-- dump date 20140619_043015 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 441770000001 SEQ_END SEQ_END NC_009697.1 3863450 3863450 DR NC_009697.1; contig end 3863450..3863450 Clostridium botulinum A str. ATCC 19397 YP_001382411.1 CDS dnaA NC_009697.1 1 1347 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1..1347 Clostridium botulinum A str. ATCC 19397 5395716 YP_001382412.1 CDS dnaN NC_009697.1 1610 2713 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 1610..2713 Clostridium botulinum A str. ATCC 19397 5394695 YP_001382413.1 CDS CLB_0003 NC_009697.1 2732 2938 D identified by match to protein family HMM PF01479; match to protein family HMM TIGR02988; S4 domain-containing protein 2732..2938 Clostridium botulinum A str. ATCC 19397 5394963 YP_001382414.1 CDS recF NC_009697.1 3007 4101 D Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 3007..4101 Clostridium botulinum A str. ATCC 19397 5397407 YP_001382415.1 CDS CLB_0005 NC_009697.1 4122 4385 D hypothetical protein 4122..4385 Clostridium botulinum A str. ATCC 19397 5396677 YP_001382416.1 CDS gyrB NC_009697.1 4403 6316 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 4403..6316 Clostridium botulinum A str. ATCC 19397 5396155 YP_001382417.1 CDS gyrA NC_009697.1 6342 8867 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 6342..8867 Clostridium botulinum A str. ATCC 19397 5395138 YP_001382418.1 CDS CLB_0015 NC_009697.1 14442 14894 D hypothetical protein 14442..14894 Clostridium botulinum A str. ATCC 19397 5395796 YP_001382419.1 CDS CLB_0016 NC_009697.1 14910 15431 D identified by match to protein family HMM PF02829; match to protein family HMM PF08279; transcriptional regulator 14910..15431 Clostridium botulinum A str. ATCC 19397 5395229 YP_001382420.1 CDS CLB_0017 NC_009697.1 15433 16596 D identified by match to protein family HMM PF00037; match to protein family HMM PF04015; (Fe-S)-binding protein 15433..16596 Clostridium botulinum A str. ATCC 19397 5394937 YP_001382421.1 CDS CLB_0018 NC_009697.1 16601 19282 D identified by match to protein family HMM PF03699; hypothetical protein 16601..19282 Clostridium botulinum A str. ATCC 19397 5395965 YP_001382422.1 CDS CLB_0019 NC_009697.1 19419 20195 D identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 19419..20195 Clostridium botulinum A str. ATCC 19397 5395408 YP_001382423.1 CDS CLB_0020 NC_009697.1 20220 21617 D identified by match to protein family HMM PF01266; match to protein family HMM PF04324; oxidoreductase, FAD dependent 20220..21617 Clostridium botulinum A str. ATCC 19397 5394980 YP_001382424.1 CDS CLB_0021 NC_009697.1 21634 21987 D identified by match to protein family HMM PF07892; hypothetical protein 21634..21987 Clostridium botulinum A str. ATCC 19397 5397324 YP_001382425.1 CDS serS-1 NC_009697.1 22357 23637 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 22357..23637 Clostridium botulinum A str. ATCC 19397 5396351 YP_001382426.1 CDS CLB_0029 NC_009697.1 26616 26978 D identified by Glimmer3; hypothetical protein 26616..26978 Clostridium botulinum A str. ATCC 19397 5396916 YP_001382427.1 CDS CLB_0030 NC_009697.1 27051 27899 D identified by match to protein family HMM PF00005; antibiotic ABC transporter ATP-binding protein 27051..27899 Clostridium botulinum A str. ATCC 19397 5396355 YP_001382428.1 CDS CLB_0031 NC_009697.1 27908 28741 D hypothetical protein 27908..28741 Clostridium botulinum A str. ATCC 19397 5396813 YP_001382429.1 CDS CLB_0032 NC_009697.1 28753 29556 D hypothetical protein 28753..29556 Clostridium botulinum A str. ATCC 19397 5397310 YP_001382430.1 CDS CLB_0033 NC_009697.1 29573 30385 D hypothetical protein 29573..30385 Clostridium botulinum A str. ATCC 19397 5397318 YP_001382431.1 CDS psd NC_009697.1 30625 31512 R catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase complement(30625..31512) Clostridium botulinum A str. ATCC 19397 5397028 YP_001382432.1 CDS CLB_0035 NC_009697.1 31615 33213 R identified by match to protein family HMM PF01163; match to protein family HMM PF03109; hypothetical protein complement(31615..33213) Clostridium botulinum A str. ATCC 19397 5397375 YP_001382433.1 CDS CLB_0036 NC_009697.1 33289 33609 R hypothetical protein complement(33289..33609) Clostridium botulinum A str. ATCC 19397 5396408 YP_001382434.1 CDS CLB_0038 NC_009697.1 34004 35542 D identified by match to protein family HMM PF00158; match to protein family HMM PF02954; sensory box sigma-54 dependent transcriptional regulator 34004..35542 Clostridium botulinum A str. ATCC 19397 5395153 YP_001382435.1 CDS megL NC_009697.1 35702 36904 D catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine; methionine gamma-lyase 35702..36904 Clostridium botulinum A str. ATCC 19397 5396140 YP_001382436.1 CDS CLB_0040 NC_009697.1 37028 37465 D identified by match to protein family HMM PF00383; cytidine/deoxycytidylate deaminase family protein 37028..37465 Clostridium botulinum A str. ATCC 19397 5396420 YP_001382437.1 CDS dnaX NC_009697.1 38110 39735 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 38110..39735 Clostridium botulinum A str. ATCC 19397 5395634 YP_001382438.1 CDS CLB_0043 NC_009697.1 39800 40141 D identified by match to protein family HMM PF02575; match to protein family HMM TIGR00103; hypothetical protein 39800..40141 Clostridium botulinum A str. ATCC 19397 5397065 YP_001382439.1 CDS recR NC_009697.1 40174 40770 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 40174..40770 Clostridium botulinum A str. ATCC 19397 5396323 YP_001382440.1 CDS CLB_0045 NC_009697.1 40827 41090 D hypothetical protein 40827..41090 Clostridium botulinum A str. ATCC 19397 5395053 YP_001382441.1 CDS bofA NC_009697.1 41240 41500 D identified by match to protein family HMM PF07441; match to protein family HMM TIGR02862; sigma-K factor processing regulatory protein BofA 41240..41500 Clostridium botulinum A str. ATCC 19397 5396143 YP_001382442.1 CDS sfsA NC_009697.1 41651 42343 D Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A 41651..42343 Clostridium botulinum A str. ATCC 19397 5394667 YP_001382443.1 CDS CLB_0048 NC_009697.1 42399 42887 D identified by match to protein family HMM PF00293; NUDIX family hydrolase 42399..42887 Clostridium botulinum A str. ATCC 19397 5396144 YP_001382444.1 CDS CLB_0049 NC_009697.1 43005 43727 D hypothetical protein 43005..43727 Clostridium botulinum A str. ATCC 19397 5396074 YP_001382445.1 CDS CLB_0050 NC_009697.1 43861 44649 D identified by match to protein family HMM PF00037; (Fe-S)-binding protein 43861..44649 Clostridium botulinum A str. ATCC 19397 5398210 YP_001382446.1 CDS CLB_0051 NC_009697.1 44668 44829 D hypothetical protein 44668..44829 Clostridium botulinum A str. ATCC 19397 5395551 YP_001382447.1 CDS CLB_0052 NC_009697.1 45212 45916 D identified by match to protein family HMM PF00899; ThiF domain-containing protein 45212..45916 Clostridium botulinum A str. ATCC 19397 5395572 YP_001382448.1 CDS CLB_0053 NC_009697.1 45999 47108 D identified by match to protein family HMM PF07690; major facilitator superfamily protein 45999..47108 Clostridium botulinum A str. ATCC 19397 5396530 YP_001382449.1 CDS CLB_0054 NC_009697.1 47137 48081 D identified by match to protein family HMM PF00583; acetyltransferase 47137..48081 Clostridium botulinum A str. ATCC 19397 5398219 YP_001382450.1 CDS CLB_0061 NC_009697.1 53636 54232 R identified by match to protein family HMM PF03167; uracil-DNA glycosylase complement(53636..54232) Clostridium botulinum A str. ATCC 19397 5396007 YP_001382451.1 CDS CLB_0068 NC_009697.1 60393 60956 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 60393..60956 Clostridium botulinum A str. ATCC 19397 5395498 YP_001382452.1 CDS CLB_0069 NC_009697.1 60953 62395 D hypothetical protein 60953..62395 Clostridium botulinum A str. ATCC 19397 5396929 YP_001382453.1 CDS CLB_0076 NC_009697.1 68057 68800 D identified by match to protein family HMM PF00639; peptidil-prolyl isomerase family protein 68057..68800 Clostridium botulinum A str. ATCC 19397 5395178 YP_001382454.1 CDS CLB_0082 NC_009697.1 74539 75282 D Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 74539..75282 Clostridium botulinum A str. ATCC 19397 5394903 YP_001382455.1 CDS CLB_0084 NC_009697.1 75468 76376 R identified by match to protein family HMM PF02016; LD-carboxypeptidase family protein complement(75468..76376) Clostridium botulinum A str. ATCC 19397 5397151 YP_001382456.1 CDS CLB_0085 NC_009697.1 76412 77353 R identified by match to protein family HMM PF01544; CorA family protein complement(76412..77353) Clostridium botulinum A str. ATCC 19397 5397086 YP_001382457.1 CDS CLB_0086 NC_009697.1 77718 78221 D hypothetical protein 77718..78221 Clostridium botulinum A str. ATCC 19397 5398092 YP_001382458.1 CDS CLB_0087 NC_009697.1 78226 79386 R amidohydrolase complement(78226..79386) Clostridium botulinum A str. ATCC 19397 5397465 YP_001382459.1 CDS CLB_0088 NC_009697.1 79640 79852 D csfB protein-like protein 79640..79852 Clostridium botulinum A str. ATCC 19397 5397932 YP_001382460.1 CDS CLB_0089 NC_009697.1 79831 81279 D identified by match to protein family HMM PF01276; match to protein family HMM PF03711; Orn/Lys/Arg decarboxylase 79831..81279 Clostridium botulinum A str. ATCC 19397 5397634 YP_001382461.1 CDS CLB_0090 NC_009697.1 81303 81998 D thymidylate kinase 81303..81998 Clostridium botulinum A str. ATCC 19397 5395842 YP_001382462.1 CDS CLB_0091 NC_009697.1 82079 82408 D identified by match to protein family HMM PF06153; hypothetical protein 82079..82408 Clostridium botulinum A str. ATCC 19397 5395519 YP_001382463.1 CDS CLB_0092 NC_009697.1 82426 83370 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 82426..83370 Clostridium botulinum A str. ATCC 19397 5396041 YP_001382464.1 CDS CLB_0093 NC_009697.1 83372 84286 D identified by match to protein family HMM PF04468; PSP1 domain-containing protein 83372..84286 Clostridium botulinum A str. ATCC 19397 5397043 YP_001382465.1 CDS CLB_0094 NC_009697.1 84298 84501 D hypothetical protein 84298..84501 Clostridium botulinum A str. ATCC 19397 5395853 YP_001382466.1 CDS CLB_0095 NC_009697.1 84583 84753 D identified by match to protein family HMM PF00037; ferredoxin, 4Fe-4S 84583..84753 Clostridium botulinum A str. ATCC 19397 5396324 YP_001382467.1 CDS CLB_0096 NC_009697.1 84874 85614 D hypothetical protein 84874..85614 Clostridium botulinum A str. ATCC 19397 5397853 YP_001382468.1 CDS CLB_0097 NC_009697.1 85634 86488 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR00096; tetrapyrrole methylase family protein 85634..86488 Clostridium botulinum A str. ATCC 19397 5394764 YP_001382469.1 CDS CLB_0098 NC_009697.1 86644 87747 D identified by match to protein family HMM PF00877; NlpC/P60 family protein 86644..87747 Clostridium botulinum A str. ATCC 19397 5397226 YP_001382470.1 CDS CLB_0099 NC_009697.1 87847 88092 R identified by match to protein family HMM PF04014; match to protein family HMM TIGR01439; AbrB family transcriptional regulator complement(87847..88092) Clostridium botulinum A str. ATCC 19397 5397015 YP_001382471.1 CDS CLB_0100 NC_009697.1 88899 89510 D identified by match to protein family HMM PF08876; hypothetical protein 88899..89510 Clostridium botulinum A str. ATCC 19397 5394929 YP_001382472.1 CDS arcA-1 NC_009697.1 89932 91143 D identified by match to protein family HMM PF02274; match to protein family HMM TIGR01078; arginine deiminase 89932..91143 Clostridium botulinum A str. ATCC 19397 5394860 YP_001382473.1 CDS ispF NC_009697.1 91229 91696 R catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(91229..91696) Clostridium botulinum A str. ATCC 19397 5397637 YP_001382474.1 CDS CLB_0103 NC_009697.1 91772 92104 R identified by Glimmer3; hypothetical protein complement(91772..92104) Clostridium botulinum A str. ATCC 19397 5395589 YP_001382475.1 CDS CLB_0104 NC_009697.1 92432 93301 D identified by match to protein family HMM PF01522; polysaccharide deacetylase 92432..93301 Clostridium botulinum A str. ATCC 19397 5394578 YP_001382476.1 CDS CLB_0105 NC_009697.1 93570 93812 R hypothetical protein complement(93570..93812) Clostridium botulinum A str. ATCC 19397 5396684 YP_001382477.1 CDS spmA NC_009697.1 93932 94507 D identified by match to protein family HMM PF07670; spore maturation protein A 93932..94507 Clostridium botulinum A str. ATCC 19397 5396960 YP_001382478.1 CDS CLB_0107 NC_009697.1 94520 95038 D identified by match to protein family HMM PF07670; spore maturation protein B 94520..95038 Clostridium botulinum A str. ATCC 19397 5397418 YP_001382479.1 CDS CLB_0108 NC_009697.1 95283 96620 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein complement(95283..96620) Clostridium botulinum A str. ATCC 19397 5396331 YP_001382480.1 CDS udgA NC_009697.1 96764 97336 D identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758; uracil-DNA glycosylase 96764..97336 Clostridium botulinum A str. ATCC 19397 5395324 YP_001382481.1 CDS CLB_0110 NC_009697.1 97365 97799 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 97365..97799 Clostridium botulinum A str. ATCC 19397 5396021 YP_001382482.1 CDS metG NC_009697.1 98181 100118 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 98181..100118 Clostridium botulinum A str. ATCC 19397 5395346 YP_001382483.1 CDS CLB_0112 NC_009697.1 100283 101788 D identified by match to protein family HMM PF04286; hypothetical protein 100283..101788 Clostridium botulinum A str. ATCC 19397 5397071 YP_001382484.1 CDS CLB_0113 NC_009697.1 101939 102733 D identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010; TatD family hydrolase 101939..102733 Clostridium botulinum A str. ATCC 19397 5396112 YP_001382485.1 CDS CLB_0114 NC_009697.1 102961 104019 D identified by match to protein family HMM PF03990; match to protein family HMM PF06725; match to protein family HMM PF07501; hypothetical protein 102961..104019 Clostridium botulinum A str. ATCC 19397 5397145 YP_001382486.1 CDS CLB_0115 NC_009697.1 104092 104637 D identified by match to protein family HMM PF01751; match to protein family HMM TIGR00334; primase-like protein 104092..104637 Clostridium botulinum A str. ATCC 19397 5394942 YP_001382487.1 CDS ksgA NC_009697.1 104639 105466 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 104639..105466 Clostridium botulinum A str. ATCC 19397 5396459 YP_001382488.1 CDS CLB_0117 NC_009697.1 105545 106786 D hypothetical protein 105545..106786 Clostridium botulinum A str. ATCC 19397 5397670 YP_001382489.1 CDS CLB_0118 NC_009697.1 106943 107530 D hypothetical protein 106943..107530 Clostridium botulinum A str. ATCC 19397 5395839 YP_001382490.1 CDS CLB_0119 NC_009697.1 107699 108532 D lipoprotein 107699..108532 Clostridium botulinum A str. ATCC 19397 5395169 YP_001382491.1 CDS CLB_0120 NC_009697.1 108700 109761 D identified by match to protein family HMM TIGR01730; RND family marcrolide efflux protein 108700..109761 Clostridium botulinum A str. ATCC 19397 5398044 YP_001382492.1 CDS CLB_0121 NC_009697.1 109772 110467 D identified by match to protein family HMM PF00005; macrolide efflux ABC transporter ATP-binding protein 109772..110467 Clostridium botulinum A str. ATCC 19397 5396396 YP_001382493.1 CDS CLB_0122 NC_009697.1 110464 111672 D identified by match to protein family HMM PF02687; macrolide efflux ABC transporter permease 110464..111672 Clostridium botulinum A str. ATCC 19397 5396505 YP_001382494.1 CDS CLB_0123 NC_009697.1 111754 112596 D MRP protein-like protein 111754..112596 Clostridium botulinum A str. ATCC 19397 5396172 YP_001382495.1 CDS CLB_0124 NC_009697.1 112736 112927 D identified by match to protein family HMM PF00037; (Fe-S)-binding protein 112736..112927 Clostridium botulinum A str. ATCC 19397 5397933 YP_001382496.1 CDS CLB_0125 NC_009697.1 113002 113136 D identified by Glimmer3; hypothetical protein 113002..113136 Clostridium botulinum A str. ATCC 19397 5396710 YP_001382497.1 CDS CLB_0126 NC_009697.1 113373 113549 R identified by Glimmer3; hypothetical protein complement(113373..113549) Clostridium botulinum A str. ATCC 19397 5394976 YP_001382498.1 CDS CLB_0127 NC_009697.1 113627 114697 D identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase 113627..114697 Clostridium botulinum A str. ATCC 19397 5395102 YP_001382499.1 CDS CLB_0128 NC_009697.1 114754 115482 D identified by match to protein family HMM PF02308; mgtC family protein 114754..115482 Clostridium botulinum A str. ATCC 19397 5396084 YP_001382500.1 CDS nrdD NC_009697.1 115772 117913 D Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 115772..117913 Clostridium botulinum A str. ATCC 19397 5395715 YP_001382501.1 CDS nrdG NC_009697.1 117930 118445 D identified by match to protein family HMM TIGR02491; anaerobic ribonucleoside-triphosphate reductase activating protein 117930..118445 Clostridium botulinum A str. ATCC 19397 5395241 YP_001382502.1 CDS CLB_0131 NC_009697.1 118698 118844 R identified by Glimmer3; hypothetical protein complement(118698..118844) Clostridium botulinum A str. ATCC 19397 5395022 YP_001382503.1 CDS CLB_0132 NC_009697.1 118982 119656 R hypothetical protein complement(118982..119656) Clostridium botulinum A str. ATCC 19397 5394870 YP_001382504.1 CDS CLB_0133 NC_009697.1 119658 119996 R identified by match to protein family HMM PF03551; PadR family transcriptional regulator complement(119658..119996) Clostridium botulinum A str. ATCC 19397 5396092 YP_001382505.1 CDS CLB_0134 NC_009697.1 120117 120755 R zinc-dependent hydrolase complement(120117..120755) Clostridium botulinum A str. ATCC 19397 5396859 YP_001382506.1 CDS ileS NC_009697.1 121197 124313 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase 121197..124313 Clostridium botulinum A str. ATCC 19397 5398174 YP_001382507.1 CDS CLB_0136 NC_009697.1 124464 125462 D identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 124464..125462 Clostridium botulinum A str. ATCC 19397 5397396 YP_001382508.1 CDS CLB_0137 NC_009697.1 125678 129730 D hypothetical protein 125678..129730 Clostridium botulinum A str. ATCC 19397 5397795 YP_001382509.1 CDS CLB_0138 NC_009697.1 129805 130872 D identified by match to protein family HMM PF00483; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 129805..130872 Clostridium botulinum A str. ATCC 19397 5394786 YP_001382510.1 CDS CLB_0139 NC_009697.1 131208 132497 D identified by match to protein family HMM PF01969; match to protein family HMM TIGR00299; hypothetical protein 131208..132497 Clostridium botulinum A str. ATCC 19397 5396264 YP_001382511.1 CDS CLB_0140 NC_009697.1 132502 133308 D identified by match to protein family HMM PF01171; match to protein family HMM PF06508; match to protein family HMM TIGR00268; hypothetical protein 132502..133308 Clostridium botulinum A str. ATCC 19397 5396383 YP_001382512.1 CDS CLB_0141 NC_009697.1 133328 134074 D hypothetical protein 133328..134074 Clostridium botulinum A str. ATCC 19397 5397264 YP_001382513.1 CDS CLB_0142 NC_009697.1 134299 135681 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 134299..135681 Clostridium botulinum A str. ATCC 19397 5394920 YP_001382514.1 CDS CLB_0143 NC_009697.1 135868 137142 D identified by match to protein family HMM PF01547; sugar-binding protein 135868..137142 Clostridium botulinum A str. ATCC 19397 5396519 YP_001382515.1 CDS CLB_0144 NC_009697.1 137244 138359 R identified by match to protein family HMM PF00534; mannosyltransferase complement(137244..138359) Clostridium botulinum A str. ATCC 19397 5395584 YP_001382516.1 CDS CLB_0145 NC_009697.1 138525 139535 D identified by match to protein family HMM TIGR02906; spore coat protein 138525..139535 Clostridium botulinum A str. ATCC 19397 5396849 YP_001382517.1 CDS CLB_0146 NC_009697.1 139550 139744 D identified by Glimmer3; hypothetical protein 139550..139744 Clostridium botulinum A str. ATCC 19397 5397613 YP_001382518.1 CDS CLB_0147 NC_009697.1 139771 140538 D hypothetical protein 139771..140538 Clostridium botulinum A str. ATCC 19397 5396087 YP_001382519.1 CDS CLB_0148 NC_009697.1 140551 141564 D identified by match to protein family HMM TIGR02906; spore coat protein 140551..141564 Clostridium botulinum A str. ATCC 19397 5395600 YP_001382520.1 CDS CLB_0149 NC_009697.1 141919 143046 R identified by match to protein family HMM PF00534; glycoside hydrolase family protein complement(141919..143046) Clostridium botulinum A str. ATCC 19397 5396687 YP_001382521.1 CDS cotS NC_009697.1 143163 144167 D identified by match to protein family HMM TIGR02906; spore coat protein CotS 143163..144167 Clostridium botulinum A str. ATCC 19397 5396167 YP_001382522.1 CDS CLB_0151 NC_009697.1 144291 145193 D identified by match to protein family HMM PF05582; match to protein family HMM TIGR02855; peptidase family protein 144291..145193 Clostridium botulinum A str. ATCC 19397 5397276 YP_001382523.1 CDS CLB_0152 NC_009697.1 145389 145625 D identified by match to protein family HMM PF06257; hypothetical protein 145389..145625 Clostridium botulinum A str. ATCC 19397 5396833 YP_001382524.1 CDS CLB_0153 NC_009697.1 145729 147291 D identified by match to protein family HMM PF01476; LysM domain-containing protein 145729..147291 Clostridium botulinum A str. ATCC 19397 5396318 YP_001382525.1 CDS CLB_0154 NC_009697.1 147588 147701 D identified by Glimmer3; hypothetical protein 147588..147701 Clostridium botulinum A str. ATCC 19397 5397667 YP_001382526.1 CDS cphB NC_009697.1 147671 148471 D identified by match to protein family HMM PF03575; match to protein family HMM TIGR02069; cyanophycinase 147671..148471 Clostridium botulinum A str. ATCC 19397 5397535 YP_001382527.1 CDS cphA NC_009697.1 148515 151136 D catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase 148515..151136 Clostridium botulinum A str. ATCC 19397 5396109 YP_001382528.1 CDS ipk NC_009697.1 151229 152071 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 151229..152071 Clostridium botulinum A str. ATCC 19397 5397710 YP_001382529.1 CDS CLB_0158 NC_009697.1 152237 152434 D identified by Glimmer3; hypothetical protein 152237..152434 Clostridium botulinum A str. ATCC 19397 5396591 YP_001382530.1 CDS CLB_0159 NC_009697.1 152494 154014 D identified by match to protein family HMM PF03323; spore germination protein 152494..154014 Clostridium botulinum A str. ATCC 19397 5395745 YP_001382531.1 CDS CLB_0160 NC_009697.1 154034 155131 D identified by match to protein family HMM PF03845; match to protein family HMM TIGR00912; spore germination protein 154034..155131 Clostridium botulinum A str. ATCC 19397 5396341 YP_001382532.1 CDS CLB_0161 NC_009697.1 155181 156362 D identified by match to protein family HMM PF05504; match to protein family HMM TIGR02887; Ger(x)C family germination protein 155181..156362 Clostridium botulinum A str. ATCC 19397 5397423 YP_001382533.1 CDS CLB_0162 NC_009697.1 156435 157067 D identified by match to protein family HMM TIGR02837; stage II sporulation protein R 156435..157067 Clostridium botulinum A str. ATCC 19397 5398055 YP_001382534.1 CDS CLB_0163 NC_009697.1 157104 158345 R identified by match to protein family HMM PF04101; match to protein family HMM PF06925; hypothetical protein complement(157104..158345) Clostridium botulinum A str. ATCC 19397 5397007 YP_001382535.1 CDS ypeB NC_009697.1 158718 160088 D identified by match to protein family HMM PF03413; match to protein family HMM TIGR02889; germination protein YpeB 158718..160088 Clostridium botulinum A str. ATCC 19397 5396952 YP_001382536.1 CDS CLB_0165 NC_009697.1 160191 161171 D identified by match to protein family HMM PF02568; hypothetical protein 160191..161171 Clostridium botulinum A str. ATCC 19397 5396118 YP_001382537.1 CDS CLB_0166 NC_009697.1 161196 161624 D identified by match to protein family HMM PF09148; hypothetical protein 161196..161624 Clostridium botulinum A str. ATCC 19397 5396774 YP_001382538.1 CDS CLB_0167 NC_009697.1 161756 162055 D hypothetical protein 161756..162055 Clostridium botulinum A str. ATCC 19397 5395873 YP_001382539.1 CDS pyrG NC_009697.1 162289 163890 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 162289..163890 Clostridium botulinum A str. ATCC 19397 5394898 YP_001382540.1 CDS CLB_0169 NC_009697.1 164338 164682 D hypothetical protein 164338..164682 Clostridium botulinum A str. ATCC 19397 5398114 YP_001382541.1 CDS rho NC_009697.1 164854 166299 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 164854..166299 Clostridium botulinum A str. ATCC 19397 5397979 YP_001382542.1 CDS rpmE NC_009697.1 166339 166557 R identified by match to protein family HMM PF01197; match to protein family HMM TIGR00105; 50S ribosomal protein L31 complement(166339..166557) Clostridium botulinum A str. ATCC 19397 5397518 YP_001382543.1 CDS tdk NC_009697.1 166784 167359 D catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 166784..167359 Clostridium botulinum A str. ATCC 19397 5395865 YP_001382544.1 CDS CLB_0173 NC_009697.1 167376 168293 D identified by match to protein family HMM PF07136; hypothetical protein 167376..168293 Clostridium botulinum A str. ATCC 19397 5395258 YP_001382545.1 CDS CLB_0174 NC_009697.1 168301 169152 D identified by match to protein family HMM PF05175; match to protein family HMM TIGR00536; match to protein family HMM TIGR03387; HemK family modification methylase 168301..169152 Clostridium botulinum A str. ATCC 19397 5396070 YP_001382546.1 CDS prfA NC_009697.1 169234 170310 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 169234..170310 Clostridium botulinum A str. ATCC 19397 5395372 YP_001382547.1 CDS CLB_0176 NC_009697.1 170338 170946 D hypothetical protein 170338..170946 Clostridium botulinum A str. ATCC 19397 5395929 YP_001382548.1 CDS CLB_0177 NC_009697.1 171006 171725 D identified by match to protein family HMM PF02535; ZIP transporter family protein 171006..171725 Clostridium botulinum A str. ATCC 19397 5397188 YP_001382549.1 CDS CLB_0178 NC_009697.1 171746 172801 D identified by match to protein family HMM PF01300; match to protein family HMM PF03481; match to protein family HMM TIGR00057; Sua5/YciO/YrdC/YwlC family protein 171746..172801 Clostridium botulinum A str. ATCC 19397 5397761 YP_001382550.1 CDS CLB_0179 NC_009697.1 172810 173262 D identified by match to protein family HMM PF01451; low molecular weight protein tyrosine phosphatase 172810..173262 Clostridium botulinum A str. ATCC 19397 5396375 YP_001382551.1 CDS rpiB NC_009697.1 173322 173759 D catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 173322..173759 Clostridium botulinum A str. ATCC 19397 5397004 YP_001382552.1 CDS upp NC_009697.1 173789 174418 D Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 173789..174418 Clostridium botulinum A str. ATCC 19397 5396334 YP_001382553.1 CDS CLB_0182 NC_009697.1 174925 175413 D identified by match to protein family HMM PF00383; cytidine/deoxycytidylate deaminase family protein 174925..175413 Clostridium botulinum A str. ATCC 19397 5394706 YP_001382554.1 CDS tagO NC_009697.1 175521 176555 D identified by match to protein family HMM PF00953; UDP-GlcNAc:UDP-P GlcNAc 1-P transferase 175521..176555 Clostridium botulinum A str. ATCC 19397 5398051 YP_001382555.1 CDS mnaA NC_009697.1 176569 177726 D identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236; UDP-N-acetylglucosamine 2-epimerase 176569..177726 Clostridium botulinum A str. ATCC 19397 5396213 YP_001382556.1 CDS CLB_0185 NC_009697.1 178218 178586 D ATP synthase I 178218..178586 Clostridium botulinum A str. ATCC 19397 5396256 YP_001382557.1 CDS atpB NC_009697.1 178601 179281 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 178601..179281 Clostridium botulinum A str. ATCC 19397 5397849 YP_001382558.1 CDS atpE NC_009697.1 179321 179560 D produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 179321..179560 Clostridium botulinum A str. ATCC 19397 5396418 YP_001382559.1 CDS atpF NC_009697.1 179636 180115 D produces ATP from ADP in the presence of a proton gradient across the membrane; subunit B is part of the membrane proton channel; F0F1 ATP synthase subunit B 179636..180115 Clostridium botulinum A str. ATCC 19397 5396620 YP_001382560.1 CDS atpH NC_009697.1 180118 180657 D Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 180118..180657 Clostridium botulinum A str. ATCC 19397 5397393 YP_001382561.1 CDS atpA NC_009697.1 180668 182182 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 180668..182182 Clostridium botulinum A str. ATCC 19397 5395625 YP_001382562.1 CDS atpG NC_009697.1 182204 183052 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 182204..183052 Clostridium botulinum A str. ATCC 19397 5398029 YP_001382563.1 CDS atpD NC_009697.1 183066 184457 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 183066..184457 Clostridium botulinum A str. ATCC 19397 5394984 YP_001382564.1 CDS atpC NC_009697.1 184482 184883 D produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit epsilon 184482..184883 Clostridium botulinum A str. ATCC 19397 5395006 YP_001382565.1 CDS CLB_0194 NC_009697.1 185076 185783 D hypothetical protein 185076..185783 Clostridium botulinum A str. ATCC 19397 5394981 YP_001382566.1 CDS spoIID NC_009697.1 187333 188409 D identified by match to protein family HMM PF08486; match to protein family HMM TIGR02669; match to protein family HMM TIGR02870; stage II sporulation protein D 187333..188409 Clostridium botulinum A str. ATCC 19397 5397221 YP_001382567.1 CDS CLB_0198 NC_009697.1 188941 189687 D identified by match to protein family HMM PF01551; peptidase 188941..189687 Clostridium botulinum A str. ATCC 19397 5396104 YP_001382568.1 CDS spoIIID NC_009697.1 189795 190049 D identified by match to protein family HMM TIGR02844; stage III sporulation protein D 189795..190049 Clostridium botulinum A str. ATCC 19397 5397890 YP_001382569.1 CDS CLB_0200 NC_009697.1 190149 191177 D identified by match to protein family HMM PF02491; match to protein family HMM PF06723; match to protein family HMM TIGR00904; rod shape-determining protein Mbl 190149..191177 Clostridium botulinum A str. ATCC 19397 5397332 YP_001382570.1 CDS CLB_0201 NC_009697.1 191302 191826 R identified by match to protein family HMM PF06866; match to protein family HMM TIGR02841; hypothetical protein complement(191302..191826) Clostridium botulinum A str. ATCC 19397 5396948 YP_001382571.1 CDS CLB_0202 NC_009697.1 191875 192597 R identified by match to protein family HMM PF01171; hypothetical protein complement(191875..192597) Clostridium botulinum A str. ATCC 19397 5397150 YP_001382572.1 CDS metK NC_009697.1 193578 194753 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 193578..194753 Clostridium botulinum A str. ATCC 19397 5397301 YP_001382573.1 CDS CLB_0209 NC_009697.1 194944 197178 D identified by match to protein family HMM TIGR01448; recombinase D 194944..197178 Clostridium botulinum A str. ATCC 19397 5395703 YP_001382574.1 CDS CLB_0210 NC_009697.1 197204 198226 D hypothetical protein 197204..198226 Clostridium botulinum A str. ATCC 19397 5397428 YP_001382575.1 CDS CLB_0211 NC_009697.1 198199 198876 D identified by match to protein family HMM PF00156; ComF-like protein 198199..198876 Clostridium botulinum A str. ATCC 19397 5394605 YP_001382576.1 CDS yfiA NC_009697.1 199301 199828 D identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741; ribosomal subunit interface protein 199301..199828 Clostridium botulinum A str. ATCC 19397 5397172 YP_001382577.1 CDS secA NC_009697.1 200056 202563 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 200056..202563 Clostridium botulinum A str. ATCC 19397 5397389 YP_001382578.1 CDS prfB NC_009697.1 202927 203904 D catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA; peptide chain release factor 2 202927..203904 Clostridium botulinum A str. ATCC 19397 5395619 YP_001382579.1 CDS CLB_0215 NC_009697.1 204025 205389 R identified by match to protein family HMM PF04389; peptidase family protein complement(204025..205389) Clostridium botulinum A str. ATCC 19397 5396654 YP_001382580.1 CDS CLB_0216 NC_009697.1 205497 207653 D identified by match to protein family HMM PF00575; RNA-binding protein 205497..207653 Clostridium botulinum A str. ATCC 19397 5395049 YP_001382581.1 CDS CLB_0217 NC_009697.1 207937 208530 D hypothetical protein 207937..208530 Clostridium botulinum A str. ATCC 19397 5395078 YP_001382582.1 CDS CLB_0218 NC_009697.1 208941 210590 D hypothetical protein 208941..210590 Clostridium botulinum A str. ATCC 19397 5394928 YP_001382583.1 CDS CLB_0219 NC_009697.1 210611 210871 D hypothetical protein 210611..210871 Clostridium botulinum A str. ATCC 19397 5395588 YP_001382584.1 CDS CLB_0220 NC_009697.1 210885 211571 D identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein 210885..211571 Clostridium botulinum A str. ATCC 19397 5395510 YP_001382585.1 CDS CLB_0221 NC_009697.1 211655 211936 D identified by match to protein family HMM PF01022; ArsR family transcriptional regulator 211655..211936 Clostridium botulinum A str. ATCC 19397 5396133 YP_001382586.1 CDS CLB_0222 NC_009697.1 211976 214429 D identified by match to protein family HMM PF00070; match to protein family HMM PF00581; match to protein family HMM PF01206; match to protein family HMM PF02852; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase family protein 211976..214429 Clostridium botulinum A str. ATCC 19397 5394746 YP_001382587.1 CDS CLB_0223 NC_009697.1 214457 215311 R hypothetical protein complement(214457..215311) Clostridium botulinum A str. ATCC 19397 5394561 YP_001382588.1 CDS CLB_0224 NC_009697.1 215468 216256 D identified by match to protein family HMM PF04607; RelA/SpoT domain-containing protein 215468..216256 Clostridium botulinum A str. ATCC 19397 5396885 YP_001382589.1 CDS CLB_0225 NC_009697.1 216406 216519 D identified by Glimmer3; hypothetical protein 216406..216519 Clostridium botulinum A str. ATCC 19397 5396119 YP_001382590.1 CDS leuS NC_009697.1 216559 219000 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(216559..219000) Clostridium botulinum A str. ATCC 19397 5396762 YP_001382591.1 CDS CLB_0227 NC_009697.1 219377 219781 R identified by match to protein family HMM PF00581; hypothetical protein complement(219377..219781) Clostridium botulinum A str. ATCC 19397 5396625 YP_001382592.1 CDS CLB_0229 NC_009697.1 220095 220619 R hypothetical protein complement(220095..220619) Clostridium botulinum A str. ATCC 19397 5395558 YP_001382593.1 CDS CLB_0230 NC_009697.1 220644 221243 R identified by match to protein family HMM PF00226; match to protein family HMM PF07719; DnaJ family molecular chaperone complement(220644..221243) Clostridium botulinum A str. ATCC 19397 5395038 YP_001382594.1 CDS CLB_0231 NC_009697.1 221230 222078 R hypothetical protein complement(221230..222078) Clostridium botulinum A str. ATCC 19397 5397964 YP_001382595.1 CDS CLB_0232 NC_009697.1 222109 222648 R identified by match to protein family HMM PF01928; adenylyl cyclase CyaB complement(222109..222648) Clostridium botulinum A str. ATCC 19397 5396339 YP_001382596.1 CDS CLB_0233 NC_009697.1 222955 223992 D hypothetical protein 222955..223992 Clostridium botulinum A str. ATCC 19397 5396660 YP_001382597.1 CDS fba NC_009697.1 224265 225191 R identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; match to protein family HMM TIGR01859; fructose-1,6-bisphosphate aldolase complement(224265..225191) Clostridium botulinum A str. ATCC 19397 5396884 YP_001382598.1 CDS CLB_0235 NC_009697.1 225417 225701 R hypothetical protein complement(225417..225701) Clostridium botulinum A str. ATCC 19397 5396173 YP_001382599.1 CDS CLB_0236 NC_009697.1 225818 226486 R identified by match to protein family HMM PF04239; hypothetical protein complement(225818..226486) Clostridium botulinum A str. ATCC 19397 5396224 YP_001382600.1 CDS CLB_0237 NC_009697.1 226611 228269 D identified by match to protein family HMM PF00485; threonyl-tRNA synthetase/uridine kinase 226611..228269 Clostridium botulinum A str. ATCC 19397 5394690 YP_001382601.1 CDS CLB_0238 NC_009697.1 228407 228538 D identified by Glimmer3; hypothetical protein 228407..228538 Clostridium botulinum A str. ATCC 19397 5394586 YP_001382602.1 CDS pssA NC_009697.1 228639 229160 R identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; CDP-diacylglycerol--serine O-phosphatidyltransferase complement(228639..229160) Clostridium botulinum A str. ATCC 19397 5397169 YP_001382603.1 CDS CLB_0240 NC_009697.1 229347 229763 D identified by match to protein family HMM PF00571; hypothetical protein 229347..229763 Clostridium botulinum A str. ATCC 19397 5394741 YP_001382604.1 CDS CLB_0241 NC_009697.1 229869 230753 D similar to YegS from E. coli; lipid kinase 229869..230753 Clostridium botulinum A str. ATCC 19397 5396951 YP_001382605.1 CDS CLB_0242 NC_009697.1 230827 231471 D hypothetical protein 230827..231471 Clostridium botulinum A str. ATCC 19397 5397129 YP_001382606.1 CDS CLB_0243 NC_009697.1 231563 233500 R identified by match to protein family HMM PF04055; match to protein family HMM PF08497; hypothetical protein complement(231563..233500) Clostridium botulinum A str. ATCC 19397 5396445 YP_001382607.1 CDS CLB_0244 NC_009697.1 234095 235360 D identified by match to protein family HMM PF00571; match to protein family HMM PF03448; match to protein family HMM PF05239; PRC-barrel domain/MgtE domain/CBS domain-containing protein 234095..235360 Clostridium botulinum A str. ATCC 19397 5394648 YP_001382608.1 CDS sleB NC_009697.1 235590 236285 D identified by match to protein family HMM PF01471; match to protein family HMM PF07486; match to protein family HMM TIGR02869; spore-cortex-lytic enzyme 235590..236285 Clostridium botulinum A str. ATCC 19397 5395004 YP_001382609.1 CDS cysK-1 NC_009697.1 236649 237563 D identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; cysteine synthase A 236649..237563 Clostridium botulinum A str. ATCC 19397 5394883 YP_001382610.1 CDS cysE NC_009697.1 237578 238174 D identified by match to protein family HMM PF00132; match to protein family HMM TIGR01172; serine O-acetyltransferase 237578..238174 Clostridium botulinum A str. ATCC 19397 5394580 YP_001382611.1 CDS CLB_0248 NC_009697.1 238196 239161 D identified by match to protein family HMM PF00037; match to protein family HMM PF08331; (Fe-S)-binding protein 238196..239161 Clostridium botulinum A str. ATCC 19397 5397084 YP_001382612.1 CDS CLB_0249 NC_009697.1 239309 240010 D identified by match to protein family HMM PF01553; 1-acyl-sn-glycerol-3-phosphate acyltransferase 239309..240010 Clostridium botulinum A str. ATCC 19397 5398202 YP_001382613.1 CDS nth NC_009697.1 240103 240744 D identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083; endonuclease III 240103..240744 Clostridium botulinum A str. ATCC 19397 5395656 YP_001382614.1 CDS CLB_0251 NC_009697.1 241078 242250 D identified by match to protein family HMM PF00390; match to protein family HMM PF03949; malic enzyme 241078..242250 Clostridium botulinum A str. ATCC 19397 5395581 YP_001382615.1 CDS CLB_0252 NC_009697.1 242277 243506 R identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00177; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200; competence damage-inducible protein A complement(242277..243506) Clostridium botulinum A str. ATCC 19397 5398064 YP_001382616.1 CDS CLB_0253 NC_009697.1 243532 244515 R hypothetical protein complement(243532..244515) Clostridium botulinum A str. ATCC 19397 5395531 YP_001382617.1 CDS CLB_0254 NC_009697.1 244625 245659 R identified by match to protein family HMM PF05343; glutamyl aminopeptidase family protein complement(244625..245659) Clostridium botulinum A str. ATCC 19397 5397153 YP_001382618.1 CDS CLB_0255 NC_009697.1 245811 246947 D identified by match to protein family HMM PF04294; von Willebrand factor A 245811..246947 Clostridium botulinum A str. ATCC 19397 5397194 YP_001382619.1 CDS CLB_0256 NC_009697.1 247152 248504 D identified by match to protein family HMM PF04294; match to protein family HMM PF07501; von Willebrand factor A 247152..248504 Clostridium botulinum A str. ATCC 19397 5398159 YP_001382620.1 CDS splB NC_009697.1 248651 249658 D identified by match to protein family HMM PF04055; spore photoproduct lyase 248651..249658 Clostridium botulinum A str. ATCC 19397 5397491 YP_001382621.1 CDS CLB_0258 NC_009697.1 249786 250253 D identified by match to protein family HMM PF00588; match to protein family HMM TIGR00185; hypothetical protein 249786..250253 Clostridium botulinum A str. ATCC 19397 5396390 YP_001382622.1 CDS CLB_0259 NC_009697.1 250266 251105 D identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762; DegV family protein 250266..251105 Clostridium botulinum A str. ATCC 19397 5397808 YP_001382623.1 CDS CLB_0260 NC_009697.1 251399 252502 D identified by match to protein family HMM PF02608; Bmp family lipoprotein 251399..252502 Clostridium botulinum A str. ATCC 19397 5396580 YP_001382624.1 CDS CLB_0261 NC_009697.1 252668 254218 D identified by match to protein family HMM PF00005; sugar ABC transporter, ATP-binding protein 252668..254218 Clostridium botulinum A str. ATCC 19397 5396715 YP_001382625.1 CDS CLB_0262 NC_009697.1 254220 255323 D identified by match to protein family HMM PF02653; sugar ABC transporter permease 254220..255323 Clostridium botulinum A str. ATCC 19397 5396943 YP_001382626.1 CDS CLB_0263 NC_009697.1 255316 256242 D identified by match to protein family HMM PF02653; sugar ABC transporter permease 255316..256242 Clostridium botulinum A str. ATCC 19397 5397021 YP_001382627.1 CDS CLB_0264 NC_009697.1 256354 257079 D identified by match to protein family HMM PF01522; polysaccharide deacetylase 256354..257079 Clostridium botulinum A str. ATCC 19397 5397082 YP_001382628.1 CDS rpoN NC_009697.1 257408 258781 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 257408..258781 Clostridium botulinum A str. ATCC 19397 5396046 YP_001382629.1 CDS cggR NC_009697.1 259069 260100 D identified by match to protein family HMM PF04198; central glycolytic genes regulator 259069..260100 Clostridium botulinum A str. ATCC 19397 5394590 YP_001382630.1 CDS gap-1 NC_009697.1 260178 261185 D identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; glyceraldehyde-3-phosphate dehydrogenase, type I 260178..261185 Clostridium botulinum A str. ATCC 19397 5394602 YP_001382631.1 CDS pgk NC_009697.1 261482 262678 D Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 261482..262678 Clostridium botulinum A str. ATCC 19397 5394884 YP_001382632.1 CDS tpiA NC_009697.1 262740 263486 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 262740..263486 Clostridium botulinum A str. ATCC 19397 5396121 YP_001382633.1 CDS gpmI NC_009697.1 263578 265107 D catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 263578..265107 Clostridium botulinum A str. ATCC 19397 5396732 YP_001382634.1 CDS eno NC_009697.1 265163 266458 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 265163..266458 Clostridium botulinum A str. ATCC 19397 5397841 YP_001382635.1 CDS secG NC_009697.1 266681 266914 D identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810; preprotein translocase subunit SecG 266681..266914 Clostridium botulinum A str. ATCC 19397 5396641 YP_001382636.1 CDS rnr NC_009697.1 267123 269300 D identified by match to protein family HMM PF00575; match to protein family HMM PF00773; match to protein family HMM PF08206; match to protein family HMM TIGR00358; match to protein family HMM TIGR02063; ribonuclease R 267123..269300 Clostridium botulinum A str. ATCC 19397 5395734 YP_001382637.1 CDS surE NC_009697.1 269709 270467 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 269709..270467 Clostridium botulinum A str. ATCC 19397 5397134 YP_001382638.1 CDS smpB NC_009697.1 270724 271194 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 270724..271194 Clostridium botulinum A str. ATCC 19397 5397609 YP_001382639.1 CDS CLB_0276 NC_009697.1 271333 272496 R identified by match to protein family HMM PF00375; sodium:dicarboxylate symporter family protein complement(271333..272496) Clostridium botulinum A str. ATCC 19397 5395092 YP_001382640.1 CDS CLB_0278 NC_009697.1 274431 275762 D identified by match to protein family HMM PF01565; match to protein family HMM PF08031; FAD-binding protein 274431..275762 Clostridium botulinum A str. ATCC 19397 5397288 YP_001382641.1 CDS CLB_0280 NC_009697.1 275919 276050 D identified by Glimmer3; hypothetical protein 275919..276050 Clostridium botulinum A str. ATCC 19397 5394866 YP_001382642.1 CDS CLB_0281 NC_009697.1 276441 276599 D identified by Glimmer3; hypothetical protein 276441..276599 Clostridium botulinum A str. ATCC 19397 5396616 YP_001382643.1 CDS CLB_0282 NC_009697.1 276613 276762 R identified by Glimmer3; hypothetical protein complement(276613..276762) Clostridium botulinum A str. ATCC 19397 5397283 YP_001382644.1 CDS CLB_0284 NC_009697.1 277737 279161 D identified by match to protein family HMM PF00282; amino acid decarboxylase 277737..279161 Clostridium botulinum A str. ATCC 19397 5395999 YP_001382645.1 CDS CLB_0285 NC_009697.1 279349 280200 D identified by match to protein family HMM PF00669; match to protein family HMM PF00700; flagellin protein 279349..280200 Clostridium botulinum A str. ATCC 19397 5396211 YP_001382646.1 CDS CLB_0286 NC_009697.1 280559 282178 D identified by match to protein family HMM PF01569; vanadium-dependent haloperoxidase 280559..282178 Clostridium botulinum A str. ATCC 19397 5397461 YP_001382647.1 CDS CLB_0287 NC_009697.1 282562 283221 D identified by match to protein family HMM PF07883; hypothetical protein 282562..283221 Clostridium botulinum A str. ATCC 19397 5396260 YP_001382648.1 CDS CLB_0288 NC_009697.1 283562 284671 D hypothetical protein 283562..284671 Clostridium botulinum A str. ATCC 19397 5397212 YP_001382649.1 CDS CLB_0289 NC_009697.1 285173 286345 D identified by match to protein family HMM PF00390; match to protein family HMM PF01262; match to protein family HMM PF03949; malic enzyme 285173..286345 Clostridium botulinum A str. ATCC 19397 5396492 YP_001382650.1 CDS kdgT NC_009697.1 286557 287531 D transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease 286557..287531 Clostridium botulinum A str. ATCC 19397 5394735 YP_001382651.1 CDS CLB_0291 NC_009697.1 287745 289367 D identified by match to protein family HMM PF02518; sensor histidine kinase 287745..289367 Clostridium botulinum A str. ATCC 19397 5396659 YP_001382652.1 CDS CLB_0292 NC_009697.1 289345 290019 D identified by match to protein family HMM PF00072; response regulator 289345..290019 Clostridium botulinum A str. ATCC 19397 5395925 YP_001382653.1 CDS lysP NC_009697.1 290576 292039 D identified by match to protein family HMM PF00324; lysine-specific permease 290576..292039 Clostridium botulinum A str. ATCC 19397 5398103 YP_001382654.1 CDS CLB_0294 NC_009697.1 292583 293317 D identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 292583..293317 Clostridium botulinum A str. ATCC 19397 5396075 YP_001382655.1 CDS CLB_0295 NC_009697.1 293431 293943 D identified by match to protein family HMM PF00583; acetyltransferase 293431..293943 Clostridium botulinum A str. ATCC 19397 5397715 YP_001382656.1 CDS CLB_0296 NC_009697.1 293969 294346 D identified by match to protein family HMM PF00383; cytidine/deoxycytidylate deaminase family protein 293969..294346 Clostridium botulinum A str. ATCC 19397 5398192 YP_001382657.1 CDS CLB_0297 NC_009697.1 294505 295407 D identified by match to protein family HMM PF00583; acetyltransferase 294505..295407 Clostridium botulinum A str. ATCC 19397 5395434 YP_001382658.1 CDS CLB_0298 NC_009697.1 295433 295957 D identified by match to protein family HMM PF01872; riboflavin biosynthesis protein RibD domain-containing protein 295433..295957 Clostridium botulinum A str. ATCC 19397 5395440 YP_001382659.1 CDS CLB_0299 NC_009697.1 296020 296949 D 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 296020..296949 Clostridium botulinum A str. ATCC 19397 5395554 YP_001382660.1 CDS CLB_0300 NC_009697.1 297025 297138 D identified by Glimmer3; hypothetical protein 297025..297138 Clostridium botulinum A str. ATCC 19397 5395211 YP_001382661.1 CDS CLB_0301 NC_009697.1 297450 298124 R identified by match to protein family HMM PF00857; isochorismate family protein complement(297450..298124) Clostridium botulinum A str. ATCC 19397 5395809 YP_001382662.1 CDS CLB_0302 NC_009697.1 298551 300881 D identified by match to protein family HMM PF01315; match to protein family HMM PF02738; xanthine dehydrogenase family protein, molybdopterin-binding subunit 298551..300881 Clostridium botulinum A str. ATCC 19397 5396178 YP_001382663.1 CDS CLB_0303 NC_009697.1 300881 301720 D identified by match to protein family HMM PF00941; xanthine dehydrogenase family protein, FAD-binding subunit 300881..301720 Clostridium botulinum A str. ATCC 19397 5395755 YP_001382664.1 CDS CLB_0304 NC_009697.1 301717 302190 D identified by match to protein family HMM PF00111; match to protein family HMM PF01799; xanthine dehydrogenase family protein, iron-sulfur-binding subunit 301717..302190 Clostridium botulinum A str. ATCC 19397 5396337 YP_001382665.1 CDS CLB_0305 NC_009697.1 302547 303017 D identified by Glimmer3; hypothetical protein 302547..303017 Clostridium botulinum A str. ATCC 19397 5395819 YP_001382666.1 CDS CLB_0306 NC_009697.1 303028 303711 D identified by match to protein family HMM PF02683; cytochrome c-type biogenesis protein CcdA 303028..303711 Clostridium botulinum A str. ATCC 19397 5395144 YP_001382667.1 CDS CLB_0307 NC_009697.1 303733 304299 D identified by match to protein family HMM PF00085; match to protein family HMM PF00578; match to protein family HMM PF08534; thiol-disulfide oxidoreductase ResA 303733..304299 Clostridium botulinum A str. ATCC 19397 5398069 YP_001382668.1 CDS CLB_0308 NC_009697.1 304324 305001 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 304324..305001 Clostridium botulinum A str. ATCC 19397 5395831 YP_001382669.1 CDS CLB_0309 NC_009697.1 304973 306391 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 304973..306391 Clostridium botulinum A str. ATCC 19397 5397748 YP_001382670.1 CDS glvA-1 NC_009697.1 308150 309475 D identified by match to protein family HMM PF02056; maltose-6'-phosphate glucosidase 308150..309475 Clostridium botulinum A str. ATCC 19397 5394985 YP_001382671.1 CDS CLB_0312 NC_009697.1 309638 311161 D identified by match to protein family HMM PF00367; match to protein family HMM PF02378; PTS system maltose/glucose-specfic transporter subunit IIBC 309638..311161 Clostridium botulinum A str. ATCC 19397 5396236 YP_001382672.1 CDS CLB_0313 NC_009697.1 311212 311979 R identified by match to protein family HMM PF01380; match to protein family HMM PF01418; RpiR family transcriptional regulator complement(311212..311979) Clostridium botulinum A str. ATCC 19397 5395549 YP_001382673.1 CDS CLB_0314 NC_009697.1 311995 312774 R identified by match to protein family HMM PF01380; match to protein family HMM PF01418; RpiR family transcriptional regulator complement(311995..312774) Clostridium botulinum A str. ATCC 19397 5396059 YP_001382674.1 CDS CLB_0315 NC_009697.1 313050 313532 D identified by match to protein family HMM PF00358; match to protein family HMM TIGR00830; PTS system glucose family transporter subunit IIA 313050..313532 Clostridium botulinum A str. ATCC 19397 5395283 YP_001382675.1 CDS CLB_0316 NC_009697.1 313630 314406 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 313630..314406 Clostridium botulinum A str. ATCC 19397 5396197 YP_001382676.1 CDS CLB_0317 NC_009697.1 314416 315465 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 314416..315465 Clostridium botulinum A str. ATCC 19397 5395918 YP_001382677.1 CDS CLB_0318 NC_009697.1 315585 316355 D identified by match to protein family HMM PF00005; peptide ABC transporter ATP-binding protein 315585..316355 Clostridium botulinum A str. ATCC 19397 5398132 YP_001382678.1 CDS CLB_0319 NC_009697.1 316369 318339 D identified by match to protein family HMM PF02687; peptide ABC transporter permease 316369..318339 Clostridium botulinum A str. ATCC 19397 5397414 YP_001382679.1 CDS alr NC_009697.1 318579 319793 D converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 318579..319793 Clostridium botulinum A str. ATCC 19397 5395919 YP_001382680.1 CDS CLB_0321 NC_009697.1 320313 321884 D identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; PTS system glucose/glucoside family transporter subunit IIBC 320313..321884 Clostridium botulinum A str. ATCC 19397 5395783 YP_001382681.1 CDS glvA-2 NC_009697.1 322200 323525 D identified by match to protein family HMM PF02056; maltose-6'-phosphate glucosidase 322200..323525 Clostridium botulinum A str. ATCC 19397 5396595 YP_001382682.1 CDS CLB_0323 NC_009697.1 323839 324348 D identified by match to protein family HMM PF00358; match to protein family HMM TIGR00830; PTS system glucose/glucoside family transporter subunit IIA 323839..324348 Clostridium botulinum A str. ATCC 19397 5398025 YP_001382683.1 CDS CLB_0324 NC_009697.1 324631 325392 D identified by match to protein family HMM PF01380; match to protein family HMM PF01418; SIS domain-containing protein 324631..325392 Clostridium botulinum A str. ATCC 19397 5397255 YP_001382684.1 CDS CLB_0325 NC_009697.1 325429 325611 R hypothetical protein complement(325429..325611) Clostridium botulinum A str. ATCC 19397 5395019 YP_001382685.1 CDS CLB_0326 NC_009697.1 325880 326077 D identified by match to protein family HMM PF00313; cold shock protein 325880..326077 Clostridium botulinum A str. ATCC 19397 5396025 YP_001382686.1 CDS CLB_0327 NC_009697.1 326420 326974 D identified by match to protein family HMM PF06210; hypothetical protein 326420..326974 Clostridium botulinum A str. ATCC 19397 5396945 YP_001382687.1 CDS CLB_0328 NC_009697.1 327409 327840 D identified by match to protein family HMM PF02082; rrf2 family protein 327409..327840 Clostridium botulinum A str. ATCC 19397 5397156 YP_001382688.1 CDS CLB_0329 NC_009697.1 327992 328597 D identified by match to protein family HMM PF01323; 2-hydroxychromene-2-carboxylate isomerase 327992..328597 Clostridium botulinum A str. ATCC 19397 5395121 YP_001382689.1 CDS CLB_0330 NC_009697.1 328624 329262 D hypothetical protein 328624..329262 Clostridium botulinum A str. ATCC 19397 5395358 YP_001382690.1 CDS CLB_0331 NC_009697.1 329700 330461 D identified by match to protein family HMM PF01380; match to protein family HMM PF01418; transcriptional regulator 329700..330461 Clostridium botulinum A str. ATCC 19397 5397957 YP_001382691.1 CDS CLB_0332 NC_009697.1 330580 332163 D identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; PTS system glucose/maltose-specfic transporter subunit IIBC 330580..332163 Clostridium botulinum A str. ATCC 19397 5396511 YP_001382692.1 CDS glvA-3 NC_009697.1 332425 333759 D identified by match to protein family HMM PF02056; maltose-6'-phosphate glucosidase 332425..333759 Clostridium botulinum A str. ATCC 19397 5397981 YP_001382693.1 CDS CLB_0334 NC_009697.1 333772 334245 D identified by match to protein family HMM PF00358; match to protein family HMM TIGR00830; PTS system glucose/maltose-specific transporter subunit IIA 333772..334245 Clostridium botulinum A str. ATCC 19397 5394765 YP_001382694.1 CDS ilvD NC_009697.1 334383 336098 D identified by match to protein family HMM PF00920; dihydroxy-acid dehydratase 334383..336098 Clostridium botulinum A str. ATCC 19397 5396959 YP_001382695.1 CDS eda NC_009697.1 336150 336797 D identified by match to protein family HMM PF01081; match to protein family HMM TIGR01182; 2-dehydro-3-deoxyphosphogluconate aldolase 336150..336797 Clostridium botulinum A str. ATCC 19397 5396288 YP_001382696.1 CDS CLB_0337 NC_009697.1 336799 337803 D identified by match to protein family HMM PF00294; 2-dehydro-3-deoxygluconokinase 336799..337803 Clostridium botulinum A str. ATCC 19397 5397866 YP_001382697.1 CDS ade NC_009697.1 338063 339862 D identified by match to protein family HMM PF01979; match to protein family HMM TIGR01178; adenine deaminase 338063..339862 Clostridium botulinum A str. ATCC 19397 5395249 YP_001382698.1 CDS CLB_0339 NC_009697.1 340264 340941 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 340264..340941 Clostridium botulinum A str. ATCC 19397 5397835 YP_001382699.1 CDS CLB_0340 NC_009697.1 340938 342326 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 340938..342326 Clostridium botulinum A str. ATCC 19397 5395039 YP_001382700.1 CDS CLB_0341 NC_009697.1 342723 343691 D identified by match to protein family HMM PF00535; glycosyl transferase family protein 342723..343691 Clostridium botulinum A str. ATCC 19397 5397860 YP_001382701.1 CDS CLB_0342 NC_009697.1 343675 344094 D identified by match to protein family HMM PF04138; cell wall teichoic acid glycosylation protein GtcA 343675..344094 Clostridium botulinum A str. ATCC 19397 5395444 YP_001382702.1 CDS CLB_0343 NC_009697.1 344213 346486 D identified by match to protein family HMM PF02366; dolichyl-phosphate-mannose-protein mannosyltransferase family protein 344213..346486 Clostridium botulinum A str. ATCC 19397 5398087 YP_001382703.1 CDS CLB_0344 NC_009697.1 346926 347864 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 346926..347864 Clostridium botulinum A str. ATCC 19397 5396305 YP_001382704.1 CDS CLB_0345 NC_009697.1 348128 349159 D identified by match to protein family HMM PF01497; iron ABC transporter substrate-binding protein 348128..349159 Clostridium botulinum A str. ATCC 19397 5396918 YP_001382705.1 CDS CLB_0346 NC_009697.1 349162 350280 D identified by match to protein family HMM PF01032; iron ABC transporter permease 349162..350280 Clostridium botulinum A str. ATCC 19397 5398111 YP_001382706.1 CDS CLB_0347 NC_009697.1 350282 351052 D identified by match to protein family HMM PF00005; iron ABC transporter ATP-binding protein 350282..351052 Clostridium botulinum A str. ATCC 19397 5397368 YP_001382707.1 CDS CLB_0348 NC_009697.1 351088 352416 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 351088..352416 Clostridium botulinum A str. ATCC 19397 5397633 YP_001382708.1 CDS CLB_0349 NC_009697.1 352561 353574 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(352561..353574) Clostridium botulinum A str. ATCC 19397 5396255 YP_001382709.1 CDS CLB_0350 NC_009697.1 353979 354917 D identified by similarity to SP:P37580; match to protein family HMM PF01497; iron ABC transporter substrate-binding protein 353979..354917 Clostridium botulinum A str. ATCC 19397 5395175 YP_001382710.1 CDS CLB_0351 NC_009697.1 354978 355094 D identified by Glimmer3; hypothetical protein 354978..355094 Clostridium botulinum A str. ATCC 19397 5395520 YP_001382711.1 CDS CLB_0352 NC_009697.1 355256 356224 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(355256..356224) Clostridium botulinum A str. ATCC 19397 5397127 YP_001382712.1 CDS CLB_0353 NC_009697.1 356542 357471 D identified by match to protein family HMM PF01497; iron ABC transporter substrate-binding protein 356542..357471 Clostridium botulinum A str. ATCC 19397 5396572 YP_001382713.1 CDS CLB_0354 NC_009697.1 357498 358526 D identified by match to protein family HMM PF01032; iron ABC transporter permease 357498..358526 Clostridium botulinum A str. ATCC 19397 5395028 YP_001382714.1 CDS CLB_0355 NC_009697.1 358523 359536 D identified by match to protein family HMM PF01032; iron ABC transporter permease 358523..359536 Clostridium botulinum A str. ATCC 19397 5395421 YP_001382715.1 CDS CLB_0356 NC_009697.1 359547 360377 D identified by match to protein family HMM PF00005; iron ABC transporter ATP-binding protein 359547..360377 Clostridium botulinum A str. ATCC 19397 5394889 YP_001382716.1 CDS CLB_0357 NC_009697.1 360374 362098 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 360374..362098 Clostridium botulinum A str. ATCC 19397 5397743 YP_001382717.1 CDS CLB_0358 NC_009697.1 362152 362532 R identified by match to protein family HMM PF01325; iron-dependent repressor complement(362152..362532) Clostridium botulinum A str. ATCC 19397 5395522 YP_001382718.1 CDS CLB_0359 NC_009697.1 363231 364532 D identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; match to protein family HMM TIGR03173; xanthine/uracil permease family protein 363231..364532 Clostridium botulinum A str. ATCC 19397 5397382 YP_001382719.1 CDS xpt-1 NC_009697.1 364555 365127 D Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase 364555..365127 Clostridium botulinum A str. ATCC 19397 5397542 YP_001382720.1 CDS CLB_0361 NC_009697.1 365578 366270 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 365578..366270 Clostridium botulinum A str. ATCC 19397 5396308 YP_001382721.1 CDS CLB_0362 NC_009697.1 366283 367263 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 366283..367263 Clostridium botulinum A str. ATCC 19397 5396862 YP_001382722.1 CDS CLB_0363 NC_009697.1 367439 368296 D BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters UDP disphosphate which reduces the pool of lipid carrier available to the cell; UDP pyrophosphate phosphatase 367439..368296 Clostridium botulinum A str. ATCC 19397 5397320 YP_001382723.1 CDS CLB_0364 NC_009697.1 368311 369057 D identified by match to protein family HMM PF00005; peptide ABC transporter ATP-binding protein 368311..369057 Clostridium botulinum A str. ATCC 19397 5397182 YP_001382724.1 CDS CLB_0365 NC_009697.1 369057 370919 D identified by match to protein family HMM PF02687; peptide ABC transporter permease 369057..370919 Clostridium botulinum A str. ATCC 19397 5397625 YP_001382725.1 CDS CLB_0366 NC_009697.1 370943 371089 D identified by Glimmer3; hypothetical protein 370943..371089 Clostridium botulinum A str. ATCC 19397 5395287 YP_001382726.1 CDS CLB_0367 NC_009697.1 371403 371759 D identified by match to protein family HMM PF03788; LrgA family protein 371403..371759 Clostridium botulinum A str. ATCC 19397 5395539 YP_001382727.1 CDS CLB_0368 NC_009697.1 371762 372457 D identified by match to protein family HMM PF04172; lrgB-like family protein 371762..372457 Clostridium botulinum A str. ATCC 19397 5394832 YP_001382728.1 CDS CLB_0369 NC_009697.1 372753 373403 D lipoprotein 372753..373403 Clostridium botulinum A str. ATCC 19397 5396892 YP_001382729.1 CDS CLB_0370 NC_009697.1 373787 374686 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 373787..374686 Clostridium botulinum A str. ATCC 19397 5397544 YP_001382730.1 CDS CLB_0371 NC_009697.1 374821 376329 D identified by match to protein family HMM PF08903; hypothetical protein 374821..376329 Clostridium botulinum A