional regulator 863765..864652 Clostridium beijerinckii NCIMB 8052 5291946 YP_001307859.1 CDS Cbei_0719 NC_009617.1 864784 865602 R PFAM: Integrase, catalytic region; KEGG: sar:SAR2307 transposase; integrase catalytic subunit complement(864784..865602) Clostridium beijerinckii NCIMB 8052 5291947 YP_001307860.1 CDS Cbei_0720 NC_009617.1 865671 866351 R KEGG: cpr:CPR_2608 hypothetical protein; hypothetical protein complement(865671..866351) Clostridium beijerinckii NCIMB 8052 5291948 YP_001307861.1 CDS Cbei_0721 NC_009617.1 866577 867359 D TIGRFAM: phage replisome organizer, KEGG: sao:SAOUHSC_02069 phi PV83 orf 20-like protein; phage replisome organizer 866577..867359 Clostridium beijerinckii NCIMB 8052 5291949 YP_001307862.1 CDS Cbei_0722 NC_009617.1 867466 868338 R PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: bsu:BG14032 similar to transcriptional regulator (LysR family); LysR family transcriptional regulator complement(867466..868338) Clostridium beijerinckii NCIMB 8052 5291950 YP_001307863.1 CDS Cbei_0723 NC_009617.1 868523 869974 D TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: chy:CHY_0588 drug resistance transporter EmrB/QacA family protein; EmrB/QacA family drug resistance transporter 868523..869974 Clostridium beijerinckii NCIMB 8052 5291951 YP_001307864.1 CDS Cbei_0724 NC_009617.1 870225 871526 R PFAM: transposase IS116/IS110/IS902 family protein; KEGG: dsy:DSY3551 hypothetical protein; transposase IS116/IS110/IS902 family protein complement(870225..871526) Clostridium beijerinckii NCIMB 8052 5291952 YP_001307865.1 CDS Cbei_0725 NC_009617.1 871946 872530 D PFAM: nitroreductase; KEGG: bth:BT_1148 NADH dehydrogenase/NAD(P)H nitroreductase; nitroreductase 871946..872530 Clostridium beijerinckii NCIMB 8052 5291953 YP_001307866.1 CDS Cbei_0726 NC_009617.1 872647 873051 R PFAM: regulatory protein, MerR; KEGG: lbr:LVIS_2182 predicted transcriptional regulator; MerR family transcriptional regulator complement(872647..873051) Clostridium beijerinckii NCIMB 8052 5291954 YP_001307867.1 CDS Cbei_0727 NC_009617.1 873148 874602 D PFAM: aldehyde dehydrogenase; KEGG: reu:Reut_A1903 aldehyde dehydrogenase; aldehyde dehydrogenase 873148..874602 Clostridium beijerinckii NCIMB 8052 5291955 YP_001307868.1 CDS Cbei_0728 NC_009617.1 874717 875493 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cno:NT01CX_1999 SAM-dependent methyltransferase; type 11 methyltransferase 874717..875493 Clostridium beijerinckii NCIMB 8052 5291956 YP_001307869.1 CDS Cbei_0729 NC_009617.1 875799 877280 D PFAM: aldehyde dehydrogenase; KEGG: fnu:FN0454 aldehyde dehydrogenase B; aldehyde dehydrogenase 875799..877280 Clostridium beijerinckii NCIMB 8052 5291957 YP_001307870.1 CDS Cbei_0730 NC_009617.1 877468 878910 R KEGG: cac:CAC0729 hypothetical protein; hypothetical protein complement(877468..878910) Clostridium beijerinckii NCIMB 8052 5291958 YP_001307871.1 CDS Cbei_0731 NC_009617.1 879364 880389 D PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: hch:HCH_06458 transcriptional regulator; alanine racemase 879364..880389 Clostridium beijerinckii NCIMB 8052 5291959 YP_001307872.1 CDS Cbei_0732 NC_009617.1 880767 882017 D PFAM: extracellular solute-binding protein, family 1; KEGG: bcl:ABC3496 sugar ABC transporter substrate-binding protein; extracellular solute-binding protein 880767..882017 Clostridium beijerinckii NCIMB 8052 5291960 YP_001307873.1 CDS Cbei_0733 NC_009617.1 882191 883054 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ooe:OEOE_0810 ABC-type sugar transport system, permease component; sugar ABC transporter permease 882191..883054 Clostridium beijerinckii NCIMB 8052 5291961 YP_001307874.1 CDS Cbei_0734 NC_009617.1 883051 883875 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3498 sugar ABC transporter permease; sugar ABC transporter permease 883051..883875 Clostridium beijerinckii NCIMB 8052 5291962 YP_001307875.1 CDS Cbei_0735 NC_009617.1 883929 885569 D PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: bcz:BCZK3772 oligo-1,6-glucosidase; alpha amylase 883929..885569 Clostridium beijerinckii NCIMB 8052 5291963 YP_001307876.1 CDS Cbei_0736 NC_009617.1 886113 887453 D hypothetical protein 886113..887453 Clostridium beijerinckii NCIMB 8052 5291964 YP_001307877.1 CDS Cbei_0737 NC_009617.1 887553 888587 D PFAM: peptidase U32; KEGG: dsy:DSY0725 hypothetical protein; peptidase U32 887553..888587 Clostridium beijerinckii NCIMB 8052 5291965 YP_001307878.1 CDS Cbei_0738 NC_009617.1 888829 890046 R PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC3482 predicted permease; major facilitator superfamily transporter complement(888829..890046) Clostridium beijerinckii NCIMB 8052 5291966 YP_001307879.1 CDS Cbei_0739 NC_009617.1 890171 890806 R PFAM: NADPH-dependent FMN reductase; KEGG: gsu:GSU0179 NADPH-dependent FMN reductase domain protein; NADPH-dependent FMN reductase complement(890171..890806) Clostridium beijerinckii NCIMB 8052 5291967 YP_001307880.1 CDS Cbei_0740 NC_009617.1 891195 891773 D PFAM: regulatory protein, TetR; KEGG: cac:CAC3481 transcriptional regulator, AcrR family; TetR family transcriptional regulator 891195..891773 Clostridium beijerinckii NCIMB 8052 5291968 YP_001307881.1 CDS Cbei_0741 NC_009617.1 892285 892794 D PFAM: protein of unknown function DUF988; KEGG: cpr:CPR_1478 hypothetical protein; hypothetical protein 892285..892794 Clostridium beijerinckii NCIMB 8052 5291969 YP_001307882.1 CDS Cbei_0742 NC_009617.1 893159 894373 D KEGG: cac:CAC0739 predicted membrane protein; membrane protein 893159..894373 Clostridium beijerinckii NCIMB 8052 5291970 YP_001307883.1 CDS Cbei_0743 NC_009617.1 894664 895797 D KEGG: cpr:CPR_1272 FliB family protein; FliB family protein 894664..895797 Clostridium beijerinckii NCIMB 8052 5291971 YP_001307884.1 CDS Cbei_0744 NC_009617.1 896133 898568 D TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: pin:Ping_1200 diguanylate cyclase with PAS/PAC sensor; PAS/PAC sensor-containing diguanylate cyclase 896133..898568 Clostridium beijerinckii NCIMB 8052 5291972 YP_001307885.1 CDS Cbei_0745 NC_009617.1 898983 900563 D KEGG: cpf:CPF_0234 hypothetical protein; hypothetical protein 898983..900563 Clostridium beijerinckii NCIMB 8052 5291973 YP_001307886.1 CDS Cbei_0746 NC_009617.1 900989 902290 R PFAM: transposase IS116/IS110/IS902 family protein; KEGG: dsy:DSY3551 hypothetical protein; transposase IS116/IS110/IS902 family protein complement(900989..902290) Clostridium beijerinckii NCIMB 8052 5291974 YP_001307887.1 CDS Cbei_0747 NC_009617.1 902709 904403 D PFAM: glycosyl hydrolase, BNR repeat-containing protein; KEGG: cac:CAC3457 predicted membrane protein; BNR repeat-containing glycosyl hydrolase 902709..904403 Clostridium beijerinckii NCIMB 8052 5291975 YP_001307888.1 CDS Cbei_0748 NC_009617.1 904649 905353 R TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: sar:SAR0140 deoxyribose-phosphate aldolase; deoxyribose-phosphate aldolase complement(904649..905353) Clostridium beijerinckii NCIMB 8052 5291976 YP_001307889.1 CDS Cbei_0749 NC_009617.1 905613 906497 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: tte:TTE2419 transcriptional regulator; RpiR family transcriptional regulator 905613..906497 Clostridium beijerinckii NCIMB 8052 5291977 YP_001307890.1 CDS Cbei_0750 NC_009617.1 906685 907149 R PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: cpr:CPR_1270 transcription elongation factor GreA; GreA/GreB family elongation factor complement(906685..907149) Clostridium beijerinckii NCIMB 8052 5291978 YP_001307891.1 CDS Cbei_0751 NC_009617.1 907455 909593 D TIGRFAM: PTS system, glucose subfamily, IIA subunit; PTS system, glucose-like IIB subunint; PFAM: sugar-specific permease, EIIA 1 domain; phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: gka:GK0991 PTS system, glucose-specific enzyme II, A component; PTS system glucose subfamily transporter subunit IIA 907455..909593 Clostridium beijerinckii NCIMB 8052 5291979 YP_001307892.1 CDS Cbei_0752 NC_009617.1 909619 910455 D PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: cac:CAC1355 transcriptional antiterminator (BglG family); transcriptional antiterminator BglG 909619..910455 Clostridium beijerinckii NCIMB 8052 5291980 YP_001307893.1 CDS Cbei_0753 NC_009617.1 910856 912055 D KEGG: mpe:MYPE1550 predicted cytoskeletal protein; hypothetical protein 910856..912055 Clostridium beijerinckii NCIMB 8052 5291981 YP_001307894.1 CDS Cbei_0754 NC_009617.1 912083 913228 D PFAM: toxic anion resistance family protein; KEGG: ser:SERP0976 tellurite resistance protein; toxic anion resistance family protein 912083..913228 Clostridium beijerinckii NCIMB 8052 5291982 YP_001307895.1 CDS Cbei_0755 NC_009617.1 913563 914462 D PFAM: response regulator receiver; CheW domain protein; KEGG: cno:NT01CX_2338 chemotaxis protein CheV-like protein; CheW protein 913563..914462 Clostridium beijerinckii NCIMB 8052 5291983 YP_001307896.1 CDS Cbei_0756 NC_009617.1 914917 916248 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: cac:CAC0747 secreted protein containing uncharacterized conserved protein of ErfK family; ErfK/YbiS/YcfS/YnhG family protein 914917..916248 Clostridium beijerinckii NCIMB 8052 5291984 YP_001307897.1 CDS Cbei_0757 NC_009617.1 916542 917924 D KEGG: cac:CAC0747 secreted protein containing uncharacterized conserved protein of ErfK family; ErfK family protein 916542..917924 Clostridium beijerinckii NCIMB 8052 5291985 YP_001307898.1 CDS Cbei_0758 NC_009617.1 918242 918553 D PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: spn:SP_0249 PTS system, IIB component; phosphotransferase system, lactose/cellobiose-specific IIB subunit 918242..918553 Clostridium beijerinckii NCIMB 8052 5291986 YP_001307899.1 CDS Cbei_0759 NC_009617.1 918844 919989 D PFAM: aminotransferase, class V; KEGG: cpf:CPF_0845 aminotransferase, class V; serine--pyruvate transaminase 918844..919989 Clostridium beijerinckii NCIMB 8052 5291987 YP_001307900.1 CDS Cbei_0760 NC_009617.1 920020 920553 D KEGG: ctc:CTC01976 membrane spanning protein; membrane spanning protein 920020..920553 Clostridium beijerinckii NCIMB 8052 5291988 YP_001307901.1 CDS Cbei_0761 NC_009617.1 920740 921420 D TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase; KEGG: cac:CAC1431 ribose 5-phosphate isomerase; ribose 5-phosphate isomerase 920740..921420 Clostridium beijerinckii NCIMB 8052 5291989 YP_001307902.1 CDS Cbei_0762 NC_009617.1 921468 922436 D PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: cac:CAC3400 predicted dehydrogenase; oxidoreductase domain-containing protein 921468..922436 Clostridium beijerinckii NCIMB 8052 5291990 YP_001307903.1 CDS Cbei_0763 NC_009617.1 922467 923342 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: lsl:LSL_1438 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 922467..923342 Clostridium beijerinckii NCIMB 8052 5291991 YP_001307904.1 CDS Cbei_0764 NC_009617.1 923428 924348 D PFAM: aldo/keto reductase; KEGG: cac:CAC3378 aldo/keto reductase family enzyme; aldo/keto reductase 923428..924348 Clostridium beijerinckii NCIMB 8052 5291992 YP_001307905.1 CDS Cbei_0765 NC_009617.1 929991 930458 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cac:CAC0327 bacterioferritin comigratory protein (AHPC/TSA family); alkyl hydroperoxide reductase complement(929991..930458) Clostridium beijerinckii NCIMB 8052 5296332 YP_001307906.1 CDS Cbei_0766 NC_009617.1 931004 932293 D TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bth:BT_2387 O-acetylhomoserine (thiol)-lyase; O-acetylhomoserine/O-acetylserine sulfhydrylase 931004..932293 Clostridium beijerinckii NCIMB 8052 5291994 YP_001307907.1 CDS Cbei_0767 NC_009617.1 932502 933272 R PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: spd:SPD_0574 DNA-binding response regulator; response regulator receiver protein complement(932502..933272) Clostridium beijerinckii NCIMB 8052 5291995 YP_001307908.1 CDS Cbei_0768 NC_009617.1 933250 935127 R PFAM: histidine kinase, HAMP region domain protein; histidine kinase internal region; KEGG: tte:TTE2344 predicted ATPase; histidine kinase internal region complement(933250..935127) Clostridium beijerinckii NCIMB 8052 5291996 YP_001307909.1 CDS Cbei_0769 NC_009617.1 935299 936627 D PFAM: extracellular solute-binding protein, family 1; KEGG: bha:BH2226 multiple sugar transport system substrate-binding protein; extracellular solute-binding protein 935299..936627 Clostridium beijerinckii NCIMB 8052 5291997 YP_001307910.1 CDS Cbei_0770 NC_009617.1 936694 937572 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PC00038 probable sugar ABC transporter permease; binding-protein-dependent transport system inner membrane protein 936694..937572 Clostridium beijerinckii NCIMB 8052 5291998 YP_001307911.1 CDS Cbei_0771 NC_009617.1 937572 938399 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cno:NT01CX_0967 sugar ABC transporter permease; binding-protein-dependent transport system inner membrane protein 937572..938399 Clostridium beijerinckii NCIMB 8052 5291999 YP_001307912.1 CDS Cbei_0772 NC_009617.1 938529 940886 D catalyzes the transfer of alpha-xylosyl residue from alpha-xyloside to xylose, glucose, mannose, fructose, maltose, isomaltose, nigerose, kojibiose, sucrose, and trehalose; shows higher activity against alpha-xylosyl fluoride, isoprimeverose (6-O-alpha-xylopyranosyl-glucopyranose), and alpha-xyloside in xyloglucan oligosaccharides; alpha-xylosidase 938529..940886 Clostridium beijerinckii NCIMB 8052 5292000 YP_001307913.1 CDS Cbei_0773 NC_009617.1 941066 942841 D TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; Oligopeptidase F; KEGG: tte:TTE2488 oligoendopeptidase F; pepF/M3 family oligoendopeptidase 941066..942841 Clostridium beijerinckii NCIMB 8052 5292001 YP_001307914.1 CDS Cbei_0774 NC_009617.1 942930 943688 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cpr:CPR_2063 polyferredoxin; 4Fe-4S ferredoxin 942930..943688 Clostridium beijerinckii NCIMB 8052 5292002 YP_001307915.1 CDS Cbei_0775 NC_009617.1 943797 944564 D KEGG: fnu:FN0522 exonuclease SBCC; hypothetical protein 943797..944564 Clostridium beijerinckii NCIMB 8052 5292003 YP_001307916.1 CDS Cbei_0776 NC_009617.1 944836 945144 D TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: ssp:SSP1650 thioredoxin; thioredoxin 944836..945144 Clostridium beijerinckii NCIMB 8052 5292004 YP_001307917.1 CDS Cbei_0777 NC_009617.1 945277 945756 D PFAM: glutathione peroxidase; KEGG: llm:llmg_1088 Gpo protein; glutathione peroxidase 945277..945756 Clostridium beijerinckii NCIMB 8052 5292005 YP_001307918.1 CDS Cbei_0778 NC_009617.1 945883 946749 D PFAM: glucose-inhibited division protein A; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cpr:CPR_2349 thioredoxin reductase; thioredoxin-disulfide reductase 945883..946749 Clostridium beijerinckii NCIMB 8052 5292006 YP_001307919.1 CDS Cbei_0779 NC_009617.1 946924 947364 D PFAM: regulatory protein, MarR; KEGG: cpr:CPR_1032 transcriptional regulator, MarR family; MarR family transcriptional regulator 946924..947364 Clostridium beijerinckii NCIMB 8052 5292007 YP_001307920.1 CDS Cbei_0780 NC_009617.1 947419 948099 D PFAM: cyclic nucleotide-binding; KEGG: cac:CAC0884 cAMP-binding domain (catabolite gene activator) and regulatory subunit of cAMP-dependent protein kinase; cyclic nucleotide-binding protein 947419..948099 Clostridium beijerinckii NCIMB 8052 5292008 YP_001307921.1 CDS Cbei_0781 NC_009617.1 948246 948938 D PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: cac:CAC1511 FNR-like catabolite gene activator (c-AMP binding domain); Crp/Fnr family transcriptional regulator 948246..948938 Clostridium beijerinckii NCIMB 8052 5292009 YP_001307922.1 CDS Cbei_0782 NC_009617.1 949019 949786 D PFAM: formate/nitrite transporter; KEGG: cac:CAC1512 formate/nitrite family of transporter; formate/nitrite transporter 949019..949786 Clostridium beijerinckii NCIMB 8052 5292010 YP_001307923.1 CDS Cbei_0783 NC_009617.1 949799 950809 D TIGRFAM: Sulfite reductase, Subunit A; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cpf:CPF_1693 sulfite reductase, iron-sulfur subunit; sulfite reductase subunit A 949799..950809 Clostridium beijerinckii NCIMB 8052 5292011 YP_001307924.1 CDS Cbei_0784 NC_009617.1 950802 951596 D with AsrAC catalyzes the reduction of sulfite to hydrogen sulfide; anaerobic sulfite reductase subunit B 950802..951596 Clostridium beijerinckii NCIMB 8052 5292012 YP_001307925.1 CDS Cbei_0785 NC_009617.1 951609 952574 D TIGRFAM: Sulfite reductase, Subunit C; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: cpf:CPF_1691 anaerobic sulfite reductase, subunit C; sulfite reductase subunit C 951609..952574 Clostridium beijerinckii NCIMB 8052 5292013 YP_001307926.1 CDS Cbei_0786 NC_009617.1 953476 955113 D catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 953476..955113 Clostridium beijerinckii NCIMB 8052 5292014 YP_001307927.1 CDS Cbei_0787 NC_009617.1 955411 957249 D PFAM: amino acid permease-associated region; KEGG: cac:CA_P0027 predicted amino acid permeases; amino acid permease-associated protein 955411..957249 Clostridium beijerinckii NCIMB 8052 5292015 YP_001307928.1 CDS Cbei_0788 NC_009617.1 957390 958814 R PFAM: amino acid permease-associated region; KEGG: cno:NT01CX_2354 lysine-specific permease; amino acid permease-associated protein complement(957390..958814) Clostridium beijerinckii NCIMB 8052 5292016 YP_001307929.1 CDS Cbei_0789 NC_009617.1 959397 960200 R KEGG: dsy:DSY1434 hypothetical protein; hypothetical protein complement(959397..960200) Clostridium beijerinckii NCIMB 8052 5292017 YP_001307930.1 CDS Cbei_0790 NC_009617.1 960194 960973 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY1433 hypothetical protein; ABC transporter complement(960194..960973) Clostridium beijerinckii NCIMB 8052 5292018 YP_001307931.1 CDS Cbei_0791 NC_009617.1 960973 961341 R PFAM: GntR family transcriptional regulator; KEGG: dsy:DSY1432 hypothetical protein; GntR family transcriptional regulator complement(960973..961341) Clostridium beijerinckii NCIMB 8052 5292019 YP_001307932.1 CDS Cbei_0792 NC_009617.1 961559 962488 D 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 961559..962488 Clostridium beijerinckii NCIMB 8052 5292020 YP_001307933.1 CDS Cbei_0793 NC_009617.1 962496 963803 D catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 962496..963803 Clostridium beijerinckii NCIMB 8052 5292021 YP_001307934.1 CDS Cbei_0794 NC_009617.1 963778 964623 D TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; KEGG: cno:NT01CX_0088 nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide pyrophosphorylase 963778..964623 Clostridium beijerinckii NCIMB 8052 5292022 YP_001307935.1 CDS Cbei_0795 NC_009617.1 964799 965533 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cth:Cthe_0035 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin 964799..965533 Clostridium beijerinckii NCIMB 8052 5292023 YP_001307936.1 CDS Cbei_0796 NC_009617.1 965754 966188 D PFAM: UspA domain protein; KEGG: gme:Gmet_2678 UspA; UspA domain-containing protein 965754..966188 Clostridium beijerinckii NCIMB 8052 5292024 YP_001307937.1 CDS Cbei_0797 NC_009617.1 966503 966748 D hypothetical protein 966503..966748 Clostridium beijerinckii NCIMB 8052 5292025 YP_001307938.1 CDS Cbei_0798 NC_009617.1 966779 967798 D TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase, class Ib; KEGG: lsa:LSA0327 tryptophanyl--tRNA synthetase; tryptophanyl-tRNA synthetase 966779..967798 Clostridium beijerinckii NCIMB 8052 5292026 YP_001307939.1 CDS Cbei_0799 NC_009617.1 967830 968285 D hypothetical protein 967830..968285 Clostridium beijerinckii NCIMB 8052 5292027 YP_001307940.1 CDS Cbei_0800 NC_009617.1 968339 969565 R PFAM: peptidase M29, aminopeptidase II; KEGG: ctc:CTC01997 aminopeptidase II; peptidase M29, aminopeptidase II complement(968339..969565) Clostridium beijerinckii NCIMB 8052 5292028 YP_001307941.1 CDS Cbei_0801 NC_009617.1 969879 972482 D has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 969879..972482 Clostridium beijerinckii NCIMB 8052 5292029 YP_001307942.1 CDS coaE NC_009617.1 972464 973117 D catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 972464..973117 Clostridium beijerinckii NCIMB 8052 5292030 YP_001307943.1 CDS Cbei_0803 NC_009617.1 973132 973767 D PFAM: Lytic transglycosylase, catalytic; KEGG: cpr:CPR_1960 secreted protein; lytic transglycosylase 973132..973767 Clostridium beijerinckii NCIMB 8052 5292031 YP_001307944.1 CDS Cbei_0804 NC_009617.1 974346 976055 D PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01881 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 974346..976055 Clostridium beijerinckii NCIMB 8052 5296333 YP_001307945.1 CDS Cbei_0805 NC_009617.1 976343 978640 D KEGG: cno:NT01CX_0286 phage infection protein; phage infection protein 976343..978640 Clostridium beijerinckii NCIMB 8052 5292033 YP_001307946.1 CDS Cbei_0806 NC_009617.1 978675 980966 D KEGG: cno:NT01CX_0286 phage infection protein; phage infection protein 978675..980966 Clostridium beijerinckii NCIMB 8052 5292034 YP_001307947.1 CDS Cbei_0807 NC_009617.1 981137 983047 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cpe:CPE1987 two-component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 981137..983047 Clostridium beijerinckii NCIMB 8052 5292035 YP_001307948.1 CDS Cbei_0808 NC_009617.1 983050 985065 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cpf:CPF_2241 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 983050..985065 Clostridium beijerinckii NCIMB 8052 5292036 YP_001307949.1 CDS Cbei_0809 NC_009617.1 985260 985760 D PFAM: TspO/MBR family protein; KEGG: cpr:CPR_1952 TspO/MBR family protein; TspO and MBR-like protein 985260..985760 Clostridium beijerinckii NCIMB 8052 5292037 YP_001307950.1 CDS Cbei_0810 NC_009617.1 986071 988377 D KEGG: cpr:CPR_2023 ATP-dependent protease; ATP-dependent protease 986071..988377 Clostridium beijerinckii NCIMB 8052 5292038 YP_001307951.1 CDS Cbei_0811 NC_009617.1 988587 989657 D KEGG: cef:CE0340 transposase; hypothetical protein 988587..989657 Clostridium beijerinckii NCIMB 8052 5292039 YP_001307952.1 CDS Cbei_0812 NC_009617.1 990046 990381 D TIGRFAM: anti-anti-sigma factor; Anti-sigma F factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cpr:CPR_2022 anti-sigma F factor antagonist; anti-sigma-factor antagonist 990046..990381 Clostridium beijerinckii NCIMB 8052 5292040 YP_001307953.1 CDS Cbei_0813 NC_009617.1 990396 990827 D binds to sigma F preventing its association with RNA polymerase during sporulation; anti-sigma F factor 990396..990827 Clostridium beijerinckii NCIMB 8052 5292041 YP_001307954.1 CDS Cbei_0814 NC_009617.1 990838 991593 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the prespore at the onset of sporulation. Interaction with spoIIAB inhibits sigma F activity throughout the cell before the formation of the asymmetric septum; after septation the interaction is confined to the mother cell, and sigma F activity is released in the prespore.; sporulation sigma factor SigF 990838..991593 Clostridium beijerinckii NCIMB 8052 5292042 YP_001307955.1 CDS Cbei_0815 NC_009617.1 991795 992262 D TIGRFAM: Sporulation stage V, protein AC; PFAM: SpoVA protein; KEGG: ctc:CTC02245 stage V sporulation protein AC; sporulation stage V, protein AC 991795..992262 Clostridium beijerinckii NCIMB 8052 5292043 YP_001307956.1 CDS Cbei_0816 NC_009617.1 992365 993384 D PFAM: Stage V sporulation AD family protein; KEGG: cpf:CPF_2303 stage V sporulation protein AD; stage V sporulation protein AD 992365..993384 Clostridium beijerinckii NCIMB 8052 5292044 YP_001307957.1 CDS Cbei_0817 NC_009617.1 993457 993813 D TIGRFAM: Sporulation stage V, protein AE; PFAM: SpoVA protein; KEGG: cpr:CPR_2017 stage V sporulation protein AE; sporulation stage V, protein AE 993457..993813 Clostridium beijerinckii NCIMB 8052 5292045 YP_001307958.1 CDS Cbei_0818 NC_009617.1 994048 996567 D PFAM: E1-E2 ATPase-associated domain protein; KEGG: cno:NT01CX_0068 probable calcium-transporting ATPase; E1-E2 ATPase-associated domain-containing protein 994048..996567 Clostridium beijerinckii NCIMB 8052 5292046 YP_001307959.1 CDS Cbei_0819 NC_009617.1 996572 998263 D PFAM: ComEC/Rec2-related protein; KEGG: cno:NT01CX_0067 ComE operon protein 3; ComEC/Rec2-like protein 996572..998263 Clostridium beijerinckii NCIMB 8052 5292047 YP_001307960.1 CDS holA NC_009617.1 998324 999358 D required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 998324..999358 Clostridium beijerinckii NCIMB 8052 5292048 YP_001307961.1 CDS rpsT NC_009617.1 999596 999859 R binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 complement(999596..999859) Clostridium beijerinckii NCIMB 8052 5292049 YP_001307962.1 CDS Cbei_0822 NC_009617.1 1000032 1001015 D Initiates the rapid degradation of small, acid-soluble proteins during spore germination; germination protease 1000032..1001015 Clostridium beijerinckii NCIMB 8052 5292050 YP_001307963.1 CDS Cbei_0823 NC_009617.1 1001231 1002295 D PFAM: Stage II sporulation P family protein; KEGG: cpr:CPR_2012 stage II sporulation protein P; stage II sporulation P family protein 1001231..1002295 Clostridium beijerinckii NCIMB 8052 5292051 YP_001307964.1 CDS Cbei_0824 NC_009617.1 1002634 1002963 D hypothetical protein 1002634..1002963 Clostridium beijerinckii NCIMB 8052 5292052 YP_001307965.1 CDS Cbei_0825 NC_009617.1 1003129 1004940 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1003129..1004940 Clostridium beijerinckii NCIMB 8052 5292053 YP_001307966.1 CDS Cbei_0826 NC_009617.1 1005121 1005561 D KEGG: cpe:CPE1377 hypothetical protein; hypothetical protein 1005121..1005561 Clostridium beijerinckii NCIMB 8052 5292054 YP_001307967.1 CDS Cbei_0827 NC_009617.1 1005777 1006904 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1005777..1006904 Clostridium beijerinckii NCIMB 8052 5292055 YP_001307968.1 CDS hrcA NC_009617.1 1007143 1008171 D Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 1007143..1008171 Clostridium beijerinckii NCIMB 8052 5292056 YP_001307969.1 CDS Cbei_0829 NC_009617.1 1008209 1008832 D with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 1008209..1008832 Clostridium beijerinckii NCIMB 8052 5292057 YP_001307970.1 CDS dnaK NC_009617.1 1008938 1010782 D heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 1008938..1010782 Clostridium beijerinckii NCIMB 8052 5292058 YP_001307971.1 CDS Cbei_0831 NC_009617.1 1010893 1012026 D chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 1010893..1012026 Clostridium beijerinckii NCIMB 8052 5292059 YP_001307972.1 CDS Cbei_0832 NC_009617.1 1012187 1013737 D PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: cac:CAC0094 ferredoxin-nitrite reductase; nitrite and sulfite reductase 4Fe-4S subunit 1012187..1013737 Clostridium beijerinckii NCIMB 8052 5292060 YP_001307973.1 CDS trmB NC_009617.1 1014159 1014818 D tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 1014159..1014818 Clostridium beijerinckii NCIMB 8052 5292061 YP_001307974.1 CDS prmA NC_009617.1 1015518 1016462 D methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 1015518..1016462 Clostridium beijerinckii NCIMB 8052 5292062 YP_001307975.1 CDS Cbei_0835 NC_009617.1 1016669 1017436 D in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 1016669..1017436 Clostridium beijerinckii NCIMB 8052 5292063 YP_001307976.1 CDS Cbei_0836 NC_009617.1 1017541 1018839 D TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB; KEGG: cpr:CPR_1997 MiaB-like tRNA modifying enzyme; MiaB-like tRNA modifying protein 1017541..1018839 Clostridium beijerinckii NCIMB 8052 5292064 YP_001307977.1 CDS Cbei_0837 NC_009617.1 1018989 1019333 D PFAM: histidine triad (HIT) protein; KEGG: cpf:CPF_2281 HIT family protein; histidine triad (HIT) protein 1018989..1019333 Clostridium beijerinckii NCIMB 8052 5292065 YP_001307978.1 CDS rpsU NC_009617.1 1019476 1019652 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1019476..1019652 Clostridium beijerinckii NCIMB 8052 5292066 YP_001307979.1 CDS Cbei_0839 NC_009617.1 1019683 1020135 D PFAM: GatB/Yqey domain protein; KEGG: cpr:CPR_1994 GatB/YqeY domain protein; GatB/Yqey domain-containing protein 1019683..1020135 Clostridium beijerinckii NCIMB 8052 5292067 YP_001307980.1 CDS Cbei_0840 NC_009617.1 1020424 1020702 D PFAM: protein of unknown function DUF1429; KEGG: cno:NT01CX_0049 hypothetical protein; hypothetical protein 1020424..1020702 Clostridium beijerinckii NCIMB 8052 5292068 YP_001307981.1 CDS Cbei_0841 NC_009617.1 1020709 1021836 D PFAM: stage IV sporulation YqfD; KEGG: cpr:CPR_1992 stage IV sporulation protein; stage IV sporulation YqfD 1020709..1021836 Clostridium beijerinckii NCIMB 8052 5292069 YP_001307982.1 CDS Cbei_0842 NC_009617.1 1021897 1023981 D TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; metal-dependent phosphohydrolase, 7TM intracellular region; metal-dependent phosphohydrolase, 7TM extracellular region; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cpf:CPF_2276 hydrolase; metal dependent phosphohydrolase 1021897..1023981 Clostridium beijerinckii NCIMB 8052 5292070 YP_001307983.1 CDS Cbei_0843 NC_009617.1 1024008 1024511 D PFAM: protein of unknown function UPF0054; KEGG: cpf:CPF_2275 conserved hypothetical protein TIGR00043; metalloprotease 1024008..1024511 Clostridium beijerinckii NCIMB 8052 5292071 YP_001307984.1 CDS Cbei_0844 NC_009617.1 1024547 1025248 D PFAM: phosphoesterase, PA-phosphatase related; diacylglycerol kinase; KEGG: cpf:CPF_2274 diacylglycerol kinase/PAP2 family protein; diacylglycerol kinase 1024547..1025248 Clostridium beijerinckii NCIMB 8052 5292072 YP_001307985.1 CDS era NC_009617.1 1025504 1026400 D Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 1025504..1026400 Clostridium beijerinckii NCIMB 8052 5292073 YP_001307986.1 CDS recO NC_009617.1 1026465 1027214 D involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 1026465..1027214 Clostridium beijerinckii NCIMB 8052 5292074 YP_001307987.1 CDS Cbei_0847 NC_009617.1 1027221 1027850 D PFAM: ubiquitin-associated- domain-containing protein; KEGG: cpr:CPR_1985 N-terminal truncated of elongation factor Ts; ubiquitin-associated domain-containing protein 1027221..1027850 Clostridium beijerinckii NCIMB 8052 5292075 YP_001307988.1 CDS Cbei_0848 NC_009617.1 1028050 1028688 D PFAM: CBS domain containing protein; Helix-turn-helix, type 11 domain protein; KEGG: cpf:CPF_2269 CBS domain protein; signal-transduction protein 1028050..1028688 Clostridium beijerinckii NCIMB 8052 5292076 YP_001307989.1 CDS Cbei_0849 NC_009617.1 1028771 1031398 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 1028771..1031398 Clostridium beijerinckii NCIMB 8052 5292077 YP_001307990.1 CDS Cbei_0850 NC_009617.1 1031677 1032744 R TIGRFAM: Spore coat protein CotS; KEGG: ctc:CTC02013 spore coat protein S; spore coat protein CotS complement(1031677..1032744) Clostridium beijerinckii NCIMB 8052 5292078 YP_001307991.1 CDS Cbei_0851 NC_009617.1 1033074 1034099 D dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 1033074..1034099 Clostridium beijerinckii NCIMB 8052 5292079 YP_001307992.1 CDS dnaG NC_009617.1 1034376 1036166 D synthesizes RNA primers at the replication forks; DNA primase 1034376..1036166 Clostridium beijerinckii NCIMB 8052 5292080 YP_001307993.1 CDS Cbei_0853 NC_009617.1 1036172 1037302 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium; RNA polymerase sigma factor RpoD 1036172..1037302 Clostridium beijerinckii NCIMB 8052 5292081 YP_001307994.1 CDS Cbei_0854 NC_009617.1 1037533 1038225 D PFAM: protein of unknown function DUF633; KEGG: cpf:CPF_2262 hypothetical protein; hypothetical protein 1037533..1038225 Clostridium beijerinckii NCIMB 8052 5292082 YP_001307995.1 CDS Cbei_0855 NC_009617.1 1038237 1039028 D PFAM: protein of unknown function DUF34; KEGG: cpr:CPR_1972 conserved hypothetical protein TIGR00486; hypothetical protein 1038237..1039028 Clostridium beijerinckii NCIMB 8052 5292083 YP_001307996.1 CDS Cbei_0856 NC_009617.1 1039185 1039490 D hypothetical protein 1039185..1039490 Clostridium beijerinckii NCIMB 8052 5292084 YP_001307997.1 CDS Cbei_0857 NC_009617.1 1040265 1042115 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: cpf:CPF_2369 subtilase family protein; peptidase S8/S53 subtilisin kexin sedolisin 1040265..1042115 Clostridium beijerinckii NCIMB 8052 5296334 YP_001307998.1 CDS Cbei_0858 NC_009617.1 1042112 1043830 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: cpe:CPE2112 hypothetical protein; peptidase S8/S53 subtilisin kexin sedolisin 1042112..1043830 Clostridium beijerinckii NCIMB 8052 5292086 YP_001307999.1 CDS Cbei_0859 NC_009617.1 1043972 1044724 R PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: tte:TTE2700 predicted glutamine amidotransferases; peptidase C26 complement(1043972..1044724) Clostridium beijerinckii NCIMB 8052 5292087 YP_001308000.1 CDS Cbei_0860 NC_009617.1 1045162 1045929 D SMART: transglutaminase domain protein; KEGG: swo:Swol_0169 hypothetical protein; transglutaminase domain-containing protein 1045162..1045929 Clostridium beijerinckii NCIMB 8052 5292088 YP_001308001.1 CDS Cbei_0861 NC_009617.1 1046200 1047309 D PFAM: ABC transporter; TOBE domain protein; Transport-associated OB domain protein; SMART: ATPase AAA; KEGG: cpr:CPR_2340 ABC transporter domain protein; ABC transporter 1046200..1047309 Clostridium beijerinckii NCIMB 8052 5292089 YP_001308002.1 CDS Cbei_0862 NC_009617.1 1047340 1048284 D KEGG: cpf:CPF_2653 hypothetical protein; PucR family transcriptional regulator 1047340..1048284 Clostridium beijerinckii NCIMB 8052 5292090 YP_001308003.1 CDS Cbei_0863 NC_009617.1 1048695 1049711 D PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: cpe:CPE2340 probable transcriptional regulator; alanine racemase 1048695..1049711 Clostridium beijerinckii NCIMB 8052 5292091 YP_001308004.1 CDS Cbei_0864 NC_009617.1 1049799 1051292 D amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 1049799..1051292 Clostridium beijerinckii NCIMB 8052 5292092 YP_001308005.1 CDS Cbei_0865 NC_009617.1 1051295 1053655 D TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase, family 35; KEGG: cpf:CPF_2646 glycogen/starch/alpha-glucan phosphorylase; glycogen/starch/alpha-glucan phosphorylase 1051295..1053655 Clostridium beijerinckii NCIMB 8052 5292093 YP_001308006.1 CDS Cbei_0866 NC_009617.1 1053974 1054933 D Involved in the metabolism of aromatic amino acids; 2-hydroxyacid dehydrogenase 1053974..1054933 Clostridium beijerinckii NCIMB 8052 5292094 YP_001308007.1 CDS Cbei_0867 NC_009617.1 1055000 1055884 D KEGG: ehi:53.t00013 ribulose-phosphate 3-epimerase; hypothetical protein 1055000..1055884 Clostridium beijerinckii NCIMB 8052 5292095 YP_001308008.1 CDS Cbei_0868 NC_009617.1 1056195 1058363 D PFAM: TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein; KEGG: cpr:CPR_1950 DNA topoisomerase; DNA topoisomerase 1056195..1058363 Clostridium beijerinckii NCIMB 8052 5292096 YP_001308009.1 CDS Cbei_0869 NC_009617.1 1058427 1059317 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cpf:CPF_2925 oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR complement(1058427..1059317) Clostridium beijerinckii NCIMB 8052 5292097 YP_001308010.1 CDS Cbei_0870 NC_009617.1 1059610 1060476 D KEGG: tde:TDE0553 hypothetical protein; hypothetical protein 1059610..1060476 Clostridium beijerinckii NCIMB 8052 5292098 YP_001308011.1 CDS Cbei_0871 NC_009617.1 1060903 1062135 D TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: cac:CAC0682 ammonium transporter (membrane protein nrgA); ammonium transporter 1060903..1062135 Clostridium beijerinckii NCIMB 8052 5292099 YP_001308012.1 CDS Cbei_0872 NC_009617.1 1062609 1064609 D PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: cac:CAC2547 possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain; methyl-accepting chemotaxis sensory transducer 1062609..1064609 Clostridium beijerinckii NCIMB 8052 5292100 YP_001308013.1 CDS Cbei_0873 NC_009617.1 1064868 1065773 D PFAM: metallophosphoesterase; KEGG: cac:CAC2806 predicted phosphohydrolase, Icc family; metallophosphoesterase 1064868..1065773 Clostridium beijerinckii NCIMB 8052 5292101 YP_001308014.1 CDS Cbei_0874 NC_009617.1 1066488 1067222 D PFAM: transferase hexapeptide repeat containing protein; KEGG: cno:NT01CX_0958 maltose transacetylase; hexapaptide repeat-containing transferase 1066488..1067222 Clostridium beijerinckii NCIMB 8052 5292102 YP_001308015.1 CDS Cbei_0875 NC_009617.1 1067258 1069366 D PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: bat:BAS1867 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1067258..1069366 Clostridium beijerinckii NCIMB 8052 5292103 YP_001308016.1 CDS Cbei_0876 NC_009617.1 1069474 1070949 R TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+/solute symporter; KEGG: baa:BA_4188 sodium:solute symporter family; sodium/proline symporter complement(1069474..1070949) Clostridium beijerinckii NCIMB 8052 5292104 YP_001308017.1 CDS Cbei_0877 NC_009617.1 1071279 1071869 D KEGG: cac:CAC0620 ABC transporter periplasmic protein; ABC transporter substrate-binding protein 1071279..1071869 Clostridium beijerinckii NCIMB 8052 5292105 YP_001308018.1 CDS Cbei_0878 NC_009617.1 1071844 1073457 R PFAM: Resolvase, N-terminal domain; Recombinase; KEGG: cac:CAC1956 site-specific recombinases, DNA invertase Pin homolog; resolvase domain-containing protein complement(1071844..1073457) Clostridium beijerinckii NCIMB 8052 5292106 YP_001308019.1 CDS Cbei_0879 NC_009617.1 1073559 1074056 R PFAM: protein of unknown function DUF955; KEGG: cpf:CPF_1607 hypothetical protein; hypothetical protein complement(1073559..1074056) Clostridium beijerinckii NCIMB 8052 5292107 YP_001308020.1 CDS Cbei_0880 NC_009617.1 1074331 1075446 D KEGG: lwe:lwe1074 hypothetical protein; hypothetical protein 1074331..1075446 Clostridium beijerinckii NCIMB 8052 5292108 YP_001308021.1 CDS Cbei_0881 NC_009617.1 1075437 1076216 D hypothetical protein 1075437..1076216 Clostridium beijerinckii NCIMB 8052 5292109 YP_001308022.1 CDS Cbei_0882 NC_009617.1 1076251 1076931 D KEGG: ana:alr3663 unknown protein; hypothetical protein 1076251..1076931 Clostridium beijerinckii NCIMB 8052 5292110 YP_001308023.1 CDS Cbei_0883 NC_009617.1 1076938 1077351 D KEGG: smu:SMU.1772c hypothetical protein; hypothetical protein 1076938..1077351 Clostridium beijerinckii NCIMB 8052 5292111 YP_001308024.1 CDS Cbei_0884 NC_009617.1 1077807 1078640 R hypothetical protein complement(1077807..1078640) Clostridium beijerinckii NCIMB 8052 5292112 YP_001308025.1 CDS Cbei_0885 NC_009617.1 1078725 1080272 R KEGG: dps:DP1566 hypothetical protein; hypothetical protein complement(1078725..1080272) Clostridium beijerinckii NCIMB 8052 5292113 YP_001308026.1 CDS Cbei_0886 NC_009617.1 1080355 1080696 R PFAM: helix-turn-helix domain protein; KEGG: cpf:CPF_1604 DNA-binding protein; XRE family transcriptional regulator complement(1080355..1080696) Clostridium beijerinckii NCIMB 8052 5292114 YP_001308027.1 CDS Cbei_0887 NC_009617.1 1080855 1081055 D PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 1080855..1081055 Clostridium beijerinckii NCIMB 8052 5292115 YP_001308028.1 CDS Cbei_0888 NC_009617.1 1081108 1081539 D KEGG: chy:CHY_1694 prophage LambdaCh01, transcriptional regulator; prophage LambdaCh01, transcriptional regulator 1081108..1081539 Clostridium beijerinckii NCIMB 8052 5292116 YP_001308029.1 CDS Cbei_0889 NC_009617.1 1081569 1081760 D hypothetical protein 1081569..1081760 Clostridium beijerinckii NCIMB 8052 5292117 YP_001308030.1 CDS Cbei_0890 NC_009617.1 1081796 1082095 D hypothetical protein 1081796..1082095 Clostridium beijerinckii NCIMB 8052 5292118 YP_001308031.1 CDS Cbei_0891 NC_009617.1 1082185 1082367 D hypothetical protein 1082185..1082367 Clostridium beijerinckii NCIMB 8052 5292119 YP_001308032.1 CDS Cbei_0892 NC_009617.1 1082415 1083248 D KEGG: efa:EF2027 hypothetical protein; hypothetical protein 1082415..1083248 Clostridium beijerinckii NCIMB 8052 5292120 YP_001308033.1 CDS Cbei_0893 NC_009617.1 1083241 1084020 D KEGG: cno:NT01CX_2185 hypothetical protein; hypothetical protein 1083241..1084020 Clostridium beijerinckii NCIMB 8052 5292121 YP_001308034.1 CDS Cbei_0894 NC_009617.1 1084294 1084617 R hypothetical protein complement(1084294..1084617) Clostridium beijerinckii NCIMB 8052 5292122 YP_001308035.1 CDS Cbei_0895 NC_009617.1 1084823 1084969 D hypothetical protein 1084823..1084969 Clostridium beijerinckii NCIMB 8052 5292123 YP_001308036.1 CDS Cbei_0896 NC_009617.1 1085034 1085351 R hypothetical protein complement(1085034..1085351) Clostridium beijerinckii NCIMB 8052 5292124 YP_001308037.1 CDS Cbei_0897 NC_009617.1 1085395 1085706 R hypothetical protein complement(1085395..1085706) Clostridium beijerinckii NCIMB 8052 5292125 YP_001308038.1 CDS Cbei_0898 NC_009617.1 1086084 1086383 D hypothetical protein 1086084..1086383 Clostridium beijerinckii NCIMB 8052 5292126 YP_001308039.1 CDS Cbei_0899 NC_009617.1 1086742 1087134 D hypothetical protein 1086742..1087134 Clostridium beijerinckii NCIMB 8052 5292127 YP_001308040.1 CDS Cbei_0900 NC_009617.1 1087570 1088175 D PFAM: phage integrase family protein; KEGG: bat:BAS3811 prophage LambdaBa02, site-specific recombinase, phage integrase family; phage integrase family protein 1087570..1088175 Clostridium beijerinckii NCIMB 8052 5292128 YP_001308041.1 CDS Cbei_0901 NC_009617.1 1088382 1088561 D hypothetical protein 1088382..1088561 Clostridium beijerinckii NCIMB 8052 5292129 YP_001308042.1 CDS Cbei_0902 NC_009617.1 1088636 1089316 D KEGG: spm:spyM18_1304 hypothetical protein; hypothetical protein 1088636..1089316 Clostridium beijerinckii NCIMB 8052 5292130 YP_001308043.1 CDS Cbei_0903 NC_009617.1 1089442 1089747 D KEGG: bat:BAS0440 prophage LambdaBa04, GP54; prophage LambdaBa04, GP54 1089442..1089747 Clostridium beijerinckii NCIMB 8052 5292131 YP_001308044.1 CDS Cbei_0904 NC_009617.1 1089740 1089922 D hypothetical protein 1089740..1089922 Clostridium beijerinckii NCIMB 8052 5292132 YP_001308045.1 CDS Cbei_0905 NC_009617.1 1089953 1090390 D KEGG: bcz:BCZK3430 hypothetical protein; hypothetical protein 1089953..1090390 Clostridium beijerinckii NCIMB 8052 5292133 YP_001308046.1 CDS Cbei_0906 NC_009617.1 1090390 1092054 D PFAM: phage Terminase; KEGG: bat:BAS0443 prophage LambdaBa04, terminase, large subunit; phage terminase 1090390..1092054 Clostridium beijerinckii NCIMB 8052 5292134 YP_001308047.1 CDS Cbei_0907 NC_009617.1 1092072 1093295 D PFAM: phage portal protein; KEGG: bat:BAS3509 hypothetical protein; phage portal protein 1092072..1093295 Clostridium beijerinckii NCIMB 8052 5292135 YP_001308048.1 CDS Cbei_0908 NC_009617.1 1093246 1093839 D TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35, phage prohead HK97; KEGG: cpf:CPF_1585 phage prohead protease, HK97 family; HK97 family phage prohead protease 1093246..1093839 Clostridium beijerinckii NCIMB 8052 5292136 YP_001308049.1 CDS Cbei_0909 NC_009617.1 1093859 1095061 D TIGRFAM: phage major capsid protein, HK97 family; PFAM: phage major capsid protein, HK97; KEGG: bat:BAS0446 prophage LambdaBa04, major capsid protein; HK97 family phage major capsid protein 1093859..1095061 Clostridium beijerinckii NCIMB 8052 5292137 YP_001308050.1 CDS Cbei_0910 NC_009617.1 1095161 1095445 D TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: bat:BAS0448 prophage LambdaBa04, DNA packaging protein; phage protein 1095161..1095445 Clostridium beijerinckii NCIMB 8052 5292138 YP_001308051.1 CDS Cbei_0911 NC_009617.1 1095442 1095780 D TIGRFAM: phage head-tail adaptor; phage head-tail adaptor 1095442..1095780 Clostridium beijerinckii NCIMB 8052 5292139 YP_001308052.1 CDS Cbei_0912 NC_009617.1 1095785 1096240 D hypothetical protein 1095785..1096240 Clostridium beijerinckii NCIMB 8052 5292140 YP_001308053.1 CDS Cbei_0913 NC_009617.1 1096242 1096733 D hypothetical protein 1096242..1096733 Clostridium beijerinckii NCIMB 8052 5292141 YP_001308054.1 CDS Cbei_0914 NC_009617.1 1096744 1097835 D KEGG: ctc:CTC02125 phage-like element pbsx protein XkdK; hypothetical protein 1096744..1097835 Clostridium beijerinckii NCIMB 8052 5292142 YP_001308055.1 CDS Cbei_0915 NC_009617.1 1097855 1098286 D KEGG: ctc:CTC02124 phage-like element pbsx protein XkdM; phage-like element pbsx protein XkdM 1097855..1098286 Clostridium beijerinckii NCIMB 8052 5292143 YP_001308056.1 CDS Cbei_0916 NC_009617.1 1098348 1098758 D hypothetical protein 1098348..1098758 Clostridium beijerinckii NCIMB 8052 5292144 YP_001308057.1 CDS Cbei_0917 NC_009617.1 1099046 1099999 D KEGG: mac:MA3805 hypothetical protein; hypothetical protein 1099046..1099999 Clostridium beijerinckii NCIMB 8052 5292145 YP_001308058.1 CDS Cbei_0918 NC_009617.1 1100203 1101060 D KEGG: lin:lin0168 hypothetical protein; hypothetical protein 1100203..1101060 Clostridium beijerinckii NCIMB 8052 5292146 YP_001308059.1 CDS Cbei_0919 NC_009617.1 1101076 1101843 D PFAM: cell wall binding repeat-containing protein; KEGG: spn:SP_0377 choline binding protein C; cell wall binding repeat-containing protein 1101076..1101843 Clostridium beijerinckii NCIMB 8052 5292147 YP_001308060.1 CDS Cbei_0920 NC_009617.1 1101852 1102763 D KEGG: ctc:CTC02117 phage-like element pbsx protein XkdQ; hypothetical protein 1101852..1102763 Clostridium beijerinckii NCIMB 8052 5292148 YP_001308061.1 CDS Cbei_0921 NC_009617.1 1102772 1103092 D hypothetical protein 1102772..1103092 Clostridium beijerinckii NCIMB 8052 5292149 YP_001308062.1 CDS Cbei_0922 NC_009617.1 1103109 1103555 D KEGG: ctc:CTC02116 phage-like element pbsx protein XkdS; hypothetical protein 1103109..1103555 Clostridium beijerinckii NCIMB 8052 5292150 YP_001308063.1 CDS Cbei_0923 NC_009617.1 1103558 1104625 D PFAM: Baseplate J family protein; KEGG: ctc:CTC02115 phage-like element pbsx protein XkdT; baseplate J family protein 1103558..1104625 Clostridium beijerinckii NCIMB 8052 5292151 YP_001308064.1 CDS Cbei_0924 NC_009617.1 1104627 1106450 D KEGG: ctc:CTC02114 hypothetical protein; hypothetical protein 1104627..1106450 Clostridium beijerinckii NCIMB 8052 5292152 YP_001308065.1 CDS Cbei_0925 NC_009617.1 1106452 1107057 D KEGG: ctc:CTC02112 phage-like element pbsx protein XkdT; phage-like element pbsx protein XkdT 1106452..1107057 Clostridium beijerinckii NCIMB 8052 5292153 YP_001308066.1 CDS Cbei_0926 NC_009617.1 1107072 1108550 D KEGG: gka:GK0543 hypothetical protein; hypothetical protein 1107072..1108550 Clostridium beijerinckii NCIMB 8052 5292154 YP_001308067.1 CDS Cbei_0927 NC_009617.1 1108578 1108850 D hypothetical protein 1108578..1108850 Clostridium beijerinckii NCIMB 8052 5292155 YP_001308068.1 CDS Cbei_0928 NC_009617.1 1108843 1109058 D hypothetical protein 1108843..1109058 Clostridium beijerinckii NCIMB 8052 5292156 YP_001308069.1 CDS Cbei_0929 NC_009617.1 1109236 1109472 D KEGG: cpr:CPR_C0053 hypothetical protein; hypothetical protein 1109236..1109472 Clostridium beijerinckii NCIMB 8052 5292157 YP_001308070.1 CDS Cbei_0930 NC_009617.1 1109488 1109883 D KEGG: cpf:CPF_0972 hypothetical protein; hypothetical protein 1109488..1109883 Clostridium beijerinckii NCIMB 8052 5292158 YP_001308071.1 CDS Cbei_0931 NC_009617.1 1109954 1110742 D PFAM: glycoside hydrolase, family 25; KEGG: cpf:CPF_0973 glycosyl hydrolase, family 25; glycoside hydrolase 1109954..1110742 Clostridium beijerinckii NCIMB 8052 5292159 YP_001308072.1 CDS Cbei_0932 NC_009617.1 1111208 1111570 R PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator complement(1111208..1111570) Clostridium beijerinckii NCIMB 8052 5292160 YP_001308073.1 CDS Cbei_0933 NC_009617.1 1111658 1112134 D KEGG: cno:NT01CX_1709 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein 1111658..1112134 Clostridium beijerinckii NCIMB 8052 5292161 YP_001308074.1 CDS Cbei_0934 NC_009617.1 1112169 1112936 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC0619 nitrate ABC transporter ATP binding protein; ABC transporter 1112169..1112936 Clostridium beijerinckii NCIMB 8052 5292162 YP_001308075.1 CDS Cbei_0935 NC_009617.1 1112968 1113759 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cno:NT01CX_1706 ABC transporter permease, cysTW family; binding-protein-dependent transport system inner membrane protein 1112968..1113759 Clostridium beijerinckii NCIMB 8052 5292163 YP_001308076.1 CDS Cbei_0936 NC_009617.1 1114063 1114419 D PFAM: LrgA family protein; KEGG: ctc:CTC01825 conserved protein, murein hydrolase exporter; LrgA family protein 1114063..1114419 Clostridium beijerinckii NCIMB 8052 5292164 YP_001308077.1 CDS Cbei_0937 NC_009617.1 1114459 1115172 D PFAM: LrgB family protein; KEGG: cpr:CPR_1948 LrgB-like family protein; LrgB family protein 1114459..1115172 Clostridium beijerinckii NCIMB 8052 5292165 YP_001308078.1 CDS Cbei_0938 NC_009617.1 1115508 1116644 D KEGG: pfa:MAL13P1.137 hypothetical malaria antigen; hypothetical protein 1115508..1116644 Clostridium beijerinckii NCIMB 8052 5292166 YP_001308079.1 CDS Cbei_0939 NC_009617.1 1116818 1117867 R KEGG: cpr:CPR_1341 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein complement(1116818..1117867) Clostridium beijerinckii NCIMB 8052 5292167 YP_001308080.1 CDS Cbei_0940 NC_009617.1 1118041 1118625 R PFAM: flavin reductase domain protein, FMN-binding; KEGG: cac:CAC2437 hypothetical protein; flavin reductase domain-containing protein complement(1118041..1118625) Clostridium beijerinckii NCIMB 8052 5292168 YP_001308081.1 CDS Cbei_0941 NC_009617.1 1118731 1120053 R PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; KEGG: ctc:CTC00981 D-alanyl-D-alanine carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase complement(1118731..1120053) Clostridium beijerinckii NCIMB 8052 5292169 YP_001308082.1 CDS Cbei_0942 NC_009617.1 1120219 1120941 R PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: cpr:CPR_1207 glutamine amidotransferase, CobB/CobQ family; glutamine amidotransferase complement(1120219..1120941) Clostridium beijerinckii NCIMB 8052 5292170 YP_001308083.1 CDS Cbei_0943 NC_009617.1 1120960 1122318 R PFAM: Mur ligase, middle domain protein; domain of unknown function DUF1727; KEGG: cpf:CPF_1392 UDP-N-acetylmuramyl tripeptide synthetase MurC-like protein; hypothetical protein complement(1120960..1122318) Clostridium beijerinckii NCIMB 8052 5292171 YP_001308084.1 CDS Cbei_0944 NC_009617.1 1122593 1124557 D PFAM: protein of unknown function DUF710; KEGG: ehi:82.t00025 viral A-type inclusion protein repeat, Pfam: Nha1_C Rho_Binding ERM Prefoldin_2 WXG100 Vicilin_N TBPIP Myosin_tail_1 Filament YscO Bacillus_HBL HAP1_N EzrA DUF948 Rab5-bind Laminin_I MpPF2 MSG Spectrin LMP PROSITE: GLU_RICH LYS_RICH; hypothetical protein 1122593..1124557 Clostridium beijerinckii NCIMB 8052 5292172 YP_001308085.1 CDS Cbei_0945 NC_009617.1 1124574 1126934 D PFAM: peptidase U32; KEGG: cpr:CPR_1848 peptidase, U32 family; peptidase U32 1124574..1126934 Clostridium beijerinckii NCIMB 8052 5292173 YP_001308086.1 CDS Cbei_0946 NC_009617.1 1127088 1129448 D MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein 1127088..1129448 Clostridium beijerinckii NCIMB 8052 5292174 YP_001308087.1 CDS Cbei_0947 NC_009617.1 1129624 1130352 D PFAM: protein of unknown function DUF523; KEGG: ctc:CTC02272 purine nucleoside phosphorylase; hypothetical protein 1129624..1130352 Clostridium beijerinckii NCIMB 8052 5292175 YP_001308088.1 CDS Cbei_0948 NC_009617.1 1130634 1131269 R KEGG: cac:CAC0750 hypothetical protein; hypothetical protein complement(1130634..1131269) Clostridium beijerinckii NCIMB 8052 5292176 YP_001308089.1 CDS Cbei_0949 NC_009617.1 1131730 1132530 D PFAM: glycoside hydrolase, family 46; KEGG: bsu:BG11923 chitosanase; glycoside hydrolase 1131730..1132530 Clostridium beijerinckii NCIMB 8052 5292177 YP_001308090.1 CDS Cbei_0950 NC_009617.1 1133610 1134866 D TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system, EIIC; KEGG: ppe:PEPE_0023 cellobiose-specific PTS system IIC component; PTS system lactose/cellobiose family transporter subunit IIC 1133610..1134866 Clostridium beijerinckii NCIMB 8052 5292178 YP_001308091.1 CDS Cbei_0951 NC_009617.1 1134917 1135225 D PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: tte:TTE0335 Phosphotransferase system cellobiose-specific component IIB; phosphotransferase system, lactose/cellobiose-specific IIB subunit 1134917..1135225 Clostridium beijerinckii NCIMB 8052 5292179 YP_001308092.1 CDS Cbei_0952 NC_009617.1 1135239 1135577 D PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: tte:TTE0336 Phosphotransferase system cellobiose-specific component IIA; PTS system lactose/cellobiose-specific transporter subunit IIA 1135239..1135577 Clostridium beijerinckii NCIMB 8052 5292180 YP_001308093.1 CDS Cbei_0953 NC_009617.1 1135777 1138476 D PFAM: sigma-54 factor, interaction domain-containing protein; PTS system fructose subfamily IIA component; PRD domain protein; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; KEGG: tte:TTE0331 NtrC family transcriptional regulator, ATPase domain; sigma-54 factor interaction domain-containing protein 1135777..1138476 Clostridium beijerinckii NCIMB 8052 5292181 YP_001308094.1 CDS Cbei_0954 NC_009617.1 1138631 1141405 D PFAM: sigma-54 factor, interaction domain-containing protein; PRD domain protein; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; KEGG: stm:STM4534 transcriptional regulator; sigma-54 factor interaction domain-containing protein 1138631..1141405 Clostridium beijerinckii NCIMB 8052 5292182 YP_001308095.1 CDS Cbei_0955 NC_009617.1 1141528 1141950 D PFAM: PTS system fructose subfamily IIA component; KEGG: stm:STM4535 PTS system, mannose-specific II component; PTS system fructose subfamily transporter subunit IIA 1141528..1141950 Clostridium beijerinckii NCIMB 8052 5292183 YP_001308096.1 CDS Cbei_0956 NC_009617.1 1141965 1142435 D PFAM: PTS system sorbose subfamily IIB component; KEGG: stm:STM4536 PTS system, mannose-specific II component; PTS system sorbose subfamily transporter subunit IIB 1141965..1142435 Clostridium beijerinckii NCIMB 8052 5292184 YP_001308097.1 CDS Cbei_0957 NC_009617.1 1142450 1143214 D PFAM: phosphotransferase system PTS, sorbose-specific IIC subunit; KEGG: lmf:LMOf2365_2024 PTS system, IIC component; PTS system sorbose-specific transporter subunit IIC 1142450..1143214 Clostridium beijerinckii NCIMB 8052 5292185 YP_001308098.1 CDS Cbei_0958 NC_009617.1 1143201 1144040 D PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: fnu:FN0629 PTS system, IID component; PTS system mannose/fructose/sorbose family transporter subunit IID 1143201..1144040 Clostridium beijerinckii NCIMB 8052 5292186 YP_001308099.1 CDS Cbei_0959 NC_009617.1 1144108 1145106 D PFAM: sugar isomerase (SIS); KEGG: fnu:FN0627 glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; sugar isomerase (SIS) 1144108..1145106 Clostridium beijerinckii NCIMB 8052 5292187 YP_001308100.1 CDS Cbei_0960 NC_009617.1 1145178 1146041 D PFAM: PfkB domain protein; KEGG: aau:AAur_0441 sugar kinase; ribokinase-like domain-containing protein 1145178..1146041 Clostridium beijerinckii NCIMB 8052 5292188 YP_001308101.1 CDS Cbei_0961 NC_009617.1 1146248 1147117 R PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: bha:BH3372 hypothetical protein; phosphotransferase domain-containing protein complement(1146248..1147117) Clostridium beijerinckii NCIMB 8052 5292189 YP_001308102.1 CDS Cbei_0962 NC_009617.1 1147542 1150301 D PFAM: sigma-54 factor, interaction domain-containing protein; ATPase AAA, central domain protein; PRD domain protein; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; KEGG: tte:TTE0191 AAA superfamily ATPase with N-terminal receiver domain; sigma-54 factor interaction domain-containing protein 1147542..1150301 Clostridium beijerinckii NCIMB 8052 5292190 YP_001308103.1 CDS Cbei_0963 NC_009617.1 1150413 1150853 D PFAM: PTS system fructose subfamily IIA component; KEGG: bcl:ABC4070 PTS system, mannose-specific enzyme II, A component; PTS system fructose subfamily transporter subunit IIA 1150413..1150853 Clostridium beijerinckii NCIMB 8052 5292191 YP_001308104.1 CDS Cbei_0964 NC_009617.1 1150831 1151310 D PFAM: PTS system sorbose subfamily IIB component; KEGG: bcl:ABC4071 PTS system, mannose-specific enzyme II, B component; PTS system sorbose subfamily transporter subunit IIB 1150831..1151310 Clostridium beijerinckii NCIMB 8052 5292192 YP_001308105.1 CDS Cbei_0965 NC_009617.1 1151329 1152120 D PFAM: phosphotransferase system PTS, sorbose-specific IIC subunit; KEGG: stm:STM0575 PTS system, mannose-specific II component; PTS system sorbose-specific transporter subunit IIC 1151329..1152120 Clostridium beijerinckii NCIMB 8052 5292193 YP_001308106.1 CDS Cbei_0966 NC_009617.1 1152113 1152913 D PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: bcl:ABC4073 PTS system, mannose-specific enzyme II, D component; PTS system mannose/fructose/sorbose family transporter subunit IID 1152113..1152913 Clostridium beijerinckii NCIMB 8052 5292194 YP_001308107.1 CDS Cbei_0967 NC_009617.1 1152942 1153997 D PFAM: sugar isomerase (SIS); KEGG: stm:STM0573 inner membrane protein; sugar isomerase (SIS) 1152942..1153997 Clostridium beijerinckii NCIMB 8052 5292195 YP_001308108.1 CDS Cbei_0968 NC_009617.1 1154253 1155731 R PFAM: polysaccharide biosynthesis protein; KEGG: cpf:CPF_0604 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(1154253..1155731) Clostridium beijerinckii NCIMB 8052 5292196 YP_001308109.1 CDS Cbei_0969 NC_009617.1 1155912 1156778 D PFAM: helix-turn-helix domain protein; KEGG: cac:CAC0465 predicted transcriptional regulator, DicA/HipB/AnsR family; helix-turn-helix domain-containing protein 1155912..1156778 Clostridium beijerinckii NCIMB 8052 5292197 YP_001308110.1 CDS Cbei_0970 NC_009617.1 1156951 1159167 R PFAM: peptidase M56, BlaR1; KEGG: tte:TTE1079 beta-lactamase regulatory protein 1; peptidase M56, BlaR1 complement(1156951..1159167) Clostridium beijerinckii NCIMB 8052 5292198 YP_001308111.1 CDS Cbei_0971 NC_009617.1 1159314 1159709 R PFAM: Penicillinase repressor; KEGG: bcl:ABC0266 methicillin resistance regulatory protein MecI; CopY family transcriptional regulator complement(1159314..1159709) Clostridium beijerinckii NCIMB 8052 5292199 YP_001308112.1 CDS Cbei_0972 NC_009617.1 1160005 1162944 D PFAM: SNF2-related protein; helicase domain protein; type III restriction protein, res subunit; zinc finger, SWIM domain protein; SNF2 helicase associated domain protein; SMART: DEAD-like helicases-like; KEGG: cac:CAC3441 DNA/RNA helicase, SNF2; non-specific serine/threonine protein kinase 1160005..1162944 Clostridium beijerinckii NCIMB 8052 5292200 YP_001308113.1 CDS Cbei_0973 NC_009617.1 1163230 1164096 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: lwe:lwe2648 phosphosugar-binding transcriptional regulator, RpiR family; RpiR family transcriptional regulator complement(1163230..1164096) Clostridium beijerinckii NCIMB 8052 5292201 YP_001308114.1 CDS Cbei_0974 NC_009617.1 1164671 1165498 D TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: lsl:LSL_1476 hydrolase, HAD superfamily; cof family hydrolase 1164671..1165498 Clostridium beijerinckii NCIMB 8052 5292202 YP_001308115.1 CDS Cbei_0975 NC_009617.1 1165539 1166324 D TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: oih:OB0554 histidinol phosphatase; HisJ family histidinol phosphate phosphatase 1165539..1166324 Clostridium beijerinckii NCIMB 8052 5292203 YP_001308116.1 CDS Cbei_0976 NC_009617.1 1166565 1167077 D PFAM: GCN5-related N-acetyltransferase; KEGG: bcz:BCZK2535 phosphinothricin N-acetyltransferase; N-acetyltransferase GCN5 1166565..1167077 Clostridium beijerinckii NCIMB 8052 5292204 YP_001308117.1 CDS Cbei_0977 NC_009617.1 1167177 1168412 R PFAM: major facilitator superfamily MFS_1; KEGG: btl:BALH_2365 macrolide efflux protein; major facilitator superfamily transporter complement(1167177..1168412) Clostridium beijerinckii NCIMB 8052 5292205 YP_001308118.1 CDS Cbei_0978 NC_009617.1 1168583 1170037 D PFAM: major facilitator superfamily MFS_1; KEGG: dsy:DSY0578 hypothetical protein; major facilitator superfamily transporter 1168583..1170037 Clostridium beijerinckii NCIMB 8052 5292206 YP_001308119.1 CDS Cbei_0979 NC_009617.1 1170378 1170926 R KEGG: cpr:CPR_1191 hypothetical protein; hypothetical protein complement(1170378..1170926) Clostridium beijerinckii NCIMB 8052 5292207 YP_001308120.1 CDS Cbei_0980 NC_009617.1 1171205 1172434 D TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: cpr:CPR_0204 nuclease SbcCD, D subunit; nuclease SbcCD subunit D 1171205..1172434 Clostridium beijerinckii NCIMB 8052 5292208 YP_001308121.1 CDS Cbei_0981 NC_009617.1 1172409 1175900 D PFAM: SMC domain protein; KEGG: cac:CAC2736 ATPase involved in DNA repair; SMC domain-containing protein 1172409..1175900 Clostridium beijerinckii NCIMB 8052 5292209 YP_001308122.1 CDS Cbei_0982 NC_009617.1 1176228 1176797 D TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25; KEGG: cpf:CPF_2128 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 1176228..1176797 Clostridium beijerinckii NCIMB 8052 5292210 YP_001308123.1 CDS Cbei_0983 NC_009617.1 1177109 1178836 D PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: cpr:CPR_1841 phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/subunit 1177109..1178836 Clostridium beijerinckii NCIMB 8052 5292211 YP_001308124.1 CDS Cbei_0984 NC_009617.1 1179374 1180474 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cno:NT01CX_1777 TPR repeats containing protein; hypothetical protein 1179374..1180474 Clostridium beijerinckii NCIMB 8052 5292212 YP_001308125.1 CDS Cbei_0985 NC_009617.1 1180597 1181322 D TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: cno:NT01CX_1798 teichoic acid biosynthesis protein A; WecB/TagA/CpsF family glycosyl transferase 1180597..1181322 Clostridium beijerinckii NCIMB 8052 5292213 YP_001308126.1 CDS Cbei_0986 NC_009617.1 1181367 1182893 D TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: cno:NT01CX_1790 integral membrane protein MviN; integral membrane protein MviN 1181367..1182893 Clostridium beijerinckii NCIMB 8052 5292214 YP_001308127.1 CDS Cbei_0987 NC_009617.1 1182905 1184194 D KEGG: cpe:CPE1869 hypothetical protein; hypothetical protein 1182905..1184194 Clostridium beijerinckii NCIMB 8052 5292215 YP_001308128.1 CDS Cbei_0988 NC_009617.1 1184195 1185358 D PFAM: glycosyl transferase, group 1; KEGG: bth:BT_2936 glycosyltransferase; group 1 glycosyl transferase 1184195..1185358 Clostridium beijerinckii NCIMB 8052 5292216 YP_001308129.1 CDS Cbei_0989 NC_009617.1 1185342 1186565 D PFAM: O-antigen polymerase; KEGG: cac:CAC2318 membrane protein of ExoQ family, involved in exopolysaccharide production; O-antigen polymerase 1185342..1186565 Clostridium beijerinckii NCIMB 8052 5292217 YP_001308130.1 CDS Cbei_0990 NC_009617.1 1186622 1187272 D PFAM: Formiminotransferase-cyclodeaminase; KEGG: cno:NT01CX_1802 formiminotransferase- cyclodeaminase/formiminotetrahydrofolate cyclodeaminase; formiminotransferase-cyclodeaminase 1186622..1187272 Clostridium beijerinckii NCIMB 8052 5292218 YP_001308131.1 CDS Cbei_0991 NC_009617.1 1187348 1187500 R hypothetical protein complement(1187348..1187500) Clostridium beijerinckii NCIMB 8052 5292219 YP_001308132.1 CDS Cbei_0992 NC_009617.1 1187743 1188240 D hypothetical protein 1187743..1188240 Clostridium beijerinckii NCIMB 8052 5292220 YP_001308133.1 CDS Cbei_0993 NC_009617.1 1188496 1189383 R TIGRFAM: Delta-lactam-biosynthetic de-N-acetylase; PFAM: polysaccharide deacetylase; KEGG: cpr:CPR_1836 polysaccharide deacetylase (nodulation protein NodB); Delta-lactam-biosynthetic de-N-acetylase complement(1188496..1189383) Clostridium beijerinckii NCIMB 8052 5292221 YP_001308134.1 CDS Cbei_0994 NC_009617.1 1189944 1191041 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 1189944..1191041 Clostridium beijerinckii NCIMB 8052 5292222 YP_001308135.1 CDS Cbei_0995 NC_009617.1 1191495 1193315 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ctc:CTC00543 hypothetical protein; hypothetical protein 1191495..1193315 Clostridium beijerinckii NCIMB 8052 5292223 YP_001308136.1 CDS Cbei_0996 NC_009617.1 1193384 1194361 D TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase, type I; KEGG: cpr:CPR_1205 mannose-6-phosphate isomerase, class I; mannose-6-phosphate isomerase 1193384..1194361 Clostridium beijerinckii NCIMB 8052 5292224 YP_001308137.1 CDS Cbei_0997 NC_009617.1 1194692 1195552 D BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 1194692..1195552 Clostridium beijerinckii NCIMB 8052 5292225 YP_001308138.1 CDS Cbei_0998 NC_009617.1 1196228 1197325 D PFAM: phosphofructokinase; KEGG: cpe:CPE1185 6-phosphofructokinase; 6-phosphofructokinase 1196228..1197325 Clostridium beijerinckii NCIMB 8052 5292226 YP_001308139.1 CDS Cbei_0999 NC_009617.1 1197420 1198196 D KEGG: cpr:CPR_1202 beta-lactamase; beta-lactamase 1197420..1198196 Clostridium beijerinckii NCIMB 8052 5292227 YP_001308140.1 CDS pyrB NC_009617.1 1198499 1199425 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 1198499..1199425 Clostridium beijerinckii NCIMB 8052 5292228 YP_001308141.1 CDS Cbei_1001 NC_009617.1 1199427 1199858 D involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase regulatory subunit 1199427..1199858 Clostridium beijerinckii NCIMB 8052 5292229 YP_001308142.1 CDS Cbei_1002 NC_009617.1 1199878 1201113 D TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; KEGG: cpr:CPR_1200 dihydroorotase, multifunctional complex type; dihydroorotase 1199878..1201113 Clostridium beijerinckii NCIMB 8052 5292230 YP_001308143.1 CDS pyrF NC_009617.1 1201509 1202381 D type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 1201509..1202381 Clostridium beijerinckii NCIMB 8052 5292231 YP_001308144.1 CDS Cbei_1004 NC_009617.1 1202417 1203160 D responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+); dihydroorotate dehydrogenase electron transfer subunit 1202417..1203160 Clostridium beijerinckii NCIMB 8052 5292232 YP_001308145.1 CDS Cbei_1005 NC_009617.1 1203182 1204078 D catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B 1203182..1204078 Clostridium beijerinckii NCIMB 8052 5292233 YP_001308146.1 CDS pyrE NC_009617.1 1204170 1204844 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 1204170..1204844 Clostridium beijerinckii NCIMB 8052 5292234 YP_001308147.1 CDS Cbei_1007 NC_009617.1 1205539 1206300 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 1205539..1206300 Clostridium beijerinckii NCIMB 8052 5292235 YP_001308148.1 CDS Cbei_1008 NC_009617.1 1206333 1207715 R KEGG: cpr:CPR_0627 hypothetical protein; hypothetical protein complement(1206333..1207715) Clostridium beijerinckii NCIMB 8052 5292236 YP_001308149.1 CDS Cbei_1009 NC_009617.1 1208359 1210590 D TIGRFAM: formate acetyltransferase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL; KEGG: cpr:CPR_1169 formate acetyltransferase; formate acetyltransferase 1208359..1210590 Clostridium beijerinckii NCIMB 8052 5292237 YP_001308150.1 CDS Cbei_1010 NC_009617.1 1210933 1211658 D TIGRFAM: pyruvate formate-lyase activating enzyme; PFAM: Radical SAM domain protein; KEGG: cpr:CPR_1170 pyruvate formate-lyase activating enzyme; pyruvate formate-lyase activating enzyme 1210933..1211658 Clostridium beijerinckii NCIMB 8052 5292238 YP_001308151.1 CDS Cbei_1011 NC_009617.1 1212099 1214330 D TIGRFAM: formate acetyltransferase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL; KEGG: cpr:CPR_1169 formate acetyltransferase; formate acetyltransferase 1212099..1214330 Clostridium beijerinckii NCIMB 8052 5292239 YP_001308152.1 CDS Cbei_1012 NC_009617.1 1214565 1214726 R PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: cth:Cthe_2164 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein complement(1214565..1214726) Clostridium beijerinckii NCIMB 8052 5292240 YP_001308153.1 CDS Cbei_1013 NC_009617.1 1214887 1215516 R PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: cpf:CPF_1920 DNA polymerase III, epsilon subunit; exonuclease complement(1214887..1215516) Clostridium beijerinckii NCIMB 8052 5292241 YP_001308154.1 CDS Cbei_1014 NC_009617.1 1215791 1216741 D TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; KEGG: ctc:CTC01998 L-lactate dehydrogenase; L-lactate dehydrogenase 1215791..1216741 Clostridium beijerinckii NCIMB 8052 5292242 YP_001308155.1 CDS Cbei_1015 NC_009617.1 1217500 1218471 R TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; Helix-turn-helix, type 11 domain protein; KEGG: cno:NT01CX_0898 BirA bifunctional protein; biotin--acetyl-CoA-carboxylase ligase complement(1217500..1218471) Clostridium beijerinckii NCIMB 8052 5292243 YP_001308156.1 CDS Cbei_1016 NC_009617.1 1218621 1219691 D KEGG: cpf:CPF_2255 hypothetical protein; hypothetical protein 1218621..1219691 Clostridium beijerinckii NCIMB 8052 5292244 YP_001308157.1 CDS Cbei_1017 NC_009617.1 1219712 1220758 D KEGG: ctc:CTC00792 hypothetical protein; hypothetical protein 1219712..1220758 Clostridium beijerinckii NCIMB 8052 5292245 YP_001308158.1 CDS Cbei_1018 NC_009617.1 1221242 1221883 D PFAM: peptidase M50; KEGG: ctc:CTC00793 protein with metal dependent protease domain; peptidase M50 1221242..1221883 Clostridium beijerinckii NCIMB 8052 5292246 YP_001308159.1 CDS argS NC_009617.1 1222399 1224090 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1222399..1224090 Clostridium beijerinckii NCIMB 8052 5292247 YP_001308160.1 CDS Cbei_1020 NC_009617.1 1224308 1225453 D PFAM: protein of unknown function UPF0118; KEGG: ctc:CTC01775 permease; hypothetical protein 1224308..1225453 Clostridium beijerinckii NCIMB 8052 5292248 YP_001308161.1 CDS Cbei_1021 NC_009617.1 1225483 1226019 D PFAM: nitroreductase; KEGG: cpr:CPR_0997 nitroreductase; nitroreductase 1225483..1226019 Clostridium beijerinckii NCIMB 8052 5292249 YP_001308162.1 CDS Cbei_1022 NC_009617.1 1226281 1227009 D TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: ctc:CTC00969 phosphoserine phosphatase; HAD family hydrolase 1226281..1227009 Clostridium beijerinckii NCIMB 8052 5292250 YP_001308163.1 CDS Cbei_1023 NC_009617.1 1227024 1227773 D KEGG: cno:NT01CX_1593 hypothetical protein; hypothetical protein 1227024..1227773 Clostridium beijerinckii NCIMB 8052 5292251 YP_001308164.1 CDS Cbei_1024 NC_009617.1 1227930 1228811 R PFAM: beta-lactamase domain protein; KEGG: cpe:CPE1657 probable late competence protein; beta-lactamase domain-containing protein complement(1227930..1228811) Clostridium beijerinckii NCIMB 8052 5292252 YP_001308165.1 CDS Cbei_1025 NC_009617.1 1229158 1230960 D KEGG: cpe:CPE1656 hypothetical protein; hypothetical protein 1229158..1230960 Clostridium beijerinckii NCIMB 8052 5292253 YP_001308166.1 CDS Cbei_1026 NC_009617.1 1231155 1231913 R PFAM: protein of unknown function DUF1113; KEGG: cpf:CPF_1398 hypothetical protein; hypothetical protein complement(1231155..1231913) Clostridium beijerinckii NCIMB 8052 5292254 YP_001308167.1 CDS Cbei_1027 NC_009617.1 1232133 1232333 R PFAM: protein of unknown function DUF378; KEGG: cno:NT01CX_0131 hypothetical protein; hypothetical protein complement(1232133..1232333) Clostridium beijerinckii NCIMB 8052 5292255 YP_001308168.1 CDS Cbei_1028 NC_009617.1 1232408 1232878 R PFAM: regulatory protein, AsnC/Lrp family; KEGG: cpr:CPR_1625 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(1232408..1232878) Clostridium beijerinckii NCIMB 8052 5292256 YP_001308169.1 CDS Cbei_1029 NC_009617.1 1233126 1233446 D KEGG: cpf:CPF_1905 hypothetical protein; hypothetical protein 1233126..1233446 Clostridium beijerinckii NCIMB 8052 5292257 YP_001308170.1 CDS Cbei_1030 NC_009617.1 1233655 1234665 R KEGG: cpf:CPF_1904 hypothetical protein; hypothetical protein complement(1233655..1234665) Clostridium beijerinckii NCIMB 8052 5292258 YP_001308171.1 CDS Cbei_1031 NC_009617.1 1234792 1235349 D KEGG: tte:TTE1187 carbonic anhydrase/acetyltransferase, isoleucine patch superfamily; carbonic anhydrase 1234792..1235349 Clostridium beijerinckii NCIMB 8052 5292259 YP_001308172.1 CDS Cbei_1032 NC_009617.1 1235558 1236394 D SMART: RNA binding S1 domain protein; KEGG: cpe:CPE1650 hypothetical protein; RNA-binding S1 domain-containing protein 1235558..1236394 Clostridium beijerinckii NCIMB 8052 5292260 YP_001308173.1 CDS Cbei_1033 NC_009617.1 1236450 1237865 R PFAM: GerA spore germination protein; KEGG: cpe:CPE0984 stage V sporulation protein AF; GerA spore germination protein complement(1236450..1237865) Clostridium beijerinckii NCIMB 8052 5292261 YP_001308174.1 CDS Cbei_1034 NC_009617.1 1238543 1240387 D TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase; KEGG: btl:BALH_1017 asparagine synthetase, glutamine-hydrolyzing; asparagine synthase 1238543..1240387 Clostridium beijerinckii NCIMB 8052 5292262 YP_001308175.1 CDS Cbei_1035 NC_009617.1 1240528 1240830 R KEGG: cpr:CPR_0073 hypothetical protein; hypothetical protein complement(1240528..1240830) Clostridium beijerinckii NCIMB 8052 5292263 YP_001308176.1 CDS Cbei_1036 NC_009617.1 1240986 1243598 R TIGRFAM: ATPase P; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: cpf:CPF_1412 ATPase P; ATPase P complement(1240986..1243598) Clostridium beijerinckii NCIMB 8052 5292264 YP_001308177.1 CDS Cbei_1037 NC_009617.1 1243915 1244334 D PFAM: protein of unknown function DUF327; KEGG: ctc:CTC00667 hypothetical protein; hypothetical protein 1243915..1244334 Clostridium beijerinckii NCIMB 8052 5292265 YP_001308178.1 CDS Cbei_1038 NC_009617.1 1245010 1246008 D KEGG: cpe:CPE1487 sulfonate/nitrate transport system substrate-binding protein; sulfonate/nitrate transport system substrate-binding protein 1245010..1246008 Clostridium beijerinckii NCIMB 8052 5292266 YP_001308179.1 CDS Cbei_1039 NC_009617.1 1245983 1246738 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpf:CPF_1737 ABC transporter permease; binding-protein-dependent transport system inner membrane protein 1245983..1246738 Clostridium beijerinckii NCIMB 8052 5292267 YP_001308180.1 CDS Cbei_1040 NC_009617.1 1246735 1247403 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpr:CPR_1464 nitrate ABC transporter ATP binding protein; ABC transporter 1246735..1247403 Clostridium beijerinckii NCIMB 8052 5292268 YP_001308181.1 CDS Cbei_1041 NC_009617.1 1247790 1249496 D PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: cpr:CPR_2282 ABC transporter (ATP binding protein)-like protein lin0829; ABC transporter 1247790..1249496 Clostridium beijerinckii NCIMB 8052 5292269 YP_001308182.1 CDS Cbei_1042 NC_009617.1 1249548 1249979 R hypothetical protein complement(1249548..1249979) Clostridium beijerinckii NCIMB 8052 5292270 YP_001308183.1 CDS Cbei_1043 NC_009617.1 1250410 1251438 R catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase complement(1250410..1251438) Clostridium beijerinckii NCIMB 8052 5292271 YP_001308184.1 CDS Cbei_1044 NC_009617.1 1251799 1253697 R TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD+ synthase; KEGG: cno:NT01CX_0103 glutamine-dependent NAD+ synthetase; NAD+ synthetase complement(1251799..1253697) Clostridium beijerinckii NCIMB 8052 5292272 YP_001308185.1 CDS Cbei_1045 NC_009617.1 1254015 1254446 D PFAM: protein of unknown function DUF107; KEGG: cac:CAC1051 uncharacterized conserved protein (possible membrane); hypothetical protein 1254015..1254446 Clostridium beijerinckii NCIMB 8052 5292273 YP_001308186.1 CDS Cbei_1046 NC_009617.1 1254450 1255397 D PFAM: band 7 protein; KEGG: cno:NT01CX_0101 SPFH domain/band 7 family protein; hypothetical protein 1254450..1255397 Clostridium beijerinckii NCIMB 8052 5292274 YP_001308187.1 CDS Cbei_1047 NC_009617.1 1255762 1256580 D KEGG: bcz:BCZK0960 EcsC-like protein; hypothetical protein 1255762..1256580 Clostridium beijerinckii NCIMB 8052 5292275 YP_001308188.1 CDS Cbei_1048 NC_009617.1 1256690 1257205 D KEGG: ddi:DDBDRAFT_0202921 hypothetical protein; hypothetical protein 1256690..1257205 Clostridium beijerinckii NCIMB 8052 5292276 YP_001308189.1 CDS Cbei_1049 NC_009617.1 1257354 1258187 D PFAM: extracellular solute-binding protein, family 3; KEGG: cpe:CPE1324 probable amino acid ABC transporter; extracellular solute-binding protein 1257354..1258187 Clostridium beijerinckii NCIMB 8052 5292277 YP_001308190.1 CDS Cbei_1050 NC_009617.1 1258251 1258892 D TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpf:CPF_1532 amino acid ABC transporter permease, His/Glu/Gln/Arg/opine family; polar amino acid ABC transporter inner membrane subunit 1258251..1258892 Clostridium beijerinckii NCIMB 8052 5292278 YP_001308191.1 CDS Cbei_1051 NC_009617.1 1258908 1259594 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpe:CPE1326 probable amino acid ABC transporter; ABC transporter 1258908..1259594 Clostridium beijerinckii NCIMB 8052 5292279 YP_001308192.1 CDS Cbei_1052 NC_009617.1 1259861 1260028 D KEGG: cno:NT01CX_0353 hypothetical protein; hypothetical protein 1259861..1260028 Clostridium beijerinckii NCIMB 8052 5292280 YP_001308193.1 CDS Cbei_1053 NC_009617.1 1260536 1264279 D TIGRFAM: phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein; KEGG: cpf:CPF_0671 phosphoribosylformylglycinamidine synthase; phosphoribosylformylglycinamidine synthase 1260536..1264279 Clostridium beijerinckii NCIMB 8052 5292281 YP_001308194.1 CDS Cbei_1054 NC_009617.1 1264677 1265156 D TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: cpr:CPR_0670 phosphoribosylaminoimidazole carboxylase, catalytic subunit; phosphoribosylaminoimidazole carboxylase catalytic subunit 1264677..1265156 Clostridium beijerinckii NCIMB 8052 5292282 YP_001308195.1 CDS Cbei_1055 NC_009617.1 1265156 1265863 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 1265156..1265863 Clostridium beijerinckii NCIMB 8052 5292283 YP_001308196.1 CDS Cbei_1056 NC_009617.1 1266119 1267534 D Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 1266119..1267534 Clostridium beijerinckii NCIMB 8052 5292284 YP_001308197.1 CDS Cbei_1057 NC_009617.1 1267604 1268605 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1267604..1268605 Clostridium beijerinckii NCIMB 8052 5292285 YP_001308198.1 CDS Cbei_1058 NC_009617.1 1268593 1269204 D TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: cpr:CPR_0674 phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase 1268593..1269204 Clostridium beijerinckii NCIMB 8052 5292286 YP_001308199.1 CDS purH NC_009617.1 1269218 1270726 D involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1269218..1270726 Clostridium beijerinckii NCIMB 8052 5292287 YP_001308200.1 CDS Cbei_1060 NC_009617.1 1271142 1272392 D catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 1271142..1272392 Clostridium beijerinckii NCIMB 8052 5292288 YP_001308201.1 CDS Cbei_1061 NC_009617.1 1272787 1273089 D KEGG: ddi:DDBDRAFT_0218157 hypothetical protein; hypothetical protein 1272787..1273089 Clostridium beijerinckii NCIMB 8052 5292289 YP_001308202.1 CDS Cbei_1062 NC_009617.1 1273638 1274006 D PFAM: Penicillinase repressor; KEGG: tte:TTE1078 predicted transcriptional regulator; CopY family transcriptional regulator 1273638..1274006 Clostridium beijerinckii NCIMB 8052 5292290 YP_001308203.1 CDS Cbei_1063 NC_009617.1 1274011 1276320 D PFAM: peptidase M56, BlaR1; KEGG: dsy:DSY3484 hypothetical protein; peptidase M56, BlaR1 1274011..1276320 Clostridium beijerinckii NCIMB 8052 5292291 YP_001308204.1 CDS Cbei_1064 NC_009617.1 1276565 1277488 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cno:NT01CX_2328 conserved protein, tetratricopeptide repeat family protein; hypothetical protein 1276565..1277488 Clostridium beijerinckii NCIMB 8052 5292292 YP_001308205.1 CDS Cbei_1065 NC_009617.1 1278185 1278718 D KEGG: cpf:CPF_1041 hypothetical protein; hypothetical protein 1278185..1278718 Clostridium beijerinckii NCIMB 8052 5292293 YP_001308206.1 CDS Cbei_1066 NC_009617.1 1279012 1279623 R hypothetical protein complement(1279012..1279623) Clostridium beijerinckii NCIMB 8052 5292294 YP_001308207.1 CDS Cbei_1067 NC_009617.1 1280118 1280567 D PFAM: regulatory protein, MarR; KEGG: ctc:CTC00126 transcriptional regulator, marR family; MarR family transcriptional regulator 1280118..1280567 Clostridium beijerinckii NCIMB 8052 5292295 YP_001308208.1 CDS Cbei_1068 NC_009617.1 1280582 1281553 D TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: cac:CAC3578 3-oxoacyl-[acyl-carrier-protein] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 1280582..1281553 Clostridium beijerinckii NCIMB 8052 5292296 YP_001308209.1 CDS Cbei_1069 NC_009617.1 1281908 1282849 D PFAM: 2-nitropropane dioxygenase, NPD; KEGG: cac:CAC3576 dioxygenase related to 2-nitropropane dioxygenase; 2-nitropropane dioxygenase 1281908..1282849 Clostridium beijerinckii NCIMB 8052 5292297 YP_001308210.1 CDS Cbei_1070 NC_009617.1 1282842 1283786 D TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: cpf:CPF_1325 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 1282842..1283786 Clostridium beijerinckii NCIMB 8052 5292298 YP_001308211.1 CDS fabG NC_009617.1 1283985 1284725 D catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1283985..1284725 Clostridium beijerinckii NCIMB 8052 5292299 YP_001308212.1 CDS Cbei_1072 NC_009617.1 1284743 1285978 D PFAM: Beta-ketoacyl synthase-like; KEGG: cpr:CPR_1139 3-oxoacyl-[acyl-carrier-protein] synthase II; beta-ketoacyl synthase-like protein 1284743..1285978 Clostridium beijerinckii NCIMB 8052 5292300 YP_001308213.1 CDS Cbei_1073 NC_009617.1 1286343 1286858 D TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: cpf:CPF_1328 acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1286343..1286858 Clostridium beijerinckii NCIMB 8052 5292301 YP_001308214.1 CDS fabZ NC_009617.1 1286862 1287290 D in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1286862..1287290 Clostridium beijerinckii NCIMB 8052 5292302 YP_001308215.1 CDS Cbei_1075 NC_009617.1 1287305 1288657 D TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: cpe:CPE1074 acetyl-CoA carboxylase; biotin carboxylase 1287305..1288657 Clostridium beijerinckii NCIMB 8052 5292303 YP_001308216.1 CDS Cbei_1076 NC_009617.1 1288650 1289513 D TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: cpr:CPR_1143 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta 1288650..1289513 Clostridium beijerinckii NCIMB 8052 5292304 YP_001308217.1 CDS Cbei_1077 NC_009617.1 1289516 1290334 D catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 1289516..1290334 Clostridium beijerinckii NCIMB 8052 5292305 YP_001308218.1 CDS Cbei_1078 NC_009617.1 1290540 1290953 D PFAM: HutP; KEGG: ctc:CTC01329 hypothetical protein; HutP protein 1290540..1290953 Clostridium beijerinckii NCIMB 8052 5292306 YP_001308219.1 CDS Cbei_1079 NC_009617.1 1291610 1292626 D PFAM: protein of unknown function DUF534; KEGG: swo:Swol_0325 hypothetical protein; hypothetical protein 1291610..1292626 Clostridium beijerinckii NCIMB 8052 5292307 YP_001308220.1 CDS Cbei_1080 NC_009617.1 1292626 1293528 D PFAM: inner-membrane translocator; KEGG: fnu:FN2080 ABC transporter integral membrane protein; inner-membrane translocator 1292626..1293528 Clostridium beijerinckii NCIMB 8052 5292308 YP_001308221.1 CDS Cbei_1081 NC_009617.1 1293494 1294288 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: fnu:FN2079 ABC transporter ATP-binding protein; ABC transporter 1293494..1294288 Clostridium beijerinckii NCIMB 8052 5292309 YP_001308222.1 CDS Cbei_1082 NC_009617.1 1294796 1294918 D PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_1737 autolysin/N-acetylmuramoyl-L-alanine amidase; cell wall binding repeat-containing protein 1294796..1294918 Clostridium beijerinckii NCIMB 8052 5292310 YP_001308223.1 CDS Cbei_1083 NC_009617.1 1295074 1295916 D PFAM: Ig domain protein, group 2 domain protein; KEGG: cth:Cthe_0056 Ig-like, group 2; Ig domain-containing protein 1295074..1295916 Clostridium beijerinckii NCIMB 8052 5292311 YP_001308224.1 CDS Cbei_1085 NC_009617.1 1296792 1297841 D KEGG: cpe:CPE1341 probable galactoside ABC transporter; galactoside ABC transporter 1296792..1297841 Clostridium beijerinckii NCIMB 8052 5296335 YP_001308225.1 CDS Cbei_1086 NC_009617.1 1297875 1298408 R KEGG: sce:YDL035C Plasma membrane G protein coupled receptor (GPCR) that interacts with the heterotrimeric G protein alpha subunit, Gpa2p, and with Plc1p; sensor that integrates nutritional signals with the modulation of cell fate via PKA and cAMP synthesis; hypothetical protein complement(1297875..1298408) Clostridium beijerinckii NCIMB 8052 5292313 YP_001308226.1 CDS Cbei_1087 NC_009617.1 1299274 1301175 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: aba:Acid345_4523 diguanylate cyclase with GAF sensor; diguanylate cyclase 1299274..1301175 Clostridium beijerinckii NCIMB 8052 5292314 YP_001308227.1 CDS Cbei_1088 NC_009617.1 1301741 1303339 D PFAM: membrane bound O-acyl transferase, MBOAT family protein; KEGG: cno:NT01CX_1554 alginate O-acetylation protein; membrane bound O-acyl transferase, MBOAT family protein 1301741..1303339 Clostridium beijerinckii NCIMB 8052 5292315 YP_001308228.1 CDS Cbei_1089 NC_009617.1 1303371 1304672 D KEGG: fnu:FN1671 ABC transporter ATP-binding protein; hypothetical protein 1303371..1304672 Clostridium beijerinckii NCIMB 8052 5292316 YP_001308229.1 CDS Cbei_1090 NC_009617.1 1304733 1306244 D PFAM: AMP-dependent synthetase and ligase; KEGG: cff:CFF8240_1466 amino acid adenylation domain protein; AMP-dependent synthetase and ligase 1304733..1306244 Clostridium beijerinckii NCIMB 8052 5292317 YP_001308230.1 CDS Cbei_1091 NC_009617.1 1306623 1306850 D hypothetical protein 1306623..1306850 Clostridium beijerinckii NCIMB 8052 5292318 YP_001308231.1 CDS Cbei_1092 NC_009617.1 1307083 1307577 D PFAM: VanZ family protein; KEGG: cac:CAC3074 hypothetical protein; VanZ family protein 1307083..1307577 Clostridium beijerinckii NCIMB 8052 5292319 YP_001308232.1 CDS Cbei_1093 NC_009617.1 1307671 1308204 D KEGG: dsy:DSY3434 hypothetical protein; hypothetical protein 1307671..1308204 Clostridium beijerinckii NCIMB 8052 5292320 YP_001308233.1 CDS Cbei_1095 NC_009617.1 1309026 1309202 D hypothetical protein 1309026..1309202 Clostridium beijerinckii NCIMB 8052 5296336 YP_001308234.1 CDS Cbei_1096 NC_009617.1 1309845 1311089 D PFAM: ATPase AAA, central domain protein; SMART: ATPase AAA; KEGG: cpr:CPR_1757 ATPase, AAA family; recombination factor protein RarA 1309845..1311089 Clostridium beijerinckii NCIMB 8052 5292322 YP_001308235.1 CDS Cbei_1097 NC_009617.1 1311212 1311664 D TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: cpr:CPR_1756 uncharacterized conserved protein of YjeB/RRF2 family; BadM/Rrf2 family transcriptional regulator 1311212..1311664 Clostridium beijerinckii NCIMB 8052 5292323 YP_001308236.1 CDS Cbei_1098 NC_009617.1 1311667 1312848 D PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cpr:CPR_1755 cysteine desulfurase; class V aminotransferase 1311667..1312848 Clostridium beijerinckii NCIMB 8052 5292324 YP_001308237.1 CDS Cbei_1099 NC_009617.1 1312850 1313287 D PFAM: nitrogen-fixing NifU domain protein; KEGG: cpr:CPR_1754 NifU protein; NifU domain-containing protein 1312850..1313287 Clostridium beijerinckii NCIMB 8052 5292325 YP_001308238.1 CDS mnmA NC_009617.1 1313299 1314375 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 1313299..1314375 Clostridium beijerinckii NCIMB 8052 5292326 YP_001308239.1 CDS Cbei_1101 NC_009617.1 1314768 1315064 D KEGG: ddi:DDBDRAFT_0218157 hypothetical protein; hypothetical protein 1314768..1315064 Clostridium beijerinckii NCIMB 8052 5292327 YP_001308240.1 CDS Cbei_1102 NC_009617.1 1315667 1316167 D PFAM: PRC-barrel domain protein; KEGG: cpr:CPR_1752 PRC-barrel domain protein; PRC-barrel domain-containing protein 1315667..1316167 Clostridium beijerinckii NCIMB 8052 5292328 YP_001308241.1 CDS Cbei_1103 NC_009617.1 1316148 1317176 D PFAM: protein of unknown function UPF0118; KEGG: cpe:CPE1781 hypothetical protein; hypothetical protein 1316148..1317176 Clostridium beijerinckii NCIMB 8052 5292329 YP_001308242.1 CDS alaS NC_009617.1 1318143 1320782 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1318143..1320782 Clostridium beijerinckii NCIMB 8052 5292330 YP_001308243.1 CDS Cbei_1105 NC_009617.1 1320919 1321176 D PFAM: protein of unknown function DUF965; KEGG: cpr:CPR_1749 hypothetical protein; hypothetical protein 1320919..1321176 Clostridium beijerinckii NCIMB 8052 5292331 YP_001308244.1 CDS Cbei_1106 NC_009617.1 1321285 1321701 D similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 1321285..1321701 Clostridium beijerinckii NCIMB 8052 5292332 YP_001308245.1 CDS Cbei_1107 NC_009617.1 1321910 1322188 D PFAM: protein of unknown function DUF1292; KEGG: cno:NT01CX_2277 hypothetical protein; hypothetical protein 1321910..1322188 Clostridium beijerinckii NCIMB 8052 5292333 YP_001308246.1 CDS Cbei_1108 NC_009617.1 1322274 1322738 D PFAM: ferric-uptake regulator; KEGG: cpf:CPF_2029 transcriptional regulator, Fur family; ferric uptake regulator family protein 1322274..1322738 Clostridium beijerinckii NCIMB 8052 5292334 YP_001308247.1 CDS Cbei_1109 NC_009617.1 1323102 1324769 D PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: cpf:CPF_2028 RNA-metabolising metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 1323102..1324769 Clostridium beijerinckii NCIMB 8052 5292335 YP_001308248.1 CDS Cbei_1110 NC_009617.1 1325169 1326995 D TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: cpe:CPE1774 probable GTP-binding protein; GTP-binding protein TypA 1325169..1326995 Clostridium beijerinckii NCIMB 8052 5292336 YP_001308249.1 CDS Cbei_1111 NC_009617.1 1327104 1328129 D PFAM: aminodeoxychorismate lyase; KEGG: cpe:CPE1773 conserved hypothetical protein; aminodeoxychorismate lyase 1327104..1328129 Clostridium beijerinckii NCIMB 8052 5292337 YP_001308250.1 CDS Cbei_1112 NC_009617.1 1328410 1329054 D PFAM: O-methyltransferase, family 3; KEGG: cpf:CPF_2025 O-methyltransferase family protein; O-methyltransferase family protein 1328410..1329054 Clostridium beijerinckii NCIMB 8052 5292338 YP_001308251.1 CDS Cbei_1113 NC_009617.1 1329061 1330281 D PFAM: peptidase U32; KEGG: cpf:CPF_2024 peptidase, U32 family; peptidase U32 1329061..1330281 Clostridium beijerinckii NCIMB 8052 5292339 YP_001308252.1 CDS Cbei_1114 NC_009617.1 1330782 1332398 D PFAM: penicillin-binding protein, transpeptidase; KEGG: cpf:CPF_2022 penicillin-binding protein; penicillin-binding protein, transpeptidase 1330782..1332398 Clostridium beijerinckii NCIMB 8052 5292340 YP_001308253.1 CDS Cbei_1115 NC_009617.1 1332708 1333406 D sigma-28; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell after engulfment; sporulation sigma factor SigK 1332708..1333406 Clostridium beijerinckii NCIMB 8052 5292341 YP_001308254.1 CDS Cbei_1116 NC_009617.1 1333666 1334697 D TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: ATPase AAA; KEGG: ctc:CTC01119 pili retraction protein pilT; twitching motility protein 1333666..1334697 Clostridium beijerinckii NCIMB 8052 5292342 YP_001308255.1 CDS Cbei_1117 NC_009617.1 1334798 1336051 D PFAM: cell division protein FtsA; KEGG: cpf:CPF_2019 cell division protein FtsA; cell division protein FtsA 1334798..1336051 Clostridium beijerinckii NCIMB 8052 5292343 YP_001308256.1 CDS Cbei_1118 NC_009617.1 1336066 1337205 D TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ, GTPase; Tubulin/FtsZ domain protein; KEGG: cpf:CPF_2018 cell division protein FtsZ; cell division protein FtsZ 1336066..1337205 Clostridium beijerinckii NCIMB 8052 5292344 YP_001308257.1 CDS Cbei_1119 NC_009617.1 1337701 1338591 D PFAM: peptidase U4, sporulation factor SpoIIGA; KEGG: cpr:CPR_1734 sporulation factor SpoIIGA; peptidase U4, sporulation factor SpoIIGA 1337701..1338591 Clostridium beijerinckii NCIMB 8052 5292345 YP_001308258.1 CDS Cbei_1120 NC_009617.1 1338566 1339273 D sigma-29; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell at the onset of sporulation; sporulation sigma factor SigE 1338566..1339273 Clostridium beijerinckii NCIMB 8052 5292346 YP_001308259.1 CDS Cbei_1121 NC_009617.1 1339356 1340129 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed after engulfment; this factor is involved in the transcription of small acid-soluble proteins involved in protecting the forespore chromatin; sporulation sigma factor SigG 1339356..1340129 Clostridium beijerinckii NCIMB 8052 5292347 YP_001308260.1 CDS Cbei_1122 NC_009617.1 1340170 1340439 D TIGRFAM: Sporulation protein YlmC/YmxH; PFAM: PRC-barrel domain protein; KEGG: cpr:CPR_1731 PRC-barrel domain; sporulation protein YlmC/YmxH 1340170..1340439 Clostridium beijerinckii NCIMB 8052 5292348 YP_001308261.1 CDS nrdR NC_009617.1 1340510 1340959 D PFAM: ATP-cone domain protein; KEGG: cpr:CPR_1730 transcriptional regulator, NrdR family; transcriptional regulator NrdR 1340510..1340959 Clostridium beijerinckii NCIMB 8052 5292349 YP_001308262.1 CDS Cbei_1124 NC_009617.1 1341224 1341964 D PFAM: protein of unknown function DUF152; KEGG: cno:NT01CX_2256 hypothetical protein; hypothetical protein 1341224..1341964 Clostridium beijerinckii NCIMB 8052 5292350 YP_001308263.1 CDS Cbei_1125 NC_009617.1 1341980 1342681 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ctc:CTC01130 transcriptional regulatory protein; two component transcriptional regulator 1341980..1342681 Clostridium beijerinckii NCIMB 8052 5292351 YP_001308264.1 CDS Cbei_1126 NC_009617.1 1342684 1344390 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cac:CAC1701 sensory histidine kinase (with HAMP and PAS domains); multi-sensor signal transduction histidine kinase 1342684..1344390 Clostridium beijerinckii NCIMB 8052 5292352 YP_001308265.1 CDS Cbei_1127 NC_009617.1 1344593 1345501 D TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: cac:CAC1705 periplasmic phosphate-binding protein; phosphate binding protein 1344593..1345501 Clostridium beijerinckii NCIMB 8052 5292353 YP_001308266.1 CDS Cbei_1128 NC_009617.1 1345525 1346418 D TIGRFAM: phosphate ABC transporter inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CAC1706 phosphate permease; phosphate ABC transporter permease 1345525..1346418 Clostridium beijerinckii NCIMB 8052 5292354 YP_001308267.1 CDS Cbei_1129 NC_009617.1 1346418 1347302 D TIGRFAM: phosphate ABC transporter inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CAC1707 permease component of ATP-dependent phosphate uptake system; phosphate ABC transporter permease 1346418..1347302 Clostridium beijerinckii NCIMB 8052 5292355 YP_001308268.1 CDS Cbei_1130 NC_009617.1 1347312 1348061 D TIGRFAM: phosphate ABC transporter ATPase subunit; PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC1708 ATPase component of ABC-type phosphate transport system; phosphate ABC transporter ATPase 1347312..1348061 Clostridium beijerinckii NCIMB 8052 5292356 YP_001308269.1 CDS Cbei_1131 NC_009617.1 1348080 1348742 D TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: cac:CAC1709 phosphate uptake regulator; phosphate uptake regulator PhoU 1348080..1348742 Clostridium beijerinckii NCIMB 8052 5292357 YP_001308270.1 CDS Cbei_1132 NC_009617.1 1349087 1349749 D TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: cac:CAC1709 phosphate uptake regulator; phosphate uptake regulator PhoU 1349087..1349749 Clostridium beijerinckii NCIMB 8052 5292358 YP_001308271.1 CDS Cbei_1133 NC_009617.1 1349988 1351322 D PFAM: protein of unknown function DUF512; KEGG: cpf:CPF_2009 hypothetical protein; hypothetical protein 1349988..1351322 Clostridium beijerinckii NCIMB 8052 5292359 YP_001308272.1 CDS engA NC_009617.1 1351381 1352697 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1351381..1352697 Clostridium beijerinckii NCIMB 8052 5292360 YP_001308273.1 CDS gpsA NC_009617.1 1352700 1353692 D catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1352700..1353692 Clostridium beijerinckii NCIMB 8052 5292361 YP_001308274.1 CDS Cbei_1136 NC_009617.1 1354203 1355681 D TIGRFAM: Sporulation stage IV, protein A; KEGG: cpr:CPR_1724 stage IV sporulation protein A; sporulation stage IV, protein A 1354203..1355681 Clostridium beijerinckii NCIMB 8052 5292362 YP_001308275.1 CDS Cbei_1137 NC_009617.1 1356122 1356547 D hypothetical protein 1356122..1356547 Clostridium beijerinckii NCIMB 8052 5292363 YP_001308276.1 CDS Cbei_1138 NC_009617.1 1356834 1357652 R KEGG: lma:LmjF15.0440 hypothetical protein, unknown function; hypothetical protein complement(1356834..1357652) Clostridium beijerinckii NCIMB 8052 5292364 YP_001308277.1 CDS Cbei_1139 NC_009617.1 1358228 1359109 D PFAM: YicC N-terminal domain protein; domain of unknown function DUF1732; KEGG: cpf:CPF_2003 conserved hypothetical protein TIGR00255; hypothetical protein 1358228..1359109 Clostridium beijerinckii NCIMB 8052 5292365 YP_001308278.1 CDS Cbei_1140 NC_009617.1 1359124 1359396 D PFAM: protein of unknown function DUF370; KEGG: cno:NT01CX_2250 hypothetical UPF0296 protein; hypothetical protein 1359124..1359396 Clostridium beijerinckii NCIMB 8052 5292366 YP_001308279.1 CDS gmk NC_009617.1 1359396 1360034 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 1359396..1360034 Clostridium beijerinckii NCIMB 8052 5292367 YP_001308280.1 CDS rpoZ NC_009617.1 1360015 1360233 D Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 1360015..1360233 Clostridium beijerinckii NCIMB 8052 5292368 YP_001308281.1 CDS Cbei_1143 NC_009617.1 1360235 1361419 D catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 1360235..1361419 Clostridium beijerinckii NCIMB 8052 5292369 YP_001308282.1 CDS Cbei_1144 NC_009617.1 1361600 1363798 D binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 1361600..1363798 Clostridium beijerinckii NCIMB 8052 5292370 YP_001308283.1 CDS def NC_009617.1 1363811 1364269 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1363811..1364269 Clostridium beijerinckii NCIMB 8052 5292371 YP_001308284.1 CDS fmt NC_009617.1 1364292 1365218 D modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 1364292..1365218 Clostridium beijerinckii NCIMB 8052 5292372 YP_001308285.1 CDS Cbei_1147 NC_009617.1 1365234 1365926 D PFAM: peptidase, membrane zinc metallopeptidase, KEGG: cno:NT01CX_2243 hypothetical protein; peptidase, membrane zinc metallopeptidase 1365234..1365926 Clostridium beijerinckii NCIMB 8052 5292373 YP_001308286.1 CDS Cbei_1148 NC_009617.1 1365941 1367260 D TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: cpr:CPR_1712 sun protein; sun protein 1365941..1367260 Clostridium beijerinckii NCIMB 8052 5292374 YP_001308287.1 CDS Cbei_1149 NC_009617.1 1367272 1368333 D 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 1367272..1368333 Clostridium beijerinckii NCIMB 8052 5292375 YP_001308288.1 CDS Cbei_1150 NC_009617.1 1368317 1369036 D PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: cpf:CPF_1992 protein phosphatase 2C family protein; protein phosphatase 2C-like protein 1368317..1369036 Clostridium beijerinckii NCIMB 8052 5292376 YP_001308289.1 CDS Cbei_1151 NC_009617.1 1369038 1370984 D PFAM: protein kinase; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; KEGG: cpe:CPE1738 pobable serine/threonine protein kinase; protein kinase 1369038..1370984 Clostridium beijerinckii NCIMB 8052 5292377 YP_001308290.1 CDS Cbei_1152 NC_009617.1 1371352 1372224 D EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 1371352..1372224 Clostridium beijerinckii NCIMB 8052 5292378 YP_001308291.1 CDS Cbei_1153 NC_009617.1 1372218 1372862 D catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 1372218..1372862 Clostridium beijerinckii NCIMB 8052 5292379 YP_001308292.1 CDS Cbei_1154 NC_009617.1 1372867 1373502 D TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase, catalytic region; KEGG: cac:CAC1731 predicted nucleotide-binding protein, YLOS B.subtilis ortholog; thiamine pyrophosphokinase 1372867..1373502 Clostridium beijerinckii NCIMB 8052 5292380 YP_001308293.1 CDS rpmB NC_009617.1 1373993 1374184 R required for 70S ribosome assembly; 50S ribosomal protein L28 complement(1373993..1374184) Clostridium beijerinckii NCIMB 8052 5292381 YP_001308294.1 CDS Cbei_1156 NC_009617.1 1375261 1375611 D PFAM: protein of unknown function DUF322; KEGG: cpr:CPR_1704 hypothetical protein; hypothetical protein 1375261..1375611 Clostridium beijerinckii NCIMB 8052 5292382 YP_001308295.1 CDS Cbei_1157 NC_009617.1 1375625 1377265 D PFAM: Dak phosphatase; KEGG: cpe:CPE1732 conserved hypothetical protein; Dak phosphatase 1375625..1377265 Clostridium beijerinckii NCIMB 8052 5292383 YP_001308296.1 CDS Cbei_1158 NC_009617.1 1377326 1379359 D catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1377326..1379359 Clostridium beijerinckii NCIMB 8052 5292384 YP_001308297.1 CDS Cbei_1159 NC_009617.1 1379664 1380221 D TIGRFAM: methyltransferase; PFAM: conserved hypothetical protein 95; KEGG: cpf:CPF_1983 methyltransferase; methyltransferase 1379664..1380221 Clostridium beijerinckii NCIMB 8052 5292385 YP_001308298.1 CDS Cbei_1160 NC_009617.1 1380225 1380704 D TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain; PFAM: cytidylyltransferase; KEGG: cno:NT01CX_2230 pantetheine-phosphate adenylyltransferase; pantetheine-phosphate adenylyltransferase 1380225..1380704 Clostridium beijerinckii NCIMB 8052 5292386 YP_001308299.1 CDS Cbei_1161 NC_009617.1 1380879 1381421 D KEGG: cpf:CPF_1980 hypothetical protein; hypothetical protein 1380879..1381421 Clostridium beijerinckii NCIMB 8052 5292387 YP_001308300.1 CDS Cbei_1162 NC_009617.1 1381401 1382582 R TIGRFAM: Sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein; KEGG: cpr:CPR_1699 uncharacterized membrane protein; sporulation integral membrane protein YlbJ complement(1381401..1382582) Clostridium beijerinckii NCIMB 8052 5292388 YP_001308301.1 CDS Cbei_1163 NC_009617.1 1382635 1383840 R PFAM: protein of unknown function DUF795; KEGG: cno:NT01CX_2226 hypothetical protein; hypothetical protein complement(1382635..1383840) Clostridium beijerinckii NCIMB 8052 5292389 YP_001308302.1 CDS eutD NC_009617.1 1384403 1385404 D in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; phosphotransacetylase 1384403..1385404 Clostridium beijerinckii NCIMB 8052 5292390 YP_001308303.1 CDS Cbei_1165 NC_009617.1 1385501 1386703 D AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 1385501..1386703 Clostridium beijerinckii NCIMB 8052 5292391 YP_001308304.1 CDS Cbei_1166 NC_009617.1 1387051 1387557 D PFAM: protein of unknown function DUF177; KEGG: cpf:CPF_1976 hypothetical protein; hypothetical protein 1387051..1387557 Clostridium beijerinckii NCIMB 8052 5292392 YP_001308305.1 CDS rpmF NC_009617.1 1387561 1387743 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1387561..1387743 Clostridium beijerinckii NCIMB 8052 5292393 YP_001308306.1 CDS Cbei_1168 NC_009617.1 1387990 1388991 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1387990..1388991 Clostridium beijerinckii NCIMB 8052 5292394 YP_001308307.1 CDS acpP NC_009617.1 1389072 1389302 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1389072..1389302 Clostridium beijerinckii NCIMB 8052 5292395 YP_001308308.1 CDS rnc NC_009617.1 1389577 1390275 D cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1389577..1390275 Clostridium beijerinckii NCIMB 8052 5292396 YP_001308309.1 CDS Cbei_1171 NC_009617.1 1390268 1391299 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cpr:CPR_1689 radical SAM domain protein; radical SAM domain-containing protein 1390268..1391299 Clostridium beijerinckii NCIMB 8052 5292397 YP_001308310.1 CDS Cbei_1172 NC_009617.1 1391601 1395158 D TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: cno:NT01CX_2216 chromosome segregation protein SMC; chromosome segregation protein SMC 1391601..1395158 Clostridium beijerinckii NCIMB 8052 5292398 YP_001308311.1 CDS Cbei_1173 NC_009617.1 1395297 1396205 D TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G- domain; GTP-binding signal recognition particle SRP54, helical bundle; SMART: ATPase AAA; KEGG: cpe:CPE1715 signal recognition particle protein; signal recognition particle-docking protein FtsY 1395297..1396205 Clostridium beijerinckii NCIMB 8052 5292399 YP_001308312.1 CDS Cbei_1174 NC_009617.1 1396614 1396943 D PFAM: helix-turn-helix protein, YlxM/p13 family protein; KEGG: cpf:CPF_1968 DNA-binding protein; DNA-binding protein 1396614..1396943 Clostridium beijerinckii NCIMB 8052 5292400 YP_001308313.1 CDS Cbei_1175 NC_009617.1 1396956 1398308 D TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54, G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54, helical bundle; SMART: ATPase AAA; KEGG: cpr:CPR_1685 signal recognition particle protein; signal recognition particle protein 1396956..1398308 Clostridium beijerinckii NCIMB 8052 5292401 YP_001308314.1 CDS rpsP NC_009617.1 1398361 1398606 D binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 1398361..1398606 Clostridium beijerinckii NCIMB 8052 5292402 YP_001308315.1 CDS Cbei_1177 NC_009617.1 1398655 1398882 D KEGG: cac:CAC1756 predicted nucleic acid binding protein, containing KH domain; hypothetical protein 1398655..1398882 Clostridium beijerinckii NCIMB 8052 5292403 YP_001308316.1 CDS rimM NC_009617.1 1399284 1399781 D Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 1399284..1399781 Clostridium beijerinckii NCIMB 8052 5292404 YP_001308317.1 CDS trmD NC_009617.1 1399771 1400490 D methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 1399771..1400490 Clostridium beijerinckii NCIMB 8052 5292405 YP_001308318.1 CDS rplS NC_009617.1 1400607 1400957 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1400607..1400957 Clostridium beijerinckii NCIMB 8052 5292406 YP_001308319.1 CDS rbgA NC_009617.1 1401175 1402038 D essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase 1401175..1402038 Clostridium beijerinckii NCIMB 8052 5292407 YP_001308320.1 CDS rnhB NC_009617.1 1402025 1402837 D RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 1402025..1402837 Clostridium beijerinckii NCIMB 8052 5292408 YP_001308321.1 CDS Cbei_1183 NC_009617.1 1403028 1403399 R PFAM: protein of unknown function UPF0102; KEGG: cpe:CPE1705 predicted endonuclease; hypothetical protein complement(1403028..1403399) Clostridium beijerinckii NCIMB 8052 5292409 YP_001308322.1 CDS Cbei_1184 NC_009617.1 1403561 1405081 D TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; KEGG: cpf:CPF_1958 Mg chelatase-like protein; Mg chelatase subunit ChlI 1403561..1405081 Clostridium beijerinckii NCIMB 8052 5292410 YP_001308323.1 CDS Cbei_1185 NC_009617.1 1405104 1406159 D TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: cno:NT01CX_2152 DNA uptake protein; DNA protecting protein DprA 1405104..1406159 Clostridium beijerinckii NCIMB 8052 5292411 YP_001308324.1 CDS Cbei_1186 NC_009617.1 1406206 1408299 D catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1406206..1408299 Clostridium beijerinckii NCIMB 8052 5292412 YP_001308325.1 CDS Cbei_1187 NC_009617.1 1408508 1409284 D CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; transcriptional repressor CodY 1408508..1409284 Clostridium beijerinckii NCIMB 8052 5292413 YP_001308326.1 CDS rpsB NC_009617.1 1409826 1410527 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1409826..1410527 Clostridium beijerinckii NCIMB 8052 5292414 YP_001308327.1 CDS tsf NC_009617.1 1410623 1411540 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1410623..1411540 Clostridium beijerinckii NCIMB 8052 5292415 YP_001308328.1 CDS pyrH NC_009617.1 1411649 1412371 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1411649..1412371 Clostridium beijerinckii NCIMB 8052 5292416 YP_001308329.1 CDS frr NC_009617.1 1412603 1413160 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1412603..1413160 Clostridium beijerinckii NCIMB 8052 5292417 YP_001308330.1 CDS Cbei_1192 NC_009617.1 1413573 1414331 D TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; KEGG: ctc:CTC01265 undecaprenyl pyrophosphate synthetase; undecaprenyl diphosphate synthase 1413573..1414331 Clostridium beijerinckii NCIMB 8052 5292418 YP_001308331.1 CDS Cbei_1193 NC_009617.1 1414347 1415141 D PFAM: phosphatidate cytidylyltransferase; KEGG: cpr:CPR_1667 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 1414347..1415141 Clostridium beijerinckii NCIMB 8052 5292419 YP_001308332.1 CDS Cbei_1194 NC_009617.1 1415281 1416249 D PFAM: protein of unknown function UPF0118; KEGG: cac:CAC1794 predicted permease; hypothetical protein 1415281..1416249 Clostridium beijerinckii NCIMB 8052 5292420 YP_001308333.1 CDS Cbei_1195 NC_009617.1 1416374 1417537 D catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1416374..1417537 Clostridium beijerinckii NCIMB 8052 5292421 YP_001308334.1 CDS Cbei_1196 NC_009617.1 1417555 1418565 D TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; KEGG: cpe:CPE1693 hypothetical zinc metalloprotease; membrane-associated zinc metalloprotease 1417555..1418565 Clostridium beijerinckii NCIMB 8052 5292422 YP_001308335.1 CDS ispG NC_009617.1 1418910 1419989 D catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1418910..1419989 Clostridium beijerinckii NCIMB 8052 5292423 YP_001308336.1 CDS Cbei_1198 NC_009617.1 1420445 1420903 D in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 1420445..1420903 Clostridium beijerinckii NCIMB 8052 5292424 YP_001308337.1 CDS nusA NC_009617.1 1420920 1422116 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1420920..1422116 Clostridium beijerinckii NCIMB 8052 5292425 YP_001308338.1 CDS Cbei_1200 NC_009617.1 1422130 1422396 D PFAM: protein of unknown function DUF448; KEGG: cpr:CPR_1660 hypothetical protein; hypothetical protein 1422130..1422396 Clostridium beijerinckii NCIMB 8052 5292426 YP_001308339.1 CDS Cbei_1201 NC_009617.1 1422389 1422700 D PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: cpr:CPR_1659 ribosomal protein L7Ae superfamily; 50S ribosomal protein L7Ae family protein 1422389..1422700 Clostridium beijerinckii NCIMB 8052 5292427 YP_001308340.1 CDS infB NC_009617.1 1422727 1424814 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1422727..1424814 Clostridium beijerinckii NCIMB 8052 5292428 YP_001308341.1 CDS rbfA NC_009617.1 1424832 1425188 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 1424832..1425188 Clostridium beijerinckii NCIMB 8052 5292429 YP_001308342.1 CDS Cbei_1204 NC_009617.1 1425181 1426161 D PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: cpr:CPR_1656 DHH subfamily 1 protein; phosphoesterase domain-containing protein 1425181..1426161 Clostridium beijerinckii NCIMB 8052 5292430 YP_001308343.1 CDS truB NC_009617.1 1426232 1427131 D catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1426232..1427131 Clostridium beijerinckii NCIMB 8052 5292431 YP_001308344.1 CDS Cbei_1206 NC_009617.1 1427189 1428124 D catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 1427189..1428124 Clostridium beijerinckii NCIMB 8052 5292432 YP_001308345.1 CDS rpsO NC_009617.1 1428244 1428507 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 1428244..1428507 Clostridium beijerinckii NCIMB 8052 5292433 YP_001308346.1 CDS Cbei_1208 NC_009617.1 1428614 1430719 D PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein; KEGG: cpe:CPE1680 polyribonucleotide nucleotidyltransferase; polynucleotide phosphorylase/polyadenylase 1428614..1430719 Clostridium beijerinckii NCIMB 8052 5292434 YP_001308347.1 CDS Cbei_1209 NC_009617.1 1430769 1432076 D PFAM: peptidase M16 domain protein; KEGG: ctc:CTC01281 zinc protease; peptidase M16 domain-containing protein 1430769..1432076 Clostridium beijerinckii NCIMB 8052 5292435 YP_001308348.1 CDS Cbei_1210 NC_009617.1 1432144 1432425 D TIGRFAM: Sporulation protein YlmC/YmxH; PFAM: PRC-barrel domain protein; KEGG: cpr:CPR_1651 PRC-barrel domain protein; sporulation protein YlmC/YmxH 1432144..1432425 Clostridium beijerinckii NCIMB 8052 5292436 YP_001308349.1 CDS Cbei_1211 NC_009617.1 1432442 1433638 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; diaminopimelate sensitive; aspartate kinase I 1432442..1433638 Clostridium beijerinckii NCIMB 8052 5292437 YP_001308350.1 CDS Cbei_1212 NC_009617.1 1433907 1434614 D PFAM: peptidase S14, ClpP; KEGG: cpf:CPF_1931 clp protease; peptidase S14, ClpP 1433907..1434614 Clostridium beijerinckii NCIMB 8052 5292438 YP_001308351.1 CDS Cbei_1213 NC_009617.1 1434729 1437098 D PFAM: cell divisionFtsK/SpoIIIE; KEGG: cpf:CPF_1930 DNA translocase FtsK; cell division protein FtsK 1434729..1437098 Clostridium beijerinckii NCIMB 8052 5292439 YP_001308352.1 CDS Cbei_1214 NC_009617.1 1437313 1438710 D KEGG: cpe:CPE1675 hypothetical protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein YliG 1437313..1438710 Clostridium beijerinckii NCIMB 8052 5292440 YP_001308353.1 CDS Cbei_1215 NC_009617.1 1438694 1439284 D TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cpf:CPF_1928 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1438694..1439284 Clostridium beijerinckii NCIMB 8052 5292441 YP_001308354.1 CDS recA NC_009617.1 1439456 1440541 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1439456..1440541 Clostridium beijerinckii NCIMB 8052 5292442 YP_001308355.1 CDS Cbei_1217 NC_009617.1 1440836 1442377 D protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 1440836..1442377 Clostridium beijerinckii NCIMB 8052 5292443 YP_001308356.1 CDS Cbei_1218 NC_009617.1 1442598 1442858 D PFAM: Stage V sporulation protein S; KEGG: cpr:CPR_1643 stage V sporulation protein S; stage V sporulation protein S 1442598..1442858 Clostridium beijerinckii NCIMB 8052 5292444 YP_001308357.1 CDS Cbei_1219 NC_009617.1 1442981 1443241 D TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: cpr:CPR_1641 phosphocarrier protein (HPr); PTS system phosphocarrier protein HPr 1442981..1443241 Clostridium beijerinckii NCIMB 8052 5292445 YP_001308358.1 CDS Cbei_1220 NC_009617.1 1443369 1443587 R KEGG: cth:Cthe_2074 protein of unknown function DUF378; hypothetical protein complement(1443369..1443587) Clostridium beijerinckii NCIMB 8052 5292446 YP_001308359.1 CDS Cbei_1221 NC_009617.1 1443789 1445219 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1443789..1445219 Clostridium beijerinckii NCIMB 8052 5292447 YP_001308360.1 CDS Cbei_1222 NC_009617.1 1445669 1446664 R KEGG: ctc:CTC01474 hypothetical protein; hypothetical protein complement(1445669..1446664) Clostridium beijerinckii NCIMB 8052 5292448 YP_001308361.1 CDS Cbei_1223 NC_009617.1 1447124 1448374 D KEGG: dsy:DSY2753 hypothetical protein; hypothetical protein 1447124..1448374 Clostridium beijerinckii NCIMB 8052 5292449 YP_001308362.1 CDS Cbei_1224 NC_009617.1 1448876 1449961 D TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: cno:NT01CX_0715 riboflavin biosynthesis protein RibD; riboflavin biosynthesis protein RibD 1448876..1449961 Clostridium beijerinckii NCIMB 8052 5292450 YP_001308363.1 CDS Cbei_1225 NC_009617.1 1449988 1450638 D catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 1449988..1450638 Clostridium beijerinckii NCIMB 8052 5292451 YP_001308364.1 CDS Cbei_1226 NC_009617.1 1450703 1451896 D PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: cpr:CPR_0532 riboflavin biosynthesis protein RibA; GTP cyclohydrolase II 1450703..1451896 Clostridium beijerinckii NCIMB 8052 5292452 YP_001308365.1 CDS ribH NC_009617.1 1452064 1452528 D RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 1452064..1452528 Clostridium beijerinckii NCIMB 8052 5292453 YP_001308366.1 CDS Cbei_1228 NC_009617.1 1453603 1454652 D PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: gka:GK2147 transcriptional regulator; LacI family transcriptional regulator 1453603..1454652 Clostridium beijerinckii NCIMB 8052 5292454 YP_001308367.1 CDS Cbei_1229 NC_009617.1 1455134 1456447 D PFAM: extracellular solute-binding protein, family 1; KEGG: bha:BH2726 lactose transport system substrate-binding protein; extracellular solute-binding protein 1455134..1456447 Clostridium beijerinckii NCIMB 8052 5292455 YP_001308368.1 CDS Cbei_1230 NC_009617.1 1456561 1457457 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH2725 lactose transport system permease; binding-protein-dependent transport system inner membrane protein 1456561..1457457 Clostridium beijerinckii NCIMB 8052 5292456 YP_001308369.1 CDS Cbei_1231 NC_009617.1 1457447 1458280 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH2724 lactose transport system permease; binding-protein-dependent transport system inner membrane protein 1457447..1458280 Clostridium beijerinckii NCIMB 8052 5292457 YP_001308370.1 CDS Cbei_1232 NC_009617.1 1458390 1460483 D PFAM: Glycoside hydrolase, family 42, N-terminal domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase C-terminal domain protein; KEGG: bcl:ABC3516 beta-galactosidase; beta-galactosidase 1458390..1460483 Clostridium beijerinckii NCIMB 8052 5292458 YP_001308371.1 CDS Cbei_1233 NC_009617.1 1460811 1461743 D TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; Ketopantoate reductase ApbA/PanE, C-terminal domain protein; KEGG: gfo:orf2995 ketopantoate reductase PanE/ApbA; 2-dehydropantoate 2-reductase 1460811..1461743 Clostridium beijerinckii NCIMB 8052 5292459 YP_001308372.1 CDS Cbei_1234 NC_009617.1 1462166 1463956 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase internal region; KEGG: bha:BH2727 two-component sensor histidine kinase; histidine kinase internal region complement(1462166..1463956) Clostridium beijerinckii NCIMB 8052 5292460 YP_001308373.1 CDS Cbei_1235 NC_009617.1 1463987 1465540 R PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: bha:BH2728 two-component response regulator; response regulator receiver protein complement(1463987..1465540) Clostridium beijerinckii NCIMB 8052 5292461 YP_001308374.1 CDS Cbei_1236 NC_009617.1 1465940 1468966 D PFAM: glycoside hydrolase, family 42, domain 5, loop region; glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; KEGG: lsl:LSL_0376 beta-galactosidase; glycoside hydrolase 1465940..1468966 Clostridium beijerinckii NCIMB 8052 5292462 YP_001308375.1 CDS Cbei_1237 NC_009617.1 1469499 1469978 R catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase complement(1469499..1469978) Clostridium beijerinckii NCIMB 8052 5292463 YP_001308376.1 CDS Cbei_1238 NC_009617.1 1470309 1470896 D PFAM: protein of unknown function DUF479; KEGG: gfo:orf2038 protein containing DUF479; hypothetical protein 1470309..1470896 Clostridium beijerinckii NCIMB 8052 5292464 YP_001308377.1 CDS Cbei_1239 NC_009617.1 1471229 1473151 D TIGRFAM: oligopeptide transporters, OPT superfamily; oligopeptide transporter OPT family; PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: cpr:CPR_1276 oligopeptide transporter OPT family; OPT family oligopeptide transporter 1471229..1473151 Clostridium beijerinckii NCIMB 8052 5292465 YP_001308378.1 CDS Cbei_1240 NC_009617.1 1473138 1473494 D KEGG: cpe:CPE1277 hypothetical protein; hypothetical protein 1473138..1473494 Clostridium beijerinckii NCIMB 8052 5292466 YP_001308379.1 CDS Cbei_1241 NC_009617.1 1473902 1475194 D KEGG: dsy:DSY3881 hypothetical protein; hypothetical protein 1473902..1475194 Clostridium beijerinckii NCIMB 8052 5292467 YP_001308380.1 CDS Cbei_1242 NC_009617.1 1475633 1476964 D PFAM: NLP/P60 protein; KEGG: cpf:CPF_0274 SagA protein; NLP/P60 protein 1475633..1476964 Clostridium beijerinckii NCIMB 8052 5292468 YP_001308381.1 CDS Cbei_1243 NC_009617.1 1477331 1477699 D KEGG: cpf:CPF_0039 hypothetical protein; hypothetical protein 1477331..1477699 Clostridium beijerinckii NCIMB 8052 5292469 YP_001308382.1 CDS Cbei_1244 NC_009617.1 1477779 1479788 R PFAM: K+ potassium transporter; KEGG: cpf:CPF_1235 potassium transporter; K+ potassium transporter complement(1477779..1479788) Clostridium beijerinckii NCIMB 8052 5292470 YP_001308383.1 CDS Cbei_1245 NC_009617.1 1480502 1480657 D KEGG: cpf:CPF_1225 hypothetical protein; hypothetical protein 1480502..1480657 Clostridium beijerinckii NCIMB 8052 5292471 YP_001308384.1 CDS Cbei_1246 NC_009617.1 1480679 1482085 D PFAM: AMMECR1 domain protein; Extradiol ring-cleavage dioxygenase, class III protein, subunit B; KEGG: cac:CAC1420 protein with a fusion of two uncharacterized domains, typical for archaea; hypothetical protein 1480679..1482085 Clostridium beijerinckii NCIMB 8052 5292472 YP_001308385.1 CDS Cbei_1248 NC_009617.1 1483245 1483946 R KEGG: mja:MJ1433 hypothetical protein; hypothetical protein complement(1483245..1483946) Clostridium beijerinckii NCIMB 8052 5296337 YP_001308386.1 CDS Cbei_1249 NC_009617.1 1484149 1484589 D TIGRFAM: thioesterase domain, KEGG: ana:all7182 hypothetical protein; thioesterase domain-containing protein 1484149..1484589 Clostridium beijerinckii NCIMB 8052 5292474 YP_001308387.1 CDS Cbei_1250 NC_009617.1 1484644 1485051 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ctc:CTC02185 glyoxalase I; glyoxalase/bleomycin resistance protein/dioxygenase 1484644..1485051 Clostridium beijerinckii NCIMB 8052 5292475 YP_001308388.1 CDS Cbei_1251 NC_009617.1 1485144 1485539 D hypothetical protein 1485144..1485539 Clostridium beijerinckii NCIMB 8052 5292476 YP_001308389.1 CDS Cbei_1252 NC_009617.1 1485773 1486144 D PFAM: protein of unknown function DUF326; KEGG: bca:BCE_A0193 hypothetical protein; hypothetical protein 1485773..1486144 Clostridium beijerinckii NCIMB 8052 5292477 YP_001308390.1 CDS Cbei_1253 NC_009617.1 1486421 1486984 D PFAM: regulatory protein, TetR; KEGG: cac:CAC0457 transcriptional regulator, AcrR family; TetR family transcriptional regulator 1486421..1486984 Clostridium beijerinckii NCIMB 8052 5292478 YP_001308391.1 CDS Cbei_1254 NC_009617.1 1487110 1489497 D KEGG: cac:CAC0456 ATP-dependent protease (lonA); TIGRFAM: ATP-dependent protease La; PFAM: ATPase AAA, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: peptidase S16, lon domain protein; ATPase AAA; ATP-dependent protease La 1487110..1489497 Clostridium beijerinckii NCIMB 8052 5292479 YP_001308392.1 CDS Cbei_1255 NC_009617.1 1489669 1490604 R KEGG: bld:BLi01973 YjlA; hypothetical protein complement(1489669..1490604) Clostridium beijerinckii NCIMB 8052 5292480 YP_001308393.1 CDS Cbei_1256 NC_009617.1 1490754 1491308 D PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; KEGG: cno:NT01CX_0005 DNA-binding protein; helix-turn-helix domain-containing protein 1490754..1491308 Clostridium beijerinckii NCIMB 8052 5292481 YP_001308394.1 CDS Cbei_1257 NC_009617.1 1491495 1492217 D TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: cpr:CPR_1234 precorrin-3B C17-methyltransferase; precorrin-3B C(17)-methyltransferase 1491495..1492217 Clostridium beijerinckii NCIMB 8052 5292482 YP_001308395.1 CDS Cbei_1258 NC_009617.1 1492347 1493120 D CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase 1492347..1493120 Clostridium beijerinckii NCIMB 8052 5292483 YP_001308396.1 CDS Cbei_1260 NC_009617.1 1493894 1494073 D KEGG: cph:Cpha266_1405 hypothetical protein; hypothetical protein 1493894..1494073 Clostridium beijerinckii NCIMB 8052 5296338 YP_001308397.1 CDS Cbei_1261 NC_009617.1 1494610 1495569 D PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; KEGG: ctc:CTC00438 conserved phage protein; mannosyl-glycoprotein endo-beta-N-acetylglucosamidase 1494610..1495569 Clostridium beijerinckii NCIMB 8052 5292485 YP_001308398.1 CDS cobT NC_009617.1 1495644 1496735 D catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1495644..1496735 Clostridium beijerinckii NCIMB 8052 5292486 YP_001308399.1 CDS Cbei_1263 NC_009617.1 1497158 1497688 D PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; KEGG: cth:Cthe_0965 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 1497158..1497688 Clostridium beijerinckii NCIMB 8052 5292487 YP_001308400.1 CDS Cbei_1264 NC_009617.1 1497727 1498266 D KEGG: cpr:CPR_1109 hypothetical protein; hypothetical protein 1497727..1498266 Clostridium beijerinckii NCIMB 8052 5292488 YP_001308401.1 CDS Cbei_1265 NC_009617.1 1498263 1499021 D PFAM: cobalamin-5-phosphate synthase CobS; KEGG: cpr:CPR_1110 cobalamin 5'-phosphate synthase; cobalamin-5-phosphate synthase CobS 1498263..1499021 Clostridium beijerinckii NCIMB 8052 5292489 YP_001308402.1 CDS Cbei_1266 NC_009617.1 1499039 1499425 D KEGG: cpr:CPR_1111 cobalamin biosynthesis protein CobU, , truncation; cobalamin biosynthesis protein CobU 1499039..1499425 Clostridium beijerinckii NCIMB 8052 5292490 YP_001308403.1 CDS Cbei_1267 NC_009617.1 1499480 1500088 D PFAM: Phosphoglycerate mutase; KEGG: cpf:CPF_1293 phosphoglycerate mutase family protein; phosphoglycerate mutase 1499480..1500088 Clostridium beijerinckii NCIMB 8052 5292491 YP_001308404.1 CDS cobD NC_009617.1 1500145 1501092 D CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 1500145..1501092 Clostridium beijerinckii NCIMB 8052 5292492 YP_001308405.1 CDS Cbei_1269 NC_009617.1 1501282 1502367 D cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase; threonine-phosphate decarboxylase 1501282..1502367 Clostridium beijerinckii NCIMB 8052 5292493 YP_001308406.1 CDS Cbei_1270 NC_009617.1 1502444 1503181 D PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_2017 choline binding protein A; cell wall binding repeat-containing protein 1502444..1503181 Clostridium beijerinckii NCIMB 8052 5292494 YP_001308407.1 CDS Cbei_1271 NC_009617.1 1503202 1503864 D TIGRFAM: ATP binding protein; PFAM: protein of unknown function DUF71, ATP-binding region; KEGG: cpr:CPR_1118 hypothetical protein; ATP-binding protein 1503202..1503864 Clostridium beijerinckii NCIMB 8052 5292495 YP_001308408.1 CDS Cbei_1272 NC_009617.1 1503972 1505471 D catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 1503972..1505471 Clostridium beijerinckii NCIMB 8052 5292496 YP_001308409.1 CDS Cbei_1273 NC_009617.1 1505488 1506003 D hypothetical protein 1505488..1506003 Clostridium beijerinckii NCIMB 8052 5292497 YP_001308410.1 CDS Cbei_1274 NC_009617.1 1506199 1506825 R TIGRFAM: Sporulation protein YtaF; KEGG: cno:NT01CX_0960 hypothetical protein; sporulation protein YtaF complement(1506199..1506825) Clostridium beijerinckii NCIMB 8052 5292498 YP_001308411.1 CDS Cbei_1275 NC_009617.1 1507136 1507948 D TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: cpf:CPF_0594 HAD-superfamily hydrolase, subfamily IIB; cof family hydrolase 1507136..1507948 Clostridium beijerinckii NCIMB 8052 5292499 YP_001308412.1 CDS Cbei_1276 NC_009617.1 1508408 1509514 D PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cac:CAC0277 HD-GYP hydrolase domain containing protein; metal dependent phosphohydrolase 1508408..1509514 Clostridium beijerinckii NCIMB 8052 5292500 YP_001308413.1 CDS Cbei_1277 NC_009617.1 1509560 1511329 R TIGRFAM: adenine deaminase; PFAM: amidohydrolase; KEGG: gka:GK2098 adenine deaminase; adenine deaminase complement(1509560..1511329) Clostridium beijerinckii NCIMB 8052 5292501 YP_001308414.1 CDS Cbei_1278 NC_009617.1 1511587 1512645 R KEGG: btl:BALH_3045 hypothetical protein; hypothetical protein complement(1511587..1512645) Clostridium beijerinckii NCIMB 8052 5292502 YP_001308415.1 CDS Cbei_1279 NC_009617.1 1513235 1514149 D catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 1513235..1514149 Clostridium beijerinckii NCIMB 8052 5292503 YP_001308416.1 CDS Cbei_1280 NC_009617.1 1514235 1514843 D KEGG: ctc:CTC01237 sodium-glucose/galactose cotransporter; sodium-glucose/galactose cotransporter 1514235..1514843 Clostridium beijerinckii NCIMB 8052 5292504 YP_001308417.1 CDS Cbei_1281 NC_009617.1 1514882 1515157 R PFAM: protein of unknown function DUF1294; KEGG: cpr:CPR_0517 hypothetical protein; hypothetical protein complement(1514882..1515157) Clostridium beijerinckii NCIMB 8052 5292505 YP_001308418.1 CDS Cbei_1282 NC_009617.1 1515294 1515935 R PFAM: Di-trans-poly-cis-decaprenylcistransferase; KEGG: cpe:CPE1558 probable di-trans, poly-cis-decaprenylcistransferase; di-trans-poly-cis-decaprenylcistransferase complement(1515294..1515935) Clostridium beijerinckii NCIMB 8052 5292506 YP_001308419.1 CDS hemA NC_009617.1 1517021 1518226 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 1517021..1518226 Clostridium beijerinckii NCIMB 8052 5292507 YP_001308420.1 CDS Cbei_1284 NC_009617.1 1518184 1518864 D catalyzes the formation of siroheme from precorrin-2; precorrin-2 dehydrogenase 1518184..1518864 Clostridium beijerinckii NCIMB 8052 5292508 YP_001308421.1 CDS hemC NC_009617.1 1518908 1519783 D transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 1518908..1519783 Clostridium beijerinckii NCIMB 8052 5292509 YP_001308422.1 CDS Cbei_1286 NC_009617.1 1519796 1521259 D TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: cpr:CPR_1421 uroporphyrinogen-III methyltransferase/synthase; uroporphyrin-III C-methyltransferase 1519796..1521259 Clostridium beijerinckii NCIMB 8052 5292510 YP_001308423.1 CDS Cbei_1287 NC_009617.1 1521358 1522323 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1521358..1522323 Clostridium beijerinckii NCIMB 8052 5292511 YP_001308424.1 CDS Cbei_1288 NC_009617.1 1522561 1523856 D Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 1522561..1523856 Clostridium beijerinckii NCIMB 8052 5292512 YP_001308425.1 CDS Cbei_1289 NC_009617.1 1523899 1524540 D PFAM: protein of unknown function DUF208; KEGG: cac:CAC1577 ncharacterized conserved protein; hypothetical protein 