str. ATCC 19397 5396681 YP_001382731.1 CDS CLB_0372 NC_009697.1 376653 377204 D hypothetical protein 376653..377204 Clostridium botulinum A str. ATCC 19397 5397807 YP_001382732.1 CDS CLB_0373 NC_009697.1 377383 377850 D hypothetical protein 377383..377850 Clostridium botulinum A str. ATCC 19397 5395337 YP_001382733.1 CDS CLB_0374 NC_009697.1 377843 378532 D identified by match to protein family HMM PF04647; accessory gene regulator protein B 377843..378532 Clostridium botulinum A str. ATCC 19397 5395960 YP_001382734.1 CDS CLB_0375 NC_009697.1 378516 378650 D lipoprotein 378516..378650 Clostridium botulinum A str. ATCC 19397 5395777 YP_001382735.1 CDS CLB_0376 NC_009697.1 378722 380425 D identified by match to protein family HMM PF00990; match to protein family HMM PF01966; match to protein family HMM TIGR00254; diguanylate cyclase 378722..380425 Clostridium botulinum A str. ATCC 19397 5396954 YP_001382736.1 CDS CLB_0377 NC_009697.1 380656 381165 D identified by match to protein family HMM PF00583; acetyltransferase 380656..381165 Clostridium botulinum A str. ATCC 19397 5394670 YP_001382737.1 CDS CLB_0378 NC_009697.1 381562 382014 D hypothetical protein 381562..382014 Clostridium botulinum A str. ATCC 19397 5397555 YP_001382738.1 CDS CLB_0379 NC_009697.1 382041 383888 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensory box histidine kinase 382041..383888 Clostridium botulinum A str. ATCC 19397 5396365 YP_001382739.1 CDS CLB_0380 NC_009697.1 384147 384584 D hypothetical protein 384147..384584 Clostridium botulinum A str. ATCC 19397 5395496 YP_001382740.1 CDS CLB_0381 NC_009697.1 384571 385200 D identified by match to protein family HMM PF04647; accessory gene regulator protein B 384571..385200 Clostridium botulinum A str. ATCC 19397 5394624 YP_001382741.1 CDS CLB_0382 NC_009697.1 385295 385429 D identified by Glimmer3; hypothetical protein 385295..385429 Clostridium botulinum A str. ATCC 19397 5396296 YP_001382742.1 CDS CLB_0383 NC_009697.1 385510 387363 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensory box histidine kinase 385510..387363 Clostridium botulinum A str. ATCC 19397 5394547 YP_001382743.1 CDS CLB_0384 NC_009697.1 387596 388462 D identified by match to protein family HMM PF01171; PP-loop family protein 387596..388462 Clostridium botulinum A str. ATCC 19397 5397739 YP_001382744.1 CDS CLB_0385 NC_009697.1 388586 389131 R identified by match to protein family HMM PF01381; match to protein family HMM PF07883; DNA-binding protein complement(388586..389131) Clostridium botulinum A str. ATCC 19397 5395712 YP_001382745.1 CDS CLB_0386 NC_009697.1 389486 390892 D identified by match to protein family HMM PF00324; amino acid permease 389486..390892 Clostridium botulinum A str. ATCC 19397 5394668 YP_001382746.1 CDS CLB_0387 NC_009697.1 391011 392093 D identified by match to protein family HMM PF00557; match to protein family HMM PF01321; M24 family metallopeptidase 391011..392093 Clostridium botulinum A str. ATCC 19397 5395020 YP_001382747.1 CDS adhE NC_009697.1 392521 395109 D identified by match to protein family HMM PF00171; match to protein family HMM PF00465; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 392521..395109 Clostridium botulinum A str. ATCC 19397 5396473 YP_001382748.1 CDS CLB_0389 NC_009697.1 395428 395715 D hypothetical protein 395428..395715 Clostridium botulinum A str. ATCC 19397 5397902 YP_001382749.1 CDS CLB_0390 NC_009697.1 395778 396368 D hypothetical protein 395778..396368 Clostridium botulinum A str. ATCC 19397 5395557 YP_001382750.1 CDS CLB_0391 NC_009697.1 396644 397123 R hypothetical protein complement(396644..397123) Clostridium botulinum A str. ATCC 19397 5396513 YP_001382751.1 CDS CLB_0392 NC_009697.1 397466 398476 R hypothetical protein complement(397466..398476) Clostridium botulinum A str. ATCC 19397 5395502 YP_001382752.1 CDS CLB_0393 NC_009697.1 398580 399107 D identified by match to protein family HMM PF01569; PAP2 family protein 398580..399107 Clostridium botulinum A str. ATCC 19397 5398039 YP_001382753.1 CDS CLB_0394 NC_009697.1 399518 400330 D identified by match to protein family HMM PF01522; polysaccharide deacetylase 399518..400330 Clostridium botulinum A str. ATCC 19397 5396831 YP_001382754.1 CDS CLB_0395 NC_009697.1 400438 401124 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 400438..401124 Clostridium botulinum A str. ATCC 19397 5397525 YP_001382755.1 CDS CLB_0396 NC_009697.1 401134 402528 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 401134..402528 Clostridium botulinum A str. ATCC 19397 5396533 YP_001382756.1 CDS CLB_0397 NC_009697.1 402591 404081 D lipoprotein 402591..404081 Clostridium botulinum A str. ATCC 19397 5396520 YP_001382757.1 CDS CLB_0398 NC_009697.1 404125 404691 D identified by match to protein family HMM PF06962; hypothetical protein 404125..404691 Clostridium botulinum A str. ATCC 19397 5394729 YP_001382758.1 CDS CLB_0399 NC_009697.1 404717 405391 D identified by match to protein family HMM PF09335; DedA family protein 404717..405391 Clostridium botulinum A str. ATCC 19397 5396232 YP_001382759.1 CDS CLB_0400 NC_009697.1 405532 408210 R identified by match to protein family HMM PF00563; match to protein family HMM PF00672; match to protein family HMM PF00990; match to protein family HMM PF05228; match to protein family HMM TIGR00254; diguanylate cyclase complement(405532..408210) Clostridium botulinum A str. ATCC 19397 5395789 YP_001382760.1 CDS CLB_0401 NC_009697.1 408410 409597 R hypothetical protein complement(408410..409597) Clostridium botulinum A str. ATCC 19397 5395523 YP_001382761.1 CDS CLB_0402 NC_009697.1 409850 411190 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 409850..411190 Clostridium botulinum A str. ATCC 19397 5394687 YP_001382762.1 CDS CLB_0403 NC_009697.1 411382 411948 D identified by match to protein family HMM PF01966; HD domain-containing protein 411382..411948 Clostridium botulinum A str. ATCC 19397 5396330 YP_001382763.1 CDS CLB_0404 NC_009697.1 412260 413528 D identified by match to protein family HMM PF00999; monovalent cation:proton antiporter-2 (CPA2) family protein 412260..413528 Clostridium botulinum A str. ATCC 19397 5397859 YP_001382764.1 CDS CLB_0405 NC_009697.1 413663 414985 R identified by match to protein family HMM PF00266; class V aminotransferase complement(413663..414985) Clostridium botulinum A str. ATCC 19397 5398057 YP_001382765.1 CDS CLB_0406 NC_009697.1 415372 416382 D identified by match to protein family HMM PF03601; hypothetical protein 415372..416382 Clostridium botulinum A str. ATCC 19397 5396593 YP_001382766.1 CDS CLB_0407 NC_009697.1 416513 417187 D hypothetical protein 416513..417187 Clostridium botulinum A str. ATCC 19397 5397559 YP_001382767.1 CDS CLB_0408 NC_009697.1 417133 417831 D identified by match to protein family HMM PF00486; DNA-binding response regulator 417133..417831 Clostridium botulinum A str. ATCC 19397 5397848 YP_001382768.1 CDS CLB_0409 NC_009697.1 417821 419335 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 417821..419335 Clostridium botulinum A str. ATCC 19397 5397411 YP_001382769.1 CDS CLB_0410 NC_009697.1 419443 420858 D identified by match to protein family HMM PF00474; sodium:solute symporter family protein 419443..420858 Clostridium botulinum A str. ATCC 19397 5397871 YP_001382770.1 CDS CLB_0411 NC_009697.1 422088 423407 D identified by match to protein family HMM PF00037; match to protein family HMM PF01512; match to protein family HMM TIGR01945; RnfABCDGE type electron transport complex subunit C 422088..423407 Clostridium botulinum A str. ATCC 19397 5394949 YP_001382771.1 CDS CLB_0412 NC_009697.1 423430 424362 D identified by match to protein family HMM PF03116; match to protein family HMM TIGR01946; RnfABCDGE type electron transport complex subunit D 423430..424362 Clostridium botulinum A str. ATCC 19397 5398096 YP_001382772.1 CDS CLB_0413 NC_009697.1 424362 425033 D identified by match to protein family HMM PF04205; match to protein family HMM TIGR01947; RnfABCDGE type electron transport complex subunit G 424362..425033 Clostridium botulinum A str. ATCC 19397 5396088 YP_001382773.1 CDS CLB_0414 NC_009697.1 425044 425646 D in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex protein RsxE 425044..425646 Clostridium botulinum A str. ATCC 19397 5397037 YP_001382774.1 CDS CLB_0415 NC_009697.1 425697 426275 D identified by match to protein family HMM PF02508; match to protein family HMM TIGR01943; RnfABCDGE type electron transport complex subunit A 425697..426275 Clostridium botulinum A str. ATCC 19397 5397886 YP_001382775.1 CDS CLB_0416 NC_009697.1 426289 427122 D involved in the electron transport chain; in Methanosarcina acetivorans this protein is part of a cluster involved in electron transfer during growth on acetate; ferredoxin 426289..427122 Clostridium botulinum A str. ATCC 19397 5396083 YP_001382776.1 CDS CLB_0417 NC_009697.1 427502 428590 D identified by match to protein family HMM PF04122; amidase 427502..428590 Clostridium botulinum A str. ATCC 19397 5395200 YP_001382777.1 CDS CLB_0418 NC_009697.1 428763 429299 R identified by match to protein family HMM PF07456; hypothetical protein complement(428763..429299) Clostridium botulinum A str. ATCC 19397 5396850 YP_001382778.1 CDS CLB_0419 NC_009697.1 429317 429709 R identified by match to protein family HMM PF07009; hypothetical protein complement(429317..429709) Clostridium botulinum A str. ATCC 19397 5396630 YP_001382779.1 CDS CLB_0420 NC_009697.1 429824 430858 R identified by match to protein family HMM PF02424; apbE family protein complement(429824..430858) Clostridium botulinum A str. ATCC 19397 5395037 YP_001382780.1 CDS CLB_0421 NC_009697.1 431706 433760 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein complement(431706..433760) Clostridium botulinum A str. ATCC 19397 5397256 YP_001382781.1 CDS CLB_0422 NC_009697.1 434437 436167 R identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM PF07728; match to protein family HMM TIGR01241; ATP-dependent metalloprotease complement(434437..436167) Clostridium botulinum A str. ATCC 19397 5395848 YP_001382782.1 CDS CLB_0423 NC_009697.1 436387 437442 D identified by match to protein family HMM PF06803; hypothetical protein 436387..437442 Clostridium botulinum A str. ATCC 19397 5396823 YP_001382783.1 CDS rnhA NC_009697.1 437417 437866 D An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 437417..437866 Clostridium botulinum A str. ATCC 19397 5395779 YP_001382784.1 CDS CLB_0425 NC_009697.1 437929 438105 D identified by Glimmer3; hypothetical protein 437929..438105 Clostridium botulinum A str. ATCC 19397 5396841 YP_001382785.1 CDS CLB_0426 NC_009697.1 438286 439590 D identified by match to protein family HMM PF00515; match to protein family HMM PF01381; TPR repeat-containing DNA binding protein 438286..439590 Clostridium botulinum A str. ATCC 19397 5397881 YP_001382786.1 CDS CLB_0427 NC_009697.1 439622 440875 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 439622..440875 Clostridium botulinum A str. ATCC 19397 5396661 YP_001382787.1 CDS CLB_0428 NC_009697.1 441189 441326 D identified by Glimmer3; hypothetical protein 441189..441326 Clostridium botulinum A str. ATCC 19397 5395788 YP_001382788.1 CDS CLB_0429 NC_009697.1 441356 442327 D identified by similarity to GB:AAP09991.1; hypothetical protein 441356..442327 Clostridium botulinum A str. ATCC 19397 5396855 YP_001382789.1 CDS CLB_0430 NC_009697.1 442487 442666 D identified by Glimmer3; hypothetical protein 442487..442666 Clostridium botulinum A str. ATCC 19397 5395269 YP_001382790.1 CDS CLB_0431 NC_009697.1 442697 443302 D identified by match to protein family HMM PF01965; DJ-1/PfpI family protein 442697..443302 Clostridium botulinum A str. ATCC 19397 5394956 YP_001382791.1 CDS CLB_0432 NC_009697.1 443414 443797 R identified by Glimmer3; hypothetical protein complement(443414..443797) Clostridium botulinum A str. ATCC 19397 5397293 YP_001382792.1 CDS CLB_0433 NC_009697.1 443832 444437 D hypothetical protein 443832..444437 Clostridium botulinum A str. ATCC 19397 5397645 YP_001382793.1 CDS clpB NC_009697.1 444801 447401 D identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03346; clpB protein 444801..447401 Clostridium botulinum A str. ATCC 19397 5395959 YP_001382794.1 CDS CLB_0435 NC_009697.1 447747 448475 R identified by match to protein family HMM PF07685; CobB/CobQ family glutamine amidotransferase complement(447747..448475) Clostridium botulinum A str. ATCC 19397 5397027 YP_001382795.1 CDS CLB_0436 NC_009697.1 448533 449894 R identified by match to protein family HMM PF08245; match to protein family HMM PF08353; UDP-N-acetylmuramyl tripeptide synthetase-like protein complement(448533..449894) Clostridium botulinum A str. ATCC 19397 5397459 YP_001382796.1 CDS manA NC_009697.1 450159 451139 D identified by match to protein family HMM PF01238; mannose-6-phosphate isomerase 450159..451139 Clostridium botulinum A str. ATCC 19397 5396115 YP_001382797.1 CDS CLB_0438 NC_009697.1 451488 452603 D lipoprotein 451488..452603 Clostridium botulinum A str. ATCC 19397 5395419 YP_001382798.1 CDS CLB_0439 NC_009697.1 452711 453565 D phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters UDP disphosphate which reduces the pool of lipid carrier available to the cell; UDP pyrophosphate phosphatase 452711..453565 Clostridium botulinum A str. ATCC 19397 5395800 YP_001382799.1 CDS CLB_0448 NC_009697.1 459298 460161 R identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein complement(459298..460161) Clostridium botulinum A str. ATCC 19397 5396941 YP_001382800.1 CDS CLB_0449 NC_009697.1 460298 461020 D identified by match to protein family HMM PF01553; match to protein family HMM TIGR00530; 1-acyl-sn-glycerol-3-phosphate acyltransferase 460298..461020 Clostridium botulinum A str. ATCC 19397 5396524 YP_001382801.1 CDS CLB_0450 NC_009697.1 461765 463126 D identified by match to protein family HMM PF00682; HMGL-related enzyme 461765..463126 Clostridium botulinum A str. ATCC 19397 5396665 YP_001382802.1 CDS CLB_0451 NC_009697.1 463270 465195 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 463270..465195 Clostridium botulinum A str. ATCC 19397 5396797 YP_001382803.1 CDS CLB_0452 NC_009697.1 465231 466229 D identified by match to protein family HMM PF00180; isocitrate/isopropylmalate family dehydrogenase 465231..466229 Clostridium botulinum A str. ATCC 19397 5394572 YP_001382804.1 CDS CLB_0453 NC_009697.1 466481 467263 D identified by match to protein family HMM PF00005; polar amino acid ABC transporter ATP-binding protein 466481..467263 Clostridium botulinum A str. ATCC 19397 5397814 YP_001382805.1 CDS CLB_0454 NC_009697.1 467782 469548 D identified by match to protein family HMM PF03553; match to protein family HMM PF03606; Na+/H+ antiporter family protein 467782..469548 Clostridium botulinum A str. ATCC 19397 5395690 YP_001382806.1 CDS CLB_0455 NC_009697.1 469575 469790 R identified by match to protein family HMM PF04070; hypothetical protein complement(469575..469790) Clostridium botulinum A str. ATCC 19397 5397618 YP_001382807.1 CDS panD NC_009697.1 469878 470261 R Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase complement(469878..470261) Clostridium botulinum A str. ATCC 19397 5396385 YP_001382808.1 CDS panC NC_009697.1 470410 471255 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(470410..471255) Clostridium botulinum A str. ATCC 19397 5398079 YP_001382809.1 CDS panB NC_009697.1 471310 472137 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(471310..472137) Clostridium botulinum A str. ATCC 19397 5394821 YP_001382810.1 CDS addB NC_009697.1 472938 476381 D identified by match to protein family HMM TIGR02773; ATP-dependent nuclease subunit B 472938..476381 Clostridium botulinum A str. ATCC 19397 5395433 YP_001382811.1 CDS CLB_0460 NC_009697.1 476670 477884 R ABC transporter permease complement(476670..477884) Clostridium botulinum A str. ATCC 19397 5395762 YP_001382812.1 CDS CLB_0461 NC_009697.1 477874 478590 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(477874..478590) Clostridium botulinum A str. ATCC 19397 5398205 YP_001382813.1 CDS CLB_0462 NC_009697.1 478623 479573 R identified by similarity to GB:AAS44016.1; hypothetical protein complement(478623..479573) Clostridium botulinum A str. ATCC 19397 5396690 YP_001382814.1 CDS CLB_0463 NC_009697.1 479581 479901 R PadR family transcriptional regulator complement(479581..479901) Clostridium botulinum A str. ATCC 19397 5397794 YP_001382815.1 CDS CLB_0464 NC_009697.1 480242 482410 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 480242..482410 Clostridium botulinum A str. ATCC 19397 5395167 YP_001382816.1 CDS CLB_0465 NC_009697.1 482425 482718 D identified by Glimmer3; hypothetical protein 482425..482718 Clostridium botulinum A str. ATCC 19397 5394791 YP_001382817.1 CDS CLB_0466 NC_009697.1 482844 483026 D identified by Glimmer3; hypothetical protein 482844..483026 Clostridium botulinum A str. ATCC 19397 5395248 YP_001382818.1 CDS CLB_0467 NC_009697.1 483118 483297 D identified by Glimmer3; hypothetical protein 483118..483297 Clostridium botulinum A str. ATCC 19397 5395567 YP_001382819.1 CDS CLB_0468 NC_009697.1 483510 485252 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; multidrug export ATP-binding protein/permease 483510..485252 Clostridium botulinum A str. ATCC 19397 5394813 YP_001382820.1 CDS CLB_0469 NC_009697.1 485431 485817 R identified by Glimmer3; hypothetical protein complement(485431..485817) Clostridium botulinum A str. ATCC 19397 5396181 YP_001382821.1 CDS CLB_0470 NC_009697.1 486124 486774 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 486124..486774 Clostridium botulinum A str. ATCC 19397 5398147 YP_001382822.1 CDS CLB_0471 NC_009697.1 486777 487463 D hypothetical protein 486777..487463 Clostridium botulinum A str. ATCC 19397 5397435 YP_001382823.1 CDS CLB_0472 NC_009697.1 487712 488320 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(487712..488320) Clostridium botulinum A str. ATCC 19397 5395457 YP_001382824.1 CDS hypB-1 NC_009697.1 488565 489236 D identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073; hydrogenase nickel incorporation protein HypB 488565..489236 Clostridium botulinum A str. ATCC 19397 5396556 YP_001382825.1 CDS CLB_0474 NC_009697.1 489472 492150 D identified by match to protein family HMM PF00037; match to protein family HMM PF00070; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase family protein 489472..492150 Clostridium botulinum A str. ATCC 19397 5397506 YP_001382826.1 CDS hypA-1 NC_009697.1 492206 492547 D identified by match to protein family HMM PF01155; hydrogenase nickel incorporation protein HypA 492206..492547 Clostridium botulinum A str. ATCC 19397 5396921 YP_001382827.1 CDS CLB_0476 NC_009697.1 492586 493572 D hypothetical protein 492586..493572 Clostridium botulinum A str. ATCC 19397 5396066 YP_001382828.1 CDS CLB_0477 NC_009697.1 493746 494234 R identified by Glimmer3; hypothetical protein complement(493746..494234) Clostridium botulinum A str. ATCC 19397 5397440 YP_001382829.1 CDS addA NC_009697.1 494605 498444 D identified by match to protein family HMM PF00580; match to protein family HMM TIGR02785; recombination helicase AddA 494605..498444 Clostridium botulinum A str. ATCC 19397 5394783 YP_001382830.1 CDS CLB_0479 NC_009697.1 498584 500275 D identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 498584..500275 Clostridium botulinum A str. ATCC 19397 5394603 YP_001382831.1 CDS pepT NC_009697.1 500352 501578 D catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 500352..501578 Clostridium botulinum A str. ATCC 19397 5396712 YP_001382832.1 CDS CLB_0481 NC_009697.1 501853 502785 R identified by match to protein family HMM PF01734; phospholipase family protein complement(501853..502785) Clostridium botulinum A str. ATCC 19397 5397705 YP_001382833.1 CDS CLB_0482 NC_009697.1 503357 504073 D identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 503357..504073 Clostridium botulinum A str. ATCC 19397 5395984 YP_001382834.1 CDS CLB_0483 NC_009697.1 504279 504752 D identified by match to protein family HMM PF00903; glyoxalase family protein 504279..504752 Clostridium botulinum A str. ATCC 19397 5396455 YP_001382835.1 CDS CLB_0484 NC_009697.1 504712 504849 D identified by Glimmer3; hypothetical protein 504712..504849 Clostridium botulinum A str. ATCC 19397 5396886 YP_001382836.1 CDS CLB_0485 NC_009697.1 505153 506574 D identified by match to protein family HMM PF04122; N-acetylmuramoyl-L-alanine amidase-like protein 505153..506574 Clostridium botulinum A str. ATCC 19397 5395030 YP_001382837.1 CDS CLB_0486 NC_009697.1 506782 507417 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease complement(506782..507417) Clostridium botulinum A str. ATCC 19397 5395035 YP_001382838.1 CDS CLB_0487 NC_009697.1 507430 508233 R identified by match to protein family HMM PF00497; polar amino acid ABC transporter amino acid-binding protein complement(507430..508233) Clostridium botulinum A str. ATCC 19397 5394688 YP_001382839.1 CDS CLB_0488 NC_009697.1 508454 509182 D identified by match to protein family HMM PF08241; match to protein family HMM PF08242; hypothetical protein 508454..509182 Clostridium botulinum A str. ATCC 19397 5396646 YP_001382840.1 CDS CLB_0489 NC_009697.1 509531 510742 R identified by match to protein family HMM PF00563; match to protein family HMM PF08668; EAL domain-containing protein complement(509531..510742) Clostridium botulinum A str. ATCC 19397 5395362 YP_001382841.1 CDS thiE NC_009697.1 511008 511625 R Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase complement(511008..511625) Clostridium botulinum A str. ATCC 19397 5394837 YP_001382842.1 CDS thiM-1 NC_009697.1 511616 512407 R identified by match to protein family HMM PF02110; match to protein family HMM TIGR00694; hydroxyethylthiazole kinase complement(511616..512407) Clostridium botulinum A str. ATCC 19397 5395930 YP_001382843.1 CDS thiD-1 NC_009697.1 512639 513439 R identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase complement(512639..513439) Clostridium botulinum A str. ATCC 19397 5395307 YP_001382844.1 CDS ddl NC_009697.1 514451 515353 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 514451..515353 Clostridium botulinum A str. ATCC 19397 5397009 YP_001382845.1 CDS CLB_0494 NC_009697.1 515509 516651 D identified by match to protein family HMM PF01094; high-affinity branched-chain amino acid ABC transporter amino acid-binding protein 515509..516651 Clostridium botulinum A str. ATCC 19397 5395979 YP_001382846.1 CDS CLB_0495 NC_009697.1 516655 517527 D identified by match to protein family HMM PF02653; high-affinity branched-chain amino acid ABC transporter permease 516655..517527 Clostridium botulinum A str. ATCC 19397 5395769 YP_001382847.1 CDS CLB_0496 NC_009697.1 517528 518472 D identified by match to protein family HMM PF02653; high-affinity branched-chain amino acid ABC transporter permease 517528..518472 Clostridium botulinum A str. ATCC 19397 5395048 YP_001382848.1 CDS CLB_0497 NC_009697.1 518484 519221 D identified by match to protein family HMM PF00005; high-affinity branched chain amino acid ABC transporter ATP-binding protein 518484..519221 Clostridium botulinum A str. ATCC 19397 5397892 YP_001382849.1 CDS CLB_0498 NC_009697.1 519223 519924 D identified by match to protein family HMM PF00005; high-affinity branched chain amino acid ABC transporter ATP-binding protein 519223..519924 Clostridium botulinum A str. ATCC 19397 5398181 YP_001382850.1 CDS CLB_0499 NC_009697.1 519953 520729 D identified by match to protein family HMM PF02596; hypothetical protein 519953..520729 Clostridium botulinum A str. ATCC 19397 5397587 YP_001382851.1 CDS CLB_0500 NC_009697.1 521131 521889 D identified by match to protein family HMM PF06738; hypothetical protein 521131..521889 Clostridium botulinum A str. ATCC 19397 5397604 YP_001382852.1 CDS CLB_0501 NC_009697.1 521886 522326 D hypothetical protein 521886..522326 Clostridium botulinum A str. ATCC 19397 5395987 YP_001382853.1 CDS CLB_0502 NC_009697.1 522468 523919 D identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator 522468..523919 Clostridium botulinum A str. ATCC 19397 5397054 YP_001382854.1 CDS CLB_0503 NC_009697.1 523980 524549 D identified by match to protein family HMM PF04011; hypothetical protein 523980..524549 Clostridium botulinum A str. ATCC 19397 5394927 YP_001382855.1 CDS CLB_0504 NC_009697.1 524559 525395 D identified by match to protein family HMM PF04536; lipoprotein 524559..525395 Clostridium botulinum A str. ATCC 19397 5396410 YP_001382856.1 CDS CLB_0505 NC_009697.1 525914 526774 D identified by match to protein family HMM PF04536; hypothetical protein 525914..526774 Clostridium botulinum A str. ATCC 19397 5394869 YP_001382857.1 CDS CLB_0506 NC_009697.1 527048 527941 D identified by match to protein family HMM PF00293; NUDIX family hydrolase 527048..527941 Clostridium botulinum A str. ATCC 19397 5396415 YP_001382858.1 CDS CLB_0507 NC_009697.1 528075 528557 D identified by Glimmer3; hypothetical protein 528075..528557 Clostridium botulinum A str. ATCC 19397 5394581 YP_001382859.1 CDS CLB_0508 NC_009697.1 528733 529257 D hypothetical protein 528733..529257 Clostridium botulinum A str. ATCC 19397 5396935 YP_001382860.1 CDS CLB_0509 NC_009697.1 529259 529849 D identified by match to protein family HMM PF08241; match to protein family HMM PF08242; methlytransferase-like protein 529259..529849 Clostridium botulinum A str. ATCC 19397 5398224 YP_001382861.1 CDS CLB_0510 NC_009697.1 529935 530174 R hypothetical protein complement(529935..530174) Clostridium botulinum A str. ATCC 19397 5395947 YP_001382862.1 CDS CLB_0511 NC_009697.1 530195 530677 R hypothetical protein complement(530195..530677) Clostridium botulinum A str. ATCC 19397 5395675 YP_001382863.1 CDS CLB_0512 NC_009697.1 530912 531046 D identified by Glimmer3; hypothetical protein 530912..531046 Clostridium botulinum A str. ATCC 19397 5398169 YP_001382864.1 CDS CLB_0513 NC_009697.1 531423 532652 D identified by match to protein family HMM PF00149; match to protein family HMM TIGR00619; nuclease SbcCD subunit D 531423..532652 Clostridium botulinum A str. ATCC 19397 5394534 YP_001382865.1 CDS sbcC NC_009697.1 532627 536157 D exonuclease SbcC 532627..536157 Clostridium botulinum A str. ATCC 19397 5398067 YP_001382866.1 CDS CLB_0515 NC_009697.1 536185 536733 D identified by match to protein family HMM PF00293; NUDIX family hydrolase 536185..536733 Clostridium botulinum A str. ATCC 19397 5395749 YP_001382867.1 CDS CLB_0516 NC_009697.1 537544 538395 D identified by match to protein family HMM PF02588; hypothetical protein 537544..538395 Clostridium botulinum A str. ATCC 19397 5397080 YP_001382868.1 CDS CLB_0517 NC_009697.1 538860 539225 D identified by match to protein family HMM PF01022; cadmium resistance transcriptional regulator CadC 538860..539225 Clostridium botulinum A str. ATCC 19397 5396278 YP_001382869.1 CDS cadA NC_009697.1 539301 541529 D identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525; cadmium-translocating P-type ATPase 539301..541529 Clostridium botulinum A str. ATCC 19397 5395047 YP_001382870.1 CDS CLB_0520 NC_009697.1 542177 542386 D identified by Glimmer3; hypothetical protein 542177..542386 Clostridium botulinum A str. ATCC 19397 5395462 YP_001382871.1 CDS CLB_0521 NC_009697.1 543267 543614 D hypothetical protein 543267..543614 Clostridium botulinum A str. ATCC 19397 5396589 YP_001382872.1 CDS CLB_0522 NC_009697.1 543633 543782 R hypothetical protein complement(543633..543782) Clostridium botulinum A str. ATCC 19397 5395757 YP_001382873.1 CDS CLB_0523 NC_009697.1 544300 545109 D hypothetical protein 544300..545109 Clostridium botulinum A str. ATCC 19397 5395096 YP_001382874.1 CDS CLB_0524 NC_009697.1 546066 547442 D identified by match to protein family HMM PF02562; PhoH family protein 546066..547442 Clostridium botulinum A str. ATCC 19397 5396054 YP_001382875.1 CDS CLB_0525 NC_009697.1 547710 548714 D hypothetical protein 547710..548714 Clostridium botulinum A str. ATCC 19397 5397442 YP_001382876.1 CDS CLB_0526 NC_009697.1 548724 549740 D hypothetical protein 548724..549740 Clostridium botulinum A str. ATCC 19397 5397752 YP_001382877.1 CDS CLB_0527 NC_009697.1 550060 550233 D identified by Glimmer3; hypothetical protein 550060..550233 Clostridium botulinum A str. ATCC 19397 5397946 YP_001382878.1 CDS sagB NC_009697.1 550398 551354 D streptolysin associated protein SagB 550398..551354 Clostridium botulinum A str. ATCC 19397 5395912 YP_001382879.1 CDS sagC NC_009697.1 551358 552440 D streptolysin associated protein SagC 551358..552440 Clostridium botulinum A str. ATCC 19397 5395120 YP_001382880.1 CDS sagD NC_009697.1 552456 553814 D identified by match to protein family HMM PF02624; streptolysin associated protein SagD 552456..553814 Clostridium botulinum A str. ATCC 19397 5395548 YP_001382881.1 CDS CLB_0531 NC_009697.1 553789 554427 D identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein 553789..554427 Clostridium botulinum A str. ATCC 19397 5397072 YP_001382882.1 CDS CLB_0532 NC_009697.1 554435 555163 D hypothetical protein 554435..555163 Clostridium botulinum A str. ATCC 19397 5395816 YP_001382883.1 CDS sagG NC_009697.1 555472 556404 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein SagG 555472..556404 Clostridium botulinum A str. ATCC 19397 5397019 YP_001382884.1 CDS sagH NC_009697.1 556416 557540 D identified by match to protein family HMM PF01061; ABC transporter ATP-binding protein/permease SagH 556416..557540 Clostridium botulinum A str. ATCC 19397 5397855 YP_001382885.1 CDS sagI NC_009697.1 557542 558684 D identified by match to protein family HMM PF01061; drug ABC transporter ATP-binding protein/permease 557542..558684 Clostridium botulinum A str. ATCC 19397 5396165 YP_001382886.1 CDS CLB_0536 NC_009697.1 558812 559462 D identified by match to protein family HMM PF02163; metalloprotease 558812..559462 Clostridium botulinum A str. ATCC 19397 5397170 YP_001382887.1 CDS CLB_0537 NC_009697.1 559930 560400 R identified by Glimmer3; hypothetical protein complement(559930..560400) Clostridium botulinum A str. ATCC 19397 5397560 YP_001382888.1 CDS CLB_0538 NC_009697.1 560518 561780 R identified by match to protein family HMM PF00939; match to protein family HMM PF02040; match to protein family HMM PF03600; arsenical pump family protein complement(560518..561780) Clostridium botulinum A str. ATCC 19397 5396093 YP_001382889.1 CDS CLB_0539 NC_009697.1 561907 563271 R hypothetical protein complement(561907..563271) Clostridium botulinum A str. ATCC 19397 5397373 YP_001382890.1 CDS trmB NC_009697.1 563547 564200 D tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 563547..564200 Clostridium botulinum A str. ATCC 19397 5395158 YP_001382891.1 CDS CLB_0541 NC_009697.1 564413 564676 D hypothetical protein 564413..564676 Clostridium botulinum A str. ATCC 19397 5398109 YP_001382892.1 CDS tpx NC_009697.1 564771 565265 R antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase complement(564771..565265) Clostridium botulinum A str. ATCC 19397 5395305 YP_001382893.1 CDS fabG NC_009697.1 565636 566379 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 565636..566379 Clostridium botulinum A str. ATCC 19397 5397360 YP_001382894.1 CDS CLB_0544 NC_009697.1 566442 567395 D identified by match to protein family HMM PF00072; response regulator 566442..567395 Clostridium botulinum A str. ATCC 19397 5398151 YP_001382895.1 CDS CLB_0545 NC_009697.1 567519 569675 R identified by match to protein family HMM PF00877; match to protein family HMM PF05257; match to protein family HMM PF06347; match to protein family HMM PF08239; NlpC/P60 family protein complement(567519..569675) Clostridium botulinum A str. ATCC 19397 5397383 YP_001382896.1 CDS CLB_0546 NC_009697.1 569983 570927 D identified by match to protein family HMM PF00561; alpha/beta hydrolase 569983..570927 Clostridium botulinum A str. ATCC 19397 5394585 YP_001382897.1 CDS CLB_0547 NC_009697.1 571190 572437 D identified by match to protein family HMM PF00072; response regulator 571190..572437 Clostridium botulinum A str. ATCC 19397 5396180 YP_001382898.1 CDS CLB_0548 NC_009697.1 572734 573318 D identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; HDIG domain-containing protein 572734..573318 Clostridium botulinum A str. ATCC 19397 5398065 YP_001382899.1 CDS CLB_0549 NC_009697.1 573354 575378 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein 573354..575378 Clostridium botulinum A str. ATCC 19397 5397569 YP_001382900.1 CDS CLB_0550 NC_009697.1 575583 576377 D identified by match to protein family HMM PF00072; response regulator 575583..576377 Clostridium botulinum A str. ATCC 19397 5396016 YP_001382901.1 CDS serS-2 NC_009697.1 576859 578136 D identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414; seryl-tRNA synthetase 576859..578136 Clostridium botulinum A str. ATCC 19397 5396250 YP_001382902.1 CDS CLB_0552 NC_009697.1 578714 581068 D identified by match to protein family HMM PF06733; ATP-dependent helicase 578714..581068 Clostridium botulinum A str. ATCC 19397 5395032 YP_001382903.1 CDS CLB_0553 NC_009697.1 581359 581550 R hypothetical protein complement(581359..581550) Clostridium botulinum A str. ATCC 19397 5397687 YP_001382904.1 CDS CLB_0554 NC_009697.1 581880 582500 R identified by match to protein family HMM PF00392; match to protein family HMM PF02080; match to protein family HMM PF08279; GntR family transcriptional regulator complement(581880..582500) Clostridium botulinum A str. ATCC 19397 5396206 YP_001382905.1 CDS ceo NC_009697.1 582755 583708 D identified by match to protein family HMM PF01262; N(5)-(carboxyethyl)ornithine synthase 582755..583708 Clostridium botulinum A str. ATCC 19397 5396694 YP_001382906.1 CDS CLB_0556 NC_009697.1 583912 585918 R identified by match to protein family HMM PF06874; fructose-1,6-bisphosphatase complement(583912..585918) Clostridium botulinum A str. ATCC 19397 5395070 YP_001382907.1 CDS CLB_0557 NC_009697.1 586202 586564 D identified by Glimmer3; hypothetical protein 586202..586564 Clostridium botulinum A str. ATCC 19397 5394831 YP_001382908.1 CDS CLB_0558 NC_009697.1 586739 587152 D identified by match to protein family HMM PF01814; match to protein family HMM TIGR02481; hemerythrin-like metal-binding domain-containing protein 586739..587152 Clostridium botulinum A str. ATCC 19397 5396077 YP_001382909.1 CDS CLB_0559 NC_009697.1 587366 588061 R identified by Glimmer3; hypothetical protein complement(587366..588061) Clostridium botulinum A str. ATCC 19397 5396966 YP_001382910.1 CDS CLB_0560 NC_009697.1 588800 589222 D identified by Glimmer3; hypothetical protein 588800..589222 Clostridium botulinum A str. ATCC 19397 5398037 YP_001382911.1 CDS CLB_0561 NC_009697.1 589498 590148 R identified by match to protein family HMM PF02777; Fe/Mn family superoxide dismutase complement(589498..590148) Clostridium botulinum A str. ATCC 19397 5395428 YP_001382912.1 CDS CLB_0562 NC_009697.1 590341 591180 D identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 590341..591180 Clostridium botulinum A str. ATCC 19397 5397727 YP_001382913.1 CDS CLB_0563 NC_009697.1 591278 591577 R hypothetical protein complement(591278..591577) Clostridium botulinum A str. ATCC 19397 5396538 YP_001382914.1 CDS CLB_0564 NC_009697.1 591725 593578 R hypothetical protein complement(591725..593578) Clostridium botulinum A str. ATCC 19397 5398225 YP_001382915.1 CDS CLB_0565 NC_009697.1 593850 593972 D identified by Glimmer3; hypothetical protein 593850..593972 Clostridium botulinum A str. ATCC 19397 5396384 YP_001382916.1 CDS CLB_0566 NC_009697.1 594773 595237 R identified by match to protein family HMM PF01037; AsnC family transcriptional regulator complement(594773..595237) Clostridium botulinum A str. ATCC 19397 5394579 YP_001382917.1 CDS CLB_0567 NC_009697.1 595762 596136 D hypothetical protein 595762..596136 Clostridium botulinum A str. ATCC 19397 5396800 YP_001382918.1 CDS CLB_0568 NC_009697.1 596760 598133 D identified by match to protein family HMM PF00324; match to protein family HMM PF03845; amino acid permease 596760..598133 Clostridium botulinum A str. ATCC 19397 5396175 YP_001382919.1 CDS CLB_0569 NC_009697.1 598571 599920 D identified by match to protein family HMM PF00324; match to protein family HMM PF03845; amino acid permease 598571..599920 Clostridium botulinum A str. ATCC 19397 5395923 YP_001382920.1 CDS CLB_0570 NC_009697.1 600272 600781 D identified by match to protein family HMM PF00132; hexapeptide repeat-containing transferase 600272..600781 Clostridium botulinum A str. ATCC 19397 5398217 YP_001382921.1 CDS CLB_0571 NC_009697.1 600826 601698 D identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 600826..601698 Clostridium botulinum A str. ATCC 19397 5395458 YP_001382922.1 CDS CLB_0572 NC_009697.1 602019 604637 R identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01517; ATPase P complement(602019..604637) Clostridium botulinum A str. ATCC 19397 5397068 YP_001382923.1 CDS CLB_0573 NC_009697.1 604931 605467 R identified by match to protein family HMM PF02417; chromate transporter protein complement(604931..605467) Clostridium botulinum A str. ATCC 19397 5397735 YP_001382924.1 CDS CLB_0574 NC_009697.1 605467 606003 R identified by match to protein family HMM PF02417; chromate transport protein complement(605467..606003) Clostridium botulinum A str. ATCC 19397 5398160 YP_001382925.1 CDS CLB_0575 NC_009697.1 606177 606767 D identified by match to protein family HMM PF02452; PemK family protein 606177..606767 Clostridium botulinum A str. ATCC 19397 5396856 YP_001382926.1 CDS CLB_0576 NC_009697.1 607214 607639 D identified by match to protein family HMM PF03885; hypothetical protein 607214..607639 Clostridium botulinum A str. ATCC 19397 5397601 YP_001382927.1 CDS nadE NC_009697.1 607845 609761 R catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(607845..609761) Clostridium botulinum A str. ATCC 19397 5398168 YP_001382928.1 CDS CLB_0578 NC_009697.1 609983 610423 D identified by match to protein family HMM PF01957; hypothetical protein 609983..610423 Clostridium botulinum A str. ATCC 19397 5396907 YP_001382929.1 CDS CLB_0579 NC_009697.1 610426 611421 D identified by match to protein family HMM PF01145; hypothetical protein 610426..611421 Clostridium botulinum A str. ATCC 19397 5397253 YP_001382930.1 CDS CLB_0580 NC_009697.1 611784 612593 D identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein 611784..612593 Clostridium botulinum A str. ATCC 19397 5398139 YP_001382931.1 CDS pepP NC_009697.1 612813 614048 D identified by match to protein family HMM PF00557; match to protein family HMM PF05195; xaa-pro aminopeptidase 612813..614048 Clostridium botulinum A str. ATCC 19397 5395134 YP_001382932.1 CDS CLB_0582 NC_009697.1 614701 615150 R hypothetical protein complement(614701..615150) Clostridium botulinum A str. ATCC 19397 5395820 YP_001382933.1 CDS CLB_0583 NC_009697.1 615568 615759 R identified by match to protein family HMM PF01381; DNA-binding protein complement(615568..615759) Clostridium botulinum A str. ATCC 19397 5394818 YP_001382934.1 CDS CLB_0584 NC_009697.1 615737 616198 R identified by match to protein family HMM PF00583; acetyltransferase complement(615737..616198) Clostridium botulinum A str. ATCC 19397 5394917 YP_001382935.1 CDS CLB_0585 NC_009697.1 616582 616794 D identified by match to protein family HMM PF04324; 2Fe-2S-binding domain-containing protein 616582..616794 Clostridium botulinum A str. ATCC 19397 5394618 YP_001382936.1 CDS CLB_0586 NC_009697.1 617266 617403 D identified by Glimmer3; hypothetical protein 617266..617403 Clostridium botulinum A str. ATCC 19397 5396078 YP_001382937.1 CDS CLB_0587 NC_009697.1 617585 617692 D identified by Glimmer3; hypothetical protein 617585..617692 Clostridium botulinum A str. ATCC 19397 5397142 YP_001382938.1 CDS CLB_0588 NC_009697.1 617758 618666 D hypothetical protein 617758..618666 Clostridium botulinum A str. ATCC 19397 5396869 YP_001382939.1 CDS CLB_0589 NC_009697.1 618934 619443 D identified by Glimmer3; hypothetical protein 618934..619443 Clostridium botulinum A str. ATCC 19397 5398164 YP_001382940.1 CDS CLB_0590 NC_009697.1 619453 621096 D identified by match to protein family HMM PF02554; carbon starvation protein CstA 619453..621096 Clostridium botulinum A str. ATCC 19397 5397346 YP_001382941.1 CDS CLB_0591 NC_009697.1 621557 622246 D hypothetical protein 621557..622246 Clostridium botulinum A str. ATCC 19397 5396522 YP_001382942.1 CDS CLB_0592 NC_009697.1 623166 625157 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein 623166..625157 Clostridium botulinum A str. ATCC 19397 5397073 YP_001382943.1 CDS mscL NC_009697.1 627634 628035 D identified by match to protein family HMM PF01741; match to protein family HMM TIGR00220; large conductance mechanosensitive channel protein 627634..628035 Clostridium botulinum A str. ATCC 19397 5398085 YP_001382944.1 CDS CLB_0595 NC_009697.1 628401 629084 D identified by match to protein family HMM TIGR02357; proton-coupled thiamine transporter YuaJ 628401..629084 Clostridium botulinum A str. ATCC 19397 5397877 YP_001382945.1 CDS CLB_0596 NC_009697.1 629217 629354 R identified by Glimmer3; hypothetical protein complement(629217..629354) Clostridium botulinum A str. ATCC 19397 5397110 YP_001382946.1 CDS CLB_0597 NC_009697.1 629408 629560 D identified by Glimmer3; hypothetical protein 629408..629560 Clostridium botulinum A str. ATCC 19397 5397994 YP_001382947.1 CDS CLB_0598 NC_009697.1 629608 630744 D identified by match to protein family HMM PF02810; SecC motif-containing protein 629608..630744 Clostridium botulinum A str. ATCC 19397 5397458 YP_001382948.1 CDS CLB_0599 NC_009697.1 631232 631612 D identified by match to protein family HMM PF00392; GntR family transcriptional regulator 631232..631612 Clostridium botulinum A str. ATCC 19397 5397155 YP_001382949.1 CDS CLB_0600 NC_009697.1 631605 632300 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 631605..632300 Clostridium botulinum A str. ATCC 19397 5397545 YP_001382950.1 CDS CLB_0601 NC_009697.1 632300 633061 D ABC transporter permease 632300..633061 Clostridium botulinum A str. ATCC 19397 5396444 YP_001382951.1 CDS potA NC_009697.1 633878 634960 D identified by match to protein family HMM PF00005; match to protein family HMM PF08402; match to protein family HMM TIGR01187; spermidine/putrescine ABC transporter ATP-binding protein 633878..634960 Clostridium botulinum A str. ATCC 19397 5395862 YP_001382952.1 CDS potB NC_009697.1 634960 635919 D identified by match to protein family HMM PF00528; spermidine/putrescine ABC transporter permease PotB 634960..635919 Clostridium botulinum A str. ATCC 19397 5397387 YP_001382953.1 CDS CLB_0604 NC_009697.1 635922 637763 D identified by match to protein family HMM PF00528; match to protein family HMM PF01547; spermidine/putrescine ABC transporter permease/spermidine/putrescine-binding protein 635922..637763 Clostridium botulinum A str. ATCC 19397 5397880 YP_001382954.1 CDS CLB_0605 NC_009697.1 638120 638989 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(638120..638989) Clostridium botulinum A str. ATCC 19397 5396760 YP_001382955.1 CDS CLB_0606 NC_009697.1 639251 640552 D identified by match to protein family HMM PF00375; proton/sodium-glutamate symport protein 639251..640552 Clostridium botulinum A str. ATCC 19397 5397036 YP_001382956.1 CDS CLB_0607 NC_009697.1 641154 641294 D identified by Glimmer3; hypothetical protein 641154..641294 Clostridium botulinum A str. ATCC 19397 5395332 YP_001382957.1 CDS CLB_0608 NC_009697.1 641698 642342 D identified by match to protein family HMM PF01966; HD domain-containing protein 641698..642342 Clostridium botulinum A str. ATCC 19397 5395065 YP_001382958.1 CDS CLB_0609 NC_009697.1 642610 642723 D identified by Glimmer3; hypothetical protein 642610..642723 Clostridium botulinum A str. ATCC 19397 5396400 YP_001382959.1 CDS CLB_0610 NC_009697.1 642807 643037 D identified by Glimmer3; hypothetical protein 642807..643037 Clostridium botulinum A str. ATCC 19397 5397749 YP_001382960.1 CDS CLB_0611 NC_009697.1 643041 644045 D identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein 643041..644045 Clostridium botulinum A str. ATCC 19397 5395105 YP_001382961.1 CDS CLB_0612 NC_009697.1 644359 645207 R identified by match to protein family HMM PF00805; pentapeptide repeat-containing protein complement(644359..645207) Clostridium botulinum A str. ATCC 19397 5394685 YP_001382962.1 CDS CLB_0613 NC_009697.1 645531 645692 R identified by Glimmer3; hypothetical protein complement(645531..645692) Clostridium botulinum A str. ATCC 19397 5396419 YP_003264524.1 CDS CLB_0614 NC_009697.1 645646 645996 D tRNA-binding domain protein 645646..645996 Clostridium botulinum A str. ATCC 19397 5396338 YP_001382963.1 CDS lepB-1 NC_009697.1 646170 646778 D identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I 646170..646778 Clostridium botulinum A str. ATCC 19397 5394543 YP_001382964.1 CDS CLB_0616 NC_009697.1 647444 647569 R identified by Glimmer3; hypothetical protein complement(647444..647569) Clostridium botulinum A str. ATCC 19397 5397579 YP_001382965.1 CDS CLB_0617 NC_009697.1 647607 648308 D identified by match to protein family HMM PF00072; match to protein family HMM PF04397; LytTr family DNA-binding response regulator 647607..648308 Clostridium botulinum A str. ATCC 19397 5396395 YP_001382966.1 CDS CLB_0618 NC_009697.1 648922 649041 D identified by Glimmer3; hypothetical protein 648922..649041 Clostridium botulinum A str. ATCC 19397 5398022 YP_001382967.1 CDS CLB_0619 NC_009697.1 649081 649206 D identified by Glimmer3; hypothetical protein 649081..649206 Clostridium botulinum A str. ATCC 19397 5395545 YP_001382968.1 CDS CLB_0620 NC_009697.1 649900 650046 D identified by Glimmer3; hypothetical protein 649900..650046 Clostridium botulinum A str. ATCC 19397 5396325 YP_001382969.1 CDS CLB_0621 NC_009697.1 650089 650208 D identified by Glimmer3; hypothetical protein 650089..650208 Clostridium botulinum A str. ATCC 19397 5395785 YP_001382970.1 CDS CLB_0622 NC_009697.1 650653 652005 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 650653..652005 Clostridium botulinum A str. ATCC 19397 5397557 YP_001382971.1 CDS CLB_0623 NC_009697.1 651998 652588 D identified by Glimmer3; hypothetical protein 651998..652588 Clostridium botulinum A str. ATCC 19397 5395114 YP_001382972.1 CDS CLB_0624 NC_009697.1 652625 653122 D hypothetical protein 652625..653122 Clostridium botulinum A str. ATCC 19397 5394696 YP_001382973.1 CDS CLB_0625 NC_009697.1 653157 654869 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF02463; ABC transporter ATP-binding protein/permease 653157..654869 Clostridium botulinum A str. ATCC 19397 5397798 YP_001382974.1 CDS CLB_0626 NC_009697.1 654979 655728 D lipoprotein 654979..655728 Clostridium botulinum A str. ATCC 19397 5396239 YP_001382975.1 CDS CLB_0627 NC_009697.1 655751 656230 D identified by match to protein family HMM PF00583; acetyltransferase 655751..656230 Clostridium botulinum A str. ATCC 19397 5397818 YP_001382976.1 CDS CLB_0628 NC_009697.1 656227 658695 D identified by match to protein family HMM PF02687; ABC transporter permease 656227..658695 Clostridium botulinum A str. ATCC 19397 5396203 YP_001382977.1 CDS CLB_0629 NC_009697.1 658710 659390 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 658710..659390 Clostridium botulinum A str. ATCC 19397 5396371 YP_001382978.1 CDS CLB_0630 NC_009697.1 659959 660222 D hypothetical protein 659959..660222 Clostridium botulinum A str. ATCC 19397 5395354 YP_001382979.1 CDS CLB_0631 NC_009697.1 660551 661417 D identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762; degV family protein 660551..661417 Clostridium botulinum A str. ATCC 19397 5395911 YP_001382980.1 CDS CLB_0632 NC_009697.1 661815 662327 D hypothetical protein 661815..662327 Clostridium botulinum A str. ATCC 19397 5395659 YP_001382981.1 CDS CLB_0633 NC_009697.1 662374 662490 R identified by Glimmer3; hypothetical protein complement(662374..662490) Clostridium botulinum A str. ATCC 19397 5398183 YP_001382982.1 CDS CLB_0634 NC_009697.1 662823 664733 D identified by match to protein family HMM PF00884; sulfatase family protein 662823..664733 Clostridium botulinum A str. ATCC 19397 5397954 YP_001382983.1 CDS CLB_0635 NC_009697.1 664869 666281 R identified by match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent transcriptional regulator complement(664869..666281) Clostridium botulinum A str. ATCC 19397 5396994 YP_001382984.1 CDS CLB_0636 NC_009697.1 666616 667839 R identified by match to protein family HMM PF01773; match to protein family HMM PF07662; match to protein family HMM PF07670; match to protein family HMM TIGR00804; NupC family nucleoside transporter complement(666616..667839) Clostridium botulinum A str. ATCC 19397 5394575 YP_001382985.1 CDS asnC NC_009697.1 669012 670403 D catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 669012..670403 Clostridium botulinum A str. ATCC 19397 5396979 YP_001382986.1 CDS CLB_0638 NC_009697.1 670697 671017 D identified by match to protein family HMM PF03551; PadR family transcriptional regulator 670697..671017 Clostridium botulinum A str. ATCC 19397 5397677 YP_001382987.1 CDS CLB_0639 NC_009697.1 671033 671569 D hypothetical protein 671033..671569 Clostridium botulinum A str. ATCC 19397 5396534 YP_001382988.1 CDS CLB_0640 NC_009697.1 671772 672227 D identified by match to protein family HMM PF04397; LytR family transcriptional regulator 671772..672227 Clostridium botulinum A str. ATCC 19397 5396708 YP_001382989.1 CDS CLB_0641 NC_009697.1 672229 672927 D hypothetical protein 672229..672927 Clostridium botulinum A str. ATCC 19397 5394569 YP_001382990.1 CDS CLB_0642 NC_009697.1 673529 674416 D identified by match to protein family HMM PF00165; match to protein family HMM PF06445; AraC family transcriptional regulator 673529..674416 Clostridium botulinum A str. ATCC 19397 5394800 YP_001382991.1 CDS CLB_0643 NC_009697.1 674845 675756 D identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein 674845..675756 Clostridium botulinum A str. ATCC 19397 5397286 YP_001382992.1 CDS CLB_0644 NC_009697.1 675769 676161 D identified by match to protein family HMM PF01381; DNA-binding protein 675769..676161 Clostridium botulinum A str. ATCC 19397 5395197 YP_001382993.1 CDS CLB_0645 NC_009697.1 676624 677763 D lipoprotein 676624..677763 Clostridium botulinum A str. ATCC 19397 5397683 YP_001382994.1 CDS CLB_0646 NC_009697.1 677960 679066 D lipoprotein 677960..679066 Clostridium botulinum A str. ATCC 19397 5395547 YP_001382995.1 CDS CLB_0647 NC_009697.1 679241 679924 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 679241..679924 Clostridium botulinum A str. ATCC 19397 5396504 YP_001382996.1 CDS CLB_0648 NC_009697.1 679929 681350 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 679929..681350 Clostridium botulinum A str. ATCC 19397 5394702 YP_001382997.1 CDS CLB_0649 NC_009697.1 681556 682272 D identified by match to protein family HMM PF02557; D-alanyl-D-alanine carboxypeptidase 681556..682272 Clostridium botulinum A str. ATCC 19397 5395668 YP_001382998.1 CDS CLB_0650 NC_009697.1 682293 682985 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 682293..682985 Clostridium botulinum A str. ATCC 19397 5395679 YP_001382999.1 CDS CLB_0651 NC_009697.1 683014 684096 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 683014..684096 Clostridium botulinum A str. ATCC 19397 5397258 YP_001383000.1 CDS CLB_0652 NC_009697.1 684256 685266 R perfringolysin O regulator protein complement(684256..685266) Clostridium botulinum A str. ATCC 19397 5396034 YP_001383001.1 CDS CLB_0653 NC_009697.1 685409 686221 R identified by match to protein family HMM PF00072; response regulator complement(685409..686221) Clostridium botulinum A str. ATCC 19397 5395654 YP_001383002.1 CDS CLB_0654 NC_009697.1 686218 687516 R identified by match to protein family HMM PF02518; sensor histidine kinase complement(686218..687516) Clostridium botulinum A str. ATCC 19397 5395641 YP_001383003.1 CDS rodA-1 NC_009697.1 687911 689071 D identified by match to protein family HMM PF01098; rod shape-determining protein RodA 687911..689071 Clostridium botulinum A str. ATCC 19397 5395952 YP_001383004.1 CDS cfa NC_009697.1 689380 690558 R identified by match to protein family HMM PF02353; match to protein family HMM PF08241; match to protein family HMM PF08242; cyclopropane-fatty-acyl-phospholipid synthase complement(689380..690558) Clostridium botulinum A str. ATCC 19397 5395100 YP_001383005.1 CDS CLB_0657 NC_009697.1 690886 691917 D identified by Glimmer3; hypothetical protein 690886..691917 Clostridium botulinum A str. ATCC 19397 5396151 YP_001383006.1 CDS CLB_0658 NC_009697.1 692087 693766 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 692087..693766 Clostridium botulinum A str. ATCC 19397 5396394 YP_001383007.1 CDS cat-1 NC_009697.1 694189 694815 R identified by match to protein family HMM PF00302; chloramphenicol acetyltransferase complement(694189..694815) Clostridium botulinum A str. ATCC 19397 5394678 YP_001383008.1 CDS CLB_0660 NC_009697.1 694980 695597 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 694980..695597 Clostridium botulinum A str. ATCC 19397 5395975 YP_001383009.1 CDS CLB_0661 NC_009697.1 695700 696170 D identified by match to protein family HMM PF00583; acetyltransferase 695700..696170 Clostridium botulinum A str. ATCC 19397 5397921 YP_001383010.1 CDS csaA NC_009697.1 696237 696566 R identified by match to protein family HMM PF01588; match to protein family HMM TIGR02222; csaA protein complement(696237..696566) Clostridium botulinum A str. ATCC 19397 5394799 YP_001383011.1 CDS CLB_0663 NC_009697.1 696774 697499 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(696774..697499) Clostridium botulinum A str. ATCC 19397 5397865 YP_001383012.1 CDS CLB_0664 NC_009697.1 697796 698347 R identified by match to protein family HMM PF01381; match to protein family HMM PF07883; DNA-binding cupin domain-containing protein complement(697796..698347) Clostridium botulinum A str. ATCC 19397 5397809 YP_001383013.1 CDS CLB_0665 NC_009697.1 698604 699194 D identified by match to protein family HMM TIGR00277; HDIG domain-containing protein 698604..699194 Clostridium botulinum A str. ATCC 19397 5394767 YP_001383014.1 CDS CLB_0666 NC_009697.1 699322 700338 D identified by match to protein family HMM PF04397; LytR family transcriptional regulator 699322..700338 Clostridium botulinum A str. ATCC 19397 5396568 YP_001383015.1 CDS CLB_0667 NC_009697.1 700721 701437 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 700721..701437 Clostridium botulinum A str. ATCC 19397 5397016 YP_001383016.1 CDS CLB_0668 NC_009697.1 701443 701577 D identified by Glimmer3; hypothetical protein 701443..701577 Clostridium botulinum A str. ATCC 19397 5397769 YP_001383017.1 CDS CLB_0669 NC_009697.1 701655 702878 R allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase complement(701655..702878) Clostridium botulinum A str. ATCC 19397 5396287 YP_001383018.1 CDS CLB_0670 NC_009697.1 703711 705606 D identified by match to protein family HMM PF00488; MutS domain-containing protein 703711..705606 Clostridium botulinum A str. ATCC 19397 5398156 YP_001383019.1 CDS CLB_0671 NC_009697.1 705714 706145 D identified by Glimmer3; hypothetical protein 705714..706145 Clostridium botulinum A str. ATCC 19397 5397270 YP_003264525.1 CDS CLB_0672 NC_009697.1 706203 706553 D hypothetical protein 706203..706553 Clostridium botulinum A str. ATCC 19397 5395234 YP_001383020.1 CDS CLB_0673 NC_009697.1 706640 707113 R identified by match to protein family HMM PF01243; nimA protein complement(706640..707113) Clostridium botulinum A str. ATCC 19397 5398084 YP_001383021.1 CDS CLB_0674 NC_009697.1 707136 707549 R identified by match to protein family HMM PF04304; hypothetical protein complement(707136..707549) Clostridium botulinum A str. ATCC 19397 5397536 YP_001383022.1 CDS CLB_0675 NC_009697.1 708174 708653 D identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase family protein 708174..708653 Clostridium botulinum A str. ATCC 19397 5395807 YP_001383023.1 CDS CLB_0676 NC_009697.1 708877 709188 R hypothetical protein complement(708877..709188) Clostridium botulinum A str. ATCC 19397 5394863 YP_001383024.1 CDS CLB_0677 NC_009697.1 709327 710736 R identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator complement(709327..710736) Clostridium botulinum A str. ATCC 19397 5396549 YP_001383025.1 CDS CLB_0678 NC_009697.1 710929 711237 D hypothetical protein 710929..711237 Clostridium botulinum A str. ATCC 19397 5395133 YP_001383026.1 CDS CLB_0679 NC_009697.1 711355 711552 D hypothetical protein 711355..711552 Clostridium botulinum A str. ATCC 19397 5397315 YP_001383027.1 CDS rhlE NC_009697.1 711811 713088 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; ATP-dependent RNA helicase RhlE 711811..713088 Clostridium botulinum A str. ATCC 19397 5395940 YP_001383028.1 CDS CLB_0681 NC_009697.1 713664 714152 D identified by match to protein family HMM PF02915; rubrerythrin 713664..714152 Clostridium botulinum A str. ATCC 19397 5398014 YP_001383029.1 CDS CLB_0682 NC_009697.1 714324 714761 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 714324..714761 Clostridium botulinum A str. ATCC 19397 5395944 YP_001383030.1 CDS CLB_0683 NC_009697.1 714789 716222 D identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; EmrB/QacA family drug resistance transporter 714789..716222 Clostridium botulinum A str. ATCC 19397 5397870 YP_001383031.1 CDS CLB_0684 NC_009697.1 716344 717534 R hypothetical protein complement(716344..717534) Clostridium botulinum A str. ATCC 19397 5394623 YP_001383032.1 CDS CLB_0685 NC_009697.1 717659 718534 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 717659..718534 Clostridium botulinum A str. ATCC 19397 5396067 YP_001383033.1 CDS CLB_0686 NC_009697.1 718661 720355 D identified by match to protein family HMM PF08011; hypothetical protein 718661..720355 Clostridium botulinum A str. ATCC 19397 5396035 YP_001383034.1 CDS CLB_0689 NC_009697.1 721134 721802 D identified by match to protein family HMM PF02698; sanA protein 721134..721802 Clostridium botulinum A str. ATCC 19397 5396576 YP_001383035.1 CDS CLB_0690 NC_009697.1 721933 724899 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; restriction/helicase domain-containing protein 721933..724899 Clostridium botulinum A str. ATCC 19397 5395921 YP_001383036.1 CDS CLB_0691 NC_009697.1 724939 725337 R identified by match to protein family HMM PF00293; mutator mutT protein complement(724939..725337) Clostridium botulinum A str. ATCC 19397 5394680 YP_001383037.1 CDS CLB_0692 NC_009697.1 725801 726640 D identified by match to protein family HMM PF00874; match to protein family HMM PF03123; BglG family transcriptional antiterminator 725801..726640 Clostridium botulinum A str. ATCC 19397 5394563 YP_001383038.1 CDS CLB_0693 NC_009697.1 726845 728686 D identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830; match to protein family HMM TIGR01995; PTS system beta-glucoside-specific transporter subunit IIABC 726845..728686 Clostridium botulinum A str. ATCC 19397 5396817 YP_001383039.1 CDS CLB_0694 NC_009697.1 728698 729516 D identified by match to protein family HMM PF02811; phosphotransferase domain-containing protein 728698..729516 Clostridium botulinum A str. ATCC 19397 5397103 YP_001383040.1 CDS CLB_0695 NC_009697.1 730143 730853 D identified by match to protein family HMM PF00027; match to protein family HMM PF00325; Crp/FNR family transcriptional regulator 730143..730853 Clostridium botulinum A str. ATCC 19397 5395530 YP_001383041.1 CDS CLB_0696 NC_009697.1 731012 732244 D identified by match to protein family HMM PF00258; match to protein family HMM PF00753; metallo-beta-lactamase family protein 731012..732244 Clostridium botulinum A str. ATCC 19397 5395956 YP_001383042.1 CDS CLB_0697 NC_009697.1 732304 733002 D identified by match to protein family HMM PF01814; match to protein family HMM PF04405; scdA protein 732304..733002 Clostridium botulinum A str. ATCC 19397 5396156 YP_001383043.1 CDS CLB_0698 NC_009697.1 733028 733783 D identified by match to protein family HMM PF01814; match to protein family HMM PF04282; hypothetical protein 733028..733783 Clostridium botulinum A str. ATCC 19397 5395437 YP_001383044.1 CDS CLB_0699 NC_009697.1 733856 734275 R identified by Glimmer3; hypothetical protein complement(733856..734275) Clostridium botulinum A str. ATCC 19397 5397362 YP_001383045.1 CDS gltS NC_009697.1 734943 736127 D identified by match to protein family HMM PF03616; match to protein family HMM TIGR00210; sodium/glutamate symporter 734943..736127 Clostridium botulinum A str. ATCC 19397 5395339 YP_001383046.1 CDS CLB_0701 NC_009697.1 736214 736330 R hypothetical protein complement(736214..736330) Clostridium botulinum A str. ATCC 19397 5395642 YP_001383047.1 CDS CLB_0702 NC_009697.1 736736 737203 D hypothetical protein 736736..737203 Clostridium botulinum A str. ATCC 19397 5394750 YP_001383048.1 CDS CLB_0703 NC_009697.1 737210 738553 D hypothetical protein 737210..738553 Clostridium botulinum A str. ATCC 19397 5396571 YP_001383049.1 CDS CLB_0704 NC_009697.1 738706 738852 R identified by Glimmer3; hypothetical protein complement(738706..738852) Clostridium botulinum A str. ATCC 19397 5395528 YP_001383050.1 CDS CLB_0705 NC_009697.1 738803 739006 R identified by Glimmer3; hypothetical protein complement(738803..739006) Clostridium botulinum A str. ATCC 19397 5394979 YP_001383051.1 CDS CLB_0706 NC_009697.1 739460 740446 D identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 739460..740446 Clostridium botulinum A str. ATCC 19397 5394958 YP_001383052.1 CDS CLB_0707 NC_009697.1 740788 741681 D identified by match to protein family HMM PF02653; ABC transporter permease 740788..741681 Clostridium botulinum A str. ATCC 19397 5397233 YP_001383053.1 CDS CLB_0708 NC_009697.1 741644 742399 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 741644..742399 Clostridium botulinum A str. ATCC 19397 5396899 YP_001383054.1 CDS CLB_0709 NC_009697.1 742430 743389 D identified by match to protein family HMM PF04392; ABC transporter substrate-binding protein 742430..743389 Clostridium botulinum A str. ATCC 19397 5396843 YP_001383055.1 CDS CLB_0710 NC_009697.1 743403 743783 D identified by Glimmer3; hypothetical protein 743403..743783 Clostridium botulinum A str. ATCC 19397 5395076 YP_001383056.1 CDS CLB_0711 NC_009697.1 744503 745186 D hypothetical protein 744503..745186 Clostridium botulinum A str. ATCC 19397 5396063 YP_001383057.1 CDS CLB_0712 NC_009697.1 745477 746898 R identified by Glimmer3; hypothetical protein complement(745477..746898) Clostridium botulinum A str. ATCC 19397 5395099 YP_001383058.1 CDS CLB_0713 NC_009697.1 746895 747458 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 complement(746895..747458) Clostridium botulinum A str. ATCC 19397 5395186 YP_001383059.1 CDS CLB_0714 NC_009697.1 747687 748646 D identified by match to protein family HMM PF01207; dihydrouridine synthase family protein 747687..748646 Clostridium botulinum A str. ATCC 19397 5396785 YP_001383060.1 CDS greA-1 NC_009697.1 748782 749246 D identified by match to protein family HMM PF01272; match to protein family HMM PF03449; match to protein family HMM TIGR01462; transcription elongation factor GreA 748782..749246 Clostridium botulinum A str. ATCC 19397 5396489 YP_001383061.1 CDS CLB_0716 NC_009697.1 749407 750159 D hypothetical protein 749407..750159 Clostridium botulinum A str. ATCC 19397 5395844 YP_001383062.1 CDS CLB_0717 NC_009697.1 750434 751891 D identified by match to protein family HMM PF02384; type I restriction-modification system, M subunit 750434..751891 Clostridium botulinum A str. ATCC 19397 5397321 YP_001383063.1 CDS CLB_0718 NC_009697.1 751986 753146 D identified by match to protein family HMM PF01420; type I restriction-modification system subunit S 751986..753146 Clostridium botulinum A str. ATCC 19397 5395886 YP_001383064.1 CDS CLB_0719 NC_009697.1 753234 753419 D identified by Glimmer3; hypothetical protein 753234..753419 Clostridium botulinum A str. ATCC 19397 5394790 YP_001383065.1 CDS CLB_0720 NC_009697.1 753638 753844 D hypothetical protein 753638..753844 Clostridium botulinum A str. ATCC 19397 5397586 YP_001383066.1 CDS CLB_0721 NC_009697.1 753988 757335 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04313; match to protein family HMM PF04851; type I restriction-modification system, R subunit 753988..757335 Clostridium botulinum A str. ATCC 19397 5395063 YP_001383067.1 CDS CLB_0722 NC_009697.1 757393 760047 D identified by match to protein family HMM PF00580; ATP-dependent DNA helicase PcrA 757393..760047 Clostridium botulinum A str. ATCC 19397 5394950 YP_001383068.1 CDS CLB_0723 NC_009697.1 760212 760328 R identified by Glimmer3; hypothetical protein complement(760212..760328) Clostridium botulinum A str. ATCC 19397 5398176 YP_001383069.1 CDS CLB_0724 NC_009697.1 760615 761436 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 760615..761436 Clostridium botulinum A str. ATCC 19397 5396535 YP_001383070.1 CDS CLB_0725 NC_009697.1 761906 762895 D identified by match to protein family HMM PF01497; ferrichrome ABC transporter ferrichrome-binding protein 761906..762895 Clostridium botulinum A str. ATCC 19397 5394558 YP_001383071.1 CDS fhuB NC_009697.1 762991 764031 D identified by match to protein family HMM PF01032; ferrichrome ABC transporter permease FhuB 762991..764031 Clostridium botulinum A str. ATCC 19397 5396544 YP_001383072.1 CDS fhuG NC_009697.1 764031 765071 D identified by match to protein family HMM PF01032; ferrichrome ABC transporter permease FhuG 764031..765071 Clostridium botulinum A str. ATCC 19397 5396775 YP_001383073.1 CDS fhuC NC_009697.1 765299 766084 D identified by match to protein family HMM PF00005; ferrichrome ABC transporter ATP-binding protein 765299..766084 Clostridium botulinum A str. ATCC 19397 5396697 YP_001383074.1 CDS nifH NC_009697.1 766114 766863 D identified by match to protein family HMM PF00142; nitrogenase iron protein 766114..766863 Clostridium botulinum A str. ATCC 19397 5394701 YP_001383075.1 CDS CLB_0730 NC_009697.1 766866 768134 D identified by Glimmer3; hypothetical protein 766866..768134 Clostridium botulinum A str. ATCC 19397 5396757 YP_001383076.1 CDS CLB_0731 NC_009697.1 768174 769412 D identified by Glimmer3; hypothetical protein 768174..769412 Clostridium botulinum A str. ATCC 19397 5397062 YP_001383077.1 CDS CLB_0732 NC_009697.1 769735 771747 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein 769735..771747 Clostridium botulinum A str. ATCC 19397 5397629 YP_001383078.1 CDS CLB_0733 NC_009697.1 771844 771963 D identified by Glimmer3; hypothetical protein 771844..771963 Clostridium botulinum A str. ATCC 19397 5396000 YP_001383079.1 CDS CLB_0734 NC_009697.1 772043 773452 R hypothetical protein complement(772043..773452) Clostridium botulinum A str. ATCC 19397 5397296 YP_001383080.1 CDS gcvT NC_009697.1 774031 775143 D catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 774031..775143 Clostridium botulinum A str. ATCC 19397 5397737 YP_001383081.1 CDS gcvH NC_009697.1 775268 775660 D part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 775268..775660 Clostridium botulinum A str. ATCC 19397 5397522 YP_001383082.1 CDS gcvPA NC_009697.1 775663 777003 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 775663..777003 Clostridium botulinum A str. ATCC 19397 5395079 YP_001383083.1 CDS gcvPB NC_009697.1 777003 778457 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 777003..778457 Clostridium botulinum A str. ATCC 19397 5395077 YP_001383084.1 CDS CLB_0739 NC_009697.1 778651 780039 D identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF01266; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350; glycine cleavage system, dihydrolipoamide dehydrogenase 778651..780039 Clostridium botulinum A str. ATCC 19397 5397660 YP_001383085.1 CDS CLB_0740 NC_009697.1 780057 781034 D identified by match to protein family HMM PF03099; match to protein family HMM TIGR00545; lipoate-protein ligase A 780057..781034 Clostridium botulinum A str. ATCC 19397 5397740 YP_001383086.1 CDS CLB_0741 NC_009697.1 781444 783537 D identified by Glimmer3; hypothetical protein 781444..783537 Clostridium botulinum A str. ATCC 19397 5396632 YP_001383087.1 CDS CLB_0742 NC_009697.1 783899 784735 D identified by match to protein family HMM PF00165; match to protein family HMM PF06445; AraC family transcriptional regulator 783899..784735 Clostridium botulinum A str. ATCC 19397 5396719 YP_001383088.1 CDS CLB_0743 NC_009697.1 784829 785377 D identified by Glimmer3; hypothetical protein 784829..785377 Clostridium botulinum A str. ATCC 19397 5394619 YP_001383089.1 CDS CLB_0744 NC_009697.1 785579 785743 D hypothetical protein 785579..785743 Clostridium botulinum A str. ATCC 19397 5397148 YP_001383090.1 CDS CLB_0745 NC_009697.1 786453 787217 D hypothetical protein 786453..787217 Clostridium botulinum A str. ATCC 19397 5394556 YP_001383091.1 CDS CLB_0746 NC_009697.1 787271 787729 D hypothetical protein 787271..787729 Clostridium botulinum A str. ATCC 19397 5397349 YP_001383092.1 CDS CLB_0747 NC_009697.1 788055 788819 D identified by match to protein family HMM PF00376; MerR family transcriptional regulator 788055..788819 Clostridium botulinum A str. ATCC 19397 5397280 YP_001383093.1 CDS CLB_0748 NC_009697.1 788871 789602 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 788871..789602 Clostridium botulinum A str. ATCC 19397 5396961 YP_001383094.1 CDS CLB_0749 NC_009697.1 789589 790332 D identified by match to protein family HMM PF01061; drug resistance ABC-2 type transporter, permease 789589..790332 Clostridium botulinum A str. ATCC 19397 5396847 YP_001383095.1 CDS CLB_0750 NC_009697.1 790540 792777 D identified by match to protein family HMM PF00005; drug resistance ABC transporter ATP-binding protein 790540..792777 Clostridium botulinum A str. ATCC 19397 5396204 YP_001383096.1 CDS CLB_0751 NC_009697.1 792971 795229 D helicase 792971..795229 Clostridium botulinum A str. ATCC 19397 5397097 YP_001383097.1 CDS CLB_0752 NC_009697.1 795499 796206 R identified by match to protein family HMM PF07505; hypothetical protein complement(795499..796206) Clostridium botulinum A str. ATCC 19397 5396307 YP_001383098.1 CDS CLB_0753 NC_009697.1 796289 797143 R identified by match to protein family HMM PF00165; match to protein family HMM PF06445; AraC family transcriptional regulator complement(796289..797143) Clostridium botulinum A str. ATCC 19397 5395413 YP_001383099.1 CDS CLB_0754 NC_009697.1 797635 798516 R identified by match to protein family HMM PF00892; EamA family protein complement(797635..798516) Clostridium botulinum A str. ATCC 19397 5395709 YP_001383100.1 CDS CLB_0756 NC_009697.1 799572 799832 D identified by match to protein family HMM PF04994; tfoX domain-containing protein 799572..799832 Clostridium botulinum A str. ATCC 19397 5396587 YP_001383101.1 CDS CLB_0757 NC_009697.1 799858 800352 D identified by match to protein family HMM PF00583; acetyltransferase 799858..800352 Clostridium botulinum A str. ATCC 19397 5397498 YP_001383102.1 CDS CLB_0758 NC_009697.1 800531 801529 R identified by match to protein family HMM PF08541; match to protein family HMM PF08545; 3-oxoacyl-ACP synthase complement(800531..801529) Clostridium botulinum A str. ATCC 19397 5397603 YP_001383103.1 CDS CLB_0759 NC_009697.1 801778 803244 D identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 801778..803244 Clostridium botulinum A str. ATCC 19397 5397047 YP_001383104.1 CDS CLB_0760 NC_009697.1 803737 804027 D hypothetical protein 803737..804027 Clostridium botulinum A str. ATCC 19397 5397875 YP_001383105.1 CDS CLB_0761 NC_009697.1 804081 804194 R identified by Glimmer3; hypothetical protein complement(804081..804194) Clostridium botulinum A str. ATCC 19397 5394899 YP_001383106.1 CDS CLB_0762 NC_009697.1 804226 805779 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 804226..805779 Clostridium botulinum A str. ATCC 19397 5394674 YP_001383107.1 CDS CLB_0763 NC_009697.1 805893 806027 D identified by Glimmer3; hypothetical protein 805893..806027 Clostridium botulinum A str. ATCC 19397 5398063 YP_001383108.1 CDS CLB_0764 NC_009697.1 806081 806707 D identified by match to protein family HMM PF01965; DJ-1/PfpI family protein 806081..806707 Clostridium botulinum A str. ATCC 19397 5395223 YP_001383109.1 CDS CLB_0765 NC_009697.1 806934 807842 R identified by match to protein family HMM PF00291; cysteine synthase complement(806934..807842) Clostridium botulinum A str. ATCC 19397 5395188 YP_001383110.1 CDS luxS NC_009697.1 807826 808278 R catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase complement(807826..808278) Clostridium botulinum A str. ATCC 19397 5395257 YP_001383111.1 CDS metC NC_009697.1 808280 809422 R identified by match to protein family HMM PF01053; match to protein family HMM PF01212; cystathionine beta-lyase complement(808280..809422) Clostridium botulinum A str. ATCC 19397 5395452 YP_001383112.1 CDS CLB_0768 NC_009697.1 809523 810149 R identified by match to protein family HMM PF01209; match to protein family HMM PF02390; match to protein family HMM PF08241; match to protein family HMM PF08242; hypothetical protein complement(809523..810149) Clostridium botulinum A str. ATCC 19397 5396431 YP_001383113.1 CDS CLB_0769 NC_009697.1 810708 810821 R identified by Glimmer3; hypothetical protein complement(810708..810821) Clostridium botulinum A str. ATCC 19397 5397058 YP_001383114.1 CDS CLB_0770 NC_009697.1 811059 812912 D identified by match to protein family HMM PF00704; glycosyl hydrolase family protein 811059..812912 Clostridium botulinum A str. ATCC 19397 5394885 YP_001383115.1 CDS CLB_0771 NC_009697.1 813278 813517 D identified by match to protein family HMM PF00403; heavy metal binding protein 813278..813517 Clostridium botulinum A str. ATCC 19397 5394718 YP_001383116.1 CDS CLB_0772 NC_009697.1 813631 813963 R hypothetical protein complement(813631..813963) Clostridium botulinum A str. ATCC 19397 5397217 YP_001383117.1 CDS CLB_0773 NC_009697.1 814051 814551 R identified by match to protein family HMM PF06172; hypothetical protein complement(814051..814551) Clostridium botulinum A str. ATCC 19397 5397213 YP_001383118.1 CDS CLB_0774 NC_009697.1 815085 815693 R identified by Glimmer3; hypothetical protein complement(815085..815693) Clostridium botulinum A str. ATCC 19397 5398195 YP_001383119.1 CDS CLB_0775 NC_009697.1 815786 816208 R identified by match to protein family HMM PF01381; DNA-binding protein complement(815786..816208) Clostridium botulinum A str. ATCC 19397 5397968 YP_001383120.1 CDS CLB_0776 NC_009697.1 816352 816552 D identified by match to protein family HMM PF01381; DNA-binding protein 816352..816552 Clostridium botulinum A str. ATCC 19397 5397095 YP_001383121.1 CDS CLB_0777 NC_009697.1 816654 817913 D identified by match to protein family HMM PF04271; match to protein family HMM TIGR01446; dnaD protein 816654..817913 Clostridium botulinum A str. ATCC 19397 5397178 YP_001383122.1 CDS CLB_0778 NC_009697.1 817932 818471 D identified by match to protein family HMM TIGR02937; sigma-70 family RNA polymerase sigma factor 817932..818471 Clostridium botulinum A str. ATCC 19397 5397972 YP_001383123.1 CDS CLB_0779 NC_009697.1 818557 818913 D identified by match to protein family HMM TIGR02436; hypothetical protein 818557..818913 Clostridium botulinum A str. ATCC 19397 5395710 YP_001383124.1 CDS CLB_0780 NC_009697.1 819054 819233 D hypothetical protein 819054..819233 Clostridium botulinum A str. ATCC 19397 5397026 YP_001383125.1 CDS CLB_0781 NC_009697.1 819477 820307 D identified by Glimmer3; hypothetical protein 819477..820307 Clostridium botulinum A str. ATCC 19397 5395436 YP_001383126.1 CDS CLB_0782 NC_009697.1 820545 820766 D hypothetical protein 820545..820766 Clostridium botulinum A str. ATCC 19397 5398198 YP_001383127.1 CDS CLB_0783 NC_009697.1 820786 821013 D hypothetical protein 820786..821013 Clostridium botulinum A str. ATCC 19397 5394808 YP_001383128.1 CDS CLB_0784 NC_009697.1 821162 821866 D identified by match to protein family HMM PF01471; match to protein family HMM PF01510; N-acetylmuramoyl-L-alanine amidase 821162..821866 Clostridium botulinum A str. ATCC 19397 5397882 YP_001383129.1 CDS CLB_0786 NC_009697.1 822578 822856 D hypothetical protein 822578..822856 Clostridium botulinum A str. ATCC 19397 5398009 YP_001383130.1 CDS CLB_0787 NC_009697.1 822887 823120 D bacteriocin 822887..823120 Clostridium botulinum A str. ATCC 19397 5396822 YP_001383131.1 CDS CLB_0788 NC_009697.1 823211 823429 D identified by Glimmer3; hypothetical protein 823211..823429 Clostridium botulinum A str. ATCC 19397 5395040 YP_001383132.1 CDS CLB_0789 NC_009697.1 823401 824177 D hypothetical protein 823401..824177 Clostridium botulinum A str. ATCC 19397 5395264 YP_001383133.1 CDS CLB_0790 NC_009697.1 824669 825010 R identified by Glimmer3; hypothetical protein complement(824669..825010) Clostridium botulinum A str. ATCC 19397 5397334 YP_001383134.1 CDS CLB_0791 NC_009697.1 825551 826003 D hypothetical protein 825551..826003 Clostridium botulinum A str. ATCC 19397 5395645 YP_001383135.1 CDS CLB_0792 NC_009697.1 826302 827279 R identified by match to protein family HMM PF01476; match to protein family HMM PF07485; LysM domain-containing protein complement(826302..827279) Clostridium botulinum A str. ATCC 19397 5396738 YP_001383136.1 CDS CLB_0793 NC_009697.1 827544 827960 D identified by similarity to SP:Q01257; match to protein family HMM PF01451; arsenate reductase 827544..827960 Clostridium botulinum A str. ATCC 19397 5395941 YP_001383137.1 CDS CLB_0794 NC_009697.1 828296 828739 R identified by match to protein family HMM TIGR01909; hypothetical protein complement(828296..828739) Clostridium botulinum A str. ATCC 19397 5397139 YP_001383138.1 CDS arsR NC_009697.1 829187 829510 D identified by match to protein family HMM PF01022; arsenical resistance operon repressor ArsR 829187..829510 Clostridium botulinum A str. ATCC 19397 5398100 YP_001383139.1 CDS arsD NC_009697.1 829532 829903 D identified by match to protein family HMM PF06953; arsenical resistence operon repressor ArsD 829532..829903 Clostridium botulinum A str. ATCC 19397 5397493 YP_001383140.1 CDS arsA NC_009697.1 829922 831667 D identified by match to protein family HMM PF02374; match to protein family HMM TIGR00345; arsenical pump-driving ATPase ArsA 829922..831667 Clostridium botulinum A str. ATCC 19397 5395124 YP_001383141.1 CDS arsB NC_009697.1 831766 832836 D identified by match to protein family HMM PF01758; match to protein family HMM TIGR00832; arsenical-resistance protein 831766..832836 Clostridium botulinum A str. ATCC 19397 5397627 YP_001383142.1 CDS CLB_0799 NC_009697.1 833113 833919 D Selenoprotein. identified by similarity to GB:ABB33009.1; match to protein family HMM PF08241; match to protein family HMM PF08242; UbiE/COQ5 family methlytransferase 833113..833919 Clostridium botulinum A str. ATCC 19397 5397942 YP_001383143.1 CDS CLB_0801 NC_009697.1 834230 834778 D identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein 834230..834778 Clostridium botulinum A str. ATCC 19397 5396047 YP_001383144.1 CDS CLB_0802 NC_009697.1 835286 835864 D identified by match to protein family HMM PF00440; transcriptional regulator 835286..835864 Clostridium botulinum A str. ATCC 19397 5397538 YP_001383145.1 CDS CLB_0803 NC_009697.1 835874 836131 D identified by Glimmer3; hypothetical protein 835874..836131 Clostridium botulinum A str. ATCC 19397 5394854 YP_001383146.1 CDS CLB_0804 NC_009697.1 836160 836348 D hypothetical protein 836160..836348 Clostridium botulinum A str. ATCC 19397 5397223 YP_001383147.1 CDS CLB_0805 NC_009697.1 836603 836797 D identified by match to protein family HMM PF01381; DNA-binding protein 836603..836797 Clostridium botulinum A str. ATCC 19397 5395730 YP_001383148.1 CDS CLB_0806 NC_009697.1 836801 837232 D identified by Glimmer3; hypothetical protein 836801..837232 Clostridium botulinum A str. ATCC 19397 5395417 YP_001383149.1 CDS CLB_0807 NC_009697.1 837606 838541 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 837606..838541 Clostridium botulinum A str. ATCC 19397 5394589 YP_001383150.1 CDS CLB_0808 NC_009697.1 838534 839670 D hypothetical protein 838534..839670 Clostridium botulinum A str. ATCC 19397 5396005 YP_001383151.1 CDS CLB_0809 NC_009697.1 840361 840822 D hypothetical protein 840361..840822 Clostridium botulinum A str. ATCC 19397 5396405 YP_001383152.1 CDS thyA NC_009697.1 840812 841786 D identified by match to protein family HMM PF00303; thymidylate synthase 840812..841786 Clostridium botulinum A str. ATCC 19397 5397914 YP_001383153.1 CDS CLB_0811 NC_009697.1 841798 842556 D identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242; UbiE/COQ5 family methlytransferase 841798..842556 Clostridium botulinum A str. ATCC 19397 5397966 YP_001383154.1 CDS CLB_0812 NC_009697.1 842602 843816 D thiaminase I 842602..843816 Clostridium botulinum A str. ATCC 19397 5396840 YP_001383155.1 CDS thiD-2 NC_009697.1 843894 844721 D identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase 843894..844721 Clostridium botulinum A str. ATCC 19397 5395505 YP_001383156.1 CDS CLB_0814 NC_009697.1 844893 845126 D identified by Glimmer3; hypothetical protein 844893..845126 Clostridium botulinum A str. ATCC 19397 5395306 YP_001383157.1 CDS CLB_0815 NC_009697.1 845335 845799 R identified by match to protein family HMM PF06695; transporter complement(845335..845799) Clostridium botulinum A str. ATCC 19397 5397638 YP_001383158.1 CDS CLB_0816 NC_009697.1 846195 846983 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 846195..846983 Clostridium botulinum A str. ATCC 19397 5398146 YP_001383159.1 CDS CLB_0817 NC_009697.1 846986 848683 D hypothetical protein 846986..848683 Clostridium botulinum A str. ATCC 19397 5395563 YP_001383160.1 CDS CLB_0818 NC_009697.1 848959 849651 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 848959..849651 Clostridium botulinum A str. ATCC 19397 5396913 YP_001383161.1 CDS CLB_0819 NC_009697.1 850072 850992 D identified by match to protein family HMM PF00005; bacitracin ABC transporter ATP-binding protein 850072..850992 Clostridium botulinum A str. ATCC 19397 5394549 YP_001383162.1 CDS CLB_0820 NC_009697.1 850992 851783 D hypothetical protein 850992..851783 Clostridium botulinum A str. ATCC 19397 5397168 YP_001383163.1 CDS CLB_0821 NC_009697.1 852034 852891 D identified by match to protein family HMM PF00165; match to protein family HMM PF06445; AraC family transcriptional regulator 852034..852891 Clostridium botulinum A str. ATCC 19397 5398024 YP_001383164.1 CDS CLB_0822 NC_009697.1 852936 853841 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 852936..853841 Clostridium botulinum A str. ATCC 19397 5395066 YP_001383165.1 CDS CLB_0823 NC_009697.1 854796 855791 D hypothetical protein 854796..855791 Clostridium botulinum A str. ATCC 19397 5397658 YP_001383166.1 CDS CLB_0824 NC_009697.1 856071 857096 D hypothetical protein 856071..857096 Clostridium botulinum A str. ATCC 19397 5397171 YP_001383167.1 CDS CLB_0825 NC_009697.1 857280 857972 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 857280..857972 Clostridium botulinum A str. ATCC 19397 5397792 YP_001383168.1 CDS CLB_0826 NC_009697.1 857959 860625 D identified by match to protein family HMM PF02687; ABC transporter permease 857959..860625 Clostridium botulinum A str. ATCC 19397 5394743 YP_001383169.1 CDS CLB_0827 NC_009697.1 860836 860955 D identified by Glimmer3; hypothetical protein 860836..860955 Clostridium botulinum A str. ATCC 19397 5396602 YP_001383170.1 CDS CLB_0828 NC_009697.1 861183 861896 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 861183..861896 Clostridium botulinum A str. ATCC 19397 5397067 YP_001383171.1 CDS CLB_0829 NC_009697.1 862050 863312 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 862050..863312 Clostridium botulinum A str. ATCC 19397 5395001 YP_001383172.1 CDS CLB_0830 NC_009697.1 863502 864143 D identified by match to protein family HMM PF06555; hypothetical protein 863502..864143 Clostridium botulinum A str. ATCC 19397 5395564 YP_001383173.1 CDS CLB_0831 NC_009697.1 864234 864422 R identified by match to protein family HMM TIGR02861; small acid-soluble spore protein, H-type complement(864234..864422) Clostridium botulinum A str. ATCC 19397 5395202 YP_001383174.1 CDS CLB_0832 NC_009697.1 864752 865531 D hypothetical protein 864752..865531 Clostridium botulinum A str. ATCC 19397 5395085 YP_001383175.1 CDS dapB-1 NC_009697.1 866197 866994 D identified by match to protein family HMM PF01113; match to protein family HMM PF05173; match to protein family HMM TIGR00036; dihydrodipicolinate reductase 866197..866994 Clostridium botulinum A str. ATCC 19397 5396266 YP_001383176.1 CDS CLB_0834 NC_009697.1 867016 867855 D identified by match to protein family HMM PF00581; sulfurtransferase family protein 867016..867855 Clostridium botulinum A str. ATCC 19397 5394935 YP_001383177.1 CDS CLB_0835 NC_009697.1 868363 869232 R identified by Glimmer3; hypothetical protein complement(868363..869232) Clostridium botulinum A str. ATCC 19397 5395696 YP_001383178.1 CDS CLB_0836 NC_009697.1 869532 870311 R identified by Glimmer3; hypothetical protein complement(869532..870311) Clostridium botulinum A str. ATCC 19397 5397371 YP_001383179.1 CDS CLB_0837 NC_009697.1 870357 870647 R identified by Glimmer3; hypothetical protein complement(870357..870647) Clostridium botulinum A str. ATCC 19397 5394996 YP_001383180.1 CDS CLB_0838 NC_009697.1 871139 871255 D identified by Glimmer3; hypothetical protein 871139..871255 Clostridium botulinum A str. ATCC 19397 5397606 YP_001383181.1 CDS CLB_0839 NC_009697.1 871274 871531 D identified by Glimmer3; hypothetical protein 871274..871531 Clostridium botulinum A str. ATCC 19397 5397472 YP_001383182.1 CDS CLB_0840 NC_009697.1 871825 873246 D identified by match to protein family HMM PF00669; flagellin 871825..873246 Clostridium botulinum A str. ATCC 19397 5397262 YP_001383183.1 CDS CLB_0841 NC_009697.1 873323 873484 D identified by Glimmer3; hypothetical protein 873323..873484 Clostridium botulinum A str. ATCC 19397 5395409 YP_001383184.1 CDS CLB_0842 NC_009697.1 873760 874113 R transposase, OrfA complement(873760..874113) Clostridium botulinum A str. ATCC 19397 5394645 YP_001383185.1 CDS ha70 NC_009697.1 874208 876088 R identified by match to protein family HMM PF03505; hemagglutinin component HA70 complement(874208..876088) Clostridium botulinum A str. ATCC 19397 5396594 YP_001383186.1 CDS ha17 NC_009697.1 876102 876542 R identified by match to protein family HMM PF05588; hemagglutinin component HA17 complement(876102..876542) Clostridium botulinum A str. ATCC 19397 5395132 YP_001383187.1 CDS ha33 NC_009697.1 876605 877486 R identified by match to protein family HMM PF00652; hemagglutinin component HA33 complement(876605..877486) Clostridium botulinum A str. ATCC 19397 5397118 YP_001383188.1 CDS botR NC_009697.1 877713 878249 D identified by similarity to PIR:S68219; match to protein family HMM PF08281; match to protein family HMM TIGR02937; match to protein family HMM TIGR03209; transcriptional regulator BotR, P-21 877713..878249 Clostridium botulinum A str. ATCC 19397 5397956 YP_001383189.1 CDS ntnH NC_009697.1 878411 881992 D identified by match to protein family HMM PF01742; match to protein family HMM PF07953; match to protein family HMM PF08470; botulinum neurotoxin type A1 nontoxic-nonhemagglutinin subunit 878411..881992 Clostridium botulinum A str. ATCC 19397 5397468 YP_001383190.1 CDS boNT/A1 NC_009697.1 882036 885926 D identified by similarity to SP:P30996; match to protein family HMM PF01742; match to protein family HMM PF07951; match to protein family HMM PF07952; match to protein family HMM PF07953; botulinum neurotoxin type A1 882036..885926 Clostridium botulinum A str. ATCC 19397 5397793 YP_001383191.1 CDS CLB_0852 NC_009697.1 888111 889508 D identified by Glimmer3; hypothetical protein 888111..889508 Clostridium botulinum A str. ATCC 19397 5397790 YP_001383192.1 CDS CLB_0853 NC_009697.1 889844 891013 D identified by match to protein family HMM PF01979; amidohydrolase 889844..891013 Clostridium botulinum A str. ATCC 19397 5395025 YP_001383193.1 CDS brnQ-1 NC_009697.1 891579 892880 D identified by match to protein family HMM PF05525; match to protein family HMM TIGR00796; branched-chain amino acid transport system II carrier protein 891579..892880 Clostridium botulinum A str. ATCC 19397 5396731 YP_001383194.1 CDS brnQ-2 NC_009697.1 893031 894347 D identified by match to protein family HMM PF05525; match to protein family HMM TIGR00796; branched-chain amino acid transport system II carrier protein 893031..894347 Clostridium botulinum A str. ATCC 19397 5396829 YP_001383195.1 CDS CLB_0856 NC_009697.1 894426 896906 R identified by match to protein family HMM PF00015; match to protein family HMM PF00496; methyl-accepting chemotaxis protein/ extracellular solute-binding protein family 5 complement(894426..896906) Clostridium botulinum A str. ATCC 19397 5395162 YP_001383196.1 CDS feoA-1 NC_009697.1 897129 897365 D identified by match to protein family HMM PF04023; ferrous iron transport protein A 897129..897365 Clostridium botulinum A str. ATCC 19397 5396335 YP_001383197.1 CDS cobC NC_009697.1 900527 901141 D identified by match to protein family HMM PF00300; match to protein family HMM TIGR03162; alpha-ribazole-5'-phosphate phosphatase 900527..901141 Clostridium botulinum A str. ATCC 19397 5396825 YP_001383198.1 CDS CLB_0861 NC_009697.1 901286 902848 D identified by match to protein family HMM PF04294; match to protein family HMM PF07501; von Willebrand factor A 901286..902848 Clostridium botulinum A str. ATCC 19397 5397874 YP_001383199.1 CDS cobS NC_009697.1 903119 903865 D catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase 903119..903865 Clostridium botulinum A str. ATCC 19397 5397582 YP_001383200.1 CDS CLB_0863 NC_009697.1 904323 905099 D hypothetical protein 904323..905099 Clostridium botulinum A str. ATCC 19397 5397029 YP_001383201.1 CDS CLB_0864 NC_009697.1 905408 905689 D hypothetical protein 905408..905689 Clostridium botulinum A str. ATCC 19397 5396909 YP_001383202.1 CDS CLB_0865 NC_009697.1 905820 906002 D hypothetical protein 905820..906002 Clostridium botulinum A str. ATCC 19397 5394994 YP_001383203.1 CDS CLB_0866 NC_009697.1 906020 906268 D identified by match to protein family HMM PF07875; hypothetical protein 906020..906268 Clostridium botulinum A str. ATCC 19397 5398207 YP_001383204.1 CDS CLB_0867 NC_009697.1 906837 908189 D hypothetical protein 906837..908189 Clostridium botulinum A str. ATCC 19397 5394659 YP_001383205.1 CDS CLB_0868 NC_009697.1 908460 908813 D identified by match to protein family HMM PF01242; 6-pyruvoyl-tetrahydropterin synthase 908460..908813 Clostridium botulinum A str. ATCC 19397 5397738 YP_001383206.1 CDS folP NC_009697.1 908908 910104 D identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase 908908..910104 Clostridium botulinum A str. ATCC 19397 5396557 YP_001383207.1 CDS CLB_0870 NC_009697.1 910236 910487 D hypothetical protein 910236..910487 Clostridium botulinum A str. ATCC 19397 5395023 YP_001383208.1 CDS folK NC_009697.1 910587 911042 D identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 910587..911042 Clostridium botulinum A str. ATCC 19397 5394673 YP_001383209.1 CDS CLB_0872 NC_009697.1 911161 911601 D identified by match to protein family HMM PF00011; heat shock protein 911161..911601 Clostridium botulinum A str. ATCC 19397 5396162 YP_001383210.1 CDS CLB_0873 NC_009697.1 911921 913273 D identified by match to protein family HMM PF00376; match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242; MerR family transcriptional regulator 911921..913273 Clostridium botulinum A str. ATCC 19397 5397913 YP_001383211.1 CDS CLB_0874 NC_009697.1 913328 914503 D identified by match to protein family HMM PF01041; exopolysaccharide biosynthesis protein 913328..914503 Clostridium botulinum A str. ATCC 19397 5395371 YP_001383212.1 CDS CLB_0875 NC_009697.1 914645 915766 D identified by match to protein family HMM PF01041; pleiotropic regulatory protein 914645..915766 Clostridium botulinum A str. ATCC 19397 5395640 YP_001383213.1 CDS nimA NC_009697.1 916625 917119 D identified by match to protein family HMM PF01243; nitroimidazole resistance protein NimA 916625..917119 Clostridium botulinum A str. ATCC 19397 5396500 YP_001383214.1 CDS CLB_0877 NC_009697.1 917590 918102 D identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; match to protein family HMM TIGR02954; ECF subfamily RNA polymerase sigma factor 917590..918102 Clostridium botulinum A str. ATCC 19397 5396446 YP_001383215.1 CDS CLB_0878 NC_009697.1 918107 919270 D identified by Glimmer3; hypothetical protein 918107..919270 Clostridium botulinum A str. ATCC 19397 5397937 YP_001383216.1 CDS CLB_0879 NC_009697.1 919562 920116 R flavoredoxin complement(919562..920116) Clostridium botulinum A str. ATCC 19397 5397599 YP_001383217.1 CDS CLB_0880 NC_009697.1 920435 921247 D identified by match to protein family HMM PF00561; non-heme haloperoxidase family protein 920435..921247 Clostridium botulinum A str. ATCC 19397 5395705 YP_001383218.1 CDS cadD NC_009697.1 921547 922215 D identified by match to protein family HMM PF03596; cadmium resistance transporter CadD 921547..922215 Clostridium botulinum A str. ATCC 19397 5397850 YP_001383219.1 CDS CLB_0882 NC_009697.1 922364 922780 D identified by match to protein family HMM PF04463; hypothetical protein 922364..922780 Clostridium botulinum A str. ATCC 19397 5394806 YP_001383220.1 CDS CLB_0883 NC_009697.1 922977 923345 D identified by match to protein family HMM PF01037; AsnC family transcriptional regulator 922977..923345 Clostridium botulinum A str. ATCC 19397 5395024 YP_001383221.1 CDS CLB_0884 NC_009697.1 923664 924512 D identified by match to protein family HMM PF02567; match to protein family HMM TIGR00654; PhzF family phenazine biosynthesis protein 923664..924512 Clostridium botulinum A str. ATCC 19397 5395326 YP_001383222.1 CDS CLB_0885 NC_009697.1 925028 925822 R ABC transporter permease complement(925028..925822) Clostridium botulinum A str. ATCC 19397 5396474 YP_001383223.1 CDS CLB_0886 NC_009697.1 925841 926758 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(925841..926758) Clostridium botulinum A str. ATCC 19397 5397534 YP_001383224.1 CDS CLB_0887 NC_009697.1 926755 927876 R identified by match to protein family HMM PF01381; DNA-binding protein complement(926755..927876) Clostridium botulinum A str. ATCC 19397 5397762 YP_001383225.1 CDS CLB_0888 NC_009697.1 928527 928655 D hypothetical protein 928527..928655 Clostridium botulinum A str. ATCC 19397 5397712 YP_001383226.1 CDS CLB_0889 NC_009697.1 929340 930152 D identified by match to protein family HMM PF00561; non-heme haloperoxidase family protein 929340..930152 Clostridium botulinum A str. ATCC 19397 5396062 YP_001383227.1 CDS CLB_0890 NC_009697.1 930675 931250 D identified by match to protein family HMM PF00583; acetyltransferase 930675..931250 Clostridium botulinum A str. ATCC 19397 5395142 YP_001383228.1 CDS CLB_0891 NC_009697.1 931308 931961 D identified by match to protein family HMM PF00805; pentapeptide repeat-containing protein 931308..931961 Clostridium botulinum A str. ATCC 19397 5395711 YP_001383229.1 CDS CLB_0892 NC_009697.1 932231 932800 R identified by match to protein family HMM PF02525; flavodoxin-like fold domain-containing protein complement(932231..932800) Clostridium botulinum A str. ATCC 19397 5397745 YP_001383230.1 CDS CLB_0893 NC_009697.1 932818 933372 R identified by match to protein family HMM PF02525; match to protein family HMM PF03358; NADPH-dependent FMN reductase complement(932818..933372) Clostridium botulinum A str. ATCC 19397 5397828 YP_001383231.1 CDS CLB_0894 NC_009697.1 933477 933803 R identified by match to protein family HMM PF01022; ArsR family transcriptional regulator complement(933477..933803) Clostridium botulinum A str. ATCC 19397 5395450 YP_001383232.1 CDS CLB_0895 NC_009697.1 934147 934974 R identified by match to protein family HMM PF00376; MerR family transcriptional regulator complement(934147..934974) Clostridium botulinum A str. ATCC 19397 5395832 YP_001383233.1 CDS CLB_0896 NC_009697.1 935087 935704 D identified by match to protein family HMM PF00583; acetyltransferase 935087..935704 Clostridium botulinum A str. ATCC 19397 5395088 YP_001383234.1 CDS CLB_0897 NC_009697.1 935910 936425 D identified by match to protein family HMM PF04229; hypothetical protein 935910..936425 Clostridium botulinum A str. ATCC 19397 5394625 YP_001383235.1 CDS CLB_0898 NC_009697.1 936488 937012 D identified by match to protein family HMM PF00583; acetyltransferase 936488..937012 Clostridium botulinum A str. ATCC 19397 5397519 YP_001383236.1 CDS CLB_0899 NC_009697.1 937717 938418 R identified by match to protein family HMM PF02678; hypothetical protein complement(937717..938418) Clostridium botulinum A str. ATCC 19397 5397392 YP_001383237.1 CDS CLB_0900 NC_009697.1 938693 939001 R identified by match to protein family HMM PF01638; transcriptional regulator complement(938693..939001) Clostridium botulinum A str. ATCC 19397 5398161 YP_001383238.1 CDS CLB_0901 NC_009697.1 939130 939759 D identified by match to protein family HMM PF00881; nitroreductase family protein 939130..939759 Clostridium botulinum A str. ATCC 19397 5397754 YP_001383239.1 CDS CLB_0902 NC_009697.1 940123 941565 D lipase 940123..941565 Clostridium botulinum A str. ATCC 19397 5395737 YP_001383240.1 CDS oxdD NC_009697.1 941800 943008 R identified by match to protein family HMM PF00190; match to protein family HMM PF07883; oxalate decarboxylase complement(941800..943008) Clostridium botulinum A str. ATCC 19397 5396279 YP_001383241.1 CDS CLB_0904 NC_009697.1 943174 943752 R identified by match to protein family HMM PF03641; match to protein family HMM TIGR00730; decarboxylase family protein complement(943174..943752) Clostridium botulinum A str. ATCC 19397 5395067 YP_001383242.1 CDS CLB_0905 NC_009697.1 943810 944265 R identified by match to protein family HMM PF04657; hypothetical protein complement(943810..944265) Clostridium botulinum A str. ATCC 19397 5397297 YP_001383243.1 CDS CLB_0906 NC_009697.1 944379 945266 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 944379..945266 Clostridium botulinum A str. ATCC 19397 5396675 YP_001383244.1 CDS CLB_0907 NC_009697.1 945539 945985 D identified by match to protein family HMM PF00583; acetyltransferase 945539..945985 Clostridium botulinum A str. ATCC 19397 5397982 YP_001383245.1 CDS CLB_0909 NC_009697.1 946636 947046 R hypothetical protein complement(946636..947046) Clostridium botulinum A str. ATCC 19397 5398128 YP_001383246.1 CDS CLB_0910 NC_009697.1 947115 947489 D hypothetical protein 947115..947489 Clostridium botulinum A str. ATCC 19397 5396734 YP_001383247.1 CDS CLB_0911 NC_009697.1 947549 947971 R hypothetical protein complement(947549..947971) Clostridium botulinum A str. ATCC 19397 5396158 YP_001383248.1 CDS CLB_0912 NC_009697.1 948094 949026 D identified by match to protein family HMM PF08220; match to protein family HMM PF08279; hypothetical protein 948094..949026 Clostridium botulinum A str. ATCC 19397 5395843 YP_001383249.1 CDS CLB_0913 NC_009697.1 949234 949704 R hypothetical protein complement(949234..949704) Clostridium botulinum A str. ATCC 19397 5395286 YP_001383250.1 CDS CLB_0914 NC_009697.1 949704 950483 R hypothetical protein complement(949704..950483) Clostridium botulinum A str. ATCC 19397 5398136 YP_001383251.1 CDS CLB_0915 NC_009697.1 951146 951646 R identified by match to protein family HMM PF01327; peptide deformylase complement(951146..951646) Clostridium botulinum A str. ATCC 19397 5394922 YP_001383252.1 CDS CLB_0916 NC_009697.1 951879 953315 D identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator 951879..953315 Clostridium botulinum A str. ATCC 19397 5397708 YP_001383253.1 CDS CLB_0917 NC_009697.1 953393 953911 R identified by match to protein family HMM PF00881; nitroreductase family protein complement(953393..953911) Clostridium botulinum A str. ATCC 19397 5397429 YP_001383254.1 CDS CLB_0918 NC_009697.1 954154 954960 R identified by match to protein family HMM PF00037; (Fe-S)-binding protein complement(954154..954960) Clostridium botulinum A str. ATCC 19397 5395116 YP_001383255.1 CDS CLB_0919 NC_009697.1 955732 956565 D identified by match to protein family HMM PF00874; match to protein family HMM PF03123; transcription antiterminator 955732..956565 Clostridium botulinum A str. ATCC 19397 5396554 YP_001383256.1 CDS CLB_0920 NC_009697.1 956690 958579 D identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830; match to protein family HMM TIGR01995; PTS system beta-glucoside-specific transporter subunit IIABC 956690..958579 Clostridium botulinum A str. ATCC 19397 5395740 YP_001383257.1 CDS CLB_0921 NC_009697.1 958908 960329 D identified by match to protein family HMM PF00232; glycosyl hydrolase family protein 958908..960329 Clostridium botulinum A str. ATCC 19397 5394737 YP_001383258.1 CDS CLB_0922 NC_009697.1 960457 960663 D identified by Glimmer3; hypothetical protein 960457..960663 Clostridium botulinum A str. ATCC 19397 5396263 YP_001383259.1 CDS mraY-1 NC_009697.1 960865 961818 R identified by match to protein family HMM PF00953; match to protein family HMM TIGR00445; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(960865..961818) Clostridium botulinum A str. ATCC 19397 5398046 YP_001383260.1 CDS CLB_0924 NC_009697.1 962231 963091 D identified by match to protein family HMM PF01381; DNA-binding protein 962231..963091 Clostridium botulinum A str. ATCC 19397 5397837 YP_001383261.1 CDS CLB_0925 NC_009697.1 963515 963949 D chloramphenicol O-acetyltransferase 963515..963949 Clostridium botulinum A str. ATCC 19397 5394772 YP_001383262.1 CDS CLB_0927 NC_009697.1 964926 965549 D identified by match to protein family HMM PF06555; hypothetical protein 964926..965549 Clostridium botulinum A str. ATCC 19397 5398150 YP_001383263.1 CDS CLB_0928 NC_009697.1 966151 967950 R identified by match to protein family HMM PF00394; match to protein family HMM PF07731; multicopper oxidase family protein complement(966151..967950) Clostridium botulinum A str. ATCC 19397 5397347 YP_001383264.1 CDS CLB_0929 NC_009697.1 968114 968293 D hypothetical protein 968114..968293 Clostridium botulinum A str. ATCC 19397 5395400 YP_001383265.1 CDS CLB_0930 NC_009697.1 968535 968924 R hypothetical protein complement(968535..968924) Clostridium botulinum A str. ATCC 19397 5394910 YP_001383266.1 CDS CLB_0931 NC_009697.1 969334 969528 D identified by similarity to GB:ABL83831.1; hypothetical protein 969334..969528 Clostridium botulinum A str. ATCC 19397 5394751 YP_001383267.1 CDS CLB_0932 NC_009697.1 970205 971437 R identified by match to protein family HMM PF04371; peptidyl-arginine deiminase complement(970205..971437) Clostridium botulinum A str. ATCC 19397 5397008 YP_001383268.1 CDS CLB_0934 NC_009697.1 972372 973235 D identified by match to protein family HMM PF00892; DMT family permease 972372..973235 Clostridium botulinum A str. ATCC 19397 5396362 YP_001383269.1 CDS CLB_0935 NC_009697.1 973591 974178 D identified by match to protein family HMM PF04229; hypothetical protein 973591..974178 Clostridium botulinum A str. ATCC 19397 5397478 YP_001383270.1 CDS CLB_0936 NC_009697.1 974259 974636 R identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein complement(974259..974636) Clostridium botulinum A str. ATCC 19397 5397665 YP_001383271.1 CDS CLB_0937 NC_009697.1 974810 975139 R identified by Glimmer3; hypothetical protein complement(974810..975139) Clostridium botulinum A str. ATCC 19397 5394815 YP_001383272.1 CDS CLB_0938 NC_009697.1 975403 975711 R hypothetical protein complement(975403..975711) Clostridium botulinum A str. ATCC 19397 5394846 YP_001383273.1 CDS CLB_0939 NC_009697.1 975817 976026 R identified by Glimmer3; hypothetical protein complement(975817..976026) Clostridium botulinum A str. ATCC 19397 5396402 YP_001383274.1 CDS CLB_0940 NC_009697.1 976392 977162 D identified by Glimmer3; hypothetical protein 976392..977162 Clostridium botulinum A str. ATCC 19397 5395454 YP_001383275.1 CDS CLB_0941 NC_009697.1 977701 979308 D hypothetical protein 977701..979308 Clostridium botulinum A str. ATCC 19397 5396806 YP_001383276.1 CDS CLB_0942 NC_009697.1 979357 979488 R identified by Glimmer3; hypothetical protein complement(979357..979488) Clostridium botulinum A str. ATCC 19397 5397734 YP_001383277.1 CDS CLB_0943 NC_009697.1 979672 982032 R identified by match to protein family HMM PF00005; match to protein family HMM PF02687; ABC transporter ATP-binding protein/permease complement(979672..982032) Clostridium botulinum A str. ATCC 19397 5396447 YP_001383278.1 CDS CLB_0944 NC_009697.1 982192 982863 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 982192..982863 Clostridium botulinum A str. ATCC 19397 5395986 YP_001383279.1 CDS CLB_0945 NC_009697.1 982863 983891 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 982863..983891 Clostridium botulinum A str. ATCC 19397 5397494 YP_001383280.1 CDS CLB_0946 NC_009697.1 984243 984791 D identified by match to protein family HMM PF02632; BioY family protein 984243..984791 Clostridium botulinum A str. ATCC 19397 5397400 YP_001383281.1 CDS CLB_0947 NC_009697.1 985196 986902 D identified by Glimmer3; hypothetical protein 985196..986902 Clostridium botulinum A str. ATCC 19397 5397909 YP_001383282.1 CDS CLB_0948 NC_009697.1 987244 987789 D identified by match to protein family HMM PF00583; acetyltransferase 987244..987789 Clostridium botulinum A str. ATCC 19397 5396317 YP_001383283.1 CDS CLB_0949 NC_009697.1 987868 989475 D identified by match to protein family HMM PF00717; match to protein family HMM TIGR00498; LexA repressor 987868..989475 Clostridium botulinum A str. ATCC 19397 5396277 YP_001383284.1 CDS cobU NC_009697.1 989753 990310 D catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 989753..990310 Clostridium botulinum A str. ATCC 19397 5395576 YP_001383285.1 CDS tipA NC_009697.1 990732 991496 R identified by match to protein family HMM PF00376; match to protein family HMM PF07739; transcriptional activator TipA complement(990732..991496) Clostridium botulinum A str. ATCC 19397 5395538 YP_001383286.1 CDS CLB_0952 NC_009697.1 991893 992024 R identified by Glimmer3; hypothetical protein complement(991893..992024) Clostridium botulinum A str. ATCC 19397 5395593 YP_001383287.1 CDS CLB_0953 NC_009697.1 992016 992141 D identified by Glimmer3; hypothetical protein 992016..992141 Clostridium botulinum A str. ATCC 19397 5394640 YP_001383288.1 CDS cobQ NC_009697.1 992202 993683 D catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 992202..993683 Clostridium botulinum A str. ATCC 19397 5395718 YP_001383289.1 CDS cobD NC_009697.1 993685 994647 D CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 993685..994647 Clostridium botulinum A str. ATCC 19397 5395360 YP_001383290.1 CDS CLB_0956 NC_009697.1 994866 995954 D identified by match to protein family HMM PF00155; aminotransferase family protein 994866..995954 Clostridium botulinum A str. ATCC 19397 5394545 YP_001383291.1 CDS cbiM NC_009697.1 996228 996947 D catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM 996228..996947 Clostridium botulinum A str. ATCC 19397 5394844 YP_001383292.1 CDS cbiN NC_009697.1 996951 997250 D identified by match to protein family HMM PF02553; match to protein family HMM TIGR01165; cobalt transport protein 996951..997250 Clostridium botulinum A str. ATCC 19397 5397615 YP_001383293.1 CDS cbiQ NC_009697.1 997366 997911 D cobalt ABC transporter permease CbiQ 997366..997911 Clostridium botulinum A str. ATCC 19397 5397825 YP_001383294.1 CDS CLB_0960 NC_009697.1 998335 998982 D catalyzes the formation of siroheme from precorrin-2; precorrin-2 dehydrogenase 998335..998982 Clostridium botulinum A str. ATCC 19397 5398122 YP_001383295.1 CDS hemC NC_009697.1 998951 999823 D transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 998951..999823 Clostridium botulinum A str. ATCC 19397 5397822 YP_001383296.1 CDS cobA/hemD NC_009697.1 999959 1001419 D identified by match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01469; uroporphyrinogen III synthase/methyltransferase 999959..1001419 Clostridium botulinum A str. ATCC 19397 5397234 YP_001383297.1 CDS CLB_0963 NC_009697.1 1001564 1001746 D hypothetical protein 1001564..1001746 Clostridium botulinum A str. ATCC 19397 5397367 YP_001383298.1 CDS hemB NC_009697.1 1002008 1002982 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1002008..1002982 Clostridium botulinum A str. ATCC 19397 5397049 YP_001383299.1 CDS cobB NC_009697.1 1003117 1004439 D responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 1003117..1004439 Clostridium botulinum A str. ATCC 19397 5396114 YP_001383300.1 CDS cbiC NC_009697.1 1004464 1005090 D catalyzes the interconversion of precorrin-8X and cobyrinic acid; precorrin-8X methylmutase 1004464..1005090 Clostridium botulinum A str. ATCC 19397 5396753 YP_001383301.1 CDS CLB_0967 NC_009697.1 1005284 1006126 D identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein 1005284..1006126 Clostridium botulinum A str. ATCC 19397 5396879 YP_001383302.1 CDS CLB_0968 NC_009697.1 1006302 1007045 D hypothetical protein 1006302..1007045 Clostridium botulinum A str. ATCC 19397 5397193 YP_001383303.1 CDS CLB_0969 NC_009697.1 1007351 1007959 D identified by match to protein family HMM PF01966; HD domain-containing protein 1007351..1007959 Clostridium botulinum A str. ATCC 19397 5398000 YP_001383304.1 CDS CLB_0970 NC_009697.1 1008015 1008383 D hypothetical protein 1008015..1008383 Clostridium botulinum A str. ATCC 19397 5394656 YP_001383305.1 CDS CLB_0971 NC_009697.1 1008505 1009779 D identified by Glimmer3; hypothetical protein 1008505..1009779 Clostridium botulinum A str. ATCC 19397 5396477 YP_001383306.1 CDS CLB_0972 NC_009697.1 1009856 1010284 D identified by match to protein family HMM PF00583; acetyltransferase 1009856..1010284 Clostridium botulinum A str. ATCC 19397 5398049 YP_001383307.1 CDS CLB_0973 NC_009697.1 1010535 1011236 D identified by match to protein family HMM PF02661; Fic family protein 1010535..1011236 Clostridium botulinum A str. ATCC 19397 5396095 YP_001383308.1 CDS CLB_0974 NC_009697.1 1011266 1011787 D identified by match to protein family HMM PF00881; nitroreductase family protein 1011266..1011787 Clostridium botulinum A str. ATCC 19397 5397992 YP_001383309.1 CDS CLB_0975 NC_009697.1 1011854 1012150 D identified by Glimmer3; hypothetical protein 1011854..1012150 Clostridium botulinum A str. ATCC 19397 5397775 YP_001383310.1 CDS CLB_0976 NC_009697.1 1012258 1012791 D identified by match to protein family HMM PF04229; hypothetical protein 1012258..1012791 Clostridium botulinum A str. ATCC 19397 5396902 YP_001383311.1 CDS cbiD NC_009697.1 1012865 1013944 D Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase 1012865..1013944 Clostridium botulinum A str. ATCC 19397 5395658 YP_001383312.1 CDS cbiE NC_009697.1 1014121 1014771 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR02467; precorrin-6y C5,15-methyltransferase subunit CbiE 1014121..1014771 Clostridium botulinum A str. ATCC 19397 5396387 YP_001383313.1 CDS CLB_0979 NC_009697.1 1014998 1015501 D identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein 1014998..1015501 Clostridium botulinum A str. ATCC 19397 5396245 YP_001383314.1 CDS cbiT NC_009697.1 1015694 1016269 D identified by match to protein family HMM TIGR02469; precorrin-6Y C5,15-methyltransferase subunit CbiT 1015694..1016269 Clostridium botulinum A str. ATCC 19397 5394902 YP_001383315.1 CDS CLB_0981 NC_009697.1 1016269 1016700 D hypothetical protein 1016269..1016700 Clostridium botulinum A str. ATCC 19397 5395026 YP_001383316.1 CDS CLB_0982 NC_009697.1 1016736 1017287 D hypothetical protein 1016736..1017287 Clostridium botulinum A str. ATCC 19397 5396215 YP_001383317.1 CDS CLB_0983 NC_009697.1 1017451 1017600 R identified by Glimmer3; hypothetical protein complement(1017451..1017600) Clostridium botulinum A str. ATCC 19397 5395279 YP_001383318.1 CDS CLB_0984 NC_009697.1 1017785 1017976 D identified by Glimmer3; hypothetical protein 1017785..1017976 Clostridium botulinum A str. ATCC 19397 5396363 YP_001383319.1 CDS CLB_0985 NC_009697.1 1018019 1018471 D hypothetical protein 1018019..1018471 Clostridium botulinum A str. ATCC 19397 5396981 YP_001383320.1 CDS CLB_0986 NC_009697.1 1018531 1018872 D hypothetical protein 1018531..1018872 Clostridium botulinum A str. ATCC 19397 5396718 YP_001383321.1 CDS CLB_0987 NC_009697.1 1018992 1019531 D identified by match to protein family HMM PF00857; isochorismatase family protein 1018992..1019531 Clostridium botulinum A str. ATCC 19397 5396389 YP_001383322.1 CDS cobI NC_009697.1 1019826 1020542 D catalyzes the formation of precorrin-3A from precorrin-2; cobalt-precorrin-2 C(20)-methyltransferase 1019826..1020542 Clostridium botulinum A str. ATCC 19397 5396027 YP_001383323.1 CDS cobM NC_009697.1 1020561 1021325 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR01465; precorrin-4 C(11)-methyltransferase 1020561..1021325 Clostridium botulinum A str. ATCC 19397 5395322 YP_001383324.1 CDS cbiG NC_009697.1 1021616 1022668 D identified by match to protein family HMM PF01890; cobalamin biosynthesis protein CbiG 1021616..1022668 Clostridium botulinum A str. ATCC 19397 5394998 YP_001383325.1 CDS cobJ NC_009697.1 1022826 1023557 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR01466; precorrin-3B C(17)-methyltransferase 1022826..1023557 Clostridium botulinum A str. ATCC 19397 5397729 YP_001383326.1 CDS cobK NC_009697.1 1023691 1024458 D CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase 1023691..1024458 Clostridium botulinum A str. ATCC 19397 5397344 YP_001383327.1 CDS CLB_0993 NC_009697.1 1024538 1025026 D hypothetical protein 1024538..1025026 Clostridium botulinum A str. ATCC 19397 5397801 YP_001383328.1 CDS cbiK NC_009697.1 1025202 1025984 D identified by match to protein family HMM PF01903; match to protein family HMM PF06180; anaerobic sirohydrochlorin cobaltochelatase 1025202..1025984 Clostridium botulinum A str. ATCC 19397 5396247 YP_001383329.1 CDS CLB_0995 NC_009697.1 1025997 1026836 D identified by match to protein family HMM PF00288; kinase 1025997..1026836 Clostridium botulinum A str. ATCC 19397 5395113 YP_001383330.1 CDS cobO NC_009697.1 1026984 1027505 D catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase 1026984..1027505 Clostridium botulinum A str. ATCC 19397 5394936 YP_001383331.1 CDS CLB_0997 NC_009697.1 1027758 1028447 D identified by match to protein family HMM PF00027; match to protein family HMM PF00325; Crp/FNR family transcriptional regulator 1027758..1028447 Clostridium botulinum A str. ATCC 19397 5396482 YP_001383332.1 CDS CLB_0998 NC_009697.1 1028537 1029301 D identified by match to protein family HMM PF01226; formate/nitrite transporter family protein 1028537..1029301 Clostridium botulinum A str. ATCC 19397 5395896 YP_001383333.1 CDS asrA NC_009697.1 1029321 1030349 D identified by match to protein family HMM PF00037; match to protein family HMM TIGR02910; anaerobic sulfite reductase subunit A 1029321..1030349 Clostridium botulinum A str. ATCC 19397 5394932 YP_001383334.1 CDS asrB NC_009697.1 1030336 1031133 D with AsrAC catalyzes the reduction of sulfite to hydrogen sulfide; anaerobic sulfite reductase subunit B 1030336..1031133 Clostridium botulinum A str. ATCC 19397 5397057 YP_001383335.1 CDS arsC NC_009697.1 1031146 1032111 D identified by match to protein family HMM PF00037; match to protein family HMM PF01077; match to protein family HMM PF03460; match to protein family HMM TIGR02912; anaerobic sulfite reductase subunit C 1031146..1032111 Clostridium botulinum A str. ATCC 19397 5395477 YP_001383336.1 CDS CLB_1002 NC_009697.1 1032465 1033487 D identified by match to protein family HMM PF00994; molybdopterin binding protein 1032465..1033487 Clostridium botulinum A str. ATCC 19397 5398222 YP_001383337.1 CDS CLB_1003 NC_009697.1 1033799 1034599 D identified by match to protein family HMM PF01547; match to protein family HMM TIGR01256; anion ABC transporter solute-binding protein 1033799..1034599 Clostridium botulinum A str. ATCC 19397 5394877 YP_001383338.1 CDS CLB_1004 NC_009697.1 1034619 1035401 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR01581; anion ABC transporter permease 1034619..1035401 Clostridium botulinum A str. ATCC 19397 5396198 YP_001383339.1 CDS CLB_1005 NC_009697.1 1035416 1036114 D identified by match to protein family HMM PF00005; anion ABC transporter ATP-binding protein 1035416..1036114 Clostridium botulinum A str. ATCC 19397 5397970 YP_001383340.1 CDS CLB_1006 NC_009697.1 1036098 1036826 D hypothetical protein 1036098..1036826 Clostridium botulinum A str. ATCC 19397 5397804 YP_001383341.1 CDS CLB_1007 NC_009697.1 1037657 1038676 D hypothetical protein 1037657..1038676 Clostridium botulinum A str. ATCC 19397 5398211 YP_001383342.1 CDS CLB_1008 NC_009697.1 1038697 1039584 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1038697..1039584 Clostridium botulinum A str. ATCC 19397 5397852 YP_001383343.1 CDS CLB_1009 NC_009697.1 1039588 1040364 D hypothetical protein 1039588..1040364 Clostridium botulinum A str. ATCC 19397 5397496 YP_001383344.1 CDS CLB_1010 NC_009697.1 1041009 1041731 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1041009..1041731 Clostridium botulinum A str. ATCC 19397 5395397 YP_001383345.1 CDS CLB_1011 NC_009697.1 1041721 1043142 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 1041721..1043142 Clostridium botulinum A str. ATCC 19397 5396053 YP_001383346.1 CDS CLB_1012 NC_009697.1 1043520 1044290 R identified by match to protein family HMM PF00005; iron ABC transporter ATP-binding protein complement(1043520..1044290) Clostridium botulinum A str. ATCC 19397 5395707 YP_001383347.1 CDS CLB_1013 NC_009697.1 1044291 1045358 R identified by match to protein family HMM PF00950; match to protein family HMM PF01032; iron ABC transporter permease complement(1044291..1045358) Clostridium botulinum A str. ATCC 19397 5395191 YP_001383348.1 CDS CLB_1014 NC_009697.1 1045371 1046393 R identified by match to protein family HMM PF01497; iron chelate uptake ABC transporter solute-binding protein complement(1045371..1046393) Clostridium botulinum A str. ATCC 19397 5398058 YP_001383349.1 CDS dhaKL NC_009697.1 1046951 1048711 R in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone; dihydroxyacetone kinase complement(1046951..1048711) Clostridium botulinum A str. ATCC 19397 5397225 YP_001383350.1 CDS gldA NC_009697.1 1048722 1049852 R forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; glycerol dehydrogenase complement(1048722..1049852) Clostridium botulinum A str. ATCC 19397 5398125 YP_001383351.1 CDS CLB_1017 NC_009697.1 1050164 1051201 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(1050164..1051201) Clostridium botulinum A str. ATCC 19397 5395638 YP_001383352.1 CDS CLB_1018 NC_009697.1 1051579 1051755 D hypothetical protein 1051579..1051755 Clostridium botulinum A str. ATCC 19397 5395860 YP_001383353.1 CDS CLB_1019 NC_009697.1 1051790 1052254 D identified by match to protein family HMM PF00583; acetyltransferase 1051790..1052254 Clostridium botulinum A str. ATCC 19397 5396154 YP_001383354.1 CDS CLB_1020 NC_009697.1 1052281 1052724 D identified by match to protein family HMM PF00583; acetyltransferase 1052281..1052724 Clostridium botulinum A str. ATCC 19397 5397947 YP_001383355.1 CDS CLB_1021 NC_009697.1 1052877 1053470 D identified by match to protein family HMM PF07081; hypothetical protein 1052877..1053470 Clostridium botulinum A str. ATCC 19397 5396193 YP_001383356.1 CDS CLB_1022 NC_009697.1 1053533 1053736 D identified by Glimmer3; hypothetical protein 1053533..1053736 Clostridium botulinum A str. ATCC 19397 5395430 YP_001383357.1 CDS CLB_1023 NC_009697.1 1053854 1054699 D identified by match to protein family HMM PF00248; aldo/keto reductase 1053854..1054699 Clostridium botulinum A str. ATCC 19397 5394868 YP_001383358.1 CDS CLB_1024 NC_009697.1 1054800 1055123 D identified by match to protein family HMM PF04993; TfoX domain-containing protein 1054800..1055123 Clostridium botulinum A str. ATCC 19397 5395126 YP_001383359.1 CDS CLB_1025 NC_009697.1 1055169 1056023 D identified by match to protein family HMM PF00583; acetyltransferase 1055169..1056023 Clostridium botulinum A str. ATCC 19397 5395139 YP_001383360.1 CDS CLB_1026 NC_009697.1 1056233 1056547 D identified by match to protein family HMM PF03551; PadR family transcriptional regulator 1056233..1056547 Clostridium botulinum A str. ATCC 19397 5396585 YP_001383361.1 CDS CLB_1027 NC_009697.1 1056564 1057184 D hypothetical protein 1056564..1057184 Clostridium botulinum A str. ATCC 19397 5395966 YP_001383362.1 CDS CLB_1028 NC_009697.1 1057319 1057813 D hypothetical protein 1057319..1057813 Clostridium botulinum A str. ATCC 19397 5396160 YP_001383363.1 CDS CLB_1029 NC_009697.1 1057876 1057992 D identified by Glimmer3; hypothetical protein 1057876..1057992 Clostridium botulinum A str. ATCC 19397 5394872 YP_001383364.1 CDS add NC_009697.1 1058446 1059453 R catalyzes the formation of inosine from adenosine; adenosine deaminase complement(1058446..1059453) Clostridium botulinum A str. ATCC 19397 5397081 YP_001383365.1 CDS CLB_1031 NC_009697.1 1060357 1062525 D identified by match to protein family HMM TIGR03061; match to protein family HMM TIGR03062; phage infection protein 1060357..1062525 Clostridium botulinum A str. ATCC 19397 5397770 YP_001383366.1 CDS CLB_1032 NC_009697.1 1062551 1064710 D identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062; phage infection protein 1062551..1064710 Clostridium botulinum A str. ATCC 19397 5394964 YP_001383367.1 CDS CLB_1033 NC_009697.1 1065071 1065373 R hypothetical protein complement(1065071..1065373) Clostridium botulinum A str. ATCC 19397 5398028 YP_001383368.1 CDS CLB_1034 NC_009697.1 1065564 1066319 D hypothetical protein 1065564..1066319 Clostridium botulinum A str. ATCC 19397 5396639 YP_001383369.1 CDS recQ NC_009697.1 1066563 1068692 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389; ATP-dependent DNA helicase RecQ 1066563..1068692 Clostridium botulinum A str. ATCC 19397 5397621 YP_001383370.1 CDS CLB_1036 NC_009697.1 1068864 1069295 D identified by match to protein family HMM PF02915; ferritin-like diiron domain-containing protein 1068864..1069295 Clostridium botulinum A str. ATCC 19397 5395806 YP_001383371.1 CDS CLB_1037 NC_009697.1 1069578 1070123 R identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040; phosphodiesterase complement(1069578..1070123) Clostridium botulinum A str. ATCC 19397 5396496 YP_001383372.1 CDS CLB_1038 NC_009697.1 1070760 1071143 D identified by match to protein family HMM PF00072; response regulator 1070760..1071143 Clostridium botulinum A str. ATCC 19397 5396827 YP_001383373.1 CDS CLB_1039 NC_009697.1 1071303 1073732 D identified by match to protein family HMM PF07656; hypothetical protein 1071303..1073732 Clostridium botulinum A str. ATCC 19397 5396990 YP_001383374.1 CDS CLB_1040 NC_009697.1 1074179 1074394 D identified by Glimmer3; hypothetical protein 1074179..1074394 Clostridium botulinum A str. ATCC 19397 5395823 YP_001383375.1 CDS CLB_1041 NC_009697.1 1074396 1075214 D hypothetical protein 1074396..1075214 Clostridium botulinum A str. ATCC 19397 5394620 YP_001383376.1 CDS CLB_1042 NC_009697.1 1075214 1075807 D identified by match to protein family HMM PF04055; anaerobic ribonucleoside-triphosphate reductase activating protein 1075214..1075807 Clostridium botulinum A str. ATCC 19397 5395253 YP_001383377.1 CDS CLB_1043 NC_009697.1 1075821 1077494 D identified by match to protein family HMM PF00004; ATPase AAA 1075821..1077494 Clostridium botulinum A str. ATCC 19397 5397639 YP_001383378.1 CDS CLB_1044 NC_009697.1 1077509 1078279 D identified by Glimmer3; hypothetical protein 1077509..1078279 Clostridium botulinum A str. ATCC 19397 5396644 YP_001383379.1 CDS lctP NC_009697.1 1078763 1080286 D identified by match to protein family HMM PF02652; match to protein family HMM PF03553; match to protein family HMM TIGR00795; L-lactate permease 1078763..1080286 Clostridium botulinum