1523899..1524540 Clostridium beijerinckii NCIMB 8052 5292513 YP_001308426.1 CDS Cbei_1290 NC_009617.1 1524624 1525181 D KEGG: cpr:CPR_2293 hypothetical protein; hypothetical protein 1524624..1525181 Clostridium beijerinckii NCIMB 8052 5292514 YP_001308427.1 CDS Cbei_1291 NC_009617.1 1525588 1526574 R KEGG: ctc:CTC01505 lipase; lipase complement(1525588..1526574) Clostridium beijerinckii NCIMB 8052 5292515 YP_001308428.1 CDS Cbei_1292 NC_009617.1 1526936 1527874 D KEGG: cpr:CPR_1374 hypothetical protein; hypothetical protein 1526936..1527874 Clostridium beijerinckii NCIMB 8052 5292516 YP_001308429.1 CDS Cbei_1293 NC_009617.1 1528035 1529492 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1528035..1529492 Clostridium beijerinckii NCIMB 8052 5292517 YP_001308430.1 CDS Cbei_1294 NC_009617.1 1529504 1530400 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 1529504..1530400 Clostridium beijerinckii NCIMB 8052 5292518 YP_001308431.1 CDS Cbei_1295 NC_009617.1 1530397 1530837 D KEGG: cpr:CPR_1404 ACT domain protein; hypothetical protein 1530397..1530837 Clostridium beijerinckii NCIMB 8052 5292519 YP_001308432.1 CDS Cbei_1296 NC_009617.1 1531054 1531608 D hypothetical protein 1531054..1531608 Clostridium beijerinckii NCIMB 8052 5292520 YP_001308433.1 CDS Cbei_1297 NC_009617.1 1532046 1532711 D hypothetical protein 1532046..1532711 Clostridium beijerinckii NCIMB 8052 5292521 YP_001308434.1 CDS Cbei_1298 NC_009617.1 1533013 1533354 R hypothetical protein complement(1533013..1533354) Clostridium beijerinckii NCIMB 8052 5292522 YP_001308435.1 CDS Cbei_1299 NC_009617.1 1533947 1535086 D KEGG: ljo:LJ1035 hypothetical protein; hypothetical protein 1533947..1535086 Clostridium beijerinckii NCIMB 8052 5292523 YP_001308436.1 CDS Cbei_1300 NC_009617.1 1535644 1535784 D KEGG: cpf:CPF_1488 hypothetical protein; hypothetical protein 1535644..1535784 Clostridium beijerinckii NCIMB 8052 5292524 YP_001308437.1 CDS Cbei_1301 NC_009617.1 1536000 1537073 D KEGG: cth:Cthe_2522 membrane associated protein; membrane associated protein 1536000..1537073 Clostridium beijerinckii NCIMB 8052 5292525 YP_001308438.1 CDS Cbei_1302 NC_009617.1 1537433 1537987 D TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: ctc:CTC01788 RNA polymerase sigma-70 factor; ECF subfamily RNA polymerase sigma-24 factor 1537433..1537987 Clostridium beijerinckii NCIMB 8052 5292526 YP_001308439.1 CDS Cbei_1303 NC_009617.1 1537989 1539230 D KEGG: cth:Cthe_2522 membrane associated protein; hypothetical protein 1537989..1539230 Clostridium beijerinckii NCIMB 8052 5292527 YP_001308440.1 CDS Cbei_1304 NC_009617.1 1539675 1540625 D KEGG: ddi:DDB_0220019 C2 domain-containing protein; hypothetical protein 1539675..1540625 Clostridium beijerinckii NCIMB 8052 5292528 YP_001308441.1 CDS Cbei_1305 NC_009617.1 1540942 1541889 D KEGG: tte:TTE0419 lysophospholipase; lysophospholipase 1540942..1541889 Clostridium beijerinckii NCIMB 8052 5292529 YP_001308442.1 CDS Cbei_1306 NC_009617.1 1542041 1542538 D this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 1542041..1542538 Clostridium beijerinckii NCIMB 8052 5292530 YP_001308443.1 CDS Cbei_1307 NC_009617.1 1542783 1543658 R PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: cac:CAC2818 AraC-type DNA-binding domain-containing protein, transcriptional regulator; helix-turn-helix domain-containing protein complement(1542783..1543658) Clostridium beijerinckii NCIMB 8052 5292531 YP_001308444.1 CDS murE NC_009617.1 1543978 1545447 D involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1543978..1545447 Clostridium beijerinckii NCIMB 8052 5292532 YP_001308445.1 CDS Cbei_1309 NC_009617.1 1545493 1546713 D PFAM: sodium:dicarboxylate symporter; KEGG: bcl:ABC1665 H+/sodium:glutamate symporter; sodium:dicarboxylate symporter 1545493..1546713 Clostridium beijerinckii NCIMB 8052 5292533 YP_001308446.1 CDS Cbei_1310 NC_009617.1 1547158 1547982 D PFAM: RelA/SpoT domain protein; KEGG: cpr:CPR_1575 GTP pyrophosphokinase-like protein; RelA/SpoT domain-containing protein 1547158..1547982 Clostridium beijerinckii NCIMB 8052 5292534 YP_001308447.1 CDS Cbei_1311 NC_009617.1 1548048 1548923 D PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: cpe:CPE0393 3-hydroxyisobutyrate dehydrogenase; NAD-binding 6-phosphogluconate dehydrogenase 1548048..1548923 Clostridium beijerinckii NCIMB 8052 5292535 YP_001308448.1 CDS Cbei_1312 NC_009617.1 1549152 1550300 D PFAM: aminotransferase, class V; KEGG: cpf:CPF_1667 aminotransferase, class V; class V aminotransferase 1549152..1550300 Clostridium beijerinckii NCIMB 8052 5292536 YP_001308449.1 CDS Cbei_1313 NC_009617.1 1550300 1551457 D Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI 1550300..1551457 Clostridium beijerinckii NCIMB 8052 5292537 YP_001308450.1 CDS Cbei_1314 NC_009617.1 1551524 1552273 R PFAM: protein of unknown function DUF1275; KEGG: mac:MA1282 hypothetical protein; hypothetical protein complement(1551524..1552273) Clostridium beijerinckii NCIMB 8052 5292538 YP_001308451.1 CDS Cbei_1315 NC_009617.1 1552544 1553689 D PFAM: tRNA synthetase, class II (G, H, P and S); KEGG: cno:NT01CX_1060 histidyl-tRNA synthetase; histidine--tRNA ligase 1552544..1553689 Clostridium beijerinckii NCIMB 8052 5292539 YP_001308452.1 CDS Cbei_1316 NC_009617.1 1553692 1554321 D TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase, catalytic region; KEGG: cno:NT01CX_1061 ATP phosphoribosyltransferase; ATP phosphoribosyltransferase 1553692..1554321 Clostridium beijerinckii NCIMB 8052 5292540 YP_001308453.1 CDS Cbei_1317 NC_009617.1 1554454 1555752 D PFAM: histidinol dehydrogenase; KEGG: cac:CAC0937 histidinol dehydrogenase; histidinol dehydrogenase 1554454..1555752 Clostridium beijerinckii NCIMB 8052 5292541 YP_001308454.1 CDS Cbei_1318 NC_009617.1 1555739 1556779 D PFAM: aminotransferase, class I and II; KEGG: cno:NT01CX_1063 histidinol-phosphate aminotransferase; class I and II aminotransferase 1555739..1556779 Clostridium beijerinckii NCIMB 8052 5292542 YP_001308455.1 CDS hisB NC_009617.1 1557002 1557589 D catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 1557002..1557589 Clostridium beijerinckii NCIMB 8052 5292543 YP_001308456.1 CDS hisH NC_009617.1 1557660 1558337 D with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 1557660..1558337 Clostridium beijerinckii NCIMB 8052 5292544 YP_001308457.1 CDS Cbei_1321 NC_009617.1 1558334 1559056 D catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1558334..1559056 Clostridium beijerinckii NCIMB 8052 5292545 YP_001308458.1 CDS Cbei_1322 NC_009617.1 1559061 1559822 D catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 1559061..1559822 Clostridium beijerinckii NCIMB 8052 5292546 YP_001308459.1 CDS hisI NC_009617.1 1559880 1560209 D PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 1559880..1560209 Clostridium beijerinckii NCIMB 8052 5292547 YP_001308460.1 CDS Cbei_1324 NC_009617.1 1560241 1560567 D PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: cac:CAC0943 phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphohydrolase 1560241..1560567 Clostridium beijerinckii NCIMB 8052 5292548 YP_001308461.1 CDS Cbei_1325 NC_009617.1 1561530 1562345 D KEGG: ctc:CTC02377 hypothetical protein; hypothetical protein 1561530..1562345 Clostridium beijerinckii NCIMB 8052 5292549 YP_001308462.1 CDS tig NC_009617.1 1562441 1563724 D Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1562441..1563724 Clostridium beijerinckii NCIMB 8052 5292550 YP_001308463.1 CDS clpP NC_009617.1 1563880 1564479 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 1563880..1564479 Clostridium beijerinckii NCIMB 8052 5292551 YP_001308464.1 CDS clpX NC_009617.1 1564522 1565811 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1564522..1565811 Clostridium beijerinckii NCIMB 8052 5292552 YP_001308465.1 CDS Cbei_1329 NC_009617.1 1566058 1567734 D KEGG: cpr:CPR_1383 ATP-dependent protease LonB; TIGRFAM: Sporulation protease LonB; PFAM: magnesium chelatase, ChlI subunit; ATPase AAA, central domain protein; peptidase S16, lon domain protein; SMART: ATPase AAA; sporulation protease LonB 1566058..1567734 Clostridium beijerinckii NCIMB 8052 5292553 YP_001308466.1 CDS Cbei_1330 NC_009617.1 1568042 1570372 D KEGG: ctc:CTC02372 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; ATPase AAA, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; ATP-dependent protease La 1568042..1570372 Clostridium beijerinckii NCIMB 8052 5292554 YP_001308467.1 CDS engB NC_009617.1 1570362 1570958 D binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 1570362..1570958 Clostridium beijerinckii NCIMB 8052 5292555 YP_001308468.1 CDS Cbei_1332 NC_009617.1 1571180 1571665 D KEGG: cpf:CPF_1642 hypothetical protein; hypothetical protein 1571180..1571665 Clostridium beijerinckii NCIMB 8052 5292556 YP_001308469.1 CDS Cbei_1333 NC_009617.1 1571697 1571951 D KEGG: cpe:CPE1386 hypothetical protein; hypothetical protein 1571697..1571951 Clostridium beijerinckii NCIMB 8052 5292557 YP_001308470.1 CDS Cbei_1334 NC_009617.1 1572066 1572590 D KEGG: cpr:CPR_1378 hypothetical protein; hypothetical protein 1572066..1572590 Clostridium beijerinckii NCIMB 8052 5292558 YP_001308471.1 CDS Cbei_1335 NC_009617.1 1572880 1573803 R KEGG: cpe:CPE1384 hypothetical protein; hypothetical protein complement(1572880..1573803) Clostridium beijerinckii NCIMB 8052 5292559 YP_001308472.1 CDS Cbei_1336 NC_009617.1 1573941 1574348 R PFAM: ferric-uptake regulator; KEGG: cno:NT01CX_0363 transcriptional regulator, Fur family; ferric uptake regulator family protein complement(1573941..1574348) Clostridium beijerinckii NCIMB 8052 5292560 YP_001308473.1 CDS Cbei_1337 NC_009617.1 1574762 1575088 D KEGG: cpr:CPR_1229 hypothetical protein; hypothetical protein 1574762..1575088 Clostridium beijerinckii NCIMB 8052 5292561 YP_001308474.1 CDS Cbei_1338 NC_009617.1 1575610 1577094 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(1575610..1577094) Clostridium beijerinckii NCIMB 8052 5292562 YP_001308475.1 CDS Cbei_1339 NC_009617.1 1577394 1579409 D PFAM: UvrD/REP helicase; KEGG: cpr:CPR_1226 ATP-dependent DNA helicase PcrA; UvrD/REP helicase 1577394..1579409 Clostridium beijerinckii NCIMB 8052 5292563 YP_001308476.1 CDS Cbei_1340 NC_009617.1 1579485 1580462 D PFAM: phage integrase family protein; KEGG: cpe:CPE1095 probable integrase/recombinase; phage integrase family protein 1579485..1580462 Clostridium beijerinckii NCIMB 8052 5292564 YP_001308477.1 CDS Cbei_1341 NC_009617.1 1580565 1581500 R PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator complement(1580565..1581500) Clostridium beijerinckii NCIMB 8052 5292565 YP_001308478.1 CDS Cbei_1342 NC_009617.1 1581773 1583218 R KEGG: ddi:DDBDRAFT_0190888 hypothetical protein; hypothetical protein complement(1581773..1583218) Clostridium beijerinckii NCIMB 8052 5292566 YP_001308479.1 CDS Cbei_1343 NC_009617.1 1583432 1583641 D PFAM: protein of unknown function DUF1508; KEGG: chu:CHU_2608 hypothetical protein; hypothetical protein 1583432..1583641 Clostridium beijerinckii NCIMB 8052 5292567 YP_001308480.1 CDS Cbei_1344 NC_009617.1 1583739 1584464 D hypothetical protein 1583739..1584464 Clostridium beijerinckii NCIMB 8052 5292568 YP_001308481.1 CDS Cbei_1345 NC_009617.1 1584496 1584795 D hypothetical protein 1584496..1584795 Clostridium beijerinckii NCIMB 8052 5292569 YP_001308482.1 CDS Cbei_1346 NC_009617.1 1585217 1585690 D KEGG: mla:Mlab_1036 hypothetical protein; hypothetical protein 1585217..1585690 Clostridium beijerinckii NCIMB 8052 5292570 YP_001308483.1 CDS Cbei_1347 NC_009617.1 1585994 1586194 R hypothetical protein complement(1585994..1586194) Clostridium beijerinckii NCIMB 8052 5292571 YP_001308484.1 CDS Cbei_1348 NC_009617.1 1586347 1587000 D hypothetical protein 1586347..1587000 Clostridium beijerinckii NCIMB 8052 5292572 YP_001308485.1 CDS Cbei_1349 NC_009617.1 1587498 1587851 D hypothetical protein 1587498..1587851 Clostridium beijerinckii NCIMB 8052 5292573 YP_001308486.1 CDS Cbei_1350 NC_009617.1 1587940 1588896 D hypothetical protein 1587940..1588896 Clostridium beijerinckii NCIMB 8052 5292574 YP_001308487.1 CDS Cbei_1351 NC_009617.1 1589377 1589790 D KEGG: cac:CAC1162 hypothetical protein, CF-11 family; hypothetical protein 1589377..1589790 Clostridium beijerinckii NCIMB 8052 5292575 YP_001308488.1 CDS Cbei_1352 NC_009617.1 1590099 1591946 D hypothetical protein 1590099..1591946 Clostridium beijerinckii NCIMB 8052 5292576 YP_001308489.1 CDS Cbei_1353 NC_009617.1 1592456 1595923 D KEGG: bsu:BG13626 hypothetical protein; hypothetical protein 1592456..1595923 Clostridium beijerinckii NCIMB 8052 5292577 YP_001308490.1 CDS Cbei_1354 NC_009617.1 1596636 1597271 D hypothetical protein 1596636..1597271 Clostridium beijerinckii NCIMB 8052 5292578 YP_001308491.1 CDS Cbei_1355 NC_009617.1 1597845 1598399 D hypothetical protein 1597845..1598399 Clostridium beijerinckii NCIMB 8052 5292579 YP_001308492.1 CDS Cbei_1356 NC_009617.1 1598410 1598715 D hypothetical protein 1598410..1598715 Clostridium beijerinckii NCIMB 8052 5292580 YP_001308493.1 CDS Cbei_1357 NC_009617.1 1598786 1599625 D KEGG: sha:SH2354 hypothetical protein; hypothetical protein 1598786..1599625 Clostridium beijerinckii NCIMB 8052 5292581 YP_001308494.1 CDS Cbei_1358 NC_009617.1 1599758 1600015 D PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 1599758..1600015 Clostridium beijerinckii NCIMB 8052 5292582 YP_001308495.1 CDS Cbei_1359 NC_009617.1 1600027 1600443 D hypothetical protein 1600027..1600443 Clostridium beijerinckii NCIMB 8052 5292583 YP_001308496.1 CDS Cbei_1360 NC_009617.1 1600436 1602001 D KEGG: swo:Swol_1310 hypothetical protein; hypothetical protein 1600436..1602001 Clostridium beijerinckii NCIMB 8052 5292584 YP_001308497.1 CDS Cbei_1361 NC_009617.1 1602034 1602261 D hypothetical protein 1602034..1602261 Clostridium beijerinckii NCIMB 8052 5292585 YP_001308498.1 CDS Cbei_1362 NC_009617.1 1602375 1602947 D hypothetical protein 1602375..1602947 Clostridium beijerinckii NCIMB 8052 5292586 YP_001308499.1 CDS Cbei_1363 NC_009617.1 1603061 1603216 D hypothetical protein 1603061..1603216 Clostridium beijerinckii NCIMB 8052 5292587 YP_001308500.1 CDS Cbei_1364 NC_009617.1 1603238 1603501 D hypothetical protein 1603238..1603501 Clostridium beijerinckii NCIMB 8052 5292588 YP_001308501.1 CDS Cbei_1365 NC_009617.1 1603572 1604840 D hypothetical protein 1603572..1604840 Clostridium beijerinckii NCIMB 8052 5292589 YP_001308502.1 CDS Cbei_1366 NC_009617.1 1604866 1605522 D hypothetical protein 1604866..1605522 Clostridium beijerinckii NCIMB 8052 5292590 YP_001308503.1 CDS Cbei_1367 NC_009617.1 1605526 1606107 D hypothetical protein 1605526..1606107 Clostridium beijerinckii NCIMB 8052 5292591 YP_001308504.1 CDS Cbei_1368 NC_009617.1 1606185 1611854 D TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: bsu:BG13596 similar to lytic transglycosylase; TP901 family phage tail tape measure protein 1606185..1611854 Clostridium beijerinckii NCIMB 8052 5292592 YP_001308505.1 CDS Cbei_1369 NC_009617.1 1611921 1612217 D hypothetical protein 1611921..1612217 Clostridium beijerinckii NCIMB 8052 5292593 YP_001308506.1 CDS Cbei_1370 NC_009617.1 1612317 1613705 D PFAM: phage portal protein, SPP1; KEGG: swo:Swol_1309 hypothetical protein; phage portal protein, SPP1 1612317..1613705 Clostridium beijerinckii NCIMB 8052 5292594 YP_001308507.1 CDS Cbei_1371 NC_009617.1 1614530 1615357 D hypothetical protein 1614530..1615357 Clostridium beijerinckii NCIMB 8052 5292595 YP_001308508.1 CDS Cbei_1372 NC_009617.1 1615389 1615922 D hypothetical protein 1615389..1615922 Clostridium beijerinckii NCIMB 8052 5292596 YP_001308509.1 CDS Cbei_1373 NC_009617.1 1616074 1616661 D PFAM: phage integrase family protein; KEGG: cac:CAC2813 predicted integrase of XerC/XerD family; phage integrase family protein 1616074..1616661 Clostridium beijerinckii NCIMB 8052 5292597 YP_001308510.1 CDS Cbei_1374 NC_009617.1 1616737 1617120 D hypothetical protein 1616737..1617120 Clostridium beijerinckii NCIMB 8052 5292598 YP_001308511.1 CDS Cbei_1375 NC_009617.1 1617133 1618221 D PFAM: Ig domain protein, group 2 domain protein; KEGG: swo:Swol_1304 hypothetical protein; Ig domain-containing protein 1617133..1618221 Clostridium beijerinckii NCIMB 8052 5292599 YP_001308512.1 CDS Cbei_1376 NC_009617.1 1618237 1618506 D KEGG: ctc:pE88_04 UviB homologous protein; UviB-like protein 1618237..1618506 Clostridium beijerinckii NCIMB 8052 5292600 YP_001308513.1 CDS Cbei_1377 NC_009617.1 1618708 1619007 D hypothetical protein 1618708..1619007 Clostridium beijerinckii NCIMB 8052 5292601 YP_001308514.1 CDS Cbei_1378 NC_009617.1 1618997 1619557 D hypothetical protein 1618997..1619557 Clostridium beijerinckii NCIMB 8052 5292602 YP_001308515.1 CDS Cbei_1380 NC_009617.1 1620302 1621297 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: msu:MS0063 periplasmic sugar-binding proteins; periplasmic binding protein/LacI transcriptional regulator complement(1620302..1621297) Clostridium beijerinckii NCIMB 8052 5296339 YP_001308516.1 CDS Cbei_1381 NC_009617.1 1621364 1622989 R PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: cpf:CPF_2344 DNA-binding response regulator, AraC family; response regulator receiver protein complement(1621364..1622989) Clostridium beijerinckii NCIMB 8052 5292604 YP_001308517.1 CDS Cbei_1382 NC_009617.1 1623049 1624788 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase internal region; KEGG: ctc:CTC01848 two-component sensor kinase YesM; histidine kinase internal region complement(1623049..1624788) Clostridium beijerinckii NCIMB 8052 5292605 YP_001308518.1 CDS Cbei_1383 NC_009617.1 1625239 1626981 D uncharacterized member of the SSS superfamily of sodium-dependent solute transporters; unknown function; symporter YidK 1625239..1626981 Clostridium beijerinckii NCIMB 8052 5292606 YP_001308519.1 CDS Cbei_1384 NC_009617.1 1627529 1627864 D hypothetical protein 1627529..1627864 Clostridium beijerinckii NCIMB 8052 5292607 YP_001308520.1 CDS Cbei_1385 NC_009617.1 1628379 1630472 D KEGG: cno:NT01CX_1629 cell division protein FtsA; cell division protein FtsA 1628379..1630472 Clostridium beijerinckii NCIMB 8052 5292608 YP_001308521.1 CDS Cbei_1386 NC_009617.1 1630626 1631807 D TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: cpr:CPR_1225 amidohydrolase family protein; amidohydrolase 1630626..1631807 Clostridium beijerinckii NCIMB 8052 5292609 YP_001308522.1 CDS Cbei_1387 NC_009617.1 1631901 1632875 D TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cpf:CPF_1414 pseudouridine synthase, RluA family; RluA family pseudouridine synthase 1631901..1632875 Clostridium beijerinckii NCIMB 8052 5292610 YP_001308523.1 CDS Cbei_1388 NC_009617.1 1632885 1634501 D PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: cpf:CPF_1413 stage V sporulation protein B; polysaccharide biosynthesis protein 1632885..1634501 Clostridium beijerinckii NCIMB 8052 5292611 YP_001308524.1 CDS Cbei_1389 NC_009617.1 1634681 1636141 R TIGRFAM: Sporulation stage V, protein B; PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: cpe:CPE1648 stage V sporulation protein B; sporulation stage V, protein B complement(1634681..1636141) Clostridium beijerinckii NCIMB 8052 5292612 YP_001308525.1 CDS Cbei_1390 NC_009617.1 1636368 1637198 D PFAM: chemotaxis sensory transducer; KEGG: cac:CAC1601 methyl-accepting chemotaxis-like protein (chemotaxis sensory transducer); methyl-accepting chemotaxis sensory transducer 1636368..1637198 Clostridium beijerinckii NCIMB 8052 5292613 YP_001308526.1 CDS Cbei_1391 NC_009617.1 1637427 1638257 D PFAM: chemotaxis sensory transducer; KEGG: cac:CAC1601 methyl-accepting chemotaxis-like protein (chemotaxis sensory transducer); methyl-accepting chemotaxis sensory transducer 1637427..1638257 Clostridium beijerinckii NCIMB 8052 5292614 YP_001308527.1 CDS Cbei_1392 NC_009617.1 1638507 1639811 D KEGG: cno:NT01CX_1637 predicted membrane protein; membrane protein 1638507..1639811 Clostridium beijerinckii NCIMB 8052 5292615 YP_001308528.1 CDS Cbei_1393 NC_009617.1 1639943 1640521 D KEGG: ctc:CTC00991 hypothetical protein; hypothetical protein 1639943..1640521 Clostridium beijerinckii NCIMB 8052 5292616 YP_001308529.1 CDS Cbei_1394 NC_009617.1 1640496 1642154 D PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cpf:CPF_1897 radical SAM domain protein; radical SAM domain-containing protein 1640496..1642154 Clostridium beijerinckii NCIMB 8052 5292617 YP_001308530.1 CDS Cbei_1395 NC_009617.1 1642432 1642893 D PFAM: regulatory protein, MarR; KEGG: cac:CAC3406 transcriptional regulator, MarR/EmrR family; MarR family transcriptional regulator 1642432..1642893 Clostridium beijerinckii NCIMB 8052 5292618 YP_001308531.1 CDS Cbei_1396 NC_009617.1 1642905 1644218 D PFAM: BAAT/Acyl-CoA thioester hydrolase-like; KEGG: cac:CAC3407 acyl-CoA thioesterase 1; BAAT/Acyl-CoA thioester hydrolase-like protein 1642905..1644218 Clostridium beijerinckii NCIMB 8052 5292619 YP_001308532.1 CDS Cbei_1397 NC_009617.1 1644433 1644753 D PFAM: transposase IS3/IS911 family protein; KEGG: san:gbs0621 hypothetical protein; transposase IS3/IS911 family protein 1644433..1644753 Clostridium beijerinckii NCIMB 8052 5292620 YP_001308533.1 CDS Cbei_1398 NC_009617.1 1644798 1645613 D PFAM: Integrase, catalytic region; KEGG: lca:LSEI_1907 transposase; integrase catalytic subunit 1644798..1645613 Clostridium beijerinckii NCIMB 8052 5292621 YP_001308534.1 CDS Cbei_1400 NC_009617.1 1646171 1647121 D PFAM: glycosyl transferase, family 4; KEGG: cpf:CPF_1886 glycosyl transferase, group 4 family protein; glycosyl transferase family protein 1646171..1647121 Clostridium beijerinckii NCIMB 8052 5296340 YP_001308535.1 CDS Cbei_1401 NC_009617.1 1647491 1648174 D PFAM: Vitamin B12 dependent methionine synthase, activation region; KEGG: ctc:CTC01807 5-methyltetrahydrofolate--homocysteine methyltransferase; vitamin B12 dependent methionine synthase, activation region 1647491..1648174 Clostridium beijerinckii NCIMB 8052 5292623 YP_001308536.1 CDS Cbei_1402 NC_009617.1 1648164 1650569 D PFAM: dihydropteroate synthase, DHPS; homocysteine S-methyltransferase; Methionine synthase, B12-binding module, cap domain protein; cobalamin B12-binding domain protein; KEGG: cno:NT01CX_2109 5-methyltetrahydrofolate--homocysteine methyltransferase; homocysteine S-methyltransferase 1648164..1650569 Clostridium beijerinckii NCIMB 8052 5292624 YP_001308537.1 CDS Cbei_1403 NC_009617.1 1650680 1651483 R KEGG: cac:CAC1330 metal-dependent hydrolase of the beta-lactamase superfamily, possible sulfatase; beta-lactamase superfamily hydrolase complement(1650680..1651483) Clostridium beijerinckii NCIMB 8052 5292625 YP_001308538.1 CDS Cbei_1404 NC_009617.1 1651681 1652280 D KEGG: cno:NT01CX_1651 hypothetical protein; hypothetical protein 1651681..1652280 Clostridium beijerinckii NCIMB 8052 5292626 YP_001308539.1 CDS Cbei_1405 NC_009617.1 1652552 1652797 D PFAM: protein of unknown function DUF1292; KEGG: cpr:CPR_1590 hypothetical protein; hypothetical protein 1652552..1652797 Clostridium beijerinckii NCIMB 8052 5292627 YP_001308540.1 CDS Cbei_1406 NC_009617.1 1652814 1653212 D KEGG: cpr:CPR_1589 hypothetical protein; hypothetical protein 1652814..1653212 Clostridium beijerinckii NCIMB 8052 5292628 YP_001308541.1 CDS Cbei_1407 NC_009617.1 1654163 1654363 D KEGG: cpr:CPR_1073 hypothetical protein; hypothetical protein 1654163..1654363 Clostridium beijerinckii NCIMB 8052 5292629 YP_001308542.1 CDS Cbei_1408 NC_009617.1 1654370 1655278 D catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 1654370..1655278 Clostridium beijerinckii NCIMB 8052 5292630 YP_001308543.1 CDS Cbei_1409 NC_009617.1 1655378 1656775 D catalyzes the removal of amino acids from the N termini of peptides; aminopeptidase 1 1655378..1656775 Clostridium beijerinckii NCIMB 8052 5292631 YP_001308544.1 CDS Cbei_1410 NC_009617.1 1656862 1657701 R PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cpr:CPR_1092 predicted metal-dependent phosphoesterase (PHP family); phosphotransferase domain-containing protein complement(1656862..1657701) Clostridium beijerinckii NCIMB 8052 5292632 YP_001308545.1 CDS Cbei_1411 NC_009617.1 1657953 1658435 R KEGG: cac:CAC1093 hypothetical secreted protein; hypothetical protein complement(1657953..1658435) Clostridium beijerinckii NCIMB 8052 5292633 YP_001308546.1 CDS Cbei_1412 NC_009617.1 1658581 1659603 D PFAM: Pyruvate kinase, barrel; KEGG: cpe:CPE1025 probable pyruvate kinase; pyruvate kinase 1658581..1659603 Clostridium beijerinckii NCIMB 8052 5292634 YP_001308547.1 CDS Cbei_1413 NC_009617.1 1659774 1660268 R KEGG: cno:NT01CX_1375 predicted membrane protein; membrane protein complement(1659774..1660268) Clostridium beijerinckii NCIMB 8052 5292635 YP_001308548.1 CDS Cbei_1414 NC_009617.1 1660446 1661051 R PFAM: heat shock protein DnaJ domain protein; Tetratricopeptide TPR_2 repeat protein; KEGG: cno:NT01CX_1376 molecular chaperone, DnaJ family (contain C-term. Zn finger domain); heat shock protein DnaJ domain-containing protein complement(1660446..1661051) Clostridium beijerinckii NCIMB 8052 5292636 YP_001308549.1 CDS Cbei_1415 NC_009617.1 1661051 1661956 R KEGG: cac:CAC0649 uncharacterized protein, homolog of Thermotoga maritima (4982386); hypothetical protein complement(1661051..1661956) Clostridium beijerinckii NCIMB 8052 5292637 YP_001308550.1 CDS Cbei_1416 NC_009617.1 1662366 1662908 D PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: cpr:CPR_0682 rubredoxin/rubrerythrin; rubrerythrin 1662366..1662908 Clostridium beijerinckii NCIMB 8052 5292638 YP_001308551.1 CDS Cbei_1417 NC_009617.1 1663012 1663656 R PFAM: Appr-1-p processing domain protein; KEGG: cth:Cthe_2058 Appr-1-p processing protein; appr-1-p processing domain-containing protein complement(1663012..1663656) Clostridium beijerinckii NCIMB 8052 5292639 YP_001308552.1 CDS Cbei_1418 NC_009617.1 1663898 1664164 R hypothetical protein complement(1663898..1664164) Clostridium beijerinckii NCIMB 8052 5292640 YP_001308553.1 CDS Cbei_1419 NC_009617.1 1665220 1666587 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cac:CAC0847 probable cation efflux pump (multidrug resistance protein); MATE efflux family protein 1665220..1666587 Clostridium beijerinckii NCIMB 8052 5292641 YP_001308554.1 CDS Cbei_1420 NC_009617.1 1666790 1667824 D KEGG: ctc:CTC00791 hypothetical protein; hypothetical protein 1666790..1667824 Clostridium beijerinckii NCIMB 8052 5292642 YP_001308555.1 CDS Cbei_1421 NC_009617.1 1667839 1668879 D KEGG: ctc:CTC00792 hypothetical protein; hypothetical protein 1667839..1668879 Clostridium beijerinckii NCIMB 8052 5292643 YP_001308556.1 CDS Cbei_1422 NC_009617.1 1668991 1669242 D KEGG: cno:NT01CX_1483 hypothetical protein; hypothetical protein 1668991..1669242 Clostridium beijerinckii NCIMB 8052 5292644 YP_001308557.1 CDS Cbei_1423 NC_009617.1 1669519 1670295 D transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 1669519..1670295 Clostridium beijerinckii NCIMB 8052 5292645 YP_001308558.1 CDS Cbei_1424 NC_009617.1 1670384 1670962 R KEGG: cno:NT01CX_0179 serine/threonine kinase related protein; serine/threonine kinase-like protein complement(1670384..1670962) Clostridium beijerinckii NCIMB 8052 5292646 YP_001308559.1 CDS Cbei_1425 NC_009617.1 1671119 1671616 D KEGG: cac:CAC0544 permease; permease 1671119..1671616 Clostridium beijerinckii NCIMB 8052 5292647 YP_001308560.1 CDS Cbei_1426 NC_009617.1 1672067 1672708 D PFAM: protein of unknown function DUF1121; KEGG: ctc:CTC00589 hypothetical protein; hypothetical protein 1672067..1672708 Clostridium beijerinckii NCIMB 8052 5292648 YP_001308561.1 CDS Cbei_1427 NC_009617.1 1672992 1674653 D TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase, class Ic; KEGG: cpf:CPF_1255 glutamyl-tRNA synthetase; glutamyl-tRNA synthetase 1672992..1674653 Clostridium beijerinckii NCIMB 8052 5292649 YP_001308562.1 CDS Cbei_1428 NC_009617.1 1674736 1676499 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: cac:CAC2547 possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain; methyl-accepting chemotaxis sensory transducer complement(1674736..1676499) Clostridium beijerinckii NCIMB 8052 5292650 YP_001308563.1 CDS Cbei_1429 NC_009617.1 1676766 1678427 R catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase complement(1676766..1678427) Clostridium beijerinckii NCIMB 8052 5292651 YP_001308564.1 CDS Cbei_1430 NC_009617.1 1678946 1679602 D PFAM: protein of unknown function DUF161; KEGG: dsy:DSY3984 hypothetical protein; hypothetical protein 1678946..1679602 Clostridium beijerinckii NCIMB 8052 5292652 YP_001308565.1 CDS Cbei_1431 NC_009617.1 1680235 1681512 D TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); seryl-tRNA synthetase, class IIa; KEGG: pfu:PF1204 seryl-tRNA synthetase; seryl-tRNA synthetase 1680235..1681512 Clostridium beijerinckii NCIMB 8052 5292653 YP_001308566.1 CDS Cbei_1432 NC_009617.1 1681863 1682096 D KEGG: cac:CAC0072 hypothetical protein; hypothetical protein 1681863..1682096 Clostridium beijerinckii NCIMB 8052 5292654 YP_001308567.1 CDS Cbei_1433 NC_009617.1 1682137 1682775 D KEGG: sec:SC064 hypothetical protein; hypothetical protein 1682137..1682775 Clostridium beijerinckii NCIMB 8052 5292655 YP_001308568.1 CDS Cbei_1434 NC_009617.1 1683166 1684869 D catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 1683166..1684869 Clostridium beijerinckii NCIMB 8052 5292656 YP_001308569.1 CDS Cbei_1435 NC_009617.1 1686239 1688059 D PFAM: Heavy metal transport/detoxification protein; KEGG: cac:CAC1554 heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis CycZ-like domain, possible membrane copper tolerance protein; heavy metal transport/detoxification protein 1686239..1688059 Clostridium beijerinckii NCIMB 8052 5292657 YP_001308570.1 CDS Cbei_1436 NC_009617.1 1688403 1689662 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: swo:Swol_0162 subtilisin-like serine proteases-like; peptidase S8/S53 subtilisin kexin sedolisin 1688403..1689662 Clostridium beijerinckii NCIMB 8052 5292658 YP_001308571.1 CDS Cbei_1437 NC_009617.1 1689916 1691145 D KEGG: bca:BCE_0720 lipoprotein; lipoprotein 1689916..1691145 Clostridium beijerinckii NCIMB 8052 5292659 YP_001308572.1 CDS Cbei_1438 NC_009617.1 1691219 1691575 D KEGG: bcz:pE33L466_0396 hypothetical protein; hypothetical protein 1691219..1691575 Clostridium beijerinckii NCIMB 8052 5292660 YP_001308573.1 CDS Cbei_1439 NC_009617.1 1691825 1692859 R PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: ooe:OEOE_0808 transcriptional regulator; LacI family transcriptional regulator complement(1691825..1692859) Clostridium beijerinckii NCIMB 8052 5292661 YP_001308574.1 CDS Cbei_1440 NC_009617.1 1693306 1694598 D PFAM: extracellular solute-binding protein, family 1; KEGG: oih:OB2570 multiple sugar-binding transport system multiple sugar-binding protein; extracellular solute-binding protein 1693306..1694598 Clostridium beijerinckii NCIMB 8052 5292662 YP_001308575.1 CDS Cbei_1441 NC_009617.1 1694866 1695801 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB2569 multiple sugar-binding transport system permease; binding-protein-dependent transport system inner membrane protein 1694866..1695801 Clostridium beijerinckii NCIMB 8052 5292663 YP_001308576.1 CDS Cbei_1442 NC_009617.1 1695801 1696658 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB2568 multiple sugar-binding transport system permease; binding-protein-dependent transport system inner membrane protein 1695801..1696658 Clostridium beijerinckii NCIMB 8052 5292664 YP_001308577.1 CDS Cbei_1443 NC_009617.1 1696780 1699152 D PFAM: glycoside hydrolase, family 31; KEGG: lac:LBA1812 alpha-glucosidase II; Alpha-glucosidase 1696780..1699152 Clostridium beijerinckii NCIMB 8052 5292665 YP_001308578.1 CDS Cbei_1444 NC_009617.1 1699187 1700851 D PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: lmf:LMOf2365_0270 oligo-1,6-glucosidase; alpha amylase 1699187..1700851 Clostridium beijerinckii NCIMB 8052 5292666 YP_001308579.1 CDS Cbei_1445 NC_009617.1 1701070 1701957 D PFAM: protein of unknown function DUF1002; KEGG: ctc:CTC01501 hypothetical protein; hypothetical protein 1701070..1701957 Clostridium beijerinckii NCIMB 8052 5292667 YP_001308580.1 CDS nhaA NC_009617.1 1702276 1703478 D exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 1702276..1703478 Clostridium beijerinckii NCIMB 8052 5292668 YP_001308581.1 CDS Cbei_1447 NC_009617.1 1703663 1703869 D PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: cpr:CPR_1411 small, acid-soluble spore protein; small acid-soluble spore protein, alpha/beta type 1703663..1703869 Clostridium beijerinckii NCIMB 8052 5292669 YP_001308582.1 CDS Cbei_1448 NC_009617.1 1704406 1704771 D PFAM: ArsR family transcriptional regulator; KEGG: cpf:CPF_2588 cadmium resistance transcriptional regulator CadC; ArsR family transcriptional regulator 1704406..1704771 Clostridium beijerinckii NCIMB 8052 5292670 YP_001308583.1 CDS Cbei_1449 NC_009617.1 1704794 1707223 D TIGRFAM: ATPase P; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: dsy:DSY0829 hypothetical protein; heavy metal translocating P-type ATPase 1704794..1707223 Clostridium beijerinckii NCIMB 8052 5292671 YP_001308584.1 CDS Cbei_1450 NC_009617.1 1707350 1708042 D PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: cth:Cthe_2978 transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator 1707350..1708042 Clostridium beijerinckii NCIMB 8052 5292672 YP_001308585.1 CDS Cbei_1451 NC_009617.1 1708082 1708402 D PFAM: Rhodanese domain protein; KEGG: cac:CA_P0032 rhodanese-like domain; rhodanese domain-containing protein 1708082..1708402 Clostridium beijerinckii NCIMB 8052 5292673 YP_001308586.1 CDS Cbei_1452 NC_009617.1 1708476 1708835 D TIGRFAM: C_GCAxxG_C_C family protein; KEGG: cac:CA_P0033 hypothetical protein; C_GCAxxG_C_C family protein 1708476..1708835 Clostridium beijerinckii NCIMB 8052 5292674 YP_001308587.1 CDS Cbei_1453 NC_009617.1 1708917 1709783 R KEGG: bld:BLi02295 YodP; hypothetical protein complement(1708917..1709783) Clostridium beijerinckii NCIMB 8052 5292675 YP_001308588.1 CDS Cbei_1454 NC_009617.1 1710396 1712225 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: cpf:CPF_2369 subtilase family protein; peptidase S8/S53 subtilisin kexin sedolisin 1710396..1712225 Clostridium beijerinckii NCIMB 8052 5292676 YP_001308589.1 CDS Cbei_1455 NC_009617.1 1712400 1713614 D PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_2017 choline binding protein A; cell wall binding repeat-containing protein 1712400..1713614 Clostridium beijerinckii NCIMB 8052 5292677 YP_001308590.1 CDS Cbei_1456 NC_009617.1 1714215 1716053 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: cpf:CPF_2369 subtilase family protein; peptidase S8/S53 subtilisin kexin sedolisin 1714215..1716053 Clostridium beijerinckii NCIMB 8052 5292678 YP_001308591.1 CDS Cbei_1457 NC_009617.1 1716289 1716453 D KEGG: cth:Cthe_3121 hypothetical protein; hypothetical protein 1716289..1716453 Clostridium beijerinckii NCIMB 8052 5292679 YP_001308592.1 CDS Cbei_1458 NC_009617.1 1716799 1720317 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cth:Cthe_3120 pyruvate flavodoxin/ferredoxin oxidoreductase-like protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein complement(1716799..1720317) Clostridium beijerinckii NCIMB 8052 5292680 YP_001308593.1 CDS Cbei_1459 NC_009617.1 1720482 1720787 D KEGG: cth:Cthe_0266 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1720482..1720787 Clostridium beijerinckii NCIMB 8052 5292681 YP_001308594.1 CDS Cbei_1460 NC_009617.1 1721076 1721654 R KEGG: cac:CAC3379 uncharacterized protein, YQFW B.subtilis homolog; hypothetical protein complement(1721076..1721654) Clostridium beijerinckii NCIMB 8052 5292682 YP_001308595.1 CDS Cbei_1461 NC_009617.1 1722729 1722878 D hypothetical protein 1722729..1722878 Clostridium beijerinckii NCIMB 8052 5292683 YP_001308596.1 CDS Cbei_1462 NC_009617.1 1722981 1723220 D hypothetical protein 1722981..1723220 Clostridium beijerinckii NCIMB 8052 5292684 YP_001308597.1 CDS Cbei_1463 NC_009617.1 1724073 1726019 D PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; ATPase associated with various cellular activities, AAA_5; SMART: PAS domain containing protein; ATPase AAA; KEGG: cno:NT01CX_0345 aco operon expression regulatory protein; Fis family GAF modulated sigma54 specific transcriptional regulator 1724073..1726019 Clostridium beijerinckii NCIMB 8052 5292685 YP_001308598.1 CDS Cbei_1464 NC_009617.1 1726260 1727342 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cno:NT01CX_0344 2,3-butanediol dehydrogenase; alcohol dehydrogenase 1726260..1727342 Clostridium beijerinckii NCIMB 8052 5292686 YP_001308599.1 CDS Cbei_1465 NC_009617.1 1727494 1728384 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: cpf:CPF_1464 oxidoreductase, NAD-binding; ferredoxin-NADP(+) reductase subunit alpha 1727494..1728384 Clostridium beijerinckii NCIMB 8052 5292687 YP_001308600.1 CDS Cbei_1466 NC_009617.1 1728384 1729778 D function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase 1728384..1729778 Clostridium beijerinckii NCIMB 8052 5292688 YP_001308601.1 CDS Cbei_1467 NC_009617.1 1729997 1730779 D PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: mbu:Mbur_0990 metal-dependent phosphohydrolase; metal dependent phosphohydrolase 1729997..1730779 Clostridium beijerinckii NCIMB 8052 5292689 YP_001308602.1 CDS Cbei_1468 NC_009617.1 1731169 1732038 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: cac:CAC0087 predicted Co/Zn/Cd cation transporter; cation diffusion facilitator family transporter 1731169..1732038 Clostridium beijerinckii NCIMB 8052 5292690 YP_001308603.1 CDS Cbei_1469 NC_009617.1 1732207 1732659 D KEGG: cpf:CPF_2252 hypothetical protein; hypothetical protein 1732207..1732659 Clostridium beijerinckii NCIMB 8052 5292691 YP_001308604.1 CDS Cbei_1470 NC_009617.1 1732714 1733478 R PFAM: Extradiol ring-cleavage dioxygenase, class III protein, subunit B; KEGG: btk:BT9727_1700 conserved hypothetical protein, possible oxidoreductase; extradiol ring-cleavage dioxygenase III subunit B complement(1732714..1733478) Clostridium beijerinckii NCIMB 8052 5292692 YP_001308605.1 CDS Cbei_1471 NC_009617.1 1733667 1733975 D PFAM: helix-turn-helix, HxlR type; KEGG: cac:CAC0849 predicted transcriptional regulator; HxlR family transcriptional regulator 1733667..1733975 Clostridium beijerinckii NCIMB 8052 5292693 YP_001308606.1 CDS Cbei_1472 NC_009617.1 1734309 1734908 D KEGG: bce:BC1952 nitroreductase; nitroreductase 1734309..1734908 Clostridium beijerinckii NCIMB 8052 5292694 YP_001308607.1 CDS Cbei_1473 NC_009617.1 1736012 1737469 R KEGG: tte:TTE2242 transposase; transposase complement(1736012..1737469) Clostridium beijerinckii NCIMB 8052 5296343 YP_001308608.1 CDS Cbei_1474 NC_009617.1 1737852 1739210 R PFAM: branched-chain amino acid transport system II carrier protein; KEGG: sha:SH0145 hypothetical protein; branched-chain amino acid transport system II carrier protein complement(1737852..1739210) Clostridium beijerinckii NCIMB 8052 5292696 YP_001308609.1 CDS Cbei_1475 NC_009617.1 1739835 1740209 D PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: cac:CAC0383 PTS cellobiose-specific component IIA; PTS system lactose/cellobiose-specific transporter subunit IIA 1739835..1740209 Clostridium beijerinckii NCIMB 8052 5292697 YP_001308610.1 CDS Cbei_1476 NC_009617.1 1740279 1740584 D PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: cac:CAC0384 PTS system, cellobiose-specific component BII; phosphotransferase system, lactose/cellobiose-specific IIB subunit 1740279..1740584 Clostridium beijerinckii NCIMB 8052 5292698 YP_001308611.1 CDS Cbei_1477 NC_009617.1 1740626 1742035 D PFAM: glycoside hydrolase, family 1; KEGG: cac:CAC0385 beta-glucosidase; beta-glucosidase 1740626..1742035 Clostridium beijerinckii NCIMB 8052 5292699 YP_001308612.1 CDS Cbei_1478 NC_009617.1 1742164 1743492 D TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system, EIIC; KEGG: efa:EF0292 PTS system, IIC component; PTS system lactose/cellobiose family transporter subunit IIC 1742164..1743492 Clostridium beijerinckii NCIMB 8052 5292700 YP_001308613.1 CDS Cbei_1479 NC_009617.1 1743656 1744414 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bcl:ABC0711 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 1743656..1744414 Clostridium beijerinckii NCIMB 8052 5292701 YP_001308614.1 CDS Cbei_1480 NC_009617.1 1744554 1745297 R PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: dsy:DSY2527 hypothetical protein; LytTR family two component transcriptional regulator complement(1744554..1745297) Clostridium beijerinckii NCIMB 8052 5292702 YP_001308615.1 CDS Cbei_1481 NC_009617.1 1745315 1745716 R hypothetical protein complement(1745315..1745716) Clostridium beijerinckii NCIMB 8052 5292703 YP_001308616.1 CDS Cbei_1482 NC_009617.1 1745738 1746724 R PFAM: protein of unknown function DUF1432; KEGG: cth:Cthe_0858 protein of unknown function DUF1432; hypothetical protein complement(1745738..1746724) Clostridium beijerinckii NCIMB 8052 5292704 YP_001308617.1 CDS Cbei_1483 NC_009617.1 1746751 1747248 R PFAM: protein of unknown function DUF107; KEGG: cth:Cthe_0857 protein of unknown function DUF107; hypothetical protein complement(1746751..1747248) Clostridium beijerinckii NCIMB 8052 5292705 YP_001308618.1 CDS Cbei_1484 NC_009617.1 1747395 1748249 R PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: mta:Moth_1579 signal transduction histidine kinase regulating citrate/malate metabolism; signal transduction histidine kinase regulating citrate/malate metabolism complement(1747395..1748249) Clostridium beijerinckii NCIMB 8052 5292706 YP_001308619.1 CDS Cbei_1485 NC_009617.1 1748808 1750046 D PFAM: GCN5-related N-acetyltransferase; KEGG: lsa:LSA0806 N-acetyl transferase, GNAT family; N-acetyltransferase GCN5 1748808..1750046 Clostridium beijerinckii NCIMB 8052 5292707 YP_001308620.1 CDS Cbei_1486 NC_009617.1 1750387 1751343 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: bat:BAS2249 hypothetical protein; hypothetical protein complement(1750387..1751343) Clostridium beijerinckii NCIMB 8052 5292708 YP_001308621.1 CDS Cbei_1488 NC_009617.1 1752901 1756155 D PFAM: pentapeptide repeat protein; KEGG: ter:Tery_0271 pentapeptide repeat; pentapeptide repeat-containing protein 1752901..1756155 Clostridium beijerinckii NCIMB 8052 5296344 YP_001308622.1 CDS Cbei_1489 NC_009617.1 1756557 1757669 D KEGG: plu:plu4347 hypothetical protein; hypothetical protein 1756557..1757669 Clostridium beijerinckii NCIMB 8052 5292710 YP_001308623.1 CDS Cbei_1490 NC_009617.1 1757662 1761852 D KEGG: sao:SAOUHSC_01931 hypothetical protein; hypothetical protein 1757662..1761852 Clostridium beijerinckii NCIMB 8052 5292711 YP_001308624.1 CDS Cbei_1491 NC_009617.1 1761908 1763086 R PFAM: phage integrase family protein; KEGG: tte:TTE2127 integrase; phage integrase family protein complement(1761908..1763086) Clostridium beijerinckii NCIMB 8052 5292712 YP_001308625.1 CDS Cbei_1492 NC_009617.1 1763161 1763751 R PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator complement(1763161..1763751) Clostridium beijerinckii NCIMB 8052 5292713 YP_001308626.1 CDS Cbei_1493 NC_009617.1 1763956 1764741 D PFAM: cell wall binding repeat-containing protein; cell wall hydrolase/autolysin; KEGG: ava:Ava_4396 peptidoglycan-binding domain 1; cell wall hydrolase/autolysin 1763956..1764741 Clostridium beijerinckii NCIMB 8052 5292714 YP_001308627.1 CDS Cbei_1494 NC_009617.1 1765729 1766421 D KEGG: cpr:CPR_1247 hypothetical protein; hypothetical protein 1765729..1766421 Clostridium beijerinckii NCIMB 8052 5296345 YP_001308628.1 CDS Cbei_1495 NC_009617.1 1766447 1767448 D KEGG: cpr:CPR_1246 hypothetical protein; hypothetical protein 1766447..1767448 Clostridium beijerinckii NCIMB 8052 5292716 YP_001308629.1 CDS Cbei_1497 NC_009617.1 1769779 1770111 D PFAM: TfoX, N-terminal domain protein; KEGG: cac:CAC2476 uncharacterized protein, homolog of Spirochaeta aurantia (gi:152901); TfoX domain-containing protein 1769779..1770111 Clostridium beijerinckii NCIMB 8052 5296346 YP_001308630.1 CDS Cbei_1498 NC_009617.1 1770126 1770542 D KEGG: blo:BL0813 hypothetical protein; hypothetical protein 1770126..1770542 Clostridium beijerinckii NCIMB 8052 5292718 YP_001308631.1 CDS Cbei_1499 NC_009617.1 1770542 1770916 D KEGG: ljo:LJ1253 hypothetical protein; hypothetical protein 1770542..1770916 Clostridium beijerinckii NCIMB 8052 5292719 YP_001308632.1 CDS Cbei_1500 NC_009617.1 1771147 1771677 D PFAM: transcriptional regulator PadR family protein; KEGG: mmp:MMP0700 transcriptional regulator PadR-like family; PadR-like family transcriptional regulator 1771147..1771677 Clostridium beijerinckii NCIMB 8052 5292720 YP_001308633.1 CDS Cbei_1501 NC_009617.1 1771707 1773044 D KEGG: cac:CAC1997 predicted glycosyltransferase; related to UDP-glucuronosyltransferase; glycosyl transferase family protein 1771707..1773044 Clostridium beijerinckii NCIMB 8052 5292721 YP_001308634.1 CDS Cbei_1502 NC_009617.1 1773060 1773380 D PFAM: Carboxymuconolactone decarboxylase; KEGG: lmo:lmo0661 hypothetical protein; carboxymuconolactone decarboxylase 1773060..1773380 Clostridium beijerinckii NCIMB 8052 5292722 YP_001308635.1 CDS Cbei_1503 NC_009617.1 1774189 1774392 D hypothetical protein 1774189..1774392 Clostridium beijerinckii NCIMB 8052 5292723 YP_001308636.1 CDS Cbei_1504 NC_009617.1 1775004 1775801 D PFAM: protein of unknown function DUF124; KEGG: gka:GK2879 hypothetical protein; hypothetical protein 1775004..1775801 Clostridium beijerinckii NCIMB 8052 5292724 YP_001308637.1 CDS Cbei_1505 NC_009617.1 1776063 1777307 D PFAM: natural resistance-associated macrophage protein; KEGG: tte:TTE0686 Mn2+ and Fe2+ transporters of the NRAMP family; natural resistance-associated macrophage protein 1776063..1777307 Clostridium beijerinckii NCIMB 8052 5292725 YP_001308638.1 CDS Cbei_1506 NC_009617.1 1777662 1778645 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: cac:CAC1543 lactate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 1777662..1778645 Clostridium beijerinckii NCIMB 8052 5292726 YP_001308639.1 CDS Cbei_1507 NC_009617.1 1778738 1779352 D PFAM: manganese and iron superoxide dismutase; KEGG: efa:EF0463 superoxide dismutase, Mn; superoxide dismutase 1778738..1779352 Clostridium beijerinckii NCIMB 8052 5292727 YP_001308640.1 CDS Cbei_1508 NC_009617.1 1779445 1780545 R KEGG: cpf:CPF_2899 hypothetical protein; hypothetical protein complement(1779445..1780545) Clostridium beijerinckii NCIMB 8052 5292728 YP_001308641.1 CDS Cbei_1509 NC_009617.1 1780675 1781391 R PFAM: protein of unknown function DUF434; KEGG: cac:CAC1606 hypothetical protein; hypothetical protein complement(1780675..1781391) Clostridium beijerinckii NCIMB 8052 5292729 YP_001308642.1 CDS Cbei_1510 NC_009617.1 1781864 1783534 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(1781864..1783534) Clostridium beijerinckii NCIMB 8052 5292730 YP_001308643.1 CDS Cbei_1511 NC_009617.1 1783676 1784362 R PFAM: GntR family transcriptional regulator; GntR domain protein; KEGG: sph:MGAS10270_Spy1173 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(1783676..1784362) Clostridium beijerinckii NCIMB 8052 5292731 YP_001308644.1 CDS Cbei_1512 NC_009617.1 1785175 1786113 R PFAM: Auxin Efflux Carrier; KEGG: tte:TTE0420 predicted permease; auxin efflux carrier complement(1785175..1786113) Clostridium beijerinckii NCIMB 8052 5292732 YP_001308645.1 CDS Cbei_1513 NC_009617.1 1786179 1786859 R PFAM: GntR family transcriptional regulator; GntR domain protein; KEGG: bld:BLi00487 YdhC; GntR family transcriptional regulator complement(1786179..1786859) Clostridium beijerinckii NCIMB 8052 5292733 YP_001308646.1 CDS Cbei_1514 NC_009617.1 1787065 1787250 R KEGG: cth:Cthe_0921 hypothetical protein; hypothetical protein complement(1787065..1787250) Clostridium beijerinckii NCIMB 8052 5292734 YP_001308647.1 CDS Cbei_1515 NC_009617.1 1787711 1789753 D PFAM: protein of unknown function DUF255; KEGG: cth:Cthe_0291 protein of unknown function DUF255; hypothetical protein 1787711..1789753 Clostridium beijerinckii NCIMB 8052 5292735 YP_001308648.1 CDS Cbei_1516 NC_009617.1 1790009 1790734 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_0302 ABC transporter ATP-binding protein; ABC transporter 1790009..1790734 Clostridium beijerinckii NCIMB 8052 5292736 YP_001308649.1 CDS Cbei_1517 NC_009617.1 1790727 1792364 D KEGG: cpr:CPR_0298 uncharacterized membrane protein; hypothetical protein 1790727..1792364 Clostridium beijerinckii NCIMB 8052 5292737 YP_001308650.1 CDS Cbei_1518 NC_009617.1 1792567 1792764 D TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: fnu:FN1756 thiS protein; thiamine biosynthesis protein ThiS 1792567..1792764 Clostridium beijerinckii NCIMB 8052 5292738 YP_001308651.1 CDS thiG NC_009617.1 1792970 1793740 D functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 1792970..1793740 Clostridium beijerinckii NCIMB 8052 5292739 YP_001308652.1 CDS thiH NC_009617.1 1793751 1794911 D in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; thiamine biosynthesis protein ThiH 1793751..1794911 Clostridium beijerinckii NCIMB 8052 5292740 YP_001308653.1 CDS Cbei_1521 NC_009617.1 1795087 1795737 R PFAM: regulatory protein, TetR; KEGG: cac:CA_P0127 HTH transcriptional regulator TetR family; TetR family transcriptional regulator complement(1795087..1795737) Clostridium beijerinckii NCIMB 8052 5292741 YP_001308654.1 CDS Cbei_1522 NC_009617.1 1796024 1797547 D TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: chy:CHY_1864 drug resistance transporter EmrB/QacA family; EmrB/QacA family drug resistance transporter 1796024..1797547 Clostridium beijerinckii NCIMB 8052 5292742 YP_001308655.1 CDS Cbei_1523 NC_009617.1 1797706 1798170 D PFAM: CBS domain containing protein; KEGG: mth:MTH644 hypothetical protein; hypothetical protein 1797706..1798170 Clostridium beijerinckii NCIMB 8052 5292743 YP_001308656.1 CDS Cbei_1524 NC_009617.1 1798317 1799588 R PFAM: sodium:dicarboxylate symporter; KEGG: cpf:CPF_0756 proton/sodium-glutamate symporter; sodium:dicarboxylate symporter complement(1798317..1799588) Clostridium beijerinckii NCIMB 8052 5292744 YP_001308657.1 CDS Cbei_1525 NC_009617.1 1800639 1801253 D PFAM: protein of unknown function DUF1130; KEGG: cpr:CPR_1069 hypothetical protein; hypothetical protein 1800639..1801253 Clostridium beijerinckii NCIMB 8052 5292745 YP_001308658.1 CDS Cbei_1526 NC_009617.1 1801317 1801814 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: cno:NT01CX_1617 ErfK/YbiS/YcfS/YnhG family; ErfK/YbiS/YcfS/YnhG family protein 1801317..1801814 Clostridium beijerinckii NCIMB 8052 5292746 YP_001308659.1 CDS Cbei_1527 NC_009617.1 1802425 1803294 D PFAM: Radical SAM domain protein; KEGG: btl:BALH_4965 possible molybdenum cofactor biosynthesis enzyme; radical SAM domain-containing protein 1802425..1803294 Clostridium beijerinckii NCIMB 8052 5292747 YP_001308660.1 CDS Cbei_1528 NC_009617.1 1803311 1804045 D hypothetical protein 1803311..1804045 Clostridium beijerinckii NCIMB 8052 5292748 YP_001308661.1 CDS Cbei_1529 NC_009617.1 1804164 1804733 D KEGG: cpr:CPR_1916 hypothetical protein; hypothetical protein 1804164..1804733 Clostridium beijerinckii NCIMB 8052 5292749 YP_001308662.1 CDS ruvA NC_009617.1 1804938 1805534 D plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 1804938..1805534 Clostridium beijerinckii NCIMB 8052 5292750 YP_001308663.1 CDS ruvB NC_009617.1 1805600 1806643 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1805600..1806643 Clostridium beijerinckii NCIMB 8052 5292751 YP_001308664.1 CDS queA NC_009617.1 1806772 1807797 D Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1806772..1807797 Clostridium beijerinckii NCIMB 8052 5292752 YP_001308665.1 CDS tgt NC_009617.1 1807991 1809127 D Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1807991..1809127 Clostridium beijerinckii NCIMB 8052 5292753 YP_001308666.1 CDS yajC NC_009617.1 1809288 1809566 D member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 1809288..1809566 Clostridium beijerinckii NCIMB 8052 5292754 YP_001308667.1 CDS Cbei_1535 NC_009617.1 1809618 1809986 D KEGG: cac:CAC2280 predicted membrane protein; membrane protein 1809618..1809986 Clostridium beijerinckii NCIMB 8052 5292755 YP_001308668.1 CDS secD NC_009617.1 1810358 1811623 D part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1810358..1811623 Clostridium beijerinckii NCIMB 8052 5292756 YP_001308669.1 CDS secF NC_009617.1 1811616 1812491 D forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1811616..1812491 Clostridium beijerinckii NCIMB 8052 5292757 YP_001308670.1 CDS Cbei_1538 NC_009617.1 1812615 1813490 D PFAM: phosphoesterase, RecJ domain protein; KEGG: cpe:CPE1940 hypothetical protein; phosphoesterase domain-containing protein 1812615..1813490 Clostridium beijerinckii NCIMB 8052 5292758 YP_001308671.1 CDS Cbei_1539 NC_009617.1 1813581 1814099 D catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 1813581..1814099 Clostridium beijerinckii NCIMB 8052 5292759 YP_001308672.1 CDS Cbei_1540 NC_009617.1 1814444 1816660 D KEGG: cpf:CPF_2193 GTP pyrophosphokinase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase, HD region; (p)ppGpp synthetase I SpoT/RelA 1814444..1816660 Clostridium beijerinckii NCIMB 8052 5292760 YP_001308673.1 CDS Cbei_1541 NC_009617.1 1816692 1817141 D hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 1816692..1817141 Clostridium beijerinckii NCIMB 8052 5292761 YP_001308674.1 CDS Cbei_1542 NC_009617.1 1817154 1817750 D PFAM: beta-lactamase domain protein; KEGG: cpr:CPR_1902 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 1817154..1817750 Clostridium beijerinckii NCIMB 8052 5292762 YP_001308675.1 CDS Cbei_1543 NC_009617.1 1817796 1819223 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1817796..1819223 Clostridium beijerinckii NCIMB 8052 5292763 YP_001308676.1 CDS hisS NC_009617.1 1819283 1820536 D catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1819283..1820536 Clostridium beijerinckii NCIMB 8052 5292764 YP_001308677.1 CDS aspS NC_009617.1 1820568 1822367 D catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 1820568..1822367 Clostridium beijerinckii NCIMB 8052 5292765 YP_001308678.1 CDS Cbei_1546 NC_009617.1 1822502 1823209 R KEGG: cpf:CPF_2623 hypothetical protein; hypothetical protein complement(1822502..1823209) Clostridium beijerinckii NCIMB 8052 5292766 YP_001308679.1 CDS Cbei_1549 NC_009617.1 1823963 1824661 D PFAM: protein of unknown function DUF554; KEGG: dsy:DSY5050 hypothetical protein; hypothetical protein 1823963..1824661 Clostridium beijerinckii NCIMB 8052 5296348 YP_001308680.1 CDS Cbei_1550 NC_009617.1 1824720 1825325 D PFAM: protein of unknown function DUF975; KEGG: bce:BC5303 integral membrane protein; hypothetical protein 1824720..1825325 Clostridium beijerinckii NCIMB 8052 5292768 YP_001308681.1 CDS Cbei_1551 NC_009617.1 1825670 1826965 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1825670..1826965 Clostridium beijerinckii NCIMB 8052 5292769 YP_001308682.1 CDS Cbei_1552 NC_009617.1 1827233 1828579 D PFAM: domain of unknown function DUF1745; KEGG: ppd:Ppro_3141 domain of unknown function DUF1745; hypothetical protein 1827233..1828579 Clostridium beijerinckii NCIMB 8052 5292770 YP_001308683.1 CDS Cbei_1553 NC_009617.1 1828656 1830497 D TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; KEGG: cno:NT01CX_0224 sensory transduction histidine kinase; multi-sensor signal transduction histidine kinase 1828656..1830497 Clostridium beijerinckii NCIMB 8052 5292771 YP_001308684.1 CDS Cbei_1554 NC_009617.1 1831095 1832711 D KEGG: ctc:CTC00795 conserved protein (pathogens); hypothetical protein 1831095..1832711 Clostridium beijerinckii NCIMB 8052 5292772 YP_001308685.1 CDS Cbei_1555 NC_009617.1 1832877 1833032 D KEGG: cno:NT01CX_0353 hypothetical protein; hypothetical protein 1832877..1833032 Clostridium beijerinckii NCIMB 8052 5292773 YP_001308686.1 CDS Cbei_1556 NC_009617.1 1833149 1833301 R KEGG: cpr:CPR_0425 hypothetical protein; hypothetical protein complement(1833149..1833301) Clostridium beijerinckii NCIMB 8052 5292774 YP_001308687.1 CDS Cbei_1557 NC_009617.1 1833534 1834013 R PFAM: transcription factor CarD; KEGG: bca:BCE_4857 transcriptional regulator, CarD family; CarD family transcriptional regulator complement(1833534..1834013) Clostridium beijerinckii NCIMB 8052 5292775 YP_001308688.1 CDS Cbei_1558 NC_009617.1 1834368 1835180 D hypothetical protein 1834368..1835180 Clostridium beijerinckii NCIMB 8052 5292776 YP_001308689.1 CDS Cbei_1559 NC_009617.1 1835368 1835988 D functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 1835368..1835988 Clostridium beijerinckii NCIMB 8052 5292777 YP_001308690.1 CDS Cbei_1560 NC_009617.1 1836113 1836778 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cth:Cthe_0780 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase 1836113..1836778 Clostridium beijerinckii NCIMB 8052 5292778 YP_001308691.1 CDS Cbei_1561 NC_009617.1 1836811 1837425 D KEGG: cpf:CPF_1786 hypothetical protein; hypothetical protein 1836811..1837425 Clostridium beijerinckii NCIMB 8052 5292779 YP_001308692.1 CDS Cbei_1562 NC_009617.1 1837552 1838772 R catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase complement(1837552..1838772) Clostridium beijerinckii NCIMB 8052 5292780 YP_001308693.1 CDS Cbei_1563 NC_009617.1 1839105 1839527 R KEGG: ctc:CTC00602 hypothetical protein; hypothetical protein complement(1839105..1839527) Clostridium beijerinckii NCIMB 8052 5292781 YP_001308694.1 CDS Cbei_1564 NC_009617.1 1839850 1841406 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpr:CPR_0136 ATPase component of ABC transporter (two ATPase domains); ABC transporter complement(1839850..1841406) Clostridium beijerinckii NCIMB 8052 5292782 YP_001308695.1 CDS Cbei_1565 NC_009617.1 1841872 1842423 D PFAM: GCN5-related N-acetyltransferase; KEGG: pgi:PG1358 acetyltransferase, GNAT family; N-acetyltransferase GCN5 1841872..1842423 Clostridium beijerinckii NCIMB 8052 5292783 YP_001308696.1 CDS Cbei_1566 NC_009617.1 1842718 1842900 D hypothetical protein 1842718..1842900 Clostridium beijerinckii NCIMB 8052 5292784 YP_001308697.1 CDS Cbei_1567 NC_009617.1 1843006 1843710 R KEGG: cpr:CPR_1860 hypothetical protein; hypothetical protein complement(1843006..1843710) Clostridium beijerinckii NCIMB 8052 5292785 YP_001308698.1 CDS Cbei_1568 NC_009617.1 1843936 1844835 D PFAM: Sporulation protein YtxC; KEGG: cpe:CPE1895 hypothetical protein; sporulation protein YtxC 1843936..1844835 Clostridium beijerinckii NCIMB 8052 5292786 YP_001308699.1 CDS Cbei_1569 NC_009617.1 1844970 1845527 D TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: cpf:CPF_2146 translation initiation factor IF-3; translation initiation factor IF-3 1844970..1845527 Clostridium beijerinckii NCIMB 8052 5292787 YP_001308700.1 CDS rpmI NC_009617.1 1845548 1845745 D PFAM: ribosomal protein L35; KEGG: cno:NT01CX_1762 ribosomal protein L35; 50S ribosomal protein L35 1845548..1845745 Clostridium beijerinckii NCIMB 8052 5292788 YP_001308701.1 CDS rplT NC_009617.1 1845774 1846133 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1845774..1846133 Clostridium beijerinckii NCIMB 8052 5292789 YP_001308702.1 CDS Cbei_1572 NC_009617.1 1846234 1847016 D PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; KEGG: cpf:CPF_2141 RNA methyltransferase, TrmH family; tRNA/rRNA methyltransferase SpoU 1846234..1847016 Clostridium beijerinckii NCIMB 8052 5292790 YP_001308703.1 CDS pheS NC_009617.1 1847717 1848736 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1847717..1848736 Clostridium beijerinckii NCIMB 8052 5292791 YP_001308704.1 CDS pheT NC_009617.1 1848951 1851329 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1848951..1851329 Clostridium beijerinckii NCIMB 8052 5292792 YP_001308705.1 CDS Cbei_1575 NC_009617.1 1851547 1851975 D MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 1851547..1851975 Clostridium beijerinckii NCIMB 8052 5292793 YP_001308706.1 CDS mraW NC_009617.1 1851988 1852920 D TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: cpr:CPR_1833 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 1851988..1852920 Clostridium beijerinckii NCIMB 8052 5292794 YP_001308707.1 CDS Cbei_1577 NC_009617.1 1852938 1853468 D KEGG: ctc:CTC01634 hypothetical protein; hypothetical protein 1852938..1853468 Clostridium beijerinckii NCIMB 8052 5292795 YP_001308708.1 CDS Cbei_1578 NC_009617.1 1853613 1855841 D TIGRFAM: stage V sporulation protein D; PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PASTA domain containing protein; KEGG: ctc:CTC01633 stage V sporulation protein D; stage V sporulation protein D 1853613..1855841 Clostridium beijerinckii NCIMB 8052 5292796 YP_001308709.1 CDS Cbei_1579 NC_009617.1 1856073 1858337 D TIGRFAM: stage V sporulation protein D; PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PASTA domain containing protein; KEGG: ctc:CTC01633 stage V sporulation protein D; stage V sporulation protein D 1856073..1858337 Clostridium beijerinckii NCIMB 8052 5292797 YP_001308710.1 CDS murE NC_009617.1 1858635 1860095 D involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1858635..1860095 Clostridium beijerinckii NCIMB 8052 5292798 YP_001308711.1 CDS Cbei_1581 NC_009617.1 1860192 1861544 D TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; KEGG: cpf:CPF_2115 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 1860192..1861544 Clostridium beijerinckii NCIMB 8052 5292799 YP_001308712.1 CDS mraY NC_009617.1 1861648 1862628 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1861648..1862628 Clostridium beijerinckii NCIMB 8052 5292800 YP_001308713.1 CDS Cbei_1583 NC_009617.1 1862658 1863794 D TIGRFAM: cell division protein FtsW; stage V sporulation protein E; PFAM: cell cycle protein; KEGG: cpf:CPF_2113 stage V sporulation protein E; stage V sporulation protein E 1862658..1863794 Clostridium beijerinckii NCIMB 8052 5292801 YP_001308714.1 CDS Cbei_1584 NC_009617.1 1863985 1864746 D PFAM: Polypeptide-transport-associated domain protein, FtsQ-type; KEGG: cpf:CPF_2112 cell division protein FtsQ; polypeptide-transport-associated domain-containing protein 1863985..1864746 Clostridium beijerinckii NCIMB 8052 5292802 YP_001308715.1 CDS Cbei_1585 NC_009617.1 1864754 1865482 D PFAM: protein of unknown function DUF881; KEGG: cpr:CPR_1825 hypothetical protein; hypothetical protein 1864754..1865482 Clostridium beijerinckii NCIMB 8052 5292803 YP_001308716.1 CDS Cbei_1586 NC_009617.1 1865495 1865887 D PFAM: protein of unknown function DUF1290; KEGG: ctc:CTC01626 small basic protein; hypothetical protein 1865495..1865887 Clostridium beijerinckii NCIMB 8052 5292804 YP_001308717.1 CDS Cbei_1587 NC_009617.1 1865900 1866634 D PFAM: protein of unknown function DUF881; KEGG: cpf:CPF_2109 hypothetical protein; hypothetical protein 1865900..1866634 Clostridium beijerinckii NCIMB 8052 5292805 YP_001308718.1 CDS Cbei_1588 NC_009617.1 1866727 1867407 D PFAM: alanine racemase domain protein; KEGG: cpf:CPF_2108 conserved hypothetical protein TIGR00044; alanine racemase domain-containing protein 1866727..1867407 Clostridium beijerinckii NCIMB 8052 5292806 YP_001308719.1 CDS Cbei_1589 NC_009617.1 1867400 1867852 D PFAM: protein of unknown function DUF552; KEGG: cpr:CPR_1821 hypothetical protein; hypothetical protein 1867400..1867852 Clostridium beijerinckii NCIMB 8052 5292807 YP_001308720.1 CDS Cbei_1590 NC_009617.1 1867865 1868119 D PFAM: protein of unknown function YGGT; KEGG: dsy:DSY2886 hypothetical protein; hypothetical protein 1867865..1868119 Clostridium beijerinckii NCIMB 8052 5292808 YP_001308721.1 CDS Cbei_1591 NC_009617.1 1868123 1868887 D PFAM: RNA-binding S4 domain protein; KEGG: cpf:CPF_2106 S4 domain protein; RNA-binding S4 domain-containing protein 1868123..1868887 Clostridium beijerinckii NCIMB 8052 5292809 YP_001308722.1 CDS Cbei_1592 NC_009617.1 1868901 1869536 D PFAM: DivIVA family protein; KEGG: cpr:CPR_1819 cell division protein DivIVA; DivIVA family protein 1868901..1869536 Clostridium beijerinckii NCIMB 8052 5292810 YP_001308723.1 CDS Cbei_1593 NC_009617.1 1869981 1870736 R PFAM: OmpA/MotB domain protein; KEGG: cac:CAC0305 chemotaxis motility protein B, gene motB; OmpA/MotB domain-containing protein complement(1869981..1870736) Clostridium beijerinckii NCIMB 8052 5292811 YP_001308724.1 CDS Cbei_1594 NC_009617.1 1870749 1871522 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: cac:CAC0304 chemotaxis motility protein A, gene motA; MotA/TolQ/ExbB proton channel complement(1870749..1871522) Clostridium beijerinckii NCIMB 8052 5292812 YP_001308725.1 CDS Cbei_1595 NC_009617.1 1871817 1872734 D TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cac:CAC2114 predicted pseudouridylate synthase, YlyB B.subtilis ortholog; RluA family pseudouridine synthase 1871817..1872734 Clostridium beijerinckii NCIMB 8052 5292813 YP_001308726.1 CDS Cbei_1596 NC_009617.1 1872752 1873288 D regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 1872752..1873288 Clostridium beijerinckii NCIMB 8052 5292814 YP_001308727.1 CDS Cbei_1597 NC_009617.1 1873312 1874472 D PFAM: RNA methylase; KEGG: cpf:CPF_2102 methyltransferase; RNA methylase 1873312..1874472 Clostridium beijerinckii NCIMB 8052 5292815 YP_001308728.1 CDS Cbei_1598 NC_009617.1 1874836 1875681 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bha:BH2940 hypothetical protein; RpiR family transcriptional regulator 1874836..1875681 Clostridium beijerinckii NCIMB 8052 5292816 YP_001308729.1 CDS Cbei_1599 NC_009617.1 1875754 1877487 R PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; KEGG: cpe:CPE1847 probable fibronectin-binding protein; fibronectin-binding A domain-containing protein complement(1875754..1877487) Clostridium beijerinckii NCIMB 8052 5292817 YP_001308730.1 CDS dapF NC_009617.1 1877917 1878744 D involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 1877917..1878744 Clostridium beijerinckii NCIMB 8052 5292818 YP_001308731.1 CDS Cbei_1601 NC_009617.1 1878771 1879778 D KEGG: ctc:CTC01605 hypothetical protein; hypothetical protein 1878771..1879778 Clostridium beijerinckii NCIMB 8052 5292819 YP_001308732.1 CDS Cbei_1602 NC_009617.1 1880025 1880447 D PFAM: GCN5-related N-acetyltransferase; KEGG: mba:Mbar_A3488 hypothetical protein; N-acetyltransferase GCN5 1880025..1880447 Clostridium beijerinckii NCIMB 8052 5292820 YP_001308733.1 CDS Cbei_1603 NC_009617.1 1880539 1880760 D hypothetical protein 1880539..1880760 Clostridium beijerinckii NCIMB 8052 5292821 YP_001308734.1 CDS Cbei_1604 NC_009617.1 1880968 1881660 D KEGG: cpf:CPF_2098 pilus biogenesis protein; pilus biogenesis protein 1880968..1881660 Clostridium beijerinckii NCIMB 8052 5292822 YP_001308735.1 CDS Cbei_1605 NC_009617.1 1881634 1883355 R PFAM: Resolvase, N-terminal domain; Recombinase; KEGG: cac:CAC1951 site-specific recombinases, DNA invertase Pin homolog; resolvase domain-containing protein complement(1881634..1883355) Clostridium beijerinckii NCIMB 8052 5292823 YP_001308736.1 CDS Cbei_1606 NC_009617.1 1883821 1888413 D PFAM: Fibronectin, type III domain protein; Haemagluttinin repeat-containing protein; KEGG: cth:Cthe_1235 cellulose 1,4-beta-cellobiosidase; fibronectin type III domain-containing protein 1883821..1888413 Clostridium beijerinckii NCIMB 8052 5292824 YP_001308737.1 CDS Cbei_1607 NC_009617.1 1888646 1888879 D KEGG: cac:CA_P0101 hypothetical protein; hypothetical protein 1888646..1888879 Clostridium beijerinckii NCIMB 8052 5292825 YP_001308738.1 CDS Cbei_1608 NC_009617.1 1890001 1891098 D hypothetical protein 1890001..1891098 Clostridium beijerinckii NCIMB 8052 5292826 YP_001308739.1 CDS Cbei_1609 NC_009617.1 1891159 1891815 D hypothetical protein 1891159..1891815 Clostridium beijerinckii NCIMB 8052 5292827 YP_001308740.1 CDS Cbei_1610 NC_009617.1 1891860 1892312 D KEGG: vvy:VV1763 hypothetical protein; hypothetical protein 1891860..1892312 Clostridium beijerinckii NCIMB 8052 5292828 YP_001308741.1 CDS Cbei_1611 NC_009617.1 1892424 1893707 D PFAM: Ion transport 2 domain protein; KEGG: hch:HCH_00361 uncharacterized low-complexity protein; Ion transport 2 domain-containing protein 1892424..1893707 Clostridium beijerinckii NCIMB 8052 5292829 YP_001308742.1 CDS Cbei_1612 NC_009617.1 1893890 1896151 D PFAM: SEC-C motif domain protein; KEGG: ehi:112.t00003 hypothetical protein Pfam: Prefoldin_2 U3_assoc_6 PROSITE: ASN_RICH GLU_RICH LYS_RICH; SecC motif-containing protein 1893890..1896151 Clostridium beijerinckii NCIMB 8052 5292830 YP_001308743.1 CDS Cbei_1613 NC_009617.1 1896306 1897697 D KEGG: psb:Psyr_1263 ATPas; hypothetical protein 1896306..1897697 Clostridium beijerinckii NCIMB 8052 5292831 YP_001308744.1 CDS Cbei_1614 NC_009617.1 1897887 1901114 D KEGG: mma:MM2421 chaperone protein; hypothetical protein 1897887..1901114 Clostridium beijerinckii NCIMB 8052 5292832 YP_001308745.1 CDS Cbei_1615 NC_009617.1 1901502 1901873 R PFAM: helix-turn-helix domain protein; KEGG: gka:GK0493 transcriptional regulator; helix-turn-helix domain-containing protein complement(1901502..1901873) Clostridium beijerinckii NCIMB 8052 5292833 YP_001308746.1 CDS Cbei_1616 NC_009617.1 1902010 1902237 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 1902010..1902237 Clostridium beijerinckii NCIMB 8052 5292834 YP_001308747.1 CDS Cbei_1617 NC_009617.1 1902390 1902899 D KEGG: cpf:CPF_1602 hypothetical protein; hypothetical protein 1902390..1902899 Clostridium beijerinckii NCIMB 8052 5292835 YP_001308748.1 CDS Cbei_1618 NC_009617.1 1903072 1903413 D hypothetical protein 1903072..1903413 Clostridium beijerinckii NCIMB 8052 5292836 YP_001308749.1 CDS Cbei_1619 NC_009617.1 1903394 1905385 D KEGG: gfo:orf2459 hypothetical protein; hypothetical protein 1903394..1905385 Clostridium beijerinckii NCIMB 8052 5292837 YP_001308750.1 CDS Cbei_1620 NC_009617.1 1905439 1905855 D hypothetical protein 1905439..1905855 Clostridium beijerinckii NCIMB 8052 5292838 YP_001308751.1 CDS Cbei_1621 NC_009617.1 1905855 1906775 D PFAM: RecT protein; KEGG: sau:SA1794 hypothetical protein; RecT protein 1905855..1906775 Clostridium beijerinckii NCIMB 8052 5292839 YP_001308752.1 CDS Cbei_1622 NC_009617.1 1906775 1907482 D PFAM: beta-lactamase domain protein; KEGG: lin:lin1754 hypothetical protein; beta-lactamase domain-containing protein 1906775..1907482 Clostridium beijerinckii NCIMB 8052 5292840 YP_001308753.1 CDS Cbei_1623 NC_009617.1 1907510 1908370 D TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: lin:lin1753 hypothetical protein; primosome subunit DnaD 1907510..1908370 Clostridium beijerinckii NCIMB 8052 5292841 YP_001308754.1 CDS Cbei_1624 NC_009617.1 1908363 1909130 D KEGG: cno:NT01CX_2185 hypothetical protein; hypothetical protein 1908363..1909130 Clostridium beijerinckii NCIMB 8052 5292842 YP_001308755.1 CDS Cbei_1625 NC_009617.1 1909288 1909500 D hypothetical protein 1909288..1909500 Clostridium beijerinckii NCIMB 8052 5292843 YP_001308756.1 CDS Cbei_1626 NC_009617.1 1909516 1909944 D PFAM: protein of unknown function DUF1064; KEGG: ctc:CTC01079 hypothetical protein; hypothetical protein 1909516..1909944 Clostridium beijerinckii NCIMB 8052 5292844 YP_001308757.1 CDS Cbei_1627 NC_009617.1 1909948 1910592 D KEGG: ctc:CTC01080 hypothetical protein; hypothetical protein 1909948..1910592 Clostridium beijerinckii NCIMB 8052 5292845 YP_001308758.1 CDS Cbei_1628 NC_009617.1 1910669 1910836 D hypothetical protein 1910669..1910836 Clostridium beijerinckii NCIMB 8052 5292846 YP_001308759.1 CDS Cbei_1629 NC_009617.1 1910951 1911472 D KEGG: ctc:CTC02136 hypothetical protein; hypothetical protein 1910951..1911472 Clostridium beijerinckii NCIMB 8052 5292847 YP_001308760.1 CDS Cbei_1630 NC_009617.1 1911552 1912736 D KEGG: dps:DP1578 hypothetical protein; hypothetical protein 1911552..1912736 Clostridium beijerinckii NCIMB 8052 5292848 YP_001308761.1 CDS Cbei_1631 NC_009617.1 1912911 1913603 D hypothetical protein 1912911..1913603 Clostridium beijerinckii NCIMB 8052 5292849 YP_001308762.1 CDS Cbei_1632 NC_009617.1 1913872 1915104 D PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; KEGG: spj:MGAS2096_Spy0574 chromosome partitioning protein ParB / adenine-specific methyltransferase; DNA methylase N-4/N-6 domain-containing protein 1913872..1915104 Clostridium beijerinckii NCIMB 8052 5292850 YP_001308763.1 CDS Cbei_1633 NC_009617.1 1915185 1915496 D KEGG: cth:Cthe_1725 hypothetical protein; hypothetical protein 1915185..1915496 Clostridium beijerinckii NCIMB 8052 5292851 YP_001308764.1 CDS Cbei_1634 NC_009617.1 1915557 1915940 D KEGG: bha:BH3534 hypothetical protein; hypothetical protein 1915557..1915940 Clostridium beijerinckii NCIMB 8052 5292852 YP_001308765.1 CDS Cbei_1635 NC_009617.1 1915963 1916745 D KEGG: bsu:BG11270 similar to phage-related terminase small subunit; phage-related terminase small subunit-like protein 1915963..1916745 Clostridium beijerinckii NCIMB 8052 5292853 YP_001308766.1 CDS Cbei_1636 NC_009617.1 1916738 1918150 D KEGG: rru:Rru_A2590 hypothetical protein; hypothetical protein 1916738..1918150 Clostridium beijerinckii NCIMB 8052 5292854 YP_001308767.1 CDS Cbei_1637 NC_009617.1 1918141 1919640 D hypothetical protein 1918141..1919640 Clostridium beijerinckii NCIMB 8052 5292855 YP_001308768.1 CDS Cbei_1638 NC_009617.1 1919633 1920643 D KEGG: gfo:orf2413 hypothetical protein; hypothetical protein 1919633..1920643 Clostridium beijerinckii NCIMB 8052 5292856 YP_001308769.1 CDS Cbei_1639 NC_009617.1 1920769 1922163 D hypothetical protein 1920769..1922163 Clostridium beijerinckii NCIMB 8052 5292857 YP_001308770.1 CDS Cbei_1640 NC_009617.1 1922182 1922559 D hypothetical protein 1922182..1922559 Clostridium beijerinckii NCIMB 8052 5292858 YP_001308771.1 CDS Cbei_1641 NC_009617.1 1922585 1923622 D hypothetical protein 1922585..1923622 Clostridium beijerinckii NCIMB 8052 5292859 YP_001308772.1 CDS Cbei_1642 NC_009617.1 1923650 1923982 D hypothetical protein 1923650..1923982 Clostridium beijerinckii NCIMB 8052 5292860 YP_001308773.1 CDS Cbei_1643 NC_009617.1 1924201 1924356 D hypothetical protein 1924201..1924356 Clostridium beijerinckii NCIMB 8052 5292861 YP_001308774.1 CDS Cbei_1644 NC_009617.1 1924370 1924774 D hypothetical protein 1924370..1924774 Clostridium beijerinckii NCIMB 8052 5292862 YP_001308775.1 CDS Cbei_1645 NC_009617.1 1924782 1925612 D hypothetical protein 1924782..1925612 Clostridium beijerinckii NCIMB 8052 5292863 YP_001308776.1 CDS Cbei_1646 NC_009617.1 1925618 1925941 D hypothetical protein 1925618..1925941 Clostridium beijerinckii NCIMB 8052 5292864 YP_001308777.1 CDS Cbei_1647 NC_009617.1 1925941 1927383 D KEGG: dsy:DSY3957 hypothetical protein; hypothetical protein 1925941..1927383 Clostridium beijerinckii NCIMB 8052 5292865 YP_001308778.1 CDS Cbei_1648 NC_009617.1 1927403 1927819 D KEGG: ctc:CTC02124 phage-like element pbsx protein XkdM; hypothetical protein 1927403..1927819 Clostridium beijerinckii NCIMB 8052 5292866 YP_001308779.1 CDS Cbei_1649 NC_009617.1 1927891 1928322 D PFAM: Phage XkdN-like protein; Phage XkdN-like protein 1927891..1928322 Clostridium beijerinckii NCIMB 8052 5292867 YP_001308780.1 CDS Cbei_1650 NC_009617.1 1928495 1932220 D TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: gka:GK0539 bacteriophage-related protein; TP901 family phage tail tape measure protein 1928495..1932220 Clostridium beijerinckii NCIMB 8052 5292868 YP_001308781.1 CDS Cbei_1651 NC_009617.1 1932641 1933459 D hypothetical protein 1932641..1933459 Clostridium beijerinckii NCIMB 8052 5292869 YP_001308782.1 CDS Cbei_1652 NC_009617.1 1933556 1934242 D PFAM: SH3, type 3 domain protein; SMART: SH3 domain protein domain protein; KEGG: lin:lin1283 hypothetical protein; SH3 type 3 domain-containing protein 1933556..1934242 Clostridium beijerinckii NCIMB 8052 5292870 YP_001308783.1 CDS Cbei_1653 NC_009617.1 1934247 1935263 D KEGG: bld:BLi01343 YqbQ; hypothetical protein 1934247..1935263 Clostridium beijerinckii NCIMB 8052 5292871 YP_001308784.1 CDS Cbei_1654 NC_009617.1 1935256 1935603 D hypothetical protein 1935256..1935603 Clostridium beijerinckii NCIMB 8052 5292872 YP_001308785.1 CDS Cbei_1655 NC_009617.1 1935596 1936036 D KEGG: lin:lin1286 hypothetical protein; hypothetical protein 1935596..1936036 Clostridium beijerinckii NCIMB 8052 5292873 YP_001308786.1 CDS Cbei_1656 NC_009617.1 1936041 1937144 D PFAM: Baseplate J family protein; KEGG: ctc:CTC02115 phage-like element pbsx protein XkdT; baseplate J family protein 1936041..1937144 Clostridium beijerinckii NCIMB 8052 5292874 YP_001308787.1 CDS Cbei_1657 NC_009617.1 1937145 1939004 D KEGG: ctc:CTC02114 hypothetical protein; hypothetical protein 1937145..1939004 Clostridium beijerinckii NCIMB 8052 5292875 YP_001308788.1 CDS Cbei_1658 NC_009617.1 1939006 1939620 D KEGG: ctc:CTC02112 phage-like element pbsx protein XkdT; phage-like element pbsx protein XkdT 1939006..1939620 Clostridium beijerinckii NCIMB 8052 5292876 YP_001308789.1 CDS Cbei_1659 NC_009617.1 1939634 1940779 D hypothetical protein 1939634..1940779 Clostridium beijerinckii NCIMB 8052 5292877 YP_001308790.1 CDS Cbei_1660 NC_009617.1 1940807 1941079 D hypothetical protein 1940807..1941079 Clostridium beijerinckii NCIMB 8052 5292878 YP_001308791.1 CDS Cbei_1661 NC_009617.1 1941072 1941287 D hypothetical protein 1941072..1941287 Clostridium beijerinckii NCIMB 8052 5292879 YP_001308792.1 CDS Cbei_1662 NC_009617.1 1941547 1942719 D TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; Ig domain protein, group 2 domain protein; KEGG: cac:CAC2107 contains cell adhesion domain; hypothetical protein 1941547..1942719 Clostridium beijerinckii NCIMB 8052 5292880 YP_001308793.1 CDS Cbei_1663 NC_009617.1 1942761 1943831 D PFAM: Ig domain protein, group 2 domain protein; KEGG: cac:CAC2107 contains cell adhesion domain; Ig domain-containing protein 1942761..1943831 Clostridium beijerinckii NCIMB 8052 5292881 YP_001308794.1 CDS Cbei_1664 NC_009617.1 1943912 1944148 D KEGG: cpr:CPR_C0053 hypothetical protein; hypothetical protein 1943912..1944148 Clostridium beijerinckii NCIMB 8052 5292882 YP_001308795.1 CDS Cbei_1665 NC_009617.1 1944164 1944604 D KEGG: cpf:CPF_0972 hypothetical protein; hypothetical protein 1944164..1944604 Clostridium beijerinckii NCIMB 8052 5292883 YP_001308796.1 CDS Cbei_1666 NC_009617.1 1944668 1945453 D PFAM: glycoside hydrolase, family 25; KEGG: cpr:CPR_C0050 autolytic lysozyme; glycoside hydrolase 1944668..1945453 Clostridium beijerinckii NCIMB 8052 5292884 YP_001308797.1 CDS Cbei_1667 NC_009617.1 1945571 1946410 D PFAM: extracellular solute-binding protein, family 3; KEGG: bja:blr2224 ABC transporter amino acid-binding protein; extracellular solute-binding protein 1945571..1946410 Clostridium beijerinckii NCIMB 8052 5292885 YP_001308798.1 CDS Cbei_1668 NC_009617.1 1946658 1947701 R KEGG: cpr:CPR_1341 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein complement(1946658..1947701) Clostridium beijerinckii NCIMB 8052 5292886 YP_001308799.1 CDS Cbei_1669 NC_009617.1 1947754 1948122 R hypothetical protein complement(1947754..1948122) Clostridium beijerinckii NCIMB 8052 5292887 YP_001308800.1 CDS Cbei_1670 NC_009617.1 1948640 1949524 D KEGG: ctc:CTC01990 transposase; hypothetical protein 1948640..1949524 Clostridium beijerinckii NCIMB 8052 5292888 YP_001308801.1 CDS Cbei_1672 NC_009617.1 1950460 1950663 D hypothetical protein 1950460..1950663 Clostridium beijerinckii NCIMB 8052 5296349 YP_001308802.1 CDS Cbei_1673 NC_009617.1 1950885 1951034 D hypothetical protein 1950885..1951034 Clostridium beijerinckii NCIMB 8052 5292890 YP_001308803.1 CDS Cbei_1674 NC_009617.1 1951993 1952406 D KEGG: cac:CAC1318 hypothetical protein; hypothetical protein 1951993..1952406 Clostridium beijerinckii NCIMB 8052 5292891 YP_001308804.1 CDS Cbei_1675 NC_009617.1 1953040 1953489 D PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_0357 choline binding protein F; cell wall binding repeat-containing protein 1953040..1953489 Clostridium beijerinckii NCIMB 8052 5292892 YP_001308805.1 CDS Cbei_1676 NC_009617.1 1953652 1954599 D PFAM: beta-lactamase domain protein; KEGG: ctc:CTC01364 hypothetical membrane spanning protein; beta-lactamase domain-containing protein 1953652..1954599 Clostridium beijerinckii NCIMB 8052 5292893 YP_001308806.1 CDS Cbei_1677 NC_009617.1 1954992 1955183 D hypothetical protein 1954992..1955183 Clostridium beijerinckii NCIMB 8052 5292894 YP_001308807.1 CDS Cbei_1678 NC_009617.1 1955372 1955599 D XRE family transcriptional regulator 1955372..1955599 Clostridium beijerinckii NCIMB 8052 5292895 YP_001308808.1 CDS Cbei_1679 NC_009617.1 1955849 1956526 D PFAM: MgtC/SapB transporter; KEGG: cac:CAC3658 uncharacterized conserved membrane protein, SapB/MtgC family; MgtC/SapB transporter 1955849..1956526 Clostridium beijerinckii NCIMB 8052 5292896 YP_001308809.1 CDS Cbei_1680 NC_009617.1 1956874 1957275 D hypothetical protein 1956874..1957275 Clostridium beijerinckii NCIMB 8052 5292897 YP_001308810.1 CDS Cbei_1682 NC_009617.1 1958399 1959514 D PFAM: type II secretion system protein; KEGG: aae:aq_747 fimbrial assembly protein PilC; type II secretion system protein 1958399..1959514 Clostridium beijerinckii NCIMB 8052 5296350 YP_001308811.1 CDS Cbei_1683 NC_009617.1 1959511 1959957 D hypothetical protein 1959511..1959957 Clostridium beijerinckii NCIMB 8052 5292899 YP_001308812.1 CDS Cbei_1684 NC_009617.1 1959954 1960379 D hypothetical protein 1959954..1960379 Clostridium beijerinckii NCIMB 8052 5292900 YP_001308813.1 CDS Cbei_1685 NC_009617.1 1960369 1960833 D KEGG: cac:CAC2100 hypothetical protein; hypothetical protein 1960369..1960833 Clostridium beijerinckii NCIMB 8052 5292901 YP_001308814.1 CDS Cbei_1686 NC_009617.1 1960863 1961246 D hypothetical protein 1960863..1961246 Clostridium beijerinckii NCIMB 8052 5292902 YP_001308815.1 CDS Cbei_1687 NC_009617.1 1961311 1961976 D hypothetical protein 1961311..1961976 Clostridium beijerinckii NCIMB 8052 5292903 YP_001308816.1 CDS Cbei_1688 NC_009617.1 1961987 1962337 D hypothetical protein 1961987..1962337 Clostridium beijerinckii NCIMB 8052 5292904 YP_001308817.1 CDS Cbei_1689 NC_009617.1 1962330 1962698 D hypothetical protein 1962330..1962698 Clostridium beijerinckii NCIMB 8052 5292905 YP_001308818.1 CDS Cbei_1690 NC_009617.1 1962989 1963579 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 1962989..1963579 Clostridium beijerinckii NCIMB 8052 5292906 YP_001308819.1 CDS Cbei_1691 NC_009617.1 1963670 1964035 D KEGG: cpf:CPF_2088 hypothetical protein; hypothetical protein 1963670..1964035 Clostridium beijerinckii NCIMB 8052 5292907 YP_001308820.1 CDS Cbei_1692 NC_009617.1 1964190 1965110 D TIGRFAM: Sporulation stage III, protein AA; SMART: ATPase AAA; KEGG: cpr:CPR_1801 stage III sporulation protein AA; sporulation stage III, protein AA 1964190..1965110 Clostridium beijerinckii NCIMB 8052 5292908 YP_001308821.1 CDS Cbei_1693 NC_009617.1 1965098 1965616 D necessary for complete engulfment of forespore; stage III sporulation protein SpoAB 1965098..1965616 Clostridium beijerinckii NCIMB 8052 5292909 YP_001308822.1 CDS Cbei_1694 NC_009617.1 1965681 1965878 D PFAM: Stage III sporulation AC family protein; KEGG: cac:CAC2091 stage III sporulation protein AC, SpoIIIAC; stage III sporulation AC family protein 1965681..1965878 Clostridium beijerinckii NCIMB 8052 5292910 YP_001308823.1 CDS Cbei_1695 NC_009617.1 1965890 1966273 D TIGRFAM: Sporulation stage III, protein AD; KEGG: cno:NT01CX_1972 stage III sporulation protein AD, SpoIIIAD; sporulation stage III, protein AD 1965890..1966273 Clostridium beijerinckii NCIMB 8052 5292911 YP_001308824.1 CDS Cbei_1696 NC_009617.1 1966284 1967573 D TIGRFAM: Sporulation stage III, protein AE; KEGG: cpf:CPF_2083 stage III sporulation protein AE; sporulation stage III, protein AE 1966284..1967573 Clostridium beijerinckii NCIMB 8052 5292912 YP_001308825.1 CDS Cbei_1697 NC_009617.1 1967580 1968179 D TIGRFAM: Sporulation stage III, protein AF; KEGG: cac:CAC2088 stage III sporulation protein AF, SpoIIIAF; sporulation stage III, protein AF 1967580..1968179 Clostridium beijerinckii NCIMB 8052 5292913 YP_001308826.1 CDS Cbei_1698 NC_009617.1 1968191 1968811 D TIGRFAM: Sporulation stage III, protein AG; KEGG: cpe:CPE1827 stage III sporulation protein AG; sporulation stage III, protein AG 1968191..1968811 Clostridium beijerinckii NCIMB 8052 5292914 YP_001308827.1 CDS Cbei_1699 NC_009617.1 1968851 1969366 D KEGG: cpr:CPR_1794 stage III sporulation protein AH; stage III sporulation protein AH 1968851..1969366 Clostridium beijerinckii NCIMB 8052 5292915 YP_001308828.1 CDS Cbei_1700 NC_009617.1 1969468 1969848 D PFAM: protein of unknown function DUF322; KEGG: cac:CAC2085 uncharacterized protein from alkaline shock protein family, YQHY B.subtilis ortholog; hypothetical protein 1969468..1969848 Clostridium beijerinckii NCIMB 8052 5292916 YP_001308829.1 CDS Cbei_1701 NC_009617.1 1969980 1970381 D TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: cpr:CPR_1792 N utilization substance protein B; NusB antitermination factor 1969980..1970381 Clostridium beijerinckii NCIMB 8052 5292917 YP_001308830.1 CDS Cbei_1702 NC_009617.1 1970509 1971357 D catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 1970509..1971357 Clostridium beijerinckii NCIMB 8052 5292918 YP_001308831.1 CDS xseA NC_009617.1 1971347 1972546 D bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1971347..1972546 Clostridium beijerinckii NCIMB 8052 5292919 YP_001308832.1 CDS Cbei_1704 NC_009617.1 1972559 1972783 D PFAM: Exonuclease VII, small subunit; KEGG: cno:NT01CX_1981 exodeoxyribonuclease VII, small subunit; exonuclease VII, small subunit 1972559..1972783 Clostridium beijerinckii NCIMB 8052 5292920 YP_001308833.1 CDS Cbei_1705 NC_009617.1 1972770 1973639 D PFAM: Polyprenyl synthetase; KEGG: cno:NT01CX_1982 geranyltranstransferase; polyprenyl synthetase 1972770..1973639 Clostridium beijerinckii NCIMB 8052 5292921 YP_001308834.1 CDS Cbei_1706 NC_009617.1 1973657 1975513 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1973657..1975513 Clostridium beijerinckii NCIMB 8052 5292922 YP_001308835.1 CDS Cbei_1707 NC_009617.1 1975526 1976335 D TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: cno:NT01CX_1984 hemolysin A; hemolysin A 1975526..1976335 Clostridium beijerinckii NCIMB 8052 5292923 YP_001308836.1 CDS Cbei_1708 NC_009617.1 1976352 1977206 D PFAM: ATP-NAD/AcoX kinase; KEGG: cpe:CPE1817 NAD+ kinase; ATP-NAD/AcoX kinase 1976352..1977206 Clostridium beijerinckii NCIMB 8052 5292924 YP_001308837.1 CDS argR NC_009617.1 1977203 1977655 D regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor 1977203..1977655 Clostridium beijerinckii NCIMB 8052 5292925 YP_001308838.1 CDS Cbei_1710 NC_009617.1 1977675 1979363 D TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: cpr:CPR_1783 DNA repair protein RecN; DNA repair protein RecN 1977675..1979363 Clostridium beijerinckii NCIMB 8052 5292926 YP_001308839.1 CDS Cbei_1711 NC_009617.1 1979592 1980782 D TIGRFAM: Peptidase S55, sporulation stage IV, protein B; PFAM: PDZ/DHR/GLGF domain protein; peptidase S55, SpoIVB; KEGG: cpe:CPE1814 stage IV sporulation protein B; peptidase S55, sporulation stage IV, protein B 1979592..1980782 Clostridium beijerinckii NCIMB 8052 5292927 YP_001308840.1 CDS Cbei_1712 NC_009617.1 1981390 1982211 D TIGRFAM: Sporulation response regulator, Spo0A; PFAM: response regulator receiver; Sporulation initiation factor Spo0A-like; KEGG: cpf:CPF_2067 Spo0A protein; response regulator receiver protein 1981390..1982211 Clostridium beijerinckii NCIMB 8052 5292928 YP_001308841.1 CDS Cbei_1713 NC_009617.1 1983097 1983504 D TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ppd:Ppro_3068 hemerythrin-like metal-binding protein; hemerythrin-like metal-binding protein 1983097..1983504 Clostridium beijerinckii NCIMB 8052 5292929 YP_001308842.1 CDS Cbei_1714 NC_009617.1 1983913 1984140 D hypothetical protein 1983913..1984140 Clostridium beijerinckii NCIMB 8052 5292930 YP_001308843.1 CDS Cbei_1715 NC_009617.1 1984491 1985786 D TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: cpf:CPF_1756 uracil permease; uracil transporter 1984491..1985786 Clostridium beijerinckii NCIMB 8052 5292931 YP_001308844.1 CDS Cbei_1716 NC_009617.1 1985966 1986607 D KEGG: bce:BC3526 collagen adhesion protein; hypothetical protein 1985966..1986607 Clostridium beijerinckii NCIMB 8052 5292932 YP_001308845.1 CDS Cbei_1717 NC_009617.1 1986791 1987192 D KEGG: cth:Cthe_1644 hypothetical protein; hypothetical protein 1986791..1987192 Clostridium beijerinckii NCIMB 8052 5292933 YP_001308846.1 CDS Cbei_1718 NC_009617.1 1987231 1988241 D KEGG: cpr:CPR_0353 prophage ps3 protein 01; prophage ps3 protein 01 1987231..1988241 Clostridium beijerinckii NCIMB 8052 5292934 YP_001308847.1 CDS Cbei_1719 NC_009617.1 1988267 1988878 D PFAM: Phosphoglycerate mutase; KEGG: cac:CAC3021 possible phosphoglycerate mutase; phosphoglycerate mutase 1988267..1988878 Clostridium beijerinckii NCIMB 8052 5292935 YP_001308848.1 CDS Cbei_1720 NC_009617.1 1989056 1989499 D KEGG: swo:Swol_1844 hypothetical protein; hypothetical protein 1989056..1989499 Clostridium beijerinckii NCIMB 8052 5292936 YP_001308849.1 CDS Cbei_1721 NC_009617.1 1989569 1990213 D PFAM: metallophosphoesterase; KEGG: mma:MM3285 hypothetical protein; metallophosphoesterase 1989569..1990213 Clostridium beijerinckii NCIMB 8052 5292937 YP_001308850.1 CDS Cbei_1722 NC_009617.1 1990689 1991855 D PFAM: iron-containing alcohol dehydrogenase; KEGG: cpf:CPF_1465 NADPH-dependent butanol dehydrogenase; iron-containing alcohol dehydrogenase 1990689..1991855 Clostridium beijerinckii NCIMB 8052 5292938 YP_001308851.1 CDS Cbei_1723 NC_009617.1 1992278 1993996 D PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cno:NT01CX_0316 membrane assosiated methyl-accepting chemotaxis protein with HAMP domain; methyl-accepting chemotaxis sensory transducer 1992278..1993996 Clostridium beijerinckii NCIMB 8052 5292939 YP_001308852.1 CDS Cbei_1724 NC_009617.1 1994297 1995283 D PFAM: glycosyl transferase, family 2; KEGG: cac:CAC3661 glycosyltransferase; glycosyl transferase family protein 1994297..1995283 Clostridium beijerinckii NCIMB 8052 5292940 YP_001308853.1 CDS Cbei_1725 NC_009617.1 1995297 1997516 D PFAM: glycosyl transferase, family 39; KEGG: cac:CAC2251 uncharacterized conserved membrane protein, affecting LPS biosynthesis; glycosyl transferase family protein 1995297..1997516 Clostridium beijerinckii NCIMB 8052 5292941 YP_001308854.1 CDS Cbei_1726 NC_009617.1 1997892 1999643 D KEGG: cac:CAC0354 uncharacterized membrane protein; hypothetical protein 1997892..1999643 Clostridium beijerinckii NCIMB 8052 5292942 YP_001308855.1 CDS Cbei_1727 NC_009617.1 1999640 2000530 D TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: cno:NT01CX_1540 UTP-glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase 1999640..2000530 Clostridium beijerinckii NCIMB 8052 5292943 YP_001308856.1 CDS Cbei_1728 NC_009617.1 2000712 2001164 D KEGG: ava:Ava_5022 hypothetical protein; hypothetical protein 2000712..2001164 Clostridium beijerinckii NCIMB 8052 5292944 YP_001308857.1 CDS Cbei_1729 NC_009617.1 2001325 2002548 D TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; Glycosyltransferase 28, C-terminal domain; KEGG: btk:BT9727_1898 glycosyltransferase; possible macrolide glycosyltransferase; glycosyl transferase family protein 2001325..2002548 Clostridium beijerinckii NCIMB 8052 5292945 YP_001308858.1 CDS Cbei_1730 NC_009617.1 2002804 2003310 D PFAM: NUDIX hydrolase; KEGG: lmf:LMOf2365_0384 MutT/nudix family protein; NUDIX hydrolase 2002804..2003310 Clostridium beijerinckii NCIMB 8052 5292946 YP_001308859.1 CDS Cbei_1731 NC_009617.1 2003459 2004136 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cno:NT01CX_1513 two-component response regulator; two component transcriptional regulator 2003459..2004136 Clostridium beijerinckii NCIMB 8052 5292947 YP_001308860.1 CDS Cbei_1732 NC_009617.1 2004139 2005653 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cno:NT01CX_1514 membrane associated histidine kinase with HAMP domain; integral membrane sensor signal transduction histidine kinase 2004139..2005653 Clostridium beijerinckii NCIMB 8052 5292948 YP_001308861.1 CDS Cbei_1733 NC_009617.1 2005824 2006126 R KEGG: cpr:CPR_0939 hypothetical protein; hypothetical protein complement(2005824..2006126) Clostridium beijerinckii NCIMB 8052 5292949 YP_001308862.1 CDS Cbei_1734 NC_009617.1 2006603 2007835 D hypothetical protein 2006603..2007835 Clostridium beijerinckii NCIMB 8052 5292950 YP_001308863.1 CDS Cbei_1735 NC_009617.1 2007939 2009366 R KEGG: rno:690249 hypothetical protein LOC690249; hypothetical protein complement(2007939..2009366) Clostridium beijerinckii NCIMB 8052 5292951 YP_001308864.1 CDS Cbei_1736 NC_009617.1 2009359 2009847 R TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: dsy:DSY1734 hypothetical protein; ECF subfamily RNA polymerase sigma-24 factor complement(2009359..2009847) Clostridium beijerinckii NCIMB 8052 5292952 YP_001308865.1 CDS Cbei_1737 NC_009617.1 2010211 2010807 D PFAM: NAD(P)H dehydrogenase (quinone); KEGG: cpf:CPF_0793 flavodoxin family protein; NAD(P)H dehydrogenase (quinone) 2010211..2010807 Clostridium beijerinckii NCIMB 8052 5292953 YP_001308866.1 CDS Cbei_1738 NC_009617.1 2011115 2011270 D KEGG: cpr:CPR_0375 hypothetical protein; hypothetical protein 2011115..2011270 Clostridium beijerinckii NCIMB 8052 5292954 YP_001308867.1 CDS Cbei_1739 NC_009617.1 2011404 2012186 D PFAM: protein of unknown function DUF328; KEGG: cpf:CPF_2407 hypothetical protein; hypothetical protein 2011404..2012186 Clostridium beijerinckii NCIMB 8052 5292955 YP_001308868.1 CDS Cbei_1740 NC_009617.1 2012256 2013182 D member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z 2012256..2013182 Clostridium beijerinckii NCIMB 8052 5292956 YP_001308869.1 CDS Cbei_1741 NC_009617.1 2013449 2014150 D TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: cac:CAC0965 1-acyl-sn-glycerol-3-phosphate acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 2013449..2014150 Clostridium beijerinckii NCIMB 8052 5292957 YP_001308870.1 CDS Cbei_1742 NC_009617.1 2014432 2016468 D TIGRFAM: small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor G, domain IV; KEGG: cac:CAC0854 tetracycline resistance protein TetP, contain GTP-ase domain; small GTP-binding protein 2014432..2016468 Clostridium beijerinckii NCIMB 8052 5292958 YP_001308871.1 CDS Cbei_1743 NC_009617.1 2016550 2017329 D PFAM: protein of unknown function DUF45; KEGG: cpf:CPF_0800 hypothetical protein; hypothetical protein 2016550..2017329 Clostridium beijerinckii NCIMB 8052 5292959 YP_001308872.1 CDS Cbei_1744 NC_009617.1 2017423 2017884 R PFAM: protein of unknown function DUF606; KEGG: bce:BC3451 hypothetical membrane spanning protein; hypothetical protein complement(2017423..2017884) Clostridium beijerinckii NCIMB 8052 5292960 YP_001308873.1 CDS Cbei_1745 NC_009617.1 2017906 2018328 R PFAM: protein of unknown function DUF606; KEGG: bca:BCE_3463 hypothetical protein; hypothetical protein complement(2017906..2018328) Clostridium beijerinckii NCIMB 8052 5292961 YP_001308874.1 CDS Cbei_1746 NC_009617.1 2018501 2019193 D PFAM: cyclic nucleotide-binding; KEGG: btk:BT9727_3228 possible transcriptional regulator; cyclic nucleotide-binding domain protein; cyclic nucleotide-binding protein 2018501..2019193 Clostridium beijerinckii NCIMB 8052 5292962 YP_001308875.1 CDS Cbei_1747 NC_009617.1 2019409 2020518 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cno:NT01CX_2355 ATP-dependent RNA helicase; DEAD/DEAH box helicase complement(2019409..2020518) Clostridium beijerinckii NCIMB 8052 5292963 YP_001308876.1 CDS Cbei_1748 NC_009617.1 2020842 2021270 D TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: cac:CAC2236 uncharacterized conserved protein of YjeB/RRF2 family; BadM/Rrf2 family transcriptional regulator 2020842..2021270 Clostridium beijerinckii NCIMB 8052 5292964 YP_001308877.1 CDS Cbei_1749 NC_009617.1 2022262 2023653 D TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: tte:TTE1583 anthranilate/para-aminobenzoate synthases component I; anthranilate synthase component I 2022262..2023653 Clostridium beijerinckii NCIMB 8052 5292965 YP_001308878.1 CDS Cbei_1750 NC_009617.1 2023650 2024237 D TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: cac:CAC3162 anthranilate synthase component II; glutamine amidotransferase of anthranilate synthase 2023650..2024237 Clostridium beijerinckii NCIMB 8052 5292966 YP_001308879.1 CDS trpD NC_009617.1 2024317 2025336 D Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2024317..2025336 Clostridium beijerinckii NCIMB 8052 5292967 YP_001308880.1 CDS Cbei_1752 NC_009617.1 2025361 2026164 D PFAM: Indole-3-glycerol phosphate synthase; KEGG: cac:CAC3160 indole-3-glycerol phosphate synthase; Indole-3-glycerol phosphate synthase 2025361..2026164 Clostridium beijerinckii NCIMB 8052 5292968 YP_001308881.1 CDS Cbei_1753 NC_009617.1 2026207 2026896 D PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: cth:Cthe_0871 phosphoribosylanthranilate isomerase; phosphoribosylanthranilate isomerase 2026207..2026896 Clostridium beijerinckii NCIMB 8052 5292969 YP_001308882.1 CDS Cbei_1754 NC_009617.1 2026918 2028093 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 2026918..2028093 Clostridium beijerinckii NCIMB 8052 5292970 YP_001308883.1 CDS Cbei_1755 NC_009617.1 2028093 2028869 D TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase, alpha chain; KEGG: cac:CAC3157 tryptophan synthase alpha chain; tryptophan synthase subunit alpha 2028093..2028869 Clostridium beijerinckii NCIMB 8052 5292971 YP_001308884.1 CDS Cbei_1756 NC_009617.1 2028994 2029407 R PFAM: protein of unknown function DUF1284; KEGG: cno:NT01CX_0018 hypothetical protein; hypothetical protein complement(2028994..2029407) Clostridium beijerinckii NCIMB 8052 5292972 YP_001308885.1 CDS Cbei_1757 NC_009617.1 2029699 2029998 D KEGG: cpr:CPR_1498 hypothetical protein; hypothetical protein 2029699..2029998 Clostridium beijerinckii NCIMB 8052 5292973 YP_001308886.1 CDS Cbei_1758 NC_009617.1 2030114 2030533 D KEGG: ctc:CTC01852 hypothetical protein; hypothetical protein 2030114..2030533 Clostridium beijerinckii NCIMB 8052 5292974 YP_001308887.1 CDS Cbei_1759 NC_009617.1 2036870 2037568 D TIGRFAM: phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase; KEGG: bat:BAS2313 phosphoglycerate mutase; phosphoglycerate mutase 2036870..2037568 Clostridium beijerinckii NCIMB 8052 5296353 YP_001308888.1 CDS Cbei_1760 NC_009617.1 2037882 2039282 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: lsa:LSA0328 drug:Na(+) antiporter (drug efflux pump); MATE efflux family protein 2037882..2039282 Clostridium beijerinckii NCIMB 8052 5292976 YP_001308889.1 CDS Cbei_1761 NC_009617.1 2039880 2040620 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mst:Msp_1323 hypothetical protein; hypothetical protein 2039880..2040620 Clostridium beijerinckii NCIMB 8052 5292977 YP_001308890.1 CDS Cbei_1762 NC_009617.1 2041208 2042374 D PFAM: Extracellular ligand-binding receptor; KEGG: lip:LI0496 branched chain amino acid ABC transporter periplasmic amino acid-binding protein; extracellular ligand-binding receptor 2041208..2042374 Clostridium beijerinckii NCIMB 8052 5292978 YP_001308891.1 CDS Cbei_1763 NC_009617.1 2042389 2043291 D PFAM: inner-membrane translocator; KEGG: sfu:Sfum_0861 inner-membrane translocator; inner-membrane translocator 2042389..2043291 Clostridium beijerinckii NCIMB 8052 5292979 YP_001308892.1 CDS Cbei_1764 NC_009617.1 2043294 2044352 D PFAM: inner-membrane translocator; KEGG: bqu:BQ06310 high-affinity branched-chain amino acid transporter permease; inner-membrane translocator 2043294..2044352 Clostridium beijerinckii NCIMB 8052 5292980 YP_001308893.1 CDS Cbei_1765 NC_009617.1 2044352 2045122 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: tma:TM1138 branched-chain amino acid transport system ATP-binding protein; ABC transporter 2044352..2045122 Clostridium beijerinckii NCIMB 8052 5292981 YP_001308894.1 CDS Cbei_1766 NC_009617.1 2045115 2045828 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: tma:TM1139 branched-chain amino acid transport system ATP-binding protein; ABC transporter 2045115..2045828 Clostridium beijerinckii NCIMB 8052 5292982 YP_001308895.1 CDS Cbei_1767 NC_009617.1 2046110 2047273 D PFAM: Extracellular ligand-binding receptor; KEGG: lip:LI0496 branched chain amino acid ABC transporter periplasmic amino acid-binding protein; extracellular ligand-binding receptor 2046110..2047273 Clostridium beijerinckii NCIMB 8052 5292983 YP_001308896.1 CDS Cbei_1768 NC_009617.1 2047436 2047828 D KEGG: cpe:CPE0415 hypothetical protein; hypothetical protein 2047436..2047828 Clostridium beijerinckii NCIMB 8052 5292984 YP_001308897.1 CDS Cbei_1769 NC_009617.1 2048180 2049718 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dge:Dgeo_1614 diguanylate cyclase with PAS/PAC sensor; diguanylate cyclase 2048180..2049718 Clostridium beijerinckii NCIMB 8052 5292985 YP_001308898.1 CDS Cbei_1770 NC_009617.1 2049919 2051148 R PFAM: protein of unknown function DUF894, DitE; major facilitator superfamily MFS_1; KEGG: cac:CA_P0049 permease, MDR related; major facilitator superfamily transporter complement(2049919..2051148) Clostridium beijerinckii NCIMB 8052 5292986 YP_001308899.1 CDS Cbei_1771 NC_009617.1 2051636 2052295 D PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: cpr:CPR_0434 sulfite/nitrite reductase; nitrite and sulfite reductase 4Fe-4S subunit 2051636..2052295 Clostridium beijerinckii NCIMB 8052 5292987 YP_001308900.1 CDS Cbei_1772 NC_009617.1 2052396 2053061 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cth:Cthe_0780 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase 2052396..2053061 Clostridium beijerinckii NCIMB 8052 5292988 YP_001308901.1 CDS Cbei_1773 NC_009617.1 2053565 2055499 D TIGRFAM: hydrogenase, Fe-only; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; iron hydrogenase, small subunit; hydrogenase large subunit domain protein; KEGG: pca:Pcar_1605 NADH:ubiquinone oxidoreductase subunit; hydrogenase, Fe-only 2053565..2055499 Clostridium beijerinckii NCIMB 8052 5292989 YP_001308902.1 CDS Cbei_1774 NC_009617.1 2056236 2056859 D PFAM: protein of unknown function DUF47; KEGG: cpf:CPF_0562 hypothetical protein; hypothetical protein 2056236..2056859 Clostridium beijerinckii NCIMB 8052 5292990 YP_001308903.1 CDS Cbei_1775 NC_009617.1 2056852 2057850 D PFAM: phosphate transporter; KEGG: cpr:CPR_0549 phosphate permease; phosphate transporter 2056852..2057850 Clostridium beijerinckii NCIMB 8052 5292991 YP_001308904.1 CDS Cbei_1776 NC_009617.1 2058025 2059221 D hypothetical protein 2058025..2059221 Clostridium beijerinckii NCIMB 8052 5292992 YP_001308905.1 CDS Cbei_1777 NC_009617.1 2059261 2060109 D PFAM: metallophosphoesterase; KEGG: cth:Cthe_1896 metallophosphoesterase; metallophosphoesterase 2059261..2060109 Clostridium beijerinckii NCIMB 8052 5292993 YP_001308906.1 CDS Cbei_1779 NC_009617.1 2060430 2060807 D KEGG: cno:NT01CX_2050 hypothetical protein; hypothetical protein 2060430..2060807 Clostridium beijerinckii NCIMB 8052 5296354 YP_001308907.1 CDS Cbei_1780 NC_009617.1 2060944 2061324 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cac:CAC0249 glyoxalase I (glyoxalase family); glyoxalase/bleomycin resistance protein/dioxygenase 2060944..2061324 Clostridium beijerinckii NCIMB 8052 5292995 YP_001308908.1 CDS Cbei_1781 NC_009617.1 2061365 2062555 D PFAM: aminotransferase, class I and II; KEGG: tde:TDE1669 hemolysin; class I and II aminotransferase 2061365..2062555 Clostridium beijerinckii NCIMB 8052 5292996 YP_001308909.1 CDS valS NC_009617.1 2063559 2066204 D valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 2063559..2066204 Clostridium beijerinckii NCIMB 8052 5292997 YP_001308910.1 CDS Cbei_1783 NC_009617.1 2066478 2067329 D PFAM: Integral membrane protein TerC; KEGG: chu:CHU_1367 probable integral membrane protein, TerC family; integral membrane protein TerC 2066478..2067329 Clostridium beijerinckii NCIMB 8052 5292998 YP_001308911.1 CDS Cbei_1784 NC_009617.1 2067546 2068859 D TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; KEGG: cno:NT01CX_1729 folylpolyglutamate synthase; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 2067546..2068859 Clostridium beijerinckii NCIMB 8052 5292999 YP_001308912.1 CDS Cbei_1785 NC_009617.1 2068962 2070941 D PFAM: HIRAN; KEGG: ctc:CTC01149 hypothetical protein; hypothetical protein 2068962..2070941 Clostridium beijerinckii NCIMB 8052 5293000 YP_001308913.1 CDS Cbei_1786 NC_009617.1 2071065 2071322 R KEGG: cpf:CPF_1268 hypothetical protein; hypothetical protein complement(2071065..2071322) Clostridium beijerinckii NCIMB 8052 5293001 YP_001308914.1 CDS Cbei_1787 NC_009617.1 2071465 2072427 D TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: ctc:CTC02300 hypothetical protein; hypothetical protein 2071465..2072427 Clostridium beijerinckii NCIMB 8052 5293002 YP_001308915.1 CDS Cbei_1788 NC_009617.1 2072671 2073195 R KEGG: cpr:CPR_1879 hypothetical protein; hypothetical protein complement(2072671..2073195) Clostridium beijerinckii NCIMB 8052 5293003 YP_001308916.1 CDS Cbei_1789 NC_009617.1 2073363 2074124 D PFAM: polysaccharide deacetylase; KEGG: cpr:CPR_1878 polysaccharide deacetylase family protein; polysaccharide deacetylase 2073363..2074124 Clostridium beijerinckii NCIMB 8052 5293004 YP_001308917.1 CDS Cbei_1790 NC_009617.1 2074230 2074880 D binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 2074230..2074880 Clostridium beijerinckii NCIMB 8052 5293005 YP_001308918.1 CDS Cbei_1791 NC_009617.1 2075107 2075817 R PFAM: transferase hexapeptide repeat containing protein; Tetrahydrodipicolinate succinyltransferase N-terminal domain protein; KEGG: cpf:CPF_2165 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; tetrahydrodipicolinate succinyltransferase domain-containing protein complement(2075107..2075817) Clostridium beijerinckii NCIMB 8052 5293006 YP_001308919.1 CDS Cbei_1792 NC_009617.1 2075973 2077118 D PFAM: aminotransferase, class I and II; KEGG: cpr:CPR_1874 aspartate aminotransferase; class I and II aminotransferase 2075973..2077118 Clostridium beijerinckii NCIMB 8052 5293007 YP_001308920.1 CDS Cbei_1793 NC_009617.1 2077203 2077520 D PFAM: protein of unknown function DUF1255; KEGG: pca:Pcar_1338 hypothetical protein; hypothetical protein 2077203..2077520 Clostridium beijerinckii NCIMB 8052 5293008 YP_001308921.1 CDS Cbei_1794 NC_009617.1 2077828 2078136 D PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; KEGG: ssa:SSA_1771 conserved DNA methyltransferase protein; DNA binding methylated-DNA-(protein)-cysteine S-methyltransferase 2077828..2078136 Clostridium beijerinckii NCIMB 8052 5293009 YP_001308922.1 CDS Cbei_1795 NC_009617.1 2078371 2079126 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(2078371..2079126) Clostridium beijerinckii NCIMB 8052 5293010 YP_001308923.1 CDS Cbei_1796 NC_009617.1 2079136 2080014 R TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: cno:NT01CX_1746 dihydrodipicolinate synthase; dihydrodipicolinate synthase complement(2079136..2080014) Clostridium beijerinckii NCIMB 8052 5293011 YP_001308924.1 CDS Cbei_1797 NC_009617.1 2080044 2081036 R TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, NAD - binding; Semialdehyde dehydrogenase, dimerisation region; KEGG: cpf:CPF_2160 aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase complement(2080044..2081036) Clostridium beijerinckii NCIMB 8052 5293012 YP_001308925.1 CDS Cbei_1798 NC_009617.1 2081479 2081697 D KEGG: cno:NT01CX_1748 small acid-soluble spore protein; small acid-soluble spore protein 2081479..2081697 Clostridium beijerinckii NCIMB 8052 5293013 YP_001308926.1 CDS Cbei_1799 NC_009617.1 2081799 2082536 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cpf:CPF_2158 hypothetical protein; type 11 methyltransferase 2081799..2082536 Clostridium beijerinckii NCIMB 8052 5293014 YP_001308927.1 CDS hslO NC_009617.1 2082563 2083444 D becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 2082563..2083444 Clostridium beijerinckii NCIMB 8052 5293015 YP_001308928.1 CDS Cbei_1801 NC_009617.1 2083585 2084340 D PFAM: protein of unknown function DUF218; KEGG: cpe:CPE1241 hypothetical protein; hypothetical protein 2083585..2084340 Clostridium beijerinckii NCIMB 8052 5293016 YP_001308929.1 CDS Cbei_1802 NC_009617.1 2084389 2085234 D PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cpr:CPR_0987 ribosomal large subunit pseudouridine synthase F; pseudouridine synthase 2084389..2085234 Clostridium beijerinckii NCIMB 8052 5293017 YP_001308930.1 CDS Cbei_1803 NC_009617.1 2085452 2085781 D hypothetical protein 2085452..2085781 Clostridium beijerinckii NCIMB 8052 5293018 YP_001308931.1 CDS Cbei_1804 NC_009617.1 2085778 2087223 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: ctc:CTC01491 sensory transduction protein kinase; integral membrane sensor signal transduction histidine kinase 2085778..2087223 Clostridium beijerinckii NCIMB 8052 5293019 YP_001308932.1 CDS Cbei_1805 NC_009617.1 2087265 2087963 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: chy:CHY_0092 DNA-binding response regulator; two component transcriptional regulator 2087265..2087963 Clostridium beijerinckii NCIMB 8052 5293020 YP_001308933.1 CDS Cbei_1806 NC_009617.1 2088284 2089528 D KEGG: pfa:PF14_0337 hypothetical protein; hypothetical protein 2088284..2089528 Clostridium beijerinckii NCIMB 8052 5293021 YP_001308934.1 CDS Cbei_1807 NC_009617.1 2089531 2091006 D PFAM: secretion protein HlyD family protein; KEGG: dsy:DSY3620 hypothetical protein; secretion protein HlyD family protein 2089531..2091006 Clostridium beijerinckii NCIMB 8052 5293022 YP_001308935.1 CDS Cbei_1808 NC_009617.1 2091014 2091757 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY3619 hypothetical protein; ABC transporter 2091014..2091757 Clostridium beijerinckii NCIMB 8052 5293023 YP_001308936.1 CDS Cbei_1809 NC_009617.1 2091802 2093241 D PFAM: protein of unknown function DUF214; KEGG: dsy:DSY3618 hypothetical protein; hypothetical protein 2091802..2093241 Clostridium beijerinckii NCIMB 8052 5293024 YP_001308937.1 CDS Cbei_1810 NC_009617.1 2093335 2093958 R KEGG: cno:NT01CX_1194 hypothetical protein; hypothetical protein complement(2093335..2093958) Clostridium beijerinckii NCIMB 8052 5293025 YP_001308938.1 CDS Cbei_1811 NC_009617.1 2094344 2094970 R PFAM: SNARE associated Golgi protein; KEGG: cpe:CPE1612 hypothetical protein; hypothetical protein complement(2094344..2094970) Clostridium beijerinckii NCIMB 8052 5293026 YP_001308939.1 CDS Cbei_1812 NC_009617.1 2095200 2096276 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 2095200..2096276 Clostridium beijerinckii NCIMB 8052 5293027 YP_001308940.1 CDS Cbei_1813 NC_009617.1 2096494 2097531 D PFAM: peptidase M42 family protein; KEGG: cpf:CPF_1252 aminopeptidase, M42 family; peptidase M42 family protein 2096494..2097531 Clostridium beijerinckii NCIMB 8052 5293028 YP_001308941.1 CDS Cbei_1814 NC_009617.1 2097919 2098575 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cac:CAC0632 predicted phosphatase; HAD family hydrolase 2097919..2098575 Clostridium beijerinckii NCIMB 8052 5293029 YP_001308942.1 CDS Cbei_1815 NC_009617.1 2098707 2100182 D PFAM: leucine-rich repeat protein; cell wall binding repeat-containing protein; SMART: leucine-rich repeat-containing protein, typical subtype; KEGG: cpf:CPF_0611 cell wall binding repeat protein; cell wall binding repeat-containing protein 2098707..2100182 Clostridium beijerinckii NCIMB 8052 5293030 YP_001308943.1 CDS Cbei_1816 NC_009617.1 2100486 2101448 D PFAM: cobalamin synthesis protein, P47K; KEGG: ctc:CTC00941 cobalamin synthesis protein CobW; cobalamin synthesis protein, P47K 2100486..2101448 Clostridium beijerinckii NCIMB 8052 5293031 YP_001308944.1 CDS Cbei_1817 NC_009617.1 2101491 2102159 D KEGG: ctc:CTC00940 hypothetical protein; hypothetical protein 2101491..2102159 Clostridium beijerinckii NCIMB 8052 5293032 YP_001308945.1 CDS Cbei_1818 NC_009617.1 2102156 2103154 D PFAM: permease; KEGG: cno:NT01CX_2389 predicted permease superfamily; permease 2102156..2103154 Clostridium beijerinckii NCIMB 8052 5293033 YP_001308946.1 CDS Cbei_1819 NC_009617.1 2103321 2103950 D KEGG: ctc:CTC00938 membrane-spanning protein; membrane-spanning protein 2103321..2103950 Clostridium beijerinckii NCIMB 8052 5293034 YP_001308947.1 CDS Cbei_1820 NC_009617.1 2104087 2104665 R hypothetical protein complement(2104087..2104665) Clostridium beijerinckii NCIMB 8052 5293035 YP_001308948.1 CDS Cbei_1821 NC_009617.1 2105130 2106338 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: ctc:CTC01856 ATP-dependent RNA helicase; DEAD/DEAH box helicase complement(2105130..2106338) Clostridium beijerinckii NCIMB 8052 5293036 YP_001308949.1 CDS Cbei_1822 NC_009617.1 2106655 2108097 D PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: baa:BA_0561 DEAD/DEAH box helicase; DEAD/DEAH box helicase 2106655..2108097 Clostridium beijerinckii NCIMB 8052 5293037 YP_001308950.1 CDS Cbei_1823 NC_009617.1 2108410 2109279 D TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; SEC-C motif domain protein; KEGG: cpf:CPF_1635 methionine aminopeptidase, type I; methionine aminopeptidase 2108410..2109279 Clostridium beijerinckii NCIMB 8052 5293038 YP_001308951.1 CDS Cbei_1824 NC_009617.1 2109363 2111813 D TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cno:NT01CX_2302 ATP-dependent DNA helicase; ATP-dependent DNA helicase RecQ 2109363..2111813 Clostridium beijerinckii NCIMB 8052 5293039 YP_001308952.1 CDS Cbei_1825 NC_009617.1 2111935 2112438 D PFAM: heat shock protein DnaJ domain protein; Tetratricopeptide TPR_2 repeat protein; KEGG: cno:NT01CX_1376 molecular chaperone, DnaJ family (contain C-term. Zn finger domain); heat shock protein DnaJ domain-containing protein 2111935..2112438 Clostridium beijerinckii NCIMB 8052 5293040 YP_001308953.1 CDS Cbei_1826 NC_009617.1 2113025 2113690 D Heat shock-induced; RNA polymerase sigma factor SigI 2113025..2113690 Clostridium beijerinckii NCIMB 8052 5293041 YP_001308954.1 CDS Cbei_1827 NC_009617.1 2113700 2114836 D KEGG: bsu:BG13272 hypothetical protein; hypothetical protein 2113700..2114836 Clostridium beijerinckii NCIMB 8052 5293042 YP_001308955.1 CDS Cbei_1828 NC_009617.1 2115027 2116808 D catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase 2115027..2116808 Clostridium beijerinckii NCIMB 8052 5293043 YP_001308956.1 CDS Cbei_1829 NC_009617.1 2116854 2117399 D PFAM: Phosphoglycerate mutase; KEGG: bha:BH0736 hypothetical protein; phosphoglycerate mutase 2116854..2117399 Clostridium beijerinckii NCIMB 8052 5293044 YP_001308957.1 CDS Cbei_1830 NC_009617.1 2117590 2118831 D function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase 2117590..2118831 Clostridium beijerinckii NCIMB 8052 5293045 YP_001308958.1 CDS Cbei_1831 NC_009617.1 2118954 2120006 D PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: cac:CAC0693 transcriptional regulator of the LacI family; alanine racemase 2118954..2120006 Clostridium beijerinckii NCIMB 8052 5293046 YP_001308959.1 CDS Cbei_1832 NC_009617.1 2120202 2121602 D catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 2120202..2121602 Clostridium beijerinckii NCIMB 8052 5293047 YP_001308960.1 CDS Cbei_1833 NC_009617.1 2121691 2123139 D catalyzes the formation of D-tagaturonate from D-altronate; altronate oxidoreductase 2121691..2123139 Clostridium beijerinckii NCIMB 8052 5293048 YP_001308961.1 CDS Cbei_1834 NC_009617.1 2123225 2123647 D PFAM: histidine triad (HIT) protein; KEGG: bth:BT_4586 hypothetical protein; histidine triad (HIT) protein 2123225..2123647 Clostridium beijerinckii NCIMB 8052 5293049 YP_001308962.1 CDS Cbei_1835 NC_009617.1 2123700 2125106 D TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: lbr:LVIS_0148 Na+/xyloside symporter related transporter; sugar (glycoside-Pentoside-hexuronide) transporter 2123700..2125106 Clostridium beijerinckii NCIMB 8052 5293050 YP_001308963.1 CDS Cbei_1836 NC_009617.1 2125775 2126422 D catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 2125775..2126422 Clostridium beijerinckii NCIMB 8052 5293051 YP_001308964.1 CDS Cbei_1837 NC_009617.1 2126424 2127374 D PFAM: PfkB domain protein; KEGG: gka:GK1957 2-keto-3-deoxy-gluconate kinase; ribokinase-like domain-containing protein 2126424..2127374 Clostridium beijerinckii NCIMB 8052 5293052 YP_001308965.1 CDS Cbei_1838 NC_009617.1 2127707 2129155 D catalyzes the formation of D-tagaturonate from D-altronate; altronate oxidoreductase 2127707..2129155 Clostridium beijerinckii NCIMB 8052 5293053 YP_001308966.1 CDS Cbei_1839 NC_009617.1 2129248 2130735 D PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain; KEGG: cac:CAC0696 altronate dehydratase; altronate dehydratase 2129248..2130735 Clostridium beijerinckii NCIMB 8052 5293054 YP_001308967.1 CDS Cbei_1840 NC_009617.1 2131237 2131728 D TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; PFAM: PTS system sorbose subfamily IIB component; KEGG: yps:YPTB1634 PTS system, mannose-specific IIAB component; PTS system mannose/fructose/sorbose family transporter subunit IIB 2131237..2131728 Clostridium beijerinckii NCIMB 8052 5293055 YP_001308968.1 CDS Cbei_1841 NC_009617.1 2131981 2132838 D PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: ctc:CTC00497 pyridoxal kinase; phosphomethylpyrimidine kinase type-1 2131981..2132838 Clostridium beijerinckii NCIMB 8052 5293056 YP_001308969.1 CDS Cbei_1842 NC_009617.1 2132967 2133719 D PFAM: regulatory protein, DeoR; KEGG: cpf:CPF_0566 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 2132967..2133719 Clostridium beijerinckii NCIMB 8052 5293057 YP_001308970.1 CDS Cbei_1843 NC_009617.1 2133712 2134614 D PFAM: PfkB domain protein; KEGG: cno:NT01CX_1725 1-phosphofructokinase; 1-phosphofructokinase 2133712..2134614 Clostridium beijerinckii NCIMB 8052 5293058 YP_001308971.1 CDS Cbei_1844 NC_009617.1 2134739 2136661 D TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system, EIIC; phosphotransferase system PTS, fructose-specific IIB subunit; KEGG: btk:BT9727_3462 PTS fructose-specific enzyme IIBC component; PTS system fructose subfamily transporter subunit IIC 2134739..2136661 Clostridium beijerinckii NCIMB 8052 5293059 YP_001308972.1 CDS Cbei_1845 NC_009617.1 2137002 2137640 D KEGG: cpf:CPF_1730 hypothetical protein; hypothetical protein 2137002..2137640 Clostridium beijerinckii NCIMB 8052 5293060 YP_001308973.1 CDS Cbei_1846 NC_009617.1 2137774 2138325 D PFAM: Hemerythrin HHE cation binding domain protein; KEGG: cac:CAC0760 uncharacterized conserved protein, YTFE family, possibly metal-binding; hemerythrin HHE cation binding domain-containing protein 2137774..2138325 Clostridium beijerinckii NCIMB 8052 5293061 YP_001308974.1 CDS Cbei_1847 NC_009617.1 2138565 2138957 R TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: maq:Maqu_3071 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator complement(2138565..2138957) Clostridium beijerinckii NCIMB 8052 5293062 YP_001308975.1 CDS Cbei_1848 NC_009617.1 2139203 2139955 D TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC3288 iron-regulated ABC transporter ATPase subunit (SufC), VEG296 B.subtilis ortholog; FeS assembly ATPase SufC 2139203..2139955 Clostridium beijerinckii NCIMB 8052 5293063 YP_001308976.1 CDS Cbei_1849 NC_009617.1 2139971 2141380 D TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: cac:CAC3289 iron-regulated ABC-type transporter membrane component (SufB); FeS assembly protein SufB 2139971..2141380 Clostridium beijerinckii NCIMB 8052 5293064 YP_001308977.1 CDS Cbei_1850 NC_009617.1 2141390 2142487 D TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: cac:CAC3290 iron-regulated ABC-type transporter membrane component (SufB); FeS assembly protein SufD 2141390..2142487 Clostridium beijerinckii NCIMB 8052 5293065 YP_001308978.1 CDS Cbei_1851 NC_009617.1 2142480 2143709 D TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cac:CAC3291 selenocysteine lyase, NifS family; SufS subfamily cysteine desulfurase 2142480..2143709 Clostridium beijerinckii NCIMB 8052 5293066 YP_001308979.1 CDS Cbei_1852 NC_009617.1 2143715 2144140 D TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: cac:CAC3292 NifU homolog involved in Fe-S cluster formation; NifU family SUF system FeS assembly protein 2143715..2144140 Clostridium beijerinckii NCIMB 8052 5293067 YP_001308980.1 CDS Cbei_1853 NC_009617.1 2144537 2148052 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cpf:CPF_2318 pyruvate-flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 2144537..2148052 Clostridium beijerinckii NCIMB 8052 5293068 YP_001308981.1 CDS Cbei_1854 NC_009617.1 2148319 2150055 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: cpr:CPR_2070 subtilase family protein; peptidase S8/S53 subtilisin kexin sedolisin 2148319..2150055 Clostridium beijerinckii NCIMB 8052 5293069 YP_001308982.1 CDS Cbei_1855 NC_009617.1 2150275 2152281 D PFAM: protein of unknown function DUF342; KEGG: cac:CAC2225 hypothetical protein; hypothetical protein 2150275..2152281 Clostridium beijerinckii NCIMB 8052 5293070 YP_001308983.1 CDS Cbei_1856 NC_009617.1 2152415 2153035 D PFAM: manganese and iron superoxide dismutase; KEGG: cpr:CPR_1251 Mn/Fe superoxide dismutase; superoxide dismutase 2152415..2153035 Clostridium beijerinckii NCIMB 8052 5293071 YP_001308984.1 CDS Cbei_1857 NC_009617.1 2153204 2153848 D PFAM: pentapeptide repeat protein; KEGG: cpe:CPE0960 hypothetical protein; pentapeptide repeat-containing protein 2153204..2153848 Clostridium beijerinckii NCIMB 8052 5293072 YP_001308985.1 CDS Cbei_1858 NC_009617.1 2154020 2154871 D TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: cac:CAC1624 uncharacterized protein from DegV (B.subtilis) family; degV family protein 2154020..2154871 Clostridium beijerinckii NCIMB 8052 5293073 YP_001308986.1 CDS Cbei_1859 NC_009617.1 2155016 2155882 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: cac:CAC1576 predicted oxidoreductase, ortholog of GSP39 B.subtilis; short-chain dehydrogenase/reductase SDR 2155016..2155882 Clostridium beijerinckii NCIMB 8052 5293074 YP_001308987.1 CDS Cbei_1860 NC_009617.1 2156359 2156682 D PFAM: ArsR family transcriptional regulator; KEGG: cpr:CPR_0825 transcription regulator; ArsR family transcriptional regulator 2156359..2156682 Clostridium beijerinckii NCIMB 8052 5293075 YP_001308988.1 CDS Cbei_1861 NC_009617.1 2156734 2158092 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cpr:CPR_0828 MATE efflux family protein; MATE efflux family protein 2156734..2158092 Clostridium beijerinckii NCIMB 8052 5293076 YP_001308989.1 CDS Cbei_1862 NC_009617.1 2158138 2160486 D Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; bifunctional glutamate--cysteine ligase/glutathione synthetase 2158138..2160486 Clostridium beijerinckii NCIMB 8052 5293077 YP_001308990.1 CDS Cbei_1863 NC_009617.1 2160551 2161114 R hypothetical protein complement(2160551..2161114) Clostridium beijerinckii NCIMB 8052 5293078 YP_001308991.1 CDS Cbei_1864 NC_009617.1 2161340 2161999 D KEGG: cac:CAC1097 hypothetical protein; hypothetical protein 2161340..2161999 Clostridium beijerinckii NCIMB 8052 5293079 YP_001308992.1 CDS Cbei_1865 NC_009617.1 2162089 2162646 D hypothetical protein 2162089..2162646 Clostridium beijerinckii NCIMB 8052 5293080 YP_001308993.1 CDS Cbei_1866 NC_009617.1 2162657 2163106 R KEGG: cpr:CPR_1897 hypothetical protein; hypothetical protein complement(2162657..2163106) Clostridium beijerinckii NCIMB 8052 5293081 YP_001308994.1 CDS Cbei_1867 NC_009617.1 2163172 2163930 R PFAM: protein of unknown function DUF1212; KEGG: cac:CAC2265 hypothetical protein; hypothetical protein complement(2163172..2163930) Clostridium beijerinckii NCIMB 8052 5293082 YP_001308995.1 CDS glyA NC_009617.1 2164278 2165513 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 2164278..2165513 Clostridium beijerinckii NCIMB 8052 5293083 YP_001308996.1 CDS Cbei_1869 NC_009617.1 2165734 2166249 D PFAM: isochorismatase hydrolase; KEGG: smu:SMU.326 hypothetical protein; isochorismatase hydrolase 2165734..2166249 Clostridium beijerinckii NCIMB 8052 5293084 YP_001308997.1 CDS Cbei_1870 NC_009617.1 2166376 2166624 D hypothetical protein 2166376..2166624 Clostridium beijerinckii NCIMB 8052 5293085 YP_001308998.1 CDS Cbei_1871 NC_009617.1 2166784 2166939 R KEGG: cpf:CPF_1206 hypothetical protein; hypothetical protein complement(2166784..2166939) Clostridium beijerinckii NCIMB 8052 5293086 YP_001308999.1 CDS Cbei_1872 NC_009617.1 2167066 2167557 R hypothetical protein complement(2167066..2167557) Clostridium beijerinckii NCIMB 8052 5293087 YP_001309000.1 CDS Cbei_1873 NC_009617.1 2168120 2170309 D decatenates replicating daughter chromosomes; DNA topoisomerase III 2168120..2170309 Clostridium beijerinckii NCIMB 8052 5293088 YP_001309001.1 CDS Cbei_1874 NC_009617.1 2170486 2171676 D PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: cpf:CPF_2061 D-alanyl-D-alanine carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 2170486..2171676 Clostridium beijerinckii NCIMB 8052 5293089 YP_001309002.1 CDS scpA NC_009617.1 2172071 2172838 D functions during chromosome segregation; may form a condensin-like structure with SMC and ScpB; segregation and condensation protein A 2172071..2172838 Clostridium beijerinckii NCIMB 8052 5293090 YP_001309003.1 CDS scpB NC_009617.1 2172828 2173421 D functions during chromosome segregation; may form a condensin-like structure with SMC and ScpA; forms a homodimer; segregation and condensation protein B 2172828..2173421 Clostridium beijerinckii NCIMB 8052 5293091 YP_001309004.1 CDS Cbei_1877 NC_009617.1 2173588 2174058 R TIGRFAM: Sporulation protein YtfJ; KEGG: cpr:CPR_1772 hypothetical protein; sporulation protein YtfJ complement(2173588..2174058) Clostridium beijerinckii NCIMB 8052 5293092 YP_001309005.1 CDS Cbei_1878 NC_009617.1 2174082 2174624 R KEGG: cpr:CPR_1771 hypothetical protein; hypothetical protein complement(2174082..2174624) Clostridium beijerinckii NCIMB 8052 5293093 YP_001309006.1 CDS Cbei_1879 NC_009617.1 2174766 2175620 D PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; KEGG: cpr:CPR_1770 penicillin-binding protein 5* precursor; serine-type D-Ala-D-Ala carboxypeptidase 2174766..2175620 Clostridium beijerinckii NCIMB 8052 5293094 YP_001309007.1 CDS Cbei_1880 NC_009617.1 2175821 2176810 D KEGG: cpe:CPE1800 hypothetical protein; hypothetical protein 2175821..2176810 Clostridium beijerinckii NCIMB 8052 5293095 YP_001309008.1 CDS Cbei_1881 NC_009617.1 2176807 2178084 D PFAM: glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cpe:CPE1799 hypothetical protein; glucose-inhibited division protein A 2176807..2178084 Clostridium beijerinckii NCIMB 8052 5293096 YP_001309009.1 CDS Cbei_1882 NC_009617.1 2178333 2178737 D KEGG: cpf:CPF_0742 hypothetical protein; hypothetical protein 2178333..2178737 Clostridium beijerinckii NCIMB 8052 5293097 YP_001309010.1 CDS Cbei_1883 NC_009617.1 2178974 2180470 D PFAM: amino acid permease-associated region; KEGG: tte:TTE0446 amino acid transporters; amino acid permease-associated protein 2178974..2180470 Clostridium beijerinckii NCIMB 8052 5293098 YP_001309011.1 CDS Cbei_1884 NC_009617.1 2180550 2181200 D hypothetical protein 2180550..2181200 Clostridium beijerinckii NCIMB 8052 5293099 YP_001309012.1 CDS Cbei_1885 NC_009617.1 2181193 2181591 D PFAM: GntR family transcriptional regulator; KEGG: cno:NT01CX_0244 transcriptional regulator, GntR family; GntR family transcriptional regulator 2181193..2181591 Clostridium beijerinckii NCIMB 8052 5293100 YP_001309013.1 CDS Cbei_1886 NC_009617.1 2181575 2182471 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ctc:CTC01985 ABC transporter ATP-binding protein; ABC transporter 2181575..2182471 Clostridium beijerinckii NCIMB 8052 5293101 YP_001309014.1 CDS Cbei_1887 NC_009617.1 2182452 2183519 D KEGG: cno:NT01CX_0242 membrane spanning protein; hypothetical protein 2182452..2183519 Clostridium beijerinckii NCIMB 8052 5293102 YP_001309015.1 CDS Cbei_1888 NC_009617.1 2183680 2183949 D KEGG: cel:ZK643.8 GRound-Like (grd related); hypothetical protein 2183680..2183949 Clostridium beijerinckii NCIMB 8052 5293103 YP_001309016.1 CDS Cbei_1889 NC_009617.1 2184143 2184853 D PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cpf:CPF_1336 ribosomal small subunit pseudouridine synthase B; pseudouridine synthase 2184143..2184853 Clostridium beijerinckii NCIMB 8052 5293104 YP_001309017.1 CDS Cbei_1890 NC_009617.1 2185079 2185975 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: cpr:CPR_1149 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 2185079..2185975 Clostridium beijerinckii NCIMB 8052 5293105 YP_001309018.1 CDS Cbei_1891 NC_009617.1 2186082 2187413 D PFAM: Polynucleotide adenylyltransferase region; KEGG: ctc:CTC01205 tRNA nucleotidyltransferase (CCA-adding enzyme); tRNA adenylyltransferase 2186082..2187413 Clostridium beijerinckii NCIMB 8052 5293106 YP_001309019.1 CDS Cbei_1892 NC_009617.1 2187680 2188711 D PFAM: domain of unknown function DUF1745; KEGG: ppd:Ppro_3141 domain of unknown function DUF1745; hypothetical protein 2187680..2188711 Clostridium beijerinckii NCIMB 8052 5293107 YP_001309020.1 CDS Cbei_1893 NC_009617.1 2188726 2189685 D PFAM: chemotaxis sensory transducer; KEGG: tma:TM1428 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2188726..2189685 Clostridium beijerinckii NCIMB 8052 5293108 YP_001309021.1 CDS Cbei_1894 NC_009617.1 2189921 2190190 D KEGG: tte:TTE1271 hypothetical protein; hypothetical protein 2189921..2190190 Clostridium beijerinckii NCIMB 8052 5293109 YP_001309022.1 CDS Cbei_1895 NC_009617.1 2190278 2191072 R PFAM: protein of unknown function DUF477; KEGG: ctc:CTC00359 hypothetical protein; hypothetical protein complement(2190278..2191072) Clostridium beijerinckii NCIMB 8052 5293110 YP_001309023.1 CDS Cbei_1896 NC_009617.1 2191069 2191635 R PFAM: LemA family protein; KEGG: ctc:CTC00358 lemA-like protein; LemA family protein complement(2191069..2191635) Clostridium beijerinckii NCIMB 8052 5293111 YP_001309024.1 CDS Cbei_1897 NC_009617.1 2191918 2192838 D PFAM: Mg2+ transporter protein, CorA family protein; KEGG: tde:TDE1034 magnesium and cobalt transporter; Mg2+ transporter protein, CorA family protein 2191918..2192838 Clostridium beijerinckii NCIMB 8052 5293112 YP_001309025.1 CDS Cbei_1898 NC_009617.1 2192916 2193962 R TIGRFAM: calcium/proton antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: cpf:CPF_1624 calcium/proton exchanger; calcium/cation antiporter complement(2192916..2193962) Clostridium beijerinckii NCIMB 8052 5293113 YP_001309026.1 CDS Cbei_1899 NC_009617.1 2194300 2194677 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cpr:CPR_0440 lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase 2194300..2194677 Clostridium beijerinckii NCIMB 8052 5293114 YP_001309027.1 CDS Cbei_1900 NC_009617.1 2194855 2196888 D PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; NTF2 domain protein N-terminal transpeptidase; KEGG: cac:CAC3683 penicillin-binding protein 2 (serine-type D-Ala-D-Ala carboxypeptidase); peptidoglycan glycosyltransferase 2194855..2196888 Clostridium beijerinckii NCIMB 8052 5293115 YP_001309028.1 CDS Cbei_1901 NC_009617.1 2197026 2198375 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; hydrogenase large subunit domain protein; KEGG: cpe:CPE0276 probable hydrogenase; hydrogenase large subunit complement(2197026..2198375) Clostridium beijerinckii NCIMB 8052 5293116 YP_001309029.1 CDS Cbei_1902 NC_009617.1 2198488 2198979 D hypothetical protein 2198488..2198979 Clostridium beijerinckii NCIMB 8052 5293117 YP_001309030.1 CDS Cbei_1903 NC_009617.1 2199060 2199926 R TIGRFAM: ketose-bisphosphate aldolase; fructose-1,6-bisphosphate aldolase, class II; PFAM: ketose-bisphosphate aldolase, class-II; KEGG: cpr:CPR_1350 fructose-1,6-bisphosphate aldolase, class II; fructose-1,6-bisphosphate aldolase complement(2199060..2199926) Clostridium beijerinckii NCIMB 8052 5293118 YP_001309031.1 CDS Cbei_1904 NC_009617.1 2200432 2200929 D PFAM: transcription factor CarD; KEGG: btl:BALH_4288 transcriptional regulator, CarD family; CarD family transcriptional regulator 2200432..2200929 Clostridium beijerinckii NCIMB 8052 5293119 YP_001309032.1 CDS Cbei_1905 NC_009617.1 2201073 2201228 D KEGG: cpf:CPF_2926 hypothetical protein; hypothetical protein 2201073..2201228 Clostridium beijerinckii NCIMB 8052 5293120 YP_001309033.1 CDS Cbei_1907 NC_009617.1 2201777 2202058 D hypothetical protein 2201777..2202058 Clostridium beijerinckii NCIMB 8052 5296355 YP_001309034.1 CDS Cbei_1908 NC_009617.1 2202186 2203586 D KEGG: gka:GK0660 hypothetical protein; hypothetical protein 2202186..2203586 Clostridium beijerinckii NCIMB 8052 5293122 YP_001309035.1 CDS Cbei_1909 NC_009617.1 2203817 2204428 D KEGG: lca:LSEI_0621 predicted membrane protein; hypothetical protein 2203817..2204428 Clostridium beijerinckii NCIMB 8052 5293123 YP_001309036.1 CDS Cbei_1910 NC_009617.1 2204805 2206199 D PFAM: FAD dependent oxidoreductase; KEGG: cno:NT01CX_0904 NAD(FAD)-utilizing dehydrogenase; FAD dependent oxidoreductase 2204805..2206199 Clostridium beijerinckii NCIMB 8052 5293124 YP_001309037.1 CDS Cbei_1911 NC_009617.1 2207254 2207457 D hypothetical protein 2207254..2207457 Clostridium beijerinckii NCIMB 8052 5293125 YP_001309038.1 CDS Cbei_1912 NC_009617.1 2207669 2207842 D hypothetical protein 2207669..2207842 Clostridium beijerinckii NCIMB 8052 5293126 YP_001309039.1 CDS Cbei_1913 NC_009617.1 2207933 2208481 R PFAM: BioY protein; KEGG: ctc:CTC02091 bioY protein; BioY protein complement(2207933..2208481) Clostridium beijerinckii NCIMB 8052 5293127 YP_001309040.1 CDS Cbei_1914 NC_009617.1 2208529 2209479 R KEGG: cpf:CPF_1795 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase complement(2208529..2209479) Clostridium beijerinckii NCIMB 8052 5293128 YP_001309041.1 CDS Cbei_1915 NC_009617.1 2209859 2210323 D KEGG: cpf:CPF_2252 hypothetical protein; hypothetical protein 2209859..2210323 Clostridium beijerinckii NCIMB 8052 5293129 YP_001309042.1 CDS Cbei_1916 NC_009617.1 2210489 2211166 D PFAM: protein of unknown function DUF541; KEGG: ctc:CTC01814 periplasmic immunogenic protein; hypothetical protein 2210489..2211166 Clostridium beijerinckii NCIMB 8052 5293130 YP_001309043.1 CDS murQ NC_009617.1 2211859 2212773 D catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase 2211859..2212773 Clostridium beijerinckii NCIMB 8052 5293131 YP_001309044.1 CDS Cbei_1918 NC_009617.1 2212788 2214149 D PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: stm:STM2570 PTS system, sucrose-specific IIBC component; phosphotransferase system, EIIC 2212788..2214149 Clostridium beijerinckii NCIMB 8052 5293132 YP_001309045.1 CDS Cbei_1919 NC_009617.1 2214292 2215365 D PFAM: protein of unknown function DUF871; KEGG: bca:BCE_0915 hypothetical protein; hypothetical protein 2214292..2215365 Clostridium beijerinckii NCIMB 8052 5293133 YP_001309046.1 CDS Cbei_1920 NC_009617.1 2215404 2216249 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: tte:TTE0211 transcriptional regulator; RpiR family transcriptional regulator 2215404..2216249 Clostridium beijerinckii NCIMB 8052 5293134 YP_001309047.1 CDS Cbei_1921 NC_009617.1 2216753 2217631 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pau:PA14_03830 N-carbamoylputrescine amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(2216753..2217631) Clostridium beijerinckii NCIMB 8052 5293135 YP_001309048.1 CDS Cbei_1922 NC_009617.1 2217654 2218697 R PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: lpf:lpl0005 hypothetical protein; agmatine deiminase complement(2217654..2218697) Clostridium beijerinckii NCIMB 8052 5293136 YP_001309049.1 CDS Cbei_1923 NC_009617.1 2219030 2220235 D PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BG10025 similar to antibiotic resistance protein; major facilitator superfamily transporter 2219030..2220235 Clostridium beijerinckii NCIMB 8052 5293137 YP_001309050.1 CDS Cbei_1924 NC_009617.1 2221007 2222644 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 2221007..2222644 Clostridium beijerinckii NCIMB 8052 5296356 YP_001309051.1 CDS Cbei_1925 NC_009617.1 2222695 2223213 R KEGG: cac:CAC0207 hypothetical protein, CF-6 family; hypothetical protein complement(2222695..2223213) Clostridium beijerinckii NCIMB 8052 5293139 YP_001309052.1 CDS Cbei_1926 NC_009617.1 2223480 2224025 R PFAM: transcriptional regulator PadR family protein; KEGG: cac:CAC3370 predicted transcriptional regulator; PadR-like family transcriptional regulator complement(2223480..2224025) Clostridium beijerinckii NCIMB 8052 5293140 YP_001309053.1 CDS Cbei_1927 NC_009617.1 2224235 2226229 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cac:CAC3371 2-enoate reductase (two distinct NAD(FAD)-dependent dehydrogenase domains); NADH:flavin oxidoreductase 2224235..2226229 Clostridium beijerinckii NCIMB 8052 5293141 YP_001309054.1 CDS Cbei_1928 NC_009617.1 2226825 2227610 D KEGG: cth:Cthe_1219 hypothetical protein; hypothetical protein 2226825..2227610 Clostridium beijerinckii NCIMB 8052 5293142 YP_001309055.1 CDS Cbei_1929 NC_009617.1 2227645 2229132 R PFAM: protein kinase; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; KEGG: ctc:CTC01225 serine/threonine protein kinase; protein kinase complement(2227645..2229132) Clostridium beijerinckii NCIMB 8052 5293143 YP_001309056.1 CDS Cbei_1930 NC_009617.1 2229556 2229924 D KEGG: ctc:CTC00548 hypothetical protein; hypothetical protein 2229556..2229924 Clostridium beijerinckii NCIMB 8052 5293144 YP_001309057.1 CDS Cbei_1931 NC_009617.1 2230091 2230549 D KEGG: cac:CAC0803 hypothetical protein; hypothetical protein 2230091..2230549 Clostridium beijerinckii NCIMB 8052 5293145 YP_001309058.1 CDS Cbei_1932 NC_009617.1 2230915 2232093 D PFAM: iron-containing alcohol dehydrogenase; KEGG: msu:MS0883 hypothetical protein; iron-containing alcohol dehydrogenase 2230915..2232093 Clostridium beijerinckii NCIMB 8052 5293146 YP_001309059.1 CDS Cbei_1933 NC_009617.1 2232294 2233571 D PFAM: glucose-inhibited division protein A; HI0933 family protein; KEGG: ctc:CTC01382 hypothetical protein; glucose-inhibited division protein A 2232294..2233571 Clostridium beijerinckii NCIMB 8052 5293147 YP_001309060.1 CDS Cbei_1934 NC_009617.1 2233848 2234207 D hypothetical protein 2233848..2234207 Clostridium beijerinckii NCIMB 8052 5293148 YP_001309061.1 CDS Cbei_1935 NC_009617.1 2234469 2235623 D PFAM: purine catabolism PurC domain protein; KEGG: cac:CAC1426 possible transcriptional regulator from leucine-rich protein (LRPR) family; PucR family transcriptional regulator 2234469..2235623 Clostridium beijerinckii NCIMB 8052 5293149 YP_001309062.1 CDS Cbei_1936 NC_009617.1 2235811 2237136 D PFAM: aminotransferase class-III; KEGG: rha:RHA1_ro04469 4-aminobutyrate transaminase; class III aminotransferase 2235811..2237136 Clostridium beijerinckii NCIMB 8052 5293150 YP_001309063.1 CDS Cbei_1937 NC_009617.1 2237150 2238301 D PFAM: iron-containing alcohol dehydrogenase; KEGG: cpf:CPF_0080 alcohol dehydrogenase, iron-containing; iron-containing alcohol dehydrogenase 2237150..2238301 Clostridium beijerinckii NCIMB 8052 5293151 YP_001309064.1 CDS Cbei_1938 NC_009617.1 2238374 2239207 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rle:RL3720 ATP-binding component of ABC transporter; ABC transporter 2238374..2239207 Clostridium beijerinckii NCIMB 8052 5293152 YP_001309065.1 CDS Cbei_1939 NC_009617.1 2239210 2239986 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_128GM hypothetical protein; binding-protein-dependent transport system inner membrane protein 2239210..2239986 Clostridium beijerinckii NCIMB 8052 5293153 YP_001309066.1 CDS Cbei_1940 NC_009617.1 2239999 2240766 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_3097 ABC transporter permease; binding-protein-dependent transport system inner membrane protein 2239999..2240766 Clostridium beijerinckii NCIMB 8052 5293154 YP_001309067.1 CDS Cbei_1941 NC_009617.1 2240922 2241983 D PFAM: NMT1/THI5 like; KEGG: fal:FRAAL1422 ABC transporter substrate binding protein; NMT1/THI5-like protein 2240922..2241983 Clostridium beijerinckii NCIMB 8052 5293155 YP_001309068.1 CDS Cbei_1942 NC_009617.1 2242224 2243591 D TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: ehi:189.t00008 D-hydantoinase; dihydropyrimidinase 2242224..2243591 Clostridium beijerinckii NCIMB 8052 5293156 YP_001309069.1 CDS Cbei_1943 NC_009617.1 2243681 2245234 D catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines; dihydropyrimidine dehydrogenase 2243681..2245234 Clostridium beijerinckii NCIMB 8052 5293157 YP_001309070.1 CDS Cbei_1944 NC_009617.1 2245267 2246487 D allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 2245267..2246487 Clostridium beijerinckii NCIMB 8052 5293158 YP_001309071.1 CDS Cbei_1945 NC_009617.1 2246597 2247031 R PFAM: CBS domain containing protein; KEGG: ctc:CTC00347 inosine-5-monophosphate dehydrogenase related protein; signal-transduction protein complement(2246597..2247031) Clostridium beijerinckii NCIMB 8052 5293159 YP_001309072.1 CDS Cbei_1946 NC_009617.1 2247312 2248268 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: ppd:Ppro_1810 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 2247312..2248268 Clostridium beijerinckii NCIMB 8052 5293160 YP_001309073.1 CDS Cbei_1947 NC_009617.1 2248425 2249249 R KEGG: art:Arth_1808 Zn-dependent hydrolases of the beta-lactamase fold-like protein; beta-lactamase fold-like Zn-dependent hydrolase complement(2248425..2249249) Clostridium beijerinckii NCIMB 8052 5293161 YP_001309074.1 CDS Cbei_1948 NC_009617.1 2249404 2249967 D KEGG: cth:Cthe_2999 hypothetical protein; hypothetical protein 2249404..2249967 Clostridium beijerinckii NCIMB 8052 5293162 YP_001309075.1 CDS Cbei_1949 NC_009617.1 2250460 2251107 D KEGG: rpa:RPA1434 hypothetical protein; hypothetical protein 2250460..2251107 Clostridium beijerinckii NCIMB 8052 5293163 YP_001309076.1 CDS Cbei_1950 NC_009617.1 2251153 2252718 D KEGG: dsy:DSY3734 hypothetical protein; hypothetical protein 2251153..2252718 Clostridium beijerinckii NCIMB 8052 5293164 YP_001309077.1 CDS Cbei_1951 NC_009617.1 2252940 2254043 D KEGG: lin:lin1229 hypothetical protein; hypothetical protein 2252940..2254043 Clostridium beijerinckii NCIMB 8052 5293165 YP_001309078.1 CDS Cbei_1952 NC_009617.1 2260171 2261739 D KEGG: pfa:PFL0350c hypothetical protein; hypothetical protein 2260171..2261739 Clostridium beijerinckii NCIMB 8052 5296360 YP_001309079.1 CDS Cbei_1953 NC_009617.1 2261830 2263230 D PFAM: aldehyde dehydrogenase; KEGG: sav:SAV1920 aldehyde dehydrogenase; aldehyde dehydrogenase 2261830..2263230 Clostridium beijerinckii NCIMB 8052 5293167 YP_001309080.1 CDS Cbei_1954 NC_009617.1 2263415 2264584 R PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC0560 integral membrane protein similar to antibiotic resistance protein B.subtilis; major facilitator superfamily transporter complement(2263415..2264584) Clostridium beijerinckii NCIMB 8052 5293168 YP_001309081.1 CDS Cbei_1955 NC_009617.1 2264666 2265109 R PFAM: regulatory protein, MarR; Helix-turn-helix, type 11 domain protein; KEGG: cac:CAC0559 transcriptional regulator, MarR/EmrR family; MarR family transcriptional regulator complement(2264666..2265109) Clostridium beijerinckii NCIMB 8052 5293169 YP_001309082.1 CDS Cbei_1956 NC_009617.1 2265316 2265792 D KEGG: cac:CAC0275 hypothetical protein; hypothetical protein 2265316..2265792 Clostridium beijerinckii NCIMB 8052 5293170 YP_001309083.1 CDS Cbei_1957 NC_009617.1 2271363 2271776 D PFAM: thioesterase superfamily protein; KEGG: cth:Cthe_1260 4-hydroxybenzoyl-CoA thioesterase; thioesterase superfamily protein 2271363..2271776 Clostridium beijerinckii NCIMB 8052 5296364 YP_001309084.1 CDS Cbei_1958 NC_009617.1 2271851 2272357 R KEGG: dsy:DSY1430 hypothetical protein; hypothetical protein complement(2271851..2272357) Clostridium beijerinckii NCIMB 8052 5293172 YP_001309085.1 CDS Cbei_1959 NC_009617.1 2272464 2273345 R PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: ctc:CTC00153 transcriptional regulatory protein; LysR family transcriptional regulator complement(2272464..2273345) Clostridium beijerinckii NCIMB 8052 5293173 YP_001309086.1 CDS Cbei_1960 NC_009617.1 2273478 2274401 D PFAM: Ketopantoate reductase ApbA/PanE, N-terminal domain protein; Ketopantoate reductase ApbA/PanE, C-terminal domain protein; KEGG: sfu:Sfum_1736 2-dehydropantoate 2-reductase; 2-dehydropantoate 2-reductase 2273478..2274401 Clostridium beijerinckii NCIMB 8052 5293174 YP_001309087.1 CDS Cbei_1961 NC_009617.1 2274613 2275395 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: tte:TTE0069 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short-chain dehydrogenase/reductase SDR 2274613..2275395 Clostridium beijerinckii NCIMB 8052 5293175 YP_001309088.1 CDS Cbei_1962 NC_009617.1 2275561 2276193 D TIGRFAM: Sporulation stage II, protein M; PFAM: protein of unknown function DUF95, transmembrane; KEGG: cac:CAC2068 sporulation factor SpoIIM, uncharacterized membrane protein; sporulation stage II, protein M 2275561..2276193 Clostridium beijerinckii NCIMB 8052 5293176 YP_001309089.1 CDS Cbei_1963 NC_009617.1 2276276 2277154 D PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: cpf:CPF_2063 tyrosine recombinase XerD; phage integrase family protein 2276276..2277154 Clostridium beijerinckii NCIMB 8052 5293177 YP_001309090.1 CDS Cbei_1964 NC_009617.1 2279037 2279981 D PFAM: polysaccharide deacetylase; KEGG: cpf:CPF_0823 polysaccharide deacetylase family protein; polysaccharide deacetylase 2279037..2279981 Clostridium beijerinckii NCIMB 8052 5293178 YP_001309091.1 CDS Cbei_1965 NC_009617.1 2280188 2281237 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ava:Ava_0243 molybdate ABC transporter permease; ABC transporter complement(2280188..2281237) Clostridium beijerinckii NCIMB 8052 5293179 YP_001309092.1 CDS Cbei_1966 NC_009617.1 2281237 2281914 R TIGRFAM: molybdate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ter:Tery_4148 molybdate ABC transporter inner membrane subunit; molybdate ABC transporter inner membrane subunit complement(2281237..2281914) Clostridium beijerinckii NCIMB 8052 5293180 YP_001309093.1 CDS Cbei_1967 NC_009617.1 2282473 2283783 D Zn-dependent extracellular dipeptidase; similar to succinyl-diaminopimelate desuccinylases; peptidase 2282473..2283783 Clostridium beijerinckii NCIMB 8052 5293181 YP_001309094.1 CDS Cbei_1968 NC_009617.1 2283820 2285013 D PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; KEGG: efa:EF2577 ornithine carbamoyltransferase; aspartate/ornithine carbamoyltransferase family protein 2283820..2285013 Clostridium beijerinckii NCIMB 8052 5293182 YP_001309095.1 CDS Cbei_1969 NC_009617.1 2285184 2286104 D catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 2285184..2286104 Clostridium beijerinckii NCIMB 8052 5293183 YP_001309096.1 CDS Cbei_1970 NC_009617.1 2286761 2288137 D catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; phenylhydantoinase 2286761..2288137 Clostridium beijerinckii NCIMB 8052 5293184 YP_001309097.1 CDS Cbei_1971 NC_009617.1 2288264 2288905 D PFAM: YheO domain protein; KEGG: efa:EF2583 hypothetical protein; YheO domain-containing protein 2288264..2288905 Clostridium beijerinckii NCIMB 8052 5293185 YP_001309098.1 CDS Cbei_1972 NC_009617.1 2289310 2290593 D TIGRFAM: Guanine deaminase; PFAM: amidohydrolase; KEGG: cac:CAC0282 cytosine/guanine deaminase related protein; guanine deaminase 2289310..2290593 Clostridium beijerinckii NCIMB 8052 5293186 YP_001309099.1 CDS Cbei_1973 NC_009617.1 2290750 2293767 D with YgfM and YgfN forms a selenate reductase, which seems to catalyze the reduction of selenate to selenite; YgfK mutants are unable to reduce selenate; involved in purine salvage process; seems to act as an oxidoreductase, but sequence similarity suggests it is a dihydrothymine dehydrogenase; selenate reductase subunit YgfK 2290750..2293767 Clostridium beijerinckii NCIMB 8052 5293187 YP_001309100.1 CDS Cbei_1974 NC_009617.1 2293929 2295353 D PFAM: Xanthine/uracil/vitamin C permease; KEGG: cno:NT01CX_2417 guanine-hypoxanthine permease; xanthine/uracil/vitamin C permease 2293929..2295353 Clostridium beijerinckii NCIMB 8052 5293188 YP_001309101.1 CDS Cbei_1975 NC_009617.1 2295746 2297452 D TIGRFAM: adenine deaminase; PFAM: amidohydrolase; KEGG: cac:CAC0887 adenine deaminase; adenine deaminase 2295746..2297452 Clostridium beijerinckii NCIMB 8052 5293189 YP_001309102.1 CDS Cbei_1976 NC_009617.1 2297480 2298091 D PFAM: regulatory protein, TetR; KEGG: dsy:DSY1100 hypothetical protein; TetR family transcriptional regulator 2297480..2298091 Clostridium beijerinckii NCIMB 8052 5293190 YP_001309103.1 CDS Cbei_1977 NC_009617.1 2298138 2299340 D catalyzes the formation of pyruvate from 2,3-diaminopropionate; diaminopropionate ammonia-lyase 2298138..2299340 Clostridium beijerinckii NCIMB 8052 5293191 YP_001309104.1 CDS Cbei_1978 NC_009617.1 2299624 2300952 D in Escherichia coli expression is induced in response to phase-specific signals and controlled by RpoS; chlorohydrolase/aminohydrolase 2299624..2300952 Clostridium beijerinckii NCIMB 8052 5293192 YP_001309105.1 CDS Cbei_1979 NC_009617.1 2301037 2301414 D TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: cpr:CPR_1089 endoribonuclease L-PSP; endoribonuclease L-PSP 2301037..2301414 Clostridium beijerinckii NCIMB 8052 5293193 YP_001309106.1 CDS Cbei_1980 NC_009617.1 2301495 2302562 D PFAM: protein of unknown function DUF182; KEGG: ctc:CTC01880 alcohol dehydrogenase [cytochrome c-553], gamma chain-like protein; hypothetical protein 2301495..2302562 Clostridium beijerinckii NCIMB 8052 5293194 YP_001309107.1 CDS Cbei_1981 NC_009617.1 2302618 2303964 D TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: bld:BLi02347 xanthine permease; RBL01134; uracil-xanthine permease 2302618..2303964 Clostridium beijerinckii NCIMB 8052 5293195 YP_001309108.1 CDS Cbei_1982 NC_009617.1 2304390 2306957 D PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: efa:EF2570 aldehyde oxidoreductase; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit 2304390..2306957 Clostridium beijerinckii NCIMB 8052 5293196 YP_001309109.1 CDS Cbei_1983 NC_009617.1 2307010 2307621 D KEGG: dsy:DSY1981 hypothetical protein; hypothetical protein 2307010..2307621 Clostridium beijerinckii NCIMB 8052 5293197 YP_001309110.1 CDS Cbei_1984 NC_009617.1 2307752 2309866 D PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: ppd:Ppro_1446 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; xanthine dehydrogenase 2307752..2309866 Clostridium beijerinckii NCIMB 8052 5293198 YP_001309111.1 CDS Cbei_1985 NC_009617.1 2309866 2310333 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: ppd:Ppro_1445 (2Fe-2S)-binding domain protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein 2309866..2310333 Clostridium beijerinckii NCIMB 8052 5293199 YP_001309112.1 CDS Cbei_1986 NC_009617.1 2310327 2311145 D PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: swo:Swol_1137 conserved hypothetical dehydrogenase; FAD-binding molybdopterin dehydrogenase 2310327..2311145 Clostridium beijerinckii NCIMB 8052 5293200 YP_001309113.1 CDS Cbei_1987 NC_009617.1 2311566 2312495 D PFAM: LysR family transcriptional regulator; KEGG: swo:Swol_1816 hypothetical protein; LysR family transcriptional regulator 2311566..2312495 Clostridium beijerinckii NCIMB 8052 5293201 YP_001309114.1 CDS Cbei_1988 NC_009617.1 2312703 2313722 D PFAM: molybdopterin binding domain; KEGG: cpf:CPF_2046 molybdenum cofactor biosynthesis protein; molybdopterin binding domain-containing protein 2312703..2313722 Clostridium beijerinckii NCIMB 8052 5293202 YP_001309115.1 CDS Cbei_1989 NC_009617.1 2313892 2314866 D TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cpe:CPE1790 molybdenum cofactor biosynthesis protein A; molybdenum cofactor biosynthesis protein A 2313892..2314866 Clostridium beijerinckii NCIMB 8052 5293203 YP_001309116.1 CDS moaC NC_009617.1 2314946 2315425 D MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 2314946..2315425 Clostridium beijerinckii NCIMB 8052 5293204 YP_001309117.1 CDS Cbei_1991 NC_009617.1 2315425 2315856 D PFAM: MOSC domain containing protein; KEGG: cac:CAC1991 uncharacterized protein, YIIM family; MOSC domain-containing protein 2315425..2315856 Clostridium beijerinckii NCIMB 8052 5293205 YP_001309118.1 CDS Cbei_1992 NC_009617.1 2315913 2316716 R TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: ter:Tery_4147 molybdenum ABC transporter periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein complement(2315913..2316716) Clostridium beijerinckii NCIMB 8052 5293206 YP_001309119.1 CDS Cbei_1993 NC_009617.1 2317350 2317556 D PFAM: TOBE domain protein; KEGG: hit:NTHI1793 probable molybdenum-pterin binding protein; TOBE domain-containing protein 2317350..2317556 Clostridium beijerinckii NCIMB 8052 5293207 YP_001309120.1 CDS Cbei_1994 NC_009617.1 2317881 2319398 D PFAM: ABC transporter; cobalamin synthesis protein, P47K; SMART: ATPase AAA; KEGG: swo:Swol_2095 hypothetical protein; ABC transporter 2317881..2319398 Clostridium beijerinckii NCIMB 8052 5293208 YP_001309121.1 CDS Cbei_1995 NC_009617.1 2319609 2320571 D KEGG: ppd:Ppro_0344 hypothetical protein; hypothetical protein 2319609..2320571 Clostridium beijerinckii NCIMB 8052 5293209 YP_001309122.1 CDS Cbei_1996 NC_009617.1 2320633 2321598 D TIGRFAM: DNA binding domain, excisionase family; KEGG: cac:CAC0252 molybdate-binding protein; DNA binding domain-containing protein 2320633..2321598 Clostridium beijerinckii NCIMB 8052 5293210 YP_001309123.1 CDS Cbei_1997 NC_009617.1 2321755 2322363 D KEGG: mba:Mbar_A2471 hypothetical protein; hypothetical protein 2321755..2322363 Clostridium beijerinckii NCIMB 8052 5293211 YP_001309124.1 CDS Cbei_1998 NC_009617.1 2322356 2323330 D KEGG: cac:CAC3660 uncharacterized protein, homolog of Desulfovibrio gigas (gi:6978031); hypothetical protein 2322356..2323330 Clostridium beijerinckii NCIMB 8052 5293212 YP_001309125.1 CDS Cbei_1999 NC_009617.1 2323975 2324796 D TIGRFAM: nitrogenase iron protein; PFAM: NifH/frxC-family protein; KEGG: cac:CAC0253 nitrogenase iron protein (nitrogenase component II) gene nifH; nitrogenase iron protein 2323975..2324796 Clostridium beijerinckii NCIMB 8052 5293213 YP_001309126.1 CDS Cbei_2000 NC_009617.1 2325086 2325412 D PFAM: nitrogen regulatory protein P-II; KEGG: cac:CAC0254 nitrogen regulatory protein PII (nitrogen fixation nifHD); nitrogen regulatory protein P-II 2325086..2325412 Clostridium beijerinckii NCIMB 8052 5293214 YP_001309127.1 CDS Cbei_2001 NC_009617.1 2325437 2325820 D PFAM: nitrogen regulatory protein P-II; KEGG: cac:CAC0255 nitrogen regulatory protein PII (nitrogen fixation nifHD); nitrogen regulatory protein P-II 2325437..2325820 Clostridium beijerinckii NCIMB 8052 5293215 YP_001309128.1 CDS Cbei_2002 NC_009617.1 2325839 2327425 D TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase, component 1; KEGG: cac:CAC0256 nitrogenase molybdenum-iron protein, alpha chain (nitrogenase component I) gene nifD; nitrogenase molybdenum-iron protein subunit alpha 2325839..2327425 Clostridium beijerinckii NCIMB 8052 5293216 YP_001309129.1 CDS Cbei_2003 NC_009617.1 2327425 2328789 D TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase, component 1; KEGG: cac:CAC0257 nitrogenase molibdenum-iron protein, beta chain, gene nifK; nitrogenase molybdenum-iron protein subunit beta 2327425..2328789 Clostridium beijerinckii NCIMB 8052 5293217 YP_001309130.1 CDS Cbei_2004 NC_009617.1 2329971 2331335 D TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase, component 1; KEGG: cac:CAC0258 nitrogenase iron-molibdenum cofactor biosinthesis protein, gene nifE; nitrogenase MoFe cofactor biosynthesis protein NifE 2329971..2331335 Clostridium beijerinckii NCIMB 8052 5293218 YP_001309131.1 CDS Cbei_2005 NC_009617.1 2331322 2334012 D KEGG: cac:CAC0259 fusion nifN/K+nifB (nifN-nitrogenase iron molybdenum cofactor biosinthesis protein, nifK-nitrogenase molibdenum-iron protein beta chain, nifB-nitrogenase iron-molibdenum cofactor biosynthesis protein); TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: oxidoreductase/nitrogenase, component 1; Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; nitrogenase cofactor biosynthesis protein NifB 2331322..2334012 Clostridium beijerinckii NCIMB 8052 5293219 YP_001309132.1 CDS Cbei_2006 NC_009617.1 2334338 2334646 D KEGG: mgm:Mmc1_0047 ferredoxin, 2Fe-2S; ferredoxin, 2Fe-2S 2334338..2334646 Clostridium beijerinckii NCIMB 8052 5293220 YP_001309133.1 CDS Cbei_2007 NC_009617.1 2335016 2336185 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cac:CAC2796 MoaA/NirJ family Fe-S oxidoreductase; radical SAM domain-containing protein 2335016..2336185 Clostridium beijerinckii NCIMB 8052 5293221 YP_001309134.1 CDS Cbei_2008 NC_009617.1 2336229 2337218 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: chy:CHY_1211 radical SAM domain protein; radical SAM domain-containing protein 2336229..2337218 Clostridium beijerinckii NCIMB 8052 5293222 YP_001309135.1 CDS Cbei_2009 NC_009617.1 2337270 2337737 D SMART: regulatory protein, AsnC/Lrp family; KEGG: mta:Moth_2198 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 2337270..2337737 Clostridium beijerinckii NCIMB 8052 5293223 YP_001309136.1 CDS Cbei_2010 NC_009617.1 2337730 2338197 D KEGG: cac:CAC2793 transcriptional regulator, Lrp family (possible nitrite reductase regulator NirD); AsnC family transcriptional regulator 2337730..2338197 Clostridium beijerinckii NCIMB 8052 5293224 YP_001309137.1 CDS Cbei_2011 NC_009617.1 2338415 2339329 D KEGG: cac:CAC0260 homocitrate synthase, omega subunit nifV (nivO); isopropylmalate/homocitrate/citramalate synthase-like protein 2338415..2339329 Clostridium beijerinckii NCIMB 8052 5293225 YP_001309138.1 CDS Cbei_2012 NC_009617.1 2339351 2340133 D PFAM: pyruvate carboxyltransferase; KEGG: cac:CAC0261 homocitrate synthase,alpha subunit nifV(nioA); homocitrate synthase 2339351..2340133 Clostridium beijerinckii NCIMB 8052 5293226 YP_001309139.1 CDS Cbei_2013 NC_009617.1 2340972 2341391 D PFAM: DNA polymerase, beta domain protein region; KEGG: mja:MJ0126 hypothetical protein; DNA polymerase subunit beta 2340972..2341391 Clostridium beijerinckii NCIMB 8052 5293227 YP_001309140.1 CDS Cbei_2014 NC_009617.1 2341388 2341816 D hypothetical protein 2341388..2341816 Clostridium beijerinckii NCIMB 8052 5293228 YP_001309141.1 CDS Cbei_2015 NC_009617.1 2341829 2344759 D PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; helicase c2; DEAD-like helicases-like; KEGG: dsy:DSY1872 hypothetical protein; exonuclease 2341829..2344759 Clostridium beijerinckii NCIMB 8052 5293229 YP_001309142.1 CDS Cbei_2016 NC_009617.1 2345282 2345446 D KEGG: cpr:CPR_2321 hypothetical protein; hypothetical protein 2345282..2345446 Clostridium beijerinckii NCIMB 8052 5293230 YP_001309143.1 CDS Cbei_2017 NC_009617.1 2345681 2346532 R PFAM: Patatin; KEGG: sha:SH2556 hypothetical protein; patatin complement(2345681..2346532) Clostridium beijerinckii NCIMB 8052 5293231 YP_001309144.1 CDS Cbei_2018 NC_009617.1 2346637 2347029 D PFAM: regulatory protein, MerR; KEGG: bha:BH3858 transcriptional regulator (MerR family); MerR family transcriptional regulator 2346637..2347029 Clostridium beijerinckii NCIMB 8052 5293232 YP_001309145.1 CDS Cbei_2019 NC_009617.1 2347463 2347813 R KEGG: spd:SPD_1327 bacterocin transport accessory protein; bacterocin transport accessory protein complement(2347463..2347813) Clostridium beijerinckii NCIMB 8052 5293233 YP_001309146.1 CDS Cbei_2020 NC_009617.1 2348326 2348637 D KEGG: tde:TDE2752 hypothetical protein; hypothetical protein 2348326..2348637 Clostridium beijerinckii NCIMB 8052 5293234 YP_001309147.1 CDS Cbei_2021 NC_009617.1 2348986 2350956 D KEGG: cno:NT01CX_2411 hypothetical protein; hypothetical protein 2348986..2350956 Clostridium beijerinckii NCIMB 8052 5293235 YP_001309148.1 CDS Cbei_2022 NC_009617.1 2351380 2352090 D PFAM: protein of unknown function DUF542, ScdA domain protein; Hemerythrin HHE cation binding domain protein; KEGG: cac:CAC0071 uncharacterized conserved protein, YtfE E.coli ortholog; hypothetical protein 2351380..2352090 Clostridium beijerinckii NCIMB 8052 5293236 YP_001309149.1 CDS Cbei_2023 NC_009617.1 2352623 2352895 D KEGG: dsy:DSY1202 hypothetical protein; hypothetical protein 2352623..2352895 Clostridium beijerinckii NCIMB 8052 5293237 YP_001309150.1 CDS Cbei_2024 NC_009617.1 2353495 2354292 D PFAM: DNA polymerase, beta domain protein region; KEGG: vfi:VF1334 oxalate/formate antiporter; DNA polymerase subunit beta 2353495..2354292 Clostridium beijerinckii NCIMB 8052 5293238 YP_001309151.1 CDS Cbei_2026 NC_009617.1 2355110 2355454 D KEGG: cac:CAC3679 uncharacterized protein of kdp operon, KdpX; hypothetical protein 2355110..2355454 Clostridium beijerinckii NCIMB 8052 5296365 YP_001309152.1 CDS Cbei_2027 NC_009617.1 2355662 2358247 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Osmosensitive K+ channel His kinase sensor; UspA domain protein; KEGG: cac:CAC3678 sensor protein KdpD (ATPase containing sensor domain and histidine kinase domain); osmosensitive K+ channel signal transduction histidine kinase 2355662..2358247 Clostridium beijerinckii NCIMB 8052 5293240 YP_001309153.1 CDS Cbei_2028 NC_009617.1 2358237 2358935 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cac:CAC3677 KDP operon transcriptional regulatory protein KdpE (CheY-like receiver domain and HTH-type DNA-binding domain); two component transcriptional regulator 2358237..2358935 Clostridium beijerinckii NCIMB 8052 5293241 YP_001309154.1 CDS Cbei_2029 NC_009617.1 2359063 2361066 D PFAM: K+ potassium transporter; KEGG: cpf:CPF_1235 potassium transporter; K+ potassium transporter 2359063..2361066 Clostridium beijerinckii NCIMB 8052 5293242 YP_001309155.1 CDS Cbei_2030 NC_009617.1 2361344 2361838 D PFAM: transposase IS3/IS911 family protein; KEGG: pcr:Pcryo_2438 transposase IS3/IS911; transposase IS3/IS911 family protein 2361344..2361838 Clostridium beijerinckii NCIMB 8052 5293243 YP_001309156.1 CDS Cbei_2031 NC_009617.1 2362099 2362701 D PFAM: Integrase, catalytic region; KEGG: bce:BC5180 transposase; integrase catalytic subunit 2362099..2362701 Clostridium beijerinckii NCIMB 8052 5293244 YP_001309157.1 CDS Cbei_2033 NC_009617.1 2363214 2363573 D hypothetical protein 2363214..2363573 Clostridium beijerinckii NCIMB 8052 5296366 YP_001309158.1 CDS Cbei_2034 NC_009617.1 2363994 2364779 D catalyzes the formation of crotonoyl-CoA from (3R)-3-hydroxybutanoyl-CoA; 3-hydroxybutyryl-CoA dehydratase 2363994..2364779 Clostridium beijerinckii NCIMB 8052 5293246 YP_001309159.1 CDS Cbei_2035 NC_009617.1 2364854 2365993 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: cpr:CPR_2286 butyryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 2364854..2365993 Clostridium beijerinckii NCIMB 8052 5293247 YP_001309160.1 CDS Cbei_2036 NC_009617.1 2366007 2366786 D PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; KEGG: cpe:CPE2299 electron transfer flavoprotein beta subunit; electron transfer flavoprotein, alpha/beta-subunit-like protein 2366007..2366786 Clostridium beijerinckii NCIMB 8052 5293248 YP_001309161.1 CDS Cbei_2037 NC_009617.1 2366809 2367816 D PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; Electron transfer flavoprotein, alpha subunit-like; KEGG: cpr:CPR_2284 3-hydroxybutyryl-CoA dehydrogenase; electron transfer flavoprotein, alpha/beta-subunit-like protein 2366809..2367816 Clostridium beijerinckii NCIMB 8052 5293249 YP_001309162.1 CDS Cbei_2038 NC_009617.1 2367889 2368314 D PFAM: MaoC domain protein dehydratase; KEGG: ctc:CTC00706 (de)hydratase mit MaoC domain; dehydratase 2367889..2368314 Clostridium beijerinckii NCIMB 8052 5293250 YP_001309163.1 CDS Cbei_2039 NC_009617.1 2368633 2370339 D TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; PAS fold domain protein; SMART: PAS domain containing protein; ATPase AAA; KEGG: ctc:CTC00707 transcriptional regulatory protein; sigma-54 dependent trancsriptional regulator 2368633..2370339 Clostridium beijerinckii NCIMB 8052 5293251 YP_001309164.1 CDS Cbei_2040 NC_009617.1 2370773 2372329 D PFAM: coenzyme A transferase; KEGG: ctc:CTC00708 acetyl-coA:acetoacetyl-coA transferase alpha subunit; coenzyme A transferase 2370773..2372329 Clostridium beijerinckii NCIMB 8052 5293252 YP_001309165.1 CDS Cbei_2041 NC_009617.1 2372518 2373912 D PFAM: Gluconate transporter; Citrate transporter; KEGG: ctc:CTC00709 integral membrane permease; citrate transporter 2372518..2373912 Clostridium beijerinckii NCIMB 8052 5293253 YP_001309166.1 CDS Cbei_2042 NC_009617.1 2374977 2375852 D PFAM: helix-turn-helix- domain containing protein, AraC type; transcription activator, effector binding; KEGG: bsu:BG12132 similar to transcriptional regulator (AraC/XylS family); transcription activator, effector binding 2374977..2375852 Clostridium beijerinckii NCIMB 8052 5293254 YP_001309167.1 CDS Cbei_2043 NC_009617.1 2376998 2377777 D KEGG: swo:Swol_0978 hypothetical protein; hypothetical protein 2376998..2377777 Clostridium beijerinckii NCIMB 8052 5293255 YP_001309168.1 CDS Cbei_2044 NC_009617.1 2377887 2378078 D KEGG: pin:Ping_1432 hypothetical protein; hypothetical protein 2377887..2378078 Clostridium beijerinckii NCIMB 8052 5293256 YP_001309169.1 CDS Cbei_2045 NC_009617.1 2378460 2380886 D SMART: ATPase AAA; KEGG: hne:HNE_0284 hypothetical protein; ATPase AAA 2378460..2380886 Clostridium beijerinckii NCIMB 8052 5293257 YP_001309170.1 CDS Cbei_2046 NC_009617.1 2381227 2382684 R KEGG: tte:TTE2242 transposase; transposase complement(2381227..2382684) Clostridium beijerinckii NCIMB 8052 5293258 YP_001309171.1 CDS Cbei_2047 NC_009617.1 2382993 2383670 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: oih:OB0357 two-component response regulator; two component transcriptional regulator 2382993..2383670 Clostridium beijerinckii NCIMB 8052 5293259 YP_001309172.1 CDS Cbei_2048 NC_009617.1 2383672 2384673 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: oih:OB0358 two-component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 2383672..2384673 Clostridium beijerinckii NCIMB 8052 5293260 YP_001309173.1 CDS Cbei_2049 NC_009617.1 2384782 2385492 D PFAM: SMC domain protein; ABC transporter; SMART: ATPase AAA; KEGG: oih:OB0359 ABC transporter ATP-binding protein; ABC transporter 2384782..2385492 Clostridium beijerinckii NCIMB 8052 5293261 YP_001309174.1 CDS Cbei_2050 NC_009617.1 2385489 2388098 D PFAM: protein of unknown function DUF214; KEGG: oih:OB0360 hypothetical conserved protein; hypothetical protein 2385489..2388098 Clostridium beijerinckii NCIMB 8052 5293262 YP_001309175.1 CDS Cbei_2051 NC_009617.1 2388709 2388954 D KEGG: gka:GK1812 hypothetical protein; hypothetical protein 2388709..2388954 Clostridium beijerinckii NCIMB 8052 5293263 YP_001309176.1 CDS Cbei_2052 NC_009617.1 2388954 2389361 D KEGG: gka:GK1811 hypothetical protein; hypothetical protein 2388954..2389361 Clostridium beijerinckii NCIMB 8052 5293264 YP_001309177.1 CDS Cbei_2053 NC_009617.1 2389530 2390468 R PFAM: ApbE family lipoprotein; KEGG: smu:SMU.1088 thiamine biosynthesis lipoprotein; ApbE family lipoprotein complement(2389530..2390468) Clostridium beijerinckii NCIMB 8052 5293265 YP_001309178.1 CDS Cbei_2054 NC_009617.1 2390461 2391408 R PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: lpl:lp_1422 transcription regulator; LysR family transcriptional regulator complement(2390461..2391408) Clostridium beijerinckii NCIMB 8052 5293266 YP_001309179.1 CDS Cbei_2055 NC_009617.1 2391661 2392260 D PFAM: NADPH-dependent FMN reductase; KEGG: lpl:lp_1424 oxidoreductase (); NADPH-dependent FMN reductase 2391661..2392260 Clostridium beijerinckii NCIMB 8052 5293267 YP_001309180.1 CDS Cbei_2056 NC_009617.1 2392275 2394698 D TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; NADPH-dependent FMN reductase; FAD dependent oxidoreductase; FMN-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: smu:SMU.180 oxidoreductase; possible fumarate reductase; flavocytochrome c 2392275..2394698 Clostridium beijerinckii NCIMB 8052 5293268 YP_001309181.1 CDS Cbei_2057 NC_009617.1 2395103 2395471 D PFAM: protein of unknown function DUF1304; KEGG: btl:BALH_2866 hypothetical protein; hypothetical protein 2395103..2395471 Clostridium beijerinckii NCIMB 8052 5293269 YP_001309182.1 CDS Cbei_2058 NC_009617.1 2395545 2396204 D PFAM: DSBA oxidoreductase; KEGG: cac:CAC3447 protein-disulfide isomerase DsbC/DsbG; DSBA oxidoreductase 2395545..2396204 Clostridium beijerinckii NCIMB 8052 5293270 YP_001309183.1 CDS Cbei_2059 NC_009617.1 2396471 2397790 D PFAM: SEC-C motif domain protein; KEGG: dsy:DSY0707 hypothetical protein; SecC motif-containing protein 2396471..2397790 Clostridium beijerinckii NCIMB 8052 5293271 YP_001309184.1 CDS Cbei_2060 NC_009617.1 2397962 2398570 D hypothetical protein 2397962..2398570 Clostridium beijerinckii NCIMB 8052 5293272 YP_001309185.1 CDS Cbei_2061 NC_009617.1 2399301 2400545 D TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: llm:llmg_0910 ammonium transporter AmtB; ammonium transporter 2399301..2400545 Clostridium beijerinckii NCIMB 8052 5293273 YP_001309186.1 CDS Cbei_2062 NC_009617.1 2401047 2401442 D hypothetical protein 2401047..2401442 Clostridium beijerinckii NCIMB 8052 5293274 YP_001309187.1 CDS Cbei_2063 NC_009617.1 2401624 2404248 R PFAM: pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising protein, mobile region; KEGG: cac:CAC0534 phosphoenolpyruvate synthase (gene pps); phosphoenolpyruvate synthase complement(2401624..2404248) Clostridium beijerinckii NCIMB 8052 5293275 YP_001309188.1 CDS Cbei_2064 NC_009617.1 2404307 2404954 R PFAM: regulatory protein, TetR; KEGG: cth:Cthe_3140 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2404307..2404954) Clostridium beijerinckii NCIMB 8052 5293276 YP_001309189.1 CDS Cbei_2065 NC_009617.1 2405203 2405817 D PFAM: regulatory protein, TetR; KEGG: dsy:DSY4218 hypothetical protein; TetR family transcriptional regulator 2405203..2405817 Clostridium beijerinckii NCIMB 8052 5293277 YP_001309190.1 CDS Cbei_2066 NC_009617.1 2405840 2408494 D PFAM: pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising protein, mobile region; KEGG: dsy:DSY4219 phosphoenolpyruvate synthase; phosphoenolpyruvate synthase 2405840..2408494 Clostridium beijerinckii NCIMB 8052 5293278 YP_001309191.1 CDS Cbei_2067 NC_009617.1 2408734 2410107 R PFAM: amidohydrolase; KEGG: hch:HCH_01106 cytosine deaminase and related metal-dependent hydrolase; amidohydrolase complement(2408734..2410107) Clostridium beijerinckii NCIMB 8052 5293279 YP_001309192.1 CDS Cbei_2068 NC_009617.1 2410725 2411114 D KEGG: tde:TDE2752 hypothetical protein; glutaredoxin-like protein 2410725..2411114 Clostridium beijerinckii NCIMB 8052 5293280 YP_001309193.1 CDS Cbei_2069 NC_009617.1 2411617 2412183 R PFAM: manganese containing catalase; KEGG: cpr:CPR_0934 spore coat peptide assembly protein CotJC; manganese containing catalase complement(2411617..2412183) Clostridium beijerinckii NCIMB 8052 5293281 YP_001309194.1 CDS Cbei_2070 NC_009617.1 2412190 2412453 R KEGG: cpr:CPR_0933 spore coat peptide assembly protein CotJB; spore coat peptide assembly protein CotJB complement(2412190..2412453) Clostridium beijerinckii NCIMB 8052 5293282 YP_001309195.1 CDS Cbei_2071 NC_009617.1 2412463 2412777 R KEGG: cpf:CPF_1066 hypothetical protein; hypothetical protein complement(2412463..2412777) Clostridium beijerinckii NCIMB 8052 5293283 YP_001309196.1 CDS Cbei_2072 NC_009617.1 2412959 2413822 R PFAM: extracellular solute-binding protein, family 3; KEGG: bja:blr2224 ABC transporter amino acid-binding protein; extracellular solute-binding protein complement(2412959..2413822) Clostridium beijerinckii NCIMB 8052 5293284 YP_001309197.1 CDS Cbei_2073 NC_009617.1 2414204 2415538 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cac:CAC3319 signal transduction histidine kinase; histidine kinase 2414204..2415538 Clostridium beijerinckii NCIMB 8052 5293285 YP_001309198.1 CDS Cbei_2074 NC_009617.1 2416228 2416764 R PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC1557 predicted acetyltransferase; N-acetyltransferase GCN5 complement(2416228..2416764) Clostridium beijerinckii NCIMB 8052 5293286 YP_001309199.1 CDS Cbei_2075 NC_009617.1 2417507 2418400 D PFAM: NUDIX hydrolase; KEGG: cth:Cthe_3126 NUDIX hydrolase; NUDIX hydrolase 2417507..2418400 Clostridium beijerinckii NCIMB 8052 5293287 YP_001309200.1 CDS Cbei_2076 NC_009617.1 2418470 2419270 D KEGG: shw:Sputw3181_1681 ribose-phosphate pyrophosphokinase; ribose-phosphate pyrophosphokinase 2418470..2419270 Clostridium beijerinckii NCIMB 8052 5293288 YP_001309201.1 CDS Cbei_2077 NC_009617.1 2419768 2420307 D KEGG: lla:L67226 amidase; amidase 2419768..2420307 Clostridium beijerinckii NCIMB 8052 5293289 YP_001309202.1 CDS Cbei_2078 NC_009617.1 2420319 2421788 D PFAM: Nicotinate phosphoribosyltransferase and related; KEGG: son:SO1981 hypothetical protein; nicotinate phosphoribosyltransferase 2420319..2421788 Clostridium beijerinckii NCIMB 8052 5293290 YP_001309203.1 CDS Cbei_2080 NC_009617.1 2422056 2423096 D hypothetical protein 2422056..2423096 Clostridium beijerinckii NCIMB 8052 5296367 YP_001309204.1 CDS Cbei_2081 NC_009617.1 2423239 2424162 D KEGG: rha:RHA1_ro08617 hypothetical protein; hypothetical protein 2423239..2424162 Clostridium beijerinckii NCIMB 8052 5293292 YP_001309205.1 CDS Cbei_2082 NC_009617.1 2424269 2425531 D PFAM: adenylosuccinate synthetase; KEGG: rha:RHA1_ro08616 adenylosuccinate synthetase; adenylosuccinate synthase 2424269..2425531 Clostridium beijerinckii NCIMB 8052 5293293 YP_001309206.1 CDS Cbei_2083 NC_009617.1 2426183 2427658 D PFAM: GntR family transcriptional regulator; aminotransferase, class I and II; KEGG: bca:BCE_2708 transcriptional regulator, GntR family; GntR family transcriptional regulator 2426183..2427658 Clostridium beijerinckii NCIMB 8052 5293294 YP_001309207.1 CDS Cbei_2084 NC_009617.1 2427766 2428383 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: cac:CAC2593 uncharacterized conserved membrane protein, YGGA family; lysine exporter protein LysE/YggA 2427766..2428383 Clostridium beijerinckii NCIMB 8052 5293295 YP_001309208.1 CDS Cbei_2085 NC_009617.1 2429141 2430097 D PFAM: dihydrouridine synthase, DuS; KEGG: cac:CAC3454 predicted TIM-barrel enzyme, NifR3 family; dihydrouridine synthase 2429141..2430097 Clostridium beijerinckii NCIMB 8052 5293296 YP_001309209.1 CDS Cbei_2086 NC_009617.1 2430700 2431896 D enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity; trans-2-enoyl-CoA reductase 2430700..2431896 Clostridium beijerinckii NCIMB 8052 5293297 YP_001309210.1 CDS Cbei_2087 NC_009617.1 2432104 2434038 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cno:NT01CX_0224 sensory transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2432104..2434038 Clostridium beijerinckii NCIMB 8052 5293298 YP_001309211.1 CDS Cbei_2088 NC_009617.1 2434280 2434948 D PFAM: TENA/THI-4 domain protein; KEGG: bce:BC0742 transcriptional activator tenA; TenA family transcription regulator 2434280..2434948 Clostridium beijerinckii NCIMB 8052 5293299 YP_001309212.1 CDS Cbei_2089 NC_009617.1 2434949 2435716 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH2680 ABC transporter (ATP-binding protein); ABC transporter 2434949..2435716 Clostridium beijerinckii NCIMB 8052 5293300 YP_001309213.1 CDS Cbei_2090 NC_009617.1 2435713 2436495 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CAC1399 ABC transporter permease component; binding-protein-dependent transport system inner membrane protein 2435713..2436495 Clostridium beijerinckii NCIMB 8052 5293301 YP_001309214.1 CDS Cbei_2091 NC_009617.1 2436476 2437480 D PFAM: NMT1/THI5 like; KEGG: bce:BC0745 hydroxymethylpyrimidine-binding protein; NMT1/THI5-like protein 2436476..2437480 Clostridium beijerinckii NCIMB 8052 5293302 YP_001309215.1 CDS Cbei_2092 NC_009617.1 2438193 2438636 D PFAM: regulatory protein, MarR; transcriptional regulator TrmB; KEGG: tte:TTE2515 transcriptional regulator; transcriptional regulator TrmB 2438193..2438636 Clostridium beijerinckii NCIMB 8052 5293303 YP_001309216.1 CDS Cbei_2093 NC_009617.1 2438650 2440425 D PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC3282 ABC-type multidrug/protein/lipid transport system, ATPase component; multidrug ABC transporter ATPase 2438650..2440425 Clostridium beijerinckii NCIMB 8052 5293304 YP_001309217.1 CDS Cbei_2094 NC_009617.1 2440422 2442350 D PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: cno:NT01CX_1825 ABC-type multidrug/protein/lipid transport system, ATPase; multidrug ABC transporter 2440422..2442350 Clostridium beijerinckii NCIMB 8052 5293305 YP_001309218.1 CDS Cbei_2095 NC_009617.1 2442825 2443067 D KEGG: pin:Ping_1634 acyl carrier protein; acyl carrier protein 2442825..2443067 Clostridium beijerinckii NCIMB 8052 5293306 YP_001309219.1 CDS Cbei_2096 NC_009617.1 2443064 2444542 D PFAM: AMP-dependent synthetase and ligase; KEGG: mhu:Mhun_3158 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 2443064..2444542 Clostridium beijerinckii NCIMB 8052 5293307 YP_001309220.1 CDS Cbei_2097 NC_009617.1 2444539 2445636 D PFAM: acyl-protein synthetase, LuxE; KEGG: mhu:Mhun_3112 acyl-protein synthetase, LuxE; acyl-protein synthetase LuxE 2444539..2445636 Clostridium beijerinckii NCIMB 8052 5293308 YP_001309221.1 CDS Cbei_2098 NC_009617.1 2445633 2446928 D PFAM: acyl-CoA reductase; KEGG: mhu:Mhun_3113 acyl protein synthase/acyl-CoA reductase RfbN; acyl-CoA reductase 2445633..2446928 Clostridium beijerinckii NCIMB 8052 5293309 YP_001309222.1 CDS Cbei_2099 NC_009617.1 2447041 2448813 D TIGRFAM: PAS sensor protein; PFAM: CBS domain containing protein; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: ATPase AAA; KEGG: swo:Swol_1487 sigma-L-dependent transcriptional regulator; sigma-54 dependent trancsriptional regulator 2447041..2448813 Clostridium beijerinckii NCIMB 8052 5293310 YP_001309223.1 CDS Cbei_2100 NC_009617.1 2449273 2450727 D PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: pgi:PG0692 gamma-aminobutyrate metabolism dehydratase/isomerase; vinylacetyl-CoA Delta-isomerase 2449273..2450727 Clostridium beijerinckii NCIMB 8052 5293311 YP_001309224.1 CDS Cbei_2101 NC_009617.1 2450729 2451010 D PFAM: nitrogen-fixing NifU domain protein; KEGG: ecn:Ecaj_0800 nitrogen-fixing NifU, C-terminal; NifU domain-containing protein 2450729..2451010 Clostridium beijerinckii NCIMB 8052 5293312 YP_001309225.1 CDS Cbei_2102 NC_009617.1 2451026 2451289 D hypothetical protein 2451026..2451289 Clostridium beijerinckii NCIMB 8052 5293313 YP_001309226.1 CDS Cbei_2103 NC_009617.1 2451308 2452618 D PFAM: acetyl-CoA hydrolase/transferase; KEGG: ctc:CTC00482 4-hydroxybutyrate coenzyme A transferase; acetyl-CoA hydrolase/transferase 2451308..2452618 Clostridium beijerinckii NCIMB 8052 5293314 YP_001309227.1 CDS Cbei_2104 NC_009617.1 2452654 2453457 D PFAM: beta-lactamase domain protein; KEGG: ssp:SSP0236 similar to quorum-quenching N-acyl homoserine lactonase; beta-lactamase domain-containing protein 2452654..2453457 Clostridium beijerinckii NCIMB 8052 5293315 YP_001309228.1 CDS Cbei_2105 NC_009617.1 2453926 2454402 D PFAM: GCN5-related N-acetyltransferase; KEGG: pat:Patl_1595 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2453926..2454402 Clostridium beijerinckii NCIMB 8052 5293316 YP_001309229.1 CDS Cbei_2106 NC_009617.1 2454840 2455640 D catalyzes the formation of L-histidinol from L-histidinol phosphate; histidinol-phosphatase 2454840..2455640 Clostridium beijerinckii NCIMB 8052 5293317 YP_001309230.1 CDS Cbei_2107 NC_009617.1 2455683 2456288 D PFAM: protein of unknown function DUF218; KEGG: cpf:CPF_1089 hypothetical protein; hypothetical protein 2455683..2456288 Clostridium beijerinckii NCIMB 8052 5293318 YP_001309231.1 CDS Cbei_2108 NC_009617.1 2456705 2457028 D PFAM: ArsR family transcriptional regulator; KEGG: lin:pli0036 similar to arsenical resistance operon repressor; ArsR family transcriptional regulator 2456705..2457028 Clostridium beijerinckii NCIMB 8052 5293319 YP_001309232.1 CDS Cbei_2109 NC_009617.1 2457103 2457489 D PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: dsy:DSY4151 hypothetical protein; arsenical resistance operon trans-acting repressor ArsD 2457103..2457489 Clostridium beijerinckii NCIMB 8052 5293320 YP_001309233.1 CDS Cbei_2110 NC_009617.1 2457545 2459293 D KEGG: dsy:DSY4598 hypothetical protein; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; SMART: ATPase AAA; arsenite-activated ATPase ArsA 2457545..2459293 Clostridium beijerinckii NCIMB 8052 5293321 YP_001309234.1 CDS Cbei_2111 NC_009617.1 2459319 2459732 D PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: cac:CA_P0105 arsenate reductase, ArsC, protein-tyrosine-phosphatase family enzyme; protein tyrosine phosphatase 2459319..2459732 Clostridium beijerinckii NCIMB 8052 5293322 YP_001309235.1 CDS Cbei_2112 NC_009617.1 2459761 2460810 D TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: cac:CA_P0104 heavy metal resistance membrane protein; arsenical-resistance protein 2459761..2460810 Clostridium beijerinckii NCIMB 8052 5293323 YP_001309236.1 CDS Cbei_2113 NC_009617.1 2461021 2461281 D PFAM: Domain of unknown function DUF1883; KEGG: maq:Maqu_1263 TIR protein; hypothetical protein 2461021..2461281 Clostridium beijerinckii NCIMB 8052 5293324 YP_001309237.1 CDS Cbei_2114 NC_009617.1 2461773 2463281 D catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5-monophosphate dehydrogenase 2461773..2463281 Clostridium beijerinckii NCIMB 8052 5293325 YP_001309238.1 CDS Cbei_2115 NC_009617.1 2463906 2465792 D PFAM: DNA mismatch repair protein MutS domain protein; SMART: MutS III domain protein; KEGG: cac:CA_P0099 DNA mismatch repair protein, MutS fragment; DNA mismatch repair protein MutS domain-containing protein 2463906..2465792 Clostridium beijerinckii NCIMB 8052 5293326 YP_001309239.1 CDS Cbei_2116 NC_009617.1 2466533 2467786 D PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cno:NT01CX_0501 fusion HD-GYP domain and HD-hydrolase domain; metal dependent phosphohydrolase 2466533..2467786 Clostridium beijerinckii NCIMB 8052 5293327 YP_001309240.1 CDS Cbei_2117 NC_009617.1 2468425 2469129 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cpr:CPR_0448 DNA-binding response regulator; two component transcriptional regulator 2468425..2469129 Clostridium beijerinckii NCIMB 8052 5293328 YP_001309241.1 CDS Cbei_2118 NC_009617.1 2469116 2471290 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cpe:CPE0458 two-component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 2469116..2471290 Clostridium beijerinckii NCIMB 8052 5293329 YP_001309242.1 CDS Cbei_2119 NC_009617.1 2471393 2471572 D hypothetical protein 2471393..2471572 Clostridium beijerinckii NCIMB 8052 5293330 YP_001309243.1 CDS Cbei_2120 NC_009617.1 2471753 2472094 D KEGG: cpr:CPR_1393 hypothetical protein; hypothetical protein 2471753..2472094 Clostridium beijerinckii NCIMB 8052 5293331 YP_001309244.1 CDS Cbei_2121 NC_009617.1 2472213 2473268 D PFAM: alpha/beta hydrolase fold; KEGG: cac:CAC2246 lysophospholipase L2 PLDB, hydrolase of alpha/beta superfamily; alpha/beta fold family hydrolase 2472213..2473268 Clostridium beijerinckii NCIMB 8052 5293332 YP_001309245.1 CDS Cbei_2122 NC_009617.1 2473332 2474741 R TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor, type I/II extracellular region; major facilitator superfamily MFS_1; KEGG: cac:CAC0751 proton-dependent oligopeptide transporter; amino acid/peptide transporter complement(2473332..2474741) Clostridium beijerinckii NCIMB 8052 5293333 YP_001309246.1 CDS Cbei_2123 NC_009617.1 2475110 2476015 D KEGG: lip:LI0105 hypothetical protein; hypothetical protein 2475110..2476015 Clostridium beijerinckii NCIMB 8052 5293334 YP_001309247.1 CDS Cbei_2124 NC_009617.1 2476049 2477161 D KEGG: cth:Cthe_2170 hypothetical protein; hypothetical protein 2476049..2477161 Clostridium beijerinckii NCIMB 8052 5293335 YP_001309248.1 CDS Cbei_2125 NC_009617.1 2477320 2477874 D PFAM: GCN5-related N-acetyltransferase; KEGG: bat:BAS0323 hypothetical protein; N-acetyltransferase GCN5 2477320..2477874 Clostridium beijerinckii NCIMB 8052 5293336 YP_001309249.1 CDS aspC NC_009617.1 2478461 2479750 D catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 2478461..2479750 Clostridium beijerinckii NCIMB 8052 5293337 YP_001309250.1 CDS Cbei_2127 NC_009617.1 2479958 2480242 D TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase, C subunit; KEGG: cac:CAC2978 Glu-tRNA amidotransferase, subunit C; glutamyl-tRNA(Gln) amidotransferase subunit C 2479958..2480242 Clostridium beijerinckii NCIMB 8052 5293338 YP_001309251.1 CDS gatA NC_009617.1 2480258 2481697 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 2480258..2481697 Clostridium beijerinckii NCIMB 8052 5293339 YP_001309252.1 CDS gatB NC_009617.1 2481711 2483150 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 2481711..2483150 Clostridium beijerinckii NCIMB 8052 5293340 YP_001309253.1 CDS Cbei_2130 NC_009617.1 2483344 2485215 D KEGG: pfa:PF07_0038 Cg7 protein; hypothetical protein 2483344..2485215 Clostridium beijerinckii NCIMB 8052 5293341 YP_001309254.1 CDS Cbei_2131 NC_009617.1 2485619 2486284 D PFAM: cell wall binding repeat-containing protein; KEGG: cpf:CPF_0605 cell wall binding repeat protein/mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain; cell wall binding repeat-containing protein 2485619..2486284 Clostridium beijerinckii NCIMB 8052 5293342 YP_001309255.1 CDS Cbei_2132 NC_009617.1 2487770 2488405 D PFAM: Ankyrin; KEGG: spu:577492 similar to ankyrin 2,3/unc44; ankyrin 2487770..2488405 Clostridium beijerinckii NCIMB 8052 5293343 YP_001309256.1 CDS Cbei_2133 NC_009617.1 2488552 2488707 D hypothetical protein 2488552..2488707 Clostridium beijerinckii NCIMB 8052 5293344 YP_001309257.1 CDS Cbei_2134 NC_009617.1 2488814 2490343 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bce:BC0376 alkyl hydroperoxide reductase subunit F; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2488814..2490343) Clostridium beijerinckii NCIMB 8052 5293345 YP_001309258.1 CDS Cbei_2135 NC_009617.1 2490355 2490918 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cth:Cthe_1965 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; peroxiredoxin complement(2490355..2490918) Clostridium beijerinckii NCIMB 8052 5293346 YP_001309259.1 CDS Cbei_2136 NC_009617.1 2491078 2492079 R PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: ana:all2613 transcriptional regulator; helix-turn-helix domain-containing protein complement(2491078..2492079) Clostridium beijerinckii NCIMB 8052 5293347 YP_001309260.1 CDS Cbei_2137 NC_009617.1 2492294 2493913 D PFAM: cell wall binding repeat-containing protein; KEGG: cpe:CPE0570 hypothetical protein; cell wall binding repeat-containing protein 2492294..2493913 Clostridium beijerinckii NCIMB 8052 5293348 YP_001309261.1 CDS Cbei_2138 NC_009617.1 2494282 2495232 D PFAM: periplasmic binding protein; KEGG: cpe:CPE0810 probable iron(III) dicitrate ABC transporter; periplasmic binding protein 2494282..2495232 Clostridium beijerinckii NCIMB 8052 5293349 YP_001309262.1 CDS Cbei_2139 NC_009617.1 2495219 2496211 D PFAM: transport system permease; KEGG: cpr:CPR_0795 iron compound ABC transporter permease; transport system permease 2495219..2496211 Clostridium beijerinckii NCIMB 8052 5293350 YP_001309263.1 CDS Cbei_2140 NC_009617.1 2496213 2497220 D PFAM: transport system permease; KEGG: cpe:CPE0812 probable ferrichrome ABC transporter; transport system permease 2496213..2497220 Clostridium beijerinckii NCIMB 8052 5293351 YP_001309264.1 CDS Cbei_2141 NC_009617.1 2497221 2498009 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_0810 ferrichrome ABC transporter ATP-binding protein; ABC transporter 2497221..2498009 Clostridium beijerinckii NCIMB 8052 5293352 YP_001309265.1 CDS Cbei_2142 NC_009617.1 2498011 2499231 D PFAM: major facilitator superfamily MFS_1; KEGG: btk:BT9727_2273 permease; possible macrolide-efflux protein; major facilitator superfamily transporter 2498011..2499231 Clostridium beijerinckii NCIMB 8052 5293353 YP_001309266.1 CDS Cbei_2143 NC_009617.1 2499555 2500421 R PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: cac:CAC2394 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2499555..2500421) Clostridium beijerinckii NCIMB 8052 5293354 YP_001309267.1 CDS Cbei_2144 NC_009617.1 2500562 2502295 D PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC2393 uncharacterized ABC transporter ATPase component; ABC transporter 2500562..2502295 Clostridium beijerinckii NCIMB 8052 5293355 YP_001309268.1 CDS Cbei_2145 NC_009617.1 2502296 2504035 D PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC2392 uncharacterized ABC transporter ATPase component; ABC transporter 2502296..2504035 Clostridium beijerinckii NCIMB 8052 5293356 YP_001309269.1 CDS Cbei_2146 NC_009617.1 2504179 2505099 D PFAM: polysaccharide deacetylase; KEGG: cpf:CPF_0823 polysaccharide deacetylase family protein; polysaccharide deacetylase 2504179..2505099 Clostridium beijerinckii NCIMB 8052 5293357 YP_001309270.1 CDS Cbei_2147 NC_009617.1 2505529 2507598 D TIGRFAM: PAS sensor protein; PFAM: phosphocarrier HPr protein; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; ATPase AAA; KEGG: cpr:CPR_2353 phosphocarrier HPr/sensory box protein/sigma-54 dependent transcriptional regulator; sigma-54 dependent trancsriptional regulator 2505529..2507598 Clostridium beijerinckii NCIMB 8052 5293358 YP_001309271.1 CDS Cbei_2148 NC_009617.1 2508091 2509089 D with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK 2508091..2509089 Clostridium beijerinckii NCIMB 8052 5293359 YP_001309272.1 CDS Cbei_2149 NC_009617.1 2509242 2509871 D TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: cno:NT01CX_0688 dihydroxyacetone kinase, L subunit; dihydroxyacetone kinase subunit L 2509242..2509871 Clostridium beijerinckii NCIMB 8052 5293360 YP_001309273.1 CDS Cbei_2150 NC_009617.1 2509921 2510310 D TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; PFAM: PTS system fructose subfamily IIA component; KEGG: cno:NT01CX_0687 dihydroxyacetone kinase, phosphotransfer subunit; PTS system mannnose-specific transporter subunit IIA 2509921..2510310 Clostridium beijerinckii NCIMB 8052 5293361 YP_001309274.1 CDS Cbei_2151 NC_009617.1 2510838 2511542 D KEGG: oih:OB0245 hypothetical protein; hypothetical protein 2510838..2511542 Clostridium beijerinckii NCIMB 8052 5293362 YP_001309275.1 CDS Cbei_2152 NC_009617.1 2512744 2513823 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pca:Pcar_1087 NADH:flavin oxidoreductase, Old Yellow enzyme family; NADH:flavin oxidoreductase 2512744..2513823 Clostridium beijerinckii NCIMB 8052 5293363 YP_001309276.1 CDS Cbei_2153 NC_009617.1 2513982 2514434 D PFAM: regulatory protein, MarR; KEGG: sfu:Sfum_1142 transcriptional regulator, MarR family; MarR family transcriptional regulator 2513982..2514434 Clostridium beijerinckii NCIMB 8052 5293364 YP_001309277.1 CDS Cbei_2154 NC_009617.1 2515006 2516436 D TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC3668 MDR-type permease; EmrB/QacA family drug resistance transporter 2515006..2516436 Clostridium beijerinckii NCIMB 8052 5293365 YP_001309278.1 CDS Cbei_2155 NC_009617.1 2516949 2517521 R hypothetical protein complement(2516949..2517521) Clostridium beijerinckii NCIMB 8052 5293366 YP_001309279.1 CDS Cbei_2156 NC_009617.1 2518072 2519094 D PFAM: 5'-3' exonuclease; SMART: Helix-hairpin-helix domain protein, class 2; KEGG: bcl:ABC2709 DNA-directed DNA polymerase I; 5'-3' exonuclease 2518072..2519094 Clostridium beijerinckii NCIMB 8052 5293367 YP_001309280.1 CDS Cbei_2157 NC_009617.1 2519247 2519609 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sat:SYN_00718 lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase 2519247..2519609 Clostridium beijerinckii NCIMB 8052 5293368 YP_001309281.1 CDS Cbei_2158 NC_009617.1 2519728 2520063 R PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: cth:Cthe_0063 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein complement(2519728..2520063) Clostridium beijerinckii NCIMB 8052 5293369 YP_001309282.1 CDS Cbei_2159 NC_009617.1 2520288 2521376 D KEGG: pfa:PF11_0317 structural maintenance of chromosome protein; hypothetical protein 2520288..2521376 Clostridium beijerinckii NCIMB 8052 5293370 YP_001309283.1 CDS Cbei_2160 NC_009617.1 2521742 2524993 D PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; KEGG: swo:Swol_0601 signal transduction histidine kinase-like protein; multi-sensor hybrid histidine kinase 2521742..2524993 Clostridium beijerinckii NCIMB 8052 5293371 YP_001309284.1 CDS Cbei_2161 NC_009617.1 2525510 2526211 D hypothetical protein 2525510..2526211 Clostridium beijerinckii NCIMB 8052 5293372 YP_001309285.1 CDS Cbei_2162 NC_009617.1 2526313 2526651 R PFAM: helix-turn-helix domain protein; KEGG: chy:CHY_1862 DNA-binding protein; XRE family transcriptional regulator complement(2526313..2526651) Clostridium beijerinckii NCIMB 8052 5293373 YP_001309286.1 CDS Cbei_2163 NC_009617.1 2527658 2527864 D hypothetical protein 2527658..2527864 Clostridium beijerinckii NCIMB 8052 5293374 YP_001309287.1 CDS Cbei_2164 NC_009617.1 2527911 2528135 D hypothetical protein 2527911..2528135 Clostridium beijerinckii NCIMB 8052 5293375 YP_001309288.1 CDS Cbei_2165 NC_009617.1 2528773 2529174 D TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: gsu:GSU2929 hypothetical protein; hemerythrin-like metal-binding protein 2528773..2529174 Clostridium beijerinckii NCIMB 8052 5293376 YP_001309289.1 CDS Cbei_2166 NC_009617.1 2529288 2529680 D hypothetical protein 2529288..2529680 Clostridium beijerinckii NCIMB 8052 5293377 YP_001309290.1 CDS Cbei_2167 NC_009617.1 2530277 2530690 D hypothetical protein 2530277..2530690 Clostridium beijerinckii NCIMB 8052 5293378 YP_001309291.1 CDS Cbei_2168 NC_009617.1 2531231 2531437 D hypothetical protein 2531231..2531437 Clostridium beijerinckii NCIMB 8052 5293379 YP_001309292.1 CDS Cbei_2169 NC_009617.1 2531509 2531703 D hypothetical protein 2531509..2531703 Clostridium beijerinckii NCIMB 8052 5293380 YP_001309293.1 CDS Cbei_2170 NC_009617.1 2531745 2531933 D hypothetical protein 2531745..2531933 Clostridium beijerinckii NCIMB 8052 5293381 YP_001309294.1 CDS Cbei_2171 NC_009617.1 2532694 2535792 D PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; histidine kinase internal region; KEGG: dsy:DSY0460 hypothetical protein; signal transduction histidine kinase LytS 2532694..2535792 Clostridium beijerinckii NCIMB 8052 5293382 YP_001309295.1 CDS Cbei_2172 NC_009617.1 2535810 2536934 D PFAM: response regulator receiver; KEGG: dsy:DSY0459 hypothetical protein; response regulator receiver/SARP domain-containing protein 2535810..2536934 Clostridium beijerinckii NCIMB 8052 5293383 YP_001309296.1 CDS Cbei_2173 NC_009617.1 2537216 2537464 D PFAM: Septum formation topological specificity factor MinE; KEGG: cpr:CPR_2104 cell division topological specificity factor MinE; septum formation topological specificity factor MinE 2537216..2537464 Clostridium beijerinckii NCIMB 8052 5293384 YP_001309297.1 CDS Cbei_2174 NC_009617.1 2537757 2538122 D PFAM: arsenate reductase and related; KEGG: ctc:CTC01181 arsenate reductase; arsenate reductase-like protein 2537757..2538122 Clostridium beijerinckii NCIMB 8052 5293385 YP_001309298.1 CDS Cbei_2175 NC_009617.1 2538482 2540485 D PFAM: helix-turn-helix- domain containing protein, AraC type; pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: dsy:DSY4310 hypothetical protein; 2-isopropylmalate synthase 2538482..2540485 Clostridium beijerinckii NCIMB 8052 5293386 YP_001309299.1 CDS Cbei_2176 NC_009617.1 2541063 2541398 D PFAM: protein of unknown function UPF0060; KEGG: cpr:CPR_1507 uncharacterized BCR, YnfA/UPF0060 family superfamily; hypothetical protein 2541063..2541398 Clostridium beijerinckii NCIMB 8052 5293387 YP_001309300.1 CDS Cbei_2177 NC_009617.1 2541584 2541802 D hypothetical protein 2541584..2541802 Clostridium beijerinckii NCIMB 8052 5293388 YP_001309301.1 CDS Cbei_2178 NC_009617.1 2541835 2542068 D hypothetical protein 2541835..2542068 Clostridium beijerinckii NCIMB 8052 5293389 YP_001309302.1 CDS Cbei_2179 NC_009617.1 2542135 2542554 D hypothetical protein 2542135..2542554 Clostridium beijerinckii NCIMB 8052 5293390 YP_001309303.1 CDS Cbei_2180 NC_009617.1 2543783 2545747 D PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; SMART: ATPase AAA; KEGG: cno:NT01CX_0469 signal-transduction and transcriptional-control protein; Fis family GAF modulated sigma54 specific transcriptional regulator 2543783..2545747 Clostridium beijerinckii NCIMB 8052 5293391 YP_001309304.1 CDS Cbei_2181 NC_009617.1 2546128 2547294 D PFAM: iron-containing alcohol dehydrogenase; KEGG: cpf:CPF_1465 NADPH-dependent butanol dehydrogenase; iron-containing alcohol dehydrogenase 2546128..2547294 Clostridium beijerinckii NCIMB 8052 5293392 YP_001309305.1 CDS Cbei_2182 NC_009617.1 2547673 2548563 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: cpf:CPF_1464 oxidoreductase, NAD-binding; ferredoxin-NADP(+) reductase subunit alpha 2547673..2548563 Clostridium beijerinckii NCIMB 8052 5293393 YP_001309306.1 CDS Cbei_2183 NC_009617.1 2548569 2549951 D function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase 2548569..2549951 Clostridium beijerinckii NCIMB 8052 5293394 YP_001309307.1 CDS Cbei_2184 NC_009617.1 2550515 2551726 D PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; KEGG: dsy:DSY2436 hypothetical protein; diguanylate phosphodiesterase 2550515..2551726 Clostridium beijerinckii NCIMB 8052 5293395 YP_001309308.1 CDS Cbei_2185 NC_009617.1 2552582 2552824 D hypothetical protein 2552582..2552824 Clostridium beijerinckii NCIMB 8052 5293396 YP_001309309.1 CDS Cbei_2186 NC_009617.1 2553257 2554969 D PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01211 methyl-accepting chemotaxis protein TlpA; methyl-accepting chemotaxis sensory transducer 2553257..2554969 Clostridium beijerinckii NCIMB 8052 5293397 YP_001309310.1 CDS Cbei_2187 NC_009617.1 2556020 2556424 D hypothetical protein 2556020..2556424 Clostridium beijerinckii NCIMB 8052 5293398 YP_001309311.1 CDS Cbei_2188 NC_009617.1 2556651 2557463 R KEGG: aci:ACIAD2621 tolerance to group A colicins, single-stranded filamentous DNA phage, required for OM integrity; hypothetical protein complement(2556651..2557463) Clostridium beijerinckii NCIMB 8052 5293399 YP_001309312.1 CDS Cbei_2189 NC_009617.1 2557745 2558305 D PFAM: nitroreductase; KEGG: bth:BT_1148 NADH dehydrogenase/NAD(P)H nitroreductase; nitroreductase 2557745..2558305 Clostridium beijerinckii NCIMB 8052 5293400 YP_001309313.1 CDS Cbei_2190 NC_009617.1 2558665 2559954 D PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: cac:CAC1422 uncharacterized hypothetical protein, YUGS B.subtilis ortholog; hypothetical protein 2558665..2559954 Clostridium beijerinckii NCIMB 8052 5293401 YP_001309314.1 CDS Cbei_2191 NC_009617.1 2560416 2561264 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bha:BH2675 transcriptional regulator (RpiR family); RpiR family transcriptional regulator complement(2560416..2561264) Clostridium beijerinckii NCIMB 8052 5293402 YP_001309315.1 CDS Cbei_2192 NC_009617.1 2561786 2562688 D similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 2561786..2562688 Clostridium beijerinckii NCIMB 8052 5293403 YP_001309316.1 CDS Cbei_2193 NC_009617.1 2562691 2563692 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: efa:EF3141 D-isomer specific 2-hydroxyacid dehydrogenase family protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 2562691..2563692 Clostridium beijerinckii NCIMB 8052 5293404 YP_001309317.1 CDS Cbei_2194 NC_009617.1 2563704 2564807 D PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: efa:EF3140 alcohol dehydrogenase, iron-containing; iron-containing alcohol dehydrogenase 2563704..2564807 Clostridium beijerinckii NCIMB 8052 5293405 YP_001309318.1 CDS Cbei_2195 NC_009617.1 2564818 2565648 D PFAM: phosphotransferase system PTS, sorbose-specific IIC subunit; KEGG: efa:EF3139 PTS system, IIC component; PTS system sorbose-specific transporter subunit IIC 2564818..2565648 Clostridium beijerinckii NCIMB 8052 5293406 YP_001309319.1 CDS Cbei_2196 NC_009617.1 2565661 2566518 D PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: efa:EF3138 PTS system, IID component; PTS system mannose/fructose/sorbose family transporter subunit IID 2565661..2566518 Clostridium beijerinckii NCIMB 8052 5293407 YP_001309320.1 CDS Cbei_2197 NC_009617.1 2566540 2567043 D PFAM: PTS system sorbose subfamily IIB component; KEGG: efa:EF3137 PTS system, IIB component; PTS system sorbose subfamily transporter subunit IIB 2566540..2567043 Clostridium beijerinckii NCIMB 8052 5293408 YP_001309321.1 CDS Cbei_2198 NC_009617.1 2567099 2567971 D hypothetical protein 2567099..2567971 Clostridium beijerinckii NCIMB 8052 5293409 YP_001309322.1 CDS Cbei_2199 NC_009617.1 2568048 2568500 D PFAM: PTS system fructose subfamily IIA component; KEGG: efa:EF3136 PTS system, IIA component; PTS system fructose subfamily transporter subunit IIA 2568048..2568500 Clostridium beijerinckii NCIMB 8052 5293410 YP_001309323.1 CDS Cbei_2200 NC_009617.1 2568513 2569598 D catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase 2568513..2569598 Clostridium beijerinckii NCIMB 8052 5293411 YP_001309324.1 CDS Cbei_2201 NC_009617.1 2569598 2570227 D TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: efa:EF3134 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 2569598..2570227 Clostridium beijerinckii NCIMB 8052 5293412 YP_001309325.1 CDS Cbei_2202 NC_009617.1 2570510 2571433 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC3520 ABC-type transport system, ATPase component; ABC transporter ATPase 2570510..2571433 Clostridium beijerinckii NCIMB 8052 5293413 YP_001309326.1 CDS Cbei_2203 NC_009617.1 2571430 2572128 D KEGG: cac:CAC3519 predicted membrane protein, possible permease; hypothetical protein 2571430..2572128 Clostridium beijerinckii NCIMB 8052 5293414 YP_001309327.1 CDS Cbei_2204 NC_009617.1 2572140 2572730 D PFAM: regulatory protein, TetR; KEGG: cac:CAC3518 transcriptional regulators, AcrR family; TetR family transcriptional regulator 2572140..2572730 Clostridium beijerinckii NCIMB 8052 5293415 YP_001309328.1 CDS Cbei_2205 NC_009617.1 2573005 2574429 R PFAM: GntR family transcriptional regulator; aminotransferase, class I and II; KEGG: dvl:Dvul_0077 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(2573005..2574429) Clostridium beijerinckii NCIMB 8052 5293416 YP_001309329.1 CDS Cbei_2206 NC_009617.1 2574604 2574975 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: cac:CAC3526 FMN-binding protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 2574604..2574975 Clostridium beijerinckii NCIMB 8052 5293417 YP_001309330.1 CDS Cbei_2207 NC_009617.1 2575365 2576483 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: ctc:CTC01638 pleiotropic regulatory protein; DegT/DnrJ/EryC1/StrS aminotransferase 2575365..2576483 Clostridium beijerinckii NCIMB 8052 5293418 YP_001309331.1 CDS Cbei_2208 NC_009617.1 2576633 2577085 D PFAM: GCN5-related N-acetyltransferase; KEGG: bat:BAS2069 acetyltransferase, GNAT family; N-acetyltransferase GCN5 2576633..2577085 Clostridium beijerinckii NCIMB 8052 5293419 YP_001309332.1 CDS Cbei_2209 NC_009617.1 2578092 2578520 D hypothetical protein 2578092..2578520 Clostridium beijerinckii NCIMB 8052 5293420 YP_001309333.1 CDS Cbei_2210 NC_009617.1 2578929 2579369 R PFAM: helix-turn-helix, HxlR type; KEGG: llm:llmg_1903 transcriptional regulator; HxlR family transcriptional regulator complement(2578929..2579369) Clostridium beijerinckii NCIMB 8052 5293421 YP_001309334.1 CDS Cbei_2211 NC_009617.1 2579450 2580106 D PFAM: NADPH-dependent FMN reductase; KEGG: mac:MA1860 iron-sulfur flavoprotein; NADPH-dependent FMN reductase 2579450..2580106 Clostridium beijerinckii NCIMB 8052 5293422 YP_001309335.1 CDS Cbei_2212 NC_009617.1 2580448 2581272 R PFAM: Integral membrane protein TerC; KEGG: lpn:lpg2189 drug efflux protein; integral membrane protein TerC complement(2580448..2581272) Clostridium beijerinckii NCIMB 8052 5293423 YP_001309336.1 CDS Cbei_2213 NC_009617.1 2581760 2582614 D PFAM: peptidase M48, Ste24p; KEGG: dsy:DSY4533 hypothetical protein; peptidase M48, Ste24p 2581760..2582614 Clostridium beijerinckii NCIMB 8052 5293424 YP_001309337.1 CDS Cbei_2215 NC_009617.1 2583185 2583544 R PFAM: helix-turn-helix domain protein; KEGG: cpf:CPF_0928 transcriptional regulator, Cro/CI family; helix-turn-helix domain-containing protein complement(2583185..2583544) Clostridium beijerinckii NCIMB 8052 5296368 YP_001309338.1 CDS Cbei_2216 NC_009617.1 2583863 2584060 D hypothetical protein 2583863..2584060 Clostridium beijerinckii NCIMB 8052 5293426 YP_001309339.1 CDS Cbei_2217 NC_009617.1 2584548 2585819 D TIGRFAM: phage replisome organizer, KEGG: lmo:lmo2317 similar to protein gp49; phage replisome organizer 2584548..2585819 Clostridium beijerinckii NCIMB 8052 5293427 YP_001309340.1 CDS Cbei_2218 NC_009617.1 2585869 2586495 D KEGG: bha:BH3541 hypothetical protein; hypothetical protein 2585869..2586495 Clostridium beijerinckii NCIMB 8052 5293428 YP_001309341.1 CDS Cbei_2219 NC_009617.1 2586729 2586971 D TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: cac:CAC1941 transcription regulator AbrB; AbrB family transcriptional regulator 2586729..2586971 Clostridium beijerinckii NCIMB 8052 5293429 YP_001309342.1 CDS Cbei_2221 NC_009617.1 2587308 2587721 D TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; Helix-turn-helix, type 11 domain protein; KEGG: bha:BH0656 hypothetical protein; BadM/Rrf2 family transcriptional regulator 2587308..2587721 Clostridium beijerinckii NCIMB 8052 5296369 YP_001309343.1 CDS Cbei_2222 NC_009617.1 2587806 2589194 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cpr:CPR_2544 MATE efflux family protein; MATE efflux family protein 2587806..2589194 Clostridium beijerinckii NCIMB 8052 5293431 YP_001309344.1 CDS Cbei_2223 NC_009617.1 2589306 2589524 R KEGG: chy:CHY_0145 hypothetical protein; hypothetical protein complement(2589306..2589524) Clostridium beijerinckii NCIMB 8052 5293432 YP_001309345.1 CDS Cbei_2224 NC_009617.1 2589786 2590010 R hypothetical protein complement(2589786..2590010) Clostridium beijerinckii NCIMB 8052 5293433 YP_001309346.1 CDS Cbei_2225 NC_009617.1 2590312 2590518 D PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: cpr:CPR_1411 small, acid-soluble spore protein; small acid-soluble spore protein, alpha/beta type 2590312..2590518 Clostridium beijerinckii NCIMB 8052 5293434 YP_001309347.1 CDS Cbei_2226 NC_009617.1 2590658 2591374 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: ctc:CTC00979 membrane spanning protein; hypothetical protein complement(2590658..2591374) Clostridium beijerinckii NCIMB 8052 5293435 YP_001309348.1 CDS Cbei_2227 NC_009617.1 2591653 2592540 D PFAM: transcriptional regulator TrmB; KEGG: bsu:BG12303 similar to cyclodextrin metabolism protein; transcriptional regulator TrmB 2591653..2592540 Clostridium beijerinckii NCIMB 8052 5293436 YP_001309349.1 CDS Cbei_2228 NC_009617.1 2592598 2593911 R KEGG: bcl:ABC3181 hypothetical protein; transcriptional regulator complement(2592598..2593911) Clostridium beijerinckii NCIMB 8052 5293437 YP_001309350.1 CDS Cbei_2229 NC_009617.1 2594138 2595361 D TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: cpf:CPF_1002 amidohydrolase family protein; amidohydrolase 2594138..2595361 Clostridium beijerinckii NCIMB 8052 5293438 YP_001309351.1 CDS Cbei_2230 NC_009617.1 2595393 2596223 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpc:RPC_0631 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 2595393..2596223 Clostridium beijerinckii NCIMB 8052 5293439 YP_001309352.1 CDS Cbei_2231 NC_009617.1 2596366 2597202 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mes:Meso_0481 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 2596366..2597202 Clostridium beijerinckii NCIMB 8052 5293440 YP_001309353.1 CDS Cbei_2232 NC_009617.1 2597343 2598551 D PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; KEGG: bfs:BF1216 L-serine dehydratase; serine dehydratase subunit alpha 2597343..2598551 Clostridium beijerinckii NCIMB 8052 5293441 YP_001309354.1 CDS Cbei_2233 NC_009617.1 2599132 2600832 D PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01881 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2599132..2600832 Clostridium beijerinckii NCIMB 8052 5293442 YP_001309355.1 CDS Cbei_2234 NC_009617.1 2600970 2601539 D PFAM: bifunctional deaminase-reductase domain protein; KEGG: bsu:BG10035 similar to unknown proteins from B. subtilis; deaminase-reductase domain-containing protein 2600970..2601539 Clostridium beijerinckii NCIMB 8052 5293443 YP_001309356.1 CDS Cbei_2235 NC_009617.1 2601536 2601721 R hypothetical protein complement(2601536..2601721) Clostridium beijerinckii NCIMB 8052 5293444 YP_001309357.1 CDS Cbei_2236 NC_009617.1 2602200 2602442 D hypothetical protein 2602200..2602442 Clostridium beijerinckii NCIMB 8052 5293445 YP_001309358.1 CDS Cbei_2237 NC_009617.1 2602512 2603084 R TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: ctc:pE88_11 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 factor complement(2602512..2603084) Clostridium beijerinckii NCIMB 8052 5293446 YP_001309359.1 CDS Cbei_2238 NC_009617.1 2604033 2605478 D TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC3346 MDR-type permease; EmrB/QacA family drug resistance transporter 2604033..2605478 Clostridium beijerinckii NCIMB 8052 5293447 YP_001309360.1 CDS Cbei_2239 NC_009617.1 2605797 2606192 R PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: cac:CAC2569 NimC/NimA family protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(2605797..2606192) Clostridium beijerinckii NCIMB 8052 5293448 YP_001309361.1 CDS Cbei_2241 NC_009617.1 2606860 2607300 D PFAM: protein of unknown function DUF861, cupin_3; Cupin 2, conserved barrel domain protein; KEGG: mxa:MXAN_0409 cupin domain protein; cupin 2606860..2607300 Clostridium beijerinckii NCIMB 8052 5296370 YP_001309362.1 CDS Cbei_2242 NC_009617.1 2607365 2607694 R PFAM: helix-turn-helix, HxlR type; KEGG: spm:spyM18_2160 hypothetical protein; HxlR family transcriptional regulator complement(2607365..2607694) Clostridium beijerinckii NCIMB 8052 5293450 YP_001309363.1 CDS Cbei_2243 NC_009617.1 2608186 2609223 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sma:SAV676 dehydrogenase; alcohol dehydrogenase complement(2608186..2609223) Clostridium beijerinckii NCIMB 8052 5293451 YP_001309364.1 CDS Cbei_2244 NC_009617.1 2609368 2609724 D PFAM: helix-turn-helix, HxlR type; KEGG: cac:CAC0195 predicted transcriptional regulator; HxlR family transcriptional regulator 2609368..2609724 Clostridium beijerinckii NCIMB 8052 5293452 YP_001309365.1 CDS Cbei_2246 NC_009617.1 2610273 2610608 D PFAM: Cupin 2, conserved barrel domain protein; KEGG: cps:CPS_2465 hypothetical protein; cupin 2610273..2610608 Clostridium beijerinckii NCIMB 8052 5296371 YP_001309366.1 CDS Cbei_2247 NC_009617.1 2610803 2610955 R hypothetical protein complement(2610803..2610955) Clostridium beijerinckii NCIMB 8052 5293454 YP_001309367.1 CDS Cbei_2248 NC_009617.1 2611358 2611915 D KEGG: bce:BC4829 ribosomal RNA adenine dimethylase; ribosomal RNA adenine dimethylase 2611358..2611915 Clostridium beijerinckii NCIMB 8052 5293455 YP_001309368.1 CDS Cbei_2249 NC_009617.1 2612293 2612976 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ctc:CTC00805 two-component response regulator; two component transcriptional regulator 2612293..2612976 Clostridium beijerinckii NCIMB 8052 5293456 YP_001309369.1 CDS Cbei_2250 NC_009617.1 2613072 2614052 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: ctc:CTC00806 sensory transduction protein kinase; histidine kinase 2613072..2614052 Clostridium beijerinckii NCIMB 8052 5293457 YP_001309370.1 CDS Cbei_2251 NC_009617.1 2614343 2614972 D PFAM: SNARE associated Golgi protein; KEGG: ctc:CTC01769 membrane spanning protein; hypothetical protein 2614343..2614972 Clostridium beijerinckii NCIMB 8052 5293458 YP_001309371.1 CDS Cbei_2252 NC_009617.1 2615136 2615822 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ctc:CTC00805 two-component response regulator; two component transcriptional regulator 2615136..2615822 Clostridium beijerinckii NCIMB 8052 5293459 YP_001309372.1 CDS Cbei_2253 NC_009617.1 2616749 2616937 R hypothetical protein complement(2616749..2616937) Clostridium beijerinckii NCIMB 8052 5293460 YP_001309373.1 CDS Cbei_2254 NC_009617.1 2617035 2617565 R hypothetical protein complement(2617035..2617565) Clostridium beijerinckii NCIMB 8052 5293461 YP_001309374.1 CDS Cbei_2255 NC_009617.1 2617923 2618165 D hypothetical protein 2617923..2618165 Clostridium beijerinckii NCIMB 8052 5293462 YP_001309375.1 CDS Cbei_2256 NC_009617.1 2618223 2618381 D hypothetical protein 2618223..2618381 Clostridium beijerinckii NCIMB 8052 5293463 YP_001309376.1 CDS Cbei_2257 NC_009617.1 2618457 2618846 D KEGG: cpr:CPR_1211 hypothetical protein; hypothetical protein 2618457..2618846 Clostridium beijerinckii NCIMB 8052 5293464 YP_001309377.1 CDS Cbei_2258 NC_009617.1 2618979 2620238 D PFAM: glycosyl transferase, family 28; KEGG: sth:STH2411 UDP-glucose:sterol glucosyltransferase; sterol 3-beta-glucosyltransferase 2618979..2620238 Clostridium beijerinckii NCIMB 8052 5293465 YP_001309378.1 CDS Cbei_2259 NC_009617.1 2620833 2622509 D PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: tte:TTE1253 predicted hydrolase of the metallo-beta-lactamase superfamily; beta-lactamase domain-containing protein 2620833..2622509 Clostridium beijerinckii NCIMB 8052 5293466 YP_001309379.1 CDS Cbei_2260 NC_009617.1 2622851 2623096 R hypothetical protein complement(2622851..2623096) Clostridium beijerinckii NCIMB 8052 5293467 YP_001309380.1 CDS Cbei_2261 NC_009617.1 2623472 2624074 R PFAM: Lytic transglycosylase, catalytic; lytic transglycosylase complement(2623472..2624074) Clostridium beijerinckii NCIMB 8052 5293468 YP_001309381.1 CDS Cbei_2264 NC_009617.1 2626357 2627190 D KEGG: ctc:pE88_44 hypothetical protein; hypothetical protein 2626357..2627190 Clostridium beijerinckii NCIMB 8052 5296373 YP_001309382.1 CDS Cbei_2265 NC_009617.1 2629164 2629523 R PFAM: helix-turn-helix domain protein; KEGG: cpf:CPF_0928 transcriptional regulator, Cro/CI family; helix-turn-helix domain-containing protein complement(2629164..2629523) Clostridium beijerinckii NCIMB 8052 5293470 YP_001309383.1 CDS Cbei_2266 NC_009617.1 2629982 2630179 D hypothetical protein 2629982..2630179 Clostridium beijerinckii NCIMB 8052 5293471 YP_001309384.1 CDS Cbei_2267 NC_009617.1 2630298 2630558 D hypothetical protein 2630298..2630558 Clostridium beijerinckii NCIMB 8052 5293472 YP_001309385.1 CDS Cbei_2268 NC_009617.1 2630786 2632135 D TIGRFAM: phage replisome organizer, KEGG: lmo:lmo2317 similar to protein gp49; phage replisome organizer 2630786..2632135 Clostridium beijerinckii NCIMB 8052 5293473 YP_001309386.1 CDS Cbei_2269 NC_009617.1 2632185 2632811 D KEGG: bha:BH3541 hypothetical protein; hypothetical protein 2632185..2632811 Clostridium beijerinckii NCIMB 8052 5293474 YP_001309387.1 CDS Cbei_2270 NC_009617.1 2632926 2633168 D TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: cac:CAC3649 possible stage V sporulation protein T, transcriptional regulator AbrB homolog; AbrB family transcriptional regulator 2632926..2633168 Clostridium beijerinckii NCIMB 8052 5293475 YP_001309388.1 CDS Cbei_2271 NC_009617.1 2633170 2633562 D hypothetical protein 2633170..2633562 Clostridium beijerinckii NCIMB 8052 5293476 YP_001309389.1 CDS Cbei_2272 NC_009617.1 2633641 2634396 D PFAM: BRO domain protein domain protein; KEGG: cth:Cthe_2462 BRO-like protein; prophage antirepressor 2633641..2634396 Clostridium beijerinckii NCIMB 8052 5293477 YP_001309390.1 CDS Cbei_2273 NC_009617.1 2634475 2634693 R KEGG: chy:CHY_0145 hypothetical protein; hypothetical protein complement(2634475..2634693) Clostridium beijerinckii NCIMB 8052 5293478 YP_001309391.1 CDS Cbei_2274 NC_009617.1 2634809 2635033 R hypothetical protein complement(2634809..2635033) Clostridium beijerinckii NCIMB 8052 5293479 YP_001309392.1 CDS Cbei_2275 NC_009617.1 2635168 2635884 D KEGG: cno:NT01CX_2185 hypothetical protein; hypothetical protein 2635168..2635884 Clostridium beijerinckii NCIMB 8052 5293480 YP_001309393.1 CDS Cbei_2276 NC_009617.1 2636931 2638634 D catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 2636931..2638634 Clostridium beijerinckii NCIMB 8052 5293481 YP_001309394.1 CDS Cbei_2277 NC_009617.1 2638796 2639509 D PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: ctc:CTC01876 transcriptional regulatory protein; Crp/Fnr family transcriptional regulator 2638796..2639509 Clostridium beijerinckii NCIMB 8052 5293482 YP_001309395.1 CDS Cbei_2278 NC_009617.1 2639635 2639868 D KEGG: gka:GK0762 hypothetical protein; hypothetical protein 2639635..2639868 Clostridium beijerinckii NCIMB 8052 5293483 YP_001309396.1 CDS Cbei_2279 NC_009617.1 2640133 2640294 D PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: sfu:Sfum_3222 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 2640133..2640294 Clostridium beijerinckii NCIMB 8052 5293484 YP_001309397.1 CDS Cbei_2280 NC_009617.1 2640589 2642247 D catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 2640589..2642247 Clostridium beijerinckii NCIMB 8052 5293485 YP_001309398.1 CDS Cbei_2281 NC_009617.1 2642515 2643288 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: btk:BT9727_1331 nitric oxide dioxygenase; oxidoreductase FAD/NAD(P)-binding subunit 2642515..2643288 Clostridium beijerinckii NCIMB 8052 5293486 YP_001309399.1 CDS Cbei_2282 NC_009617.1 2643321 2644787 D PFAM: aldehyde dehydrogenase; KEGG: cpe:CPE2438 NADP-dependent glyceraldehyde-3-phosphate dehydrogenas; aldehyde dehydrogenase 2643321..2644787 Clostridium beijerinckii NCIMB 8052 5293487 YP_001309400.1 CDS Cbei_2283 NC_009617.1 2644927 2645343 D TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: cac:CAC0587 flavodoxin; flavodoxin 2644927..2645343 Clostridium beijerinckii NCIMB 8052 5293488 YP_001309401.1 CDS Cbei_2284 NC_009617.1 2645460 2647094 R catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase complement(2645460..2647094) Clostridium beijerinckii NCIMB 8052 5293489 YP_001309402.1 CDS Cbei_2285 NC_009617.1 2647468 2647680 D hypothetical protein 2647468..2647680 Clostridium beijerinckii NCIMB 8052 5293490 YP_001309403.1 CDS Cbei_2287 NC_009617.1 2648508 2649200 D PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: ctc:CTC00656 conserved protein (peptidoglycan binding); ErfK/YbiS/YcfS/YnhG family protein 2648508..2649200 Clostridium beijerinckii NCIMB 8052 5296374 YP_001309404.1 CDS Cbei_2288 NC_009617.1 2649243 2649428 R hypothetical protein complement(2649243..2649428) Clostridium beijerinckii NCIMB 8052 5293492 YP_001309405.1 CDS Cbei_2289 NC_009617.1 2649797 2650141 D hypothetical protein 2649797..2650141 Clostridium beijerinckii NCIMB 8052 5293493 YP_001309406.1 CDS Cbei_2290 NC_009617.1 2650670 2650969 D hypothetical protein 2650670..2650969 Clostridium beijerinckii NCIMB 8052 5293494 YP_001309407.1 CDS Cbei_2291 NC_009617.1 2651199 2651474 D hypothetical protein 2651199..2651474 Clostridium beijerinckii NCIMB 8052 5293495 YP_001309408.1 CDS Cbei_2292 NC_009617.1 2652733 2654493 D PFAM: restriction endonuclease; KEGG: cph:Cpha266_1614 restriction endonuclease; restriction endonuclease 2652733..2654493 Clostridium beijerinckii NCIMB 8052 5293496 YP_001309409.1 CDS Cbei_2293 NC_009617.1 2654821 2655063 R hypothetical protein complement(2654821..2655063) Clostridium beijerinckii NCIMB 8052 5293497 YP_001309410.1 CDS Cbei_2294 NC_009617.1 2655668 2656066 D hypothetical protein 2655668..2656066 Clostridium beijerinckii NCIMB 8052 5293498 YP_001309411.1 CDS Cbei_2295 NC_009617.1 2657858 2658493 D PFAM: chloramphenicol acetyltransferase; KEGG: cac:CAC0235 chloramphenicol acetyltransferase; chloramphenicol O-acetyltransferase 2657858..2658493 Clostridium beijerinckii NCIMB 8052 5293499 YP_001309412.1 CDS Cbei_2296 NC_009617.1 2658617 2658901 D hypothetical protein 2658617..2658901 Clostridium beijerinckii NCIMB 8052 5293500 YP_001309413.1 CDS Cbei_2297 NC_009617.1 2659072 2659590 D hypothetical protein 2659072..2659590 Clostridium beijerinckii NCIMB 8052 5293501 YP_001309414.1 CDS Cbei_2298 NC_009617.1 2659815 2660015 R hypothetical protein complement(2659815..2660015) Clostridium beijerinckii NCIMB 8052 5293502 YP_001309415.1 CDS Cbei_2299 NC_009617.1 2660113 2660640 R hypothetical protein complement(2660113..2660640) Clostridium beijerinckii NCIMB 8052 5293503 YP_001309416.1 CDS Cbei_2300 NC_009617.1 2660928 2661170 D hypothetical protein 2660928..2661170 Clostridium beijerinckii NCIMB 8052 5293504 YP_001309417.1 CDS Cbei_2301 NC_009617.1 2661325 2663250 D KEGG: cpr:CPR_0832 hypothetical protein; hypothetical protein 2661325..2663250 Clostridium beijerinckii NCIMB 8052 5293505 YP_001309418.1 CDS Cbei_2302 NC_009617.1 2663334 2664410 D KEGG: cpe:CPE1288 hypothetical protein; hypothetical protein 2663334..2664410 Clostridium beijerinckii NCIMB 8052 5293506 YP_001309419.1 CDS Cbei_2303 NC_009617.1 2664511 2665077 R TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: ctc:pE88_11 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 factor complement(2664511..2665077) Clostridium beijerinckii NCIMB 8052 5293507 YP_001309420.1 CDS Cbei_2304 NC_009617.1 2665344 2666129 D PFAM: cell wall binding repeat-containing protein; cell wall hydrolase/autolysin; KEGG: ava:Ava_4396 peptidoglycan-binding domain 1; cell wall hydrolase/autolysin 2665344..2666129 Clostridium beijerinckii NCIMB 8052 5293508 YP_001309421.1 CDS Cbei_2305 NC_009617.1 2666464 2670039 D KEGG: pfa:MAL13P1.202 hypothetical protein; hypothetical protein 2666464..2670039 Clostridium beijerinckii NCIMB 8052 5293509 YP_001309422.1 CDS Cbei_2306 NC_009617.1 2671309 2672478 D PFAM: phage integrase family protein; KEGG: tte:TTE2127 integrase; phage integrase family protein 2671309..2672478 Clostridium beijerinckii NCIMB 8052 5293510 YP_001309423.1 CDS Cbei_2307 NC_009617.1 2673240 2673608 R KEGG: rme:Rmet_0127 cobalamin synthesis protein, P47K; hypothetical protein complement(2673240..2673608) Clostridium beijerinckii NCIMB 8052 5296375 YP_001309424.1 CDS Cbei_2308 NC_009617.1 2673967 2674218 D KEGG: ctc:CTC01538 hypothetical protein; hypothetical protein 2673967..2674218 Clostridium beijerinckii NCIMB 8052 5293512 YP_001309425.1 CDS Cbei_2309 NC_009617.1 2674829 2675653 D PFAM: anaerobic cobalt chelatase; KEGG: cpr:CPR_1242 anaerobic cobalt chelatase, CbiK; anaerobic cobalt chelatase 2674829..2675653 Clostridium beijerinckii NCIMB 8052 5293513 YP_001309426.1 CDS Cbei_2310 NC_009617.1 2675735 2677114 D responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 2675735..2677114 Clostridium beijerinckii NCIMB 8052 5293514 YP_001309427.1 CDS cbiC NC_009617.1 2677182 2677805 D catalyzes the interconversion of precorrin-8X and cobyrinic acid; precorrin-8X methylmutase 2677182..2677805 Clostridium beijerinckii NCIMB 8052 5293515 YP_001309428.1 CDS cbiD NC_009617.1 2677863 2679047 D Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase 2677863..2679047 Clostridium beijerinckii NCIMB 8052 5293516 YP_001309429.1 CDS Cbei_2313 NC_009617.1 2679159 2679773 D TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: cpf:CPF_1433 precorrin-6y C5,15-methyltransferase (decarboxylating); precorrin-6y C5,15-methyltransferase subunit CbiE 2679159..2679773 Clostridium beijerinckii NCIMB 8052 5293517 YP_001309430.1 CDS Cbei_2314 NC_009617.1 2679840 2680412 D TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: conserved hypothetical protein 95; KEGG: cpf:CPF_1432 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; precorrin-6y C5,15-methyltransferase subunit CbiT 2679840..2680412 Clostridium beijerinckii NCIMB 8052 5293518 YP_001309431.1 CDS Cbei_2315 NC_009617.1 2680560 2681225 D catalyzes the formation of precorrin-3A from precorrin-2; cobalt-precorrin-2 C(20)-methyltransferase 2680560..2681225 Clostridium beijerinckii NCIMB 8052 5293519 YP_001309432.1 CDS Cbei_2316 NC_009617.1 2681276 2682046 D TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ctc:CTC00736 precorrin-3 methylase; precorrin-4 C(11)-methyltransferase 2681276..2682046 Clostridium beijerinckii NCIMB 8052 5293520 YP_001309433.1 CDS Cbei_2317 NC_009617.1 2682033 2683166 D PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: cpe:CPE1221 precorrin methylase; cobalamin (vitamin B12) biosynthesis protein CbiG 2682033..2683166 Clostridium beijerinckii NCIMB 8052 5293521 YP_001309434.1 CDS Cbei_2318 NC_009617.1 2683262 2683894 D hypothetical protein 2683262..2683894 Clostridium beijerinckii NCIMB 8052 5293522 YP_001309435.1 CDS Cbei_2319 NC_009617.1 2684080 2684799 R PFAM: GntR family transcriptional regulator; UbiC transcription regulator-associated domain protein; KEGG: lpl:lp_2924 transcription regulator; GntR family transcriptional regulator complement(2684080..2684799) Clostridium beijerinckii NCIMB 8052 5293523 YP_001309436.1 CDS Cbei_2320 NC_009617.1 2685611 2687029 D TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: lmo:lmo1255 similar to PTS system trehalose specific enzyme IIBC; PTS system trehalose-specific transporter subunit IIBC 2685611..2687029 Clostridium beijerinckii NCIMB 8052 5293524 YP_001309437.1 CDS Cbei_2321 NC_009617.1 2687048 2688700 D TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: cpe:CPE0562 trehalose-6-phosphate hydrolase; alpha,alpha-phosphotrehalase 2687048..2688700 Clostridium beijerinckii NCIMB 8052 5293525 YP_001309438.1 CDS Cbei_2322 NC_009617.1 2689368 2689859 D PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: cac:CAC3602 HD superfamily hydrolase; metal dependent phosphohydrolase 2689368..2689859 Clostridium beijerinckii NCIMB 8052 5293526 YP_001309439.1 CDS Cbei_2323 NC_009617.1 2689881 2690321 D PFAM: GCN5-related N-acetyltransferase; KEGG: cpr:CPR_0856 acetyltransferase, GNAT family; N-acetyltransferase GCN5 2689881..2690321 Clostridium beijerinckii NCIMB 8052 5293527 YP_001309440.1 CDS Cbei_2324 NC_009617.1 2690473 2690793 R PFAM: protein of unknown function DUF1540; KEGG: cpr:CPR_2328 hypothetical protein; hypothetical protein complement(2690473..2690793) Clostridium beijerinckii NCIMB 8052 5293528 YP_001309441.1 CDS Cbei_2325 NC_009617.1 2690838 2691383 R PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: cpe:CPE2618 hypothetical protein; rubrerythrin complement(2690838..2691383) Clostridium beijerinckii NCIMB 8052 5293529 YP_001309442.1 CDS Cbei_2326 NC_009617.1 2691576 2692229 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: smu:SMU.1254 conserved hypothetical protein; HAD family hydrolase 2691576..2692229 Clostridium beijerinckii NCIMB 8052 5293530 YP_001309443.1 CDS Cbei_2327 NC_009617.1 2692421 2692603 D KEGG: cpr:CPR_2639 hypothetical protein; hypothetical protein 2692421..2692603 Clostridium beijerinckii NCIMB 8052 5293531 YP_001309444.1 CDS Cbei_2328 NC_009617.1 2692741 2693667 D PFAM: LysR family transcriptional regulator; KEGG: swo:Swol_0935 LysR-type transcriptional regulator; LysR family transcriptional regulator 2692741..2693667 Clostridium beijerinckii NCIMB 8052 5293532 YP_001309445.1 CDS Cbei_2329 NC_009617.1 2693688 2694809 D PFAM: Methionine synthase, vitamin-B12 independent; KEGG: eca:ECA1113 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; methionine synthase, vitamin-B12 independent 2693688..2694809 Clostridium beijerinckii NCIMB 8052 5293533 YP_001309446.1 CDS Cbei_2330 NC_009617.1 2694974 2696110 D PFAM: Methionine synthase, vitamin-B12 independent; KEGG: dsy:DSY3878 hypothetical protein; methionine synthase, vitamin-B12 independent 2694974..2696110 Clostridium beijerinckii NCIMB 8052 5293534 YP_001309447.1 CDS Cbei_2331 NC_009617.1 2696202 2696966 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sat:SYN_01581 endonuclease/exonuclease/phosphatase family protein; endonuclease/exonuclease/phosphatase 2696202..2696966 Clostridium beijerinckii NCIMB 8052 5293535 YP_001309448.1 CDS Cbei_2332 NC_009617.1 2697452 2697973 D PFAM: 3D domain protein; hypothetical protein 2697452..2697973 Clostridium beijerinckii NCIMB 8052 5293536 YP_001309449.1 CDS Cbei_2333 NC_009617.1 2698202 2698882 D PFAM: RelA/SpoT domain protein; KEGG: cac:CAC3340 uncharacterized conserved domain seen in the bacterial SpoT; RelA/SpoT domain-containing protein 2698202..2698882 Clostridium beijerinckii NCIMB 8052 5293537 YP_001309450.1 CDS Cbei_2334 NC_009617.1 2698896 2699462 D PFAM: nitroreductase; KEGG: sat:SYN_01293 oxygen-insensitive NAD(P)H nitroreductase / dihydropteridine reductase; nitroreductase 2698896..2699462 Clostridium beijerinckii NCIMB 8052 5293538 YP_001309451.1 CDS Cbei_2335 NC_009617.1 2699754 2699957 D PFAM: Heavy metal transport/detoxification protein; KEGG: cpf:CPF_1453 heavy-metal-associated domain protein; heavy metal transport/detoxification protein 2699754..2699957 Clostridium beijerinckii NCIMB 8052 5293539 YP_001309452.1 CDS Cbei_2336 NC_009617.1 2700056 2700463 R PFAM: protein of unknown function UPF0047; KEGG: cpf:CPF_0551 conserved hypothetical protein TIGR00149; hypothetical protein complement(2700056..2700463) Clostridium beijerinckii NCIMB 8052 5293540 YP_001309453.1 CDS Cbei_2337 NC_009617.1 2700930 2701385 D PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_2017 choline binding protein A; cell wall binding repeat-containing protein 2700930..2701385 Clostridium beijerinckii NCIMB 8052 5293541 YP_001309454.1 CDS Cbei_2338 NC_009617.1 2701567 2701956 R TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: cth:Cthe_3118 hemerythrin-like metal-binding protein; hemerythrin-like metal-binding protein complement(2701567..2701956) Clostridium beijerinckii NCIMB 8052 5293542 YP_001309455.1 CDS Cbei_2339 NC_009617.1 2702289 2702834 D PFAM: phosphoesterase, PA-phosphatase related; KEGG: cpr:CPR_1102 probable phosphatase; PA-phosphatase-like phosphoesterase 2702289..2702834 Clostridium beijerinckii NCIMB 8052 5293543 YP_001309456.1 CDS Cbei_2340 NC_009617.1 2703011 2703370 D KEGG: lic:LIC13297 hypothetical protein; hypothetical protein 2703011..2703370 Clostridium beijerinckii NCIMB 8052 5293544 YP_001309457.1 CDS Cbei_2341 NC_009617.1 2703468 2704145 D hypothetical protein 2703468..2704145 Clostridium beijerinckii NCIMB 8052 5293545 YP_001309458.1 CDS aspA NC_009617.1 2704292 2705722 R catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase complement(2704292..2705722) Clostridium beijerinckii NCIMB 8052 5293546 YP_001309459.1 CDS Cbei_2343 NC_009617.1 2706424 2706876 D PFAM: regulatory protein, AsnC/Lrp family; KEGG: lbu:LBUL_0439 transcriptional regulator; AsnC family transcriptional regulator 2706424..2706876 Clostridium beijerinckii NCIMB 8052 5293547 YP_001309460.1 CDS Cbei_2344 NC_009617.1 2707073 2707303 D hypothetical protein 2707073..2707303 Clostridium beijerinckii NCIMB 8052 5293548 YP_001309461.1 CDS Cbei_2345 NC_009617.1 2709196 2709402 D PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: sth:STH1431 small acid-soluble spore protein; small acid-soluble spore protein, alpha/beta type 2709196..2709402 Clostridium beijerinckii NCIMB 8052 5293549 YP_001309462.1 CDS Cbei_2346 NC_009617.1 2709672 2709833 D hypothetical protein 2709672..2709833 Clostridium beijerinckii NCIMB 8052 5293550 YP_001309463.1 CDS Cbei_2347 NC_009617.1 2709984 2710214 D hypothetical protein 2709984..2710214 Clostridium beijerinckii NCIMB 8052 5293551 YP_001309464.1 CDS Cbei_2348 NC_009617.1 2710802 2711308 D hypothetical protein 2710802..2711308 Clostridium beijerinckii NCIMB 8052 5293552 YP_001309465.1 CDS Cbei_2349 NC_009617.1 2711627 2711932 D hypothetical protein 2711627..2711932 Clostridium beijerinckii NCIMB 8052 5293553 YP_001309466.1 CDS Cbei_2350 NC_009617.1 2712567 2713481 D PFAM: polysaccharide deacetylase; KEGG: cpr:CPR_0367 predicted xylanase/chitin deacetilase; polysaccharide deacetylase 2712567..2713481 Clostridium beijerinckii NCIMB 8052 5293554 YP_001309467.1 CDS Cbei_2351 NC_009617.1 2713694 2713963 D ACT domain-containing protein; hypothetical protein 2713694..2713963 Clostridium beijerinckii NCIMB 8052 5293555 YP_001309468.1 CDS Cbei_2352 NC_009617.1 2713976 2715331 D PFAM: protein of unknown function DUF711; KEGG: lin:lin0538 similar to unknown proteins; hypothetical protein 2713976..2715331 Clostridium beijerinckii NCIMB 8052 5293556 YP_001309469.1 CDS Cbei_2353 NC_009617.1 2715997 2717976 D PFAM: Radical SAM domain protein; Radical SAM N-terminal domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cpe:CPE1196 hypothetical protein; hypothetical protein 2715997..2717976 Clostridium beijerinckii NCIMB 8052 5293557 YP_001309470.1 CDS Cbei_2354 NC_009617.1 2718243 2719154 D PFAM: Auxin Efflux Carrier; KEGG: blo:BL0281 hypothetical protein; auxin efflux carrier 2718243..2719154 Clostridium beijerinckii NCIMB 8052 5293558 YP_001309471.1 CDS Cbei_2355 NC_009617.1 2719410 2720174 D TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cth:Cthe_0458 exodeoxyribonuclease III Xth; exodeoxyribonuclease III Xth 2719410..2720174 Clostridium beijerinckii NCIMB 8052 5293559 YP_001309472.1 CDS Cbei_2356 NC_009617.1 2720236 2720913 R PFAM: protein of unknown function DUF624; KEGG: rle:pRL120660 transmembrane protein; hypothetical protein complement(2720236..2720913) Clostridium beijerinckii NCIMB 8052 5293560 YP_001309473.1 CDS Cbei_2357 NC_009617.1 2721474 2722820 D PFAM: extracellular solute-binding protein, family 1; KEGG: bha:BH0905 L-arabinose transport system substrate-binding protein; extracellular solute-binding protein 2721474..2722820 Clostridium beijerinckii NCIMB 8052 5293561 YP_001309474.1 CDS Cbei_2358 NC_009617.1 2722917 2723807 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bld:BLi03023 L-arabinose transport (integral membrane protein); RBL00917; binding-protein-dependent transport system inner membrane protein 2722917..2723807 Clostridium beijerinckii NCIMB 8052 5293562 YP_001309475.1 CDS Cbei_2359 NC_009617.1 2723809 2724699 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BG11912 L-arabinose transport system permease; monosaccharide-transporting ATPase 2723809..2724699 Clostridium beijerinckii NCIMB 8052 5293563 YP_001309476.1 CDS Cbei_2360 NC_009617.1 2724763 2726280 D PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: cth:Cthe_2548 alpha-N-arabinofuranosidase; alpha-N-arabinofuranosidase 2724763..2726280 Clostridium beijerinckii NCIMB 8052 5293564 YP_001309477.1 CDS Cbei_2361 NC_009617.1 2726387 2727310 R PFAM: ArsR family transcriptional regulator; Helix-turn-helix, type 11 domain protein; KEGG: bha:BH1869 hypothetical protein; ArsR family transcriptional regulator complement(2726387..2727310) Clostridium beijerinckii NCIMB 8052 5293565 YP_001309478.1 CDS Cbei_2362 NC_009617.1 2727513 2728409 R PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: bcl:ABC1211 transcriptional regulator, AraC/XylS family; helix-turn-helix domain-containing protein complement(2727513..2728409) Clostridium beijerinckii NCIMB 8052 5293566 YP_001309479.1 CDS Cbei_2363 NC_009617.1 2728599 2730551 D PFAM: protein of unknown function DUF1680; KEGG: bcl:ABC1212 hypothetical protein; hypothetical protein 2728599..2730551 Clostridium beijerinckii NCIMB 8052 5293567 YP_001309480.1 CDS Cbei_2364 NC_009617.1 2730663 2731835 D PFAM: 3-dehydroquinate synthase; KEGG: bha:BH1862 L-arabinose utilization protein; glycerol-1-phosphate dehydrogenase 2730663..2731835 Clostridium beijerinckii NCIMB 8052 5293568 YP_001309481.1 CDS Cbei_2365 NC_009617.1 2731840 2732631 D TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: fnu:FN1255 nagD protein; HAD family hydrolase 2731840..2732631 Clostridium beijerinckii NCIMB 8052 5293569 YP_001309482.1 CDS Cbei_2366 NC_009617.1 2733071 2733673 D PFAM: NUDIX hydrolase; KEGG: cpf:CPF_0882 pyrophosphatase, MutT/NUDIX family; NUDIX hydrolase 2733071..2733673 Clostridium beijerinckii NCIMB 8052 5293570 YP_001309483.1 CDS Cbei_2367 NC_009617.1 2734373 2735074 D TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase; KEGG: bat:BAS2602 ribose 5-phosphate isomerase; ribose 5-phosphate isomerase 2734373..2735074 Clostridium beijerinckii NCIMB 8052 5293571 YP_001309484.1 CDS Cbei_2368 NC_009617.1 2735116 2735550 D PFAM: GCN5-related N-acetyltransferase; KEGG: mba:Mbar_A3286 acetyltransferase, GNAT family; N-acetyltransferase GCN5 2735116..2735550 Clostridium beijerinckii NCIMB 8052 5293572 YP_001309485.1 CDS Cbei_2369 NC_009617.1 2735586 2736443 D SMART: ATPase AAA; KEGG: dsy:DSY3658 hypothetical protein; ATPase AAA 2735586..2736443 Clostridium beijerinckii NCIMB 8052 5293573 YP_001309486.1 CDS Cbei_2370 NC_009617.1 2736514 2736690 D KEGG: cac:CAC0369 predicted acetyltransferase; acetyltransferase 2736514..2736690 Clostridium beijerinckii NCIMB 8052 5293574 YP_001309487.1 CDS Cbei_2371 NC_009617.1 2737005 2737556 D hypothetical protein 2737005..2737556 Clostridium beijerinckii NCIMB 8052 5293575 YP_001309488.1 CDS Cbei_2372 NC_009617.1 2737809 2738174 R PFAM: Carboxymuconolactone decarboxylase; KEGG: hhe:HH1468 4-carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase complement(2737809..2738174) Clostridium beijerinckii NCIMB 8052 5293576 YP_001309489.1 CDS Cbei_2373 NC_009617.1 2738254 2738616 D PFAM: regulatory protein, MerR; KEGG: lin:lin0806 hypothetical protein; MerR family transcriptional regulator 2738254..2738616 Clostridium beijerinckii NCIMB 8052 5293577 YP_001309490.1 CDS Cbei_2374 NC_009617.1 2738669 2739253 D KEGG: cac:CAC0722 predicted membrane protein; CF-9 family; CF-9 family membrane protein 2738669..2739253 Clostridium beijerinckii NCIMB 8052 5293578 YP_001309491.1 CDS Cbei_2375 NC_009617.1 2739234 2739647 R PFAM: regulatory protein, AsnC/Lrp family; KEGG: bsu:BG12123 transcriptional regulator (Lrp family); AsnC family transcriptional regulator complement(2739234..2739647) Clostridium beijerinckii NCIMB 8052 5293579 YP_001309492.1 CDS Cbei_2376 NC_009617.1 2739773 2740318 D PFAM: isochorismatase hydrolase; KEGG: gsu:GSU0569 isochorismatase family protein; isochorismatase hydrolase 2739773..2740318 Clostridium beijerinckii NCIMB 8052 5293580 YP_001309493.1 CDS Cbei_2377 NC_009617.1 2740798 2741778 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bha:BH3840 sugar ABC transporter (sugar-binding protein); periplasmic binding protein/LacI transcriptional regulator 2740798..2741778 Clostridium beijerinckii NCIMB 8052 5293581 YP_001309494.1 CDS Cbei_2378 NC_009617.1 2741891 2743264 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase internal region; KEGG: tte:TTE0287 predicted ATPase; signal transduction histidine kinase LytS 2741891..2743264 Clostridium beijerinckii NCIMB 8052 5293582 YP_001309495.1 CDS Cbei_2379 NC_009617.1 2743242 2744582 D PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: tte:TTE0288 CheY-like receiver domains; response regulator receiver protein 2743242..2744582 Clostridium beijerinckii NCIMB 8052 5293583 YP_001309496.1 CDS Cbei_2380 NC_009617.1 2744876 2745955 D TIGRFAM: D-xylose ABC transporter periplasmic protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: mta:Moth_2022 periplasmic binding protein/LacI transcriptional regulator; D-xylose ABC transporter periplasmic protein 2744876..2745955 Clostridium beijerinckii NCIMB 8052 5293584 YP_001309497.1 CDS Cbei_2381 NC_009617.1 2746020 2747597 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ecv:APECO1_2882 ABC-type xylose transport system, ATPase component XylG; sugar ABC transporter ATPase 2746020..2747597 Clostridium beijerinckii NCIMB 8052 5293585 YP_001309498.1 CDS Cbei_2382 NC_009617.1 2747599 2748768 D PFAM: inner-membrane translocator; KEGG: mta:Moth_2020 inner-membrane translocator; monosaccharide-transporting ATPase 2747599..2748768 Clostridium beijerinckii NCIMB 8052 5293586 YP_001309499.1 CDS Cbei_2383 NC_009617.1 2749301 2750626 D TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bca:BCE_2210 xylose isomerase; xylose isomerase 2749301..2750626 Clostridium beijerinckii NCIMB 8052 5293587 YP_001309500.1 CDS Cbei_2384 NC_009617.1 2751087 2752589 D TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: cac:CAC2612 xylulose kinase; xylulokinase 2751087..2752589 Clostridium beijerinckii NCIMB 8052 5293588 YP_001309501.1 CDS Cbei_2385 NC_009617.1 2752779 2753927 D PFAM: ROK family protein; KEGG: cac:CAC3673 XylR transcriptional regulator; ROK family protein 2752779..2753927 Clostridium beijerinckii NCIMB 8052 5293589 YP_001309502.1 CDS Cbei_2386 NC_009617.1 2754275 2754922 D TIGRFAM: transaldolase; PFAM: Transaldolase; KEGG: lwe:lwe2691 transaldolase; transaldolase 2754275..2754922 Clostridium beijerinckii NCIMB 8052 5293590 YP_001309503.1 CDS Cbei_2387 NC_009617.1 2755573 2757564 D TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; KEGG: cac:CAC1348 transketolase, TKT; transketolase 2755573..2757564 Clostridium beijerinckii NCIMB 8052 5293591 YP_001309504.1 CDS Cbei_2388 NC_009617.1 2757892 2758515 D KEGG: cac:CAC2611 hypothetical protein; hypothetical protein 2757892..2758515 Clostridium beijerinckii NCIMB 8052 5293592 YP_001309505.1 CDS Cbei_2389 NC_009617.1 2758809 2760281 D KEGG: cac:CAC2610 L-fucose isomerase related protein; L-fucose isomerase-like protein 2758809..2760281 Clostridium beijerinckii NCIMB 8052 5293593 YP_001309506.1 CDS Cbei_2390 NC_009617.1 2760938 2761606 D PFAM: GntR family transcriptional regulator; GntR domain protein; Helix-turn-helix, type 11 domain protein; KEGG: mta:Moth_0073 transcriptional regulator, GntR family; GntR family transcriptional regulator 2760938..2761606 Clostridium beijerinckii NCIMB 8052 5293594 YP_001309507.1 CDS Cbei_2391 NC_009617.1 2761774 2762559 D PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; KEGG: cac:CAC0111 glutamine-binding periplasmic protein fused to glutamine permease; extracellular solute-binding protein 2761774..2762559 Clostridium beijerinckii NCIMB 8052 5293595 YP_001309508.1 CDS Cbei_2394 NC_009617.1 2764482 2765210 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC0112 glutamine ABC transporter (ATP-binding protein); ABC transporter 2764482..2765210 Clostridium beijerinckii NCIMB 8052 5293597 YP_001309509.1 CDS Cbei_2395 NC_009617.1 2765468 2766478 D TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase; KEGG: hhe:HH0662 L-asparaginase; type II L-asparaginase 2765468..2766478 Clostridium beijerinckii NCIMB 8052 5293598 YP_001309510.1 CDS Cbei_2396 NC_009617.1 2767396 2768328 D KEGG: ctc:CTC01798 hypothetical protein; hypothetical protein 2767396..2768328 Clostridium beijerinckii NCIMB 8052 5293599 YP_001309511.1 CDS Cbei_2397 NC_009617.1 2768360 2769295 D PFAM: peptidase M19, renal dipeptidase; KEGG: cpf:CPF_2183 dipeptidase family protein; membrane dipeptidase 2768360..2769295 Clostridium beijerinckii NCIMB 8052 5293600 YP_001309512.1 CDS fabG NC_009617.1 2769531 2770274 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 2769531..2770274 Clostridium beijerinckii NCIMB 8052 5293601 YP_001309513.1 CDS Cbei_2399 NC_009617.1 2770286 2771806 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cpr:CPR_1892 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase complement(2770286..2771806) Clostridium beijerinckii NCIMB 8052 5293602 YP_001309514.1 CDS Cbei_2400 NC_009617.1 2771807 2772478 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cpf:CPF_2180 DNA-binding response regulator; two component transcriptional regulator complement(2771807..2772478) Clostridium beijerinckii NCIMB 8052 5293603 YP_001309515.1 CDS Cbei_2401 NC_009617.1 2773176 2774417 D PFAM: peptidase M16 domain protein; KEGG: cno:NT01CX_1702 peptidase, M16 family; peptidase M16 domain-containing protein 2773176..2774417 Clostridium beijerinckii NCIMB 8052 5293604 YP_001309516.1 CDS recX NC_009617.1 2774453 2775094 D binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 2774453..2775094 Clostridium beijerinckii NCIMB 8052 5293605 YP_001309517.1 CDS Cbei_2403 NC_009617.1 2775233 2775952 D PFAM: transglutaminase domain protein; KEGG: cac:CAC2409 transglutaminase-like enzyme, cysteine protease; transglutaminase domain-containing protein 2775233..2775952 Clostridium beijerinckii NCIMB 8052 5293606 YP_001309518.1 CDS Cbei_2404 NC_009617.1 2775954 2776310 R PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: ctc:CTC02335 hypothetical protein; hypothetical protein complement(2775954..2776310) Clostridium beijerinckii NCIMB 8052 5293607 YP_001309519.1 CDS Cbei_2405 NC_009617.1 2776527 2780840 D TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: cth:Cthe_1329 CoA-substrate-specific enzyme activase; CoA-substrate-specific enzyme activase 2776527..2780840 Clostridium beijerinckii NCIMB 8052 5293608 YP_001309520.1 CDS Cbei_2406 NC_009617.1 2781068 2782108 D KEGG: ctc:CTC00791 hypothetical protein; hypothetical protein 2781068..2782108 Clostridium beijerinckii NCIMB 8052 5293609 YP_001309521.1 CDS Cbei_2407 NC_009617.1 2782201 2783268 D KEGG: ctc:CTC00792 hypothetical protein; hypothetical protein 2782201..2783268 Clostridium beijerinckii NCIMB 8052 5293610 YP_001309522.1 CDS Cbei_2408 NC_009617.1 2783461 2784231 D hypothetical protein 2783461..2784231 Clostridium beijerinckii NCIMB 8052 5293611 YP_001309523.1 CDS Cbei_2409 NC_009617.1 2784308 2785168 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: cpr:CPR_1317 hypothetical protein; hypothetical protein 2784308..2785168 Clostridium beijerinckii NCIMB 8052 5293612 YP_001309524.1 CDS Cbei_2410 NC_009617.1 2785312 2785728 D TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: cac:CAC0587 flavodoxin; flavodoxin 2785312..2785728 Clostridium beijerinckii NCIMB 8052 5293613 YP_001309525.1 CDS Cbei_2411 NC_009617.1 2785751 2786386 D KEGG: cpr:CPR_0610 hypothetical protein; hypothetical protein 2785751..2786386 Clostridium beijerinckii NCIMB 8052 5293614 YP_001309526.1 CDS Cbei_2412 NC_009617.1 2786979 2787518 D PFAM: NUDIX hydrolase; KEGG: cpf:CPF_0794 hydrolase, NUDIX family; NUDIX hydrolase 2786979..2787518 Clostridium beijerinckii NCIMB 8052 5293615 YP_001309527.1 CDS Cbei_2413 NC_009617.1 2788138 2789481 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cac:CAC1611 probable cation efflux pump (multidrug resistance protein); MATE efflux family protein 2788138..2789481 Clostridium beijerinckii NCIMB 8052 5293616 YP_001309528.1 CDS uvsE NC_009617.1 2789810 2790772 D PFAM: UV-endonuclease UvdE; KEGG: cth:Cthe_1958 UV-endonuclease UvdE; UV damage endonuclease 2789810..2790772 Clostridium beijerinckii NCIMB 8052 5293617 YP_001309529.1 CDS Cbei_2415 NC_009617.1 2791002 2792027 D PFAM: cell wall binding repeat-containing protein; SMART: transglutaminase domain protein; KEGG: bca:BCE_1072 S-layer protein; cell wall binding repeat-containing protein 2791002..2792027 Clostridium beijerinckii NCIMB 8052 5293618 YP_001309530.1 CDS Cbei_2416 NC_009617.1 2792506 2793717 D catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 2792506..2793717 Clostridium beijerinckii NCIMB 8052 5293619 YP_001309531.1 CDS Cbei_2417 NC_009617.1 2793816 2794997 R PFAM: protein of unknown function UPF0118; KEGG: cpr:CPR_0707 probable permease; hypothetical protein complement(2793816..2794997) Clostridium beijerinckii NCIMB 8052 5293620 YP_001309532.1 CDS Cbei_2418 NC_009617.1 2795099 2796607 R PFAM: Ppx/GppA phosphatase; KEGG: cac:CAC0621 exopolyphosphatase; Ppx/GppA phosphatase complement(2795099..2796607) Clostridium beijerinckii NCIMB 8052 5293621 YP_001309533.1 CDS Cbei_2419 NC_009617.1 2796811 2798859 D catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 2796811..2798859 Clostridium beijerinckii NCIMB 8052 5293622 YP_001309534.1 CDS Cbei_2420 NC_009617.1 2799084 2799653 D PFAM: cell wall binding repeat-containing protein; KEGG: cpe:CPE0570 hypothetical protein; cell wall binding repeat-containing protein 2799084..2799653 Clostridium beijerinckii NCIMB 8052 5293623 YP_001309535.1 CDS Cbei_2421 NC_009617.1 2800166 2801329 D PFAM: iron-containing alcohol dehydrogenase; KEGG: ctc:CTC00408 NADH-dependent butanol dehydrogenase A; iron-containing alcohol dehydrogenase 2800166..2801329 Clostridium beijerinckii NCIMB 8052 5293624 YP_001309536.1 CDS Cbei_2422 NC_009617.1 2801478 2802335 D PFAM: peptidase U61, LD-carboxypeptidase A; KEGG: cpe:CPE2462 probable microcin immunity protein; peptidase U61, LD-carboxypeptidase A 2801478..2802335 Clostridium beijerinckii NCIMB 8052 5293625 YP_001309537.1 CDS Cbei_2423 NC_009617.1 2802471 2803940 D KEGG: tde:TDE2076 hypothetical protein; hypothetical protein 2802471..2803940 Clostridium beijerinckii NCIMB 8052 5293626 YP_001309538.1 CDS Cbei_2424 NC_009617.1 2804000 2806969 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; KEGG: tde:TDE2075 GGDEF domain/EAL domain protein; diguanylate cyclase/phosphodiesterase 2804000..2806969 Clostridium beijerinckii NCIMB 8052 5293627 YP_001309539.1 CDS Cbei_2425 NC_009617.1 2807001 2808734 D PFAM: protein of unknown function DUF342; KEGG: cac:CAC2225 hypothetical protein; hypothetical protein 2807001..2808734 Clostridium beijerinckii NCIMB 8052 5293628 YP_001309540.1 CDS Cbei_2426 NC_009617.1 2809129 2810481 D TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: cpr:CPR_0384 xanthine permease; uracil-xanthine permease 2809129..2810481 Clostridium beijerinckii NCIMB 8052 5293629 YP_001309541.1 CDS Cbei_2427 NC_009617.1 2810483 2811055 D Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase 2810483..2811055 Clostridium beijerinckii NCIMB 8052 5293630 YP_001309542.1 CDS Cbei_2428 NC_009617.1 2811480 2812700 D catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 2811480..2812700 Clostridium beijerinckii NCIMB 8052 5293631 YP_001309543.1 CDS Cbei_2429 NC_009617.1 2813317 2813574 R hypothetical protein complement(2813317..2813574) Clostridium beijerinckii NCIMB 8052 5293632 YP_001309544.1 CDS Cbei_2430 NC_009617.1 2813821 2815578 D PFAM: helicase domain protein; KEGG: cac:CAC0778 ATP-dependent RNA helicase, superfamily II; helicase domain-containing protein 2813821..2815578 Clostridium beijerinckii NCIMB 8052 5293633 YP_001309545.1 CDS Cbei_2431 NC_009617.1 2815832 2816527 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY3619 hypothetical protein; ABC transporter 2815832..2816527 Clostridium beijerinckii NCIMB 8052 5293634 YP_001309546.1 CDS Cbei_2432 NC_009617.1 2816854 2817945 D Catalyzes the formation of PRPP from ATP and ribose 5-phosphate; phosphoribosylpyrophosphate synthetase 2816854..2817945 Clostridium beijerinckii NCIMB 8052 5293635 YP_001309547.1 CDS Cbei_2433 NC_009617.1 2818099 2818368 R hypothetical protein complement(2818099..2818368) Clostridium beijerinckii NCIMB 8052 5293636 YP_001309548.1 CDS Cbei_2434 NC_009617.1 2818946 2819941 D PFAM: NLP/P60 protein; KEGG: ctc:CTC00227 cell wall-associated hydrolase; NLP/P60 protein 2818946..2819941 Clostridium beijerinckii NCIMB 8052 5293637 YP_001309549.1 CDS Cbei_2435 NC_009617.1 2820017 2821894 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cac:CAC0903 sensory transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase complement(2820017..2821894) Clostridium beijerinckii NCIMB 8052 5293638 YP_001309550.1 CDS Cbei_2436 NC_009617.1 2822347 2823249 D TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cac:CAC0749 HD hydrolase superfamily protein; metal dependent phosphohydrolase 2822347..2823249 Clostridium beijerinckii NCIMB 8052 5293639 YP_001309551.1 CDS Cbei_2437 NC_009617.1 2823276 2823563 D PFAM: protein of unknown function DUF503; KEGG: cac:CAC0740 uncharacterized conserved protein, YlxP family; hypothetical protein 2823276..2823563 Clostridium beijerinckii NCIMB 8052 5293640 YP_001309552.1 CDS Cbei_2438 NC_009617.1 2823750 2824778 R catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase complement(2823750..2824778) Clostridium beijerinckii NCIMB 8052 5293641 YP_001309553.1 CDS Cbei_2439 NC_009617.1 2825168 2826145 D PFAM: cytochrome b5; KEGG: bur:Bcep18194_A5862 hypothetical protein; cytochrome b5 2825168..2826145 Clostridium beijerinckii NCIMB 8052 5293642 YP_001309554.1 CDS Cbei_2440 NC_009617.1 2826446 2826991 R KEGG: bcl:ABC3324 hypothetical protein; hypothetical protein complement(2826446..2826991) Clostridium beijerinckii NCIMB 8052 5293643 YP_001309555.1 CDS Cbei_2441 NC_009617.1 2827342 2827899 D PFAM: NUDIX hydrolase; KEGG: cpf:CPF_0662 hydrolase, NUDIX family; NUDIX hydrolase 2827342..2827899 Clostridium beijerinckii NCIMB 8052 5293644 YP_001309556.1 CDS Cbei_2442 NC_009617.1 2828066 2828593 D PFAM: Phosphoesterase, HXTX; KEGG: cac:CAC1603 diverged enzyme related to 2'-5' RNA ligase, ortholog YJCG B.subtilis; phosphoesterase, HXTX 2828066..2828593 Clostridium beijerinckii NCIMB 8052 5293645 YP_001309557.1 CDS Cbei_2443 NC_009617.1 2828699 2829475 R PFAM: YibE/F family protein; KEGG: cac:CAC0889 hypothetical protein; hypothetical protein complement(2828699..2829475) Clostridium beijerinckii NCIMB 8052 5293646 YP_001309558.1 CDS Cbei_2444 NC_009617.1 2829480 2830640 R PFAM: YibE/F family protein; KEGG: cac:CAC0890 uncharacterized conserved membrane protein; hypothetical protein complement(2829480..2830640) Clostridium beijerinckii NCIMB 8052 5293647 YP_001309559.1 CDS Cbei_2445 NC_009617.1 2830938 2831960 D KEGG: lac:LBA1611 surface protein; hypothetical protein 2830938..2831960 Clostridium beijerinckii NCIMB 8052 5293648 YP_001309560.1 CDS Cbei_2446 NC_009617.1 2832663 2833658 D catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; ornithine carbamoyltransferase 2832663..2833658 Clostridium beijerinckii NCIMB 8052 5293649 YP_001309561.1 CDS Cbei_2447 NC_009617.1 2833789 2834067 R PFAM: GCN5-related N-acetyltransferase; KEGG: ssp:SSP0387 acetyltransferase; N-acetyltransferase GCN5 complement(2833789..2834067) Clostridium beijerinckii NCIMB 8052 5293650 YP_001309562.1 CDS Cbei_2448 NC_009617.1 2834693 2835103 D PFAM: Positive regulator of sigma(E), RseC/MucC; KEGG: cno:NT01CX_0096 positive regulator of sigma(E), RseC/MucC superfamily; sigma E positive regulator RseC/MucC 2834693..2835103 Clostridium beijerinckii NCIMB 8052 5293651 YP_001309563.1 CDS Cbei_2449 NC_009617.1 2835283 2836596 D TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: tma:TM0244 electron transport complex protein; RnfABCDGE type electron transport complex subunit C 2835283..2836596 Clostridium beijerinckii NCIMB 8052 5293652 YP_001309564.1 CDS Cbei_2450 NC_009617.1 2836613 2837650 D TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: sat:SYN_01663 sodium-translocating NADH-quinone reductase subunit B; RnfABCDGE type electron transport complex subunit D 2836613..2837650 Clostridium beijerinckii NCIMB 8052 5293653 YP_001309565.1 CDS Cbei_2451 NC_009617.1 2837655 2838221 D TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: cno:NT01CX_1581 RnfG/NqrC; RnfABCDGE type electron transport complex subunit G 2837655..2838221 Clostridium beijerinckii NCIMB 8052 5293654 YP_001309566.1 CDS Cbei_2452 NC_009617.1 2838223 2838846 D PFAM: RnfA-Nqr electron transport subunit; KEGG: pca:Pcar_0260 NADH-ubiquinone oxidoreductase; RnfA-Nqr electron transport subunit 2838223..2838846 Clostridium beijerinckii NCIMB 8052 5293655 YP_001309567.1 CDS Cbei_2453 NC_009617.1 2838846 2839421 D PFAM: RnfA-Nqr electron transport subunit; KEGG: yps:YPTB2167 membrane protein; RnfA-Nqr electron transport subunit 2838846..2839421 Clostridium beijerinckii NCIMB 8052 5293656 YP_001309568.1 CDS Cbei_2454 NC_009617.1 2839440 2840291 D TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: sat:SYN_00628 sodium-translocating NADH-quinone reductase, subunit; RnfABCDGE type electron transport complex subunit B 2839440..2840291 Clostridium beijerinckii NCIMB 8052 5293657 YP_001309569.1 CDS Cbei_2455 NC_009617.1 2840458 2840988 R PFAM: Heptaprenyl diphosphate synthase component I; KEGG: cpf:CPF_2488 hypothetical protein; heptaprenyl diphosphate synthase component I complement(2840458..2840988) Clostridium beijerinckii NCIMB 8052 5293658 YP_001309570.1 CDS Cbei_2456 NC_009617.1 2840981 2841370 R PFAM: protein of unknown function DUF1312; KEGG: cno:NT01CX_0721 hypothetical protein; hypothetical protein complement(2840981..2841370) Clostridium beijerinckii NCIMB 8052 5293659 YP_001309571.1 CDS Cbei_2457 NC_009617.1 2841705 2842703 D PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: cac:CAC0693 transcriptional regulator of the LacI family; alanine racemase 2841705..2842703 Clostridium beijerinckii NCIMB 8052 5293660 YP_001309572.1 CDS Cbei_2458 NC_009617.1 2842975 2843811 D 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase 2842975..2843811 Clostridium beijerinckii NCIMB 8052 5293661 YP_001309573.1 CDS Cbei_2459 NC_009617.1 2844290 2845312 D transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease 2844290..2845312 Clostridium beijerinckii NCIMB 8052 5293662 YP_001309574.1 CDS Cbei_2460 NC_009617.1 2845752 2848697 D TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; Cache domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: chy:CHY_1906 sensory box/GGDEF domain/EAL domain protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 2845752..2848697 Clostridium beijerinckii NCIMB 8052 5293663 YP_001309575.1 CDS Cbei_2461 NC_009617.1 2848855 2849304 D this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 2848855..2849304 Clostridium beijerinckii NCIMB 8052 5293664 YP_001309576.1 CDS Cbei_2462 NC_009617.1 2849421 2850386 R PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: bce:BC2482 hypothetical cytosolic protein; hypothetical protein complement(2849421..2850386) Clostridium beijerinckii NCIMB 8052 5293665 YP_001309577.1 CDS Cbei_2463 NC_009617.1 2850610 2851713 D PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: ctc:CTC00941 cobalamin synthesis protein CobW; cobalamin synthesis protein, P47K 2850610..2851713 Clostridium beijerinckii NCIMB 8052 5293666 YP_001309578.1 CDS Cbei_2464 NC_009617.1 2852647 2853585 D KEGG: cpr:CPR_0043 hypothetical protein; G3E family GTPase-like protein 2852647..2853585 Clostridium beijerinckii NCIMB 8052 5293667 YP_001309579.1 CDS Cbei_2465 NC_009617.1 2853694 2854533 R TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: cpe:CPE0820 conserved hypothetical protein; HAD family hydrolase complement(2853694..2854533) Clostridium beijerinckii NCIMB 8052 5293668 YP_001309580.1 CDS Cbei_2466 NC_009617.1 2854781 2855530 D PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: oih:OB2808 transcriptional repressor of phosphotransferase system; DeoR family transcriptional regulator 2854781..2855530 Clostridium beijerinckii NCIMB 8052 5293669 YP_001309581.1 CDS Cbei_2467 NC_009617.1 2855584 2857575 R PFAM: fructose-1,6-bisphosphatase; KEGG: cac:CAC1572 fructose-1,6-bisphosphatase; fructose-1,6-bisphosphatase complement(2855584..2857575) Clostridium beijerinckii NCIMB 8052 5293670 YP_001309582.1 CDS Cbei_2468 NC_009617.1 2857711 2859891 R TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: ter:Tery_5016 glycogen debranching enzyme GlgX; glycogen debranching protein GlgX complement(2857711..2859891) Clostridium beijerinckii NCIMB 8052 5293671 YP_001309583.1 CDS Cbei_2469 NC_009617.1 2860241 2861299 D PFAM: cell wall binding repeat-containing protein; KEGG: cpe:CPE0626 hypothetical protein; cell wall binding repeat-containing protein 2860241..2861299 Clostridium beijerinckii NCIMB 8052 5293672 YP_001309584.1 CDS Cbei_2470 NC_009617.1 2861505 2861711 R PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: cac:CAC1522 small acid-soluble spore protein; small acid-soluble spore protein, alpha/beta type complement(2861505..2861711) Clostridium beijerinckii NCIMB 8052 5293673 YP_001309585.1 CDS Cbei_2471 NC_009617.1 2861925 2862119 D PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: cac:CAC2365 small acid-soluble spore protein; small acid-soluble spore protein, alpha/beta type 2861925..2862119 Clostridium beijerinckii NCIMB 8052 5293674 YP_001309586.1 CDS Cbei_2473 NC_009617.1 2863543 2864577 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: bce:BC1957 two component system histidine kinase; integral membrane sensor signal transduction histidine kinase complement(2863543..2864577) Clostridium beijerinckii NCIMB 8052 5296376 YP_001309587.1 CDS Cbei_2474 NC_009617.1 2864570 2865247 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: lme:LEUM_0956 DNA-binding response regulator, OmpR family (Rec-wHTH domains); two component transcriptional regulator complement(2864570..2865247) Clostridium beijerinckii NCIMB 8052 5293676 YP_001309588.1 CDS Cbei_2475 NC_009617.1 2865706 2866320 D PFAM: regulatory protein, TetR; KEGG: rha:RHA1_ro05404 transcriptional regulator, TetR family; TetR family transcriptional regulator 2865706..2866320 Clostridium beijerinckii NCIMB 8052 5293677 YP_001309589.1 CDS Cbei_2476 NC_009617.1 2866380 2867675 D TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aba:Acid345_0308 secretion protein HlyD; RND family efflux transporter MFP subunit 2866380..2867675 Clostridium beijerinckii NCIMB 8052 5293678 YP_001309590.1 CDS Cbei_2477 NC_009617.1 2867688 2870777 D PFAM: acriflavin resistance protein; KEGG: sfu:Sfum_0763 acriflavin resistance protein; acriflavin resistance protein 2867688..2870777 Clostridium beijerinckii NCIMB 8052 5293679 YP_001309591.1 CDS Cbei_2478 NC_009617.1 2871011 2872291 D KEGG: cth:Cthe_1764 outer membrane protein-like protein; hypothetical protein 2871011..2872291 Clostridium beijerinckii NCIMB 8052 5293680 YP_001309592.1 CDS Cbei_2479 NC_009617.1 2872581 2873186 D PFAM: regulatory protein, TetR; KEGG: mst:Msp_0717 predicted transcriptional regulator; TetR family transcriptional regulator 2872581..2873186 Clostridium beijerinckii NCIMB 8052 5293681 YP_001309593.1 CDS Cbei_2480 NC_009617.1 2873253 2873642 R KEGG: cno:NT01CX_1041 hypothetical protein; hypothetical protein complement(2873253..2873642) Clostridium beijerinckii NCIMB 8052 5293682 YP_001309594.1 CDS Cbei_2481 NC_009617.1 2874637 2876097 D PFAM: glycoside hydrolase, family 25; cell wall binding repeat-containing protein; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; glycoside hydrolase 2874637..2876097 Clostridium beijerinckii NCIMB 8052 5293683 YP_001309595.1 CDS Cbei_2482 NC_009617.1 2876512 2877213 D hypothetical protein 2876512..2877213 Clostridium beijerinckii NCIMB 8052 5293684 YP_001309596.1 CDS Cbei_2483 NC_009617.1 2877413 2878666 D KEGG: btl:BALH_1746 hypothetical protein; hypothetical protein 2877413..2878666 Clostridium beijerinckii NCIMB 8052 5293685 YP_001309597.1 CDS Cbei_2484 NC_009617.1 2878678 2879337 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: btk:BT9727_1806 alkaline phosphatase synthesis response regulator; two component transcriptional regulator 2878678..2879337 Clostridium beijerinckii NCIMB 8052 5293686 YP_001309598.1 CDS Cbei_2485 NC_009617.1 2879342 2880733 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: bcz:BCZK1790 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 2879342..2880733 Clostridium beijerinckii NCIMB 8052 5293687 YP_001309599.1 CDS Cbei_2486 NC_009617.1 2881030 2881827 D PFAM: ribonuclease H; KEGG: hdu:HD1206 ribonuclease H; ribonuclease H 2881030..2881827 Clostridium beijerinckii NCIMB 8052 5293688 YP_001309600.1 CDS Cbei_2487 NC_009617.1 2882021 2883832 D PFAM: SEC-C motif domain protein; KEGG: sto:ST1780 hypothetical protein; SecC motif-containing protein 2882021..2883832 Clostridium beijerinckii NCIMB 8052 5293689 YP_001309601.1 CDS Cbei_2488 NC_009617.1 2884085 2884405 D KEGG: eci:UTI89_C4721 hypothetical protein; hypothetical protein 2884085..2884405 Clostridium beijerinckii NCIMB 8052 5293690 YP_001309602.1 CDS Cbei_2489 NC_009617.1 2884426 2885343 D PFAM: protein of unknown function DUF523; KEGG: bld:BLi00192 YbbK; hypothetical protein 2884426..2885343 Clostridium beijerinckii NCIMB 8052 5293691 YP_001309603.1 CDS Cbei_2490 NC_009617.1 2885495 2886037 D PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: cpr:CPR_0682 rubredoxin/rubrerythrin; rubrerythrin 2885495..2886037 Clostridium beijerinckii NCIMB 8052 5293692 YP_001309604.1 CDS Cbei_2491 NC_009617.1 2886555 2888909 D TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein; KEGG: cno:NT01CX_2348 sensory box/GGDEF family protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 2886555..2888909 Clostridium beijerinckii NCIMB 8052 5293693 YP_001309605.1 CDS Cbei_2492 NC_009617.1 2889051 2889812 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mla:Mlab_0278 hypothetical protein; 4Fe-4S ferredoxin 2889051..2889812 Clostridium beijerinckii NCIMB 8052 5293694 YP_001309606.1 CDS Cbei_2494 NC_009617.1 2890410 2891477 D KEGG: fnu:FN1165 D-galactose-binding protein; D-galactose-binding protein 2890410..2891477 Clostridium beijerinckii NCIMB 8052 5296377 YP_001309607.1 CDS Cbei_2495 NC_009617.1 2891609 2892883 R KEGG: cac:CAC0769 hypothetical protein; hypothetical protein complement(2891609..2892883) Clostridium beijerinckii NCIMB 8052 5293696 YP_001309608.1 CDS Cbei_2496 NC_009617.1 2893180 2893788 D PFAM: CutC family protein; KEGG: cpf:CPF_0254 CutC family protein; CutC family protein 2893180..2893788 Clostridium beijerinckii NCIMB 8052 5293697 YP_001309609.1 CDS Cbei_2497 NC_009617.1 2894085 2897072 D PFAM: sigma-54 factor, interaction domain-containing protein; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PTS system fructose subfamily IIA component; PRD domain protein; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; KEGG: tte:TTE0180 NtrC family transcriptional regulator, ATPase domain; sigma-54 factor interaction domain-containing protein 2894085..2897072 Clostridium beijerinckii NCIMB 8052 5293698 YP_001309610.1 CDS Cbei_2498 NC_009617.1 2897483 2897959 D PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: tte:TTE0181 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 2897483..2897959 Clostridium beijerinckii NCIMB 8052 5293699 YP_001309611.1 CDS Cbei_2499 NC_009617.1 2898011 2898295 D PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: bcl:ABC3346 PTS system, galactitol-specific enzyme II, B component; phosphotransferase system, lactose/cellobiose-specific IIB subunit 2898011..2898295 Clostridium beijerinckii NCIMB 8052 5293700 YP_001309612.1 CDS Cbei_2500 NC_009617.1 2898517 2899791 D PFAM: PTS system Galactitol-specific IIC component; KEGG: lwe:lwe2614 PTS system, galactitol-specific, IIC component; PTS system galactitol-specific transporter subunit IIC 2898517..2899791 Clostridium beijerinckii NCIMB 8052 5293701 YP_001309613.1 CDS Cbei_2501 NC_009617.1 2900014 2901396 D PFAM: 3-dehydroquinate synthase; KEGG: bha:BH1862 L-arabinose utilization protein; glycerol-1-phosphate dehydrogenase 2900014..2901396 Clostridium beijerinckii NCIMB 8052 5293702 YP_001309614.1 CDS Cbei_2502 NC_009617.1 2901586 2902401 D TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: fnu:FN1255 nagD protein; HAD family hydrolase 2901586..2902401 Clostridium beijerinckii NCIMB 8052 5293703 YP_001309615.1 CDS Cbei_2503 NC_009617.1 2902537 2903583 D PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: pac:PPA2315 probable glycerol-3-phosphate dehydrogenase [NAD(P)+]; NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein 2902537..2903583 Clostridium beijerinckii NCIMB 8052 5293704 YP_001309616.1 CDS Cbei_2504 NC_009617.1 2904121 2905563 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cth:Cthe_0511 histidine kinase; histidine kinase 2904121..2905563 Clostridium beijerinckii NCIMB 8052 5293705 YP_001309617.1 CDS Cbei_2505 NC_009617.1 2905955 2907007 D KEGG: cpe:CPE1341 probable galactoside ABC transporter; galactoside ABC transporter 2905955..2907007 Clostridium beijerinckii NCIMB 8052 5293706 YP_001309618.1 CDS Cbei_2506 NC_009617.1 2907302 2907601 D hypothetical protein 2907302..2907601 Clostridium beijerinckii NCIMB 8052 5293707 YP_001309619.1 CDS Cbei_2507 NC_009617.1 2908129 2909586 R KEGG: tte:TTE2242 transposase; transposase complement(2908129..2909586) Clostridium beijerinckii NCIMB 8052 5293708 YP_001309620.1 CDS Cbei_2508 NC_009617.1 2909757 2911229 D PFAM: protein of unknown function UPF0061; KEGG: gka:GK0436 hypothetical protein; hypothetical protein 2909757..2911229 Clostridium beijerinckii NCIMB 8052 5293709 YP_001309621.1 CDS Cbei_2509 NC_009617.1 2911529 2911951 D PFAM: 3D domain protein; KEGG: cno:NT01CX_0685 hypothetical protein; hypothetical protein 2911529..2911951 Clostridium beijerinckii NCIMB 8052 5293710 YP_001309622.1 CDS Cbei_2510 NC_009617.1 2912518 2913183 D TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsy:DSY4690 hypothetical protein; polar amino acid ABC transporter inner membrane subunit 2912518..2913183 Clostridium beijerinckii NCIMB 8052 5293711 YP_001309623.1 CDS Cbei_2511 NC_009617.1 2913164 2913841 D TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsy:DSY4689 hypothetical protein; polar amino acid ABC transporter inner membrane subunit 2913164..2913841 Clostridium beijerinckii NCIMB 8052 5293712 YP_001309624.1 CDS Cbei_2512 NC_009617.1 2913853 2914602 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY4688 hypothetical protein; ABC transporter 2913853..2914602 Clostridium beijerinckii NCIMB 8052 5293713 YP_001309625.1 CDS Cbei_2513 NC_009617.1 2914626 2915498 D PFAM: extracellular solute-binding protein, family 3; KEGG: dsy:DSY4687 hypothetical protein; extracellular solute-binding protein 2914626..2915498 Clostridium beijerinckii NCIMB 8052 5293714 YP_001309626.1 CDS Cbei_2514 NC_009617.1 2915943 2917013 D PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: dsy:DSY1899 hypothetical protein; metal dependent phosphohydrolase 2915943..2917013 Clostridium beijerinckii NCIMB 8052 5293715 YP_001309627.1 CDS Cbei_2515 NC_009617.1 2917029 2919884 D KEGG: swo:Swol_0601 signal transduction histidine kinase-like protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; GAF domain protein; multi-sensor hybrid histidine kinase 2917029..2919884 Clostridium beijerinckii NCIMB 8052 5293716 YP_001309628.1 CDS Cbei_2516 NC_009617.1 2919936 2920298 D PFAM: response regulator receiver; KEGG: ctc:CTC01729 chemotaxis protein cheY; response regulator receiver protein 2919936..2920298 Clostridium beijerinckii NCIMB 8052 5293717 YP_001309629.1 CDS Cbei_2517 NC_009617.1 2920730 2921092 D KEGG: mba:Mbar_A0144 conserved membrane protein, predicted permease; permease 2920730..2921092 Clostridium beijerinckii NCIMB 8052 5293718 YP_001309630.1 CDS Cbei_2518 NC_009617.1 2921498 2922130 R KEGG: rru:Rru_A0914 aldehyde dehydrogenase; aldehyde dehydrogenase complement(2921498..2922130) Clostridium beijerinckii NCIMB 8052 5293719 YP_001309631.1 CDS Cbei_2519 NC_009617.1 2922575 2922979 D KEGG: cpe:CPE1360 hypothetical protein; hypothetical protein 2922575..2922979 Clostridium beijerinckii NCIMB 8052 5293720 YP_001309632.1 CDS Cbei_2520 NC_009617.1 2923101 2924468 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cac:CAC3354 probable cation efflux pump (multidrug resistance protein); MATE efflux family protein complement(2923101..2924468) Clostridium beijerinckii NCIMB 8052 5293721 YP_001309633.1 CDS Cbei_2521 NC_009617.1 2924566 2926098 R PFAM: helix-turn-helix, Fis-type; Propionate catabolism activator domain protein; KEGG: oih:OB1010 sigma-L-dependent transcriptional regulator; Fis family transcriptional regulator complement(2924566..2926098) Clostridium beijerinckii NCIMB 8052 5293722 YP_001309634.1 CDS Cbei_2522 NC_009617.1 2926432 2928525 R TIGRFAM: ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent; KEGG: pcu:pc0111 ribonucleoside triphosphate reductase; ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent complement(2926432..2928525) Clostridium beijerinckii NCIMB 8052 5293723 YP_001309635.1 CDS Cbei_2523 NC_009617.1 2929041 2929889 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: mmp:MMP0078 hypothetical protein; nitrite and sulfite reductase 4Fe-4S subunit 2929041..2929889 Clostridium beijerinckii NCIMB 8052 5293724 YP_001309636.1 CDS Cbei_2524 NC_009617.1 2930022 2930834 D TIGRFAM: Cof-like hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: cpr:CPR_0492 HAD hydrolase, IIB family; cof family hydrolase 2930022..2930834 Clostridium beijerinckii NCIMB 8052 5293725 YP_001309637.1 CDS Cbei_2525 NC_009617.1 2931164 2931739 D PFAM: 3D domain protein; KEGG: bcl:ABC1928 peptidoglycan-binding domain-containing protein; hypothetical protein 2931164..2931739 Clostridium beijerinckii NCIMB 8052 5293726 YP_001309638.1 CDS Cbei_2526 NC_009617.1 2932194 2932454 D KEGG: bha:BH1562 hypothetical protein; hypothetical protein 2932194..2932454 Clostridium beijerinckii NCIMB 8052 5293727 YP_001309639.1 CDS Cbei_2527 NC_009617.1 2932772 2935237 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; domain of unknown function DUF1745; KEGG: tdn:Tmden_0380 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains); diguanylate cyclase/phosphodiesterase 2932772..2935237 Clostridium beijerinckii NCIMB 8052 5293728 YP_001309640.1 CDS Cbei_2528 NC_009617.1 2935335 2935937 R KEGG: dsy:DSY1535 hypothetical protein; hypothetical protein complement(2935335..2935937) Clostridium beijerinckii NCIMB 8052 5293729 YP_001309641.1 CDS Cbei_2529 NC_009617.1 2936106 2936708 R PFAM: protein of unknown function UPF0126; KEGG: lla:L169795 hypothetical protein; hypothetical protein complement(2936106..2936708) Clostridium beijerinckii NCIMB 8052 5293730 YP_001309642.1 CDS Cbei_2530 NC_009617.1 2936995 2938731 R TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA, central domain protein; SMART: ATPase AAA; KEGG: ctc:CTC00531 ATP-dependent zinc metallopeptidase; ATP-dependent metalloprotease FtsH complement(2936995..2938731) Clostridium beijerinckii NCIMB 8052 5293731 YP_001309643.1 CDS Cbei_2531 NC_009617.1 2938876 2939283 R PFAM: GtrA family protein; KEGG: sep:SE1997 hypothetical protein; GtrA family protein complement(2938876..2939283) Clostridium beijerinckii NCIMB 8052 5293732 YP_001309644.1 CDS Cbei_2532 NC_009617.1 2940092 2941006 D PFAM: peptidase U61, LD-carboxypeptidase A; KEGG: bld:BLi01397 YkfA; peptidase U61, LD-carboxypeptidase A 2940092..2941006 Clostridium beijerinckii NCIMB 8052 5293733 YP_001309645.1 CDS Cbei_2533 NC_009617.1 2941041 2941859 D PFAM: NLP/P60 protein; KEGG: lbu:LBUL_1667 cell wall-associated hydrolase; NLP/P60 protein 2941041..2941859 Clostridium beijerinckii NCIMB 8052 5293734 YP_001309646.1 CDS Cbei_2534 NC_009617.1 2942348 2942572 D PFAM: FeoA family protein; KEGG: cno:NT01CX_1592 ferrous iron transport protein A; FeoA family protein 2942348..2942572 Clostridium beijerinckii NCIMB 8052 5293735 YP_001309647.1 CDS Cbei_2535 NC_009617.1 2942626 2944434 D TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: cpr:CPR_1631 ferrous iron transport protein B; ferrous iron transport protein B 2942626..2944434 Clostridium beijerinckii NCIMB 8052 5293736 YP_001309648.1 CDS Cbei_2536 NC_009617.1 2944852 2945373 D PFAM: membrane-bound metal-dependent hydrolase; KEGG: lsl:LSL_1368 hypothetical membrane spanning protein; membrane-bound metal-dependent hydrolase 2944852..2945373 Clostridium beijerinckii NCIMB 8052 5293737 YP_001309649.1 CDS Cbei_2537 NC_009617.1 2945677 2946636 R KEGG: gka:GK2460 hypothetical protein; hypothetical protein complement(2945677..2946636) Clostridium beijerinckii NCIMB 8052 5293738 YP_001309650.1 CDS Cbei_2538 NC_009617.1 2946991 2947419 D KEGG: cno:NT01CX_2384 6-pyruvoyl tetrahydrobiopterin synthase; 6-pyruvoyl tetrahydrobiopterin synthase 2946991..2947419 Clostridium beijerinckii NCIMB 8052 5293739 YP_001309651.1 CDS Cbei_2539 NC_009617.1 2947432 2948100 D PFAM: Radical SAM domain protein; KEGG: cno:NT01CX_2385 Fe-S oxidoreductase of MoaA family CAC3625; radical SAM domain-containing protein 2947432..2948100 Clostridium beijerinckii NCIMB 8052 5293740 YP_001309652.1 CDS folE NC_009617.1 2948190 2948783 D involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 2948190..2948783 Clostridium beijerinckii NCIMB 8052 5293741 YP_001309653.1 CDS Cbei_2541 NC_009617.1 2948855 2949508 D TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: btl:BALH_1202 possible aluminum resistance protein; exsB protein 2948855..2949508 Clostridium beijerinckii NCIMB 8052 5293742 YP_001309654.1 CDS Cbei_2542 NC_009617.1 2949546 2950049 D NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 2949546..2950049 Clostridium beijerinckii NCIMB 8052 5293743 YP_001309655.1 CDS Cbei_2543 NC_009617.1 2950135 2951352 D PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cpr:CPR_1150 probable flavoprotein, YhiN family; hypothetical protein 2950135..2951352 Clostridium beijerinckii NCIMB 8052 5293744 YP_001309656.1 CDS cmk NC_009617.1 2951445 2952098 D Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 2951445..2952098 Clostridium beijerinckii NCIMB 8052 5293745 YP_001309657.1 CDS Cbei_2545 NC_009617.1 2952112 2954019 D these proteins appear to have resulted from a fusion of lytB and rpsA; catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2952112..2954019 Clostridium beijerinckii NCIMB 8052 5293746 YP_001309658.1 CDS Cbei_2546 NC_009617.1 2954246 2954854 D PFAM: NUDIX hydrolase; KEGG: cac:CAC3601 NUDIX (MutT) family hydrolase; NUDIX hydrolase 2954246..2954854 Clostridium beijerinckii NCIMB 8052 5293747 YP_001309659.1 CDS Cbei_2547 NC_009617.1 2955012 2956304 R PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: cpf:CPF_2907 xanthine/uracil permease family protein; xanthine/uracil/vitamin C permease complement(2955012..2956304) Clostridium beijerinckii NCIMB 8052 5293748 YP_001309660.1 CDS Cbei_2548 NC_009617.1 2956605 2957924 D PFAM: protein of unknown function DUF815; KEGG: cth:Cthe_0284 protein of unknown function DUF815; hypothetical protein 2956605..2957924 Clostridium beijerinckii NCIMB 8052 5293749 YP_001309661.1 CDS Cbei_2549 NC_009617.1 2958037 2958552 R PFAM: Ferritin, Dps family protein; KEGG: cpf:CPF_1236 ferritin family protein; Ferritin, Dps family protein complement(2958037..2958552) Clostridium beijerinckii NCIMB 8052 5293750 YP_001309662.1 CDS Cbei_2550 NC_009617.1 2959184 2959822 D PFAM: pentapeptide repeat protein; KEGG: cac:CAC0783 uncharacterized low-complexity protein; pentapeptide repeat-containing protein 2959184..2959822 Clostridium beijerinckii NCIMB 8052 5293751 YP_001309663.1 CDS Cbei_2551 NC_009617.1 2960016 2960507 D hypothetical protein 2960016..2960507 Clostridium beijerinckii NCIMB 8052 5293752 YP_001309664.1 CDS Cbei_2552 NC_009617.1 2960578 2960799 D KEGG: cac:CAC2790 hypothetical protein; hypothetical protein 2960578..2960799 Clostridium beijerinckii NCIMB 8052 5293753 YP_001309665.1 CDS Cbei_2553 NC_009617.1 2960848 2961018 D hypothetical protein 2960848..2961018 Clostridium beijerinckii NCIMB 8052 5293754 YP_001309666.1 CDS Cbei_2554 NC_009617.1 2961310 2962179 D PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC1840 predicted acetyltransferase domain containing protein; N-acetyltransferase GCN5 2961310..2962179 Clostridium beijerinckii NCIMB 8052 5293755 YP_001309667.1 CDS Cbei_2555 NC_009617.1 2962300 2963667 D catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 2962300..2963667 Clostridium beijerinckii NCIMB 8052 5293756 YP_001309668.1 CDS Cbei_2556 NC_009617.1 2964391 2964876 R TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: cpr:CPR_1356 YbaK/EbsC protein; ybaK/ebsC protein complement(2964391..2964876) Clostridium beijerinckii NCIMB 8052 5293757 YP_001309669.1 CDS xerC NC_009617.1 2965678 2966667 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 2965678..2966667 Clostridium beijerinckii NCIMB 8052 5293758 YP_001309670.1 CDS Cbei_2558 NC_009617.1 2966797 2967516 R KEGG: rno:679128 hypothetical protein LOC679128; hypothetical protein complement(2966797..2967516) Clostridium beijerinckii NCIMB 8052 5293759 YP_001309671.1 CDS Cbei_2559 NC_009617.1 2967613 2968047 R KEGG: cpr:CPR_1178 hypothetical protein; hypothetical protein complement(2967613..2968047) Clostridium beijerinckii NCIMB 8052 5293760 YP_001309672.1 CDS Cbei_2560 NC_009617.1 2968195 2968698 R KEGG: cac:CAC2110 GAF domain-containing protein; GAF domain-containing protein complement(2968195..2968698) Clostridium beijerinckii NCIMB 8052 5293761 YP_001309673.1 CDS Cbei_2561 NC_009617.1 2968945 2969550 D Represses a number of genes involved in the response to DNA damage; LexA repressor 2968945..2969550 Clostridium beijerinckii NCIMB 8052 5293762 YP_001309674.1 CDS Cbei_2562 NC_009617.1 2969698 2970990 R PFAM: Aluminium resistance family protein; KEGG: cac:CAC1833 cystathionine beta-lyase family protein, YNBB B.subtilis ortholog; aluminium resistance family protein complement(2969698..2970990) Clostridium beijerinckii NCIMB 8052 5293763 YP_001309675.1 CDS Cbei_2563 NC_009617.1 2971055 2971300 R TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein, core; KEGG: cac:CAC1834 host factor I protein Hfq; RNA chaperone Hfq complement(2971055..2971300) Clostridium beijerinckii NCIMB 8052 5293764 YP_001309676.1 CDS miaA NC_009617.1 2971345 2972274 R IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase complement(2971345..2972274) Clostridium beijerinckii NCIMB 8052 5293765 YP_001309677.1 CDS mutL NC_009617.1 2972335 2974329 R This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein complement(2972335..2974329) Clostridium beijerinckii NCIMB 8052 5293766 YP_001309678.1 CDS Cbei_2566 NC_009617.1 2974916 2976079 R KEGG: cpr:CPR_1122 hypothetical protein; hypothetical protein complement(2974916..2976079) Clostridium beijerinckii NCIMB 8052 5293767 YP_001309679.1 CDS aat NC_009617.1 2976240 2976893 R leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase complement(2976240..2976893) Clostridium beijerinckii NCIMB 8052 5293768 YP_001309680.1 CDS Cbei_2568 NC_009617.1 2977227 2978006 R PFAM: pentapeptide repeat protein; KEGG: cac:CAC0073 uncharacterized protein, ortholog of YYBG B.subtilis; pentapeptide repeat-containing protein complement(2977227..2978006) Clostridium beijerinckii NCIMB 8052 5293769 YP_001309681.1 CDS Cbei_2569 NC_009617.1 2978246 2981032 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(2978246..2981032) Clostridium beijerinckii NCIMB 8052 5293770 YP_001309682.1 CDS Cbei_2570 NC_009617.1 2981217 2982218 R KEGG: sak:SAK_1912 hypothetical protein; hypothetical protein complement(2981217..2982218) Clostridium beijerinckii NCIMB 8052 5293771 YP_001309683.1 CDS Cbei_2571 NC_009617.1 2982540 2983322 R hypothetical protein complement(2982540..2983322) Clostridium beijerinckii NCIMB 8052 5293772 YP_001309684.1 CDS Cbei_2572 NC_009617.1 2983679 2985139 R PFAM: aldehyde dehydrogenase; KEGG: cpf:CPF_2748 glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent; aldehyde dehydrogenase complement(2983679..2985139) Clostridium beijerinckii NCIMB 8052 5293773 YP_001309685.1 CDS Cbei_2573 NC_009617.1 2985408 2986187 R PFAM: conserved hypothetical protein 245; KEGG: baa:BA_0048 ABC transport system permease; hypothetical protein complement(2985408..2986187) Clostridium beijerinckii NCIMB 8052 5293774 YP_001309686.1 CDS Cbei_2574 NC_009617.1 2986180 2986815 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bca:BCE_5078 ABC transporter ATP-binding protein; ABC transporter complement(2986180..2986815) Clostridium beijerinckii NCIMB 8052 5293775 YP_001309687.1 CDS Cbei_2575 NC_009617.1 2987013 2988551 R TIGRFAM: LexA repressor; PFAM: peptidase S24, S26A and S26B; KEGG: cac:CAC1793 P-loop ATPase domain fused to LexA-like protein; prophage repressor complement(2987013..2988551) Clostridium beijerinckii NCIMB 8052 5293776 YP_001309688.1 CDS Cbei_2576 NC_009617.1 2988805 2989593 D TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: cac:CAC2244 HAD superfamily hydrolases, YkrA B.subtilis ortholog; cof family hydrolase 2988805..2989593 Clostridium beijerinckii NCIMB 8052 5293777 YP_001309689.1 CDS Cbei_2577 NC_009617.1 2989795 2990937 D KEGG: pfa:PF14_0302 hypothetical protein; hypothetical protein 2989795..2990937 Clostridium beijerinckii NCIMB 8052 5293778 YP_001309690.1 CDS Cbei_2578 NC_009617.1 2991141 2992190 R TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: cpf:CPF_0482 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase complement(2991141..2992190) Clostridium beijerinckii NCIMB 8052 5293779 YP_001309691.1 CDS Cbei_2579 NC_009617.1 2992209 2993090 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: cpf:CPF_0599 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase complement(2992209..2993090) Clostridium beijerinckii NCIMB 8052 5293780 YP_001309692.1 CDS Cbei_2580 NC_009617.1 2993420 2994919 R KEGG: mma:MM0214 hypothetical protein; hypothetical protein complement(2993420..2994919) Clostridium beijerinckii NCIMB 8052 5293781 YP_001309693.1 CDS Cbei_2581 NC_009617.1 2995019 2995288 R KEGG: cac:CAC2352 hypothetical protein; hypothetical protein complement(2995019..2995288) Clostridium beijerinckii NCIMB 8052 5293782 YP_001309694.1 CDS Cbei_2582 NC_009617.1 2995375 2996898 R KEGG: tte:TTE1676 hypothetical protein; hypothetical protein complement(2995375..2996898) Clostridium beijerinckii NCIMB 8052 5293783 YP_001309695.1 CDS Cbei_2583 NC_009617.1 2997071 2997835 D KEGG: cth:Cthe_1088 hypothetical protein; hypothetical protein 2997071..2997835 Clostridium beijerinckii NCIMB 8052 5293784 YP_001309696.1 CDS Cbei_2584 NC_009617.1 2998103 2998603 D hypothetical protein 2998103..2998603 Clostridium beijerinckii NCIMB 8052 5293785 YP_001309697.1 CDS Cbei_2585 NC_009617.1 2998788 2999846 D PFAM: glycosyl transferase, group 1; KEGG: cno:NT01CX_1800 glycosyltransferase; group 1 glycosyl transferase 2998788..2999846 Clostridium beijerinckii NCIMB 8052 5293786 YP_001309698.1 CDS Cbei_2586 NC_009617.1 2999997 3001409 D PFAM: glycosyl transferase, family 2; Methyltransferase type 11; KEGG: cac:CAC2347 glycosyltransferase; glycosyl transferase family protein 2999997..3001409 Clostridium beijerinckii NCIMB 8052 5293787 YP_001309699.1 CDS Cbei_2587 NC_009617.1 3002097 3004841 D PFAM: Collagen triple helix repeat; KEGG: bcl:ABC0473 hypothetical protein; triple helix repeat-containing collagen 3002097..3004841 Clostridium beijerinckii NCIMB 8052 5293788 YP_001309700.1 CDS Cbei_2588 NC_009617.1 3005110 3012345 D PFAM: Collagen triple helix repeat; KEGG: mlo:mlr0587 hypothetical glycine-rich protein; triple helix repeat-containing collagen 3005110..3012345 Clostridium beijerinckii NCIMB 8052 5293789 YP_001309701.1 CDS Cbei_2589 NC_009617.1 3012590 3013663 D PFAM: glycosyl transferase, family 2; TPR repeat-containing protein; KEGG: dsy:DSY4437 hypothetical protein; glycosyl transferase family protein 3012590..3013663 Clostridium beijerinckii NCIMB 8052 5293790 YP_001309702.1 CDS Cbei_2590 NC_009617.1 3013887 3015026 D KEGG: chu:CHU_0854 capsular polysaccharide biosynthesis protein; capsular polysaccharide biosynthesis protein-like protein 3013887..3015026 Clostridium beijerinckii NCIMB 8052 5293791 YP_001309703.1 CDS Cbei_2591 NC_009617.1 3015102 3016727 D PFAM: glycosyl transferase, family 2; KEGG: chy:CHY_0980 glycosyl transferase, group 2 family; glycosyl transferase family protein 3015102..3016727 Clostridium beijerinckii NCIMB 8052 5293792 YP_001309704.1 CDS Cbei_2592 NC_009617.1 3016922 3017857 R KEGG: sit:TM1040_3425 hypothetical protein; hypothetical protein complement(3016922..3017857) Clostridium beijerinckii NCIMB 8052 5293793 YP_001309705.1 CDS Cbei_2593 NC_009617.1 3017865 3018776 R KEGG: azo:azo2678 conserved hypothetical protein; hypothetical protein complement(3017865..3018776) Clostridium beijerinckii NCIMB 8052 5293794 YP_001309706.1 CDS Cbei_2594 NC_009617.1 3018781 3019458 R KEGG: xom:XOO_2848 hypothetical protein; hypothetical protein complement(3018781..3019458) Clostridium beijerinckii NCIMB 8052 5293795 YP_001309707.1 CDS Cbei_2595 NC_009617.1 3019476 3020231 R hypothetical protein complement(3019476..3020231) Clostridium beijerinckii NCIMB 8052 5293796 YP_001309708.1 CDS Cbei_2596 NC_009617.1 3020554 3020961 D PFAM: WxcM domain protein, C-terminal domain protein; KEGG: dsy:DSY3318 hypothetical protein; WxcM domain-containing protein 3020554..3020961 Clostridium beijerinckii NCIMB 8052 5293797 YP_001309709.1 CDS Cbei_2597 NC_009617.1 3020973 3022067 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gme:Gmet_1325 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 3020973..3022067 Clostridium beijerinckii NCIMB 8052 5293798 YP_001309710.1 CDS Cbei_2598 NC_009617.1 3022163 3023899 R PFAM: amine oxidase; KEGG: ter:Tery_1366 amine oxidase; amine oxidase complement(3022163..3023899) Clostridium beijerinckii NCIMB 8052 5293799 YP_001309711.1 CDS Cbei_2599 NC_009617.1 3023966 3025105 R TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase, class V; KEGG: cac:CAC2354 NifS family aminotransferase; cysteine desulfurase complement(3023966..3025105) Clostridium beijerinckii NCIMB 8052 5293800 YP_001309712.1 CDS Cbei_2600 NC_009617.1 3025500 3026273 R KEGG: cth:Cthe_1088 hypothetical protein; hypothetical protein complement(3025500..3026273) Clostridium beijerinckii NCIMB 8052 5293801 YP_001309713.1 CDS Cbei_2601 NC_009617.1 3026693 3027268 R TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; KEGG: cpf:CPF_0598 dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase complement(3026693..3027268) Clostridium beijerinckii NCIMB 8052 5293802 YP_001309714.1 CDS Cbei_2602 NC_009617.1 3027271 3028185 R TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: cpf:CPF_0597 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase complement(3027271..3028185) Clostridium beijerinckii NCIMB 8052 5293803 YP_001309715.1 CDS Cbei_2603 NC_009617.1 3028374 3030161 D PFAM: Collagen triple helix repeat; KEGG: btl:BALH_1312 collagen-like protein; triple helix repeat-containing collagen 3028374..3030161 Clostridium beijerinckii NCIMB 8052 5293804 YP_001309716.1 CDS Cbei_2604 NC_009617.1 3030296 3031828 R PFAM: glycosyl transferase, family 2; KEGG: mst:Msp_0493 predicted glycosyltransferase; glycosyl transferase family protein complement(3030296..3031828) Clostridium beijerinckii NCIMB 8052 5293805 YP_001309717.1 CDS Cbei_2605 NC_009617.1 3032297 3032737 R hypothetical protein complement(3032297..3032737) Clostridium beijerinckii NCIMB 8052 5293806 YP_001309718.1 CDS Cbei_2606 NC_009617.1 3032925 3033446 R hypothetical protein complement(3032925..3033446) Clostridium beijerinckii NCIMB 8052 5293807 YP_001309719.1 CDS Cbei_2607 NC_009617.1 3033859 3034188 D hypothetical protein 3033859..3034188 Clostridium beijerinckii NCIMB 8052 5293808 YP_001309720.1 CDS Cbei_2608 NC_009617.1 3034244 3034618 R Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase complement(3034244..3034618) Clostridium beijerinckii NCIMB 8052 5293809 YP_001309721.1 CDS panC NC_009617.1 3034987 3035829 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(3034987..3035829) Clostridium beijerinckii NCIMB 8052 5293810 YP_001309722.1 CDS panB NC_009617.1 3036229 3037056 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(3036229..3037056) Clostridium beijerinckii NCIMB 8052 5293811 YP_001309723.1 CDS Cbei_2611 NC_009617.1 3037056 3038045 R KEGG: cno:NT01CX_1070 hypothetical protein; hypothetical protein complement(3037056..3038045) Clostridium beijerinckii NCIMB 8052 5293812 YP_001309724.1 CDS Cbei_2614 NC_009617.1 3039905 3040264 R hypothetical protein complement(3039905..3040264) Clostridium beijerinckii NCIMB 8052 5296379 YP_001309725.1 CDS Cbei_2615 NC_009617.1 3040338 3040586 R hypothetical protein complement(3040338..3040586) Clostridium beijerinckii NCIMB 8052 5293814 YP_001309726.1 CDS Cbei_2616 NC_009617.1 3040831 3041193 R hypothetical protein complement(3040831..3041193) Clostridium beijerinckii NCIMB 8052 5293815 YP_001309727.1 CDS Cbei_2617 NC_009617.1 3041357 3041929 D TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: ctc:pE88_11 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 factor 3041357..3041929 Clostridium beijerinckii NCIMB 8052 5293816 YP_001309728.1 CDS Cbei_2618 NC_009617.1 3042003 3042245 R hypothetical protein complement(3042003..3042245) Clostridium beijerinckii NCIMB 8052 5293817 YP_001309729.1 CDS Cbei_2619 NC_009617.1 3042533 3043063 D hypothetical protein 3042533..3043063 Clostridium beijerinckii NCIMB 8052 5293818 YP_001309730.1 CDS Cbei_2620 NC_009617.1 3043164 3043364 D hypothetical protein 3043164..3043364 Clostridium beijerinckii NCIMB 8052 5293819 YP_001309731.1 CDS Cbei_2621 NC_009617.1 3043721 3044281 R hypothetical protein complement(3043721..3044281) Clostridium beijerinckii NCIMB 8052 5293820 YP_001309732.1 CDS Cbei_2622 NC_009617.1 3044691 3045386 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cac:CAC2574 predicted S-adenosylmethionine-dependent methyltransferase; type 11 methyltransferase complement(3044691..3045386) Clostridium beijerinckii NCIMB 8052 5293821 YP_001309733.1 CDS Cbei_2623 NC_009617.1 3045927 3046460 R KEGG: cth:Cthe_1520 hypothetical protein; hypothetical protein complement(3045927..3046460) Clostridium beijerinckii NCIMB 8052 5293822 YP_001309734.1 CDS Cbei_2624 NC_009617.1 3047960 3048478 R KEGG: bth:BT_4528 hypothetical protein; hypothetical protein complement(3047960..3048478) Clostridium beijerinckii NCIMB 8052 5293823 YP_001309735.1 CDS Cbei_2625 NC_009617.1 3048591 3049172 R hypothetical protein complement(3048591..3049172) Clostridium beijerinckii NCIMB 8052 5293824 YP_001309736.1 CDS Cbei_2626 NC_009617.1 3049243 3049947 R PFAM: Endonuclease V; KEGG: btk:BT9727_3063 deoxyinosine 3'endonuclease (endonuclease V); deoxyribonuclease V complement(3049243..3049947) Clostridium beijerinckii NCIMB 8052 5293825 YP_001309737.1 CDS Cbei_2627 NC_009617.1 3049994 3050446 R KEGG: btk:BT9727_3064 hypothetical protein; hypothetical protein complement(3049994..3050446) Clostridium beijerinckii NCIMB 8052 5293826 YP_001309738.1 CDS Cbei_2628 NC_009617.1 3050684 3051511 R KEGG: mxa:MXAN_4193 hypothetical protein; hypothetical protein complement(3050684..3051511) Clostridium beijerinckii NCIMB 8052 5293827 YP_001309739.1 CDS Cbei_2629 NC_009617.1 3051627 3051920 R hypothetical protein complement(3051627..3051920) Clostridium beijerinckii NCIMB 8052 5293828 YP_001309740.1 CDS Cbei_2630 NC_009617.1 3052307 3052483 R hypothetical protein complement(3052307..3052483) Clostridium beijerinckii NCIMB 8052 5293829 YP_001309741.1 CDS Cbei_2631 NC_009617.1 3052807 3053301 R KEGG: cac:CAC3701 hypothetical protein, CF-44 family; hypothetical protein complement(3052807..3053301) Clostridium beijerinckii NCIMB 8052 5293830 YP_001309742.1 CDS Cbei_2632 NC_009617.1 3053588 3053962 R hypothetical protein complement(3053588..3053962) Clostridium beijerinckii NCIMB 8052 5293831 YP_001309743.1 CDS Cbei_2633 NC_009617.1 3053982 3054656 R KEGG: bat:BAS2050 hypothetical protein; hypothetical protein complement(3053982..3054656) Clostridium beijerinckii NCIMB 8052 5293832 YP_001309744.1 CDS Cbei_2634 NC_009617.1 3054950 3055564 R KEGG: cac:CAC2030 hypothetical protein; hypothetical protein complement(3054950..3055564) Clostridium beijerinckii NCIMB 8052 5293833 YP_001309745.1 CDS Cbei_2635 NC_009617.1 3055561 3058167 R KEGG: lin:lin0059 hypothetical protein; hypothetical protein complement(3055561..3058167) Clostridium beijerinckii NCIMB 8052 5293834 YP_001309746.1 CDS Cbei_2636 NC_009617.1 3058232 3058612 R hypothetical protein complement(3058232..3058612) Clostridium beijerinckii NCIMB 8052 5293835 YP_001309747.1 CDS Cbei_2637 NC_009617.1 3058624 3059139 R hypothetical protein complement(3058624..3059139) Clostridium beijerinckii NCIMB 8052 5293836 YP_001309748.1 CDS Cbei_2638 NC_009617.1 3059153 3060313 R PFAM: pentapeptide repeat protein; KEGG: btk:BT9727_0977 conserved hypothetical protein, possible quinolone resistance protein; pentapeptide repeat-containing protein complement(3059153..3060313) Clostridium beijerinckii NCIMB 8052 5293837 YP_001309749.1 CDS Cbei_2639 NC_009617.1 3060317 3061744 R hypothetical protein complement(3060317..3061744) Clostridium beijerinckii NCIMB 8052 5293838 YP_001309750.1 CDS Cbei_2640 NC_009617.1 3061744 3062346 R hypothetical protein complement(3061744..3062346) Clostridium beijerinckii NCIMB 8052 5293839 YP_001309751.1 CDS Cbei_2641 NC_009617.1 3062965 3063942 D PFAM: phage integrase family protein; KEGG: chy:CHY_1702 prophage LambdaCh01, site-specific recombinase, phage integrase family; phage integrase family protein 3062965..3063942 Clostridium beijerinckii NCIMB 8052 5293840 YP_001309752.1 CDS Cbei_2642 NC_009617.1 3064156 3064863 R PFAM: MgtC/SapB transporter; KEGG: cth:Cthe_1919 MgtC/SapB transporter; MgtC/SapB transporter complement(3064156..3064863) Clostridium beijerinckii NCIMB 8052 5293841 YP_001309753.1 CDS Cbei_2643 NC_009617.1 3064897 3068154 R PFAM: SNF2-related protein; helicase domain protein; type III restriction protein, res subunit; zinc finger, SWIM domain protein; SNF2 helicase associated domain protein; SMART: DEAD-like helicases-like; KEGG: cpe:CPE1625 SWI/SNF family helicase; non-specific serine/threonine protein kinase complement(3064897..3068154) Clostridium beijerinckii NCIMB 8052 5293842 YP_001309754.1 CDS Cbei_2644 NC_009617.1 3068151 3068360 R KEGG: cno:NT01CX_0981 hypothetical protein; hypothetical protein complement(3068151..3068360) Clostridium beijerinckii NCIMB 8052 5293843 YP_001309755.1 CDS Cbei_2645 NC_009617.1 3068429 3070369 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_2868 ABC transporter ATP-binding protein; ABC transporter complement(3068429..3070369) Clostridium beijerinckii NCIMB 8052 5293844 YP_001309756.1 CDS Cbei_2646 NC_009617.1 3071264 3072946 D TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein, central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: azo:azo1034 acetolactate synthase; acetolactate synthase large subunit 3071264..3072946 Clostridium beijerinckii NCIMB 8052 5293845 YP_001309757.1 CDS Cbei_2647 NC_009617.1 3072939 3073244 D TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: dar:Daro_1619 amino acid-binding ACT; acetolactate synthase small subunit 3072939..3073244 Clostridium beijerinckii NCIMB 8052 5293846 YP_001309758.1 CDS Cbei_2648 NC_009617.1 3074000 3074149 R hypothetical protein complement(3074000..3074149) Clostridium beijerinckii NCIMB 8052 5293847 YP_001309759.1 CDS Cbei_2649 NC_009617.1 3074675 3075391 R PFAM: Ferric reductase domain protein transmembrane component, N-terminal domain; KEGG: cac:CAC0200 uncharacterized membrane protein; ferric reductase domain-containing protein complement(3074675..3075391) Clostridium beijerinckii NCIMB 8052 5293848 YP_001309760.1 CDS Cbei_2651 NC_009617.1 3075915 3076613 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC1535 ABC transporter ATPase component; ABC transporter 3075915..3076613 Clostridium beijerinckii NCIMB 8052 5296380 YP_001309761.1 CDS Cbei_2652 NC_009617.1 3076613 3078856 D PFAM: protein of unknown function DUF214; KEGG: cac:CAC1534 predicted permease; hypothetical protein 3076613..3078856 Clostridium beijerinckii NCIMB 8052 5293850 YP_001309762.1 CDS Cbei_2653 NC_009617.1 3079027 3079680 R TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; KEGG: cno:NT01CX_0277 butyrate-acetoacetate CoA-transferase subunit B; 3-oxoacid CoA-transferase subunit B complement(3079027..3079680) Clostridium beijerinckii NCIMB 8052 5293851 YP_001309763.1 CDS Cbei_2654 NC_009617.1 3079692 3080408 R TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; KEGG: cno:NT01CX_0278 acetate CoA-transferase alpha subunit; 3-oxoacid CoA-transferase subunit A complement(3079692..3080408) Clostridium beijerinckii NCIMB 8052 5293852 YP_001309764.1 CDS Cbei_2655 NC_009617.1 3080995 3082629 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cbu:CBU_1364 hypothetical protein; hypothetical protein complement(3080995..3082629) Clostridium beijerinckii NCIMB 8052 5293853 YP_001309765.1 CDS Cbei_2656 NC_009617.1 3083340 3084734 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: lwe:lwe0003 MATE efflux family protein; MATE efflux family protein complement(3083340..3084734) Clostridium beijerinckii NCIMB 8052 5293854 YP_001309766.1 CDS Cbei_2657 NC_009617.1 3084990 3085781 D PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; Cupin 2, conserved barrel domain protein; KEGG: lwe:lwe2180 transcriptional regulator, AraC family; AraC family transcriptional regulator 3084990..3085781 Clostridium beijerinckii NCIMB 8052 5293855 YP_001309767.1 CDS Cbei_2658 NC_009617.1 3085784 3086122 R KEGG: ctc:CTC00651 hypothetical protein; hypothetical protein complement(3085784..3086122) Clostridium beijerinckii NCIMB 8052 5293856 YP_001309768.1 CDS Cbei_2659 NC_009617.1 3086428 3087213 R PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: tte:TTE0052 16S rRNA uridine-516 pseudouridylate synthase and related Pseudouridylate synthase; pseudouridine synthase complement(3086428..3087213) Clostridium beijerinckii NCIMB 8052 5293857 YP_001309769.1 CDS Cbei_2660 NC_009617.1 3087452 3088603 R PFAM: protein of unknown function DUF871; KEGG: bce:BC0805 outer surface protein; hypothetical protein complement(3087452..3088603) Clostridium beijerinckii NCIMB 8052 5293858 YP_001309770.1 CDS Cbei_2661 NC_009617.1 3089033 3090439 R KEGG: cth:Cthe_0634 serine/threonine protein kinase; hypothetical protein complement(3089033..3090439) Clostridium beijerinckii NCIMB 8052 5293859 YP_001309771.1 CDS Cbei_2662 NC_009617.1 3090465 3091568 R PFAM: cell wall hydrolase/autolysin; KEGG: cth:Cthe_0185 cell wall hydrolase/autolysin; cell wall hydrolase/autolysin complement(3090465..3091568) Clostridium beijerinckii NCIMB 8052 5293860 YP_001309772.1 CDS Cbei_2663 NC_009617.1 3091678 3091983 R PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: sha:SH0190 hypothetical protein; PTS system lactose/cellobiose-specific transporter subunit IIA complement(3091678..3091983) Clostridium beijerinckii NCIMB 8052 5293861 YP_001309773.1 CDS Cbei_2664 NC_009617.1 3092002 3093312 R PFAM: glycoside hydrolase, family 4; KEGG: tte:TTE0337 Alpha-galactosidases/6-phospho-beta- glucosidases, family 4 of glycosyl hydrolases; glycoside hydrolase complement(3092002..3093312) Clostridium beijerinckii NCIMB 8052 5293862 YP_001309774.1 CDS Cbei_2665 NC_009617.1 3093393 3094643 R TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system, EIIC; KEGG: sha:SH0189 hypothetical protein; PTS system lactose/cellobiose family transporter subunit IIC complement(3093393..3094643) Clostridium beijerinckii NCIMB 8052 5293863 YP_001309775.1 CDS Cbei_2666 NC_009617.1 3094672 3094980 R PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: sha:SH0188 hypothetical protein; phosphotransferase system, lactose/cellobiose-specific IIB subunit complement(3094672..3094980) Clostridium beijerinckii NCIMB 8052 5293864 YP_001309776.1 CDS Cbei_2667 NC_009617.1 3095296 3096342 D PFAM: fatty acid desaturase; KEGG: bca:BCE_0466 fatty acid desaturase; fatty acid desaturase 3095296..3096342 Clostridium beijerinckii NCIMB 8052 5293865 YP_001309777.1 CDS Cbei_2668 NC_009617.1 3097088 3097813 R KEGG: cac:CAC2041 ABC transported MDR-type, permease component; hypothetical protein complement(3097088..3097813) Clostridium beijerinckii NCIMB 8052 5293866 YP_001309778.1 CDS Cbei_2669 NC_009617.1 3097810 3098793 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcz:BCZK0256 bacitracin ABC transporter ATP-binding protein; ABC transporter complement(3097810..3098793) Clostridium beijerinckii NCIMB 8052 5293867 YP_001309779.1 CDS Cbei_2670 NC_009617.1 3099451 3101706 D KEGG: mlo:mll0592 hypothetical protein; hypothetical protein 3099451..3101706 Clostridium beijerinckii NCIMB 8052 5293868 YP_001309780.1 CDS Cbei_2671 NC_009617.1 3101984 3105157 R PFAM: SNF2-related protein; helicase domain protein; zinc finger, SWIM domain protein; SNF2 helicase associated domain protein; SMART: DEAD-like helicases-like; KEGG: ctc:CTC01850 SWF/SNF family helicase; non-specific serine/threonine protein kinase complement(3101984..3105157) Clostridium beijerinckii NCIMB 8052 5293869 YP_001309781.1 CDS Cbei_2672 NC_009617.1 3105771 3106019 R hypothetical protein complement(3105771..3106019) Clostridium beijerinckii NCIMB 8052 5293870 YP_001309782.1 CDS Cbei_2673 NC_009617.1 3106216 3106848 R hypothetical protein complement(3106216..3106848) Clostridium beijerinckii NCIMB 8052 5293871 YP_001309783.1 CDS Cbei_2674 NC_009617.1 3107102 3107278 R PFAM: ribosomal protein S21; KEGG: cac:CAC1288 30S ribosomal protein S21; 30S ribosomal protein S21 complement(3107102..3107278) Clostridium beijerinckii NCIMB 8052 5293872 YP_001309784.1 CDS Cbei_2675 NC_009617.1 3107704 3109971 R PFAM: coagulation factor 5/8 type domain protein; KEGG: sco:SCO0545 secreted protein; coagulation factor 5/8 type domain-containing protein complement(3107704..3109971) Clostridium beijerinckii NCIMB 8052 5293873 YP_001309785.1 CDS Cbei_2676 NC_009617.1 3110706 3111914 R PFAM: aldo/keto reductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mmp:MMP0208 hypothetical protein; aldo/keto reductase complement(3110706..3111914) Clostridium beijerinckii NCIMB 8052 5293874 YP_001309786.1 CDS Cbei_2677 NC_009617.1 3112212 3112829 D KEGG: cpe:CPE1443 hypothetical protein; hypothetical protein 3112212..3112829 Clostridium beijerinckii NCIMB 8052 5293875 YP_001309787.1 CDS Cbei_2678 NC_009617.1 3112956 3113972 R PFAM: Pirin domain protein; KEGG: cac:CAC1492 uncharacterized protein, YhhW/pirin family; pirin domain-containing protein complement(3112956..3113972) Clostridium beijerinckii NCIMB 8052 5293876 YP_001309788.1 CDS Cbei_2679 NC_009617.1 3114666 3115265 D KEGG: swo:Swol_1911 hypothetical protein; hypothetical protein 3114666..3115265 Clostridium beijerinckii NCIMB 8052 5293877 YP_001309789.1 CDS Cbei_2680 NC_009617.1 3115720 3116205 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cac:CAC3306 thiol peroxidase, TPX; redoxin domain-containing protein complement(3115720..3116205) Clostridium beijerinckii NCIMB 8052 5293878 YP_001309790.1 CDS Cbei_2681 NC_009617.1 3116251 3117159 R TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tte:TTE2220 thioredoxin reductase; thioredoxin reductase complement(3116251..3117159) Clostridium beijerinckii NCIMB 8052 5293879 YP_001309791.1 CDS Cbei_2682 NC_009617.1 3117854 3118411 D hypothetical protein 3117854..3118411 Clostridium beijerinckii NCIMB 8052 5293880 YP_001309792.1 CDS Cbei_2683 NC_009617.1 3118500 3119195 R KEGG: cac:CAC3022 alpha/beta superfamily hydrolase; alpha/beta fold family hydrolase complement(3118500..3119195) Clostridium beijerinckii NCIMB 8052 5293881 YP_001309793.1 CDS Cbei_2684 NC_009617.1 3119174 3119803 R PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: tde:TDE1291 HD domain protein; metal dependent phosphohydrolase complement(3119174..3119803) Clostridium beijerinckii NCIMB 8052 5293882 YP_001309794.1 CDS Cbei_2685 NC_009617.1 3120819 3121418 R PFAM: Abortive infection protein; KEGG: cef:CE0449 hypothetical protein; abortive infection protein complement(3120819..3121418) Clostridium beijerinckii NCIMB 8052 5293883 YP_001309795.1 CDS Cbei_2686 NC_009617.1 3122188 3123006 R PFAM: regulatory protein, MerR; transcription activator, effector binding; KEGG: bce:BC3486 transcriptional regulator, MerR family; transcription activator, effector binding complement(3122188..3123006) Clostridium beijerinckii NCIMB 8052 5293884 YP_001309796.1 CDS Cbei_2687 NC_009617.1 3123682 3124164 R PFAM: GCN5-related N-acetyltransferase; KEGG: mba:Mbar_A2328 hypothetical protein; N-acetyltransferase GCN5 complement(3123682..3124164) Clostridium beijerinckii NCIMB 8052 5293885 YP_001309797.1 CDS Cbei_2688 NC_009617.1 3124297 3124812 R PFAM: GCN5-related N-acetyltransferase; KEGG: ser:SERP0994 acetyltransferase, GNAT family; N-acetyltransferase GCN5 complement(3124297..3124812) Clostridium beijerinckii NCIMB 8052 5293886 YP_001309798.1 CDS Cbei_2689 NC_009617.1 3125007 3125354 R KEGG: cac:CAC0159 hypothetical protein; hypothetical protein complement(3125007..3125354) Clostridium beijerinckii NCIMB 8052 5293887 YP_001309799.1 CDS Cbei_2690 NC_009617.1 3125466 3126158 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3125466..3126158) Clostridium beijerinckii NCIMB 8052 5293888 YP_001309800.1 CDS Cbei_2691 NC_009617.1 3126155 3127087 R PFAM: homocysteine S-methyltransferase; KEGG: bth:BT_1409 hypothetical protein; homocysteine S-methyltransferase complement(3126155..3127087) Clostridium beijerinckii NCIMB 8052 5293889 YP_001309801.1 CDS Cbei_2692 NC_009617.1 3127244 3127507 R hypothetical protein complement(3127244..3127507) Clostridium beijerinckii NCIMB 8052 5293890 YP_001309802.1 CDS Cbei_2693 NC_009617.1 3127788 3128477 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mba:Mbar_A0557 haloacid dehalogenase-like hydrolase family protein; HAD family hydrolase complement(3127788..3128477) Clostridium beijerinckii NCIMB 8052 5293891 YP_001309803.1 CDS Cbei_2694 NC_009617.1 3128508 3128732 R hypothetical protein complement(3128508..3128732) Clostridium beijerinckii NCIMB 8052 5293892 YP_001309804.1 CDS Cbei_2696 NC_009617.1 3129213 3129557 R KEGG: mba:Mbar_A2331 hypothetical protein; hypothetical protein complement(3129213..3129557) Clostridium beijerinckii NCIMB 8052 5296381 YP_001309805.1 CDS Cbei_2697 NC_009617.1 3129592 3130086 R KEGG: ljo:LJ1221 hypothetical protein; hypothetical protein complement(3129592..3130086) Clostridium beijerinckii NCIMB 8052 5293894 YP_001309806.1 CDS Cbei_2698 NC_009617.1 3130393 3130785 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: tde:TDE1774 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(3130393..3130785) Clostridium beijerinckii NCIMB 8052 5293895 YP_001309807.1 CDS Cbei_2699 NC_009617.1 3131113 3132255 R KEGG: pfa:PF14_0250 hypothetical protein; hypothetical protein complement(3131113..3132255) Clostridium beijerinckii NCIMB 8052 5293896 YP_001309808.1 CDS Cbei_2700 NC_009617.1 3132242 3132733 R TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: ctc:CTC00553 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 factor complement(3132242..3132733) Clostridium beijerinckii NCIMB 8052 5293897 YP_001309809.1 CDS Cbei_2701 NC_009617.1 3133310 3134482 R PFAM: cell wall binding repeat-containing protein; copper amine oxidase domain protein; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; cell wall binding repeat-containing protein complement(3133310..3134482) Clostridium beijerinckii NCIMB 8052 5293898 YP_001309810.1 CDS Cbei_2702 NC_009617.1 3134926 3136182 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dsy:DSY3360 hypothetical protein; RND family efflux transporter MFP subunit complement(3134926..3136182) Clostridium beijerinckii NCIMB 8052 5293899 YP_001309811.1 CDS Cbei_2703 NC_009617.1 3136172 3139345 R PFAM: acriflavin resistance protein; KEGG: chu:CHU_2809 cation efflux protein; acriflavin resistance protein complement(3136172..3139345) Clostridium beijerinckii NCIMB 8052 5293900 YP_001309812.1 CDS Cbei_2704 NC_009617.1 3140095 3140694 R PFAM: RDD domain containing protein; RDD domain-containing protein complement(3140095..3140694) Clostridium beijerinckii NCIMB 8052 5293901 YP_001309813.1 CDS Cbei_2705 NC_009617.1 3140707 3141888 R PFAM: aminotransferase, class I and II; KEGG: efa:EF0029 aminotransferase, class II; class I and II aminotransferase complement(3140707..3141888) Clostridium beijerinckii NCIMB 8052 5293902 YP_001309814.1 CDS Cbei_2706 NC_009617.1 3141889 3142977 R PFAM: creatinase; peptidase M24; KEGG: ser:SERP1094 proline dipeptidase; peptidase M24 complement(3141889..3142977) Clostridium beijerinckii NCIMB 8052 5293903 YP_001309815.1 CDS Cbei_2707 NC_009617.1 3143104 3144417 R TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system, EIIC; KEGG: lmf:LMOf2365_0895 PTS system, beta-glucoside-specific, IIC component; PTS system lactose/cellobiose family transporter subunit IIC complement(3143104..3144417) Clostridium beijerinckii NCIMB 8052 5293904 YP_001309816.1 CDS Cbei_2708 NC_009617.1 3144430 3144768 R PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: lin:lin0873 similar to PTS system, beta-glucoside enzyme IIB component; phosphotransferase system, lactose/cellobiose-specific IIB subunit complement(3144430..3144768) Clostridium beijerinckii NCIMB 8052 5293905 YP_001309817.1 CDS Cbei_2709 NC_009617.1 3144770 3145093 R PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: vfi:VF0607 PTS system, diacetylchitobiose-specific IIA component; PTS system lactose/cellobiose-specific transporter subunit IIA complement(3144770..3145093) Clostridium beijerinckii NCIMB 8052 5293906 YP_001309818.1 CDS Cbei_2710 NC_009617.1 3145086 3146147 R metalloprotein; exoaminopeptidase complement(3145086..3146147) Clostridium beijerinckii NCIMB 8052 5293907 YP_001309819.1 CDS Cbei_2711 NC_009617.1 3146140 3148047 R PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PRD domain protein; Helix-turn-helix, type 11 domain protein; KEGG: btl:BALH_0718 transcription antiterminator, BglG family; transcriptional antiterminator BglG complement(3146140..3148047) Clostridium beijerinckii NCIMB 8052 5293908 YP_001309820.1 CDS Cbei_2712 NC_009617.1 3148622 3149782 D KEGG: cpr:CPR_0878 FliB family protein; FliB family protein 3148622..3149782 Clostridium beijerinckii NCIMB 8052 5293909 YP_001309821.1 CDS Cbei_2714 NC_009617.1 3150521 3151966 R KEGG: cac:CAC1028 hydrolase of alpha/beta superfamily, possible membrane associated lipase; alpha/beta fold family hydrolase complement(3150521..3151966) Clostridium beijerinckii NCIMB 8052 5296382 YP_001309822.1 CDS Cbei_2715 NC_009617.1 3152535 3152822 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: syg:sync_2670 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(3152535..3152822) Clostridium beijerinckii NCIMB 8052 5293911 YP_001309823.1 CDS Cbei_2716 NC_009617.1 3153069 3153407 D hypothetical protein 3153069..3153407 Clostridium beijerinckii NCIMB 8052 5293912 YP_001309824.1 CDS Cbei_2717 NC_009617.1 3153886 3154341 R PFAM: transcription activator, effector binding; KEGG: cac:CAC3490 DNA gyrase inhibitory protein, GyrI; transcription activator, effector binding complement(3153886..3154341) Clostridium beijerinckii NCIMB 8052 5293913 YP_001309825.1 CDS Cbei_2718 NC_009617.1 3154427 3154885 R KEGG: fnu:FN0643 hypothetical protein; hypothetical protein complement(3154427..3154885) Clostridium beijerinckii NCIMB 8052 5293914 YP_001309826.1 CDS Cbei_2719 NC_009617.1 3154948 3155568 R KEGG: smu:SMU.1470c hypothetical protein; hypothetical protein complement(3154948..3155568) Clostridium beijerinckii NCIMB 8052 5293915 YP_001309827.1 CDS Cbei_2720 NC_009617.1 3155643 3156446 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cpr:CPR_2063 polyferredoxin; 4Fe-4S ferredoxin complement(3155643..3156446) Clostridium beijerinckii NCIMB 8052 5293916 YP_001309828.1 CDS Cbei_2721 NC_009617.1 3156572 3156979 R PFAM: regulatory protein, MerR; KEGG: gka:GK3095 transcriptional regulator involved in mercury resistance operon; MerR family transcriptional regulator complement(3156572..3156979) Clostridium beijerinckii NCIMB 8052 5293917 YP_001309829.1 CDS Cbei_2722 NC_009617.1 3157392 3157754 R PFAM: protein of unknown function DUF1232; KEGG: cac:CAC1011 uncharacterized small membrane protein, homolog of ykvA B.subtilis; hypothetical protein complement(3157392..3157754) Clostridium beijerinckii NCIMB 8052 5293918 YP_001309830.1 CDS Cbei_2723 NC_009617.1 3157931 3158962 R PFAM: helix-turn-helix domain protein; KEGG: ctc:CTC00641 transcriptional regulatory protein; XRE family transcriptional regulator complement(3157931..3158962) Clostridium beijerinckii NCIMB 8052 5293919 YP_001309831.1 CDS Cbei_2724 NC_009617.1 3159428 3161665 R KEGG: bcz:BCZK0951 ATP-dependent DNA helicase replicase; ATP-dependent DNA helicase replicase complement(3159428..3161665) Clostridium beijerinckii NCIMB 8052 5293920 YP_001309832.1 CDS Cbei_2725 NC_009617.1 3161977 3163248 R PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; KEGG: ana:all0637 two-component hybrid sensor and regulator; response regulator receiver sensor signal transduction histidine kinase complement(3161977..3163248) Clostridium beijerinckii NCIMB 8052 5293921 YP_001309833.1 CDS Cbei_2726 NC_009617.1 3163261 3164286 R PFAM: response regulator receiver; KEGG: vch:VC1087 response regulator; response regulator receiver protein complement(3163261..3164286) Clostridium beijerinckii NCIMB 8052 5293922 YP_001309834.1 CDS Cbei_2727 NC_009617.1 3164288 3165463 R PFAM: response regulator receiver; Metal-dependent hydrolase HDOD; KEGG: dvl:Dvul_2652 response regulator receiver modulated metal dependent phosphohydrolase; signal transduction protein complement(3164288..3165463) Clostridium beijerinckii NCIMB 8052 5293923 YP_001309835.1 CDS Cbei_2728 NC_009617.1 3165456 3166757 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; SMART: PAS domain containing protein; KEGG: hch:HCH_00674 signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase complement(3165456..3166757) Clostridium beijerinckii NCIMB 8052 5293924 YP_001309836.1 CDS Cbei_2729 NC_009617.1 3167312 3167680 R PFAM: Carboxymuconolactone decarboxylase; KEGG: pna:Pnap_2188 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase complement(3167312..3167680) Clostridium beijerinckii NCIMB 8052 5293925 YP_001309837.1 CDS Cbei_2730 NC_009617.1 3167685 3169316 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein, central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bcl:ABC2009 acetolactate synthase large subunit; thiamine pyrophosphate protein, central region complement(3167685..3169316) Clostridium beijerinckii NCIMB 8052 5293926 YP_001309838.1 CDS Cbei_2731 NC_009617.1 3169448 3171391 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cno:NT01CX_0026 2,4-dienoyl-CoA reductase; NADH:flavin oxidoreductase complement(3169448..3171391) Clostridium beijerinckii NCIMB 8052 5293927 YP_001309839.1 CDS Cbei_2732 NC_009617.1 3171517 3172956 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cth:Cthe_0511 histidine kinase; histidine kinase complement(3171517..3172956) Clostridium beijerinckii NCIMB 8052 5293928 YP_001309840.1 CDS Cbei_2733 NC_009617.1 3173828 3175102 D KEGG: cpf:CPF_0713 hypothetical protein; hypothetical protein 3173828..3175102 Clostridium beijerinckii NCIMB 8052 5293929 YP_001309841.1 CDS Cbei_2734 NC_009617.1 3175276 3175617 R PFAM: helix-turn-helix, HxlR type; KEGG: bld:BLi00585 hypothetical protein; HxlR family transcriptional regulator complement(3175276..3175617) Clostridium beijerinckii NCIMB 8052 5293930 YP_001309842.1 CDS Cbei_2735 NC_009617.1 3175749 3176396 D PFAM: NADPH-dependent FMN reductase; KEGG: mma:MM3119 iron-sulfur flavoprotein; NADPH-dependent FMN reductase 3175749..3176396 Clostridium beijerinckii NCIMB 8052 5293931 YP_001309843.1 CDS Cbei_2736 NC_009617.1 3176508 3178541 R TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: bsu:BG14098 monovalent cation:proton antiporter; Na+/H+ antiporter complement(3176508..3178541) Clostridium beijerinckii NCIMB 8052 5293932 YP_001309844.1 CDS Cbei_2737 NC_009617.1 3178766 3180235 R catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase complement(3178766..3180235) Clostridium beijerinckii NCIMB 8052 5293933 YP_001309845.1 CDS Cbei_2738 NC_009617.1 3181180 3183324 R PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; M trans-acting positive regulator; PRD domain protein; Helix-turn-helix, type 11 domain protein; KEGG: tte:TTE0303 phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); transcriptional antiterminator BglG complement(3181180..3183324) Clostridium beijerinckii NCIMB 8052 5293934 YP_001309846.1 CDS ulaA NC_009617.1 3183554 3184912 R membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC complement(3183554..3184912) Clostridium beijerinckii NCIMB 8052 5293935 YP_001309847.1 CDS Cbei_2740 NC_009617.1 3184924 3185208 R PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: spb:M28_Spy1651 PTS system, IIB component; phosphotransferase system, lactose/cellobiose-specific IIB subunit complement(3184924..3185208) Clostridium beijerinckii NCIMB 8052 5293936 YP_001309848.1 CDS Cbei_2741 NC_009617.1 3185254 3185703 R PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: tte:TTE0303 phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN complement(3185254..3185703) Clostridium beijerinckii NCIMB 8052 5293937 YP_001309849.1 CDS Cbei_2742 NC_009617.1 3185726 3186442 R similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase complement(3185726..3186442) Clostridium beijerinckii NCIMB 8052 5293938 YP_001309850.1 CDS Cbei_2743 NC_009617.1 3186697 3187185 D PFAM: GCN5-related N-acetyltransferase; KEGG: dra:DR0188 hypothetical protein; N-acetyltransferase GCN5 3186697..3187185 Clostridium beijerinckii NCIMB 8052 5293939 YP_001309851.1 CDS Cbei_2744 NC_009617.1 3187588 3187977 R hypothetical protein complement(3187588..3187977) Clostridium beijerinckii NCIMB 8052 5293940 YP_001309852.1 CDS Cbei_2745 NC_009617.1 3188000 3189622 R PFAM: zinc finger, SWIM domain protein; zinc finger SWIM domain-containing protein complement(3188000..3189622) Clostridium beijerinckii NCIMB 8052 5293941 YP_001309853.1 CDS Cbei_2746 NC_009617.1 3189742 3190872 R PFAM: VWA containing CoxE family protein; KEGG: lil:LA0697 hypothetical protein; VWA containing CoxE family protein complement(3189742..3190872) Clostridium beijerinckii NCIMB 8052 5293942 YP_001309854.1 CDS Cbei_2747 NC_009617.1 3191010 3193457 R KEGG: lil:LA0699 hypothetical protein; hypothetical protein complement(3191010..3193457) Clostridium beijerinckii NCIMB 8052 5293943 YP_001309855.1 CDS Cbei_2748 NC_009617.1 3193432 3194547 R PFAM: ATPase associated with various cellular activities, AAA_5; KEGG: lic:LIC12902 hypothetical protein; ATPase complement(3193432..3194547) Clostridium beijerinckii NCIMB 8052 5293944 YP_001309856.1 CDS Cbei_2749 NC_009617.1 3194572 3195411 R KEGG: bce:BC3270 hypothetical membrane spanning protein; hypothetical protein complement(3194572..3195411) Clostridium beijerinckii NCIMB 8052 5293945 YP_001309857.1 CDS Cbei_2750 NC_009617.1 3195386 3198892 R KEGG: bce:BC3255 molybdate metabolism regulator; molybdate metabolism regulator complement(3195386..3198892) Clostridium beijerinckii NCIMB 8052 5293946 YP_001309858.1 CDS Cbei_2751 NC_009617.1 3199210 3199710 R hypothetical protein complement(3199210..3199710) Clostridium beijerinckii NCIMB 8052 5293947 YP_001309859.1 CDS Cbei_2752 NC_009617.1 3199775 3203170 R KEGG: bce:BC3255 molybdate metabolism regulator; hypothetical protein complement(3199775..3203170) Clostridium beijerinckii NCIMB 8052 5293948 YP_001309860.1 CDS gldA NC_009617.1 3203627 3204718 D forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; glycerol dehydrogenase 3203627..3204718 Clostridium beijerinckii NCIMB 8052 5293949 YP_001309861.1 CDS Cbei_2754 NC_009617.1 3205120 3206463 R TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: bsu:BG11384 acetyl-CoA carboxylase (biotin carboxylase subunit); acetyl-CoA carboxylase, biotin carboxylase complement(3205120..3206463) Clostridium beijerinckii NCIMB 8052 5293950 YP_001309862.1 CDS Cbei_2755 NC_009617.1 3206486 3206947 R PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: lmo:lmo1356 acetyl-CoA carboxylase biotin carboxyl carrier protein; biotin/lipoyl attachment domain-containing protein complement(3206486..3206947) Clostridium beijerinckii NCIMB 8052 5293951 YP_001309863.1 CDS Cbei_2756 NC_009617.1 3206962 3207963 R TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: bld:BLi00502 KipA; urea amidolyase-like protein complement(3206962..3207963) Clostridium beijerinckii NCIMB 8052 5293952 YP_001309864.1 CDS Cbei_2757 NC_009617.1 3207963 3208679 R PFAM: Allophanate hydrolase subunit 1; KEGG: bld:BLi00501 KipI; allophanate hydrolase subunit 1 complement(3207963..3208679) Clostridium beijerinckii NCIMB 8052 5293953 YP_001309865.1 CDS Cbei_2758 NC_009617.1 3208741 3209871 R TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; KEGG: cth:Cthe_2697 alanine racemase; alanine racemase complement(3208741..3209871) Clostridium beijerinckii NCIMB 8052 5293954 YP_001309866.1 CDS Cbei_2759 NC_009617.1 3209894 3210661 R PFAM: LamB/YcsF family protein; KEGG: cjj:CJJ81176_1526 LamB/YcsF family protein; LamB/YcsF family protein complement(3209894..3210661) Clostridium beijerinckii NCIMB 8052 5293955 YP_001309867.1 CDS Cbei_2760 NC_009617.1 3210698 3211486 R PFAM: protein of unknown function DUF1445; KEGG: par:Psyc_1103 hypothetical protein; hypothetical protein complement(3210698..3211486) Clostridium beijerinckii NCIMB 8052 5293956 YP_001309868.1 CDS Cbei_2761 NC_009617.1 3211552 3212625 R KEGG: dsy:DSY4353 hypothetical protein; hypothetical protein complement(3211552..3212625) Clostridium beijerinckii NCIMB 8052 5293957 YP_001309869.1 CDS Cbei_2762 NC_009617.1 3212636 3213484 R PFAM: aminotransferase, class IV; KEGG: cac:CAC0792 D-amino acid aminotransferase; class IV aminotransferase complement(3212636..3213484) Clostridium beijerinckii NCIMB 8052 5293958 YP_001309870.1 CDS Cbei_2763 NC_009617.1 3213738 3214193 R PFAM: regulatory protein, AsnC/Lrp family; KEGG: plt:Plut_1414 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(3213738..3214193) Clostridium beijerinckii NCIMB 8052 5293959 YP_001309871.1 CDS Cbei_2764 NC_009617.1 3214207 3214830 R KEGG: bth:BT_2093 hypothetical protein; hypothetical protein complement(3214207..3214830) Clostridium beijerinckii NCIMB 8052 5293960 YP_001309872.1 CDS Cbei_2765 NC_009617.1 3214918 3215622 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: swo:Swol_2552 branched-chain amino acid ABC transporter (ATP-binding protein); ABC transporter complement(3214918..3215622) Clostridium beijerinckii NCIMB 8052 5293961 YP_001309873.1 CDS Cbei_2766 NC_009617.1 3215624 3216394 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: spd:SPD_0655 branched-chain amino acid ABC transporter ATP-binding protein; ABC transporter complement(3215624..3216394) Clostridium beijerinckii NCIMB 8052 5293962 YP_001309874.1 CDS Cbei_2767 NC_009617.1 3216396 3217448 R PFAM: inner-membrane translocator; KEGG: chy:CHY_2230 high affinity branched-chain amino acid ABC transporter permease; inner-membrane translocator complement(3216396..3217448) Clostridium beijerinckii NCIMB 8052 5293963 YP_001309875.1 CDS Cbei_2768 NC_009617.1 3217452 3218336 R PFAM: inner-membrane translocator; KEGG: chy:CHY_2231 high affinity branched-chain amino acid ABC transporter permease; inner-membrane translocator complement(3217452..3218336) Clostridium beijerinckii NCIMB 8052 5293964 YP_001309876.1 CDS Cbei_2769 NC_009617.1 3218440 3219621 R PFAM: Extracellular ligand-binding receptor; KEGG: gka:GK2980 branched chain amino acid ABC transporter (substrate-binding protein); extracellular ligand-binding receptor complement(3218440..3219621) Clostridium beijerinckii NCIMB 8052 5293965 YP_001309877.1 CDS Cbei_2770 NC_009617.1 3220290 3221390 D PFAM: domain of unknown function DUF1745; KEGG: ppd:Ppro_3141 domain of unknown function DUF1745; hypothetical protein 3220290..3221390 Clostridium beijerinckii NCIMB 8052 5293966 YP_001309878.1 CDS Cbei_2771 NC_009617.1 3221407 3222393 D PFAM: chemotaxis sensory transducer; KEGG: cac:CAC2483 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 3221407..3222393 Clostridium beijerinckii NCIMB 8052 5293967 YP_001309879.1 CDS Cbei_2772 NC_009617.1 3222869 3224608 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ctc:CTC02429 ABC transporter ATP-binding protein; ABC transporter 3222869..3224608 Clostridium beijerinckii NCIMB 8052 5293968 YP_001309880.1 CDS Cbei_2773 NC_009617.1 3224712 3225641 D KEGG: ctc:CTC01798 hypothetical protein; hypothetical protein 3224712..3225641 Clostridium beijerinckii NCIMB 8052 5293969 YP_001309881.1 CDS Cbei_2774 NC_009617.1 3225851 3226939 R PFAM: cell wall binding repeat-containing protein; KEGG: mac:MA4292 cell surface protein; cell wall binding repeat-containing protein complement(3225851..3226939) Clostridium beijerinckii NCIMB 8052 5293970 YP_001309882.1 CDS Cbei_2775 NC_009617.1 3227233 3227637 D PFAM: NUDIX hydrolase; KEGG: cno:NT01CX_2016 MutT/NUDIX family protein; NUDIX hydrolase 3227233..3227637 Clostridium beijerinckii NCIMB 8052 5293971 YP_001309883.1 CDS Cbei_2776 NC_009617.1 3227742 3228416 R PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: mbu:Mbur_1482 nitrite and sulphite reductase, 4Fe-4S subunit; nitrite and sulfite reductase 4Fe-4S subunit complement(3227742..3228416) Clostridium beijerinckii NCIMB 8052 5293972 YP_001309884.1 CDS Cbei_2777 NC_009617.1 3228735 3229484 D PFAM: beta-lactamase domain protein; KEGG: eba:ebA6101 hypothetical protein; beta-lactamase domain-containing protein 3228735..3229484 Clostridium beijerinckii NCIMB 8052 5293973 YP_001309885.1 CDS Cbei_2778 NC_009617.1 3229515 3230258 D PFAM: nitroreductase; KEGG: cac:CAC0718 ortholog YcnD B.subtilis, nitroreductase; nitroreductase 3229515..3230258 Clostridium beijerinckii NCIMB 8052 5293974 YP_001309886.1 CDS Cbei_2779 NC_009617.1 3231015 3232460 R PFAM: helicase domain protein; DbpA, RNA-binding domain protein; type III restriction protein, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: bce:BC5451 ATP-dependent RNA helicase; DEAD/DEAH box helicase complement(3231015..3232460) Clostridium beijerinckii NCIMB 8052 5293975 YP_001309887.1 CDS Cbei_2780 NC_009617.1 3232688 3233557 R TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: lwe:lwe0631 hydrolase, Cof family; cof family hydrolase complement(3232688..3233557) Clostridium beijerinckii NCIMB 8052 5293976 YP_001309888.1 CDS Cbei_2781 NC_009617.1 3233600 3235003 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: spd:SPD_1738 MATE efflux family protein DinF; MATE efflux family protein complement(3233600..3235003) Clostridium beijerinckii NCIMB 8052 5293977 YP_001309889.1 CDS Cbei_2782 NC_009617.1 3235380 3235667 R KEGG: dsy:DSY3615 hypothetical protein; hypothetical protein complement(3235380..3235667) Clostridium beijerinckii NCIMB 8052 5293978 YP_001309890.1 CDS Cbei_2783 NC_009617.1 3235707 3236177 R PFAM: response regulator receiver; KEGG: dsy:DSY3627 hypothetical protein; response regulator receiver protein complement(3235707..3236177) Clostridium beijerinckii NCIMB 8052 5293979 YP_001309891.1 CDS Cbei_2784 NC_009617.1 3236966 3237229 R hypothetical protein complement(3236966..3237229) Clostridium beijerinckii NCIMB 8052 5293980 YP_001309892.1 CDS Cbei_2786 NC_009617.1 3237755 3239326 R KEGG: cno:NT01CX_0224 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase complement(3237755..3239326) Clostridium beijerinckii NCIMB 8052 5296383 YP_001309893.1 CDS Cbei_2787 NC_009617.1 3239684 3241405 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01881 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(3239684..3241405) Clostridium beijerinckii NCIMB 8052 5293982 YP_001309894.1 CDS Cbei_2788 NC_009617.1 3241890 3242099 D PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: cpf:CPF_1452 cold shock protein; cold-shock DNA-binding domain-containing protein 3241890..3242099 Clostridium beijerinckii NCIMB 8052 5293983 YP_001309895.1 CDS Cbei_2789 NC_009617.1 3242272 3243225 R TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; KEGG: fnu:FN1169 L-lactate dehydrogenase; L-lactate dehydrogenase complement(3242272..3243225) Clostridium beijerinckii NCIMB 8052 5293984 YP_001309896.1 CDS Cbei_2790 NC_009617.1 3243320 3244339 R PFAM: protein of unknown function DUF534; KEGG: swo:Swol_0325 hypothetical protein; hypothetical protein complement(3243320..3244339) Clostridium beijerinckii NCIMB 8052 5293985 YP_001309897.1 CDS Cbei_2791 NC_009617.1 3244516 3245220 R hypothetical protein complement(3244516..3245220) Clostridium beijerinckii NCIMB 8052 5293986 YP_001309898.1 CDS Cbei_2792 NC_009617.1 3245611 3245928 R PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: bat:BAS3518 hypothetical protein; MazG nucleotide pyrophosphohydrolase complement(3245611..3245928) Clostridium beijerinckii NCIMB 8052 5293987 YP_001309899.1 CDS Cbei_2793 NC_009617.1 3246667 3248400 D PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_1777 ABC transporter permease/ATP-binding protein; ABC transporter 3246667..3248400 Clostridium beijerinckii NCIMB 8052 5293988 YP_001309900.1 CDS Cbei_2794 NC_009617.1 3248402 3250171 D PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_1776 ABC transporter permease/ATP-binding protein; ABC transporter 3248402..3250171 Clostridium beijerinckii NCIMB 8052 5293989 YP_001309901.1 CDS Cbei_2795 NC_009617.1 3250427 3251968 R KEGG: ctc:CTC01462 hypothetical protein; hypothetical protein complement(3250427..3251968) Clostridium beijerinckii NCIMB 8052 5293990 YP_001309902.1 CDS Cbei_2796 NC_009617.1 3252259 3252741 R KEGG: cff:CFF8240_1263 Mug G:T/U mismatch-specific DNA glycosylase; Mug G:T/U mismatch-specific DNA glycosylase complement(3252259..3252741) Clostridium beijerinckii NCIMB 8052 5293991 YP_001309903.1 CDS Cbei_2797 NC_009617.1 3253274 3253930 R PFAM: cell wall binding repeat-containing protein; KEGG: mac:MA4292 cell surface protein; cell wall binding repeat-containing protein complement(3253274..3253930) Clostridium beijerinckii NCIMB 8052 5293992 YP_001309904.1 CDS Cbei_2798 NC_009617.1 3254180 3254809 R PFAM: Phosphoglycerate mutase; KEGG: cno:NT01CX_2076 phosphoglycerate mutase family protein; phosphoglycerate mutase complement(3254180..3254809) Clostridium beijerinckii NCIMB 8052 5293993 YP_001309905.1 CDS Cbei_2799 NC_009617.1 3255175 3256356 R KEGG: chy:CHY_1717 hypothetical protein; hypothetical protein complement(3255175..3256356) Clostridium beijerinckii NCIMB 8052 5293994 YP_001309906.1 CDS Cbei_2800 NC_009617.1 3256343 3259597 R KEGG: chy:CHY_1718 MukB N-terminal domain/M protein repeat protein; M protein-like MukB domain-containing protein complement(3256343..3259597) Clostridium beijerinckii NCIMB 8052 5293995 YP_001309907.1 CDS Cbei_2801 NC_009617.1 3259572 3260177 R KEGG: chy:CHY_1719 hypothetical protein; hypothetical protein complement(3259572..3260177) Clostridium beijerinckii NCIMB 8052 5293996 YP_001309908.1 CDS Cbei_2802 NC_009617.1 3260180 3261571 R KEGG: chy:CHY_1720 hypothetical protein; hypothetical protein complement(3260180..3261571) Clostridium beijerinckii NCIMB 8052 5293997 YP_001309909.1 CDS Cbei_2803 NC_009617.1 3262303 3262992 R KEGG: bce:BC4454 hypothetical protein; hypothetical protein complement(3262303..3262992) Clostridium beijerinckii NCIMB 8052 5293998 YP_001309910.1 CDS Cbei_2804 NC_009617.1 3263413 3264714 D PFAM: transposase IS116/IS110/IS902 family protein; KEGG: dsy:DSY3551 hypothetical protein; transposase IS116/IS110/IS902 family protein 3263413..3264714 Clostridium beijerinckii NCIMB 8052 5293999 YP_001309911.1 CDS Cbei_2805 NC_009617.1 3265196 3267052 R KEGG: sdn:Sden_3579 hypothetical protein; hypothetical protein complement(3265196..3267052) Clostridium beijerinckii NCIMB 8052 5294000 YP_001309912.1 CDS Cbei_2806 NC_009617.1 3267053 3268246 R KEGG: sdn:Sden_3581 hypothetical protein; hypothetical protein complement(3267053..3268246) Clostridium beijerinckii NCIMB 8052 5294001 YP_001309913.1 CDS Cbei_2807 NC_009617.1 3268352 3268960 R PFAM: Domain of unknown function DUF1863; KEGG: bce:BC4454 hypothetical protein; hypothetical protein complement(3268352..3268960) Clostridium beijerinckii NCIMB 8052 5294002 YP_001309914.1 CDS Cbei_2808 NC_009617.1 3269030 3270466 R KEGG: tcx:Tcr_0373 hypothetical protein; hypothetical protein complement(3269030..3270466) Clostridium beijerinckii NCIMB 8052 5294003 YP_001309915.1 CDS Cbei_2809 NC_009617.1 3270586 3271086 R PFAM: Domain of unknown function DUF1863; KEGG: ajs:Ajs_2632 hypothetical protein; hypothetical protein complement(3270586..3271086) Clostridium beijerinckii NCIMB 8052 5294004 YP_001309916.1 CDS Cbei_2810 NC_009617.1 3271545 3274082 R PFAM: helicase domain protein; type III restriction protein, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cno:NT01CX_0321 helicase; type III restriction protein, res subunit complement(3271545..3274082) Clostridium beijerinckii NCIMB 8052 5294005 YP_001309917.1 CDS Cbei_2811 NC_009617.1 3274301 3274609 R KEGG: ctc:CTC00658 hypothetical protein; hypothetical protein complement(3274301..3274609) Clostridium beijerinckii NCIMB 8052 5294006 YP_001309918.1 CDS Cbei_2812 NC_009617.1 3274681 3275310 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cvi:CV1741 hypothetical protein; type 11 methyltransferase complement(3274681..3275310) Clostridium beijerinckii NCIMB 8052 5294007 YP_001309919.1 CDS Cbei_2813 NC_009617.1 3275557 3275979 R hypothetical protein complement(3275557..3275979) Clostridium beijerinckii NCIMB 8052 5294008 YP_001309920.1 CDS Cbei_2815 NC_009617.1 3276948 3277760 R TIGRFAM: phage replisome organizer, KEGG: sac:SACOL0341 hypothetical protein; phage replisome organizer complement(3276948..3277760) Clostridium beijerinckii NCIMB 8052 5296384 YP_001309921.1 CDS Cbei_2816 NC_009617.1 3278364 3279257 R PFAM: helix-turn-helix- domain containing protein, AraC type; transcription activator, effector binding; KEGG: dsy:DSY2799 hypothetical protein; transcription activator, effector binding complement(3278364..3279257) Clostridium beijerinckii NCIMB 8052 5294010 YP_001309922.1 CDS Cbei_2817 NC_009617.1 3279810 3280133 R KEGG: bat:BAS1975 hypothetical protein; hypothetical protein complement(3279810..3280133) Clostridium beijerinckii NCIMB 8052 5294011 YP_001309923.1 CDS Cbei_2818 NC_009617.1 3280439 3281125 D KEGG: rno:683977 hypothetical protein LOC683977; hypothetical protein 3280439..3281125 Clostridium beijerinckii NCIMB 8052 5294012 YP_001309924.1 CDS Cbei_2819 NC_009617.1 3281285 3282181 R KEGG: lsl:LSL_0951 hypothetical protein; hypothetical protein complement(3281285..3282181) Clostridium beijerinckii NCIMB 8052 5294013 YP_001309925.1 CDS Cbei_2820 NC_009617.1 3282516 3283466 R PFAM: elongation factor G, domain IV; KEGG: cth:Cthe_2729 translation elongation factor G; elongation factor G domain-containing protein complement(3282516..3283466) Clostridium beijerinckii NCIMB 8052 5294014 YP_001309926.1 CDS Cbei_2821 NC_009617.1 3283501 3283917 R hypothetical protein complement(3283501..3283917) Clostridium beijerinckii NCIMB 8052 5294015 YP_001309927.1 CDS Cbei_2822 NC_009617.1 3284063 3285235 R hypothetical protein complement(3284063..3285235) Clostridium beijerinckii NCIMB 8052 5294016 YP_001309928.1 CDS Cbei_2823 NC_009617.1 3285597 3286169 R TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; KEGG: vfi:VFA0815 DNA-3-methyladenine glycosylase; DNA-3-methyladenine glycosylase I complement(3285597..3286169) Clostridium beijerinckii NCIMB 8052 5294017 YP_001309929.1 CDS Cbei_2824 NC_009617.1 3286346 3287665 R PFAM: NERD domain protein; KEGG: ssa:SSA_0274 hypothetical protein; NERD domain-containing protein complement(3286346..3287665) Clostridium beijerinckii NCIMB 8052 5294018 YP_001309930.1 CDS Cbei_2825 NC_009617.1 3288357 3290126 D SMART: beta and gamma crystallin; KEGG: mva:Mvan_4739 hypothetical protein; beta and gamma crystallin 3288357..3290126 Clostridium beijerinckii NCIMB 8052 5294019 YP_001309931.1 CDS Cbei_2826 NC_009617.1 3290315 3291424 R PFAM: Carbohydrate-binding family V/XII; KEGG: sco:SCO5673 secreted chitinase; carbohydrate-binding family V/XII protein complement(3290315..3291424) Clostridium beijerinckii NCIMB 8052 5294020 YP_001309932.1 CDS Cbei_2828 NC_009617.1 3292188 3293420 R PFAM: glycoside hydrolase, family 16; Carbohydrate-binding family V/XII; Fibronectin, type III domain protein; KEGG: sus:Acid_2816 glycoside hydrolase, family 16; glycoside hydrolase complement(3292188..3293420) Clostridium beijerinckii NCIMB 8052 5296385 YP_001309933.1 CDS Cbei_2829 NC_009617.1 3293714 3294466 R Heat shock-induced; RNA polymerase sigma factor SigI complement(3293714..3294466) Clostridium beijerinckii NCIMB 8052 5294022 YP_001309934.1 CDS Cbei_2830 NC_009617.1 3294950 3296749 D PFAM: glycoside hydrolase, family 18; Carbohydrate-binding family V/XII; SMART: chitinase II; KEGG: cth:Cthe_0270 glycoside hydrolase, family 18; glycoside hydrolase 3294950..3296749 Clostridium beijerinckii NCIMB 8052 5294023 YP_001309935.1 CDS Cbei_2831 NC_009617.1 3296824 3297759 D PFAM: Carbohydrate-binding family V/XII; Lytic transglycosylase, catalytic; KEGG: ftl:FTL_1635 chitinase, fragment; carbohydrate-binding family V/XII protein 3296824..3297759 Clostridium beijerinckii NCIMB 8052 5294024 YP_001309936.1 CDS Cbei_2832 NC_009617.1 3298128 3299543 R PFAM: glycoside hydrolase, family 1; KEGG: cac:CAC0743 6-phospho-beta-glucosidase; glycoside hydrolase complement(3298128..3299543) Clostridium beijerinckii NCIMB 8052 5294025 YP_001309937.1 CDS Cbei_2833 NC_009617.1 3299844 3301736 R TIGRFAM: PTS system, glucose subfamily, IIA subunit; PTS system, beta-glucoside-specific IIABC subunit; PFAM: sugar-specific permease, EIIA 1 domain; phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: spd:SPD_0502 PTS system, beta-glucosides-specific IIABC components; PTS system beta-glucoside-specific transporter subunit IIABC complement(3299844..3301736) Clostridium beijerinckii NCIMB 8052 5294026 YP_001309938.1 CDS Cbei_2834 NC_009617.1 3302027 3302866 R PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: bld:BLi04201 transcriptional antiterminator required for substrate-dependent induction and catabolite repression of bglPH; RBL02059; transcriptional antiterminator BglG complement(3302027..3302866) Clostridium beijerinckii NCIMB 8052 5294027 YP_001309939.1 CDS Cbei_2835 NC_009617.1 3303320 3303877 R PFAM: regulatory protein, TetR; KEGG: bca:BCE_1210 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(3303320..3303877) Clostridium beijerinckii NCIMB 8052 5294028 YP_001309940.1 CDS Cbei_2836 NC_009617.1 3304065 3304847 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mla:Mlab_0618 hypothetical protein; 4Fe-4S ferredoxin 3304065..3304847 Clostridium beijerinckii NCIMB 8052 5294029 YP_001309941.1 CDS Cbei_2837 NC_009617.1 3305035 3306312 R PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: mgm:Mmc1_2928 plasmid pRiA4b ORF-3 family protein; plasmid pRiA4b ORF-3 family protein complement(3305035..3306312) Clostridium beijerinckii NCIMB 8052 5294030 YP_001309942.1 CDS Cbei_2838 NC_009617.1 3306534 3307007 D PFAM: regulatory protein, MarR; ArsR family transcriptional regulator; KEGG: bcz:BCZK3880 transcriptional regulator, MarR family; MarR family transcriptional regulator 3306534..3307007 Clostridium beijerinckii NCIMB 8052 5294031 YP_001309943.1 CDS Cbei_2839 NC_009617.1 3307030 3309024 D PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC00924 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 3307030..3309024 Clostridium beijerinckii NCIMB 8052 5294032 YP_001309944.1 CDS Cbei_2840 NC_009617.1 3309075 3309839 D PFAM: Extradiol ring-cleavage dioxygenase, class III protein, subunit B; KEGG: bce:BC1787 hypothetical protein; extradiol ring-cleavage dioxygenase III subunit B 3309075..3309839 Clostridium beijerinckii NCIMB 8052 5294033 YP_001309945.1 CDS Cbei_2841 NC_009617.1 3310074 3310736 R PFAM: SCP-like extracellular; KEGG: bld:BLi01607 YkwD; SCP-like extracellular protein complement(3310074..3310736) Clostridium beijerinckii NCIMB 8052 5294034 YP_001309946.1 CDS Cbei_2842 NC_009617.1 3311153 3311872 R KEGG: dsy:DSY2713 hypothetical protein; hypothetical protein complement(3311153..3311872) Clostridium beijerinckii NCIMB 8052 5294035 YP_001309947.1 CDS Cbei_2843 NC_009617.1 3311875 3312624 R KEGG: dsy:DSY2712 hypothetical protein; hypothetical protein complement(3311875..3312624) Clostridium beijerinckii NCIMB 8052 5294036 YP_001309948.1 CDS Cbei_2844 NC_009617.1 3312621 3313535 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY2711 hypothetical protein; ABC transporter complement(3312621..3313535) Clostridium beijerinckii NCIMB 8052 5294037 YP_001309949.1 CDS Cbei_2845 NC_009617.1 3313944 3314660 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dsy:DSY2710 hypothetical protein; two component transcriptional regulator 3313944..3314660 Clostridium beijerinckii NCIMB 8052 5294038 YP_001309950.1 CDS Cbei_2846 NC_009617.1 3314660 3316018 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: dsy:DSY2709 hypothetical protein; integral membrane sensor signal transduction histidine kinase 3314660..3316018 Clostridium beijerinckii NCIMB 8052 5294039 YP_001309951.1 CDS Cbei_2847 NC_009617.1 3316021 3316389 R hypothetical protein complement(3316021..3316389) Clostridium beijerinckii NCIMB 8052 5294040 YP_001309952.1 CDS Cbei_2849 NC_009617.1 3317039 3318349 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01881 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(3317039..3318349) Clostridium beijerinckii NCIMB 8052 5296386 YP_001309953.1 CDS Cbei_2850 NC_009617.1 3318493 3318756 R KEGG: cff:CFF8240_0065 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein complement(3318493..3318756) Clostridium beijerinckii NCIMB 8052 5294042 YP_001309954.1 CDS Cbei_2851 NC_009617.1 3319311 3319973 R PFAM: SCP-like extracellular; KEGG: bld:BLi01607 YkwD; SCP-like extracellular protein complement(3319311..3319973) Clostridium beijerinckii NCIMB 8052 5294043 YP_001309955.1 CDS Cbei_2852 NC_009617.1 3320317 3320913 R PFAM: isochorismatase hydrolase; KEGG: cac:CA_P0030 isochorismatase; isochorismatase hydrolase complement(3320317..3320913) Clostridium beijerinckii NCIMB 8052 5294044 YP_001309956.1 CDS Cbei_2853 NC_009617.1 3320954 3322147 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: cac:CA_P0029 permease MDR-related; major facilitator superfamily transporter complement(3320954..3322147) Clostridium beijerinckii NCIMB 8052 5294045 YP_001309957.1 CDS Cbei_2854 NC_009617.1 3322574 3323131 D PFAM: regulatory protein, TetR; KEGG: cac:CA_P0028 HTH transcriptional regulator TetR family; TetR family transcriptional regulator 3322574..3323131 Clostridium beijerinckii NCIMB 8052 5294046 YP_001309958.1 CDS Cbei_2855 NC_009617.1 3323459 3323767 R KEGG: cac:CAC2823 hypothetical protein; hypothetical protein complement(3323459..3323767) Clostridium beijerinckii NCIMB 8052 5294047 YP_001309959.1 CDS Cbei_2856 NC_009617.1 3323853 3324461 R KEGG: bcz:BCZK2509 conserved hypothetical protein; possible phosphoribulokinase/uridine kinase family; hypothetical protein complement(3323853..3324461) Clostridium beijerinckii NCIMB 8052 5294048 YP_001309960.1 CDS Cbei_2857 NC_009617.1 3324734 3325483 R PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: hma:rrnAC3101 methyltransferase; type 11 methyltransferase complement(3324734..3325483) Clostridium beijerinckii NCIMB 8052 5294049 YP_001309961.1 CDS Cbei_2858 NC_009617.1 3326415 3326960 D hypothetical protein 3326415..3326960 Clostridium beijerinckii NCIMB 8052 5294050 YP_001309962.1 CDS Cbei_2859 NC_009617.1 3327005 3329383 R TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: cno:NT01CX_2348 sensory box/GGDEF family protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(3327005..3329383) Clostridium beijerinckii NCIMB 8052 5294051 YP_001309963.1 CDS Cbei_2860 NC_009617.1 3329806 3330660 R PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: cac:CAC0720 hypothetical protein; helix-turn-helix domain-containing protein complement(3329806..3330660) Clostridium beijerinckii NCIMB 8052 5294052 YP_001309964.1 CDS Cbei_2861 NC_009617.1 3331118 3332575 R KEGG: tte:TTE2242 transposase; transposase complement(3331118..3332575) Clostridium beijerinckii NCIMB 8052 5294053 YP_001309965.1 CDS Cbei_2862 NC_009617.1 3332746 3333888 D PFAM: alpha/beta hydrolase fold; Epoxide hydrolase domain protein; KEGG: bcl:ABC1387 epoxide hydrolase 1; epocide hydrolase domain-containing protein 3332746..3333888 Clostridium beijerinckii NCIMB 8052 5294054 YP_001309966.1 CDS Cbei_2863 NC_009617.1 3334083 3337169 R PFAM: acriflavin resistance protein; KEGG: dsy:DSY2068 hypothetical protein; acriflavin resistance protein complement(3334083..3337169) Clostridium beijerinckii NCIMB 8052 5294055 YP_001309967.1 CDS Cbei_2864 NC_009617.1 3337183 3338391 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cno:NT01CX_1548 HlyD family secretion protein; RND family efflux transporter MFP subunit complement(3337183..3338391) Clostridium beijerinckii NCIMB 8052 5294056 YP_001309968.1 CDS Cbei_2865 NC_009617.1 3338482 3339831 R KEGG: mcp:MCAP_0860 hypothetical protein; hypothetical protein complement(3338482..3339831) Clostridium beijerinckii NCIMB 8052 5294057 YP_001309969.1 CDS Cbei_2866 NC_009617.1 3340022 3340603 D PFAM: regulatory protein, TetR; KEGG: sha:SH0304 hypothetical protein; TetR family transcriptional regulator 3340022..3340603 Clostridium beijerinckii NCIMB 8052 5294058 YP_001309970.1 CDS Cbei_2867 NC_009617.1 3340942 3341889 R PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: cac:CAC3361 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3340942..3341889) Clostridium beijerinckii NCIMB 8052 5294059 YP_001309971.1 CDS Cbei_2868 NC_009617.1 3342283 3343953 R catalyzes the condensation of two pyruvates to form acetolactate, implicated in pH homeostasis via the acetoin-2,3-butanediol pathway or in valine biosynthesis; acetolactate synthase complement(3342283..3343953) Clostridium beijerinckii NCIMB 8052 5294060 YP_001309972.1 CDS Cbei_2870 NC_009617.1 3344614 3346188 R PFAM: binding-protein-dependent transport systems inner membrane component; Substrate-binding region of ABC-type glycine betaine transport system; KEGG: cac:CAC2849 proline/glycine betaine ABC-type transport system, permease component fused to periplasmic component; glycine/betaine ABC transporter substrate-binding protein complement(3344614..3346188) Clostridium beijerinckii NCIMB 8052 5296387 YP_001309973.1 CDS Cbei_2871 NC_009617.1 3346190 3347317 R TIGRFAM: glycine betaine/L-proline ABC transporter ATPase subunit; PFAM: CBS domain containing protein; ABC transporter; SMART: ATPase AAA; KEGG: cno:NT01CX_0629 glycine betaine/carnitine/choline transport ATP-binding protein; glycine/betaine ABC transporter ATPase complement(3346190..3347317) Clostridium beijerinckii NCIMB 8052 5294062 YP_001309974.1 CDS Cbei_2872 NC_009617.1 3347680 3348306 R PFAM: GntR family transcriptional regulator; TrkA-C domain protein; KEGG: efa:EF2640 transcriptional regulator, GntR family; TrkA domain-containing protein complement(3347680..3348306) Clostridium beijerinckii NCIMB 8052 5294063 YP_001309975.1 CDS Cbei_2873 NC_009617.1 3348525 3349460 R PFAM: polysaccharide deacetylase; KEGG: cpr:CPR_0810 polysaccharide deacetylase family protein; polysaccharide deacetylase complement(3348525..3349460) Clostridium beijerinckii NCIMB 8052 5294064 YP_001309976.1 CDS Cbei_2874 NC_009617.1 3350389 3351726 R KEGG: ayw:AYWB_353 hypothetical protein; hypothetical protein complement(3350389..3351726) Clostridium beijerinckii NCIMB 8052 5294065 YP_001309977.1 CDS Cbei_2875 NC_009617.1 3352623 3355748 R PFAM: acriflavin resistance protein; KEGG: cvi:CV3924 probable transmembrane drug efflux protein; acriflavin resistance protein complement(3352623..3355748) Clostridium beijerinckii NCIMB 8052 5294066 YP_001309978.1 CDS Cbei_2876 NC_009617.1 3355748 3356845 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dar:Daro_3760 secretion protein HlyD; RND family efflux transporter MFP subunit complement(3355748..3356845) Clostridium beijerinckii NCIMB 8052 5294067 YP_001309979.1 CDS Cbei_2877 NC_009617.1 3357007 3357570 D PFAM: regulatory protein, TetR; KEGG: blo:BL0061 possible TetR-type transcriptional regulator; TetR family transcriptional regulator 3357007..3357570 Clostridium beijerinckii NCIMB 8052 5294068 YP_001309980.1 CDS Cbei_2878 NC_009617.1 3357710 3358579 R KEGG: cac:CAC0757 predicted membrane protein; hypothetical protein complement(3357710..3358579) Clostridium beijerinckii NCIMB 8052 5294069 YP_001309981.1 CDS Cbei_2879 NC_009617.1 3359361 3360818 R KEGG: tte:TTE2242 transposase; transposase complement(3359361..3360818) Clostridium beijerinckii NCIMB 8052 5294070 YP_001309982.1 CDS Cbei_2880 NC_009617.1 3360990 3361880 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: bxe:Bxe_B0546 epimerase/dehydratase; NAD-dependent epimerase/dehydratase 3360990..3361880 Clostridium beijerinckii NCIMB 8052 5294071 YP_001309983.1 CDS Cbei_2881 NC_009617.1 3362003 3363112 R PFAM: aldo/keto reductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cac:CAC0767 Fe-S oxidoreductase; aldo/keto reductase complement(3362003..3363112) Clostridium beijerinckii NCIMB 8052 5294072 YP_001309984.1 CDS Cbei_2882 NC_009617.1 3363837 3364484 D PFAM: protein of unknown function DUF1121; KEGG: cth:Cthe_0762 protein of unknown function DUF1121; hypothetical protein 3363837..3364484 Clostridium beijerinckii NCIMB 8052 5294073 YP_001309985.1 CDS Cbei_2883 NC_009617.1 3365306 3366445 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: cpr:CPR_2286 butyryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(3365306..3366445) Clostridium beijerinckii NCIMB 8052 5294074 YP_001309986.1 CDS Cbei_2884 NC_009617.1 3366532 3367959 R PFAM: FAD linked oxidase domain protein; KEGG: fnu:FN1536 (S)-2-hydroxy-acid oxidase chain D; FAD linked oxidase domain-containing protein complement(3366532..3367959) Clostridium beijerinckii NCIMB 8052 5294075 YP_001309987.1 CDS Cbei_2885 NC_009617.1 3368164 3369627 R TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: cno:NT01CX_1609 L-lactate permease; L-lactate transport complement(3368164..3369627) Clostridium beijerinckii NCIMB 8052 5294076 YP_001309988.1 CDS Cbei_2886 NC_009617.1 3369998 3370936 R PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; Electron transfer flavoprotein, alpha subunit-like; KEGG: fnu:FN1533 electron transfer flavoprotein alpha-subunit; electron transfer flavoprotein subunit alpha-like protein complement(3369998..3370936) Clostridium beijerinckii NCIMB 8052 5294077 YP_001309989.1 CDS Cbei_2887 NC_009617.1 3370956 3371741 R PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; KEGG: fnu:FN1534 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha/beta-subunit-like protein complement(3370956..3371741) Clostridium beijerinckii NCIMB 8052 5294078 YP_001309990.1 CDS Cbei_2888 NC_009617.1 3372195 3372689 D PFAM: nitroreductase; KEGG: cac:CAC3483 nitroreductase fused to ferredoxin domain; nitroreductase 3372195..3372689 Clostridium beijerinckii NCIMB 8052 5294079 YP_001309991.1 CDS Cbei_2889 NC_009617.1 3372774 3374153 R PFAM: amino acid permease-associated region; KEGG: cac:CAC1472 amino acid permease; amino acid permease-associated protein complement(3372774..3374153) Clostridium beijerinckii NCIMB 8052 5294080 YP_001309992.1 CDS Cbei_2890 NC_009617.1 3374454 3375317 R PFAM: extracellular solute-binding protein, family 3; KEGG: vei:Veis_0187 extracellular solute-binding protein, family 3; extracellular solute-binding protein complement(3374454..3375317) Clostridium beijerinckii NCIMB 8052 5294081 YP_001309993.1 CDS Cbei_2891 NC_009617.1 3375520 3377547 R PFAM: glycoside hydrolase, family 31; KEGG: bha:BH2055 glycosyl hydrolase; glycoside hydrolase complement(3375520..3377547) Clostridium beijerinckii NCIMB 8052 5294082 YP_001309994.1 CDS Cbei_2892 NC_009617.1 3377681 3378526 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bld:BLi03542 similar to sugar permease; RBL01127; binding-protein-dependent transport system inner membrane protein complement(3377681..3378526) Clostridium beijerinckii NCIMB 8052 5294083 YP_001309995.1 CDS Cbei_2893 NC_009617.1 3378526 3379434 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bld:BLi03541 transporter; RBL01129; binding-protein-dependent transport system inner membrane protein complement(3378526..3379434) Clostridium beijerinckii NCIMB 8052 5294084 YP_001309996.1 CDS Cbei_2894 NC_009617.1 3379955 3381208 R PFAM: extracellular solute-binding protein, family 1; KEGG: bld:BLi03540 ABC transporter sugar binding protein; RBL01130; extracellular solute-binding protein complement(3379955..3381208) Clostridium beijerinckii NCIMB 8052 5294085 YP_001309997.1 CDS Cbei_2896 NC_009617.1 3381685 3383142 D KEGG: tte:TTE2242 transposase; transposase 3381685..3383142 Clostridium beijerinckii NCIMB 8052 5296388 YP_001309998.1 CDS Cbei_2897 NC_009617.1 3383308 3384699 R PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: cpr:CPR_2056 DNA-binding response regulator, AraC family; response regulator receiver protein complement(3383308..3384699) Clostridium beijerinckii NCIMB 8052 5294087 YP_001309999.1 CDS Cbei_2898 NC_009617.1 3384711 3386594 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase internal region; KEGG: tte:TTE2344 predicted ATPase; histidine kinase internal region complement(3384711..3386594) Clostridium beijerinckii NCIMB 8052 5294088 YP_001310000.1 CDS Cbei_2899 NC_009617.1 3387158 3387631 R PFAM: thioesterase superfamily protein; KEGG: tte:TTE1843 uncharacterized protein, possibly involved in aromatic compounds catabolism; thioesterase superfamily protein complement(3387158..3387631) Clostridium beijerinckii NCIMB 8052 5294089 YP_001310001.1 CDS Cbei_2900 NC_009617.1 3387932 3389035 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: tte:TTE1081 diguanylate cyclase/phosphodiesterase domain 2 (EAL); diguanylate cyclase 3387932..3389035 Clostridium beijerinckii NCIMB 8052 5294090 YP_001310002.1 CDS Cbei_2901 NC_009617.1 3389129 3390736 R PFAM: phosphotransferase system PTS, sorbose-specific IIC subunit; PTS system mannose/fructose/sorbose family IID component; KEGG: eca:ECA2387 PTS system, mannose-specific iid component; PTS system mannose/fructose/sorbose family transporter subunit IID complement(3389129..3390736) Clostridium beijerinckii NCIMB 8052 5294091 YP_001310003.1 CDS Cbei_2902 NC_009617.1 3390739 3391221 R PFAM: PTS system sorbose subfamily IIB component; KEGG: bpn:BPEN_459 PTS family enzyme IIA/enzyme IIB, mannose-specific; PTS system sorbose subfamily transporter subunit IIB complement(3390739..3391221) Clostridium beijerinckii NCIMB 8052 5294092 YP_001310004.1 CDS Cbei_2903 NC_009617.1 3391240 3391641 R PFAM: PTS system fructose subfamily IIA component; KEGG: lpl:lp_0586 mannose PTS, EIIA; PTS system fructose subfamily transporter subunit IIA complement(3391240..3391641) Clostridium beijerinckii NCIMB 8052 5294093 YP_001310005.1 CDS Cbei_2904 NC_009617.1 3391671 3392843 R KEGG: cno:NT01CX_0292 predicted phosphosugar isomerase; phosphosugar isomerase complement(3391671..3392843) Clostridium beijerinckii NCIMB 8052 5294094 YP_001310006.1 CDS Cbei_2905 NC_009617.1 3392961 3393404 R PFAM: PTS system fructose subfamily IIA component; KEGG: ppe:PEPE_0174 phosphotransferase system, mannose/fructose-specific component IIA; PTS system fructose subfamily transporter subunit IIA complement(3392961..3393404) Clostridium beijerinckii NCIMB 8052 5294095 YP_001310007.1 CDS Cbei_2906 NC_009617.1 3393404 3394207 R catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N-acetylgalactosamine transport; PTS system N-acetylgalactosamine-specific transporter subunit IID complement(3393404..3394207) Clostridium beijerinckii NCIMB 8052 5294096 YP_001310008.1 CDS Cbei_2907 NC_009617.1 3394191 3394991 R catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane;protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; involved in N-acetylgalactosamine transport; PTS system N-acetylgalactosamine-specific transporter subunit IIC complement(3394191..3394991) Clostridium beijerinckii NCIMB 8052 5294097 YP_001310009.1 CDS Cbei_2908 NC_009617.1 3395006 3395521 R catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; involved in N-acetylgalactosamine transport; PTS system N-acetylgalactosamine-specific transporter subunit IIB complement(3395006..3395521) Clostridium beijerinckii NCIMB 8052 5294098 YP_001310010.1 CDS Cbei_2911 NC_009617.1 3404858 3405283 R PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY1415 hypothetical protein; N-acetyltransferase GCN5 complement(3404858..3405283) Clostridium beijerinckii NCIMB 8052 5296395 YP_001310011.1 CDS Cbei_2912 NC_009617.1 3405749 3407752 R PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: cac:CAC2547 possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain; methyl-accepting chemotaxis sensory transducer complement(3405749..3407752) Clostridium beijerinckii NCIMB 8052 5294101 YP_001310012.1 CDS Cbei_2913 NC_009617.1 3408389 3410407 D TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: lin:lin0795 similar to Na+/H+ antiporter; Na+/H+ antiporter 3408389..3410407 Clostridium beijerinckii NCIMB 8052 5294102 YP_001310013.1 CDS Cbei_2914 NC_009617.1 3410661 3411713 D KEGG: cpr:CPR_1341 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein 3410661..3411713 Clostridium beijerinckii NCIMB 8052 5294103 YP_001310014.1 CDS Cbei_2915 NC_009617.1 3412011 3412739 R PFAM: MORN repeat-containing protein; KEGG: bfs:BF2279 hypothetical protein; MORN repeat-containing protein complement(3412011..3412739) Clostridium beijerinckii NCIMB 8052 5294104 YP_001310015.1 CDS Cbei_2916 NC_009617.1 3413251 3414846 D PFAM: NHL repeat containing protein; KEGG: mba:Mbar_A3620 surface layer protein; NHL repeat-containing protein 3413251..3414846 Clostridium beijerinckii NCIMB 8052 5294105 YP_001310016.1 CDS Cbei_2917 NC_009617.1 3415087 3418179 R PFAM: acriflavin resistance protein; KEGG: gme:Gmet_2518 acriflavin resistance protein; acriflavin resistance protein complement(3415087..3418179) Clostridium beijerinckii NCIMB 8052 5294106 YP_001310017.1 CDS Cbei_2918 NC_009617.1 3418192 3419454 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aba:Acid345_0308 secretion protein HlyD; RND family efflux transporter MFP subunit complement(3418192..3419454) Clostridium beijerinckii NCIMB 8052 5294107 YP_001310018.1 CDS Cbei_2919 NC_009617.1 3420139 3420837 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: chy:CHY_0092 DNA-binding response regulator; two component transcriptional regulator complement(3420139..3420837) Clostridium beijerinckii NCIMB 8052 5294108 YP_001310019.1 CDS Cbei_2920 NC_009617.1 3421012 3422466 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cac:CAC0317 sensory transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(3421012..3422466) Clostridium beijerinckii NCIMB 8052 5294109 YP_001310020.1 CDS Cbei_2921 NC_009617.1 3422940 3424484 R TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: chy:CHY_1864 drug resistance transporter EmrB/QacA family; EmrB/QacA family drug resistance transporter complement(3422940..3424484) Clostridium beijerinckii NCIMB 8052 5294110 YP_001310021.1 CDS Cbei_2922 NC_009617.1 3424493 3425146 R KEGG: mta:Moth_2323 secretion protein HlyD; secretion protein HlyD complement(3424493..3425146) Clostridium beijerinckii NCIMB 8052 5294111 YP_001310022.1 CDS Cbei_2923 NC_009617.1 3425162 3426148 R PFAM: secretion protein HlyD family protein; KEGG: mta:Moth_2322 secretion protein HlyD; secretion protein HlyD family protein complement(3425162..3426148) Clostridium beijerinckii NCIMB 8052 5294112 YP_001310023.1 CDS Cbei_2924 NC_009617.1 3426177 3426383 R KEGG: cac:CAC3518 transcriptional regulators, AcrR family; AcrR family transcriptional regulator complement(3426177..3426383) Clostridium beijerinckii NCIMB 8052 5294113 YP_001310024.1 CDS Cbei_2925 NC_009617.1 3426732 3428306 R PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cac:CAC3010 ATP-dependent RNA helicase (superfamily II), YDBR B.subtilis ortholog; DEAD/DEAH box helicase complement(3426732..3428306) Clostridium beijerinckii NCIMB 8052 5294114 YP_001310025.1 CDS Cbei_2926 NC_009617.1 3428432 3428623 R PFAM: Cold-shock protein, DNA-binding; Ribonuclease B, OB region N-terminal domain; SMART: Cold shock protein; KEGG: cno:NT01CX_0617 cold shock protein CspB; cold-shock DNA-binding domain-containing protein complement(3428432..3428623) Clostridium beijerinckii NCIMB 8052 5294115 YP_001310026.1 CDS Cbei_2927 NC_009617.1 3429234 3429932 R PFAM: GntR family transcriptional regulator; GntR domain protein; KEGG: cpe:CPE0309 probable transcriptional regulator; GntR family transcriptional regulator complement(3429234..3429932) Clostridium beijerinckii NCIMB 8052 5294116 YP_001310027.1 CDS Cbei_2928 NC_009617.1 3430360 3433401 R PFAM: acriflavin resistance protein; KEGG: dsy:DSY2068 hypothetical protein; acriflavin resistance protein complement(3430360..3433401) Clostridium beijerinckii NCIMB 8052 5294117 YP_001310028.1 CDS Cbei_2929 NC_009617.1 3433415 3434620 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cno:NT01CX_1548 HlyD family secretion protein; RND family efflux transporter MFP subunit complement(3433415..3434620) Clostridium beijerinckii NCIMB 8052 5294118 YP_001310029.1 CDS Cbei_2930 NC_009617.1 3434680 3436005 R KEGG: ayw:AYWB_353 hypothetical protein; hypothetical protein complement(3434680..3436005) Clostridium beijerinckii NCIMB 8052 5294119 YP_001310030.1 CDS Cbei_2931 NC_009617.1 3436208 3436801 D PFAM: regulatory protein, TetR; KEGG: sha:SH0304 hypothetical protein; TetR family transcriptional regulator 3436208..3436801 Clostridium beijerinckii NCIMB 8052 5294120 YP_001310031.1 CDS nhaA NC_009617.1 3437743 3438957 R exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter complement(3437743..3438957) Clostridium beijerinckii NCIMB 8052 5294121 YP_001310032.1 CDS Cbei_2933 NC_009617.1 3439204 3439821 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dra:DR0605 GGDEF family protein; diguanylate cyclase complement(3439204..3439821) Clostridium beijerinckii NCIMB 8052 5294122 YP_001310033.1 CDS Cbei_2934 NC_009617.1 3440402 3441262 D PFAM: dihydrodipicolinate reductase; KEGG: cth:Cthe_1170 dihydrodipicolinate reductase; dihydrodipicolinate reductase 3440402..3441262 Clostridium beijerinckii NCIMB 8052 5294123 YP_001310034.1 CDS Cbei_2936 NC_009617.1 3441508 3442362 D PFAM: GCN5-related N-acetyltransferase; KEGG: mba:Mbar_A0671 acetyltransferase (GNAT) family protein; N-acetyltransferase GCN5 3441508..3442362 Clostridium beijerinckii NCIMB 8052 5296396 YP_001310035.1 CDS Cbei_2937 NC_009617.1 3442610 3444190 D PFAM: TrkA-C domain protein; Chloride channel, core; KEGG: cno:NT01CX_0195 voltage gated chloride channel family protein; chloride channel protein 3442610..3444190 Clostridium beijerinckii NCIMB 8052 5294125 YP_001310036.1 CDS Cbei_2938 NC_009617.1 3444460 3444615 D hypothetical protein 3444460..3444615 Clostridium beijerinckii NCIMB 8052 5294126 YP_001310037.1 CDS Cbei_2939 NC_009617.1 3444637 3444960 D hypothetical protein 3444637..3444960 Clostridium beijerinckii NCIMB 8052 5294127 YP_001310038.1 CDS Cbei_2940 NC_009617.1 3445252 3446043 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bte:BTH_I2387 oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 3445252..3446043 Clostridium beijerinckii NCIMB 8052 5294128 YP_001310039.1 CDS Cbei_2942 NC_009617.1 3446457 3447185 D PFAM: protein of unknown function DUF421; KEGG: cac:CAC1521 uncharacterized membrane protein, YetF/YdfS/YkjA/YrbG/YdfR B.subtilis ortholog; hypothetical protein 3446457..3447185 Clostridium beijerinckii NCIMB 8052 5296397 YP_001310040.1 CDS Cbei_2943 NC_009617.1 3447200 3447565 D KEGG: dsy:DSY1539 hypothetical protein; hypothetical protein 3447200..3447565 Clostridium beijerinckii NCIMB 8052 5294130 YP_001310041.1 CDS Cbei_2944 NC_009617.1 3447626 3447988 R PFAM: Domain of unknown function DUF1791; KEGG: chy:CHY_1266 hypothetical protein; hypothetical protein complement(3447626..3447988) Clostridium beijerinckii NCIMB 8052 5294131 YP_001310042.1 CDS Cbei_2945 NC_009617.1 3448178 3450664 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SirA family protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SMART: Rhodanese domain protein; KEGG: bth:BT_2434 pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(3448178..3450664) Clostridium beijerinckii NCIMB 8052 5294132 YP_001310043.1 CDS Cbei_2946 NC_009617.1 3451485 3452861 D KEGG: cpr:CPR_0627 hypothetical protein; hypothetical protein 3451485..3452861 Clostridium beijerinckii NCIMB 8052 5294133 YP_001310044.1 CDS Cbei_2947 NC_009617.1 3453070 3455337 R PFAM: UvrD/REP helicase; KEGG: cpr:CPR_1591 ATP-dependent DNA helicase, UvrD/REP family; UvrD/REP helicase complement(3453070..3455337) Clostridium beijerinckii NCIMB 8052 5294134 YP_001310045.1 CDS Cbei_2948 NC_009617.1 3455756 3456301 R PFAM: membrane-bound metal-dependent hydrolase; KEGG: cac:CAC0114 predicted membrane protein; membrane-bound metal-dependent hydrolase complement(3455756..3456301) Clostridium beijerinckii NCIMB 8052 5294135 YP_001310046.1 CDS Cbei_2949 NC_009617.1 3456540 3457013 R KEGG: cac:CAC2615 uncharacterized conserved protein, CotF B.subtilis family; hypothetical protein complement(3456540..3457013) Clostridium beijerinckii NCIMB 8052 5294136 YP_001310047.1 CDS Cbei_2950 NC_009617.1 3457132 3458547 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cth:Cthe_1846 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(3457132..3458547) Clostridium beijerinckii NCIMB 8052 5294137 YP_001310048.1 CDS Cbei_2951 NC_009617.1 3458544 3459260 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: tte:TTE2474 response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain; two component transcriptional regulator complement(3458544..3459260) Clostridium beijerinckii NCIMB 8052 5294138 YP_001310049.1 CDS Cbei_2952 NC_009617.1 3459374 3459628 R hypothetical protein complement(3459374..3459628) Clostridium beijerinckii NCIMB 8052 5294139 YP_001310050.1 CDS Cbei_2953 NC_009617.1 3459828 3461936 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY4989 hypothetical protein; methyl-accepting chemotaxis sensory transducer complement(3459828..3461936) Clostridium beijerinckii NCIMB 8052 5294140 YP_001310051.1 CDS Cbei_2954 NC_009617.1 3462142 3462729 R PFAM: Cupin 2, conserved barrel domain protein; KEGG: cno:NT01CX_2395 hypothetical protein; cupin complement(3462142..3462729) Clostridium beijerinckii NCIMB 8052 5294141 YP_001310052.1 CDS Cbei_2955 NC_009617.1 3462972 3463268 D KEGG: ddi:DDBDRAFT_0190180 hypothetical protein; hypothetical protein 3462972..3463268 Clostridium beijerinckii NCIMB 8052 5294142 YP_001310053.1 CDS Cbei_2956 NC_009617.1 3463289 3463447 R KEGG: cac:CAC2416 uncharacterized protein, ErfK family; contains peptidoglycan-binding domain; peptidoglycan-binding domain-containing protein complement(3463289..3463447) Clostridium beijerinckii NCIMB 8052 5294143 YP_001310054.1 CDS Cbei_2957 NC_009617.1 3463781 3464677 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: aha:AHA_3960 cation efflux family protein; cation diffusion facilitator family transporter 3463781..3464677 Clostridium beijerinckii NCIMB 8052 5294144 YP_001310055.1 CDS Cbei_2958 NC_009617.1 3464871 3465188 R TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: cno:NT01CX_1158 thioredoxin; thioredoxin complement(3464871..3465188) Clostridium beijerinckii NCIMB 8052 5294145 YP_001310056.1 CDS Cbei_2959 NC_009617.1 3465334 3465936 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: dsy:DSY1195 hypothetical protein; alkyl hydroperoxide reductase complement(3465334..3465936) Clostridium beijerinckii NCIMB 8052 5294146 YP_001310057.1 CDS Cbei_2960 NC_009617.1 3465946 3466623 R PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: dsy:DSY1196 probable cytochrome c biogenesis protein CcdA; cytochrome C biogenesis transmembrane protein complement(3465946..3466623) Clostridium beijerinckii NCIMB 8052 5294147 YP_001310058.1 CDS Cbei_2961 NC_009617.1 3466925 3467281 D PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dsy:DSY0274 hypothetical protein; dinitrogenase iron-molybdenum cofactor biosynthesis protein 3466925..3467281 Clostridium beijerinckii NCIMB 8052 5294148 YP_001310059.1 CDS Cbei_2962 NC_009617.1 3467370 3467816 R PFAM: protein of unknown function DUF134; KEGG: ctc:CTC01373 DNA-binding protein; hypothetical protein complement(3467370..3467816) Clostridium beijerinckii NCIMB 8052 5294149 YP_001310060.1 CDS Cbei_2963 NC_009617.1 3468150 3468854 R TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mta:Moth_1280 ubiquinone/menaquinone biosynthesis methyltransferases; ubiquinone/menaquinone biosynthesis methyltransferase complement(3468150..3468854) Clostridium beijerinckii NCIMB 8052 5294150 YP_001310061.1 CDS Cbei_2964 NC_009617.1 3468971 3469597 R PFAM: Abortive infection protein; KEGG: lip:LI0758 hypothetical protein; abortive infection protein complement(3468971..3469597) Clostridium beijerinckii NCIMB 8052 5294151 YP_001310062.1 CDS Cbei_2965 NC_009617.1 3469613 3470512 R TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: tma:TM1528 1,4-dihydroxy-2-naphthoate octaprenyltransferase; 1,4-dihydroxy-2-naphthoate octaprenyltransferase complement(3469613..3470512) Clostridium beijerinckii NCIMB 8052 5294152 YP_001310063.1 CDS Cbei_2966 NC_009617.1 3470639 3472030 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: dsy:DSY1372 hypothetical protein; 4Fe-4S ferredoxin complement(3470639..3472030) Clostridium beijerinckii NCIMB 8052 5294153 YP_001310064.1 CDS Cbei_2967 NC_009617.1 3472057 3472596 R hypothetical protein complement(3472057..3472596) Clostridium beijerinckii NCIMB 8052 5294154 YP_001310065.1 CDS Cbei_2968 NC_009617.1 3472674 3473168 R PFAM: DoxX family protein; KEGG: rxy:Rxyl_3069 DoxX; DoxX family protein complement(3472674..3473168) Clostridium beijerinckii NCIMB 8052 5294155 YP_001310066.1 CDS Cbei_2969 NC_009617.1 3473210 3474037 R PFAM: Polyprenyl synthetase; KEGG: swo:Swol_0680 trans-hexaprenyltranstransferase; polyprenyl synthetase complement(3473210..3474037) Clostridium beijerinckii NCIMB 8052 5294156 YP_001310067.1 CDS Cbei_2970 NC_009617.1 3474357 3475190 R PFAM: prolipoprotein diacylglyceryl transferase; KEGG: mta:Moth_1993 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase complement(3474357..3475190) Clostridium beijerinckii NCIMB 8052 5294157 YP_001310068.1 CDS Cbei_2971 NC_009617.1 3475443 3476546 R PFAM: NLP/P60 protein; KEGG: ctc:CTC00227 cell wall-associated hydrolase; NLP/P60 protein complement(3475443..3476546) Clostridium beijerinckii NCIMB 8052 5294158 YP_001310069.1 CDS Cbei_2972 NC_009617.1 3476778 3477464 D TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ctc:CTC02510 cell division ATP-binding protein ftsE; cell division ATP-binding protein FtsE 3476778..3477464 Clostridium beijerinckii NCIMB 8052 5294159 YP_001310070.1 CDS Cbei_2973 NC_009617.1 3477454 3478347 D PFAM: protein of unknown function DUF214; KEGG: ctc:CTC02509 cell division protein ftsX; hypothetical protein 3477454..3478347 Clostridium beijerinckii NCIMB 8052 5294160 YP_001310071.1 CDS Cbei_2975 NC_009617.1 3478841 3480553 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01211 methyl-accepting chemotaxis protein TlpA; methyl-accepting chemotaxis sensory transducer complement(3478841..3480553) Clostridium beijerinckii NCIMB 8052 5296398 YP_001310072.1 CDS Cbei_2976 NC_009617.1 3480954 3481658 D PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: ctc:CTC00145 cytochrome c-type biogenesis protein ccdA; cytochrome C biogenesis transmembrane protein 3480954..3481658 Clostridium beijerinckii NCIMB 8052 5294162 YP_001310073.1 CDS Cbei_2977 NC_009617.1 3481677 3482258 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: tte:TTE1026 thiol-disulfide isomerase and thioredoxins; alkyl hydroperoxide reductase 3481677..3482258 Clostridium beijerinckii NCIMB 8052 5294163 YP_001310074.1 CDS Cbei_2978 NC_009617.1 3482314 3482883 R PFAM: SNARE associated Golgi protein; KEGG: cpe:CPE1564 hypothetical protein; hypothetical protein complement(3482314..3482883) Clostridium beijerinckii NCIMB 8052 5294164 YP_001310075.1 CDS Cbei_2979 NC_009617.1 3483109 3483318 R hypothetical protein complement(3483109..3483318) Clostridium beijerinckii NCIMB 8052 5294165 YP_001310076.1 CDS Cbei_2980 NC_009617.1 3483657 3484562 D PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG: mxa:MXAN_3425 multicopper oxidase domain protein; multicopper oxidase, type 3 3483657..3484562 Clostridium beijerinckii NCIMB 8052 5294166 YP_001310077.1 CDS Cbei_2981 NC_009617.1 3484687 3484968 R hypothetical protein complement(3484687..3484968) Clostridium beijerinckii NCIMB 8052 5294167 YP_001310078.1 CDS Cbei_2982 NC_009617.1 3484999 3485229 R hypothetical protein complement(3484999..3485229) Clostridium beijerinckii NCIMB 8052 5294168 YP_001310079.1 CDS Cbei_2984 NC_009617.1 3486194 3487567 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cac:CAC1553 membrane associated sensory transduction histidine kinase (with HAMP domain); integral membrane sensor signal transduction histidine kinase complement(3486194..3487567) Clostridium beijerinckii NCIMB 8052 5296399 YP_001310080.1 CDS Cbei_2985 NC_009617.1 3487564 3488247 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cac:CAC1552 response regulator (CheY-like receiver domain and HTH DNA-binding domain); two component transcriptional regulator complement(3487564..3488247) Clostridium beijerinckii NCIMB 8052 5294170 YP_001310081.1 CDS Cbei_2986 NC_009617.1 3488619 3490037 R TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: mta:Moth_0987 proton-translocating NADH-quinone oxidoreductase, chain N; proton-translocating NADH-quinone oxidoreductase subunit N complement(3488619..3490037) Clostridium beijerinckii NCIMB 8052 5294171 YP_001310082.1 CDS Cbei_2987 NC_009617.1 3490040 3491563 R TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: mta:Moth_0986 proton-translocating NADH-quinone oxidoreductase, chain M; proton-translocating NADH-quinone oxidoreductase subunit M complement(3490040..3491563) Clostridium beijerinckii NCIMB 8052 5294172 YP_001310083.1 CDS Cbei_2988 NC_009617.1 3491564 3493417 R TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); KEGG: mta:Moth_0985 proton-translocating NADH-quinone oxidoreductase, chain L; proton-translocating NADH-quinone oxidoreductase subunit L complement(3491564..3493417) Clostridium beijerinckii NCIMB 8052 5294173 YP_001310084.1 CDS Cbei_2989 NC_009617.1 3493426 3493734 R PFAM: NADH-ubiquinone oxidoreductase, chain 4L; KEGG: mta:Moth_0984 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase subunit 4L complement(3493426..3493734) Clostridium beijerinckii NCIMB 8052 5294174 YP_001310085.1 CDS Cbei_2990 NC_009617.1 3493735 3494226 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: mta:Moth_0983 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 complement(3493735..3494226) Clostridium beijerinckii NCIMB 8052 5294175 YP_001310086.1 CDS Cbei_2991 NC_009617.1 3494316 3494705 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: chy:CHY_1420 proton-translocating NADH-quinone oxidoreductase, I subunit; 4Fe-4S ferredoxin complement(3494316..3494705) Clostridium beijerinckii NCIMB 8052 5294176 YP_001310087.1 CDS Cbei_2992 NC_009617.1 3494878 3495912 R PFAM: respiratory-chain NADH dehydrogenase, subunit 1; KEGG: mta:Moth_0981 respiratory-chain NADH dehydrogenase, subunit 1; NADH dehydrogenase (quinone) complement(3494878..3495912) Clostridium beijerinckii NCIMB 8052 5294177 YP_001310088.1 CDS Cbei_2993 NC_009617.1 3495926 3497038 R catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit D complement(3495926..3497038) Clostridium beijerinckii NCIMB 8052 5294178 YP_001310089.1 CDS Cbei_2994 NC_009617.1 3497057 3497494 R PFAM: NADH dehydrogenase (ubiquinone), 30 kDa subunit; KEGG: mta:Moth_0979 NADH (or F420H2) dehydrogenase, subunit C; NADH dehydrogenase (ubiquinone), 30 kDa subunit complement(3497057..3497494) Clostridium beijerinckii NCIMB 8052 5294179 YP_001310090.1 CDS Cbei_2995 NC_009617.1 3497487 3497996 R The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B complement(3497487..3497996) Clostridium beijerinckii NCIMB 8052 5294180 YP_001310091.1 CDS Cbei_2996 NC_009617.1 3497987 3498343 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; KEGG: mta:Moth_0977 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 complement(3497987..3498343) Clostridium beijerinckii NCIMB 8052 5294181 YP_001310092.1 CDS Cbei_2997 NC_009617.1 3498896 3499102 R hypothetical protein complement(3498896..3499102) Clostridium beijerinckii NCIMB 8052 5294182 YP_001310093.1 CDS Cbei_2998 NC_009617.1 3499171 3499614 R hypothetical protein complement(3499171..3499614) Clostridium beijerinckii NCIMB 8052 5294183 YP_001310094.1 CDS Cbei_2999 NC_009617.1 3499843 3500730 R PFAM: UbiA prenyltransferase; KEGG: ssp:SSP1750 14-dihydroxy-2-naphthodate octaprenyltransferase; UbiA prenyltransferase complement(3499843..3500730) Clostridium beijerinckii NCIMB 8052 5294184 YP_001310095.1 CDS Cbei_3000 NC_009617.1 3501229 3502929 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rhodanese domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: cno:NT01CX_0308 pyridine nucleotide-disulphide oxidoreductase family protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(3501229..3502929) Clostridium beijerinckii NCIMB 8052 5294185 YP_001310096.1 CDS Cbei_3001 NC_009617.1 3503267 3504133 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: mst:Msp_0703 dissimilatory sulfite reductase; nitrite and sulfite reductase 4Fe-4S subunit complement(3503267..3504133) Clostridium beijerinckii NCIMB 8052 5294186 YP_001310097.1 CDS Cbei_3002 NC_009617.1 3504255 3505073 R PFAM: protein of unknown function DUF81; KEGG: chy:CHY_2470 hypothetical protein; hypothetical protein complement(3504255..3505073) Clostridium beijerinckii NCIMB 8052 5294187 YP_001310098.1 CDS Cbei_3003 NC_009617.1 3505245 3505901 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cno:NT01CX_0639 conserved protein, ferredoxin-related; 4Fe-4S ferredoxin complement(3505245..3505901) Clostridium beijerinckii NCIMB 8052 5294188 YP_001310099.1 CDS Cbei_3004 NC_009617.1 3506314 3507096 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(3506314..3507096) Clostridium beijerinckii NCIMB 8052 5294189 YP_001310100.1 CDS Cbei_3005 NC_009617.1 3507101 3508249 R PFAM: ROK family protein; KEGG: dsy:DSY2954 hypothetical protein; ROK family protein complement(3507101..3508249) Clostridium beijerinckii NCIMB 8052 5294190 YP_001310101.1 CDS Cbei_3006 NC_009617.1 3508416 3509417 R TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: cac:CAC0809 hydrogenase formation factor (hypE); hydrogenase expression/formation protein HypE complement(3508416..3509417) Clostridium beijerinckii NCIMB 8052 5294191 YP_001310102.1 CDS Cbei_3007 NC_009617.1 3509418 3510497 R PFAM: hydrogenase formation HypD protein; KEGG: tte:TTE0133 Hydrogenase maturation factor; hydrogenase formation HypD protein complement(3509418..3510497) Clostridium beijerinckii NCIMB 8052 5294192 YP_001310103.1 CDS Cbei_3008 NC_009617.1 3510494 3510721 R TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: dsy:DSY2476 hydrogenase expression/formation protein HypC; hydrogenase assembly chaperone HypC/HupF complement(3510494..3510721) Clostridium beijerinckii NCIMB 8052 5294193 YP_001310104.1 CDS Cbei_3009 NC_009617.1 3510881 3513181 R TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC, N-terminal domain; zinc finger, HypF domain protein; KEGG: cac:CAC0810 hydrogenase maturation factor (hypF); (NiFe) hydrogenase maturation protein HypF complement(3510881..3513181) Clostridium beijerinckii NCIMB 8052 5294194 YP_001310105.1 CDS Cbei_3010 NC_009617.1 3513233 3513487 R KEGG: cac:CA_P0145 hypothetical protein, CF-29 family; hypothetical protein complement(3513233..3513487) Clostridium beijerinckii NCIMB 8052 5294195 YP_001310106.1 CDS Cbei_3011 NC_009617.1 3513504 3513977 R TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52, hydrogen uptake protein; KEGG: cac:CA_P0143 hydrogenase maturation protease delta subunit, HyaD-like; hydrogenase maturation protease complement(3513504..3513977) Clostridium beijerinckii NCIMB 8052 5294196 YP_001310107.1 CDS Cbei_3012 NC_009617.1 3514299 3515690 R PFAM: nickel-dependent hydrogenase, large subunit; KEGG: cac:CA_P0142 hydrogenase large chain; nickel-dependent hydrogenase, large subunit complement(3514299..3515690) Clostridium beijerinckii NCIMB 8052 5294197 YP_001310108.1 CDS Cbei_3013 NC_009617.1 3515699 3516574 R TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein; KEGG: cac:CA_P0141 hydrogenase small chain; hydrogenase (NiFe) small subunit HydA complement(3515699..3516574) Clostridium beijerinckii NCIMB 8052 5294198 YP_001310109.1 CDS Cbei_3014 NC_009617.1 3517021 3518667 D catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 3517021..3518667 Clostridium beijerinckii NCIMB 8052 5294199 YP_001310110.1 CDS Cbei_3015 NC_009617.1 3518783 3519199 R TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: cac:CAC0587 flavodoxin; flavodoxin complement(3518783..3519199) Clostridium beijerinckii NCIMB 8052 5294200 YP_001310111.1 CDS Cbei_3016 NC_009617.1 3519391 3520104 R PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: ctc:CTC01876 transcriptional regulatory protein; Crp/Fnr family transcriptional regulator complement(3519391..3520104) Clostridium beijerinckii NCIMB 8052 5294201 YP_001310112.1 CDS Cbei_3017 NC_009617.1 3520375 3521607 D PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: ctc:CTC01875 flavodoxin; beta-lactamase domain-containing protein 3520375..3521607 Clostridium beijerinckii NCIMB 8052 5294202 YP_001310113.1 CDS Cbei_3018 NC_009617.1 3521804 3522994 R PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: ppd:Ppro_3699 beta-lactamase domain protein; beta-lactamase domain-containing protein complement(3521804..3522994) Clostridium beijerinckii NCIMB 8052 5294203 YP_001310114.1 CDS Cbei_3019 NC_009617.1 3523235 3524458 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: chy:CHY_2596 nitrate reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(3523235..3524458) Clostridium beijerinckii NCIMB 8052 5294204 YP_001310115.1 CDS Cbei_3020 NC_009617.1 3524784 3526712 D TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane; KEGG: cac:CAC2498 carbon monoxide dehydrogenase, catalytic subunit (cooS); carbon-monoxide dehydrogenase, catalytic subunit 3524784..3526712 Clostridium beijerinckii NCIMB 8052 5294205 YP_001310116.1 CDS Cbei_3021 NC_009617.1 3526913 3527242 R hypothetical protein complement(3526913..3527242) Clostridium