A str. ATCC 19397 5397187 YP_001383380.1 CDS CLB_1046 NC_009697.1 1080315 1081589 D hypothetical protein 1080315..1081589 Clostridium botulinum A str. ATCC 19397 5395858 YP_001383381.1 CDS CLB_1047 NC_009697.1 1081632 1082420 D identified by match to protein family HMM PF01012; electron transfer flavoprotein subunit beta/FixA family protein 1081632..1082420 Clostridium botulinum A str. ATCC 19397 5396423 YP_001383382.1 CDS CLB_1048 NC_009697.1 1082452 1083654 D identified by match to protein family HMM PF00766; match to protein family HMM PF01012; electron transfer flavoprotein subunit alpha/FixB family protein 1082452..1083654 Clostridium botulinum A str. ATCC 19397 5395791 YP_001383383.1 CDS CLB_1049 NC_009697.1 1083715 1085112 D identified by match to protein family HMM PF01565; match to protein family HMM PF02913; glycolate oxidase 1083715..1085112 Clostridium botulinum A str. ATCC 19397 5396360 YP_001383384.1 CDS CLB_1050 NC_009697.1 1085381 1085503 D identified by similarity to GB:CAK20204.1; hypothetical protein 1085381..1085503 Clostridium botulinum A str. ATCC 19397 5396917 YP_001383385.1 CDS CLB_1051 NC_009697.1 1085631 1086539 D lipoprotein 1085631..1086539 Clostridium botulinum A str. ATCC 19397 5395639 YP_001383386.1 CDS CLB_1052 NC_009697.1 1086735 1087205 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1086735..1087205 Clostridium botulinum A str. ATCC 19397 5397854 YP_001383387.1 CDS CLB_1053 NC_009697.1 1087207 1087752 D identified by match to protein family HMM PF04199; cyclase 1087207..1087752 Clostridium botulinum A str. ATCC 19397 5395378 YP_001383388.1 CDS CLB_1054 NC_009697.1 1088053 1089237 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(1088053..1089237) Clostridium botulinum A str. ATCC 19397 5394939 YP_001383389.1 CDS CLB_1055 NC_009697.1 1090166 1090744 R identified by match to protein family HMM PF04199; cyclase complement(1090166..1090744) Clostridium botulinum A str. ATCC 19397 5394888 YP_001383390.1 CDS CLB_1056 NC_009697.1 1090903 1091427 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1090903..1091427 Clostridium botulinum A str. ATCC 19397 5395594 YP_001383391.1 CDS CLB_1057 NC_009697.1 1091730 1092551 D identified by match to protein family HMM PF00376; match to protein family HMM PF06445; MerR family transcriptional regulator 1091730..1092551 Clostridium botulinum A str. ATCC 19397 5395059 YP_001383392.1 CDS CLB_1058 NC_009697.1 1092766 1093464 D identified by match to protein family HMM PF03483; B3/4 domain-containing protein 1092766..1093464 Clostridium botulinum A str. ATCC 19397 5397311 YP_001383393.1 CDS aspC NC_009697.1 1093729 1095018 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(1093729..1095018) Clostridium botulinum A str. ATCC 19397 5395442 YP_001383394.1 CDS CLB_1060 NC_009697.1 1095563 1095943 D hypothetical protein 1095563..1095943 Clostridium botulinum A str. ATCC 19397 5396540 YP_001383395.1 CDS CLB_1061 NC_009697.1 1096103 1096717 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1096103..1096717 Clostridium botulinum A str. ATCC 19397 5395475 YP_001383396.1 CDS CLB_1062 NC_009697.1 1096733 1097221 D hypothetical protein 1096733..1097221 Clostridium botulinum A str. ATCC 19397 5397622 YP_001383397.1 CDS CLB_1063 NC_009697.1 1097328 1098017 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549; match to protein family HMM TIGR02254; HAD family hydrolase complement(1097328..1098017) Clostridium botulinum A str. ATCC 19397 5394778 YP_001383398.1 CDS CLB_1064 NC_009697.1 1098328 1099017 D identified by match to protein family HMM PF00027; cyclic nucleotide-binding domain-containing protein 1098328..1099017 Clostridium botulinum A str. ATCC 19397 5395626 YP_001383399.1 CDS CLB_1065 NC_009697.1 1099135 1099719 R identified by match to protein family HMM PF01965; DJ-1/PfpI family protein complement(1099135..1099719) Clostridium botulinum A str. ATCC 19397 5397309 YP_001383400.1 CDS CLB_1066 NC_009697.1 1099875 1100768 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 1099875..1100768 Clostridium botulinum A str. ATCC 19397 5395473 YP_001383401.1 CDS CLB_1067 NC_009697.1 1100902 1101660 D hypothetical protein 1100902..1101660 Clostridium botulinum A str. ATCC 19397 5396085 YP_001383402.1 CDS feoB-2 NC_009697.1 1102693 1104849 D identified by match to protein family HMM PF01926; match to protein family HMM PF02421; match to protein family HMM PF07664; match to protein family HMM PF07670; match to protein family HMM TIGR00231; match to protein family HMM TIGR00437; ferrous iron transport protein B 1102693..1104849 Clostridium botulinum A str. ATCC 19397 5397988 YP_001383403.1 CDS CLB_1071 NC_009697.1 1104870 1105016 D identified by Glimmer3; hypothetical protein 1104870..1105016 Clostridium botulinum A str. ATCC 19397 5395903 YP_001383404.1 CDS CLB_1072 NC_009697.1 1105411 1105848 R identified by match to protein family HMM PF00583; acetyltransferase complement(1105411..1105848) Clostridium botulinum A str. ATCC 19397 5396528 YP_001383405.1 CDS CLB_1073 NC_009697.1 1106315 1107115 D identified by match to protein family HMM PF02557; D-alanyl-D-alanine carboxypeptidase 1106315..1107115 Clostridium botulinum A str. ATCC 19397 5396342 YP_001383406.1 CDS tlp NC_009697.1 1107414 1107641 D identified by match to protein family HMM TIGR03090; small acid-soluble spore protein Tlp 1107414..1107641 Clostridium botulinum A str. ATCC 19397 5396744 YP_001383407.1 CDS CLB_1075 NC_009697.1 1107859 1108545 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1107859..1108545 Clostridium botulinum A str. ATCC 19397 5398076 YP_001383408.1 CDS CLB_1076 NC_009697.1 1108546 1109901 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 1108546..1109901 Clostridium botulinum A str. ATCC 19397 5397766 YP_001383409.1 CDS CLB_1077 NC_009697.1 1110005 1110139 D identified by Glimmer3; hypothetical protein 1110005..1110139 Clostridium botulinum A str. ATCC 19397 5395348 YP_001383410.1 CDS CLB_1078 NC_009697.1 1110436 1111695 D identified by match to protein family HMM PF00067; cytochrome P450 1110436..1111695 Clostridium botulinum A str. ATCC 19397 5397857 YP_001383411.1 CDS CLB_1079 NC_009697.1 1111835 1113643 R identified by match to protein family HMM PF00403; heavy metal-binding domain-containing protein complement(1111835..1113643) Clostridium botulinum A str. ATCC 19397 5397563 YP_001383412.1 CDS CLB_1080 NC_009697.1 1114180 1114416 D hypothetical protein 1114180..1114416 Clostridium botulinum A str. ATCC 19397 5396714 YP_001383413.1 CDS CLB_1081 NC_009697.1 1114686 1115387 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1114686..1115387 Clostridium botulinum A str. ATCC 19397 5396846 YP_001383414.1 CDS CLB_1082 NC_009697.1 1115387 1116793 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 1115387..1116793 Clostridium botulinum A str. ATCC 19397 5397376 YP_001383415.1 CDS CLB_1083 NC_009697.1 1117133 1117819 R hypothetical protein complement(1117133..1117819) Clostridium botulinum A str. ATCC 19397 5397035 YP_001383416.1 CDS CLB_1084 NC_009697.1 1118055 1118813 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(1118055..1118813) Clostridium botulinum A str. ATCC 19397 5395309 YP_001383417.1 CDS CLB_1085 NC_009697.1 1119059 1120012 D identified by match to protein family HMM PF01032; iron ABC transporter permease 1119059..1120012 Clostridium botulinum A str. ATCC 19397 5394632 YP_001383418.1 CDS CLB_1086 NC_009697.1 1120002 1120952 D identified by match to protein family HMM PF01032; iron ABC transporter permease 1120002..1120952 Clostridium botulinum A str. ATCC 19397 5398189 YP_001383419.1 CDS CLB_1087 NC_009697.1 1120949 1121704 D identified by match to protein family HMM PF00005; iron ABC transporter ATP-binding protein 1120949..1121704 Clostridium botulinum A str. ATCC 19397 5397154 YP_001383420.1 CDS CLB_1088 NC_009697.1 1121778 1122722 D identified by match to protein family HMM PF01497; iron ABC transporter substrate-binding protein 1121778..1122722 Clostridium botulinum A str. ATCC 19397 5396861 YP_001383421.1 CDS CLB_1089 NC_009697.1 1122924 1123925 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 1122924..1123925 Clostridium botulinum A str. ATCC 19397 5398062 YP_001383422.1 CDS CLB_1090 NC_009697.1 1124440 1126242 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 1124440..1126242 Clostridium botulinum A str. ATCC 19397 5397486 YP_001383423.1 CDS CLB_1091 NC_009697.1 1126244 1127959 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF02463; ABC transporter ATP-binding protein/permease 1126244..1127959 Clostridium botulinum A str. ATCC 19397 5395460 YP_001383424.1 CDS CLB_1092 NC_009697.1 1128164 1129537 R sensor histidine kinase complement(1128164..1129537) Clostridium botulinum A str. ATCC 19397 5397617 YP_001383425.1 CDS CLB_1093 NC_009697.1 1129540 1130247 R identified by match to protein family HMM PF00072; match to protein family HMM PF04397; DNA-binding response regulator complement(1129540..1130247) Clostridium botulinum A str. ATCC 19397 5397673 YP_001383426.1 CDS CLB_1094 NC_009697.1 1130335 1131210 R hypothetical protein complement(1130335..1131210) Clostridium botulinum A str. ATCC 19397 5394847 YP_001383427.1 CDS CLB_1095 NC_009697.1 1131449 1131880 R identified by match to protein family HMM PF00534; glycoside hydrolase family protein complement(1131449..1131880) Clostridium botulinum A str. ATCC 19397 5396111 YP_001383428.1 CDS CLB_1096 NC_009697.1 1132303 1135464 D identified by match to protein family HMM PF01345; match to protein family HMM TIGR01451; BNR/Asp-box repeat-containing protein 1132303..1135464 Clostridium botulinum A str. ATCC 19397 5396722 YP_001383429.1 CDS CLB_1097 NC_009697.1 1135652 1137151 D identified by match to protein family HMM PF00041; match to protein family HMM PF00704; match to protein family HMM PF02839; extracellular exochitinase 1135652..1137151 Clostridium botulinum A str. ATCC 19397 5395412 YP_001383430.1 CDS CLB_1098 NC_009697.1 1137332 1137481 D identified by Glimmer3; hypothetical protein 1137332..1137481 Clostridium botulinum A str. ATCC 19397 5395213 YP_001383431.1 CDS CLB_1099 NC_009697.1 1137478 1139520 D identified by match to protein family HMM PF03190; hypothetical protein 1137478..1139520 Clostridium botulinum A str. ATCC 19397 5397390 YP_001383432.1 CDS CLB_1100 NC_009697.1 1139844 1140839 D identified by match to protein family HMM PF06081; hypothetical protein 1139844..1140839 Clostridium botulinum A str. ATCC 19397 5395204 YP_001383433.1 CDS CLB_1101 NC_009697.1 1141004 1141588 D hypothetical protein 1141004..1141588 Clostridium botulinum A str. ATCC 19397 5395811 YP_001383434.1 CDS CLB_1102 NC_009697.1 1141901 1142602 R identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein complement(1141901..1142602) Clostridium botulinum A str. ATCC 19397 5395147 YP_001383435.1 CDS CLB_1103 NC_009697.1 1142718 1143524 R identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein complement(1142718..1143524) Clostridium botulinum A str. ATCC 19397 5396320 YP_001383436.1 CDS CLB_1104 NC_009697.1 1143908 1145827 R identified by match to protein family HMM PF00005; drug resistance ABC transporter ATP-binding protein complement(1143908..1145827) Clostridium botulinum A str. ATCC 19397 5397784 YP_001383437.1 CDS CLB_1105 NC_009697.1 1146465 1147679 D identified by match to protein family HMM PF07670; hypothetical protein 1146465..1147679 Clostridium botulinum A str. ATCC 19397 5398130 YP_001383438.1 CDS CLB_1106 NC_009697.1 1148054 1148404 D identified by match to protein family HMM PF03960; ArsC family protein 1148054..1148404 Clostridium botulinum A str. ATCC 19397 5395351 YP_001383439.1 CDS CLB_1107 NC_009697.1 1148622 1149515 D radical SAM domain-containing protein 1148622..1149515 Clostridium botulinum A str. ATCC 19397 5397810 YP_001383440.1 CDS CLB_1108 NC_009697.1 1149723 1151141 D identified by match to protein family HMM PF01266; match to protein family HMM PF04324; FAD-dependent oxidoreductase 1149723..1151141 Clostridium botulinum A str. ATCC 19397 5396401 YP_001383441.1 CDS CLB_1109 NC_009697.1 1151198 1152454 D identified by match to protein family HMM PF00070; match to protein family HMM PF00890; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase 1151198..1152454 Clostridium botulinum A str. ATCC 19397 5395331 YP_001383442.1 CDS CLB_1110 NC_009697.1 1152457 1152825 D identified by match to protein family HMM PF07892; hypothetical protein 1152457..1152825 Clostridium botulinum A str. ATCC 19397 5396835 YP_001383443.1 CDS glpT NC_009697.1 1152914 1154251 D identified by match to protein family HMM PF07690; match to protein family HMM TIGR00712; match to protein family HMM TIGR00881; glycerol-3-phosphate transporter 1152914..1154251 Clostridium botulinum A str. ATCC 19397 5397412 YP_001383444.1 CDS argS NC_009697.1 1154833 1156524 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1154833..1156524 Clostridium botulinum A str. ATCC 19397 5394617 YP_001383445.1 CDS CLB_1113 NC_009697.1 1156866 1156979 D identified by Glimmer3; hypothetical protein 1156866..1156979 Clostridium botulinum A str. ATCC 19397 5397243 YP_001383446.1 CDS CLB_1114 NC_009697.1 1156969 1158099 D associated with arginine deiminase pathway genes; probably functions in arginine catabolism; transaminase 1156969..1158099 Clostridium botulinum A str. ATCC 19397 5398158 YP_001383447.1 CDS CLB_1115 NC_009697.1 1158238 1158618 D identified by match to protein family HMM PF00571; hypothetical protein 1158238..1158618 Clostridium botulinum A str. ATCC 19397 5397736 YP_001383448.1 CDS CLB_1116 NC_009697.1 1158826 1158984 R identified by Glimmer3; hypothetical protein complement(1158826..1158984) Clostridium botulinum A str. ATCC 19397 5396765 YP_001383449.1 CDS feoB-3 NC_009697.1 1159010 1160773 R identified by match to protein family HMM PF01926; match to protein family HMM PF02421; match to protein family HMM PF07664; match to protein family HMM PF07670; match to protein family HMM TIGR00231; match to protein family HMM TIGR00437; match to protein family HMM TIGR00650; ferrous iron transport protein B complement(1159010..1160773) Clostridium botulinum A str. ATCC 19397 5394683 YP_001383450.1 CDS feoA-2 NC_009697.1 1160788 1161009 R identified by match to protein family HMM PF04023; ferrous ion transport protein A complement(1160788..1161009) Clostridium botulinum A str. ATCC 19397 5398171 YP_001383451.1 CDS CLB_1119 NC_009697.1 1161335 1161730 D identified by match to protein family HMM PF07238; hypothetical protein 1161335..1161730 Clostridium botulinum A str. ATCC 19397 5397887 YP_001383452.1 CDS CLB_1120 NC_009697.1 1161943 1162668 D identified by match to protein family HMM TIGR01488; match to protein family HMM TIGR01490; haloacid dehalogenase 1161943..1162668 Clostridium botulinum A str. ATCC 19397 5397944 YP_001383453.1 CDS CLB_1121 NC_009697.1 1162925 1163050 D identified by Glimmer3; hypothetical protein 1162925..1163050 Clostridium botulinum A str. ATCC 19397 5395199 YP_001383454.1 CDS CLB_1122 NC_009697.1 1163112 1164704 D identified by match to protein family HMM PF02839; glycosyl hydrolase 1163112..1164704 Clostridium botulinum A str. ATCC 19397 5396096 YP_001383455.1 CDS CLB_1123 NC_009697.1 1165116 1165583 D identified by match to protein family HMM PF00583; acetyltransferase 1165116..1165583 Clostridium botulinum A str. ATCC 19397 5395527 YP_001383456.1 CDS CLB_1124 NC_009697.1 1165861 1166817 D identified by match to protein family HMM PF00005; methionine ABC transporter ATP-binding protein 1165861..1166817 Clostridium botulinum A str. ATCC 19397 5395782 YP_001383457.1 CDS CLB_1125 NC_009697.1 1166819 1167460 D identified by match to protein family HMM PF00528; methionine ABC transporter permease 1166819..1167460 Clostridium botulinum A str. ATCC 19397 5396781 YP_001383458.1 CDS CLB_1126 NC_009697.1 1167515 1168327 D identified by match to protein family HMM PF03180; NLPA family lipoprotein 1167515..1168327 Clostridium botulinum A str. ATCC 19397 5396244 YP_001383459.1 CDS CLB_1127 NC_009697.1 1168516 1169328 D identified by match to protein family HMM PF03180; NLPA family lipoprotein 1168516..1169328 Clostridium botulinum A str. ATCC 19397 5396938 YP_001383460.1 CDS CLB_1128 NC_009697.1 1169556 1170722 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; amidohydrolase 1169556..1170722 Clostridium botulinum A str. ATCC 19397 5397149 YP_001383461.1 CDS CLB_1129 NC_009697.1 1170987 1171103 D identified by Glimmer3; hypothetical protein 1170987..1171103 Clostridium botulinum A str. ATCC 19397 5397537 YP_001383462.1 CDS CLB_1130 NC_009697.1 1171294 1171923 D hypothetical protein 1171294..1171923 Clostridium botulinum A str. ATCC 19397 5397706 YP_001383463.1 CDS CLB_1131 NC_009697.1 1172429 1173121 D identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 1172429..1173121 Clostridium botulinum A str. ATCC 19397 5397806 YP_001383464.1 CDS CLB_1132 NC_009697.1 1173366 1174229 D identified by match to protein family HMM PF02588; hypothetical protein 1173366..1174229 Clostridium botulinum A str. ATCC 19397 5395733 YP_001383465.1 CDS CLB_1133 NC_009697.1 1174438 1174650 D hypothetical protein 1174438..1174650 Clostridium botulinum A str. ATCC 19397 5395924 YP_001383466.1 CDS gltX NC_009697.1 1174908 1176365 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(1174908..1176365) Clostridium botulinum A str. ATCC 19397 5396897 YP_001383467.1 CDS gap-2 NC_009697.1 1176790 1177806 D identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; glyceraldehyde-3-phosphate dehydrogenase, type I 1176790..1177806 Clostridium botulinum A str. ATCC 19397 5397409 YP_001383468.1 CDS CLB_1136 NC_009697.1 1178051 1179559 R identified by match to protein family HMM PF00753; match to protein family HMM PF07521; metallo-beta-lactamase family protein complement(1178051..1179559) Clostridium botulinum A str. ATCC 19397 5394807 YP_001383469.1 CDS CLB_1137 NC_009697.1 1179925 1180074 D identified by Glimmer3; hypothetical protein 1179925..1180074 Clostridium botulinum A str. ATCC 19397 5396190 YP_001383470.1 CDS CLB_1138 NC_009697.1 1180217 1180861 D identified by match to protein family HMM PF01966; HD domain-containing protein 1180217..1180861 Clostridium botulinum A str. ATCC 19397 5397635 YP_001383471.1 CDS CLB_1139 NC_009697.1 1180917 1182287 D identified by match to protein family HMM PF00171; aldehyde dehydrogenase 1180917..1182287 Clostridium botulinum A str. ATCC 19397 5396645 YP_001383472.1 CDS CLB_1140 NC_009697.1 1182370 1183767 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein complement(1182370..1183767) Clostridium botulinum A str. ATCC 19397 5395632 YP_001383473.1 CDS CLB_1141 NC_009697.1 1184364 1185740 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein complement(1184364..1185740) Clostridium botulinum A str. ATCC 19397 5394972 YP_001383474.1 CDS CLB_1142 NC_009697.1 1186178 1186615 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1186178..1186615 Clostridium botulinum A str. ATCC 19397 5395461 YP_001383475.1 CDS CLB_1143 NC_009697.1 1186633 1188000 D identified by match to protein family HMM PF01554; match to protein family HMM PF01943; match to protein family HMM TIGR00797; MATE efflux family protein 1186633..1188000 Clostridium botulinum A str. ATCC 19397 5395752 YP_001383476.1 CDS CLB_1144 NC_009697.1 1188419 1188964 D hypothetical protein 1188419..1188964 Clostridium botulinum A str. ATCC 19397 5395356 YP_001383477.1 CDS CLB_1145 NC_009697.1 1189063 1190040 D hypothetical protein 1189063..1190040 Clostridium botulinum A str. ATCC 19397 5398070 YP_001383478.1 CDS CLB_1146 NC_009697.1 1190847 1192085 D ABC transporter substrate-binding protein 1190847..1192085 Clostridium botulinum A str. ATCC 19397 5395617 YP_001383479.1 CDS CLB_1147 NC_009697.1 1192087 1192953 D identified by match to protein family HMM PF00528; ABC transporter permease 1192087..1192953 Clostridium botulinum A str. ATCC 19397 5395504 YP_001383480.1 CDS CLB_1148 NC_009697.1 1192976 1193782 D identified by match to protein family HMM PF00528; ABC transporter permease 1192976..1193782 Clostridium botulinum A str. ATCC 19397 5395252 YP_001383481.1 CDS CLB_1149 NC_009697.1 1193794 1194813 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1193794..1194813 Clostridium botulinum A str. ATCC 19397 5397908 YP_001383482.1 CDS CLB_1150 NC_009697.1 1195116 1196075 D hypothetical protein 1195116..1196075 Clostridium botulinum A str. ATCC 19397 5396974 YP_001383483.1 CDS CLB_1151 NC_009697.1 1196179 1196730 D identified by match to protein family HMM PF00583; acetyltransferase 1196179..1196730 Clostridium botulinum A str. ATCC 19397 5396322 YP_001383484.1 CDS CLB_1152 NC_009697.1 1196740 1197075 D hypothetical protein 1196740..1197075 Clostridium botulinum A str. ATCC 19397 5395693 YP_001383485.1 CDS maa NC_009697.1 1198314 1198868 D identified by match to protein family HMM PF00132; maltose transacetylase 1198314..1198868 Clostridium botulinum A str. ATCC 19397 5396374 YP_001383486.1 CDS birA NC_009697.1 1199928 1200911 R identified by match to protein family HMM PF02237; match to protein family HMM PF03099; match to protein family HMM PF08279; match to protein family HMM TIGR00121; birA bifunctional protein complement(1199928..1200911) Clostridium botulinum A str. ATCC 19397 5396721 YP_001383487.1 CDS CLB_1157 NC_009697.1 1201075 1201278 D heavy metal-binding protein 1201075..1201278 Clostridium botulinum A str. ATCC 19397 5395395 YP_001383488.1 CDS CLB_1158 NC_009697.1 1201553 1201990 D identified by match to protein family HMM PF00571; hypothetical protein 1201553..1201990 Clostridium botulinum A str. ATCC 19397 5395821 YP_001383489.1 CDS CLB_1159 NC_009697.1 1202150 1203583 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 1202150..1203583 Clostridium botulinum A str. ATCC 19397 5396662 YP_001383490.1 CDS CLB_1160 NC_009697.1 1203695 1203820 R hypothetical protein complement(1203695..1203820) Clostridium botulinum A str. ATCC 19397 5395377 YP_001383491.1 CDS CLB_1161 NC_009697.1 1204449 1205228 D hypothetical protein 1204449..1205228 Clostridium botulinum A str. ATCC 19397 5397370 YP_001383492.1 CDS mgtE NC_009697.1 1205729 1207063 D identified by match to protein family HMM PF00571; match to protein family HMM PF01769; match to protein family HMM PF03448; match to protein family HMM TIGR00400; magnesium transporter 1205729..1207063 Clostridium botulinum A str. ATCC 19397 5395492 YP_001383493.1 CDS CLB_1163 NC_009697.1 1208066 1209139 D identified by match to protein family HMM PF00266; class V aminotransferase 1208066..1209139 Clostridium botulinum A str. ATCC 19397 5396698 YP_001383494.1 CDS serA NC_009697.1 1209367 1210311 D identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-3-phosphoglycerate dehydrogenase 1209367..1210311 Clostridium botulinum A str. ATCC 19397 5396463 YP_001383495.1 CDS CLB_1165 NC_009697.1 1210289 1211611 D identified by match to protein family HMM PF06245; hypothetical protein 1210289..1211611 Clostridium botulinum A str. ATCC 19397 5394716 YP_001383496.1 CDS CLB_1166 NC_009697.1 1212211 1213401 D identified by match to protein family HMM PF00258; match to protein family HMM PF00753; metallo-beta-lactamase/flavodoxin domain-containing protein 1212211..1213401 Clostridium botulinum A str. ATCC 19397 5397143 YP_001383497.1 CDS CLB_1167 NC_009697.1 1213560 1217849 D identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; CoA-substrate-specific enzyme activase 1213560..1217849 Clostridium botulinum A str. ATCC 19397 5396883 YP_001383498.1 CDS CLB_1168 NC_009697.1 1217923 1219437 R identified by match to protein family HMM PF02028; match to protein family HMM TIGR00842; choline/carnitine/betaine transporter complement(1217923..1219437) Clostridium botulinum A str. ATCC 19397 5395980 YP_001383499.1 CDS CLB_1169 NC_009697.1 1219796 1220422 D identified by match to protein family HMM PF00392; match to protein family HMM PF02080; GntR family transcriptional regulator 1219796..1220422 Clostridium botulinum A str. ATCC 19397 5394744 YP_001383500.1 CDS CLB_1170 NC_009697.1 1220533 1221033 D hypothetical protein 1220533..1221033 Clostridium botulinum A str. ATCC 19397 5395761 YP_001383501.1 CDS CLB_1171 NC_009697.1 1221332 1221892 D identified by match to protein family HMM PF00857; pyrazinamidase/nicotinamidase 1221332..1221892 Clostridium botulinum A str. ATCC 19397 5396216 YP_001383502.1 CDS CLB_1172 NC_009697.1 1222050 1222361 D identified by match to protein family HMM PF00581; phage shock protein 1222050..1222361 Clostridium botulinum A str. ATCC 19397 5396285 YP_001383503.1 CDS CLB_1173 NC_009697.1 1222437 1222901 D hypothetical protein 1222437..1222901 Clostridium botulinum A str. ATCC 19397 5396434 YP_001383504.1 CDS CLB_1174 NC_009697.1 1223178 1223378 D hypothetical protein 1223178..1223378 Clostridium botulinum A str. ATCC 19397 5395247 YP_001383505.1 CDS CLB_1175 NC_009697.1 1223555 1224466 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 1223555..1224466 Clostridium botulinum A str. ATCC 19397 5396875 YP_001383506.1 CDS xpt-2 NC_009697.1 1224627 1225199 D Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase 1224627..1225199 Clostridium botulinum A str. ATCC 19397 5397856 YP_001383507.1 CDS CLB_1177 NC_009697.1 1225497 1226078 D hypothetical protein 1225497..1226078 Clostridium botulinum A str. ATCC 19397 5395353 YP_001383508.1 CDS CLB_1178 NC_009697.1 1226387 1227769 D identified by match to protein family HMM PF00581; thiosulfate sulfurtransferase 1226387..1227769 Clostridium botulinum A str. ATCC 19397 5398104 YP_001383509.1 CDS CLB_1179 NC_009697.1 1227965 1228387 D identified by Glimmer3; hypothetical protein 1227965..1228387 Clostridium botulinum A str. ATCC 19397 5395880 YP_001383510.1 CDS CLB_1180 NC_009697.1 1228737 1229837 D identified by match to protein family HMM PF01594; transporter 1228737..1229837 Clostridium botulinum A str. ATCC 19397 5397269 YP_001383511.1 CDS CLB_1181 NC_009697.1 1230017 1230346 D identified by match to protein family HMM PF03819; MazG family protein 1230017..1230346 Clostridium botulinum A str. ATCC 19397 5397227 YP_001383512.1 CDS CLB_1182 NC_009697.1 1230483 1232222 D hypothetical protein 1230483..1232222 Clostridium botulinum A str. ATCC 19397 5395050 YP_001383513.1 CDS CLB_1183 NC_009697.1 1232993 1233133 D identified by Glimmer3; hypothetical protein 1232993..1233133 Clostridium botulinum A str. ATCC 19397 5397385 YP_001383514.1 CDS CLB_1184 NC_009697.1 1233315 1234514 D identified by Glimmer3; hypothetical protein 1233315..1234514 Clostridium botulinum A str. ATCC 19397 5395895 YP_001383515.1 CDS CLB_1185 NC_009697.1 1234905 1235951 D identified by match to protein family HMM PF01547; ABC transporter substrate-binding protein 1234905..1235951 Clostridium botulinum A str. ATCC 19397 5397379 YP_001383516.1 CDS CLB_1186 NC_009697.1 1235953 1237641 D identified by match to protein family HMM PF00528; ABC transporter permease 1235953..1237641 Clostridium botulinum A str. ATCC 19397 5397333 YP_001383517.1 CDS CLB_1187 NC_009697.1 1237604 1238539 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1237604..1238539 Clostridium botulinum A str. ATCC 19397 5395260 YP_001383518.1 CDS CLB_1188 NC_009697.1 1238604 1239398 R hypothetical protein complement(1238604..1239398) Clostridium botulinum A str. ATCC 19397 5397596 YP_001383519.1 CDS CLB_1189 NC_009697.1 1239702 1240868 D hypothetical protein 1239702..1240868 Clostridium botulinum A str. ATCC 19397 5396858 YP_001383520.1 CDS rpsA NC_009697.1 1241267 1242430 D in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1241267..1242430 Clostridium botulinum A str. ATCC 19397 5398102 YP_001383521.1 CDS CLB_1191 NC_009697.1 1242613 1243032 D identified by match to protein family HMM PF03061; match to protein family HMM TIGR00051; thioesterase family protein 1242613..1243032 Clostridium botulinum A str. ATCC 19397 5397017 YP_001383522.1 CDS CLB_1192 NC_009697.1 1243204 1243620 D hypothetical protein 1243204..1243620 Clostridium botulinum A str. ATCC 19397 5396252 YP_001383523.1 CDS CLB_1193 NC_009697.1 1244489 1245496 D identified by match to protein family HMM PF04392; ABC transporter substrate-binding protein 1244489..1245496 Clostridium botulinum A str. ATCC 19397 5395464 YP_001383524.1 CDS CLB_1194 NC_009697.1 1245496 1246401 D identified by match to protein family HMM PF02653; ABC transporter permease 1245496..1246401 Clostridium botulinum A str. ATCC 19397 5395375 YP_001383525.1 CDS CLB_1195 NC_009697.1 1246364 1247158 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1246364..1247158 Clostridium botulinum A str. ATCC 19397 5394601 YP_001383526.1 CDS CLB_1196 NC_009697.1 1247488 1247790 D identified by Glimmer3; hypothetical protein 1247488..1247790 Clostridium botulinum A str. ATCC 19397 5397922 YP_001383527.1 CDS asdA NC_009697.1 1248223 1249866 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1248223..1249866 Clostridium botulinum A str. ATCC 19397 5396987 YP_001383528.1 CDS CLB_1198 NC_009697.1 1249992 1250873 R identified by match to protein family HMM PF00892; match to protein family HMM PF03151; match to protein family HMM PF08449; hypothetical protein complement(1249992..1250873) Clostridium botulinum A str. ATCC 19397 5397092 YP_001383529.1 CDS CLB_1199 NC_009697.1 1251456 1252553 D identified by match to protein family HMM PF00294; match to protein family HMM PF08279; PfkB family kinase 1251456..1252553 Clostridium botulinum A str. ATCC 19397 5394756 YP_001383530.1 CDS CLB_1200 NC_009697.1 1252547 1253470 D identified by match to protein family HMM PF04227; indigoidine synthase A family protein 1252547..1253470 Clostridium botulinum A str. ATCC 19397 5395466 YP_001383531.1 CDS panE NC_009697.1 1253962 1254873 D identified by match to protein family HMM PF02558; match to protein family HMM PF08546; match to protein family HMM TIGR00745; 2-dehydropantoate 2-reductase 1253962..1254873 Clostridium botulinum A str. ATCC 19397 5397774 YP_001383532.1 CDS fchA NC_009697.1 1255176 1255808 D identified by match to protein family HMM PF04961; methenyltetrahydrofolate cyclohydrolase 1255176..1255808 Clostridium botulinum A str. ATCC 19397 5395381 YP_001383533.1 CDS folD NC_009697.1 1255808 1256656 D identified by match to protein family HMM PF00763; match to protein family HMM PF02882; methylenetetrahydrofolate dehydrogenase 1255808..1256656 Clostridium botulinum A str. ATCC 19397 5398001 YP_001383534.1 CDS CLB_1204 NC_009697.1 1256976 1257770 D identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD family hydrolase 1256976..1257770 Clostridium botulinum A str. ATCC 19397 5394845 YP_001383535.1 CDS CLB_1205 NC_009697.1 1257997 1258503 R identified by match to protein family HMM PF00583; diamine N-acetyltransferase complement(1257997..1258503) Clostridium botulinum A str. ATCC 19397 5398017 YP_001383536.1 CDS CLB_1206 NC_009697.1 1258684 1258827 D identified by Glimmer3; hypothetical protein 1258684..1258827 Clostridium botulinum A str. ATCC 19397 5397038 YP_001383537.1 CDS CLB_1207 NC_009697.1 1258945 1259676 D hypothetical protein 1258945..1259676 Clostridium botulinum A str. ATCC 19397 5397905 YP_001383538.1 CDS CLB_1208 NC_009697.1 1259796 1260605 D identified by match to protein family HMM PF02535; ZIP family zinc transporter 1259796..1260605 Clostridium botulinum A str. ATCC 19397 5396980 YP_001383539.1 CDS CLB_1209 NC_009697.1 1261277 1261714 D identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; rrf2 family protein 1261277..1261714 Clostridium botulinum A str. ATCC 19397 5396242 YP_001383540.1 CDS cysK-2 NC_009697.1 1262043 1262972 D identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; cysteine synthase A 1262043..1262972 Clostridium botulinum A str. ATCC 19397 5398140 YP_001383541.1 CDS CLB_1211 NC_009697.1 1263017 1263685 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease 1263017..1263685 Clostridium botulinum A str. ATCC 19397 5395856 YP_001383542.1 CDS CLB_1212 NC_009697.1 1263720 1264544 D identified by match to protein family HMM PF00497; polar amino acid ABC transporter amino acid-binding protein 1263720..1264544 Clostridium botulinum A str. ATCC 19397 5396558 YP_001383543.1 CDS iscS-1 NC_009697.1 1264645 1265775 D identified by match to protein family HMM PF00266; match to protein family HMM PF01212; cysteine desulfhydrase 1264645..1265775 Clostridium botulinum A str. ATCC 19397 5395104 YP_001383544.1 CDS CLB_1214 NC_009697.1 1265847 1266647 D identified by match to protein family HMM PF01171; match to protein family HMM PF06508; match to protein family HMM TIGR00268; hypothetical protein 1265847..1266647 Clostridium botulinum A str. ATCC 19397 5395607 YP_001383545.1 CDS CLB_1215 NC_009697.1 1266802 1266930 D identified by Glimmer3; hypothetical protein 1266802..1266930 Clostridium botulinum A str. ATCC 19397 5397337 YP_001383546.1 CDS mnmA NC_009697.1 1267046 1268116 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 1267046..1268116 Clostridium botulinum A str. ATCC 19397 5395591 YP_001383547.1 CDS CLB_1217 NC_009697.1 1268456 1269175 D identified by match to protein family HMM PF00072; match to protein family HMM PF04397; LytTr family DNA-binding response regulator 1268456..1269175 Clostridium botulinum A str. ATCC 19397 5395949 YP_001383548.1 CDS CLB_1218 NC_009697.1 1269172 1270515 D identified by match to protein family HMM PF02518; sensor histidine kinase 1269172..1270515 Clostridium botulinum A str. ATCC 19397 5394875 YP_001383549.1 CDS bcrA NC_009697.1 1270888 1271811 D identified by match to protein family HMM PF00005; bacitracin ABC transporter ATP-binding protein 1270888..1271811 Clostridium botulinum A str. ATCC 19397 5398134 YP_001383550.1 CDS CLB_1220 NC_009697.1 1271804 1272544 D hypothetical protein 1271804..1272544 Clostridium botulinum A str. ATCC 19397 5395042 YP_001383551.1 CDS CLB_1221 NC_009697.1 1273147 1275033 D identified by match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase family protein 1273147..1275033 Clostridium botulinum A str. ATCC 19397 5398126 YP_001383552.1 CDS CLB_1222 NC_009697.1 1275380 1275547 D hypothetical protein 1275380..1275547 Clostridium botulinum A str. ATCC 19397 5396924 YP_001383553.1 CDS CLB_1223 NC_009697.1 1275587 1279105 R identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176; pyruvate ferredoxin oxidoreductase complement(1275587..1279105) Clostridium botulinum A str. ATCC 19397 5398015 YP_001383554.1 CDS CLB_1224 NC_009697.1 1279408 1280028 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1279408..1280028 Clostridium botulinum A str. ATCC 19397 5396911 YP_001383555.1 CDS CLB_1225 NC_009697.1 1280034 1281281 D identified by match to protein family HMM PF00999; monovalent cation:proton antiporter-2 (CPA2) family protein 1280034..1281281 Clostridium botulinum A str. ATCC 19397 5397540 YP_001383556.1 CDS CLB_1226 NC_009697.1 1281582 1283057 D identified by match to protein family HMM PF02696; hypothetical protein 1281582..1283057 Clostridium botulinum A str. ATCC 19397 5395764 YP_001383557.1 CDS CLB_1227 NC_009697.1 1283568 1285301 D identified by match to protein family HMM PF01593; amine oxidase 1283568..1285301 Clostridium botulinum A str. ATCC 19397 5396207 YP_001383558.1 CDS CLB_1228 NC_009697.1 1285346 1286236 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(1285346..1286236) Clostridium botulinum A str. ATCC 19397 5395363 YP_001383559.1 CDS CLB_1229 NC_009697.1 1286436 1287161 D hypothetical protein 1286436..1287161 Clostridium botulinum A str. ATCC 19397 5394626 YP_001383560.1 CDS CLB_1230 NC_009697.1 1287175 1288503 D identified by match to protein family HMM PF02055; O-glycosyl hydrolase, family protein 1287175..1288503 Clostridium botulinum A str. ATCC 19397 5394768 YP_001383561.1 CDS CLB_1231 NC_009697.1 1288567 1289508 D identified by match to protein family HMM PF00480; ROK family protein 1288567..1289508 Clostridium botulinum A str. ATCC 19397 5395868 YP_001383562.1 CDS CLB_1232 NC_009697.1 1289511 1290956 D identified by match to protein family HMM PF00232; glycosyl hydrolase family protein 1289511..1290956 Clostridium botulinum A str. ATCC 19397 5397056 YP_001383563.1 CDS amyB NC_009697.1 1291627 1293255 D identified by match to protein family HMM PF00686; match to protein family HMM PF01373; beta-amylase 1291627..1293255 Clostridium botulinum A str. ATCC 19397 5394971 YP_001383564.1 CDS tyrS-1 NC_009697.1 1294024 1295226 D catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 1294024..1295226 Clostridium botulinum A str. ATCC 19397 5395751 YP_001383565.1 CDS CLB_1235 NC_009697.1 1295513 1295884 D identified by match to protein family HMM PF00392; GntR family transcriptional regulator 1295513..1295884 Clostridium botulinum A str. ATCC 19397 5395562 YP_001383566.1 CDS CLB_1236 NC_009697.1 1295877 1296749 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1295877..1296749 Clostridium botulinum A str. ATCC 19397 5397464 YP_001383567.1 CDS CLB_1237 NC_009697.1 1296750 1297496 D hypothetical protein 1296750..1297496 Clostridium botulinum A str. ATCC 19397 5397576 YP_001383568.1 CDS CLB_1238 NC_009697.1 1297630 1297998 R hypothetical protein complement(1297630..1297998) Clostridium botulinum A str. ATCC 19397 5397087 YP_001383569.1 CDS CLB_1239 NC_009697.1 1298345 1299262 D hypothetical protein 1298345..1299262 Clostridium botulinum A str. ATCC 19397 5398142 YP_001383570.1 CDS CLB_1240 NC_009697.1 1299451 1302162 D identified by Glimmer3; hypothetical protein 1299451..1302162 Clostridium botulinum A str. ATCC 19397 5395108 YP_001383571.1 CDS CLB_1241 NC_009697.1 1302240 1303754 D identified by match to protein family HMM PF00704; match to protein family HMM PF01476; match to protein family HMM PF08239; glycosyl hydrolase family protein 1302240..1303754 Clostridium botulinum A str. ATCC 19397 5397815 YP_001383572.1 CDS CLB_1242 NC_009697.1 1303928 1305187 D identified by match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; sensory box-containing diguanylate cyclase 1303928..1305187 Clostridium botulinum A str. ATCC 19397 5397573 YP_001383573.1 CDS sdhB NC_009697.1 1305587 1306261 D identified by match to protein family HMM PF01842; match to protein family HMM PF03315; match to protein family HMM TIGR00719; L-serine dehydratase, iron-sulfur-dependent subunit beta 1305587..1306261 Clostridium botulinum A str. ATCC 19397 5395830 YP_001383574.1 CDS sdhA NC_009697.1 1306274 1307164 D identified by match to protein family HMM PF03313; match to protein family HMM TIGR00718; L-serine dehydratase, iron-sulfur-dependent subunit alpha 1306274..1307164 Clostridium botulinum A str. ATCC 19397 5394628 YP_001383575.1 CDS CLB_1246 NC_009697.1 1307588 1307797 D identified by Glimmer3; hypothetical protein 1307588..1307797 Clostridium botulinum A str. ATCC 19397 5395500 YP_001383576.1 CDS CLB_1247 NC_009697.1 1307956 1308099 R identified by Glimmer3; hypothetical protein complement(1307956..1308099) Clostridium botulinum A str. ATCC 19397 5397927 YP_001383577.1 CDS CLB_1248 NC_009697.1 1308371 1308955 D hypothetical protein 1308371..1308955 Clostridium botulinum A str. ATCC 19397 5394721 YP_001383578.1 CDS CLB_1249 NC_009697.1 1308977 1309945 R identified by match to protein family HMM PF01244; dipeptidase family protein complement(1308977..1309945) Clostridium botulinum A str. ATCC 19397 5397696 YP_001383579.1 CDS CLB_1250 NC_009697.1 1310325 1311017 R identified by Glimmer3; hypothetical protein complement(1310325..1311017) Clostridium botulinum A str. ATCC 19397 5398153 YP_001383580.1 CDS CLB_1251 NC_009697.1 1311124 1312407 R identified by match to protein family HMM PF02687; ABC transporter permease complement(1311124..1312407) Clostridium botulinum A str. ATCC 19397 5394905 YP_001383581.1 CDS CLB_1252 NC_009697.1 1312409 1313224 R identified by Glimmer3; hypothetical protein complement(1312409..1313224) Clostridium botulinum A str. ATCC 19397 5397876 YP_001383582.1 CDS CLB_1253 NC_009697.1 1313261 1313935 R identified by match to protein family HMM PF00005; oligopeptide ABC transporter ATP-binding protein complement(1313261..1313935) Clostridium botulinum A str. ATCC 19397 5396443 YP_001383583.1 CDS CLB_1254 NC_009697.1 1314108 1314956 R identified by match to protein family HMM PF00528; oligopeptide ABC transporter permease complement(1314108..1314956) Clostridium botulinum A str. ATCC 19397 5397023 YP_001383584.1 CDS CLB_1255 NC_009697.1 1314962 1315915 R identified by match to protein family HMM PF00528; oligopeptide ABC transporter permease complement(1314962..1315915) Clostridium botulinum A str. ATCC 19397 5396777 YP_001383585.1 CDS CLB_1256 NC_009697.1 1316114 1317712 R identified by match to protein family HMM PF00496; oligopeptide ABC transporter oligopeptide-binding protein complement(1316114..1317712) Clostridium botulinum A str. ATCC 19397 5396134 YP_001383586.1 CDS CLB_1257 NC_009697.1 1318004 1318165 D hypothetical protein 1318004..1318165 Clostridium botulinum A str. ATCC 19397 5395850 YP_001383587.1 CDS cotJB NC_009697.1 1318199 1318471 D spore coat peptide assembly protein CotJB 1318199..1318471 Clostridium botulinum A str. ATCC 19397 5395487 YP_001383588.1 CDS cotJC NC_009697.1 1318502 1319074 D identified by match to protein family HMM PF05067; spore coat peptide assembly protein CotJC 1318502..1319074 Clostridium botulinum A str. ATCC 19397 5394823 YP_001383589.1 CDS CLB_1260 NC_009697.1 1319304 1320323 D hypothetical protein 1319304..1320323 Clostridium botulinum A str. ATCC 19397 5397702 YP_001383590.1 CDS CLB_1261 NC_009697.1 1320340 1321404 D hypothetical protein 1320340..1321404 Clostridium botulinum A str. ATCC 19397 5395316 YP_001383591.1 CDS CLB_1262 NC_009697.1 1322051 1322542 D identified by match to protein family HMM PF04525; hypothetical protein 1322051..1322542 Clostridium botulinum A str. ATCC 19397 5395329 YP_001383592.1 CDS CLB_1263 NC_009697.1 1322780 1323184 R identified by Glimmer3; hypothetical protein complement(1322780..1323184) Clostridium botulinum A str. ATCC 19397 5394754 YP_001383593.1 CDS dut NC_009697.1 1323531 1324157 D identified by match to protein family HMM PF00692; deoxyuridine 5'-triphosphate nucleotidohydrolase 1323531..1324157 Clostridium botulinum A str. ATCC 19397 5396357 YP_001383594.1 CDS CLB_1265 NC_009697.1 1324211 1324402 R identified by match to protein family HMM TIGR02861; small acid-soluble spore protein, H-type complement(1324211..1324402) Clostridium botulinum A str. ATCC 19397 5395672 YP_001383595.1 CDS CLB_1266 NC_009697.1 1324916 1325671 R hypothetical protein complement(1324916..1325671) Clostridium botulinum A str. ATCC 19397 5395090 YP_001383596.1 CDS CLB_1267 NC_009697.1 1326065 1326211 D identified by similarity to GB:ABK61158.1; hypothetical protein 1326065..1326211 Clostridium botulinum A str. ATCC 19397 5397454 YP_001383597.1 CDS CLB_1268 NC_009697.1 1326329 1326862 R identified by match to protein family HMM PF01381; match to protein family HMM PF07883; DNA-binding protein complement(1326329..1326862) Clostridium botulinum A str. ATCC 19397 5397872 YP_001383598.1 CDS CLB_1269 NC_009697.1 1327286 1328335 D transcriptional regulator 1327286..1328335 Clostridium botulinum A str. ATCC 19397 5395018 YP_001383599.1 CDS CLB_1270 NC_009697.1 1328374 1328535 D identified by Glimmer3; hypothetical protein 1328374..1328535 Clostridium botulinum A str. ATCC 19397 5395585 YP_001383600.1 CDS CLB_1271 NC_009697.1 1328769 1329356 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1328769..1329356 Clostridium botulinum A str. ATCC 19397 5398182 YP_001383601.1 CDS CLB_1272 NC_009697.1 1329390 1329602 R identified by Glimmer3; hypothetical protein complement(1329390..1329602) Clostridium botulinum A str. ATCC 19397 5395706 YP_001383602.1 CDS CLB_1273 NC_009697.1 1329652 1329873 D identified by Glimmer3; hypothetical protein 1329652..1329873 Clostridium botulinum A str. ATCC 19397 5397939 YP_001383603.1 CDS CLB_1274 NC_009697.1 1329885 1330118 D identified by Glimmer3; hypothetical protein 1329885..1330118 Clostridium botulinum A str. ATCC 19397 5397432 YP_001383604.1 CDS CLB_1275 NC_009697.1 1330624 1332060 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein complement(1330624..1332060) Clostridium botulinum A str. ATCC 19397 5395268 YP_001383605.1 CDS CLB_1276 NC_009697.1 1333230 1333538 D identified by Glimmer3; hypothetical protein 1333230..1333538 Clostridium botulinum A str. ATCC 19397 5396778 YP_001383606.1 CDS CLB_1277 NC_009697.1 1334200 1334403 D identified by match to protein family HMM PF01381; DNA-binding protein 1334200..1334403 Clostridium botulinum A str. ATCC 19397 5395280 YP_001383607.1 CDS CLB_1278 NC_009697.1 1335283 1335540 D hypothetical protein 1335283..1335540 Clostridium botulinum A str. ATCC 19397 5397816 YP_001383608.1 CDS CLB_1279 NC_009697.1 1335824 1336570 D lipoprotein 1335824..1336570 Clostridium botulinum A str. ATCC 19397 5397351 YP_001383609.1 CDS CLB_1280 NC_009697.1 1336889 1337116 D identified by match to protein family HMM PF00462; match to protein family HMM TIGR02196; rubredoxin 1336889..1337116 Clostridium botulinum A str. ATCC 19397 5394947 YP_001383610.1 CDS CLB_1281 NC_009697.1 1337148 1338608 R identified by match to protein family HMM PF00171; glyceraldehyde-3-phosphate dehydrogenase complement(1337148..1338608) Clostridium botulinum A str. ATCC 19397 5397694 YP_001383611.1 CDS CLB_1282 NC_009697.1 1338648 1339589 R identified by match to protein family HMM PF00070; match to protein family HMM PF07992; thioredoxin reductase complement(1338648..1339589) Clostridium botulinum A str. ATCC 19397 5394550 YP_001383612.1 CDS grdX NC_009697.1 1340386 1340763 D GrdX protein 1340386..1340763 Clostridium botulinum A str. ATCC 19397 5397001 YP_001383613.1 CDS grdE NC_009697.1 1340854 1342140 D identified by match to protein family HMM PF09338; glycine reductase complex component B, alpha and beta subunits 1340854..1342140 Clostridium botulinum A str. ATCC 19397 5395414 YP_001383614.1 CDS grdB NC_009697.1 1342173 1343474 D Selenoprotein. identified by similarity to SP:P52217; match to protein family HMM PF07355; match to protein family HMM TIGR01918; glycine reductase complex component B, gamma subunit, selenocysteine-containing 1342173..1343474 Clostridium botulinum A str. ATCC 19397 5395647 YP_001383615.1 CDS trxB NC_009697.1 1343625 1344566 D identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF07992; match to protein family HMM TIGR01292; thioredoxin-disulfide reductase 1343625..1344566 Clostridium botulinum A str. ATCC 19397 5398097 YP_001383616.1 CDS CLB_1288 NC_009697.1 1344600 1344920 D identified by match to protein family HMM PF00085; thioredoxin family protein 1344600..1344920 Clostridium botulinum A str. ATCC 19397 5395835 YP_001383617.1 CDS grdA NC_009697.1 1345006 1345482 D GrdA accepts a carboxymethylselenoether from protein B and transfers it to protein C forming a protein C-bound acetyl-thioester; oxidized GrdA is then reduced by thioredoxin; glycine/sarcosine/betaine reductase complex protein A 1345006..1345482 Clostridium botulinum A str. ATCC 19397 5394978 YP_001383618.1 CDS grdC NC_009697.1 1345577 1347115 D identified by match to protein family HMM PF08545; glycine reductase complex component C subunit beta 1345577..1347115 Clostridium botulinum A str. ATCC 19397 5398026 YP_001383619.1 CDS grdD NC_009697.1 1347131 1348297 D identified by match to protein family HMM PF02504; glycine reductase complex component C subunit alpha 1347131..1348297 Clostridium botulinum A str. ATCC 19397 5396764 YP_001383620.1 CDS CLB_1293 NC_009697.1 1348724 1349335 D responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 1348724..1349335 Clostridium botulinum A str. ATCC 19397 5398012 YP_001383621.1 CDS CLB_1294 NC_009697.1 1349401 1351626 D identified by match to protein family HMM PF07669; restriction endonuclease family protein 1349401..1351626 Clostridium botulinum A str. ATCC 19397 5397492 YP_001383622.1 CDS mtnK NC_009697.1 1352062 1353273 D phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway; methylthioribose kinase 1352062..1353273 Clostridium botulinum A str. ATCC 19397 5396319 YP_001383623.1 CDS mtnA NC_009697.1 1353413 1354462 D isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway; methylthioribose-1-phosphate isomerase 1353413..1354462 Clostridium botulinum A str. ATCC 19397 5398041 YP_001383624.1 CDS CLB_1297 NC_009697.1 1354486 1354596 D identified by Glimmer3; hypothetical protein 1354486..1354596 Clostridium botulinum A str. ATCC 19397 5397805 YP_001383625.1 CDS CLB_1298 NC_009697.1 1354613 1355260 D identified by match to protein family HMM PF00596; aldolase 1354613..1355260 Clostridium botulinum A str. ATCC 19397 5397647 YP_001383626.1 CDS CLB_1299 NC_009697.1 1355304 1355444 D identified by Glimmer3; hypothetical protein 1355304..1355444 Clostridium botulinum A str. ATCC 19397 5398107 YP_001383627.1 CDS CLB_1300 NC_009697.1 1355434 1356228 D identified by match to protein family HMM PF00455; match to protein family HMM PF08220; match to protein family HMM PF08279; DeoR family transcriptional regulator 1355434..1356228 Clostridium botulinum A str. ATCC 19397 5395932 YP_001383628.1 CDS CLB_1301 NC_009697.1 1356535 1356894 D hypothetical protein 1356535..1356894 Clostridium botulinum A str. ATCC 19397 5395137 YP_001383629.1 CDS CLB_1302 NC_009697.1 1357248 1358123 R identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein complement(1357248..1358123) Clostridium botulinum A str. ATCC 19397 5395015 YP_001383630.1 CDS CLB_1303 NC_009697.1 1358371 1359099 D identified by match to protein family HMM PF04239; hypothetical protein 1358371..1359099 Clostridium botulinum A str. ATCC 19397 5396080 YP_001383631.1 CDS CLB_1304 NC_009697.1 1359261 1359626 D hypothetical protein 1359261..1359626 Clostridium botulinum A str. ATCC 19397 5395702 YP_001383632.1 CDS CLB_1305 NC_009697.1 1359768 1360106 D hypothetical protein 1359768..1360106 Clostridium botulinum A str. ATCC 19397 5395294 YP_001383633.1 CDS CLB_1306 NC_009697.1 1360103 1360576 D hypothetical protein 1360103..1360576 Clostridium botulinum A str. ATCC 19397 5396276 YP_001383634.1 CDS CLB_1307 NC_009697.1 1360959 1361324 D hypothetical protein 1360959..1361324 Clostridium botulinum A str. ATCC 19397 5396910 YP_001383635.1 CDS CLB_1308 NC_009697.1 1361393 1362100 D hypothetical protein 1361393..1362100 Clostridium botulinum A str. ATCC 19397 5394697 YP_001383636.1 CDS CLB_1309 NC_009697.1 1362171 1362341 R identified by Glimmer3; hypothetical protein complement(1362171..1362341) Clostridium botulinum A str. ATCC 19397 5395991 YP_001383637.1 CDS CLB_1310 NC_009697.1 1362722 1362955 R identified by Glimmer3; hypothetical protein complement(1362722..1362955) Clostridium botulinum A str. ATCC 19397 5398061 YP_001383638.1 CDS CLB_1311 NC_009697.1 1364143 1364439 D hypothetical protein 1364143..1364439 Clostridium botulinum A str. ATCC 19397 5394969 YP_001383639.1 CDS CLB_1312 NC_009697.1 1364467 1364763 D hypothetical protein 1364467..1364763 Clostridium botulinum A str. ATCC 19397 5395449 YP_001383640.1 CDS CLB_1313 NC_009697.1 1364820 1367117 D molybdenum cofactor-binding protein; participates in purine salvage; xanthine dehydrogenase subunit XdhA 1364820..1367117 Clostridium botulinum A str. ATCC 19397 5395282 YP_001383641.1 CDS CLB_1314 NC_009697.1 1367131 1368015 D FAD-binding subunit; with XdhA and XdhC participates in purine salvage; xanthine dehydrogenase subunit XdhB 1367131..1368015 Clostridium botulinum A str. ATCC 19397 5397196 YP_001383642.1 CDS CLB_1315 NC_009697.1 1368047 1368520 D identified by match to protein family HMM PF00111; match to protein family HMM PF01799; xanthine dehydrogenase family protein, iron-sulfur binding subunit 1368047..1368520 Clostridium botulinum A str. ATCC 19397 5394639 YP_001383643.1 CDS CLB_1316 NC_009697.1 1368636 1369109 D identified by match to protein family HMM PF00383; guanine deaminase 1368636..1369109 Clostridium botulinum A str. ATCC 19397 5397507 YP_001383644.1 CDS topB NC_009697.1 1369499 1371694 D decatenates replicating daughter chromosomes; DNA topoisomerase III 1369499..1371694 Clostridium botulinum A str. ATCC 19397 5395704 YP_001383645.1 CDS CLB_1318 NC_009697.1 1372006 1372611 D identified by match to protein family HMM PF02659; hypothetical protein 1372006..1372611 Clostridium botulinum A str. ATCC 19397 5397427 YP_001383646.1 CDS CLB_1319 NC_009697.1 1372677 1372913 D hypothetical protein 1372677..1372913 Clostridium botulinum A str. ATCC 19397 5398154 YP_001383647.1 CDS CLB_1320 NC_009697.1 1372990 1373121 R identified by Glimmer3; hypothetical protein complement(1372990..1373121) Clostridium botulinum A str. ATCC 19397 5395036 YP_001383648.1 CDS CLB_1321 NC_009697.1 1373640 1374293 D similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase 1373640..1374293 Clostridium botulinum A str. ATCC 19397 5395864 YP_001383649.1 CDS CLB_1322 NC_009697.1 1374692 1376356 D identified by match to protein family HMM PF00753; match to protein family HMM PF07521; match to protein family HMM TIGR00649; RNA-metabolising metallo-beta-lactamase 1374692..1376356 Clostridium botulinum A str. ATCC 19397 5396682 YP_001383650.1 CDS CLB_1323 NC_009697.1 1376661 1378013 D identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein 1376661..1378013 Clostridium botulinum A str. ATCC 19397 5397348 YP_001383651.1 CDS CLB_1324 NC_009697.1 1378328 1379173 D identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase 1378328..1379173 Clostridium botulinum A str. ATCC 19397 5395308 YP_001383652.1 CDS CLB_1325 NC_009697.1 1379193 1380818 D STE-like transcription factor domain-containing protein 1379193..1380818 Clostridium botulinum A str. ATCC 19397 5396128 YP_001383653.1 CDS CLB_1326 NC_009697.1 1380824 1382086 D identified by match to protein family HMM PF00535; glycosyl transferase family protein 1380824..1382086 Clostridium botulinum A str. ATCC 19397 5396476 YP_001383654.1 CDS CLB_1327 NC_009697.1 1382367 1384463 D cellulose synthase domain-containing protein 1382367..1384463 Clostridium botulinum A str. ATCC 19397 5395240 YP_001383655.1 CDS CLB_1328 NC_009697.1 1384880 1385974 D hypothetical protein 1384880..1385974 Clostridium botulinum A str. ATCC 19397 5394836 YP_001383656.1 CDS CLB_1329 NC_009697.1 1386202 1386366 D hypothetical protein 1386202..1386366 Clostridium botulinum A str. ATCC 19397 5394921 YP_001383657.1 CDS CLB_1330 NC_009697.1 1386701 1387504 D hypothetical protein 1386701..1387504 Clostridium botulinum A str. ATCC 19397 5394637 YP_001383658.1 CDS CLB_1331 NC_009697.1 1387780 1388046 D identified by match to protein family HMM PF02583; hypothetical protein 1387780..1388046 Clostridium botulinum A str. ATCC 19397 5397799 YP_001383659.1 CDS CLB_1332 NC_009697.1 1388083 1390518 D identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR00003; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; copper-translocating P-type ATPase 1388083..1390518 Clostridium botulinum A str. ATCC 19397 5395817 YP_001383660.1 CDS copZ NC_009697.1 1390641 1390856 D identified by match to protein family HMM PF00403; copper chaperone CopZ 1390641..1390856 Clostridium botulinum A str. ATCC 19397 5397692 YP_001383661.1 CDS CLB_1334 NC_009697.1 1391238 1393610 D identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; cation-transporting ATPase, P-type 1391238..1393610 Clostridium botulinum A str. ATCC 19397 5397656 YP_001383662.1 CDS CLB_1335 NC_009697.1 1394088 1395806 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 1394088..1395806 Clostridium botulinum A str. ATCC 19397 5396265 YP_001383663.1 CDS CLB_1336 NC_009697.1 1396144 1396938 D identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein 1396144..1396938 Clostridium botulinum A str. ATCC 19397 5396301 YP_001383664.1 CDS CLB_1337 NC_009697.1 1397102 1397458 D identified by match to protein family HMM PF02579; dinitrogenase iron-molybdenum cofactor family protein 1397102..1397458 Clostridium botulinum A str. ATCC 19397 5396045 YP_001383665.1 CDS CLB_1338 NC_009697.1 1397877 1398770 D identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762; DegV family protein 1397877..1398770 Clostridium botulinum A str. ATCC 19397 5396947 YP_001383666.1 CDS CLB_1339 NC_009697.1 1398807 1399271 R identified by match to protein family HMM PF01243; 5-nitroimidazole antibiotic resistance protein complement(1398807..1399271) Clostridium botulinum A str. ATCC 19397 5396508 YP_001383667.1 CDS CLB_1340 NC_009697.1 1399584 1399811 D identified by similarity to SP:Q8K9S1; hypothetical protein 1399584..1399811 Clostridium botulinum A str. ATCC 19397 5397061 YP_001383668.1 CDS CLB_1341 NC_009697.1 1399836 1400264 D identified by match to protein family HMM PF01230; HIT family protein 1399836..1400264 Clostridium botulinum A str. ATCC 19397 5396851 YP_001383669.1 CDS CLB_1342 NC_009697.1 1400420 1400794 R hypothetical protein complement(1400420..1400794) Clostridium botulinum A str. ATCC 19397 5396701 YP_001383670.1 CDS CLB_1343 NC_009697.1 1401087 1401854 D identified by match to protein family HMM PF01478; match to protein family HMM PF06750; type IV leader peptidase family protein 1401087..1401854 Clostridium botulinum A str. ATCC 19397 5396393 YP_001383671.1 CDS CLB_1344 NC_009697.1 1402446 1403573 D identified by match to protein family HMM PF07907; hypothetical protein 1402446..1403573 Clostridium botulinum A str. ATCC 19397 5398137 YP_001383672.1 CDS trkA NC_009697.1 1404361 1405728 D involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 1404361..1405728 Clostridium botulinum A str. ATCC 19397 5396832 YP_001383673.1 CDS trkH NC_009697.1 1405725 1407170 D identified by match to protein family HMM PF02386; Trk system potassium uptake protein TrkH 1405725..1407170 Clostridium botulinum A str. ATCC 19397 5395398 YP_001383674.1 CDS CLB_1347 NC_009697.1 1407629 1407763 D identified by Glimmer3; hypothetical protein 1407629..1407763 Clostridium botulinum A str. ATCC 19397 5395596 YP_001383675.1 CDS CLB_1348 NC_009697.1 1407744 1410311 D identified by match to protein family HMM PF00580; match to protein family HMM PF00929; match to protein family HMM TIGR00573; helicase, UvrD/REP/exonuclease family protein 1407744..1410311 Clostridium botulinum A str. ATCC 19397 5397844 YP_001383676.1 CDS CLB_1349 NC_009697.1 1411614 1412744 R identified by match to protein family HMM PF07853; hypothetical protein complement(1411614..1412744) Clostridium botulinum A str. ATCC 19397 5397883 YP_001383677.1 CDS CLB_1350 NC_009697.1 1412759 1413133 R identified by match to protein family HMM PF00392; GntR family transcriptional regulator complement(1412759..1413133) Clostridium botulinum A str. ATCC 19397 5397011 YP_001383678.1 CDS CLB_1351 NC_009697.1 1413475 1414254 R identified by match to protein family HMM PF01476; match to protein family HMM PF07486; cell wall hydrolase complement(1413475..1414254) Clostridium botulinum A str. ATCC 19397 5397140 YP_001383679.1 CDS rbr NC_009697.1 1415013 1415600 D identified by match to protein family HMM PF02915; rubrerythrin 1415013..1415600 Clostridium botulinum A str. ATCC 19397 5397524 YP_001383680.1 CDS CLB_1353 NC_009697.1 1415895 1417349 D identified by match to protein family HMM PF04122; amidase 1415895..1417349 Clostridium botulinum A str. ATCC 19397 5396779 YP_001383681.1 CDS ptsG NC_009697.1 1417522 1419552 R identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR00830; match to protein family HMM TIGR02002; PTS system glucose-specific transporter subunit IIABC complement(1417522..1419552) Clostridium botulinum A str. ATCC 19397 5397961 YP_001383682.1 CDS CLB_1355 NC_009697.1 1420004 1420651 D identified by match to protein family HMM PF01255; UDP pyrophosphate synthetase-like protein 1420004..1420651 Clostridium botulinum A str. ATCC 19397 5395927 YP_001383683.1 CDS CLB_1356 NC_009697.1 1420942 1421598 R identified by Glimmer3; hypothetical protein complement(1420942..1421598) Clostridium botulinum A str. ATCC 19397 5395943 YP_001383684.1 CDS CLB_1357 NC_009697.1 1421038 1421547 D identified by Glimmer3; hypothetical protein 1421038..1421547 Clostridium botulinum A str. ATCC 19397 5396575 YP_001383685.1 CDS CLB_1358 NC_009697.1 1421842 1422255 D identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; transcriptional regulator 1421842..1422255 Clostridium botulinum A str. ATCC 19397 5396484 YP_001383686.1 CDS CLB_1359 NC_009697.1 1422464 1424350 D identified by match to protein family HMM PF03063; match to protein family HMM TIGR01702; carbon monoxide dehydrogenase 1422464..1424350 Clostridium botulinum A str. ATCC 19397 5398162 YP_001383687.1 CDS CLB_1360 NC_009697.1 1424497 1424940 D identified by match to protein family HMM PF00037; nitrate reductase, iron-sulfur subunit 1424497..1424940 Clostridium botulinum A str. ATCC 19397 5394916 YP_001383688.1 CDS noxA NC_009697.1 1425139 1426365 D identified by match to protein family HMM PF00070; match to protein family HMM PF07992; nitrate reductase, NADH oxidase subunit 1425139..1426365 Clostridium botulinum A str. ATCC 19397 5395041 YP_001383689.1 CDS CLB_1362 NC_009697.1 1426407 1427387 R identified by match to protein family HMM PF00892; match to protein family HMM PF03151; transporter complement(1426407..1427387) Clostridium botulinum A str. ATCC 19397 5396073 YP_001383690.1 CDS CLB_1363 NC_009697.1 1427769 1428455 R identified by match to protein family HMM PF00027; match to protein family HMM PF00325; Crp/FNR family transcriptional regulator complement(1427769..1428455) Clostridium botulinum A str. ATCC 19397 5395534 YP_001383691.1 CDS CLB_1364 NC_009697.1 1428572 1429771 D identified by match to protein family HMM PF07690; major facilitator superfamily protein 1428572..1429771 Clostridium botulinum A str. ATCC 19397 5394712 YP_001383692.1 CDS CLB_1365 NC_009697.1 1430074 1430988 D identified by match to protein family HMM PF01497; iron ABC transporter substrate-binding protein 1430074..1430988 Clostridium botulinum A str. ATCC 19397 5397912 YP_001383693.1 CDS CLB_1366 NC_009697.1 1431010 1432008 D identified by match to protein family HMM PF01032; iron ABC transporter permease 1431010..1432008 Clostridium botulinum A str. ATCC 19397 5394631 YP_001383694.1 CDS CLB_1367 NC_009697.1 1432011 1432772 D identified by match to protein family HMM PF00005; iron ABC transporter ATP-binding protein 1432011..1432772 Clostridium botulinum A str. ATCC 19397 5396149 YP_001383695.1 CDS CLB_1368 NC_009697.1 1432993 1433328 R hypothetical protein complement(1432993..1433328) Clostridium botulinum A str. ATCC 19397 5396210 YP_001383696.1 CDS CLB_1369 NC_009697.1 1433403 1434680 R identified by match to protein family HMM PF00037; (Fe-S)-binding protein complement(1433403..1434680) Clostridium botulinum A str. ATCC 19397 5396475 YP_001383697.1 CDS CLB_1370 NC_009697.1 1435087 1435932 D identified by match to protein family HMM PF01380; match to protein family HMM PF01418; RpiR family transcriptional regulator 1435087..1435932 Clostridium botulinum A str. ATCC 19397 5396717 YP_001383698.1 CDS murQ NC_009697.1 1436212 1437120 D catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase 1436212..1437120 Clostridium botulinum A str. ATCC 19397 5397556 YP_001383699.1 CDS CLB_1372 NC_009697.1 1437233 1438588 D identified by match to protein family HMM PF00367; match to protein family HMM PF02378; PTS system transporter subunit IIBC 1437233..1438588 Clostridium botulinum A str. ATCC 19397 5395882 YP_001383700.1 CDS CLB_1373 NC_009697.1 1439012 1440088 D identified by match to protein family HMM PF05913; hypothetical protein 1439012..1440088 Clostridium botulinum A str. ATCC 19397 5395357 YP_001383701.1 CDS CLB_1374 NC_009697.1 1440420 1441028 D identified by match to protein family HMM PF06475; hypothetical protein 1440420..1441028 Clostridium botulinum A str. ATCC 19397 5397910 YP_001383702.1 CDS CLB_1375 NC_009697.1 1441311 1441952 D identified by match to protein family HMM PF06555; hypothetical protein 1441311..1441952 Clostridium botulinum A str. ATCC 19397 5396223 YP_001383703.1 CDS CLB_1376 NC_009697.1 1442258 1444129 D hypothetical protein 1442258..1444129 Clostridium botulinum A str. ATCC 19397 5396117 YP_001383704.1 CDS CLB_1377 NC_009697.1 1444182 1445420 D cell-surface protein 1444182..1445420 Clostridium botulinum A str. ATCC 19397 5396870 YP_001383705.1 CDS CLB_1378 NC_009697.1 1445420 1445962 D identified by Glimmer3; hypothetical protein 1445420..1445962 Clostridium botulinum A str. ATCC 19397 5397623 YP_001383706.1 CDS CLB_1379 NC_009697.1 1446132 1446404 R hypothetical protein complement(1446132..1446404) Clostridium botulinum A str. ATCC 19397 5394540 YP_001383707.1 CDS CLB_1380 NC_009697.1 1446908 1448626 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein 1446908..1448626 Clostridium botulinum A str. ATCC 19397 5394658 YP_001383708.1 CDS CLB_1381 NC_009697.1 1449084 1450673 D identified by match to protein family HMM PF00496; peptide/opine/nickel uptake ABC transporter substrate-binding protein 1449084..1450673 Clostridium botulinum A str. ATCC 19397 5396081 YP_001383709.1 CDS CLB_1382 NC_009697.1 1450670 1451626 D identified by match to protein family HMM PF00528; peptide/opine/nickel uptake ABC transporter permease 1450670..1451626 Clostridium botulinum A str. ATCC 19397 5397661 YP_001383710.1 CDS CLB_1383 NC_009697.1 1451635 1452435 D identified by match to protein family HMM PF00528; peptide/opine/nickel uptake ABC transporter permease 1451635..1452435 Clostridium botulinum A str. ATCC 19397 5395950 YP_001383711.1 CDS CLB_1384 NC_009697.1 1452534 1453328 D identified by match to protein family HMM PF00005; peptide/opine/nickel uptake ABC transporter ATP-binding protein 1452534..1453328 Clostridium botulinum A str. ATCC 19397 5395315 YP_001383712.1 CDS CLB_1385 NC_009697.1 1453322 1454134 D identified by match to protein family HMM PF00005; peptide/opine/nickel uptake ABC transporter ATP-binding protein 1453322..1454134 Clostridium botulinum A str. ATCC 19397 5394699 YP_001383713.1 CDS CLB_1386 NC_009697.1 1454578 1455090 D lipoprotein 1454578..1455090 Clostridium botulinum A str. ATCC 19397 5395774 YP_001383714.1 CDS CLB_1387 NC_009697.1 1455383 1456171 R identified by match to protein family HMM PF00950; manganese/zinc/iron chelate ABC transporter permease complement(1455383..1456171) Clostridium botulinum A str. ATCC 19397 5396637 YP_001383715.1 CDS CLB_1388 NC_009697.1 1456171 1456824 R identified by match to protein family HMM PF00005; manganese/zinc/iron chelate ABC transporter ATP-binding protein complement(1456171..1456824) Clostridium botulinum A str. ATCC 19397 5396228 YP_001383716.1 CDS CLB_1389 NC_009697.1 1457045 1457983 D identified by match to protein family HMM PF01297; manganese/zinc/iron chelate ABC transporter substrate-binding protein 1457045..1457983 Clostridium botulinum A str. ATCC 19397 5396969 YP_001383717.1 CDS CLB_1390 NC_009697.1 1458097 1458588 R hypothetical protein complement(1458097..1458588) Clostridium botulinum A str. ATCC 19397 5396290 YP_001383718.1 CDS CLB_1391 NC_009697.1 1459191 1460957 D identified by match to protein family HMM PF00271; helicase 1459191..1460957 Clostridium botulinum A str. ATCC 19397 5396417 YP_001383719.1 CDS CLB_1392 NC_009697.1 1461092 1461640 D identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase 1461092..1461640 Clostridium botulinum A str. ATCC 19397 5396220 YP_001383720.1 CDS CLB_1393 NC_009697.1 1462553 1463560 D lipoprotein 1462553..1463560 Clostridium botulinum A str. ATCC 19397 5397827 YP_001383721.1 CDS CLB_1394 NC_009697.1 1463532 1464293 D identified by match to protein family HMM PF00528; ABC transporter permease 1463532..1464293 Clostridium botulinum A str. ATCC 19397 5395972 YP_001383722.1 CDS CLB_1395 NC_009697.1 1464434 1465033 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1464434..1465033 Clostridium botulinum A str. ATCC 19397 5395470 YP_001383723.1 CDS CLB_1396 NC_009697.1 1465312 1465785 D identified by match to protein family HMM PF01475; FUR family transcriptional regulator 1465312..1465785 Clostridium botulinum A str. ATCC 19397 5397421 YP_001383724.1 CDS CLB_1397 NC_009697.1 1465755 1466228 D identified by match to protein family HMM PF02001; hypothetical protein 1465755..1466228 Clostridium botulinum A str. ATCC 19397 5397764 YP_001383725.1 CDS CLB_1398 NC_009697.1 1466355 1467626 D identified by match to protein family HMM PF00246; match to protein family HMM PF01471; match to protein family HMM PF01476; zinc carboxypeptidase family protein 1466355..1467626 Clostridium botulinum A str. ATCC 19397 5395368 YP_001383726.1 CDS CLB_1399 NC_009697.1 1467671 1467787 D identified by Glimmer3; hypothetical protein 1467671..1467787 Clostridium botulinum A str. ATCC 19397 5397328 YP_001383727.1 CDS rnz NC_009697.1 1467916 1468956 D member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z 1467916..1468956 Clostridium botulinum A str. ATCC 19397 5395692 YP_001383728.1 CDS CLB_1401 NC_009697.1 1469302 1470621 D identified by match to protein family HMM PF00324; amino acid permease 1469302..1470621 Clostridium botulinum A str. ATCC 19397 5395720 YP_001383729.1 CDS CLB_1402 NC_009697.1 1470766 1471143 D identified by match to protein family HMM PF08000; hypothetical protein 1470766..1471143 Clostridium botulinum A str. ATCC 19397 5396887 YP_001383730.1 CDS CLB_1403 NC_009697.1 1471156 1472313 D identified by match to protein family HMM PF02518; match to protein family HMM PF07730; sensor histidine kinase 1471156..1472313 Clostridium botulinum A str. ATCC 19397 5396711 YP_001383731.1 CDS CLB_1404 NC_009697.1 1472496 1473149 D identified by match to protein family HMM PF00072; match to protein family HMM PF00196; LuxR family DNA-binding response regulator 1472496..1473149 Clostridium botulinum A str. ATCC 19397 5397088 YP_001383732.1 CDS CLB_1405 NC_009697.1 1473500 1474438 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1473500..1474438 Clostridium botulinum A str. ATCC 19397 5395115 YP_001383733.1 CDS CLB_1406 NC_009697.1 1474544 1475722 D ABC transporter permease 1474544..1475722 Clostridium botulinum A str. ATCC 19397 5396353 YP_001383734.1 CDS CLB_1407 NC_009697.1 1475724 1476824 D identified by match to protein family HMM PF01061; hypothetical protein 1475724..1476824 Clostridium botulinum A str. ATCC 19397 5396923 YP_001383735.1 CDS CLB_1408 NC_009697.1 1476843 1477061 D identified by Glimmer3; hypothetical protein 1476843..1477061 Clostridium botulinum A str. ATCC 19397 5394930 YP_001383736.1 CDS CLB_1409 NC_009697.1 1477752 1478303 R identified by match to protein family HMM PF00881; nitroreductase family protein complement(1477752..1478303) Clostridium botulinum A str. ATCC 19397 5397551 YP_001383737.1 CDS CLB_1410 NC_009697.1 1478861 1479352 R hypothetical protein complement(1478861..1479352) Clostridium botulinum A str. ATCC 19397 5394725 YP_001383738.1 CDS CLB_1411 NC_009697.1 1479520 1479723 R identified by match to protein family HMM PF00313; major cold shock protein complement(1479520..1479723) Clostridium botulinum A str. ATCC 19397 5395834 YP_001383739.1 CDS pepD-1 NC_009697.1 1479990 1481453 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893; aminoacyl-histidine dipeptidase 1479990..1481453 Clostridium botulinum A str. ATCC 19397 5395087 YP_001383740.1 CDS CLB_1413 NC_009697.1 1481511 1482404 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 1481511..1482404 Clostridium botulinum A str. ATCC 19397 5394861 YP_001383741.1 CDS pdxK NC_009697.1 1482802 1483638 D catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxamine kinase 1482802..1483638 Clostridium botulinum A str. ATCC 19397 5395418 YP_001383742.1 CDS CLB_1415 NC_009697.1 1483926 1484564 R identified by match to protein family HMM PF01625; methionine-S-sulfoxide reductase complement(1483926..1484564) Clostridium botulinum A str. ATCC 19397 5396311 YP_001383743.1 CDS CLB_1416 NC_009697.1 1485114 1485878 D identified by match to protein family HMM PF00005; peptide ABC transporter ATP-binding protein 1485114..1485878 Clostridium botulinum A str. ATCC 19397 5394856 YP_001383744.1 CDS CLB_1417 NC_009697.1 1485865 1487754 D identified by match to protein family HMM PF02687; peptide ABC transporter permease 1485865..1487754 Clostridium botulinum A str. ATCC 19397 5396773 YP_001383745.1 CDS CLB_1418 NC_009697.1 1487927 1488424 D hypothetical protein 1487927..1488424 Clostridium botulinum A str. ATCC 19397 5394698 YP_001383746.1 CDS CLB_1419 NC_009697.1 1488864 1489565 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1488864..1489565 Clostridium botulinum A str. ATCC 19397 5396271 YP_001383747.1 CDS CLB_1420 NC_009697.1 1489567 1490544 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 1489567..1490544 Clostridium botulinum A str. ATCC 19397 5395296 YP_001383748.1 CDS CLB_1421 NC_009697.1 1490603 1491358 D identified by match to protein family HMM PF00005; peptide ABC transporter ATP-binding protein 1490603..1491358 Clostridium botulinum A str. ATCC 19397 5397528 YP_001383749.1 CDS CLB_1422 NC_009697.1 1491348 1493156 D peptide ABC transporter permease 1491348..1493156 Clostridium botulinum A str. ATCC 19397 5396699 YP_001383750.1 CDS CLB_1423 NC_009697.1 1493225 1493947 D hypothetical protein 1493225..1493947 Clostridium botulinum A str. ATCC 19397 5396729 YP_001383751.1 CDS CLB_1424 NC_009697.1 1494326 1495327 D hypothetical protein 1494326..1495327 Clostridium botulinum A str. ATCC 19397 5396876 YP_001383752.1 CDS CLB_1425 NC_009697.1 1495687 1496889 D identified by match to protein family HMM PF00155; aminotransferase, classes I and II 1495687..1496889 Clostridium botulinum A str. ATCC 19397 5397277 YP_001383753.1 CDS CLB_1426 NC_009697.1 1496977 1497642 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease 1496977..1497642 Clostridium botulinum A str. ATCC 19397 5397980 YP_001383754.1 CDS CLB_1427 NC_009697.1 1497661 1498398 D identified by match to protein family HMM PF00005; polar amino acid ABC transporter ATP-binding protein 1497661..1498398 Clostridium botulinum A str. ATCC 19397 5395651 YP_001383755.1 CDS CLB_1428 NC_009697.1 1498823 1499041 D identified by match to protein family HMM PF01381; DNA-binding protein 1498823..1499041 Clostridium botulinum A str. ATCC 19397 5398088 YP_001383756.1 CDS CLB_1429 NC_009697.1 1499240 1500514 R identified by match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase complement(1499240..1500514) Clostridium botulinum A str. ATCC 19397 5395708 YP_001383757.1 CDS CLB_1430 NC_009697.1 1500813 1501436 D identified by match to protein family HMM PF00293; MutT/NUDIX NTP pyrophosphatase 1500813..1501436 Clostridium botulinum A str. ATCC 19397 5396603 YP_001383758.1 CDS CLB_1431 NC_009697.1 1501487 1501834 R hypothetical protein complement(1501487..1501834) Clostridium botulinum A str. ATCC 19397 5395583 YP_001383759.1 CDS CLB_1432 NC_009697.1 1502170 1503333 D identified by match to protein family HMM PF00465; NADH-dependent butanol dehydrogenase 1502170..1503333 Clostridium botulinum A str. ATCC 19397 5397489 YP_001383760.1 CDS CLB_1433 NC_009697.1 1503717 1503941 D identified by Glimmer3; hypothetical protein 1503717..1503941 Clostridium botulinum A str. ATCC 19397 5398123 YP_001383761.1 CDS CLB_1434 NC_009697.1 1504114 1505634 D identified by match to protein family HMM PF03600; match to protein family HMM PF03606; match to protein family HMM PF06808; C4-dicarboxylate transporter 1504114..1505634 Clostridium botulinum A str. ATCC 19397 5396049 YP_001383762.1 CDS CLB_1435 NC_009697.1 1505773 1507254 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(1505773..1507254) Clostridium botulinum A str. ATCC 19397 5396838 YP_001383763.1 CDS CLB_1436 NC_009697.1 1507711 1508517 D identified by match to protein family HMM PF00497; polar amino acid ABC transporter amino acid-binding protein 1507711..1508517 Clostridium botulinum A str. ATCC 19397 5397833 YP_001383764.1 CDS CLB_1437 NC_009697.1 1508519 1509178 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease 1508519..1509178 Clostridium botulinum A str. ATCC 19397 5394676 YP_001383765.1 CDS CLB_1438 NC_009697.1 1509309 1509857 D hypothetical protein 1509309..1509857 Clostridium botulinum A str. ATCC 19397 5398190 YP_001383766.1 CDS CLB_1439 NC_009697.1 1509952 1511964 D identified by match to protein family HMM PF00580; ATP-dependent DNA helicase PcrA 1509952..1511964 Clostridium botulinum A str. ATCC 19397 5397254 YP_001383767.1 CDS CLB_1440 NC_009697.1 1512352 1512735 D hypothetical protein 1512352..1512735 Clostridium botulinum A str. ATCC 19397 5395401 YP_001383768.1 CDS CLB_1441 NC_009697.1 1512741 1513091 D hypothetical protein 1512741..1513091 Clostridium botulinum A str. ATCC 19397 5397060 YP_001383769.1 CDS CLB_1442 NC_009697.1 1513223 1513381 D identified by Glimmer3; hypothetical protein 1513223..1513381 Clostridium botulinum A str. ATCC 19397 5397012 YP_001383770.1 CDS CLB_1443 NC_009697.1 1513491 1513898 D identified by match to protein family HMM PF00583; acetyltransferase 1513491..1513898 Clostridium botulinum A str. ATCC 19397 5396815 YP_001383771.1 CDS CLB_1444 NC_009697.1 1514060 1514539 D identified by Glimmer3; hypothetical protein 1514060..1514539 Clostridium botulinum A str. ATCC 19397 5397659 YP_001383772.1 CDS CLB_1445 NC_009697.1 1514631 1514786 D identified by Glimmer3; hypothetical protein 1514631..1514786 Clostridium botulinum A str. ATCC 19397 5395292 YP_001383773.1 CDS CLB_1446 NC_009697.1 1515062 1515256 D identified by Glimmer3; hypothetical protein 1515062..1515256 Clostridium botulinum A str. ATCC 19397 5395852 YP_001383774.1 CDS uviB NC_009697.1 1515480 1515683 D bacteriocin UviB 1515480..1515683 Clostridium botulinum A str. ATCC 19397 5396803 YP_001383775.1 CDS CLB_1448 NC_009697.1 1515676 1515858 D hypothetical protein 1515676..1515858 Clostridium botulinum A str. ATCC 19397 5397267 YP_001383776.1 CDS CLB_1449 NC_009697.1 1515858 1516685 D identified by match to protein family HMM PF01471; match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase 1515858..1516685 Clostridium botulinum A str. ATCC 19397 5395652 YP_001383777.1 CDS CLB_1450 NC_009697.1 1517053 1517271 D hypothetical protein 1517053..1517271 Clostridium botulinum A str. ATCC 19397 5394961 YP_001383778.1 CDS CLB_1451 NC_009697.1 1517273 1517578 D identified by match to protein family HMM PF07875; spore coat protein-like protein 1517273..1517578 Clostridium botulinum A str. ATCC 19397 5396928 YP_001383779.1 CDS CLB_1452 NC_009697.1 1518237 1519214 D identified by Glimmer3; hypothetical protein 1518237..1519214 Clostridium botulinum A str. ATCC 19397 5397800 YP_001383780.1 CDS CLB_1453 NC_009697.1 1519598 1519996 D identified by Glimmer3; hypothetical protein 1519598..1519996 Clostridium botulinum A str. ATCC 19397 5395497 YP_001383781.1 CDS CLB_1454 NC_009697.1 1520347 1520649 D identified by Glimmer3; hypothetical protein 1520347..1520649 Clostridium botulinum A str. ATCC 19397 5395011 YP_001383782.1 CDS CLB_1455 NC_009697.1 1520852 1523080 D identified by match to protein family HMM PF02491; cell division protein FtsA 1520852..1523080 Clostridium botulinum A str. ATCC 19397 5396258 YP_001383783.1 CDS CLB_1456 NC_009697.1 1523300 1524478 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; amidohydrolase 1523300..1524478 Clostridium botulinum A str. ATCC 19397 5396057 YP_001383784.1 CDS CLB_1457 NC_009697.1 1524534 1525385 D identified by match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase 1524534..1525385 Clostridium botulinum A str. ATCC 19397 5394962 YP_001383785.1 CDS CLB_1458 NC_009697.1 1525865 1526818 D identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; RluA family pseudouridine synthase 1525865..1526818 Clostridium botulinum A str. ATCC 19397 5397600 YP_001383786.1 CDS spoVB-1 NC_009697.1 1526850 1528457 D identified by match to protein family HMM PF01554; match to protein family HMM PF01943; match to protein family HMM PF03023; stage V sporulation protein B 1526850..1528457 Clostridium botulinum A str. ATCC 19397 5395976 YP_001383787.1 CDS CLB_1460 NC_009697.1 1528494 1529999 R identified by match to protein family HMM PF01554; match to protein family HMM PF01943; match to protein family HMM TIGR02900; polysaccharide biosynthesis family protein complement(1528494..1529999) Clostridium botulinum A str. ATCC 19397 5397252 YP_001383788.1 CDS CLB_1461 NC_009697.1 1530332 1530895 D hypothetical protein 1530332..1530895 Clostridium botulinum A str. ATCC 19397 5397094 YP_001383789.1 CDS CLB_1462 NC_009697.1 1530916 1531323 R hypothetical protein complement(1530916..1531323) Clostridium botulinum A str. ATCC 19397 5397070 YP_001383790.1 CDS CLB_1463 NC_009697.1 1532422 1533621 D identified by match to protein family HMM PF00465; alcohol dehydrogenase 1532422..1533621 Clostridium botulinum A str. ATCC 19397 5397811 YP_001383791.1 CDS CLB_1464 NC_009697.1 1533982 1536300 D identified by match to protein family HMM PF05362; ATP-dependent protease 1533982..1536300 Clostridium botulinum A str. ATCC 19397 5395516 YP_001383792.1 CDS npr-1 NC_009697.1 1537641 1539368 R identified by match to protein family HMM PF01447; match to protein family HMM PF02868; match to protein family HMM PF03413; thermolysin metallopeptidase complement(1537641..1539368) Clostridium botulinum A str. ATCC 19397 5395301 YP_001383793.1 CDS npr-2 NC_009697.1 1539505 1541283 R identified by match to protein family HMM PF01447; match to protein family HMM PF02868; match to protein family HMM PF03413; thermolysin metallopeptidase complement(1539505..1541283) Clostridium botulinum A str. ATCC 19397 5395630 YP_001383794.1 CDS npr-3 NC_009697.1 1541399 1543192 R identified by match to protein family HMM PF01447; match to protein family HMM PF02868; match to protein family HMM PF03413; thermolysin metallopeptidase complement(1541399..1543192) Clostridium botulinum A str. ATCC 19397 5397580 YP_001383795.1 CDS npr-4 NC_009697.1 1543309 1545093 R identified by match to protein family HMM PF01447; match to protein family HMM PF02868; match to protein family HMM PF03413; thermolysin metallopeptidase complement(1543309..1545093) Clostridium botulinum A str. ATCC 19397 5396202 YP_001383796.1 CDS npr-5 NC_009697.1 1545213 1546958 R identified by match to protein family HMM PF01447; match to protein family HMM PF02868; match to protein family HMM PF03413; thermolysin metallopeptidase complement(1545213..1546958) Clostridium botulinum A str. ATCC 19397 5396667 YP_001383797.1 CDS npr-6 NC_009697.1 1546992 1548734 R identified by match to protein family HMM PF01447; match to protein family HMM PF02868; match to protein family HMM PF03413; thermolysin metallopeptidase complement(1546992..1548734) Clostridium botulinum A str. ATCC 19397 5396130 YP_001383798.1 CDS nadC NC_009697.1 1549337 1550173 R identified by match to protein family HMM PF01729; match to protein family HMM PF02749; match to protein family HMM TIGR00078; nicotinate-nucleotide pyrophosphorylase complement(1549337..1550173) Clostridium botulinum A str. ATCC 19397 5396345 YP_001383799.1 CDS nadB NC_009697.1 1550154 1551455 R catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase complement(1550154..1551455) Clostridium botulinum A str. ATCC 19397 5397894 YP_001383800.1 CDS nadA NC_009697.1 1551458 1552372 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(1551458..1552372) Clostridium botulinum A str. ATCC 19397 5396746 YP_001383801.1 CDS CLB_1475 NC_009697.1 1552744 1553670 D identified by Glimmer3; hypothetical protein 1552744..1553670 Clostridium botulinum A str. ATCC 19397 5397904 YP_001383802.1 CDS hlyIII NC_009697.1 1553767 1554405 R identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065; hemolysin III complement(1553767..1554405) Clostridium botulinum A str. ATCC 19397 5397275 YP_001383803.1 CDS ychF NC_009697.1 1554526 1555623 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(1554526..1555623) Clostridium botulinum A str. ATCC 19397 5396562 YP_001383804.1 CDS mraZ NC_009697.1 1556317 1556787 D MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 1556317..1556787 Clostridium botulinum A str. ATCC 19397 5394588 YP_001383805.1 CDS mraW NC_009697.1 1556867 1557796 D identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW 1556867..1557796 Clostridium botulinum A str. ATCC 19397 5395391 YP_001383806.1 CDS CLB_1480 NC_009697.1 1557878 1558381 D cell division protein FtsL 1557878..1558381 Clostridium botulinum A str. ATCC 19397 5396748 YP_001383807.1 CDS CLB_1481 NC_009697.1 1558397 1560577 D identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM PF03793; match to protein family HMM TIGR02214; stage V sporulation protein D 1558397..1560577 Clostridium botulinum A str. ATCC 19397 5398209 YP_001383808.1 CDS murE NC_009697.1 1560807 1562258 D involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1560807..1562258 Clostridium botulinum A str. ATCC 19397 5396221 YP_001383809.1 CDS murF NC_009697.1 1562284 1563672 D identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01143; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 1562284..1563672 Clostridium botulinum A str. ATCC 19397 5395992 YP_001383810.1 CDS mraY NC_009697.1 1563708 1564661 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1563708..1564661 Clostridium botulinum A str. ATCC 19397 5395007 YP_001383811.1 CDS CLB_1485 NC_009697.1 1564740 1565852 D identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614; match to protein family HMM TIGR02615; cell cycle protein FtsW 1564740..1565852 Clostridium botulinum A str. ATCC 19397 5395670 YP_001383812.1 CDS CLB_1486 NC_009697.1 1566171 1566941 D identified by match to protein family HMM PF08478; cell division protein FtsQ 1566171..1566941 Clostridium botulinum A str. ATCC 19397 5394830 YP_001383813.1 CDS CLB_1487 NC_009697.1 1566952 1567665 D identified by match to protein family HMM PF05949; hypothetical protein 1566952..1567665 Clostridium botulinum A str. ATCC 19397 5397671 YP_001383814.1 CDS sbp NC_009697.1 1567699 1568049 D identified by match to protein family HMM PF06947; small basic protein 1567699..1568049 Clostridium botulinum A str. ATCC 19397 5396703 YP_001383815.1 CDS CLB_1489 NC_009697.1 1568050 1568781 D identified by match to protein family HMM PF05949; hypothetical protein 1568050..1568781 Clostridium botulinum A str. ATCC 19397 5396116 YP_001383816.1 CDS CLB_1490 NC_009697.1 1568874 1569545 D identified by match to protein family HMM PF01168; match to protein family HMM TIGR00044; hypothetical protein 1568874..1569545 Clostridium botulinum A str. ATCC 19397 5394901 YP_001383817.1 CDS CLB_1491 NC_009697.1 1569566 1570018 D identified by match to protein family HMM PF04472; hypothetical protein 1569566..1570018 Clostridium botulinum A str. ATCC 19397 5395663 YP_001383818.1 CDS CLB_1492 NC_009697.1 1570035 1570310 D identified by match to protein family HMM PF02325; hypothetical protein 1570035..1570310 Clostridium botulinum A str. ATCC 19397 5397655 YP_001383819.1 CDS CLB_1493 NC_009697.1 1570311 1571081 D hypothetical protein 1570311..1571081 Clostridium botulinum A str. ATCC 19397 5397723 YP_001383820.1 CDS divIVA NC_009697.1 1571097 1571756 D identified by match to protein family HMM PF05103; cell-division initiation protein DivIVA 1571097..1571756 Clostridium botulinum A str. ATCC 19397 5397448 YP_001383821.1 CDS aroB NC_009697.1 1572164 1573252 D identified by match to protein family HMM PF01761; match to protein family HMM TIGR01357; 3-dehydroquinate synthase 1572164..1573252 Clostridium botulinum A str. ATCC 19397 5397003 YP_001383822.1 CDS mtnN NC_009697.1 1573253 1573945 D enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1573253..1573945 Clostridium botulinum A str. ATCC 19397 5395474 YP_001383823.1 CDS aroF NC_009697.1 1574066 1574866 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase 1574066..1574866 Clostridium botulinum A str. ATCC 19397 5397126 YP_001383824.1 CDS aroA NC_009697.1 1575000 1576328 D catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1575000..1576328 Clostridium botulinum A str. ATCC 19397 5397641 YP_001383825.1 CDS CLB_1499 NC_009697.1 1576545 1577168 D identified by match to protein family HMM PF01258; match to protein family HMM TIGR02890; RNA polymerase-binding protein DksA 1576545..1577168 Clostridium botulinum A str. ATCC 19397 5395205 YP_001383826.1 CDS lspA NC_009697.1 1577572 1578015 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1577572..1578015 Clostridium botulinum A str. ATCC 19397 5395934 YP_001383827.1 CDS CLB_1501 NC_009697.1 1578019 1578936 D identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; RluA family pseudouridine synthase 1578019..1578936 Clostridium botulinum A str. ATCC 19397 5398191 YP_001383828.1 CDS pyrR-1 NC_009697.1 1579423 1579959 D regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 1579423..1579959 Clostridium botulinum A str. ATCC 19397 5397985 YP_001383829.1 CDS CLB_1503 NC_009697.1 1580003 1581346 D identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; uracil permease 1580003..1581346 Clostridium botulinum A str. ATCC 19397 5395994 YP_001383830.1 CDS xth NC_009697.1 1581936 1582697 D identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease III 1581936..1582697 Clostridium botulinum A str. ATCC 19397 5396043 YP_001383831.1 CDS CLB_1505 NC_009697.1 1582920 1584062 D identified by match to protein family HMM PF01170; methyltransferase 1582920..1584062 Clostridium botulinum A str. ATCC 19397 5395098 YP_001383832.1 CDS CLB_1506 NC_009697.1 1584293 1584838 D identified by Glimmer3; hypothetical protein 1584293..1584838 Clostridium botulinum A str. ATCC 19397 5395045 YP_001383833.1 CDS modA NC_009697.1 1585016 1585831 D identified by match to protein family HMM PF01547; match to protein family HMM TIGR01256; molybdate ABC transporter periplasmic molybdate-binding protein 1585016..1585831 Clostridium botulinum A str. ATCC 19397 5394965 YP_001383834.1 CDS modB NC_009697.1 1585841 1586512 D identified by match to protein family HMM PF00528; molybdate ABC transporter permease 1585841..1586512 Clostridium botulinum A str. ATCC 19397 5397693 YP_001383835.1 CDS CLB_1509 NC_009697.1 1586840 1587511 D identified by match to protein family HMM PF00005; molybdate ABC transporter ATP-binding protein 1586840..1587511 Clostridium botulinum A str. ATCC 19397 5396854 YP_001383836.1 CDS CLB_1510 NC_009697.1 1587565 1588125 D hypothetical protein 1587565..1588125 Clostridium botulinum A str. ATCC 19397 5394896 YP_001383837.1 CDS CLB_1511 NC_009697.1 1588507 1589430 D identified by match to protein family HMM PF01734; patatin-like phospholipase family protein 1588507..1589430 Clostridium botulinum A str. ATCC 19397 5397759 YP_001383838.1 CDS CLB_1512 NC_009697.1 1589730 1589885 D hypothetical protein 1589730..1589885 Clostridium botulinum A str. ATCC 19397 5396590 YP_001383839.1 CDS CLB_1513 NC_009697.1 1590158 1591210 D identified by match to protein family HMM PF01208; methylcobalamin:coenzyme M methyltransferase 1590158..1591210 Clostridium botulinum A str. ATCC 19397 5396295 YP_001383840.1 CDS CLB_1514 NC_009697.1 1591298 1592695 D identified by match to protein family HMM PF03553; Na+/H+ antiporter family protein 1591298..1592695 Clostridium botulinum A str. ATCC 19397 5394652 YP_001383841.1 CDS CLB_1515 NC_009697.1 1592837 1594567 D identified by match to protein family HMM PF00111; (Fe-S)-binding protein 1592837..1594567 Clostridium botulinum A str. ATCC 19397 5397202 YP_001383842.1 CDS CLB_1516 NC_009697.1 1594657 1595586 D identified by match to protein family HMM PF02492; CobW/P47K family protein 1594657..1595586 Clostridium botulinum A str. ATCC 19397 5395365 YP_001383843.1 CDS CLB_1517 NC_009697.1 1595609 1596481 D identified by match to protein family HMM PF01208; methylcobalamin:coenzyme M methyltransferase 1595609..1596481 Clostridium botulinum A str. ATCC 19397 5397717 YP_001383844.1 CDS mtbC NC_009697.1 1596507 1597169 D identified by match to protein family HMM PF02310; match to protein family HMM PF02607; match to protein family HMM TIGR02370; dimethylamine corrinoid protein 1596507..1597169 Clostridium botulinum A str. ATCC 19397 5395602 YP_001383845.1 CDS CLB_1519 NC_009697.1 1597254 1598276 D catalyze the formation of methyl-coenzyme M from methylcobalamin and coenzyme M; methylcobalamin:coenzyme M methyltransferase 1597254..1598276 Clostridium botulinum A str. ATCC 19397 5397130 YP_001383846.1 CDS CLB_1520 NC_009697.1 1599222 1600292 D identified by match to protein family HMM PF01208; methylcobalamin:coenzyme M methyltransferase 1599222..1600292 Clostridium botulinum A str. ATCC 19397 5396382 YP_001383847.1 CDS CLB_1521 NC_009697.1 1600315 1601277 D identified by match to protein family HMM PF00005; methionine ABC transporter ATP-binding protein 1600315..1601277 Clostridium botulinum A str. ATCC 19397 5395235 YP_001383848.1 CDS CLB_1522 NC_009697.1 1601279 1601935 D identified by match to protein family HMM PF00528; methionine ABC transporter permease 1601279..1601935 Clostridium botulinum A str. ATCC 19397 5397222 YP_001383849.1 CDS CLB_1523 NC_009697.1 1602079 1602897 D identified by match to protein family HMM PF03180; NLPA family lipoprotein 1602079..1602897 Clostridium botulinum A str. ATCC 19397 5396839 YP_001383850.1 CDS CLB_1524 NC_009697.1 1602988 1603557 R identified by match to protein family HMM PF02493; MORN repeat-containing protein complement(1602988..1603557) Clostridium botulinum A str. ATCC 19397 5395218 YP_001383851.1 CDS CLB_1525 NC_009697.1 1604135 1605154 D identified by match to protein family HMM PF00724; FAD/FMN-binding oxidoreductase 1604135..1605154 Clostridium botulinum A str. ATCC 19397 5396553 YP_001383852.1 CDS asnA NC_009697.1 1605483 1606505 D catalyzes the formation of asparagine from aspartate and ammonia; asparagine synthetase AsnA 1605483..1606505 Clostridium botulinum A str. ATCC 19397 5396529 YP_001383853.1 CDS CLB_1527 NC_009697.1 1606614 1608179 R identified by match to protein family HMM PF00355; match to protein family HMM PF01266; oxidoreductase, FAD dependent complement(1606614..1608179) Clostridium botulinum A str. ATCC 19397 5397204 YP_001383854.1 CDS CLB_1528 NC_009697.1 1608534 1610393 D identified by match to protein family HMM PF01131; match to protein family HMM PF01751; DNA topoisomerase 1608534..1610393 Clostridium botulinum A str. ATCC 19397 5394943 YP_001383855.1 CDS CLB_1529 NC_009697.1 1610420 1612333 D identified by match to protein family HMM PF00488; MutS domain-containing protein 1610420..1612333 Clostridium botulinum A str. ATCC 19397 5396293 YP_001383856.1 CDS CLB_1530 NC_009697.1 1612650 1613786 D identified by match to protein family HMM PF00037; match to protein family HMM PF00248; aldo/keto reductase 1612650..1613786 Clostridium botulinum A str. ATCC 19397 5396819 YP_001383857.1 CDS CLB_1531 NC_009697.1 1613844 1614335 R identified by match to protein family HMM PF04073; hypothetical protein complement(1613844..1614335) Clostridium botulinum A str. ATCC 19397 5395676 YP_001383858.1 CDS CLB_1532 NC_009697.1 1614572 1615270 D identified by match to protein family HMM PF00005; peptide ABC transporter ATP-binding protein 1614572..1615270 Clostridium botulinum A str. ATCC 19397 5396723 YP_001383859.1 CDS CLB_1534 NC_009697.1 1617494 1618117 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1617494..1618117 Clostridium botulinum A str. ATCC 19397 5395343 YP_001383860.1 CDS CLB_1535 NC_009697.1 1618479 1619030 D hypothetical protein 1618479..1619030 Clostridium botulinum A str. ATCC 19397 5397257 YP_001383861.1 CDS CLB_1536 NC_009697.1 1619043 1620140 D identified by match to protein family HMM PF00005; carbohydrate ABC transporter ATP-binding protein 1619043..1620140 Clostridium botulinum A str. ATCC 19397 5395742 YP_001383862.1 CDS CLB_1537 NC_009697.1 1620133 1621026 D identified by match to protein family HMM PF00528; carbohydrate ABC transporter permease 1620133..1621026 Clostridium botulinum A str. ATCC 19397 5397771 YP_001383863.1 CDS CLB_1538 NC_009697.1 1621062 1621886 D identified by match to protein family HMM PF00528; carbohydrate ABC transporter permease 1621062..1621886 Clostridium botulinum A str. ATCC 19397 5395471 YP_001383864.1 CDS CLB_1539 NC_009697.1 1621932 1623293 D identified by match to protein family HMM PF01547; carbohydrate ABC transporter periplasmic-binding protein 1621932..1623293 Clostridium botulinum A str. ATCC 19397 5394609 YP_001383865.1 CDS ldh NC_009697.1 1623517 1624473 R identified by match to protein family HMM PF00056; match to protein family HMM PF02866; match to protein family HMM TIGR01771; L-lactate dehydrogenase complement(1623517..1624473) Clostridium botulinum A str. ATCC 19397 5397512 YP_001383866.1 CDS CLB_1541 NC_009697.1 1625003 1625713 D identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 1625003..1625713 Clostridium botulinum A str. ATCC 19397 5397181 YP_001383867.1 CDS CLB_1542 NC_009697.1 1626160 1626648 R identified by match to protein family HMM TIGR01909; redox family protein complement(1626160..1626648) Clostridium botulinum A str. ATCC 19397 5395369 YP_001383868.1 CDS CLB_1543 NC_009697.1 1626882 1627829 D identified by match to protein family HMM PF03595; C4-dicarboxylate transporter/malic acid transport protein 1626882..1627829 Clostridium botulinum A str. ATCC 19397 5396621 YP_001383869.1 CDS CLB_1544 NC_009697.1 1627901 1628053 R identified by Glimmer3; hypothetical protein complement(1627901..1628053) Clostridium botulinum A str. ATCC 19397 5397381 YP_001383870.1 CDS CLB_1545 NC_009697.1 1628692 1630890 D identified by match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01966; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; sensory box-containing diguanylate cyclase 1628692..1630890 Clostridium botulinum A str. ATCC 19397 5397731 YP_001383871.1 CDS CLB_1546 NC_009697.1 1630998 1631345 D identified by match to protein family HMM PF03860; hypothetical protein 1630998..1631345 Clostridium botulinum A str. ATCC 19397 5396693 YP_001383872.1 CDS CLB_1547 NC_009697.1 1631713 1633785 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein 1631713..1633785 Clostridium botulinum A str. ATCC 19397 5396437 YP_001383873.1 CDS CLB_1548 NC_009697.1 1633991 1634458 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1633991..1634458 Clostridium botulinum A str. ATCC 19397 5395295 YP_001383874.1 CDS CLB_1549 NC_009697.1 1634485 1635027 D hypothetical protein 1634485..1635027 Clostridium botulinum A str. ATCC 19397 5397679 YP_001383875.1 CDS CLB_1550 NC_009697.1 1635176 1635529 R identified by match to protein family HMM PF01638; transcriptional regulator complement(1635176..1635529) Clostridium botulinum A str. ATCC 19397 5396618 YP_001383876.1 CDS CLB_1551 NC_009697.1 1635924 1636289 D identified by match to protein family HMM PF00903; glyoxalase family protein 1635924..1636289 Clostridium botulinum A str. ATCC 19397 5397520 YP_001383877.1 CDS ogt NC_009697.1 1636318 1636788 D Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) in DNA. Repairs alkylated guanine in DNA by stoichiometrically transferring the alkyl group at the O-6 position to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated; methylated-DNA--protein-cysteine methyltransferase 1636318..1636788 Clostridium botulinum A str. ATCC 19397 5395629 YP_001383878.1 CDS CLB_1553 NC_009697.1 1636815 1638032 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 1636815..1638032 Clostridium botulinum A str. ATCC 19397 5397046 YP_001383879.1 CDS CLB_1554 NC_009697.1 1638197 1639405 D identified by match to protein family HMM PF06792; hypothetical protein 1638197..1639405 Clostridium botulinum A str. ATCC 19397 5395646 YP_001383880.1 CDS CLB_1555 NC_009697.1 1639430 1640260 D hypothetical protein 1639430..1640260 Clostridium botulinum A str. ATCC 19397 5396573 YP_001383881.1 CDS CLB_1556 NC_009697.1 1640650 1641762 D identified by match to protein family HMM PF01381; DNA-binding protein 1640650..1641762 Clostridium botulinum A str. ATCC 19397 5397532 YP_001383882.1 CDS CLB_1557 NC_009697.1 1641790 1641957 R identified by Glimmer3; hypothetical protein complement(1641790..1641957) Clostridium botulinum A str. ATCC 19397 5397175 YP_001383883.1 CDS CLB_1558 NC_009697.1 1642070 1642444 D identified by Glimmer3; hypothetical protein 1642070..1642444 Clostridium botulinum A str. ATCC 19397 5394657 YP_001383884.1 CDS CLB_1559 NC_009697.1 1642501 1643370 D identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein 1642501..1643370 Clostridium botulinum A str. ATCC 19397 5397765 YP_001383885.1 CDS CLB_1560 NC_009697.1 1643856 1645259 D identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924; amino acid/peptide transporter 1643856..1645259 Clostridium botulinum A str. ATCC 19397 5394782 YP_001383886.1 CDS CLB_1561 NC_009697.1 1645695 1646054 D identified by match to protein family HMM PF01325; match to protein family HMM PF02742; iron-dependent repressor 1645695..1646054 Clostridium botulinum A str. ATCC 19397 5398138 YP_001383887.1 CDS CLB_1562 NC_009697.1 1646152 1646559 D hypothetical protein 1646152..1646559 Clostridium botulinum A str. ATCC 19397 5398099 YP_001383888.1 CDS CLB_1563 NC_009697.1 1646940 1647794 D identified by match to protein family HMM PF01966; match to protein family HMM PF08668; match to protein family HMM TIGR00277; HDIG domain-containing protein 1646940..1647794 Clostridium botulinum A str. ATCC 19397 5395171 YP_001383889.1 CDS CLB_1566 NC_009697.1 1648249 1650885 R identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; cation-transporting ATPase, P-type complement(1648249..1650885) Clostridium botulinum A str. ATCC 19397 5394989 YP_001383890.1 CDS CLB_1567 NC_009697.1 1651678 1652040 D identified by match to protein family HMM PF00903; glyoxalase family protein 1651678..1652040 Clostridium botulinum A str. ATCC 19397 5397235 YP_001383891.1 CDS cat-2 NC_009697.1 1652216 1652869 R identified by match to protein family HMM PF00302; chloramphenicol acetyltransferase complement(1652216..1652869) Clostridium botulinum A str. ATCC 19397 5394775 YP_001383892.1 CDS CLB_1569 NC_009697.1 1652970 1653665 D identified by match to protein family HMM PF00027; cyclic nucleotide-binding domain-containing protein 1652970..1653665 Clostridium botulinum A str. ATCC 19397 5398175 YP_001383893.1 CDS CLB_1570 NC_009697.1 1653783 1653953 D identified by match to protein family HMM PF00196; LuxR family transcriptional regulator 1653783..1653953 Clostridium botulinum A str. ATCC 19397 5395189 YP_001383894.1 CDS CLB_1571 NC_009697.1 1654013 1654699 R identified by match to protein family HMM PF06445; transcription activator effector binding domain-containing protein complement(1654013..1654699) Clostridium botulinum A str. ATCC 19397 5396225 YP_001383895.1 CDS CLB_1572 NC_009697.1 1654793 1655737 R identified by match to protein family HMM PF08220; match to protein family HMM PF08279; hypothetical protein complement(1654793..1655737) Clostridium botulinum A str. ATCC 19397 5394711 YP_001383896.1 CDS CLB_1573 NC_009697.1 1656361 1657356 D identified by match to protein family HMM PF06050; 2-hydroxyglutaryl-CoA dehydratase subunit 1656361..1657356 Clostridium botulinum A str. ATCC 19397 5395029 YP_001383897.1 CDS hgdC-1 NC_009697.1 1657473 1658234 D identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; 2-hydroxyglutaryl-CoA dehydratase subunit A 1657473..1658234 Clostridium botulinum A str. ATCC 19397 5397967 YP_001383898.1 CDS CLB_1575 NC_009697.1 1658252 1658683 D identified by match to protein family HMM PF01242; 6-pyruvoyl-tetrahydropterin synthase 1658252..1658683 Clostridium botulinum A str. ATCC 19397 5394682 YP_001383899.1 CDS CLB_1576 NC_009697.1 1658685 1659350 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 1658685..1659350 Clostridium botulinum A str. ATCC 19397 5396901 YP_001383900.1 CDS folE NC_009697.1 1659354 1659944 D involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 1659354..1659944 Clostridium botulinum A str. ATCC 19397 5397550 YP_001383901.1 CDS CLB_1578 NC_009697.1 1660128 1660787 D identified by match to protein family HMM PF06508; match to protein family HMM TIGR00364; exsB protein 1660128..1660787 Clostridium botulinum A str. ATCC 19397 5397474 YP_001383902.1 CDS CLB_1579 NC_009697.1 1660902 1661858 D identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 1660902..1661858 Clostridium botulinum A str. ATCC 19397 5395225 YP_001383903.1 CDS CLB_1580 NC_009697.1 1662033 1662785 D identified by match to protein family HMM PF06161; hypothetical protein 1662033..1662785 Clostridium botulinum A str. ATCC 19397 5395555 YP_001383904.1 CDS CLB_1581 NC_009697.1 1663107 1663526 D hypothetical protein 1663107..1663526 Clostridium botulinum A str. ATCC 19397 5395922 YP_001383905.1 CDS CLB_1582 NC_009697.1 1663548 1664486 D identified by match to protein family HMM PF04198; deoxyribonucleoside regulator 1663548..1664486 Clostridium botulinum A str. ATCC 19397 5395021 YP_001383906.1 CDS deoC NC_009697.1 1664778 1665416 D catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 1664778..1665416 Clostridium botulinum A str. ATCC 19397 5395000 YP_001383907.1 CDS rbsK NC_009697.1 1665760 1666671 D identified by match to protein family HMM PF00294; match to protein family HMM TIGR02152; ribokinase 1665760..1666671 Clostridium botulinum A str. ATCC 19397 5397950 YP_001383908.1 CDS hisZ NC_009697.1 1667119 1668354 D May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase 1667119..1668354 Clostridium botulinum A str. ATCC 19397 5394810 YP_001383909.1 CDS hisG NC_009697.1 1668379 1669017 D short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase 1668379..1669017 Clostridium botulinum A str. ATCC 19397 5396926 YP_001383910.1 CDS hisD NC_009697.1 1669095 1670399 D catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 1669095..1670399 Clostridium botulinum A str. ATCC 19397 5395297 YP_001383911.1 CDS hisB NC_009697.1 1670549 1671139 D catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 1670549..1671139 Clostridium botulinum A str. ATCC 19397 5395953 YP_001383912.1 CDS hisH NC_009697.1 1671267 1671872 D with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 1671267..1671872 Clostridium botulinum A str. ATCC 19397 5397236 YP_001383913.1 CDS hisA NC_009697.1 1671869 1672597 D catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1671869..1672597 Clostridium botulinum A str. ATCC 19397 5394758 YP_001383914.1 CDS hisC NC_009697.1 1672594 1673658 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 1672594..1673658 Clostridium botulinum A str. ATCC 19397 5395320 YP_001383915.1 CDS hisF NC_009697.1 1673855 1674616 D catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 1673855..1674616 Clostridium botulinum A str. ATCC 19397 5397917 YP_001383916.1 CDS hisI NC_009697.1 1674769 1675101 D PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 1674769..1675101 Clostridium botulinum A str. ATCC 19397 5395239 YP_001383917.1 CDS hisE NC_009697.1 1675226 1675558 D catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 1675226..1675558 Clostridium botulinum A str. ATCC 19397 5394642 YP_001383918.1 CDS CLB_1595 NC_009697.1 1675694 1676389 D identified by match to protein family HMM PF04143; hypothetical protein 1675694..1676389 Clostridium botulinum A str. ATCC 19397 5396680 YP_001383919.1 CDS CLB_1596 NC_009697.1 1676403 1676624 D identified by match to protein family HMM PF01206; hypothetical protein 1676403..1676624 Clostridium botulinum A str. ATCC 19397 5395810 YP_001383920.1 CDS CLB_1597 NC_009697.1 1676642 1677169 D identified by match to protein family HMM PF04143; hypothetical protein 1676642..1677169 Clostridium botulinum A str. ATCC 19397 5398019 YP_001383921.1 CDS CLB_1598 NC_009697.1 1677200 1678090 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator complement(1677200..1678090) Clostridium botulinum A str. ATCC 19397 5397161 YP_001383922.1 CDS CLB_1599 NC_009697.1 1678354 1679604 D identified by match to protein family HMM PF01235; sodium:alanine symporter family protein 1678354..1679604 Clostridium botulinum A str. ATCC 19397 5394987 YP_001383923.1 CDS CLB_1600 NC_009697.1 1679685 1681385 D identified by match to protein family HMM PF00070; match to protein family HMM PF00581; match to protein family HMM PF02852; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase family protein 1679685..1681385 Clostridium botulinum A str. ATCC 19397 5396772 YP_001383924.1 CDS CLB_1601 NC_009697.1 1681538 1682794 D identified by match to protein family HMM PF04143; hypothetical protein 1681538..1682794 Clostridium botulinum A str. ATCC 19397 5395228 YP_001383925.1 CDS CLB_1602 NC_009697.1 1683101 1683808 D identified by match to protein family HMM PF00005; antibiotic ABC transporter ATP-binding protein 1683101..1683808 Clostridium botulinum A str. ATCC 19397 5395957 YP_001383926.1 CDS CLB_1603 NC_009697.1 1683811 1684542 D antibiotic ABC transporter permease 1683811..1684542 Clostridium botulinum A str. ATCC 19397 5396962 YP_001383927.1 CDS CLB_1604 NC_009697.1 1684713 1685288 D antibiotic ABC transporter permease 1684713..1685288 Clostridium botulinum A str. ATCC 19397 5397644 YP_001383928.1 CDS CLB_1605 NC_009697.1 1685405 1686064 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; antibiotic transporter response regulator 1685405..1686064 Clostridium botulinum A str. ATCC 19397 5397190 YP_001383929.1 CDS CLB_1606 NC_009697.1 1686055 1687434 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; antibiotic transporter sensor protein 1686055..1687434 Clostridium botulinum A str. ATCC 19397 5397898 YP_001383930.1 CDS arcA-2 NC_009697.1 1687998 1689224 D identified by match to protein family HMM PF02274; match to protein family HMM TIGR01078; arginine deiminase 1687998..1689224 Clostridium botulinum A str. ATCC 19397 5396848 YP_001383931.1 CDS arcD NC_009697.1 1689349 1690767 D identified by match to protein family HMM PF00324; arginine/ornithine antiporter 1689349..1690767 Clostridium botulinum A str. ATCC 19397 5396944 YP_001383932.1 CDS CLB_1609 NC_009697.1 1690987 1691637 R identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065; hemolysin III complement(1690987..1691637) Clostridium botulinum A str. ATCC 19397 5398080 YP_001383933.1 CDS CLB_1610 NC_009697.1 1692008 1692604 D identified by match to protein family HMM PF08876; hypothetical protein 1692008..1692604 Clostridium botulinum A str. ATCC 19397 5397455 YP_001383934.1 CDS CLB_1612 NC_009697.1 1692975 1693535 D identified by match to protein family HMM PF01966; HD domain-containing protein 1692975..1693535 Clostridium botulinum A str. ATCC 19397 5397884 YP_001383935.1 CDS CLB_1613 NC_009697.1 1693575 1693724 D identified by Glimmer3; hypothetical protein 1693575..1693724 Clostridium botulinum A str. ATCC 19397 5396069 YP_001383936.1 CDS CLB_1614 NC_009697.1 1694051 1694389 R identified by Glimmer3; hypothetical protein complement(1694051..1694389) Clostridium botulinum A str. ATCC 19397 5396048 YP_001383937.1 CDS CLB_1615 NC_009697.1 1694656 1697949 D identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04434; match to protein family HMM PF04851; match to protein family HMM PF08455; SNF2 family helicase 1694656..1697949 Clostridium botulinum A str. ATCC 19397 5394660 YP_001383938.1 CDS CLB_1616 NC_009697.1 1698139 1698954 D identified by match to protein family HMM PF04607; RelA/SpoT domain-containing protein 1698139..1698954 Clostridium botulinum A str. ATCC 19397 5397614 YP_001383939.1 CDS CLB_1617 NC_009697.1 1699373 1699828 D hypothetical protein 1699373..1699828 Clostridium botulinum A str. ATCC 19397 5397298 YP_001383940.1 CDS CLB_1618 NC_009697.1 1700075 1701064 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 1700075..1701064 Clostridium botulinum A str. ATCC 19397 5397215 YP_001383941.1 CDS CLB_1619 NC_009697.1 1701213 1702967 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 1701213..1702967 Clostridium botulinum A str. ATCC 19397 5397553 YP_001383942.1 CDS CLB_1620 NC_009697.1 1702969 1704693 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 1702969..1704693 Clostridium botulinum A str. ATCC 19397 5396640 YP_001383943.1 CDS CLB_1621 NC_009697.1 1705085 1706086 D identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 1705085..1706086 Clostridium botulinum A str. ATCC 19397 5397426 YP_001383944.1 CDS CLB_1622 NC_009697.1 1706390 1707337 D identified by match to protein family HMM PF00480; glucokinase 1706390..1707337 Clostridium botulinum A str. ATCC 19397 5395694 YP_001383945.1 CDS CLB_1623 NC_009697.1 1707584 1709248 D identified by match to protein family HMM PF00128; glycosyl hydrolase family protein 1707584..1709248 Clostridium botulinum A str. ATCC 19397 5397366 YP_001383946.1 CDS CLB_1624 NC_009697.1 1709290 1710948 D identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR02003; PTS system glucose/glucoside family transporter subunit IIBC 1709290..1710948 Clostridium botulinum A str. ATCC 19397 5397331 YP_001383947.1 CDS CLB_1625 NC_009697.1 1710952 1711743 D identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein 1710952..1711743 Clostridium botulinum A str. ATCC 19397 5397294 YP_001383948.1 CDS CLB_1626 NC_009697.1 1711968 1712591 D identified by match to protein family HMM TIGR02840; hypothetical protein 1711968..1712591 Clostridium botulinum A str. ATCC 19397 5397090 YP_001383949.1 CDS CLB_1627 NC_009697.1 1712880 1713215 R hypothetical protein complement(1712880..1713215) Clostridium botulinum A str. ATCC 19397 5396730 YP_001383950.1 CDS CLB_1628 NC_009697.1 1713543 1715150 D hypothetical protein 1713543..1715150 Clostridium botulinum A str. ATCC 19397 5397403 YP_001383951.1 CDS CLB_1629 NC_009697.1 1715308 1715763 D hypothetical protein 1715308..1715763 Clostridium botulinum A str. ATCC 19397 5395184 YP_001383952.1 CDS CLB_1630 NC_009697.1 1716059 1718161 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase complement(1716059..1718161) Clostridium botulinum A str. ATCC 19397 5395857 YP_001383953.1 CDS CLB_1631 NC_009697.1 1718199 1718891 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(1718199..1718891) Clostridium botulinum A str. ATCC 19397 5397951 YP_001383954.1 CDS CLB_1632 NC_009697.1 1719318 1719434 D identified by Glimmer3; hypothetical protein 1719318..1719434 Clostridium botulinum A str. ATCC 19397 5395111 YP_001383955.1 CDS CLB_1633 NC_009697.1 1719486 1720712 D identified by match to protein family HMM PF07690; major facilitator family transporter 1719486..1720712 Clostridium botulinum A str. ATCC 19397 5395423 YP_001383956.1 CDS CLB_1634 NC_009697.1 1721267 1722127 R identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD family hydrolase complement(1721267..1722127) Clostridium botulinum A str. ATCC 19397 5396867 YP_001383957.1 CDS CLB_1635 NC_009697.1 1722136 1722903 R identified by match to protein family HMM PF00455; match to protein family HMM PF08220; match to protein family HMM PF08279; DeoR family transcriptional regulator complement(1722136..1722903) Clostridium botulinum A str. ATCC 19397 5397119 YP_001383958.1 CDS CLB_1636 NC_009697.1 1723426 1723956 D identified by match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; RNA polymerase sigma factor 1723426..1723956 Clostridium botulinum A str. ATCC 19397 5396857 YP_001383959.1 CDS CLB_1637 NC_009697.1 1724146 1724325 D hypothetical protein 1724146..1724325 Clostridium botulinum A str. ATCC 19397 5394755 YP_001383960.1 CDS CLB_1638 NC_009697.1 1724508 1728137 R identified by match to protein family HMM PF00801; match to protein family HMM PF01752; match to protein family HMM PF04151; match to protein family HMM PF08453; collagenase complement(1724508..1728137) Clostridium botulinum A str. ATCC 19397 5397231 YP_001383961.1 CDS metF NC_009697.1 1728611 1729498 D identified by match to protein family HMM PF02219; match to protein family HMM TIGR00676; 5,10-methylenetetrahydrofolate reductase 1728611..1729498 Clostridium botulinum A str. ATCC 19397 5394671 YP_001383962.1 CDS CLB_1640 NC_009697.1 1729671 1730351 D identified by match to protein family HMM PF02965; hypothetical protein 1729671..1730351 Clostridium botulinum A str. ATCC 19397 5396658 YP_001383963.1 CDS CLB_1641 NC_009697.1 1730341 1732719 D identified by match to protein family HMM PF00809; match to protein family HMM PF02310; match to protein family HMM PF02574; match to protein family HMM PF02607; 5-methyltetrahydrofolate--homocysteine methyltransferase 1730341..1732719 Clostridium botulinum A str. ATCC 19397 5395854 YP_001383964.1 CDS CLB_1642 NC_009697.1 1732966 1733385 R hypothetical protein complement(1732966..1733385) Clostridium botulinum A str. ATCC 19397 5396970 YP_001383965.1 CDS CLB_1643 NC_009697.1 1733864 1734436 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 1733864..1734436 Clostridium botulinum A str. ATCC 19397 5397384 YP_001383966.1 CDS CLB_1644 NC_009697.1 1734429 1735883 D hypothetical protein 1734429..1735883 Clostridium botulinum A str. ATCC 19397 5394871 YP_001383967.1 CDS acoR NC_009697.1 1736233 1738185 D identified by match to protein family HMM PF00158; match to protein family HMM PF01590; match to protein family HMM PF02954; aco operon transcriptional regulator 1736233..1738185 Clostridium botulinum A str. ATCC 19397 5395278 YP_001383968.1 CDS CLB_1646 NC_009697.1 1738354 1738725 D identified by match to protein family HMM TIGR02058; hypothetical protein 1738354..1738725 Clostridium botulinum A str. ATCC 19397 5397997 YP_001383969.1 CDS acoA NC_009697.1 1738746 1739729 D identified by match to protein family HMM PF00676; TPP-dependent acetoin dehydrogenase complex, E1 component subunit alpha 1738746..1739729 Clostridium botulinum A str. ATCC 19397 5395682 YP_001383970.1 CDS acoB NC_009697.1 1739732 1740703 D identified by match to protein family HMM PF02779; match to protein family HMM PF02780; TPP-dependent acetoin dehydrogenase complex, E1 component subunit beta 1739732..1740703 Clostridium botulinum A str. ATCC 19397 5397471 YP_001383971.1 CDS acoX NC_009697.1 1740756 1741751 D identified by match to protein family HMM PF01513; acetoin catabolism protein X 1740756..1741751 Clostridium botulinum A str. ATCC 19397 5397197 YP_001383972.1 CDS acoC NC_009697.1 1741787 1743097 D identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; TPP-dependent acetoin dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase 1741787..1743097 Clostridium botulinum A str. ATCC 19397 5395883 YP_001383973.1 CDS acoL NC_009697.1 1743110 1744501 D identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase 1743110..1744501 Clostridium botulinum A str. ATCC 19397 5397278 YP_001383974.1 CDS CLB_1652 NC_009697.1 1744526 1745521 D identified by match to protein family HMM PF03099; match to protein family HMM TIGR00545; lipoate-protein ligase A 1744526..1745521 Clostridium botulinum A str. ATCC 19397 5396486 YP_001383975.1 CDS CLB_1653 NC_009697.1 1745860 1747020 D identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186; glycine betaine/L-proline ABC transporter ATP-binding protein 1745860..1747020 Clostridium botulinum A str. ATCC 19397 5396306 YP_001383976.1 CDS CLB_1654 NC_009697.1 1747013 1748596 D identified by match to protein family HMM PF00528; match to protein family HMM PF04069; glycine betaine/proline ABC transporter permease/substrate-binding protein 1747013..1748596 Clostridium botulinum A str. ATCC 19397 5397662 YP_001383977.1 CDS thrC NC_009697.1 1749411 1750892 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1749411..1750892 Clostridium botulinum A str. ATCC 19397 5395743 YP_001383978.1 CDS thrB NC_009697.1 1750902 1751795 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 1750902..1751795 Clostridium botulinum A str. ATCC 19397 5395089 YP_001383979.1 CDS CLB_1657 NC_009697.1 1751922 1753241 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive; aspartate kinase 1751922..1753241 Clostridium botulinum A str. ATCC 19397 5396297 YP_001383980.1 CDS hom-1 NC_009697.1 1753464 1754741 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1753464..1754741 Clostridium botulinum A str. ATCC 19397 5398083 YP_001383981.1 CDS CLB_1659 NC_009697.1 1755328 1757238 D identified by match to protein family HMM PF00158; match to protein family HMM PF01590; match to protein family HMM PF02954; match to protein family HMM TIGR00229; sensory box sigma-54 dependent transcriptional regulator 1755328..1757238 Clostridium botulinum A str. ATCC 19397 5397451 YP_001383982.1 CDS CLB_1660 NC_009697.1 1757747 1758913 D identified by match to protein family HMM PF00465; NADH-dependent butanol dehydrogenase 1757747..1758913 Clostridium botulinum A str. ATCC 19397 5398203 YP_001383983.1 CDS CLB_1661 NC_009697.1 1759242 1760129 D identified by match to protein family HMM PF00175; match to protein family HMM PF00970; ferredoxin-NADP(+) reductase subunit alpha 1759242..1760129 Clostridium botulinum A str. ATCC 19397 5395155 YP_001383984.1 CDS gltA-1 NC_009697.1 1760129 1761511 D function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase 1760129..1761511 Clostridium botulinum A str. ATCC 19397 5397408 YP_001383985.1 CDS CLB_1663 NC_009697.1 1761740 1763704 D identified by match to protein family HMM PF00158; match to protein family HMM PF01590; match to protein family HMM PF02954; match to protein family HMM PF07728; sensory box sigma-54 dependent transcriptional regulator 1761740..1763704 Clostridium botulinum A str. ATCC 19397 5395469 YP_001383986.1 CDS CLB_1664 NC_009697.1 1763711 1764412 D identified by match to protein family HMM PF00805; pentapeptide repeat-containing protein 1763711..1764412 Clostridium botulinum A str. ATCC 19397 5397718 YP_001383987.1 CDS CLB_1665 NC_009697.1 1764835 1765914 D identified by match to protein family HMM PF02368; Ig-like domain-containing protein 1764835..1765914 Clostridium botulinum A str. ATCC 19397 5397268 YP_001383988.1 CDS CLB_1666 NC_009697.1 1766023 1766226 D identified by Glimmer3; hypothetical protein 1766023..1766226 Clostridium botulinum A str. ATCC 19397 5395411 YP_001383989.1 CDS CLB_1667 NC_009697.1 1766406 1766627 D lipoprotein 1766406..1766627 Clostridium botulinum A str. ATCC 19397 5397751 YP_001383990.1 CDS CLB_1668 NC_009697.1 1766986 1767147 D hypothetical protein 1766986..1767147 Clostridium botulinum A str. ATCC 19397 5397207 YP_001383991.1 CDS CLB_1669 NC_009697.1 1767435 1767809 D identified by match to protein family HMM PF08239; hypothetical protein 1767435..1767809 Clostridium botulinum A str. ATCC 19397 5396131 YP_001383992.1 CDS CLB_1670 NC_009697.1 1767995 1768219 D identified by Glimmer3; hypothetical protein 1767995..1768219 Clostridium botulinum A str. ATCC 19397 5397566 YP_001383993.1 CDS CLB_1671 NC_009697.1 1768687 1768923 D identified by Glimmer3; hypothetical protein 1768687..1768923 Clostridium botulinum A str. ATCC 19397 5395265 YP_001383994.1 CDS CLB_1672 NC_009697.1 1769079 1769630 D hypothetical protein 1769079..1769630 Clostridium botulinum A str. ATCC 19397 5395587 YP_001383995.1 CDS CLB_1673 NC_009697.1 1769668 1769955 D hypothetical protein 1769668..1769955 Clostridium botulinum A str. ATCC 19397 5395370 YP_001383996.1 CDS CLB_1674 NC_009697.1 1770456 1771088 D hypothetical protein 1770456..1771088 Clostridium botulinum A str. ATCC 19397 5395082 YP_001383997.1 CDS CLB_1675 NC_009697.1 1771121 1771675 D identified by match to protein family HMM PF01814; hypothetical protein 1771121..1771675 Clostridium botulinum A str. ATCC 19397 5395542 YP_001383998.1 CDS alr NC_009697.1 1772113 1773282 D converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 1772113..1773282 Clostridium botulinum A str. ATCC 19397 5397530 YP_001383999.1 CDS CLB_1677 NC_009697.1 1773703 1775175 D identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 1773703..1775175 Clostridium botulinum A str. ATCC 19397 5397456 YP_001384000.1 CDS CLB_1678 NC_009697.1 1775263 1776603 D identified by match to protein family HMM PF00860; match to protein family HMM PF00916; xanthine/uracil permease family protein 1775263..1776603 Clostridium botulinum A str. ATCC 19397 5397757 YP_001384001.1 CDS CLB_1679 NC_009697.1 1776843 1777676 D identified by match to protein family HMM PF06161; hypothetical protein 1776843..1777676 Clostridium botulinum A str. ATCC 19397 5398059 YP_001384002.1 CDS CLB_1680 NC_009697.1 1777893 1778777 R identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase family oxidoreductase complement(1777893..1778777) Clostridium botulinum A str. ATCC 19397 5397858 YP_001384003.1 CDS CLB_1681 NC_009697.1 1779253 1781259 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein 1779253..1781259 Clostridium botulinum A str. ATCC 19397 5396877 YP_001384004.1 CDS CLB_1682 NC_009697.1 1782172 1783185 D identified by match to protein family HMM PF07656; hypothetical protein 1782172..1783185 Clostridium botulinum A str. ATCC 19397 5395753 YP_001384005.1 CDS CLB_1683 NC_009697.1 1783338 1783889 R hypothetical protein complement(1783338..1783889) Clostridium botulinum A str. ATCC 19397 5398027 YP_001384006.1 CDS CLB_1684 NC_009697.1 1784249 1787482 D identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04434; match to protein family HMM PF08455; Snf2/Rad54 family helicase 1784249..1787482 Clostridium botulinum A str. ATCC 19397 5395961 YP_001384007.1 CDS CLB_1685 NC_009697.1 1787538 1787819 R identified by match to protein family HMM PF01980; hypothetical protein complement(1787538..1787819) Clostridium botulinum A str. ATCC 19397 5397529 YP_001384008.1 CDS CLB_1686 NC_009697.1 1788059 1788190 D identified by Glimmer3; hypothetical protein 1788059..1788190 Clostridium botulinum A str. ATCC 19397 5398013 YP_001384009.1 CDS CLB_1687 NC_009697.1 1788420 1788944 D identified by match to protein family HMM PF02663; formylmethanofuran dehydrogenase E subunit-like protein 1788420..1788944 Clostridium botulinum A str. ATCC 19397 5396984 YP_001384010.1 CDS CLB_1688 NC_009697.1 1789081 1790676 D identified by match to protein family HMM PF00496; peptide/opine/nickel uptake ABC transporter substrate-binding protein 1789081..1790676 Clostridium botulinum A str. ATCC 19397 5397247 YP_001384011.1 CDS CLB_1689 NC_009697.1 1790690 1791664 D identified by match to protein family HMM PF00528; peptide/opine/nickel uptake ABC transporter permease 1790690..1791664 Clostridium botulinum A str. ATCC 19397 5396653 YP_001384012.1 CDS CLB_1690 NC_009697.1 1791668 1792489 D identified by match to protein family HMM PF00528; peptide/opine/nickel uptake ABC transporter permease 1791668..1792489 Clostridium botulinum A str. ATCC 19397 5396060 YP_001384013.1 CDS CLB_1691 NC_009697.1 1792520 1794202 D identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; ABC transporter ATP-binding protein 1792520..1794202 Clostridium botulinum A str. ATCC 19397 5395799 YP_001384014.1 CDS CLB_1692 NC_009697.1 1794443 1795030 R identified by match to protein family HMM PF00929; DNA polymerase III subunit epsilon complement(1794443..1795030) Clostridium botulinum A str. ATCC 19397 5397473 YP_001384015.1 CDS CLB_1693 NC_009697.1 1795325 1796275 D identified by match to protein family HMM PF06207; hypothetical protein 1795325..1796275 Clostridium botulinum A str. ATCC 19397 5395277 YP_001384016.1 CDS CLB_1694 NC_009697.1 1796547 1797182 D identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242; UbiE/COQ5 family methlytransferase 1796547..1797182 Clostridium botulinum A str. ATCC 19397 5396494 YP_001384017.1 CDS CLB_1695 NC_009697.1 1797330 1797770 R identified by match to protein family HMM PF00011; heat shock protein complement(1797330..1797770) Clostridium botulinum A str. ATCC 19397 5396332 YP_001384018.1 CDS CLB_1696 NC_009697.1 1798121 1799305 D identified by match to protein family HMM PF07690; major facilitator family protein 1798121..1799305 Clostridium botulinum A str. ATCC 19397 5395824 YP_001384019.1 CDS CLB_1697 NC_009697.1 1799456 1800019 D identified by match to protein family HMM PF00440; hypothetical protein 1799456..1800019 Clostridium botulinum A str. ATCC 19397 5395802 YP_001384020.1 CDS fruK NC_009697.1 1800219 1801124 D identified by match to protein family HMM PF00294; match to protein family HMM TIGR03168; fructose-1-phosphate kinase 1800219..1801124 Clostridium botulinum A str. ATCC 19397 5396507 YP_001384021.1 CDS CLB_1699 NC_009697.1 1801241 1802620 R identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924; amino acid/peptide transporter complement(1801241..1802620) Clostridium botulinum A str. ATCC 19397 5395459 YP_001384022.1 CDS CLB_1700 NC_009697.1 1803215 1803370 D identified by Glimmer3; hypothetical protein 1803215..1803370 Clostridium botulinum A str. ATCC 19397 5397747 YP_001384023.1 CDS CLB_1701 NC_009697.1 1803522 1804496 D hypothetical protein 1803522..1804496 Clostridium botulinum A str. ATCC 19397 5395829 YP_001384024.1 CDS CLB_1702 NC_009697.1 1804607 1805140 R hypothetical protein complement(1804607..1805140) Clostridium botulinum A str. ATCC 19397 5396713 YP_001384025.1 CDS CLB_1703 NC_009697.1 1805403 1805558 D identified by Glimmer3; hypothetical protein 1805403..1805558 Clostridium botulinum A str. ATCC 19397 5396686 YP_001384026.1 CDS CLB_1704 NC_009697.1 1805595 1806554 D identified by match to protein family HMM PF00294; match to protein family HMM PF08543; PfkB family kinase 1805595..1806554 Clostridium botulinum A str. ATCC 19397 5397342 YP_001384027.1 CDS safA NC_009697.1 1806699 1807334 R identified by match to protein family HMM PF00188; match to protein family HMM PF01476; spore coat assembly protein SafA complement(1806699..1807334) Clostridium botulinum A str. ATCC 19397 5395415 YP_001384028.1 CDS CLB_1706 NC_009697.1 1807736 1808155 R identified by Glimmer3; hypothetical protein complement(1807736..1808155) Clostridium botulinum A str. ATCC 19397 5397707 YP_001384029.1 CDS CLB_1707 NC_009697.1 1808502 1808711 D identified by match to protein family HMM PF00313; cold shock protein 1808502..1808711 Clostridium botulinum A str. ATCC 19397 5395491 YP_001384030.1 CDS CLB_1708 NC_009697.1 1809087 1811090 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein 1809087..1811090 Clostridium botulinum A str. ATCC 19397 5397885 YP_001384031.1 CDS CLB_1709 NC_009697.1 1811371 1812951 R identified by match to protein family HMM PF00005; drug resistance ABC transporter ATP-binding protein complement(1811371..1812951) Clostridium botulinum A str. ATCC 19397 5395485 YP_001384032.1 CDS CLB_1710 NC_009697.1 1813257 1813748 D identified by match to protein family HMM PF04073; YbaK/prolyl-tRNA synthetase domain-containing protein 1813257..1813748 Clostridium botulinum A str. ATCC 19397 5396424 YP_001384033.1 CDS CLB_1711 NC_009697.1 1814319 1815173 D identified by match to protein family HMM PF00037; match to protein family HMM PF01077; match to protein family HMM PF03460; sulfite/nitrite reductase family protein 1814319..1815173 Clostridium botulinum A str. ATCC 19397 5395561 YP_001384034.1 CDS cheV NC_009697.1 1815313 1816206 R identified by match to protein family HMM PF00072; match to protein family HMM PF01584; chemotaxis protein CheV complement(1815313..1816206) Clostridium botulinum A str. ATCC 19397 5395128 YP_001384035.1 CDS CLB_1713 NC_009697.1 1816575 1817840 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; DEAD/DEAH box helicase 1816575..1817840 Clostridium botulinum A str. ATCC 19397 5395187 YP_001384036.1 CDS CLB_1714 NC_009697.1 1818163 1818999 D identified by match to protein family HMM PF00575; RNA-binding protein 1818163..1818999 Clostridium botulinum A str. ATCC 19397 5396407 YP_001384037.1 CDS deaD NC_009697.1 1819178 1820623 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; ATP-dependent RNA helicase DeaD 1819178..1820623 Clostridium botulinum A str. ATCC 19397 5397640 YP_001384038.1 CDS CLB_1716 NC_009697.1 1820777 1825234 D identified by Glimmer3; hypothetical protein 1820777..1825234 Clostridium botulinum A str. ATCC 19397 5396469 YP_001384039.1 CDS CLB_1717 NC_009697.1 1825633 1829712 D identified by match to protein family HMM PF00560; match to protein family HMM PF07532; hypothetical protein 1825633..1829712 Clostridium botulinum A str. ATCC 19397 5396747 YP_001384040.1 CDS CLB_1718 NC_009697.1 1830118 1831047 D identified by match to protein family HMM PF01832; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase domain-containing protein 1830118..1831047 Clostridium botulinum A str. ATCC 19397 5396226 YP_001384041.1 CDS CLB_1719 NC_009697.1 1831173 1831688 R identified by match to protein family HMM PF00210; ferritin family protein complement(1831173..1831688) Clostridium botulinum A str. ATCC 19397 5396452 YP_001384042.1 CDS CLB_1720 NC_009697.1 1831850 1832032 D identified by Glimmer3; hypothetical protein 1831850..1832032 Clostridium botulinum A str. ATCC 19397 5398218 YP_001384043.1 CDS CLB_1721 NC_009697.1 1832093 1832947 D identified by match to protein family HMM PF00072; match to protein family HMM PF04509; chemotaxis response regulator/CheC-like domain-containing protein 1832093..1832947 Clostridium botulinum A str. ATCC 19397 5397241 YP_001384044.1 CDS cheX NC_009697.1 1832947 1833408 D identified by match to protein family HMM PF04509; chemotaxis protein CheX 1832947..1833408 Clostridium botulinum A str. ATCC 19397 5396695 YP_001384045.1 CDS CLB_1723 NC_009697.1 1833591 1834949 R identified by match to protein family HMM PF07670; hypothetical protein complement(1833591..1834949) Clostridium botulinum A str. ATCC 19397 5394814 YP_001384046.1 CDS CLB_1724 NC_009697.1 1835687 1835890 D identified by match to protein family HMM PF00269; small, acid-soluble spore protein alpha 1835687..1835890 Clostridium botulinum A str. ATCC 19397 5396898 YP_001384047.1 CDS CLB_1725 NC_009697.1 1835951 1836151 D identified by match to protein family HMM PF00269; small, acid-soluble spore protein beta 1835951..1836151 Clostridium botulinum A str. ATCC 19397 5397581 YP_001384048.1 CDS CLB_1726 NC_009697.1 1836355 1836684 R Selenoprotein. identified by similarity to GB:ABG87712.1; hypothetical protein complement(1836355..1836684) Clostridium botulinum A str. ATCC 19397 5396435 YP_001384049.1 CDS xerC NC_009697.1 1837602 1838582 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 1837602..1838582 Clostridium botulinum A str. ATCC 19397 5394769 YP_001384050.1 CDS CLB_1728 NC_009697.1 1838905 1839378 R hypothetical protein complement(1838905..1839378) Clostridium botulinum A str. ATCC 19397 5396914 YP_001384051.1 CDS lexA NC_009697.1 1839676 1840281 D Represses a number of genes involved in the response to DNA damage; LexA repressor 1839676..1840281 Clostridium botulinum A str. ATCC 19397 5395451 YP_001384052.1 CDS CLB_1730 NC_009697.1 1840478 1841761 R identified by match to protein family HMM PF01053; match to protein family HMM PF06838; aluminum resistance protein complement(1840478..1841761) Clostridium botulinum A str. ATCC 19397 5397746 YP_001384053.1 CDS CLB_1731 NC_009697.1 1841721 1841837 R identified by Glimmer3; hypothetical protein complement(1841721..1841837) Clostridium botulinum A str. ATCC 19397 5397969 YP_001384054.1 CDS hfq NC_009697.1 1841862 1842119 R identified by match to protein family HMM PF01423; match to protein family HMM TIGR02383; RNA chaperone Hfq complement(1841862..1842119) Clostridium botulinum A str. ATCC 19397 5394931 YP_001384055.1 CDS miaA NC_009697.1 1842205 1843140 R IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase complement(1842205..1843140) Clostridium botulinum A str. ATCC 19397 5394864 YP_001384056.1 CDS mutL NC_009697.1 1843156 1845156 R This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein complement(1843156..1845156) Clostridium botulinum A str. ATCC 19397 5397570 YP_001384057.1 CDS mutS NC_009697.1 1845302 1848100 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(1845302..1848100) Clostridium botulinum A str. ATCC 19397 5394633 YP_001384058.1 CDS miaB NC_009697.1 1848180 1849532 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(1848180..1849532) Clostridium botulinum A str. ATCC 19397 5395074 YP_001384059.1 CDS CLB_1737 NC_009697.1 1850004 1851194 D identified by match to protein family HMM PF00155; aminotransferase, classes I and II 1850004..1851194 Clostridium botulinum A str. ATCC 19397 5395216 YP_001384060.1 CDS CLB_1738 NC_009697.1 1851279 1851440 D identified by similarity to GB:ABK61786.1; hypothetical protein 1851279..1851440 Clostridium botulinum A str. ATCC 19397 5396378 YP_001384061.1 CDS aspB-1 NC_009697.1 1851495 1852685 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1851495..1852685 Clostridium botulinum A str. ATCC 19397 5397114 YP_001384062.1 CDS CLB_1740 NC_009697.1 1852716 1853582 R identified by match to protein family HMM PF00583; acetyltransferase complement(1852716..1853582) Clostridium botulinum A str. ATCC 19397 5396725 YP_001384063.1 CDS CLB_1741 NC_009697.1 1853664 1854722 R identified by match to protein family HMM TIGR02906; spore coat protein complement(1853664..1854722) Clostridium botulinum A str. ATCC 19397 5397796 YP_001384064.1 CDS CLB_1742 NC_009697.1 1854970 1856886 R these proteins appear to have resulted from a fusion of lytB and rpsA; catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(1854970..1856886) Clostridium botulinum A str. ATCC 19397 5398148 YP_001384065.1 CDS cmk NC_009697.1 1856950 1857603 R Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase complement(1856950..1857603) Clostridium botulinum A str. ATCC 19397 5396113 YP_001384066.1 CDS aroH NC_009697.1 1857679 1858050 R identified by match to protein family HMM PF07736; match to protein family HMM TIGR01796; chorismate mutase complement(1857679..1858050) Clostridium botulinum A str. ATCC 19397 5395172 YP_001384067.1 CDS CLB_1745 NC_009697.1 1858050 1859273 R identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR00275; pyridine nucleotide-disulfide oxidoreductase family protein complement(1858050..1859273) Clostridium botulinum A str. ATCC 19397 5397602 YP_001384068.1 CDS gluD NC_009697.1 1859568 1860833 R identified by match to protein family HMM PF00208; match to protein family HMM PF02812; glutamate dehydrogenase complement(1859568..1860833) Clostridium botulinum A str. ATCC 19397 5395388 YP_001384069.1 CDS CLB_1747 NC_009697.1 1861068 1861952 R identified by match to protein family HMM PF01380; match to protein family HMM PF01418; RpiR family transcriptional regulator complement(1861068..1861952) Clostridium botulinum A str. ATCC 19397 5396499 YP_001384070.1 CDS rluB NC_009697.1 1862320 1863030 R identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; ribosomal large subunit pseudouridine synthase B complement(1862320..1863030) Clostridium botulinum A str. ATCC 19397 5396515 YP_001384071.1 CDS CLB_1749 NC_009697.1 1863493 1864782 R hypothetical protein complement(1863493..1864782) Clostridium botulinum A str. ATCC 19397 5397048 YP_001384072.1 CDS CLB_1750 NC_009697.1 1864880 1866160 R identified by match to protein family HMM PF06354; hypothetical protein complement(1864880..1866160) Clostridium botulinum A str. ATCC 19397 5398163 YP_001384073.1 CDS CLB_1751 NC_009697.1 1866455 1867858 R identified by match to protein family HMM PF00535; glycosyl transferase family protein complement(1866455..1867858) Clostridium botulinum A str. ATCC 19397 5395669 YP_001384074.1 CDS CLB_1752 NC_009697.1 1868228 1868419 D identified by Glimmer3; hypothetical protein 1868228..1868419 Clostridium botulinum A str. ATCC 19397 5395691 YP_001384075.1 CDS CLB_1753 NC_009697.1 1868792 1870813 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein 1868792..1870813 Clostridium botulinum A str. ATCC 19397 5396094 YP_001384076.1 CDS CLB_1754 NC_009697.1 1870857 1871543 R identified by match to protein family HMM PF02683; cytochrome c-type biogenesis protein complement(1870857..1871543) Clostridium botulinum A str. ATCC 19397 5395713 YP_001384077.1 CDS CLB_1755 NC_009697.1 1871545 1871976 R identified by match to protein family HMM PF00085; thioredoxin family protein complement(1871545..1871976) Clostridium botulinum A str. ATCC 19397 5395145 YP_001384078.1 CDS CLB_1756 NC_009697.1 1872091 1872927 R identified by match to protein family HMM PF00795; carbon-nitrogen family hydrolase complement(1872091..1872927) Clostridium botulinum A str. ATCC 19397 5397460 YP_001384079.1 CDS CLB_1757 NC_009697.1 1873058 1873612 R identified by Glimmer3; hypothetical protein complement(1873058..1873612) Clostridium botulinum A str. ATCC 19397 5395046 YP_001384080.1 CDS CLB_1758 NC_009697.1 1874024 1875457 D identified by match to protein family HMM PF00999; match to protein family HMM PF02080; monovalent cation:proton antiporter-2 (CPA2) family protein 1874024..1875457 Clostridium botulinum A str. ATCC 19397 5397703 YP_001384081.1 CDS pcaC-1 NC_009697.1 1875582 1875926 R identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778; 4-carboxymuconolactone decarboxylase complement(1875582..1875926) Clostridium botulinum A str. ATCC 19397 5397924 YP_001384082.1 CDS CLB_1760 NC_009697.1 1876064 1876579 R identified by match to protein family HMM PF00583; acetyltransferase complement(1876064..1876579) Clostridium botulinum A str. ATCC 19397 5394629 YP_001384083.1 CDS CLB_1761 NC_009697.1 1876764 1877258 R lipoprotein complement(1876764..1877258) Clostridium botulinum A str. ATCC 19397 5394992 YP_001384084.1 CDS CLB_1762 NC_009697.1 1877490 1877801 R identified by match to protein family HMM PF01906; hypothetical protein complement(1877490..1877801) Clostridium botulinum A str. ATCC 19397 5397406 YP_001384085.1 CDS CLB_1763 NC_009697.1 1877782 1878015 R identified by Glimmer3; hypothetical protein complement(1877782..1878015) Clostridium botulinum A str. ATCC 19397 5394643 YP_001384086.1 CDS CLB_1764 NC_009697.1 1878149 1878391 D hypothetical protein 1878149..1878391 Clostridium botulinum A str. ATCC 19397 5396002 YP_001384087.1 CDS CLB_1765 NC_009697.1 1878394 1880118 D identified by match to protein family HMM PF00037; match to protein family HMM PF02906; match to protein family HMM PF04060; match to protein family HMM TIGR00229; sensory box-containing [Fe] hydrogenase 1878394..1880118 Clostridium botulinum A str. ATCC 19397 5397772 YP_001384088.1 CDS CLB_1766 NC_009697.1 1880115 1881284 D identified by match to protein family HMM PF07228; sporulation domain-containing protein 1880115..1881284 Clostridium botulinum A str. ATCC 19397 5397632 YP_001384089.1 CDS CLB_1767 NC_009697.1 1881419 1883158 D identified by match to protein family HMM PF00037; match to protein family HMM PF02906; match to protein family HMM PF04060; match to protein family HMM TIGR00229; sensory box-containing [Fe] hydrogenase 1881419..1883158 Clostridium botulinum A str. ATCC 19397 5395347 YP_001384090.1 CDS hypE NC_009697.1 1883511 1884515 R identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR02124; hydrogenase expression/formation protein HypE complement(1883511..1884515) Clostridium botulinum A str. ATCC 19397 5396493 YP_001384091.1 CDS hypD NC_009697.1 1884683 1885756 R identified by match to protein family HMM PF01924; hydrogenase expression/formation protein HypD complement(1884683..1885756) Clostridium botulinum A str. ATCC 19397 5397502 YP_001384092.1 CDS CLB_1770 NC_009697.1 1885749 1885976 R identified by Glimmer3; hypothetical protein complement(1885749..1885976) Clostridium botulinum A str. ATCC 19397 5397786 YP_001384093.1 CDS hypF NC_009697.1 1885939 1888377 R identified by match to protein family HMM PF00708; match to protein family HMM PF01300; match to protein family HMM PF07503; match to protein family HMM TIGR00143; [NiFe] hydrogenase maturation protein HypF complement(1885939..1888377) Clostridium botulinum A str. ATCC 19397 5397547 YP_001384094.1 CDS CLB_1772 NC_009697.1 1888361 1888621 R identified by Glimmer3; hypothetical protein complement(1888361..1888621) Clostridium botulinum A str. ATCC 19397 5398124 YP_001384095.1 CDS CLB_1773 NC_009697.1 1888876 1889391 R identified by match to protein family HMM PF00173; heme/steroid binding domain-containing protein complement(1888876..1889391) Clostridium botulinum A str. ATCC 19397 5397357 YP_001384096.1 CDS CLB_1774 NC_009697.1 1889551 1889967 R identified by match to protein family HMM PF01750; hydrogenase maturation protease complement(1889551..1889967) Clostridium botulinum A str. ATCC 19397 5398120 YP_001384097.1 CDS hupL NC_009697.1 1890000 1891415 R identified by match to protein family HMM PF00374; [Ni/Fe] hydrogenase, large subunit complement(1890000..1891415) Clostridium botulinum A str. ATCC 19397 5397479 YP_001384098.1 CDS hupS NC_009697.1 1891517 1892389 R identified by match to protein family HMM PF01058; match to protein family HMM TIGR00391; [Ni/Fe] hydrogenase, small subunit complement(1891517..1892389) Clostridium botulinum A str. ATCC 19397 5397271 YP_001384099.1 CDS CLB_1777 NC_009697.1 1892657 1893358 D identified by match to protein family HMM PF05857; TraX family protein 1892657..1893358 Clostridium botulinum A str. ATCC 19397 5395344 YP_001384100.1 CDS CLB_1778 NC_009697.1 1893520 1893807 R identified by Glimmer3; hypothetical protein complement(1893520..1893807) Clostridium botulinum A str. ATCC 19397 5396709 YP_001384101.1 CDS CLB_1779 NC_009697.1 1894023 1894136 D identified by Glimmer3; hypothetical protein 1894023..1894136 Clostridium botulinum A str. ATCC 19397 5395130 YP_001384102.1 CDS CLB_1780 NC_009697.1 1894342 1894509 D identified by Glimmer3; hypothetical protein 1894342..1894509 Clostridium botulinum A str. ATCC 19397 5396282 YP_001384103.1 CDS CLB_1781 NC_009697.1 1895400 1895567 D identified by Glimmer3; hypothetical protein 1895400..1895567 Clostridium botulinum A str. ATCC 19397 5396842 YP_001384104.1 CDS CLB_1782 NC_009697.1 1896176 1897732 R identified by match to protein family HMM PF00005; drug resistance ABC transporter ATP-binding protein complement(1896176..1897732) Clostridium botulinum A str. ATCC 19397 5395016 YP_001384105.1 CDS CLB_1783 NC_009697.1 1898094 1899827 R identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF02256; match to protein family HMM PF02906; match to protein family HMM TIGR02512; [Fe] hydrogenase complement(1898094..1899827) Clostridium botulinum A str. ATCC 19397 5394852 YP_001384106.1 CDS CLB_1784 NC_009697.1 1899847 1901742 R identified by match to protein family HMM PF00037; match to protein family HMM PF01512; [Fe] hydrogenase, electron-transfer subunit complement(1899847..1901742) Clostridium botulinum A str. ATCC 19397 5397251 YP_001384107.1 CDS CLB_1785 NC_009697.1 1901754 1902233 R identified by match to protein family HMM PF01257; Fe] hydrogenase, electron-transfer subunit complement(1901754..1902233) Clostridium botulinum A str. ATCC 19397 5398093 YP_001384108.1 CDS CLB_1786 NC_009697.1 1902709 1903896 R identified by match to protein family HMM PF00999; monovalent cation:proton antiporter-2 (CPA2) family protein complement(1902709..1903896) Clostridium botulinum A str. ATCC 19397 5397829 YP_001384109.1 CDS CLB_1787 NC_009697.1 1904155 1905033 R identified by match to protein family HMM PF03747; ADP-ribosylglycohydrolase family protein complement(1904155..1905033) Clostridium botulinum A str. ATCC 19397 5396189 YP_001384110.1 CDS CLB_1788 NC_009697.1 1905274 1906368 D identified by match to protein family HMM PF01594; hypothetical protein 1905274..1906368 Clostridium botulinum A str. ATCC 19397 5396811 YP_001384111.1 CDS dacB NC_009697.1 1906478 1907614 R identified by match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase complement(1906478..1907614) Clostridium botulinum A str. ATCC 19397 5395340 YP_001384112.1 CDS CLB_1790 NC_009697.1 1907798 1908310 D hypothetical protein 1907798..1908310 Clostridium botulinum A str. ATCC 19397 5394634 YP_001384113.1 CDS ytfJ NC_009697.1 1908378 1908818 D identified by match to protein family HMM TIGR02874; sporulation protein YtfJ 1908378..1908818 Clostridium botulinum A str. ATCC 19397 5397146 YP_001384114.1 CDS scpB NC_009697.1 1908879 1909460 R functions during chromosome segregation; may form a condensin-like structure with SMC and ScpA; forms a homodimer; segregation and condensation protein B complement(1908879..1909460) Clostridium botulinum A str. ATCC 19397 5395383 YP_001384115.1 CDS scpA NC_009697.1 1909453 1910199 R functions during chromosome segregation; may form a condensin-like structure with SMC and ScpB; segregation and condensation protein A complement(1909453..1910199) Clostridium botulinum A str. ATCC 19397 5398072 YP_001384116.1 CDS CLB_1794 NC_009697.1 1910174 1910764 R hypothetical protein complement(1910174..1910764) Clostridium botulinum A str. ATCC 19397 5397467 YP_001384117.1 CDS dacF NC_009697.1 1910977 1912200 R identified by match to protein family HMM PF00768; match to protein family HMM PF07943; D-alanyl-D-alanine carboxypeptidase complement(1910977..1912200) Clostridium botulinum A str. ATCC 19397 5395798 YP_001384118.1 CDS CLB_1796 NC_009697.1 1912323 1913045 R hypothetical protein complement(1912323..1913045) Clostridium botulinum A str. ATCC 19397 5396373 YP_001384119.1 CDS CLB_1797 NC_009697.1 1913204 1914262 R identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein complement(1913204..1914262) Clostridium botulinum A str. ATCC 19397 5397575 YP_001384120.1 CDS CLB_1798 NC_009697.1 1914404 1914652 R hypothetical protein complement(1914404..1914652) Clostridium botulinum A str. ATCC 19397 5398185 YP_001384121.1 CDS pdp NC_009697.1 1914759 1916063 R identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644; pyrimidine-nucleoside phosphorylase complement(1914759..1916063) Clostridium botulinum A str. ATCC 19397 5397040 YP_001384122.1 CDS punA NC_009697.1 1916349 1917164 R catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase complement(1916349..1917164) Clostridium botulinum A str. ATCC 19397 5394726 YP_001384123.1 CDS xerD NC_009697.1 1917202 1918077 R identified by match to protein family HMM PF00589; match to protein family HMM PF02899; match to protein family HMM TIGR02225; tyrosine recombinase XerD complement(1917202..1918077) Clostridium botulinum A str. ATCC 19397 5395386 YP_001384124.1 CDS CLB_1802 NC_009697.1 1918129 1918356 R identified by similarity to GB:AAK80026.1; hypothetical protein complement(1918129..1918356) Clostridium botulinum A str. ATCC 19397 5396068 YP_001384125.1 CDS CLB_1803 NC_009697.1 1918347 1919000 R identified by match to protein family HMM PF01944; match to protein family HMM TIGR02831; sporulation protein complement(1918347..1919000) Clostridium botulinum A str. ATCC 19397 5396441 YP_001384126.1 CDS CLB_1804 NC_009697.1 1919205 1919741 R identified by match to protein family HMM PF00293; match to protein family HMM TIGR00052; NUDIX family hydrolase complement(1919205..1919741) Clostridium botulinum A str. ATCC 19397 5395673 YP_001384127.1 CDS CLB_1805 NC_009697.1 1920225 1921751 R identified by match to protein family HMM PF00324; amino acid permease complement(1920225..1921751) Clostridium botulinum A str. ATCC 19397 5394886 YP_001384128.1 CDS CLB_1806 NC_009697.1 1922568 1923326 R identified by match to protein family HMM PF00877; nlpC/P60 family protein complement(1922568..1923326) Clostridium botulinum A str. ATCC 19397 5396326 YP_001384129.1 CDS CLB_1807 NC_009697.1 1924811 1925425 R identified by Glimmer3; hypothetical protein complement(1924811..1925425) Clostridium botulinum A str. ATCC 19397 5396192 YP_001384130.1 CDS CLB_1808 NC_009697.1 1925561 1926355 R identified by match to protein family HMM PF00589; phage integrase family site specific recombinase complement(1925561..1926355) Clostridium botulinum A str. ATCC 19397 5397674 YP_001384131.1 CDS spo0A NC_009697.1 1926642 1927463 R identified by match to protein family HMM PF00072; match to protein family HMM PF08769; match to protein family HMM TIGR02875; sporulation transcription factor Spo0A complement(1926642..1927463) Clostridium botulinum A str. ATCC 19397 5397216 YP_001384132.1 CDS spoIVB NC_009697.1 1927893 1929119 R identified by match to protein family HMM PF05580; match to protein family HMM TIGR02860; stage IV sporulation protein B complement(1927893..1929119) Clostridium botulinum A str. ATCC 19397 5397695 YP_001384133.1 CDS metA NC_009697.1 1929541 1930437 R identified by match to protein family HMM PF04204; match to protein family HMM TIGR01001; homoserine O-succinyltransferase complement(1929541..1930437) Clostridium botulinum A str. ATCC 19397 5394610 YP_001384134.1 CDS hom-2 NC_009697.1 1930464 1931690 R identified by match to protein family HMM PF00742; match to protein family HMM PF03447; homoserine dehydrogenase complement(1930464..1931690) Clostridium botulinum A str. ATCC 19397 5396412 YP_001384135.1 CDS CLB_1813 NC_009697.1 1931730 1933010 R identified by match to protein family HMM PF01053; match to protein family HMM TIGR01326; O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein complement(1931730..1933010) Clostridium botulinum A str. ATCC 19397 5398152 YP_001384136.1 CDS recN NC_009697.1 1933309 1935012 R identified by match to protein family HMM PF02463; match to protein family HMM TIGR00634; DNA repair protein recN complement(1933309..1935012) Clostridium botulinum A str. ATCC 19397 5396019 YP_001384137.1 CDS argR NC_009697.1 1935025 1935477 R regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor complement(1935025..1935477) Clostridium botulinum A str. ATCC 19397 5394941 YP_001384138.1 CDS ppnK NC_009697.1 1935479 1936324 R identified by match to protein family HMM PF01513; ATP-NAD kinase complement(1935479..1936324) Clostridium botulinum A str. ATCC 19397 5396379 YP_001384139.1 CDS CLB_1817 NC_009697.1 1936324 1937145 R identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478; hemolysin A complement(1936324..1937145) Clostridium botulinum A str. ATCC 19397 5395681 YP_001384140.1 CDS dxs NC_009697.1 1937167 1939035 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(1937167..1939035) Clostridium botulinum A str. ATCC 19397 5396153 YP_001384141.1 CDS CLB_1819 NC_009697.1 1939036 1939605 R hypothetical protein complement(1939036..1939605) Clostridium botulinum A str. ATCC 19397 5397820 YP_001384142.1 CDS xseB NC_009697.1 1941404 1941619 R catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit complement(1941404..1941619) Clostridium botulinum A str. ATCC 19397 5394606 YP_001384143.1 CDS xseA NC_009697.1 1941742 1942947 R bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit complement(1941742..1942947) Clostridium botulinum A str. ATCC 19397 5396550 YP_001384144.1 CDS nusB NC_009697.1 1943018 1943449 R Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB complement(1943018..1943449) Clostridium botulinum A str. ATCC 19397 5395333 YP_001384145.1 CDS asp NC_009697.1 1943588 1943983 R identified by match to protein family HMM PF03780; alkaline shock protein complement(1943588..1943983) Clostridium botulinum A str. ATCC 19397 5396254 YP_001384146.1 CDS CLB_1825 NC_009697.1 1944065 1944589 R stage III sporulation protein AH complement(1944065..1944589) Clostridium botulinum A str. ATCC 19397 5395425 YP_001384147.1 CDS CLB_1826 NC_009697.1 1944651 1945247 R identified by match to protein family HMM TIGR02830; stage III sporulation protein AG complement(1944651..1945247) Clostridium botulinum A str. ATCC 19397 5395244 YP_001384148.1 CDS spoIIIAF NC_009697.1 1945385 1945975 R identified by match to protein family HMM TIGR02896; stage III sporulation protein AF complement(1945385..1945975) Clostridium botulinum A str. ATCC 19397 5395996 YP_001384149.1 CDS CLB_1828 NC_009697.1 1946011 1947174 R identified by match to protein family HMM TIGR02829; stage III sporulation protein AE complement(1946011..1947174) Clostridium botulinum A str. ATCC 19397 5397162 YP_001384150.1 CDS CLB_1829 NC_009697.1 1947183 1947566 R identified by match to protein family HMM TIGR02849; stage III sporulation protein AD complement(1947183..1947566) Clostridium botulinum A str. ATCC 19397 5397076 YP_001384151.1 CDS CLB_1830 NC_009697.1 1947593 1947790 R identified by match to protein family HMM PF06686; match to protein family HMM TIGR02848; stage III sporulation protein AC complement(1947593..1947790) Clostridium botulinum A str. ATCC 19397 5396321 YP_001384152.1 CDS CLB_1831 NC_009697.1 1947833 1948351 R necessary for complete engulfment of forespore; stage III sporulation protein SpoAB complement(1947833..1948351) Clostridium botulinum A str. ATCC 19397 5394848 YP_001384153.1 CDS CLB_1832 NC_009697.1 1948388 1949311 R identified by match to protein family HMM TIGR02858; stage III sporulation protein AA complement(1948388..1949311) Clostridium botulinum A str. ATCC 19397 5394686 YP_001384154.1 CDS CLB_1833 NC_009697.1 1949506 1949925 R hypothetical protein complement(1949506..1949925) Clostridium botulinum A str. ATCC 19397 5394774 YP_001384155.1 CDS efp NC_009697.1 1949966 1950523 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(1949966..1950523) Clostridium botulinum A str. ATCC 19397 5394638 YP_001384156.1 CDS aroQ NC_009697.1 1950612 1951055 R catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase complement(1950612..1951055) Clostridium botulinum A str. ATCC 19397 5397107 YP_001384157.1 CDS aroK NC_009697.1 1951210 1951722 R identified by match to protein family HMM PF01202; shikimate kinase complement(1951210..1951722) Clostridium botulinum A str. ATCC 19397 5394770 YP_001384158.1 CDS CLB_1837 NC_009697.1 1951856 1952350 R hypothetical protein complement(1951856..1952350) Clostridium botulinum A str. ATCC 19397 5394842 YP_001384159.1 CDS CLB_1838 NC_009697.1 1952356 1952802 R identified by Glimmer3; hypothetical protein complement(1952356..1952802) Clostridium botulinum A str. ATCC 19397 5397131 YP_001384160.1 CDS CLB_1839 NC_009697.1 1952818 1953507 R hypothetical protein complement(1952818..1953507) Clostridium botulinum A str. ATCC 19397 5397785 YP_001384161.1 CDS CLB_1840 NC_009697.1 1953535 1953981 R lipoprotein complement(1953535..1953981) Clostridium botulinum A str. ATCC 19397 5394596 YP_001384162.1 CDS CLB_1841 NC_009697.1 1953960 1954400 R identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; hypothetical protein complement(1953960..1954400) Clostridium botulinum A str. ATCC 19397 5395179 YP_001384163.1 CDS CLB_1842 NC_009697.1 1954397 1954843 R identified by match to protein family HMM TIGR02532; hypothetical protein complement(1954397..1954843) Clostridium botulinum A str. ATCC 19397 5395323 YP_001384164.1 CDS CLB_1843 NC_009697.1 1954824 1955276 R hypothetical protein complement(1954824..1955276) Clostridium botulinum A str. ATCC 19397 5397137 YP_001384165.1 CDS CLB_1844 NC_009697.1 1955678 1956082 R identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; pilin complement(1955678..1956082) Clostridium botulinum A str. ATCC 19397 5394995 YP_001384166.1 CDS CLB_1845 NC_009697.1 1956268 1957458 R identified by match to protein family HMM PF00482; type II secretion system protein F complement(1956268..1957458) Clostridium botulinum A str. ATCC 19397 5394824 YP_001384167.1 CDS CLB_1846 NC_009697.1 1957603 1959132 R identified by match to protein family HMM PF00437; match to protein family HMM PF05157; general secretion pathway protein E complement(1957603..1959132) Clostridium botulinum A str. ATCC 19397 5395180 YP_001384168.1 CDS CLB_1847 NC_009697.1 1959281 1959409 R identified by Glimmer3; hypothetical protein complement(1959281..1959409) Clostridium botulinum A str. ATCC 19397 5397513 YP_001384169.1 CDS CLB_1848 NC_009697.1 1959505 1960578 R lipoprotein complement(1959505..1960578) Clostridium botulinum A str. ATCC 19397 5396692 YP_001384170.1 CDS dapF NC_009697.1 1960579 1961400 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(1960579..1961400) Clostridium botulinum A str. ATCC 19397 5396281 YP_001384171.1 CDS CLB_1850 NC_009697.1 1961654 1963384 D identified by match to protein family HMM PF05670; match to protein family HMM PF05833; fibronectin-binding protein 1961654..1963384 Clostridium botulinum A str. ATCC 19397 5395219 YP_001384172.1 CDS truA-1 NC_009697.1 1963453 1964193 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 1963453..1964193 Clostridium botulinum A str. ATCC 19397 5395680 YP_001384173.1 CDS CLB_1852 NC_009697.1 1964470 1964697 R identified by Glimmer3; hypothetical protein complement(1964470..1964697) Clostridium botulinum A str. ATCC 19397 5395826 YP_001384174.1 CDS CLB_1853 NC_009697.1 1964733 1965110 R identified by match to protein family HMM PF01230; HIT family protein complement(1964733..1965110) Clostridium botulinum A str. ATCC 19397 5397976 YP_001384175.1 CDS CLB_1854 NC_009697.1 1965621 1967024 D identified by match to protein family HMM PF00282; match to protein family HMM TIGR01788; glutamate decarboxylase 1965621..1967024 Clostridium botulinum A str. ATCC 19397 5394843 YP_001384176.1 CDS CLB_1855 NC_009697.1 1967457 1967798 R identified by Glimmer3; hypothetical protein complement(1967457..1967798) Clostridium botulinum A str. ATCC 19397 5395086 YP_001384177.1 CDS CLB_1856 NC_009697.1 1968303 1970012 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein complement(1968303..1970012) Clostridium botulinum A str. ATCC 19397 5397523 YP_001384178.1 CDS cloSI NC_009697.1 1970482 1972056 R identified by match to protein family HMM PF03415; match to protein family HMM TIGR02806; clostripain complement(1970482..1972056) Clostridium botulinum A str. ATCC 19397 5397352 YP_001384179.1 CDS CLB_1858 NC_009697.1 1972536 1973192 D hypothetical protein 1972536..1973192 Clostridium botulinum A str. ATCC 19397 5397424 YP_001384180.1 CDS CLB_1859 NC_009697.1 1973194 1973895 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1973194..1973895 Clostridium botulinum A str. ATCC 19397 5395877 YP_001384181.1 CDS CLB_1860 NC_009697.1 1973885 1975798 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 1973885..1975798 Clostridium botulinum A str. ATCC 19397 5397433 YP_001384182.1 CDS msrA NC_009697.1 1975969 1976442 R this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A complement(1975969..1976442) Clostridium botulinum A str. ATCC 19397 5397044 YP_001384183.1 CDS CLB_1862 NC_009697.1 1976832 1977623 D identified by match to protein family HMM PF00072; response regulator 1976832..1977623 Clostridium botulinum A str. ATCC 19397 5397111 YP_001384184.1 CDS CLB_1863 NC_009697.1 1977783 1979246 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase complement(1977783..1979246) Clostridium botulinum A str. ATCC 19397 5397335 YP_001384185.1 CDS CLB_1864 NC_009697.1 1979243 1979929 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(1979243..1979929) Clostridium botulinum A str. ATCC 19397 5396988 YP_001384186.1 CDS CLB_1865 NC_009697.1 1980212 1980988 R hypothetical protein complement(1980212..1980988) Clostridium botulinum A str. ATCC 19397 5397813 YP_001384187.1 CDS CLB_1866 NC_009697.1 1981144 1981995 R ABC transporter permease complement(1981144..1981995) Clostridium botulinum A str. ATCC 19397 5395906 YP_001384188.1 CDS CLB_1867 NC_009697.1 1981995 1982738 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1981995..1982738) Clostridium botulinum A str. ATCC 19397 5397031 YP_001384189.1 CDS CLB_1868 NC_009697.1 1982698 1982871 D identified by Glimmer3; hypothetical protein 1982698..1982871 Clostridium botulinum A str. ATCC 19397 5396497 YP_001384190.1 CDS CLB_1869 NC_009697.1 1983328 1985190 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease complement(1983328..1985190) Clostridium botulinum A str. ATCC 19397 5394644 YP_001384191.1 CDS CLB_1870 NC_009697.1 1985187 1987514 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease complement(1985187..1987514) Clostridium botulinum A str. ATCC 19397 5395793 YP_001384192.1 CDS CLB_1871 NC_009697.1 1987918 1988361 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1987918..1988361 Clostridium botulinum A str. ATCC 19397 5395117 YP_001384193.1 CDS moeB NC_009697.1 1988673 1989356 R identified by match to protein family HMM PF00899; molybdopterin biosynthesis protein MoeB complement(1988673..1989356) Clostridium botulinum A str. ATCC 19397 5394576 YP_001384194.1 CDS moaD NC_009697.1 1989358 1989585 R identified by match to protein family HMM PF02597; molybdopterin converting factor subunit 1 complement(1989358..1989585) Clostridium botulinum A str. ATCC 19397 5395665 YP_001384195.1 CDS aor NC_009697.1 1989738 1991555 R identified by match to protein family HMM PF01314; match to protein family HMM PF02730; aldehyde ferredoxin oxidoreductase, tungsten-containing complement(1989738..1991555) Clostridium botulinum A str. ATCC 19397 5396745 YP_001384196.1 CDS aorR NC_009697.1 1991964 1993859 R identified by match to protein family HMM PF00158; match to protein family HMM PF01590; match to protein family HMM PF02954; match to protein family HMM TIGR00229; aor transcriptional regulator complement(1991964..1993859) Clostridium botulinum A str. ATCC 19397 5396392 YP_001384197.1 CDS CLB_1876 NC_009697.1 1993909 1994349 R identified by match to protein family HMM PF03473; MOSC domain-containing protein complement(1993909..1994349) Clostridium botulinum A str. ATCC 19397 5395396 YP_001384198.1 CDS moaC NC_009697.1 1994351 1994830 R MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC complement(1994351..1994830) Clostridium botulinum A str. ATCC 19397 5396243 YP_001384199.1 CDS moaA NC_009697.1 1994834 1995793 R identified by match to protein family HMM PF04055; match to protein family HMM PF06463; match to protein family HMM TIGR02666; molybdenum cofactor biosynthesis protein A complement(1994834..1995793) Clostridium botulinum A str. ATCC 19397 5397415 YP_001384200.1 CDS CLB_1879 NC_009697.1 1995852 1997756 R identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177; molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein complement(1995852..1997756) Clostridium botulinum A str. ATCC 19397 5396868 YP_001384201.1 CDS moeA NC_009697.1 1997768 1998994 R identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177; molybdopterin biosynthesis enzyme MoeA complement(1997768..1998994) Clostridium botulinum A str. ATCC 19397 5394858 YP_001384202.1 CDS mog NC_009697.1 1999018 1999506 R identified by match to protein family HMM PF00994; match to protein family HMM TIGR00177; molybdopterin biosynthesis enzyme Mog complement(1999018..1999506) Clostridium botulinum A str. ATCC 19397 5397541 YP_001384203.1 CDS tupC NC_009697.1 1999601 2000293 R identified by match to protein family HMM PF00005; tungstate ABC transporter ATP-binding protein complement(1999601..2000293) Clostridium botulinum A str. ATCC 19397 5394732 YP_001384204.1 CDS tupB NC_009697.1 2000290 2000961 R identified by match to protein family HMM PF00528; tungstate ABC transporter permease complement(2000290..2000961) Clostridium botulinum A str. ATCC 19397 5397302 YP_001384205.1 CDS CLB_1884 NC_009697.1 2000970 2001821 R identified by match to protein family HMM PF01547; tungstate ABC transporter tungstate-binding protein complement(2000970..2001821) Clostridium botulinum A str. ATCC 19397 5397588 YP_001384206.1 CDS CLB_1885 NC_009697.1 2002040 2003362 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein complement(2002040..2003362) Clostridium botulinum A str. ATCC 19397 5396971 YP_001384207.1 CDS CLB_1886 NC_009697.1 2003362 2003559 R identified by Glimmer3; hypothetical protein complement(2003362..2003559) Clostridium botulinum A str. ATCC 19397 5397819 YP_001384208.1 CDS CLB_1887 NC_009697.1 2003800 2004444 R identified by match to protein family HMM PF09335; hypothetical protein complement(2003800..2004444) Clostridium botulinum A str. ATCC 19397 5397591 YP_001384209.1 CDS CLB_1888 NC_009697.1 2004766 2005437 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2004766..2005437) Clostridium botulinum A str. ATCC 19397 5395838 YP_001384210.1 CDS CLB_1889 NC_009697.1 2005452 2006915 R identified by match to protein family HMM PF02687; ABC transporter permease complement(2005452..2006915) Clostridium botulinum A str. ATCC 19397 5396518 YP_001384211.1 CDS CLB_1890 NC_009697.1 2007251 2007394 D identified by Glimmer3; hypothetical protein 2007251..2007394 Clostridium botulinum A str. ATCC 19397 5397936 YP_001384212.1 CDS CLB_1891 NC_009697.1 2007714 2009471 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease complement(2007714..2009471) Clostridium botulinum A str. ATCC 19397 5396425 YP_001384213.1 CDS CLB_1892 NC_009697.1 2009468 2011198 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease complement(2009468..2011198) Clostridium botulinum A str. ATCC 19397 5396426 YP_001384214.1 CDS CLB_1893 NC_009697.1 2011313 2012134 D identified by match to protein family HMM PF00376; ABC transporter 2011313..2012134 Clostridium botulinum A str. ATCC 19397 5396638 YP_001384215.1 CDS CLB_1894 NC_009697.1 2012553 2013179 D identified by match to protein family HMM PF03358; NADPH-dependent FMN reductase 2012553..2013179 Clostridium botulinum A str. ATCC 19397 5397891 YP_001384216.1 CDS CLB_1896 NC_009697.1 2014473 2015471 D identified by match to protein family HMM PF00560; internalin 2014473..2015471 Clostridium botulinum A str. ATCC 19397 5396024 YP_001384217.1 CDS CLB_1897 NC_009697.1 2015493 2017541 D identified by match to protein family HMM PF02839; match to protein family HMM TIGR03296; carbohydrate binding protein 2015493..2017541 Clostridium botulinum A str. ATCC 19397 5396003 YP_001384218.1 CDS CLB_1898 NC_009697.1 2017703 2019793 R identified by match to protein family HMM PF00158; match to protein family HMM PF07728; sigma-54 dependent transcriptional regulator complement(2017703..2019793) Clostridium botulinum A str. ATCC 19397 5394587 YP_001384219.1 CDS CLB_1899 NC_009697.1 2020156 2020410 R hypothetical protein complement(2020156..2020410) Clostridium botulinum A str. ATCC 19397 5395938 YP_001384220.1 CDS CLB_1900 NC_009697.1 2020423 2020791 R identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004; endoribonuclease L-PSP complement(2020423..2020791) Clostridium botulinum A str. ATCC 19397 5397306 YP_001384221.1 CDS CLB_1901 NC_009697.1 2020833 2022128 R identified by match to protein family HMM PF00375; sodium:dicarboxylate symporter family protein complement(2020833..2022128) Clostridium botulinum A str. ATCC 19397 5397675 YP_001384222.1 CDS CLB_1902 NC_009697.1 2022150 2023319 R identified by match to protein family HMM PF00155; aminotransferase, classes I and II complement(2022150..2023319) Clostridium botulinum A str. ATCC 19397 5394641 YP_001384223.1 CDS CLB_1903 NC_009697.1 2023633 2024925 D identified by match to protein family HMM PF06354; hypothetical protein 2023633..2024925 Clostridium botulinum A str. ATCC 19397 5396896 YP_001384224.1 CDS CLB_1904 NC_009697.1 2024961 2025095 D identified by Glimmer3; hypothetical protein 2024961..2025095 Clostridium botulinum A str. ATCC 19397 5398204 YP_001384225.1 CDS CLB_1905 NC_009697.1 2025265 2026260 D identified by match to protein family HMM PF00560; internalin 2025265..2026260 Clostridium botulinum A str. ATCC 19397 5395910 YP_001384226.1 CDS CLB_1906 NC_009697.1 2026281 2028500 D identified by match to protein family HMM TIGR03296; hypothetical protein 2026281..2028500 Clostridium botulinum A str. ATCC 19397 5398010 YP_001384227.1 CDS CLB_1907 NC_009697.1 2028701 2030140 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase complement(2028701..2030140) Clostridium botulinum A str. ATCC 19397 5397244 YP_001384228.1 CDS CLB_1908 NC_009697.1 2030130 2030795 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(2030130..2030795) Clostridium botulinum A str. ATCC 19397 5395122 YP_001384229.1 CDS CLB_1909 NC_009697.1 2030956 2031081 R identified by Glimmer3; hypothetical protein complement(2030956..2031081) Clostridium botulinum A str. ATCC 19397 5396168 YP_001384230.1 CDS CLB_1910 NC_009697.1 2031295 2032110 R identified by match to protein family HMM PF02596; hypothetical protein complement(2031295..2032110) Clostridium botulinum A str. ATCC 19397 5397690 YP_001384231.1 CDS CLB_1911 NC_009697.1 2032136 2032861 R identified by match to protein family HMM PF02361; ABC transporter permease complement(2032136..2032861) Clostridium botulinum A str. ATCC 19397 5395828 YP_001384232.1 CDS CLB_1912 NC_009697.1 2032906 2034339 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2032906..2034339) Clostridium botulinum A str. ATCC 19397 5396089 YP_001384233.1 CDS CLB_1913 NC_009697.1 2034342 2034908 R ABC transporter permease complement(2034342..2034908) Clostridium botulinum A str. ATCC 19397 5396622 YP_001384234.1 CDS CLB_1914 NC_009697.1 2035069 2036136 R identified by match to protein family HMM PF01168; alanine racemase complement(2035069..2036136) Clostridium botulinum A str. ATCC 19397 5397430 YP_001384235.1 CDS CLB_1915 NC_009697.1 2036525 2037610 D identified by match to protein family HMM PF03845; match to protein family HMM TIGR00912; spore germination protein 2036525..2037610 Clostridium botulinum A str. ATCC 19397 5396758 YP_001384236.1 CDS CLB_1916 NC_009697.1 2037693 2039195 D identified by match to protein family HMM PF03323; spore germination protein 2037693..2039195 Clostridium botulinum A str. ATCC 19397 5396776 YP_001384237.1 CDS CLB_1917 NC_009697.1 2039185 2040273 D identified by match to protein family HMM PF03845; match to protein family HMM TIGR00912; spore germination protein 2039185..2040273 Clostridium botulinum A str. ATCC 19397 5396380 YP_001384238.1 CDS CLB_1918 NC_009697.1 2040263 2041375 D identified by match to protein family HMM PF05504; match to protein family HMM TIGR02887; Ger(x)C family germination protein 2040263..2041375 Clostridium botulinum A str. ATCC 19397 5397361 YP_001384239.1 CDS CLB_1919 NC_009697.1 2041417 2042526 D identified by match to protein family HMM PF03845; match to protein family HMM TIGR00912; spore germination protein 2041417..2042526 Clostridium botulinum A str. ATCC 19397 5397955 YP_001384240.1 CDS CLB_1920 NC_009697.1 2042554 2042982 R identified by match to protein family HMM TIGR01909; hypothetical protein complement(2042554..2042982) Clostridium botulinum A str. ATCC 19397 5395577 YP_001384241.1 CDS pcaC-2 NC_009697.1 2043277 2043609 D identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778; 4-carboxymuconolactone decarboxylase 2043277..2043609 Clostridium botulinum A str. ATCC 19397 5397900 YP_001384242.1 CDS CLB_1922 NC_009697.1 2043622 2044602 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 2043622..2044602 Clostridium botulinum A str. ATCC 19397 5396808 YP_001384243.1 CDS CLB_1923 NC_009697.1 2044783 2045538 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 2044783..2045538 Clostridium botulinum A str. ATCC 19397 5397716 YP_001384244.1 CDS CLB_1924 NC_009697.1 2045756 2047186 R the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter complement(2045756..2047186) Clostridium botulinum A str. ATCC 19397 5395141 YP_001384245.1 CDS hsp90 NC_009697.1 2047784 2049664 R molecular chaperone; heat shock protein 90 complement(2047784..2049664) Clostridium botulinum A str. ATCC 19397 5396727 YP_001384246.1 CDS CLB_1926 NC_009697.1 2050209 2051774 D identified by match to protein family HMM PF00488; MutS domain-containing protein 2050209..2051774 Clostridium botulinum A str. ATCC 19397 5396040 YP_001384247.1 CDS treP NC_009697.1 2052256 2053683 D identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR01992; PTS system, trehalose-specific IIBC component 2052256..2053683 Clostridium botulinum A str. ATCC 19397 5396222 YP_001384248.1 CDS treC NC_009697.1 2053765 2055432 D identified by match to protein family HMM PF00128; match to protein family HMM TIGR02403; alpha,alpha-phosphotrehalase 2053765..2055432 Clostridium botulinum A str. ATCC 19397 5397722 YP_001384249.1 CDS treR NC_009697.1 2055465 2056175 D identified by match to protein family HMM PF00392; match to protein family HMM PF07702; match to protein family HMM TIGR02404; trehalose operon repressor 2055465..2056175 Clostridium botulinum A str. ATCC 19397 5397906 YP_001384250.1 CDS CLB_1930 NC_009697.1 2056537 2056977 R identified by match to protein family HMM PF00359; match to protein family HMM TIGR00848; PTS system fructose family transporter subunit IIA complement(2056537..2056977) Clostridium botulinum A str. ATCC 19397 5396061 YP_001384251.1 CDS CLB_1931 NC_009697.1 2057250 2058647 R identified by match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR01427; PTS system fructose family transporter subunit IIBC complement(2057250..2058647) Clostridium botulinum A str. ATCC 19397 5395359 YP_001384252.1 CDS CLB_1932 NC_009697.1 2058648 2059571 R identified by match to protein family HMM PF00294; match to protein family HMM TIGR03168; PfkB family kinase complement(2058648..2059571) Clostridium botulinum A str. ATCC 19397 5394621 YP_001384253.1 CDS gatY NC_009697.1 2059591 2060451 R catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway; tagatose-bisphosphate aldolase complement(2059591..2060451) Clostridium botulinum A str. ATCC 19397 5398165 YP_001384254.1 CDS CLB_1934 NC_009697.1 2060651 2061388 R identified by match to protein family HMM PF01380; match to protein family HMM PF01418; transcriptional regulator complement(2060651..2061388) Clostridium botulinum A str. ATCC 19397 5394914 YP_001384255.1 CDS CLB_1935 NC_009697.1 2061505 2061879 R hypothetical protein complement(2061505..2061879) Clostridium botulinum A str. ATCC 19397 5395366 YP_001384256.1 CDS CLB_1936 NC_009697.1 2062241 2062636 D identified by match to protein family HMM PF01042; endoribonuclease L-PSP family protein 2062241..2062636 Clostridium botulinum A str. ATCC 19397 5396366 YP_001384257.1 CDS CLB_1937 NC_009697.1 2062984 2063853 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(2062984..2063853) Clostridium botulinum A str. ATCC 19397 5396656 YP_001384258.1 CDS CLB_1938 NC_009697.1 2064117 2064239 R identified by Glimmer3; hypothetical protein complement(2064117..2064239) Clostridium botulinum A str. ATCC 19397 5397304 YP_001384259.1 CDS gldA NC_009697.1 2064429 2065520 D forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; glycerol dehydrogenase 2064429..2065520 Clostridium botulinum A str. ATCC 19397 5394804 YP_001384260.1 CDS CLB_1940 NC_009697.1 2065768 2065881 R identified by Glimmer3; hypothetical protein complement(2065768..2065881) Clostridium botulinum A str. ATCC 19397 5396031 YP_001384261.1 CDS CLB_1941 NC_009697.1 2066012 2067661 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein complement(2066012..2067661) Clostridium botulinum A str. ATCC 19397 5394704 YP_001384262.1 CDS CLB_1942 NC_009697.1 2067655 2067768 R identified by Glimmer3; hypothetical protein complement(2067655..2067768) Clostridium botulinum A str. ATCC 19397 5397483 YP_001384263.1 CDS CLB_1943 NC_009697.1 2067833 2068894 R identified by match to protein family HMM PF01168; alanine racemase complement(2067833..2068894) Clostridium botulinum A str. ATCC 19397 5397091 YP_001384264.1 CDS CLB_1944 NC_009697.1 2069251 2069529 R hypothetical protein complement(2069251..2069529) Clostridium botulinum A str. ATCC 19397 5395303 YP_001384265.1 CDS CLB_1945 NC_009697.1 2069999 2071063 D identified by match to protein family HMM PF01118; match to protein family HMM PF01408; match to protein family HMM PF02894; oxidoreductase family protein 2069999..2071063 Clostridium botulinum A str. ATCC 19397 5397978 YP_001384266.1 CDS CLB_1946 NC_009697.1 2071184 2071729 R Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis; adenine phosphoribosyltransferase complement(2071184..2071729) Clostridium botulinum A str. ATCC 19397 5396816 YP_001384267.1 CDS CLB_1947 NC_009697.1 2071745 2072809 R identified by match to protein family HMM PF00860; xanthine/uracil permease family protein complement(2071745..2072809) Clostridium botulinum A str. ATCC 19397 5396790 YP_001384268.1 CDS CLB_1948 NC_009697.1 2073252 2073800 R identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase complement(2073252..2073800) Clostridium botulinum A str. ATCC 19397 5397374 YP_001384269.1 CDS CLB_1949 NC_009697.1 2074034 2075338 R identified by match to protein family HMM PF06354; hypothetical protein complement(2074034..2075338) Clostridium botulinum A str. ATCC 19397 5395438 YP_001384270.1 CDS CLB_1950 NC_009697.1 2075598 2077373 R identified by match to protein family HMM PF00158; sigma-54 dependent transcriptional regulator complement(2075598..2077373) Clostridium botulinum A str. ATCC 19397 5397682 YP_001384271.1 CDS CLB_1951 NC_009697.1 2077839 2078969 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; DEAD/DEAH box helicase 2077839..2078969 Clostridium botulinum A str. ATCC 19397 5394784 YP_001384272.1 CDS CLB_1952 NC_009697.1 2079289 2080086 D identified by match to protein family HMM PF00188; match to protein family HMM TIGR02909; SCP-like extracellular protein 2079289..2080086 Clostridium botulinum A str. ATCC 19397 5397504 YP_001384273.1 CDS CLB_1953 NC_009697.1 2080189 2081535 R identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator complement(2080189..2081535) Clostridium botulinum A str. ATCC 19397 5396872 YP_001384274.1 CDS CLB_1954 NC_009697.1 2081684 2082592 D identified by match to protein family HMM PF00892; hypothetical protein 2081684..2082592 Clostridium botulinum A str. ATCC 19397 5396936 YP_001384275.1 CDS aspB-2 NC_009697.1 2082890 2084041 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(2082890..2084041) Clostridium botulinum A str. ATCC 19397 5398194 YP_001384276.1 CDS CLB_1956 NC_009697.1 2084061 2084783 R identified by match to protein family HMM PF00005; polar amino acid ABC transporter ATP-binding protein complement(2084061..2084783) Clostridium botulinum A str. ATCC 19397 5396560 YP_001384277.1 CDS CLB_1957 NC_009697.1 2084770 2085456 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease complement(2084770..2085456) Clostridium botulinum A str. ATCC 19397 5394946 YP_001384278.1 CDS CLB_1958 NC_009697.1 2085526 2086344 R identified by match to protein family HMM PF00497; polar amino acid ABC transporter amino acid-binding protein complement(2085526..2086344) Clostridium botulinum A str. ATCC 19397 5395148 YP_001384279.1 CDS CLB_1959 NC_009697.1 2086430 2087710 R hypothetical protein complement(2086430..2087710) Clostridium botulinum A str. ATCC 19397 5397419 YP_001384280.1 CDS CLB_1960 NC_009697.1 2088075 2089214 R identified by match to protein family HMM PF00266; class V aminotransferase complement(2088075..2089214) Clostridium botulinum A str. ATCC 19397 5396768 YP_001384281.1 CDS cat-3 NC_009697.1 2089327 2089992 R identified by match to protein family HMM PF00302; chloramphenicol acetyltransferase complement(2089327..2089992) Clostridium botulinum A str. ATCC 19397 5396583 YP_001384282.1 CDS CLB_1962 NC_009697.1 2090487 2090699 R hypothetical protein complement(2090487..2090699) Clostridium botulinum A str. ATCC 19397 5395330 YP_001384283.1 CDS CLB_1963 NC_009697.1 2090799 2090936 R identified by Glimmer3; hypothetical protein complement(2090799..2090936) Clostridium botulinum A str. ATCC 19397 5397680 YP_001384284.1 CDS CLB_1964 NC_009697.1 2090960 2091181 R hypothetical protein complement(2090960..2091181) Clostridium botulinum A str. ATCC 19397 5395612 YP_001384285.1 CDS CLB_1966 NC_009697.1 2091754 2092470 R hypothetical protein complement(2091754..2092470) Clostridium botulinum A str. ATCC 19397 5395926 YP_001384286.1 CDS CLB_1967 NC_009697.1 2092695 2092850 R identified by match to protein family HMM PF01381; DNA-binding protein complement(2092695..2092850) Clostridium botulinum A str. ATCC 19397 5396120 YP_001384287.1 CDS CLB_1968 NC_009697.1 2093033 2093170 R identified by Glimmer3; hypothetical protein complement(2093033..2093170) Clostridium botulinum A str. ATCC 19397 5395574 YP_001384288.1 CDS CLB_1969 NC_009697.1 2093260 2094609 R identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924; amino acid/peptide transporter complement(2093260..2094609) Clostridium botulinum A str. ATCC 19397 5397481 YP_001384289.1 CDS CLB_1970 NC_009697.1 2094920 2096266 R identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924; amino acid/peptide transporter complement(2094920..2096266) Clostridium botulinum A str. ATCC 19397 5398054 YP_001384290.1 CDS pepQ NC_009697.1 2096775 2097863 D identified by match to protein family HMM PF00557; match to protein family HMM PF01321; proline dipeptidase 2096775..2097863 Clostridium botulinum A str. ATCC 19397 5395217 YP_001384291.1 CDS pepIP NC_009697.1 2097945 2098826 D identified by match to protein family HMM PF00561; match to protein family HMM TIGR01250; proline iminopeptidase 2097945..2098826 Clostridium botulinum A str. ATCC 19397 5397782 YP_001384292.1 CDS CLB_1973 NC_009697.1 2098976 2099101 R identified by Glimmer3; hypothetical protein complement(2098976..2099101) Clostridium botulinum A str. ATCC 19397 5397821 YP_001384293.1 CDS CLB_1974 NC_009697.1 2099118 2100611 R identified by match to protein family HMM PF00209; sodium:neurotransmitter symporter family protein complement(2099118..2100611) Clostridium botulinum A str. ATCC 19397 5397449 YP_001384294.1 CDS CLB_1975 NC_009697.1 2101020 2102414 R identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator complement(2101020..2102414) Clostridium botulinum A str. ATCC 19397 5396328 YP_001384295.1 CDS CLB_1976 NC_009697.1 2102532 2103311 D identified by match to protein family HMM PF02567; match to protein family HMM TIGR00654; PhzF family phenazine biosynthesis protein 2102532..2103311 Clostridium botulinum A str. ATCC 19397 5395687 YP_001384296.1 CDS CLB_1978 NC_009697.1 2103907 2104554 R identified by Glimmer3; hypothetical protein complement(2103907..2104554) Clostridium botulinum A str. ATCC 19397 5395786 YP_001384297.1 CDS CLB_1979 NC_009697.1 2104787 2107264 R thrombospondin type 3 repeat-containing protein complement(2104787..2107264) Clostridium botulinum A str. ATCC 19397 5395478 YP_001384298.1 CDS CLB_1980 NC_009697.1 2107737 2108237 R identified by match to protein family HMM PF00881; nitroreductase family protein complement(2107737..2108237) Clostridium botulinum A str. ATCC 19397 5397642 YP_001384299.1 CDS CLB_1981 NC_009697.1 2108342 2110285 R identified by Glimmer3; hypothetical protein complement(2108342..2110285) Clostridium botulinum A str. ATCC 19397 5395262 YP_001384300.1 CDS CLB_1982 NC_009697.1 2110300 2111535 R identified by Glimmer3; hypothetical protein complement(2110300..2111535) Clostridium botulinum A str. ATCC 19397 5395447 YP_001384301.1 CDS CLB_1983 NC_009697.1 2111532 2113643 R hypothetical protein complement(2111532..2113643) Clostridium botulinum A str. ATCC 19397 5396409 YP_001384302.1 CDS CLB_1984 NC_009697.1 2113765 2115558 R similar to streptococcal 67 kDa myosin-cross-reactive antigen family protein; in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; myosin-cross-reactive antigen complement(2113765..2115558) Clostridium botulinum A str. ATCC 