beijerinckii NCIMB 8052 5294206 YP_001310117.1 CDS Cbei_3022 NC_009617.1 3527480 3528427 R PFAM: chemotaxis sensory transducer; KEGG: btl:BALH_0624 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(3527480..3528427) Clostridium beijerinckii NCIMB 8052 5294207 YP_001310118.1 CDS Cbei_3023 NC_009617.1 3528894 3529439 D KEGG: ssa:SSA_0505 conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family; hypothetical protein 3528894..3529439 Clostridium beijerinckii NCIMB 8052 5294208 YP_001310119.1 CDS Cbei_3024 NC_009617.1 3529457 3531046 D PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: bca:BCE_1547 nitrite reductase; sulfite reductase (ferredoxin) 3529457..3531046 Clostridium beijerinckii NCIMB 8052 5294209 YP_001310120.1 CDS Cbei_3025 NC_009617.1 3531109 3531864 R KEGG: cph:Cpha266_1424 nitroreductase; nitroreductase complement(3531109..3531864) Clostridium beijerinckii NCIMB 8052 5294210 YP_001310121.1 CDS Cbei_3026 NC_009617.1 3532148 3532516 R PFAM: Heavy metal transport/detoxification protein; KEGG: mpt:Mpe_A1640 P1 ATPase/HMA domain; heavy metal transport/detoxification protein complement(3532148..3532516) Clostridium beijerinckii NCIMB 8052 5294211 YP_001310122.1 CDS Cbei_3027 NC_009617.1 3532869 3533396 D PFAM: transcriptional regulator PadR family protein; KEGG: lbr:LVIS_1807 predicted transcriptional regulator; PadR-like family transcriptional regulator 3532869..3533396 Clostridium beijerinckii NCIMB 8052 5294212 YP_001310123.1 CDS Cbei_3028 NC_009617.1 3533402 3534766 D PFAM: major facilitator superfamily MFS_1; KEGG: mlo:mll1728 probable transporter; major facilitator superfamily transporter 3533402..3534766 Clostridium beijerinckii NCIMB 8052 5294213 YP_001310124.1 CDS Cbei_3029 NC_009617.1 3534991 3535341 R hypothetical protein complement(3534991..3535341) Clostridium beijerinckii NCIMB 8052 5294214 YP_001310125.1 CDS Cbei_3030 NC_009617.1 3535472 3536818 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dsy:DSY0083 hypothetical protein; radical SAM domain-containing protein complement(3535472..3536818) Clostridium beijerinckii NCIMB 8052 5294215 YP_001310126.1 CDS Cbei_3031 NC_009617.1 3537037 3537252 R SMART: helix-turn-helix domain protein; KEGG: bld:BLi01580 YozG; XRE family transcriptional regulator complement(3537037..3537252) Clostridium beijerinckii NCIMB 8052 5294216 YP_001310127.1 CDS Cbei_3032 NC_009617.1 3537309 3537785 R KEGG: cac:CAC2553 uncharacterized mebrane protein, YOAS B.subtilis ortholog; hypothetical protein complement(3537309..3537785) Clostridium beijerinckii NCIMB 8052 5294217 YP_001310128.1 CDS Cbei_3033 NC_009617.1 3537935 3538636 R KEGG: lbr:LVIS_0656 hypothetical protein; hypothetical protein complement(3537935..3538636) Clostridium beijerinckii NCIMB 8052 5294218 YP_001310129.1 CDS Cbei_3034 NC_009617.1 3538636 3539091 R PFAM: LytTr DNA-binding region; KEGG: ssa:SSA_1982 transcriptional regulator, LytR/AlgR family; response regulator receiver protein complement(3538636..3539091) Clostridium beijerinckii NCIMB 8052 5294219 YP_001310130.1 CDS Cbei_3035 NC_009617.1 3539357 3539821 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mac:MA0616 2-cys peroxiredoxin, subunit A; alkyl hydroperoxide reductase 3539357..3539821 Clostridium beijerinckii NCIMB 8052 5294220 YP_001310131.1 CDS Cbei_3036 NC_009617.1 3540022 3540699 R PFAM: cell wall binding repeat-containing protein; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; cell wall binding repeat-containing protein complement(3540022..3540699) Clostridium beijerinckii NCIMB 8052 5294221 YP_001310132.1 CDS Cbei_3037 NC_009617.1 3540988 3542871 R KEGG: ctc:CTC02461 cell division protein ftsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA, central domain protein; peptidase M41, FtsH extracellular; SMART: ATPase AAA; ATP-dependent metalloprotease FtsH complement(3540988..3542871) Clostridium beijerinckii NCIMB 8052 5294222 YP_001310133.1 CDS Cbei_3038 NC_009617.1 3542965 3543648 R PFAM: peptidase, membrane zinc metallopeptidase, KEGG: cth:Cthe_0570 peptidase, membrane zinc metallopeptidase; peptidase, membrane zinc metallopeptidase complement(3542965..3543648) Clostridium beijerinckii NCIMB 8052 5294223 YP_001310134.1 CDS Cbei_3039 NC_009617.1 3544020 3544907 R catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis; fructose-1,6-bisphosphate aldolase complement(3544020..3544907) Clostridium beijerinckii NCIMB 8052 5294224 YP_001310135.1 CDS Cbei_3040 NC_009617.1 3545055 3545885 R PFAM: protein of unknown function DUF323; KEGG: bha:BH0900 transcriptional regulator (enhancement of xylanase A production); hypothetical protein complement(3545055..3545885) Clostridium beijerinckii NCIMB 8052 5294225 YP_001310136.1 CDS Cbei_3041 NC_009617.1 3546169 3546813 R PFAM: glycoside hydrolase, family 11; KEGG: bsu:BG10808 endo-1,4-beta-xylanase; endo-1,4-beta-xylanase complement(3546169..3546813) Clostridium beijerinckii NCIMB 8052 5294226 YP_001310137.1 CDS Cbei_3042 NC_009617.1 3547597 3547914 D hypothetical protein 3547597..3547914 Clostridium beijerinckii NCIMB 8052 5294227 YP_001310138.1 CDS Cbei_3043 NC_009617.1 3548475 3549092 R KEGG: cac:CAC0208 predicted membrane protein; CF-20 family; hypothetical protein complement(3548475..3549092) Clostridium beijerinckii NCIMB 8052 5294228 YP_001310139.1 CDS Cbei_3044 NC_009617.1 3550247 3550414 R hypothetical protein complement(3550247..3550414) Clostridium beijerinckii NCIMB 8052 5296400 YP_001310140.1 CDS Cbei_3045 NC_009617.1 3550680 3552401 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY3990 hypothetical protein; methyl-accepting chemotaxis sensory transducer complement(3550680..3552401) Clostridium beijerinckii NCIMB 8052 5294230 YP_001310141.1 CDS Cbei_3046 NC_009617.1 3553071 3554006 R PFAM: NADPH-dependent FMN reductase; KEGG: cac:CAC2528 multimeric flavodoxin WrbA fused to cytochrome c-like domain; NADPH-dependent FMN reductase complement(3553071..3554006) Clostridium beijerinckii NCIMB 8052 5294231 YP_001310142.1 CDS Cbei_3047 NC_009617.1 3554324 3556849 D PFAM: helix-turn-helix- domain containing protein, AraC type; glycoside hydrolase, family 39; KEGG: bha:BH1068 beta-xylosidase; xylan 1,4-beta-xylosidase 3554324..3556849 Clostridium beijerinckii NCIMB 8052 5294232 YP_001310143.1 CDS Cbei_3049 NC_009617.1 3557253 3558806 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpe:CPE0137 probable ABC transporter; ABC transporter complement(3557253..3558806) Clostridium beijerinckii NCIMB 8052 5296401 YP_001310144.1 CDS Cbei_3050 NC_009617.1 3558960 3559235 R KEGG: cac:CA_P0061 hypothetical protein; response regulator receiver protein complement(3558960..3559235) Clostridium beijerinckii NCIMB 8052 5294234 YP_001310145.1 CDS Cbei_3051 NC_009617.1 3559510 3560727 R PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: cac:CAC2534 HD_GYP hydrolase domain fused to HD hydrolase domain; metal dependent phosphohydrolase complement(3559510..3560727) Clostridium beijerinckii NCIMB 8052 5294235 YP_001310146.1 CDS Cbei_3052 NC_009617.1 3560796 3562187 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cth:Cthe_1846 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(3560796..3562187) Clostridium beijerinckii NCIMB 8052 5294236 YP_001310147.1 CDS Cbei_3053 NC_009617.1 3562171 3562887 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cth:Cthe_1847 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(3562171..3562887) Clostridium beijerinckii NCIMB 8052 5294237 YP_001310148.1 CDS Cbei_3054 NC_009617.1 3563517 3565262 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FMN-binding domain protein; KEGG: cac:CAC2762 polyferredoxin; FMN-binding domain-containing protein complement(3563517..3565262) Clostridium beijerinckii NCIMB 8052 5294238 YP_001310149.1 CDS Cbei_3055 NC_009617.1 3565310 3566371 R PFAM: ApbE family lipoprotein; KEGG: cac:CAC2761 thiamine biosynthesis lipoprotein ApbE; ApbE family lipoprotein complement(3565310..3566371) Clostridium beijerinckii NCIMB 8052 5294239 YP_001310150.1 CDS Cbei_3056 NC_009617.1 3566600 3566779 R PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: aci:ACIAD3328 regulatory or redox component complexing with Bfr, in iron storage and mobility (Bfd); BFD/(2Fe-2S)-binding domain-containing protein complement(3566600..3566779) Clostridium beijerinckii NCIMB 8052 5294240 YP_001310151.1 CDS Cbei_3057 NC_009617.1 3566933 3567553 R PFAM: nitroreductase; KEGG: cac:CAC0850 nitroreductase; nitroreductase complement(3566933..3567553) Clostridium beijerinckii NCIMB 8052 5294241 YP_001310152.1 CDS Cbei_3058 NC_009617.1 3567635 3568336 R PFAM: Pirin domain protein; KEGG: bcz:BCZK4772 pirin; pirin domain-containing protein complement(3567635..3568336) Clostridium beijerinckii NCIMB 8052 5294242 YP_001310153.1 CDS Cbei_3059 NC_009617.1 3568591 3569037 R PFAM: regulatory protein, MarR; KEGG: cpe:CPE0789 probable transcriptional regulator; MarR family transcriptional regulator complement(3568591..3569037) Clostridium beijerinckii NCIMB 8052 5294243 YP_001310154.1 CDS Cbei_3060 NC_009617.1 3569205 3570650 R PFAM: Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: cac:CAC2596 Rieske FeS-domain containing oxidoreductase; FAD dependent oxidoreductase complement(3569205..3570650) Clostridium beijerinckii NCIMB 8052 5294244 YP_001310155.1 CDS Cbei_3061 NC_009617.1 3570835 3571773 R KEGG: ctc:CTC02189 hypothetical protein; hypothetical protein complement(3570835..3571773) Clostridium beijerinckii NCIMB 8052 5294245 YP_001310156.1 CDS Cbei_3062 NC_009617.1 3572045 3572776 R PFAM: protein of unknown function UPF0016; KEGG: sat:SYN_01349 hypothetical membrane protein; hypothetical protein complement(3572045..3572776) Clostridium beijerinckii NCIMB 8052 5294246 YP_001310157.1 CDS Cbei_3063 NC_009617.1 3573564 3573839 D PFAM: protein of unknown function DUF156; KEGG: dsy:DSY0162 hypothetical protein; hypothetical protein 3573564..3573839 Clostridium beijerinckii NCIMB 8052 5294247 YP_001310158.1 CDS Cbei_3064 NC_009617.1 3573848 3575713 D TIGRFAM: ATPase P; copper-translocating P-type ATPase; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: dsy:DSY0154 hypothetical protein; heavy metal translocating P-type ATPase 3573848..3575713 Clostridium beijerinckii NCIMB 8052 5294248 YP_001310159.1 CDS Cbei_3065 NC_009617.1 3576024 3576527 R PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC2751 predicted acetyltransferase; N-acetyltransferase GCN5 complement(3576024..3576527) Clostridium beijerinckii NCIMB 8052 5294249 YP_001310160.1 CDS Cbei_3066 NC_009617.1 3576901 3578151 R KEGG: cpf:CPF_0639 hypothetical protein; hypothetical protein complement(3576901..3578151) Clostridium beijerinckii NCIMB 8052 5294250 YP_001310161.1 CDS Cbei_3067 NC_009617.1 3578329 3578649 D hypothetical protein 3578329..3578649 Clostridium beijerinckii NCIMB 8052 5294251 YP_001310162.1 CDS Cbei_3069 NC_009617.1 3579152 3579553 D PFAM: Rubrerythrin; KEGG: mja:MJ0746 hypothetical protein; rubrerythrin 3579152..3579553 Clostridium beijerinckii NCIMB 8052 5296402 YP_001310163.1 CDS Cbei_3070 NC_009617.1 3580070 3581116 D KEGG: cpe:CPE1341 probable galactoside ABC transporter; galactoside ABC transporter 3580070..3581116 Clostridium beijerinckii NCIMB 8052 5294253 YP_001310164.1 CDS Cbei_3071 NC_009617.1 3581336 3582166 R PFAM: GCN5-related N-acetyltransferase; KEGG: mac:MA4512 acetyltransferase (GNAT) family protein; N-acetyltransferase GCN5 complement(3581336..3582166) Clostridium beijerinckii NCIMB 8052 5294254 YP_001310165.1 CDS Cbei_3072 NC_009617.1 3582400 3583674 R KEGG: lmo:lmo0439 hypothetical protein; hypothetical protein complement(3582400..3583674) Clostridium beijerinckii NCIMB 8052 5294255 YP_001310166.1 CDS Cbei_3073 NC_009617.1 3583872 3584939 D KEGG: cpr:CPR_1341 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein 3583872..3584939 Clostridium beijerinckii NCIMB 8052 5294256 YP_001310167.1 CDS Cbei_3074 NC_009617.1 3585294 3587303 R TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: cth:Cthe_0806 PAS/PAC sensor hybrid histidine kinase; PAS/PAC sensor hybrid histidine kinase complement(3585294..3587303) Clostridium beijerinckii NCIMB 8052 5294257 YP_001310168.1 CDS Cbei_3075 NC_009617.1 3587405 3589159 R TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; KEGG: cno:NT01CX_2347 diguanylate cyclase/phosphodiesterase domain 2; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(3587405..3589159) Clostridium beijerinckii NCIMB 8052 5294258 YP_001310169.1 CDS Cbei_3076 NC_009617.1 3589149 3590267 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cpe:CPE1788 hypothetical protein; diguanylate cyclase complement(3589149..3590267) Clostridium beijerinckii NCIMB 8052 5294259 YP_001310170.1 CDS Cbei_3077 NC_009617.1 3590372 3590953 R PFAM: regulatory protein, TetR; KEGG: oih:OB3169 hypothetical protein; TetR family transcriptional regulator complement(3590372..3590953) Clostridium beijerinckii NCIMB 8052 5294260 YP_001310171.1 CDS Cbei_3078 NC_009617.1 3591316 3593580 R TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: cth:Cthe_0806 PAS/PAC sensor hybrid histidine kinase; PAS/PAC sensor hybrid histidine kinase complement(3591316..3593580) Clostridium beijerinckii NCIMB 8052 5294261 YP_001310172.1 CDS Cbei_3079 NC_009617.1 3593627 3596701 R TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein; KEGG: cth:Cthe_0806 PAS/PAC sensor hybrid histidine kinase; PAS/PAC sensor hybrid histidine kinase complement(3593627..3596701) Clostridium beijerinckii NCIMB 8052 5294262 YP_001310173.1 CDS Cbei_3080 NC_009617.1 3596975 3597184 R PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: cac:CAC2365 small acid-soluble spore protein; small acid-soluble spore protein, alpha/beta type complement(3596975..3597184) Clostridium beijerinckii NCIMB 8052 5294263 YP_001310174.1 CDS Cbei_3081 NC_009617.1 3597793 3598308 R TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; PFAM: NUDIX hydrolase; KEGG: plu:plu3987 unnamed protein product; some similarities with isopentenyl-diphosphate delta-isomerase (IPP isomerase) (isopentenyl pyrophosphate isomerase); isopentenyl-diphosphate delta-isomerase complement(3597793..3598308) Clostridium beijerinckii NCIMB 8052 5294264 YP_001310175.1 CDS Cbei_3082 NC_009617.1 3598419 3598772 R PFAM: helix-turn-helix, HxlR type; KEGG: bsu:BG11184 positive regulator of HxlAB; HxlR family transcriptional regulator complement(3598419..3598772) Clostridium beijerinckii NCIMB 8052 5294265 YP_001310176.1 CDS Cbei_3083 NC_009617.1 3598931 3599485 D PFAM: nitroreductase; KEGG: mmp:MMP0426 nitroreductase family; nitroreductase 3598931..3599485 Clostridium beijerinckii NCIMB 8052 5294266 YP_001310177.1 CDS Cbei_3084 NC_009617.1 3600014 3600583 R PFAM: protein of unknown function DUF1234; KEGG: mfa:Mfla_1025 protein of unknown function DUF1234; hypothetical protein complement(3600014..3600583) Clostridium beijerinckii NCIMB 8052 5294267 YP_001310178.1 CDS Cbei_3085 NC_009617.1 3600622 3601143 R PFAM: isochorismatase hydrolase; KEGG: lin:lin0638 hypothetical protein; isochorismatase hydrolase complement(3600622..3601143) Clostridium beijerinckii NCIMB 8052 5294268 YP_001310179.1 CDS Cbei_3086 NC_009617.1 3601167 3601427 R PFAM: TfoX, C-terminal domain protein; KEGG: swo:Swol_2034 hypothetical protein; TfoX domain-containing protein complement(3601167..3601427) Clostridium beijerinckii NCIMB 8052 5294269 YP_001310180.1 CDS Cbei_3087 NC_009617.1 3601785 3602096 R KEGG: dsy:DSY4814 hypothetical protein; hypothetical protein complement(3601785..3602096) Clostridium beijerinckii NCIMB 8052 5294270 YP_001310181.1 CDS Cbei_3088 NC_009617.1 3602654 3603022 D PFAM: iron dependent repressor; KEGG: cth:Cthe_0620 iron (metal) dependent repressor, DtxR family; iron dependent repressor 3602654..3603022 Clostridium beijerinckii NCIMB 8052 5294271 YP_001310182.1 CDS Cbei_3089 NC_009617.1 3603087 3604565 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC0528 ABC transporter ATPase component (two ATPase domains); ABC transporter complement(3603087..3604565) Clostridium beijerinckii NCIMB 8052 5294272 YP_001310183.1 CDS Cbei_3090 NC_009617.1 3605405 3605560 R KEGG: cno:NT01CX_0353 hypothetical protein; hypothetical protein complement(3605405..3605560) Clostridium beijerinckii NCIMB 8052 5294273 YP_001310184.1 CDS hisS NC_009617.1 3605980 3607275 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(3605980..3607275) Clostridium beijerinckii NCIMB 8052 5294274 YP_001310185.1 CDS Cbei_3092 NC_009617.1 3608365 3609750 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: tde:TDE0333 MATE efflux family protein; MATE efflux family protein complement(3608365..3609750) Clostridium beijerinckii NCIMB 8052 5294275 YP_001310186.1 CDS Cbei_3093 NC_009617.1 3609864 3611615 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY4891 hypothetical protein; ABC transporter complement(3609864..3611615) Clostridium beijerinckii NCIMB 8052 5294276 YP_001310187.1 CDS Cbei_3094 NC_009617.1 3611609 3613405 R PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY4892 hypothetical protein; ABC transporter complement(3611609..3613405) Clostridium beijerinckii NCIMB 8052 5294277 YP_001310188.1 CDS Cbei_3095 NC_009617.1 3613700 3614671 D PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: dsy:DSY3610 hypothetical protein; helix-turn-helix domain-containing protein 3613700..3614671 Clostridium beijerinckii NCIMB 8052 5294278 YP_001310189.1 CDS Cbei_3096 NC_009617.1 3615065 3616447 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY3613 hypothetical protein; ABC transporter complement(3615065..3616447) Clostridium beijerinckii NCIMB 8052 5294279 YP_001310190.1 CDS Cbei_3097 NC_009617.1 3616444 3617139 R PFAM: cobalt transport protein; KEGG: tde:TDE0283 transporter; cobalt transport protein complement(3616444..3617139) Clostridium beijerinckii NCIMB 8052 5294280 YP_001310191.1 CDS Cbei_3098 NC_009617.1 3617142 3617744 R TIGRFAM: conserved hypothetical integral membrane protein; KEGG: bad:BAD_0736 hypothetical protein; hypothetical protein complement(3617142..3617744) Clostridium beijerinckii NCIMB 8052 5294281 YP_001310192.1 CDS Cbei_3099 NC_009617.1 3618352 3619344 D PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: dsy:DSY3610 hypothetical protein; helix-turn-helix domain-containing protein 3618352..3619344 Clostridium beijerinckii NCIMB 8052 5294282 YP_001310193.1 CDS metH NC_009617.1 3619561 3623202 R one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase complement(3619561..3623202) Clostridium beijerinckii NCIMB 8052 5294283 YP_001310194.1 CDS Cbei_3101 NC_009617.1 3623926 3625332 R KEGG: cpf:CPF_0713 hypothetical protein; hypothetical protein complement(3623926..3625332) Clostridium beijerinckii NCIMB 8052 5294284 YP_001310195.1 CDS Cbei_3102 NC_009617.1 3625329 3625862 R TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: cpe:CPE0716 RNA polymerase ECF-type sigma factor; ECF subfamily RNA polymerase sigma-24 factor complement(3625329..3625862) Clostridium beijerinckii NCIMB 8052 5294285 YP_001310196.1 CDS Cbei_3103 NC_009617.1 3626437 3628281 R PFAM: peptidase M56, BlaR1; KEGG: cac:CAC3437 predicted membrane-associated Zn-dependent protease, HtpX family (BlaR subfamily); peptidase M56, BlaR1 complement(3626437..3628281) Clostridium beijerinckii NCIMB 8052 5294286 YP_001310197.1 CDS Cbei_3104 NC_009617.1 3628285 3628659 R PFAM: Penicillinase repressor; KEGG: bcz:BCZK2407 penicillinase repressor; CopY family transcriptional regulator complement(3628285..3628659) Clostridium beijerinckii NCIMB 8052 5294287 YP_001310198.1 CDS Cbei_3105 NC_009617.1 3629055 3630020 R PFAM: dihydrouridine synthase, DuS; KEGG: cpf:CPF_1482 dihydrouridine synthase family protein; dihydrouridine synthase complement(3629055..3630020) Clostridium beijerinckii NCIMB 8052 5294288 YP_001310199.1 CDS Cbei_3106 NC_009617.1 3630042 3630797 R PFAM: heat shock protein DnaJ domain protein; KEGG: mmu:639469 hypothetical protein LOC639469; heat shock protein DnaJ domain-containing protein complement(3630042..3630797) Clostridium beijerinckii NCIMB 8052 5294289 YP_001310200.1 CDS Cbei_3107 NC_009617.1 3631043 3631585 D PFAM: regulatory protein, TetR; KEGG: bld:BLi00563 TetR; TetR family transcriptional regulator 3631043..3631585 Clostridium beijerinckii NCIMB 8052 5294290 YP_001310201.1 CDS Cbei_3108 NC_009617.1 3631717 3634851 R PFAM: MMPL domain protein; KEGG: cac:CA_P0102 membrane protein; MMPL domain-containing protein complement(3631717..3634851) Clostridium beijerinckii NCIMB 8052 5294291 YP_001310202.1 CDS Cbei_3109 NC_009617.1 3635312 3636265 R KEGG: cac:CAC2528 multimeric flavodoxin WrbA fused to cytochrome c-like domain; multimeric flavodoxin WrbA/cytochrome c-like domain-containing protein complement(3635312..3636265) Clostridium beijerinckii NCIMB 8052 5294292 YP_001310203.1 CDS Cbei_3110 NC_009617.1 3637170 3638426 D KEGG: dsy:DSY0774 hypothetical protein; PucR family transcriptional regulator 3637170..3638426 Clostridium beijerinckii NCIMB 8052 5294293 YP_001310204.1 CDS Cbei_3111 NC_009617.1 3638966 3639181 R PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: sth:STH1431 small acid-soluble spore protein; small acid-soluble spore protein, alpha/beta type complement(3638966..3639181) Clostridium beijerinckii NCIMB 8052 5294294 YP_001310205.1 CDS Cbei_3112 NC_009617.1 3640071 3640976 D KEGG: bha:BH1976 hypothetical protein; hypothetical protein 3640071..3640976 Clostridium beijerinckii NCIMB 8052 5294295 YP_001310206.1 CDS Cbei_3113 NC_009617.1 3640992 3641198 D hypothetical protein 3640992..3641198 Clostridium beijerinckii NCIMB 8052 5294296 YP_001310207.1 CDS Cbei_3114 NC_009617.1 3641323 3642093 R hypothetical protein complement(3641323..3642093) Clostridium beijerinckii NCIMB 8052 5294297 YP_001310208.1 CDS Cbei_3115 NC_009617.1 3642387 3642905 D KEGG: mmp:MMP0794 hypothetical protein; hypothetical protein 3642387..3642905 Clostridium beijerinckii NCIMB 8052 5294298 YP_001310209.1 CDS Cbei_3116 NC_009617.1 3643153 3643416 R KEGG: tpa:TP0072 hypothetical protein; glutaredoxin-like protein complement(3643153..3643416) Clostridium beijerinckii NCIMB 8052 5294299 YP_001310210.1 CDS Cbei_3118 NC_009617.1 3646174 3647424 R PFAM: amino acid permease-associated region; KEGG: mmp:MMP0850 amino acid/polyamine transporter; family I; amino acid permease-associated protein complement(3646174..3647424) Clostridium beijerinckii NCIMB 8052 5296403 YP_001310211.1 CDS Cbei_3119 NC_009617.1 3647598 3649307 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cno:NT01CX_1196 membrane associated methyl-accepting chemotaxis protein with HAMP domain; methyl-accepting chemotaxis sensory transducer complement(3647598..3649307) Clostridium beijerinckii NCIMB 8052 5294301 YP_001310212.1 CDS Cbei_3120 NC_009617.1 3650325 3650975 R catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase complement(3650325..3650975) Clostridium beijerinckii NCIMB 8052 5294302 YP_001310213.1 CDS Cbei_3121 NC_009617.1 3651390 3652274 R PFAM: inner-membrane translocator; KEGG: cth:Cthe_1581 inner-membrane translocator; inner-membrane translocator complement(3651390..3652274) Clostridium beijerinckii NCIMB 8052 5294303 YP_001310214.1 CDS Cbei_3122 NC_009617.1 3652264 3653391 R PFAM: inner-membrane translocator; KEGG: cth:Cthe_1580 inner-membrane translocator; inner-membrane translocator complement(3652264..3653391) Clostridium beijerinckii NCIMB 8052 5294304 YP_001310215.1 CDS Cbei_3123 NC_009617.1 3653366 3654916 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cth:Cthe_1579 ABC transporter protein; ABC transporter complement(3653366..3654916) Clostridium beijerinckii NCIMB 8052 5294305 YP_001310216.1 CDS Cbei_3124 NC_009617.1 3655027 3656079 R PFAM: basic membrane lipoprotein; KEGG: sth:STH1236 sugar ABC transporter substrate-binding protein; basic membrane lipoprotein complement(3655027..3656079) Clostridium beijerinckii NCIMB 8052 5294306 YP_001310217.1 CDS deoD NC_009617.1 3656103 3656816 R catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase complement(3656103..3656816) Clostridium beijerinckii NCIMB 8052 5294307 YP_001310218.1 CDS Cbei_3126 NC_009617.1 3656842 3657525 R KEGG: lac:LBA1353 hypothetical protein; hypothetical protein complement(3656842..3657525) Clostridium beijerinckii NCIMB 8052 5294308 YP_001310219.1 CDS Cbei_3127 NC_009617.1 3657550 3658740 R catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase complement(3657550..3658740) Clostridium beijerinckii NCIMB 8052 5294309 YP_001310220.1 CDS Cbei_3128 NC_009617.1 3658816 3659217 R TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: tte:TTE0462 Cytidine deaminase; cytidine deaminase complement(3658816..3659217) Clostridium beijerinckii NCIMB 8052 5294310 YP_001310221.1 CDS Cbei_3129 NC_009617.1 3659251 3660036 R TIGRFAM: uridine phosphorylase; PFAM: purine or other phosphorylase, family 1; KEGG: cpf:CPF_0375 uridine phosphorylase; uridine phosphorylase complement(3659251..3660036) Clostridium beijerinckii NCIMB 8052 5294311 YP_001310222.1 CDS Cbei_3130 NC_009617.1 3660421 3661161 D PFAM: GntR family transcriptional regulator; KEGG: ctc:CTC01391 transcriptional regulatory protein; GntR family transcriptional regulator 3660421..3661161 Clostridium beijerinckii NCIMB 8052 5294312 YP_001310223.1 CDS Cbei_3131 NC_009617.1 3662001 3662324 D hypothetical protein 3662001..3662324 Clostridium beijerinckii NCIMB 8052 5294313 YP_001310224.1 CDS Cbei_3132 NC_009617.1 3662456 3663487 R PFAM: conserved hypothetical protein 698; KEGG: cno:NT01CX_2345 hypothetical protein; hypothetical protein complement(3662456..3663487) Clostridium beijerinckii NCIMB 8052 5294314 YP_001310225.1 CDS Cbei_3133 NC_009617.1 3663630 3664517 D PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: cno:NT01CX_2344 transcription regulators, LysR family; LysR family transcriptional regulator 3663630..3664517 Clostridium beijerinckii NCIMB 8052 5294315 YP_001310226.1 CDS Cbei_3134 NC_009617.1 3664948 3665967 R PFAM: aldo/keto reductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: gsu:GSU1370 oxidoreductase, aldo/keto reductase family; aldo/keto reductase complement(3664948..3665967) Clostridium beijerinckii NCIMB 8052 5294316 YP_001310227.1 CDS Cbei_3135 NC_009617.1 3666135 3667193 R KEGG: ctc:CTC00860 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein complement(3666135..3667193) Clostridium beijerinckii NCIMB 8052 5294317 YP_001310228.1 CDS Cbei_3136 NC_009617.1 3667443 3667952 R PFAM: GCN5-related N-acetyltransferase; KEGG: bat:BAS2637 acetyltransferase, GNAT family; N-acetyltransferase GCN5 complement(3667443..3667952) Clostridium beijerinckii NCIMB 8052 5294318 YP_001310229.1 CDS Cbei_3137 NC_009617.1 3668097 3668432 R PFAM: helix-turn-helix, HxlR type; KEGG: spm:spyM18_2160 hypothetical protein; HxlR family transcriptional regulator complement(3668097..3668432) Clostridium beijerinckii NCIMB 8052 5294319 YP_001310230.1 CDS Cbei_3138 NC_009617.1 3668657 3668965 D PFAM: Cupin 2, conserved barrel domain protein; KEGG: dsy:DSY3711 hypothetical protein; cupin 3668657..3668965 Clostridium beijerinckii NCIMB 8052 5294320 YP_001310231.1 CDS Cbei_3139 NC_009617.1 3669059 3669481 D KEGG: mmp:MMP0730 hypothetical protein; hypothetical protein 3669059..3669481 Clostridium beijerinckii NCIMB 8052 5294321 YP_001310232.1 CDS Cbei_3140 NC_009617.1 3669637 3670263 R PFAM: ThiJ/PfpI domain protein; KEGG: mba:Mbar_A0353 intracellular protease, ThiJ/PfpI family; ThiJ/PfpI domain-containing protein complement(3669637..3670263) Clostridium beijerinckii NCIMB 8052 5294322 YP_001310233.1 CDS Cbei_3141 NC_009617.1 3670315 3670497 R hypothetical protein complement(3670315..3670497) Clostridium beijerinckii NCIMB 8052 5294323 YP_001310234.1 CDS Cbei_3142 NC_009617.1 3671036 3672079 D KEGG: cpr:CPR_1341 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein 3671036..3672079 Clostridium beijerinckii NCIMB 8052 5294324 YP_001310235.1 CDS Cbei_3144 NC_009617.1 3672696 3673274 D PFAM: regulatory protein, TetR; KEGG: dsy:DSY2841 hypothetical protein; TetR family transcriptional regulator 3672696..3673274 Clostridium beijerinckii NCIMB 8052 5296404 YP_001310236.1 CDS Cbei_3145 NC_009617.1 3673386 3674738 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: tde:TDE0931 MATE efflux family protein; MATE efflux family protein 3673386..3674738 Clostridium beijerinckii NCIMB 8052 5294326 YP_001310237.1 CDS Cbei_3148 NC_009617.1 3676313 3676963 R PFAM: type IV pilus assembly PilZ; KEGG: ctc:CTC01654 flagellar protein; type IV pilus assembly PilZ complement(3676313..3676963) Clostridium beijerinckii NCIMB 8052 5296406 YP_001310238.1 CDS Cbei_3149 NC_009617.1 3677461 3677748 R hypothetical protein complement(3677461..3677748) Clostridium beijerinckii NCIMB 8052 5294328 YP_001310239.1 CDS Cbei_3150 NC_009617.1 3678105 3679211 R KEGG: mba:Mbar_A0773 outer membrane protein expression inhibitor; outer membrane protein expression inhibitor complement(3678105..3679211) Clostridium beijerinckii NCIMB 8052 5294329 YP_001310240.1 CDS Cbei_3151 NC_009617.1 3679330 3681405 R PFAM: UvrD/REP helicase; KEGG: cth:Cthe_2876 ATP-dependent DNA helicase PcrA; UvrD/REP helicase complement(3679330..3681405) Clostridium beijerinckii NCIMB 8052 5294330 YP_001310241.1 CDS Cbei_3152 NC_009617.1 3681556 3684219 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: bld:BLi02358 YprA; DEAD/DEAH box helicase complement(3681556..3684219) Clostridium beijerinckii NCIMB 8052 5294331 YP_001310242.1 CDS Cbei_3153 NC_009617.1 3685056 3685730 R hypothetical protein complement(3685056..3685730) Clostridium beijerinckii NCIMB 8052 5294332 YP_001310243.1 CDS Cbei_3154 NC_009617.1 3685832 3687229 R KEGG: syf:Synpcc7942_1164 hypothetical protein; hypothetical protein complement(3685832..3687229) Clostridium beijerinckii NCIMB 8052 5294333 YP_001310244.1 CDS Cbei_3155 NC_009617.1 3687286 3687507 R KEGG: cac:CAC0545 uncharacterized small protein, homolog of Treponema (6136517); hypothetical protein complement(3687286..3687507) Clostridium beijerinckii NCIMB 8052 5294334 YP_001310245.1 CDS Cbei_3156 NC_009617.1 3687596 3690577 R PFAM: type III restriction protein, res subunit; protein of unknown function DUF450; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: aav:Aave_3355 protein of unknown function DUF450; type III restriction protein, res subunit complement(3687596..3690577) Clostridium beijerinckii NCIMB 8052 5294335 YP_001310246.1 CDS Cbei_3157 NC_009617.1 3690755 3691537 R PFAM: HNH endonuclease; HNH endonuclease complement(3690755..3691537) Clostridium beijerinckii NCIMB 8052 5294336 YP_001310247.1 CDS Cbei_3158 NC_009617.1 3691542 3692477 R SMART: ATPase AAA; KEGG: hso:HS_1791 hypothetical protein; ATPase AAA complement(3691542..3692477) Clostridium beijerinckii NCIMB 8052 5294337 YP_001310248.1 CDS Cbei_3159 NC_009617.1 3692455 3693657 R PFAM: protein of unknown function DUF262; KEGG: ava:Ava_3592 protein of unknown function DUF262; hypothetical protein complement(3692455..3693657) Clostridium beijerinckii NCIMB 8052 5294338 YP_001310249.1 CDS Cbei_3160 NC_009617.1 3693758 3695167 R PFAM: restriction modification system DNA specificity domain; KEGG: sfr:Sfri_2607 restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit complement(3693758..3695167) Clostridium beijerinckii NCIMB 8052 5294339 YP_001310250.1 CDS Cbei_3161 NC_009617.1 3695167 3697188 R PFAM: N-6 DNA methylase; KEGG: mba:Mbar_A1016 type I restriction-modification system methyltransferase subunit; N-6 DNA methylase complement(3695167..3697188) Clostridium beijerinckii NCIMB 8052 5294340 YP_001310251.1 CDS Cbei_3162 NC_009617.1 3698001 3698573 D TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: cno:NT01CX_1545 sigma-70 region 2 domain protein; ECF subfamily RNA polymerase sigma-24 factor 3698001..3698573 Clostridium beijerinckii NCIMB 8052 5294341 YP_001310252.1 CDS Cbei_3164 NC_009617.1 3699064 3700419 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: mbu:Mbur_1925 MATE efflux family protein; MATE efflux family protein complement(3699064..3700419) Clostridium beijerinckii NCIMB 8052 5296407 YP_001310253.1 CDS Cbei_3165 NC_009617.1 3700478 3701353 R PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: bce:BC1115 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein complement(3700478..3701353) Clostridium beijerinckii NCIMB 8052 5294343 YP_001310254.1 CDS Cbei_3166 NC_009617.1 3702446 3702646 D hypothetical protein 3702446..3702646 Clostridium beijerinckii NCIMB 8052 5294344 YP_001310255.1 CDS Cbei_3167 NC_009617.1 3702779 3702919 R hypothetical protein complement(3702779..3702919) Clostridium beijerinckii NCIMB 8052 5294345 YP_001310256.1 CDS Cbei_3168 NC_009617.1 3703090 3703698 R PFAM: Phosphoglycerate mutase; KEGG: mac:MA3008 phosphoglycerate mutase family protein; phosphoglycerate mutase complement(3703090..3703698) Clostridium beijerinckii NCIMB 8052 5294346 YP_001310257.1 CDS Cbei_3169 NC_009617.1 3703834 3705666 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cno:NT01CX_0224 sensory transduction histidine kinase; multi-sensor signal transduction histidine kinase complement(3703834..3705666) Clostridium beijerinckii NCIMB 8052 5294347 YP_001310258.1 CDS Cbei_3170 NC_009617.1 3705928 3706395 R KEGG: cpr:CPR_1533 hypothetical protein; hypothetical protein complement(3705928..3706395) Clostridium beijerinckii NCIMB 8052 5294348 YP_001310259.1 CDS Cbei_3171 NC_009617.1 3706589 3707272 R PFAM: Accessory gene regulator B; KEGG: cpr:CPR_1532 accessory gene regulator protein B; accessory gene regulator B complement(3706589..3707272) Clostridium beijerinckii NCIMB 8052 5294349 YP_001310260.1 CDS Cbei_3172 NC_009617.1 3707680 3708081 R PFAM: Resolvase helix-turn-helix domain protein; resolvase domain-containing protein complement(3707680..3708081) Clostridium beijerinckii NCIMB 8052 5294350 YP_001310261.1 CDS Cbei_3173 NC_009617.1 3708425 3708949 R PFAM: regulatory protein, TetR; KEGG: cpr:CPR_0727 hypothetical protein; TetR family transcriptional regulator complement(3708425..3708949) Clostridium beijerinckii NCIMB 8052 5294351 YP_001310262.1 CDS Cbei_3175 NC_009617.1 3709826 3710794 D KEGG: mac:MA1837 hypothetical protein; hypothetical protein 3709826..3710794 Clostridium beijerinckii NCIMB 8052 5296408 YP_001310263.1 CDS Cbei_3176 NC_009617.1 3711162 3711851 R TIGRFAM: aspartate racemase; PFAM: Asp/Glu racemase; KEGG: ssa:SSA_0042 amino acid recemase; aspartate racemase complement(3711162..3711851) Clostridium beijerinckii NCIMB 8052 5294353 YP_001310264.1 CDS Cbei_3177 NC_009617.1 3711982 3712869 R PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: cac:CAC0023 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3711982..3712869) Clostridium beijerinckii NCIMB 8052 5294354 YP_001310265.1 CDS Cbei_3178 NC_009617.1 3713001 3713612 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bat:BAS2278 transporter LysE family; lysine exporter protein LysE/YggA 3713001..3713612 Clostridium beijerinckii NCIMB 8052 5294355 YP_001310266.1 CDS Cbei_3180 NC_009617.1 3714117 3714836 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ooe:OEOE_0396 carbonyl reductase; short-chain dehydrogenase/reductase SDR complement(3714117..3714836) Clostridium beijerinckii NCIMB 8052 5296409 YP_001310267.1 CDS Cbei_3181 NC_009617.1 3714970 3715863 D PFAM: LysR family transcriptional regulator; KEGG: lpl:lp_3024 transcription regulator; LysR family transcriptional regulator 3714970..3715863 Clostridium beijerinckii NCIMB 8052 5294357 YP_001310268.1 CDS Cbei_3182 NC_009617.1 3716134 3717096 R KEGG: bur:Bcep18194_C7591 alpha/beta superfamily-like hydrolase; alpha/beta fold family hydrolase complement(3716134..3717096) Clostridium beijerinckii NCIMB 8052 5294358 YP_001310269.1 CDS Cbei_3183 NC_009617.1 3717277 3717735 D PFAM: regulatory protein, MerR; KEGG: oih:OB0785 transcriptional regulator; MerR family transcriptional regulator 3717277..3717735 Clostridium beijerinckii NCIMB 8052 5294359 YP_001310270.1 CDS Cbei_3184 NC_009617.1 3718360 3719661 R PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: swo:Swol_2463 RNA-directed DNA polymerase (reverse transcriptase); RNA-directed DNA polymerase complement(3718360..3719661) Clostridium beijerinckii NCIMB 8052 5294360 YP_001310271.1 CDS Cbei_3185 NC_009617.1 3720401 3722368 R PFAM: tRNA synthetase class I (M); KEGG: tko:TK1049 methionyl-tRNA synthetase; methionine--tRNA ligase complement(3720401..3722368) Clostridium beijerinckii NCIMB 8052 5294361 YP_001310272.1 CDS Cbei_3186 NC_009617.1 3723026 3723499 R hypothetical protein complement(3723026..3723499) Clostridium beijerinckii NCIMB 8052 5294362 YP_001310273.1 CDS Cbei_3187 NC_009617.1 3723713 3724411 R hypothetical protein complement(3723713..3724411) Clostridium beijerinckii NCIMB 8052 5294363 YP_001310274.1 CDS Cbei_3188 NC_009617.1 3724450 3725016 R hypothetical protein complement(3724450..3725016) Clostridium beijerinckii NCIMB 8052 5294364 YP_001310275.1 CDS Cbei_3189 NC_009617.1 3725172 3725699 R KEGG: chu:CHU_1296 hypothetical protein; hypothetical protein complement(3725172..3725699) Clostridium beijerinckii NCIMB 8052 5294365 YP_001310276.1 CDS Cbei_3190 NC_009617.1 3725758 3726123 R KEGG: bur:Bcep18194_C6624 hypothetical protein; hypothetical protein complement(3725758..3726123) Clostridium beijerinckii NCIMB 8052 5294366 YP_001310277.1 CDS Cbei_3191 NC_009617.1 3726186 3726515 R hypothetical protein complement(3726186..3726515) Clostridium beijerinckii NCIMB 8052 5294367 YP_001310278.1 CDS Cbei_3192 NC_009617.1 3726574 3727074 R KEGG: bca:BCE_3512 hypothetical protein; hypothetical protein complement(3726574..3727074) Clostridium beijerinckii NCIMB 8052 5294368 YP_001310279.1 CDS Cbei_3193 NC_009617.1 3727343 3727708 R hypothetical protein complement(3727343..3727708) Clostridium beijerinckii NCIMB 8052 5294369 YP_001310280.1 CDS Cbei_3194 NC_009617.1 3728148 3728372 D hypothetical protein 3728148..3728372 Clostridium beijerinckii NCIMB 8052 5294370 YP_001310281.1 CDS Cbei_3195 NC_009617.1 3728541 3728759 D KEGG: chy:CHY_0145 hypothetical protein; hypothetical protein 3728541..3728759 Clostridium beijerinckii NCIMB 8052 5294371 YP_001310282.1 CDS Cbei_3196 NC_009617.1 3728956 3729570 R hypothetical protein complement(3728956..3729570) Clostridium beijerinckii NCIMB 8052 5294372 YP_001310283.1 CDS Cbei_3197 NC_009617.1 3729942 3731156 R TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; Glycosyltransferase 28, C-terminal domain; KEGG: cac:CA_P0045 glycosyl transferase; glycosyl transferase family protein complement(3729942..3731156) Clostridium beijerinckii NCIMB 8052 5294373 YP_001310284.1 CDS Cbei_3198 NC_009617.1 3731550 3732302 R PFAM: BRO domain protein domain protein; KEGG: cth:Cthe_2462 BRO-like protein; prophage antirepressor complement(3731550..3732302) Clostridium beijerinckii NCIMB 8052 5294374 YP_001310285.1 CDS Cbei_3199 NC_009617.1 3732328 3732570 R TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: chy:CHY_2622 transcriptional regulator, AbrB family; AbrB family transcriptional regulator complement(3732328..3732570) Clostridium beijerinckii NCIMB 8052 5294375 YP_001310286.1 CDS Cbei_3200 NC_009617.1 3733269 3733982 R KEGG: bha:BH3541 hypothetical protein; hypothetical protein complement(3733269..3733982) Clostridium beijerinckii NCIMB 8052 5294376 YP_001310287.1 CDS Cbei_3201 NC_009617.1 3733945 3734931 R TIGRFAM: primosome, DnaD subunit; phage replisome organizer, KEGG: lmo:lmo2317 similar to protein gp49; phage replisome organizer complement(3733945..3734931) Clostridium beijerinckii NCIMB 8052 5294377 YP_001310288.1 CDS Cbei_3202 NC_009617.1 3735500 3735883 D KEGG: cpf:CPF_0989 hypothetical protein; hypothetical protein 3735500..3735883 Clostridium beijerinckii NCIMB 8052 5294378 YP_001310289.1 CDS Cbei_3203 NC_009617.1 3736629 3740969 R KEGG: cac:CAC3442 DNA polymerase III (alpha subunit); TIGRFAM: DNA polymerase III, epsilon subunit; DNA polymerase III, alpha subunit; PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; Exonuclease, RNase T and DNA polymerase III; SMART: phosphoesterase PHP domain protein; Exonuclease; DNA polymerase III subunit alpha complement(3736629..3740969) Clostridium beijerinckii NCIMB 8052 5294379 YP_001310290.1 CDS Cbei_3204 NC_009617.1 3741483 3742100 R hypothetical protein complement(3741483..3742100) Clostridium beijerinckii NCIMB 8052 5294380 YP_001310291.1 CDS Cbei_3205 NC_009617.1 3742770 3742964 D KEGG: btl:BALH_1929 hypothetical protein; hypothetical protein 3742770..3742964 Clostridium beijerinckii NCIMB 8052 5294381 YP_001310292.1 CDS thrS NC_009617.1 3743152 3745059 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(3743152..3745059) Clostridium beijerinckii NCIMB 8052 5294382 YP_001310293.1 CDS Cbei_3207 NC_009617.1 3746059 3747201 R PFAM: cell wall binding repeat-containing protein; KEGG: mac:MA4289 cell surface protein; cell wall binding repeat-containing protein complement(3746059..3747201) Clostridium beijerinckii NCIMB 8052 5294383 YP_001310294.1 CDS Cbei_3208 NC_009617.1 3747756 3748319 R KEGG: cpf:CPF_0995 hypothetical protein; hypothetical protein complement(3747756..3748319) Clostridium beijerinckii NCIMB 8052 5294384 YP_001310295.1 CDS Cbei_3209 NC_009617.1 3748682 3748966 R hypothetical protein complement(3748682..3748966) Clostridium beijerinckii NCIMB 8052 5294385 YP_001310296.1 CDS Cbei_3210 NC_009617.1 3749017 3749913 R PFAM: GCN5-related N-acetyltransferase; regulatory protein, MarR; KEGG: bld:BLi00446 YbfA; MarR family transcriptional regulator complement(3749017..3749913) Clostridium beijerinckii NCIMB 8052 5294386 YP_001310297.1 CDS Cbei_3211 NC_009617.1 3750204 3750833 R hypothetical protein complement(3750204..3750833) Clostridium beijerinckii NCIMB 8052 5294387 YP_001310298.1 CDS Cbei_3212 NC_009617.1 3751122 3751880 R hypothetical protein complement(3751122..3751880) Clostridium beijerinckii NCIMB 8052 5294388 YP_001310299.1 CDS Cbei_3213 NC_009617.1 3752062 3752736 R TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: tko:TK0480 metal-dependent phosphohydrolase, HD superfamily; metal dependent phosphohydrolase complement(3752062..3752736) Clostridium beijerinckii NCIMB 8052 5294389 YP_001310300.1 CDS Cbei_3214 NC_009617.1 3753061 3753927 R KEGG: dsy:DSY3634 hypothetical protein; hypothetical protein complement(3753061..3753927) Clostridium beijerinckii NCIMB 8052 5294390 YP_001310301.1 CDS Cbei_3215 NC_009617.1 3754227 3754790 R PFAM: nitroreductase; KEGG: fnu:FN1223 oxygen-insensitive NAD(P)H nitroreductase / dihydropteridine reductase; nitroreductase complement(3754227..3754790) Clostridium beijerinckii NCIMB 8052 5294391 YP_001310302.1 CDS Cbei_3216 NC_009617.1 3755098 3755298 D hypothetical protein 3755098..3755298 Clostridium beijerinckii NCIMB 8052 5294392 YP_001310303.1 CDS Cbei_3217 NC_009617.1 3755868 3756527 R PFAM: chloramphenicol acetyltransferase; KEGG: btk:BT9727_2179 chloramphenicol O-acetyltransferase; chloramphenicol O-acetyltransferase complement(3755868..3756527) Clostridium beijerinckii NCIMB 8052 5294393 YP_001310304.1 CDS Cbei_3218 NC_009617.1 3756891 3757400 R KEGG: ppr:PBPRB1295 hypothetical protein; hypothetical protein complement(3756891..3757400) Clostridium beijerinckii NCIMB 8052 5294394 YP_001310305.1 CDS Cbei_3219 NC_009617.1 3758212 3759477 R PFAM: sodium:dicarboxylate symporter; KEGG: cpf:CPF_0756 proton/sodium-glutamate symporter; sodium:dicarboxylate symporter complement(3758212..3759477) Clostridium beijerinckii NCIMB 8052 5294395 YP_001310306.1 CDS Cbei_3220 NC_009617.1 3760120 3761580 R catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase complement(3760120..3761580) Clostridium beijerinckii NCIMB 8052 5294396 YP_001310307.1 CDS Cbei_3221 NC_009617.1 3761749 3762705 D PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: fnu:FN0603 transcriptional LysR family transcriptional regulator family; LysR family transcriptional regulator 3761749..3762705 Clostridium beijerinckii NCIMB 8052 5294397 YP_001310308.1 CDS Cbei_3222 NC_009617.1 3762977 3763210 R KEGG: cac:CA_P0101 hypothetical protein; hypothetical protein complement(3762977..3763210) Clostridium beijerinckii NCIMB 8052 5294398 YP_001310309.1 CDS Cbei_3223 NC_009617.1 3763314 3763697 R hypothetical protein complement(3763314..3763697) Clostridium beijerinckii NCIMB 8052 5294399 YP_001310310.1 CDS Cbei_3224 NC_009617.1 3763856 3764197 R KEGG: mac:MA3537 hypothetical protein; hypothetical protein complement(3763856..3764197) Clostridium beijerinckii NCIMB 8052 5294400 YP_001310311.1 CDS Cbei_3225 NC_009617.1 3765591 3765764 R hypothetical protein complement(3765591..3765764) Clostridium beijerinckii NCIMB 8052 5294401 YP_001310312.1 CDS Cbei_3226 NC_009617.1 3765884 3766108 R hypothetical protein complement(3765884..3766108) Clostridium beijerinckii NCIMB 8052 5294402 YP_001310313.1 CDS Cbei_3227 NC_009617.1 3766446 3766802 R PFAM: Endoribonuclease L-PSP; KEGG: cac:CAC1077 translation initiation inhibitor; endoribonuclease L-PSP complement(3766446..3766802) Clostridium beijerinckii NCIMB 8052 5294403 YP_001310314.1 CDS Cbei_3228 NC_009617.1 3766898 3767233 R hypothetical protein complement(3766898..3767233) Clostridium beijerinckii NCIMB 8052 5294404 YP_001310315.1 CDS Cbei_3229 NC_009617.1 3767659 3768267 R PFAM: ThiJ/PfpI domain protein; KEGG: cac:CAC2826 intracellular protease/amidase related enzyme (ThiJ family); ThiJ/PfpI domain-containing protein complement(3767659..3768267) Clostridium beijerinckii NCIMB 8052 5294405 YP_001310316.1 CDS Cbei_3231 NC_009617.1 3768867 3769142 R hypothetical protein complement(3768867..3769142) Clostridium beijerinckii NCIMB 8052 5296410 YP_001310317.1 CDS Cbei_3232 NC_009617.1 3769614 3770243 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bcz:BCZK2333 methyltransferase; type 11 methyltransferase 3769614..3770243 Clostridium beijerinckii NCIMB 8052 5294407 YP_001310318.1 CDS Cbei_3233 NC_009617.1 3770453 3770839 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: efa:EF1902 glyoxylase family protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(3770453..3770839) Clostridium beijerinckii NCIMB 8052 5294408 YP_001310319.1 CDS Cbei_3234 NC_009617.1 3770984 3771595 R PFAM: protein of unknown function DUF214; KEGG: cno:NT01CX_1271 cell division protein FtsX; hypothetical protein complement(3770984..3771595) Clostridium beijerinckii NCIMB 8052 5294409 YP_001310320.1 CDS Cbei_3235 NC_009617.1 3772163 3772639 R PFAM: transposase IS116/IS110/IS902 family protein; KEGG: cth:Cthe_1808 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein complement(3772163..3772639) Clostridium beijerinckii NCIMB 8052 5294410 YP_001310321.1 CDS Cbei_3236 NC_009617.1 3772687 3773364 R PFAM: transposase, IS111A/IS1328/IS1533; KEGG: lac:LBA1723 transposase; transposase, IS111A/IS1328/IS1533 complement(3772687..3773364) Clostridium beijerinckii NCIMB 8052 5294411 YP_001310322.1 CDS Cbei_3237 NC_009617.1 3773727 3774701 R PFAM: cell wall binding repeat-containing protein; KEGG: mac:MA4292 cell surface protein; cell wall binding repeat-containing protein complement(3773727..3774701) Clostridium beijerinckii NCIMB 8052 5294412 YP_001310323.1 CDS Cbei_3238 NC_009617.1 3775250 3776137 R PFAM: alpha/beta hydrolase fold; KEGG: cac:CA_P0097 carboxyl esterase, a/b hydrolase; alpha/beta fold family hydrolase complement(3775250..3776137) Clostridium beijerinckii NCIMB 8052 5294413 YP_001310324.1 CDS Cbei_3239 NC_009617.1 3776405 3777010 R KEGG: cno:NT01CX_1623 hypothetical protein; hypothetical protein complement(3776405..3777010) Clostridium beijerinckii NCIMB 8052 5294414 YP_001310325.1 CDS Cbei_3240 NC_009617.1 3777353 3777811 R PFAM: Cupin 2, conserved barrel domain protein; KEGG: dsy:DSY3711 hypothetical protein; cupin complement(3777353..3777811) Clostridium beijerinckii NCIMB 8052 5294415 YP_001310326.1 CDS Cbei_3241 NC_009617.1 3777954 3778385 R KEGG: oih:OB0269 hypothetical protein; hypothetical protein complement(3777954..3778385) Clostridium beijerinckii NCIMB 8052 5294416 YP_001310327.1 CDS Cbei_3242 NC_009617.1 3778840 3779457 R KEGG: mac:MA0740 hypothetical protein; hypothetical protein complement(3778840..3779457) Clostridium beijerinckii NCIMB 8052 5294417 YP_001310328.1 CDS Cbei_3243 NC_009617.1 3779832 3781070 R TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Miro domain protein; KEGG: cac:CAC1651 predicted GTPase with uncharacterized domain, ortholog of T.maritima (4980952); small GTP-binding protein complement(3779832..3781070) Clostridium beijerinckii NCIMB 8052 5294418 YP_001310329.1 CDS aspA NC_009617.1 3781226 3782623 D catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 3781226..3782623 Clostridium beijerinckii NCIMB 8052 5294419 YP_001310330.1 CDS Cbei_3245 NC_009617.1 3782681 3784186 R PFAM: Peptidoglycan-binding domain 1 protein; KEGG: cpe:CPE2560 spore cortex-lytic enzyme; peptidoglycan binding domain-containing protein complement(3782681..3784186) Clostridium beijerinckii NCIMB 8052 5294420 YP_001310331.1 CDS Cbei_3246 NC_009617.1 3784583 3785158 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: chy:CHY_0552 hypothetical protein; type 11 methyltransferase 3784583..3785158 Clostridium beijerinckii NCIMB 8052 5294421 YP_001310332.1 CDS Cbei_3247 NC_009617.1 3786227 3786391 R hypothetical protein complement(3786227..3786391) Clostridium beijerinckii NCIMB 8052 5294422 YP_001310333.1 CDS Cbei_3248 NC_009617.1 3787266 3787958 R KEGG: dsy:DSY4987 hypothetical protein; hypothetical protein complement(3787266..3787958) Clostridium beijerinckii NCIMB 8052 5294423 YP_001310334.1 CDS Cbei_3249 NC_009617.1 3788115 3788825 R PFAM: SNARE associated Golgi protein; KEGG: bha:BH2057 alkaline phosphatase; hypothetical protein complement(3788115..3788825) Clostridium beijerinckii NCIMB 8052 5294424 YP_001310335.1 CDS Cbei_3250 NC_009617.1 3789143 3789352 R PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: sth:STH1431 small acid-soluble spore protein; small acid-soluble spore protein, alpha/beta type complement(3789143..3789352) Clostridium beijerinckii NCIMB 8052 5294425 YP_001310336.1 CDS Cbei_3251 NC_009617.1 3789470 3789865 R hypothetical protein complement(3789470..3789865) Clostridium beijerinckii NCIMB 8052 5294426 YP_001310337.1 CDS Cbei_3252 NC_009617.1 3789965 3790837 R PFAM: protein of unknown function DUF161; KEGG: lmf:LMOf2365_2481 YitT family protein; hypothetical protein complement(3789965..3790837) Clostridium beijerinckii NCIMB 8052 5294427 YP_001310338.1 CDS Cbei_3253 NC_009617.1 3790923 3791570 D PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: cac:CA_P0082 CRP (cyclic AMP receptor protein) regulatory protein; Crp/Fnr family transcriptional regulator 3790923..3791570 Clostridium beijerinckii NCIMB 8052 5294428 YP_001310339.1 CDS Cbei_3254 NC_009617.1 3791706 3792251 R hypothetical protein complement(3791706..3792251) Clostridium beijerinckii NCIMB 8052 5294429 YP_001310340.1 CDS Cbei_3255 NC_009617.1 3792306 3792638 R KEGG: cac:CAC1494 hypothetical protein, CF-32 family; hypothetical protein complement(3792306..3792638) Clostridium beijerinckii NCIMB 8052 5294430 YP_001310341.1 CDS Cbei_3256 NC_009617.1 3792993 3793370 R hypothetical protein complement(3792993..3793370) Clostridium beijerinckii NCIMB 8052 5294431 YP_001310342.1 CDS Cbei_3257 NC_009617.1 3793494 3794285 R PFAM: Rubrerythrin; KEGG: cno:NT01CX_1830 hypothetical protein; rubrerythrin complement(3793494..3794285) Clostridium beijerinckii NCIMB 8052 5294432 YP_001310343.1 CDS Cbei_3258 NC_009617.1 3794564 3795007 D hypothetical protein 3794564..3795007 Clostridium beijerinckii NCIMB 8052 5294433 YP_001310344.1 CDS Cbei_3259 NC_009617.1 3795124 3796125 R PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; KEGG: ppe:PEPE_0096 predicted dehydrogenase related protein; oxidoreductase domain-containing protein complement(3795124..3796125) Clostridium beijerinckii NCIMB 8052 5294434 YP_001310345.1 CDS Cbei_3260 NC_009617.1 3796378 3797058 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: btk:BT9727_5088 hydrolase, haloacid dehalogenase-like family; possible 2-haloacid dehalogenase; HAD family hydrolase complement(3796378..3797058) Clostridium beijerinckii NCIMB 8052 5294435 YP_001310346.1 CDS Cbei_3261 NC_009617.1 3797569 3799179 D PFAM: permease; KEGG: cno:NT01CX_2389 predicted permease superfamily; permease 3797569..3799179 Clostridium beijerinckii NCIMB 8052 5294436 YP_001310347.1 CDS Cbei_3262 NC_009617.1 3799712 3800530 D PFAM: Protein of unknown function DUF1980; KEGG: ctc:CTC00938 membrane-spanning protein; hypothetical protein 3799712..3800530 Clostridium beijerinckii NCIMB 8052 5294437 YP_001310348.1 CDS Cbei_3263 NC_009617.1 3800644 3801381 R PFAM: cell wall binding repeat-containing protein; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; cell wall binding repeat-containing protein complement(3800644..3801381) Clostridium beijerinckii NCIMB 8052 5294438 YP_001310349.1 CDS Cbei_3264 NC_009617.1 3802094 3802300 R PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: cpr:CPR_1411 small, acid-soluble spore protein; small acid-soluble spore protein, alpha/beta type complement(3802094..3802300) Clostridium beijerinckii NCIMB 8052 5294439 YP_001310350.1 CDS Cbei_3265 NC_009617.1 3802437 3802826 R PFAM: amino acid-binding ACT domain protein; KEGG: dsy:DSY1559 hypothetical protein; amino acid-binding ACT domain-containing protein complement(3802437..3802826) Clostridium beijerinckii NCIMB 8052 5294440 YP_001310351.1 CDS Cbei_3266 NC_009617.1 3803262 3803900 R hypothetical protein complement(3803262..3803900) Clostridium beijerinckii NCIMB 8052 5294441 YP_001310352.1 CDS Cbei_3267 NC_009617.1 3805035 3806069 R PFAM: glycoside hydrolase, family 25; cell wall binding repeat-containing protein; KEGG: cac:CAC0554 autolytic lysozime (1,4-beta-N-acetylmuramidase), family 25 of glycosyl hydrolases ; peptodoglycan-binding domain; glycoside hydrolase complement(3805035..3806069) Clostridium beijerinckii NCIMB 8052 5294442 YP_001310353.1 CDS Cbei_3268 NC_009617.1 3806167 3806424 R PFAM: Holin, phage phi LC3; KEGG: sak:SAK_0652 prophage LambdaSa03, holin, phi LC3 family; holin, phage phi LC3 complement(3806167..3806424) Clostridium beijerinckii NCIMB 8052 5294443 YP_001310354.1 CDS Cbei_3269 NC_009617.1 3806768 3807028 R KEGG: eca:ECA1998 hypothetical protein; hypothetical protein complement(3806768..3807028) Clostridium beijerinckii NCIMB 8052 5294444 YP_001310355.1 CDS Cbei_3270 NC_009617.1 3807332 3807487 R hypothetical protein complement(3807332..3807487) Clostridium beijerinckii NCIMB 8052 5294445 YP_001310356.1 CDS Cbei_3271 NC_009617.1 3807658 3809103 R PFAM: glycoside hydrolase, family 1; KEGG: cac:CAC1408 phospho-beta-glucosidase; glycoside hydrolase complement(3807658..3809103) Clostridium beijerinckii NCIMB 8052 5294446 YP_001310357.1 CDS Cbei_3272 NC_009617.1 3809175 3810575 R KEGG: smu:SMU.772 glucan-binding protein D; BglB-like protein; glucan-binding protein D complement(3809175..3810575) Clostridium beijerinckii NCIMB 8052 5294447 YP_001310358.1 CDS Cbei_3273 NC_009617.1 3810670 3812574 R TIGRFAM: PTS system, glucose subfamily, IIA subunit; PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose-like IIB subunint; PFAM: sugar-specific permease, EIIA 1 domain; phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: cac:CAC1407 PTS system, beta-glucosides-specific IIABC component; PTS system beta-glucoside-specific transporter subunit IIABC complement(3810670..3812574) Clostridium beijerinckii NCIMB 8052 5294448 YP_001310359.1 CDS Cbei_3274 NC_009617.1 3812908 3813738 R PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: cac:CAC1406 transcriptional antiterminator (BglG family); transcriptional antiterminator BglG complement(3812908..3813738) Clostridium beijerinckii NCIMB 8052 5294449 YP_001310360.1 CDS Cbei_3275 NC_009617.1 3814296 3814505 R PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: sth:STH1431 small acid-soluble spore protein; small acid-soluble spore protein, alpha/beta type complement(3814296..3814505) Clostridium beijerinckii NCIMB 8052 5294450 YP_001310361.1 CDS Cbei_3276 NC_009617.1 3814787 3816193 R PFAM: amino acid permease-associated region; KEGG: cac:CAC3285 predicted amino acid transporter; amino acid permease-associated protein complement(3814787..3816193) Clostridium beijerinckii NCIMB 8052 5294451 YP_001310362.1 CDS Cbei_3277 NC_009617.1 3816673 3817329 R PFAM: class II aldolase/adducin family protein; KEGG: tte:TTE1592 ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; class II aldolase/adducin family protein complement(3816673..3817329) Clostridium beijerinckii NCIMB 8052 5294452 YP_001310363.1 CDS Cbei_3278 NC_009617.1 3817339 3818886 R PFAM: coenzyme A transferase; KEGG: ctc:CTC00478 acetyl-coA:acetoacetyl-coA transferase alpha subunit; coenzyme A transferase complement(3817339..3818886) Clostridium beijerinckii NCIMB 8052 5294453 YP_001310364.1 CDS Cbei_3279 NC_009617.1 3819498 3820388 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mba:Mbar_A1437 cobalt-zinc-cadmium resistance protein; cation diffusion facilitator family transporter complement(3819498..3820388) Clostridium beijerinckii NCIMB 8052 5294454 YP_001310365.1 CDS Cbei_3280 NC_009617.1 3821051 3821548 R KEGG: san:gbs1152 hypothetical protein; hypothetical protein complement(3821051..3821548) Clostridium beijerinckii NCIMB 8052 5294455 YP_001310366.1 CDS Cbei_3282 NC_009617.1 3824214 3825035 R PFAM: NUDIX hydrolase; NADH pyrophosphatase-like-like; Zinc ribbon, NADH pyrophosphatase; KEGG: cac:CAC3396 Nudix (MutT) family hydrolase, C4-type Zn-finger domain containing; NUDIX hydrolase complement(3824214..3825035) Clostridium beijerinckii NCIMB 8052 5296411 YP_001310367.1 CDS Cbei_3283 NC_009617.1 3825291 3825734 R KEGG: pfa:MAL1P2.10 hypothetical protein; hypothetical protein complement(3825291..3825734) Clostridium beijerinckii NCIMB 8052 5294457 YP_001310368.1 CDS Cbei_3284 NC_009617.1 3826389 3827531 R KEGG: cpr:CPR_0992 hypothetical protein; hypothetical protein complement(3826389..3827531) Clostridium beijerinckii NCIMB 8052 5294458 YP_001310369.1 CDS Cbei_3285 NC_009617.1 3827843 3828280 R KEGG: cpf:CPF_0742 hypothetical protein; hypothetical protein complement(3827843..3828280) Clostridium beijerinckii NCIMB 8052 5294459 YP_001310370.1 CDS Cbei_3286 NC_009617.1 3829321 3829578 R hypothetical protein complement(3829321..3829578) Clostridium beijerinckii NCIMB 8052 5294460 YP_001310371.1 CDS Cbei_3288 NC_009617.1 3830387 3831370 R TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: cth:Cthe_1293 metal dependent phosphohydrolase; metal dependent phosphohydrolase complement(3830387..3831370) Clostridium beijerinckii NCIMB 8052 5296412 YP_001310372.1 CDS Cbei_3289 NC_009617.1 3832282 3832566 R hypothetical protein complement(3832282..3832566) Clostridium beijerinckii NCIMB 8052 5294462 YP_001310373.1 CDS Cbei_3290 NC_009617.1 3832707 3833501 R PFAM: polysaccharide deacetylase; KEGG: cno:NT01CX_1505 predicted xylanase/chitin deacetylase; polysaccharide deacetylase complement(3832707..3833501) Clostridium beijerinckii NCIMB 8052 5294463 YP_001310374.1 CDS Cbei_3291 NC_009617.1 3833771 3834241 R PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC2935 predicted acetyltransferase; N-acetyltransferase GCN5 complement(3833771..3834241) Clostridium beijerinckii NCIMB 8052 5294464 YP_001310375.1 CDS Cbei_3292 NC_009617.1 3834441 3834872 R KEGG: dsy:DSY0685 hypothetical protein; hypothetical protein complement(3834441..3834872) Clostridium beijerinckii NCIMB 8052 5294465 YP_001310376.1 CDS Cbei_3293 NC_009617.1 3835117 3835440 R PFAM: Thioredoxin domain; KEGG: cpf:CPF_1847 thioredoxin family protein; thioredoxin domain-containing protein complement(3835117..3835440) Clostridium beijerinckii NCIMB 8052 5294466 YP_001310377.1 CDS Cbei_3294 NC_009617.1 3835442 3835903 R KEGG: cpf:CPF_1303 hypothetical protein; hypothetical protein complement(3835442..3835903) Clostridium beijerinckii NCIMB 8052 5294467 YP_001310378.1 CDS Cbei_3295 NC_009617.1 3836239 3836802 R KEGG: hch:HCH_01166 ABC-type sugar transport system, periplasmic component; sugar ABC transporter periplasmic protein complement(3836239..3836802) Clostridium beijerinckii NCIMB 8052 5294468 YP_001310379.1 CDS Cbei_3296 NC_009617.1 3836854 3837177 R KEGG: dsy:DSY2272 hypothetical protein; hypothetical protein complement(3836854..3837177) Clostridium beijerinckii NCIMB 8052 5294469 YP_001310380.1 CDS Cbei_3297 NC_009617.1 3837215 3837439 R hypothetical protein complement(3837215..3837439) Clostridium beijerinckii NCIMB 8052 5294470 YP_001310381.1 CDS Cbei_3298 NC_009617.1 3837523 3838575 R KEGG: cpe:CPE1341 probable galactoside ABC transporter; galactoside ABC transporter complement(3837523..3838575) Clostridium beijerinckii NCIMB 8052 5294471 YP_001310382.1 CDS Cbei_3299 NC_009617.1 3838812 3840743 R PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC3415 ABC-type multidrug/protein/lipid transport system, ATPase component; multidrug ABC transporter ATPase complement(3838812..3840743) Clostridium beijerinckii NCIMB 8052 5294472 YP_001310383.1 CDS Cbei_3300 NC_009617.1 3840736 3842469 R PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC3414 ABC-type multidrug/protein/lipid transport system, ATPase component; multidrug ABC transporter ATPase complement(3840736..3842469) Clostridium beijerinckii NCIMB 8052 5294473 YP_001310384.1 CDS Cbei_3301 NC_009617.1 3842750 3843181 R PFAM: regulatory protein, MarR; KEGG: cac:CAC3413 transcriptional regulator, MarR/EmrR family; MarR family transcriptional regulator complement(3842750..3843181) Clostridium beijerinckii NCIMB 8052 5294474 YP_001310385.1 CDS Cbei_3302 NC_009617.1 3843559 3844890 D KEGG: ctc:CTC00453 sialidase; hypothetical protein 3843559..3844890 Clostridium beijerinckii NCIMB 8052 5294475 YP_001310386.1 CDS Cbei_3303 NC_009617.1 3845151 3846938 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CBS domain containing protein; EAL domain protein; KEGG: cac:CAC2702 possible signal transduction protein (containing EAL, CBS and GGDEF domains); diguanylate cyclase/phosphodiesterase complement(3845151..3846938) Clostridium beijerinckii NCIMB 8052 5294476 YP_001310387.1 CDS Cbei_3304 NC_009617.1 3847166 3847888 D KEGG: cac:CAC3401 predicted membrane protein; hypothetical protein 3847166..3847888 Clostridium beijerinckii NCIMB 8052 5294477 YP_001310388.1 CDS Cbei_3305 NC_009617.1 3848106 3848666 R KEGG: cno:NT01CX_0007 hypothetical protein; hypothetical protein complement(3848106..3848666) Clostridium beijerinckii NCIMB 8052 5294478 YP_001310389.1 CDS Cbei_3306 NC_009617.1 3848865 3849608 R KEGG: cpf:CPF_0796 hypothetical protein; hypothetical protein complement(3848865..3849608) Clostridium beijerinckii NCIMB 8052 5294479 YP_001310390.1 CDS Cbei_3307 NC_009617.1 3849778 3850476 R PFAM: beta-lactamase domain protein; KEGG: cac:CAC1386 Zn-dependent hydrolase, glyoxylase family; beta-lactamase domain-containing protein complement(3849778..3850476) Clostridium beijerinckii NCIMB 8052 5294480 YP_001310391.1 CDS Cbei_3308 NC_009617.1 3850499 3852349 R PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY1091 hypothetical protein; ABC transporter complement(3850499..3852349) Clostridium beijerinckii NCIMB 8052 5294481 YP_001310392.1 CDS Cbei_3309 NC_009617.1 3852356 3854074 R PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY1090 hypothetical protein; ABC transporter complement(3852356..3854074) Clostridium beijerinckii NCIMB 8052 5294482 YP_001310393.1 CDS Cbei_3310 NC_009617.1 3854246 3854650 R PFAM: regulatory protein, MerR; KEGG: oih:OB0785 transcriptional regulator; MerR family transcriptional regulator complement(3854246..3854650) Clostridium beijerinckii NCIMB 8052 5294483 YP_001310394.1 CDS Cbei_3311 NC_009617.1 3855060 3856043 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rle:RL1385 short-chain dehydrogenase/oxidoreductase; short-chain dehydrogenase/reductase SDR 3855060..3856043 Clostridium beijerinckii NCIMB 8052 5294484 YP_001310395.1 CDS Cbei_3312 NC_009617.1 3856258 3856542 D hypothetical protein 3856258..3856542 Clostridium beijerinckii NCIMB 8052 5294485 YP_001310396.1 CDS Cbei_3313 NC_009617.1 3856628 3857761 R KEGG: spo:SPBC582.06c hypothetical protein; hypothetical protein complement(3856628..3857761) Clostridium beijerinckii NCIMB 8052 5294486 YP_001310397.1 CDS Cbei_3314 NC_009617.1 3858136 3859842 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: tdn:Tmden_1328 diguanylate cyclase (GGDEF domain); diguanylate cyclase 3858136..3859842 Clostridium beijerinckii NCIMB 8052 5294487 YP_001310398.1 CDS Cbei_3315 NC_009617.1 3859908 3860273 R PFAM: helix-turn-helix, HxlR type; KEGG: cac:CAC0195 predicted transcriptional regulator; HxlR family transcriptional regulator complement(3859908..3860273) Clostridium beijerinckii NCIMB 8052 5294488 YP_001310399.1 CDS Cbei_3316 NC_009617.1 3860403 3861458 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: cac:CAC0196 NADH-dependent flavine oxidoreductase; NADH:flavin oxidoreductase 3860403..3861458 Clostridium beijerinckii NCIMB 8052 5294489 YP_001310400.1 CDS Cbei_3317 NC_009617.1 3861684 3862940 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: cac:CA_P0029 permease MDR-related; major facilitator superfamily transporter complement(3861684..3862940) Clostridium beijerinckii NCIMB 8052 5294490 YP_001310401.1 CDS Cbei_3318 NC_009617.1 3863139 3863702 D PFAM: regulatory protein, TetR; KEGG: cac:CA_P0028 HTH transcriptional regulator TetR family; TetR family transcriptional regulator 3863139..3863702 Clostridium beijerinckii NCIMB 8052 5294491 YP_001310402.1 CDS Cbei_3319 NC_009617.1 3863950 3864438 D hypothetical protein 3863950..3864438 Clostridium beijerinckii NCIMB 8052 5294492 YP_001310403.1 CDS Cbei_3320 NC_009617.1 3864570 3866582 R PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC00942 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(3864570..3866582) Clostridium beijerinckii NCIMB 8052 5294493 YP_001310404.1 CDS Cbei_3321 NC_009617.1 3867037 3868413 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cno:NT01CX_1433 subtilin biosynthesis sensor protein SpaK; integral membrane sensor signal transduction histidine kinase complement(3867037..3868413) Clostridium beijerinckii NCIMB 8052 5294494 YP_001310405.1 CDS Cbei_3322 NC_009617.1 3868401 3869063 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cno:NT01CX_1432 subtilin biosynthesis regulatory protein SpaR; two component transcriptional regulator complement(3868401..3869063) Clostridium beijerinckii NCIMB 8052 5294495 YP_001310406.1 CDS Cbei_3323 NC_009617.1 3869131 3869907 R KEGG: cno:NT01CX_1431 antibiotic transport-associated permease SpaG/MutG; antibiotic transport-associated permease SpaG/MutG complement(3869131..3869907) Clostridium beijerinckii NCIMB 8052 5294496 YP_001310407.1 CDS Cbei_3324 NC_009617.1 3869912 3870664 R KEGG: ctc:CTC00626 lantibiotic permease spaE/mutE; lantibiotic permease spaE/mutE complement(3869912..3870664) Clostridium beijerinckii NCIMB 8052 5294497 YP_001310408.1 CDS Cbei_3325 NC_009617.1 3870664 3871368 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ctc:CTC00625 lantibiotic transport ATP-binding protein spaF/mutF; ABC transporter complement(3870664..3871368) Clostridium beijerinckii NCIMB 8052 5294498 YP_001310409.1 CDS Cbei_3326 NC_009617.1 3871678 3872313 R PFAM: protein of unknown function DUF975; KEGG: btk:BT9727_4984 hypothetical protein; hypothetical protein complement(3871678..3872313) Clostridium beijerinckii NCIMB 8052 5294499 YP_001310410.1 CDS Cbei_3327 NC_009617.1 3872706 3874043 R PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: cac:CAC0460 CBS-domain containing protein, YHDP B.subtilis ortholog; hypothetical protein complement(3872706..3874043) Clostridium beijerinckii NCIMB 8052 5294500 YP_001310411.1 CDS Cbei_3328 NC_009617.1 3874383 3875606 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: dsy:DSY4471 hypothetical protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(3874383..3875606) Clostridium beijerinckii NCIMB 8052 5294501 YP_001310412.1 CDS Cbei_3329 NC_009617.1 3875615 3875941 R PFAM: glutaredoxin 2; Thioredoxin domain; KEGG: dsy:DSY0299 hypothetical protein; thioredoxin domain-containing protein complement(3875615..3875941) Clostridium beijerinckii NCIMB 8052 5294502 YP_001310413.1 CDS Cbei_3330 NC_009617.1 3876184 3878232 R PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: dsy:DSY5011 hypothetical protein; type I phosphodiesterase/nucleotide pyrophosphatase complement(3876184..3878232) Clostridium beijerinckii NCIMB 8052 5294503 YP_001310414.1 CDS Cbei_3331 NC_009617.1 3878376 3879203 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ctc:CTC01394 taurine transport ATP-binding protein tauB; ABC transporter complement(3878376..3879203) Clostridium beijerinckii NCIMB 8052 5294504 YP_001310415.1 CDS Cbei_3332 NC_009617.1 3879219 3880259 R TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein, family 3; KEGG: ctc:CTC01393 taurine-binding periplasmic protein precursor; aliphatic sulfonate ABC transporter periplasmic protein complement(3879219..3880259) Clostridium beijerinckii NCIMB 8052 5294505 YP_001310416.1 CDS Cbei_3333 NC_009617.1 3880358 3881167 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ctc:CTC01392 taurine transport system permease tauC; taurine ABC transporter permease complement(3880358..3881167) Clostridium beijerinckii NCIMB 8052 5294506 YP_001310417.1 CDS Cbei_3334 NC_009617.1 3881983 3882327 R hypothetical protein complement(3881983..3882327) Clostridium beijerinckii NCIMB 8052 5294507 YP_001310418.1 CDS Cbei_3335 NC_009617.1 3882745 3883392 R PFAM: regulatory protein, TetR; KEGG: cac:CAC0019 transcriptional regulator, AcrR family; TetR family transcriptional regulator complement(3882745..3883392) Clostridium beijerinckii NCIMB 8052 5294508 YP_001310419.1 CDS Cbei_3336 NC_009617.1 3883545 3884864 D TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC0020 MDR-type permease; EmrB/QacA family drug resistance transporter 3883545..3884864 Clostridium beijerinckii NCIMB 8052 5294509 YP_001310420.1 CDS Cbei_3337 NC_009617.1 3884934 3885212 D hypothetical protein 3884934..3885212 Clostridium beijerinckii NCIMB 8052 5294510 YP_001310421.1 CDS Cbei_3338 NC_009617.1 3885590 3885895 R KEGG: cac:CAC0562 predicted membrane protein; hypothetical protein complement(3885590..3885895) Clostridium beijerinckii NCIMB 8052 5294511 YP_001310422.1 CDS Cbei_3339 NC_009617.1 3885888 3886415 R KEGG: ctc:CTC00433 hypothetical protein; hypothetical protein complement(3885888..3886415) Clostridium beijerinckii NCIMB 8052 5294512 YP_001310423.1 CDS Cbei_3340 NC_009617.1 3886396 3886848 R hypothetical protein complement(3886396..3886848) Clostridium beijerinckii NCIMB 8052 5294513 YP_001310424.1 CDS Cbei_3341 NC_009617.1 3886845 3887360 R TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: sth:STH907 RNA polymerase ECF-type sigma factor; ECF subfamily RNA polymerase sigma-24 factor complement(3886845..3887360) Clostridium beijerinckii NCIMB 8052 5294514 YP_001310425.1 CDS Cbei_3343 NC_009617.1 3887784 3888830 D KEGG: cpr:CPR_1341 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein 3887784..3888830 Clostridium beijerinckii NCIMB 8052 5296413 YP_001310426.1 CDS Cbei_3344 NC_009617.1 3888977 3889402 R TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA subunit; PFAM: PTS system fructose subfamily IIA component; KEGG: yps:YPTB1634 PTS system, mannose-specific IIAB component; PTS system mannose/fructose/sorbose family transporter subunit IIA complement(3888977..3889402) Clostridium beijerinckii NCIMB 8052 5294516 YP_001310427.1 CDS Cbei_3345 NC_009617.1 3889512 3890426 D PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: cac:CAC3494 transcription regulator, YOBV B.subtilis homolog; helix-turn-helix, type 11 domain-containing protein 3889512..3890426 Clostridium beijerinckii NCIMB 8052 5294517 YP_001310428.1 CDS Cbei_3346 NC_009617.1 3890585 3891706 D KEGG: lsa:LSA0809 DNA alkylation repair enzyme; DNA alkylation repair protein 3890585..3891706 Clostridium beijerinckii NCIMB 8052 5294518 YP_001310429.1 CDS Cbei_3347 NC_009617.1 3892002 3893060 D KEGG: cpe:CPE1341 probable galactoside ABC transporter; galactoside ABC transporter 3892002..3893060 Clostridium beijerinckii NCIMB 8052 5294519 YP_001310430.1 CDS Cbei_3348 NC_009617.1 3893426 3893809 D TIGRFAM: desulfoferrodoxin; PFAM: Desulfoferrodoxin, ferrous iron-binding region; Desulfoferrodoxin Dfx domain protein; KEGG: ctc:CTC02454 desulfoferrodoxin homolog; desulfoferrodoxin 3893426..3893809 Clostridium beijerinckii NCIMB 8052 5294520 YP_001310431.1 CDS Cbei_3349 NC_009617.1 3894070 3894486 R PFAM: MaoC domain protein dehydratase; KEGG: tte:TTE0551 predicted acyl dehydratase; dehydratase complement(3894070..3894486) Clostridium beijerinckii NCIMB 8052 5294521 YP_001310432.1 CDS Cbei_3350 NC_009617.1 3894551 3895945 R PFAM: Gluconate transporter; Citrate transporter; KEGG: ctc:CTC00709 integral membrane permease; citrate transporter complement(3894551..3895945) Clostridium beijerinckii NCIMB 8052 5294522 YP_001310433.1 CDS Cbei_3351 NC_009617.1 3896020 3897564 R PFAM: coenzyme A transferase; KEGG: ctc:CTC00708 acetyl-coA:acetoacetyl-coA transferase alpha subunit; coenzyme A transferase complement(3896020..3897564) Clostridium beijerinckii NCIMB 8052 5294523 YP_001310434.1 CDS Cbei_3352 NC_009617.1 3897854 3899578 R TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; PAS fold domain protein; SMART: PAS domain containing protein; ATPase AAA; KEGG: ctc:CTC00707 transcriptional regulatory protein; sigma-54 dependent trancsriptional regulator complement(3897854..3899578) Clostridium beijerinckii NCIMB 8052 5294524 YP_001310435.1 CDS Cbei_3353 NC_009617.1 3900099 3900899 D PFAM: glycoside hydrolase, family 18; SMART: chitinase II; KEGG: bha:BH0916 chitinase; glycoside hydrolase 3900099..3900899 Clostridium beijerinckii NCIMB 8052 5294525 YP_001310436.1 CDS Cbei_3354 NC_009617.1 3901043 3901678 R PFAM: NADPH-dependent FMN reductase; KEGG: cac:CAC3486 multimeric flavodoxin WrbA family protein; NADPH-dependent FMN reductase complement(3901043..3901678) Clostridium beijerinckii NCIMB 8052 5294526 YP_001310437.1 CDS Cbei_3355 NC_009617.1 3902031 3902372 D PFAM: helix-turn-helix, HxlR type; KEGG: cac:CAC3487 predicted transcriptional regulator; HxlR family transcriptional regulator 3902031..3902372 Clostridium beijerinckii NCIMB 8052 5294527 YP_001310438.1 CDS Cbei_3356 NC_009617.1 3902990 3904702 D PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01211 methyl-accepting chemotaxis protein TlpA; methyl-accepting chemotaxis sensory transducer 3902990..3904702 Clostridium beijerinckii NCIMB 8052 5294528 YP_001310439.1 CDS Cbei_3357 NC_009617.1 3905019 3905864 R hypothetical protein complement(3905019..3905864) Clostridium beijerinckii NCIMB 8052 5294529 YP_001310440.1 CDS Cbei_3358 NC_009617.1 3906105 3907565 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cac:CAC1507 sensory transduction histidine kinase (with HAMP domain); integral membrane sensor signal transduction histidine kinase complement(3906105..3907565) Clostridium beijerinckii NCIMB 8052 5294530 YP_001310441.1 CDS Cbei_3359 NC_009617.1 3907571 3908227 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cac:CAC1506 response regulator (CheY-like receiver domain and a HTH); two component transcriptional regulator complement(3907571..3908227) Clostridium beijerinckii NCIMB 8052 5294531 YP_001310442.1 CDS Cbei_3360 NC_009617.1 3908615 3909304 R PFAM: cyclic nucleotide-binding; KEGG: bcz:BCZK3165 possible transcriptional regulator; cyclic nucleotide-binding domain protein; cyclic nucleotide-binding protein complement(3908615..3909304) Clostridium beijerinckii NCIMB 8052 5294532 YP_001310443.1 CDS Cbei_3361 NC_009617.1 3909434 3910126 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cpr:CPR_0743 HAD superfamily (subfamily IA) hydrolase, TIGR02254; HAD family hydrolase 3909434..3910126 Clostridium beijerinckii NCIMB 8052 5294533 YP_001310444.1 CDS Cbei_3362 NC_009617.1 3910378 3910884 R PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_2017 choline binding protein A; cell wall binding repeat-containing protein complement(3910378..3910884) Clostridium beijerinckii NCIMB 8052 5294534 YP_001310445.1 CDS Cbei_3363 NC_009617.1 3911521 3912777 D PFAM: CBS domain containing protein; MgtE intracellular region; PRC-barrel domain protein; KEGG: cno:NT01CX_1389 magnesium transporter; MgtE integral membrane protein 3911521..3912777 Clostridium beijerinckii NCIMB 8052 5294535 YP_001310446.1 CDS Cbei_3364 NC_009617.1 3912774 3914015 D PFAM: natural resistance-associated macrophage protein; KEGG: cac:CAC3329 Mn transporter NRAMP family; natural resistance-associated macrophage protein 3912774..3914015 Clostridium beijerinckii NCIMB 8052 5294536 YP_001310447.1 CDS Cbei_3365 NC_009617.1 3914338 3915456 R PFAM: cell cycle protein; KEGG: cno:NT01CX_1695 rod shape-determining protein RodA; cell cycle protein complement(3914338..3915456) Clostridium beijerinckii NCIMB 8052 5294537 YP_001310448.1 CDS Cbei_3366 NC_009617.1 3916081 3917118 R PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: oih:OB2705 transcriptional regulator; LacI family transcriptional regulator complement(3916081..3917118) Clostridium beijerinckii NCIMB 8052 5294538 YP_001310449.1 CDS Cbei_3367 NC_009617.1 3917463 3918716 R PFAM: sugar-specific permease, SgaT/UlaA; KEGG: gka:GK2016 PTS system, unknown pentitol phosphotransferase enzyme IIC component; sugar-specific permease, SgaT/UlaA complement(3917463..3918716) Clostridium beijerinckii NCIMB 8052 5294539 YP_001310450.1 CDS Cbei_3368 NC_009617.1 3919266 3919595 D PFAM: Cupin 2, conserved barrel domain protein; KEGG: vvu:VV2_0912 hypothetical protein; cupin 3919266..3919595 Clostridium beijerinckii NCIMB 8052 5294540 YP_001310451.1 CDS Cbei_3369 NC_009617.1 3919883 3920104 R TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; KEGG: oih:OB0493 hypothetical conserved protein; L-rhamnose 1-epimerase complement(3919883..3920104) Clostridium beijerinckii NCIMB 8052 5294541 YP_001310452.1 CDS Cbei_3370 NC_009617.1 3920232 3920867 R PFAM: Ribose/galactose isomerase; KEGG: cac:CAC2606 hypothetical protein; hypothetical protein complement(3920232..3920867) Clostridium beijerinckii NCIMB 8052 5294542 YP_001310453.1 CDS Cbei_3371 NC_009617.1 3920883 3921686 R Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate; gluconate 5-dehydrogenase complement(3920883..3921686) Clostridium beijerinckii NCIMB 8052 5294543 YP_001310454.1 CDS Cbei_3372 NC_009617.1 3921877 3922734 D PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: cac:CAC2608 trancriptional regulator of AraC family; helix-turn-helix domain-containing protein 3921877..3922734 Clostridium beijerinckii NCIMB 8052 5294544 YP_001310455.1 CDS Cbei_3373 NC_009617.1 3922919 3923848 D PFAM: Peptidoglycan-binding domain 1 protein; KEGG: psp:PSPPH_2396 prophage PSPPH04, lysozyme; peptidoglycan binding domain-containing protein 3922919..3923848 Clostridium beijerinckii NCIMB 8052 5294545 YP_001310456.1 CDS Cbei_3374 NC_009617.1 3923921 3924604 R KEGG: dsy:DSY1061 hypothetical protein; hypothetical protein complement(3923921..3924604) Clostridium beijerinckii NCIMB 8052 5294546 YP_001310457.1 CDS Cbei_3375 NC_009617.1 3925033 3925281 R TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: cth:Cthe_2100 transcriptional regulator, AbrB family; AbrB family transcriptional regulator complement(3925033..3925281) Clostridium beijerinckii NCIMB 8052 5294547 YP_001310458.1 CDS Cbei_3376 NC_009617.1 3925451 3926482 R PFAM: protein of unknown function DUF1646; KEGG: tte:TTE2541 hypothetical protein; hypothetical protein complement(3925451..3926482) Clostridium beijerinckii NCIMB 8052 5294548 YP_001310459.1 CDS Cbei_3377 NC_009617.1 3926843 3929953 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: cth:Cthe_0511 histidine kinase; PAS/PAC sensor signal transduction histidine kinase complement(3926843..3929953) Clostridium beijerinckii NCIMB 8052 5294549 YP_001310460.1 CDS Cbei_3378 NC_009617.1 3930072 3930422 R KEGG: cpf:CPF_0994 hypothetical protein; hypothetical protein complement(3930072..3930422) Clostridium beijerinckii NCIMB 8052 5294550 YP_001310461.1 CDS Cbei_3379 NC_009617.1 3930443 3930937 R PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: pau:PA14_40700 hypothetical protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein complement(3930443..3930937) Clostridium beijerinckii NCIMB 8052 5294551 YP_001310462.1 CDS Cbei_3380 NC_009617.1 3931265 3931927 R PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_0345 choline binding protein C; cell wall binding repeat-containing protein complement(3931265..3931927) Clostridium beijerinckii NCIMB 8052 5294552 YP_001310463.1 CDS Cbei_3381 NC_009617.1 3932335 3932721 R KEGG: cpr:CPR_C0052 hypothetical protein; hypothetical protein complement(3932335..3932721) Clostridium beijerinckii NCIMB 8052 5294553 YP_001310464.1 CDS Cbei_3382 NC_009617.1 3932737 3932970 R KEGG: cpr:CPR_C0053 hypothetical protein; hypothetical protein complement(3932737..3932970) Clostridium beijerinckii NCIMB 8052 5294554 YP_001310465.1 CDS Cbei_3383 NC_009617.1 3933223 3934650 R TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; Ig domain protein, group 2 domain protein; KEGG: cac:CAC3086 protein containing cell adhesion domain; hypothetical protein complement(3933223..3934650) Clostridium beijerinckii NCIMB 8052 5294555 YP_001310466.1 CDS Cbei_3384 NC_009617.1 3934868 3935041 R hypothetical protein complement(3934868..3935041) Clostridium beijerinckii NCIMB 8052 5294556 YP_001310467.1 CDS Cbei_3385 NC_009617.1 3935043 3935327 R KEGG: cth:Cthe_2496 hypothetical protein; hypothetical protein complement(3935043..3935327) Clostridium beijerinckii NCIMB 8052 5294557 YP_001310468.1 CDS Cbei_3386 NC_009617.1 3935351 3937162 R KEGG: mba:Mbar_A0416 hypothetical protein; periplasmic ligand-binding sensor protein complement(3935351..3937162) Clostridium beijerinckii NCIMB 8052 5294558 YP_001310469.1 CDS Cbei_3387 NC_009617.1 3937175 3937957 R KEGG: bca:BCE_4654 hypothetical protein; hypothetical protein complement(3937175..3937957) Clostridium beijerinckii NCIMB 8052 5294559 YP_001310470.1 CDS Cbei_3388 NC_009617.1 3938128 3938781 R KEGG: cvi:CV0418 probable tail fiber-related protein; tail fiber-like protein complement(3938128..3938781) Clostridium beijerinckii NCIMB 8052 5294560 YP_001310471.1 CDS Cbei_3389 NC_009617.1 3938783 3939487 R KEGG: ctc:CTC02112 phage-like element pbsx protein XkdT; hypothetical protein complement(3938783..3939487) Clostridium beijerinckii NCIMB 8052 5294561 YP_001310472.1 CDS Cbei_3390 NC_009617.1 3939480 3940589 R PFAM: Baseplate J family protein; KEGG: ctc:CTC02115 phage-like element pbsx protein XkdT; baseplate J family protein complement(3939480..3940589) Clostridium beijerinckii NCIMB 8052 5294562 YP_001310473.1 CDS Cbei_3391 NC_009617.1 3940579 3941019 R KEGG: ctc:CTC02116 phage-like element pbsx protein XkdS; hypothetical protein complement(3940579..3941019) Clostridium beijerinckii NCIMB 8052 5294563 YP_001310474.1 CDS Cbei_3392 NC_009617.1 3941012 3941335 R hypothetical protein complement(3941012..3941335) Clostridium beijerinckii NCIMB 8052 5294564 YP_001310475.1 CDS Cbei_3393 NC_009617.1 3941335 3942339 R KEGG: ctc:CTC02117 phage-like element pbsx protein XkdQ; phage-like element pbsx protein XkdQ complement(3941335..3942339) Clostridium beijerinckii NCIMB 8052 5294565 YP_001310476.1 CDS Cbei_3394 NC_009617.1 3942336 3942815 R KEGG: bsu:BG11287 unknown; hypothetical protein complement(3942336..3942815) Clostridium beijerinckii NCIMB 8052 5294566 YP_001310477.1 CDS Cbei_3395 NC_009617.1 3942829 3945249 R KEGG: sak:SAK_0756 prophage LambdaSa04, tail tape measure protein, TP901 family; hypothetical protein complement(3942829..3945249) Clostridium beijerinckii NCIMB 8052 5294567 YP_001310478.1 CDS Cbei_3396 NC_009617.1 3945425 3945829 R PFAM: Phage XkdN-like protein; KEGG: ctc:CTC02122 hypothetical protein; Phage XkdN-like protein complement(3945425..3945829) Clostridium beijerinckii NCIMB 8052 5294568 YP_001310479.1 CDS Cbei_3397 NC_009617.1 3946233 3946664 R KEGG: ctc:CTC02124 phage-like element pbsx protein XkdM; phage-like element pbsx protein XkdM complement(3946233..3946664) Clostridium beijerinckii NCIMB 8052 5294569 YP_001310480.1 CDS Cbei_3398 NC_009617.1 3946677 3947798 R KEGG: ctc:CTC02125 phage-like element pbsx protein XkdK; phage-like element pbsx protein XkdK complement(3946677..3947798) Clostridium beijerinckii NCIMB 8052 5294570 YP_001310481.1 CDS Cbei_3399 NC_009617.1 3947811 3948245 R hypothetical protein complement(3947811..3948245) Clostridium beijerinckii NCIMB 8052 5294571 YP_001310482.1 CDS Cbei_3400 NC_009617.1 3948737 3949402 D KEGG: ago:AGOS_AFL125W AFL125Wp; hypothetical protein 3948737..3949402 Clostridium beijerinckii NCIMB 8052 5294572 YP_001310483.1 CDS Cbei_3401 NC_009617.1 3949477 3949983 R hypothetical protein complement(3949477..3949983) Clostridium beijerinckii NCIMB 8052 5294573 YP_001310484.1 CDS Cbei_3402 NC_009617.1 3950184 3950738 R in yeast cells this enzyme removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''-cyclic phosphate; functions in tRNA splicing; the function and substrate of bacterial enzymes in organisms that do not perform splicing is unknown; RNA 2'-phosphotransferase-like protein complement(3950184..3950738) Clostridium beijerinckii NCIMB 8052 5294574 YP_001310485.1 CDS Cbei_3403 NC_009617.1 3951312 3953558 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: ana:alr4878 two-component hybrid sensor and regulator; integral membrane sensor hybrid histidine kinase 3951312..3953558 Clostridium beijerinckii NCIMB 8052 5294575 YP_001310486.1 CDS Cbei_3404 NC_009617.1 3953559 3954062 D KEGG: tcx:Tcr_2180 PAS/PAC sensor hybrid histidine kinase; response regulator receiver protein 3953559..3954062 Clostridium beijerinckii NCIMB 8052 5294576 YP_001310487.1 CDS Cbei_3405 NC_009617.1 3954055 3955266 D PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cth:Cthe_0511 histidine kinase; response regulator receiver sensor signal transduction histidine kinase 3954055..3955266 Clostridium beijerinckii NCIMB 8052 5294577 YP_001310488.1 CDS Cbei_3406 NC_009617.1 3955843 3956415 D TIGRFAM: RNA polymerase sigma-70; KEGG: cno:NT01CX_1545 sigma-70 region 2 domain protein; RNA polymerase sigma-70 3955843..3956415 Clostridium beijerinckii NCIMB 8052 5294578 YP_001310489.1 CDS Cbei_3407 NC_009617.1 3956663 3958627 R PFAM: NHL repeat containing protein; cell wall binding repeat-containing protein; KEGG: spd:SPD_0126 pneumococcal surface protein A; cell wall binding repeat-containing protein complement(3956663..3958627) Clostridium beijerinckii NCIMB 8052 5294579 YP_001310490.1 CDS Cbei_3408 NC_009617.1 3960295 3960840 D KEGG: ddi:DDBDRAFT_0188052 hypothetical protein; hypothetical protein 3960295..3960840 Clostridium beijerinckii NCIMB 8052 5296417 YP_001310491.1 CDS Cbei_3409 NC_009617.1 3961075 3961323 D hypothetical protein 3961075..3961323 Clostridium beijerinckii NCIMB 8052 5294581 YP_001310492.1 CDS Cbei_3410 NC_009617.1 3961516 3962409 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: cac:CAC0875 predicted permease; hypothetical protein complement(3961516..3962409) Clostridium beijerinckii NCIMB 8052 5294582 YP_001310493.1 CDS Cbei_3411 NC_009617.1 3962687 3963598 D PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: bsu:BG12130 similar to transcriptional regulator (AraC/XylS family); helix-turn-helix domain-containing protein 3962687..3963598 Clostridium beijerinckii NCIMB 8052 5294583 YP_001310494.1 CDS Cbei_3412 NC_009617.1 3963746 3964312 D KEGG: cac:CAC0785 hypothetical protein; hypothetical protein 3963746..3964312 Clostridium beijerinckii NCIMB 8052 5294584 YP_001310495.1 CDS Cbei_3413 NC_009617.1 3964848 3965624 R PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: csa:Csal_2719 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(3964848..3965624) Clostridium beijerinckii NCIMB 8052 5294585 YP_001310496.1 CDS Cbei_3414 NC_009617.1 3965630 3966226 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: btl:BALH_2175 transporter LysE family; lysine exporter protein LysE/YggA complement(3965630..3966226) Clostridium beijerinckii NCIMB 8052 5294586 YP_001310497.1 CDS Cbei_3415 NC_009617.1 3966396 3966815 R PFAM: GCN5-related N-acetyltransferase; KEGG: bcl:ABC1921 acetyltransferase, GNAT family; N-acetyltransferase GCN5 complement(3966396..3966815) Clostridium beijerinckii NCIMB 8052 5294587 YP_001310498.1 CDS Cbei_3416 NC_009617.1 3967352 3968095 R PFAM: Protein of unknown function DUF1963; KEGG: cac:CAC0820 conserved protein, ortholog YwqG B.subtilis; hypothetical protein complement(3967352..3968095) Clostridium beijerinckii NCIMB 8052 5294588 YP_001310499.1 CDS Cbei_3417 NC_009617.1 3968233 3968532 R hypothetical protein complement(3968233..3968532) Clostridium beijerinckii NCIMB 8052 5294589 YP_001310500.1 CDS Cbei_3418 NC_009617.1 3968670 3969233 R PFAM: nitroreductase; KEGG: chy:CHY_1798 nitroreductase; nitroreductase complement(3968670..3969233) Clostridium beijerinckii NCIMB 8052 5294590 YP_001310501.1 CDS Cbei_3419 NC_009617.1 3969301 3969828 R KEGG: mla:Mlab_0185 hypothetical protein; hypothetical protein complement(3969301..3969828) Clostridium beijerinckii NCIMB 8052 5294591 YP_001310502.1 CDS Cbei_3420 NC_009617.1 3970043 3970648 R PFAM: Protein of unknown function DUF1847; KEGG: mmp:MMP0851 hypothetical protein; hypothetical protein complement(3970043..3970648) Clostridium beijerinckii NCIMB 8052 5294592 YP_001310503.1 CDS Cbei_3421 NC_009617.1 3971102 3971398 R KEGG: bld:BLi02197 hypothetical protein; hypothetical protein complement(3971102..3971398) Clostridium beijerinckii NCIMB 8052 5294593 YP_001310504.1 CDS Cbei_3422 NC_009617.1 3971859 3972911 R KEGG: cpe:CPE1341 probable galactoside ABC transporter; galactoside ABC transporter complement(3971859..3972911) Clostridium beijerinckii NCIMB 8052 5294594 YP_001310505.1 CDS Cbei_3423 NC_009617.1 3973248 3974129 R PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: bcl:ABC3710 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3973248..3974129) Clostridium beijerinckii NCIMB 8052 5294595 YP_001310506.1 CDS Cbei_3424 NC_009617.1 3974262 3974879 D PFAM: Phosphoglycerate mutase; KEGG: ctc:CTC02637 phosphoglycerate mutase; phosphoglycerate mutase 3974262..3974879 Clostridium beijerinckii NCIMB 8052 5294596 YP_001310507.1 CDS Cbei_3425 NC_009617.1 3974969 3975178 R hypothetical protein complement(3974969..3975178) Clostridium beijerinckii NCIMB 8052 5294597 YP_001310508.1 CDS Cbei_3426 NC_009617.1 3975395 3975787 R TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: swo:Swol_2168 iron-binding protein, hemerythrin; hemerythrin-like metal-binding protein complement(3975395..3975787) Clostridium beijerinckii NCIMB 8052 5294598 YP_001310509.1 CDS Cbei_3427 NC_009617.1 3975888 3976385 R PFAM: GCN5-related N-acetyltransferase; KEGG: fnu:FN1294 ribosomal-protein-alanine acetyltransferase; N-acetyltransferase GCN5 complement(3975888..3976385) Clostridium beijerinckii NCIMB 8052 5294599 YP_001310510.1 CDS Cbei_3428 NC_009617.1 3976425 3976733 R KEGG: cac:CAC3398 uncharacterized conserved protein, YbhB family; hypothetical protein complement(3976425..3976733) Clostridium beijerinckii NCIMB 8052 5294600 YP_001310511.1 CDS Cbei_3429 NC_009617.1 3976816 3977181 R PFAM: helix-turn-helix, HxlR type; KEGG: cac:CAC3399 predicted transcriptional regulator; HxlR family transcriptional regulator complement(3976816..3977181) Clostridium beijerinckii NCIMB 8052 5294601 YP_001310512.1 CDS Cbei_3430 NC_009617.1 3977213 3977776 R KEGG: det:DET0571 hypothetical protein; hypothetical protein complement(3977213..3977776) Clostridium beijerinckii NCIMB 8052 5294602 YP_001310513.1 CDS Cbei_3432 NC_009617.1 3978732 3979448 R KEGG: ssp:SSP1337 ABC transporter permease; hypothetical protein complement(3978732..3979448) Clostridium beijerinckii NCIMB 8052 5296418 YP_001310514.1 CDS Cbei_3433 NC_009617.1 3979463 3980293 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: btl:BALH_4326 ABC transporter ATP-binding protein; ABC transporter complement(3979463..3980293) Clostridium beijerinckii NCIMB 8052 5294604 YP_001310515.1 CDS Cbei_3434 NC_009617.1 3980799 3981221 R TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: cth:Cthe_1582 cytidine deaminase; cytidine deaminase complement(3980799..3981221) Clostridium beijerinckii NCIMB 8052 5294605 YP_001310516.1 CDS Cbei_3435 NC_009617.1 3981655 3982578 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: dsy:DSY1618 hypothetical protein; hypothetical protein complement(3981655..3982578) Clostridium beijerinckii NCIMB 8052 5294606 YP_001310517.1 CDS Cbei_3436 NC_009617.1 3982571 3983410 R PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: dsy:DSY1619 hypothetical protein; AraC family transcriptional regulator complement(3982571..3983410) Clostridium beijerinckii NCIMB 8052 5294607 YP_001310518.1 CDS Cbei_3437 NC_009617.1 3984061 3984450 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bat:BAS3152 glyoxylase family protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(3984061..3984450) Clostridium beijerinckii NCIMB 8052 5294608 YP_001310519.1 CDS Cbei_3438 NC_009617.1 3984513 3985127 R PFAM: transferase hexapeptide repeat containing protein; KEGG: cac:CAC2692 O-acetyltransferase, from isoleucine patch superfamily; maltose O-acetyltransferase complement(3984513..3985127) Clostridium beijerinckii NCIMB 8052 5294609 YP_001310520.1 CDS Cbei_3439 NC_009617.1 3985208 3986455 R PFAM: major facilitator superfamily MFS_1; KEGG: deh:cbdb_A1621 major facilitator family transporter; major facilitator superfamily transporter complement(3985208..3986455) Clostridium beijerinckii NCIMB 8052 5294610 YP_001310521.1 CDS Cbei_3440 NC_009617.1 3986725 3987618 D PFAM: helix-turn-helix- domain containing protein, AraC type; Cupin 2, conserved barrel domain protein; KEGG: bad:BAD_1048 hypothetical protein; helix-turn-helix domain-containing protein 3986725..3987618 Clostridium beijerinckii NCIMB 8052 5294611 YP_001310522.1 CDS Cbei_3441 NC_009617.1 3988035 3989492 R KEGG: tte:TTE2242 transposase; transposase complement(3988035..3989492) Clostridium beijerinckii NCIMB 8052 5294612 YP_001310523.1 CDS Cbei_3442 NC_009617.1 3989663 3990373 D PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: bha:BH1786 transcriptional regulator (AraC/XylS family); helix-turn-helix domain-containing protein 3989663..3990373 Clostridium beijerinckii NCIMB 8052 5294613 YP_001310524.1 CDS Cbei_3443 NC_009617.1 3990469 3991314 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mmp:MMP0438 hypothetical protein; 4Fe-4S ferredoxin 3990469..3991314 Clostridium beijerinckii NCIMB 8052 5294614 YP_001310525.1 CDS Cbei_3444 NC_009617.1 3991549 3991866 D hypothetical protein 3991549..3991866 Clostridium beijerinckii NCIMB 8052 5294615 YP_001310526.1 CDS Cbei_3445 NC_009617.1 3991992 3992312 R PFAM: small multidrug resistance protein; KEGG: rpb:RPB_3160 small multidrug resistance protein; small multidrug resistance protein complement(3991992..3992312) Clostridium beijerinckii NCIMB 8052 5294616 YP_001310527.1 CDS Cbei_3446 NC_009617.1 3992441 3993130 R PFAM: Radical SAM domain protein; KEGG: cpf:CPF_1039 radical SAM domain protein; radical SAM domain-containing protein complement(3992441..3993130) Clostridium beijerinckii NCIMB 8052 5294617 YP_001310528.1 CDS Cbei_3447 NC_009617.1 3993150 3993755 R KEGG: cac:CA_P0113 solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta; Solo B3/4 domain-containing protein complement(3993150..3993755) Clostridium beijerinckii NCIMB 8052 5294618 YP_001310529.1 CDS Cbei_3448 NC_009617.1 3994127 3995371 R KEGG: rno:684690 hypothetical protein LOC684690; hypothetical protein complement(3994127..3995371) Clostridium beijerinckii NCIMB 8052 5294619 YP_001310530.1 CDS Cbei_3449 NC_009617.1 3996118 3996576 R PFAM: NUDIX hydrolase; KEGG: fra:Francci3_0900 NUDIX hydrolase; NUDIX hydrolase complement(3996118..3996576) Clostridium beijerinckii NCIMB 8052 5294620 YP_001310531.1 CDS Cbei_3450 NC_009617.1 3996771 3997307 D KEGG: bha:BH2521 transposase (21); transposase (21) 3996771..3997307 Clostridium beijerinckii NCIMB 8052 5294621 YP_001310532.1 CDS Cbei_3451 NC_009617.1 3997327 3997833 D KEGG: bha:BH2520 transposase related protein (20); transposase-like protein (20) 3997327..3997833 Clostridium beijerinckii NCIMB 8052 5294622 YP_001310533.1 CDS Cbei_3452 NC_009617.1 3997997 3998398 R hypothetical protein complement(3997997..3998398) Clostridium beijerinckii NCIMB 8052 5294623 YP_001310534.1 CDS Cbei_3453 NC_009617.1 3999601 4000473 R PFAM: helix-turn-helix- domain containing protein, AraC type; transcription activator, effector binding; KEGG: dsy:DSY2786 hypothetical protein; transcription activator, effector binding complement(3999601..4000473) Clostridium beijerinckii NCIMB 8052 5294624 YP_001310535.1 CDS Cbei_3454 NC_009617.1 4000491 4001600 R PFAM: peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: dsy:DSY2787 hypothetical protein; peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase complement(4000491..4001600) Clostridium beijerinckii NCIMB 8052 5294625 YP_001310536.1 CDS Cbei_3455 NC_009617.1 4001698 4002861 R PFAM: regulatory protein, MerR; KEGG: cno:NT01CX_0956 HTH-type transcriptional activator TipA; MerR family transcriptional regulator complement(4001698..4002861) Clostridium beijerinckii NCIMB 8052 5294626 YP_001310537.1 CDS Cbei_3456 NC_009617.1 4003101 4003307 R PFAM: helix-turn-helix domain protein; KEGG: cpe:CPE0258 probable transcriptional regulator; XRE family transcriptional regulator complement(4003101..4003307) Clostridium beijerinckii NCIMB 8052 5294627 YP_001310538.1 CDS Cbei_3457 NC_009617.1 4003332 4003778 R hypothetical protein complement(4003332..4003778) Clostridium beijerinckii NCIMB 8052 5294628 YP_001310539.1 CDS Cbei_3458 NC_009617.1 4004086 4004718 R KEGG: cac:CAC0777 acetyltransferase (the isoleucine patch superfamily); acetyltransferase complement(4004086..4004718) Clostridium beijerinckii NCIMB 8052 5294629 YP_001310540.1 CDS Cbei_3459 NC_009617.1 4005458 4006288 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: gme:Gmet_0807 4Fe-4S ferredoxin, iron-sulfur binding protein; 4Fe-4S ferredoxin complement(4005458..4006288) Clostridium beijerinckii NCIMB 8052 5294630 YP_001310541.1 CDS Cbei_3460 NC_009617.1 4006345 4007091 R PFAM: SMC domain protein; SMART: ATPase AAA; KEGG: rme:Rmet_4896 SMC protein-like protein; SMC domain-containing protein complement(4006345..4007091) Clostridium beijerinckii NCIMB 8052 5294631 YP_001310542.1 CDS Cbei_3461 NC_009617.1 4007144 4007575 R hypothetical protein complement(4007144..4007575) Clostridium beijerinckii NCIMB 8052 5294632 YP_001310543.1 CDS Cbei_3462 NC_009617.1 4007935 4008753 R PFAM: Abortive infection protein; KEGG: pai:PAE1905 P.aerophilum family 322 protein part 2, authentic frameshift; abortive infection protein complement(4007935..4008753) Clostridium beijerinckii NCIMB 8052 5294633 YP_001310544.1 CDS Cbei_3463 NC_009617.1 4008971 4009543 R PFAM: Tellurite resistance protein TehB; Methyltransferase type 12; KEGG: cno:NT01CX_2005 hypothetical protein; type 12 methyltransferase complement(4008971..4009543) Clostridium beijerinckii NCIMB 8052 5294634 YP_001310545.1 CDS Cbei_3464 NC_009617.1 4009961 4011121 R KEGG: btl:BALH_2706 glycosyl transferase, group 2 family protein; hypothetical protein complement(4009961..4011121) Clostridium beijerinckii NCIMB 8052 5294635 YP_001310546.1 CDS Cbei_3465 NC_009617.1 4011445 4011993 R KEGG: bcz:BCZK1755 hypothetical protein; hypothetical protein complement(4011445..4011993) Clostridium beijerinckii NCIMB 8052 5294636 YP_001310547.1 CDS Cbei_3466 NC_009617.1 4012194 4013051 D PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: bsu:BG14032 similar to transcriptional regulator (LysR family); LysR family transcriptional regulator 4012194..4013051 Clostridium beijerinckii NCIMB 8052 5294637 YP_001310548.1 CDS Cbei_3467 NC_009617.1 4013357 4014103 R PFAM: regulatory protein, MerR; KEGG: dsy:DSY3460 hypothetical protein; MerR family transcriptional regulator complement(4013357..4014103) Clostridium beijerinckii NCIMB 8052 5294638 YP_001310549.1 CDS Cbei_3468 NC_009617.1 4014404 4014871 R KEGG: cac:CAC3664 predicted flavodoxin; flavodoxin complement(4014404..4014871) Clostridium beijerinckii NCIMB 8052 5294639 YP_001310550.1 CDS Cbei_3469 NC_009617.1 4014936 4015994 R PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: hch:HCH_00674 signal transduction histidine kinase; histidine kinase complement(4014936..4015994) Clostridium beijerinckii NCIMB 8052 5294640 YP_001310551.1 CDS Cbei_3470 NC_009617.1 4015999 4017138 R PFAM: domain of unknown function DUF1745; KEGG: sde:Sde_1899 hypothetical protein; hypothetical protein complement(4015999..4017138) Clostridium beijerinckii NCIMB 8052 5294641 YP_001310552.1 CDS Cbei_3471 NC_009617.1 4017187 4018383 R PFAM: response regulator receiver; Metal-dependent hydrolase HDOD; KEGG: mag:amb2955 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; signal transduction protein complement(4017187..4018383) Clostridium beijerinckii NCIMB 8052 5294642 YP_001310553.1 CDS Cbei_3472 NC_009617.1 4018805 4020070 R PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; FAD-binding 8 domain protein; Ferric reductase domain protein transmembrane component, N-terminal domain; KEGG: cac:CA_P0043 membrane flavodoxin oxidoreductase; oxidoreductase FAD/NAD(P)-binding subunit complement(4018805..4020070) Clostridium beijerinckii NCIMB 8052 5294643 YP_001310554.1 CDS Cbei_3473 NC_009617.1 4020100 4020672 R PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mst:Msp_1513 hypothetical membrane-spanning protein; CDP-alcohol phosphatidyltransferase complement(4020100..4020672) Clostridium beijerinckii NCIMB 8052 5294644 YP_001310555.1 CDS Cbei_3474 NC_009617.1 4020929 4021708 R PFAM: polysaccharide deacetylase; KEGG: cno:NT01CX_1505 predicted xylanase/chitin deacetylase; polysaccharide deacetylase complement(4020929..4021708) Clostridium beijerinckii NCIMB 8052 5294645 YP_001310556.1 CDS Cbei_3475 NC_009617.1 4022038 4023000 R PFAM: Ketopantoate reductase ApbA/PanE, N-terminal domain protein; KEGG: smu:SMU.296 hypothetical protein; ketopantoate reductase ApbA/PanE complement(4022038..4023000) Clostridium beijerinckii NCIMB 8052 5294646 YP_001310557.1 CDS Cbei_3477 NC_009617.1 4023388 4023732 R KEGG: ctc:CTC01436 hypothetical protein; hypothetical protein complement(4023388..4023732) Clostridium beijerinckii NCIMB 8052 5296419 YP_001310558.1 CDS Cbei_3478 NC_009617.1 4024048 4024503 R hypothetical protein complement(4024048..4024503) Clostridium beijerinckii NCIMB 8052 5294648 YP_001310559.1 CDS Cbei_3479 NC_009617.1 4024496 4024702 R PFAM: helix-turn-helix domain protein; KEGG: dsy:DSY1381 hypothetical protein; XRE family transcriptional regulator complement(4024496..4024702) Clostridium beijerinckii NCIMB 8052 5294649 YP_001310560.1 CDS Cbei_3480 NC_009617.1 4025107 4025556 R PFAM: regulatory protein, MarR; KEGG: cac:CAC3418 transcriptional regulator, MarR/EmrR family; MarR family transcriptional regulator complement(4025107..4025556) Clostridium beijerinckii NCIMB 8052 5294650 YP_001310561.1 CDS Cbei_3481 NC_009617.1 4025581 4026210 R PFAM: UbiE/COQ5 methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: cac:CAC3419 S-adenosylmethionine-dependent methyltransferase; type 11 methyltransferase complement(4025581..4026210) Clostridium beijerinckii NCIMB 8052 5294651 YP_001310562.1 CDS Cbei_3482 NC_009617.1 4026662 4027114 R TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; KEGG: cac:CAC2474 N-formylmethionyl-tRNA deformylase; peptide deformylase complement(4026662..4027114) Clostridium beijerinckii NCIMB 8052 5294652 YP_001310563.1 CDS Cbei_3483 NC_009617.1 4027115 4027351 R PFAM: helix-turn-helix domain protein; KEGG: cac:CAC2473 predicted transcriptional regulator; XRE family transcriptional regulator complement(4027115..4027351) Clostridium beijerinckii NCIMB 8052 5294653 YP_001310564.1 CDS Cbei_3484 NC_009617.1 4027509 4028060 R PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: cac:CAC3495 multimeric flavodoxin WrbA family protein; NADPH-dependent FMN reductase complement(4027509..4028060) Clostridium beijerinckii NCIMB 8052 5294654 YP_001310565.1 CDS Cbei_3485 NC_009617.1 4028209 4028529 D PFAM: helix-turn-helix, HxlR type; KEGG: cac:CAC3496 predicted transcriptional regulator; HxlR family transcriptional regulator 4028209..4028529 Clostridium beijerinckii NCIMB 8052 5294655 YP_001310566.1 CDS Cbei_3486 NC_009617.1 4028772 4029593 R PFAM: chemotaxis sensory transducer; KEGG: cac:CAC0741 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(4028772..4029593) Clostridium beijerinckii NCIMB 8052 5294656 YP_001310567.1 CDS Cbei_3488 NC_009617.1 4030613 4031161 R KEGG: cpf:CPF_0995 hypothetical protein; hypothetical protein complement(4030613..4031161) Clostridium beijerinckii NCIMB 8052 5296420 YP_001310568.1 CDS Cbei_3489 NC_009617.1 4031343 4031849 R hypothetical protein complement(4031343..4031849) Clostridium beijerinckii NCIMB 8052 5294658 YP_001310569.1 CDS Cbei_3490 NC_009617.1 4031937 4032242 R hypothetical protein complement(4031937..4032242) Clostridium beijerinckii NCIMB 8052 5294659 YP_001310570.1 CDS Cbei_3491 NC_009617.1 4032397 4033191 R PFAM: protein of unknown function DUF692; KEGG: cac:CAC2465 hypothetical protein; hypothetical protein complement(4032397..4033191) Clostridium beijerinckii NCIMB 8052 5294660 YP_001310571.1 CDS Cbei_3492 NC_009617.1 4033490 4034749 R PFAM: major facilitator superfamily MFS_1; KEGG: bce:BC2673 tetracycline resistance determinant TetV; major facilitator superfamily transporter complement(4033490..4034749) Clostridium beijerinckii NCIMB 8052 5294661 YP_001310572.1 CDS Cbei_3493 NC_009617.1 4034883 4036100 R SMART: regulatory protein, MerR; KEGG: btk:BT9727_2442 possible transcriptional regulator, MerR family; MerR family transcriptional regulator complement(4034883..4036100) Clostridium beijerinckii NCIMB 8052 5294662 YP_001310573.1 CDS Cbei_3494 NC_009617.1 4036329 4037240 R TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: cac:CAC3446 predicted epimerase, PhzC/PhzF homolog; hypothetical protein complement(4036329..4037240) Clostridium beijerinckii NCIMB 8052 5294663 YP_001310574.1 CDS Cbei_3495 NC_009617.1 4037413 4038135 R PFAM: beta-lactamase domain protein; KEGG: ctc:CTC01895 metal dependent hydrolase; beta-lactamase domain-containing protein complement(4037413..4038135) Clostridium beijerinckii NCIMB 8052 5294664 YP_001310575.1 CDS Cbei_3496 NC_009617.1 4038558 4039871 D PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: cpe:CPE0406 probable reticuline oxidase; FAD linked oxidase domain-containing protein 4038558..4039871 Clostridium beijerinckii NCIMB 8052 5294665 YP_001310576.1 CDS Cbei_3497 NC_009617.1 4040005 4040871 R PFAM: ROK family protein; KEGG: cac:CAC1523 fructokinase; ROK family protein complement(4040005..4040871) Clostridium beijerinckii NCIMB 8052 5294666 YP_001310577.1 CDS Cbei_3498 NC_009617.1 4040936 4042048 R KEGG: bad:BAD_1588 hypothetical protein; hypothetical protein complement(4040936..4042048) Clostridium beijerinckii NCIMB 8052 5294667 YP_001310578.1 CDS Cbei_3499 NC_009617.1 4042074 4042913 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_0589 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(4042074..4042913) Clostridium beijerinckii NCIMB 8052 5294668 YP_001310579.1 CDS Cbei_3500 NC_009617.1 4042925 4043803 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_3068 ABC transporter permease, MalFG family; binding-protein-dependent transport system inner membrane protein complement(4042925..4043803) Clostridium beijerinckii NCIMB 8052 5294669 YP_001310580.1 CDS Cbei_3501 NC_009617.1 4043984 4045240 R PFAM: extracellular solute-binding protein, family 1; KEGG: pfu:PF1739 trehalose/maltose binding protein; extracellular solute-binding protein complement(4043984..4045240) Clostridium beijerinckii NCIMB 8052 5294670 YP_001310581.1 CDS Cbei_3502 NC_009617.1 4045454 4047274 D PFAM: histidine kinase internal region; KEGG: ctc:CTC01848 two-component sensor kinase YesM; histidine kinase internal region 4045454..4047274 Clostridium beijerinckii NCIMB 8052 5294671 YP_001310582.1 CDS Cbei_3503 NC_009617.1 4047300 4048895 D PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: cpf:CPF_1111 transcriptional regulator, AraC family; response regulator receiver protein 4047300..4048895 Clostridium beijerinckii NCIMB 8052 5294672 YP_001310583.1 CDS Cbei_3504 NC_009617.1 4049278 4049736 D PFAM: LytTr DNA-binding region; KEGG: lmf:LMOf2365_1005 hypothetical protein; response regulator receiver protein 4049278..4049736 Clostridium beijerinckii NCIMB 8052 5294673 YP_001310584.1 CDS Cbei_3505 NC_009617.1 4050283 4050798 D KEGG: lme:LEUM_0980 hypothetical protein; hypothetical protein 4050283..4050798 Clostridium beijerinckii NCIMB 8052 5294674 YP_001310585.1 CDS Cbei_3506 NC_009617.1 4051061 4051999 R PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: tte:TTE0987 transcriptional regulator; LysR family transcriptional regulator complement(4051061..4051999) Clostridium beijerinckii NCIMB 8052 5294675 YP_001310586.1 CDS Cbei_3507 NC_009617.1 4052087 4053202 D PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: pol:Bpro_3220 phosphonoacetate hydrolase; type I phosphodiesterase/nucleotide pyrophosphatase 4052087..4053202 Clostridium beijerinckii NCIMB 8052 5294676 YP_001310587.1 CDS Cbei_3508 NC_009617.1 4053274 4054236 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: afu:AF0813 phosphoglycerate dehydrogenase (SerA); D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 4053274..4054236 Clostridium beijerinckii NCIMB 8052 5294677 YP_001310588.1 CDS Cbei_3509 NC_009617.1 4054332 4055204 R PFAM: Radical SAM domain protein; KEGG: cac:CAC3492 hypothetical protein; radical SAM domain-containing protein complement(4054332..4055204) Clostridium beijerinckii NCIMB 8052 5294678 YP_001310589.1 CDS Cbei_3510 NC_009617.1 4055263 4055796 R PFAM: protein of unknown function DUF1234; KEGG: sme:SMc00505 hypothetical protein; hypothetical protein complement(4055263..4055796) Clostridium beijerinckii NCIMB 8052 5294679 YP_001310590.1 CDS Cbei_3511 NC_009617.1 4055978 4056388 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(4055978..4056388) Clostridium beijerinckii NCIMB 8052 5294680 YP_001310591.1 CDS Cbei_3512 NC_009617.1 4056725 4057594 R PFAM: aldo/keto reductase; KEGG: cac:CAC1958 predicted aldo/keto reductase, YTBE/YVGN B.subtilis ortholog; 2,5-didehydrogluconate reductase complement(4056725..4057594) Clostridium beijerinckii NCIMB 8052 5294681 YP_001310592.1 CDS Cbei_3513 NC_009617.1 4057667 4058011 R PFAM: ArsR family transcriptional regulator; KEGG: bca:BCE_4519 transcriptional regulator, ArsR family; ArsR family transcriptional regulator complement(4057667..4058011) Clostridium beijerinckii NCIMB 8052 5294682 YP_001310593.1 CDS Cbei_3514 NC_009617.1 4058736 4059494 D KEGG: swo:Swol_2470 hypothetical protein; hypothetical protein 4058736..4059494 Clostridium beijerinckii NCIMB 8052 5294683 YP_001310594.1 CDS Cbei_3515 NC_009617.1 4059746 4060387 R KEGG: dsy:DSY1145 hypothetical protein; chloramphenicol O-acetyltransferase complement(4059746..4060387) Clostridium beijerinckii NCIMB 8052 5294684 YP_001310595.1 CDS Cbei_3516 NC_009617.1 4060539 4063142 R PFAM: pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising protein, mobile region; KEGG: cac:CAC0534 phosphoenolpyruvate synthase (gene pps); phosphoenolpyruvate synthase complement(4060539..4063142) Clostridium beijerinckii NCIMB 8052 5294685 YP_001310596.1 CDS Cbei_3517 NC_009617.1 4063760 4064653 R PFAM: ROK family protein; KEGG: bha:BH0797 glucose kinase; ROK family protein complement(4063760..4064653) Clostridium beijerinckii NCIMB 8052 5294686 YP_001310597.1 CDS Cbei_3518 NC_009617.1 4065119 4066135 R PFAM: Aldose 1-epimerase; KEGG: cac:CAC0697 galactose mutarotase related enzyme; aldose 1-epimerase complement(4065119..4066135) Clostridium beijerinckii NCIMB 8052 5294687 YP_001310598.1 CDS Cbei_3519 NC_009617.1 4066159 4068303 R PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: tte:TTE2591 N-methylhydaintoinase A; hydantoinase/oxoprolinase complement(4066159..4068303) Clostridium beijerinckii NCIMB 8052 5294688 YP_001310599.1 CDS Cbei_3520 NC_009617.1 4068630 4069496 R PFAM: helix-turn-helix protein RpiR; KEGG: ppe:PEPE_0151 transcriptional regulator; RpiR family transcriptional regulator complement(4068630..4069496) Clostridium beijerinckii NCIMB 8052 5294689 YP_001310600.1 CDS Cbei_3521 NC_009617.1 4069663 4070334 R KEGG: tte:TTE2590 hypothetical protein; hypothetical protein complement(4069663..4070334) Clostridium beijerinckii NCIMB 8052 5294690 YP_001310601.1 CDS Cbei_3522 NC_009617.1 4070401 4071693 R PFAM: C4-dicarboxylate anaerobic carrier; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: tte:TTE2594 transporter protein; citrate transporter complement(4070401..4071693) Clostridium beijerinckii NCIMB 8052 5294691 YP_001310602.1 CDS Cbei_3523 NC_009617.1 4071755 4073104 R KEGG: tte:TTE2589 hypothetical protein; hypothetical protein complement(4071755..4073104) Clostridium beijerinckii NCIMB 8052 5294692 YP_001310603.1 CDS Cbei_3524 NC_009617.1 4073299 4075335 R PFAM: chemotaxis sensory transducer; KEGG: tte:TTE2231 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(4073299..4075335) Clostridium beijerinckii NCIMB 8052 5294693 YP_001310604.1 CDS Cbei_3526 NC_009617.1 4076335 4077159 R PFAM: nitroreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cac:CAC2933 ferredoxin-like domain fused to nitroreductase-like domain; 4Fe-4S ferredoxin complement(4076335..4077159) Clostridium beijerinckii NCIMB 8052 5296421 YP_001310605.1 CDS Cbei_3527 NC_009617.1 4077683 4078480 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: reh:H16_B1990 oxidoreductase; short chain dehydrogenase 4077683..4078480 Clostridium beijerinckii NCIMB 8052 5294695 YP_001310606.1 CDS Cbei_3528 NC_009617.1 4078672 4078959 D PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: mmp:MMP0887 hypothetical protein; stress responsive alpha-beta barrel domain-containing protein 4078672..4078959 Clostridium beijerinckii NCIMB 8052 5294696 YP_001310607.1 CDS Cbei_3529 NC_009617.1 4079338 4079841 R TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: cac:CAC3525 uncharacterized conserved protein, YjeB/RRF2 family; BadM/Rrf2 family transcriptional regulator complement(4079338..4079841) Clostridium beijerinckii NCIMB 8052 5294697 YP_001310608.1 CDS Cbei_3530 NC_009617.1 4080046 4080417 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: cac:CAC3526 FMN-binding protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 4080046..4080417 Clostridium beijerinckii NCIMB 8052 5294698 YP_001310609.1 CDS Cbei_3531 NC_009617.1 4080442 4080618 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cac:CAC3527 ferredoxin; 4Fe-4S ferredoxin 4080442..4080618 Clostridium beijerinckii NCIMB 8052 5294699 YP_001310610.1 CDS Cbei_3532 NC_009617.1 4080819 4081835 R catalyzes the reduction of alpha, beta-unsaturated aldehydes and ketones; reduces the nitro group nitroester and nitroaromatic compounds; NADPH dehydrogenase NamA complement(4080819..4081835) Clostridium beijerinckii NCIMB 8052 5294700 YP_001310611.1 CDS Cbei_3533 NC_009617.1 4081981 4082316 D PFAM: helix-turn-helix, HxlR type; KEGG: bce:BC0856 transcriptional regulator, MarR family; HxlR family transcriptional regulator 4081981..4082316 Clostridium beijerinckii NCIMB 8052 5294701 YP_001310612.1 CDS Cbei_3534 NC_009617.1 4082658 4083419 D PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: cpr:CPR_0708 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 4082658..4083419 Clostridium beijerinckii NCIMB 8052 5294702 YP_001310613.1 CDS Cbei_3535 NC_009617.1 4083789 4084421 R PFAM: protein of unknown function DUF1648; KEGG: mla:Mlab_0304 hypothetical protein; hypothetical protein complement(4083789..4084421) Clostridium beijerinckii NCIMB 8052 5294703 YP_001310614.1 CDS Cbei_3536 NC_009617.1 4084408 4084686 R PFAM: ArsR family transcriptional regulator; Helix-turn-helix, type 11 domain protein; KEGG: mla:Mlab_0303 hypothetical protein; ArsR family transcriptional regulator complement(4084408..4084686) Clostridium beijerinckii NCIMB 8052 5294704 YP_001310615.1 CDS Cbei_3537 NC_009617.1 4084846 4085907 R KEGG: ctc:CTC01816 hypothetical protein; hypothetical protein complement(4084846..4085907) Clostridium beijerinckii NCIMB 8052 5294705 YP_001310616.1 CDS Cbei_3538 NC_009617.1 4085897 4086463 R TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4 type 2; KEGG: ctc:CTC01788 RNA polymerase sigma-70 factor; ECF subfamily RNA polymerase sigma-24 factor complement(4085897..4086463) Clostridium beijerinckii NCIMB 8052 5294706 YP_001310617.1 CDS Cbei_3539 NC_009617.1 4086774 4087385 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CAC1476 proline/glycine betaine ABC-type transport system, permease component; glycine/betaine ABC transporter permease complement(4086774..4087385) Clostridium beijerinckii NCIMB 8052 5294707 YP_001310618.1 CDS Cbei_3540 NC_009617.1 4087572 4088315 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC1475 proline/glycine betaine ABC transport system, ATPase component; glycine/betaine ABC transporter ATPase complement(4087572..4088315) Clostridium beijerinckii NCIMB 8052 5294708 YP_001310619.1 CDS Cbei_3541 NC_009617.1 4088338 4089240 R PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: cac:CAC1474 proline/glycine betaine ABC transport system, periplasmic component; glycine/betaine ABC transporter substrate-binding protein complement(4088338..4089240) Clostridium beijerinckii NCIMB 8052 5294709 YP_001310620.1 CDS Cbei_3542 NC_009617.1 4089359 4090009 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CAC1473 proline/glycine betaine ABC-type transport system, permease component; glycine/betaine ABC transporter complement(4089359..4090009) Clostridium beijerinckii NCIMB 8052 5294710 YP_001310621.1 CDS Cbei_3543 NC_009617.1 4090401 4091705 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: cth:Cthe_1842 O-acetylhomoserine/O-acetylserine sulfhydrylase; O-acetylhomoserine aminocarboxypropyltransferase complement(4090401..4091705) Clostridium beijerinckii NCIMB 8052 5294711 YP_001310622.1 CDS Cbei_3544 NC_009617.1 4091870 4092778 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: gme:Gmet_2239 4Fe-4S ferredoxin, iron-sulfur binding protein; 4Fe-4S ferredoxin complement(4091870..4092778) Clostridium beijerinckii NCIMB 8052 5294712 YP_001310623.1 CDS Cbei_3545 NC_009617.1 4093294 4094217 D PFAM: aminoglycoside phosphotransferase; KEGG: dsy:DSY3609 hypothetical protein; aminoglycoside phosphotransferase 4093294..4094217 Clostridium beijerinckii NCIMB 8052 5294713 YP_001310624.1 CDS Cbei_3546 NC_009617.1 4094403 4095263 R PFAM: conserved hypothetical protein CHP02464; KEGG: cpr:CPR_0151 protein T24A6.7; hypothetical protein complement(4094403..4095263) Clostridium beijerinckii NCIMB 8052 5294714 YP_001310625.1 CDS Cbei_3547 NC_009617.1 4095618 4096481 R PFAM: protein of unknown function DUF89; KEGG: tma:TM0176 hypothetical protein; hypothetical protein complement(4095618..4096481) Clostridium beijerinckii NCIMB 8052 5294715 YP_001310626.1 CDS Cbei_3548 NC_009617.1 4096732 4098057 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cth:Cthe_2566 radical SAM; radical SAM domain-containing protein complement(4096732..4098057) Clostridium beijerinckii NCIMB 8052 5294716 YP_001310627.1 CDS Cbei_3549 NC_009617.1 4098470 4098676 D PFAM: helix-turn-helix domain protein; KEGG: dsy:DSY0155 hypothetical protein; XRE family transcriptional regulator 4098470..4098676 Clostridium beijerinckii NCIMB 8052 5294717 YP_001310628.1 CDS Cbei_3550 NC_009617.1 4098673 4099104 D KEGG: dsy:DSY0156 hypothetical protein; hypothetical protein 4098673..4099104 Clostridium beijerinckii NCIMB 8052 5294718 YP_001310629.1 CDS Cbei_3551 NC_009617.1 4099319 4100464 R KEGG: ctc:CTC00840 hypothetical protein; hypothetical protein complement(4099319..4100464) Clostridium beijerinckii NCIMB 8052 5294719 YP_001310630.1 CDS Cbei_3552 NC_009617.1 4100633 4101007 R KEGG: dsy:DSY1203 hypothetical protein; hypothetical protein complement(4100633..4101007) Clostridium beijerinckii NCIMB 8052 5294720 YP_001310631.1 CDS Cbei_3553 NC_009617.1 4101031 4102050 R KEGG: cth:Cthe_0028 uncharacterized protein, YcgL-like protein; hypothetical protein complement(4101031..4102050) Clostridium beijerinckii NCIMB 8052 5294721 YP_001310632.1 CDS Cbei_3554 NC_009617.1 4102047 4102826 R KEGG: bce:BC0397 hypothetical cytosolic protein; hypothetical protein complement(4102047..4102826) Clostridium beijerinckii NCIMB 8052 5294722 YP_001310633.1 CDS Cbei_3555 NC_009617.1 4102925 4103278 R hypothetical protein complement(4102925..4103278) Clostridium beijerinckii NCIMB 8052 5294723 YP_001310634.1 CDS Cbei_3556 NC_009617.1 4103383 4104606 R PFAM: protein of unknown function UPF0027; KEGG: cth:Cthe_0250 protein of unknown function UPF0027; hypothetical protein complement(4103383..4104606) Clostridium beijerinckii NCIMB 8052 5294724 YP_001310635.1 CDS Cbei_3557 NC_009617.1 4104775 4106235 R PFAM: TROVE domain protein; KEGG: cth:Cthe_2764 TROVE domain containing protein; TROVE domain-containing protein complement(4104775..4106235) Clostridium beijerinckii NCIMB 8052 5294725 YP_001310636.1 CDS Cbei_3558 NC_009617.1 4107261 4108274 R KEGG: cth:Cthe_2763 hypothetical protein; hypothetical protein complement(4107261..4108274) Clostridium beijerinckii NCIMB 8052 5294726 YP_001310637.1 CDS Cbei_3559 NC_009617.1 4108258 4109562 R KEGG: cth:Cthe_2762 transcriptional regulator-like protein; transcriptional regulator-like protein complement(4108258..4109562) Clostridium beijerinckii NCIMB 8052 5294727 YP_001310638.1 CDS Cbei_3560 NC_009617.1 4109590 4110108 R PFAM: GCN5-related N-acetyltransferase; KEGG: bth:BT_2381 acetyltransferase; N-acetyltransferase GCN5 complement(4109590..4110108) Clostridium beijerinckii NCIMB 8052 5294728 YP_001310639.1 CDS Cbei_3561 NC_009617.1 4110466 4111638 R Catalyzes the formylation of AICAR with 10-formyl-tetrahydrofolate to yield FAICAR and tetrahydrofolate; 5-aminoimidazole-4-carboxamide ribonucleotide transformylase complement(4110466..4111638) Clostridium beijerinckii NCIMB 8052 5294729 YP_001310640.1 CDS Cbei_3562 NC_009617.1 4112037 4113233 R PFAM: transposase IS116/IS110/IS902 family protein; KEGG: lac:LBA1723 transposase; transposase IS116/IS110/IS902 family protein complement(4112037..4113233) Clostridium beijerinckii NCIMB 8052 5294730 YP_001310641.1 CDS Cbei_3563 NC_009617.1 4113563 4114012 R An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin complement(4113563..4114012) Clostridium beijerinckii NCIMB 8052 5294731 YP_001310642.1 CDS Cbei_3564 NC_009617.1 4114283 4115545 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cpf:CPF_1057 sensor histidine kinase; histidine kinase complement(4114283..4115545) Clostridium beijerinckii NCIMB 8052 5294732 YP_001310643.1 CDS Cbei_3565 NC_009617.1 4115538 4116218 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cpf:CPF_1056 DNA-binding response regulator; two component transcriptional regulator complement(4115538..4116218) Clostridium beijerinckii NCIMB 8052 5294733 YP_001310644.1 CDS Cbei_3566 NC_009617.1 4116211 4116765 R KEGG: cpf:CPF_1055 UBA/Ts-N domain protein; UBA/Ts-N domain-containing protein complement(4116211..4116765) Clostridium beijerinckii NCIMB 8052 5294734 YP_001310645.1 CDS Cbei_3567 NC_009617.1 4117027 4117569 R KEGG: cpf:CPF_1054 UBA/Ts-N domain protein; UBA/Ts-N domain-containing protein complement(4117027..4117569) Clostridium beijerinckii NCIMB 8052 5294735 YP_001310646.1 CDS Cbei_3568 NC_009617.1 4117694 4118986 R KEGG: ctc:CTC01787 hypothetical protein; hypothetical protein complement(4117694..4118986) Clostridium beijerinckii NCIMB 8052 5294736 YP_001310647.1 CDS Cbei_3569 NC_009617.1 4118991 4119548 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 complement(4118991..4119548) Clostridium beijerinckii NCIMB 8052 5294737 YP_001310648.1 CDS Cbei_3570 NC_009617.1 4119774 4120868 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FMN-binding domain protein; KEGG: cac:CAC2762 polyferredoxin; FMN-binding domain-containing protein complement(4119774..4120868) Clostridium beijerinckii NCIMB 8052 5294738 YP_001310649.1 CDS Cbei_3571 NC_009617.1 4120890 4122092 R PFAM: FMN-binding domain protein; KEGG: dsy:DSY4227 hypothetical protein; FMN-binding domain-containing protein complement(4120890..4122092) Clostridium beijerinckii NCIMB 8052 5294739 YP_001310650.1 CDS Cbei_3572 NC_009617.1 4122500 4123456 R PFAM: ApbE family lipoprotein; KEGG: cac:CAC2766 thiamine biosynthesis lipoprotein ApbE; ApbE family lipoprotein complement(4122500..4123456) Clostridium beijerinckii NCIMB 8052 5294740 YP_001310651.1 CDS Cbei_3573 NC_009617.1 4123771 4124103 D PFAM: transcriptional regulator PadR family protein; KEGG: cpe:CPE0704 30S ribosomal protein homolog; PadR-like family transcriptional regulator 4123771..4124103 Clostridium beijerinckii NCIMB 8052 5294741 YP_001310652.1 CDS Cbei_3574 NC_009617.1 4124107 4124694 D KEGG: cpf:CPF_0700 hypothetical protein; hypothetical protein 4124107..4124694 Clostridium beijerinckii NCIMB 8052 5294742 YP_001310653.1 CDS Cbei_3575 NC_009617.1 4125457 4126749 R KEGG: ctc:CTC01787 hypothetical protein; hypothetical protein complement(4125457..4126749) Clostridium beijerinckii NCIMB 8052 5294743 YP_001310654.1 CDS Cbei_3576 NC_009617.1 4126754 4127311 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 complement(4126754..4127311) Clostridium beijerinckii NCIMB 8052 5294744 YP_001310655.1 CDS Cbei_3577 NC_009617.1 4127530 4128099 R PFAM: regulatory protein, TetR; KEGG: cac:CAC0201 transcriptional regulators, AcrR family; TetR family transcriptional regulator complement(4127530..4128099) Clostridium beijerinckii NCIMB 8052 5294745 YP_001310656.1 CDS Cbei_3578 NC_009617.1 4128253 4128762 D KEGG: cac:CAC0722 predicted membrane protein; CF-9 family; CF-9 family membrane protein 4128253..4128762 Clostridium beijerinckii NCIMB 8052 5294746 YP_001310657.1 CDS Cbei_3579 NC_009617.1 4129095 4130051 D PFAM: helix-turn-helix- domain containing protein, AraC type; AraC-type transcriptional regulator domain protein; KEGG: dge:Dgeo_2236 transcriptional regulator, AraC family; AraC family transcriptional regulator 4129095..4130051 Clostridium beijerinckii NCIMB 8052 5294747 YP_001310658.1 CDS Cbei_3580 NC_009617.1 4130397 4130957 D PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: mac:MA0445 iron-sulfur flavoprotein; NADPH-dependent FMN reductase 4130397..4130957 Clostridium beijerinckii NCIMB 8052 5294748 YP_001310659.1 CDS Cbei_3581 NC_009617.1 4131348 4131734 R KEGG: cpf:CPF_0183 hypothetical protein; hypothetical protein complement(4131348..4131734) Clostridium beijerinckii NCIMB 8052 5294749 YP_001310660.1 CDS Cbei_3582 NC_009617.1 4131887 4132975 R PFAM: cell wall binding repeat-containing protein; KEGG: tte:TTE1079 beta-lactamase regulatory protein 1; cell wall binding repeat-containing protein complement(4131887..4132975) Clostridium beijerinckii NCIMB 8052 5294750 YP_001310661.1 CDS Cbei_3583 NC_009617.1 4133173 4134141 R PFAM: alpha/beta hydrolase fold; KEGG: dsy:DSY1555 hypothetical protein; alpha/beta fold family hydrolase complement(4133173..4134141) Clostridium beijerinckii NCIMB 8052 5294751 YP_001310662.1 CDS Cbei_3584 NC_009617.1 4134191 4135228 R PFAM: alpha/beta hydrolase fold; KEGG: btl:BALH_2130 alpha/beta hydrolase; alpha/beta fold family hydrolase complement(4134191..4135228) Clostridium beijerinckii NCIMB 8052 5294752 YP_001310663.1 CDS Cbei_3585 NC_009617.1 4135308 4135796 R hypothetical protein complement(4135308..4135796) Clostridium beijerinckii NCIMB 8052 5294753 YP_001310664.1 CDS Cbei_3587 NC_009617.1 4136673 4137446 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cpr:CPR_2063 polyferredoxin; 4Fe-4S ferredoxin complement(4136673..4137446) Clostridium beijerinckii NCIMB 8052 5296422 YP_001310665.1 CDS Cbei_3588 NC_009617.1 4138144 4138458 R hypothetical protein complement(4138144..4138458) Clostridium beijerinckii NCIMB 8052 5294755 YP_001310666.1 CDS Cbei_3589 NC_009617.1 4138615 4139508 R PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: cac:CAC3360 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(4138615..4139508) Clostridium beijerinckii NCIMB 8052 5294756 YP_001310667.1 CDS Cbei_3590 NC_009617.1 4139798 4140358 D PFAM: nitroreductase; KEGG: bth:BT_1148 NADH dehydrogenase/NAD(P)H nitroreductase; nitroreductase 4139798..4140358 Clostridium beijerinckii NCIMB 8052 5294757 YP_001310668.1 CDS Cbei_3591 NC_009617.1 4141544 4143070 R TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: tte:TTE2372 lysyl-tRNA synthetase class II; lysyl-tRNA synthetase complement(4141544..4143070) Clostridium beijerinckii NCIMB 8052 5294758 YP_001310669.1 CDS Cbei_3592 NC_009617.1 4143716 4144672 R PFAM: Ketopantoate reductase ApbA/PanE, N-terminal domain protein; KEGG: smu:SMU.296 hypothetical protein; ketopantoate reductase ApbA/PanE complement(4143716..4144672) Clostridium beijerinckii NCIMB 8052 5294759 YP_001310670.1 CDS Cbei_3593 NC_009617.1 4144832 4145398 D KEGG: bcl:ABC0634 transcriptional regulator, TetR family; TetR family transcriptional regulator 4144832..4145398 Clostridium beijerinckii NCIMB 8052 5294760 YP_001310671.1 CDS Cbei_3595 NC_009617.1 4145835 4146356 R PFAM: transcriptional regulator PadR family protein; KEGG: cac:CAC0530 hypothetical protein; PadR-like family transcriptional regulator complement(4145835..4146356) Clostridium beijerinckii NCIMB 8052 5296423 YP_001310672.1 CDS Cbei_3596 NC_009617.1 4146420 4147268 R PFAM: protein of unknown function DUF303, acetylesterase KEGG: cac:CAC0529 acetylxylan esterase related enzyme; hypothetical protein complement(4146420..4147268) Clostridium beijerinckii NCIMB 8052 5294762 YP_001310673.1 CDS Cbei_3597 NC_009617.1 4147707 4148279 R PFAM: flavin reductase domain protein, FMN-binding; KEGG: mac:MA2295 flavoredoxin Flr; flavin reductase domain-containing protein complement(4147707..4148279) Clostridium beijerinckii NCIMB 8052 5294763 YP_001310674.1 CDS Cbei_3598 NC_009617.1 4148518 4148910 D PFAM: regulatory protein, MerR; KEGG: lbr:LVIS_2182 predicted transcriptional regulator; MerR family transcriptional regulator 4148518..4148910 Clostridium beijerinckii NCIMB 8052 5294764 YP_001310675.1 CDS Cbei_3599 NC_009617.1 4149028 4149831 R TIGRFAM: glutamate racemase; PFAM: Asp/Glu racemase; KEGG: bsu:BG12306 glutamate racemase; glutamate racemase complement(4149028..4149831) Clostridium beijerinckii NCIMB 8052 5294765 YP_001310676.1 CDS Cbei_3600 NC_009617.1 4150243 4151085 D PFAM: nitroreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cac:CAC2933 ferredoxin-like domain fused to nitroreductase-like domain; 4Fe-4S ferredoxin 4150243..4151085 Clostridium beijerinckii NCIMB 8052 5294766 YP_001310677.1 CDS Cbei_3601 NC_009617.1 4151196 4151777 R PFAM: regulatory protein, TetR; KEGG: bja:bll5689 transcriptional regulatory protein; TetR family transcriptional regulator complement(4151196..4151777) Clostridium beijerinckii NCIMB 8052 5294767 YP_001310678.1 CDS Cbei_3602 NC_009617.1 4151858 4152397 R PFAM: GCN5-related N-acetyltransferase; KEGG: rru:Rru_A2227 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(4151858..4152397) Clostridium beijerinckii NCIMB 8052 5294768 YP_001310679.1 CDS Cbei_3603 NC_009617.1 4152786 4153472 D PFAM: protein of unknown function DUF421; KEGG: cac:CAC1521 uncharacterized membrane protein, YetF/YdfS/YkjA/YrbG/YdfR B.subtilis ortholog; hypothetical protein 4152786..4153472 Clostridium beijerinckii NCIMB 8052 5294769 YP_001310680.1 CDS Cbei_3604 NC_009617.1 4153650 4154000 R KEGG: bcl:ABC1987 hypothetical protein; hypothetical protein complement(4153650..4154000) Clostridium beijerinckii NCIMB 8052 5294770 YP_001310681.1 CDS Cbei_3605 NC_009617.1 4154089 4154367 R hypothetical protein complement(4154089..4154367) Clostridium beijerinckii NCIMB 8052 5294771 YP_001310682.1 CDS Cbei_3606 NC_009617.1 4154639 4155175 R PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY1008 hypothetical protein; N-acetyltransferase GCN5 complement(4154639..4155175) Clostridium beijerinckii NCIMB 8052 5294772 YP_001310683.1 CDS Cbei_3607 NC_009617.1 4155432 4156370 R PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: lmo:lmo0364 hypothetical protein; helix-turn-helix, type 11 domain-containing protein complement(4155432..4156370) Clostridium beijerinckii NCIMB 8052 5294773 YP_001310684.1 CDS Cbei_3608 NC_009617.1 4156646 4157773 D PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: bca:BCE_3147 Tn554-related, transposase A; phage integrase family protein 4156646..4157773 Clostridium beijerinckii NCIMB 8052 5294774 YP_001310685.1 CDS Cbei_3609 NC_009617.1 4157775 4159739 D PFAM: phage integrase family protein; KEGG: sep:SE1612 transposition regulatory protein TnpB; phage integrase family protein 4157775..4159739 Clostridium beijerinckii NCIMB 8052 5294775 YP_001310686.1 CDS Cbei_3610 NC_009617.1 4159741 4160115 D KEGG: bca:BCE_A0002 Tn554-related, transposase C; Tn554-related, transposase C 4159741..4160115 Clostridium beijerinckii NCIMB 8052 5294776 YP_001310687.1 CDS Cbei_3611 NC_009617.1 4160173 4160871 D hypothetical protein 4160173..4160871 Clostridium beijerinckii NCIMB 8052 5294777 YP_001310688.1 CDS Cbei_3612 NC_009617.1 4160975 4161427 D KEGG: bce:BC3594 PhnB protein; PhnB protein 4160975..4161427 Clostridium beijerinckii NCIMB 8052 5294778 YP_001310689.1 CDS Cbei_3613 NC_009617.1 4161618 4161827 R KEGG: pde:Pden_0118 hypothetical protein; hypothetical protein complement(4161618..4161827) Clostridium beijerinckii NCIMB 8052 5294779 YP_001310690.1 CDS Cbei_3614 NC_009617.1 4161878 4162765 R KEGG: bld:BLi00263 hypothetical protein; hypothetical protein complement(4161878..4162765) Clostridium beijerinckii NCIMB 8052 5294780 YP_001310691.1 CDS Cbei_3615 NC_009617.1 4163300 4164169 R TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; SEC-C motif domain protein; KEGG: cpe:CPE1382 probable methionine aminopeptidase; methionine aminopeptidase complement(4163300..4164169) Clostridium beijerinckii NCIMB 8052 5294781 YP_001310692.1 CDS Cbei_3616 NC_009617.1 4164190 4164870 R PFAM: helix-turn-helix domain protein; KEGG: atc:AGR_C_2728 hypothetical protein; XRE family transcriptional regulator complement(4164190..4164870) Clostridium beijerinckii NCIMB 8052 5294782 YP_001310693.1 CDS Cbei_3617 NC_009617.1 4165414 4166439 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility C-terminal domain; KEGG: cac:CAC3503 nucleoside-diphosphate-sugar epimerase; NAD-dependent epimerase/dehydratase complement(4165414..4166439) Clostridium beijerinckii NCIMB 8052 5294783 YP_001310694.1 CDS Cbei_3618 NC_009617.1 4166555 4167076 D PFAM: regulatory protein, TetR; KEGG: cac:CAC3504 transcriptional regulator, AcrR family; TetR family transcriptional regulator 4166555..4167076 Clostridium beijerinckii NCIMB 8052 5294784 YP_001310695.1 CDS Cbei_3619 NC_009617.1 4167175 4167741 R PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: cac:CAC3495 multimeric flavodoxin WrbA family protein; NAD(P)H dehydrogenase (quinone) complement(4167175..4167741) Clostridium beijerinckii NCIMB 8052 5294785 YP_001310696.1 CDS Cbei_3620 NC_009617.1 4167898 4168314 D PFAM: helix-turn-helix, HxlR type; KEGG: dsy:DSY0078 hypothetical protein; HxlR family transcriptional regulator 4167898..4168314 Clostridium beijerinckii NCIMB 8052 5294786 YP_001310697.1 CDS Cbei_3621 NC_009617.1 4168422 4169240 R KEGG: ctc:CTC00617 hypothetical protein; hypothetical protein complement(4168422..4169240) Clostridium beijerinckii NCIMB 8052 5294787 YP_001310698.1 CDS Cbei_3622 NC_009617.1 4169233 4169814 R TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sth:STH169 RNA polymerase ECF-type sigma factor; ECF subfamily RNA polymerase sigma-24 factor complement(4169233..4169814) Clostridium beijerinckii NCIMB 8052 5294788 YP_001310699.1 CDS Cbei_3623 NC_009617.1 4170184 4171416 D hypothetical protein 4170184..4171416 Clostridium beijerinckii NCIMB 8052 5294789 YP_001310700.1 CDS Cbei_3624 NC_009617.1 4171483 4172727 D KEGG: pfa:MAL13P1.145 hypothetical protein; hypothetical protein 4171483..4172727 Clostridium beijerinckii NCIMB 8052 5294790 YP_001310701.1 CDS Cbei_3625 NC_009617.1 4172987 4174981 R PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC00924 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(4172987..4174981) Clostridium beijerinckii NCIMB 8052 5294791 YP_001310702.1 CDS Cbei_3626 NC_009617.1 4175487 4176338 R KEGG: dsy:DSY1946 hypothetical protein; hypothetical protein complement(4175487..4176338) Clostridium beijerinckii NCIMB 8052 5294792 YP_001310703.1 CDS Cbei_3627 NC_009617.1 4176356 4176718 R KEGG: dsy:DSY4483 hypothetical protein; hypothetical protein complement(4176356..4176718) Clostridium beijerinckii NCIMB 8052 5294793 YP_001310704.1 CDS Cbei_3628 NC_009617.1 4176734 4177222 R TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein, MerR; KEGG: cpf:CPF_1346 transcriptional regulator, MerR family; DNA binding domain-containing protein complement(4176734..4177222) Clostridium beijerinckii NCIMB 8052 5294794 YP_001310705.1 CDS Cbei_3629 NC_009617.1 4177709 4178740 R KEGG: cac:CA_P0077 uncharacterized Fe-S protein; hypothetical protein complement(4177709..4178740) Clostridium beijerinckii NCIMB 8052 5294795 YP_001310706.1 CDS Cbei_3630 NC_009617.1 4178927 4180105 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase complement(4178927..4180105) Clostridium beijerinckii NCIMB 8052 5294796 YP_001310707.1 CDS Cbei_3631 NC_009617.1 4180344 4181234 D PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: stm:STM2644 transcriptional regulator; LysR family transcriptional regulator 4180344..4181234 Clostridium beijerinckii NCIMB 8052 5294797 YP_001310708.1 CDS Cbei_3632 NC_009617.1 4181745 4182101 R hypothetical protein complement(4181745..4182101) Clostridium beijerinckii NCIMB 8052 5294798 YP_001310709.1 CDS Cbei_3633 NC_009617.1 4182705 4183469 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bcl:ABC1107 short-chain alcohol dehydrogenase; short-chain dehydrogenase/reductase SDR complement(4182705..4183469) Clostridium beijerinckii NCIMB 8052 5294799 YP_001310710.1 CDS Cbei_3634 NC_009617.1 4183699 4184121 D PFAM: regulatory protein, MerR; KEGG: lmf:LMOf2365_1497 transcriptional regulator, MerR family; MerR family transcriptional regulator 4183699..4184121 Clostridium beijerinckii NCIMB 8052 5294800 YP_001310711.1 CDS Cbei_3635 NC_009617.1 4184663 4185844 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: cno:NT01CX_1345 cation efflux family protein; cation diffusion facilitator family transporter complement(4184663..4185844) Clostridium beijerinckii NCIMB 8052 5294801 YP_001310712.1 CDS Cbei_3636 NC_009617.1 4186149 4187510 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cac:CAC2485 predicted membane protein, probable cation efflux pump (MDR-type); MATE efflux family protein complement(4186149..4187510) Clostridium beijerinckii NCIMB 8052 5294802 YP_001310713.1 CDS Cbei_3637 NC_009617.1 4187595 4188032 R PFAM: regulatory protein, MarR; KEGG: cac:CAC2486 transcriptional regulator, MarR/EmrR family; MarR family transcriptional regulator complement(4187595..4188032) Clostridium beijerinckii NCIMB 8052 5294803 YP_001310714.1 CDS Cbei_3638 NC_009617.1 4188537 4189139 D PFAM: Lytic transglycosylase, catalytic; lytic transglycosylase 4188537..4189139 Clostridium beijerinckii NCIMB 8052 5294804 YP_001310715.1 CDS Cbei_3639 NC_009617.1 4189643 4190167 R PFAM: VanZ family protein; KEGG: ctc:CTC01417 hypothetical protein; VanZ family protein complement(4189643..4190167) Clostridium beijerinckii NCIMB 8052 5294805 YP_001310716.1 CDS Cbei_3641 NC_009617.1 4191337 4192638 R PFAM: transposase IS116/IS110/IS902 family protein; KEGG: dsy:DSY3551 hypothetical protein; transposase IS116/IS110/IS902 family protein complement(4191337..4192638) Clostridium beijerinckii NCIMB 8052 5296424 YP_001310717.1 CDS Cbei_3642 NC_009617.1 4193060 4193908 D catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 4193060..4193908 Clostridium beijerinckii NCIMB 8052 5294807 YP_001310718.1 CDS Cbei_3643 NC_009617.1 4194069 4194875 R PFAM: nitroreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cac:CAC3483 nitroreductase fused to ferredoxin domain; nitroreductase complement(4194069..4194875) Clostridium beijerinckii NCIMB 8052 5294808 YP_001310719.1 CDS Cbei_3644 NC_009617.1 4195274 4195852 R PFAM: regulatory protein, TetR; KEGG: lsa:LSA0965 transcriptional regulator, TerR family; TetR family transcriptional regulator complement(4195274..4195852) Clostridium beijerinckii NCIMB 8052 5294809 YP_001310720.1 CDS Cbei_3645 NC_009617.1 4196193 4196951 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mla:Mlab_0618 hypothetical protein; 4Fe-4S ferredoxin complement(4196193..4196951) Clostridium beijerinckii NCIMB 8052 5294810 YP_001310721.1 CDS Cbei_3646 NC_009617.1 4197068 4197634 D PFAM: regulatory protein, TetR; KEGG: cac:CAC0723 transcriptional regulator, AcrR family; TetR family transcriptional regulator 4197068..4197634 Clostridium beijerinckii NCIMB 8052 5294811 YP_001310722.1 CDS Cbei_3647 NC_009617.1 4197895 4198350 R KEGG: cac:CAC2505 uncharacterized membrane protein, YXJN B.subtilis homolog; hypothetical protein complement(4197895..4198350) Clostridium beijerinckii NCIMB 8052 5294812 YP_001310723.1 CDS Cbei_3648 NC_009617.1 4198598 4199173 R PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: aba:Acid345_1952 isoprenylcysteine carboxyl methyltransferase; isoprenylcysteine carboxyl methyltransferase complement(4198598..4199173) Clostridium beijerinckii NCIMB 8052 5294813 YP_001310724.1 CDS Cbei_3649 NC_009617.1 4199200 4199667 R PFAM: regulatory protein, MarR; KEGG: lmo:lmo0840 hypothetical protein; MarR family transcriptional regulator complement(4199200..4199667) Clostridium beijerinckii NCIMB 8052 5294814 YP_001310725.1 CDS Cbei_3650 NC_009617.1 4199973 4200572 R PFAM: regulatory protein, TetR; KEGG: ava:Ava_2488 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(4199973..4200572) Clostridium beijerinckii NCIMB 8052 5294815 YP_001310726.1 CDS Cbei_3651 NC_009617.1 4200871 4202103 D PFAM: major facilitator superfamily MFS_1; KEGG: pub:SAR11_0830 probable MFS transporter (major facilitator superfamily); major facilitator superfamily transporter 4200871..4202103 Clostridium beijerinckii NCIMB 8052 5294816 YP_001310727.1 CDS Cbei_3652 NC_009617.1 4202429 4203271 R PFAM: extracellular solute-binding protein, family 3; KEGG: bja:blr2224 ABC transporter amino acid-binding protein; extracellular solute-binding protein complement(4202429..4203271) Clostridium beijerinckii NCIMB 8052 5294817 YP_001310728.1 CDS Cbei_3653 NC_009617.1 4203584 4204018 R hypothetical protein complement(4203584..4204018) Clostridium beijerinckii NCIMB 8052 5294818 YP_001310729.1 CDS Cbei_3654 NC_009617.1 4204031 4204579 R PFAM: LytTr DNA-binding region; KEGG: lmf:LMOf2365_1005 hypothetical protein; response regulator receiver protein complement(4204031..4204579) Clostridium beijerinckii NCIMB 8052 5294819 YP_001310730.1 CDS Cbei_3655 NC_009617.1 4204854 4205384 R KEGG: rpa:RPA2585 hypothetical protein; hypothetical protein complement(4204854..4205384) Clostridium beijerinckii NCIMB 8052 5294820 YP_001310731.1 CDS Cbei_3656 NC_009617.1 4205377 4206759 R KEGG: pca:Pcar_2448 predicted iron-sulfur flavoprotein; iron-sulfur flavoprotein complement(4205377..4206759) Clostridium beijerinckii NCIMB 8052 5294821 YP_001310732.1 CDS Cbei_3658 NC_009617.1 4208488 4209312 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: ade:Adeh_1435 protein of unknown function DUF6, transmembrane; hypothetical protein 4208488..4209312 Clostridium beijerinckii NCIMB 8052 5296425 YP_001310733.1 CDS Cbei_3659 NC_009617.1 4209709 4210560 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; KEGG: llm:llmg_0247 UDP-glucose 4-epimerase; NAD-dependent epimerase/dehydratase complement(4209709..4210560) Clostridium beijerinckii NCIMB 8052 5294823 YP_001310734.1 CDS Cbei_3660 NC_009617.1 4210701 4211534 D SMART: helix-turn-helix domain protein; KEGG: rle:RL4049 hypothetical protein; helix-turn-helix domain-containing protein 4210701..4211534 Clostridium beijerinckii NCIMB 8052 5294824 YP_001310735.1 CDS Cbei_3661 NC_009617.1 4211860 4212504 R PFAM: 60 kDa inner membrane insertion protein; KEGG: hpa:HPAG1_1376 60 kDa inner-membrane protein; 60 kDa inner membrane insertion protein complement(4211860..4212504) Clostridium beijerinckii NCIMB 8052 5294825 YP_001310736.1 CDS Cbei_3662 NC_009617.1 4213487 4214590 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: btk:BT9727_2340 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase complement(4213487..4214590) Clostridium beijerinckii NCIMB 8052 5294826 YP_001310737.1 CDS Cbei_3663 NC_009617.1 4214580 4215269 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bcz:BCZK2302 DNA-binding response regulator; two component transcriptional regulator complement(4214580..4215269) Clostridium beijerinckii NCIMB 8052 5294827 YP_001310738.1 CDS Cbei_3664 NC_009617.1 4215290 4215979 R PFAM: peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin; KEGG: bld:BLi02284 YodJ; peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin complement(4215290..4215979) Clostridium beijerinckii NCIMB 8052 5294828 YP_001310739.1 CDS Cbei_3665 NC_009617.1 4216281 4217162 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: ctc:CTC00159 sensory transduction protein kinase; histidine kinase complement(4216281..4217162) Clostridium beijerinckii NCIMB 8052 5294829 YP_001310740.1 CDS Cbei_3666 NC_009617.1 4217187 4217921 R hypothetical protein complement(4217187..4217921) Clostridium beijerinckii NCIMB 8052 5294830 YP_001310741.1 CDS Cbei_3667 NC_009617.1 4217937 4218662 R KEGG: cac:CAC0862 transmembrane protein; hypothetical protein complement(4217937..4218662) Clostridium beijerinckii NCIMB 8052 5294831 YP_001310742.1 CDS Cbei_3668 NC_009617.1 4218655 4219575 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC0861 ABC-type multidrug transport system, ATPase component; multidrug ABC transporter ATPase complement(4218655..4219575) Clostridium beijerinckii NCIMB 8052 5294832 YP_001310743.1 CDS Cbei_3669 NC_009617.1 4219722 4220402 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cac:CAC0860 two-component response regulator; two component transcriptional regulator complement(4219722..4220402) Clostridium beijerinckii NCIMB 8052 5294833 YP_001310744.1 CDS Cbei_3670 NC_009617.1 4221632 4222546 R PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: mta:Moth_2231 RNA-directed DNA polymerase (reverse transcriptase); RNA-directed DNA polymerase complement(4221632..4222546) Clostridium beijerinckii NCIMB 8052 5294834 YP_001310745.1 CDS Cbei_3671 NC_009617.1 4223140 4225137 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC1387 membrane associated chemotaxis sensory transducer protein (MSP domain and HamP domain); methyl-accepting chemotaxis sensory transducer complement(4223140..4225137) Clostridium beijerinckii NCIMB 8052 5294835 YP_001310746.1 CDS Cbei_3672 NC_009617.1 4225435 4227900 R KEGG: ctc:CTC01609 hypothetical protein; dual specificity protein phosphatase complement(4225435..4227900) Clostridium beijerinckii NCIMB 8052 5294836 YP_001310747.1 CDS Cbei_3673 NC_009617.1 4228426 4229418 D PFAM: Choloylglycine hydrolase; KEGG: bld:BLi04217 YxeI; penicillin amidase 4228426..4229418 Clostridium beijerinckii NCIMB 8052 5294837 YP_001310748.1 CDS Cbei_3674 NC_009617.1 4229636 4230754 R KEGG: bca:BCE_1830 hypothetical protein; hypothetical protein complement(4229636..4230754) Clostridium beijerinckii NCIMB 8052 5294838 YP_001310749.1 CDS Cbei_3675 NC_009617.1 4230756 4231301 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 complement(4230756..4231301) Clostridium beijerinckii NCIMB 8052 5294839 YP_001310750.1 CDS Cbei_3676 NC_009617.1 4231794 4232018 D hypothetical protein 4231794..4232018 Clostridium beijerinckii NCIMB 8052 5294840 YP_001310751.1 CDS Cbei_3677 NC_009617.1 4232146 4232364 D KEGG: chy:CHY_0145 hypothetical protein; hypothetical protein 4232146..4232364 Clostridium beijerinckii NCIMB 8052 5294841 YP_001310752.1 CDS Cbei_3678 NC_009617.1 4232500 4232919 D KEGG: ctc:CTC01989 transposase-related protein; transposase-like protein 4232500..4232919 Clostridium beijerinckii NCIMB 8052 5294842 YP_001310753.1 CDS Cbei_3679 NC_009617.1 4232922 4233830 D PFAM: Integrase, catalytic region; KEGG: ctc:CTC01990 transposase; integrase catalytic subunit 4232922..4233830 Clostridium beijerinckii NCIMB 8052 5294843 YP_001310754.1 CDS Cbei_3680 NC_009617.1 4234185 4234499 D hypothetical protein 4234185..4234499 Clostridium beijerinckii NCIMB 8052 5294844 YP_001310755.1 CDS Cbei_3681 NC_009617.1 4234556 4234873 D hypothetical protein 4234556..4234873 Clostridium beijerinckii NCIMB 8052 5294845 YP_001310756.1 CDS Cbei_3682 NC_009617.1 4235443 4236462 R KEGG: pfa:MAL13P1.323 hypothetical protein; hypothetical protein complement(4235443..4236462) Clostridium beijerinckii NCIMB 8052 5294846 YP_001310757.1 CDS Cbei_3683 NC_009617.1 4236649 4237323 R KEGG: cac:CAC0029 distantly related to cell wall-associated hydrolase, similar to YycO Bacillus subtilis; cell wall-associated hydrolase-like protein complement(4236649..4237323) Clostridium beijerinckii NCIMB 8052 5294847 YP_001310758.1 CDS Cbei_3684 NC_009617.1 4237692 4238360 R SMART: ATPase AAA; KEGG: btl:BALH_2727 ABC transporter ATP-binding protein; ATPase AAA complement(4237692..4238360) Clostridium beijerinckii NCIMB 8052 5294848 YP_001310759.1 CDS Cbei_3685 NC_009617.1 4238363 4239595 R KEGG: cpr:CPR_1980 permease, domain protein; hypothetical protein complement(4238363..4239595) Clostridium beijerinckii NCIMB 8052 5294849 YP_001310760.1 CDS Cbei_3686 NC_009617.1 4239610 4240713 R KEGG: cac:CAC3614 uncharacterized conserved membrane protein, possible permease; hypothetical protein complement(4239610..4240713) Clostridium beijerinckii NCIMB 8052 5294850 YP_001310761.1 CDS Cbei_3687 NC_009617.1 4240939 4241322 R hypothetical protein complement(4240939..4241322) Clostridium beijerinckii NCIMB 8052 5294851 YP_001310762.1 CDS Cbei_3688 NC_009617.1 4241411 4241992 R hypothetical protein complement(4241411..4241992) Clostridium beijerinckii NCIMB 8052 5294852 YP_001310763.1 CDS Cbei_3690 NC_009617.1 4244005 4244685 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cth:Cthe_0384 ABC transporter protein; ABC transporter complement(4244005..4244685) Clostridium beijerinckii NCIMB 8052 5296426 YP_001310764.1 CDS Cbei_3691 NC_009617.1 4244682 4245905 R PFAM: protein of unknown function DUF214; KEGG: btl:BALH_2728 ABC transporter permease; hypothetical protein complement(4244682..4245905) Clostridium beijerinckii NCIMB 8052 5294854 YP_001310765.1 CDS Cbei_3692 NC_009617.1 4245911 4247011 R PFAM: protein of unknown function DUF214; KEGG: cpr:CPR_1981 permease, domain protein; hypothetical protein complement(4245911..4247011) Clostridium beijerinckii NCIMB 8052 5294855 YP_001310766.1 CDS Cbei_3693 NC_009617.1 4247703 4248431 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC0773 ABC-type cobalt transport protein ATPase component; cobalt ABC transporter ATPase complement(4247703..4248431) Clostridium beijerinckii NCIMB 8052 5294856 YP_001310767.1 CDS Cbei_3694 NC_009617.1 4248436 4249230 R PFAM: cobalt transport protein; KEGG: cac:CAC0772 cobalt permease; cobalt ABC transporter permease complement(4248436..4249230) Clostridium beijerinckii NCIMB 8052 5294857 YP_001310768.1 CDS Cbei_3695 NC_009617.1 4249398 4250387 R catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM complement(4249398..4250387) Clostridium beijerinckii NCIMB 8052 5294858 YP_001310769.1 CDS Cbei_3696 NC_009617.1 4250712 4251371 R TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; KEGG: sat:SYN_00599 Ni2+ insertion GTPase; hydrogenase nickel incorporation protein HypB complement(4250712..4251371) Clostridium beijerinckii NCIMB 8052 5294859 YP_001310770.1 CDS Cbei_3697 NC_009617.1 4251715 4252137 D KEGG: cth:Cthe_1015 hypothetical protein; hypothetical protein 4251715..4252137 Clostridium beijerinckii NCIMB 8052 5294860 YP_001310771.1 CDS Cbei_3698 NC_009617.1 4252609 4253157 D PFAM: regulatory protein, MarR; KEGG: cac:CAC3406 transcriptional regulator, MarR/EmrR family; MarR family transcriptional regulator 4252609..4253157 Clostridium beijerinckii NCIMB 8052 5294861 YP_001310772.1 CDS Cbei_3699 NC_009617.1 4253184 4254629 D PFAM: beta-lactamase; KEGG: bld:BLi00328 hypothetical protein; beta-lactamase 4253184..4254629 Clostridium beijerinckii NCIMB 8052 5294862 YP_001310773.1 CDS Cbei_3700 NC_009617.1 4254824 4256128 R PFAM: protein of unknown function DUF445; KEGG: btl:BALH_1569 hypothetical protein; hypothetical protein complement(4254824..4256128) Clostridium beijerinckii NCIMB 8052 5294863 YP_001310774.1 CDS Cbei_3701 NC_009617.1 4256139 4257185 R PFAM: ApbE family lipoprotein; KEGG: tte:TTE2482 Membrane-associated lipoprotein involved in thiamine biosynthesis; ApbE family lipoprotein complement(4256139..4257185) Clostridium beijerinckii NCIMB 8052 5294864 YP_001310775.1 CDS Cbei_3702 NC_009617.1 4258477 4259391 D PFAM: periplasmic binding protein; KEGG: cpr:CPR_1115 iron compound ABC transporter iron-binding protein; periplasmic binding protein 4258477..4259391 Clostridium beijerinckii NCIMB 8052 5294865 YP_001310776.1 CDS Cbei_3703 NC_009617.1 4259384 4260406 D PFAM: transport system permease; KEGG: cpr:CPR_1116 ABC transporter permease, FecCD family; transport system permease 4259384..4260406 Clostridium beijerinckii NCIMB 8052 5294866 YP_001310777.1 CDS Cbei_3704 NC_009617.1 4260429 4261184 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpe:CPE1043 probable iron(III) dicitrate transport system; ABC transporter 4260429..4261184 Clostridium beijerinckii NCIMB 8052 5294867 YP_001310778.1 CDS Cbei_3705 NC_009617.1 4261502 4261972 R KEGG: fnu:FN2046 acetyltransferase; hypothetical protein complement(4261502..4261972) Clostridium beijerinckii NCIMB 8052 5294868 YP_001310779.1 CDS Cbei_3706 NC_009617.1 4262393 4263361 R KEGG: sth:STH2320 LuxR family transcriptional regulator; LuxR family transcriptional regulator complement(4262393..4263361) Clostridium beijerinckii NCIMB 8052 5294869 YP_001310780.1 CDS Cbei_3707 NC_009617.1 4263722 4264819 R TIGRFAM: diguanylate cyclase; SMART: GGDEF domain containing protein; KEGG: cac:CAC3544 membrane associated GGDEF domain containing protein; diguanylate cyclase complement(4263722..4264819) Clostridium beijerinckii NCIMB 8052 5294870 YP_001310781.1 CDS Cbei_3708 NC_009617.1 4265302 4266417 R KEGG: btl:BALH_2820 possible transporter; transporter complement(4265302..4266417) Clostridium beijerinckii NCIMB 8052 5294871 YP_001310782.1 CDS Cbei_3709 NC_009617.1 4266909 4267226 R KEGG: cpr:CPR_0183 cobalt/cobalamin transport protein CbiN; cobalt/cobalamin transport protein CbiN complement(4266909..4267226) Clostridium beijerinckii NCIMB 8052 5294872 YP_001310783.1 CDS Cbei_3710 NC_009617.1 4267226 4267978 R TIGRFAM: cobalamin biosynthesis protein CbiM; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: dsy:DSY1479 cobalamin biosynthesis protein CbiM; cobalamin biosynthesis protein CbiM complement(4267226..4267978) Clostridium beijerinckii NCIMB 8052 5294873 YP_001310784.1 CDS Cbei_3711 NC_009617.1 4268190 4269017 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mac:MA3551 cobalt ABC transporter ATP-binding protein; ABC transporter complement(4268190..4269017) Clostridium beijerinckii NCIMB 8052 5294874 YP_001310785.1 CDS Cbei_3712 NC_009617.1 4269390 4270220 R TIGRFAM: cobalt ABC transporter inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: cpr:CPR_0184 cobalt ABC transporter permease CbiQ; cobalt ABC transporter inner membrane subunit CbiQ complement(4269390..4270220) Clostridium beijerinckii NCIMB 8052 5294875 YP_001310786.1 CDS Cbei_3713 NC_009617.1 4271426 4271584 D PFAM: protein of unknown function DUF1540; KEGG: cpf:CPF_0355 hypothetical protein; hypothetical protein 4271426..4271584 Clostridium beijerinckii NCIMB 8052 5294876 YP_001310787.1 CDS Cbei_3714 NC_009617.1 4271761 4271910 R hypothetical protein complement(4271761..4271910) Clostridium beijerinckii NCIMB 8052 5294877 YP_001310788.1 CDS Cbei_3715 NC_009617.1 4272816 4273142 R KEGG: pfl:PFL_2781 hypothetical protein; hypothetical protein complement(4272816..4273142) Clostridium beijerinckii NCIMB 8052 5294878 YP_001310789.1 CDS Cbei_3716 NC_009617.1 4273366 4274391 R PFAM: Domain of unknown function DUF1835; KEGG: cno:NT01CX_2353 hypothetical protein; hypothetical protein complement(4273366..4274391) Clostridium beijerinckii NCIMB 8052 5294879 YP_001310790.1 CDS Cbei_3717 NC_009617.1 4275095 4275892 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pau:PA14_63410 hypothetical protein; type 11 methyltransferase 4275095..4275892 Clostridium beijerinckii NCIMB 8052 5294880 YP_001310791.1 CDS Cbei_3718 NC_009617.1 4276283 4276696 R KEGG: cpf:CPF_0742 hypothetical protein; hypothetical protein complement(4276283..4276696) Clostridium beijerinckii NCIMB 8052 5294881 YP_001310792.1 CDS Cbei_3719 NC_009617.1 4277682 4278272 R PFAM: transferase hexapeptide repeat containing protein; KEGG: lwe:lwe2312 maltose transacetylase; maltose O-acetyltransferase complement(4277682..4278272) Clostridium beijerinckii NCIMB 8052 5294882 YP_001310793.1 CDS Cbei_3720 NC_009617.1 4278312 4279040 R KEGG: cpe:CPE0580 probable iron-sulfur binding reductase; hypothetical protein complement(4278312..4279040) Clostridium beijerinckii NCIMB 8052 5294883 YP_001310794.1 CDS Cbei_3721 NC_009617.1 4279406 4279843 D PFAM: LytTr DNA-binding region; KEGG: lmf:LMOf2365_1005 hypothetical protein; response regulator receiver protein 4279406..4279843 Clostridium beijerinckii NCIMB 8052 5294884 YP_001310795.1 CDS Cbei_3722 NC_009617.1 4279860 4280294 D hypothetical protein 4279860..4280294 Clostridium beijerinckii NCIMB 8052 5294885 YP_001310796.1 CDS Cbei_3723 NC_009617.1 4280466 4280753 R hypothetical protein complement(4280466..4280753) Clostridium beijerinckii NCIMB 8052 5294886 YP_001310797.1 CDS Cbei_3724 NC_009617.1 4281183 4282025 R PFAM: aldo/keto reductase; KEGG: zmo:ZMO1344 2,5-diketo-D-gluconate reductase; 2,5-didehydrogluconate reductase complement(4281183..4282025) Clostridium beijerinckii NCIMB 8052 5294887 YP_001310798.1 CDS Cbei_3725 NC_009617.1 4282325 4284469 D PFAM: Peptidoglycan-binding domain 1 protein; Domain of unknown function DUF1906; KEGG: bsu:BG12736 hypothetical protein; hypothetical protein 4282325..4284469 Clostridium beijerinckii NCIMB 8052 5294888 YP_001310799.1 CDS Cbei_3726 NC_009617.1 4284531 4285064 R hypothetical protein complement(4284531..4285064) Clostridium beijerinckii NCIMB 8052 5294889 YP_001310800.1 CDS Cbei_3727 NC_009617.1 4285116 4285589 R hypothetical protein complement(4285116..4285589) Clostridium beijerinckii NCIMB 8052 5294890 YP_001310801.1 CDS Cbei_3728 NC_009617.1 4285949 4286743 R PFAM: glycoside hydrolase, family 25; KEGG: cpf:CPF_0973 glycosyl hydrolase, family 25; glycoside hydrolase complement(4285949..4286743) Clostridium beijerinckii NCIMB 8052 5294891 YP_001310802.1 CDS Cbei_3729 NC_009617.1 4287258 4288193 D hypothetical protein 4287258..4288193 Clostridium beijerinckii NCIMB 8052 5294892 YP_001310803.1 CDS Cbei_3730 NC_009617.1 4288413 4288826 R KEGG: ctc:CTC01083 hypothetical protein; hypothetical protein complement(4288413..4288826) Clostridium beijerinckii NCIMB 8052 5294893 YP_001310804.1 CDS Cbei_3731 NC_009617.1 4289789 4290445 R KEGG: cpr:CPR_C0032 hypothetical protein; hypothetical protein complement(4289789..4290445) Clostridium beijerinckii NCIMB 8052 5294894 YP_001310805.1 CDS Cbei_3732 NC_009617.1 4290450 4290935 R SMART: ATPase AAA; KEGG: bha:BH3541 hypothetical protein; ATPase AAA complement(4290450..4290935) Clostridium beijerinckii NCIMB 8052 5294895 YP_001310806.1 CDS Cbei_3733 NC_009617.1 4291123 4291911 R KEGG: lin:lin0086 hypothetical protein; hypothetical protein complement(4291123..4291911) Clostridium beijerinckii NCIMB 8052 5294896 YP_001310807.1 CDS Cbei_3734 NC_009617.1 4291958 4292146 R hypothetical protein complement(4291958..4292146) Clostridium beijerinckii NCIMB 8052 5294897 YP_001310808.1 CDS Cbei_3735 NC_009617.1 4292241 4292447 R PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator complement(4292241..4292447) Clostridium beijerinckii NCIMB 8052 5294898 YP_001310809.1 CDS Cbei_3736 NC_009617.1 4293237 4294472 R PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC0762 permease, probably tetracycline resistance protein; major facilitator superfamily transporter complement(4293237..4294472) Clostridium beijerinckii NCIMB 8052 5294899 YP_001310810.1 CDS Cbei_3737 NC_009617.1 4294662 4295303 R PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: mac:MA0445 iron-sulfur flavoprotein; NADPH-dependent FMN reductase complement(4294662..4295303) Clostridium beijerinckii NCIMB 8052 5294900 YP_001310811.1 CDS Cbei_3738 NC_009617.1 4295744 4296964 R PFAM: YibE/F family protein; KEGG: cac:CAC0206 hypothetical protein; hypothetical protein complement(4295744..4296964) Clostridium beijerinckii NCIMB 8052 5294901 YP_001310812.1 CDS Cbei_3739 NC_009617.1 4297076 4298734 R PFAM: metallophosphoesterase; KEGG: cac:CAC0205 predicted phosphohydrolase, Icc family; metallophosphoesterase complement(4297076..4298734) Clostridium beijerinckii NCIMB 8052 5294902 YP_001310813.1 CDS Cbei_3740 NC_009617.1 4299506 4299988 R PFAM: regulatory protein, MarR; KEGG: cac:CAC0763 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(4299506..4299988) Clostridium beijerinckii NCIMB 8052 5294903 YP_001310814.1 CDS Cbei_3741 NC_009617.1 4300116 4300778 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bfs:BF0801 phosphoglycolate phosphatase; HAD family hydrolase complement(4300116..4300778) Clostridium beijerinckii NCIMB 8052 5294904 YP_001310815.1 CDS Cbei_3742 NC_009617.1 4300949 4301659 R KEGG: cac:CAC0207 hypothetical protein, CF-6 family; hypothetical protein complement(4300949..4301659) Clostridium beijerinckii NCIMB 8052 5294905 YP_001310816.1 CDS Cbei_3743 NC_009617.1 4302172 4302705 D PFAM: sigma-70 region 4 domain protein; KEGG: ctc:pE88_61 transcriptional activator TetR; ECF subfamily RNA polymerase sigma-24 factor 4302172..4302705 Clostridium beijerinckii NCIMB 8052 5294906 YP_001310817.1 CDS Cbei_3744 NC_009617.1 4302710 4302931 D KEGG: ctc:pE88_04 UviB homologous protein; UviB-like protein 4302710..4302931 Clostridium beijerinckii NCIMB 8052 5294907 YP_001310818.1 CDS Cbei_3745 NC_009617.1 4303144 4303677 D hypothetical protein 4303144..4303677 Clostridium beijerinckii NCIMB 8052 5294908 YP_001310819.1 CDS Cbei_3746 NC_009617.1 4304079 4304399 D hypothetical protein 4304079..4304399 Clostridium beijerinckii NCIMB 8052 5294909 YP_001310820.1 CDS Cbei_3747 NC_009617.1 4304461 4304763 R KEGG: bld:BLi03761 YwkF; hypothetical protein complement(4304461..4304763) Clostridium beijerinckii NCIMB 8052 5294910 YP_001310821.1 CDS Cbei_3748 NC_009617.1 4304861 4305181 R hypothetical protein complement(4304861..4305181) Clostridium beijerinckii NCIMB 8052 5294911 YP_001310822.1 CDS Cbei_3749 NC_009617.1 4305333 4306412 R PFAM: helix-turn-helix domain protein; KEGG: dsy:DSY1013 hypothetical protein; XRE family transcriptional regulator complement(4305333..4306412) Clostridium beijerinckii NCIMB 8052 5294912 YP_001310823.1 CDS Cbei_3750 NC_009617.1 4306613 4307134 R PFAM: protein of unknown function DUF1706; KEGG: cno:NT01CX_2000 hypothetical protein; hypothetical protein complement(4306613..4307134) Clostridium beijerinckii NCIMB 8052 5294913 YP_001310824.1 CDS Cbei_3751 NC_009617.1 4307295 4307762 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mla:Mlab_1725 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(4307295..4307762) Clostridium beijerinckii NCIMB 8052 5294914 YP_001310825.1 CDS Cbei_3752 NC_009617.1 4307764 4308150 R PFAM: Carboxymuconolactone decarboxylase; KEGG: bxe:Bxe_C0569 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase complement(4307764..4308150) Clostridium beijerinckii NCIMB 8052 5294915 YP_001310826.1 CDS Cbei_3753 NC_009617.1 4308216 4308593 R KEGG: cac:CAC2531 S-adenosylmethionine-dependent methyltransferase; S-adenosylmethionine-dependent methyltransferase complement(4308216..4308593) Clostridium beijerinckii NCIMB 8052 5294916 YP_001310827.1 CDS Cbei_3754 NC_009617.1 4308611 4308826 R KEGG: cac:CAC2531 S-adenosylmethionine-dependent methyltransferase; S-adenosylmethionine-dependent methyltransferase complement(4308611..4308826) Clostridium beijerinckii NCIMB 8052 5294917 YP_001310828.1 CDS Cbei_3755 NC_009617.1 4309315 4309731 D hypothetical protein 4309315..4309731 Clostridium beijerinckii NCIMB 8052 5294918 YP_001310829.1 CDS Cbei_3756 NC_009617.1 4310230 4310565 R PFAM: Cupin 2, conserved barrel domain protein; KEGG: dsy:DSY2733 hypothetical protein; cupin complement(4310230..4310565) Clostridium beijerinckii NCIMB 8052 5294919 YP_001310830.1 CDS Cbei_3757 NC_009617.1 4310570 4310908 R PFAM: Cupin 2, conserved barrel domain protein; KEGG: ctc:CTC00439 hypothetical protein; cupin complement(4310570..4310908) Clostridium beijerinckii NCIMB 8052 5294920 YP_001310831.1 CDS Cbei_3758 NC_009617.1 4311211 4315128 R TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: mhu:Mhun_1325 CoA enzyme activase; CoA-substrate-specific enzyme activase complement(4311211..4315128) Clostridium beijerinckii NCIMB 8052 5294921 YP_001310832.1 CDS Cbei_3759 NC_009617.1 4315560 4316930 R PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: bsu:BG12424 spore coat protein, similar to reticuline oxidase; FAD linked oxidase domain-containing protein complement(4315560..4316930) Clostridium beijerinckii NCIMB 8052 5294922 YP_001310833.1 CDS Cbei_3760 NC_009617.1 4317406 4318209 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY1005 hypothetical protein; ABC transporter complement(4317406..4318209) Clostridium beijerinckii NCIMB 8052 5294923 YP_001310834.1 CDS Cbei_3761 NC_009617.1 4318209 4319240 R PFAM: transport system permease; KEGG: dsy:DSY1004 hypothetical protein; transport system permease complement(4318209..4319240) Clostridium beijerinckii NCIMB 8052 5294924 YP_001310835.1 CDS Cbei_3762 NC_009617.1 4319237 4320235 R PFAM: transport system permease; KEGG: dsy:DSY1003 hypothetical protein; transport system permease complement(4319237..4320235) Clostridium beijerinckii NCIMB 8052 5294925 YP_001310836.1 CDS Cbei_3763 NC_009617.1 4320235 4321260 R PFAM: periplasmic binding protein; KEGG: dsy:DSY1002 hypothetical protein; periplasmic binding protein complement(4320235..4321260) Clostridium beijerinckii NCIMB 8052 5294926 YP_001310837.1 CDS Cbei_3764 NC_009617.1 4321918 4323291 R TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: dsy:DSY1272 hypothetical protein; sugar (glycoside-Pentoside-hexuronide) transporter complement(4321918..4323291) Clostridium beijerinckii NCIMB 8052 5294927 YP_001310838.1 CDS Cbei_3765 NC_009617.1 4323577 4325646 R PFAM: glycoside hydrolase, family 3 domain protein; KEGG: aor:AO090005000337 beta-glucosidase-related glycosidases Pfam: Glyco_hydro_3 Glyco_hydro_3_C; glycoside hydrolase family protein complement(4323577..4325646) Clostridium beijerinckii NCIMB 8052 5294928 YP_001310839.1 CDS Cbei_3766 NC_009617.1 4325649 4326581 R PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: cpr:CPR_1432 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(4325649..4326581) Clostridium beijerinckii NCIMB 8052 5294929 YP_001310840.1 CDS Cbei_3767 NC_009617.1 4326996 4327400 D PFAM: FMN-binding domain protein; KEGG: cac:CAC2767 hypothetical protein; FMN-binding domain-containing protein 4326996..4327400 Clostridium beijerinckii NCIMB 8052 5294930 YP_001310841.1 CDS Cbei_3768 NC_009617.1 4327553 4328026 R TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease, EIIA 1 domain; KEGG: tte:TTE0469 Phosphotransferase system IIA components; PTS system glucose subfamily transporter subunit IIA complement(4327553..4328026) Clostridium beijerinckii NCIMB 8052 5294931 YP_001310842.1 CDS Cbei_3769 NC_009617.1 4328136 4328993 R TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: cpr:CPR_1309 HAD hydrolase, IIB family; cof family hydrolase complement(4328136..4328993) Clostridium beijerinckii NCIMB 8052 5294932 YP_001310843.1 CDS Cbei_3770 NC_009617.1 4328983 4330461 R PFAM: PRD domain protein; Helix-turn-helix, type 11 domain protein; KEGG: tte:TTE0340 transcriptional regulator; transcriptional antiterminator BglG complement(4328983..4330461) Clostridium beijerinckii NCIMB 8052 5294933 YP_001310844.1 CDS Cbei_3771 NC_009617.1 4330682 4332829 R PFAM: glycoside hydrolase, family 3 domain protein; KEGG: efa:EF1238 glycosyl hydrolase, family 3; glycoside hydrolase family protein complement(4330682..4332829) Clostridium beijerinckii NCIMB 8052 5294934 YP_001310845.1 CDS Cbei_3772 NC_009617.1 4332842 4334236 R TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: bcl:ABC1453 PTS system, sucrose-specific enzyme II, BC component; PTS system glucose-like transporter subunit IIB complement(4332842..4334236) Clostridium beijerinckii NCIMB 8052 5294935 YP_001310846.1 CDS Cbei_3773 NC_009617.1 4334229 4335602 R TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32, N terminal domain protein; Glycosyl hydrolase family 32, C-terminal domain protein; SMART: glycoside hydrolase, family 32; KEGG: bld:BLi04016 sucrase-6-phosphate hydrolase; RBL02848; sucrose-6-phosphate hydrolase complement(4334229..4335602) Clostridium beijerinckii NCIMB 8052 5294936 YP_001310847.1 CDS Cbei_3774 NC_009617.1 4335981 4337354 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cac:CAC0565 histidine kinase (HAMP, HisKA and HATPase domains); integral membrane sensor signal transduction histidine kinase complement(4335981..4337354) Clostridium beijerinckii NCIMB 8052 5294937 YP_001310848.1 CDS Cbei_3775 NC_009617.1 4337367 4338065 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ctc:CTC00805 two-component response regulator; two component transcriptional regulator complement(4337367..4338065) Clostridium beijerinckii NCIMB 8052 5294938 YP_001310849.1 CDS Cbei_3776 NC_009617.1 4338067 4339332 R PFAM: glycosyl transferase, family 39; KEGG: cpr:CPR_0954 dolichyl-phosphate-mannose-protein mannosyltransferase family protein; glycosyl transferase family protein complement(4338067..4339332) Clostridium beijerinckii NCIMB 8052 5294939 YP_001310850.1 CDS Cbei_3777 NC_009617.1 4339344 4339688 R KEGG: mta:Moth_2226 small multidrug resistance transmembrane protein; small multidrug resistance transmembrane protein complement(4339344..4339688) Clostridium beijerinckii NCIMB 8052 5294940 YP_001310851.1 CDS Cbei_3778 NC_009617.1 4339859 4340554 R PFAM: glycosyl transferase, family 2; KEGG: cth:Cthe_3099 glycosyl transferase, family 2; glycosyl transferase family protein complement(4339859..4340554) Clostridium beijerinckii NCIMB 8052 5294941 YP_001310852.1 CDS Cbei_3779 NC_009617.1 4340910 4342367 R PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eca:ECA0910 flavoprotein subunit of a reductase; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein complement(4340910..4342367) Clostridium beijerinckii NCIMB 8052 5294942 YP_001310853.1 CDS Cbei_3780 NC_009617.1 4342428 4343672 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: gme:Gmet_2080 respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; 4Fe-4S ferredoxin complement(4342428..4343672) Clostridium beijerinckii NCIMB 8052 5294943 YP_001310854.1 CDS Cbei_3781 NC_009617.1 4343686 4345794 R PFAM: ferredoxin; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: eba:ebA5294 subunit of oxidoreductase of unknown function, conserved in Azoarcus-type benzoate degradation gene clusters; ferredoxin complement(4343686..4345794) Clostridium beijerinckii NCIMB 8052 5294944 YP_001310855.1 CDS Cbei_3782 NC_009617.1 4345894 4346712 D PFAM: regulatory protein, MerR; KEGG: bha:BH3496 transcriptional regulator of multidrug-efflux transporter genes; MerR family transcriptional regulator 4345894..4346712 Clostridium beijerinckii NCIMB 8052 5294945 YP_001310856.1 CDS Cbei_3783 NC_009617.1 4346992 4347813 D PFAM: chemotaxis sensory transducer; KEGG: cac:CAC0741 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4346992..4347813 Clostridium beijerinckii NCIMB 8052 5294946 YP_001310857.1 CDS Cbei_3784 NC_009617.1 4348378 4349145 R KEGG: det:DET0571 hypothetical protein; hypothetical protein complement(4348378..4349145) Clostridium beijerinckii NCIMB 8052 5294947 YP_001310858.1 CDS Cbei_3785 NC_009617.1 4349253 4349915 R PFAM: LuxR family transcriptional regulator; response regulator receiver; KEGG: cac:CAC2939 response regulator (CheY-like receiver domain and HTH-type DNA-binding domain); two component LuxR family transcriptional regulator complement(4349253..4349915) Clostridium beijerinckii NCIMB 8052 5294948 YP_001310859.1 CDS Cbei_3786 NC_009617.1 4349908 4351206 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: cac:CAC0239 histidine kinase-like ATPase; integral membrane sensor signal transduction histidine kinase complement(4349908..4351206) Clostridium beijerinckii NCIMB 8052 5294949 YP_001310860.1 CDS Cbei_3787 NC_009617.1 4351520 4352485 D KEGG: pfa:PF11_0218 hypothetical protein; hypothetical protein 4351520..4352485 Clostridium beijerinckii NCIMB 8052 5294950 YP_001310861.1 CDS Cbei_3788 NC_009617.1 4352490 4353026 D TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: bsu:BG11573 RNA polymerase ECF-type sigma factor; ECF subfamily RNA polymerase sigma-24 factor 4352490..4353026 Clostridium beijerinckii NCIMB 8052 5294951 YP_001310862.1 CDS Cbei_3789 NC_009617.1 4353317 4353820 D KEGG: cac:CAC0563 predicted membrane protein; membrane protein 4353317..4353820 Clostridium beijerinckii NCIMB 8052 5294952 YP_001310863.1 CDS Cbei_3790 NC_009617.1 4354071 4355786 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01211 methyl-accepting chemotaxis protein TlpA; methyl-accepting chemotaxis sensory transducer complement(4354071..4355786) Clostridium beijerinckii NCIMB 8052 5294953 YP_001310864.1 CDS Cbei_3791 NC_009617.1 4356132 4356563 R PFAM: MOSC domain containing protein; KEGG: gme:Gmet_0302 MOSC; MOSC domain-containing protein complement(4356132..4356563) Clostridium beijerinckii NCIMB 8052 5294954 YP_001310865.1 CDS Cbei_3792 NC_009617.1 4356572 4357042 R TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: cac:CAC1992 molybdenum cofactor biosynthesis enzyme, MoaC; molybdenum cofactor biosynthesis protein C complement(4356572..4357042) Clostridium beijerinckii NCIMB 8052 5294955 YP_001310866.1 CDS Cbei_3793 NC_009617.1 4357047 4358003 R TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dsy:DSY3488 hypothetical protein; molybdenum cofactor biosynthesis protein A complement(4357047..4358003) Clostridium beijerinckii NCIMB 8052 5294956 YP_001310867.1 CDS Cbei_3794 NC_009617.1 4357996 4358622 R KEGG: pca:Pcar_1839 formate dehydrogenase accessory protein FdhD; formate dehydrogenase accessory protein FdhD complement(4357996..4358622) Clostridium beijerinckii NCIMB 8052 5294957 YP_001310868.1 CDS Cbei_3795 NC_009617.1 4358627 4359196 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: sth:STH3292 electron transport protein; 4Fe-4S ferredoxin complement(4358627..4359196) Clostridium beijerinckii NCIMB 8052 5294958 YP_001310869.1 CDS Cbei_3796 NC_009617.1 4359197 4360582 R TIGRFAM: hydrogenase, Fe-only; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; iron hydrogenase, small subunit; hydrogenase large subunit domain protein; KEGG: sth:STH3293 iron hydrogenase; hydrogenase, Fe-only complement(4359197..4360582) Clostridium beijerinckii NCIMB 8052 5294959 YP_001310870.1 CDS Cbei_3797 NC_009617.1 4360601 4361155 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: sth:STH3294 electron transport protein; 4Fe-4S ferredoxin complement(4360601..4361155) Clostridium beijerinckii NCIMB 8052 5294960 YP_001310871.1 CDS Cbei_3798 NC_009617.1 4361577 4362368 R TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase, subunit FdhD; KEGG: chy:CHY_0800 formate dehydrogenase accessory protein; formate dehydrogenase family accessory protein FdhD complement(4361577..4362368) Clostridium beijerinckii NCIMB 8052 5294961 YP_001310872.1 CDS Cbei_3799 NC_009617.1 4362346 4362924 R TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: gsu:GSU3147 molybdopterin-guanine dinucleotide biosynthesis protein MobB; molybdopterin-guanine dinucleotide biosynthesis protein MobB complement(4362346..4362924) Clostridium beijerinckii NCIMB 8052 5294962 YP_001310873.1 CDS Cbei_3800 NC_009617.1 4362902 4364113 R TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: sat:SYN_00272 molybdopterin biosynthesis MoeA protein; molybdenum cofactor synthesis domain-containing protein complement(4362902..4364113) Clostridium beijerinckii NCIMB 8052 5294963 YP_001310874.1 CDS Cbei_3801 NC_009617.1 4364248 4366389 R TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rru:Rru_A0324 formate dehydrogenase, alpha subunit; formate dehydrogenase subunit alpha complement(4364248..4366389) Clostridium beijerinckii NCIMB 8052 5294964 YP_001310875.1 CDS Cbei_3802 NC_009617.1 4366608 4366958 R hypothetical protein complement(4366608..4366958) Clostridium beijerinckii NCIMB 8052 5294965 YP_001310876.1 CDS Cbei_3803 NC_009617.1 4367236 4367724 D TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; KEGG: cac:CAC2022 molybdopterin biosynthesis enzyme, MoaB; molybdenum cofactor synthesis domain-containing protein 4367236..4367724 Clostridium beijerinckii NCIMB 8052 5294966 YP_001310877.1 CDS Cbei_3804 NC_009617.1 4367902 4369593 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01881 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(4367902..4369593) Clostridium beijerinckii NCIMB 8052 5294967 YP_001310878.1 CDS Cbei_3805 NC_009617.1 4370101 4370835 R KEGG: mst:Msp_1287 hypothetical multicopy protein B 1; hypothetical protein complement(4370101..4370835) Clostridium beijerinckii NCIMB 8052 5294968 YP_001310879.1 CDS Cbei_3806 NC_009617.1 4370869 4372581 R PFAM: ATPase AAA, central domain protein; SMART: ATPase AAA; KEGG: bld:BLi04176 hypothetical protein; ATPase central domain-containing protein complement(4370869..4372581) Clostridium beijerinckii NCIMB 8052 5294969 YP_001310880.1 CDS Cbei_3807 NC_009617.1 4372565 4373188 R TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; KEGG: bld:BLi04172 anaerobic ribonucleoside-triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein complement(4372565..4373188) Clostridium beijerinckii NCIMB 8052 5294970 YP_001310881.1 CDS Cbei_3808 NC_009617.1 4373188 4374093 R KEGG: pfa:PFL1930w hypothetical protein; hypothetical protein complement(4373188..4374093) Clostridium beijerinckii NCIMB 8052 5294971 YP_001310882.1 CDS Cbei_3809 NC_009617.1 4374095 4374310 R KEGG: mst:Msp_1552 hypothetical protein; hypothetical protein complement(4374095..4374310) Clostridium beijerinckii NCIMB 8052 5294972 YP_001310883.1 CDS Cbei_3810 NC_009617.1 4375124 4376017 R PFAM: ROK family protein; KEGG: bha:BH0797 glucose kinase; ROK family protein complement(4375124..4376017) Clostridium beijerinckii NCIMB 8052 5294973 YP_001310884.1 CDS Cbei_3811 NC_009617.1 4376176 4376499 R PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: cpr:CPR_2600 phosphotransferase system enzyme II, PtcA; PTS system lactose/cellobiose-specific transporter subunit IIA complement(4376176..4376499) Clostridium beijerinckii NCIMB 8052 5294974 YP_001310885.1 CDS Cbei_3812 NC_009617.1 4376511 4376813 R PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: lwe:lwe2728 PTS system, beta-glucoside-specific, IIB component; phosphotransferase system, lactose/cellobiose-specific IIB subunit complement(4376511..4376813) Clostridium beijerinckii NCIMB 8052 5294975 YP_001310886.1 CDS Cbei_3813 NC_009617.1 4376852 4378153 R TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system, EIIC; KEGG: lmf:LMOf2365_2774 PTS system, beta-glucoside-specific, IIC component; PTS system lactose/cellobiose family transporter subunit IIC complement(4376852..4378153) Clostridium beijerinckii NCIMB 8052 5294976 YP_001310887.1 CDS Cbei_3814 NC_009617.1 4378170 4379558 R PFAM: glycoside hydrolase, family 1; KEGG: lin:lin0391 beta-glucosidase; beta-glucosidase complement(4378170..4379558) Clostridium beijerinckii NCIMB 8052 5294977 YP_001310888.1 CDS Cbei_3815 NC_009617.1 4379769 4380479 D PFAM: GntR family transcriptional regulator; UbiC transcription regulator-associated domain protein; KEGG: lin:lin0390 hypothetical protein; GntR family transcriptional regulator 4379769..4380479 Clostridium beijerinckii NCIMB 8052 5294978 YP_001310889.1 CDS Cbei_3816 NC_009617.1 4380702 4382120 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; KEGG: ecj:JW2214 fused response regulator of ato opeon, in two-component system with AtoS; two component, sigma54 specific, Fis family transcriptional regulator complement(4380702..4382120) Clostridium beijerinckii NCIMB 8052 5294979 YP_001310890.1 CDS Cbei_3818 NC_009617.1 4382855 4384678 R with AtoC is a member of a two-component regulatory system involved in the transcriptional regulation of the ato genes for acetoacetate metabolism; sensory histidine kinase AtoS complement(4382855..4384678) Clostridium beijerinckii NCIMB 8052 5296427 YP_001310891.1 CDS Cbei_3819 NC_009617.1 4384889 4386415 R PFAM: coenzyme A transferase; KEGG: ctc:CTC00708 acetyl-coA:acetoacetyl-coA transferase alpha subunit; coenzyme A transferase complement(4384889..4386415) Clostridium beijerinckii NCIMB 8052 5294981 YP_001310892.1 CDS Cbei_3820 NC_009617.1 4386474 4387421 R PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: blo:BL0058 possible butyryl-CoA dehydrogenase; NAD-binding 3-hydroxyacyl-CoA dehydrogenase complement(4386474..4387421) Clostridium beijerinckii NCIMB 8052 5294982 YP_001310893.1 CDS Cbei_3821 NC_009617.1 4387600 4388925 R PFAM: short chain fatty acid transporter; KEGG: bur:Bcep18194_B1677 hypothetical protein; short chain fatty acid transporter complement(4387600..4388925) Clostridium beijerinckii NCIMB 8052 5294983 YP_001310894.1 CDS Cbei_3822 NC_009617.1 4389298 4389660 R hypothetical protein complement(4389298..4389660) Clostridium beijerinckii NCIMB 8052 5294984 YP_001310895.1 CDS Cbei_3823 NC_009617.1 4390074 4390919 R PFAM: chemotaxis sensory transducer; KEGG: cac:CAC1524 methyl-accepting chemotaxis-like domain (chemotaxis sensory transducer); methyl-accepting chemotaxis sensory transducer complement(4390074..4390919) Clostridium beijerinckii NCIMB 8052 5294985 YP_001310896.1 CDS Cbei_3824 NC_009617.1 4391332 4391880 R PFAM: GCN5-related N-acetyltransferase; KEGG: cpf:CPF_1059 acetyltransferase, GNAT family; N-acetyltransferase GCN5 complement(4391332..4391880) Clostridium beijerinckii NCIMB 8052 5294986 YP_001310897.1 CDS Cbei_3825 NC_009617.1 4392211 4393005 R KEGG: sth:STH1742 ABC transporter permease; ABC transporter permease complement(4392211..4393005) Clostridium beijerinckii NCIMB 8052 5294987 YP_001310898.1 CDS Cbei_3826 NC_009617.1 4393024 4393950 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mbu:Mbur_1837 ABC transporter ATPase subunit; ABC transporter complement(4393024..4393950) Clostridium beijerinckii NCIMB 8052 5294988 YP_001310899.1 CDS Cbei_3827 NC_009617.1 4393943 4395058 R PFAM: helix-turn-helix domain protein; KEGG: bcz:BCZK3019 DNA-binding protein; possible transcriptional regulator; XRE family transcriptional regulator complement(4393943..4395058) Clostridium beijerinckii NCIMB 8052 5294989 YP_001310900.1 CDS Cbei_3829 NC_009617.1 4396092 4396670 R PFAM: ThiJ/PfpI domain protein; KEGG: bcz:BCZK3357 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; ThiJ/PfpI domain-containing protein complement(4396092..4396670) Clostridium beijerinckii NCIMB 8052 5296428 YP_001310901.1 CDS Cbei_3830 NC_009617.1 4396921 4397313 R hypothetical protein complement(4396921..4397313) Clostridium beijerinckii NCIMB 8052 5294991 YP_001310902.1 CDS Cbei_3831 NC_009617.1 4397815 4398459 R PFAM: DTW domain containing protein; KEGG: ppr:PBPRA0133 hypothetical protein; DTW domain-containing protein complement(4397815..4398459) Clostridium beijerinckii NCIMB 8052 5294992 YP_001310903.1 CDS Cbei_3832 NC_009617.1 4399026 4400432 D PFAM: aldehyde dehydrogenase; KEGG: rru:Rru_A0914 aldehyde dehydrogenase; aldehyde dehydrogenase 4399026..4400432 Clostridium beijerinckii NCIMB 8052 5294993 YP_001310904.1 CDS Cbei_3833 NC_009617.1 4400524 4401177 D TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; KEGG: cac:CA_P0163 butyrate-acetoacetate CoA-transferase subunit A; 3-oxoacid CoA-transferase subunit A 4400524..4401177 Clostridium beijerinckii NCIMB 8052 5294994 YP_001310905.1 CDS Cbei_3834 NC_009617.1 4401178 4401843 D TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; KEGG: tte:TTE0721 Acyl-CoA:acetate CoA transferase beta subunit; 3-oxoacid CoA-transferase subunit B 4401178..4401843 Clostridium beijerinckii NCIMB 8052 5294995 YP_001310906.1 CDS Cbei_3835 NC_009617.1 4401916 4402656 D converts acetoacetate to acetone and carbon dioxide; acetoacetate decarboxylase 4401916..4402656 Clostridium beijerinckii NCIMB 8052 5294996 YP_001310907.1 CDS Cbei_3836 NC_009617.1 4403060 4403908 R PFAM: peptidase C1A, papain; KEGG: cac:CA_P0004 cysteine protease; peptidase C1A, papain complement(4403060..4403908) Clostridium beijerinckii NCIMB 8052 5294997 YP_001310908.1 CDS Cbei_3837 NC_009617.1 4404594 4405241 R PFAM: protein of unknown function DUF975; KEGG: bth:BT_3893 hypothetical protein; hypothetical protein complement(4404594..4405241) Clostridium beijerinckii NCIMB 8052 5294998 YP_001310909.1 CDS Cbei_3838 NC_009617.1 4405483 4405938 R PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC3374 predicted acetyltransferase; N-acetyltransferase GCN5 complement(4405483..4405938) Clostridium beijerinckii NCIMB 8052 5294999 YP_001310910.1 CDS Cbei_3839 NC_009617.1 4406057 4406650 R PFAM: protein of unknown function DUF205; KEGG: cac:CAC2500 hypothetical protein; membrane protein complement(4406057..4406650) Clostridium beijerinckii NCIMB 8052 5295000 YP_001310911.1 CDS Cbei_3840 NC_009617.1 4406708 4407019 R hypothetical protein complement(4406708..4407019) Clostridium beijerinckii NCIMB 8052 5295001 YP_001310912.1 CDS Cbei_3841 NC_009617.1 4407043 4407381 R hypothetical protein complement(4407043..4407381) Clostridium beijerinckii NCIMB 8052 5295002 YP_001310913.1 CDS Cbei_3842 NC_009617.1 4407539 4407826 R PFAM: YCII-related; KEGG: cac:CA_P0038 uncharacterized conserved protein, YCII family; hypothetical protein complement(4407539..4407826) Clostridium beijerinckii NCIMB 8052 5295003 YP_001310914.1 CDS Cbei_3843 NC_009617.1 4407978 4408577 R PFAM: transferase hexapeptide repeat containing protein; KEGG: vvy:VVA0614 acetyltransferase; hexapaptide repeat-containing transferase complement(4407978..4408577) Clostridium beijerinckii NCIMB 8052 5295004 YP_001310915.1 CDS Cbei_3844 NC_009617.1 4408747 4409217 R PFAM: GCN5-related N-acetyltransferase; KEGG: bca:BCE_1694 acetyltransferase, GNAT family; N-acetyltransferase GCN5 complement(4408747..4409217) Clostridium beijerinckii NCIMB 8052 5295005 YP_001310916.1 CDS Cbei_3845 NC_009617.1 4409315 4409983 R hypothetical protein complement(4409315..4409983) Clostridium beijerinckii NCIMB 8052 5295006 YP_001310917.1 CDS Cbei_3846 NC_009617.1 4410223 4410723 R hypothetical protein complement(4410223..4410723) Clostridium beijerinckii NCIMB 8052 5295007 YP_001310918.1 CDS Cbei_3847 NC_009617.1 4411343 4412200 R PFAM: helix-turn-helix- domain containing protein, AraC type; transcription activator, effector binding; KEGG: ctc:CTC00639 transcriptional regulatory protein; transcription activator, effector binding complement(4411343..4412200) Clostridium beijerinckii NCIMB 8052 5295008 YP_001310919.1 CDS Cbei_3848 NC_009617.1 4412307 4413326 R PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: cpe:CPE0841 two-component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase complement(4412307..4413326) Clostridium beijerinckii NCIMB 8052 5295009 YP_001310920.1 CDS Cbei_3849 NC_009617.1 4413323 4413994 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cpf:CPF_0836 DNA-binding response regulator; two component transcriptional regulator complement(4413323..4413994) Clostridium beijerinckii NCIMB 8052 5295010 YP_001310921.1 CDS Cbei_3850 NC_009617.1 4414121 4414834 R KEGG: mba:Mbar_A3209 hypothetical protein; hypothetical protein complement(4414121..4414834) Clostridium beijerinckii NCIMB 8052 5295011 YP_001310922.1 CDS Cbei_3851 NC_009617.1 4414824 4417022 R KEGG: mba:Mbar_A3210 hypothetical protein; hypothetical protein complement(4414824..4417022) Clostridium beijerinckii NCIMB 8052 5295012 YP_001310923.1 CDS Cbei_3852 NC_009617.1 4417025 4417888 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mba:Mbar_A3211 ABC transporter ATP-binding protein; ABC transporter complement(4417025..4417888) Clostridium beijerinckii NCIMB 8052 5295013 YP_001310924.1 CDS Cbei_3853 NC_009617.1 4417917 4419908 R PFAM: protein of unknown function DUF214; KEGG: cpe:CPE0851 probable ABC transporter; hypothetical protein complement(4417917..4419908) Clostridium beijerinckii NCIMB 8052 5295014 YP_001310925.1 CDS Cbei_3854 NC_009617.1 4420137 4422383 R KEGG: mba:Mbar_A3210 hypothetical protein; hypothetical protein complement(4420137..4422383) Clostridium beijerinckii NCIMB 8052 5295015 YP_001310926.1 CDS Cbei_3855 NC_009617.1 4422410 4424404 R PFAM: protein of unknown function DUF214; KEGG: cpe:CPE0851 probable ABC transporter; hypothetical protein complement(4422410..4424404) Clostridium beijerinckii NCIMB 8052 5295016 YP_001310927.1 CDS Cbei_3856 NC_009617.1 4424391 4425158 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_0841 ABC transporter ATP-binding protein; ABC transporter complement(4424391..4425158) Clostridium beijerinckii NCIMB 8052 5295017 YP_001310928.1 CDS Cbei_3857 NC_009617.1 4425591 4426568 R PFAM: alpha/beta hydrolase fold; KEGG: atc:AGR_C_3327A hypothetical protein; alpha/beta fold family hydrolase complement(4425591..4426568) Clostridium beijerinckii NCIMB 8052 5295018 YP_001310929.1 CDS Cbei_3858 NC_009617.1 4426976 4427572 D PFAM: regulatory protein, TetR; KEGG: bcl:ABC0634 transcriptional regulator, TetR family; TetR family transcriptional regulator 4426976..4427572 Clostridium beijerinckii NCIMB 8052 5295019 YP_001310930.1 CDS Cbei_3859 NC_009617.1 4428033 4430576 R PFAM: pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising protein, mobile region; KEGG: tde:TDE0349 phosphoenolpyruvate synthase; pyruvate phosphate dikinase complement(4428033..4430576) Clostridium beijerinckii NCIMB 8052 5295020 YP_001310931.1 CDS Cbei_3860 NC_009617.1 4430857 4431309 R PFAM: regulatory protein, MarR; KEGG: lmo:lmo0989 hypothetical protein; MarR family transcriptional regulator complement(4430857..4431309) Clostridium beijerinckii NCIMB 8052 5295021 YP_001310932.1 CDS Cbei_3861 NC_009617.1 4431780 4432403 D PFAM: regulatory protein, TetR; KEGG: dsy:DSY3670 hypothetical protein; TetR family transcriptional regulator 4431780..4432403 Clostridium beijerinckii NCIMB 8052 5295022 YP_001310933.1 CDS Cbei_3862 NC_009617.1 4432432 4434789 D PFAM: pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising protein, mobile region; KEGG: hch:HCH_06026 phosphoenolpyruvate synthase/pyruvate phosphate dikinase; pyruvate phosphate dikinase 4432432..4434789 Clostridium beijerinckii NCIMB 8052 5295023 YP_001310934.1 CDS Cbei_3863 NC_009617.1 4434976 4435437 D PFAM: regulatory protein, MerR; KEGG: bcl:ABC1108 hypothetical protein; MerR family transcriptional regulator 4434976..4435437 Clostridium beijerinckii NCIMB 8052 5295024 YP_001310935.1 CDS Cbei_3864 NC_009617.1 4435544 4436509 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gfo:orf2067 zinc-type alcohol dehydrogenase; alcohol dehydrogenase 4435544..4436509 Clostridium beijerinckii NCIMB 8052 5295025 YP_001310936.1 CDS Cbei_3865 NC_009617.1 4436837 4437712 R PFAM: LysR family transcriptional regulator; LysR, substrate-binding; KEGG: bsu:BG10570 similar to transcriptional regulator (LysR family); LysR family transcriptional regulator complement(4436837..4437712) Clostridium beijerinckii NCIMB 8052 5295026 YP_001310937.1 CDS Cbei_3866 NC_009617.1 4437983 4439137 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: cac:CAC2253 membrane-associated sensory histidine kinase-like ATPase; integral membrane sensor signal transduction histidine kinase 4437983..4439137 Clostridium beijerinckii NCIMB 8052 5295027 YP_001310938.1 CDS Cbei_3867 NC_009617.1 4439162 4439821 D PFAM: LuxR family transcriptional regulator; response regulator receiver; KEGG: cac:CAC0174 response regulator, CheY-like receiver domain and HTH DNA-binding domain; two component LuxR family transcriptional regulator 4439162..4439821 Clostridium beijerinckii NCIMB 8052 5295028 YP_001310939.1 CDS Cbei_3868 NC_009617.1 4440273 4444379 R PFAM: glycoside hydrolase, family 3 domain protein; cell wall binding repeat-containing protein; KEGG: tma:TM0025 beta-glucosidase; glycoside hydrolase family protein complement(4440273..4444379) Clostridium beijerinckii NCIMB 8052 5295029 YP_001310940.1 CDS Cbei_3870 NC_009617.1 4445651 4450141 R PFAM: cell wall binding repeat-containing protein; sugar-binding domain protein; Glycosyl hydrolase family 32, N terminal domain protein; Glycosyl hydrolase family 32, C-terminal domain protein; SMART: glycoside hydrolase, family 32; KEGG: ssa:SSA_2023 fructan beta-fructosidase precursor; glycosyl hydrolase family 32 protein complement(4445651..4450141) Clostridium beijerinckii NCIMB 8052 5296429 YP_001310941.1 CDS Cbei_3871 NC_009617.1 4450461 4451282 R TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: msu:MS2377 PTS system, mannose-specific IID component; PTS system mannose/fructose/sorbose family transporter subunit IID complement(4450461..4451282) Clostridium beijerinckii NCIMB 8052 5295031 YP_001310942.1 CDS Cbei_3872 NC_009617.1 4451304 4452095 R TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS, sorbose-specific IIC subunit; KEGG: msu:MS2378 PTS system, mannose-specific IIC component; PTS system mannose/fructose/sorbose family transporter subunit IIC complement(4451304..4452095) Clostridium beijerinckii NCIMB 8052 5295032 YP_001310943.1 CDS Cbei_3873 NC_009617.1 4452148 4452639 R TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; PFAM: PTS system sorbose subfamily IIB component; KEGG: yps:YPTB1634 PTS system, mannose-specific IIAB component; PTS system mannose/fructose/sorbose family transporter subunit IIB complement(4452148..4452639) Clostridium beijerinckii NCIMB 8052 5295033 YP_001310944.1 CDS Cbei_3874 NC_009617.1 4452809 4453231 R TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA subunit; PFAM: PTS system fructose subfamily IIA component; KEGG: lin:lin0777 similar to mannose-specific phosphotransferase system (PTS) component IIA; PTS system mannose/fructose/sorbose family transporter subunit IIA complement(4452809..4453231) Clostridium beijerinckii NCIMB 8052 5295034 YP_001310945.1 CDS Cbei_3875 NC_009617.1 4453694 4456489 R PFAM: sigma-54 factor, interaction domain-containing protein; PTS system fructose subfamily IIA component; PRD domain protein; SMART: ATPase AAA; KEGG: lwe:lwe0744 transcriptional regulator LevR family; sigma-54 factor interaction domain-containing protein complement(4453694..4456489) Clostridium beijerinckii NCIMB 8052 5295035 YP_001310946.1 CDS Cbei_3876 NC_009617.1 4456907 4457854 R PFAM: PfkB domain protein; KEGG: cpf:CPF_1782 fructokinase; ribokinase-like domain-containing protein complement(4456907..4457854) Clostridium beijerinckii NCIMB 8052 5295036 YP_001310947.1 CDS Cbei_3877 NC_009617.1 4458015 4459502 R KEGG: bld:BLi04178 hypothetical protein; TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32, N terminal domain protein; Glycosyl hydrolase family 32, C-terminal domain protein; SMART: glycoside hydrolase, family 32; sucrose-6-phosphate hydrolase complement(4458015..4459502) Clostridium beijerinckii NCIMB 8052 5295037 YP_001310948.1 CDS Cbei_3878 NC_009617.1 4459569 4461185 R PFAM: extracellular solute-binding protein, family 1; KEGG: spn:SP_1796 ABC transporter substrate-binding protein; extracellular solute-binding protein complement(4459569..4461185) Clostridium beijerinckii NCIMB 8052 5295038 YP_001310949.1 CDS Cbei_3879 NC_009617.1 4461220 4462122 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spn:SP_1797 ABC transporter permease; binding-protein-dependent transport system inner membrane protein complement(4461220..4462122) Clostridium beijerinckii NCIMB 8052 5295039 YP_001310950.1 CDS Cbei_3880 NC_009617.1 4462124 4463116 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spn:SP_1798 ABC transporter permease; binding-protein-dependent transport system inner membrane protein complement(4462124..4463116) Clostridium beijerinckii NCIMB 8052 5295040 YP_001310951.1 CDS Cbei_3881 NC_009617.1 4463452 4464516 D PFAM: LacI family transcriptional regulator; KEGG: gka:GK3275 transcriptional regulator (LacI family); LacI family transcriptional regulator 4463452..4464516 Clostridium beijerinckii NCIMB 8052 5295041 YP_001310952.1 CDS Cbei_3882 NC_009617.1 4464655 4466007 R KEGG: pfa:MAL8P1.12 hypothetical protein; hypothetical protein complement(4464655..4466007) Clostridium beijerinckii NCIMB 8052 5295042 YP_001310953.1 CDS Cbei_3883 NC_009617.1 4466026 4467228 R KEGG: swo:Swol_0181 ABC-type multidrug transport system permease component; multidrug ABC transporter permease complement(4466026..4467228) Clostridium beijerinckii NCIMB 8052 5295043 YP_001310954.1 CDS Cbei_3884 NC_009617.1 4467203 4468393 R KEGG: swo:Swol_2449 ABC-type multidrug transport system permease component; multidrug ABC transporter permease complement(4467203..4468393) Clostridium beijerinckii NCIMB 8052 5295044 YP_001310955.1 CDS Cbei_3885 NC_009617.1 4468407 4469456 R PFAM: secretion protein HlyD family protein; KEGG: pgi:PG0093 HlyD family secretion protein; secretion protein HlyD family protein complement(4468407..4469456) Clostridium beijerinckii NCIMB 8052 5295045 YP_001310956.1 CDS Cbei_3886 NC_009617.1 4469706 4470263 D KEGG: bld:BLi00563 TetR; TetR family transcriptional regulator 4469706..4470263 Clostridium beijerinckii NCIMB 8052 5295046 YP_001310957.1 CDS Cbei_3887 NC_009617.1 4470537 4471649 R PFAM: protein of unknown function DUF1349; KEGG: btk:BT9727_2931 hypothetical protein; hypothetical protein complement(4470537..4471649) Clostridium beijerinckii NCIMB 8052 5295047 YP_001310958.1 CDS Cbei_3888 NC_009617.1 4471875 4473071 R PFAM: major facilitator superfamily MFS_1; KEGG: cth:Cthe_2967 major facilitator superfamily MFS_1; major facilitator superfamily transporter complement(4471875..4473071) Clostridium beijerinckii NCIMB 8052 5295048 YP_001310959.1 CDS Cbei_3889 NC_009617.1 4473183 4473824 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: plu:plu0475 hypothetical protein; HAD family hydrolase complement(4473183..4473824) Clostridium beijerinckii NCIMB 8052 5295049 YP_001310960.1 CDS Cbei_3890 NC_009617.1 4473840 4474889 R PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: plu:plu0474 hypothetical protein; alcohol dehydrogenase complement(4473840..4474889) Clostridium beijerinckii NCIMB 8052 5295050 YP_001310961.1 CDS Cbei_3891 NC_009617.1 4474877 4476154 R PFAM: aminotransferase class-III; KEGG: plu:plu0473 hypothetical protein; class III aminotransferase complement(4474877..4476154) Clostridium beijerinckii NCIMB 8052 5295051 YP_001310962.1 CDS Cbei_3892 NC_009617.1 4476759 4477172 D KEGG: ssa:SSA_0360 conserved uncharacterized protein; hypothetical protein 4476759..4477172 Clostridium beijerinckii NCIMB 8052 5295052 YP_001310963.1 CDS Cbei_3893 NC_009617.1 4477174 4477617 D PFAM: regulatory protein, MarR; KEGG: ssa:SSA_0255 multiple antibiotic resistance operon transcription repressor (MarR); MarR family transcriptional regulator 4477174..4477617 Clostridium beijerinckii NCIMB 8052 5295053 YP_001310964.1 CDS Cbei_3894 NC_009617.1 4477850 4478404 R PFAM: GCN5-related N-acetyltransferase; KEGG: ddi:DDBDRAFT_0206477 hypothetical protein; N-acetyltransferase GCN5 complement(4477850..4478404) Clostridium beijerinckii NCIMB 8052 5295054 YP_001310965.1 CDS Cbei_3895 NC_009617.1 4478488 4479294 R PFAM: NADPH-dependent FMN reductase; KEGG: mst:Msp_1469 predicted iron-sulfur flavoprotein; NADPH-dependent FMN reductase complement(4478488..4479294) Clostridium beijerinckii NCIMB 8052 5295055 YP_001310966.1 CDS Cbei_3896 NC_009617.1 4479373 4480080 R PFAM: transcriptional regulator PadR family protein; KEGG: cac:CAC0832 fusion: transcriptional regulator and conserved domain; PadR-like family transcriptional regulator complement(4479373..4480080) Clostridium beijerinckii NCIMB 8052 5295056 YP_001310967.1 CDS Cbei_3897 NC_009617.1 4480200 4480745 R hypothetical protein complement(4480200..4480745) Clostridium beijerinckii NCIMB 8052 5295057 YP_001310968.1 CDS Cbei_3898 NC_009617.1 4480898 4481734 R PFAM: helix-turn-helix- domain containing protein, AraC type; transcription activator, effector binding; KEGG: btl:BALH_2732 transcriptional regulator, AraC family; transcription activator, effector binding complement(4480898..4481734) Clostridium beijerinckii NCIMB 8052 5295058 YP_001310969.1 CDS Cbei_3899 NC_009617.1 4482048 4483139 R KEGG: ctc:CTC01816 hypothetical protein; hypothetical protein complement(4482048..4483139) Clostridium beijerinckii NCIMB 8052 5295059 YP_001310970.1 CDS Cbei_3900 NC_009617.1 4483153 4483686 R TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: cac:CAC1766 RNA polymerase sigma-70 factor; ECF subfamily RNA polymerase sigma-24 factor complement(4483153..4483686) Clostridium beijerinckii NCIMB 8052 5295060 YP_001310971.1 CDS Cbei_3901 NC_009617.1 4484127 4484990 R PFAM: GCN5-related N-acetyltransferase; KEGG: btl:BALH_1852 acetyltransferase, GNAT family; N-acetyltransferase GCN5 complement(4484127..4484990) Clostridium beijerinckii NCIMB 8052 5295061 YP_001310972.1 CDS Cbei_3902 NC_009617.1 4485003 4485767 R PFAM: LuxR family transcriptional regulator; KEGG: cac:CAC0445 protein, containing LuxR family transcriptional regulator HTH domain; LuxR family transcriptional regulator complement(4485003..4485767) Clostridium beijerinckii NCIMB 8052 5295062 YP_001310973.1 CDS Cbei_3903 NC_009617.1 4486238 4487173 R PFAM: helix-turn-helix- domain containing protein, AraC type; AraC-type transcriptional regulator domain protein; KEGG: pau:PA14_38040 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(4486238..4487173) Clostridium beijerinckii NCIMB 8052 5295063 YP_001310974.1 CDS Cbei_3904 NC_009617.1 4487379 4488119 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: nmu:Nmul_A1378 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4487379..4488119 Clostridium beijerinckii NCIMB 8052 5295064 YP_001310975.1 CDS Cbei_3906 NC_009617.1 4488784 4489323 R PFAM: nitroreductase; KEGG: cac:CAC1418 nitroreductase; nitroreductase complement(4488784..4489323) Clostridium beijerinckii NCIMB 8052 5296430 YP_001310976.1 CDS Cbei_3907 NC_009617.1 4489431 4489925 R KEGG: ooe:OEOE_0717 acetyltransferase, including N-acetylase of ribosomal protein; ribosomal protein N-acetylase complement(4489431..4489925) Clostridium beijerinckii NCIMB 8052 5295066 YP_001310977.1 CDS Cbei_3909 NC_009617.1 4490182 4490781 R KEGG: lpl:lp_1933 galactoside O-acetyltransferase; galactoside O-acetyltransferase complement(4490182..4490781) Clostridium beijerinckii NCIMB 8052 5296431 YP_001310978.1 CDS Cbei_3910 NC_009617.1 4490869 4491579 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: lpl:lp_1934 transcription regulator; RpiR family transcriptional regulator complement(4490869..4491579) Clostridium beijerinckii NCIMB 8052 5295068 YP_001310979.1 CDS Cbei_3911 NC_009617.1 4491669 4492286 R hypothetical protein complement(4491669..4492286) Clostridium beijerinckii NCIMB 8052 5295069 YP_001310980.1 CDS Cbei_3912 NC_009617.1 4492487 4493005 R PFAM: VanZ family protein; KEGG: ctc:CTC01412 hypothetical protein; VanZ family protein complement(4492487..4493005) Clostridium beijerinckii NCIMB 8052 5295070 YP_001310981.1 CDS Cbei_3913 NC_009617.1 4493435 4494151 R PFAM: pentapeptide repeat protein; KEGG: fal:FRAAL2569 hypothetical protein; pentapeptide repeat-containing protein complement(4493435..4494151) Clostridium beijerinckii NCIMB 8052 5295071 YP_001310982.1 CDS Cbei_3914 NC_009617.1 4494166 4494495 R PFAM: transcriptional regulator PadR family protein; KEGG: fal:FRAAL2570 PadR family transcriptional regulator; PadR-like family transcriptional regulator complement(4494166..4494495) Clostridium beijerinckii NCIMB 8052 5295072 YP_001310983.1 CDS Cbei_3915 NC_009617.1 4494974 4495396 D PFAM: regulatory protein, MarR; KEGG: eba:ebA3908 transcriptional regulator, MarR family; MarR family transcriptional regulator 4494974..4495396 Clostridium beijerinckii NCIMB 8052 5295073 YP_001310984.1 CDS Cbei_3916 NC_009617.1 4495400 4496602 D PFAM: major facilitator superfamily MFS_1; KEGG: ssp:SSP2167 permease of the major facilitator superfamily; major facilitator superfamily transporter 4495400..4496602 Clostridium beijerinckii NCIMB 8052 5295074 YP_001310985.1 CDS Cbei_3917 NC_009617.1 4496856 4497116 R hypothetical protein complement(4496856..4497116) Clostridium beijerinckii NCIMB 8052 5295075 YP_001310986.1 CDS Cbei_3918 NC_009617.1 4497441 4498124 R PFAM: lipolytic protein, G-D-S-L family; KEGG: bld:BLi04100 hypothetical protein; GDSL family lipase complement(4497441..4498124) Clostridium beijerinckii NCIMB 8052 5295076 YP_001310987.1 CDS Cbei_3919 NC_009617.1 4498180 4498470 R hypothetical protein complement(4498180..4498470) Clostridium beijerinckii NCIMB 8052 5295077 YP_001310988.1 CDS Cbei_3920 NC_009617.1 4499140 4500192 R KEGG: ter:Tery_0801 galactoside ABC transporter; galactoside ABC transporter complement(4499140..4500192) Clostridium beijerinckii NCIMB 8052 5295078 YP_001310989.1 CDS Cbei_3921 NC_009617.1 4500465 4500995 R hypothetical protein complement(4500465..4500995) Clostridium beijerinckii NCIMB 8052 5295079 YP_001310990.1 CDS Cbei_3922 NC_009617.1 4502003 4502716 R PFAM: Phosphoglycerate mutase; KEGG: cac:CAC0167 possible sigma factor, diverged member of sigF/sigE/sigG family; phosphoglycerate mutase complement(4502003..4502716) Clostridium beijerinckii NCIMB 8052 5295080 YP_001310991.1 CDS Cbei_3923 NC_009617.1 4503299 4504564 R PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: cpf:CPF_0863 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase complement(4503299..4504564) Clostridium beijerinckii NCIMB 8052 5295081 YP_001310992.1 CDS Cbei_3924 NC_009617.1 4505162 4505515 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cac:CAC3356 lactoylglutathione lyase (LGUL) family protein, diverged; glyoxalase/bleomycin resistance protein/dioxygenase complement(4505162..4505515) Clostridium beijerinckii NCIMB 8052 5295082 YP_001310993.1 CDS Cbei_3925 NC_009617.1 4505542 4506189 R PFAM: cyclase family protein; KEGG: ctc:CTC01833 hypothetical protein; cyclase family protein complement(4505542..4506189) Clostridium beijerinckii NCIMB 8052 5295083 YP_001310994.1 CDS Cbei_3928 NC_009617.1 4507476 4508018 R TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; KEGG: cpr:CPR_0564 signal peptidase I; signal peptidase I complement(4507476..4508018) Clostridium beijerinckii NCIMB 8052 5296433 YP_001310995.1 CDS Cbei_3929 NC_009617.1 4508209 4508709 R PFAM: GCN5-related N-acetyltransferase; KEGG: bha:BH0433 phosphinothricin N-acetyltransferase; N-acetyltransferase GCN5 complement(4508209..4508709) Clostridium beijerinckii NCIMB 8052 5295085 YP_001310996.1 CDS Cbei_3930 NC_009617.1 4509532 4509807 R hypothetical protein complement(4509532..4509807) Clostridium beijerinckii NCIMB 8052 5295086 YP_001310997.1 CDS Cbei_3931 NC_009617.1 4510181 4512943 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: cth:Cthe_0511 histidine kinase; PAS/PAC sensor signal transduction histidine kinase complement(4510181..4512943) Clostridium beijerinckii NCIMB 8052 5295087 YP_001310998.1 CDS Cbei_3932 NC_009617.1 4513339 4514151 R PFAM: alpha/beta hydrolase fold; KEGG: ctc:CTC01150 non-heme chloroperoxidase; alpha/beta fold family hydrolase complement(4513339..4514151) Clostridium beijerinckii NCIMB 8052 5295088 YP_001310999.1 CDS Cbei_3933 NC_009617.1 4514225 4514608 R hypothetical protein complement(4514225..4514608) Clostridium beijerinckii NCIMB 8052 5295089 YP_001311000.1 CDS Cbei_3934 NC_009617.1 4514956 4515276 D hypothetical protein 4514956..4515276 Clostridium beijerinckii NCIMB 8052 5295090 YP_001311001.1 CDS Cbei_3935 NC_009617.1 4515670 4516716 D KEGG: cpe:CPE1341 probable galactoside ABC transporter; galactoside ABC transporter 4515670..4516716 Clostridium beijerinckii NCIMB 8052 5295091 YP_001311002.1 CDS Cbei_3936 NC_009617.1 4517231 4518013 R PFAM: cell wall binding repeat-containing protein; KEGG: dsy:DSY2648 hypothetical protein; cell wall binding repeat-containing protein complement(4517231..4518013) Clostridium beijerinckii NCIMB 8052 5295092 YP_001311003.1 CDS Cbei_3937 NC_009617.1 4518313 4518741 R PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC1468 predicted acetyltransferase; N-acetyltransferase GCN5 complement(4518313..4518741) Clostridium beijerinckii NCIMB 8052 5295093 YP_001311004.1 CDS Cbei_3938 NC_009617.1 4518875 4519165 R hypothetical protein complement(4518875..4519165) Clostridium beijerinckii NCIMB 8052 5295094 YP_001311005.1 CDS Cbei_3939 NC_009617.1 4520038 4521084 R KEGG: ctc:CTC00860 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein complement(4520038..4521084) Clostridium beijerinckii NCIMB 8052 5295095 YP_001311006.1 CDS Cbei_3940 NC_009617.1 4521248 4521697 R PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC2539 predicted acetyltransferase; N-acetyltransferase GCN5 complement(4521248..4521697) Clostridium beijerinckii NCIMB 8052 5295096 YP_001311007.1 CDS Cbei_3941 NC_009617.1 4521787 4522263 D hypothetical protein 4521787..4522263 Clostridium beijerinckii NCIMB 8052 5295097 YP_001311008.1 CDS Cbei_3942 NC_009617.1 4522293 4522847 R PFAM: GCN5-related N-acetyltransferase; KEGG: bat:BAS2577 acetyltransferase, GNAT family; N-acetyltransferase GCN5 complement(4522293..4522847) Clostridium beijerinckii NCIMB 8052 5295098 YP_001311009.1 CDS Cbei_3943 NC_009617.1 4522960 4523403 R PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC3445 predicted acetyltransferase; N-acetyltransferase GCN5 complement(4522960..4523403) Clostridium beijerinckii NCIMB 8052 5295099 YP_001311010.1 CDS Cbei_3944 NC_009617.1 4523836 4524153 D hypothetical protein 4523836..4524153 Clostridium beijerinckii NCIMB 8052 5295100 YP_001311011.1 CDS Cbei_3945 NC_009617.1 4524364 4525086 R PFAM: metallophosphoesterase; KEGG: bha:BH1859 hypothetical protein; metallophosphoesterase complement(4524364..4525086) Clostridium beijerinckii NCIMB 8052 5295101 YP_001311012.1 CDS Cbei_3946 NC_009617.1 4525426 4525674 R hypothetical protein complement(4525426..4525674) Clostridium beijerinckii NCIMB 8052 5295102 YP_001311013.1 CDS Cbei_3947 NC_009617.1 4526681 4527037 R PFAM: helix-turn-helix, HxlR type; KEGG: cac:CAC2934 predicted transcriptional regulator; HxlR family transcriptional regulator complement(4526681..4527037) Clostridium beijerinckii NCIMB 8052 5295103 YP_001311014.1 CDS Cbei_3948 NC_009617.1 4527199 4528014 D PFAM: nitroreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cac:CAC2933 ferredoxin-like domain fused to nitroreductase-like domain; nitroreductase 4527199..4528014 Clostridium beijerinckii NCIMB 8052 5295104 YP_001311015.1 CDS Cbei_3949 NC_009617.1 4528594 4528917 D hypothetical protein 4528594..4528917 Clostridium beijerinckii NCIMB 8052 5295105 YP_001311016.1 CDS Cbei_3950 NC_009617.1 4529121 4529333 R PFAM: LexA DNA-binding domain protein; KEGG: bha:BH2356 transcriptional repressor of the SOS regulon; LexA family transcriptional regulator complement(4529121..4529333) Clostridium beijerinckii NCIMB 8052 5295106 YP_001311017.1 CDS Cbei_3951 NC_009617.1 4529596 4530453 R PFAM: protein of unknown function DUF161; KEGG: cac:CAC1325 uncharacterized conserved protein, YitT (B.subtilis) family; hypothetical protein complement(4529596..4530453) Clostridium beijerinckii NCIMB 8052 5295107 YP_001311018.1 CDS Cbei_3952 NC_009617.1 4530638 4531369 R PFAM: protein of unknown function DUF81; KEGG: dar:Daro_3914 protein of unknown function DUF81; hypothetical protein complement(4530638..4531369) Clostridium beijerinckii NCIMB 8052 5295108 YP_001311019.1 CDS Cbei_3953 NC_009617.1 4531530 4533245 R PFAM: chemotaxis sensory transducer; KEGG: cac:CAC2803 membrane associated methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(4531530..4533245) Clostridium beijerinckii NCIMB 8052 5295109 YP_001311020.1 CDS Cbei_3954 NC_009617.1 4533223 4533669 R PFAM: CheW domain protein; KEGG: pca:Pcar_0546 CheW protein; CheW protein complement(4533223..4533669) Clostridium beijerinckii NCIMB 8052 5295110 YP_001311021.1 CDS Cbei_3955 NC_009617.1 4533849 4534160 D hypothetical protein 4533849..4534160 Clostridium beijerinckii NCIMB 8052 5295111 YP_001311022.1 CDS Cbei_3956 NC_009617.1 4534211 4534528 D hypothetical protein 4534211..4534528 Clostridium beijerinckii NCIMB 8052 5295112 YP_001311023.1 CDS Cbei_3957 NC_009617.1 4534803 4535195 R KEGG: cpf:CPF_1072 hypothetical protein; hypothetical protein complement(4534803..4535195) Clostridium beijerinckii NCIMB 8052 5295113 YP_001311024.1 CDS Cbei_3958 NC_009617.1 4535484 4536281 R KEGG: cac:CAC0070 hypothetical protein; hypothetical protein complement(4535484..4536281) Clostridium beijerinckii NCIMB 8052 5295114 YP_001311025.1 CDS Cbei_3959 NC_009617.1 4536455 4536808 D PFAM: helix-turn-helix domain protein; KEGG: cno:NT01CX_2201 transcriptional regulator; XRE family transcriptional regulator 4536455..4536808 Clostridium beijerinckii NCIMB 8052 5295115 YP_001311026.1 CDS Cbei_3960 NC_009617.1 4536789 4537448 D PFAM: protein of unknown function DUF955; KEGG: cno:NT01CX_2202 hypothetical protein; hypothetical protein 4536789..4537448 Clostridium beijerinckii NCIMB 8052 5295116 YP_001311027.1 CDS Cbei_3961 NC_009617.1 4537695 4539665 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY4790 hypothetical protein; methyl-accepting chemotaxis sensory transducer complement(4537695..4539665) Clostridium beijerinckii NCIMB 8052 5295117 YP_001311028.1 CDS Cbei_3962 NC_009617.1 4539930 4541453 R PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; proteinase inhibitor I9, subtilisin propeptide; KEGG: bsu:BG10561 minor extracellular serine protease; peptidase S8/S53 subtilisin kexin sedolisin complement(4539930..4541453) Clostridium beijerinckii NCIMB 8052 5295118 YP_001311029.1 CDS Cbei_3963 NC_009617.1 4542233 4542475 R hypothetical protein complement(4542233..4542475) Clostridium beijerinckii NCIMB 8052 5295119 YP_001311030.1 CDS Cbei_3964 NC_009617.1 4548650 4549585 R PFAM: CHAP domain containing protein; SMART: SH3 domain protein domain protein; KEGG: cpr:CPR_B0001 bacteriocin; CHAP domain-containing protein complement(4548650..4549585) Clostridium beijerinckii NCIMB 8052 5296436 YP_001311031.1 CDS Cbei_3965 NC_009617.1 4549882 4550484 D PFAM: Accessory gene regulator B; KEGG: cno:NT01CX_2060 AgrB-like protein; accessory gene regulator B 4549882..4550484 Clostridium beijerinckii NCIMB 8052 5295121 YP_001311032.1 CDS Cbei_3966 NC_009617.1 4550539 4551789 R SMART: ATP-binding region, ATPase domain protein domain protein; KEGG: cno:NT01CX_2062 accessory gene regulator protein C; signal transduction histidine kinase regulating citrate/malate metabolism complement(4550539..4551789) Clostridium beijerinckii NCIMB 8052 5295122 YP_001311033.1 CDS Cbei_3967 NC_009617.1 4551783 4552550 R PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: sao:SAOUHSC_00231 two-component response regulator; LytTR family two component transcriptional regulator complement(4551783..4552550) Clostridium beijerinckii NCIMB 8052 5295123 YP_001311034.1 CDS Cbei_3968 NC_009617.1 4552877 4554067 R PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: cth:Cthe_1383 tetratricopeptide TPR_2; hypothetical protein complement(4552877..4554067) Clostridium beijerinckii NCIMB 8052 5295124 YP_001311035.1 CDS Cbei_3969 NC_009617.1 4554350 4555723 R PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: cpe:CPE0406 probable reticuline oxidase; FAD linked oxidase domain-containing protein complement(4554350..4555723) Clostridium beijerinckii NCIMB 8052 5295125 YP_001311036.1 CDS Cbei_3970 NC_009617.1 4555954 4556112 D PFAM: small acid-soluble spore H family protein; small acid-soluble spore H family protein 4555954..4556112 Clostridium beijerinckii NCIMB 8052 5295126 YP_001311037.1 CDS Cbei_3971 NC_009617.1 4556966 4557886 R KEGG: rso:RSc2523 transmembrane protein; hypothetical protein complement(4556966..4557886) Clostridium beijerinckii NCIMB 8052 5295127 YP_001311038.1 CDS Cbei_3972 NC_009617.1 4558586 4559980 R PFAM: amino acid permease-associated region; KEGG: cac:CAC1472 amino acid permease; amino acid permease-associated protein complement(4558586..4559980) Clostridium beijerinckii NCIMB 8052 5295128 YP_001311039.1 CDS Cbei_3973 NC_009617.1 4560809 4561234 R PFAM: regulatory protein, MerR; KEGG: cac:CA_P0178 transcriptional regulator, MerR family; MerR family transcriptional regulator complement(4560809..4561234) Clostridium beijerinckii NCIMB 8052 5295129 YP_001311040.1 CDS Cbei_3974 NC_009617.1 4561348 4562343 R PFAM: aldo/keto reductase; KEGG: bad:BAD_0873 possible reductase; aldo/keto reductase complement(4561348..4562343) Clostridium beijerinckii NCIMB 8052 5295130 YP_001311041.1 CDS Cbei_3975 NC_009617.1 4562530 4563480 R PFAM: cell wall binding repeat-containing protein; SMART: transglutaminase domain protein; KEGG: ctc:CTC00472 transglutaminase-like predicted protease; cell wall binding repeat-containing protein complement(4562530..4563480) Clostridium beijerinckii NCIMB 8052 5295131 YP_001311042.1 CDS Cbei_3976 NC_009617.1 4563824 4564177 R hypothetical protein complement(4563824..4564177) Clostridium beijerinckii NCIMB 8052 5295132 YP_001311043.1 CDS Cbei_3977 NC_009617.1 4564450 4565436 R TIGRFAM: peptide ABC transporter ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter C-terminal domain protein; SMART: ATPase AAA; KEGG: cac:CAC3635 oligopeptide ABC transporter ATPase component; peptide ABC transporter ATPase complement(4564450..4565436) Clostridium beijerinckii NCIMB 8052 5295133 YP_001311044.1 CDS Cbei_3978 NC_009617.1 4565429 4566418 R TIGRFAM: peptide ABC transporter ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter C-terminal domain protein; SMART: ATPase AAA; KEGG: cac:CAC0179 oligopeptide transport ATP-binding protein; peptide ABC transporter ATPase complement(4565429..4566418) Clostridium beijerinckii NCIMB 8052 5295134 YP_001311045.1 CDS Cbei_3979 NC_009617.1 4566431 4567273 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH1036 oligopeptide ABC transporter permease; binding-protein-dependent transport system inner membrane protein complement(4566431..4567273) Clostridium beijerinckii NCIMB 8052 5295135 YP_001311046.1 CDS Cbei_3980 NC_009617.1 4567286 4568257 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpf:CPF_2554 oligopeptide/dipeptide ABC transporter permease; binding-protein-dependent transport system inner membrane protein complement(4567286..4568257) Clostridium beijerinckii NCIMB 8052 5295136 YP_001311047.1 CDS Cbei_3981 NC_009617.1 4568360 4570036 R PFAM: extracellular solute-binding protein, family 5; KEGG: cpr:CPR_2258 bacterial extracellular solute-binding proteins, family 5 superfamily; extracellular solute-binding protein complement(4568360..4570036) Clostridium beijerinckii NCIMB 8052 5295137 YP_001311048.1 CDS Cbei_3982 NC_009617.1 4570332 4570760 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: cac:CA_P0174 membrane protein; hypothetical protein complement(4570332..4570760) Clostridium beijerinckii NCIMB 8052 5295138 YP_001311049.1 CDS Cbei_3983 NC_009617.1 4570801 4573152 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cth:Cthe_0511 histidine kinase; PAS/PAC sensor signal transduction histidine kinase complement(4570801..4573152) Clostridium beijerinckii NCIMB 8052 5295139 YP_001311050.1 CDS Cbei_3984 NC_009617.1 4573537 4574970 R PFAM: glycoside hydrolase, family 1; KEGG: yen:YE1417 6-phospho-beta-glucosidase; glycoside hydrolase complement(4573537..4574970) Clostridium beijerinckii NCIMB 8052 5295140 YP_001311051.1 CDS Cbei_3985 NC_009617.1 4575141 4576598 D KEGG: tte:TTE2242 transposase; transposase 4575141..4576598 Clostridium beijerinckii NCIMB 8052 5295141 YP_001311052.1 CDS Cbei_3986 NC_009617.1 4577304 4578338 R PFAM: cell wall binding repeat-containing protein; SCP-like extracellular; KEGG: sth:STH564 hypothetical protein; SCP-like extracellular protein complement(4577304..4578338) Clostridium beijerinckii NCIMB 8052 5295142 YP_001311053.1 CDS Cbei_3987 NC_009617.1 4578866 4579366 R KEGG: cth:Cthe_1780 hypothetical protein; hypothetical protein complement(4578866..4579366) Clostridium beijerinckii NCIMB 8052 5295143 YP_001311054.1 CDS Cbei_3988 NC_009617.1 4579733 4580536 D PFAM: Abortive infection protein; KEGG: sdn:Sden_0892 abortive infection protein; abortive infection protein 4579733..4580536 Clostridium beijerinckii NCIMB 8052 5295144 YP_001311055.1 CDS Cbei_3989 NC_009617.1 4580923 4582158 R PFAM: Beta-ketoacyl synthase-like; KEGG: cth:Cthe_0932 beta-ketoacyl synthase; beta-ketoacyl synthase-like protein complement(4580923..4582158) Clostridium beijerinckii NCIMB 8052 5295145 YP_001311056.1 CDS Cbei_3990 NC_009617.1 4582462 4583355 D PFAM: helix-turn-helix- domain containing protein, AraC type; transcription activator, effector binding; KEGG: bha:BH3506 transcriptional regulator (AraC/XylS family); transcription activator, effector binding 4582462..4583355 Clostridium beijerinckii NCIMB 8052 5295146 YP_001311057.1 CDS Cbei_3991 NC_009617.1 4583465 4584106 D KEGG: fra:Francci3_2694 hypothetical protein; hypothetical protein 4583465..4584106 Clostridium beijerinckii NCIMB 8052 5295147 YP_001311058.1 CDS Cbei_3992 NC_009617.1 4584645 4585937 R PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: cac:CAC1422 uncharacterized hypothetical protein, YUGS B.subtilis ortholog; hypothetical protein complement(4584645..4585937) Clostridium beijerinckii NCIMB 8052 5295148 YP_001311059.1 CDS Cbei_3993 NC_009617.1 4586829 4587875 D KEGG: cpr:CPR_1341 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein 4586829..4587875 Clostridium beijerinckii NCIMB 8052 5295149 YP_001311060.1 CDS Cbei_3994 NC_009617.1 4587958 4588419 R KEGG: cpf:CPF_0972 hypothetical protein; hypothetical protein complement(4587958..4588419) Clostridium beijerinckii NCIMB 8052 5295150 YP_001311061.1 CDS Cbei_3995 NC_009617.1 4588885 4589211 D hypothetical protein 4588885..4589211 Clostridium beijerinckii NCIMB 8052 5295151 YP_001311062.1 CDS Cbei_3996 NC_009617.1 4589240 4589782 R TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; KEGG: cpf:CPF_0578 signal peptidase I; signal peptidase I complement(4589240..4589782) Clostridium beijerinckii NCIMB 8052 5295152 YP_001311063.1 CDS Cbei_3997 NC_009617.1 4590064 4590879 R PFAM: alpha/beta hydrolase fold; KEGG: cac:CAC2688 alpha/beta superfamily hydrolase (possible chloroperoxidase); alpha/beta fold family hydrolase complement(4590064..4590879) Clostridium beijerinckii NCIMB 8052 5295153 YP_001311064.1 CDS Cbei_3998 NC_009617.1 4591109 4591969 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: llm:llmg_1124 conserved hypothetical protein; rRNA (guanine-N(1)-)-methyltransferase complement(4591109..4591969) Clostridium beijerinckii NCIMB 8052 5295154 YP_001311065.1 CDS Cbei_3999 NC_009617.1 4592022 4592810 R PFAM: protein of unknown function DUF218; KEGG: cpf:CPF_1006 hypothetical protein; hypothetical protein complement(4592022..4592810) Clostridium beijerinckii NCIMB 8052 5295155 YP_001311066.1 CDS Cbei_4000 NC_009617.1 4593279 4594871 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; iron hydrogenase, small subunit; hydrogenase large subunit domain protein; KEGG: cpr:CPR_2341 iron hydrogenase; ferredoxin hydrogenase complement(4593279..4594871) Clostridium beijerinckii NCIMB 8052 5295156 YP_001311067.1 CDS Cbei_4001 NC_009617.1 4595101 4595484 D PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: dsy:DSY0576 hypothetical protein; helix-turn-helix domain-containing protein 4595101..4595484 Clostridium beijerinckii NCIMB 8052 5295157 YP_001311068.1 CDS Cbei_4002 NC_009617.1 4595521 4596099 D PFAM: peptidase S14, ClpP; KEGG: cac:CAC2640 protease subunits of ATP-dependent protease, ClpP; endopeptidase Clp 4595521..4596099 Clostridium beijerinckii NCIMB 8052 5295158 YP_001311069.1 CDS Cbei_4003 NC_009617.1 4596240 4597007 D PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: cpr:CPR_2121 exonuclease family protein; exonuclease 4596240..4597007 Clostridium beijerinckii NCIMB 8052 5295159 YP_001311070.1 CDS Cbei_4004 NC_009617.1 4597100 4597795 R PFAM: response regulator receiver; KEGG: ctc:CTC01523 transcriptional regulatory protein; response regulator receiver complement(4597100..4597795) Clostridium beijerinckii NCIMB 8052 5295160 YP_001311071.1 CDS Cbei_4005 NC_009617.1 4597800 4599374 R PFAM: ATP-binding region, ATPase domain protein domain protein; PAS fold domain protein; KEGG: ctc:CTC01524 sensor kinase DpiB; signal transduction histidine kinase regulating citrate/malate metabolism complement(4597800..4599374) Clostridium beijerinckii NCIMB 8052 5295161 YP_001311072.1 CDS Cbei_4006 NC_009617.1 4599639 4600709 R catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase complement(4599639..4600709) Clostridium beijerinckii NCIMB 8052 5295162 YP_001311073.1 CDS Cbei_4007 NC_009617.1 4600892 4601866 R transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease complement(4600892..4601866) Clostridium beijerinckii NCIMB 8052 5295163 YP_001311074.1 CDS Cbei_4008 NC_009617.1 4602069 4603241 R PFAM: UBA/THIF-type NAD/FAD binding protein; malic protein domain protein; malic protein, NAD-binding; KEGG: cpr:CPR_0140 NAD-dependent malic enzyme; malate dehydrogenase complement(4602069..4603241) Clostridium beijerinckii NCIMB 8052 5295164 YP_001311075.1 CDS Cbei_4009 NC_009617.1 4603584 4604399 R KEGG: bcl:ABC0828 hypothetical protein; hypothetical protein complement(4603584..4604399) Clostridium beijerinckii NCIMB 8052 5295165 YP_001311076.1 CDS Cbei_4010 NC_009617.1 4604468 4604983 R PFAM: regulatory protein, AsnC/Lrp family; KEGG: cac:CAC1467 transcriptional regulator, Lrp family; AsnC family transcriptional regulator complement(4604468..4604983) Clostridium beijerinckii NCIMB 8052 5295166 YP_001311077.1 CDS Cbei_4011 NC_009617.1 4605054 4605476 D KEGG: cac:CAC1466 hypothetical protein; hypothetical protein 4605054..4605476 Clostridium beijerinckii NCIMB 8052 5295167 YP_001311078.1 CDS Cbei_4012 NC_009617.1 4605538 4607337 R PFAM: chemotaxis sensory transducer; Heme NO binding domain protein; KEGG: cno:NT01CX_1000 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(4605538..4607337) Clostridium beijerinckii NCIMB 8052 5295168 YP_001311079.1 CDS Cbei_4013 NC_009617.1 4607697 4609214 D PFAM: GntR family transcriptional regulator; aminotransferase, class I and II; KEGG: cpf:CPF_0356 transcriptional regulator, GntR family/aminotransferase; GntR family transcriptional regulator 4607697..4609214 Clostridium beijerinckii NCIMB 8052 5295169 YP_001311080.1 CDS Cbei_4014 NC_009617.1 4609297 4610637 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: ayw:AYWB_324 NADH oxidase H2O2-forming; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(4609297..4610637) Clostridium beijerinckii NCIMB 8052 5295170 YP_001311081.1 CDS Cbei_4015 NC_009617.1 4610932 4611333 R PFAM: response regulator receiver; KEGG: cth:Cthe_0805 response regulator receiver protein; response regulator receiver protein complement(4610932..4611333) Clostridium beijerinckii NCIMB 8052 5295171 YP_001311082.1 CDS Cbei_4016 NC_009617.1 4611369 4612877 R PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cth:Cthe_0806 PAS/PAC sensor hybrid histidine kinase; histidine kinase complement(4611369..4612877) Clostridium beijerinckii NCIMB 8052 5295172 YP_001311083.1 CDS Cbei_4017 NC_009617.1 4613059 4615953 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ppd:Ppro_1601 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(4613059..4615953) Clostridium beijerinckii NCIMB 8052 5295173 YP_001311084.1 CDS Cbei_4018 NC_009617.1 4616032 4616535 R PFAM: CheW domain protein; KEGG: cth:Cthe_0809 CheW protein; CheW protein complement(4616032..4616535) Clostridium beijerinckii NCIMB 8052 5295174 YP_001311085.1 CDS Cbei_4019 NC_009617.1 4616559 4618634 R PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; P2 response regulator binding domain protein; KEGG: cth:Cthe_0810 chemotaxis protein CheAs; chemotaxis protein CheA complement(4616559..4618634) Clostridium beijerinckii NCIMB 8052 5295175 YP_001311086.1 CDS Cbei_4020 NC_009617.1 4618659 4619012 R PFAM: response regulator receiver; KEGG: cth:Cthe_0811 response regulator receiver protein; response regulator receiver protein complement(4618659..4619012) Clostridium beijerinckii NCIMB 8052 5295176 YP_001311087.1 CDS Cbei_4021 NC_009617.1 4619585 4620370 R TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: cac:CAC2244 HAD superfamily hydrolases, YkrA B.subtilis ortholog; cof family hydrolase complement(4619585..4620370) Clostridium beijerinckii NCIMB 8052 5295177 YP_001311088.1 CDS Cbei_4022 NC_009617.1 4620559 4622823 D PFAM: glycoside hydrolase, family 3 domain protein; KEGG: cth:Cthe_1256 glycoside hydrolase, family 3-like protein; glycoside hydrolase family protein 4620559..4622823 Clostridium beijerinckii NCIMB 8052 5295178 YP_001311089.1 CDS Cbei_4023 NC_009617.1 4622975 4623739 R PFAM: cell wall hydrolase/autolysin; KEGG: pcu:pc0315 N-acetylmuramoyl-L-alanine amidase; cell wall hydrolase/autolysin complement(4622975..4623739) Clostridium beijerinckii NCIMB 8052 5295179 YP_001311090.1 CDS Cbei_4024 NC_009617.1 4623845 4624798 R PFAM: protein of unknown function DUF6, transmembrane; UAA transporter; KEGG: cac:CAC1538 predicted permease, YCXC B.subtilis ortholog; hypothetical protein complement(4623845..4624798) Clostridium beijerinckii NCIMB 8052 5295180 YP_001311091.1 CDS Cbei_4025 NC_009617.1 4625108 4626001 D KEGG: cno:NT01CX_0633 hypothetical protein; hypothetical protein 4625108..4626001 Clostridium beijerinckii NCIMB 8052 5295181 YP_001311092.1 CDS Cbei_4026 NC_009617.1 4626006 4627097 D KEGG: cac:CAC2427 hypothetical protein; hypothetical protein 4626006..4627097 Clostridium beijerinckii NCIMB 8052 5295182 YP_001311093.1 CDS Cbei_4027 NC_009617.1 4627085 4628059 D TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: cno:NT01CX_0631 activator of 2-hydroxyglutaryl-CoA dehydratase; CoA-substrate-specific enzyme activase 4627085..4628059 Clostridium beijerinckii NCIMB 8052 5295183 YP_001311094.1 CDS Cbei_4028 NC_009617.1 4628154 4629509 R PFAM: amino acid permease-associated region; KEGG: lsa:LSA0125 amino acid/polyamine transport protein; amino acid permease-associated protein complement(4628154..4629509) Clostridium beijerinckii NCIMB 8052 5295184 YP_001311095.1 CDS Cbei_4029 NC_009617.1 4629620 4631080 R PFAM: glycosyl transferase, family 39; KEGG: gka:GK1918 hypothetical protein; glycosyl transferase family protein complement(4629620..4631080) Clostridium beijerinckii NCIMB 8052 5295185 YP_001311096.1 CDS Cbei_4030 NC_009617.1 4631346 4631537 R hypothetical protein complement(4631346..4631537) Clostridium beijerinckii NCIMB 8052 5295186 YP_001311097.1 CDS Cbei_4031 NC_009617.1 4631632 4632498 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cac:CAC2422 oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase; radical SAM domain-containing protein complement(4631632..4632498) Clostridium beijerinckii NCIMB 8052 5295187 YP_001311098.1 CDS Cbei_4032 NC_009617.1 4632746 4633732 R PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: cac:CAC0814 3-oxoacyl-[acyl-carrier-protein] synthase III; beta-ketoacyl-acyl-carrier-protein synthase I complement(4632746..4633732) Clostridium beijerinckii NCIMB 8052 5295188 YP_001311099.1 CDS Cbei_4033 NC_009617.1 4633786 4634118 R hypothetical protein complement(4633786..4634118) Clostridium beijerinckii NCIMB 8052 5295189 YP_001311100.1 CDS Cbei_4034 NC_009617.1 4634458 4635423 R PFAM: protein of unknown function DUF939; KEGG: cac:CAC2484 predicted membrane, YQJA B.subtilis ortholog; hypothetical protein complement(4634458..4635423) Clostridium beijerinckii NCIMB 8052 5295190 YP_001311101.1 CDS Cbei_4035 NC_009617.1 4636333 4637685 D PFAM: GntR family transcriptional regulator; aminotransferase, class I and II; KEGG: bce:BC2526 transcriptional regulator, GntR family; GntR family transcriptional regulator 4636333..4637685 Clostridium beijerinckii NCIMB 8052 5295191 YP_001311102.1 CDS Cbei_4036 NC_009617.1 4637732 4639045 R PFAM: glycoside hydrolase, family 4; KEGG: bce:BC5209 6-phospho-beta-glucosidase; 6-phospho-beta-glucosidase complement(4637732..4639045) Clostridium beijerinckii NCIMB 8052 5295192 YP_001311103.1 CDS Cbei_4037 NC_009617.1 4639464 4640201 R PFAM: YdjC family protein; KEGG: bcl:ABC2079 possible cellobiose phosphotransferase system protein; hypothetical protein complement(4639464..4640201) Clostridium beijerinckii NCIMB 8052 5295193 YP_001311104.1 CDS Cbei_4038 NC_009617.1 4640399 4641757 R KEGG: cac:CAC3434 hypothetical protein; hypothetical protein complement(4640399..4641757) Clostridium beijerinckii NCIMB 8052 5295194 YP_001311105.1 CDS Cbei_4039 NC_009617.1 4641757 4642227 R KEGG: cac:CAC3435 hypothetical protein; hypothetical protein complement(4641757..4642227) Clostridium beijerinckii NCIMB 8052 5295195 YP_001311106.1 CDS Cbei_4040 NC_009617.1 4642628 4643854 R PFAM: peptidase M29, aminopeptidase II; KEGG: cpr:CPR_1965 aminopeptidase; peptidase M29, aminopeptidase II complement(4642628..4643854) Clostridium beijerinckii NCIMB 8052 5295196 YP_001311107.1 CDS Cbei_4041 NC_009617.1 4644157 4645008 R catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta complement(4644157..4645008) Clostridium beijerinckii NCIMB 8052 5295197 YP_001311108.1 CDS Cbei_4042 NC_009617.1 4645008 4646693 R PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cac:CAC2459 2-oxoacid ferredoxin oxidoreductase, alpha subunit; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein complement(4645008..4646693) Clostridium beijerinckii NCIMB 8052 5295198 YP_001311109.1 CDS Cbei_4043 NC_009617.1 4647678 4648226 R PFAM: microcompartments protein; KEGG: dde:Dde_3265 propanediol utilization protein PduT; microcompartments protein complement(4647678..4648226) Clostridium beijerinckii NCIMB 8052 5295199 YP_001311110.1 CDS Cbei_4044 NC_009617.1 4648267 4649592 R PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: dsy:DSY0411 hypothetical protein; respiratory-chain NADH dehydrogenase domain-containing protein complement(4648267..4649592) Clostridium beijerinckii NCIMB 8052 5295200 YP_001311111.1 CDS Cbei_4045 NC_009617.1 4649811 4651229 R PFAM: aldehyde dehydrogenase; KEGG: rru:Rru_A0914 aldehyde dehydrogenase; aldehyde dehydrogenase complement(4649811..4651229) Clostridium beijerinckii NCIMB 8052 5295201 YP_001311112.1 CDS Cbei_4046 NC_009617.1 4651255 4652073 R TIGRFAM: ethanolamine utilization protein EutJ family protein; KEGG: rru:Rru_A0910 ethanolamine utilization protein EutJ; ethanolamine utilization protein EutJ family protein complement(4651255..4652073) Clostridium beijerinckii NCIMB 8052 5295202 YP_001311113.1 CDS Cbei_4047 NC_009617.1 4652113 4652751 R PFAM: Propanediol utilization protein; KEGG: dsy:DSY2876 hypothetical protein; propanediol utilization protein complement(4652113..4652751) Clostridium beijerinckii NCIMB 8052 5295203 YP_001311114.1 CDS Cbei_4048 NC_009617.1 4652788 4653066 R PFAM: microcompartments protein; KEGG: stm:STM2038 Propanediol utilization: polyhedral bodies; microcompartments protein complement(4652788..4653066) Clostridium beijerinckii NCIMB 8052 5295204 YP_001311115.1 CDS Cbei_4049 NC_009617.1 4653100 4653969 R KEGG: rru:Rru_A0923 hypothetical protein; hypothetical protein complement(4653100..4653969) Clostridium beijerinckii NCIMB 8052 5295205 YP_001311116.1 CDS Cbei_4050 NC_009617.1 4653990 4655189 R PFAM: S-adenosylmethionine synthetase; KEGG: rru:Rru_A0917 methionine adenosyltransferase; methionine adenosyltransferase complement(4653990..4655189) Clostridium beijerinckii NCIMB 8052 5295206 YP_001311117.1 CDS Cbei_4051 NC_009617.1 4655219 4656229 R PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: rru:Rru_A0919 two component transcriptional regulator, AraC family; response regulator receiver protein complement(4655219..4656229) Clostridium beijerinckii NCIMB 8052 5295207 YP_001311118.1 CDS Cbei_4052 NC_009617.1 4656232 4657545 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase internal region; KEGG: cpe:CPE0927 two-component sensor histidine kinase; signal transduction histidine kinase LytS complement(4656232..4657545) Clostridium beijerinckii NCIMB 8052 5295208 YP_001311119.1 CDS Cbei_4053 NC_009617.1 4657614 4658765 R PFAM: iron-containing alcohol dehydrogenase; KEGG: lmf:LMOf2365_1174 propanol dehydrogenase; iron-containing alcohol dehydrogenase complement(4657614..4658765) Clostridium beijerinckii NCIMB 8052 5295209 YP_001311120.1 CDS Cbei_4054 NC_009617.1 4658746 4660095 R PFAM: aldehyde dehydrogenase; KEGG: lmf:LMOf2365_1173 CoA-dependent propionaldehyde dehydrogenase; aldehyde dehydrogenase complement(4658746..4660095) Clostridium beijerinckii NCIMB 8052 5295210 YP_001311121.1 CDS Cbei_4055 NC_009617.1 4660133 4660390 R PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: lin:lin1127 hypothetical protein; ethanolamine utilization protein EutN/carboxysome structural protein Ccml complement(4660133..4660390) Clostridium beijerinckii NCIMB 8052 5295211 YP_001311122.1 CDS Cbei_4056 NC_009617.1 4660436 4661059 R PFAM: microcompartments protein; KEGG: lwe:lwe1116 propanediol utilization protein PduK; microcompartments protein complement(4660436..4661059) Clostridium beijerinckii NCIMB 8052 5295212 YP_001311123.1 CDS Cbei_4057 NC_009617.1 4661180 4661953 R hypothetical protein complement(4661180..4661953) Clostridium beijerinckii NCIMB 8052 5295213 YP_001311124.1 CDS Cbei_4058 NC_009617.1 4662034 4662312 R PFAM: microcompartments protein; KEGG: cno:NT01CX_0494 microcompartment protein; microcompartments protein complement(4662034..4662312) Clostridium beijerinckii NCIMB 8052 5295214 YP_001311125.1 CDS Cbei_4059 NC_009617.1 4662473 4663270 R PFAM: microcompartments protein; KEGG: lwe:lwe1110 propanediol utilization protein PduB; microcompartments protein complement(4662473..4663270) Clostridium beijerinckii NCIMB 8052 5295215 YP_001311126.1 CDS Cbei_4060 NC_009617.1 4663300 4664220 R TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Radical SAM domain protein; KEGG: rru:Rru_A0916 pyruvate-formate lyase-activating enzyme; glycyl-radical activating family protein complement(4663300..4664220) Clostridium beijerinckii NCIMB 8052 5295216 YP_001311127.1 CDS Cbei_4061 NC_009617.1 4664312 4666846 R TIGRFAM: pyruvate formate-lyase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL; KEGG: rru:Rru_A0903 pyruvate formate-lyase; pyruvate formate-lyase complement(4664312..4666846) Clostridium beijerinckii NCIMB 8052 5295217 YP_001311128.1 CDS Cbei_4062 NC_009617.1 4666961 4667536 R TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: rru:Rru_A0902 peptidase C56, PfpI; PfpI family intracellular peptidase complement(4666961..4667536) Clostridium beijerinckii NCIMB 8052 5295218 YP_001311129.1 CDS Cbei_4063 NC_009617.1 4667610 4668062 R TIGRFAM: ethanolamine utilization protein, EutP; KEGG: ssa:SSA_0509 propanediol utilization protein; ethanolamine utilization protein, EutP complement(4667610..4668062) Clostridium beijerinckii NCIMB 8052 5295219 YP_001311130.1 CDS Cbei_4064 NC_009617.1 4668071 4668451 R PFAM: microcompartments protein; KEGG: ctc:CTC02181 ethanolamine utilization protein eutS; microcompartments protein complement(4668071..4668451) Clostridium beijerinckii NCIMB 8052 5295220 YP_001311131.1 CDS Cbei_4065 NC_009617.1 4668707 4669159 D PFAM: protein of unknown function DUF336; KEGG: cpr:CPR_1010 hypothetical protein; hypothetical protein 4668707..4669159 Clostridium beijerinckii NCIMB 8052 5295221 YP_001311132.1 CDS Cbei_4066 NC_009617.1 4669208 4669831 D KEGG: bfs:BF3595 hypothetical protein; hypothetical protein 4669208..4669831 Clostridium beijerinckii NCIMB 8052 5295222 YP_001311133.1 CDS Cbei_4067 NC_009617.1 4670009 4671301 R PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: cac:CAC2772 permease; xanthine/uracil/vitamin C permease complement(4670009..4671301) Clostridium beijerinckii NCIMB 8052 5295223 YP_001311134.1 CDS Cbei_4068 NC_009617.1 4672089 4672844 R PFAM: protein of unknown function DUF124; KEGG: cac:CAC0556 uncharacterized conserved protein; hypothetical protein complement(4672089..4672844) Clostridium beijerinckii NCIMB 8052 5295224 YP_001311135.1 CDS Cbei_4069 NC_009617.1 4673219 4673689 R PFAM: iron dependent repressor; KEGG: cac:CAC2616 predicted iron-dependent transcription repressor; iron dependent repressor complement(4673219..4673689) Clostridium beijerinckii NCIMB 8052 5295225 YP_001311136.1 CDS Cbei_4070 NC_009617.1 4673910 4675208 D TIGRFAM: Mn2+/Fe2+ transporter NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: cac:CA_P0063 NRAMP manganese transport protein MntA; manganese transport protein MntH 4673910..4675208 Clostridium beijerinckii NCIMB 8052 5295226 YP_001311137.1 CDS Cbei_4071 NC_009617.1 4675489 4676103 D KEGG: cac:CAC0325 uncharacterized membrane protein, homolog of YtaF B.subtilis; hypothetical protein 4675489..4676103 Clostridium beijerinckii NCIMB 8052 5295227 YP_001311138.1 CDS Cbei_4072 NC_009617.1 4676262 4677212 R TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; KEGG: bar:GBAA5125 L-lactate dehydrogenase; L-lactate dehydrogenase complement(4676262..4677212) Clostridium beijerinckii NCIMB 8052 5295228 YP_001311139.1 CDS Cbei_4073 NC_009617.1 4677303 4678073 R PFAM: LuxR family transcriptional regulator; KEGG: cac:CAC0445 protein, containing LuxR family transcriptional regulator HTH domain; LuxR family transcriptional regulator complement(4677303..4678073) Clostridium beijerinckii NCIMB 8052 5295229 YP_001311140.1 CDS Cbei_4074 NC_009617.1 4678361 4678600 R hypothetical protein complement(4678361..4678600) Clostridium beijerinckii NCIMB 8052 5295230 YP_001311141.1 CDS Cbei_4075 NC_009617.1 4678967 4679278 R KEGG: dsy:DSY0352 hypothetical protein; hypothetical protein complement(4678967..4679278) Clostridium beijerinckii NCIMB 8052 5295231 YP_001311142.1 CDS Cbei_4076 NC_009617.1 4680080 4680979 R TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: ana:all1784 ribokinase; ribokinase complement(4680080..4680979) Clostridium beijerinckii NCIMB 8052 5295232 YP_001311143.1 CDS Cbei_4077 NC_009617.1 4681145 4682842 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC1352 membrane associated chemotaxis sensory transducer protein (MSP domain and HAMP domain); methyl-accepting chemotaxis sensory transducer complement(4681145..4682842) Clostridium beijerinckii NCIMB 8052 5295233 YP_001311144.1 CDS Cbei_4078 NC_009617.1 4682925 4684388 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sus:Acid_6178 periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator complement(4682925..4684388) Clostridium beijerinckii NCIMB 8052 5295234 YP_001311145.1 CDS Cbei_4079 NC_009617.1 4684966 4685523 R KEGG: cno:NT01CX_0007 hypothetical protein; hypothetical protein complement(4684966..4685523) Clostridium beijerinckii NCIMB 8052 5295235 YP_001311146.1 CDS Cbei_4080 NC_009617.1 4686411 4686833 R PFAM: histidine triad (HIT) protein; KEGG: bth:BT_4586 hypothetical protein; histidine triad (HIT) protein complement(4686411..4686833) Clostridium beijerinckii NCIMB 8052 5295236 YP_001311147.1 CDS Cbei_4081 NC_009617.1 4687118 4688623 R KEGG: eca:ECA3560 oligogalacturonide transporter; oligogalacturonide transporter complement(4687118..4688623) Clostridium beijerinckii NCIMB 8052 5295237 YP_001311148.1 CDS Cbei_4082 NC_009617.1 4688662 4690074 R catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase complement(4688662..4690074) Clostridium beijerinckii NCIMB 8052 5295238 YP_001311149.1 CDS Cbei_4083 NC_009617.1 4690487 4692100 R PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain; KEGG: mta:Moth_0429 mannitol dehydrogenase; mannitol dehydrogenase domain-containing protein complement(4690487..4692100) Clostridium beijerinckii NCIMB 8052 5295239 YP_001311150.1 CDS Cbei_4084 NC_009617.1 4692214 4693275 R catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase complement(4692214..4693275) Clostridium beijerinckii NCIMB 8052 5295240 YP_001311151.1 CDS Cbei_4085 NC_009617.1 4693466 4694137 R PFAM: GntR family transcriptional regulator; GntR domain protein; KEGG: bld:BLi01354 hypothetical protein; GntR family transcriptional regulator complement(4693466..4694137) Clostridium beijerinckii NCIMB 8052 5295241 YP_001311152.1 CDS Cbei_4086 NC_009617.1 4694484 4696163 D PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC3397 membrane associated methyl-accepting chemotaxis protein (with HamP domain); methyl-accepting chemotaxis sensory transducer 4694484..4696163 Clostridium beijerinckii NCIMB 8052 5295242 YP_001311153.1 CDS Cbei_4087 NC_009617.1 4696245 4697420 D KEGG: bmb:BruAb2_0422 ABC transporter periplasmic protein; ABC transporter substrate-binding protein 4696245..4697420 Clostridium beijerinckii NCIMB 8052 5295243 YP_001311154.1 CDS Cbei_4088 NC_009617.1 4697500 4699362 R KEGG: cac:CA_P0027 predicted amino acid permeases; amino acid permease complement(4697500..4699362) Clostridium beijerinckii NCIMB 8052 5295244 YP_001311155.1 CDS Cbei_4089 NC_009617.1 4699934 4700230 D KEGG: cpr:CPR_2278 hypothetical protein; hypothetical protein 4699934..4700230 Clostridium beijerinckii NCIMB 8052 5295245 YP_001311156.1 CDS Cbei_4090 NC_009617.1 4700368 4700811 R PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY4363 hypothetical protein; N-acetyltransferase GCN5 complement(4700368..4700811) Clostridium beijerinckii NCIMB 8052 5295246 YP_001311157.1 CDS Cbei_4091 NC_009617.1 4701100 4701255 R hypothetical protein complement(4701100..4701255) Clostridium beijerinckii NCIMB 8052 5295247 YP_001311158.1 CDS Cbei_4092 NC_009617.1 4701408 4702469 R PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: cac:CAC1626 glycerol dehydrogenase; 3-dehydroquinate synthase complement(4701408..4702469) Clostridium beijerinckii NCIMB 8052 5295248 YP_001311159.1 CDS Cbei_4093 NC_009617.1 4702565 4702876 R hypothetical protein complement(4702565..4702876) Clostridium beijerinckii NCIMB 8052 5295249 YP_001311160.1 CDS Cbei_4094 NC_009617.1 4702960 4703151 R PFAM: PspC domain protein; KEGG: bat:BAS4399 hypothetical protein; phage shock protein C complement(4702960..4703151) Clostridium beijerinckii NCIMB 8052 5295250 YP_001311161.1 CDS Cbei_4095 NC_009617.1 4703556 4705271 R PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: cno:NT01CX_1480 dihydroxyacid dehydratase; dihydroxy-acid dehydratase complement(4703556..4705271) Clostridium beijerinckii NCIMB 8052 5295251 YP_001311162.1 CDS Cbei_4096 NC_009617.1 4705502 4706230 R PFAM: GntR family transcriptional regulator; GntR domain protein; KEGG: sph:MGAS10270_Spy1173 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(4705502..4706230) Clostridium beijerinckii NCIMB 8052 5295252 YP_001311163.1 CDS Cbei_4097 NC_009617.1 4706787 4708190 R PFAM: amino acid permease-associated region; KEGG: cno:NT01CX_1994 amino acid permease; amino acid permease-associated protein complement(4706787..4708190) Clostridium beijerinckii NCIMB 8052 5295253 YP_001311164.1 CDS Cbei_4098 NC_009617.1 4708602 4709081 R PFAM: regulatory protein, MarR; KEGG: cya:CYA_1758 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(4708602..4709081) Clostridium beijerinckii NCIMB 8052 5295254 YP_001311165.1 CDS Cbei_4099 NC_009617.1 4709047 4710639 R TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: chy:CHY_1864 drug resistance transporter EmrB/QacA family; EmrB/QacA family drug resistance transporter complement(4709047..4710639) Clostridium beijerinckii NCIMB 8052 5295255 YP_001311166.1 CDS Cbei_4100 NC_009617.1 4710652 4711305 R KEGG: mta:Moth_2323 secretion protein HlyD; secretion protein HlyD complement(4710652..4711305) Clostridium beijerinckii NCIMB 8052 5295256 YP_001311167.1 CDS Cbei_4101 NC_009617.1 4711325 4712308 R PFAM: secretion protein HlyD family protein; KEGG: mta:Moth_2322 secretion protein HlyD; secretion protein HlyD family protein complement(4711325..4712308) Clostridium beijerinckii NCIMB 8052 5295257 YP_001311168.1 CDS Cbei_4102 NC_009617.1 4712576 4713982 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cac:CAC2434 membrane associatehistidine kinase with HAMP domain; integral membrane sensor signal transduction histidine kinase complement(4712576..4713982) Clostridium beijerinckii NCIMB 8052 5295258 YP_001311169.1 CDS Cbei_4103 NC_009617.1 4713969 4714655 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cac:CAC2435 response regulator (CheY-like domain and HTH-type DNA-binding domain); two component transcriptional regulator complement(4713969..4714655) Clostridium beijerinckii NCIMB 8052 5295259 YP_001311170.1 CDS Cbei_4104 NC_009617.1 4714802 4716193 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: cac:CAC0747 secreted protein containing uncharacterized conserved protein of ErfK family; ErfK/YbiS/YcfS/YnhG family protein complement(4714802..4716193) Clostridium beijerinckii NCIMB 8052 5295260 YP_001311171.1 CDS Cbei_4105 NC_009617.1 4716312 4718045 R PFAM: amine oxidase; KEGG: ter:Tery_1366 amine oxidase; amine oxidase complement(4716312..4718045) Clostridium beijerinckii NCIMB 8052 5295261 YP_001311172.1 CDS Cbei_4106 NC_009617.1 4718178 4719563 R KEGG: cac:CAC0747 secreted protein containing uncharacterized conserved protein of ErfK family; ErfK family protein complement(4718178..4719563) Clostridium beijerinckii NCIMB 8052 5295262 YP_001311173.1 CDS Cbei_4107 NC_009617.1 4719764 4720237 R PFAM: iron dependent repressor; KEGG: cth:Cthe_1402 iron (metal) dependent repressor, DtxR family; iron dependent repressor complement(4719764..4720237) Clostridium beijerinckii NCIMB 8052 5295263 YP_001311174.1 CDS Cbei_4108 NC_009617.1 4720583 4720933 R PFAM: helix-turn-helix, HxlR type; KEGG: cac:CAC2568 predicted transcriptional regulator; HxlR family transcriptional regulator complement(4720583..4720933) Clostridium beijerinckii NCIMB 8052 5295264 YP_001311175.1 CDS Cbei_4109 NC_009617.1 4721061 4721369 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: cac:CAC2569 NimC/NimA family protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 4721061..4721369 Clostridium beijerinckii NCIMB 8052 5295265 YP_001311176.1 CDS Cbei_4110 NC_009617.1 4721470 4723173 R TIGRFAM: hydrogenase, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; iron hydrogenase, small subunit; hydrogenase large subunit domain protein; KEGG: cth:Cthe_0430 hydrogenase, Fe-only; hydrogenase, Fe-only complement(4721470..4723173) Clostridium beijerinckii NCIMB 8052 5295266 YP_001311177.1 CDS Cbei_4111 NC_009617.1 4723253 4725133 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: cth:Cthe_0429 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) complement(4723253..4725133) Clostridium beijerinckii NCIMB 8052 5295267 YP_001311178.1 CDS Cbei_4112 NC_009617.1 4725123 4725617 R PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; KEGG: cth:Cthe_0428 NADH dehydrogenase (ubiquinone), 24 kDa subunit; NADH dehydrogenase (ubiquinone), 24 kDa subunit complement(4725123..4725617) Clostridium beijerinckii NCIMB 8052 5295268 YP_001311179.1 CDS alr NC_009617.1 4726029 4727192 D converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 4726029..4727192 Clostridium beijerinckii NCIMB 8052 5295269 YP_001311180.1 CDS Cbei_4114 NC_009617.1 4727633 4729438 R PFAM: GTP-binding protein, HSR1-related; KEGG: tte:TTE1899 predicted GTPase (dynamin-related); HSR1-like GTP-binding protein complement(4727633..4729438) Clostridium beijerinckii NCIMB 8052 5295270 YP_001311181.1 CDS Cbei_4115 NC_009617.1 4729444 4731216 R KEGG: tte:TTE1899 predicted GTPase (dynamin-related); hypothetical protein complement(4729444..4731216) Clostridium beijerinckii NCIMB 8052 5295271 YP_001311182.1 CDS Cbei_4116 NC_009617.1 4731223 4731912 R KEGG: ehi:3.t00030 hypothetical protein Pfam: Snf7 Apolipoprotein DUF19 Myosin_tail_1 Filament PFEMP FH2 DHC_N1 EzrA Laminin_I DUF1664 TLD PROSITE: ASP_RICH GLU_RICH LYS_RICH; hypothetical protein complement(4731223..4731912) Clostridium beijerinckii NCIMB 8052 5295272 YP_001311183.1 CDS Cbei_4117 NC_009617.1 4731921 4734434 R KEGG: tte:TTE1899 predicted GTPase (dynamin-related); hypothetical protein complement(4731921..4734434) Clostridium beijerinckii NCIMB 8052 5295273 YP_001311184.1 CDS Cbei_4118 NC_009617.1 4734977 4735708 R PFAM: aminotransferase, class IV; KEGG: cpr:CPR_1095 branched-chain amino acid aminotransferase; class IV aminotransferase complement(4734977..4735708) Clostridium beijerinckii NCIMB 8052 5295274 YP_001311185.1 CDS Cbei_4119 NC_009617.1 4735708 4737063 R TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: cpr:CPR_1094 para-aminobenzoate synthase, component I; para-aminobenzoate synthase subunit I complement(4735708..4737063) Clostridium beijerinckii NCIMB 8052 5295275 YP_001311186.1 CDS Cbei_4120 NC_009617.1 4737050 4737640 R TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: cpr:CPR_1093 para-aminobenzoate synthase glutamine amidotransferase, component II; glutamine amidotransferase of anthranilate synthase complement(4737050..4737640) Clostridium beijerinckii NCIMB 8052 5295276 YP_001311187.1 CDS Cbei_4121 NC_009617.1 4737953 4739134 R PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: cpr:CPR_1123 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase complement(4737953..4739134) Clostridium beijerinckii NCIMB 8052 5295277 YP_001311188.1 CDS Cbei_4122 NC_009617.1 4739363 4740550 R KEGG: cno:NT01CX_0690 hypothetical protein; hypothetical protein complement(4739363..4740550) Clostridium beijerinckii NCIMB 8052 5295278 YP_001311189.1 CDS Cbei_4123 NC_009617.1 4740893 4741342 R PFAM: heat shock protein Hsp20; KEGG: ctc:CTC02469 heat shock protein, molecular chaperone; heat shock protein Hsp20 complement(4740893..4741342) Clostridium beijerinckii NCIMB 8052 5295279 YP_001311190.1 CDS Cbei_4124 NC_009617.1 4741552 4743252 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cth:Cthe_1498 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(4741552..4743252) Clostridium beijerinckii NCIMB 8052 5295280 YP_001311191.1 CDS Cbei_4125 NC_009617.1 4743686 4745059 R TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BG12262 beta xyloside H+-symporter; sugar (glycoside-Pentoside-hexuronide) transporter complement(4743686..4745059) Clostridium beijerinckii NCIMB 8052 5295281 YP_001311192.1 CDS Cbei_4126 NC_009617.1 4745302 4746963 R PFAM: glycoside hydrolase, family 43; KEGG: cac:CAC3452 beta-xylosidase, family 43 glycosyl hydrolase; alpha-N-arabinofuranosidase complement(4745302..4746963) Clostridium beijerinckii NCIMB 8052 5295282 YP_001311193.1 CDS Cbei_4127 NC_009617.1 4747125 4748861 R PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: rpc:RPC_4380 dihydroxy-acid dehydratase; dihydroxy-acid dehydratase complement(4747125..4748861) Clostridium beijerinckii NCIMB 8052 5295283 YP_001311194.1 CDS Cbei_4128 NC_009617.1 4748927 4749814 R PFAM: dihydrodipicolinate synthetase; KEGG: chy:CHY_1320 dihydrodipicolinate synthase; dihydrodipicolinate synthetase complement(4748927..4749814) Clostridium beijerinckii NCIMB 8052 5295284 YP_001311195.1 CDS Cbei_4129 NC_009617.1 4749899 4750666 R PFAM: IclR family transcriptional regulator; Transcriptional regulator IclR-like; KEGG: bld:BLi04073 hypothetical protein; transcriptional regulator IclR-like protein complement(4749899..4750666) Clostridium beijerinckii NCIMB 8052 5295285 YP_001311196.1 CDS Cbei_4130 NC_009617.1 4750827 4752002 R PFAM: regulatory protein, MerR; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ctc:CTC01641 