19397 5397475 YP_001384303.1 CDS CLB_1985 NC_009697.1 2115862 2116431 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(2115862..2116431) Clostridium botulinum A str. ATCC 19397 5395767 YP_003264526.1 CDS CLB_1986 NC_009697.1 2116607 2117050 R hypothetical protein complement(2116607..2117050) Clostridium botulinum A str. ATCC 19397 5395628 YP_001384304.1 CDS CLB_1988 NC_009697.1 2117917 2118528 R identified by Glimmer3; hypothetical protein complement(2117917..2118528) Clostridium botulinum A str. ATCC 19397 5397022 YP_001384305.1 CDS CLB_1989 NC_009697.1 2118503 2119510 D identified by Glimmer3; hypothetical protein 2118503..2119510 Clostridium botulinum A str. ATCC 19397 5395479 YP_001384306.1 CDS CLB_1990 NC_009697.1 2119970 2121031 R identified by Glimmer3; hypothetical protein complement(2119970..2121031) Clostridium botulinum A str. ATCC 19397 5396169 YP_001384307.1 CDS CLB_1991 NC_009697.1 2121075 2121719 R identified by match to protein family HMM PF00132; hexapeptide repeat-containing transferase complement(2121075..2121719) Clostridium botulinum A str. ATCC 19397 5396749 YP_001384308.1 CDS CLB_1992 NC_009697.1 2121811 2122950 R identified by match to protein family HMM PF01041; aminotransferase complement(2121811..2122950) Clostridium botulinum A str. ATCC 19397 5396196 YP_001384309.1 CDS CLB_1993 NC_009697.1 2122996 2123895 R identified by Glimmer3; hypothetical protein complement(2122996..2123895) Clostridium botulinum A str. ATCC 19397 5396329 YP_001384310.1 CDS CLB_1994 NC_009697.1 2124097 2125158 D identified by match to protein family HMM PF00483; match to protein family HMM TIGR01208; glucose-1-phosphate thymidylyltransferase 2124097..2125158 Clostridium botulinum A str. ATCC 19397 5394594 YP_001384311.1 CDS rfbB NC_009697.1 2125200 2126180 D identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01181; dTDP-glucose 4,6-dehydratase 2125200..2126180 Clostridium botulinum A str. ATCC 19397 5394851 YP_001384312.1 CDS CLB_1996 NC_009697.1 2126457 2126750 D hypothetical protein 2126457..2126750 Clostridium botulinum A str. ATCC 19397 5395448 YP_001384313.1 CDS CLB_1997 NC_009697.1 2127001 2127294 D hypothetical protein 2127001..2127294 Clostridium botulinum A str. ATCC 19397 5396801 YP_001384314.1 CDS CLB_1998 NC_009697.1 2127706 2127858 R identified by Glimmer3; hypothetical protein complement(2127706..2127858) Clostridium botulinum A str. ATCC 19397 5395373 YP_001384315.1 CDS CLB_1999 NC_009697.1 2128189 2128338 R identified by Glimmer3; hypothetical protein complement(2128189..2128338) Clostridium botulinum A str. ATCC 19397 5396787 YP_001384316.1 CDS CLB_2000 NC_009697.1 2128331 2129620 R lipase complement(2128331..2129620) Clostridium botulinum A str. ATCC 19397 5396655 YP_001384317.1 CDS CLB_2001 NC_009697.1 2130471 2131145 R identified by match to protein family HMM PF04892; vanZF protein complement(2130471..2131145) Clostridium botulinum A str. ATCC 19397 5395595 YP_001384318.1 CDS CLB_2002 NC_009697.1 2131395 2131661 R identified by Glimmer3; hypothetical protein complement(2131395..2131661) Clostridium botulinum A str. ATCC 19397 5397165 YP_001384319.1 CDS CLB_2003 NC_009697.1 2131929 2132570 R ABC transporter permease complement(2131929..2132570) Clostridium botulinum A str. ATCC 19397 5398215 YP_001384320.1 CDS CLB_2004 NC_009697.1 2132564 2133430 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2132564..2133430) Clostridium botulinum A str. ATCC 19397 5394924 YP_001384321.1 CDS CLB_2005 NC_009697.1 2133430 2133807 R identified by match to protein family HMM PF00392; GntR family transcriptional regulator complement(2133430..2133807) Clostridium botulinum A str. ATCC 19397 5396537 YP_001384322.1 CDS CLB_2006 NC_009697.1 2134435 2135619 R identified by match to protein family HMM PF00201; match to protein family HMM PF04101; match to protein family HMM TIGR01426; glycosyl transferase family protein complement(2134435..2135619) Clostridium botulinum A str. ATCC 19397 5395080 YP_001384323.1 CDS CLB_2007 NC_009697.1 2135612 2135917 R identified by match to protein family HMM PF04014; match to protein family HMM TIGR01439; AbrB family transcriptional regulator complement(2135612..2135917) Clostridium botulinum A str. ATCC 19397 5398086 YP_001384324.1 CDS CLB_2008 NC_009697.1 2136166 2136963 R hypothetical protein complement(2136166..2136963) Clostridium botulinum A str. ATCC 19397 5395948 YP_001384325.1 CDS codA NC_009697.1 2137275 2138540 R Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase complement(2137275..2138540) Clostridium botulinum A str. ATCC 19397 5397562 YP_001384326.1 CDS codB NC_009697.1 2138584 2139855 R identified by match to protein family HMM PF02133; cytosine permease complement(2138584..2139855) Clostridium botulinum A str. ATCC 19397 5394564 YP_001384327.1 CDS CLB_2012 NC_009697.1 2140200 2140331 R identified by Glimmer3; hypothetical protein complement(2140200..2140331) Clostridium botulinum A str. ATCC 19397 5394560 YP_001384328.1 CDS CLB_2013 NC_009697.1 2140498 2141622 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(2140498..2141622) Clostridium botulinum A str. ATCC 19397 5395748 YP_001384329.1 CDS CLB_2014 NC_009697.1 2141636 2141764 R identified by Glimmer3; hypothetical protein complement(2141636..2141764) Clostridium botulinum A str. ATCC 19397 5395869 YP_001384330.1 CDS CLB_2015 NC_009697.1 2142529 2143992 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2142529..2143992) Clostridium botulinum A str. ATCC 19397 5395985 YP_001384331.1 CDS CLB_2016 NC_009697.1 2144006 2144731 R identified by match to protein family HMM PF02361; ABC transporter permease complement(2144006..2144731) Clostridium botulinum A str. ATCC 19397 5397515 YP_001384332.1 CDS CLB_2017 NC_009697.1 2144728 2145339 R identified by match to protein family HMM TIGR02185; hypothetical protein complement(2144728..2145339) Clostridium botulinum A str. ATCC 19397 5394918 YP_001384333.1 CDS CLB_2018 NC_009697.1 2145559 2146521 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 2145559..2146521 Clostridium botulinum A str. ATCC 19397 5395904 YP_001384334.1 CDS CLB_2019 NC_009697.1 2146891 2147373 R identified by match to protein family HMM PF00583; acetyltransferase complement(2146891..2147373) Clostridium botulinum A str. ATCC 19397 5398216 YP_001384335.1 CDS CLB_2020 NC_009697.1 2147863 2148384 R identified by Glimmer3; hypothetical protein complement(2147863..2148384) Clostridium botulinum A str. ATCC 19397 5396555 YP_001384336.1 CDS CLB_2021 NC_009697.1 2148658 2149473 R hypothetical protein complement(2148658..2149473) Clostridium botulinum A str. ATCC 19397 5398068 YP_001384337.1 CDS CLB_2022 NC_009697.1 2149655 2150053 D identified by match to protein family HMM PF00293; mutator mutT protein 2149655..2150053 Clostridium botulinum A str. ATCC 19397 5396349 YP_001384338.1 CDS CLB_2023 NC_009697.1 2150064 2152970 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; restriction/helicase domain-containing protein complement(2150064..2152970) Clostridium botulinum A str. ATCC 19397 5396259 YP_001384339.1 CDS CLB_2024 NC_009697.1 2153028 2153144 R identified by Glimmer3; hypothetical protein complement(2153028..2153144) Clostridium botulinum A str. ATCC 19397 5395364 YP_001384340.1 CDS CLB_2025 NC_009697.1 2153543 2153671 R identified by Glimmer3; hypothetical protein complement(2153543..2153671) Clostridium botulinum A str. ATCC 19397 5395771 YP_001384341.1 CDS CLB_2026 NC_009697.1 2153966 2155747 R identified by match to protein family HMM PF00580; ATP-dependent DNA helicase UvrD complement(2153966..2155747) Clostridium botulinum A str. ATCC 19397 5398074 YP_001384342.1 CDS CLB_2027 NC_009697.1 2155740 2157779 R hypothetical protein complement(2155740..2157779) Clostridium botulinum A str. ATCC 19397 5395125 YP_001384343.1 CDS CLB_2028 NC_009697.1 2158185 2158406 R identified by Glimmer3; hypothetical protein complement(2158185..2158406) Clostridium botulinum A str. ATCC 19397 5398187 YP_001384344.1 CDS CLB_2029 NC_009697.1 2158470 2158595 R identified by Glimmer3; hypothetical protein complement(2158470..2158595) Clostridium botulinum A str. ATCC 19397 5398197 YP_001384345.1 CDS CLB_2030 NC_009697.1 2158851 2159471 R hypothetical protein complement(2158851..2159471) Clostridium botulinum A str. ATCC 19397 5395165 YP_001384346.1 CDS CLB_2031 NC_009697.1 2159719 2160117 R identified by Glimmer3; hypothetical protein complement(2159719..2160117) Clostridium botulinum A str. ATCC 19397 5397232 YP_001384347.1 CDS CLB_2032 NC_009697.1 2160135 2160989 R identified by Glimmer3; hypothetical protein complement(2160135..2160989) Clostridium botulinum A str. ATCC 19397 5398030 YP_001384348.1 CDS CLB_2033 NC_009697.1 2161305 2162255 R identified by Glimmer3; hypothetical protein complement(2161305..2162255) Clostridium botulinum A str. ATCC 19397 5397574 YP_001384349.1 CDS CLB_2034 NC_009697.1 2162325 2162474 R identified by Glimmer3; hypothetical protein complement(2162325..2162474) Clostridium botulinum A str. ATCC 19397 5396510 YP_001384350.1 CDS CLB_2035 NC_009697.1 2162803 2163687 R identified by match to protein family HMM PF00165; match to protein family HMM PF06445; AraC family transcriptional regulator complement(2162803..2163687) Clostridium botulinum A str. ATCC 19397 5395893 YP_001384351.1 CDS CLB_2036 NC_009697.1 2163736 2164641 R identified by match to protein family HMM PF00561; alpha/beta hydrolase complement(2163736..2164641) Clostridium botulinum A str. ATCC 19397 5397768 YP_001384352.1 CDS CLB_2037 NC_009697.1 2164762 2165175 R tetracycline resistance domain-containing protein complement(2164762..2165175) Clostridium botulinum A str. ATCC 19397 5397823 YP_001384353.1 CDS CLB_2038 NC_009697.1 2165360 2166283 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD-dependent epimerase/dehydratase family protein complement(2165360..2166283) Clostridium botulinum A str. ATCC 19397 5396604 YP_001384354.1 CDS CLB_2039 NC_009697.1 2166578 2167927 D identified by match to protein family HMM PF00535; glycosyl transferase 2166578..2167927 Clostridium botulinum A str. ATCC 19397 5396406 YP_001384355.1 CDS CLB_2040 NC_009697.1 2167951 2170575 D identified by match to protein family HMM PF00534; match to protein family HMM PF00535; glycosyl transferase family protein 2167951..2170575 Clostridium botulinum A str. ATCC 19397 5396246 YP_001384356.1 CDS CLB_2041 NC_009697.1 2170931 2172886 R identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03764; match to protein family HMM TIGR00231; tetracycline resistance protein complement(2170931..2172886) Clostridium botulinum A str. ATCC 19397 5397830 YP_001384357.1 CDS CLB_2042 NC_009697.1 2173416 2175086 R identified by Glimmer3; hypothetical protein complement(2173416..2175086) Clostridium botulinum A str. ATCC 19397 5397503 YP_001384358.1 CDS CLB_2043 NC_009697.1 2175635 2175925 R identified by match to protein family HMM PF00936; microcompartments family protein complement(2175635..2175925) Clostridium botulinum A str. ATCC 19397 5395618 YP_001384359.1 CDS CLB_2044 NC_009697.1 2175999 2176649 R identified by match to protein family HMM PF06130; propanediol utilization protein PduL-like protein complement(2175999..2176649) Clostridium botulinum A str. ATCC 19397 5397425 YP_001384360.1 CDS eutE NC_009697.1 2176649 2178247 R identified by match to protein family HMM TIGR02518; acetaldehyde dehydrogenase complement(2176649..2178247) Clostridium botulinum A str. ATCC 19397 5396908 YP_001384361.1 CDS CLB_2046 NC_009697.1 2178282 2179079 R identified by match to protein family HMM PF00936; microcompartments family protein complement(2178282..2179079) Clostridium botulinum A str. ATCC 19397 5396480 YP_001384362.1 CDS CLB_2047 NC_009697.1 2179100 2179762 R identified by match to protein family HMM PF05899; match to protein family HMM PF06249; ethanolamine utilization protein EutQ-like protein complement(2179100..2179762) Clostridium botulinum A str. ATCC 19397 5396834 YP_001384363.1 CDS CLB_2048 NC_009697.1 2179961 2180224 R identified by match to protein family HMM PF03319; polyhedral organelle formation protein complement(2179961..2180224) Clostridium botulinum A str. ATCC 19397 5395298 YP_001384364.1 CDS CLB_2049 NC_009697.1 2180221 2180523 R identified by match to protein family HMM PF00936; hypothetical protein complement(2180221..2180523) Clostridium botulinum A str. ATCC 19397 5394646 YP_001384365.1 CDS CLB_2050 NC_009697.1 2180601 2181446 R identified by match to protein family HMM TIGR02529; ethanolamine utilization protein EutJ family protein complement(2180601..2181446) Clostridium botulinum A str. ATCC 19397 5397345 YP_001384366.1 CDS CLB_2051 NC_009697.1 2181428 2182156 R hypothetical protein complement(2181428..2182156) Clostridium botulinum A str. ATCC 19397 5397651 YP_001384367.1 CDS CLB_2052 NC_009697.1 2182163 2182609 R EutP/PduV family GTP-binding protein complement(2182163..2182609) Clostridium botulinum A str. ATCC 19397 5398167 YP_001384368.1 CDS CLB_2053 NC_009697.1 2182606 2182959 R identified by match to protein family HMM PF00936; ethanolamine utilization protein EutS-like protein complement(2182606..2182959) Clostridium botulinum A str. ATCC 19397 5395989 YP_001384369.1 CDS CLB_2054 NC_009697.1 2182999 2183952 R identified by match to protein family HMM PF00037; match to protein family HMM PF04055; match to protein family HMM TIGR02494; glycyl-radical enzyme activating family protein complement(2182999..2183952) Clostridium botulinum A str. ATCC 19397 5397045 YP_001384370.1 CDS CLB_2055 NC_009697.1 2184116 2186656 R identified by match to protein family HMM PF01228; match to protein family HMM PF02901; formate acetyltransferase complement(2184116..2186656) Clostridium botulinum A str. ATCC 19397 5398188 YP_001384371.1 CDS CLB_2056 NC_009697.1 2186706 2188199 R aldehyde dehydrogenase complement(2186706..2188199) Clostridium botulinum A str. ATCC 19397 5397903 YP_001384372.1 CDS CLB_2057 NC_009697.1 2188237 2188545 R identified by match to protein family HMM PF00936; microcompartments family protein complement(2188237..2188545) Clostridium botulinum A str. ATCC 19397 5395913 YP_001384373.1 CDS CLB_2058 NC_009697.1 2188569 2188865 R identified by match to protein family HMM PF00936; microcompartments family protein complement(2188569..2188865) Clostridium botulinum A str. ATCC 19397 5395974 YP_001384374.1 CDS CLB_2059 NC_009697.1 2188938 2189090 R identified by Glimmer3; hypothetical protein complement(2188938..2189090) Clostridium botulinum A str. ATCC 19397 5398077 YP_001384375.1 CDS CLB_2060 NC_009697.1 2189169 2189435 R identified by Glimmer3; hypothetical protein complement(2189169..2189435) Clostridium botulinum A str. ATCC 19397 5394895 YP_001384376.1 CDS CLB_2061 NC_009697.1 2189422 2190534 R hypothetical protein complement(2189422..2190534) Clostridium botulinum A str. ATCC 19397 5394715 YP_001384377.1 CDS CLB_2062 NC_009697.1 2191020 2191850 R identified by match to protein family HMM PF00376; MerR family transcriptional regulator complement(2191020..2191850) Clostridium botulinum A str. ATCC 19397 5394970 YP_001384378.1 CDS CLB_2063 NC_009697.1 2191967 2193109 R identified by match to protein family HMM PF00465; alcohol dehydrogenase complement(2191967..2193109) Clostridium botulinum A str. ATCC 19397 5396953 YP_001384379.1 CDS CLB_2064 NC_009697.1 2193622 2194923 D identified by match to protein family HMM PF01554; MATE efflux family protein 2193622..2194923 Clostridium botulinum A str. ATCC 19397 5395361 YP_001384380.1 CDS CLB_2065 NC_009697.1 2195069 2196016 D identified by Glimmer3; hypothetical protein 2195069..2196016 Clostridium botulinum A str. ATCC 19397 5395426 YP_001384381.1 CDS CLB_2066 NC_009697.1 2196134 2196640 R hypothetical protein complement(2196134..2196640) Clostridium botulinum A str. ATCC 19397 5398200 YP_001384382.1 CDS CLB_2067 NC_009697.1 2196668 2196799 R identified by Glimmer3; hypothetical protein complement(2196668..2196799) Clostridium botulinum A str. ATCC 19397 5395109 YP_001384383.1 CDS CLB_2068 NC_009697.1 2196784 2197572 R identified by match to protein family HMM PF09234; hypothetical protein complement(2196784..2197572) Clostridium botulinum A str. ATCC 19397 5395056 YP_001384384.1 CDS CLB_2069 NC_009697.1 2198377 2198739 R hypothetical protein complement(2198377..2198739) Clostridium botulinum A str. ATCC 19397 5397657 YP_001384385.1 CDS CLB_2070 NC_009697.1 2198752 2199240 R identified by match to protein family HMM PF00376; match to protein family HMM TIGR01764; excisionase family DNA-binding protein complement(2198752..2199240) Clostridium botulinum A str. ATCC 19397 5395376 YP_001384386.1 CDS CLB_2071 NC_009697.1 2199522 2200160 R identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076; sortase family protein complement(2199522..2200160) Clostridium botulinum A str. ATCC 19397 5396013 YP_001384387.1 CDS CLB_2072 NC_009697.1 2200129 2202822 R identified by Glimmer3; hypothetical protein complement(2200129..2202822) Clostridium botulinum A str. ATCC 19397 5394734 YP_001384388.1 CDS CLB_2073 NC_009697.1 2203139 2204158 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(2203139..2204158) Clostridium botulinum A str. ATCC 19397 5394703 YP_001384389.1 CDS CLB_2074 NC_009697.1 2204155 2204826 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(2204155..2204826) Clostridium botulinum A str. ATCC 19397 5396052 YP_001384390.1 CDS CLB_2075 NC_009697.1 2205024 2205734 R hypothetical protein complement(2205024..2205734) Clostridium botulinum A str. ATCC 19397 5397592 YP_001384391.1 CDS CLB_2076 NC_009697.1 2205727 2207883 R hypothetical protein complement(2205727..2207883) Clostridium botulinum A str. ATCC 19397 5394840 YP_001384392.1 CDS CLB_2077 NC_009697.1 2207955 2208830 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2207955..2208830) Clostridium botulinum A str. ATCC 19397 5396316 YP_001384393.1 CDS CLB_2078 NC_009697.1 2208890 2210884 R identified by match to protein family HMM PF02687; ABC transporter permease complement(2208890..2210884) Clostridium botulinum A str. ATCC 19397 5398213 YP_001384394.1 CDS CLB_2079 NC_009697.1 2211192 2212277 R FAD/NAD(P)-binding domain; oxidoreductase complement(2211192..2212277) Clostridium botulinum A str. ATCC 19397 5395837 YP_001384395.1 CDS CLB_2080 NC_009697.1 2212270 2212515 R hypothetical protein complement(2212270..2212515) Clostridium botulinum A str. ATCC 19397 5395420 YP_001384396.1 CDS CLB_2081 NC_009697.1 2212532 2213023 R hypothetical protein complement(2212532..2213023) Clostridium botulinum A str. ATCC 19397 5394951 YP_001384397.1 CDS CLB_2082 NC_009697.1 2213475 2214515 R identified by match to protein family HMM PF00107; match to protein family HMM PF08240; zinc-binding dehydrogenase family oxidoreductase complement(2213475..2214515) Clostridium botulinum A str. ATCC 19397 5395161 YP_001384398.1 CDS CLB_2083 NC_009697.1 2214582 2215439 R identified by match to protein family HMM PF01261; AP endonuclease complement(2214582..2215439) Clostridium botulinum A str. ATCC 19397 5396478 YP_001384399.1 CDS CLB_2084 NC_009697.1 2215523 2216662 R identified by match to protein family HMM PF01761; 3-dehydroquinate synthase complement(2215523..2216662) Clostridium botulinum A str. ATCC 19397 5395698 YP_001384400.1 CDS CLB_2085 NC_009697.1 2217228 2219222 R identified by match to protein family HMM PF02687; ABC transporter permease complement(2217228..2219222) Clostridium botulinum A str. ATCC 19397 5395159 YP_001384401.1 CDS CLB_2086 NC_009697.1 2219212 2219979 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2219212..2219979) Clostridium botulinum A str. ATCC 19397 5395407 YP_001384402.1 CDS CLB_2087 NC_009697.1 2220765 2221118 R hypothetical protein complement(2220765..2221118) Clostridium botulinum A str. ATCC 19397 5395427 YP_001384403.1 CDS CLB_2088 NC_009697.1 2221444 2223537 R identified by match to protein family HMM PF00359; match to protein family HMM PF00874; match to protein family HMM PF05043; match to protein family HMM PF08279; PRD domain-containing protein complement(2221444..2223537) Clostridium botulinum A str. ATCC 19397 5395143 YP_001384404.1 CDS ulaA NC_009697.1 2223749 2225113 R membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC complement(2223749..2225113) Clostridium botulinum A str. ATCC 19397 5395768 YP_001384405.1 CDS CLB_2090 NC_009697.1 2225126 2225410 R identified by match to protein family HMM PF02302; PTS system L-ascorbate family transporter subunit IIB complement(2225126..2225410) Clostridium botulinum A str. ATCC 19397 5396483 YP_001384406.1 CDS CLB_2091 NC_009697.1 2225439 2225876 R identified by match to protein family HMM PF00359; PTS system L-ascorbate family transporter subunit IIA complement(2225439..2225876) Clostridium botulinum A str. ATCC 19397 5394776 YP_001384407.1 CDS CLB_2092 NC_009697.1 2225900 2226616 R similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase complement(2225900..2226616) Clostridium botulinum A str. ATCC 19397 5395636 YP_001384408.1 CDS CLB_2093 NC_009697.1 2226851 2227255 R identified by Glimmer3; hypothetical protein complement(2226851..2227255) Clostridium botulinum A str. ATCC 19397 5395101 YP_001384409.1 CDS CLB_2094 NC_009697.1 2227593 2228327 R identified by Glimmer3; hypothetical protein complement(2227593..2228327) Clostridium botulinum A str. ATCC 19397 5397013 YP_001384410.1 CDS CLB_2095 NC_009697.1 2228667 2229260 R identified by match to protein family HMM PF02660; match to protein family HMM TIGR00023; membrane protein complement(2228667..2229260) Clostridium botulinum A str. ATCC 19397 5397136 YP_001384411.1 CDS CLB_2096 NC_009697.1 2230088 2230576 D lipoprotein 2230088..2230576 Clostridium botulinum A str. ATCC 19397 5394982 YP_001384412.1 CDS CLB_2097 NC_009697.1 2231359 2231853 R hypothetical protein complement(2231359..2231853) Clostridium botulinum A str. ATCC 19397 5397343 YP_001384413.1 CDS CLB_2098 NC_009697.1 2231896 2232510 R identified by match to protein family HMM PF00132; O-acetyltransferase family protein complement(2231896..2232510) Clostridium botulinum A str. ATCC 19397 5396946 YP_001384414.1 CDS CLB_2099 NC_009697.1 2232669 2232839 R identified by Glimmer3; hypothetical protein complement(2232669..2232839) Clostridium botulinum A str. ATCC 19397 5397797 YP_001384415.1 CDS CLB_2101 NC_009697.1 2233518 2234924 D identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924; amino acid/peptide transporter 2233518..2234924 Clostridium botulinum A str. ATCC 19397 5397539 YP_001384416.1 CDS CLB_2102 NC_009697.1 2235027 2235767 R identified by match to protein family HMM PF08242; hypothetical protein complement(2235027..2235767) Clostridium botulinum A str. ATCC 19397 5394727 YP_001384417.1 CDS CLB_2103 NC_009697.1 2235774 2236664 R identified by match to protein family HMM PF00165; match to protein family HMM PF06445; AraC family transcriptional regulator complement(2235774..2236664) Clostridium botulinum A str. ATCC 19397 5396636 YP_001384418.1 CDS CLB_2104 NC_009697.1 2236965 2237486 D hypothetical protein 2236965..2237486 Clostridium botulinum A str. ATCC 19397 5396479 YP_001384419.1 CDS enr NC_009697.1 2239450 2241447 R identified by match to protein family HMM PF00070; match to protein family HMM PF00724; match to protein family HMM PF07992; 2-enoate reductase complement(2239450..2241447) Clostridium botulinum A str. ATCC 19397 5398199 YP_001384420.1 CDS CLB_2106 NC_009697.1 2241544 2242341 R identified by match to protein family HMM PF00376; MerR family transcriptional regulator complement(2241544..2242341) Clostridium botulinum A str. ATCC 19397 5395909 YP_001384421.1 CDS CLB_2107 NC_009697.1 2242389 2242682 R identified by Glimmer3; hypothetical protein complement(2242389..2242682) Clostridium botulinum A str. ATCC 19397 5394771 YP_001384422.1 CDS CLB_2108 NC_009697.1 2242874 2243212 R identified by Glimmer3; hypothetical protein complement(2242874..2243212) Clostridium botulinum A str. ATCC 19397 5396033 YP_001384423.1 CDS CLB_2109 NC_009697.1 2243224 2244117 R identified by match to protein family HMM PF03787; match to protein family HMM TIGR01898; CRISPR-associated Cmr5 family protein complement(2243224..2244117) Clostridium botulinum A str. ATCC 19397 5396369 YP_001384424.1 CDS CLB_2110 NC_009697.1 2244129 2244563 R hypothetical protein complement(2244129..2244563) Clostridium botulinum A str. ATCC 19397 5397755 YP_001384425.1 CDS cmr4 NC_009697.1 2244591 2245430 R identified by match to protein family HMM PF03787; match to protein family HMM TIGR02580; CRISPR-associated RAMP Cmr4 family protein complement(2244591..2245430) Clostridium botulinum A str. ATCC 19397 5394541 YP_001384426.1 CDS cmr3 NC_009697.1 2245442 2246641 R CRISPR-associated Cmr3 family protein complement(2245442..2246641) Clostridium botulinum A str. ATCC 19397 5397763 YP_001384427.1 CDS crm2 NC_009697.1 2246658 2248370 R identified by match to protein family HMM TIGR02577; CRISPR-associated RAMP Crm2 family protein complement(2246658..2248370) Clostridium botulinum A str. ATCC 19397 5394882 YP_001384428.1 CDS CLB_2114 NC_009697.1 2248371 2249558 R identified by Glimmer3; hypothetical protein complement(2248371..2249558) Clostridium botulinum A str. ATCC 19397 5395131 YP_001384429.1 CDS CLB_2115 NC_009697.1 2249571 2251274 R identified by Glimmer3; hypothetical protein complement(2249571..2251274) Clostridium botulinum A str. ATCC 19397 5395747 YP_001384430.1 CDS CLB_2116 NC_009697.1 2251326 2251700 R identified by Glimmer3; hypothetical protein complement(2251326..2251700) Clostridium botulinum A str. ATCC 19397 5397500 YP_001384431.1 CDS cas6 NC_009697.1 2251720 2252409 R identified by match to protein family HMM TIGR01877; CRISPR-associated Cas family protein complement(2251720..2252409) Clostridium botulinum A str. ATCC 19397 5395317 YP_001384432.1 CDS CLB_2118 NC_009697.1 2254148 2255803 R hypothetical protein complement(2254148..2255803) Clostridium botulinum A str. ATCC 19397 5397568 YP_001384433.1 CDS CLB_2119 NC_009697.1 2255884 2255997 R identified by Glimmer3; hypothetical protein complement(2255884..2255997) Clostridium botulinum A str. ATCC 19397 5395731 YP_001384434.1 CDS CLB_2120 NC_009697.1 2256580 2257428 R identified by match to protein family HMM PF02567; match to protein family HMM TIGR00654; PhzF family phenazine biosynthesis protein complement(2256580..2257428) Clostridium botulinum A str. ATCC 19397 5397777 YP_001384435.1 CDS CLB_2121 NC_009697.1 2257719 2258639 R identified by match to protein family HMM PF02567; match to protein family HMM TIGR00654; PhzF family phenazine biosynthesis protein complement(2257719..2258639) Clostridium botulinum A str. ATCC 19397 5397791 YP_001384436.1 CDS CLB_2122 NC_009697.1 2258963 2260456 D identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator 2258963..2260456 Clostridium botulinum A str. ATCC 19397 5396517 YP_001384437.1 CDS CLB_2123 NC_009697.1 2261381 2261836 D hypothetical protein 2261381..2261836 Clostridium botulinum A str. ATCC 19397 5396601 YP_001384438.1 CDS CLB_2124 NC_009697.1 2261916 2262383 R identified by match to protein family HMM PF01381; DNA-binding protein complement(2261916..2262383) Clostridium botulinum A str. ATCC 19397 5397066 YP_001384439.1 CDS CLB_2125 NC_009697.1 2262551 2263582 R identified by match to protein family HMM PF07859; lipase/esterase complement(2262551..2263582) Clostridium botulinum A str. ATCC 19397 5396010 YP_001384440.1 CDS CLB_2126 NC_009697.1 2263848 2265200 R identified by match to protein family HMM PF01979; match to protein family HMM PF07969; amidohydrolase complement(2263848..2265200) Clostridium botulinum A str. ATCC 19397 5397295 YP_001384441.1 CDS CLB_2127 NC_009697.1 2265409 2266752 R identified by match to protein family HMM PF00860; match to protein family HMM TIGR03173; xanthine/uracil permease family protein complement(2265409..2266752) Clostridium botulinum A str. ATCC 19397 5396122 YP_001384442.1 CDS CLB_2128 NC_009697.1 2267320 2268087 D identified by Glimmer3; hypothetical protein 2267320..2268087 Clostridium botulinum A str. ATCC 19397 5395655 YP_001384443.1 CDS CLB_2129 NC_009697.1 2268428 2269747 D identified by match to protein family HMM PF00324; amino acid permease 2268428..2269747 Clostridium botulinum A str. ATCC 19397 5395275 YP_001384444.1 CDS hgdC-2 NC_009697.1 2270026 2270799 R identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; 2-hydroxyglutaryl-CoA dehydratase subunit A complement(2270026..2270799) Clostridium botulinum A str. ATCC 19397 5397030 YP_001384445.1 CDS CLB_2131 NC_009697.1 2270876 2272507 R hypothetical protein complement(2270876..2272507) Clostridium botulinum A str. ATCC 19397 5395867 YP_001384446.1 CDS CLB_2132 NC_009697.1 2272808 2273857 R identified by match to protein family HMM PF00766; match to protein family HMM PF01012; electron transfer flavoprotein subunit alpha/FixB family protein complement(2272808..2273857) Clostridium botulinum A str. ATCC 19397 5395402 YP_001384447.1 CDS CLB_2133 NC_009697.1 2273876 2274661 R identified by match to protein family HMM PF01012; electron transfer flavoprotein subunit beta/FixA family protein complement(2273876..2274661) Clostridium botulinum A str. ATCC 19397 5397116 YP_001384448.1 CDS CLB_2134 NC_009697.1 2274700 2275833 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(2274700..2275833) Clostridium botulinum A str. ATCC 19397 5397778 YP_001384449.1 CDS CLB_2135 NC_009697.1 2276098 2277225 R identified by match to protein family HMM PF06050; R-2-hydroxyglutaryl-CoA dehydratase subunit beta complement(2276098..2277225) Clostridium botulinum A str. ATCC 19397 5396487 YP_001384450.1 CDS CLB_2136 NC_009697.1 2277225 2278457 R identified by match to protein family HMM PF06050; R-2-hydroxyglutaryl-CoA dehydratase subunit alpha complement(2277225..2278457) Clostridium botulinum A str. ATCC 19397 5395190 YP_001384451.1 CDS CLB_2137 NC_009697.1 2278520 2279734 R identified by match to protein family HMM PF02515; hydroxyacyl-CoA:R-2-hydroxyglutaryl-CoA transferase complement(2278520..2279734) Clostridium botulinum A str. ATCC 19397 5395724 YP_001384452.1 CDS CLB_2138 NC_009697.1 2280478 2281299 R identified by match to protein family HMM PF00037; (Fe-S)-binding protein complement(2280478..2281299) Clostridium botulinum A str. ATCC 19397 5394957 YP_001384453.1 CDS CLB_2139 NC_009697.1 2281851 2283122 D identified by match to protein family HMM PF06050; R-2-hydroxyglutaryl-CoA dehydratase subunit 2281851..2283122 Clostridium botulinum A str. ATCC 19397 5398032 YP_001384454.1 CDS CLB_2140 NC_009697.1 2283125 2284819 D identified by match to protein family HMM PF01869; match to protein family HMM PF06050; match to protein family HMM TIGR00241; R-2-hydroxyglutaryl-CoA dehydratase subunit/ R-2-hydroxyglutaryl-CoA dehydratase activase 2283125..2284819 Clostridium botulinum A str. ATCC 19397 5394748 YP_001384455.1 CDS CLB_2141 NC_009697.1 2285118 2286269 R identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein complement(2285118..2286269) Clostridium botulinum A str. ATCC 19397 5397128 YP_001384456.1 CDS CLB_2142 NC_009697.1 2286326 2286439 R identified by Glimmer3; hypothetical protein complement(2286326..2286439) Clostridium botulinum A str. ATCC 19397 5394809 YP_001384457.1 CDS CLB_2143 NC_009697.1 2286870 2287469 R hypothetical protein complement(2286870..2287469) Clostridium botulinum A str. ATCC 19397 5396020 YP_001384458.1 CDS CLB_2144 NC_009697.1 2287883 2288476 R identified by match to protein family HMM PF00583; acetyltransferase complement(2287883..2288476) Clostridium botulinum A str. ATCC 19397 5395894 YP_001384459.1 CDS gntP NC_009697.1 2289401 2290789 R identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM TIGR00791; gluconate permease complement(2289401..2290789) Clostridium botulinum A str. ATCC 19397 5398214 YP_001384460.1 CDS pdxA NC_009697.1 2291016 2292020 R catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase complement(2291016..2292020) Clostridium botulinum A str. ATCC 19397 5395532 YP_001384461.1 CDS CLB_2148 NC_009697.1 2292033 2293370 R hypothetical protein complement(2292033..2293370) Clostridium botulinum A str. ATCC 19397 5397115 YP_001384462.1 CDS CLB_2149 NC_009697.1 2293435 2294193 R identified by match to protein family HMM PF00455; match to protein family HMM PF08220; match to protein family HMM PF08279; DeoR family transcriptional regulator complement(2293435..2294193) Clostridium botulinum A str. ATCC 19397 5395666 YP_001384463.1 CDS CLB_2150 NC_009697.1 2294770 2295663 R identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein complement(2294770..2295663) Clostridium botulinum A str. ATCC 19397 5396183 YP_001384464.1 CDS CLB_2151 NC_009697.1 2296078 2297463 D identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 2296078..2297463 Clostridium botulinum A str. ATCC 19397 5394816 YP_001384465.1 CDS CLB_2152 NC_009697.1 2297908 2298501 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(2297908..2298501) Clostridium botulinum A str. ATCC 19397 5397949 YP_001384466.1 CDS CLB_2153 NC_009697.1 2298645 2299172 D hypothetical protein 2298645..2299172 Clostridium botulinum A str. ATCC 19397 5395613 YP_001384467.1 CDS CLB_2154 NC_009697.1 2299314 2299964 D hypothetical protein 2299314..2299964 Clostridium botulinum A str. ATCC 19397 5397998 YP_001384468.1 CDS CLB_2155 NC_009697.1 2300230 2302692 D hypothetical protein 2300230..2302692 Clostridium botulinum A str. ATCC 19397 5396743 YP_001384469.1 CDS CLB_2156 NC_009697.1 2302763 2303836 R identified by match to protein family HMM PF00107; match to protein family HMM PF08240; zinc-binding dehydrogenase family oxidoreductase complement(2302763..2303836) Clostridium botulinum A str. ATCC 19397 5398066 YP_001384470.1 CDS CLB_2157 NC_009697.1 2304285 2306249 R identified by match to protein family HMM PF03063; match to protein family HMM TIGR01702; carbon monoxide dehydrogenase complement(2304285..2306249) Clostridium botulinum A str. ATCC 19397 5395424 YP_001384471.1 CDS hypA-2 NC_009697.1 2306904 2307245 D identified by match to protein family HMM PF01155; hydrogenase nickel incorporation protein HypA 2306904..2307245 Clostridium botulinum A str. ATCC 19397 5397899 YP_001384472.1 CDS hypB-2 NC_009697.1 2307248 2307886 D identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073; hydrogenase nickel incorporation protein HypB 2307248..2307886 Clostridium botulinum A str. ATCC 19397 5395756 YP_001384473.1 CDS CLB_2160 NC_009697.1 2307909 2308265 R identified by match to protein family HMM PF02579; dinitrogenase iron-molybdenum cofactor family protein complement(2307909..2308265) Clostridium botulinum A str. ATCC 19397 5394630 YP_001384474.1 CDS CLB_2161 NC_009697.1 2308361 2309206 R identified by match to protein family HMM PF00037; match to protein family HMM PF01656; iron-sulfur binding protein complement(2308361..2309206) Clostridium botulinum A str. ATCC 19397 5395043 YP_001384475.1 CDS CLB_2162 NC_009697.1 2309197 2310027 R identified by match to protein family HMM PF00037; match to protein family HMM PF01656; iron-sulfur binding protein complement(2309197..2310027) Clostridium botulinum A str. ATCC 19397 5398036 YP_001384476.1 CDS CLB_2163 NC_009697.1 2310052 2310411 R identified by match to protein family HMM PF02579; dinitrogenase iron-molybdenum cofactor family protein complement(2310052..2310411) Clostridium botulinum A str. ATCC 19397 5395355 YP_001384477.1 CDS CLB_2164 NC_009697.1 2311000 2311377 R identified by Glimmer3; hypothetical protein complement(2311000..2311377) Clostridium botulinum A str. ATCC 19397 5397948 YP_001384478.1 CDS motB-1 NC_009697.1 2311673 2312437 R identified by match to protein family HMM PF00691; chemotaxis MotB protein complement(2311673..2312437) Clostridium botulinum A str. ATCC 19397 5395503 YP_001384479.1 CDS motA-1 NC_009697.1 2312455 2313240 R With Mot B forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.; flagellar motor protein MotA complement(2312455..2313240) Clostridium botulinum A str. ATCC 19397 5396082 YP_001384480.1 CDS CLB_2167 NC_009697.1 2313269 2313412 D identified by Glimmer3; hypothetical protein 2313269..2313412 Clostridium botulinum A str. ATCC 19397 5394986 YP_001384481.1 CDS CLB_2168 NC_009697.1 2313929 2315545 R identified by match to protein family HMM PF04122; amidase complement(2313929..2315545) Clostridium botulinum A str. ATCC 19397 5395156 YP_001384482.1 CDS CLB_2169 NC_009697.1 2315856 2316479 R hypothetical protein complement(2315856..2316479) Clostridium botulinum A str. ATCC 19397 5395374 YP_001384483.1 CDS CLB_2170 NC_009697.1 2316759 2317100 R hypothetical protein complement(2316759..2317100) Clostridium botulinum A str. ATCC 19397 5396881 YP_001384484.1 CDS CLB_2171 NC_009697.1 2317106 2319061 R identified by match to protein family HMM PF03169; match to protein family HMM TIGR00728; match to protein family HMM TIGR00733; OPT family oligopeptide transporter complement(2317106..2319061) Clostridium botulinum A str. ATCC 19397 5396598 YP_001384485.1 CDS pepD-2 NC_009697.1 2319179 2320627 R identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893; aminoacyl-histidine dipeptidase complement(2319179..2320627) Clostridium botulinum A str. ATCC 19397 5394834 YP_001384486.1 CDS CLB_2173 NC_009697.1 2321185 2322213 R identified by match to protein family HMM PF01212; low specificity L-threonine aldolase complement(2321185..2322213) Clostridium botulinum A str. ATCC 19397 5396735 YP_001384487.1 CDS CLB_2175 NC_009697.1 2322920 2323054 D identified by Glimmer3; hypothetical protein 2322920..2323054 Clostridium botulinum A str. ATCC 19397 5396704 YP_001384488.1 CDS glxK NC_009697.1 2323051 2324193 R identified by match to protein family HMM PF02595; match to protein family HMM TIGR00045; glycerate kinase complement(2323051..2324193) Clostridium botulinum A str. ATCC 19397 5394757 YP_001384489.1 CDS CLB_2176 NC_009697.1 2324832 2325629 D identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase family oxidoreductase 2324832..2325629 Clostridium botulinum A str. ATCC 19397 5398212 YP_001384490.1 CDS CLB_2177 NC_009697.1 2326151 2327329 R sodium extrusion protein NatB complement(2326151..2327329) Clostridium botulinum A str. ATCC 19397 5394654 YP_001384491.1 CDS CLB_2178 NC_009697.1 2327343 2328062 R identified by match to protein family HMM PF00005; sodium extrusion ATP-binding protein NatA complement(2327343..2328062) Clostridium botulinum A str. ATCC 19397 5396512 YP_001384492.1 CDS CLB_2179 NC_009697.1 2328518 2328967 R identified by match to protein family HMM PF00583; acetyltransferase complement(2328518..2328967) Clostridium botulinum A str. ATCC 19397 5397863 YP_001384493.1 CDS CLB_2180 NC_009697.1 2328981 2329445 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(2328981..2329445) Clostridium botulinum A str. ATCC 19397 5395010 YP_001384494.1 CDS CLB_2181 NC_009697.1 2329796 2329930 D identified by Glimmer3; hypothetical protein 2329796..2329930 Clostridium botulinum A str. ATCC 19397 5397317 YP_001384495.1 CDS CLB_2182 NC_009697.1 2330138 2330542 R hypothetical protein complement(2330138..2330542) Clostridium botulinum A str. ATCC 19397 5396766 YP_001384496.1 CDS CLB_2183 NC_009697.1 2330638 2331708 R identified by match to protein family HMM PF01208; uroporphyrinogen decarboxylase complement(2330638..2331708) Clostridium botulinum A str. ATCC 19397 5396796 YP_001384497.1 CDS CLB_2184 NC_009697.1 2332056 2333504 R identified by match to protein family HMM PF01266; match to protein family HMM PF04324; oxidoreductase, FAD/[2Fe-2S]-binding complement(2332056..2333504) Clostridium botulinum A str. ATCC 19397 5396993 YP_001384498.1 CDS CLB_2185 NC_009697.1 2333852 2334670 D identified by match to protein family HMM PF00376; match to protein family HMM PF06445; MerR family transcriptional regulator 2333852..2334670 Clostridium botulinum A str. ATCC 19397 5396906 YP_001384499.1 CDS CLB_2186 NC_009697.1 2334878 2336281 R identified by match to protein family HMM PF00324; amino acid permease complement(2334878..2336281) Clostridium botulinum A str. ATCC 19397 5397024 YP_001384500.1 CDS CLB_2187 NC_009697.1 2336719 2337261 R identified by match to protein family HMM PF01661; hypothetical protein complement(2336719..2337261) Clostridium botulinum A str. ATCC 19397 5397289 YP_001384501.1 CDS CLB_2188 NC_009697.1 2337643 2337900 R identified by match to protein family HMM PF06961; hypothetical protein complement(2337643..2337900) Clostridium botulinum A str. ATCC 19397 5395185 YP_001384502.1 CDS CLB_2189 NC_009697.1 2338260 2338385 D identified by Glimmer3; hypothetical protein 2338260..2338385 Clostridium botulinum A str. ATCC 19397 5396442 YP_001384503.1 CDS CLB_2190 NC_009697.1 2338404 2338835 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 2338404..2338835 Clostridium botulinum A str. ATCC 19397 5397075 YP_001384504.1 CDS CLB_2191 NC_009697.1 2338838 2339230 D hypothetical protein 2338838..2339230 Clostridium botulinum A str. ATCC 19397 5397436 YP_001384505.1 CDS CLB_2192 NC_009697.1 2339488 2339676 R ATP-binding protein complement(2339488..2339676) Clostridium botulinum A str. ATCC 19397 5395488 YP_001384506.1 CDS thiM-2 NC_009697.1 2339896 2340693 R identified by match to protein family HMM PF02110; hydroxyethylthiazole kinase complement(2339896..2340693) Clostridium botulinum A str. ATCC 19397 5395818 YP_001384507.1 CDS thiW NC_009697.1 2340671 2341240 R identified by match to protein family HMM TIGR02359; thiW protein complement(2340671..2341240) Clostridium botulinum A str. ATCC 19397 5397323 YP_001384508.1 CDS CLB_2195 NC_009697.1 2341419 2341520 R identified by Glimmer3; hypothetical protein complement(2341419..2341520) Clostridium botulinum A str. ATCC 19397 5395870 YP_001384509.1 CDS CLB_2196 NC_009697.1 2341683 2342120 R identified by match to protein family HMM PF00583; acetyltransferase complement(2341683..2342120) Clostridium botulinum A str. ATCC 19397 5397753 YP_001384510.1 CDS CLB_2197 NC_009697.1 2342248 2342976 R identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein complement(2342248..2342976) Clostridium botulinum A str. ATCC 19397 5394997 YP_001384511.1 CDS CLB_2198 NC_009697.1 2343161 2343433 R hypothetical protein complement(2343161..2343433) Clostridium botulinum A str. ATCC 19397 5396014 YP_001384512.1 CDS bioD NC_009697.1 2343718 2344401 R DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase complement(2343718..2344401) Clostridium botulinum A str. ATCC 19397 5395801 YP_001384513.1 CDS bioB NC_009697.1 2344404 2345360 R identified by match to protein family HMM PF04055; match to protein family HMM PF06968; match to protein family HMM TIGR00433; biotin synthase complement(2344404..2345360) Clostridium botulinum A str. ATCC 19397 5397839 YP_001384514.1 CDS CLB_2201 NC_009697.1 2345353 2345913 R identified by match to protein family HMM PF02632; BioY family protein complement(2345353..2345913) Clostridium botulinum A str. ATCC 19397 5395610 YP_001384515.1 CDS CLB_2202 NC_009697.1 2346052 2346381 R hypothetical protein complement(2346052..2346381) Clostridium botulinum A str. ATCC 19397 5395251 YP_001384516.1 CDS CLB_2203 NC_009697.1 2346369 2346797 R identified by match to protein family HMM PF01022; match to protein family HMM PF01047; MarR family transcriptional regulator complement(2346369..2346797) Clostridium botulinum A str. ATCC 19397 5394662 YP_001384517.1 CDS CLB_2204 NC_009697.1 2346939 2347535 R hypothetical protein complement(2346939..2347535) Clostridium botulinum A str. ATCC 19397 5396614 YP_001384518.1 CDS CLB_2205 NC_009697.1 2347713 2349506 D identified by match to protein family HMM PF00557; match to protein family HMM PF01321; M24 family metallopeptidase 2347713..2349506 Clostridium botulinum A str. ATCC 19397 5397272 YP_001384519.1 CDS CLB_2206 NC_009697.1 2349537 2350934 D identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924; amino acid/peptide transporter 2349537..2350934 Clostridium botulinum A str. ATCC 19397 5396922 YP_001384520.1 CDS CLB_2207 NC_009697.1 2351474 2351722 R identified by Glimmer3; hypothetical protein complement(2351474..2351722) Clostridium botulinum A str. ATCC 19397 5396315 YP_001384521.1 CDS CLB_2208 NC_009697.1 2351986 2352255 R hypothetical protein complement(2351986..2352255) Clostridium botulinum A str. ATCC 19397 5396706 YP_001384522.1 CDS CLB_2209 NC_009697.1 2352523 2352855 D identified by Glimmer3; hypothetical protein 2352523..2352855 Clostridium botulinum A str. ATCC 19397 5395760 YP_001384523.1 CDS CLB_2210 NC_009697.1 2353020 2354021 R identified by match to protein family HMM PF02275; match to protein family HMM PF03417; choloylglycine hydrolase family protein complement(2353020..2354021) Clostridium botulinum A str. ATCC 19397 5394571 YP_001384524.1 CDS CLB_2211 NC_009697.1 2354219 2354800 R identified by match to protein family HMM PF02525; match to protein family HMM PF03358; hypothetical protein complement(2354219..2354800) Clostridium botulinum A str. ATCC 19397 5395569 YP_001384525.1 CDS CLB_2212 NC_009697.1 2355255 2355596 R identified by Glimmer3; hypothetical protein complement(2355255..2355596) Clostridium botulinum A str. ATCC 19397 5396920 YP_001384526.1 CDS CLB_2215 NC_009697.1 2355915 2356118 R identified by Glimmer3; hypothetical protein complement(2355915..2356118) Clostridium botulinum A str. ATCC 19397 5396200 YP_001384527.1 CDS CLB_2216 NC_009697.1 2356932 2357264 D identified by Glimmer3; hypothetical protein 2356932..2357264 Clostridium botulinum A str. ATCC 19397 5394536 YP_001384528.1 CDS CLB_2217 NC_009697.1 2357706 2358689 D hypothetical protein 2357706..2358689 Clostridium botulinum A str. ATCC 19397 5395289 YP_001384529.1 CDS CLB_2218 NC_009697.1 2358784 2358951 R identified by similarity to GB:BAE81899.1; hypothetical protein complement(2358784..2358951) Clostridium botulinum A str. ATCC 19397 5394789 YP_001384530.1 CDS CLB_2219 NC_009697.1 2359803 2360396 R lipoprotein complement(2359803..2360396) Clostridium botulinum A str. ATCC 19397 5394828 YP_001384531.1 CDS msrB NC_009697.1 2360570 2361019 R this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B complement(2360570..2361019) Clostridium botulinum A str. ATCC 19397 5397377 YP_001384532.1 CDS sodF NC_009697.1 2361251 2361847 R identified by match to protein family HMM PF00081; match to protein family HMM PF02777; Mn/Fe superoxide dismutase complement(2361251..2361847) Clostridium botulinum A str. ATCC 19397 5398081 YP_001384533.1 CDS CLB_2222 NC_009697.1 2361960 2363705 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein/permease complement(2361960..2363705) Clostridium botulinum A str. ATCC 19397 5396795 YP_001384534.1 CDS CLB_2223 NC_009697.1 2363698 2365497 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease complement(2363698..2365497) Clostridium botulinum A str. ATCC 19397 5396414 YP_001384535.1 CDS CLB_2224 NC_009697.1 2365777 2366736 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(2365777..2366736) Clostridium botulinum A str. ATCC 19397 5396610 YP_001384536.1 CDS CLB_2225 NC_009697.1 2367243 2367977 R hypothetical protein complement(2367243..2367977) Clostridium botulinum A str. ATCC 19397 5396740 YP_001384537.1 CDS CLB_2226 NC_009697.1 2368013 2368759 R hypothetical protein complement(2368013..2368759) Clostridium botulinum A str. ATCC 19397 5397572 YP_001384538.1 CDS CLB_2227 NC_009697.1 2368752 2369672 R identified by match to protein family HMM PF00005; antibiotic ABC transporter ATP-binding protein complement(2368752..2369672) Clostridium botulinum A str. ATCC 19397 5394597 YP_001384539.1 CDS CLB_2228 NC_009697.1 2369874 2370785 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(2369874..2370785) Clostridium botulinum A str. ATCC 19397 5397266 YP_001384540.1 CDS CLB_2229 NC_009697.1 2370782 2371489 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(2370782..2371489) Clostridium botulinum A str. ATCC 19397 5395905 YP_001384541.1 CDS CLB_2230 NC_009697.1 2371670 2371795 D identified by Glimmer3; hypothetical protein 2371670..2371795 Clostridium botulinum A str. ATCC 19397 5395935 YP_001384542.1 CDS CLB_2231 NC_009697.1 2372116 2372877 D identified by match to protein family HMM PF00929; exonuclease family protein 2372116..2372877 Clostridium botulinum A str. ATCC 19397 5395194 YP_001384543.1 CDS CLB_2232 NC_009697.1 2372911 2373213 R identified by match to protein family HMM PF07876; stress responsive alpha-beta barrel domain-containing protein complement(2372911..2373213) Clostridium botulinum A str. ATCC 19397 5394573 YP_001384544.1 CDS CLB_2233 NC_009697.1 2373296 2374132 R identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein complement(2373296..2374132) Clostridium botulinum A str. ATCC 19397 5396208 YP_001384545.1 CDS def-1 NC_009697.1 2374435 2374887 R identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079; peptide deformylase complement(2374435..2374887) Clostridium botulinum A str. ATCC 19397 5395403 YP_001384546.1 CDS CLB_2235 NC_009697.1 2374888 2375124 R identified by match to protein family HMM PF01381; DNA-binding protein complement(2374888..2375124) Clostridium botulinum A str. ATCC 19397 5397589 YP_001384547.1 CDS tgl NC_009697.1 2375366 2376187 R involved in assembly of spore coat proteins such as GerQ by catalyzing epsilon-(gamma-glutamyl)lysine cross links; transglutaminase complement(2375366..2376187) Clostridium botulinum A str. ATCC 19397 5395453 YP_001384548.1 CDS CLB_2237 NC_009697.1 2376184 2377179 R identified by Glimmer3; hypothetical protein complement(2376184..2377179) Clostridium botulinum A str. ATCC 19397 5397789 YP_001384549.1 CDS CLB_2238 NC_009697.1 2377919 2378818 D identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase family oxidoreductase 2377919..2378818 Clostridium botulinum A str. ATCC 19397 5397526 YP_001384550.1 CDS CLB_2239 NC_009697.1 2379008 2379604 R hypothetical protein complement(2379008..2379604) Clostridium botulinum A str. ATCC 19397 5398223 YP_001384551.1 CDS CLB_2240 NC_009697.1 2380280 2381653 D identified by match to protein family HMM PF02366; hypothetical protein 2380280..2381653 Clostridium botulinum A str. ATCC 19397 5395697 YP_001384552.1 CDS CLB_2241 NC_009697.1 2381855 2382160 R hypothetical protein complement(2381855..2382160) Clostridium botulinum A str. ATCC 19397 5394833 YP_001384553.1 CDS CLB_2242 NC_009697.1 2382153 2382677 R hypothetical protein complement(2382153..2382677) Clostridium botulinum A str. ATCC 19397 5397802 YP_001384554.1 CDS CLB_2243 NC_009697.1 2382658 2383110 R identified by Glimmer3; hypothetical protein complement(2382658..2383110) Clostridium botulinum A str. ATCC 19397 5395093 YP_001384555.1 CDS CLB_2244 NC_009697.1 2383107 2383619 R identified by match to protein family HMM PF04542; match to protein family HMM TIGR02937; ECF subfamily RNA polymerase sigma factor complement(2383107..2383619) Clostridium botulinum A str. ATCC 19397 5395481 YP_001384556.1 CDS CLB_2245 NC_009697.1 2384073 2385179 R identified by match to protein family HMM PF03845; match to protein family HMM TIGR00912; spore germination protein complement(2384073..2385179) Clostridium botulinum A str. ATCC 19397 5396570 YP_001384557.1 CDS CLB_2246 NC_009697.1 2385825 2386223 R hypothetical protein complement(2385825..2386223) Clostridium botulinum A str. ATCC 19397 5398071 YP_001384558.1 CDS CLB_2247 NC_009697.1 2386494 2387846 R identified by match to protein family HMM PF01743; match to protein family HMM PF01966; match to protein family HMM TIGR00277; poly(A) polymerase complement(2386494..2387846) Clostridium botulinum A str. ATCC 19397 5396159 YP_001384559.1 CDS CLB_2248 NC_009697.1 2387836 2388084 R identified by Glimmer3; hypothetical protein complement(2387836..2388084) Clostridium botulinum A str. ATCC 19397 5395784 YP_001384560.1 CDS CLB_2249 NC_009697.1 2388261 2388425 R identified by Glimmer3; hypothetical protein complement(2388261..2388425) Clostridium botulinum A str. ATCC 19397 5396860 YP_001384561.1 CDS CLB_2250 NC_009697.1 2389028 2389360 D identified by match to protein family HMM PF03551; PadR family transcriptional regulator 2389028..2389360 Clostridium botulinum A str. ATCC 19397 5398091 YP_001384562.1 CDS CLB_2251 NC_009697.1 2389434 2390138 D hypothetical protein 2389434..2390138 Clostridium botulinum A str. ATCC 19397 5397466 YP_001384563.1 CDS CLB_2252 NC_009697.1 2390212 2391462 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(2390212..2391462) Clostridium botulinum A str. ATCC 19397 5397934 YP_001384564.1 CDS CLB_2253 NC_009697.1 2391455 2392135 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(2391455..2392135) Clostridium botulinum A str. ATCC 19397 5397445 YP_001384565.1 CDS CLB_2254 NC_009697.1 2392128 2392667 R identified by match to protein family HMM PF00627; UBA/TS-N domain-containing protein complement(2392128..2392667) Clostridium botulinum A str. ATCC 19397 5397173 YP_001384566.1 CDS CLB_2255 NC_009697.1 2392817 2393359 R identified by Glimmer3; hypothetical protein complement(2392817..2393359) Clostridium botulinum A str. ATCC 19397 5396628 YP_001384567.1 CDS CLB_2256 NC_009697.1 2393717 2394526 R hypothetical protein complement(2393717..2394526) Clostridium botulinum A str. ATCC 19397 5394651 YP_001384568.1 CDS CLB_2257 NC_009697.1 2394402 2394560 R identified by Glimmer3; hypothetical protein complement(2394402..2394560) Clostridium botulinum A str. ATCC 19397 5396227 YP_001384569.1 CDS gidA-1 NC_009697.1 2394826 2396103 D identified by match to protein family HMM PF01134; match to protein family HMM PF01266; match to protein family HMM PF03486; match to protein family HMM PF07992; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 2394826..2396103 Clostridium botulinum A str. ATCC 19397 5394705 YP_001384570.1 CDS purB NC_009697.1 2396154 2397584 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(2396154..2397584) Clostridium botulinum A str. ATCC 19397 5396289 YP_001384571.1 CDS CLB_2260 NC_009697.1 2397836 2398057 D identified by match to protein family HMM PF04070; hypothetical protein 2397836..2398057 Clostridium botulinum A str. ATCC 19397 5395336 YP_001384572.1 CDS ptsH NC_009697.1 2398085 2398342 R identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003; phosphocarrier protein HPr complement(2398085..2398342) Clostridium botulinum A str. ATCC 19397 5396026 YP_001384573.1 CDS aspB-3 NC_009697.1 2398453 2399646 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(2398453..2399646) Clostridium botulinum A str. ATCC 19397 5397843 YP_001384574.1 CDS CLB_2263 NC_009697.1 2399791 2400147 R identified by match to protein family HMM PF00892; match to protein family HMM PF00893; hypothetical protein complement(2399791..2400147) Clostridium botulinum A str. ATCC 19397 5396344 YP_001384575.1 CDS CLB_2264 NC_009697.1 2400144 2401427 R hypothetical protein complement(2400144..2401427) Clostridium botulinum A str. ATCC 19397 5394787 YP_001384576.1 CDS CLB_2265 NC_009697.1 2401446 2402312 R catalyzes the formation of decaprenylphosphoryl-5-phosphoribose from phosphoribose diphosphate and decaprenyl phosphate; phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase complement(2401446..2402312) Clostridium botulinum A str. ATCC 19397 5395674 YP_001384577.1 CDS spoVS NC_009697.1 2402475 2402735 R identified by match to protein family HMM PF04232; stage V sporulation protein S complement(2402475..2402735) Clostridium botulinum A str. ATCC 19397 5394906 YP_001384578.1 CDS CLB_2267 NC_009697.1 2402874 2404415 R protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase complement(2402874..2404415) Clostridium botulinum A str. ATCC 19397 5396696 YP_001384579.1 CDS recA NC_009697.1 2404650 2405708 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(2404650..2405708) Clostridium botulinum A str. ATCC 19397 5394622 YP_001384580.1 CDS pgsA NC_009697.1 2405856 2406440 R identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(2405856..2406440) Clostridium botulinum A str. ATCC 19397 5396191 YP_001384581.1 CDS CLB_2270 NC_009697.1 2406424 2407761 R identified by match to protein family HMM PF00919; match to protein family HMM PF01938; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01125; RNA modification protein complement(2406424..2407761) Clostridium botulinum A str. ATCC 19397 5395775 YP_001384582.1 CDS ftsK NC_009697.1 2407856 2410132 R identified by match to protein family HMM PF01580; DNA translocase FtsK/SpoIIIE complement(2407856..2410132) Clostridium botulinum A str. ATCC 19397 5397511 YP_001384583.1 CDS clpP-1 NC_009697.1 2410613 2411305 R identified by match to protein family HMM PF00574; Clp protease complement(2410613..2411305) Clostridium botulinum A str. ATCC 19397 5396577 YP_001384584.1 CDS dapG NC_009697.1 2411553 2412758 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; diaminopimelate sensitive; aspartate kinase complement(2411553..2412758) Clostridium botulinum A str. ATCC 19397 5397239 YP_001384585.1 CDS CLB_2274 NC_009697.1 2412774 2413046 R identified by match to protein family HMM PF05239; match to protein family HMM TIGR02888; PRC-barrel domain-containing protein complement(2412774..2413046) Clostridium botulinum A str. ATCC 19397 5394867 YP_001384586.1 CDS CLB_2275 NC_009697.1 2413123 2414424 R identified by match to protein family HMM PF00675; match to protein family HMM PF05193; M16 family peptidase complement(2413123..2414424) Clostridium botulinum A str. ATCC 19397 5398073 YP_001384587.1 CDS pnpA NC_009697.1 2414599 2416707 R identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; polynucleotide phosphorylase complement(2414599..2416707) Clostridium botulinum A str. ATCC 19397 5397699 YP_001384588.1 CDS rpsO NC_009697.1 2416971 2417285 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(2416971..2417285) Clostridium botulinum A str. ATCC 19397 5395112 YP_001384589.1 CDS ribF NC_009697.1 2417367 2418287 R catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase complement(2417367..2418287) Clostridium botulinum A str. ATCC 19397 5395208 YP_001384590.1 CDS truB NC_009697.1 2418300 2419169 R catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B complement(2418300..2419169) Clostridium botulinum A str. ATCC 19397 5397121 YP_001384591.1 CDS CLB_2280 NC_009697.1 2419170 2420132 R identified by match to protein family HMM PF01368; match to protein family HMM PF02272; DHH family protein complement(2419170..2420132) Clostridium botulinum A str. ATCC 19397 5396657 YP_001384592.1 CDS rbfA NC_009697.1 2420122 2420484 R associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A complement(2420122..2420484) Clostridium botulinum A str. ATCC 19397 5397108 YP_001384593.1 CDS infB NC_009697.1 2420515 2422581 R Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 complement(2420515..2422581) Clostridium botulinum A str. ATCC 19397 5397773 YP_001384594.1 CDS CLB_2283 NC_009697.1 2422599 2422916 R identified by match to protein family HMM PF01248; ribosomal protein L7Ae family protein complement(2422599..2422916) Clostridium botulinum A str. ATCC 19397 5397803 YP_001384595.1 CDS CLB_2284 NC_009697.1 2422903 2423175 R identified by match to protein family HMM PF04296; hypothetical protein complement(2422903..2423175) Clostridium botulinum A str. ATCC 19397 5395772 YP_001384596.1 CDS nusA NC_009697.1 2423235 2424608 R modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA complement(2423235..2424608) Clostridium botulinum A str. ATCC 19397 5396527 YP_001384597.1 CDS CLB_2286 NC_009697.1 2424625 2425086 R in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein complement(2424625..2425086) Clostridium botulinum A str. ATCC 19397 5396257 YP_001384598.1 CDS polC NC_009697.1 2425391 2429689 R catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity; DNA polymerase III PolC complement(2425391..2429689) Clostridium botulinum A str. ATCC 19397 5396163 YP_001384599.1 CDS ispG NC_009697.1 2429968 2431017 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(2429968..2431017) Clostridium botulinum A str. ATCC 19397 5397305 YP_001384600.1 CDS CLB_2289 NC_009697.1 2431158 2432168 R identified by match to protein family HMM PF02163; match to protein family HMM TIGR00054; membrane-associated zinc metalloprotease complement(2431158..2432168) Clostridium botulinum A str. ATCC 19397 5395445 YP_001384601.1 CDS dxr NC_009697.1 2432213 2433370 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(2432213..2433370) Clostridium botulinum A str. ATCC 19397 5397938 YP_001384602.1 CDS CLB_2291 NC_009697.1 2433407 2434387 R identified by match to protein family HMM PF01594; hypothetical protein complement(2433407..2434387) Clostridium botulinum A str. ATCC 19397 5396716 YP_001384603.1 CDS CLB_2292 NC_009697.1 2434487 2434609 R identified by Glimmer3; hypothetical protein complement(2434487..2434609) Clostridium botulinum A str. ATCC 19397 5395501 YP_001384604.1 CDS CLB_2293 NC_009697.1 2434668 2434856 R identified by Glimmer3; hypothetical protein complement(2434668..2434856) Clostridium botulinum A str. ATCC 19397 5394615 YP_001384605.1 CDS cdsA NC_009697.1 2435042 2435839 R identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase complement(2435042..2435839) Clostridium botulinum A str. ATCC 19397 5397329 YP_001384606.1 CDS uppS NC_009697.1 2435864 2436622 R catalyzes the formation of UDP pyrophosphate from isopentenyl pyrophosphate; UDP pyrophosphate synthase complement(2435864..2436622) Clostridium botulinum A str. ATCC 19397 5394835 YP_001384607.1 CDS frr NC_009697.1 2436688 2437242 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(2436688..2437242) Clostridium botulinum A str. ATCC 19397 5394554 YP_001384608.1 CDS pyrH NC_009697.1 2437258 2437974 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(2437258..2437974) Clostridium botulinum A str. ATCC 19397 5395276 YP_001384609.1 CDS tsf NC_009697.1 2438349 2439272 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(2438349..2439272) Clostridium botulinum A str. ATCC 19397 5397652 YP_001384610.1 CDS rpsB NC_009697.1 2439360 2440061 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(2439360..2440061) Clostridium botulinum A str. ATCC 19397 5398117 YP_001384611.1 CDS codY NC_009697.1 2440298 2441074 R CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; transcriptional repressor CodY