transcriptional regulatory protein; type 11 methyltransferase complement(4750827..4752002) Clostridium beijerinckii NCIMB 8052 5295286 YP_001311197.1 CDS Cbei_4131 NC_009617.1 4752177 4752998 D KEGG: ddi:DDBDRAFT_0185950 hypothetical protein; hypothetical protein 4752177..4752998 Clostridium beijerinckii NCIMB 8052 5295287 YP_001311198.1 CDS Cbei_4132 NC_009617.1 4753094 4754269 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: ctc:CTC01639 spore coat polysaccharide biosynthesis protein SpsC; DegT/DnrJ/EryC1/StrS aminotransferase complement(4753094..4754269) Clostridium beijerinckii NCIMB 8052 5295288 YP_001311199.1 CDS Cbei_4133 NC_009617.1 4754675 4756390 R PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: tte:TTE1253 predicted hydrolase of the metallo-beta-lactamase superfamily; beta-lactamase domain-containing protein complement(4754675..4756390) Clostridium beijerinckii NCIMB 8052 5295289 YP_001311200.1 CDS Cbei_4134 NC_009617.1 4756624 4757394 R KEGG: bat:BAS0215 hypothetical protein; hypothetical protein complement(4756624..4757394) Clostridium beijerinckii NCIMB 8052 5295290 YP_001311201.1 CDS Cbei_4135 NC_009617.1 4757423 4759396 R TIGRFAM: pullulanase, type I; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: cpe:CPE1552 pullulanase; pullulanase complement(4757423..4759396) Clostridium beijerinckii NCIMB 8052 5295291 YP_001311202.1 CDS Cbei_4136 NC_009617.1 4759496 4760839 R PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: cac:CAC2686 possible maltodextrin glucosidase; alpha amylase complement(4759496..4760839) Clostridium beijerinckii NCIMB 8052 5295292 YP_001311203.1 CDS Cbei_4137 NC_009617.1 4761099 4761572 D hypothetical protein 4761099..4761572 Clostridium beijerinckii NCIMB 8052 5295293 YP_001311204.1 CDS Cbei_4138 NC_009617.1 4761643 4762671 R PFAM: alpha/beta hydrolase fold; KEGG: cac:CAC2246 lysophospholipase L2 PLDB, hydrolase of alpha/beta superfamily; alpha/beta fold family hydrolase complement(4761643..4762671) Clostridium beijerinckii NCIMB 8052 5295294 YP_001311205.1 CDS Cbei_4139 NC_009617.1 4762971 4764038 R PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cac:CAC2620 HD-GYP hydrolase domain containing protein; metal dependent phosphohydrolase complement(4762971..4764038) Clostridium beijerinckii NCIMB 8052 5295295 YP_001311206.1 CDS Cbei_4140 NC_009617.1 4764378 4764536 R KEGG: cno:NT01CX_2018 hypothetical protein; hypothetical protein complement(4764378..4764536) Clostridium beijerinckii NCIMB 8052 5295296 YP_001311207.1 CDS Cbei_4141 NC_009617.1 4764654 4765001 R PFAM: arsenate reductase and related; KEGG: cac:CAC0417 similar to arsenate reductase; arsenate reductase-like protein complement(4764654..4765001) Clostridium beijerinckii NCIMB 8052 5295297 YP_001311208.1 CDS deoD NC_009617.1 4765404 4766117 R catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase complement(4765404..4766117) Clostridium beijerinckii NCIMB 8052 5295298 YP_001311209.1 CDS Cbei_4143 NC_009617.1 4766192 4766842 R catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase complement(4766192..4766842) Clostridium beijerinckii NCIMB 8052 5295299 YP_001311210.1 CDS Cbei_4144 NC_009617.1 4767040 4767924 R PFAM: inner-membrane translocator; KEGG: cth:Cthe_1581 inner-membrane translocator; inner-membrane translocator complement(4767040..4767924) Clostridium beijerinckii NCIMB 8052 5295300 YP_001311211.1 CDS Cbei_4145 NC_009617.1 4767914 4769041 R PFAM: inner-membrane translocator; KEGG: cth:Cthe_1580 inner-membrane translocator; inner-membrane translocator complement(4767914..4769041) Clostridium beijerinckii NCIMB 8052 5295301 YP_001311212.1 CDS Cbei_4146 NC_009617.1 4769016 4770566 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cth:Cthe_1579 ABC transporter protein; ABC transporter complement(4769016..4770566) Clostridium beijerinckii NCIMB 8052 5295302 YP_001311213.1 CDS Cbei_4147 NC_009617.1 4770763 4771821 R PFAM: basic membrane lipoprotein; KEGG: gka:GK1283 ABC transporter (lipoprotein); basic membrane lipoprotein complement(4770763..4771821) Clostridium beijerinckii NCIMB 8052 5295303 YP_001311214.1 CDS Cbei_4148 NC_009617.1 4772080 4773096 R PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: cno:NT01CX_1495 transcriptional regulator; alanine racemase complement(4772080..4773096) Clostridium beijerinckii NCIMB 8052 5295304 YP_001311215.1 CDS Cbei_4149 NC_009617.1 4773518 4774690 R PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase, class I and II; KEGG: cpr:CPR_0701 aspartate aminotransferase; class I and II aminotransferase complement(4773518..4774690) Clostridium beijerinckii NCIMB 8052 5295305 YP_001311216.1 CDS Cbei_4150 NC_009617.1 4774687 4775166 R PFAM: regulatory protein, AsnC/Lrp family; KEGG: cpr:CPR_0700 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(4774687..4775166) Clostridium beijerinckii NCIMB 8052 5295306 YP_001311217.1 CDS Cbei_4151 NC_009617.1 4775777 4775932 R KEGG: cno:NT01CX_0353 hypothetical protein; hypothetical protein complement(4775777..4775932) Clostridium beijerinckii NCIMB 8052 5295307 YP_001311218.1 CDS Cbei_4152 NC_009617.1 4776175 4778451 R PFAM: ATPase AAA, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: ATPase AAA; KEGG: cth:Cthe_1217 ATP-dependent Clp protease, ATP-binding subunit ClpA; ATPase complement(4776175..4778451) Clostridium beijerinckii NCIMB 8052 5295308 YP_001311219.1 CDS Cbei_4153 NC_009617.1 4778455 4778754 R PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: cth:Cthe_1216 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS complement(4778455..4778754) Clostridium beijerinckii NCIMB 8052 5295309 YP_001311220.1 CDS Cbei_4154 NC_009617.1 4778879 4780306 R PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: cno:NT01CX_0762 arginine/lysine/ornithine decarboxylases; Orn/Lys/Arg decarboxylase complement(4778879..4780306) Clostridium beijerinckii NCIMB 8052 5295310 YP_001311221.1 CDS Cbei_4155 NC_009617.1 4780786 4781805 R PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: dsy:DSY4242 hypothetical protein; threonine aldolase complement(4780786..4781805) Clostridium beijerinckii NCIMB 8052 5295311 YP_001311222.1 CDS Cbei_4156 NC_009617.1 4781820 4783064 R PFAM: peptidase M16 domain protein; KEGG: ctc:CTC01755 zinc protease; peptidase M16 domain-containing protein complement(4781820..4783064) Clostridium beijerinckii NCIMB 8052 5295312 YP_001311223.1 CDS Cbei_4157 NC_009617.1 4783430 4784791 R PFAM: Radical SAM domain protein; KEGG: cac:CAC2279 heme biosynthesis (nirJ-2) family protein; radical SAM domain-containing protein complement(4783430..4784791) Clostridium beijerinckii NCIMB 8052 5295313 YP_001311224.1 CDS Cbei_4158 NC_009617.1 4785200 4785463 R PFAM: phosphotransferase system PTS, EIIB protein; KEGG: eca:ECA4388 PTS system, IIABC component; PTS system transporter subunit IIB complement(4785200..4785463) Clostridium beijerinckii NCIMB 8052 5295314 YP_001311225.1 CDS Cbei_4159 NC_009617.1 4785663 4788131 R PFAM: LuxR family transcriptional regulator; KEGG: swo:Swol_1080 ATP-dependent transcriptional regulator-like protein; LuxR family transcriptional regulator complement(4785663..4788131) Clostridium beijerinckii NCIMB 8052 5295315 YP_001311226.1 CDS Cbei_4160 NC_009617.1 4788381 4790315 R molecular chaperone; heat shock protein 90 complement(4788381..4790315) Clostridium beijerinckii NCIMB 8052 5295316 YP_001311227.1 CDS Cbei_4161 NC_009617.1 4790529 4792241 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01211 methyl-accepting chemotaxis protein TlpA; methyl-accepting chemotaxis sensory transducer complement(4790529..4792241) Clostridium beijerinckii NCIMB 8052 5295317 YP_001311228.1 CDS Cbei_4162 NC_009617.1 4792458 4793222 D PFAM: regulatory protein, MerR; TipAS antibiotic-recognition domain protein; KEGG: dsy:DSY4240 hypothetical protein; MerR family transcriptional regulator 4792458..4793222 Clostridium beijerinckii NCIMB 8052 5295318 YP_001311229.1 CDS Cbei_4163 NC_009617.1 4793388 4794062 R TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: dsy:DSY1176 hypothetical protein; metal dependent phosphohydrolase complement(4793388..4794062) Clostridium beijerinckii NCIMB 8052 5295319 YP_001311230.1 CDS Cbei_4164 NC_009617.1 4794154 4794537 R KEGG: cac:CAC3264 uncharacterized conserved protein, YTFJ B.subtilis ortholog; hypothetical protein complement(4794154..4794537) Clostridium beijerinckii NCIMB 8052 5295320 YP_001311231.1 CDS Cbei_4165 NC_009617.1 4795061 4796830 R TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase, HD sub domain; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; metal-dependent phosphohydrolase, HD region; KEGG: cpf:CPF_1164 sensory box-containing diguanylate cyclase; diguanylate cyclase and metal dependent phosphohydrolase complement(4795061..4796830) Clostridium beijerinckii NCIMB 8052 5295321 YP_001311232.1 CDS Cbei_4166 NC_009617.1 4796970 4799003 R PFAM: protein of unknown function DUF214; KEGG: cpe:CPE0851 probable ABC transporter; hypothetical protein complement(4796970..4799003) Clostridium beijerinckii NCIMB 8052 5295322 YP_001311233.1 CDS Cbei_4167 NC_009617.1 4798993 4799760 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_0841 ABC transporter ATP-binding protein; ABC transporter complement(4798993..4799760) Clostridium beijerinckii NCIMB 8052 5295323 YP_001311234.1 CDS Cbei_4168 NC_009617.1 4800101 4801114 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cpf:CPF_0837 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase complement(4800101..4801114) Clostridium beijerinckii NCIMB 8052 5295324 YP_001311235.1 CDS Cbei_4169 NC_009617.1 4801111 4801782 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cpf:CPF_0836 DNA-binding response regulator; two component transcriptional regulator complement(4801111..4801782) Clostridium beijerinckii NCIMB 8052 5295325 YP_001311236.1 CDS Cbei_4170 NC_009617.1 4802151 4802783 R TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsy:DSY4275 hypothetical protein; polar amino acid ABC transporter inner membrane subunit complement(4802151..4802783) Clostridium beijerinckii NCIMB 8052 5295326 YP_001311237.1 CDS Cbei_4171 NC_009617.1 4802786 4803514 R TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsy:DSY4276 hypothetical protein; polar amino acid ABC transporter inner membrane subunit complement(4802786..4803514) Clostridium beijerinckii NCIMB 8052 5295327 YP_001311238.1 CDS Cbei_4172 NC_009617.1 4803514 4804326 R PFAM: extracellular solute-binding protein, family 3; KEGG: dsy:DSY4277 hypothetical protein; extracellular solute-binding protein complement(4803514..4804326) Clostridium beijerinckii NCIMB 8052 5295328 YP_001311239.1 CDS Cbei_4173 NC_009617.1 4804409 4805131 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY4278 hypothetical protein; ABC transporter complement(4804409..4805131) Clostridium beijerinckii NCIMB 8052 5295329 YP_001311240.1 CDS Cbei_4174 NC_009617.1 4805413 4806297 R PFAM: response regulator receiver; YcbB domain; KEGG: tte:TTE1203 CheY-like receiver domains; response regulator receiver complement(4805413..4806297) Clostridium beijerinckii NCIMB 8052 5295330 YP_001311241.1 CDS Cbei_4175 NC_009617.1 4806325 4807587 R PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: tte:TTE1202 Sensory transduction histidine kinases; signal transduction histidine kinase regulating citrate/malate metabolism complement(4806325..4807587) Clostridium beijerinckii NCIMB 8052 5295331 YP_001311242.1 CDS Cbei_4176 NC_009617.1 4807694 4808014 R PFAM: branched-chain amino acid transport; KEGG: bca:BCE_4093 hypothetical protein; branched-chain amino acid transporter complement(4807694..4808014) Clostridium beijerinckii NCIMB 8052 5295332 YP_001311243.1 CDS Cbei_4177 NC_009617.1 4808011 4808745 R PFAM: AzlC family protein; KEGG: bca:BCE_4092 AzlC family protein; AzlC family protein complement(4808011..4808745) Clostridium beijerinckii NCIMB 8052 5295333 YP_001311244.1 CDS Cbei_4178 NC_009617.1 4808866 4809417 D PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; KEGG: ctc:CTC01439 transcriptional regulatory protein; XRE family transcriptional regulator 4808866..4809417 Clostridium beijerinckii NCIMB 8052 5295334 YP_001311245.1 CDS Cbei_4179 NC_009617.1 4809427 4810341 R PFAM: Auxin Efflux Carrier; KEGG: smu:SMU.909 permease; auxin efflux carrier complement(4809427..4810341) Clostridium beijerinckii NCIMB 8052 5295335 YP_001311246.1 CDS Cbei_4180 NC_009617.1 4810589 4811656 R PFAM: CheB methylesterase; response regulator receiver; KEGG: cth:Cthe_2281 response regulator receiver modulated CheB methylesterase; response regulator receiver modulated CheB methylesterase complement(4810589..4811656) Clostridium beijerinckii NCIMB 8052 5295336 YP_001311247.1 CDS Cbei_4181 NC_009617.1 4811653 4812465 R PFAM: MCP methyltransferase, CheR-type; KEGG: cth:Cthe_2282 MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase complement(4811653..4812465) Clostridium beijerinckii NCIMB 8052 5295337 YP_001311248.1 CDS Cbei_4182 NC_009617.1 4812626 4817047 R PFAM: chemotaxis sensory transducer; KEGG: cth:Cthe_2819 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(4812626..4817047) Clostridium beijerinckii NCIMB 8052 5295338 YP_001311249.1 CDS Cbei_4183 NC_009617.1 4817081 4819237 R PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; P2 response regulator binding domain protein; KEGG: cth:Cthe_2284 chemotaxis protein CheAs; chemotaxis protein CheA complement(4817081..4819237) Clostridium beijerinckii NCIMB 8052 5295339 YP_001311250.1 CDS Cbei_4184 NC_009617.1 4819248 4819694 R PFAM: CheW domain protein; KEGG: cth:Cthe_2285 CheW protein; CheW protein complement(4819248..4819694) Clostridium beijerinckii NCIMB 8052 5295340 YP_001311251.1 CDS Cbei_4185 NC_009617.1 4820335 4821381 R TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cac:CAC3650 HD-GYP domain containing protein; metal dependent phosphohydrolase complement(4820335..4821381) Clostridium beijerinckii NCIMB 8052 5295341 YP_001311252.1 CDS Cbei_4186 NC_009617.1 4821648 4823336 R TIGRFAM: small GTP-binding protein; sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor, GTP-binding; KEGG: ftn:FTN_0927 sulfate adenylate transferase, subunit 1; sulfate adenylyltransferase, large subunit complement(4821648..4823336) Clostridium beijerinckii NCIMB 8052 5295342 YP_001311253.1 CDS Cbei_4187 NC_009617.1 4823338 4824237 R with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 complement(4823338..4824237) Clostridium beijerinckii NCIMB 8052 5295343 YP_001311254.1 CDS Cbei_4188 NC_009617.1 4824310 4824627 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cac:CAC0105 ferredoxin; 4Fe-4S ferredoxin complement(4824310..4824627) Clostridium beijerinckii NCIMB 8052 5295344 YP_001311255.1 CDS Cbei_4189 NC_009617.1 4824611 4826317 R catalyzes the reduction of adenosine 5'-phosphosulfate to AMP and sulfite; adenylylsulfate reductase subunit alpha complement(4824611..4826317) Clostridium beijerinckii NCIMB 8052 5295345 YP_001311256.1 CDS Cbei_4190 NC_009617.1 4826614 4827678 R TIGRFAM: sulfate ABC transporter ATPase subunit; PFAM: ABC transporter; Transport-associated OB domain protein; SMART: ATPase AAA; KEGG: syn:slr1455 ABC-type sulfate transport system ATP-binding protein; sulfate ABC transporter ATPase complement(4826614..4827678) Clostridium beijerinckii NCIMB 8052 5295346 YP_001311257.1 CDS Cbei_4191 NC_009617.1 4827684 4828499 R TIGRFAM: sulfate ABC transporter inner membrane subunit; sulfate ABC transporter inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nmu:Nmul_A0504 sulfate ABC transporter permease CysW; sulfate ABC transporter permease complement(4827684..4828499) Clostridium beijerinckii NCIMB 8052 5295347 YP_001311258.1 CDS Cbei_4192 NC_009617.1 4828527 4829351 R TIGRFAM: sulfate ABC transporter inner membrane subunit; sulfate ABC transporter inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bce:BC1092 sulfate transport system permease cysT; sulfate ABC transporter permease complement(4828527..4829351) Clostridium beijerinckii NCIMB 8052 5295348 YP_001311259.1 CDS Cbei_4193 NC_009617.1 4829551 4830579 R TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: bca:BCE_1196 sulfate ABC transporter sulfate/thiosulfate-binding protein; sulfate ABC transporter substrate-binding protein complement(4829551..4830579) Clostridium beijerinckii NCIMB 8052 5295349 YP_001311260.1 CDS Cbei_4194 NC_009617.1 4831135 4832181 R TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: bca:BCE_1196 sulfate ABC transporter sulfate/thiosulfate-binding protein; sulfate ABC transporter substrate-binding protein complement(4831135..4832181) Clostridium beijerinckii NCIMB 8052 5295350 YP_001311261.1 CDS Cbei_4195 NC_009617.1 4832641 4832805 R hypothetical protein complement(4832641..4832805) Clostridium beijerinckii NCIMB 8052 5295351 YP_001311262.1 CDS Cbei_4196 NC_009617.1 4832869 4835019 R TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: cth:Cthe_0618 ferrous iron transport protein B; ferrous iron transport protein B complement(4832869..4835019) Clostridium beijerinckii NCIMB 8052 5295352 YP_001311263.1 CDS Cbei_4197 NC_009617.1 4835094 4835315 R PFAM: FeoA family protein; KEGG: cth:Cthe_0619 FeoA; FeoA family protein complement(4835094..4835315) Clostridium beijerinckii NCIMB 8052 5295353 YP_001311264.1 CDS Cbei_4198 NC_009617.1 4835329 4835538 R PFAM: FeoA family protein; KEGG: mac:MA3478 hypothetical protein; FeoA family protein complement(4835329..4835538) Clostridium beijerinckii NCIMB 8052 5295354 YP_001311265.1 CDS Cbei_4199 NC_009617.1 4836342 4837550 R Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase complement(4836342..4837550) Clostridium beijerinckii NCIMB 8052 5295355 YP_001311266.1 CDS Cbei_4200 NC_009617.1 4837873 4838667 R TIGRFAM: phage replisome organizer, KEGG: sac:SACOL0341 hypothetical protein; phage replisome organizer complement(4837873..4838667) Clostridium beijerinckii NCIMB 8052 5295356 YP_001311267.1 CDS Cbei_4201 NC_009617.1 4839220 4839510 R hypothetical protein complement(4839220..4839510) Clostridium beijerinckii NCIMB 8052 5295357 YP_001311268.1 CDS Cbei_4202 NC_009617.1 4839679 4840596 R PFAM: Abortive infection protein; KEGG: tte:TTE0417 predicted metal-dependent membrane protease; abortive infection protein complement(4839679..4840596) Clostridium beijerinckii NCIMB 8052 5295358 YP_001311269.1 CDS Cbei_4203 NC_009617.1 4841316 4842788 R TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: syn:sll1027 NADH-dependent glutamate synthase small subunit; glutamate synthase NADH/NADPH small subunit complement(4841316..4842788) Clostridium beijerinckii NCIMB 8052 5295359 YP_001311270.1 CDS Cbei_4204 NC_009617.1 4842802 4847412 R PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: bha:BH1728 glutamate synthase (large subunit); glutamate synthase complement(4842802..4847412) Clostridium beijerinckii NCIMB 8052 5295360 YP_001311271.1 CDS Cbei_4205 NC_009617.1 4847552 4848112 R PFAM: ANTAR domain protein; KEGG: mta:Moth_1295 response regulator receiver (CheY-like) and ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein complement(4847552..4848112) Clostridium beijerinckii NCIMB 8052 5295361 YP_001311272.1 CDS Cbei_4206 NC_009617.1 4848154 4849485 R TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; KEGG: chy:CHY_0704 glutamine synthetase; glutamine synthetase, type I complement(4848154..4849485) Clostridium beijerinckii NCIMB 8052 5295362 YP_001311273.1 CDS Cbei_4207 NC_009617.1 4851118 4852431 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive; aspartate kinase 4851118..4852431 Clostridium beijerinckii NCIMB 8052 5295363 YP_001311274.1 CDS Cbei_4208 NC_009617.1 4852756 4853409 R PFAM: SNARE associated Golgi protein; KEGG: cpf:CPF_1159 DedA protein; hypothetical protein complement(4852756..4853409) Clostridium beijerinckii NCIMB 8052 5295364 YP_001311275.1 CDS Cbei_4209 NC_009617.1 4853572 4856460 R PFAM: von Willebrand factor, type A; KEGG: cpr:CPR_2263 von Willebrand factor type A domain protein; von Willebrand factor, type A complement(4853572..4856460) Clostridium beijerinckii NCIMB 8052 5295365 YP_001311276.1 CDS Cbei_4210 NC_009617.1 4856522 4857091 R KEGG: cpr:CPR_2264 prepilin peptidase-dependent; hypothetical protein complement(4856522..4857091) Clostridium beijerinckii NCIMB 8052 5295366 YP_001311277.1 CDS Cbei_4211 NC_009617.1 4857107 4859587 R KEGG: cpr:CPR_2265 hypothetical protein; hypothetical protein complement(4857107..4859587) Clostridium beijerinckii NCIMB 8052 5295367 YP_001311278.1 CDS Cbei_4212 NC_009617.1 4859635 4860591 R hypothetical protein complement(4859635..4860591) Clostridium beijerinckii NCIMB 8052 5295368 YP_001311279.1 CDS Cbei_4213 NC_009617.1 4860638 4861972 R KEGG: cpe:CPE2281 type IV pilus assembly protein PilO; type IV pilus assembly protein PilO complement(4860638..4861972) Clostridium beijerinckii NCIMB 8052 5295369 YP_001311280.1 CDS Cbei_4214 NC_009617.1 4861974 4862531 R PFAM: Fimbrial assembly family protein; KEGG: cno:NT01CX_1597 fimbrial assembly protein (PilN) superfamily; fimbrial assembly family protein complement(4861974..4862531) Clostridium beijerinckii NCIMB 8052 5295370 YP_001311281.1 CDS Cbei_4215 NC_009617.1 4862548 4863726 R TIGRFAM: type IV pilus assembly protein PilM; KEGG: cpe:CPE2283 probable fimbrial assembly protein; type IV pilus assembly protein PilM complement(4862548..4863726) Clostridium beijerinckii NCIMB 8052 5295371 YP_001311282.1 CDS Cbei_4216 NC_009617.1 4863958 4864389 R KEGG: cpf:CPF_2567 type IV pilin; type IV pilin complement(4863958..4864389) Clostridium beijerinckii NCIMB 8052 5295372 YP_001311283.1 CDS Cbei_4217 NC_009617.1 4864466 4865668 R PFAM: type II secretion system protein; KEGG: cpe:CPE2285 probable pilin biogenesis protein; type II secretion system protein complement(4864466..4865668) Clostridium beijerinckii NCIMB 8052 5295373 YP_001311284.1 CDS Cbei_4218 NC_009617.1 4865772 4867466 R PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: ATPase AAA; KEGG: cpf:CPF_2570 secretion system protein E; type II secretion system protein E complement(4865772..4867466) Clostridium beijerinckii NCIMB 8052 5295374 YP_001311285.1 CDS Cbei_4219 NC_009617.1 4867581 4868333 R PFAM: peptidase A24A, prepilin type IV; peptidase A24A domain protein; KEGG: cpf:CPF_2571 type IV leader peptidase family protein; peptidase A24A domain-containing protein complement(4867581..4868333) Clostridium beijerinckii NCIMB 8052 5295375 YP_001311286.1 CDS Cbei_4220 NC_009617.1 4869514 4869798 R hypothetical protein complement(4869514..4869798) Clostridium beijerinckii NCIMB 8052 5295376 YP_001311287.1 CDS Cbei_4221 NC_009617.1 4870256 4870708 R PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_0126 pneumococcal surface protein A; cell wall binding repeat-containing protein complement(4870256..4870708) Clostridium beijerinckii NCIMB 8052 5295377 YP_001311288.1 CDS Cbei_4222 NC_009617.1 4872246 4872983 R PFAM: protein of unknown function DUF28; KEGG: cpr:CPR_1922 conserved hypothetical protein TIGR01033; hypothetical protein complement(4872246..4872983) Clostridium beijerinckii NCIMB 8052 5295378 YP_001311289.1 CDS Cbei_4223 NC_009617.1 4873362 4874009 R PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: cpe:CPE1955 hypothetical protein; hypothetical protein complement(4873362..4874009) Clostridium beijerinckii NCIMB 8052 5295379 YP_001311290.1 CDS Cbei_4224 NC_009617.1 4874388 4875830 R PFAM: GntR family transcriptional regulator; aminotransferase, class I and II; KEGG: cpr:CPR_1924 transcriptional regulator, GntR family/aminotransferase; GntR family transcriptional regulator complement(4874388..4875830) Clostridium beijerinckii NCIMB 8052 5295380 YP_001311291.1 CDS Cbei_4225 NC_009617.1 4875858 4876778 R PFAM: DNA polymerase, beta domain protein region; KEGG: cno:NT01CX_1815 hypothetical protein; DNA polymerase subunit beta complement(4875858..4876778) Clostridium beijerinckii NCIMB 8052 5295381 YP_001311292.1 CDS Cbei_4226 NC_009617.1 4877288 4877830 R KEGG: cpf:CPF_2214 hypothetical protein; hypothetical protein complement(4877288..4877830) Clostridium beijerinckii NCIMB 8052 5295382 YP_001311293.1 CDS Cbei_4227 NC_009617.1 4877912 4879702 R PFAM: GTP-binding protein, HSR1-related; KEGG: cpr:CPR_1927 GTP binding protein; HSR1-like GTP-binding protein complement(4877912..4879702) Clostridium beijerinckii NCIMB 8052 5295383 YP_001311294.1 CDS Cbei_4228 NC_009617.1 4880360 4880881 D TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: cpf:CPF_2216 hypoxanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 4880360..4880881 Clostridium beijerinckii NCIMB 8052 5295384 YP_001311295.1 CDS Cbei_4229 NC_009617.1 4880961 4881632 R TIGRFAM: Sporulation protein YunB; KEGG: cpr:CPR_1929 sporulation protein YunB; sporulation protein YunB complement(4880961..4881632) Clostridium beijerinckii NCIMB 8052 5295385 YP_001311296.1 CDS Cbei_4230 NC_009617.1 4881739 4884213 D TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; KEGG: cpf:CPF_2218 penicillin-binding protein, 1A family; 1A family penicillin-binding protein 4881739..4884213 Clostridium beijerinckii NCIMB 8052 5295386 YP_001311297.1 CDS Cbei_4231 NC_009617.1 4884306 4885166 R hypothetical protein complement(4884306..4885166) Clostridium beijerinckii NCIMB 8052 5295387 YP_001311298.1 CDS Cbei_4232 NC_009617.1 4885530 4885937 R PFAM: nucleoside diphosphate kinase; KEGG: cno:NT01CX_0238 nucleoside diphosphate kinase (NDK) (NDP kinase)(nucleoside-2-P kinase); nucleoside-diphosphate kinase complement(4885530..4885937) Clostridium beijerinckii NCIMB 8052 5295388 YP_001311299.1 CDS Cbei_4233 NC_009617.1 4886375 4886647 D PFAM: acylphosphatase; KEGG: bld:BLi00788 similar to proteins; RBL05910; acylphosphatase 4886375..4886647 Clostridium beijerinckii NCIMB 8052 5295389 YP_001311300.1 CDS Cbei_4234 NC_009617.1 4886720 4887454 R PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cno:NT01CX_1282 PHP family protein; hydrolase complement(4886720..4887454) Clostridium beijerinckii NCIMB 8052 5295390 YP_001311301.1 CDS Cbei_4235 NC_009617.1 4887985 4890186 R KEGG: ctc:CTC00839 cellulose synthase subunit domain; cellulose synthase complement(4887985..4890186) Clostridium beijerinckii NCIMB 8052 5295391 YP_001311302.1 CDS Cbei_4236 NC_009617.1 4890198 4891451 R PFAM: glycosyl transferase, family 2; KEGG: ctc:CTC00838 N-acetylglucosaminyltransferase; glycosyl transferase family protein complement(4890198..4891451) Clostridium beijerinckii NCIMB 8052 5295392 YP_001311303.1 CDS Cbei_4237 NC_009617.1 4891456 4892736 R KEGG: lmf:LMOf2365_0557 hypothetical protein; hypothetical protein complement(4891456..4892736) Clostridium beijerinckii NCIMB 8052 5295393 YP_001311304.1 CDS Cbei_4238 NC_009617.1 4892720 4893574 R PFAM: GGDEF domain containing protein; KEGG: lmf:LMOf2365_0560 hypothetical protein; diguanylate cyclase complement(4892720..4893574) Clostridium beijerinckii NCIMB 8052 5295394 YP_001311305.1 CDS Cbei_4239 NC_009617.1 4894070 4895548 R KEGG: lin:lin0531 transmembrane protein; transmembrane protein complement(4894070..4895548) Clostridium beijerinckii NCIMB 8052 5295395 YP_001311306.1 CDS Cbei_4240 NC_009617.1 4895743 4896516 D TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: cac:CAC0522 predicted hydrolase of the HAD superfamily; cof family hydrolase 4895743..4896516 Clostridium beijerinckii NCIMB 8052 5295396 YP_001311307.1 CDS Cbei_4241 NC_009617.1 4897097 4898143 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(4897097..4898143) Clostridium beijerinckii NCIMB 8052 5295397 YP_001311308.1 CDS Cbei_4242 NC_009617.1 4898982 4899413 D KEGG: cpf:CPF_2310 hypothetical protein; hypothetical protein 4898982..4899413 Clostridium beijerinckii NCIMB 8052 5295398 YP_001311309.1 CDS Cbei_4243 NC_009617.1 4899435 4902071 R TIGRFAM: ATPase P; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: cpr:CPR_2026 cation-transporting ATPase pacl; ATPase P complement(4899435..4902071) Clostridium beijerinckii NCIMB 8052 5295399 YP_001311310.1 CDS Cbei_4244 NC_009617.1 4902312 4902956 R PFAM: cell wall binding repeat-containing protein; KEGG: cpr:CPR_0150 hypothetical protein; cell wall binding repeat-containing protein complement(4902312..4902956) Clostridium beijerinckii NCIMB 8052 5295400 YP_001311311.1 CDS Cbei_4245 NC_009617.1 4903266 4904912 R catalyzes the hydrolysis of pyrophosphate to phosphate; manganese-dependent inorganic pyrophosphatase complement(4903266..4904912) Clostridium beijerinckii NCIMB 8052 5295401 YP_001311312.1 CDS flgG NC_009617.1 4905244 4906011 R makes up the distal portion of the flagellar basal body rod; the Clostridia have 2 adjacent copies of the FlgG gene; flagellar basal body rod protein FlgG complement(4905244..4906011) Clostridium beijerinckii NCIMB 8052 5295402 YP_001311313.1 CDS flgG NC_009617.1 4906099 4906869 R makes up the distal portion of the flagellar basal body rod; the Clostridia have two adjacent copies of the FlgG gene; flagellar basal body rod protein FlgG complement(4906099..4906869) Clostridium beijerinckii NCIMB 8052 5295403 YP_001311314.1 CDS Cbei_4248 NC_009617.1 4907065 4907685 R KEGG: cno:NT01CX_1924 hypothetical protein; hypothetical protein complement(4907065..4907685) Clostridium beijerinckii NCIMB 8052 5295404 YP_001311315.1 CDS Cbei_4249 NC_009617.1 4907965 4908693 R TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: cac:CAC2143 sigma factor of SigD/WhiG family; RNA polymerase sigma 28 subunit FliA/WhiG complement(4907965..4908693) Clostridium beijerinckii NCIMB 8052 5295405 YP_001311316.1 CDS Cbei_4250 NC_009617.1 4908746 4909387 R PFAM: type IV pilus assembly PilZ; KEGG: cac:CAC2144 uncharacterized protein, YPFA B.subtilis ortholog; type IV pilus assembly PilZ complement(4908746..4909387) Clostridium beijerinckii NCIMB 8052 5295406 YP_001311317.1 CDS Cbei_4251 NC_009617.1 4909400 4910260 R PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: cno:NT01CX_1921 ATPases involved in chromosome partitioning, MinD family; cobyrinic acid a,c-diamide synthase complement(4909400..4910260) Clostridium beijerinckii NCIMB 8052 5295407 YP_001311318.1 CDS flhF NC_009617.1 4910254 4911594 R positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF complement(4910254..4911594) Clostridium beijerinckii NCIMB 8052 5295408 YP_001311319.1 CDS flhA NC_009617.1 4911595 4913661 R membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA complement(4911595..4913661) Clostridium beijerinckii NCIMB 8052 5295409 YP_001311320.1 CDS Cbei_4254 NC_009617.1 4913794 4915635 R FlhB is a membrane protein responsible for substrate specificity in switching from rod/hook-type export to filament-type export; FliR is required for export of flagellar proteins, although a specific role has not yet been determined; bifunctional flagellar biosynthesis protein FliR/FlhB complement(4913794..4915635) Clostridium beijerinckii NCIMB 8052 5295410 YP_001311321.1 CDS Cbei_4255 NC_009617.1 4915649 4915918 R PFAM: export protein FliQ, family 3; KEGG: cac:CAC2149 flagellar biosynthesis protein FliQ; export protein FliQ complement(4915649..4915918) Clostridium beijerinckii NCIMB 8052 5295411 YP_001311322.1 CDS Cbei_4256 NC_009617.1 4915930 4916709 R TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; KEGG: cno:NT01CX_1916 flagellar biosynthetic protein FliP; flagellar biosynthetic protein FliP complement(4915930..4916709) Clostridium beijerinckii NCIMB 8052 5295412 YP_001311323.1 CDS Cbei_4257 NC_009617.1 4916699 4917097 R KEGG: ctc:CTC01663 flagellar formation protein; flagellar formation protein complement(4916699..4917097) Clostridium beijerinckii NCIMB 8052 5295413 YP_001311324.1 CDS Cbei_4258 NC_009617.1 4917107 4917592 R PFAM: flagellar basal body-associated protein FliL; KEGG: cac:CAC2152 flagellar protein FliL; flagellar basal body-associated protein FliL complement(4917107..4917592) Clostridium beijerinckii NCIMB 8052 5295414 YP_001311325.1 CDS Cbei_4259 NC_009617.1 4917672 4917863 R PFAM: flagellar FlbD family protein; KEGG: cno:NT01CX_1911 flagellar protein FlbD -related protein; flagellar FlbD family protein complement(4917672..4917863) Clostridium beijerinckii NCIMB 8052 5295415 YP_001311326.1 CDS Cbei_4260 NC_009617.1 4918115 4919206 R PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: ctc:CTC01667 flagellar hook protein flgE; hypothetical protein complement(4918115..4919206) Clostridium beijerinckii NCIMB 8052 5295416 YP_001311327.1 CDS Cbei_4261 NC_009617.1 4919291 4919689 R TIGRFAM: flagellar operon protein; KEGG: cno:NT01CX_1909 hypothetical protein; flagellar operon protein complement(4919291..4919689) Clostridium beijerinckii NCIMB 8052 5295417 YP_001311328.1 CDS Cbei_4262 NC_009617.1 4919690 4920709 R PFAM: flagellar hook capping protein; KEGG: cno:NT01CX_1908 flagellar hook assembly protein FlgD; flagellar hook capping protein complement(4919690..4920709) Clostridium beijerinckii NCIMB 8052 5295418 YP_001311329.1 CDS Cbei_4263 NC_009617.1 4920721 4922067 R PFAM: flagellar hook-length control protein; KEGG: cac:CAC2157 flagellar hook-length control protein fliK; flagellar hook-length control protein complement(4920721..4922067) Clostridium beijerinckii NCIMB 8052 5295419 YP_001311330.1 CDS Cbei_4264 NC_009617.1 4922159 4922596 R TIGRFAM: flagellar export protein FliJ; KEGG: cno:NT01CX_1906 flagellar protein FliJ; flagellar export protein FliJ complement(4922159..4922596) Clostridium beijerinckii NCIMB 8052 5295420 YP_001311331.1 CDS Cbei_4265 NC_009617.1 4922732 4924048 R TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; SMART: ATPase AAA; KEGG: cno:NT01CX_1905 flagellum-specific ATP synthase; flagellar protein export ATPase FliI complement(4922732..4924048) Clostridium beijerinckii NCIMB 8052 5295421 YP_001311332.1 CDS Cbei_4266 NC_009617.1 4924191 4924967 R KEGG: cac:CAC2160 flagellar assembly protein FliH; flagellar biosynthesis/type III secretory pathway protein-like protein complement(4924191..4924967) Clostridium beijerinckii NCIMB 8052 5295422 YP_001311333.1 CDS fliG NC_009617.1 4924951 4925967 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G complement(4924951..4925967) Clostridium beijerinckii NCIMB 8052 5295423 YP_001311334.1 CDS fliF NC_009617.1 4925973 4927541 R the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein complement(4925973..4927541) Clostridium beijerinckii NCIMB 8052 5295424 YP_001311335.1 CDS Cbei_4269 NC_009617.1 4927563 4927880 R TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: cno:NT01CX_1901 flagellar hook-basal body complex protein (FliE); flagellar hook-basal body complex subunit FliE complement(4927563..4927880) Clostridium beijerinckii NCIMB 8052 5295425 YP_001311336.1 CDS flgC NC_009617.1 4927892 4928299 R with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC complement(4927892..4928299) Clostridium beijerinckii NCIMB 8052 5295426 YP_001311337.1 CDS flgB NC_009617.1 4928382 4928786 R with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgB complement(4928382..4928786) Clostridium beijerinckii NCIMB 8052 5295427 YP_001311338.1 CDS Cbei_4272 NC_009617.1 4929385 4930140 R PFAM: OmpA/MotB domain protein; KEGG: cac:CAC0305 chemotaxis motility protein B, gene motB; OmpA/MotB domain-containing protein complement(4929385..4930140) Clostridium beijerinckii NCIMB 8052 5295428 YP_001311339.1 CDS Cbei_4273 NC_009617.1 4930137 4930925 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: cac:CAC0304 chemotaxis motility protein A, gene motA; MotA/TolQ/ExbB proton channel complement(4930137..4930925) Clostridium beijerinckii NCIMB 8052 5295429 YP_001311340.1 CDS Cbei_4274 NC_009617.1 4931357 4932193 R PFAM: flagellin domain protein; KEGG: ctc:CTC01679 flagellin; flagellin domain-containing protein complement(4931357..4932193) Clostridium beijerinckii NCIMB 8052 5295430 YP_001311341.1 CDS Cbei_4275 NC_009617.1 4932998 4933567 D hypothetical protein 4932998..4933567 Clostridium beijerinckii NCIMB 8052 5295431 YP_001311342.1 CDS Cbei_4276 NC_009617.1 4933638 4934858 R PFAM: protein of unknown function DUF115; KEGG: cno:NT01CX_1884 hypothetical protein; hypothetical protein complement(4933638..4934858) Clostridium beijerinckii NCIMB 8052 5295432 YP_001311343.1 CDS Cbei_4277 NC_009617.1 4934881 4935918 R KEGG: cac:CAC2186 glycosyltransferase; glycosyltransferase complement(4934881..4935918) Clostridium beijerinckii NCIMB 8052 5295433 YP_001311344.1 CDS Cbei_4278 NC_009617.1 4935980 4937047 R PFAM: N-acetylneuraminic acid synthase, N-terminal domain; SAF domain; KEGG: cac:CAC2187 sialic acid synthase; N-acylneuraminate-9-phosphate synthase complement(4935980..4937047) Clostridium beijerinckii NCIMB 8052 5295434 YP_001311345.1 CDS Cbei_4279 NC_009617.1 4937095 4937490 R PFAM: MaoC domain protein dehydratase; KEGG: ctc:CTC00706 (de)hydratase mit MaoC domain; dehydratase complement(4937095..4937490) Clostridium beijerinckii NCIMB 8052 5295435 YP_001311346.1 CDS Cbei_4280 NC_009617.1 4937502 4938047 R PFAM: GCN5-related N-acetyltransferase; KEGG: gfo:orf2002 GNAT family acetyltransferase-possibly polyamine acetyltransferase; N-acetyltransferase GCN5 complement(4937502..4938047) Clostridium beijerinckii NCIMB 8052 5295436 YP_001311347.1 CDS Cbei_4281 NC_009617.1 4938050 4938787 R PFAM: acylneuraminate cytidylyltransferase; KEGG: cno:NT01CX_1888 spore coat polysaccharide biosynthesis protein SpsF; acylneuraminate cytidylyltransferase complement(4938050..4938787) Clostridium beijerinckii NCIMB 8052 5295437 YP_001311348.1 CDS Cbei_4282 NC_009617.1 4938852 4939877 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: ctc:CTC01712 UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase; polysaccharide biosynthesis protein CapD complement(4938852..4939877) Clostridium beijerinckii NCIMB 8052 5295438 YP_001311349.1 CDS Cbei_4283 NC_009617.1 4939922 4940272 R KEGG: cno:NT01CX_1885 hypothetical protein; hypothetical protein complement(4939922..4940272) Clostridium beijerinckii NCIMB 8052 5295439 YP_001311350.1 CDS Cbei_4284 NC_009617.1 4940304 4942037 R PFAM: protein of unknown function DUF115; KEGG: cno:NT01CX_1883 hypothetical protein; hypothetical protein complement(4940304..4942037) Clostridium beijerinckii NCIMB 8052 5295440 YP_001311351.1 CDS Cbei_4285 NC_009617.1 4942367 4943107 R KEGG: lca:LSEI_1352 predicted transposase; hypothetical protein complement(4942367..4943107) Clostridium beijerinckii NCIMB 8052 5295441 YP_001311352.1 CDS Cbei_4286 NC_009617.1 4943139 4943621 R KEGG: mbu:Mbur_0365 transposase; transposase complement(4943139..4943621) Clostridium beijerinckii NCIMB 8052 5295442 YP_001311353.1 CDS Cbei_4287 NC_009617.1 4943741 4945036 D PFAM: Integrase, catalytic region; KEGG: llm:llmg_1075 transposase for insertion sequence element IS712E; integrase catalytic subunit 4943741..4945036 Clostridium beijerinckii NCIMB 8052 5295443 YP_001311354.1 CDS Cbei_4288 NC_009617.1 4945029 4945781 D PFAM: IstB domain protein ATP-binding protein; SMART: ATPase AAA; KEGG: mac:MA4529 IstB helper protein; IstB ATP binding domain-containing protein 4945029..4945781 Clostridium beijerinckii NCIMB 8052 5295444 YP_001311355.1 CDS Cbei_4289 NC_009617.1 4946254 4947063 R PFAM: flagellin domain protein; KEGG: cno:NT01CX_1882 flagellin protein FliB(A); flagellin domain-containing protein complement(4946254..4947063) Clostridium beijerinckii NCIMB 8052 5295445 YP_001311356.1 CDS Cbei_4290 NC_009617.1 4947213 4947542 R KEGG: cac:CAC2204 hypothetical protein; hypothetical protein complement(4947213..4947542) Clostridium beijerinckii NCIMB 8052 5295446 YP_001311357.1 CDS Cbei_4291 NC_009617.1 4947583 4949160 R PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; KEGG: bsu:BG10921 flagellar hook-associated protein 2 (HAP2); flagellar hook-associated 2 domain-containing protein complement(4947583..4949160) Clostridium beijerinckii NCIMB 8052 5295447 YP_001311358.1 CDS Cbei_4292 NC_009617.1 4949209 4949589 R PFAM: flagellar protein FliS; KEGG: ctc:CTC01719 flagellar protein fliS; flagellar protein FliS complement(4949209..4949589) Clostridium beijerinckii NCIMB 8052 5295448 YP_001311359.1 CDS Cbei_4293 NC_009617.1 4949601 4949888 R KEGG: cno:NT01CX_1877 hypothetical protein; hypothetical protein complement(4949601..4949888) Clostridium beijerinckii NCIMB 8052 5295449 YP_001311360.1 CDS Cbei_4294 NC_009617.1 4949941 4950315 R PFAM: flagellar protein FlaG protein; KEGG: cac:CAC2208 flagellin family protein, YvyC B.subtilis ortholog; flagellar protein FlaG protein complement(4949941..4950315) Clostridium beijerinckii NCIMB 8052 5295450 YP_001311361.1 CDS Cbei_4295 NC_009617.1 4950359 4950577 R PFAM: carbon storage regulator; KEGG: cno:NT01CX_1875 carbon storage regulator; carbon storage regulator CsrA complement(4950359..4950577) Clostridium beijerinckii NCIMB 8052 5295451 YP_001311362.1 CDS Cbei_4296 NC_009617.1 4950582 4951007 R binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW complement(4950582..4951007) Clostridium beijerinckii NCIMB 8052 5295452 YP_001311363.1 CDS Cbei_4297 NC_009617.1 4951028 4952011 R TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: cno:NT01CX_1873 flagellar hook-associated protein 3; flagellar hook-associated protein 3 complement(4951028..4952011) Clostridium beijerinckii NCIMB 8052 5295453 YP_001311364.1 CDS Cbei_4298 NC_009617.1 4952124 4953875 R TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: ctc:CTC01724 flagellar hook-associated protein 1; flagellar hook-associated protein FlgK complement(4952124..4953875) Clostridium beijerinckii NCIMB 8052 5295454 YP_001311365.1 CDS Cbei_4299 NC_009617.1 4954032 4954442 R PFAM: FlgN family protein; KEGG: ctc:CTC01725 hypothetical protein; FlgN family protein complement(4954032..4954442) Clostridium beijerinckii NCIMB 8052 5295455 YP_001311366.1 CDS Cbei_4300 NC_009617.1 4954445 4954720 R PFAM: Anti-sigma-28 factor, FlgM family protein; KEGG: cac:CAC2214 regulator of flagellin synthesis, FLGM; anti-sigma-28 factor FlgM complement(4954445..4954720) Clostridium beijerinckii NCIMB 8052 5295456 YP_001311367.1 CDS Cbei_4301 NC_009617.1 4954897 4955709 R TIGRFAM: phage replisome organizer, KEGG: lmo:lmo2317 similar to protein gp49; phage replisome organizer complement(4954897..4955709) Clostridium beijerinckii NCIMB 8052 5295457 YP_001311368.1 CDS Cbei_4302 NC_009617.1 4955939 4957135 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein complement(4955939..4957135) Clostridium beijerinckii NCIMB 8052 5295458 YP_001311369.1 CDS Cbei_4303 NC_009617.1 4957119 4958117 R PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: cno:NT01CX_1868 flagellar motor switch protein FliM; flagellar motor switch protein FliM complement(4957119..4958117) Clostridium beijerinckii NCIMB 8052 5295459 YP_001311370.1 CDS Cbei_4304 NC_009617.1 4958140 4958541 R PFAM: CheW domain protein; KEGG: cno:NT01CX_1867 chemotaxis signal transduction protein CheW; CheW protein complement(4958140..4958541) Clostridium beijerinckii NCIMB 8052 5295460 YP_001311371.1 CDS Cbei_4305 NC_009617.1 4958671 4959030 R PFAM: response regulator receiver; KEGG: ctc:CTC01729 chemotaxis protein cheY; response regulator receiver protein complement(4958671..4959030) Clostridium beijerinckii NCIMB 8052 5295461 YP_001311372.1 CDS Cbei_4306 NC_009617.1 4959050 4959652 R PFAM: CheC domain protein; KEGG: cac:CAC2219 chemotaxis protein CheC; chemotaxis protein CheC complement(4959050..4959652) Clostridium beijerinckii NCIMB 8052 5295462 YP_001311373.1 CDS Cbei_4307 NC_009617.1 4959847 4961910 R PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; P2 response regulator binding domain protein; KEGG: cno:NT01CX_1864 chemotaxis protein CheA; chemotaxis protein CheA complement(4959847..4961910) Clostridium beijerinckii NCIMB 8052 5295463 YP_001311374.1 CDS Cbei_4308 NC_009617.1 4961979 4962692 R PFAM: MCP methyltransferase, CheR-type; KEGG: cno:NT01CX_1863 chemotaxis protein methyltransferase CheR; protein-glutamate O-methyltransferase complement(4961979..4962692) Clostridium beijerinckii NCIMB 8052 5295464 YP_001311375.1 CDS Cbei_4309 NC_009617.1 4962701 4963807 R PFAM: CheB methylesterase; response regulator receiver; KEGG: cno:NT01CX_1862 protein-glutamate methylesterase CheB; response regulator receiver modulated CheB methylesterase complement(4962701..4963807) Clostridium beijerinckii NCIMB 8052 5295465 YP_001311376.1 CDS Cbei_4310 NC_009617.1 4963831 4964319 R catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD complement(4963831..4964319) Clostridium beijerinckii NCIMB 8052 5295466 YP_001311377.1 CDS Cbei_4311 NC_009617.1 4964329 4964778 R PFAM: CheW domain protein; KEGG: cno:NT01CX_1860 chemotaxis protein CheW; CheW protein complement(4964329..4964778) Clostridium beijerinckii NCIMB 8052 5295467 YP_001311378.1 CDS Cbei_4312 NC_009617.1 4964793 4966742 R PFAM: protein of unknown function DUF342; KEGG: cno:NT01CX_1859 hypothetical protein; hypothetical protein complement(4964793..4966742) Clostridium beijerinckii NCIMB 8052 5295468 YP_001311379.1 CDS Cbei_4313 NC_009617.1 4966861 4967595 R PFAM: aminotransferase, class IV; KEGG: cac:CAC2226 enzyme of IlvE/PabC family (branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase); class IV aminotransferase complement(4966861..4967595) Clostridium beijerinckii NCIMB 8052 5295469 YP_001311380.1 CDS Cbei_4314 NC_009617.1 4967869 4968507 R TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: cpf:CPF_2313 HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD family hydrolase complement(4967869..4968507) Clostridium beijerinckii NCIMB 8052 5295470 YP_001311381.1 CDS Cbei_4315 NC_009617.1 4969048 4970430 R PFAM: transposase, IS4 family protein; KEGG: wol:WD0563 transposase, IS4 family; transposase, IS4 family protein complement(4969048..4970430) Clostridium beijerinckii NCIMB 8052 5295471 YP_001311382.1 CDS Cbei_4316 NC_009617.1 4970836 4972029 R PFAM: aminotransferase, class I and II; KEGG: ctc:CTC01294 aspartate aminotransferase; class I and II aminotransferase complement(4970836..4972029) Clostridium beijerinckii NCIMB 8052 5295472 YP_001311383.1 CDS Cbei_4317 NC_009617.1 4972413 4972748 R KEGG: cno:NT01CX_1855 hypothetical protein; hypothetical protein complement(4972413..4972748) Clostridium beijerinckii NCIMB 8052 5295473 YP_001311384.1 CDS Cbei_4318 NC_009617.1 4973128 4976637 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cpf:CPF_2318 pyruvate-flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein complement(4973128..4976637) Clostridium beijerinckii NCIMB 8052 5295474 YP_001311385.1 CDS Cbei_4319 NC_009617.1 4976788 4977219 R An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin complement(4976788..4977219) Clostridium beijerinckii NCIMB 8052 5295475 YP_001311386.1 CDS murG NC_009617.1 4977369 4978448 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase complement(4977369..4978448) Clostridium beijerinckii NCIMB 8052 5295476 YP_001311387.1 CDS Cbei_4321 NC_009617.1 4978536 4980302 R TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: cac:CAC2232 SsDNA exonuclease, RecJ; single-stranded-DNA-specific exonuclease RecJ complement(4978536..4980302) Clostridium beijerinckii NCIMB 8052 5295477 YP_001311388.1 CDS Cbei_4322 NC_009617.1 4980441 4980992 R TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; KEGG: cpe:CPE2067 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein; DJ-1 family protein complement(4980441..4980992) Clostridium beijerinckii NCIMB 8052 5295478 YP_001311389.1 CDS Cbei_4323 NC_009617.1 4981463 4984375 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A complement(4981463..4984375) Clostridium beijerinckii NCIMB 8052 5295479 YP_001311390.1 CDS Cbei_4324 NC_009617.1 4984507 4986456 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B complement(4984507..4986456) Clostridium beijerinckii NCIMB 8052 5295480 YP_001311391.1 CDS Cbei_4325 NC_009617.1 4986900 4988288 R PFAM: glycosyl transferase, family 2; KEGG: cpr:CPR_2042 glycosyl transferase, group 2 family protein; glycosyl transferase family protein complement(4986900..4988288) Clostridium beijerinckii NCIMB 8052 5295481 YP_001311392.1 CDS Cbei_4326 NC_009617.1 4988509 4989495 R PFAM: Rhomboid family protein; KEGG: ctc:CTC00530 conserved membrane protein (rhomboid family); rhomboid family protein complement(4988509..4989495) Clostridium beijerinckii NCIMB 8052 5295482 YP_001311393.1 CDS Cbei_4327 NC_009617.1 4989746 4991530 R TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; Oligopeptidase F; KEGG: cno:NT01CX_1564 oligoendopeptidase F; oligoendopeptidase F complement(4989746..4991530) Clostridium beijerinckii NCIMB 8052 5295483 YP_001311394.1 CDS Cbei_4328 NC_009617.1 4991660 4992061 R KEGG: cpf:CPF_1707 hypothetical protein; hypothetical protein complement(4991660..4992061) Clostridium beijerinckii NCIMB 8052 5295484 YP_001311395.1 CDS Cbei_4329 NC_009617.1 4992473 4992886 D KEGG: cpf:CPF_1708 hypothetical protein; hypothetical protein 4992473..4992886 Clostridium beijerinckii NCIMB 8052 5295485 YP_001311396.1 CDS Cbei_4330 NC_009617.1 4993436 4993663 R TIGRFAM: D-alanyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: dsy:DSY0223 hypothetical protein; D-alanyl carrier protein complement(4993436..4993663) Clostridium beijerinckii NCIMB 8052 5295486 YP_001311397.1 CDS Cbei_4331 NC_009617.1 4993720 4994874 R PFAM: membrane bound O-acyl transferase, MBOAT family protein; KEGG: dsy:DSY0222 hypothetical protein; membrane bound O-acyl transferase, MBOAT family protein complement(4993720..4994874) Clostridium beijerinckii NCIMB 8052 5295487 YP_001311398.1 CDS Cbei_4332 NC_009617.1 4994874 4996388 R TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; KEGG: dsy:DSY0221 hypothetical protein; amino acid adenylation domain-containing protein complement(4994874..4996388) Clostridium beijerinckii NCIMB 8052 5295488 YP_001311399.1 CDS Cbei_4333 NC_009617.1 4996509 4997693 R PFAM: DltD, C-terminal domain protein; DltD, central domain protein; KEGG: dsy:DSY0224 hypothetical protein; DltD C-terminal domain-containing protein complement(4996509..4997693) Clostridium beijerinckii NCIMB 8052 5295489 YP_001311400.1 CDS Cbei_4334 NC_009617.1 4997975 4998646 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ctc:CTC02361 high-affinity Zinc uptake system ATP-binding protein znuC; ABC transporter 4997975..4998646 Clostridium beijerinckii NCIMB 8052 5295490 YP_001311401.1 CDS Cbei_4335 NC_009617.1 4998680 4999480 D PFAM: ABC transporter; KEGG: cpr:CPR_1443 metal (zinc) transport protein (ABC transporter permease) ZurM; ABC transporter 4998680..4999480 Clostridium beijerinckii NCIMB 8052 5295491 YP_001311402.1 CDS Cbei_4336 NC_009617.1 4999497 5000672 R PFAM: aminotransferase, class V; KEGG: tde:TDE1415 nucleotidyl transferase/aminotransferase, class V; class V aminotransferase complement(4999497..5000672) Clostridium beijerinckii NCIMB 8052 5295492 YP_001311403.1 CDS Cbei_4337 NC_009617.1 5000678 5001811 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: tde:TDE1414 phosphonopyruvate decarboxylase; thiamine pyrophosphate binding domain-containing protein complement(5000678..5001811) Clostridium beijerinckii NCIMB 8052 5295493 YP_001311404.1 CDS Cbei_4338 NC_009617.1 5001943 5003241 R TIGRFAM: cytidyltransferase-related domain; PFAM: cytidylyltransferase; KEGG: bfr:BF2578 phosphoenolpyruvate phosphomutase; cytidyltransferase-like protein complement(5001943..5003241) Clostridium beijerinckii NCIMB 8052 5295494 YP_001311405.1 CDS Cbei_4339 NC_009617.1 5003349 5004140 R PFAM: Nucleotidyl transferase; KEGG: ctc:CTC01704 nucleotidyl transferase; nucleotidyl transferase complement(5003349..5004140) Clostridium beijerinckii NCIMB 8052 5295495 YP_001311406.1 CDS Cbei_4340 NC_009617.1 5004461 5005459 R hypothetical protein complement(5004461..5005459) Clostridium beijerinckii NCIMB 8052 5295496 YP_001311407.1 CDS Cbei_4341 NC_009617.1 5005766 5006425 R KEGG: cno:NT01CX_2433 hypothetical protein; hypothetical protein complement(5005766..5006425) Clostridium beijerinckii NCIMB 8052 5295497 YP_001311408.1 CDS Cbei_4342 NC_009617.1 5006584 5007438 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: btk:BT9727_3965 ABC transporter ATP-binding protein; ABC transporter complement(5006584..5007438) Clostridium beijerinckii NCIMB 8052 5295498 YP_001311409.1 CDS Cbei_4343 NC_009617.1 5007616 5007996 R PFAM: GntR family transcriptional regulator; KEGG: cno:NT01CX_2435 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(5007616..5007996) Clostridium beijerinckii NCIMB 8052 5295499 YP_001311410.1 CDS Cbei_4344 NC_009617.1 5008156 5009559 R PFAM: sodium:dicarboxylate symporter; KEGG: cjj:CJJ81176_0052 sodium/dicarboxylate symporter; sodium:dicarboxylate symporter complement(5008156..5009559) Clostridium beijerinckii NCIMB 8052 5295500 YP_001311411.1 CDS Cbei_4345 NC_009617.1 5009823 5010758 R PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: gvi:gll3978 unknown protein; succinylglutamate desuccinylase/aspartoacylase complement(5009823..5010758) Clostridium beijerinckii NCIMB 8052 5295501 YP_001311412.1 CDS Cbei_4346 NC_009617.1 5010755 5011690 R PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: gvi:gll3979 unknown protein; succinylglutamate desuccinylase/aspartoacylase complement(5010755..5011690) Clostridium beijerinckii NCIMB 8052 5295502 YP_001311413.1 CDS Cbei_4347 NC_009617.1 5011910 5013250 R TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; KEGG: cac:CAC1427 4-aminobutyrate aminotransferase (PLP-dependent); 4-aminobutyrate aminotransferase complement(5011910..5013250) Clostridium beijerinckii NCIMB 8052 5295503 YP_001311414.1 CDS Cbei_4348 NC_009617.1 5013544 5014761 R PFAM: purine catabolism PurC domain protein; KEGG: cac:CAC1426 possible transcriptional regulator from leucine-rich protein (LRPR) family; PucR family transcriptional regulator complement(5013544..5014761) Clostridium beijerinckii NCIMB 8052 5295504 YP_001311415.1 CDS Cbei_4349 NC_009617.1 5015078 5015785 R TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB1005 glutamine ABC transporter permease; polar amino acid ABC transporter inner membrane subunit complement(5015078..5015785) Clostridium beijerinckii NCIMB 8052 5295505 YP_001311416.1 CDS Cbei_4350 NC_009617.1 5015844 5016728 R PFAM: extracellular solute-binding protein, family 3; KEGG: bja:blr2224 ABC transporter amino acid-binding protein; extracellular solute-binding protein complement(5015844..5016728) Clostridium beijerinckii NCIMB 8052 5295506 YP_001311417.1 CDS Cbei_4351 NC_009617.1 5016810 5017535 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mma:MM1941 glutamine transporter ATP-binding protein; ABC transporter complement(5016810..5017535) Clostridium beijerinckii NCIMB 8052 5295507 YP_001311418.1 CDS Cbei_4352 NC_009617.1 5017816 5018610 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: spo:SPCC965.09 hypothetical protein; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(5017816..5018610) Clostridium beijerinckii NCIMB 8052 5295508 YP_001311419.1 CDS Cbei_4353 NC_009617.1 5018591 5020036 R PFAM: amino acid permease-associated region; KEGG: cac:CAC0852 amino acid permease; amino acid permease-associated protein complement(5018591..5020036) Clostridium beijerinckii NCIMB 8052 5295509 YP_001311420.1 CDS Cbei_4354 NC_009617.1 5020143 5021273 R PFAM: iron-containing alcohol dehydrogenase; KEGG: aae:aq_1145 1,3 propanediol dehydrogenase; iron-containing alcohol dehydrogenase complement(5020143..5021273) Clostridium beijerinckii NCIMB 8052 5295510 YP_001311421.1 CDS Cbei_4355 NC_009617.1 5021644 5022054 D KEGG: ctc:CTC02534 hypothetical protein; hypothetical protein 5021644..5022054 Clostridium beijerinckii NCIMB 8052 5295511 YP_001311422.1 CDS Cbei_4356 NC_009617.1 5022494 5023429 R TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein, beta subunit; KEGG: cth:Cthe_1840 cysteine synthase A; cysteine synthase A complement(5022494..5023429) Clostridium beijerinckii NCIMB 8052 5295512 YP_001311423.1 CDS Cbei_4357 NC_009617.1 5023873 5024394 R PFAM: nitroreductase; KEGG: bth:BT_1148 NADH dehydrogenase/NAD(P)H nitroreductase; nitroreductase complement(5023873..5024394) Clostridium beijerinckii NCIMB 8052 5295513 YP_001311424.1 CDS Cbei_4358 NC_009617.1 5024542 5025381 R PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: cpr:CPR_0474 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(5024542..5025381) Clostridium beijerinckii NCIMB 8052 5295514 YP_001311425.1 CDS Cbei_4359 NC_009617.1 5025619 5026941 D PFAM: glycoside hydrolase, family 4; KEGG: bha:BH2228 melibiase (alpha-galactosidase); glycoside hydrolase 5025619..5026941 Clostridium beijerinckii NCIMB 8052 5295515 YP_001311426.1 CDS Cbei_4360 NC_009617.1 5027124 5027444 R PFAM: Domain of unknown function DUF1874; KEGG: bsu:BG12113 hypothetical protein; hypothetical protein complement(5027124..5027444) Clostridium beijerinckii NCIMB 8052 5295516 YP_001311427.1 CDS Cbei_4361 NC_009617.1 5027636 5028658 R PFAM: Radical SAM domain protein; KEGG: ctc:CTC00900 spore photoproduct lyase; radical SAM domain-containing protein complement(5027636..5028658) Clostridium beijerinckii NCIMB 8052 5295517 YP_001311428.1 CDS Cbei_4362 NC_009617.1 5028789 5029307 R hypothetical protein complement(5028789..5029307) Clostridium beijerinckii NCIMB 8052 5295518 YP_001311429.1 CDS Cbei_4363 NC_009617.1 5029782 5030252 D hypothetical protein 5029782..5030252 Clostridium beijerinckii NCIMB 8052 5295519 YP_001311430.1 CDS Cbei_4364 NC_009617.1 5030268 5030573 D KEGG: nfa:nfa56440 hypothetical protein; hypothetical protein 5030268..5030573 Clostridium beijerinckii NCIMB 8052 5295520 YP_001311431.1 CDS Cbei_4365 NC_009617.1 5030981 5032198 D KEGG: cac:CAC0208 predicted membrane protein; CF-20 family; hypothetical protein 5030981..5032198 Clostridium beijerinckii NCIMB 8052 5295521 YP_001311432.1 CDS Cbei_4366 NC_009617.1 5032516 5033652 R KEGG: cac:CAC0753 polyA polymerase related protein (HD hydrolase) and P-loop ATP-ase domain; PolyA polymerase-like protein complement(5032516..5033652) Clostridium beijerinckii NCIMB 8052 5295522 YP_001311433.1 CDS Cbei_4367 NC_009617.1 5033656 5034459 R KEGG: cac:CAC0752 homolog of eukaryotic DNA ligase III; DNA ligase-like protein complement(5033656..5034459) Clostridium beijerinckii NCIMB 8052 5295523 YP_001311434.1 CDS Cbei_4368 NC_009617.1 5035332 5035685 R KEGG: dsy:DSY4340 hypothetical protein; hypothetical protein complement(5035332..5035685) Clostridium beijerinckii NCIMB 8052 5295524 YP_001311435.1 CDS Cbei_4369 NC_009617.1 5036156 5036992 R KEGG: cpe:CPE0425 hypothetical protein; hypothetical protein complement(5036156..5036992) Clostridium beijerinckii NCIMB 8052 5295525 YP_001311436.1 CDS Cbei_4370 NC_009617.1 5037239 5037949 R PFAM: Endonuclease V; KEGG: cac:CAC0363 deoxyinosine 3'endonuclease; deoxyribonuclease V complement(5037239..5037949) Clostridium beijerinckii NCIMB 8052 5295526 YP_001311437.1 CDS Cbei_4371 NC_009617.1 5038582 5039028 R KEGG: btk:BT9727_3064 hypothetical protein; hypothetical protein complement(5038582..5039028) Clostridium beijerinckii NCIMB 8052 5295527 YP_001311438.1 CDS Cbei_4372 NC_009617.1 5039044 5039283 R hypothetical protein complement(5039044..5039283) Clostridium beijerinckii NCIMB 8052 5295528 YP_001311439.1 CDS Cbei_4373 NC_009617.1 5039299 5039703 R KEGG: btk:BT9727_3065 hypothetical protein; hypothetical protein complement(5039299..5039703) Clostridium beijerinckii NCIMB 8052 5295529 YP_001311440.1 CDS Cbei_4375 NC_009617.1 5040486 5041070 R hypothetical protein complement(5040486..5041070) Clostridium beijerinckii NCIMB 8052 5296437 YP_001311441.1 CDS Cbei_4376 NC_009617.1 5041085 5048746 R TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: cth:Cthe_0009 YD repeat containing protein; YD repeat-containing protein complement(5041085..5048746) Clostridium beijerinckii NCIMB 8052 5295531 YP_001311442.1 CDS Cbei_4377 NC_009617.1 5048936 5049709 R hypothetical protein complement(5048936..5049709) Clostridium beijerinckii NCIMB 8052 5295532 YP_001311443.1 CDS Cbei_4378 NC_009617.1 5049712 5050233 R hypothetical protein complement(5049712..5050233) Clostridium beijerinckii NCIMB 8052 5295533 YP_001311444.1 CDS Cbei_4379 NC_009617.1 5050230 5051324 R PFAM: pentapeptide repeat protein; KEGG: ddi:DDBDRAFT_0216618 hypothetical protein; pentapeptide repeat-containing protein complement(5050230..5051324) Clostridium beijerinckii NCIMB 8052 5295534 YP_001311445.1 CDS Cbei_4380 NC_009617.1 5051390 5052832 R hypothetical protein complement(5051390..5052832) Clostridium beijerinckii NCIMB 8052 5295535 YP_001311446.1 CDS Cbei_4381 NC_009617.1 5052920 5053537 R hypothetical protein complement(5052920..5053537) Clostridium beijerinckii NCIMB 8052 5295536 YP_001311447.1 CDS Cbei_4382 NC_009617.1 5053607 5055049 R hypothetical protein complement(5053607..5055049) Clostridium beijerinckii NCIMB 8052 5295537 YP_001311448.1 CDS Cbei_4383 NC_009617.1 5056704 5057414 R PFAM: beta-lactamase domain protein; KEGG: cac:CAC0364 metal-dependent hydrolase of the metallobeta-lactamase superfamily; beta-lactamase domain-containing protein complement(5056704..5057414) Clostridium beijerinckii NCIMB 8052 5295538 YP_001311449.1 CDS Cbei_4384 NC_009617.1 5057486 5057929 R hypothetical protein complement(5057486..5057929) Clostridium beijerinckii NCIMB 8052 5295539 YP_001311450.1 CDS Cbei_4385 NC_009617.1 5057941 5059287 R PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_0126 pneumococcal surface protein A; cell wall binding repeat-containing protein complement(5057941..5059287) Clostridium beijerinckii NCIMB 8052 5295540 YP_001311451.1 CDS Cbei_4386 NC_009617.1 5059344 5059619 R PFAM: cell wall binding repeat-containing protein; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; cell wall binding repeat-containing protein complement(5059344..5059619) Clostridium beijerinckii NCIMB 8052 5295541 YP_001311452.1 CDS Cbei_4387 NC_009617.1 5059636 5061069 R hypothetical protein complement(5059636..5061069) Clostridium beijerinckii NCIMB 8052 5295542 YP_001311453.1 CDS Cbei_4388 NC_009617.1 5061318 5061965 R hypothetical protein complement(5061318..5061965) Clostridium beijerinckii NCIMB 8052 5295543 YP_001311454.1 CDS Cbei_4389 NC_009617.1 5062101 5063897 R PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_1965 choline binding protein PcpA; cell wall binding repeat-containing protein complement(5062101..5063897) Clostridium beijerinckii NCIMB 8052 5295544 YP_001311455.1 CDS Cbei_4390 NC_009617.1 5063887 5065392 R hypothetical protein complement(5063887..5065392) Clostridium beijerinckii NCIMB 8052 5295545 YP_001311456.1 CDS Cbei_4391 NC_009617.1 5065435 5065794 R hypothetical protein complement(5065435..5065794) Clostridium beijerinckii NCIMB 8052 5295546 YP_001311457.1 CDS Cbei_4392 NC_009617.1 5065824 5066351 R hypothetical protein complement(5065824..5066351) Clostridium beijerinckii NCIMB 8052 5295547 YP_001311458.1 CDS Cbei_4393 NC_009617.1 5066379 5066978 R hypothetical protein complement(5066379..5066978) Clostridium beijerinckii NCIMB 8052 5295548 YP_001311459.1 CDS Cbei_4394 NC_009617.1 5067004 5068428 R KEGG: bfr:BF1944 hypothetical protein; hypothetical protein complement(5067004..5068428) Clostridium beijerinckii NCIMB 8052 5295549 YP_001311460.1 CDS Cbei_4395 NC_009617.1 5068418 5069029 R hypothetical protein complement(5068418..5069029) Clostridium beijerinckii NCIMB 8052 5295550 YP_001311461.1 CDS Cbei_4396 NC_009617.1 5069121 5069900 R hypothetical protein complement(5069121..5069900) Clostridium beijerinckii NCIMB 8052 5295551 YP_001311462.1 CDS Cbei_4397 NC_009617.1 5070578 5073208 R molecular chaperone-like protein complement(5070578..5073208) Clostridium beijerinckii NCIMB 8052 5295552 YP_001311463.1 CDS Cbei_4398 NC_009617.1 5073282 5073980 R hypothetical protein complement(5073282..5073980) Clostridium beijerinckii NCIMB 8052 5295553 YP_001311464.1 CDS Cbei_4399 NC_009617.1 5073977 5075257 R hypothetical protein complement(5073977..5075257) Clostridium beijerinckii NCIMB 8052 5295554 YP_001311465.1 CDS Cbei_4400 NC_009617.1 5075330 5077168 R KEGG: pfa:PF11_0486 MAEBL; Serine/threonine protein phosphatase-like protein complement(5075330..5077168) Clostridium beijerinckii NCIMB 8052 5295555 YP_001311466.1 CDS Cbei_4401 NC_009617.1 5077231 5078079 R SMART: protein phosphatase 2C domain protein; KEGG: lmo:lmo1821 similar to phosphoprotein phosphatase; protein phosphatase 2C domain-containing protein complement(5077231..5078079) Clostridium beijerinckii NCIMB 8052 5295556 YP_001311467.1 CDS Cbei_4402 NC_009617.1 5078091 5078591 R KEGG: sil:SPO1063 hypothetical protein; FHA domain-containing protein complement(5078091..5078591) Clostridium beijerinckii NCIMB 8052 5295557 YP_001311468.1 CDS Cbei_4403 NC_009617.1 5078674 5079243 R hypothetical protein complement(5078674..5079243) Clostridium beijerinckii NCIMB 8052 5295558 YP_001311469.1 CDS Cbei_4404 NC_009617.1 5079404 5079841 R PFAM: heat shock protein DnaJ domain protein; KEGG: sth:STH505 heat shock protein, DnaJ; heat shock protein DnaJ domain-containing protein complement(5079404..5079841) Clostridium beijerinckii NCIMB 8052 5295559 YP_001311470.1 CDS Cbei_4405 NC_009617.1 5079946 5080371 R hypothetical protein complement(5079946..5080371) Clostridium beijerinckii NCIMB 8052 5295560 YP_001311471.1 CDS Cbei_4406 NC_009617.1 5080399 5080824 R hypothetical protein complement(5080399..5080824) Clostridium beijerinckii NCIMB 8052 5295561 YP_001311472.1 CDS Cbei_4407 NC_009617.1 5080882 5083059 R hypothetical protein complement(5080882..5083059) Clostridium beijerinckii NCIMB 8052 5295562 YP_001311473.1 CDS Cbei_4408 NC_009617.1 5083442 5084581 R TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: dsy:DSY3820 hypothetical protein; carboxynorspermidine decarboxylase complement(5083442..5084581) Clostridium beijerinckii NCIMB 8052 5295563 YP_001311474.1 CDS Cbei_4409 NC_009617.1 5084991 5086193 R PFAM: Saccharopine dehydrogenase; KEGG: bha:BH3957 hypothetical protein; saccharopine dehydrogenase complement(5084991..5086193) Clostridium beijerinckii NCIMB 8052 5295564 YP_001311475.1 CDS Cbei_4410 NC_009617.1 5086337 5087191 R catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase complement(5086337..5087191) Clostridium beijerinckii NCIMB 8052 5295565 YP_001311476.1 CDS Cbei_4411 NC_009617.1 5087192 5088649 R PFAM: aminotransferase, class V; Orn/Lys/Arg decarboxylase, major region; aromatic amino acid beta-eliminating lyase/threonine aldolase; Orn/Lys/Arg decarboxylase domain protein; KEGG: dsy:DSY0236 hypothetical protein; Orn/Lys/Arg decarboxylase complement(5087192..5088649) Clostridium beijerinckii NCIMB 8052 5295566 YP_001311477.1 CDS Cbei_4412 NC_009617.1 5088668 5089483 R S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine; S-adenosylmethionine decarboxylase complement(5088668..5089483) Clostridium beijerinckii NCIMB 8052 5295567 YP_001311478.1 CDS Cbei_4413 NC_009617.1 5089770 5090462 R KEGG: mba:Mbar_A0067 hypothetical protein; hypothetical protein complement(5089770..5090462) Clostridium beijerinckii NCIMB 8052 5295568 YP_001311479.1 CDS Cbei_4414 NC_009617.1 5090686 5091003 R KEGG: cpf:CPF_1367 hypothetical protein; hypothetical protein complement(5090686..5091003) Clostridium beijerinckii NCIMB 8052 5295569 YP_001311480.1 CDS Cbei_4415 NC_009617.1 5091231 5091833 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cac:CAC3581 HAD superfamily hydrolase; HAD family hydrolase complement(5091231..5091833) Clostridium beijerinckii NCIMB 8052 5295570 YP_001311481.1 CDS Cbei_4416 NC_009617.1 5092149 5092712 R TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: chy:CHY_1871 HDIG domain protein; metal dependent phosphohydrolase complement(5092149..5092712) Clostridium beijerinckii NCIMB 8052 5295571 YP_001311482.1 CDS Cbei_4417 NC_009617.1 5092960 5093787 R hypothetical protein complement(5092960..5093787) Clostridium beijerinckii NCIMB 8052 5295572 YP_001311483.1 CDS Cbei_4418 NC_009617.1 5094158 5094610 D KEGG: ddi:DDB_0232331 RNA-binding region-containing protein (RNP-1); RNA-binding region-containing protein (RNP-1) 5094158..5094610 Clostridium beijerinckii NCIMB 8052 5295573 YP_001311484.1 CDS Cbei_4419 NC_009617.1 5094908 5096077 D catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase 5094908..5096077 Clostridium beijerinckii NCIMB 8052 5295574 YP_001311485.1 CDS Cbei_4420 NC_009617.1 5096185 5097177 D TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: cac:CAC2960 UDP-galactose 4-epimerase; UDP-glucose 4-epimerase 5096185..5097177 Clostridium beijerinckii NCIMB 8052 5295575 YP_001311486.1 CDS Cbei_4421 NC_009617.1 5097361 5098860 D catalyzes the formation of alpha-D-glucose 1-phosphate and UDP-galactose from UDP-glucose and alpha-D-galactose 1-phosphate in galactose metabolism; galactose-1-phosphate uridylyltransferase 5097361..5098860 Clostridium beijerinckii NCIMB 8052 5295576 YP_001311487.1 CDS Cbei_4422 NC_009617.1 5098873 5099886 D PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: cac:CAC2962 transcriptional regulators of the LacI family; alanine racemase 5098873..5099886 Clostridium beijerinckii NCIMB 8052 5295577 YP_001311488.1 CDS Cbei_4423 NC_009617.1 5100402 5101826 D PFAM: Radical SAM domain protein; KEGG: cth:Cthe_0407 radical SAM; radical SAM domain-containing protein 5100402..5101826 Clostridium beijerinckii NCIMB 8052 5295578 YP_001311489.1 CDS Cbei_4424 NC_009617.1 5101829 5102575 D KEGG: cth:Cthe_0406 hypothetical protein; hypothetical protein 5101829..5102575 Clostridium beijerinckii NCIMB 8052 5295579 YP_001311490.1 CDS Cbei_4425 NC_009617.1 5103256 5103828 R PFAM: carbonic anhydrase; KEGG: cpf:CPF_0414 carbonic anhydrase; carbonic anhydrase complement(5103256..5103828) Clostridium beijerinckii NCIMB 8052 5295580 YP_001311491.1 CDS Cbei_4426 NC_009617.1 5103937 5104980 R KEGG: ctc:CTC00860 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein complement(5103937..5104980) Clostridium beijerinckii NCIMB 8052 5295581 YP_001311492.1 CDS Cbei_4427 NC_009617.1 5105037 5106098 R KEGG: cpe:CPE1341 probable galactoside ABC transporter; galactoside ABC transporter complement(5105037..5106098) Clostridium beijerinckii NCIMB 8052 5295582 YP_001311493.1 CDS Cbei_4428 NC_009617.1 5106473 5107558 R KEGG: ctc:CTC00860 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein complement(5106473..5107558) Clostridium beijerinckii NCIMB 8052 5295583 YP_001311494.1 CDS Cbei_4429 NC_009617.1 5107609 5108589 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ret:RHE_CH00492 probable sugar ABC transporter substrate-binding protein; periplasmic binding protein/LacI transcriptional regulator complement(5107609..5108589) Clostridium beijerinckii NCIMB 8052 5295584 YP_001311495.1 CDS Cbei_4430 NC_009617.1 5108589 5110397 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; Cache domain protein; histidine kinase internal region; KEGG: bha:BH3447 two-component sensor histidine kinase; multi-sensor signal transduction histidine kinase complement(5108589..5110397) Clostridium beijerinckii NCIMB 8052 5295585 YP_001311496.1 CDS Cbei_4431 NC_009617.1 5110409 5112025 R PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: tte:TTE2343 AraC-type DNA-binding domain-containing proteins; response regulator receiver protein complement(5110409..5112025) Clostridium beijerinckii NCIMB 8052 5295586 YP_001311497.1 CDS Cbei_4432 NC_009617.1 5112362 5113384 R PFAM: inner-membrane translocator; KEGG: cpf:CPF_1550 galactoside ABC transporter permease; monosaccharide-transporting ATPase complement(5112362..5113384) Clostridium beijerinckii NCIMB 8052 5295587 YP_001311498.1 CDS Cbei_4433 NC_009617.1 5113794 5115293 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ctc:CTC00861 galactoside transport ATP-binding protein mglA; ABC transporter complement(5113794..5115293) Clostridium beijerinckii NCIMB 8052 5295588 YP_001311499.1 CDS Cbei_4434 NC_009617.1 5115382 5116452 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ctc:CTC00860 D-galactose-binding periplasmic protein precursor; periplasmic binding protein/LacI transcriptional regulator complement(5115382..5116452) Clostridium beijerinckii NCIMB 8052 5295589 YP_001311500.1 CDS Cbei_4435 NC_009617.1 5116867 5118573 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC1387 membrane associated chemotaxis sensory transducer protein (MSP domain and HamP domain); methyl-accepting chemotaxis sensory transducer complement(5116867..5118573) Clostridium beijerinckii NCIMB 8052 5295590 YP_001311501.1 CDS Cbei_4436 NC_009617.1 5118602 5120032 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: tcx:Tcr_1297 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); diguanylate cyclase/phosphodiesterase complement(5118602..5120032) Clostridium beijerinckii NCIMB 8052 5295591 YP_001311502.1 CDS Cbei_4437 NC_009617.1 5120423 5121022 D PFAM: phage integrase family protein; KEGG: lbl:LBL_1710 site-specific recombinase XerD; phage integrase family protein 5120423..5121022 Clostridium beijerinckii NCIMB 8052 5295592 YP_001311503.1 CDS Cbei_4438 NC_009617.1 5121106 5122854 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC1387 membrane associated chemotaxis sensory transducer protein (MSP domain and HamP domain); methyl-accepting chemotaxis sensory transducer complement(5121106..5122854) Clostridium beijerinckii NCIMB 8052 5295593 YP_001311504.1 CDS thiH NC_009617.1 5123093 5124511 R in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and IscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; in Thermotoga this enzyme has an extra C-terminal domain; thiamine biosynthesis protein ThiH complement(5123093..5124511) Clostridium beijerinckii NCIMB 8052 5295594 YP_001311505.1 CDS Cbei_4440 NC_009617.1 5124647 5124898 R KEGG: cac:CAC0487 uncharacterized protein, ortholog of Thermotoga maritima (4981823); hypothetical protein complement(5124647..5124898) Clostridium beijerinckii NCIMB 8052 5295595 YP_001311506.1 CDS Cbei_4441 NC_009617.1 5125250 5127346 R PFAM: glycoside hydrolase, clan GH-D; KEGG: aor:AO090011000063 predicted protein Pfam: Melibiase; glycoside hydrolase complement(5125250..5127346) Clostridium beijerinckii NCIMB 8052 5295596 YP_001311507.1 CDS Cbei_4442 NC_009617.1 5127556 5129769 R PFAM: glycoside hydrolase, clan GH-D; KEGG: cpe:CPE0374 alpha-galactosidase; glycoside hydrolase complement(5127556..5129769) Clostridium beijerinckii NCIMB 8052 5295597 YP_001311508.1 CDS Cbei_4443 NC_009617.1 5129828 5130658 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpe:CPE0373 probable suger ABC transporter; binding-protein-dependent transport system inner membrane protein complement(5129828..5130658) Clostridium beijerinckii NCIMB 8052 5295598 YP_001311509.1 CDS Cbei_4444 NC_009617.1 5130675 5131613 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpe:CPE0372 probable ABC transporter; binding-protein-dependent transport system inner membrane protein complement(5130675..5131613) Clostridium beijerinckii NCIMB 8052 5295599 YP_001311510.1 CDS Cbei_4445 NC_009617.1 5131669 5132961 R PFAM: extracellular solute-binding protein, family 1; KEGG: cpe:CPE0371 conserved hypothetical protein; extracellular solute-binding protein complement(5131669..5132961) Clostridium beijerinckii NCIMB 8052 5295600 YP_001311511.1 CDS Cbei_4446 NC_009617.1 5133411 5134271 D PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: cpe:CPE0370 probable transcriptional regulator; AraC family transcriptional regulator 5133411..5134271 Clostridium beijerinckii NCIMB 8052 5295601 YP_001311512.1 CDS Cbei_4447 NC_009617.1 5134475 5135308 R PFAM: DegV family protein; KEGG: cno:NT01CX_0895 DegV family protein; DegV family protein complement(5134475..5135308) Clostridium beijerinckii NCIMB 8052 5295602 YP_001311513.1 CDS Cbei_4448 NC_009617.1 5135793 5136989 R PFAM: inner-membrane translocator; KEGG: gka:GK1908 L-arabinose ABC transporter (permease); monosaccharide-transporting ATPase complement(5135793..5136989) Clostridium beijerinckii NCIMB 8052 5295603 YP_001311514.1 CDS Cbei_4449 NC_009617.1 5137002 5138537 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK1909 ABC transporter (ATP-binding protein); ABC transporter complement(5137002..5138537) Clostridium beijerinckii NCIMB 8052 5295604 YP_001311515.1 CDS Cbei_4450 NC_009617.1 5138608 5139747 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: gka:GK1910 ABC transporter (substrate-binding protein); monosaccharide-transporting ATPase complement(5138608..5139747) Clostridium beijerinckii NCIMB 8052 5295605 YP_001311516.1 CDS Cbei_4451 NC_009617.1 5139955 5140227 R hypothetical protein complement(5139955..5140227) Clostridium beijerinckii NCIMB 8052 5295606 YP_001311517.1 CDS Cbei_4452 NC_009617.1 5140888 5142495 R PFAM: carbohydrate kinase, FGGY; KEGG: bth:BT_0350 xylulose kinase (xylulokinase); carbohydrate kinase FGGY complement(5140888..5142495) Clostridium beijerinckii NCIMB 8052 5295607 YP_001311518.1 CDS Cbei_4453 NC_009617.1 5143103 5145094 R TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; KEGG: cac:CAC1348 transketolase, TKT; transketolase complement(5143103..5145094) Clostridium beijerinckii NCIMB 8052 5295608 YP_001311519.1 CDS Cbei_4454 NC_009617.1 5145749 5146396 R TIGRFAM: transaldolase; PFAM: Transaldolase; KEGG: lwe:lwe2691 transaldolase; transaldolase complement(5145749..5146396) Clostridium beijerinckii NCIMB 8052 5295609 YP_001311520.1 CDS sgaE NC_009617.1 5146635 5147321 R catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase complement(5146635..5147321) Clostridium beijerinckii NCIMB 8052 5295610 YP_001311521.1 CDS Cbei_4456 NC_009617.1 5147457 5148530 R PFAM: GntR family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: bld:BLi03256 transcriptional regulator, fragment 2; RBL05774; GntR family transcriptional regulator complement(5147457..5148530) Clostridium beijerinckii NCIMB 8052 5295611 YP_001311522.1 CDS Cbei_4457 NC_009617.1 5149093 5150562 D catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase 5149093..5150562 Clostridium beijerinckii NCIMB 8052 5295612 YP_001311523.1 CDS Cbei_4458 NC_009617.1 5150759 5152528 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; Cache domain protein; histidine kinase internal region; KEGG: bha:BH3447 two-component sensor histidine kinase; histidine kinase internal region complement(5150759..5152528) Clostridium beijerinckii NCIMB 8052 5295613 YP_001311524.1 CDS Cbei_4459 NC_009617.1 5152795 5153802 R PFAM: inner-membrane translocator; KEGG: aav:Aave_2249 inner-membrane translocator; monosaccharide-transporting ATPase complement(5152795..5153802) Clostridium beijerinckii NCIMB 8052 5295614 YP_001311525.1 CDS Cbei_4460 NC_009617.1 5153799 5154839 R PFAM: inner-membrane translocator; KEGG: aav:Aave_2250 inner-membrane translocator; monosaccharide-transporting ATPase complement(5153799..5154839) Clostridium beijerinckii NCIMB 8052 5295615 YP_001311526.1 CDS Cbei_4461 NC_009617.1 5154841 5156358 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: sde:Sde_0767 sugar uptake ABC transporter ATP-binding protein; ABC transporter complement(5154841..5156358) Clostridium beijerinckii NCIMB 8052 5295616 YP_001311527.1 CDS Cbei_4462 NC_009617.1 5156462 5157469 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: aav:Aave_2255 periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator complement(5156462..5157469) Clostridium beijerinckii NCIMB 8052 5295617 YP_001311528.1 CDS Cbei_4463 NC_009617.1 5157593 5158540 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: gfo:orf7 sugar-binding sensor histidine kinase/response regulator hybrid; periplasmic binding protein/LacI transcriptional regulator complement(5157593..5158540) Clostridium beijerinckii NCIMB 8052 5295618 YP_001311529.1 CDS Cbei_4464 NC_009617.1 5158542 5159744 R PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: gka:GK1911 two-component response regulator; response regulator receiver protein complement(5158542..5159744) Clostridium beijerinckii NCIMB 8052 5295619 YP_001311530.1 CDS Cbei_4465 NC_009617.1 5160082 5161137 D PFAM: Aldose 1-epimerase; KEGG: sus:Acid_1458 aldose 1-epimerase; aldose 1-epimerase 5160082..5161137 Clostridium beijerinckii NCIMB 8052 5295620 YP_001311531.1 CDS Cbei_4466 NC_009617.1 5162416 5164119 D PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cth:Cthe_0298 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5162416..5164119 Clostridium beijerinckii NCIMB 8052 5295621 YP_001311532.1 CDS Cbei_4467 NC_009617.1 5164286 5165152 R TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: efa:EF0947 hydrolase, haloacid dehalogenase-like family; cof family hydrolase complement(5164286..5165152) Clostridium beijerinckii NCIMB 8052 5295622 YP_001311533.1 CDS Cbei_4468 NC_009617.1 5165618 5166325 R PFAM: GntR family transcriptional regulator; UbiC transcription regulator-associated domain protein; KEGG: lga:LGAS_0188 transcriptional regulator; GntR family transcriptional regulator complement(5165618..5166325) Clostridium beijerinckii NCIMB 8052 5295623 YP_001311534.1 CDS Cbei_4469 NC_009617.1 5166932 5167876 R PFAM: cell wall binding repeat-containing protein; SCP-like extracellular; KEGG: cpe:CPE0570 hypothetical protein; SCP-like extracellular protein complement(5166932..5167876) Clostridium beijerinckii NCIMB 8052 5295624 YP_001311535.1 CDS Cbei_4470 NC_009617.1 5168314 5169006 D PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cno:NT01CX_1661 predicted metal-dependent phosphoesterase (PHP family); phosphotransferase domain-containing protein 5168314..5169006 Clostridium beijerinckii NCIMB 8052 5295625 YP_001311536.1 CDS Cbei_4471 NC_009617.1 5169100 5169357 R hypothetical protein complement(5169100..5169357) Clostridium beijerinckii NCIMB 8052 5295626 YP_001311537.1 CDS Cbei_4472 NC_009617.1 5169516 5170109 R TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: dsy:DSY0302 hypothetical protein; metal dependent phosphohydrolase complement(5169516..5170109) Clostridium beijerinckii NCIMB 8052 5295627 YP_001311538.1 CDS Cbei_4473 NC_009617.1 5170244 5170858 R PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: dsy:DSY0302 hypothetical protein; metal dependent phosphohydrolase complement(5170244..5170858) Clostridium beijerinckii NCIMB 8052 5295628 YP_001311539.1 CDS Cbei_4474 NC_009617.1 5171153 5173903 R TIGRFAM: ATPase P; calcium-translocating P-type ATPase, PMCA-type; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: cno:NT01CX_0593 calcium-translocating P-type ATPase, PMCA-type; calcium-translocating P-type ATPase complement(5171153..5173903) Clostridium beijerinckii NCIMB 8052 5295629 YP_001311540.1 CDS Cbei_4475 NC_009617.1 5174083 5175864 R TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cpf:CPF_1542 ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase RecQ complement(5174083..5175864) Clostridium beijerinckii NCIMB 8052 5295630 YP_001311541.1 CDS Cbei_4476 NC_009617.1 5176188 5177216 R PFAM: helix-turn-helix, Fis-type; sugar diacid recognition domain protein; KEGG: cac:CAC2833 uncharacterized conserved protein, YaeG family; transcriptional regulator CdaR complement(5176188..5177216) Clostridium beijerinckii NCIMB 8052 5295631 YP_001311542.1 CDS Cbei_4477 NC_009617.1 5177351 5177878 R KEGG: ppd:Ppro_3678 transposase and inactivated derivatives; transposase and inactivated derivatives complement(5177351..5177878) Clostridium beijerinckii NCIMB 8052 5295632 YP_001311543.1 CDS Cbei_4478 NC_009617.1 5177886 5178428 R KEGG: gka:GK0167 transposase of IS653-like element; hypothetical protein complement(5177886..5178428) Clostridium beijerinckii NCIMB 8052 5295633 YP_001311544.1 CDS Cbei_4479 NC_009617.1 5178800 5179942 R PFAM: glycerate kinase; KEGG: cac:CAC2834 glycerate kinase; glycerate kinase complement(5178800..5179942) Clostridium beijerinckii NCIMB 8052 5295634 YP_001311545.1 CDS Cbei_4480 NC_009617.1 5180012 5181298 R PFAM: Gluconate transporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: cac:CAC2835 gluconate permease, GntP; gluconate transporter complement(5180012..5181298) Clostridium beijerinckii NCIMB 8052 5295635 YP_001311546.1 CDS Cbei_4481 NC_009617.1 5181755 5184289 R PFAM: beta-lactamase domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rubredoxin-type Fe(Cys)4 protein; flavodoxin/nitric oxide synthase; KEGG: cpe:CPE1014 probable flavoprotein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(5181755..5184289) Clostridium beijerinckii NCIMB 8052 5295636 YP_001311547.1 CDS uvsE NC_009617.1 5184402 5185655 R PFAM: UV-endonuclease UvdE; KEGG: cno:NT01CX_0232 UV DNA damage endonuclease (UV-endonuclease) UvdE; UV damage endonuclease complement(5184402..5185655) Clostridium beijerinckii NCIMB 8052 5295637 YP_001311548.1 CDS Cbei_4483 NC_009617.1 5185954 5187177 R PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: cpf:CPF_1269 rubredoxin/flavodoxin/oxidoreductase; beta-lactamase domain-containing protein complement(5185954..5187177) Clostridium beijerinckii NCIMB 8052 5295638 YP_001311549.1 CDS Cbei_4484 NC_009617.1 5187410 5189116 R KEGG: cno:NT01CX_0224 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase complement(5187410..5189116) Clostridium beijerinckii NCIMB 8052 5295639 YP_001311550.1 CDS Cbei_4485 NC_009617.1 5189190 5191139 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; SMART: PAS domain containing protein; KEGG: ana:alr4716 two-component sensor histidine kinase; multi-sensor signal transduction histidine kinase complement(5189190..5191139) Clostridium beijerinckii NCIMB 8052 5295640 YP_001311551.1 CDS Cbei_4486 NC_009617.1 5191150 5192427 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rfr:Rfer_0125 periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator complement(5191150..5192427) Clostridium beijerinckii NCIMB 8052 5295641 YP_001311552.1 CDS Cbei_4487 NC_009617.1 5192682 5193311 R TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; KEGG: ctc:CTC01751 thiamin-phosphate pyrophosphorylase; thiamine-phosphate pyrophosphorylase complement(5192682..5193311) Clostridium beijerinckii NCIMB 8052 5295642 YP_001311553.1 CDS Cbei_4488 NC_009617.1 5193404 5194234 R catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase complement(5193404..5194234) Clostridium beijerinckii NCIMB 8052 5295643 YP_001311554.1 CDS Cbei_4489 NC_009617.1 5194441 5195751 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(5194441..5195751) Clostridium beijerinckii NCIMB 8052 5295644 YP_001311555.1 CDS Cbei_4490 NC_009617.1 5195822 5196628 R TIGRFAM: phosphomethylpyrimidine kinase; PFAM: protein of unknown function UPF0031; Phosphomethylpyrimidine kinase type-1; KEGG: cpe:CPE1338 phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase complement(5195822..5196628) Clostridium beijerinckii NCIMB 8052 5295645 YP_001311556.1 CDS Cbei_4491 NC_009617.1 5196659 5197198 R TIGRFAM: thiW protein; KEGG: ctc:CTC01754 hypothetical protein; thiW protein complement(5196659..5197198) Clostridium beijerinckii NCIMB 8052 5295646 YP_001311557.1 CDS Cbei_4492 NC_009617.1 5197564 5198808 R PFAM: FMN-binding domain protein; KEGG: cac:CAC2762 polyferredoxin; FMN-binding domain-containing protein complement(5197564..5198808) Clostridium beijerinckii NCIMB 8052 5295647 YP_001311558.1 CDS Cbei_4493 NC_009617.1 5199237 5199359 R hypothetical protein complement(5199237..5199359) Clostridium beijerinckii NCIMB 8052 5295648 YP_001311559.1 CDS Cbei_4494 NC_009617.1 5199572 5200240 R PFAM: ApbE family lipoprotein; KEGG: ctc:CTC01027 thiamine biosynthesis lipoprotein apbE precursor; ApbE family lipoprotein complement(5199572..5200240) Clostridium beijerinckii NCIMB 8052 5295649 YP_001311560.1 CDS Cbei_4495 NC_009617.1 5200525 5202081 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cac:CAC2760 membrane-associated sensory histidine kinase with HAMP domain; integral membrane sensor signal transduction histidine kinase complement(5200525..5202081) Clostridium beijerinckii NCIMB 8052 5295650 YP_001311561.1 CDS Cbei_4496 NC_009617.1 5202078 5202767 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cac:CAC2759 response regulator (CheY receiver domain and HTH-type DNA-binding domain); two component transcriptional regulator complement(5202078..5202767) Clostridium beijerinckii NCIMB 8052 5295651 YP_001311562.1 CDS Cbei_4497 NC_009617.1 5203187 5203471 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: mba:Mbar_A1381 hypothetical protein; antibiotic biosynthesis monooxygenase 5203187..5203471 Clostridium beijerinckii NCIMB 8052 5295652 YP_001311563.1 CDS Cbei_4498 NC_009617.1 5203926 5204804 R TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit; PFAM: serine dehydratase alpha chain; KEGG: cpr:CPR_2643 L-serine dehydratase, iron-sulfur-dependent, alpha subunit; L-serine dehydratase, iron-sulfur-dependent subunit alpha complement(5203926..5204804) Clostridium beijerinckii NCIMB 8052 5295653 YP_001311564.1 CDS Cbei_4499 NC_009617.1 5204806 5205486 R TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; PFAM: amino acid-binding ACT domain protein; serine dehydratase beta chain; KEGG: cpr:CPR_2642 L-serine dehydratase, iron-sulfur-dependent, beta subunit; L-serine dehydratase, iron-sulfur-dependent subunit beta complement(5204806..5205486) Clostridium beijerinckii NCIMB 8052 5295654 YP_001311565.1 CDS Cbei_4500 NC_009617.1 5205760 5206497 R PFAM: esterase; KEGG: cac:CAC1962 predicted esterase of alpha/beta hydrolase superfamily, YbbA B.subtilis ortholog; esterase complement(5205760..5206497) Clostridium beijerinckii NCIMB 8052 5295655 YP_001311566.1 CDS Cbei_4501 NC_009617.1 5206504 5207307 R PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: bcz:BCZK2976 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein complement(5206504..5207307) Clostridium beijerinckii NCIMB 8052 5295656 YP_001311567.1 CDS Cbei_4502 NC_009617.1 5207491 5208585 D PFAM: transport system permease; KEGG: ctc:CTC00961 iron(III) dicitrate transport system permease fecD; transport system permease 5207491..5208585 Clostridium beijerinckii NCIMB 8052 5295657 YP_001311568.1 CDS Cbei_4503 NC_009617.1 5208595 5209386 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_1424 iron(III) ABC transporter ATP-binding protein; ABC transporter 5208595..5209386 Clostridium beijerinckii NCIMB 8052 5295658 YP_001311569.1 CDS Cbei_4504 NC_009617.1 5209446 5210486 D PFAM: periplasmic binding protein; KEGG: ssa:SSA_1581 metal-binding ABC transporter (probably hemin); periplasmic binding protein 5209446..5210486 Clostridium beijerinckii NCIMB 8052 5295659 YP_001311570.1 CDS Cbei_4505 NC_009617.1 5210606 5212279 D PFAM: cell wall binding repeat-containing protein; KEGG: cpe:CPE0570 hypothetical protein; cell wall binding repeat-containing protein 5210606..5212279 Clostridium beijerinckii NCIMB 8052 5295660 YP_001311571.1 CDS Cbei_4506 NC_009617.1 5212615 5212968 R PFAM: protein of unknown function DUF1667; KEGG: cac:CAC1324 uncharacterized predected metal-binding protein; hypothetical protein complement(5212615..5212968) Clostridium beijerinckii NCIMB 8052 5295661 YP_001311572.1 CDS Cbei_4507 NC_009617.1 5212970 5214223 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cac:CAC1323 NAD(FAD)-dependent dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(5212970..5214223) Clostridium beijerinckii NCIMB 8052 5295662 YP_001311573.1 CDS Cbei_4508 NC_009617.1 5214241 5215668 R PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: cac:CAC1322 glycerol-3-phosphate dehydrogenase, GLPA; FAD dependent oxidoreductase complement(5214241..5215668) Clostridium beijerinckii NCIMB 8052 5295663 YP_001311574.1 CDS glpK NC_009617.1 5216000 5217499 R Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase complement(5216000..5217499) Clostridium beijerinckii NCIMB 8052 5295664 YP_001311575.1 CDS Cbei_4510 NC_009617.1 5217792 5218349 R PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: cac:CAC1320 glycerol-3-phosphate responsive antiterminator (mRNA-binding), GLPP; glycerol-3-phosphate responsive antiterminator complement(5217792..5218349) Clostridium beijerinckii NCIMB 8052 5295665 YP_001311576.1 CDS Cbei_4511 NC_009617.1 5218435 5219148 R TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: cac:CAC1319 glycerol uptake facilitator protein, GLPF; MIP family channel protein complement(5218435..5219148) Clostridium beijerinckii NCIMB 8052 5295666 YP_001311577.1 CDS Cbei_4512 NC_009617.1 5219796 5221451 R PFAM: phosphoribulokinase/uridine kinase; KEGG: cac:CAC0672 fision threonyl-tRNA synthetase (N-terminal part) and uridine kinase; phosphoribulokinase/uridine kinase complement(5219796..5221451) Clostridium beijerinckii NCIMB 8052 5295667 YP_001311578.1 CDS Cbei_4513 NC_009617.1 5221845 5222543 D PFAM: protein of unknown function DUF421; KEGG: cac:CAC0671 ortholog YrbG, YetE, YkjA, YdfS, YdfR B.subtilis; hypothetical protein 5221845..5222543 Clostridium beijerinckii NCIMB 8052 5295668 YP_001311579.1 CDS Cbei_4514 NC_009617.1 5222540 5222920 D KEGG: cpf:CPF_1556 hypothetical protein; hypothetical protein 5222540..5222920 Clostridium beijerinckii NCIMB 8052 5295669 YP_001311580.1 CDS Cbei_4515 NC_009617.1 5223264 5224487 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 5223264..5224487 Clostridium beijerinckii NCIMB 8052 5295670 YP_001311581.1 CDS Cbei_4516 NC_009617.1 5224487 5225872 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 5224487..5225872 Clostridium beijerinckii NCIMB 8052 5295671 YP_001311582.1 CDS argC NC_009617.1 5226199 5227233 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 5226199..5227233 Clostridium beijerinckii NCIMB 8052 5295672 YP_001311583.1 CDS Cbei_4518 NC_009617.1 5227289 5228554 D TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; KEGG: tte:TTE2497 predicted kinase related to thiamine pyrophosphokinase; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 5227289..5228554 Clostridium beijerinckii NCIMB 8052 5295673 YP_001311584.1 CDS Cbei_4519 NC_009617.1 5228651 5229508 D catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 5228651..5229508 Clostridium beijerinckii NCIMB 8052 5295674 YP_001311585.1 CDS Cbei_4520 NC_009617.1 5229623 5230804 D TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: hdu:HD0892 acetylornithine aminotransferase; acetylornithine and succinylornithine aminotransferase 5229623..5230804 Clostridium beijerinckii NCIMB 8052 5295675 YP_001311586.1 CDS Cbei_4521 NC_009617.1 5230900 5231820 D TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; KEGG: cth:Cthe_1869 ornithine carbamoyltransferase; ornithine carbamoyltransferase 5230900..5231820 Clostridium beijerinckii NCIMB 8052 5295676 YP_001311587.1 CDS Cbei_4522 NC_009617.1 5232163 5233263 D PFAM: Excinuclease ABC, C subunit domain protein; UvrB/UvrC protein; KEGG: cac:CAC3468 excinuclease ABC, subunit C (UvrC); excinuclease ABC subunit C 5232163..5233263 Clostridium beijerinckii NCIMB 8052 5295677 YP_001311588.1 CDS Cbei_4523 NC_009617.1 5233367 5233897 D PFAM: nitroreductase; KEGG: ldb:Ldb1039 hypothetical protein; nitroreductase 5233367..5233897 Clostridium beijerinckii NCIMB 8052 5295678 YP_001311589.1 CDS Cbei_4524 NC_009617.1 5233986 5234612 D PFAM: NADPH-dependent FMN reductase; KEGG: cac:CAC3341 multimeric flavodoxin WrbA family protein; NADPH-dependent FMN reductase 5233986..5234612 Clostridium beijerinckii NCIMB 8052 5295679 YP_001311590.1 CDS Cbei_4525 NC_009617.1 5234835 5236205 R PFAM: glycoside hydrolase, family 1; KEGG: gka:GK2337 beta-glucosidase; glycoside hydrolase complement(5234835..5236205) Clostridium beijerinckii NCIMB 8052 5295680 YP_001311591.1 CDS Cbei_4526 NC_009617.1 5236364 5237053 D PFAM: GntR family transcriptional regulator; UbiC transcription regulator-associated domain protein; KEGG: cpr:CPR_0527 trehalose operon transcriptional repressor; GntR family transcriptional regulator 5236364..5237053 Clostridium beijerinckii NCIMB 8052 5295681 YP_001311592.1 CDS Cbei_4527 NC_009617.1 5237280 5238755 R PFAM: amino acid permease-associated region; KEGG: bce:BC3724 GABA-specific permease; amino acid permease-associated protein complement(5237280..5238755) Clostridium beijerinckii NCIMB 8052 5295682 YP_001311593.1 CDS Cbei_4528 NC_009617.1 5239034 5240353 R PFAM: major facilitator superfamily MFS_1; KEGG: bld:BLi04069 galactonate transporter; RBL01028; major facilitator superfamily transporter complement(5239034..5240353) Clostridium beijerinckii NCIMB 8052 5295683 YP_001311594.1 CDS Cbei_4529 NC_009617.1 5240569 5242806 R KEGG: ppe:PEPE_0550 pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulfide oxidoreductase complement(5240569..5242806) Clostridium beijerinckii NCIMB 8052 5295684 YP_001311595.1 CDS Cbei_4530 NC_009617.1 5243220 5244002 D PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: ppe:PEPE_0549 AraC family transcriptional regulator (HTH and ligand binding domain); helix-turn-helix domain-containing protein 5243220..5244002 Clostridium beijerinckii NCIMB 8052 5295685 YP_001311596.1 CDS Cbei_4531 NC_009617.1 5244172 5245209 R KEGG: cpe:CPE1351 hypothetical protein; hypothetical protein complement(5244172..5245209) Clostridium beijerinckii NCIMB 8052 5295686 YP_001311597.1 CDS Cbei_4532 NC_009617.1 5245413 5246849 R TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: cpf:CPF_1070 PTS system, N-acetylglucosamine-specific IIBC component; PTS system N-acetylglucosamine-specific transporter subunit IIBC complement(5245413..5246849) Clostridium beijerinckii NCIMB 8052 5295687 YP_001311598.1 CDS Cbei_4533 NC_009617.1 5247258 5247755 D TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease, EIIA 1 domain; KEGG: cpf:CPF_0070 PTS system, N-acetylglucosamine-specific IIA component; PTS system glucose subfamily transporter subunit IIA 5247258..5247755 Clostridium beijerinckii NCIMB 8052 5295688 YP_001311599.1 CDS Cbei_4534 NC_009617.1 5247802 5248656 R PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: cac:CAC1355 transcriptional antiterminator (BglG family); transcriptional antiterminator BglG complement(5247802..5248656) Clostridium beijerinckii NCIMB 8052 5295689 YP_001311600.1 CDS Cbei_4535 NC_009617.1 5249093 5250379 R TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system, EIIC; KEGG: lin:lin2832 similar to cellobiose phosphotransferase enzyme IIC component; PTS system lactose/cellobiose family transporter subunit IIC complement(5249093..5250379) Clostridium beijerinckii NCIMB 8052 5295690 YP_001311601.1 CDS Cbei_4536 NC_009617.1 5250465 5251367 R PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: bcz:BCZK2215 possible ATPase family protein; BadF/BadG/BcrA/BcrD type ATPase complement(5250465..5251367) Clostridium beijerinckii NCIMB 8052 5295691 YP_001311602.1 CDS Cbei_4537 NC_009617.1 5251413 5251724 R PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: cpe:CPE2577 PTS system, cellobiose-specific II component; PTS system lactose/cellobiose-specific transporter subunit IIA complement(5251413..5251724) Clostridium beijerinckii NCIMB 8052 5295692 YP_001311603.1 CDS Cbei_4538 NC_009617.1 5251745 5252056 R PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: lwe:lwe2632 PTS system, beta-glucoside-specific, IIB component; phosphotransferase system, lactose/cellobiose-specific IIB subunit complement(5251745..5252056) Clostridium beijerinckii NCIMB 8052 5295693 YP_001311604.1 CDS Cbei_4539 NC_009617.1 5252248 5254998 R PFAM: sigma-54 factor, interaction domain-containing protein; PTS system fructose subfamily IIA component; PRD domain protein; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; KEGG: lmo:lmo1721 hypothetical protein; sigma-54 factor interaction domain-containing protein complement(5252248..5254998) Clostridium beijerinckii NCIMB 8052 5295694 YP_001311605.1 CDS Cbei_4540 NC_009617.1 5255404 5255964 D PFAM: adenylate cyclase; KEGG: cpf:CPF_1559 adenylate cyclase; adenylate cyclase 5255404..5255964 Clostridium beijerinckii NCIMB 8052 5295695 YP_001311606.1 CDS Cbei_4541 NC_009617.1 5256114 5258075 D PFAM: fructose-1,6-bisphosphatase; KEGG: cac:CAC1572 fructose-1,6-bisphosphatase; fructose-1,6-bisphosphatase 5256114..5258075 Clostridium beijerinckii NCIMB 8052 5295696 YP_001311607.1 CDS Cbei_4542 NC_009617.1 5258380 5259519 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: cpe:CPE0097 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(5258380..5259519) Clostridium beijerinckii NCIMB 8052 5295697 YP_001311608.1 CDS Cbei_4543 NC_009617.1 5259629 5261182 R PFAM: coenzyme A transferase; KEGG: cpe:CPE0096 propionate CoA-transferase; coenzyme A transferase complement(5259629..5261182) Clostridium beijerinckii NCIMB 8052 5295698 YP_001311609.1 CDS Cbei_4544 NC_009617.1 5261233 5262009 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cpe:CPE0095 crotonase; enoyl-CoA hydratase/isomerase complement(5261233..5262009) Clostridium beijerinckii NCIMB 8052 5295699 YP_001311610.1 CDS Cbei_4545 NC_009617.1 5262301 5263731 R TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bld:BLi00603 YdjK; sugar transporter complement(5262301..5263731) Clostridium beijerinckii NCIMB 8052 5295700 YP_001311611.1 CDS Cbei_4546 NC_009617.1 5263986 5264882 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: cpf:CPF_0086 myo-inositol catabolism protein IolE; xylose isomerase domain-containing protein complement(5263986..5264882) Clostridium beijerinckii NCIMB 8052 5295701 YP_001311612.1 CDS Cbei_4547 NC_009617.1 5264902 5265915 R PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: ctc:CTC00511 myo-inositol 2-dehydrogenase; oxidoreductase domain-containing protein complement(5264902..5265915) Clostridium beijerinckii NCIMB 8052 5295702 YP_001311613.1 CDS Cbei_4548 NC_009617.1 5265930 5267861 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein, central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: cpe:CPE0089 myo-inositol catabolism protein; thiamine pyrophosphate protein, central region complement(5265930..5267861) Clostridium beijerinckii NCIMB 8052 5295703 YP_001311614.1 CDS Cbei_4549 NC_009617.1 5267876 5268664 R PFAM: Myo-inositol catabolism IolB domain protein; KEGG: ctc:CTC00509 myo-inositol catabolism protein iolB; myo-inositol catabolism IolB domain-containing protein complement(5267876..5268664) Clostridium beijerinckii NCIMB 8052 5295704 YP_001311615.1 CDS Cbei_4550 NC_009617.1 5268679 5269698 R PFAM: PfkB domain protein; KEGG: cpf:CPF_0082 myo-inositol catabolism protein IolC; ribokinase-like domain-containing protein complement(5268679..5269698) Clostridium beijerinckii NCIMB 8052 5295705 YP_001311616.1 CDS Cbei_4551 NC_009617.1 5269699 5270556 R catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase complement(5269699..5270556) Clostridium beijerinckii NCIMB 8052 5295706 YP_001311617.1 CDS Cbei_4552 NC_009617.1 5270562 5271716 R PFAM: iron-containing alcohol dehydrogenase; KEGG: cpf:CPF_0080 alcohol dehydrogenase, iron-containing; iron-containing alcohol dehydrogenase complement(5270562..5271716) Clostridium beijerinckii NCIMB 8052 5295707 YP_001311618.1 CDS Cbei_4553 NC_009617.1 5271954 5272721 D PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: cpe:CPE0084 transcription repressor of myo-inositol catabolism operon; DeoR family transcriptional regulator 5271954..5272721 Clostridium beijerinckii NCIMB 8052 5295708 YP_001311619.1 CDS Cbei_4554 NC_009617.1 5272906 5273535 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ste:STER_0426 predicted sugar phosphatase of HAD family; HAD family hydrolase complement(5272906..5273535) Clostridium beijerinckii NCIMB 8052 5295709 YP_001311620.1 CDS Cbei_4555 NC_009617.1 5273552 5276299 R PFAM: sigma-54 factor, interaction domain-containing protein; PTS system fructose subfamily IIA component; PRD domain protein; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; KEGG: stm:STM4534 transcriptional regulator; sigma-54 factor interaction domain-containing protein complement(5273552..5276299) Clostridium beijerinckii NCIMB 8052 5295710 YP_001311621.1 CDS Cbei_4556 NC_009617.1 5276617 5277585 R PFAM: sugar isomerase (SIS); KEGG: stm:STM3601 phosphosugar isomerase; sugar isomerase (SIS) complement(5276617..5277585) Clostridium beijerinckii NCIMB 8052 5295711 YP_001311622.1 CDS Cbei_4557 NC_009617.1 5277649 5278473 R PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: ppe:PEPE_0198 mannose-specific PTS system component IID; PTS system mannose/fructose/sorbose family transporter subunit IID complement(5277649..5278473) Clostridium beijerinckii NCIMB 8052 5295712 YP_001311623.1 CDS Cbei_4558 NC_009617.1 5278488 5279252 R PFAM: phosphotransferase system PTS, sorbose-specific IIC subunit; KEGG: ppe:PEPE_0197 mannose-specific PTS system component IIC; PTS system sorbose-specific transporter subunit IIC complement(5278488..5279252) Clostridium beijerinckii NCIMB 8052 5295713 YP_001311624.1 CDS Cbei_4559 NC_009617.1 5279268 5279738 R PFAM: PTS system sorbose subfamily IIB component; KEGG: stm:STM0576 PTS system, mannose-specific II component; PTS system sorbose subfamily transporter subunit IIB complement(5279268..5279738) Clostridium beijerinckii NCIMB 8052 5295714 YP_001311625.1 CDS Cbei_4560 NC_009617.1 5279735 5280157 R PFAM: PTS system fructose subfamily IIA component; KEGG: fnu:FN0632 PTS system, IIA component; PTS system fructose subfamily transporter subunit IIA complement(5279735..5280157) Clostridium beijerinckii NCIMB 8052 5295715 YP_001311626.1 CDS Cbei_4561 NC_009617.1 5280441 5281151 R PFAM: GntR family transcriptional regulator; UbiC transcription regulator-associated domain protein; KEGG: gka:GK1855 transcriptional regulator (GntR family); GntR family transcriptional regulator complement(5280441..5281151) Clostridium beijerinckii NCIMB 8052 5295716 YP_001311627.1 CDS Cbei_4562 NC_009617.1 5281548 5282276 R TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: tte:TTE1023 6-phosphogluconolactonase/Glucosamine-6- phosphate isomerase/deaminase; glucosamine-6-phosphate isomerase complement(5281548..5282276) Clostridium beijerinckii NCIMB 8052 5295717 YP_001311628.1 CDS Cbei_4563 NC_009617.1 5282298 5283023 R PFAM: GntR family transcriptional regulator; UbiC transcription regulator-associated domain protein; KEGG: cpr:CPR_2646 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(5282298..5283023) Clostridium beijerinckii NCIMB 8052 5295718 YP_001311629.1 CDS Cbei_4564 NC_009617.1 5283331 5284467 D TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; KEGG: cpf:CPF_2434 N-acetylglucosamine-6-phosphate deacetylase; N-acetylglucosamine-6-phosphate deacetylase 5283331..5284467 Clostridium beijerinckii NCIMB 8052 5295719 YP_001311630.1 CDS Cbei_4565 NC_009617.1 5284705 5285613 R PFAM: ROK family protein; KEGG: gka:GK0217 transcriptional regulator; ROK family protein complement(5284705..5285613) Clostridium beijerinckii NCIMB 8052 5295720 YP_001311631.1 CDS Cbei_4566 NC_009617.1 5285721 5287118 R PFAM: glycoside hydrolase, family 1; KEGG: cpf:CPF_2609 glycosyl hydrolase, family 1; beta-glucosidase complement(5285721..5287118) Clostridium beijerinckii NCIMB 8052 5295721 YP_001311632.1 CDS Cbei_4567 NC_009617.1 5287202 5287978 R PFAM: ROK family protein; KEGG: bha:BH0797 glucose kinase; ROK family protein complement(5287202..5287978) Clostridium beijerinckii NCIMB 8052 5295722 YP_001311633.1 CDS Cbei_4568 NC_009617.1 5288329 5289162 R PFAM: Prephenate dehydrogenase; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: cno:NT01CX_0626 prephenate dehydrogenase; prephenate dehydrogenase complement(5288329..5289162) Clostridium beijerinckii NCIMB 8052 5295723 YP_001311634.1 CDS Cbei_4569 NC_009617.1 5289186 5290199 R catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase complement(5289186..5290199) Clostridium beijerinckii NCIMB 8052 5295724 YP_001311635.1 CDS Cbei_4570 NC_009617.1 5290351 5290791 R catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase complement(5290351..5290791) Clostridium beijerinckii NCIMB 8052 5295725 YP_001311636.1 CDS Cbei_4571 NC_009617.1 5291039 5291548 R PFAM: shikimate kinase; KEGG: cno:NT01CX_0620 shikimate kinase; shikimate kinase complement(5291039..5291548) Clostridium beijerinckii NCIMB 8052 5295726 YP_001311637.1 CDS Cbei_4572 NC_009617.1 5291558 5292370 R TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding, N-terminal domain protein; KEGG: cpf:CPF_0693 shikimate 5-dehydrogenase; shikimate 5-dehydrogenase complement(5291558..5292370) Clostridium beijerinckii NCIMB 8052 5295727 YP_001311638.1 CDS Cbei_4573 NC_009617.1 5292385 5293524 R TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: det:DET0461 chorismate mutase / prephenate dehydratase; chorismate mutase complement(5292385..5293524) Clostridium beijerinckii NCIMB 8052 5295728 YP_001311639.1 CDS Cbei_4574 NC_009617.1 5293674 5294747 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(5293674..5294747) Clostridium beijerinckii NCIMB 8052 5295729 YP_001311640.1 CDS Cbei_4575 NC_009617.1 5294725 5296032 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(5294725..5296032) Clostridium beijerinckii NCIMB 8052 5295730 YP_001311641.1 CDS aroB NC_009617.1 5296119 5297171 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(5296119..5297171) Clostridium beijerinckii NCIMB 8052 5295731 YP_001311642.1 CDS Cbei_4577 NC_009617.1 5297299 5298312 R catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase complement(5297299..5298312) Clostridium beijerinckii NCIMB 8052 5295732 YP_001311643.1 CDS Cbei_4578 NC_009617.1 5299256 5299972 D essential for production of a quorum sensing autoinducing peptide; accessory gene regulator protein 5299256..5299972 Clostridium beijerinckii NCIMB 8052 5295733 YP_001311644.1 CDS Cbei_4579 NC_009617.1 5300673 5301992 D KEGG: lin:lin0043 similar to sensor histidine kinase (AgrC from Staphylococcus); sensor histidine kinase-like protein 5300673..5301992 Clostridium beijerinckii NCIMB 8052 5295734 YP_001311645.1 CDS Cbei_4580 NC_009617.1 5302002 5302733 D PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: cac:CAC0081 accessory gene regulator protein A; LytTR family two component transcriptional regulator 5302002..5302733 Clostridium beijerinckii NCIMB 8052 5295735 YP_001311646.1 CDS Cbei_4582 NC_009617.1 5304467 5306089 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: tte:TTE2354 ABC-type multidrug/protein/lipid transport system, ATPase component; ABC transporter complement(5304467..5306089) Clostridium beijerinckii NCIMB 8052 5296438 YP_001311647.1 CDS Cbei_4583 NC_009617.1 5306101 5307531 R KEGG: cpe:CPE0306 ABC-2 type transport system permease; hypothetical protein complement(5306101..5307531) Clostridium beijerinckii NCIMB 8052 5295737 YP_001311648.1 CDS Cbei_4584 NC_009617.1 5307647 5308393 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ctc:CTC00240 ABC transporter ATP-binding protein; ABC transporter complement(5307647..5308393) Clostridium beijerinckii NCIMB 8052 5295738 YP_001311649.1 CDS Cbei_4585 NC_009617.1 5308416 5309132 R PFAM: NADPH-dependent FMN reductase; KEGG: spd:SPD_1750 multimeric flavodoxin WrbA (general function prediction only); NADPH-dependent FMN reductase complement(5308416..5309132) Clostridium beijerinckii NCIMB 8052 5295739 YP_001311650.1 CDS Cbei_4586 NC_009617.1 5309166 5312135 R KEGG: efa:EF0527 CylM protein; lantibiotic modifying -like protein complement(5309166..5312135) Clostridium beijerinckii NCIMB 8052 5295740 YP_001311651.1 CDS Cbei_4587 NC_009617.1 5312234 5312395 R hypothetical protein complement(5312234..5312395) Clostridium beijerinckii NCIMB 8052 5295741 YP_001311652.1 CDS Cbei_4588 NC_009617.1 5312697 5313857 R PFAM: proton/sugar symporter, LacY; major facilitator superfamily MFS_1; KEGG: oih:OB0724 hypothetical protein; major facilitator superfamily transporter complement(5312697..5313857) Clostridium beijerinckii NCIMB 8052 5295742 YP_001311653.1 CDS Cbei_4589 NC_009617.1 5314122 5315555 R PFAM: phospholipase D/Transphosphatidylase; KEGG: cpr:CPR_1418 cardiolipin synthetase; phospholipase D/transphosphatidylase complement(5314122..5315555) Clostridium beijerinckii NCIMB 8052 5295743 YP_001311654.1 CDS leuS NC_009617.1 5316208 5318658 D leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 5316208..5318658 Clostridium beijerinckii NCIMB 8052 5295744 YP_001311655.1 CDS Cbei_4591 NC_009617.1 5318876 5319562 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dsy:DSY3866 hypothetical protein; two component transcriptional regulator complement(5318876..5319562) Clostridium beijerinckii NCIMB 8052 5295745 YP_001311656.1 CDS Cbei_4592 NC_009617.1 5319719 5320954 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: dsy:DSY3867 hypothetical protein; integral membrane sensor signal transduction histidine kinase complement(5319719..5320954) Clostridium beijerinckii NCIMB 8052 5295746 YP_001311657.1 CDS Cbei_4593 NC_009617.1 5321396 5322073 R hypothetical protein complement(5321396..5322073) Clostridium beijerinckii NCIMB 8052 5295747 YP_001311658.1 CDS Cbei_4594 NC_009617.1 5322287 5323231 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: cno:NT01CX_0601 D-isomer specific 2-hydroxyacid dehydrogenases; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit complement(5322287..5323231) Clostridium beijerinckii NCIMB 8052 5295748 YP_001311659.1 CDS dcd NC_009617.1 5323754 5324275 R Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase complement(5323754..5324275) Clostridium beijerinckii NCIMB 8052 5295749 YP_001311660.1 CDS Cbei_4596 NC_009617.1 5324391 5325134 R KEGG: cpe:CPE0665 hypothetical protein; hypothetical protein complement(5324391..5325134) Clostridium beijerinckii NCIMB 8052 5295750 YP_001311661.1 CDS Cbei_4597 NC_009617.1 5325387 5325716 D TIGRFAM: HesB-related (seleno)protein; KEGG: cpr:CPR_0641 HesB-related selenoprotein; HesB-like (seleno)protein 5325387..5325716 Clostridium beijerinckii NCIMB 8052 5295751 YP_001311662.1 CDS Cbei_4598 NC_009617.1 5325843 5326514 R hypothetical protein complement(5325843..5326514) Clostridium beijerinckii NCIMB 8052 5295752 YP_001311663.1 CDS Cbei_4599 NC_009617.1 5326594 5327928 R KEGG: cpe:CPE0657 hypothetical protein; hypothetical protein complement(5326594..5327928) Clostridium beijerinckii NCIMB 8052 5295753 YP_001311664.1 CDS Cbei_4600 NC_009617.1 5327984 5329072 R PFAM: ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; KEGG: cpr:CPR_0623 hypothetical protein; ATPase complement(5327984..5329072) Clostridium beijerinckii NCIMB 8052 5295754 YP_001311665.1 CDS Cbei_4601 NC_009617.1 5329090 5329869 R KEGG: cpr:CPR_0622 hypothetical protein; hypothetical protein complement(5329090..5329869) Clostridium beijerinckii NCIMB 8052 5295755 YP_001311666.1 CDS Cbei_4602 NC_009617.1 5330402 5331235 R PFAM: RelA/SpoT domain protein; KEGG: cpr:CPR_0621 RelA/SpoT family protein; RelA/SpoT domain-containing protein complement(5330402..5331235) Clostridium beijerinckii NCIMB 8052 5295756 YP_001311667.1 CDS Cbei_4603 NC_009617.1 5331397 5332077 D KEGG: cno:NT01CX_1368 hypothetical protein; hypothetical protein 5331397..5332077 Clostridium beijerinckii NCIMB 8052 5295757 YP_001311668.1 CDS Cbei_4604 NC_009617.1 5332117 5333070 D PFAM: chemotaxis sensory transducer; KEGG: cac:CAC0443 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 5332117..5333070 Clostridium beijerinckii NCIMB 8052 5295758 YP_001311669.1 CDS Cbei_4605 NC_009617.1 5333160 5334038 R PFAM: Aldose 1-epimerase; KEGG: cpf:CPF_0279 aldose 1-epimerase; aldose 1-epimerase complement(5333160..5334038) Clostridium beijerinckii NCIMB 8052 5295759 YP_001311670.1 CDS Cbei_4606 NC_009617.1 5334220 5334909 R PFAM: metallophosphoesterase; KEGG: cpr:CPR_0620 Ser/Thr protein phosphatase family protein; metallophosphoesterase complement(5334220..5334909) Clostridium beijerinckii NCIMB 8052 5295760 YP_001311671.1 CDS Cbei_4607 NC_009617.1 5334937 5335197 R KEGG: cno:NT01CX_1366 flagella-associated protein; flagella-associated protein complement(5334937..5335197) Clostridium beijerinckii NCIMB 8052 5295761 YP_001311672.1 CDS Cbei_4608 NC_009617.1 5335339 5337222 R KEGG: cac:CAC0638 hypothetical protein; hypothetical protein complement(5335339..5337222) Clostridium beijerinckii NCIMB 8052 5295762 YP_001311673.1 CDS Cbei_4609 NC_009617.1 5337504 5338574 R catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase complement(5337504..5338574) Clostridium beijerinckii NCIMB 8052 5295763 YP_001311674.1 CDS Cbei_4610 NC_009617.1 5339007 5339234 R KEGG: cac:CAC1487 uncharacterized protein, similar to TlpA of B.subtilis; small acid-soluble spore protein Tlp complement(5339007..5339234) Clostridium beijerinckii NCIMB 8052 5295764 YP_001311675.1 CDS Cbei_4611 NC_009617.1 5339430 5339618 D hypothetical protein 5339430..5339618 Clostridium beijerinckii NCIMB 8052 5295765 YP_001311676.1 CDS Cbei_4612 NC_009617.1 5339655 5339930 D PFAM: Coat F domain protein; KEGG: cac:CAC2780 spore coat protein, CotF related; coat F domain-containing protein 5339655..5339930 Clostridium beijerinckii NCIMB 8052 5295766 YP_001311677.1 CDS Cbei_4613 NC_009617.1 5339979 5340215 D hypothetical protein 5339979..5340215 Clostridium beijerinckii NCIMB 8052 5295767 YP_001311678.1 CDS Cbei_4614 NC_009617.1 5340234 5340524 D PFAM: Coat F domain protein; KEGG: cac:CAC2780 spore coat protein, CotF related; coat F domain-containing protein 5340234..5340524 Clostridium beijerinckii NCIMB 8052 5295768 YP_001311679.1 CDS Cbei_4615 NC_009617.1 5340786 5342006 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(5340786..5342006) Clostridium beijerinckii NCIMB 8052 5295769 YP_001311680.1 CDS Cbei_4616 NC_009617.1 5342304 5343452 R PFAM: AAA-4 family protein; KEGG: cno:NT01CX_1362 divergent AAA domain family; transcriptional regulator complement(5342304..5343452) Clostridium beijerinckii NCIMB 8052 5295770 YP_001311681.1 CDS Cbei_4617 NC_009617.1 5343659 5344741 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cno:NT01CX_1361 signal transduction protein containing diguanilate cyclase/phosphodiesterase domain; diguanylate cyclase complement(5343659..5344741) Clostridium beijerinckii NCIMB 8052 5295771 YP_001311682.1 CDS Cbei_4618 NC_009617.1 5345374 5346249 R TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: cpf:CPF_0487 UTP-glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase complement(5345374..5346249) Clostridium beijerinckii NCIMB 8052 5295772 YP_001311683.1 CDS Cbei_4619 NC_009617.1 5346433 5347521 R PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: cno:NT01CX_1781 lipopolysaccharide biosynthesis protein; oxidoreductase domain-containing protein complement(5346433..5347521) Clostridium beijerinckii NCIMB 8052 5295773 YP_001311684.1 CDS Cbei_4620 NC_009617.1 5347762 5348367 R PFAM: sugar transferase; KEGG: bth:BT_0611 glycosyltransferase; sugar transferase complement(5347762..5348367) Clostridium beijerinckii NCIMB 8052 5295774 YP_001311685.1 CDS Cbei_4621 NC_009617.1 5348478 5349695 R PFAM: glycosyl transferase, group 1; KEGG: plu:plu4805 WblI protein; group 1 glycosyl transferase complement(5348478..5349695) Clostridium beijerinckii NCIMB 8052 5295775 YP_001311686.1 CDS Cbei_4622 NC_009617.1 5350144 5351853 R PFAM: cell wall binding repeat-containing protein; KEGG: pfa:PFB0150c protein kinase; cell wall binding repeat-containing protein complement(5350144..5351853) Clostridium beijerinckii NCIMB 8052 5295776 YP_001311687.1 CDS Cbei_4623 NC_009617.1 5352012 5353097 R PFAM: cell wall binding repeat-containing protein; KEGG: cac:CAC1079 uncharacterized protein, related to enterotoxins of other Clostridiales; cell wall binding repeat-containing protein complement(5352012..5353097) Clostridium beijerinckii NCIMB 8052 5295777 YP_001311688.1 CDS Cbei_4624 NC_009617.1 5353276 5354670 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: ctc:CTC00412 alkaline phosphatase synthesis sensor protein PhoR; integral membrane sensor signal transduction histidine kinase complement(5353276..5354670) Clostridium beijerinckii NCIMB 8052 5295778 YP_001311689.1 CDS Cbei_4625 NC_009617.1 5354697 5355425 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ctc:CTC00411 alkaline phosphatase synthesis transcriptional regulatory protein PhoP; two component transcriptional regulator complement(5354697..5355425) Clostridium beijerinckii NCIMB 8052 5295779 YP_001311690.1 CDS Cbei_4626 NC_009617.1 5355988 5357244 R PFAM: glycosyl transferase, group 1; KEGG: bce:BC5269 amylovoran biosynthesis AmsK; group 1 glycosyl transferase complement(5355988..5357244) Clostridium beijerinckii NCIMB 8052 5295780 YP_001311691.1 CDS Cbei_4627 NC_009617.1 5357783 5358847 D PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: mmp:MMP0357 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 5357783..5358847 Clostridium beijerinckii NCIMB 8052 5295781 YP_001311692.1 CDS Cbei_4628 NC_009617.1 5359002 5360507 R KEGG: bsu:BG12692 biosynthesis of teichuronic acid, polymerization; hypothetical protein complement(5359002..5360507) Clostridium beijerinckii NCIMB 8052 5295782 YP_001311693.1 CDS Cbei_4629 NC_009617.1 5360510 5362372 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: cpe:CPE0463 capsular polysaccharide biosynthesis protein; polysaccharide biosynthesis protein CapD complement(5360510..5362372) Clostridium beijerinckii NCIMB 8052 5295783 YP_001311694.1 CDS Cbei_4630 NC_009617.1 5362427 5363410 R PFAM: glycosyl transferase, family 2; KEGG: cpf:CPF_0715 glycosyl transferase, group 2 family protein; glycosyl transferase family protein complement(5362427..5363410) Clostridium beijerinckii NCIMB 8052 5295784 YP_001311695.1 CDS Cbei_4631 NC_009617.1 5363861 5364709 R PFAM: LicD family protein; KEGG: cpr:CPR_0589 LicD family protein; LicD family protein complement(5363861..5364709) Clostridium beijerinckii NCIMB 8052 5295785 YP_001311696.1 CDS Cbei_4632 NC_009617.1 5364921 5365889 D PFAM: glycosyl transferase, family 2; KEGG: mla:Mlab_1428 hypothetical protein; glycosyl transferase family protein 5364921..5365889 Clostridium beijerinckii NCIMB 8052 5295786 YP_001311697.1 CDS Cbei_4633 NC_009617.1 5366205 5368049 D PFAM: beta-lactamase domain protein; cell wall binding repeat-containing protein; KEGG: cpf:CPF_0611 cell wall binding repeat protein; beta-lactamase domain-containing protein 5366205..5368049 Clostridium beijerinckii NCIMB 8052 5295787 YP_001311698.1 CDS Cbei_4634 NC_009617.1 5368167 5369495 R TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system, EIIC; KEGG: efa:EF0292 PTS system, IIC component; PTS system lactose/cellobiose family transporter subunit IIC complement(5368167..5369495) Clostridium beijerinckii NCIMB 8052 5295788 YP_001311699.1 CDS Cbei_4635 NC_009617.1 5369583 5369891 R PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: cac:CAC0384 PTS system, cellobiose-specific component BII; phosphotransferase system, lactose/cellobiose-specific IIB subunit complement(5369583..5369891) Clostridium beijerinckii NCIMB 8052 5295789 YP_001311700.1 CDS Cbei_4636 NC_009617.1 5369972 5370292 R PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: cac:CAC0383 PTS cellobiose-specific component IIA; PTS system lactose/cellobiose-specific transporter subunit IIA complement(5369972..5370292) Clostridium beijerinckii NCIMB 8052 5295790 YP_001311701.1 CDS Cbei_4637 NC_009617.1 5370768 5370992 R KEGG: lwe:lwe2658 hypothetical protein; hypothetical protein complement(5370768..5370992) Clostridium beijerinckii NCIMB 8052 5295791 YP_001311702.1 CDS Cbei_4638 NC_009617.1 5371250 5372590 R TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system, EIIC; KEGG: efa:EF0292 PTS system, IIC component; PTS system lactose/cellobiose family transporter subunit IIC complement(5371250..5372590) Clostridium beijerinckii NCIMB 8052 5295792 YP_001311703.1 CDS Cbei_4639 NC_009617.1 5372872 5373183 R PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: spd:SPD_0233 PTS system, IIB component; phosphotransferase system, lactose/cellobiose-specific IIB subunit complement(5372872..5373183) Clostridium beijerinckii NCIMB 8052 5295793 YP_001311704.1 CDS Cbei_4640 NC_009617.1 5373337 5373657 R PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: cac:CAC0383 PTS cellobiose-specific component IIA; PTS system lactose/cellobiose-specific transporter subunit IIA complement(5373337..5373657) Clostridium beijerinckii NCIMB 8052 5295794 YP_001311705.1 CDS Cbei_4641 NC_009617.1 5374223 5376910 D PFAM: sigma-54 factor, interaction domain-containing protein; PTS system fructose subfamily IIA component; PRD domain protein; SMART: ATPase AAA; KEGG: cac:CAC0382 possible transcriptional regulator of levanase operon, AAA-ATPase domain (NtrC family), fused to 2 BglG-like domains, ortholog of B.subtilis LevR; sigma-54 factor interaction domain-containing protein 5374223..5376910 Clostridium beijerinckii NCIMB 8052 5295795 YP_001311706.1 CDS Cbei_4642 NC_009617.1 5376967 5377716 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: cpr:CPR_2604 transcriptional regulator, RpiR family; RpiR family transcriptional regulator complement(5376967..5377716) Clostridium beijerinckii NCIMB 8052 5295796 YP_001311707.1 CDS Cbei_4643 NC_009617.1 5378060 5379472 R PFAM: glycoside hydrolase, family 1; KEGG: bld:BLi04199 hypothetical protein; glycoside hydrolase complement(5378060..5379472) Clostridium beijerinckii NCIMB 8052 5295797 YP_001311708.1 CDS Cbei_4644 NC_009617.1 5379807 5381798 R TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; KEGG: cac:CAC1348 transketolase, TKT; transketolase complement(5379807..5381798) Clostridium beijerinckii NCIMB 8052 5295798 YP_001311709.1 CDS Cbei_4645 NC_009617.1 5382275 5382922 R TIGRFAM: transaldolase; PFAM: Transaldolase; KEGG: lwe:lwe2691 transaldolase; transaldolase complement(5382275..5382922) Clostridium beijerinckii NCIMB 8052 5295799 YP_001311710.1 CDS Cbei_4646 NC_009617.1 5382962 5383504 R PFAM: sugar isomerase (SIS); KEGG: lbr:LVIS_0443 sugar phosphate isomerase; sugar isomerase (SIS) complement(5382962..5383504) Clostridium beijerinckii NCIMB 8052 5295800 YP_001311711.1 CDS Cbei_4647 NC_009617.1 5383501 5384124 R PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: ooe:OEOE_0131 3-hexulose-6-phosphate synthase family protein; orotidine 5'-phosphate decarboxylase complement(5383501..5384124) Clostridium beijerinckii NCIMB 8052 5295801 YP_001311712.1 CDS Cbei_4648 NC_009617.1 5384143 5385108 R PFAM: PfkB domain protein; KEGG: cac:CAC0395 2-keto-3-deoxygluconate kinase (gene kdgK); ribokinase-like domain-containing protein complement(5384143..5385108) Clostridium beijerinckii NCIMB 8052 5295802 YP_001311713.1 CDS Cbei_4649 NC_009617.1 5385101 5385874 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: lme:LEUM_0500 sugar phosphate isomerase/epimerase; xylose isomerase domain-containing protein complement(5385101..5385874) Clostridium beijerinckii NCIMB 8052 5295803 YP_001311714.1 CDS Cbei_4650 NC_009617.1 5385887 5386936 R PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: cac:CAC0393 KDG operon repressor (gene kdgR), LacI family; LacI family transcriptional regulator complement(5385887..5386936) Clostridium beijerinckii NCIMB 8052 5295804 YP_001311715.1 CDS Cbei_4651 NC_009617.1 5387318 5388604 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pau:PA14_35330 2-ketogluconate transporter; major facilitator superfamily transporter complement(5387318..5388604) Clostridium beijerinckii NCIMB 8052 5295805 YP_001311716.1 CDS Cbei_4652 NC_009617.1 5389050 5389910 R TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: lpl:lp_0805 hydrolase, HAD superfamily, Cof family; cof family hydrolase complement(5389050..5389910) Clostridium beijerinckii NCIMB 8052 5295806 YP_001311717.1 CDS Cbei_4653 NC_009617.1 5390233 5392722 R PFAM: glycoside hydrolase, family 31; KEGG: lbr:LVIS_0137 alpha-glucosidase, family 31 of glycosyl hydrolase; Alpha-glucosidase complement(5390233..5392722) Clostridium beijerinckii NCIMB 8052 5295807 YP_001311718.1 CDS Cbei_4654 NC_009617.1 5392820 5393761 R KEGG: pac:PPA0594 lysophospholipase; lysophospholipase complement(5392820..5393761) Clostridium beijerinckii NCIMB 8052 5295808 YP_001311719.1 CDS Cbei_4655 NC_009617.1 5394111 5396621 R PFAM: glycoside hydrolase, family 31; KEGG: lbr:LVIS_0137 alpha-glucosidase, family 31 of glycosyl hydrolase; Alpha-glucosidase complement(5394111..5396621) Clostridium beijerinckii NCIMB 8052 5295809 YP_001311720.1 CDS Cbei_4656 NC_009617.1 5396804 5398333 R PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3560 oligogalacturonide transporter; major facilitator superfamily transporter complement(5396804..5398333) Clostridium beijerinckii NCIMB 8052 5295810 YP_001311721.1 CDS Cbei_4657 NC_009617.1 5398383 5399795 R catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase complement(5398383..5399795) Clostridium beijerinckii NCIMB 8052 5295811 YP_001311722.1 CDS Cbei_4658 NC_009617.1 5400157 5401770 R PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain; KEGG: mta:Moth_0429 mannitol dehydrogenase; mannitol dehydrogenase domain-containing protein complement(5400157..5401770) Clostridium beijerinckii NCIMB 8052 5295812 YP_001311723.1 CDS Cbei_4659 NC_009617.1 5401890 5402951 R catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase complement(5401890..5402951) Clostridium beijerinckii NCIMB 8052 5295813 YP_001311724.1 CDS Cbei_4660 NC_009617.1 5403130 5403804 R PFAM: GntR family transcriptional regulator; GntR domain protein; KEGG: bld:BLi01354 hypothetical protein; GntR family transcriptional regulator complement(5403130..5403804) Clostridium beijerinckii NCIMB 8052 5295814 YP_001311725.1 CDS Cbei_4661 NC_009617.1 5404143 5405018 D PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: cac:CAC1333 AraC-type sugar metabolism regulator; helix-turn-helix domain-containing protein 5404143..5405018 Clostridium beijerinckii NCIMB 8052 5295815 YP_001311726.1 CDS Cbei_4662 NC_009617.1 5405438 5407042 D PFAM: permease; KEGG: cno:NT01CX_2389 predicted permease superfamily; permease 5405438..5407042 Clostridium beijerinckii NCIMB 8052 5295816 YP_001311727.1 CDS Cbei_4663 NC_009617.1 5407120 5407908 D PFAM: Protein of unknown function DUF1980; KEGG: ctc:CTC00938 membrane-spanning protein; hypothetical protein 5407120..5407908 Clostridium beijerinckii NCIMB 8052 5295817 YP_001311728.1 CDS Cbei_4664 NC_009617.1 5408110 5409051 R PFAM: polysaccharide deacetylase; KEGG: cpr:CPR_0810 polysaccharide deacetylase family protein; polysaccharide deacetylase complement(5408110..5409051) Clostridium beijerinckii NCIMB 8052 5295818 YP_001311729.1 CDS Cbei_4665 NC_009617.1 5409230 5410711 R PFAM: glycoside hydrolase, family 25; cell wall binding repeat-containing protein; KEGG: spd:SPD_1965 choline binding protein PcpA; glycoside hydrolase complement(5409230..5410711) Clostridium beijerinckii NCIMB 8052 5295819 YP_001311730.1 CDS Cbei_4666 NC_009617.1 5410778 5412100 R PFAM: cell wall binding repeat-containing protein; Lytic transglycosylase, catalytic; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; lytic transglycosylase complement(5410778..5412100) Clostridium beijerinckii NCIMB 8052 5295820 YP_001311731.1 CDS Cbei_4667 NC_009617.1 5412241 5414073 R PFAM: sulfatase; KEGG: cpr:CPR_0570 sulfatase family protein; sulfatase complement(5412241..5414073) Clostridium beijerinckii NCIMB 8052 5295821 YP_001311732.1 CDS Cbei_4668 NC_009617.1 5414609 5415514 R PFAM: periplasmic solute binding protein; KEGG: cpf:CPF_2413 ABC transporter substrate-binding protein; periplasmic solute binding protein complement(5414609..5415514) Clostridium beijerinckii NCIMB 8052 5295822 YP_001311733.1 CDS Cbei_4669 NC_009617.1 5415839 5417296 R PFAM: glycoside hydrolase, family 1; KEGG: cac:CAC1405 beta-glucosidase; glycoside hydrolase complement(5415839..5417296) Clostridium beijerinckii NCIMB 8052 5295823 YP_001311734.1 CDS Cbei_4670 NC_009617.1 5417437 5418798 R PFAM: glycoside hydrolase, family 4; KEGG: efa:EF1411 glycosyl hydrolase, family 4; 6-phospho-beta-glucosidase complement(5417437..5418798) Clostridium beijerinckii NCIMB 8052 5295824 YP_001311735.1 CDS Cbei_4671 NC_009617.1 5419371 5420285 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC3026 protein from GDSL (phospholipase B) family of lipolitic enzymes; ABC transporter 5419371..5420285 Clostridium beijerinckii NCIMB 8052 5295825 YP_001311736.1 CDS Cbei_4672 NC_009617.1 5420299 5421303 D KEGG: cac:CAC3025 conserved membrane protein, possible permease, YHCI B.subtilis ortholog; hypothetical protein 5420299..5421303 Clostridium beijerinckii NCIMB 8052 5295826 YP_001311737.1 CDS Cbei_4673 NC_009617.1 5421320 5422105 D PFAM: lipolytic protein, G-D-S-L family; KEGG: cac:CAC3024 acyl-CoA thioesterase family protein; GDSL family lipase 5421320..5422105 Clostridium beijerinckii NCIMB 8052 5295827 YP_001311738.1 CDS Cbei_4674 NC_009617.1 5422180 5424309 R PFAM: glycoside hydrolase, family 3 domain protein; KEGG: pat:Patl_0825 beta-glucosidase; glycoside hydrolase family protein complement(5422180..5424309) Clostridium beijerinckii NCIMB 8052 5295828 YP_001311739.1 CDS Cbei_4675 NC_009617.1 5424367 5425692 R PFAM: glycoside hydrolase, family 30; KEGG: plu:plu2272 unnamed protein product; similar to glucosylceramidase; glycoside hydrolase complement(5424367..5425692) Clostridium beijerinckii NCIMB 8052 5295829 YP_001311740.1 CDS Cbei_4676 NC_009617.1 5425655 5427250 R PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: cpf:CPF_2344 DNA-binding response regulator, AraC family; response regulator receiver protein complement(5425655..5427250) Clostridium beijerinckii NCIMB 8052 5295830 YP_001311741.1 CDS Cbei_4677 NC_009617.1 5427250 5429019 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase internal region; KEGG: tte:TTE2344 predicted ATPase; integral membrane sensor signal transduction histidine kinase complement(5427250..5429019) Clostridium beijerinckii NCIMB 8052 5295831 YP_001311742.1 CDS Cbei_4678 NC_009617.1 5429080 5429922 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_2694 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(5429080..5429922) Clostridium beijerinckii NCIMB 8052 5295832 YP_001311743.1 CDS Cbei_4679 NC_009617.1 5429928 5430827 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_2695 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(5429928..5430827) Clostridium beijerinckii NCIMB 8052 5295833 YP_001311744.1 CDS Cbei_4680 NC_009617.1 5431095 5432408 R PFAM: extracellular solute-binding protein, family 1; KEGG: dge:Dgeo_2696 extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(5431095..5432408) Clostridium beijerinckii NCIMB 8052 5295834 YP_001311745.1 CDS Cbei_4681 NC_009617.1 5432764 5434236 R KEGG: cac:CAC2610 L-fucose isomerase related protein; L-fucose isomerase-like protein complement(5432764..5434236) Clostridium beijerinckii NCIMB 8052 5295835 YP_001311746.1 CDS Cbei_4682 NC_009617.1 5434686 5436434 D PFAM: chemotaxis sensory transducer; KEGG: cth:Cthe_0298 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5434686..5436434 Clostridium beijerinckii NCIMB 8052 5295836 YP_001311747.1 CDS Cbei_4683 NC_009617.1 5436589 5437899 R TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system, EIIC; KEGG: efa:EF0292 PTS system, IIC component; PTS system lactose/cellobiose family transporter subunit IIC complement(5436589..5437899) Clostridium beijerinckii NCIMB 8052 5295837 YP_001311748.1 CDS Cbei_4684 NC_009617.1 5438088 5438396 R PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: spd:SPD_0233 PTS system, IIB component; phosphotransferase system, lactose/cellobiose-specific IIB subunit complement(5438088..5438396) Clostridium beijerinckii NCIMB 8052 5295838 YP_001311749.1 CDS Cbei_4685 NC_009617.1 5438474 5438797 R PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: spb:M28_Spy1733 PTS system, cellobiose-specific IIA component; PTS system lactose/cellobiose-specific transporter subunit IIA complement(5438474..5438797) Clostridium beijerinckii NCIMB 8052 5295839 YP_001311750.1 CDS Cbei_4686 NC_009617.1 5439230 5441917 R PFAM: sigma-54 factor, interaction domain-containing protein; PTS system fructose subfamily IIA component; PRD domain protein; SMART: ATPase AAA; KEGG: cac:CAC0382 possible transcriptional regulator of levanase operon, AAA-ATPase domain (NtrC family), fused to 2 BglG-like domains, ortholog of B.subtilis LevR; sigma-54 factor interaction domain-containing protein complement(5439230..5441917) Clostridium beijerinckii NCIMB 8052 5295840 YP_001311751.1 CDS Cbei_4687 NC_009617.1 5442188 5444353 R KEGG: cno:NT01CX_0286 phage infection protein; phage infection protein complement(5442188..5444353) Clostridium beijerinckii NCIMB 8052 5295841 YP_001311752.1 CDS Cbei_4688 NC_009617.1 5444561 5446963 R TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein; KEGG: chy:CHY_1906 sensory box/GGDEF domain/EAL domain protein; PAS/PAC sensor-containing diguanylate cyclase complement(5444561..5446963) Clostridium beijerinckii NCIMB 8052 5295842 YP_001311753.1 CDS Cbei_4689 NC_009617.1 5447380 5447646 R KEGG: dde:Dde_3289 hypothetical protein; hypothetical protein complement(5447380..5447646) Clostridium beijerinckii NCIMB 8052 5295843 YP_001311754.1 CDS Cbei_4690 NC_009617.1 5447648 5448745 R KEGG: ctc:CTC01451 membrane spanning protein; membrane spanning protein complement(5447648..5448745) Clostridium beijerinckii NCIMB 8052 5295844 YP_001311755.1 CDS Cbei_4691 NC_009617.1 5449160 5450662 R PFAM: polysaccharide biosynthesis protein; KEGG: cpe:CPE0623 probable capsular polysaccharide synthesis protein; polysaccharide biosynthesis protein complement(5449160..5450662) Clostridium beijerinckii NCIMB 8052 5295845 YP_001311756.1 CDS Cbei_4692 NC_009617.1 5451120 5451728 D PFAM: regulatory protein, TetR; KEGG: mst:Msp_0971 hypothetical protein; TetR family transcriptional regulator 5451120..5451728 Clostridium beijerinckii NCIMB 8052 5295846 YP_001311757.1 CDS Cbei_4693 NC_009617.1 5451735 5452430 D KEGG: mla:Mlab_1736 hypothetical protein; hypothetical protein 5451735..5452430 Clostridium beijerinckii NCIMB 8052 5295847 YP_001311758.1 CDS Cbei_4694 NC_009617.1 5452550 5453245 R PFAM: Nucleotidyl transferase; KEGG: cpf:CPF_0610 nucleotidyl transferase family protein; nucleotidyl transferase complement(5452550..5453245) Clostridium beijerinckii NCIMB 8052 5295848 YP_001311759.1 CDS Cbei_4695 NC_009617.1 5453369 5455219 R PFAM: regulatory protein, MarR; Choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: cpr:CPR_0594 choline/ethanolamine kinase family protein; choline/ethanolamine kinase complement(5453369..5455219) Clostridium beijerinckii NCIMB 8052 5295849 YP_001311760.1 CDS Cbei_4696 NC_009617.1 5455672 5458830 R PFAM: cell wall binding repeat-containing protein; KEGG: cpr:CPR_0597 surface protein PspA precursor; cell wall binding repeat-containing protein complement(5455672..5458830) Clostridium beijerinckii NCIMB 8052 5295850 YP_001311761.1 CDS Cbei_4697 NC_009617.1 5459263 5459661 R KEGG: cth:Cthe_2665 Zn-finger containing protein; Zn-finger containing protein complement(5459263..5459661) Clostridium beijerinckii NCIMB 8052 5295851 YP_001311762.1 CDS Cbei_4698 NC_009617.1 5459953 5461938 R PFAM: cell wall binding repeat-containing protein; cell wall hydrolase/autolysin; KEGG: spd:SPD_0126 pneumococcal surface protein A; cell wall hydrolase/autolysin complement(5459953..5461938) Clostridium beijerinckii NCIMB 8052 5295852 YP_001311763.1 CDS Cbei_4699 NC_009617.1 5462404 5464674 R PFAM: cell wall binding repeat-containing protein; cell wall hydrolase/autolysin; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; cell wall hydrolase/autolysin complement(5462404..5464674) Clostridium beijerinckii NCIMB 8052 5295853 YP_001311764.1 CDS Cbei_4700 NC_009617.1 5465006 5465332 R hypothetical protein complement(5465006..5465332) Clostridium beijerinckii NCIMB 8052 5295854 YP_001311765.1 CDS Cbei_4701 NC_009617.1 5465512 5466582 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cac:CAC3544 membrane associated GGDEF domain containing protein; diguanylate cyclase 5465512..5466582 Clostridium beijerinckii NCIMB 8052 5295855 YP_001311766.1 CDS Cbei_4702 NC_009617.1 5466668 5467414 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: cpe:CPE0197 RpiR family transcriptional regulator, glv operon transcriptional regulator; RpiR family transcriptional regulator complement(5466668..5467414) Clostridium beijerinckii NCIMB 8052 5295856 YP_001311767.1 CDS Cbei_4703 NC_009617.1 5467392 5468183 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: cpe:CPE0197 RpiR family transcriptional regulator, glv operon transcriptional regulator; RpiR family transcriptional regulator complement(5467392..5468183) Clostridium beijerinckii NCIMB 8052 5295857 YP_001311768.1 CDS Cbei_4704 NC_009617.1 5468437 5469771 R PFAM: glycoside hydrolase, family 4; KEGG: cac:CAC0533 maltose-6'-phosphate glucosidase (glvA); glycoside hydrolase complement(5468437..5469771) Clostridium beijerinckii NCIMB 8052 5295858 YP_001311769.1 CDS Cbei_4705 NC_009617.1 5470293 5471855 R TIGRFAM: PTS system, alpha-glucoside-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: bsu:BG11848 PTS maltose-specific enzyme IICB component; PTS system alpha-glucoside-specific transporter subunit IIBC complement(5470293..5471855) Clostridium beijerinckii NCIMB 8052 5295859 YP_001311770.1 CDS Cbei_4706 NC_009617.1 5472286 5472762 D TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease, EIIA 1 domain; KEGG: cpr:CPR_0092 pts system, glucose-specific IIA component; PTS system glucose subfamily transporter subunit IIA 5472286..5472762 Clostridium beijerinckii NCIMB 8052 5295860 YP_001311771.1 CDS Cbei_4707 NC_009617.1 5473225 5475012 R PFAM: glycosyl transferase, family 2; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cac:CAC3308 glycosyltransferase fused to TPR-repeat domain; glycosyl transferase family protein complement(5473225..5475012) Clostridium beijerinckii NCIMB 8052 5295861 YP_001311772.1 CDS Cbei_4708 NC_009617.1 5475068 5476384 R PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase-like; KEGG: cac:CAC3310 predicted UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase complement(5475068..5476384) Clostridium beijerinckii NCIMB 8052 5295862 YP_001311773.1 CDS Cbei_4709 NC_009617.1 5476717 5477607 R KEGG: eli:ELI_13285 UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase; UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase complement(5476717..5477607) Clostridium beijerinckii NCIMB 8052 5295863 YP_001311774.1 CDS Cbei_4710 NC_009617.1 5477626 5478663 R KEGG: swo:Swol_0714 hypothetical protein; hypothetical protein complement(5477626..5478663) Clostridium beijerinckii NCIMB 8052 5295864 YP_001311775.1 CDS Cbei_4711 NC_009617.1 5478656 5479759 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mja:MJ1066 spore coat polysaccharide biosynthesis protein C (SpsC); glutamine--scyllo-inositol transaminase complement(5478656..5479759) Clostridium beijerinckii NCIMB 8052 5295865 YP_001311776.1 CDS Cbei_4712 NC_009617.1 5479752 5480714 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: pcr:Pcryo_0617 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(5479752..5480714) Clostridium beijerinckii NCIMB 8052 5295866 YP_001311777.1 CDS Cbei_4713 NC_009617.1 5480711 5483221 R PFAM: glycosyl transferase, group 1; KEGG: cac:CAC3311 TPR-repeat domain fused to glycosyltransferase; group 1 glycosyl transferase complement(5480711..5483221) Clostridium beijerinckii NCIMB 8052 5295867 YP_001311778.1 CDS Cbei_4714 NC_009617.1 5483586 5483870 D hypothetical protein 5483586..5483870 Clostridium beijerinckii NCIMB 8052 5295868 YP_001311779.1 CDS Cbei_4715 NC_009617.1 5484284 5485243 D KEGG: cac:CAC2776 hypothetical protein; hypothetical protein 5484284..5485243 Clostridium beijerinckii NCIMB 8052 5295869 YP_001311780.1 CDS Cbei_4716 NC_009617.1 5485395 5486990 R TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: cpr:CPR_0581 peptide chain release factor 3; peptide chain release factor 3 complement(5485395..5486990) Clostridium beijerinckii NCIMB 8052 5295870 YP_001311781.1 CDS Cbei_4717 NC_009617.1 5487519 5489402 D PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_0126 pneumococcal surface protein A; cell wall binding repeat-containing protein 5487519..5489402 Clostridium beijerinckii NCIMB 8052 5295871 YP_001311782.1 CDS Cbei_4718 NC_009617.1 5489933 5491723 D PFAM: cell wall binding repeat-containing protein; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; cell wall binding repeat-containing protein 5489933..5491723 Clostridium beijerinckii NCIMB 8052 5295872 YP_001311783.1 CDS Cbei_4719 NC_009617.1 5492039 5493988 D PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_2017 choline binding protein A; cell wall binding repeat-containing protein 5492039..5493988 Clostridium beijerinckii NCIMB 8052 5295873 YP_001311784.1 CDS Cbei_4720 NC_009617.1 5494262 5495134 R PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cac:CAC0430 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase complement(5494262..5495134) Clostridium beijerinckii NCIMB 8052 5295874 YP_001311785.1 CDS Cbei_4721 NC_009617.1 5495426 5496493 R TIGRFAM: cell wall/surface repeat protein; PFAM: cell wall binding repeat-containing protein; SMART: Ig domain protein, group 2 domain protein; KEGG: spd:SPD_0126 pneumococcal surface protein A; cell wall/surface repeat-containing protein complement(5495426..5496493) Clostridium beijerinckii NCIMB 8052 5295875 YP_001311786.1 CDS Cbei_4722 NC_009617.1 5496585 5499902 R TIGRFAM: cell wall/surface repeat protein; PFAM: PKD domain containing protein; cell wall binding repeat-containing protein; Ig domain protein, group 2 domain protein; KEGG: cth:Cthe_0056 Ig-like, group 2; cell wall/surface repeat-containing protein complement(5496585..5499902) Clostridium beijerinckii NCIMB 8052 5295876 YP_001311787.1 CDS Cbei_4723 NC_009617.1 5500218 5502320 R PFAM: cell wall binding repeat-containing protein; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; cell wall binding repeat-containing protein complement(5500218..5502320) Clostridium beijerinckii NCIMB 8052 5295877 YP_001311788.1 CDS Cbei_4724 NC_009617.1 5502593 5503900 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC1387 membrane associated chemotaxis sensory transducer protein (MSP domain and HamP domain); methyl-accepting chemotaxis sensory transducer complement(5502593..5503900) Clostridium beijerinckii NCIMB 8052 5295878 YP_001311789.1 CDS Cbei_4725 NC_009617.1 5504170 5506404 R PFAM: cell wall binding repeat-containing protein; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; cell wall binding repeat-containing protein complement(5504170..5506404) Clostridium beijerinckii NCIMB 8052 5295879 YP_001311790.1 CDS Cbei_4726 NC_009617.1 5506727 5508148 R PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_2017 choline binding protein A; cell wall binding repeat-containing protein complement(5506727..5508148) Clostridium beijerinckii NCIMB 8052 5295880 YP_001311791.1 CDS Cbei_4727 NC_009617.1 5508581 5510362 R PFAM: cell wall binding repeat-containing protein; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; cell wall binding repeat-containing protein complement(5508581..5510362) Clostridium beijerinckii NCIMB 8052 5295881 YP_001311792.1 CDS Cbei_4728 NC_009617.1 5511391 5513358 R PFAM: ABC transporter; protein of unknown function DUF214; SMART: ATPase AAA; KEGG: lsl:LSL_0210 ABC transporter ATP-binding protein; ABC transporter complement(5511391..5513358) Clostridium beijerinckii NCIMB 8052 5295882 YP_001311793.1 CDS Cbei_4729 NC_009617.1 5513399 5514829 R PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: bth:BT_1177 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(5513399..5514829) Clostridium beijerinckii NCIMB 8052 5295883 YP_001311794.1 CDS Cbei_4730 NC_009617.1 5514864 5516045 R PFAM: glycosyl transferase, group 1; KEGG: lsl:LSL_0990 glycosyltransferase; group 1 glycosyl transferase complement(5514864..5516045) Clostridium beijerinckii NCIMB 8052 5295884 YP_001311795.1 CDS Cbei_4731 NC_009617.1 5516186 5517154 R PFAM: glycosyl transferase, family 2; KEGG: cpe:CPE0481 beta-1,4-galactosyltransferase; glycosyl transferase family protein complement(5516186..5517154) Clostridium beijerinckii NCIMB 8052 5295885 YP_001311796.1 CDS Cbei_4732 NC_009617.1 5517196 5518356 R PFAM: glycosyl transferase, group 1; KEGG: cpf:CPF_0914 capsular polysaccharide biosynthesis protein; group 1 glycosyl transferase complement(5517196..5518356) Clostridium beijerinckii NCIMB 8052 5295886 YP_001311797.1 CDS Cbei_4733 NC_009617.1 5518491 5519720 R KEGG: cpe:CPE1986 two-component sensor histidine kinase; hypothetical protein complement(5518491..5519720) Clostridium beijerinckii NCIMB 8052 5295887 YP_001311798.1 CDS Cbei_4734 NC_009617.1 5520022 5520576 R KEGG: lil:LA1622 galactoside O-acetyltransferase; galactoside O-acetyltransferase complement(5520022..5520576) Clostridium beijerinckii NCIMB 8052 5295888 YP_001311799.1 CDS Cbei_4735 NC_009617.1 5520805 5521893 R PFAM: glycosyl transferase, group 1; KEGG: tte:TTE0949 predicted glycosyltransferase; group 1 glycosyl transferase complement(5520805..5521893) Clostridium beijerinckii NCIMB 8052 5295889 YP_001311800.1 CDS Cbei_4736 NC_009617.1 5521924 5522412 R PFAM: Glycosyltransferase 28, C-terminal domain; KEGG: lbu:LBUL_1854 glycosyltransferase, family 28; glycosyltransferase family 28 protein complement(5521924..5522412) Clostridium beijerinckii NCIMB 8052 5295890 YP_001311801.1 CDS Cbei_4737 NC_009617.1 5522409 5522858 R PFAM: Oligosaccharide biosynthesis protein Alg14 like; KEGG: stl:stu1105 exopolysaccharide biosynthesis protein, glycosyltransferase; oligosaccharide biosynthesis protein Alg14-like protein complement(5522409..5522858) Clostridium beijerinckii NCIMB 8052 5295891 YP_001311802.1 CDS Cbei_4738 NC_009617.1 5522975 5524324 R PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase-like; KEGG: cpe:CPE0494 UDPglucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase complement(5522975..5524324) Clostridium beijerinckii NCIMB 8052 5295892 YP_001311803.1 CDS Cbei_4739 NC_009617.1 5524482 5525144 R PFAM: sugar transferase; KEGG: cpr:CPR_0454 glycosyltransferase; undecaprenyl-phosphate galactose phosphotransferase complement(5524482..5525144) Clostridium beijerinckii NCIMB 8052 5295893 YP_001311804.1 CDS Cbei_4740 NC_009617.1 5525489 5526271 R PFAM: PHP C-terminal domain protein; KEGG: cpf:CPF_0243 capsular polysaccharide biosynthesis protein; protein-tyrosine-phosphatase complement(5525489..5526271) Clostridium beijerinckii NCIMB 8052 5295894 YP_001311805.1 CDS Cbei_4741 NC_009617.1 5526396 5527118 R TIGRFAM: capsular exopolysaccharide family; KEGG: cpf:CPF_0465 capsular polysaccharide biosynthesis protein; exopolysaccharide tyrosine-protein kinase complement(5526396..5527118) Clostridium beijerinckii NCIMB 8052 5295895 YP_001311806.1 CDS Cbei_4742 NC_009617.1 5527399 5528091 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: cpe:CPE0491 capsular polysaccharide biosynthsis protein; lipopolysaccharide biosynthesis protein complement(5527399..5528091) Clostridium beijerinckii NCIMB 8052 5295896 YP_001311807.1 CDS Cbei_4743 NC_009617.1 5528312 5529403 R PFAM: protein of unknown function UPF0118; KEGG: cac:CAC2432 predicted permease; hypothetical protein complement(5528312..5529403) Clostridium beijerinckii NCIMB 8052 5295897 YP_001311808.1 CDS Cbei_4744 NC_009617.1 5529669 5530673 D PFAM: NLP/P60 protein; KEGG: cac:CAC0309 cell wall-associated hydrolase; NLP/P60 protein 5529669..5530673 Clostridium beijerinckii NCIMB 8052 5295898 YP_001311809.1 CDS Cbei_4745 NC_009617.1 5530920 5532053 D PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_2028 choline binding protein D; cell wall binding repeat-containing protein 5530920..5532053 Clostridium beijerinckii NCIMB 8052 5295899 YP_001311810.1 CDS Cbei_4747 NC_009617.1 5532679 5536767 R PFAM: glycosyl transferase, family 2; KEGG: efa:EF2180 glycosyl transferase, group 2 family protein; glycosyl transferase family protein complement(5532679..5536767) Clostridium beijerinckii NCIMB 8052 5296439 YP_001311811.1 CDS Cbei_4748 NC_009617.1 5536833 5538281 R KEGG: hsa:729900 similar to Golgin subfamily A member 2 (Cis-Golgi matrix protein GM130); hypothetical protein complement(5536833..5538281) Clostridium beijerinckii NCIMB 8052 5295901 YP_001311812.1 CDS Cbei_4749 NC_009617.1 5538285 5539211 R PFAM: Methyltransferase type 12; KEGG: ppd:Ppro_2106 methyltransferase type 12; type 12 methyltransferase complement(5538285..5539211) Clostridium beijerinckii NCIMB 8052 5295902 YP_001311813.1 CDS Cbei_4750 NC_009617.1 5539230 5540492 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: hch:HCH_02231 ABC-type polysaccharide/polyol phosphate transport system, ATPase component; ABC transporter complement(5539230..5540492) Clostridium beijerinckii NCIMB 8052 5295903 YP_001311814.1 CDS Cbei_4751 NC_009617.1 5540505 5541881 R PFAM: ABC transporter; KEGG: efa:EF2183 ABC transporter permease; ABC transporter complement(5540505..5541881) Clostridium beijerinckii NCIMB 8052 5295904 YP_001311815.1 CDS Cbei_4752 NC_009617.1 5541897 5542736 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: ljo:LJ1052 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase complement(5541897..5542736) Clostridium beijerinckii NCIMB 8052 5295905 YP_001311816.1 CDS Cbei_4753 NC_009617.1 5542751 5543719 R PFAM: glycosyl transferase, family 2; KEGG: bcl:ABC3693 glycosyltransferase; glycosyl transferase family protein complement(5542751..5543719) Clostridium beijerinckii NCIMB 8052 5295906 YP_001311817.1 CDS Cbei_4754 NC_009617.1 5543706 5544725 R TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: lga:LGAS_1136 dTDP-D-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase complement(5543706..5544725) Clostridium beijerinckii NCIMB 8052 5295907 YP_001311818.1 CDS Cbei_4755 NC_009617.1 5544891 5545442 R TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; KEGG: efa:EF2193 dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase complement(5544891..5545442) Clostridium beijerinckii NCIMB 8052 5295908 YP_001311819.1 CDS Cbei_4756 NC_009617.1 5545477 5546367 R TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: lga:LGAS_1135 dTDP-glucose pyrophosphorylase; glucose-1-phosphate thymidylyltransferase complement(5545477..5546367) Clostridium beijerinckii NCIMB 8052 5295909 YP_001311820.1 CDS Cbei_4757 NC_009617.1 5546786 5548204 D PFAM: sugar transferase; KEGG: dsy:DSY3322 hypothetical protein; undecaprenyl-phosphate galactose phosphotransferase 5546786..5548204 Clostridium beijerinckii NCIMB 8052 5295910 YP_001311821.1 CDS Cbei_4758 NC_009617.1 5548280 5549149 D PFAM: glycosyl transferase, family 2; KEGG: mst:Msp_0207 predicted glycosyltransferase; glycosyl transferase family protein 5548280..5549149 Clostridium beijerinckii NCIMB 8052 5295911 YP_001311822.1 CDS Cbei_4759 NC_009617.1 5549358 5551190 D PFAM: O-antigen polymerase; KEGG: dsy:DSY3328 hypothetical protein; O-antigen polymerase 5549358..5551190 Clostridium beijerinckii NCIMB 8052 5295912 YP_001311823.1 CDS Cbei_4760 NC_009617.1 5552462 5554234 R PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_1965 choline binding protein PcpA; cell wall binding repeat-containing protein complement(5552462..5554234) Clostridium beijerinckii NCIMB 8052 5295913 YP_001311824.1 CDS Cbei_4761 NC_009617.1 5555079 5556296 R PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_2017 choline binding protein A; cell wall binding repeat-containing protein complement(5555079..5556296) Clostridium beijerinckii NCIMB 8052 5295914 YP_001311825.1 CDS Cbei_4762 NC_009617.1 5556427 5557671 R PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_2017 choline binding protein A; cell wall binding repeat-containing protein complement(5556427..5557671) Clostridium beijerinckii NCIMB 8052 5295915 YP_001311826.1 CDS Cbei_4763 NC_009617.1 5557722 5559263 R PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_2017 choline binding protein A; cell wall binding repeat-containing protein complement(5557722..5559263) Clostridium beijerinckii NCIMB 8052 5295916 YP_001311827.1 CDS Cbei_4764 NC_009617.1 5559494 5560759 R PFAM: cell wall binding repeat-containing protein; KEGG: spn:SP_2190 choline binding protein A; cell wall binding repeat-containing protein complement(5559494..5560759) Clostridium beijerinckii NCIMB 8052 5295917 YP_001311828.1 CDS Cbei_4765 NC_009617.1 5560924 5562225 R PFAM: cell wall binding repeat-containing protein; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; cell wall binding repeat-containing protein complement(5560924..5562225) Clostridium beijerinckii NCIMB 8052 5295918 YP_001311829.1 CDS Cbei_4766 NC_009617.1 5562693 5564420 R PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_1965 choline binding protein PcpA; cell wall binding repeat-containing protein complement(5562693..5564420) Clostridium beijerinckii NCIMB 8052 5295919 YP_001311830.1 CDS Cbei_4767 NC_009617.1 5564654 5564911 D hypothetical protein 5564654..5564911 Clostridium beijerinckii NCIMB 8052 5295920 YP_001311831.1 CDS Cbei_4768 NC_009617.1 5564932 5565153 D hypothetical protein 5564932..5565153 Clostridium beijerinckii NCIMB 8052 5295921 YP_001311832.1 CDS Cbei_4769 NC_009617.1 5565252 5565503 D hypothetical protein 5565252..5565503 Clostridium beijerinckii NCIMB 8052 5295922 YP_001311833.1 CDS Cbei_4770 NC_009617.1 5566019 5566285 D hypothetical protein 5566019..5566285 Clostridium beijerinckii NCIMB 8052 5295923 YP_001311834.1 CDS Cbei_4771 NC_009617.1 5566485 5567345 R PFAM: protein of unknown function DUF161; KEGG: cpe:CPE2365 hypothetical protein; hypothetical protein complement(5566485..5567345) Clostridium beijerinckii NCIMB 8052 5295924 YP_001311835.1 CDS Cbei_4772 NC_009617.1 5567563 5569680 R PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC00888 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(5567563..5569680) Clostridium beijerinckii NCIMB 8052 5295925 YP_001311836.1 CDS Cbei_4773 NC_009617.1 5570529 5579774 R PFAM: carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: ctc:CTC02455 cyclic beta 1-2 glucan synthetase; glycosyltransferase complement(5570529..5579774) Clostridium beijerinckii NCIMB 8052 5295926 YP_001311837.1 CDS Cbei_4774 NC_009617.1 5580200 5581534 R catalyzes the removal of amino acids from the N termini of peptides; aminopeptidase 2 complement(5580200..5581534) Clostridium beijerinckii NCIMB 8052 5295927 YP_001311838.1 CDS Cbei_4775 NC_009617.1 5581635 5582699 R TIGRFAM: phage replisome organizer, KEGG: lmo:lmo2317 similar to protein gp49; phage replisome organizer complement(5581635..5582699) Clostridium beijerinckii NCIMB 8052 5295928 YP_001311839.1 CDS Cbei_4776 NC_009617.1 5583394 5584278 R TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: cpf:CPF_2161 dihydrodipicolinate synthase; dihydrodipicolinate synthase complement(5583394..5584278) Clostridium beijerinckii NCIMB 8052 5295929 YP_001311840.1 CDS Cbei_4777 NC_009617.1 5584485 5585660 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: cpf:CPF_0586 cation efflux family protein; cation diffusion facilitator family transporter 5584485..5585660 Clostridium beijerinckii NCIMB 8052 5295930 YP_001311841.1 CDS Cbei_4778 NC_009617.1 5585917 5586723 D KEGG: bch:Bcen2424_0018 hypothetical protein; hypothetical protein 5585917..5586723 Clostridium beijerinckii NCIMB 8052 5295931 YP_001311842.1 CDS Cbei_4779 NC_009617.1 5587138 5587860 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_0583 amino acid ABC transporter ATP-binding protein; ABC transporter complement(5587138..5587860) Clostridium beijerinckii NCIMB 8052 5295932 YP_001311843.1 CDS Cbei_4780 NC_009617.1 5587847 5588506 R TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sha:SH1104 hypothetical protein; polar amino acid ABC transporter inner membrane subunit complement(5587847..5588506) Clostridium beijerinckii NCIMB 8052 5295933 YP_001311844.1 CDS Cbei_4781 NC_009617.1 5589267 5590103 R PFAM: extracellular solute-binding protein, family 3; KEGG: cpe:CPE0600 probable amino acid ABC transporter; extracellular solute-binding protein complement(5589267..5590103) Clostridium beijerinckii NCIMB 8052 5295934 YP_001311845.1 CDS Cbei_4782 NC_009617.1 5590654 5592828 R KEGG: cpr:CPR_0566 helicase; helicase complement(5590654..5592828) Clostridium beijerinckii NCIMB 8052 5295935 YP_001311846.1 CDS Cbei_4783 NC_009617.1 5593186 5595318 R KEGG: cpr:CPR_0565 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: ATPase AAA; ATP-dependent metalloprotease FtsH complement(5593186..5595318) Clostridium beijerinckii NCIMB 8052 5295936 YP_001311847.1 CDS Cbei_4784 NC_009617.1 5595528 5595752 R KEGG: cpf:CPF_0577 hypothetical protein; hypothetical protein complement(5595528..5595752) Clostridium beijerinckii NCIMB 8052 5295937 YP_001311848.1 CDS Cbei_4785 NC_009617.1 5595960 5596502 R TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; KEGG: cpr:CPR_0564 signal peptidase I; signal peptidase I complement(5595960..5596502) Clostridium beijerinckii NCIMB 8052 5295938 YP_001311849.1 CDS Cbei_4786 NC_009617.1 5596710 5597294 R TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; KEGG: cpr:CPR_0564 signal peptidase I; signal peptidase I complement(5596710..5597294) Clostridium beijerinckii NCIMB 8052 5295939 YP_001311850.1 CDS Cbei_4787 NC_009617.1 5597636 5598931 R TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: cpf:CPF_0576 diaminopimelate decarboxylase; diaminopimelate decarboxylase complement(5597636..5598931) Clostridium beijerinckii NCIMB 8052 5295940 YP_001311851.1 CDS Cbei_4788 NC_009617.1 5599596 5600270 R KEGG: cac:CAC0148 predicted enzyme with TIM-barrel fold; hypothetical protein complement(5599596..5600270) Clostridium beijerinckii NCIMB 8052 5295941 YP_001311852.1 CDS Cbei_4789 NC_009617.1 5601118 5602113 D KEGG: rno:686576 hypothetical protein LOC686576; hypothetical protein 5601118..5602113 Clostridium beijerinckii NCIMB 8052 5295942 YP_001311853.1 CDS Cbei_4790 NC_009617.1 5602110 5603036 D KEGG: lwe:lwe0571 secreted protein; hypothetical protein 5602110..5603036 Clostridium beijerinckii NCIMB 8052 5295943 YP_001311854.1 CDS Cbei_4791 NC_009617.1 5603097 5604359 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cno:NT01CX_0316 membrane assosiated methyl-accepting chemotaxis protein with HAMP domain; methyl-accepting chemotaxis sensory transducer complement(5603097..5604359) Clostridium beijerinckii NCIMB 8052 5295944 YP_001311855.1 CDS Cbei_4792 NC_009617.1 5604859 5605395 D KEGG: bha:BH2521 transposase (21); transposase (21) 5604859..5605395 Clostridium beijerinckii NCIMB 8052 5295945 YP_001311856.1 CDS Cbei_4793 NC_009617.1 5605415 5605921 D KEGG: bha:BH2520 transposase related protein (20); transposase-like protein (20) 5605415..5605921 Clostridium beijerinckii NCIMB 8052 5295946 YP_001311857.1 CDS Cbei_4794 NC_009617.1 5606230 5607420 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 5606230..5607420 Clostridium beijerinckii NCIMB 8052 5295947 YP_001311858.1 CDS Cbei_4795 NC_009617.1 5607516 5608040 R KEGG: cpf:CPF_1398 hypothetical protein; hypothetical protein complement(5607516..5608040) Clostridium beijerinckii NCIMB 8052 5295948 YP_001311859.1 CDS Cbei_4796 NC_009617.1 5608340 5609551 D PFAM: phosphoesterase, DHHA1; Threonyl/alanyl tRNA synthetase, SAD; KEGG: cpf:CPF_0714 DHHA1 domain protein; threonyl/alanyl tRNA synthetase 5608340..5609551 Clostridium beijerinckii NCIMB 8052 5295949 YP_001311860.1 CDS Cbei_4797 NC_009617.1 5610012 5610743 R PFAM: GntR family transcriptional regulator; UbiC transcription regulator-associated domain protein; KEGG: cac:CAC3502 transcriptional regulator, fadR family; GntR family transcriptional regulator complement(5610012..5610743) Clostridium beijerinckii NCIMB 8052 5295950 YP_001311861.1 CDS Cbei_4798 NC_009617.1 5610922 5611764 R PFAM: PfkB domain protein; KEGG: stm:STM3600 sugar kinase; ribokinase-like domain-containing protein complement(5610922..5611764) Clostridium beijerinckii NCIMB 8052 5295951 YP_001311862.1 CDS Cbei_4799 NC_009617.1 5611791 5612759 R PFAM: sugar isomerase (SIS); KEGG: cac:CAC3501 predicted phosphosugar isomerase; sugar isomerase (SIS) complement(5611791..5612759) Clostridium beijerinckii NCIMB 8052 5295952 YP_001311863.1 CDS Cbei_4800 NC_009617.1 5613259 5614092 R PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; KEGG: cpr:CPR_0567 amino acid ABC transporter; extracellular solute-binding protein complement(5613259..5614092) Clostridium beijerinckii NCIMB 8052 5295953 YP_001311864.1 CDS Cbei_4801 NC_009617.1 5614417 5614623 R PFAM: Heavy metal transport/detoxification protein; KEGG: dsy:DSY4509 hypothetical protein; heavy metal transport/detoxification protein complement(5614417..5614623) Clostridium beijerinckii NCIMB 8052 5295954 YP_001311865.1 CDS Cbei_4802 NC_009617.1 5614773 5617202 R TIGRFAM: ATPase P; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: dsy:DSY4510 hypothetical protein; heavy metal translocating P-type ATPase complement(5614773..5617202) Clostridium beijerinckii NCIMB 8052 5295955 YP_001311866.1 CDS Cbei_4803 NC_009617.1 5617356 5617622 R PFAM: protein of unknown function DUF156; KEGG: cpr:CPR_0193 hypothetical protein; hypothetical protein complement(5617356..5617622) Clostridium beijerinckii NCIMB 8052 5295956 YP_001311867.1 CDS Cbei_4804 NC_009617.1 5617891 5618376 R TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease, EIIA 1 domain; KEGG: bsu:BG11450 PTS glucose-specific enzyme IIA component; PTS system glucose subfamily transporter subunit IIA complement(5617891..5618376) Clostridium beijerinckii NCIMB 8052 5295957 YP_001311868.1 CDS Cbei_4805 NC_009617.1 5618385 5619713 R PFAM: glycoside hydrolase, family 4; KEGG: eca:ECA3226 6-phospho-alpha-glucosidase; 6-phospho-beta-glucosidase complement(5618385..5619713) Clostridium beijerinckii NCIMB 8052 5295958 YP_001311869.1 CDS Cbei_4806 NC_009617.1 5619735 5621330 R PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: cac:CAC3425 PTS system, (possibly glucose-specific) IIBC component; phosphotransferase system, EIIC complement(5619735..5621330) Clostridium beijerinckii NCIMB 8052 5295959 YP_001311870.1 CDS Cbei_4807 NC_009617.1 5621572 5622369 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: efa:EF2259 phosphosugar-binding transcriptional regulator; RpiR family transcriptional regulator complement(5621572..5622369) Clostridium beijerinckii NCIMB 8052 5295960 YP_001311871.1 CDS Cbei_4808 NC_009617.1 5622483 5624246 R TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase, HD sub domain; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase, HD region; KEGG: cpf:CPF_1164 sensory box-containing diguanylate cyclase; diguanylate cyclase and metal dependent phosphohydrolase complement(5622483..5624246) Clostridium beijerinckii NCIMB 8052 5295961 YP_001311872.1 CDS Cbei_4809 NC_009617.1 5624547 5625734 R TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: btk:BT9727_3419 N-acyl-L-amino acid amidohydrolase; amidohydrolase complement(5624547..5625734) Clostridium beijerinckii NCIMB 8052 5295962 YP_001311873.1 CDS Cbei_4810 NC_009617.1 5626032 5627075 R PFAM: Abortive infection protein; KEGG: ssa:SSA_1079 hypothetical protein; abortive infection protein complement(5626032..5627075) Clostridium beijerinckii NCIMB 8052 5295963 YP_001311874.1 CDS Cbei_4811 NC_009617.1 5627090 5627860 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: cac:CAC1665 predicted amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(5627090..5627860) Clostridium beijerinckii NCIMB 8052 5295964 YP_001311875.1 CDS Cbei_4812 NC_009617.1 5627982 5628326 R KEGG: cac:CAC0920 protein related to MifH/DopD protein family, function in bacteria is unknown; related to MifH/DopD protein family; hypothetical protein complement(5627982..5628326) Clostridium beijerinckii NCIMB 8052 5295965 YP_001311876.1 CDS Cbei_4813 NC_009617.1 5628874 5629263 D PFAM: response regulator receiver; KEGG: ace:Acel_2099 response regulator receiver modulated diguanylate phosphodiesterase; response regulator receiver protein 5628874..5629263 Clostridium beijerinckii NCIMB 8052 5295966 YP_001311877.1 CDS Cbei_4814 NC_009617.1 5629293 5632232 D TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: sfr:Sfri_1019 PAS/PAC sensor hybrid histidine kinase; multi-sensor hybrid histidine kinase 5629293..5632232 Clostridium beijerinckii NCIMB 8052 5295967 YP_001311878.1 CDS Cbei_4815 NC_009617.1 5632276 5632638 D hypothetical protein 5632276..5632638 Clostridium beijerinckii NCIMB 8052 5295968 YP_001311879.1 CDS Cbei_4816 NC_009617.1 5632765 5633175 R TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ade:Adeh_0219 hemerythrin-like, metal-binding protein; hemerythrin-like metal-binding protein complement(5632765..5633175) Clostridium beijerinckii NCIMB 8052 5295969 YP_001311880.1 CDS Cbei_4817 NC_009617.1 5633416 5633643 R hypothetical protein complement(5633416..5633643) Clostridium beijerinckii NCIMB 8052 5295970 YP_001311881.1 CDS Cbei_4818 NC_009617.1 5633677 5634084 R TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: gsu:GSU2929 hypothetical protein; hemerythrin-like metal-binding protein complement(5633677..5634084) Clostridium beijerinckii NCIMB 8052 5295971 YP_001311882.1 CDS Cbei_4819 NC_009617.1 5634203 5634610 R PFAM: response regulator receiver; KEGG: cth:Cthe_0805 response regulator receiver protein; response regulator receiver protein complement(5634203..5634610) Clostridium beijerinckii NCIMB 8052 5295972 YP_001311883.1 CDS Cbei_4820 NC_009617.1 5634637 5636109 R PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: dsy:DSY3378 hypothetical protein; response regulator receiver sensor signal transduction histidine kinase complement(5634637..5636109) Clostridium beijerinckii NCIMB 8052 5295973 YP_001311884.1 CDS Cbei_4821 NC_009617.1 5636151 5637755 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC0120 membrane-associated methyl-accepting chemotaxis protein with HAMP domain; methyl-accepting chemotaxis sensory transducer complement(5636151..5637755) Clostridium beijerinckii NCIMB 8052 5295974 YP_001311885.1 CDS Cbei_4822 NC_009617.1 5637771 5638268 R PFAM: CheW domain protein; KEGG: cth:Cthe_0809 CheW protein; CheW protein complement(5637771..5638268) Clostridium beijerinckii NCIMB 8052 5295975 YP_001311886.1 CDS Cbei_4823 NC_009617.1 5638303 5640927 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cth:Cthe_0298 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(5638303..5640927) Clostridium beijerinckii NCIMB 8052 5295976 YP_001311887.1 CDS Cbei_4824 NC_009617.1 5641026 5641397 R PFAM: response regulator receiver; KEGG: ctc:CTC01729 chemotaxis protein cheY; response regulator receiver protein complement(5641026..5641397) Clostridium beijerinckii NCIMB 8052 5295977 YP_001311888.1 CDS Cbei_4825 NC_009617.1 5641840 5642496 D PFAM: LuxR family transcriptional regulator; response regulator receiver; KEGG: cno:NT01CX_1314 response regulator (CheY-like recever domain and HTH); two component LuxR family transcriptional regulator 5641840..5642496 Clostridium beijerinckii NCIMB 8052 5295978 YP_001311889.1 CDS Cbei_4826 NC_009617.1 5642508 5643533 R PFAM: CheB methylesterase; response regulator receiver; KEGG: cth:Cthe_0807 response regulator receiver modulated CheB methylesterase; response regulator receiver modulated CheB methylesterase complement(5642508..5643533) Clostridium beijerinckii NCIMB 8052 5295979 YP_001311890.1 CDS Cbei_4827 NC_009617.1 5643576 5644391 R PFAM: MCP methyltransferase, CheR-type; KEGG: cth:Cthe_0808 MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase complement(5643576..5644391) Clostridium beijerinckii NCIMB 8052 5295980 YP_001311891.1 CDS Cbei_4828 NC_009617.1 5644407 5646128 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cth:Cthe_0039 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(5644407..5646128) Clostridium beijerinckii NCIMB 8052 5295981 YP_001311892.1 CDS Cbei_4829 NC_009617.1 5646181 5648229 R PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; P2 response regulator binding domain protein; KEGG: cth:Cthe_0810 chemotaxis protein CheAs; chemotaxis protein CheA complement(5646181..5648229) Clostridium beijerinckii NCIMB 8052 5295982 YP_001311893.1 CDS Cbei_4830 NC_009617.1 5648488 5649222 R PFAM: OmpA/MotB domain protein; KEGG: cac:CAC1845 flagellar motor protein MotB; OmpA/MotB domain-containing protein complement(5648488..5649222) Clostridium beijerinckii NCIMB 8052 5295983 YP_001311894.1 CDS Cbei_4831 NC_009617.1 5649240 5650025 R With Mot B forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.; flagellar motor protein MotA complement(5649240..5650025) Clostridium beijerinckii NCIMB 8052 5295984 YP_001311895.1 CDS Cbei_4832 NC_009617.1 5650601 5652325 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cno:NT01CX_0316 membrane assosiated methyl-accepting chemotaxis protein with HAMP domain; methyl-accepting chemotaxis sensory transducer complement(5650601..5652325) Clostridium beijerinckii NCIMB 8052 5295985 YP_001311896.1 CDS Cbei_4833 NC_009617.1 5652616 5654058 R PFAM: glycoside hydrolase, family 1; KEGG: lwe:lwe0245 glycosyl hydrolase, family 1; glycoside hydrolase complement(5652616..5654058) Clostridium beijerinckii NCIMB 8052 5295986 YP_001311897.1 CDS Cbei_4834 NC_009617.1 5654481 5655176 R PFAM: Rubrerythrin; manganese containing catalase; KEGG: cac:CAC2800 CotJC-like protein (GS80 family); catalase complement(5654481..5655176) Clostridium beijerinckii NCIMB 8052 5295987 YP_001311898.1 CDS Cbei_4835 NC_009617.1 5655499 5656605 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cth:Cthe_1546 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin complement(5655499..5656605) Clostridium beijerinckii NCIMB 8052 5295988 YP_001311899.1 CDS Cbei_4836 NC_009617.1 5656876 5657595 D PFAM: GntR family transcriptional regulator; UbiC transcription regulator-associated domain protein; KEGG: eca:ECA0190 GntR-family transcriptional regulator; GntR family transcriptional regulator 5656876..5657595 Clostridium beijerinckii NCIMB 8052 5295989 YP_001311900.1 CDS Cbei_4837 NC_009617.1 5657608 5658807 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA0189 mandelate racemase / muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein complement(5657608..5658807) Clostridium beijerinckii NCIMB 8052 5295990 YP_001311901.1 CDS Cbei_4838 NC_009617.1 5659074 5660924 D TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease, EIIA 1 domain; phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: eca:ECA0188 PTS system, IIABC component; PTS system glucose subfamily transporter subunit IIA 5659074..5660924 Clostridium beijerinckii NCIMB 8052 5295991 YP_001311902.1 CDS Cbei_4839 NC_009617.1 5661064 5661855 R PFAM: aminoglycoside 3-N-acetyltransferase; KEGG: bcz:BCZK2651 aminoglycoside N3'-acetyltransferase; aminoglycoside N(3')-acetyltransferase complement(5661064..5661855) Clostridium beijerinckii NCIMB 8052 5295992 YP_001311903.1 CDS Cbei_4840 NC_009617.1 5661880 5662731 R PFAM: helix-turn-helix- domain containing protein, AraC type; Cupin 2, conserved barrel domain protein; KEGG: lmo:lmo2164 hypothetical protein; helix-turn-helix domain-containing protein complement(5661880..5662731) Clostridium beijerinckii NCIMB 8052 5295993 YP_001311904.1 CDS Cbei_4841 NC_009617.1 5662778 5663827 R PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: lwe:lwe2175 oxidoreductase, Gfo/Idh/MocA family; oxidoreductase domain-containing protein complement(5662778..5663827) Clostridium beijerinckii NCIMB 8052 5295994 YP_001311905.1 CDS Cbei_4842 NC_009617.1 5663859 5664830 R PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel; KEGG: gka:GK2111 hypothetical protein; xylose isomerase domain-containing protein complement(5663859..5664830) Clostridium beijerinckii NCIMB 8052 5295995 YP_001311906.1 CDS Cbei_4843 NC_009617.1 5664865 5665965 R PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: tte:TTE1951 predicted dehydrogenase and related proteins; oxidoreductase domain-containing protein complement(5664865..5665965) Clostridium beijerinckii NCIMB 8052 5295996 YP_001311907.1 CDS Cbei_4845 NC_009617.1 5667304 5668476 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: zmo:ZMO1264 mandelate racemase; mandelate racemase/muconate lactonizing protein complement(5667304..5668476) Clostridium beijerinckii NCIMB 8052 5296440 YP_001311908.1 CDS Cbei_4846 NC_009617.1 5668493 5670328 R TIGRFAM: PTS system, glucose subfamily, IIA subunit; PTS system, beta-glucoside-specific IIABC subunit; PFAM: sugar-specific permease, EIIA 1 domain; phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: lca:LSEI_1105 beta-glucosides PTS, EIIBCA; PTS system beta-glucoside-specific transporter subunit IIABC complement(5668493..5670328) Clostridium beijerinckii NCIMB 8052 5295998 YP_001311909.1 CDS Cbei_4847 NC_009617.1 5670402 5671790 R PFAM: glycoside hydrolase, family 4; KEGG: lwe:lwe0496 glycosyl hydrolase, family 4; glycoside hydrolase complement(5670402..5671790) Clostridium beijerinckii NCIMB 8052 5295999 YP_001311910.1 CDS Cbei_4848 NC_009617.1 5671986 5672846 R PFAM: helix-turn-helix protein RpiR; KEGG: lwe:lwe2648 phosphosugar-binding transcriptional regulator, RpiR family; RpiR family transcriptional regulator complement(5671986..5672846) Clostridium beijerinckii NCIMB 8052 5296000 YP_001311911.1 CDS Cbei_4849 NC_009617.1 5673448 5674506 D KEGG: ppr:PBPRB1872 galactoside ABC transporter periplasmic D-galactose/D-glucose-binding protein; galactoside ABC transporter periplasmic D-galactose/D-glucose-binding protein 5673448..5674506 Clostridium beijerinckii NCIMB 8052 5296001 YP_001311912.1 CDS Cbei_4850 NC_009617.1 5675308 5676687 R TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; KEGG: cpe:CPE0367 RNA methyltransferase; RNA methyltransferase complement(5675308..5676687) Clostridium beijerinckii NCIMB 8052 5296002 YP_001311913.1 CDS Cbei_4851 NC_009617.1 5677589 5679010 R TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; KEGG: cpr:CPR_0342 pyruvate kinase; pyruvate kinase complement(5677589..5679010) Clostridium beijerinckii NCIMB 8052 5296003 YP_001311914.1 CDS Cbei_4852 NC_009617.1 5679155 5680111 R catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase complement(5679155..5680111) Clostridium beijerinckii NCIMB 8052 5296004 YP_001311915.1 CDS dnaE NC_009617.1 5680568 5684143 R catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria.; DNA polymerase III DnaE complement(5680568..5684143) Clostridium beijerinckii NCIMB 8052 5296005 YP_001311916.1 CDS Cbei_4854 NC_009617.1 5684247 5684531 R PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: ppd:Ppro_0287 stress responsive alpha-beta barrel domain protein; stress responsive alpha-beta barrel domain-containing protein complement(5684247..5684531) Clostridium beijerinckii NCIMB 8052 5296006 YP_001311917.1 CDS Cbei_4855 NC_009617.1 5684555 5685502 R PFAM: protein of unknown function DUF199; KEGG: cpr:CPR_0337 hypothetical protein; hypothetical protein complement(5684555..5685502) Clostridium beijerinckii NCIMB 8052 5296007 YP_001311918.1 CDS Cbei_4856 NC_009617.1 5685545 5686897 R PFAM: protein of unknown function UPF0052 and CofD; KEGG: ctc:CTC02494 transporter; hypothetical protein complement(5685545..5686897) Clostridium beijerinckii NCIMB 8052 5296008 YP_001311919.1 CDS Cbei_4857 NC_009617.1 5686894 5687778 R PFAM: uncharacterised P-loop ATPase protein UPF0042; KEGG: cpr:CPR_0335 ATP-binding protein; hypothetical protein complement(5686894..5687778) Clostridium beijerinckii NCIMB 8052 5296009 YP_001311920.1 CDS murB NC_009617.1 5688005 5688919 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(5688005..5688919) Clostridium beijerinckii NCIMB 8052 5296010 YP_001311921.1 CDS uvrC NC_009617.1 5689157 5691022 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(5689157..5691022) Clostridium beijerinckii NCIMB 8052 5296011 YP_001311922.1 CDS Cbei_4860 NC_009617.1 5691166 5692635 R PFAM: penicillin-binding protein, transpeptidase; KEGG: cac:CAC0506 penicillin-binding protein; peptidoglycan glycosyltransferase complement(5691166..5692635) Clostridium beijerinckii NCIMB 8052 5296012 YP_001311923.1 CDS Cbei_4861 NC_009617.1 5692639 5693859 R PFAM: cell cycle protein; KEGG: cpr:CPR_0331 cell cycle protein, FtsW/RodA/SpoVE family; cell cycle protein complement(5692639..5693859) Clostridium beijerinckii NCIMB 8052 5296013 YP_001311924.1 CDS Cbei_4862 NC_009617.1 5694012 5694455 R PFAM: Forkhead-associated protein; KEGG: cpf:CPF_0338 FHA domain protein; FHA domain-containing protein complement(5694012..5694455) Clostridium beijerinckii NCIMB 8052 5296014 YP_001311925.1 CDS uvrA NC_009617.1 5694820 5697645 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(5694820..5697645) Clostridium beijerinckii NCIMB 8052 5296015 YP_001311926.1 CDS Cbei_4864 NC_009617.1 5697722 5699695 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(5697722..5699695) Clostridium beijerinckii NCIMB 8052 5296016 YP_001311927.1 CDS Cbei_4865 NC_009617.1 5699972 5701330 R KEGG: cno:NT01CX_1273 membrane protein containing C-terminal PDZ domain; PDZ domain-containing protein complement(5699972..5701330) Clostridium beijerinckii NCIMB 8052 5296017 YP_001311928.1 CDS Cbei_4866 NC_009617.1 5701342 5702604 R TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: cpe:CPE0301 probable carboxyl-terminal proteinase; carboxyl-terminal protease complement(5701342..5702604) Clostridium beijerinckii NCIMB 8052 5296018 YP_001311929.1 CDS Cbei_4867 NC_009617.1 5702766 5703656 R PFAM: protein of unknown function DUF214; KEGG: cpf:CPF_0297 cell division protein; hypothetical protein complement(5702766..5703656) Clostridium beijerinckii NCIMB 8052 5296019 YP_001311930.1 CDS Cbei_4868 NC_009617.1 5703646 5704332 R TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpr:CPR_0291 cell division ATP-binding protein FtsE; cell division ATP-binding protein FtsE complement(5703646..5704332) Clostridium beijerinckii NCIMB 8052 5296020 YP_001311931.1 CDS Cbei_4869 NC_009617.1 5704459 5705313 R PFAM: protein of unknown function DUF161; KEGG: cac:CAC0496 uncharacterized conserved protein, YitT family; hypothetical protein complement(5704459..5705313) Clostridium beijerinckii NCIMB 8052 5296021 YP_001311932.1 CDS Cbei_4870 NC_009617.1 5705476 5706420 R PFAM: Transketolase, central region; Transketolase domain protein; KEGG: cpr:CPR_0288 transketolase; transketolase, central region complement(5705476..5706420) Clostridium beijerinckii NCIMB 8052 5296022 YP_001311933.1 CDS Cbei_4871 NC_009617.1 5706420 5707241 R PFAM: Transketolase domain protein; KEGG: cpr:CPR_0287 transketolase; transketolase domain-containing protein complement(5706420..5707241) Clostridium beijerinckii NCIMB 8052 5296023 YP_001311934.1 CDS Cbei_4872 NC_009617.1 5707470 5707823 R PFAM: PemK family protein; KEGG: cpr:CPR_0286 PemK family protein; transcriptional modulator of MazE/toxin MazF complement(5707470..5707823) Clostridium beijerinckii NCIMB 8052 5296024 YP_001311935.1 CDS Cbei_4873 NC_009617.1 5707833 5708090 R KEGG: cpf:CPF_0290 hypothetical protein; hypothetical protein complement(5707833..5708090) Clostridium beijerinckii NCIMB 8052 5296025 YP_001311936.1 CDS Cbei_4874 NC_009617.1 5708317 5708949 R KEGG: cac:CAC0491 uncharacterized probably secreted protein, homolog of YDCC B.subtilis; hypothetical protein complement(5708317..5708949) Clostridium beijerinckii NCIMB 8052 5296026 YP_001311937.1 CDS Cbei_4875 NC_009617.1 5709015 5710523 R TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: hydroxyethylthiazole kinase; protein of unknown function UPF0031; YjeF-family N-terminal domain protein; KEGG: cpr:CPR_0283 carbohydrate kinase family protein; carbohydrate kinase complement(5709015..5710523) Clostridium beijerinckii NCIMB 8052 5296027 YP_001311938.1 CDS acpS NC_009617.1 5710523 5710894 R Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase complement(5710523..5710894) Clostridium beijerinckii NCIMB 8052 5296028 YP_001311939.1 CDS Cbei_4877 NC_009617.1 5710967 5711296 R KEGG: ctc:CTC02517 hypothetical protein; hypothetical protein complement(5710967..5711296) Clostridium beijerinckii NCIMB 8052 5296029 YP_001311940.1 CDS Cbei_4878 NC_009617.1 5712061 5712402 R TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cpr:CPR_0274 single-strand binding protein family; single-strand binding protein complement(5712061..5712402) Clostridium beijerinckii NCIMB 8052 5296030 YP_001311941.1 CDS Cbei_4879 NC_009617.1 5712502 5713356 R TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: cpf:CPF_0281 YihY family protein; ribonuclease BN complement(5712502..5713356) Clostridium beijerinckii NCIMB 8052 5296031 YP_001311942.1 CDS Cbei_4880 NC_009617.1 5713588 5714904 R PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase, NAD-binding; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase-like; KEGG: cno:NT01CX_1780 UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase complement(5713588..5714904) Clostridium beijerinckii NCIMB 8052 5296032 YP_001311943.1 CDS Cbei_4881 NC_009617.1 5715017 5715592 R KEGG: swo:Swol_0704 hexapeptide transferase family protein; hexapeptide transferase family protein complement(5715017..5715592) Clostridium beijerinckii NCIMB 8052 5296033 YP_001311944.1 CDS Cbei_4882 NC_009617.1 5715678 5716859 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: swo:Swol_0703 pyridoxal phosphate-dependent enzyme; glutamine--scyllo-inositol transaminase complement(5715678..5716859) Clostridium beijerinckii NCIMB 8052 5296034 YP_001311945.1 CDS Cbei_4883 NC_009617.1 5717097 5719382 R PFAM: DEAD_2 domain protein; SMART: DEXDc2; helicase c2; KEGG: cno:NT01CX_0936 DNA repair helicase, truncation; DEAD/DEAH box helicase complement(5717097..5719382) Clostridium beijerinckii NCIMB 8052 5296035 YP_001311946.1 CDS Cbei_4884 NC_009617.1 5719539 5720129 R PFAM: Domain of unknown function DUF1836; KEGG: cpf:CPF_0278 hypothetical protein; hypothetical protein complement(5719539..5720129) Clostridium beijerinckii NCIMB 8052 5296036 YP_001311947.1 CDS Cbei_4885 NC_009617.1 5720680 5720925 D TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: cpr:CPR_0268 transcriptional regulator, AbrB family; AbrB family transcriptional regulator 5720680..5720925 Clostridium beijerinckii NCIMB 8052 5296037 YP_001311948.1 CDS Cbei_4886 NC_009617.1 5721029 5721874 R PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: cno:NT01CX_0752 tetrapyrrole (corrin/porphyrin) methylase; uroporphyrin-III C/tetrapyrrole methyltransferase complement(5721029..5721874) Clostridium beijerinckii NCIMB 8052 5296038 YP_001311949.1 CDS Cbei_4887 NC_009617.1 5721876 5722625 R PFAM: methyltransferase small; KEGG: cpe:CPE0279 hypothetical protein; methyltransferase small complement(5721876..5722625) Clostridium beijerinckii NCIMB 8052 5296039 YP_001311950.1 CDS Cbei_4888 NC_009617.1 5722817 5724055 R PFAM: NLP/P60 protein; KEGG: cpf:CPF_0274 SagA protein; NLP/P60 protein complement(5722817..5724055) Clostridium beijerinckii NCIMB 8052 5296040 YP_001311951.1 CDS Cbei_4889 NC_009617.1 5724709 5725353 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cac:CAC3231 predicted phosphatase, HAD superfamily; HAD family hydrolase 5724709..5725353 Clostridium beijerinckii NCIMB 8052 5296441 YP_001311952.1 CDS Cbei_4890 NC_009617.1 5725644 5726390 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: cpf:CPF_0262 peptidyl-prolyl cis-trans isomerase family protein; PpiC-type peptidyl-prolyl cis-trans isomerase complement(5725644..5726390) Clostridium beijerinckii NCIMB 8052 5296042 YP_001311953.1 CDS Cbei_4891 NC_009617.1 5726571 5727248 D Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 5726571..5727248 Clostridium beijerinckii NCIMB 8052 5296043 YP_001311954.1 CDS Cbei_4892 NC_009617.1 5727389 5727799 D KEGG: cpr:CPR_1540 hypothetical protein; hypothetical protein 5727389..5727799 Clostridium beijerinckii NCIMB 8052 5296044 YP_001311955.1 CDS Cbei_4893 NC_009617.1 5728408 5729139 D Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 5728408..5729139 Clostridium beijerinckii NCIMB 8052 5296443 YP_001311956.1 CDS Cbei_4894 NC_009617.1 5729311 5730543 R TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: cpf:CPF_0130 CinA family protein; competence damage-inducible protein A complement(5729311..5730543) Clostridium beijerinckii NCIMB 8052 5296046 YP_001311957.1 CDS Cbei_4895 NC_009617.1 5731028 5731981 R TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein; KEGG: cpr:CPR_0098 glucose kinase; ROK family glucokinase complement(5731028..5731981) Clostridium beijerinckii NCIMB 8052 5296047 YP_001311958.1 CDS Cbei_4896 NC_009617.1 5732093 5732329 R KEGG: cpr:CPR_0097 hypothetical protein; hypothetical protein complement(5732093..5732329) Clostridium beijerinckii NCIMB 8052 5296048 YP_001311959.1 CDS Cbei_4897 NC_009617.1 5732570 5734651 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(5732570..5734651) Clostridium beijerinckii NCIMB 8052 5296049 YP_001311960.1 CDS Cbei_4898 NC_009617.1 5734924 5736423 D KEGG: cac:CAC1982 predicted membrane protein; hypothetical protein 5734924..5736423 Clostridium beijerinckii NCIMB 8052 5296050 YP_001311961.1 CDS Cbei_4899 NC_009617.1 5736730 5737182 R PFAM: VanZ family protein; KEGG: cpr:CPR_0088 acetobutylicum phosphotransbutyrylase; VanZ family protein complement(5736730..5737182) Clostridium beijerinckii NCIMB 8052 5296051 YP_001311962.1 CDS Cbei_4900 NC_009617.1 5737228 5737665 R KEGG: cpr:CPR_0085 hypothetical protein; hypothetical protein complement(5737228..5737665) Clostridium beijerinckii NCIMB 8052 5296052 YP_001311963.1 CDS Cbei_4901 NC_009617.1 5743527 5744333 R PFAM: protein of unknown function DUF299; KEGG: cpe:CPE2242 hypothetical protein; hypothetical protein complement(5743527..5744333) Clostridium beijerinckii NCIMB 8052 5296448 YP_001311964.1 CDS Cbei_4902 NC_009617.1 5744557 5745306 D KEGG: cpe:CPE2244 lipoprotein signal peptidase; lipoprotein signal peptidase 5744557..5745306 Clostridium beijerinckii NCIMB 8052 5296054 YP_001311965.1 CDS Cbei_4903 NC_009617.1 5745853 5746800 R TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; KEGG: baa:BA_0106 lactate/malate dehydrogenase, NAD binding domain; L-lactate dehydrogenase complement(5745853..5746800) Clostridium beijerinckii NCIMB 8052 5296450 YP_001311966.1 CDS Cbei_4904 NC_009617.1 5752779 5753891 R TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; PFAM: Nucleotidyl transferase; KEGG: cpe:CPE0069 glycogen biosynthesis protein; glucose-1-phosphate adenylyltransferase, GlgD subunit complement(5752779..5753891) Clostridium beijerinckii NCIMB 8052 5296454 YP_001311967.1 CDS glgC NC_009617.1 5753917 5755077 R catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase complement(5753917..5755077) Clostridium beijerinckii NCIMB 8052 5296057 YP_001311968.1 CDS Cbei_4906 NC_009617.1 5755354 5757180 R PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: cpr:CPR_0084 pullulanase; alpha amylase complement(5755354..5757180) Clostridium beijerinckii NCIMB 8052 5296058 YP_001311969.1 CDS Cbei_4907 NC_009617.1 5757194 5759629 R TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase, family 35; KEGG: cpr:CPR_0083 glycogen phosphorylase; glycogen/starch/alpha-glucan phosphorylase complement(5757194..5759629) Clostridium beijerinckii NCIMB 8052 5296059 YP_001311970.1 CDS glgA NC_009617.1 5759663 5761102 R catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase complement(5759663..5761102) Clostridium beijerinckii NCIMB 8052 5296060 YP_001311971.1 CDS Cbei_4909 NC_009617.1 5761198 5762835 R TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase, catalytic region; alpha amylase, C-terminal all-beta; SMART: alpha amylase, catalytic sub domain; KEGG: cpf:CPF_1840 1,4-alpha-glucan branching enzyme; 1,4-alpha-glucan branching protein complement(5761198..5762835) Clostridium beijerinckii NCIMB 8052 5296061 YP_001311972.1 CDS Cbei_4910 NC_009617.1 5775717 5776664 R PFAM: GCN5-related N-acetyltransferase; KEGG: cpr:CPR_0069 acetyltransferase, GNAT family; N-acetyltransferase GCN5 complement(5775717..5776664) Clostridium beijerinckii NCIMB 8052 5296460 YP_001311973.1 CDS Cbei_4911 NC_009617.1 5777279 5778100 R TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: msu:MS2377 PTS system, mannose-specific IID component; PTS system mannose/fructose/sorbose family transporter subunit IID complement(5777279..5778100) Clostridium beijerinckii NCIMB 8052 5296063 YP_001311974.1 CDS Cbei_4912 NC_009617.1 5778122 5778913 R TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS, sorbose-specific IIC subunit; KEGG: msu:MS2378 PTS system, mannose-specific IIC component; PTS system mannose/fructose/sorbose family transporter subunit IIC complement(5778122..5778913) Clostridium beijerinckii NCIMB 8052 5296064 YP_001311975.1 CDS Cbei_4913 NC_009617.1 5779063 5779554 R TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; PFAM: PTS system sorbose subfamily IIB component; KEGG: stm:STM1830 Sugar Specific PTS family, mannose-specific enzyme IIAB; PTS system mannose/fructose/sorbose family transporter subunit IIB complement(5779063..5779554) Clostridium beijerinckii NCIMB 8052 5296065 YP_001311976.1 CDS Cbei_4914 NC_009617.1 5779629 5780051 R TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA subunit; PFAM: PTS system fructose subfamily IIA component; KEGG: lwe:lwe0743 sugar phosphotransferasesystem component IIA; PTS system mannose/fructose/sorbose family transporter subunit IIA complement(5779629..5780051) Clostridium beijerinckii NCIMB 8052 5296066 YP_001311977.1 CDS Cbei_4915 NC_009617.1 5780266 5783064 R PFAM: sigma-54 factor, interaction domain-containing protein; PTS system fructose subfamily IIA component; PRD domain protein; SMART: ATPase AAA; KEGG: lwe:lwe0744 transcriptional regulator LevR family; sigma-54 factor interaction domain-containing protein complement(5780266..5783064) Clostridium beijerinckii NCIMB 8052 5296067 YP_001311978.1 CDS Cbei_4916 NC_009617.1 5783245 5784006 R PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: cpr:CPR_0067 HesA/MoeB/ThiF family protein; UBA/THIF-type NAD/FAD binding protein complement(5783245..5784006) Clostridium beijerinckii NCIMB 8052 5296068 YP_001311979.1 CDS Cbei_4917 NC_009617.1 5784440 5785132 D enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 5784440..5785132 Clostridium beijerinckii NCIMB 8052 5296069 YP_001311980.1 CDS Cbei_4918 NC_009617.1 5785244 5787250 R PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: cac:CAC2547 possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain; methyl-accepting chemotaxis sensory transducer complement(5785244..5787250) Clostridium beijerinckii NCIMB 8052 5296070 YP_001311981.1 CDS Cbei_4919 NC_009617.1 5787639 5788460 R PFAM: nitroreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cac:CAC3359 nitroreductase fused to ferredoxin domain; nitroreductase complement(5787639..5788460) Clostridium beijerinckii NCIMB 8052 5296071 YP_001311982.1 CDS Cbei_4920 NC_009617.1 5788541 5789206 R TetR family transcriptional regulator complement(5788541..5789206) Clostridium beijerinckii NCIMB 8052 5296072 YP_001311983.1 CDS Cbei_4921 NC_009617.1 5789342 5790682 R PFAM: Ion transport 2 domain protein; KEGG: vvy:VV0782 potassium channel protein; Ion transport 2 domain-containing protein complement(5789342..5790682) Clostridium beijerinckii NCIMB 8052 5296073 YP_001311984.1 CDS Cbei_4922 NC_009617.1 5790843 5791766 D KEGG: ctc:CTC02189 hypothetical protein; hypothetical protein 5790843..5791766 Clostridium beijerinckii NCIMB 8052 5296074 YP_001311985.1 CDS Cbei_4923 NC_009617.1 5792133 5792564 D PFAM: regulatory protein, MarR; KEGG: bat:BAS2992 transcriptional regulator, MarR family; MarR family transcriptional regulator 5792133..5792564 Clostridium beijerinckii NCIMB 8052 5296075 YP_001311986.1 CDS Cbei_4924 NC_009617.1 5792584 5793789 D PFAM: major facilitator superfamily MFS_1; KEGG: lmf:LMOf2365_2817 major facilitator family transporter; major facilitator superfamily transporter 5792584..5793789 Clostridium beijerinckii NCIMB 8052 5296076 YP_001311987.1 CDS Cbei_4925 NC_009617.1 5794715 5796460 R KEGG: cno:NT01CX_1207 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(5794715..5796460) Clostridium beijerinckii NCIMB 8052 5296077 YP_001311988.1 CDS Cbei_4926 NC_009617.1 5797173 5798429 R PFAM: uncharacterised conserved protein UCP033563; KEGG: cac:CAC0016 related to HTH domain of SpoOJ/ParA/ParB/repB family, involved in chromosome partitioning; hypothetical protein complement(5797173..5798429) Clostridium beijerinckii NCIMB 8052 5296078 YP_001311989.1 CDS Cbei_4927 NC_009617.1 5798447 5799355 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: cac:CAC0015 D-3-phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit complement(5798447..5799355) Clostridium beijerinckii NCIMB 8052 5296079 YP_001311990.1 CDS Cbei_4928 NC_009617.1 5800038 5801693 R PFAM: extracellular solute-binding protein, family 5; KEGG: cac:CAC3634 oligopeptide ABC transporter periplasmic protein component; extracellular solute-binding protein complement(5800038..5801693) Clostridium beijerinckii NCIMB 8052 5296080 YP_001311991.1 CDS Cbei_4929 NC_009617.1 5801841 5802824 R TIGRFAM: peptide ABC transporter ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter C-terminal domain protein; SMART: ATPase AAA; KEGG: cac:CAC3635 oligopeptide ABC transporter ATPase component; peptide ABC transporter ATPase complement(5801841..5802824) Clostridium beijerinckii NCIMB 8052 5296081 YP_001311992.1 CDS Cbei_4930 NC_009617.1 5802824 5803831 R TIGRFAM: peptide ABC transporter ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter C-terminal domain protein; SMART: ATPase AAA; KEGG: cac:CAC3642 oligopeptide ABC transporter ATPase component; peptide ABC transporter ATPase complement(5802824..5803831) Clostridium beijerinckii NCIMB 8052 5296082 YP_001311993.1 CDS Cbei_4931 NC_009617.1 5803848 5804792 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CAC3643 oligopeptide ABC transporter permease component; binding-protein-dependent transport system inner membrane protein complement(5803848..5804792) Clostridium beijerinckii NCIMB 8052 5296083 YP_001311994.1 CDS Cbei_4932 NC_009617.1 5804806 5805732 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CAC3644 oligopeptide ABC transporter permease component; binding-protein-dependent transport system inner membrane protein complement(5804806..5805732) Clostridium beijerinckii NCIMB 8052 5296084 YP_001311995.1 CDS Cbei_4933 NC_009617.1 5806307 5807302 R PFAM: iron-containing alcohol dehydrogenase; KEGG: cac:CAC1574 NAD-dependent 4-hydroxybutyrate dehydrogenase; iron-containing alcohol dehydrogenase complement(5806307..5807302) Clostridium beijerinckii NCIMB 8052 5296085 YP_001311996.1 CDS Cbei_4934 NC_009617.1 5807365 5808756 R catalyzes the formation of 4-aminobutyraldehyde from putrescine and 2-oxoglutarate; putrescine--2-oxoglutarate aminotransferase complement(5807365..5808756) Clostridium beijerinckii NCIMB 8052 5296086 YP_001311997.1 CDS Cbei_4935 NC_009617.1 5809068 5809820 D PFAM: LuxR family transcriptional regulator; KEGG: mva:Mvan_5474 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 5809068..5809820 Clostridium beijerinckii NCIMB 8052 5296087 YP_001311998.1 CDS Cbei_4936 NC_009617.1 5810066 5811547 R PFAM: aldehyde dehydrogenase; KEGG: lpn:lpg0238 glycine betaine aldehyde dehydrogenase; aldehyde dehydrogenase complement(5810066..5811547) Clostridium beijerinckii NCIMB 8052 5296088 YP_001311999.1 CDS Cbei_4937 NC_009617.1 5811826 5813205 R PFAM: amidohydrolase; Amidohydrolase 3; KEGG: pab:PAB0090 D-aminoacylase (aspartate, glutamate etc); amidohydrolase 3 complement(5811826..5813205) Clostridium beijerinckii NCIMB 8052 5296089 YP_001312000.1 CDS Cbei_4938 NC_009617.1 5813304 5814104 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rxy:Rxyl_2915 binding-protein-dependent transport systems inner membrane component; ornithine carbamoyltransferase complement(5813304..5814104) Clostridium beijerinckii NCIMB 8052 5296090 YP_001312001.1 CDS Cbei_4939 NC_009617.1 5814106 5814969 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bat:BAS1200 spermidine/putrescine ABC transporter permease; binding-protein-dependent transport system inner membrane protein complement(5814106..5814969) Clostridium beijerinckii NCIMB 8052 5296091 YP_001312002.1 CDS Cbei_4940 NC_009617.1 5814982 5816109 R TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter; Transport-associated OB domain protein; SMART: ATPase AAA; KEGG: mkm:Mkms_2612 spermidine/putrescine ABC transporter ATPase subunit; spermidine/putrescine ABC transporter ATPase complement(5814982..5816109) Clostridium beijerinckii NCIMB 8052 5296092 YP_001312003.1 CDS Cbei_4941 NC_009617.1 5816141 5817235 R PFAM: extracellular solute-binding protein, family 1; KEGG: sth:STH468 spermidine/putrescine ABC transporter spermidine/putrescine-binding protein; extracellular solute-binding protein complement(5816141..5817235) Clostridium beijerinckii NCIMB 8052 5296093 YP_001312004.1 CDS Cbei_4942 NC_009617.1 5817366 5817713 R PFAM: nitrogen regulatory protein P-II; KEGG: mta:Moth_0193 nitrogen regulatory protein P-II (GlnB, GlnK); nitrogen regulatory protein P-II complement(5817366..5817713) Clostridium beijerinckii NCIMB 8052 5296094 YP_001312005.1 CDS Cbei_4943 NC_009617.1 5817880 5818641 R PFAM: LuxR family transcriptional regulator; KEGG: sil:SPO1488 transcriptional regulator, LuxR family; response regulator receiver protein complement(5817880..5818641) Clostridium beijerinckii NCIMB 8052 5296095 YP_001312006.1 CDS Cbei_4944 NC_009617.1 5818861 5819037 R KEGG: cpr:CPR_0061 hypothetical protein; hypothetical protein complement(5818861..5819037) Clostridium beijerinckii NCIMB 8052 5296096 YP_001312007.1 CDS Cbei_4945 NC_009617.1 5819184 5821214 R PFAM: peptidase M13, neprilysin; peptidase M13; KEGG: mfl:Mfl241 membrane metallo endopeptidase; endothelin-converting protein 1 complement(5819184..5821214) Clostridium beijerinckii NCIMB 8052 5296097 YP_001312008.1 CDS Cbei_4946 NC_009617.1 5821358 5822632 R PFAM: cell wall binding repeat-containing protein; CHAP domain containing protein; SH3, type 3 domain protein; SMART: SH3 domain protein domain protein; KEGG: cpf:CPF_0550 cell wall binding repeat domain protein; SH3 type 3 domain-containing protein complement(5821358..5822632) Clostridium beijerinckii NCIMB 8052 5296098 YP_001312009.1 CDS Cbei_4947 NC_009617.1 5822976 5823260 R KEGG: cno:NT01CX_0822 sigma-K factor processing regulatory protein BofA; sigma-K factor processing regulatory protein BofA complement(5822976..5823260) Clostridium beijerinckii NCIMB 8052 5296099 YP_001312010.1 CDS Cbei_4948 NC_009617.1 5823266 5823544 R KEGG: cpf:CPF_0055 hypothetical protein; hypothetical protein complement(5823266..5823544) Clostridium beijerinckii NCIMB 8052 5296100 YP_001312011.1 CDS recR NC_009617.1 5823759 5824358 R involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR complement(5823759..5824358) Clostridium beijerinckii NCIMB 8052 5296101 YP_001312012.1 CDS Cbei_4950 NC_009617.1 5824467 5824841 R PFAM: conserved hypothetical protein 103; KEGG: cac:CAC0126 uncharacterized conserved protein, YbaB family; hypothetical protein complement(5824467..5824841) Clostridium beijerinckii NCIMB 8052 5296102 YP_001312013.1 CDS Cbei_4951 NC_009617.1 5824894 5826540 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau complement(5824894..5826540) Clostridium beijerinckii NCIMB 8052 5296103 YP_001312014.1 CDS thyA NC_009617.1 5826839 5827630 D ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 5826839..5827630 Clostridium beijerinckii NCIMB 8052 5296104 YP_001312015.1 CDS Cbei_4953 NC_009617.1 5827699 5828190 D PFAM: dihydrofolate reductase region; KEGG: cpr:CPR_0054 dihydrofolate reductase; dihydrofolate reductase 5827699..5828190 Clostridium beijerinckii NCIMB 8052 5296105 YP_001312016.1 CDS Cbei_4954 NC_009617.1 5828317 5829201 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: cff:CFF8240_0924 fumarylacetoacetate hydrolase family protein; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 5828317..5829201 Clostridium beijerinckii NCIMB 8052 5296106 YP_001312017.1 CDS Cbei_4955 NC_009617.1 5829945 5830496 R KEGG: ctc:CTC00989 hypothetical protein; hypothetical protein complement(5829945..5830496) Clostridium beijerinckii NCIMB 8052 5296461 YP_001312018.1 CDS Cbei_4956 NC_009617.1 5830600 5831037 R may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB complement(5830600..5831037) Clostridium beijerinckii NCIMB 8052 5296108 YP_001312019.1 CDS Cbei_4957 NC_009617.1 5831126 5831761 R TIGRFAM: integral membrane protein TIGR01906; PFAM: Integral membrane protein 1906; KEGG: cpr:CPR_2277 integral membrane protein; hypothetical protein complement(5831126..5831761) Clostridium beijerinckii NCIMB 8052 5296109 YP_001312020.1 CDS Cbei_4958 NC_009617.1 5831896 5832363 R PFAM: CheC domain protein; KEGG: cac:CAC0586 CheX protein (uncharacterized ORF in chemotaxis operon); chemotaxis protein CheC complement(5831896..5832363) Clostridium beijerinckii NCIMB 8052 5296110 YP_001312021.1 CDS Cbei_4959 NC_009617.1 5832345 5833280 R PFAM: response regulator receiver; KEGG: cac:CAC0585 N-terminal CheY reciever domain fused to C-terminal uncharacterized CheX-like domain; response regulator receiver protein complement(5832345..5833280) Clostridium beijerinckii NCIMB 8052 5296111 YP_001312022.1 CDS Cbei_4960 NC_009617.1 5833573 5837013 R biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase complement(5833573..5837013) Clostridium beijerinckii NCIMB 8052 5296112 YP_001312023.1 CDS Cbei_4961 NC_009617.1 5837323 5837763 R TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: dsy:DSY1289 hypothetical protein; large conductance mechanosensitive channel protein complement(5837323..5837763) Clostridium beijerinckii NCIMB 8052 5296113 YP_001312024.1 CDS Cbei_4962 NC_009617.1 5838076 5838879 R PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: ctc:CTC01849 transcriptional regulatory protein; response regulator receiver protein complement(5838076..5838879) Clostridium beijerinckii NCIMB 8052 5296114 YP_001312025.1 CDS Cbei_4963 NC_009617.1 5838924 5840684 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase internal region; KEGG: bld:BLi00440 ABC transporter (permease); RBL00398; integral membrane sensor signal transduction histidine kinase complement(5838924..5840684) Clostridium beijerinckii NCIMB 8052 5296115 YP_001312026.1 CDS Cbei_4964 NC_009617.1 5840700 5842016 R PFAM: extracellular solute-binding protein, family 1; KEGG: bha:BH3680 multiple sugar transport system substrate-binding protein; extracellular solute-binding protein complement(5840700..5842016) Clostridium beijerinckii NCIMB 8052 5296116 YP_001312027.1 CDS Cbei_4965 NC_009617.1 5842140 5843852 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cno:NT01CX_0316 membrane assosiated methyl-accepting chemotaxis protein with HAMP domain; methyl-accepting chemotaxis sensory transducer complement(5842140..5843852) Clostridium beijerinckii NCIMB 8052 5296117 YP_001312028.1 CDS Cbei_4966 NC_009617.1 5844065 5845090 R KEGG: rle:pRL90225 binding periplasmic protein of ABC transporter; sugar ABC transporter periplasmic protein-like protein complement(5844065..5845090) Clostridium beijerinckii NCIMB 8052 5296118 YP_001312029.1 CDS Cbei_4967 NC_009617.1 5845209 5846225 R PFAM: inner-membrane translocator; KEGG: tte:TTE0205 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; monosaccharide-transporting ATPase complement(5845209..5846225) Clostridium beijerinckii NCIMB 8052 5296119 YP_001312030.1 CDS Cbei_4968 NC_009617.1 5846209 5847720 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: tte:TTE0763 ABC-type sugar (aldose) transport system, ATPase component; ABC transporter complement(5846209..5847720) Clostridium beijerinckii NCIMB 8052 5296120 YP_001312031.1 CDS Cbei_4969 NC_009617.1 5848327 5848845 R PFAM: nitroreductase; KEGG: cac:CAC2508 nitroreductase; nitroreductase complement(5848327..5848845) Clostridium beijerinckii NCIMB 8052 5296121 YP_001312032.1 CDS Cbei_4970 NC_009617.1 5848933 5849586 R PFAM: NADPH-dependent FMN reductase; KEGG: cac:CAC2520 multimeric flavodoxin (WrbA) domain containing protein; NADPH-dependent FMN reductase complement(5848933..5849586) Clostridium beijerinckii NCIMB 8052 5296122 YP_001312033.1 CDS Cbei_4971 NC_009617.1 5849721 5850083 D PFAM: helix-turn-helix, HxlR type; KEGG: cac:CAC0195 predicted transcriptional regulator; HxlR family transcriptional regulator 5849721..5850083 Clostridium beijerinckii NCIMB 8052 5296123 YP_001312034.1 CDS Cbei_4972 NC_009617.1 5850205 5851812 R PFAM: glycoside hydrolase, family 43; KEGG: oih:OB3125 xylan 1,4-beta-xylosidase; alpha-N-arabinofuranosidase complement(5850205..5851812) Clostridium beijerinckii NCIMB 8052 5296124 YP_001312035.1 CDS Cbei_4973 NC_009617.1 5852015 5852992 R PFAM: glycoside hydrolase, family 43; KEGG: pat:Patl_3728 alpha-L-arabinofuranosidase; alpha-N-arabinofuranosidase complement(5852015..5852992) Clostridium beijerinckii NCIMB 8052 5296125 YP_001312036.1 CDS Cbei_4974 NC_009617.1 5853088 5855217 R PFAM: glycoside hydrolase, family 3 domain protein; KEGG: pat:Patl_0825 beta-glucosidase; glycoside hydrolase family protein complement(5853088..5855217) Clostridium beijerinckii NCIMB 8052 5296126 YP_001312037.1 CDS Cbei_4975 NC_009617.1 5855368 5856138 D PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: cpr:CPR_1432 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 5855368..5856138 Clostridium beijerinckii NCIMB 8052 5296127 YP_001312038.1 CDS Cbei_4976 NC_009617.1 5856310 5857023 D PFAM: helix-turn-helix protein RpiR; KEGG: cac:CAC3424 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 5856310..5857023 Clostridium beijerinckii NCIMB 8052 5296128 YP_001312039.1 CDS Cbei_4977 NC_009617.1 5857250 5858791 D TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: cac:CAC3425 PTS system, (possibly glucose-specific) IIBC component; PTS system glucose-like transporter subunit IIB 5857250..5858791 Clostridium beijerinckii NCIMB 8052 5296129 YP_001312040.1 CDS Cbei_4978 NC_009617.1 5858813 5860150 D PFAM: glycoside hydrolase, family 4; KEGG: cac:CAC3426 6-phospho-alpha-glucosidase; glycoside hydrolase 5858813..5860150 Clostridium beijerinckii NCIMB 8052 5296130 YP_001312041.1 CDS Cbei_4979 NC_009617.1 5861058 5861216 R hypothetical protein complement(5861058..5861216) Clostridium beijerinckii NCIMB 8052 5296131 YP_001312042.1 CDS Cbei_4980 NC_009617.1 5861550 5862998 R TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC3668 MDR-type permease; EmrB/QacA family drug resistance transporter complement(5861550..5862998) Clostridium beijerinckii NCIMB 8052 5296132 YP_001312043.1 CDS Cbei_4981 NC_009617.1 5863052 5863495 R PFAM: regulatory protein, MarR; KEGG: cac:CAC3669 transcriptional regulator, MarR/EmrR family; MarR family transcriptional regulator complement(5863052..5863495) Clostridium beijerinckii NCIMB 8052 5296133 YP_001312044.1 CDS Cbei_4982 NC_009617.1 5864781 5865257 R TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease, EIIA 1 domain; KEGG: bsu:BG11450 PTS glucose-specific enzyme IIA component; PTS system glucose subfamily transporter subunit IIA complement(5864781..5865257) Clostridium beijerinckii NCIMB 8052 5296134 YP_001312045.1 CDS Cbei_4983 NC_009617.1 5865268 5866824 R TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: bcl:ABC0713 PTS system, glucose-specific enzyme II, ABC component; PTS system glucose-like transporter subunit IIB complement(5865268..5866824) Clostridium beijerinckii NCIMB 8052 5296135 YP_001312046.1 CDS Cbei_4984 NC_009617.1 5866915 5868237 R PFAM: glycoside hydrolase, family 4; KEGG: bcl:ABC2078 maltose-6'-phosphate glucosidase; glycoside hydrolase complement(5866915..5868237) Clostridium beijerinckii NCIMB 8052 5296136 YP_001312047.1 CDS Cbei_4985 NC_009617.1 5868548 5869291 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: cac:CAC0191 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 5868548..5869291 Clostridium beijerinckii NCIMB 8052 5296137 YP_001312048.1 CDS Cbei_4986 NC_009617.1 5869734 5870429 R PFAM: cell wall binding repeat-containing protein; KEGG: spd:SPD_0126 pneumococcal surface protein A; cell wall binding repeat-containing protein complement(5869734..5870429) Clostridium beijerinckii NCIMB 8052 5296138 YP_001312049.1 CDS Cbei_4987 NC_009617.1 5870614 5870916 D hypothetical protein 5870614..5870916 Clostridium beijerinckii NCIMB 8052 5296139 YP_001312050.1 CDS Cbei_4988 NC_009617.1 5870979 5871806 R KEGG: syf:Synpcc7942_0761 hypothetical protein; hypothetical protein complement(5870979..5871806) Clostridium beijerinckii NCIMB 8052 5296140 YP_001312051.1 CDS Cbei_4989 NC_009617.1 5872554 5872940 R hypothetical protein complement(5872554..5872940) Clostridium beijerinckii NCIMB 8052 5296141 YP_001312052.1 CDS Cbei_4990 NC_009617.1 5872941 5873693 R TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: cya:CYA_2410 RNA polymerase sigma factor RpoD; RNA polymerase sigma-32 subunit RpoH complement(5872941..5873693) Clostridium beijerinckii NCIMB 8052 5296142 YP_001312053.1 CDS Cbei_4991 NC_009617.1 5873735 5875438 R TIGRFAM: phage minor structural protein; KEGG: cno:NT01CX_2159 phage endopeptidase; phage minor structural protein complement(5873735..5875438) Clostridium beijerinckii NCIMB 8052 5296143 YP_001312054.1 CDS Cbei_4992 NC_009617.1 5875884 5876441 R KEGG: pfa:PF11_0207 hypothetical protein; hypothetical protein complement(5875884..5876441) Clostridium beijerinckii NCIMB 8052 5296144 YP_001312055.1 CDS Cbei_4993 NC_009617.1 5876463 5876705 R hypothetical protein complement(5876463..5876705) Clostridium beijerinckii NCIMB 8052 5296145 YP_001312056.1 CDS Cbei_4994 NC_009617.1 5877062 5878519 R KEGG: tte:TTE2242 transposase; transposase complement(5877062..5878519) Clostridium beijerinckii NCIMB 8052 5296146 YP_001312057.1 CDS Cbei_4995 NC_009617.1 5878691 5878969 D KEGG: sao:SAOUHSC_02218 hypothetical protein; hypothetical protein 5878691..5878969 Clostridium beijerinckii NCIMB 8052 5296147 YP_001312058.1 CDS Cbei_4996 NC_009617.1 5879778 5880521 R PFAM: helix-turn-helix domain protein; KEGG: gfo:orf2614 HTH_3 family transcriptional regulator protein; helix-turn-helix domain-containing protein complement(5879778..5880521) Clostridium beijerinckii NCIMB 8052 5296148 YP_001312059.1 CDS Cbei_4997 NC_009617.1 5880662 5880865 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 5880662..5880865 Clostridium beijerinckii NCIMB 8052 5296149 YP_001312060.1 CDS Cbei_4998 NC_009617.1 5881400 5883247 D KEGG: bcl:ABC1368 hypothetical protein; ATPase-like protein 5881400..5883247 Clostridium beijerinckii NCIMB 8052 5296150 YP_001312061.1 CDS Cbei_4999 NC_009617.1 5883363 5883656 D hypothetical protein 5883363..5883656 Clostridium beijerinckii NCIMB 8052 5296151 YP_001312062.1 CDS Cbei_5000 NC_009617.1 5883667 5884017 D hypothetical protein 5883667..5884017 Clostridium beijerinckii NCIMB 8052 5296152 YP_001312063.1 CDS Cbei_5001 NC_009617.1 5884369 5885340 R PFAM: phage integrase family protein; KEGG: cpe:CPE1095 probable integrase/recombinase; phage integrase family protein complement(5884369..5885340) Clostridium beijerinckii NCIMB 8052 5296153 YP_001312064.1 CDS Cbei_5002 NC_009617.1 5885355 5886293 R PFAM: phage integrase family protein; KEGG: gka:GK2913 integrase/recombinase; phage integrase family protein complement(5885355..5886293) Clostridium beijerinckii NCIMB 8052 5296154 YP_001312065.1 CDS Cbei_5003 NC_009617.1 5886777 5887952 R PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: cac:CAC0877 cyclopropane fatty acid synthase; cyclopropane-fatty-acyl-phospholipid synthase complement(5886777..5887952) Clostridium beijerinckii NCIMB 8052 5296462 YP_001312066.1 CDS Cbei_5004 NC_009617.1 5888035 5888706 R PFAM: GntR family transcriptional regulator; GntR domain protein; Helix-turn-helix, type 11 domain protein; KEGG: cac:CAC2546 transcriptional regulator, FadR family; GntR family transcriptional regulator complement(5888035..5888706) Clostridium beijerinckii NCIMB 8052 5296156 YP_001312067.1 CDS Cbei_5005 NC_009617.1 5888728 5889315 R KEGG: cac:CAC0610 hypothetical protein; hypothetical protein complement(5888728..5889315) Clostridium beijerinckii NCIMB 8052 5296157 YP_001312068.1 CDS Cbei_5006 NC_009617.1 5889332 5890036 R PFAM: LrgB family protein; KEGG: cac:CAC0611 predicted membrane protein, YohK family; LrgB family protein complement(5889332..5890036) Clostridium beijerinckii NCIMB 8052 5296158 YP_001312069.1 CDS Cbei_5007 NC_009617.1 5890033 5890383 R PFAM: LrgA family protein; KEGG: cac:CAC0612 predicted membrane protein YohJ family; LrgA family protein complement(5890033..5890383) Clostridium beijerinckii NCIMB 8052 5296159 YP_001312070.1 CDS Cbei_5008 NC_009617.1 5890672 5891121 R PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: cac:CAC0123 cytosine deaminase; zinc-binding CMP/dCMP deaminase complement(5890672..5891121) Clostridium beijerinckii NCIMB 8052 5296160 YP_001312071.1 CDS Cbei_5009 NC_009617.1 5891336 5892274 R PFAM: PfkB domain protein; KEGG: cpf:CPF_1782 fructokinase; ribokinase-like domain-containing protein complement(5891336..5892274) Clostridium beijerinckii NCIMB 8052 5296161 YP_001312072.1 CDS Cbei_5010 NC_009617.1 5892267 5893724 R TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32, N terminal domain protein; Glycosyl hydrolase family 32, C-terminal domain protein; SMART: glycoside hydrolase, family 32; KEGG: cpr:CPR_1511 sucrose-6-phosphate hydrolase; sucrose-6-phosphate hydrolase complement(5892267..5893724) Clostridium beijerinckii NCIMB 8052 5296162 YP_001312073.1 CDS Cbei_5011 NC_009617.1 5893746 5894738 R PFAM: LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; KEGG: cpe:CPE1533 probable transcriptional; periplasmic binding protein/LacI transcriptional regulator complement(5893746..5894738) Clostridium beijerinckii NCIMB 8052 5296163 YP_001312074.1 CDS Cbei_5012 NC_009617.1 5894928 5896283 R TIGRFAM: PTS system, sucrose-specific IIBC subunit; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: cpr:CPR_1513 PTS system, sucrose-specific IIBC component; PTS system sucrose-specific transporter subunit IIBC complement(5894928..5896283) Clostridium beijerinckii NCIMB 8052 5296164 YP_001312075.1 CDS Cbei_5013 NC_009617.1 5896632 5897105 R hypothetical protein complement(5896632..5897105) Clostridium beijerinckii NCIMB 8052 5296165 YP_001312076.1 CDS Cbei_5014 NC_009617.1 5897390 5897656 R hypothetical protein complement(5897390..5897656) Clostridium beijerinckii NCIMB 8052 5296166 YP_001312077.1 CDS Cbei_5015 NC_009617.1 5897649 5898542 R PFAM: StbA family protein; KEGG: hha:Hhal_1997 hypothetical protein; StbA family protein complement(5897649..5898542) Clostridium beijerinckii NCIMB 8052 5296167 YP_001312078.1 CDS Cbei_5016 NC_009617.1 5898779 5898964 R hypothetical protein complement(5898779..5898964) Clostridium beijerinckii NCIMB 8052 5296168 YP_001312079.1 CDS Cbei_5017 NC_009617.1 5899317 5899802 R TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease, EIIA 1 domain; KEGG: bsu:BG11450 PTS glucose-specific enzyme IIA component; PTS system glucose subfamily transporter subunit IIA complement(5899317..5899802) Clostridium beijerinckii NCIMB 8052 5296169 YP_001312080.1 CDS Cbei_5018 NC_009617.1 5899811 5901136 R PFAM: glycoside hydrolase, family 4; KEGG: lca:LSEI_2684 mannose-6-phosphate isomerase; glycoside hydrolase complement(5899811..5901136) Clostridium beijerinckii NCIMB 8052 5296170 YP_001312081.1 CDS Cbei_5019 NC_009617.1 5901197 5902792 R TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: eca:ECA3225 PTS system, alpha-glucoside-specific IIbc component; PTS system glucose-like transporter subunit IIB complement(5901197..5902792) Clostridium beijerinckii NCIMB 8052 5296171 YP_001312082.1 CDS Cbei_5020 NC_009617.1 5902921 5903679 R PFAM: sugar isomerase (SIS); KEGG: eca:ECA3228 RpiR-family transcriptional regulator; RpiR family transcriptional regulator complement(5902921..5903679) Clostridium beijerinckii NCIMB 8052 5296172 YP_001312083.1 CDS Cbei_5021 NC_009617.1 5904170 5904607 R hypothetical protein complement(5904170..5904607) Clostridium beijerinckii NCIMB 8052 5296173 YP_001312084.1 CDS Cbei_5022 NC_009617.1 5904675 5905625 R hypothetical protein complement(5904675..5905625) Clostridium beijerinckii NCIMB 8052 5296174 YP_001312085.1 CDS Cbei_5023 NC_009617.1 5906317 5906664 R hypothetical protein complement(5906317..5906664) Clostridium beijerinckii NCIMB 8052 5296175 YP_001312086.1 CDS Cbei_5024 NC_009617.1 5906840 5908006 R KEGG: cac:CAC3515 alpha/beta superfamily hydrolase (possible peptidase); alpha/beta fold family hydrolase complement(5906840..5908006) Clostridium beijerinckii NCIMB 8052 5296176 YP_001312087.1 CDS Cbei_5025 NC_009617.1 5908334 5909386 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cac:CAC3516 membrane-associated histidine kinase with HAMP domain; integral membrane sensor signal transduction histidine kinase complement(5908334..5909386) Clostridium beijerinckii NCIMB 8052 5296177 YP_001312088.1 CDS Cbei_5026 NC_009617.1 5909391 5910083 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cac:CAC3517 response regulator (CheY-like receiver domain and HTH-type DNA-binding domain); two component transcriptional regulator complement(5909391..5910083) Clostridium beijerinckii NCIMB 8052 5296178 YP_001312089.1 CDS Cbei_5027 NC_009617.1 5911453 5913843 R TIGRFAM: ATPase P; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: cno:NT01CX_2343 cation-transporting ATPase, E1-E2 family; ATPase P complement(5911453..5913843) Clostridium beijerinckii NCIMB 8052 5296463 YP_001312090.1 CDS Cbei_5028 NC_009617.1 5914074 5914796 D TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: cpr:CPR_1407 1-acyl-sn-glycerol-3-phosphate acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 5914074..5914796 Clostridium beijerinckii NCIMB 8052 5296180 YP_001312091.1 CDS Cbei_5029 NC_009617.1 5915019 5916596 D PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cpr:CPR_1389 ATP-dependent RNA helicase, DEAD/DEAH box family; DEAD/DEAH box helicase 5915019..5916596 Clostridium beijerinckii NCIMB 8052 5296181 YP_001312092.1 CDS Cbei_5030 NC_009617.1 5916744 5917256 R hypothetical protein complement(5916744..5917256) Clostridium beijerinckii NCIMB 8052 5296182 YP_001312093.1 CDS Cbei_5031 NC_009617.1 5917526 5919652 D PFAM: sigma-54 factor, interaction domain-containing protein; PTS system fructose subfamily IIA component; PRD domain protein; SMART: ATPase AAA; KEGG: lwe:lwe0744 transcriptional regulator LevR family; sigma-54 factor interaction domain-containing protein 5917526..5919652 Clostridium beijerinckii NCIMB 8052 5296183 YP_001312094.1 CDS Cbei_5032 NC_009617.1 5920145 5920777 R TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: cac:CAC3562 HD superfamily hydrolase; metal dependent phosphohydrolase complement(5920145..5920777) Clostridium beijerinckii NCIMB 8052 5296184 YP_001312095.1 CDS Cbei_5033 NC_009617.1 5921032 5921370 R PFAM: nitrogen regulatory protein P-II; KEGG: chy:CHY_0072 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(5921032..5921370) Clostridium beijerinckii NCIMB 8052 5296185 YP_001312096.1 CDS Cbei_5034 NC_009617.1 5921519 5922763 R TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: llm:llmg_0910 ammonium transporter AmtB; ammonium transporter complement(5921519..5922763) Clostridium beijerinckii NCIMB 8052 5296186 YP_001312097.1 CDS Cbei_5035 NC_009617.1 5923058 5924017 R PFAM: aminoglycoside phosphotransferase; KEGG: sus:Acid_2507 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(5923058..5924017) Clostridium beijerinckii NCIMB 8052 5296187 YP_001312098.1 CDS Cbei_5036 NC_009617.1 5924179 5925834 R TIGRFAM: sulfate transporter; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: cpr:CPR_1459 sulfate permease, SulP family; sulfate transporter complement(5924179..5925834) Clostridium beijerinckii NCIMB 8052 5296188 YP_001312099.1 CDS Cbei_5037 NC_009617.1 5926026 5926895 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(5926026..5926895) Clostridium beijerinckii NCIMB 8052 5296189 YP_001312100.1 CDS Cbei_5038 NC_009617.1 5927243 5928019 R PFAM: protein of unknown function DUF81; KEGG: tde:TDE0189 membrane protein; hypothetical protein complement(5927243..5928019) Clostridium beijerinckii NCIMB 8052 5296190 YP_001312101.1 CDS Cbei_5039 NC_009617.1 5933716 5934288 R with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate; glutamine amidotransferase subunit PdxT complement(5933716..5934288) Clostridium beijerinckii NCIMB 8052 5296466 YP_001312102.1 CDS Cbei_5040 NC_009617.1 5934290 5935159 R with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS complement(5934290..5935159) Clostridium beijerinckii NCIMB 8052 5296192 YP_001312103.1 CDS Cbei_5041 NC_009617.1 5935429 5936388 R PFAM: RNA methylase; KEGG: btk:BT9727_0797 methyltransferase; RNA methylase complement(5935429..5936388) Clostridium beijerinckii NCIMB 8052 5296193 YP_001312104.1 CDS Cbei_5042 NC_009617.1 5936824 5937978 D PFAM: Extracellular ligand-binding receptor; KEGG: gka:GK2980 branched chain amino acid ABC transporter (substrate-binding protein); extracellular ligand-binding receptor 5936824..5937978 Clostridium beijerinckii NCIMB 8052 5296194 YP_001312105.1 CDS Cbei_5043 NC_009617.1 5938004 5938879 D PFAM: inner-membrane translocator; KEGG: ssa:SSA_1728 ABC transporter membrane-spanning permease-branched chain amino acid transport; inner-membrane translocator 5938004..5938879 Clostridium beijerinckii NCIMB 8052 5296195 YP_001312106.1 CDS Cbei_5044 NC_009617.1 5938889 5939854 D PFAM: inner-membrane translocator; KEGG: mta:Moth_2500 inner-membrane translocator; inner-membrane translocator 5938889..5939854 Clostridium beijerinckii NCIMB 8052 5296196 YP_001312107.1 CDS Cbei_5045 NC_009617.1 5939859 5940617 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: chy:CHY_2229 high affinity branched-chain amino acid ABC transporter ATP-binding protein; ABC transporter 5939859..5940617 Clostridium beijerinckii NCIMB 8052 5296197 YP_001312108.1 CDS Cbei_5046 NC_009617.1 5940620 5941324 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: swo:Swol_2552 branched-chain amino acid ABC transporter (ATP-binding protein); ABC transporter 5940620..5941324 Clostridium beijerinckii NCIMB 8052 5296198 YP_001312109.1 CDS Cbei_5047 NC_009617.1 5941334 5941663 R hypothetical protein complement(5941334..5941663) Clostridium beijerinckii NCIMB 8052 5296199 YP_001312110.1 CDS Cbei_5048 NC_009617.1 5941746 5941952 R hypothetical protein complement(5941746..5941952) Clostridium beijerinckii NCIMB 8052 5296200 YP_001312111.1 CDS Cbei_5049 NC_009617.1 5942340 5942489 D KEGG: cpf:CPF_1306 hypothetical protein; hypothetical protein 5942340..5942489 Clostridium beijerinckii NCIMB 8052 5296201 YP_001312112.1 CDS hppA NC_009617.1 5942756 5944891 D pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 5942756..5944891 Clostridium beijerinckii NCIMB 8052 5296202 YP_001312113.1 CDS Cbei_5051 NC_009617.1 5945134 5945553 D PFAM: Protein of unknown function CGGC region; KEGG: mmp:MMP0536 hypothetical protein; hypothetical protein 5945134..5945553 Clostridium beijerinckii NCIMB 8052 5296203 YP_001312114.1 CDS Cbei_5052 NC_009617.1 5945595 5946485 R KEGG: cth:Cthe_1430 hypothetical protein; hypothetical protein complement(5945595..5946485) Clostridium beijerinckii NCIMB 8052 5296204 YP_001312115.1 CDS Cbei_5053 NC_009617.1 5946695 5947108 D TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: ctc:CTC00575 conserved protein (RRF2 family protein); BadM/Rrf2 family transcriptional regulator 5946695..5947108 Clostridium beijerinckii NCIMB 8052 5296205 YP_001312116.1 CDS Cbei_5054 NC_009617.1 5947221 5949095 D TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane; KEGG: cac:CAC0116 carbone-monoxide dehydrogenase, beta chain; carbon-monoxide dehydrogenase, catalytic subunit 5947221..5949095 Clostridium beijerinckii NCIMB 8052 5296206 YP_001312117.1 CDS Cbei_5055 NC_009617.1 5949355 5950554 R PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: ctc:CTC01386 flavoprotein; beta-lactamase domain-containing protein complement(5949355..5950554) Clostridium beijerinckii NCIMB 8052 5296207 YP_001312118.1 CDS Cbei_5056 NC_009617.1 5950597 5952501 R PFAM: Rubredoxin-type Fe(Cys)4 protein; acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; Electron transfer flavoprotein, alpha subunit-like; KEGG: ctc:CTC01387 acyl-coA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(5950597..5952501) Clostridium beijerinckii NCIMB 8052 5296208 YP_001312119.1 CDS Cbei_5057 NC_009617.1 5952950 5953429 R SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase complement(5952950..5953429) Clostridium beijerinckii NCIMB 8052 5296209 YP_001312120.1 CDS Cbei_5058 NC_009617.1 5953589 5955016 R TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cac:CAC3668 MDR-type permease; EmrB/QacA family drug resistance transporter complement(5953589..5955016) Clostridium beijerinckii NCIMB 8052 5296210 YP_001312121.1 CDS Cbei_5059 NC_009617.1 5955509 5957683 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: maq:Maqu_2916 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(5955509..5957683) Clostridium beijerinckii NCIMB 8052 5296211 YP_001312122.1 CDS Cbei_5060 NC_009617.1 5957962 5958465 R PFAM: SEC-C motif domain protein; KEGG: cpr:CPR_2613 sec-C domain protein; hypothetical protein complement(5957962..5958465) Clostridium beijerinckii NCIMB 8052 5296212 YP_001312123.1 CDS Cbei_5061 NC_009617.1 5958536 5959327 R PFAM: beta-lactamase domain protein; KEGG: cpf:CPF_2932 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein complement(5958536..5959327) Clostridium beijerinckii NCIMB 8052 5296213 YP_001312124.1 CDS Cbei_5062 NC_009617.1 5959354 5960619 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(5959354..5960619) Clostridium beijerinckii NCIMB 8052 5296214 YP_001312125.1 CDS Cbei_5063 NC_009617.1 5961005 5961544 D KEGG: cpe:CPE2607 hypothetical protein; hypothetical protein 5961005..5961544 Clostridium beijerinckii NCIMB 8052 5296215 YP_001312126.1 CDS Cbei_5064 NC_009617.1 5961830 5962306 D KEGG: cpr:CPR_2618 hypothetical protein; hypothetical protein 5961830..5962306 Clostridium beijerinckii NCIMB 8052 5296216 YP_001312127.1 CDS Cbei_5065 NC_009617.1 5962396 5962827 D PFAM: protein of unknown function DUF606; KEGG: cpf:CPF_2936 hypothetical protein; hypothetical protein 5962396..5962827 Clostridium beijerinckii NCIMB 8052 5296217 YP_001312128.1 CDS Cbei_5066 NC_009617.1 5962845 5963660 D PFAM: beta-lactamase domain protein; KEGG: bca:BCE_2277 hypothetical protein; beta-lactamase domain-containing protein 5962845..5963660 Clostridium beijerinckii NCIMB 8052 5296218 YP_001312129.1 CDS Cbei_5067 NC_009617.1 5963865 5965064 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: cpr:CPR_2620 subtilase family protein; peptidase S8/S53 subtilisin kexin sedolisin 5963865..5965064 Clostridium beijerinckii NCIMB 8052 5296219 YP_001312130.1 CDS Cbei_5068 NC_009617.1 5965373 5966371 D TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: cpr:CPR_2622 DNA replication protein DnaD; primosome subunit DnaD 5965373..5966371 Clostridium beijerinckii NCIMB 8052 5296220 YP_001312131.1 CDS Cbei_5069 NC_009617.1 5966364 5967344 D acts to load the DnaB helicase onto the initiation site during DNA replication; DNA replication protein DnaC 5966364..5967344 Clostridium beijerinckii NCIMB 8052 5296221 YP_001312132.1 CDS Cbei_5070 NC_009617.1 5968781 5969329 R KEGG: cpe:CPE2614 hypothetical protein; hypothetical protein complement(5968781..5969329) Clostridium beijerinckii NCIMB 8052 5296477 YP_001312133.1 CDS Cbei_5071 NC_009617.1 5969563 5970807 D PFAM: HI0933 family protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cpf:CPF_2952 conserved hypothetical protein TIGR00275; hypothetical protein 5969563..5970807 Clostridium beijerinckii NCIMB 8052 5296223 YP_001312134.1 CDS Cbei_5072 NC_009617.1 5970911 5971657 R PFAM: acyl-ACP thioesterase; KEGG: cno:NT01CX_0907 acyl-acyl carrier protein thioesterase; acyl-ACP thioesterase complement(5970911..5971657) Clostridium beijerinckii NCIMB 8052 5296224 YP_001312135.1 CDS Cbei_5073 NC_009617.1 5971958 5972140 R KEGG: cpr:CPR_2639 hypothetical protein; hypothetical protein complement(5971958..5972140) Clostridium beijerinckii NCIMB 8052 5296225 YP_001312136.1 CDS Cbei_5074 NC_009617.1 5972239 5973525 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(5972239..5973525) Clostridium beijerinckii NCIMB 8052 5296226 YP_001312137.1 CDS Cbei_5075 NC_009617.1 5973776 5974951 D PFAM: UBA/THIF-type NAD/FAD binding protein; malic protein domain protein; malic protein, NAD-binding; KEGG: chy:CHY_1369 NAD-dependent malic enzyme; malate dehydrogenase 5973776..5974951 Clostridium beijerinckii NCIMB 8052 5296227 YP_001312138.1 CDS Cbei_5076 NC_009617.1 5975304 5975837 D KEGG: cpe:CPE1522 hypothetical protein; hypothetical protein 5975304..5975837 Clostridium beijerinckii NCIMB 8052 5296228 YP_001312139.1 CDS Cbei_5077 NC_009617.1 5975900 5976700 R catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase complement(5975900..5976700) Clostridium beijerinckii NCIMB 8052 5296229 YP_001312140.1 CDS Cbei_5078 NC_009617.1 5976846 5977184 D hypothetical protein 5976846..5977184 Clostridium beijerinckii NCIMB 8052 5296230 YP_001312141.1 CDS Cbei_5079 NC_009617.1 5977291 5978628 R unwinds double stranded DNA; replicative DNA helicase complement(5977291..5978628) Clostridium beijerinckii NCIMB 8052 5296231 YP_001312142.1 CDS Cbei_5080 NC_009617.1 5978764 5980659 R TIGRFAM: Sporulation protease LonC; PFAM: magnesium chelatase, ChlI subunit; ATPase AAA, central domain protein; peptidase S16, lon domain protein; SMART: ATPase AAA; KEGG: cpr:CPR_2649 ATP-dependent protease; sporulation protease LonC complement(5978764..5980659) Clostridium beijerinckii NCIMB 8052 5296232 YP_001312143.1 CDS rplI NC_009617.1 5980672 5981118 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(5980672..5981118) Clostridium beijerinckii NCIMB 8052 5296233 YP_001312144.1 CDS Cbei_5082 NC_009617.1 5981122 5983062 R PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: cpr:CPR_2651 DHH family protein; phosphoesterase domain-containing protein complement(5981122..5983062) Clostridium beijerinckii NCIMB 8052 5296234 YP_001312145.1 CDS Cbei_5083 NC_009617.1 5983083 5983403 R KEGG: cno:NT01CX_0886 hypothetical protein; hypothetical protein complement(5983083..5983403) Clostridium beijerinckii NCIMB 8052 5296235 YP_001312146.1 CDS rpsR NC_009617.1 5983581 5983841 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(5983581..5983841) Clostridium beijerinckii NCIMB 8052 5296236 YP_001312147.1 CDS Cbei_5085 NC_009617.1 5983866 5984315 R TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cac:CAC3723 single strand DNA binding protein, SSB; single-strand binding protein complement(5983866..5984315) Clostridium beijerinckii NCIMB 8052 5296237 YP_001312148.1 CDS rpsF NC_009617.1 5984329 5984616 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(5984329..5984616) Clostridium beijerinckii NCIMB 8052 5296238 YP_001312149.1 CDS Cbei_5087 NC_009617.1 5984718 5984912 R PFAM: protein of unknown function DUF951; KEGG: cno:NT01CX_0882 hypothetical protein; hypothetical protein complement(5984718..5984912) Clostridium beijerinckii NCIMB 8052 5296239 YP_001312150.1 CDS Cbei_5088 NC_009617.1 5984912 5985835 R PFAM: MscS Mechanosensitive ion channel; KEGG: cpf:CPF_2980 mechanosensitive ion channel family protein; mechanosensitive ion channel protein MscS complement(5984912..5985835) Clostridium beijerinckii NCIMB 8052 5296240 YP_001312151.1 CDS Cbei_5089 NC_009617.1 5985851 5986093 R KEGG: cpf:CPF_2981 hypothetical protein; hypothetical protein complement(5985851..5986093) Clostridium beijerinckii NCIMB 8052 5296241 YP_001312152.1 CDS Cbei_5090 NC_009617.1 5986262 5986909 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: cno:NT01CX_0881 LysE type translocator; lysine exporter protein LysE/YggA 5986262..5986909 Clostridium beijerinckii NCIMB 8052 5296242 YP_001312153.1 CDS Cbei_5091 NC_009617.1 5986925 5988076 D TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase, class V; KEGG: cpf:CPF_2983 cysteine desulfurase family protein; cysteine desulfurase 5986925..5988076 Clostridium beijerinckii NCIMB 8052 5296243 YP_001312154.1 CDS Cbei_5092 NC_009617.1 5988243 5988830 D PFAM: protein of unknown function DUF1256; KEGG: cpr:CPR_2663 sporulation protein YyaC; hypothetical protein 5988243..5988830 Clostridium beijerinckii NCIMB 8052 5296244 YP_001312155.1 CDS Cbei_5093 NC_009617.1 5990555 5991058 R KEGG: cpf:CPF_2986 hypothetical protein; hypothetical protein complement(5990555..5991058) Clostridium beijerinckii NCIMB 8052 5296245 YP_001312156.1 CDS Cbei_5094 NC_009617.1 5991104 5991964 R TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: cno:NT01CX_0878 stage 0 sporulation protein J; parB-like partition protein complement(5991104..5991964) Clostridium beijerinckii NCIMB 8052 5296246 YP_001312157.1 CDS Cbei_5095 NC_009617.1 5991973 5992734 R PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: cpr:CPR_2666 sporulation initiation inhibitor protein soj; cobyrinic acid a,c-diamide synthase complement(5991973..5992734) Clostridium beijerinckii NCIMB 8052 5296247 YP_001312158.1 CDS Cbei_5096 NC_009617.1 5993079 5993861 R TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: cno:NT01CX_0876 spoOJ protein; parB-like partition protein complement(5993079..5993861) Clostridium beijerinckii NCIMB 8052 5296248 YP_001312159.1 CDS gidB NC_009617.1 5993999 5994718 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(5993999..5994718) Clostridium beijerinckii NCIMB 8052 5296249 YP_001312160.1 CDS Cbei_5098 NC_009617.1 5994742 5996622 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(5994742..5996622) Clostridium beijerinckii NCIMB 8052 5296250 YP_001312161.1 CDS trmE NC_009617.1 5996632 5998020 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(5996632..5998020) Clostridium beijerinckii NCIMB 8052 5296251 YP_001312162.1 CDS Cbei_5100 NC_009617.1 5998201 5998827 R PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: cpe:CPE2656 SpoIIIJ-associated protein; single-stranded nucleic acid binding R3H domain-containing protein complement(5998201..5998827) Clostridium beijerinckii NCIMB 8052 5296252 YP_001312163.1 CDS Cbei_5101 NC_009617.1 5998873 5999637 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC complement(5998873..5999637) Clostridium beijerinckii NCIMB 8052 5296253 YP_001312164.1 CDS Cbei_5102 NC_009617.1 5999661 5999870 R PFAM: protein of unknown function DUF37; KEGG: cpr:CPR_2672 conserved hypothetical protein TIGR00278; hypothetical protein complement(5999661..5999870) Clostridium beijerinckii NCIMB 8052 5296254 YP_001312165.1 CDS rnpA NC_009617.1 5999842 6000219 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(5999842..6000219) Clostridium beijerinckii NCIMB 8052 5296255 YP_001312166.1 CDS rpmH NC_009617.1 6000279 6000413 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(6000279..6000413) Clostridium beijerinckii NCIMB 8052 5296256 Cbei_R0004 tRNA Cbei_R0004 NC_009617.1 14528 14604 D tRNA-Met 14528..14604 Clostridium beijerinckii NCIMB 8052 5296259 Cbei_R0005 tRNA Cbei_R0005 NC_009617.1 14606 14681 D tRNA-Ala 14606..14681 Clostridium beijerinckii NCIMB 8052 5296260 Cbei_R0006 tRNA Cbei_R0006 NC_009617.1 17570 17660 D tRNA-Ser 17570..17660 Clostridium beijerinckii NCIMB 8052 5291246 Cbei_R0007 tRNA Cbei_R0007 NC_009617.1 17691 17781 D tRNA-Ser 17691..17781 Clostridium beijerinckii NCIMB 8052 5296262 Cbei_R0008 tRNA Cbei_R0008 NC_009617.1 18025 18115 D tRNA-Ser 18025..18115 Clostridium beijerinckii NCIMB 8052 5296263 Cbei_R0009 tRNA Cbei_R0009 NC_009617.1 18134 18224 D tRNA-Ser 18134..18224 Clostridium beijerinckii NCIMB 8052 5296264 Cbei_R0010 tRNA Cbei_R0010 NC_009617.1 29427 29501 D tRNA-Arg 29427..29501 Clostridium beijerinckii NCIMB 8052 5291252 Cbei_R0011 tRNA Cbei_R0011 NC_009617.1 121863 121951 D tRNA-Leu 121863..121951 Clostridium beijerinckii NCIMB 8052 5291331 Cbei_R0012 tRNA Cbei_R0012 NC_009617.1 121973 122048 D tRNA-Met 121973..122048 Clostridium beijerinckii NCIMB 8052 5296267 Cbei_R0013 tRNA Cbei_R0013 NC_009617.1 122056 122132 D tRNA-Met 122056..122132 Clostridium beijerinckii NCIMB 8052 5296268 Cbei_R0014 tRNA Cbei_R0014 NC_009617.1 122139 122227 D tRNA-Leu 122139..122227 Clostridium beijerinckii NCIMB 8052 5296269 Cbei_R0015 tRNA Cbei_R0015 NC_009617.1 122249 122324 D tRNA-Met 122249..122324 Clostridium beijerinckii NCIMB 8052 5296270 Cbei_R0016 tRNA Cbei_R0016 NC_009617.1 122332 122408 D tRNA-Met 122332..122408 Clostridium beijerinckii NCIMB 8052 5296271 Cbei_R0017 tRNA Cbei_R0017 NC_009617.1 122415 122503 D tRNA-Leu 122415..122503 Clostridium beijerinckii NCIMB 8052 5296272 Cbei_R0018 tRNA Cbei_R0018 NC_009617.1 122525 122600 D tRNA-Met 122525..122600 Clostridium beijerinckii NCIMB 8052 5296273 Cbei_R0019 tRNA Cbei_R0019 NC_009617.1 122671 122759 D tRNA-Leu 122671..122759 Clostridium beijerinckii NCIMB 8052 5296274 Cbei_R0020 tRNA Cbei_R0020 NC_009617.1 122781 122856 D tRNA-Met 122781..122856 Clostridium beijerinckii NCIMB 8052 5296275 Cbei_R0021 tRNA Cbei_R0021 NC_009617.1 136705 136779 D tRNA-Asn 136705..136779 Clostridium beijerinckii NCIMB 8052 5291340 Cbei_R0022 tRNA Cbei_R0022 NC_009617.1 137017 137091 D tRNA-Asn 137017..137091 Clostridium beijerinckii NCIMB 8052 5296277 Cbei_R0023 tRNA Cbei_R0023 NC_009617.1 137531 137605 D tRNA-Asn 137531..137605 Clostridium beijerinckii NCIMB 8052 5296278 Cbei_R0025 tRNA Cbei_R0025 NC_009617.1 144098 144173 D tRNA-Ala 144098..144173 Clostridium beijerinckii NCIMB 8052 5296280 Cbei_R0026 tRNA Cbei_R0026 NC_009617.1 144177 144253 D tRNA-Ile 144177..144253 Clostridium beijerinckii NCIMB 8052 5296281 Cbei_R0029 tRNA Cbei_R0029 NC_009617.1 147468 147543 D tRNA-Phe 147468..147543 Clostridium beijerinckii NCIMB 8052 5296284 Cbei_R0030 tRNA Cbei_R0030 NC_009617.1 147548 147622 D tRNA-Cys 147548..147622 Clostridium beijerinckii NCIMB 8052 5296285 Cbei_R0031 tRNA Cbei_R0031 NC_009617.1 174419 174494 D tRNA-Thr 174419..174494 Clostridium beijerinckii NCIMB 8052 5291370 Cbei_R0032 tRNA Cbei_R0032 NC_009617.1 354960 355044 D tRNA-Leu 354960..355044 Clostridium beijerinckii NCIMB 8052 5291527 Cbei_R0033 tRNA Cbei_R0033 NC_009617.1 355049 355123 D tRNA-Gly 355049..355123 Clostridium beijerinckii NCIMB 8052 5296290 Cbei_R0034 tRNA Cbei_R0034 NC_009617.1 431481 431556 D tRNA-Pro 431481..431556 Clostridium beijerinckii NCIMB 8052 5291590 Cbei_R0035 tRNA Cbei_R0035 NC_009617.1 431574 431647 D tRNA-Gly 431574..431647 Clostridium beijerinckii NCIMB 8052 5296292 Cbei_R0036 tRNA Cbei_R0036 NC_009617.1 431798 431874 D tRNA-Arg 431798..431874 Clostridium beijerinckii NCIMB 8052 5296293 Cbei_R0037 tRNA Cbei_R0037 NC_009617.1 431881 431956 D tRNA-Pro 431881..431956 Clostridium beijerinckii NCIMB 8052 5296294 Cbei_R0038 tRNA Cbei_R0038 NC_009617.1 431973 432046 D tRNA-Gly 431973..432046 Clostridium beijerinckii NCIMB 8052 5296295 Cbei_R0039 tRNA Cbei_R0039 NC_009617.1 432082 432158 D tRNA-Arg 432082..432158 Clostridium beijerinckii NCIMB 8052 5296296 Cbei_R0040 tRNA Cbei_R0040 NC_009617.1 432164 432239 D tRNA-His 432164..432239 Clostridium beijerinckii NCIMB 8052 5296297 Cbei_R0041 tRNA Cbei_R0041 NC_009617.1 432243 432317 D tRNA-Gln 432243..432317 Clostridium beijerinckii NCIMB 8052 5296298 Cbei_R0042 tRNA Cbei_R0042 NC_009617.1 432325 432400 D tRNA-Lys 432325..432400 Clostridium beijerinckii NCIMB 8052 5296299 Cbei_R0043 tRNA Cbei_R0043 NC_009617.1 432418 432502 D tRNA-Leu 432418..432502 Clostridium beijerinckii NCIMB 8052 5296300 Cbei_R0044 tRNA Cbei_R0044 NC_009617.1 432508 432582 D tRNA-Gly 432508..432582 Clostridium beijerinckii NCIMB 8052 5296301 Cbei_R0045 tRNA Cbei_R0045 NC_009617.1 432606 432679 D tRNA-Gly 432606..432679 Clostridium beijerinckii NCIMB 8052 5296302 Cbei_R0046 tRNA Cbei_R0046 NC_009617.1 432685 432760 D tRNA-Lys 432685..432760 Clostridium beijerinckii NCIMB 8052 5296303 Cbei_R0047 tRNA Cbei_R0047 NC_009617.1 432818 432892 D tRNA-Gln 432818..432892 Clostridium beijerinckii NCIMB 8052 5296304 Cbei_R0048 tRNA Cbei_R0048 NC_009617.1 432900 432975 D tRNA-Lys 432900..432975 Clostridium beijerinckii NCIMB 8052 5296305 Cbei_R0049 tRNA Cbei_R0049 NC_009617.1 432995 433079 D tRNA-Leu 432995..433079 Clostridium beijerinckii NCIMB 8052 5296306 Cbei_R0050 tRNA Cbei_R0050 NC_009617.1 433085 433159 D tRNA-Gly 433085..433159 Clostridium beijerinckii NCIMB 8052 5296307 Cbei_R0051 tRNA Cbei_R0051 NC_009617.1 433183 433256 D tRNA-Gly 433183..433256 Clostridium beijerinckii NCIMB 8052 5296308 Cbei_R0052 tRNA Cbei_R0052 NC_009617.1 433303 433379 D tRNA-Arg 433303..433379 Clostridium beijerinckii NCIMB 8052 5296309 Cbei_R0054 tRNA Cbei_R0054 NC_009617.1 447774 447850 D tRNA-Ile 447774..447850 Clostridium beijerinckii NCIMB 8052 5296311 Cbei_R0056 tRNA Cbei_R0056 NC_009617.1 450919 450993 D tRNA-Asn 450919..450993 Clostridium beijerinckii NCIMB 8052 5296313 Cbei_R0057 tRNA Cbei_R0057 NC_009617.1 515496 515580 D tRNA-Tyr 515496..515580 Clostridium beijerinckii NCIMB 8052 5291660 Cbei_R0058 tRNA Cbei_R0058 NC_009617.1 515590 515665 D tRNA-Val 515590..515665 Clostridium beijerinckii NCIMB 8052 5296315 Cbei_R0059 tRNA Cbei_R0059 NC_009617.1 515693 515767 D tRNA-Thr 515693..515767 Clostridium beijerinckii NCIMB 8052 5296316 Cbei_R0060 tRNA Cbei_R0060 NC_009617.1 515780 515864 D tRNA-Tyr 515780..515864 Clostridium beijerinckii NCIMB 8052 5296317 Cbei_R0061 tRNA Cbei_R0061 NC_009617.1 515874 515949 D tRNA-Val 515874..515949 Clostridium beijerinckii NCIMB 8052 5296318 Cbei_R0062 tRNA Cbei_R0062 NC_009617.1 515980 516054 D tRNA-Thr 515980..516054 Clostridium beijerinckii NCIMB 8052 5296319 Cbei_R0063 tRNA Cbei_R0063 NC_009617.1 516067 516151 D tRNA-Tyr 516067..516151 Clostridium beijerinckii NCIMB 8052 5296320 Cbei_R0064 tRNA Cbei_R0064 NC_009617.1 568733 568807 D tRNA-Trp 568733..568807 Clostridium beijerinckii NCIMB 8052 5291703 Cbei_R0065 tRNA Cbei_R0065 NC_009617.1 570814 570888 D tRNA-Trp 570814..570888 Clostridium beijerinckii NCIMB 8052 5291705 Cbei_R0068 tRNA Cbei_R0068 NC_009617.1 926564 926639 D tRNA-Ala 926564..926639 Clostridium beijerinckii NCIMB 8052 5296329 Cbei_R0071 tRNA Cbei_R0071 NC_009617.1 973865 973950 D tRNA-Leu 973865..973950 Clostridium beijerinckii NCIMB 8052 5292032 Cbei_R0073 tRNA Cbei_R0073 NC_009617.1 1735288 1735363 D tRNA-His 1735288..1735363 Clostridium beijerinckii NCIMB 8052 5292695 Cbei_R0074 tRNA Cbei_R0074 NC_009617.1 1735367 1735441 D tRNA-Gln 1735367..1735441 Clostridium beijerinckii NCIMB 8052 5296341 Cbei_R0075 tRNA Cbei_R0075 NC_009617.1 1735448 1735523 D tRNA-Lys 1735448..1735523 Clostridium beijerinckii NCIMB 8052 5296342 Cbei_R0076 tRNA Cbei_R0076 NC_009617.1 1765271 1765357 R tRNA-Leu complement(1765271..1765357) Clostridium beijerinckii NCIMB 8052 5292715 Cbei_R0083 tRNA Cbei_R0083 NC_009617.1 2259548 2259622 D tRNA-Asn 2259548..2259622 Clostridium beijerinckii NCIMB 8052 5296358 Cbei_R0087 tRNA Cbei_R0087 NC_009617.1 2271078 2271152 D tRNA-Asn 2271078..2271152 Clostridium beijerinckii NCIMB 8052 5296362 Cbei_R0089 tRNA Cbei_R0089 NC_009617.1 2672602 2672676 R tRNA-Glu complement(2672602..2672676) Clostridium beijerinckii NCIMB 8052 5293511 Cbei_R0090 tRNA Cbei_R0090 NC_009617.1 3398860 3398934 R tRNA-Glu complement(3398860..3398934) Clostridium beijerinckii NCIMB 8052 5294100 Cbei_R0091 tRNA Cbei_R0091 NC_009617.1 3398954 3399028 R tRNA-Thr complement(3398954..3399028) Clostridium beijerinckii NCIMB 8052 5296389 Cbei_R0092 tRNA Cbei_R0092 NC_009617.1 3399044 3399120 R tRNA-Asp complement(3399044..3399120) Clostridium beijerinckii NCIMB 8052 5296390 Cbei_R0093 tRNA Cbei_R0093 NC_009617.1 3399127 3399202 R tRNA-Phe complement(3399127..3399202) Clostridium beijerinckii NCIMB 8052 5296391 Cbei_R0097 tRNA Cbei_R0097 NC_009617.1 3549338 3549425 R tRNA-Ile complement(3549338..3549425) Clostridium beijerinckii NCIMB 8052 5294229 Cbei_R0098 tRNA Cbei_R0098 NC_009617.1 3958886 3958961 R tRNA-Lys complement(3958886..3958961) Clostridium beijerinckii NCIMB 8052 5294580 Cbei_R0099 tRNA Cbei_R0099 NC_009617.1 3959040 3959115 R tRNA-His complement(3959040..3959115) Clostridium beijerinckii NCIMB 8052 5296414 Cbei_R0100 tRNA Cbei_R0100 NC_009617.1 3959122 3959198 R tRNA-Arg complement(3959122..3959198) Clostridium beijerinckii NCIMB 8052 5296415 Cbei_R0101 tRNA Cbei_R0101 NC_009617.1 3959234 3959307 R tRNA-Gly complement(3959234..3959307) Clostridium beijerinckii NCIMB 8052 5296416 Cbei_R0105 tRNA Cbei_R0105 NC_009617.1 5724399 5724474 D tRNA-Pro 5724399..5724474 Clostridium beijerinckii NCIMB 8052 5296041 Cbei_R0106 tRNA Cbei_R0106 NC_009617.1 5728021 5728096 R tRNA-Phe complement(5728021..5728096) Clostridium beijerinckii NCIMB 8052 5296045 Cbei_R0108 tRNA Cbei_R0108 NC_009617.1 5737922 5737997 R tRNA-Ala complement(5737922..5737997) Clostridium beijerinckii NCIMB 8052 5296053 Cbei_R0109 tRNA Cbei_R0109 NC_009617.1 5737999 5738075 R tRNA-Met complement(5737999..5738075) Clostridium beijerinckii NCIMB 8052 5296444 Cbei_R0113 tRNA Cbei_R0113 NC_009617.1 5745497 5745572 R tRNA-Lys complement(5745497..5745572) Clostridium beijerinckii NCIMB 8052 5296055 Cbei_R0115 tRNA Cbei_R0115 NC_009617.1 5747092 5747167 R tRNA-Lys complement(5747092..5747167) Clostridium beijerinckii NCIMB 8052 5296056 Cbei_R0126 tRNA Cbei_R0126 NC_009617.1 5886417 5886506 R tRNA-Ser complement(5886417..5886506) Clostridium beijerinckii NCIMB 8052 5296155 Cbei_R0127 tRNA Cbei_R0127 NC_009617.1 5911068 5911142 R tRNA-Arg complement(5911068..5911142) Clostridium beijerinckii NCIMB 8052 5296179 Cbei_R0131 tRNA Cbei_R0131 NC_009617.1 5967624 5967700 R tRNA-Asp complement(5967624..5967700) Clostridium beijerinckii NCIMB 8052 5296222 Cbei_R0132 tRNA Cbei_R0132 NC_009617.1 5967707 5967782 R tRNA-Val complement(5967707..5967782) Clostridium beijerinckii NCIMB 8052 5296467 Cbei_R0133 tRNA Cbei_R0133 NC_009617.1 5967799 5967873 R tRNA-Glu complement(5967799..5967873) Clostridium beijerinckii NCIMB 8052 5296468 Cbei_R0134 tRNA Cbei_R0134 NC_009617.1 5967903 5967977 R tRNA-Thr complement(5967903..5967977) Clostridium beijerinckii NCIMB 8052 5296469 Cbei_R0135 tRNA Cbei_R0135 NC_009617.1 5967988 5968064 R tRNA-Asp complement(5967988..5968064) Clostridium beijerinckii NCIMB 8052 5296470 Cbei_R0136 tRNA Cbei_R0136 NC_009617.1 5968071 5968146 R tRNA-Val complement(5968071..5968146) Clostridium beijerinckii NCIMB 8052 5296471 Cbei_R0137 tRNA Cbei_R0137 NC_009617.1 5968162 5968236 R tRNA-Glu complement(5968162..5968236) Clostridium beijerinckii NCIMB 8052 5296472 Cbei_R0138 tRNA Cbei_R0138 NC_009617.1 5968266 5968340 R tRNA-Thr complement(5968266..5968340) Clostridium beijerinckii NCIMB 8052 5296473 Cbei_R0139 tRNA Cbei_R0139 NC_009617.1 5968351 5968427 R tRNA-Asp complement(5968351..5968427) Clostridium beijerinckii NCIMB 8052 5296474 Cbei_R0140 tRNA Cbei_R0140 NC_009617.1 5968434 5968509 R tRNA-Val complement(5968434..5968509) Clostridium beijerinckii NCIMB 8052 5296475 Cbei_R0141 tRNA Cbei_R0141 NC_009617.1 5968526 5968600 R tRNA-Glu complement(5968526..5968600) Clostridium beijerinckii NCIMB 8052 5296476 Cbei_R0001 rRNA Cbei_R0001 NC_009617.1 9623 11127 D 16S ribosomal RNA 9623..11127 Clostridium beijerinckii NCIMB 8052 5291242 Cbei_R0002 rRNA Cbei_R0002 NC_009617.1 11348 14256 D 23S ribosomal RNA 11348..14256 Clostridium beijerinckii NCIMB 8052 5296257 Cbei_R0003 rRNA Cbei_R0003 NC_009617.1 14369 14484 D 5S ribosomal RNA 14369..14484 Clostridium beijerinckii NCIMB 8052 5296258 Cbei_R0024 rRNA Cbei_R0024 NC_009617.1 142453 143957 D 16S ribosomal RNA 142453..143957 Clostridium beijerinckii NCIMB 8052 5291343 Cbei_R0027 rRNA Cbei_R0027 NC_009617.1 144366 147274 D 23S ribosomal RNA 144366..147274 Clostridium beijerinckii NCIMB 8052 5296282 Cbei_R0028 rRNA Cbei_R0028 NC_009617.1 147348 147463 D 5S ribosomal RNA 147348..147463 Clostridium beijerinckii NCIMB 8052 5296283 Cbei_R0053 rRNA Cbei_R0053 NC_009617.1 446133 447637 D 16S ribosomal RNA 446133..447637 Clostridium beijerinckii NCIMB 8052 5291600 Cbei_R0055 rRNA Cbei_R0055 NC_009617.1 447938 450846 D 23S ribosomal RNA 447938..450846 Clostridium beijerinckii NCIMB 8052 5296312 Cbei_R0067 rRNA Cbei_R0067 NC_009617.1 924919 926423 D 16S ribosomal RNA 924919..926423 Clostridium beijerinckii NCIMB 8052 5291993 Cbei_R0069 rRNA Cbei_R0069 NC_009617.1 926762 929670 D 23S ribosomal RNA 926762..929670 Clostridium beijerinckii NCIMB 8052 5296330 Cbei_R0070 rRNA Cbei_R0070 NC_009617.1 929807 929922 D 5S ribosomal RNA 929807..929922 Clostridium beijerinckii NCIMB 8052 5296331 Cbei_R0077 rRNA Cbei_R0077 NC_009617.1 2031255 2032759 D 16S ribosomal RNA 2031255..2032759 Clostridium beijerinckii NCIMB 8052 5292975 Cbei_R0078 rRNA Cbei_R0078 NC_009617.1 2033276 2036186 D 23S ribosomal RNA 2033276..2036186 Clostridium beijerinckii NCIMB 8052 5296351 Cbei_R0079 rRNA Cbei_R0079 NC_009617.1 2036440 2036555 D 5S ribosomal RNA 2036440..2036555 Clostridium beijerinckii NCIMB 8052 5296352 Cbei_R0081 rRNA Cbei_R0081 NC_009617.1 2254715 2256219 D 16S ribosomal RNA 2254715..2256219 Clostridium beijerinckii NCIMB 8052 5293166 Cbei_R0082 rRNA Cbei_R0082 NC_009617.1 2256566 2259476 D 23S ribosomal RNA 2256566..2259476 Clostridium beijerinckii NCIMB 8052 5296357 Cbei_R0084 rRNA Cbei_R0084 NC_009617.1 2259628 2259743 D 5S ribosomal RNA 2259628..2259743 Clostridium beijerinckii NCIMB 8052 5296359 Cbei_R0085 rRNA Cbei_R0085 NC_009617.1 2266370 2267874 D 16S ribosomal RNA 2266370..2267874 Clostridium beijerinckii NCIMB 8052 5293171 Cbei_R0086 rRNA Cbei_R0086 NC_009617.1 2268095 2271006 D 23S ribosomal RNA 2268095..2271006 Clostridium beijerinckii NCIMB 8052 5296361 Cbei_R0088 rRNA Cbei_R0088 NC_009617.1 2271158 2271273 D 5S ribosomal RNA 2271158..2271273 Clostridium beijerinckii NCIMB 8052 5296363 Cbei_R0094 rRNA Cbei_R0094 NC_009617.1 3399207 3399322 R 5S ribosomal RNA complement(3399207..3399322) Clostridium beijerinckii NCIMB 8052 5296392 Cbei_R0095 rRNA Cbei_R0095 NC_009617.1 3399464 3402373 R 23S ribosomal RNA complement(3399464..3402373) Clostridium beijerinckii NCIMB 8052 5296393 Cbei_R0096 rRNA Cbei_R0096 NC_009617.1 3402720 3404224 R 16S ribosomal RNA complement(3402720..3404224) Clostridium beijerinckii NCIMB 8052 5296394 Cbei_R0102 rRNA Cbei_R0102 NC_009617.1 4542982 4543097 R 5S ribosomal RNA complement(4542982..4543097) Clostridium beijerinckii NCIMB 8052 5295120 Cbei_R0103 rRNA Cbei_R0103 NC_009617.1 4543173 4546085 R 23S ribosomal RNA complement(4543173..4546085) Clostridium beijerinckii NCIMB 8052 5296434 Cbei_R0104 rRNA Cbei_R0104 NC_009617.1 4546432 4547936 R 16S ribosomal RNA complement(4546432..4547936) Clostridium beijerinckii NCIMB 8052 5296435 Cbei_R0107 rRNA Cbei_R0107 NC_009617.1 5728101 5728216 R 5S ribosomal RNA complement(5728101..5728216) Clostridium beijerinckii NCIMB 8052 5296442 Cbei_R0110 rRNA Cbei_R0110 NC_009617.1 5738119 5738234 R 5S ribosomal RNA complement(5738119..5738234) Clostridium beijerinckii NCIMB 8052 5296445 Cbei_R0111 rRNA Cbei_R0111 NC_009617.1 5738310 5741220 R 23S ribosomal RNA complement(5738310..5741220) Clostridium beijerinckii NCIMB 8052 5296446 Cbei_R0112 rRNA Cbei_R0112 NC_009617.1 5741441 5742945 R 16S ribosomal RNA complement(5741441..5742945) Clostridium beijerinckii NCIMB 8052 5296447 Cbei_R0114 rRNA Cbei_R0114 NC_009617.1 5745577 5745692 R 5S ribosomal RNA complement(5745577..5745692) Clostridium beijerinckii NCIMB 8052 5296449 Cbei_R0116 rRNA Cbei_R0116 NC_009617.1 5747174 5747289 R 5S ribosomal RNA complement(5747174..5747289) Clostridium beijerinckii NCIMB 8052 5296451 Cbei_R0117 rRNA Cbei_R0117 NC_009617.1 5747365 5750273 R 23S ribosomal RNA complement(5747365..5750273) Clostridium beijerinckii NCIMB 8052 5296452 Cbei_R0118 rRNA Cbei_R0118 NC_009617.1 5750494 5751998 R 16S ribosomal RNA complement(5750494..5751998) Clostridium beijerinckii NCIMB 8052 5296453 Cbei_R0119 rRNA Cbei_R0119 NC_009617.1 5764406 5764521 R 5S ribosomal RNA complement(5764406..5764521) Clostridium beijerinckii NCIMB 8052 5296062 Cbei_R0120 rRNA Cbei_R0120 NC_009617.1 5764658 5767566 R 23S ribosomal RNA complement(5764658..5767566) Clostridium beijerinckii NCIMB 8052 5296455 Cbei_R0121 rRNA Cbei_R0121 NC_009617.1 5767787 5769291 R 16S ribosomal RNA complement(5767787..5769291) Clostridium beijerinckii NCIMB 8052 5296456 Cbei_R0122 rRNA Cbei_R0122 NC_009617.1 5770404 5770519 R 5S ribosomal RNA complement(5770404..5770519) Clostridium beijerinckii NCIMB 8052 5296457 Cbei_R0123 rRNA Cbei_R0123 NC_009617.1 5770595 5773503 R 23S ribosomal RNA complement(5770595..5773503) Clostridium beijerinckii NCIMB 8052 5296458 Cbei_R0124 rRNA Cbei_R0124 NC_009617.1 5773724 5775228 R 16S ribosomal RNA complement(5773724..5775228) Clostridium beijerinckii NCIMB 8052 5296459 Cbei_R0128 rRNA Cbei_R0128 NC_009617.1 5928131 5928246 R 5S ribosomal RNA complement(5928131..5928246) Clostridium beijerinckii NCIMB 8052 5296191 Cbei_R0129 rRNA Cbei_R0129 NC_009617.1 5928322 5931233 R 23S ribosomal RNA complement(5928322..5931233) Clostridium beijerinckii NCIMB 8052 5296464 Cbei_R0130 rRNA Cbei_R0130 NC_009617.1 5931454 5932958 R 16S ribosomal RNA complement(5931454..5932958) Clostridium beijerinckii NCIMB 8052 5296465