complement(2440298..2441074) Clostridium botulinum A str. ATCC 19397 5395954 YP_001384612.1 CDS topA NC_009697.1 2441281 2443383 R catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I complement(2441281..2443383) Clostridium botulinum A str. ATCC 19397 5394592 YP_001384613.1 CDS dprA NC_009697.1 2443755 2444840 R identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732; DNA protecting protein DprA complement(2443755..2444840) Clostridium botulinum A str. ATCC 19397 5396893 YP_001384614.1 CDS CLB_2303 NC_009697.1 2445040 2446563 D identified by match to protein family HMM PF01078; match to protein family HMM TIGR00368; Mg chelatase-like protein 2445040..2446563 Clostridium botulinum A str. ATCC 19397 5395643 YP_001384615.1 CDS CLB_2304 NC_009697.1 2446579 2446950 D identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; hypothetical protein 2446579..2446950 Clostridium botulinum A str. ATCC 19397 5397919 YP_001384616.1 CDS rnhB NC_009697.1 2447033 2447842 R RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII complement(2447033..2447842) Clostridium botulinum A str. ATCC 19397 5398002 YP_001384617.1 CDS rbgA NC_009697.1 2448139 2449017 R essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase complement(2448139..2449017) Clostridium botulinum A str. ATCC 19397 5397417 YP_001384618.1 CDS lepB-2 NC_009697.1 2449321 2449845 R identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I complement(2449321..2449845) Clostridium botulinum A str. ATCC 19397 5395075 YP_001384619.1 CDS rplS NC_009697.1 2449904 2450248 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(2449904..2450248) Clostridium botulinum A str. ATCC 19397 5395002 YP_001384620.1 CDS trmD NC_009697.1 2450399 2451121 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(2450399..2451121) Clostridium botulinum A str. ATCC 19397 5397219 YP_001384621.1 CDS rimM NC_009697.1 2451112 2451606 R Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM complement(2451112..2451606) Clostridium botulinum A str. ATCC 19397 5394811 YP_001384622.1 CDS CLB_2311 NC_009697.1 2451719 2451946 R hypothetical protein complement(2451719..2451946) Clostridium botulinum A str. ATCC 19397 5395797 YP_001384623.1 CDS rpsP NC_009697.1 2451967 2452215 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(2451967..2452215) Clostridium botulinum A str. ATCC 19397 5396837 YP_001384624.1 CDS ffh NC_009697.1 2452246 2453595 R identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; signal recognition particle protein complement(2452246..2453595) Clostridium botulinum A str. ATCC 19397 5396905 YP_001384625.1 CDS CLB_2314 NC_009697.1 2453608 2453940 R identified by match to protein family HMM PF04297; DNA-binding protein complement(2453608..2453940) Clostridium botulinum A str. ATCC 19397 5397290 YP_001384626.1 CDS ftsY NC_009697.1 2454164 2455075 R identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064; signal recognition particle-docking protein FtsY complement(2454164..2455075) Clostridium botulinum A str. ATCC 19397 5398042 YP_001384627.1 CDS smc NC_009697.1 2455238 2458819 R identified by match to protein family HMM PF06470; match to protein family HMM TIGR00650; match to protein family HMM TIGR02168; chromosome segregation protein SMC complement(2455238..2458819) Clostridium botulinum A str. ATCC 19397 5394761 YP_001384628.1 CDS CLB_2317 NC_009697.1 2458832 2458963 R identified by Glimmer3; hypothetical protein complement(2458832..2458963) Clostridium botulinum A str. ATCC 19397 5396157 YP_001384629.1 CDS CLB_2318 NC_009697.1 2459083 2460174 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(2459083..2460174) Clostridium botulinum A str. ATCC 19397 5395064 YP_001384630.1 CDS rnc NC_009697.1 2460167 2460871 R cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III complement(2460167..2460871) Clostridium botulinum A str. ATCC 19397 5394993 YP_001384631.1 CDS acpP NC_009697.1 2460983 2461216 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(2460983..2461216) Clostridium botulinum A str. ATCC 19397 5395939 YP_001384632.1 CDS plsX NC_009697.1 2461294 2462301 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX complement(2461294..2462301) Clostridium botulinum A str. ATCC 19397 5397516 YP_001384633.1 CDS rpmF NC_009697.1 2462391 2462573 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(2462391..2462573) Clostridium botulinum A str. ATCC 19397 5397958 YP_001384634.1 CDS CLB_2323 NC_009697.1 2462587 2463087 R identified by match to protein family HMM PF02620; ribosomal protein L32 family protein complement(2462587..2463087) Clostridium botulinum A str. ATCC 19397 5396912 YP_001384635.1 CDS ackA NC_009697.1 2463205 2464398 R AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase complement(2463205..2464398) Clostridium botulinum A str. ATCC 19397 5396212 YP_001384636.1 CDS eutD NC_009697.1 2464538 2465536 R in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; phosphotransacetylase complement(2464538..2465536) Clostridium botulinum A str. ATCC 19397 5395620 YP_001384637.1 CDS CLB_2326 NC_009697.1 2465870 2466748 R hypothetical protein complement(2465870..2466748) Clostridium botulinum A str. ATCC 19397 5394850 YP_001384638.1 CDS CLB_2328 NC_009697.1 2467115 2467834 R Selenoprotein. identified by similarity to GB:CAB38127.2; D-proline reductase subunit PrdB complement(2467115..2467834) Clostridium botulinum A str. ATCC 19397 5394584 YP_001384639.1 CDS CLB_2329 NC_009697.1 2467864 2468139 R identified by Glimmer3; hypothetical protein complement(2467864..2468139) Clostridium botulinum A str. ATCC 19397 5395237 YP_001384640.1 CDS CLB_2330 NC_009697.1 2468148 2470262 R identified by match to protein family HMM PF09338; D-proline reductase subunit PrdA complement(2468148..2470262) Clostridium botulinum A str. ATCC 19397 5397224 YP_001384641.1 CDS CLB_2333 NC_009697.1 2472601 2473497 R hypothetical protein complement(2472601..2473497) Clostridium botulinum A str. ATCC 19397 5396343 YP_001384642.1 CDS CLB_2334 NC_009697.1 2473809 2475827 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein complement(2473809..2475827) Clostridium botulinum A str. ATCC 19397 5394710 YP_001384643.1 CDS CLB_2336 NC_009697.1 2477107 2478192 R hypothetical protein complement(2477107..2478192) Clostridium botulinum A str. ATCC 19397 5395083 YP_001384644.1 CDS CLB_2337 NC_009697.1 2478261 2479337 R hypothetical protein complement(2478261..2479337) Clostridium botulinum A str. ATCC 19397 5397307 YP_001384645.1 CDS CLB_2338 NC_009697.1 2479554 2479751 R identified by Glimmer3; hypothetical protein complement(2479554..2479751) Clostridium botulinum A str. ATCC 19397 5396071 YP_001384646.1 CDS CLB_2339 NC_009697.1 2479892 2481337 D identified by match to protein family HMM PF00324; amino acid permease 2479892..2481337 Clostridium botulinum A str. ATCC 19397 5396992 YP_001384647.1 CDS CLB_2340 NC_009697.1 2481490 2482359 R hypothetical protein complement(2481490..2482359) Clostridium botulinum A str. ATCC 19397 5396998 YP_001384648.1 CDS CLB_2341 NC_009697.1 2482402 2482527 R identified by Glimmer3; hypothetical protein complement(2482402..2482527) Clostridium botulinum A str. ATCC 19397 5397261 YP_001384649.1 CDS CLB_2342 NC_009697.1 2482617 2482733 R identified by Glimmer3; hypothetical protein complement(2482617..2482733) Clostridium botulinum A str. ATCC 19397 5395875 YP_001384650.1 CDS CLB_2343 NC_009697.1 2482884 2483891 R identified by match to protein family HMM PF05544; proline racemase complement(2482884..2483891) Clostridium botulinum A str. ATCC 19397 5397112 YP_001384651.1 CDS prdE NC_009697.1 2483905 2484375 R PrdE protein complement(2483905..2484375) Clostridium botulinum A str. ATCC 19397 5397051 YP_001384652.1 CDS prdD NC_009697.1 2484389 2485165 R PrdD protein complement(2484389..2485165) Clostridium botulinum A str. ATCC 19397 5396381 YP_001384653.1 CDS prdB NC_009697.1 2485506 2486231 R Selenoprotein. identified by similarity to GB:CAB38127.2; D-proline reductase subunit PrdB complement(2485506..2486231) Clostridium botulinum A str. ATCC 19397 5398112 YP_001384654.1 CDS CLB_2348 NC_009697.1 2486307 2486582 R identified by Glimmer3; hypothetical protein complement(2486307..2486582) Clostridium botulinum A str. ATCC 19397 5395803 YP_001384655.1 CDS prdA NC_009697.1 2486591 2488702 R identified by match to protein family HMM PF09338; D-proline reductase subunit PrdA complement(2486591..2488702) Clostridium botulinum A str. ATCC 19397 5395486 YP_001384656.1 CDS CLB_2352 NC_009697.1 2490684 2491346 R identified by Glimmer3; hypothetical protein complement(2490684..2491346) Clostridium botulinum A str. ATCC 19397 5397199 YP_001384657.1 CDS CLB_2353 NC_009697.1 2491386 2492690 R identified by match to protein family HMM PF01512; electron transport protein complement(2491386..2492690) Clostridium botulinum A str. ATCC 19397 5395507 YP_001384658.1 CDS CLB_2354 NC_009697.1 2492689 2492805 D identified by Glimmer3; hypothetical protein 2492689..2492805 Clostridium botulinum A str. ATCC 19397 5397069 YP_001384659.1 CDS CLB_2355 NC_009697.1 2492961 2493035 R identified by Glimmer3; hypothetical protein complement(2492961..2493035) Clostridium botulinum A str. ATCC 19397 5397663 YP_001384660.1 CDS CLB_2356 NC_009697.1 2493283 2493618 R hypothetical protein complement(2493283..2493618) Clostridium botulinum A str. ATCC 19397 5396756 YP_001384661.1 CDS CLB_2358 NC_009697.1 2493605 2493850 D identified by Glimmer3; hypothetical protein 2493605..2493850 Clostridium botulinum A str. ATCC 19397 5397817 YP_001384662.1 CDS CLB_2357 NC_009697.1 2493815 2494294 R hypothetical protein complement(2493815..2494294) Clostridium botulinum A str. ATCC 19397 5394794 YP_001384663.1 CDS CLB_2359 NC_009697.1 2494398 2494697 R identified by Glimmer3; hypothetical protein complement(2494398..2494697) Clostridium botulinum A str. ATCC 19397 5396600 YP_001384664.1 CDS CLB_2360 NC_009697.1 2494770 2495198 R PrdA domain-containing protein complement(2494770..2495198) Clostridium botulinum A str. ATCC 19397 5397756 YP_001384665.1 CDS CLB_2361 NC_009697.1 2495229 2496539 R identified by match to protein family HMM PF01512; electron transport protein complement(2495229..2496539) Clostridium botulinum A str. ATCC 19397 5396391 YP_001384666.1 CDS CLB_2362 NC_009697.1 2496715 2498469 R identified by match to protein family HMM PF00158; match to protein family HMM PF00571; match to protein family HMM PF00989; match to protein family HMM PF02954; match to protein family HMM PF08448; match to protein family HMM TIGR00229; sensory box sigma-54 dependent transcriptional regulator complement(2496715..2498469) Clostridium botulinum A str. ATCC 19397 5394822 YP_001384667.1 CDS CLB_2363 NC_009697.1 2498805 2500034 D identified by match to protein family HMM PF05636; hypothetical protein 2498805..2500034 Clostridium botulinum A str. ATCC 19397 5394567 YP_001384668.1 CDS CLB_2364 NC_009697.1 2500094 2501260 D identified by match to protein family HMM PF07670; match to protein family HMM TIGR02871; nucleoside recognition domain-containing protein 2500094..2501260 Clostridium botulinum A str. ATCC 19397 5395861 YP_001384669.1 CDS CLB_2365 NC_009697.1 2501261 2501785 R hypothetical protein complement(2501261..2501785) Clostridium botulinum A str. ATCC 19397 5397593 YP_001384670.1 CDS coaD NC_009697.1 2501798 2502292 R Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase complement(2501798..2502292) Clostridium botulinum A str. ATCC 19397 5394653 YP_001384671.1 CDS CLB_2367 NC_009697.1 2502294 2502851 R identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095; methyltransferase complement(2502294..2502851) Clostridium botulinum A str. ATCC 19397 5397487 YP_001384672.1 CDS recG NC_009697.1 2503113 2505152 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(2503113..2505152) Clostridium botulinum A str. ATCC 19397 5396012 YP_001384673.1 CDS CLB_2369 NC_009697.1 2505502 2507127 R identified by match to protein family HMM PF02734; DAK2 domain-containing protein complement(2505502..2507127) Clostridium botulinum A str. ATCC 19397 5397999 YP_001384674.1 CDS CLB_2370 NC_009697.1 2507142 2507492 R identified by match to protein family HMM PF03780; hypothetical protein complement(2507142..2507492) Clostridium botulinum A str. ATCC 19397 5397577 YP_001384675.1 CDS rpmB NC_009697.1 2507692 2507883 D required for 70S ribosome assembly; 50S ribosomal protein L28 2507692..2507883 Clostridium botulinum A str. ATCC 19397 5396465 YP_001384676.1 CDS CLB_2372 NC_009697.1 2507932 2508051 R identified by Glimmer3; hypothetical protein complement(2507932..2508051) Clostridium botulinum A str. ATCC 19397 5396792 YP_001384677.1 CDS CLB_2373 NC_009697.1 2508129 2508284 R hypothetical protein complement(2508129..2508284) Clostridium botulinum A str. ATCC 19397 5395310 YP_001384678.1 CDS CLB_2374 NC_009697.1 2508662 2509306 R identified by match to protein family HMM PF04263; match to protein family HMM TIGR01378; thiamine pyrophosphokinase complement(2508662..2509306) Clostridium botulinum A str. ATCC 19397 5398172 YP_001384679.1 CDS rpe NC_009697.1 2509308 2509958 R catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase complement(2509308..2509958) Clostridium botulinum A str. ATCC 19397 5395575 YP_001384680.1 CDS rsgA NC_009697.1 2509952 2510830 R EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase complement(2509952..2510830) Clostridium botulinum A str. ATCC 19397 5394879 YP_001384681.1 CDS CLB_2377 NC_009697.1 2511037 2512980 R identified by match to protein family HMM PF00069; match to protein family HMM PF03793; match to protein family HMM PF07714; protein kinase complement(2511037..2512980) Clostridium botulinum A str. ATCC 19397 5395671 YP_001384682.1 CDS CLB_2378 NC_009697.1 2512958 2513707 R identified by match to protein family HMM PF00481; protein phosphatase family protein complement(2512958..2513707) Clostridium botulinum A str. ATCC 19397 5396139 YP_001384683.1 CDS CLB_2379 NC_009697.1 2513726 2514754 R 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N complement(2513726..2514754) Clostridium botulinum A str. ATCC 19397 5397078 YP_001384684.1 CDS sun NC_009697.1 2514766 2516094 R identified by match to protein family HMM PF01029; match to protein family HMM PF01189; match to protein family HMM TIGR00563; ribosomal RNA small subunit methyltransferase B complement(2514766..2516094) Clostridium botulinum A str. ATCC 19397 5397006 YP_001384685.1 CDS CLB_2381 NC_009697.1 2516115 2516831 R identified by match to protein family HMM PF04298; neutral zinc metallopeptidase complement(2516115..2516831) Clostridium botulinum A str. ATCC 19397 5394838 YP_001384686.1 CDS fmt NC_009697.1 2517149 2518090 R modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase complement(2517149..2518090) Clostridium botulinum A str. ATCC 19397 5394568 YP_001384687.1 CDS def NC_009697.1 2518107 2518550 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(2518107..2518550) Clostridium botulinum A str. ATCC 19397 5397531 YP_001384688.1 CDS priA NC_009697.1 2518578 2520785 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(2518578..2520785) Clostridium botulinum A str. ATCC 19397 5394777 YP_001384689.1 CDS coaBC NC_009697.1 2521123 2522310 R catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase complement(2521123..2522310) Clostridium botulinum A str. ATCC 19397 5394739 YP_001384690.1 CDS rpoZ NC_009697.1 2522312 2522530 R Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega complement(2522312..2522530) Clostridium botulinum A str. ATCC 19397 5395556 YP_001384691.1 CDS gmk NC_009697.1 2522511 2523140 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(2522511..2523140) Clostridium botulinum A str. ATCC 19397 5396927 YP_001384692.1 CDS CLB_2388 NC_009697.1 2523140 2523415 R identified by match to protein family HMM PF04025; hypothetical protein complement(2523140..2523415) Clostridium botulinum A str. ATCC 19397 5396199 YP_001384693.1 CDS CLB_2389 NC_009697.1 2523431 2524309 R identified by match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255; hypothetical protein complement(2523431..2524309) Clostridium botulinum A str. ATCC 19397 5396103 YP_001384694.1 CDS ansA NC_009697.1 2524503 2525504 R identified by match to protein family HMM PF00710; type II L-asparaginase complement(2524503..2525504) Clostridium botulinum A str. ATCC 19397 5397952 YP_001384695.1 CDS CLB_2391 NC_009697.1 2526055 2526216 D hypothetical protein 2526055..2526216 Clostridium botulinum A str. ATCC 19397 5396629 YP_001384696.1 CDS spoIVA NC_009697.1 2526944 2528425 R identified by match to protein family HMM TIGR02836; stage IV sporulation protein A complement(2526944..2528425) Clostridium botulinum A str. ATCC 19397 5395304 YP_001384697.1 CDS CLB_2393 NC_009697.1 2528810 2528938 R identified by Glimmer3; hypothetical protein complement(2528810..2528938) Clostridium botulinum A str. ATCC 19397 5397893 YP_001384699.1 CDS gpsA NC_009697.1 2529022 2530020 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(2529022..2530020) Clostridium botulinum A str. ATCC 19397 5397463 YP_001384700.1 CDS engA NC_009697.1 2530191 2531510 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(2530191..2531510) Clostridium botulinum A str. ATCC 19397 5394713 YP_001384701.1 CDS CLB_2397 NC_009697.1 2531513 2532847 R identified by match to protein family HMM PF04459; hypothetical protein complement(2531513..2532847) Clostridium botulinum A str. ATCC 19397 5397501 YP_001384702.1 CDS phoU NC_009697.1 2533299 2533952 R identified by match to protein family HMM PF01895; match to protein family HMM TIGR02135; phosphate transport system regulatory protein PhoU complement(2533299..2533952) Clostridium botulinum A str. ATCC 19397 5395623 YP_001384703.1 CDS pstB NC_009697.1 2533982 2534731 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein complement(2533982..2534731) Clostridium botulinum A str. ATCC 19397 5396464 YP_001384704.1 CDS pstA NC_009697.1 2534744 2535628 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974; phosphate ABC transporter permease complement(2534744..2535628) Clostridium botulinum A str. ATCC 19397 5397285 YP_001384705.1 CDS pstC NC_009697.1 2535628 2536551 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138; phosphate ABC transporter, permease PstC complement(2535628..2536551) Clostridium botulinum A str. ATCC 19397 5397404 YP_001384706.1 CDS pstS NC_009697.1 2536759 2537631 R identified by match to protein family HMM PF01547; match to protein family HMM TIGR02136; phosphate ABC transporter, phosphate-binding protein complement(2536759..2537631) Clostridium botulinum A str. ATCC 19397 5395981 YP_001384707.1 CDS CLB_2403 NC_009697.1 2537878 2539587 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; phosphate regulon sensor protein complement(2537878..2539587) Clostridium botulinum A str. ATCC 19397 5395908 YP_001384708.1 CDS CLB_2404 NC_009697.1 2539599 2540297 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; phosphate regulon DNA-binding response regulator complement(2539599..2540297) Clostridium botulinum A str. ATCC 19397 5396310 YP_001384709.1 CDS CLB_2405 NC_009697.1 2540308 2541027 R identified by match to protein family HMM PF02578; match to protein family HMM TIGR00726; hypothetical protein complement(2540308..2541027) Clostridium botulinum A str. ATCC 19397 5395435 YP_001384710.1 CDS nrdR NC_009697.1 2541476 2541931 R identified by match to protein family HMM PF03477; match to protein family HMM TIGR00244; transcriptional regulator NrdR complement(2541476..2541931) Clostridium botulinum A str. ATCC 19397 5397760 YP_001384711.1 CDS CLB_2407 NC_009697.1 2542062 2542325 R identified by match to protein family HMM PF05239; match to protein family HMM TIGR02888; PRC-barrel domain-containing protein complement(2542062..2542325) Clostridium botulinum A str. ATCC 19397 5397434 YP_001384712.1 CDS sigG NC_009697.1 2542472 2543245 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed after engulfment; this factor is involved in the transcription of small acid-soluble proteins involved in protecting the forespore chromatin; sporulation sigma factor SigG complement(2542472..2543245) Clostridium botulinum A str. ATCC 19397 5396649 YP_001384713.1 CDS sigE NC_009697.1 2543320 2544027 R sigma-29; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell at the onset of sporulation; sporulation sigma factor SigE complement(2543320..2544027) Clostridium botulinum A str. ATCC 19397 5396763 YP_001384714.1 CDS spoIIGA NC_009697.1 2544039 2544836 R identified by match to protein family HMM PF03419; match to protein family HMM TIGR02854; sporulation factor SpoIIGA complement(2544039..2544836) Clostridium botulinum A str. ATCC 19397 5398166 YP_001384715.1 CDS ftsZ NC_009697.1 2545149 2546258 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(2545149..2546258) Clostridium botulinum A str. ATCC 19397 5396147 YP_001384716.1 CDS ftsA NC_009697.1 2546281 2547534 R identified by match to protein family HMM PF02491; match to protein family HMM TIGR01174; cell division protein FtsA complement(2546281..2547534) Clostridium botulinum A str. ATCC 19397 5398031 YP_001384717.1 CDS CLB_2413 NC_009697.1 2547691 2548965 R identified by match to protein family HMM PF00535; glycosyl transferase family protein complement(2547691..2548965) Clostridium botulinum A str. ATCC 19397 5398043 YP_001384718.1 CDS CLB_2414 NC_009697.1 2549403 2549546 D identified by Glimmer3; hypothetical protein 2549403..2549546 Clostridium botulinum A str. ATCC 19397 5396280 YP_001384719.1 CDS pilT NC_009697.1 2549624 2550676 R identified by match to protein family HMM PF00437; match to protein family HMM TIGR01420; twitching motility protein complement(2549624..2550676) Clostridium botulinum A str. ATCC 19397 5396051 YP_001384720.1 CDS aroE NC_009697.1 2550678 2551454 R identified by match to protein family HMM PF01488; match to protein family HMM PF08501; shikimate 5-dehydrogenase complement(2550678..2551454) Clostridium botulinum A str. ATCC 19397 5395119 YP_001384721.1 CDS CLB_2417 NC_009697.1 2551593 2551883 R identified by match to protein family HMM PF04545; DNA-dependent RNA polymerase sigma subunit complement(2551593..2551883) Clostridium botulinum A str. ATCC 19397 5395476 YP_001384722.1 CDS CLB_2418 NC_009697.1 2551935 2552054 R identified by Glimmer3; hypothetical protein complement(2551935..2552054) Clostridium botulinum A str. ATCC 19397 5397203 YP_001384723.1 CDS CLB_2419 NC_009697.1 2552288 2552536 D identified by match to protein family HMM PF01381; DNA-binding protein 2552288..2552536 Clostridium botulinum A str. ATCC 19397 5395887 YP_001384724.1 CDS CLB_2420 NC_009697.1 2552736 2552981 D identified by match to protein family HMM PF01381; DNA-binding protein 2552736..2552981 Clostridium botulinum A str. ATCC 19397 5395537 YP_001384725.1 CDS CLB_2421 NC_009697.1 2552971 2553195 D identified by Glimmer3; hypothetical protein 2552971..2553195 Clostridium botulinum A str. ATCC 19397 5397543 YP_001384726.1 CDS CLB_2422 NC_009697.1 2553233 2553742 R lipoprotein complement(2553233..2553742) Clostridium botulinum A str. ATCC 19397 5395455 YP_001384727.1 CDS CLB_2423 NC_009697.1 2553810 2553959 R identified by Glimmer3; hypothetical protein complement(2553810..2553959) Clostridium botulinum A str. ATCC 19397 5397681 YP_001384728.1 CDS CLB_2424 NC_009697.1 2553937 2554845 R identified by match to protein family HMM PF01076; plasmid recombination enzyme complement(2553937..2554845) Clostridium botulinum A str. ATCC 19397 5396736 YP_001384729.1 CDS CLB_2425 NC_009697.1 2554836 2556458 R identified by match to protein family HMM PF02534; TraG/TraD family protein complement(2554836..2556458) Clostridium botulinum A str. ATCC 19397 5396377 YP_001384730.1 CDS CLB_2426 NC_009697.1 2556895 2557095 R identified by match to protein family HMM PF01381; DNA-binding protein complement(2556895..2557095) Clostridium botulinum A str. ATCC 19397 5395034 YP_001384731.1 CDS CLB_2427 NC_009697.1 2557334 2558038 R identified by match to protein family HMM PF01510; N-acetylmuramoyl-L-alanine amidase complement(2557334..2558038) Clostridium botulinum A str. ATCC 19397 5395051 YP_001384732.1 CDS CLB_2428 NC_009697.1 2558078 2558272 R hypothetical protein complement(2558078..2558272) Clostridium botulinum A str. ATCC 19397 5396300 YP_001384733.1 CDS CLB_2429 NC_009697.1 2558286 2558540 R hypothetical protein complement(2558286..2558540) Clostridium botulinum A str. ATCC 19397 5396386 YP_001384734.1 CDS CLB_2430 NC_009697.1 2558619 2559494 R identified by Glimmer3; hypothetical protein complement(2558619..2559494) Clostridium botulinum A str. ATCC 19397 5396733 YP_001384735.1 CDS CLB_2431 NC_009697.1 2559646 2559819 R identified by Glimmer3; hypothetical protein complement(2559646..2559819) Clostridium botulinum A str. ATCC 19397 5395794 YP_001384736.1 CDS CLB_2432 NC_009697.1 2560043 2560585 R identified by Glimmer3; hypothetical protein complement(2560043..2560585) Clostridium botulinum A str. ATCC 19397 5397648 YP_001384737.1 CDS CLB_2433 NC_009697.1 2560915 2561097 R identified by similarity to GB:AAX53493.1; hypothetical protein complement(2560915..2561097) Clostridium botulinum A str. ATCC 19397 5397079 YP_001384738.1 CDS CLB_2434 NC_009697.1 2561099 2561425 R identified by Glimmer3; hypothetical protein complement(2561099..2561425) Clostridium botulinum A str. ATCC 19397 5398170 YP_001384739.1 CDS CLB_2435 NC_009697.1 2561437 2562846 R identified by similarity to GB:BAD74826.1; hypothetical protein complement(2561437..2562846) Clostridium botulinum A str. ATCC 19397 5398089 YP_001384740.1 CDS CLB_2436 NC_009697.1 2562846 2563724 R identified by similarity to GB:BAD74827.1; hypothetical protein complement(2562846..2563724) Clostridium botulinum A str. ATCC 19397 5396422 YP_001384741.1 CDS CLB_2437 NC_009697.1 2563917 2564783 R phage tail protein complement(2563917..2564783) Clostridium botulinum A str. ATCC 19397 5397186 YP_001384742.1 CDS CLB_2438 NC_009697.1 2564800 2570112 R identified by match to protein family HMM TIGR01760; TP901 family phage tail tape measure protein complement(2564800..2570112) Clostridium botulinum A str. ATCC 19397 5396939 YP_001384743.1 CDS CLB_2439 NC_009697.1 2570367 2570693 R identified by similarity to GB:AAK79849.1; hypothetical protein complement(2570367..2570693) Clostridium botulinum A str. ATCC 19397 5396516 YP_001384744.1 CDS CLB_2440 NC_009697.1 2570729 2571310 R identified by match to protein family HMM TIGR01603; phi13 family phage major tail protein complement(2570729..2571310) Clostridium botulinum A str. ATCC 19397 5397477 YP_001384745.1 CDS CLB_2441 NC_009697.1 2571313 2571657 R identified by similarity to GB:AAU40455.1; hypothetical protein complement(2571313..2571657) Clostridium botulinum A str. ATCC 19397 5395456 YP_001384746.1 CDS CLB_2442 NC_009697.1 2571654 2572028 R identified by match to protein family HMM PF07772; match to protein family HMM TIGR01725; HK97 family phage protein complement(2571654..2572028) Clostridium botulinum A str. ATCC 19397 5396470 YP_001384747.1 CDS CLB_2443 NC_009697.1 2572030 2572356 R identified by match to protein family HMM TIGR01563; phage head-tail adaptor complement(2572030..2572356) Clostridium botulinum A str. ATCC 19397 5395072 YP_001384748.1 CDS CLB_2444 NC_009697.1 2572337 2572657 R identified by match to protein family HMM PF05135; match to protein family HMM TIGR01560; QlrG family phage protein complement(2572337..2572657) Clostridium botulinum A str. ATCC 19397 5397888 YP_001384749.1 CDS CLB_2445 NC_009697.1 2572674 2572829 R identified by match to protein family HMM PF07498; Rho termination factor domain-containing protein complement(2572674..2572829) Clostridium botulinum A str. ATCC 19397 5395915 YP_001384750.1 CDS CLB_2446 NC_009697.1 2572849 2573976 R identified by match to protein family HMM PF05065; phage capsid protein complement(2572849..2573976) Clostridium botulinum A str. ATCC 19397 5397164 YP_001384751.1 CDS CLB_2447 NC_009697.1 2573969 2574727 R identified by match to protein family HMM PF00574; Clp protease complement(2573969..2574727) Clostridium botulinum A str. ATCC 19397 5396563 YP_001384752.1 CDS CLB_2448 NC_009697.1 2574717 2575901 R identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537; HK97 family phage portal protein complement(2574717..2575901) Clostridium botulinum A str. ATCC 19397 5396750 YP_001384753.1 CDS CLB_2449 NC_009697.1 2575917 2577617 R identified by match to protein family HMM PF03354; phage terminase, large subunit complement(2575917..2577617) Clostridium botulinum A str. ATCC 19397 5396627 YP_001384754.1 CDS CLB_2450 NC_009697.1 2577614 2578078 R identified by match to protein family HMM PF05119; match to protein family HMM TIGR01558; P27 family phage terminase small subunit complement(2577614..2578078) Clostridium botulinum A str. ATCC 19397 5396888 YP_001384755.1 CDS CLB_2451 NC_009697.1 2578114 2578467 R identified by similarity to GB:AAK79179.1; hypothetical protein complement(2578114..2578467) Clostridium botulinum A str. ATCC 19397 5394532 YP_001384756.1 CDS CLB_2452 NC_009697.1 2578554 2579027 R identified by similarity to GB:ABG87918.1; hypothetical protein complement(2578554..2579027) Clostridium botulinum A str. ATCC 19397 5396543 YP_001384757.1 CDS CLB_2453 NC_009697.1 2579027 2579320 R identified by similarity to GB:AAF19142.1; hypothetical protein complement(2579027..2579320) Clostridium botulinum A str. ATCC 19397 5397405 YP_001384758.1 CDS CLB_2454 NC_009697.1 2579322 2579627 R identified by Glimmer3; hypothetical protein complement(2579322..2579627) Clostridium botulinum A str. ATCC 19397 5395509 YP_001384759.1 CDS CLB_2455 NC_009697.1 2579892 2580074 R identified by Glimmer3; hypothetical protein complement(2579892..2580074) Clostridium botulinum A str. ATCC 19397 5395524 YP_001384760.1 CDS CLB_2456 NC_009697.1 2580103 2580378 R identified by similarity to GB:AAB59285.1; hypothetical protein complement(2580103..2580378) Clostridium botulinum A str. ATCC 19397 5397005 YP_001384761.1 CDS CLB_2457 NC_009697.1 2580532 2581077 R identified by match to protein family HMM PF00589; phage integrase family site specific recombinase complement(2580532..2581077) Clostridium botulinum A str. ATCC 19397 5394892 YP_001384762.1 CDS CLB_2458 NC_009697.1 2581074 2581289 R identified by similarity to GB:AAK79876.1; hypothetical protein complement(2581074..2581289) Clostridium botulinum A str. ATCC 19397 5397953 YP_001384763.1 CDS CLB_2459 NC_009697.1 2581513 2581902 R identified by Glimmer3; hypothetical protein complement(2581513..2581902) Clostridium botulinum A str. ATCC 19397 5394820 YP_001384764.1 CDS CLB_2460 NC_009697.1 2581892 2582059 R identified by Glimmer3; hypothetical protein complement(2581892..2582059) Clostridium botulinum A str. ATCC 19397 5397174 YP_001384765.1 CDS CLB_2461 NC_009697.1 2582217 2583062 R identified by match to protein family HMM PF00589; match to protein family HMM PF02899; phage integrase family site specific recombinase complement(2582217..2583062) Clostridium botulinum A str. ATCC 19397 5396460 YP_001384766.1 CDS CLB_2462 NC_009697.1 2583353 2583484 R identified by Glimmer3; hypothetical protein complement(2583353..2583484) Clostridium botulinum A str. ATCC 19397 5394691 YP_001384767.1 CDS CLB_2463 NC_009697.1 2583575 2584624 R identified by similarity to GB:ABK61948.1; hypothetical protein complement(2583575..2584624) Clostridium botulinum A str. ATCC 19397 5397878 YP_001384768.1 CDS CLB_2464 NC_009697.1 2584659 2584859 R identified by Glimmer3; hypothetical protein complement(2584659..2584859) Clostridium botulinum A str. ATCC 19397 5397480 YP_001384769.1 CDS CLB_2465 NC_009697.1 2584903 2585850 R identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675; DNA-cytosine methyltransferase family protein complement(2584903..2585850) Clostridium botulinum A str. ATCC 19397 5395790 YP_001384770.1 CDS CLB_2466 NC_009697.1 2585893 2586612 R identified by Glimmer3; hypothetical protein complement(2585893..2586612) Clostridium botulinum A str. ATCC 19397 5395521 YP_001384771.1 CDS CLB_2467 NC_009697.1 2586677 2587045 R identified by match to protein family HMM PF03819; MazG nucleotide pyrophosphohydrolase domain-containing protein complement(2586677..2587045) Clostridium botulinum A str. ATCC 19397 5396991 YP_001384772.1 CDS CLB_2468 NC_009697.1 2587045 2587587 R identified by Glimmer3; hypothetical protein complement(2587045..2587587) Clostridium botulinum A str. ATCC 19397 5398003 YP_001384773.1 CDS CLB_2469 NC_009697.1 2587588 2588421 R identified by match to protein family HMM TIGR01714; hypothetical protein complement(2587588..2588421) Clostridium botulinum A str. ATCC 19397 5397228 YP_001384774.1 CDS CLB_2470 NC_009697.1 2588517 2588786 R identified by similarity to GB:ABB16063.1; hypothetical protein complement(2588517..2588786) Clostridium botulinum A str. ATCC 19397 5395622 YP_001384775.1 CDS CLB_2471 NC_009697.1 2588803 2588985 R identified by similarity to GB:ABK61203.1; hypothetical protein complement(2588803..2588985) Clostridium botulinum A str. ATCC 19397 5397469 YP_001384776.1 CDS CLB_2472 NC_009697.1 2588987 2589247 R identified by Glimmer3; hypothetical protein complement(2588987..2589247) Clostridium botulinum A str. ATCC 19397 5396804 YP_001384777.1 CDS CLB_2474 NC_009697.1 2589313 2589513 D identified by Glimmer3; hypothetical protein 2589313..2589513 Clostridium botulinum A str. ATCC 19397 5395695 YP_001384778.1 CDS CLB_2473 NC_009697.1 2589503 2589685 R identified by Glimmer3; hypothetical protein complement(2589503..2589685) Clostridium botulinum A str. ATCC 19397 5396678 YP_001384779.1 CDS CLB_2475 NC_009697.1 2589698 2590462 R hypothetical protein complement(2589698..2590462) Clostridium botulinum A str. ATCC 19397 5394665 YP_001384780.1 CDS CLB_2476 NC_009697.1 2590580 2590696 R identified by Glimmer3; hypothetical protein complement(2590580..2590696) Clostridium botulinum A str. ATCC 19397 5394608 YP_001384781.1 CDS CLB_2477 NC_009697.1 2590834 2591037 R identified by match to protein family HMM PF01381; DNA-binding protein complement(2590834..2591037) Clostridium botulinum A str. ATCC 19397 5397098 YP_001384782.1 CDS CLB_2478 NC_009697.1 2591244 2591609 D identified by match to protein family HMM PF01381; DNA-binding protein 2591244..2591609 Clostridium botulinum A str. ATCC 19397 5395967 YP_001384783.1 CDS CLB_2479 NC_009697.1 2591621 2593135 D identified by match to protein family HMM PF00239; match to protein family HMM PF07508; resolvase family protein 2591621..2593135 Clostridium botulinum A str. ATCC 19397 5395851 YP_001384784.1 CDS CLB_2480 NC_009697.1 2593141 2593575 R identified by match to protein family HMM PF04542; RNA polymerase sigma-K factor complement(2593141..2593575) Clostridium botulinum A str. ATCC 19397 5396107 YP_001384785.1 CDS CLB_2481 NC_009697.1 2594001 2594180 R hypothetical protein complement(2594001..2594180) Clostridium botulinum A str. ATCC 19397 5397676 YP_001384786.1 CDS CLB_2482 NC_009697.1 2594614 2594751 R hypothetical protein complement(2594614..2594751) Clostridium botulinum A str. ATCC 19397 5397758 YP_001384787.1 CDS CLB_2484 NC_009697.1 2595952 2596050 D identified by Glimmer3; hypothetical protein 2595952..2596050 Clostridium botulinum A str. ATCC 19397 5396001 YP_001384788.1 CDS CLB_2485 NC_009697.1 2596487 2597155 R identified by match to protein family HMM TIGR02271; hypothetical protein complement(2596487..2597155) Clostridium botulinum A str. ATCC 19397 5395334 YP_001384789.1 CDS CLB_2486 NC_009697.1 2597234 2597710 R identified by match to protein family HMM TIGR02271; hypothetical protein complement(2597234..2597710) Clostridium botulinum A str. ATCC 19397 5397578 YP_001384790.1 CDS CLB_2489 NC_009697.1 2598763 2599047 R identified by Glimmer3; hypothetical protein complement(2598763..2599047) Clostridium botulinum A str. ATCC 19397 5396272 YP_001384791.1 CDS CLB_2490 NC_009697.1 2599058 2599861 R hypothetical protein complement(2599058..2599861) Clostridium botulinum A str. ATCC 19397 5395170 YP_001384792.1 CDS CLB_2491 NC_009697.1 2599842 2600645 R identified by match to protein family HMM PF03837; match to protein family HMM TIGR00616; recombinase complement(2599842..2600645) Clostridium botulinum A str. ATCC 19397 5396650 YP_001384793.1 CDS CLB_2492 NC_009697.1 2600838 2601086 D DNA-binding protein 2600838..2601086 Clostridium botulinum A str. ATCC 19397 5396194 YP_001384794.1 CDS CLB_2493 NC_009697.1 2601293 2601445 D identified by Glimmer3; hypothetical protein 2601293..2601445 Clostridium botulinum A str. ATCC 19397 5396161 YP_001384795.1 CDS CLB_2494 NC_009697.1 2601663 2603333 R identified by match to protein family HMM PF00905; penicillin-binding protein complement(2601663..2603333) Clostridium botulinum A str. ATCC 19397 5396769 YP_001384796.1 CDS udk NC_009697.1 2603419 2604039 R functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase complement(2603419..2604039) Clostridium botulinum A str. ATCC 19397 5394825 YP_001384797.1 CDS CLB_2496 NC_009697.1 2604187 2605413 R identified by match to protein family HMM PF01136; U32 family peptidase complement(2604187..2605413) Clostridium botulinum A str. ATCC 19397 5395758 YP_001384798.1 CDS CLB_2497 NC_009697.1 2605406 2606062 R identified by match to protein family HMM PF01596; O-methyltransferase family protein complement(2605406..2606062) Clostridium botulinum A str. ATCC 19397 5397447 YP_001384799.1 CDS CLB_2498 NC_009697.1 2606145 2607176 R identified by match to protein family HMM PF02618; match to protein family HMM TIGR00247; hypothetical protein complement(2606145..2607176) Clostridium botulinum A str. ATCC 19397 5395342 YP_001384800.1 CDS typA NC_009697.1 2607254 2609080 R identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394; GTP-binding protein TypA complement(2607254..2609080) Clostridium botulinum A str. ATCC 19397 5395284 YP_001384801.1 CDS CLB_2500 NC_009697.1 2609724 2611433 R identified by match to protein family HMM PF00753; match to protein family HMM PF07521; match to protein family HMM TIGR00649; RNA-metabolizing metallo-beta-lactamase family protein complement(2609724..2611433) Clostridium botulinum A str. ATCC 19397 5397650 YP_001384802.1 CDS CLB_2501 NC_009697.1 2611481 2611933 R identified by match to protein family HMM PF01475; FUR family transcriptional regulator complement(2611481..2611933) Clostridium botulinum A str. ATCC 19397 5396166 YP_001384803.1 CDS CLB_2502 NC_009697.1 2612055 2612309 R identified by match to protein family HMM PF06949; hypothetical protein complement(2612055..2612309) Clostridium botulinum A str. ATCC 19397 5395246 YP_001384804.1 CDS CLB_2503 NC_009697.1 2612323 2612736 R similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein complement(2612323..2612736) Clostridium botulinum A str. ATCC 19397 5396584 YP_001384805.1 CDS CLB_2504 NC_009697.1 2612943 2613194 R identified by match to protein family HMM PF06135; hypothetical protein complement(2612943..2613194) Clostridium botulinum A str. ATCC 19397 5394817 YP_001384806.1 CDS alaS NC_009697.1 2613309 2615948 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(2613309..2615948) Clostridium botulinum A str. ATCC 19397 5397668 YP_001384807.1 CDS CLB_2506 NC_009697.1 2616447 2617475 R identified by match to protein family HMM PF01594; hypothetical protein complement(2616447..2617475) Clostridium botulinum A str. ATCC 19397 5394933 YP_001384808.1 CDS CLB_2507 NC_009697.1 2617488 2617976 R PRC-barrel domain-containing protein complement(2617488..2617976) Clostridium botulinum A str. ATCC 19397 5396985 YP_001384809.1 CDS CLB_2508 NC_009697.1 2618158 2618586 R identified by match to protein family HMM PF01592; iron-sulfur cluster assembly protein complement(2618158..2618586) Clostridium botulinum A str. ATCC 19397 5396788 YP_001384810.1 CDS iscS-2 NC_009697.1 2618588 2619781 R identified by match to protein family HMM PF00266; match to protein family HMM PF01212; cysteine desulfurase complement(2618588..2619781) Clostridium botulinum A str. ATCC 19397 5396676 YP_001384811.1 CDS CLB_2510 NC_009697.1 2619774 2620220 R identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; rrF2 family protein complement(2619774..2620220) Clostridium botulinum A str. ATCC 19397 5395084 YP_001384812.1 CDS CLB_2511 NC_009697.1 2620440 2621690 R identified by match to protein family HMM PF00004; recombination factor protein RarA complement(2620440..2621690) Clostridium botulinum A str. ATCC 19397 5396187 YP_001384813.1 CDS hisK NC_009697.1 2622088 2622855 R identified by match to protein family HMM PF02811; match to protein family HMM TIGR01856; histidinol-phosphatase complement(2622088..2622855) Clostridium botulinum A str. ATCC 19397 5396647 YP_001384814.1 CDS CLB_2513 NC_009697.1 2623222 2624130 R identified by match to protein family HMM PF03547; auxin efflux carrier family protein complement(2623222..2624130) Clostridium botulinum A str. ATCC 19397 5396398 YP_001384815.1 CDS CLB_2514 NC_009697.1 2624238 2625104 R identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762; DegV family protein complement(2624238..2625104) Clostridium botulinum A str. ATCC 19397 5395150 YP_001384816.1 CDS CLB_2515 NC_009697.1 2625432 2626016 D identified by match to protein family HMM PF01206; hypothetical protein 2625432..2626016 Clostridium botulinum A str. ATCC 19397 5397391 YP_001384817.1 CDS CLB_2516 NC_009697.1 2626268 2627257 R catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase complement(2626268..2627257) Clostridium botulinum A str. ATCC 19397 5395885 YP_001384818.1 CDS CLB_2517 NC_009697.1 2627379 2628746 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein complement(2627379..2628746) Clostridium botulinum A str. ATCC 19397 5394801 YP_001384819.1 CDS CLB_2518 NC_009697.1 2629491 2630825 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein complement(2629491..2630825) Clostridium botulinum A str. ATCC 19397 5395701 YP_001384820.1 CDS CLB_2519 NC_009697.1 2631202 2631855 D hypothetical protein 2631202..2631855 Clostridium botulinum A str. ATCC 19397 5394738 YP_001384821.1 CDS CLB_2520 NC_009697.1 2631993 2632469 R copper amine oxidase domain-containing protein complement(2631993..2632469) Clostridium botulinum A str. ATCC 19397 5395866 YP_001384822.1 CDS CLB_2521 NC_009697.1 2632833 2636594 R identified by match to protein family HMM PF02769; match to protein family HMM TIGR01857; phosphoribosylformylglycinamidine synthase complement(2632833..2636594) Clostridium botulinum A str. ATCC 19397 5396798 YP_001384823.1 CDS CLB_2522 NC_009697.1 2636793 2638142 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein complement(2636793..2638142) Clostridium botulinum A str. ATCC 19397 5395118 YP_001384824.1 CDS CLB_2523 NC_009697.1 2638139 2640616 R identified by match to protein family HMM PF00391; match to protein family HMM PF01326; phosphoenolpyruvate synthase complement(2638139..2640616) Clostridium botulinum A str. ATCC 19397 5395233 YP_001384825.1 CDS CLB_2524 NC_009697.1 2640621 2640896 R acyl carrier protein complement(2640621..2640896) Clostridium botulinum A str. ATCC 19397 5395405 YP_001384826.1 CDS CLB_2525 NC_009697.1 2640902 2642440 R identified by match to protein family HMM PF00501; acyl-CoA synthetase complement(2640902..2642440) Clostridium botulinum A str. ATCC 19397 5395490 YP_001384827.1 CDS CLB_2526 NC_009697.1 2642457 2643467 R identified by match to protein family HMM PF08541; match to protein family HMM PF08545; 3-oxoacyl-(acyl-carrier-protein) synthase III complement(2642457..2643467) Clostridium botulinum A str. ATCC 19397 5394700 YP_001384828.1 CDS CLB_2527 NC_009697.1 2643476 2644333 R bacT protein complement(2643476..2644333) Clostridium botulinum A str. ATCC 19397 5396201 YP_001384829.1 CDS CLB_2528 NC_009697.1 2644374 2646203 R identified by match to protein family HMM PF00501; match to protein family HMM PF00550; nonribosomal peptide synthetase complement(2644374..2646203) Clostridium botulinum A str. ATCC 19397 5398178 YP_001384830.1 CDS CLB_2529 NC_009697.1 2646244 2646756 R identified by match to protein family HMM PF00583; acetyltransferase complement(2646244..2646756) Clostridium botulinum A str. ATCC 19397 5394559 YP_001384831.1 CDS CLB_2530 NC_009697.1 2646760 2647008 R D-alanyl carrier protein-like protein complement(2646760..2647008) Clostridium botulinum A str. ATCC 19397 5394878 YP_001384832.1 CDS CLB_2531 NC_009697.1 2647017 2648033 R hypothetical protein complement(2647017..2648033) Clostridium botulinum A str. ATCC 19397 5397721 YP_001384833.1 CDS CLB_2532 NC_009697.1 2648030 2649223 R seryl-tRNA synthetase complement(2648030..2649223) Clostridium botulinum A str. ATCC 19397 5395367 YP_001384834.1 CDS CLB_2533 NC_009697.1 2649242 2649982 R identified by Glimmer3; hypothetical protein complement(2649242..2649982) Clostridium botulinum A str. ATCC 19397 5396284 YP_001384835.1 CDS argF NC_009697.1 2650448 2651449 R catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase complement(2650448..2651449) Clostridium botulinum A str. ATCC 19397 5396752 YP_001384836.1 CDS arcC NC_009697.1 2651544 2652488 R catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase complement(2651544..2652488) Clostridium botulinum A str. ATCC 19397 5398090 YP_001384837.1 CDS glyA NC_009697.1 2653052 2654293 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(2653052..2654293) Clostridium botulinum A str. ATCC 19397 5396836 YP_001384838.1 CDS CLB_2537 NC_009697.1 2654467 2655237 D identified by match to protein family HMM PF06738; hypothetical protein 2654467..2655237 Clostridium botulinum A str. ATCC 19397 5396866 YP_001384839.1 CDS CLB_2538 NC_009697.1 2655234 2655722 D hypothetical protein 2655234..2655722 Clostridium botulinum A str. ATCC 19397 5397895 YP_001384840.1 CDS CLB_2539 NC_009697.1 2655789 2656058 R identified by match to protein family HMM PF02583; hypothetical protein complement(2655789..2656058) Clostridium botulinum A str. ATCC 19397 5394841 YP_001384841.1 CDS CLB_2540 NC_009697.1 2656259 2657083 R identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD family hydrolase complement(2656259..2657083) Clostridium botulinum A str. ATCC 19397 5394874 YP_001384842.1 CDS CLB_2541 NC_009697.1 2657196 2657672 D lipoprotein 2657196..2657672 Clostridium botulinum A str. ATCC 19397 5396270 YP_001384843.1 CDS CLB_2542 NC_009697.1 2658083 2662948 D identified by Glimmer3; hypothetical protein 2658083..2662948 Clostridium botulinum A str. ATCC 19397 5396863 YP_001384844.1 CDS CLB_2543 NC_009697.1 2663025 2664248 D identified by Glimmer3; hypothetical protein 2663025..2664248 Clostridium botulinum A str. ATCC 19397 5395995 YP_001384845.1 CDS CLB_2544 NC_009697.1 2664402 2665457 D identified by Glimmer3; hypothetical protein 2664402..2665457 Clostridium botulinum A str. ATCC 19397 5395416 YP_001384846.1 CDS CLB_2545 NC_009697.1 2665796 2666488 D hypothetical protein 2665796..2666488 Clostridium botulinum A str. ATCC 19397 5397180 YP_001384847.1 CDS CLB_2546 NC_009697.1 2666918 2668453 R catalyzes the removal of amino acids from the N termini of peptides; aminopeptidase 1 complement(2666918..2668453) Clostridium botulinum A str. ATCC 19397 5396209 YP_001384848.1 CDS CLB_2547 NC_009697.1 2668444 2669379 R identified by match to protein family HMM PF01544; magnesium and cobalt transport protein CorA complement(2668444..2669379) Clostridium botulinum A str. ATCC 19397 5394679 YP_001384849.1 CDS CLB_2548 NC_009697.1 2669805 2670359 R identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; 5-formyltetrahydrofolate cyclo-ligase complement(2669805..2670359) Clostridium botulinum A str. ATCC 19397 5397316 YP_001384850.1 CDS hprK NC_009697.1 2670352 2671275 R catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase complement(2670352..2671275) Clostridium botulinum A str. ATCC 19397 5396502 YP_001384851.1 CDS CLB_2550 NC_009697.1 2671307 2671495 R identified by match to protein family HMM PF05979; hypothetical protein complement(2671307..2671495) Clostridium botulinum A str. ATCC 19397 5395224 YP_001384852.1 CDS CLB_2551 NC_009697.1 2671666 2672403 R identified by match to protein family HMM PF09335; DedA family protein complement(2671666..2672403) Clostridium botulinum A str. ATCC 19397 5397984 YP_001384853.1 CDS CLB_2552 NC_009697.1 2672369 2673088 R identified by match to protein family HMM PF09335; DedA family protein complement(2672369..2673088) Clostridium botulinum A str. ATCC 19397 5396685 YP_001384854.1 CDS CLB_2553 NC_009697.1 2673197 2674342 R identified by match to protein family HMM PF02754; hypothetical protein complement(2673197..2674342) Clostridium botulinum A str. ATCC 19397 5398127 YP_001384855.1 CDS CLB_2554 NC_009697.1 2674342 2675328 R hypothetical protein complement(2674342..2675328) Clostridium botulinum A str. ATCC 19397 5398098 YP_001384856.1 CDS CLB_2555 NC_009697.1 2675318 2676019 R hypothetical protein complement(2675318..2676019) Clostridium botulinum A str. ATCC 19397 5397195 YP_001384857.1 CDS CLB_2556 NC_009697.1 2676019 2676693 R identified by match to protein family HMM PF00535; glycosyl transferase family protein complement(2676019..2676693) Clostridium botulinum A str. ATCC 19397 5396427 YP_001384858.1 CDS CLB_2557 NC_009697.1 2676880 2677854 D identified by match to protein family HMM PF00581; thiosulfate sulfurtransferase 2676880..2677854 Clostridium botulinum A str. ATCC 19397 5397446 YP_001384859.1 CDS glpX NC_009697.1 2678088 2679062 R type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II complement(2678088..2679062) Clostridium botulinum A str. ATCC 19397 5394675 YP_001384860.1 CDS CLB_2559 NC_009697.1 2679546 2679722 D identified by Glimmer3; hypothetical protein 2679546..2679722 Clostridium botulinum A str. ATCC 19397 5394553 YP_001384861.1 CDS CLB_2560 NC_009697.1 2679754 2680152 R hypothetical protein complement(2679754..2680152) Clostridium botulinum A str. ATCC 19397 5394923 YP_001384862.1 CDS CLB_2561 NC_009697.1 2680607 2681776 R identified by match to protein family HMM PF00258; match to protein family HMM PF00753; metallo-beta-lactamase family protein/flavodoxin complement(2680607..2681776) Clostridium botulinum A str. ATCC 19397 5394647 YP_001384863.1 CDS CLB_2562 NC_009697.1 2682323 2682829 R hypothetical protein complement(2682323..2682829) Clostridium botulinum A str. ATCC 19397 5396372 YP_001384864.1 CDS CLB_2563 NC_009697.1 2683881 2684744 R identified by match to protein family HMM PF01156; IUNH family nucleoside hydrolase complement(2683881..2684744) Clostridium botulinum A str. ATCC 19397 5397510 YP_001384865.1 CDS def-3 NC_009697.1 2684762 2685298 R identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079; peptide deformylase complement(2684762..2685298) Clostridium botulinum A str. ATCC 19397 5397931 YP_001384866.1 CDS CLB_2565 NC_009697.1 2685515 2686165 R produces ATP from ADP in the presence of a proton gradient across the membrane; the D subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit D complement(2685515..2686165) Clostridium botulinum A str. ATCC 19397 5396108 YP_001384867.1 CDS CLB_2566 NC_009697.1 2686194 2687579 R produces ATP from ADP in the presence of a proton gradient across the membrane; the B subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit B complement(2686194..2687579) Clostridium botulinum A str. ATCC 19397 5396195 YP_001384868.1 CDS CLB_2567 NC_009697.1 2687572 2689350 R produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit A complement(2687572..2689350) Clostridium botulinum A str. ATCC 19397 5397711 YP_001384869.1 CDS CLB_2568 NC_009697.1 2689364 2689672 R produces ATP from ADP in the presence of a proton gradient across the membrane; the F subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit F complement(2689364..2689672) Clostridium botulinum A str. ATCC 19397 5396274 YP_001384870.1 CDS CLB_2569 NC_009697.1 2689665 2690666 R produces ATP from ADP in the presence of a proton gradient across the membrane; the C subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit C complement(2689665..2690666) Clostridium botulinum A str. ATCC 19397 5396466 YP_001384871.1 CDS CLB_2570 NC_009697.1 2690681 2691280 R identified by match to protein family HMM PF01991; V-type ATPase, E subunit complement(2690681..2691280) Clostridium botulinum A str. ATCC 19397 5397422 YP_001384872.1 CDS CLB_2571 NC_009697.1 2691319 2691795 R produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits; V-type ATP synthase subunit K complement(2691319..2691795) Clostridium botulinum A str. ATCC 19397 5397549 YP_001384873.1 CDS CLB_2572 NC_009697.1 2691808 2693769 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I is part of the membrane proton channel.; V-type ATP synthase subunit I complement(2691808..2693769) Clostridium botulinum A str. ATCC 19397 5395529 YP_001384874.1 CDS CLB_2573 NC_009697.1 2693756 2694082 R V-type ATPase, G subunit complement(2693756..2694082) Clostridium botulinum A str. ATCC 19397 5394812 YP_001384875.1 CDS CLB_2574 NC_009697.1 2694388 2696067 R identified by match to protein family HMM PF02310; match to protein family HMM PF04055; B12-binding Fe-S oxidoreductase complement(2694388..2696067) Clostridium botulinum A str. ATCC 19397 5395385 YP_001384876.1 CDS CLB_2575 NC_009697.1 2696042 2696617 R hypothetical protein complement(2696042..2696617) Clostridium botulinum A str. ATCC 19397 5396413 YP_001384877.1 CDS CLB_2576 NC_009697.1 2696789 2697508 R identified by match to protein family HMM PF00882; phospholipase C complement(2696789..2697508) Clostridium botulinum A str. ATCC 19397 5394788 YP_001384878.1 CDS CLB_2577 NC_009697.1 2697530 2698729 R hypothetical protein complement(2697530..2698729) Clostridium botulinum A str. ATCC 19397 5396498 YP_001384879.1 CDS CLB_2578 NC_009697.1 2698767 2701313 R identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; ATPase P complement(2698767..2701313) Clostridium botulinum A str. ATCC 19397 5396770 YP_001384880.1 CDS CLB_2579 NC_009697.1 2701632 2703275 D catalyzes the hydrolysis of pyrophosphate to phosphate; manganese-dependent inorganic pyrophosphatase 2701632..2703275 Clostridium botulinum A str. ATCC 19397 5395846 YP_001384881.1 CDS CLB_2580 NC_009697.1 2703491 2704069 R identified by Glimmer3; hypothetical protein complement(2703491..2704069) Clostridium botulinum A str. ATCC 19397 5397211 YP_001384882.1 CDS flgG NC_009697.1 2704397 2705188 R makes up the distal portion of the flagellar basal body rod; the Clostridia have 2 adjacent copies of the FlgG gene; flagellar basal body rod protein FlgG complement(2704397..2705188) Clostridium botulinum A str. ATCC 19397 5397450 YP_001384883.1 CDS flgG NC_009697.1 2705243 2706010 R makes up the distal portion of the flagellar basal body rod; the Clostridia have two adjacent copies of the FlgG gene; flagellar basal body rod protein FlgG complement(2705243..2706010) Clostridium botulinum A str. ATCC 19397 5397416 YP_001384884.1 CDS CLB_2583 NC_009697.1 2706076 2706192 R hypothetical protein complement(2706076..2706192) Clostridium botulinum A str. ATCC 19397 5394792 YP_001384885.1 CDS CLB_2584 NC_009697.1 2706270 2706908 R hypothetical protein complement(2706270..2706908) Clostridium botulinum A str. ATCC 19397 5394819 YP_001384886.1 CDS fliA NC_009697.1 2706937 2707665 R identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02479; match to protein family HMM TIGR02937; RNA polymerase sigma factor for flagellar operon FliA complement(2706937..2707665) Clostridium botulinum A str. ATCC 19397 5394616 YP_001384887.1 CDS CLB_2586 NC_009697.1 2707679 2708338 R identified by match to protein family HMM PF07238; hypothetical protein complement(2707679..2708338) Clostridium botulinum A str. ATCC 19397 5396472 YP_001384888.1 CDS flhG NC_009697.1 2708353 2709213 R identified by match to protein family HMM PF01656; flagellar biosynthesis protein FlhG complement(2708353..2709213) Clostridium botulinum A str. ATCC 19397 5395231 YP_001384889.1 CDS flhF NC_009697.1 2709207 2710433 R positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF complement(2709207..2710433) Clostridium botulinum A str. ATCC 19397 5394897 YP_001384890.1 CDS flhA NC_009697.1 2710430 2712496 R membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA complement(2710430..2712496) Clostridium botulinum A str. ATCC 19397 5396596 YP_001384891.1 CDS CLB_2590 NC_009697.1 2712524 2714353 R FlhB is a membrane protein responsible for substrate specificity in switching from rod/hook-type export to filament-type export; FliR is required for export of flagellar proteins, although a specific role has not yet been determined; bifunctional flagellar biosynthesis protein FliR/FlhB complement(2712524..2714353) Clostridium botulinum A str. ATCC 19397 5395552 YP_001384892.1 CDS fliQ NC_009697.1 2714387 2714656 R identified by match to protein family HMM PF01313; match to protein family HMM TIGR01402; flagellar biosynthesis protein FliQ complement(2714387..2714656) Clostridium botulinum A str. ATCC 19397 5397720 YP_001384893.1 CDS fliP NC_009697.1 2714668 2715444 R FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP complement(2714668..2715444) Clostridium botulinum A str. ATCC 19397 5396950 YP_001384894.1 CDS CLB_2593 NC_009697.1 2715428 2715835 R flagellar biosynthesis domain-containing protein complement(2715428..2715835) Clostridium botulinum A str. ATCC 19397 5397443 YP_001384895.1 CDS motB-2 NC_009697.1 2715908 2717170 R identified by match to protein family HMM PF00691; match to protein family HMM PF03748; chemotaxis motB protein complement(2715908..2717170) Clostridium botulinum A str. ATCC 19397 5396609 YP_001384896.1 CDS motA-2 NC_009697.1 2717163 2717975 R identified by match to protein family HMM PF01618; chemotaxis MotA protein complement(2717163..2717975) Clostridium botulinum A str. ATCC 19397 5395183 YP_001384897.1 CDS CLB_2596 NC_009697.1 2717972 2718181 R identified by match to protein family HMM PF06289; flagellar protein FlbD complement(2717972..2718181) Clostridium botulinum A str. ATCC 19397 5396105 YP_001384898.1 CDS flgE NC_009697.1 2718415 2719452 R identified by match to protein family HMM PF00460; match to protein family HMM PF06429; flagellar hook protein flgE complement(2718415..2719452) Clostridium botulinum A str. ATCC 19397 5395345 YP_001384899.1 CDS CLB_2598 NC_009697.1 2719534 2719953 R identified by match to protein family HMM TIGR02530; flagellar operon protein complement(2719534..2719953) Clostridium botulinum A str. ATCC 19397 5397812 YP_001384900.1 CDS flgD NC_009697.1 2719968 2720765 R identified by match to protein family HMM PF03963; flagellar hook capping protein complement(2719968..2720765) Clostridium botulinum A str. ATCC 19397 5395746 YP_001384901.1 CDS fliK NC_009697.1 2720795 2722183 R identified by match to protein family HMM PF02120; flagellar hook-length control protein complement(2720795..2722183) Clostridium botulinum A str. ATCC 19397 5395890 YP_001384902.1 CDS CLB_2601 NC_009697.1 2722189 2722626 R identified by match to protein family HMM TIGR02473; flagellar protein FliJ complement(2722189..2722626) Clostridium botulinum A str. ATCC 19397 5394661 YP_001384903.1 CDS fliI NC_009697.1 2722730 2724046 R identified by match to protein family HMM PF00006; match to protein family HMM PF02874; match to protein family HMM TIGR01026; match to protein family HMM TIGR02545; flagellar protein export ATPase FliI complement(2722730..2724046) Clostridium botulinum A str. ATCC 19397 5395467 YP_001384904.1 CDS fliH NC_009697.1 2724086 2724862 R flagellar assembly protein FliH complement(2724086..2724862) Clostridium botulinum A str. ATCC 19397 5397730 YP_001384905.1 CDS fliG NC_009697.1 2724846 2725859 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G complement(2724846..2725859) Clostridium botulinum A str. ATCC 19397 5397132 YP_001384906.1 CDS fliF NC_009697.1 2725866 2727446 R the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein complement(2725866..2727446) Clostridium botulinum A str. ATCC 19397 5394881 YP_001384907.1 CDS fliE NC_009697.1 2727462 2727776 R forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE complement(2727462..2727776) Clostridium botulinum A str. ATCC 19397 5395599 YP_001384908.1 CDS flgC NC_009697.1 2727788 2728222 R with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC complement(2727788..2728222) Clostridium botulinum A str. ATCC 19397 5395899 YP_001384909.1 CDS flgB NC_009697.1 2728320 2728721 R with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgB complement(2728320..2728721) Clostridium botulinum A str. ATCC 19397 5396742 YP_001384910.1 CDS CLB_2609 NC_009697.1 2729293 2730147 R identified by match to protein family HMM PF00669; match to protein family HMM PF00700; flagellin complement(2729293..2730147) Clostridium botulinum A str. ATCC 19397 5395871 YP_001384911.1 CDS CLB_2610 NC_009697.1 2730291 2730659 R hypothetical protein complement(2730291..2730659) Clostridium botulinum A str. ATCC 19397 5395601 YP_001384912.1 CDS argH NC_009697.1 2731199 2732521 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(2731199..2732521) Clostridium botulinum A str. ATCC 19397 5398113 YP_001384913.1 CDS argG NC_009697.1 2732543 2733736 R catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase complement(2732543..2733736) Clostridium botulinum A str. ATCC 19397 5395732 YP_001384914.1 CDS CLB_2613 NC_009697.1 2734031 2734369 R hypothetical protein complement(2734031..2734369) Clostridium botulinum A str. ATCC 19397 5395489 YP_001384915.1 CDS CLB_2614 NC_009697.1 2734392 2734736 R hypothetical protein complement(2734392..2734736) Clostridium botulinum A str. ATCC 19397 5396599 YP_001384916.1 CDS cls NC_009697.1 2734916 2736346 R identified by match to protein family HMM PF00614; cardiolipin synthetase complement(2734916..2736346) Clostridium botulinum A str. ATCC 19397 5397624 YP_001384917.1 CDS CLB_2616 NC_009697.1 2736672 2737562 D hypothetical protein 2736672..2737562 Clostridium botulinum A str. ATCC 19397 5394915 YP_001384918.1 CDS CLB_2617 NC_009697.1 2737737 2737922 R identified by Glimmer3; hypothetical protein complement(2737737..2737922) Clostridium botulinum A str. ATCC 19397 5397299 YP_001384919.1 CDS CLB_2618 NC_009697.1 2738205 2738654 R identified by match to protein family HMM PF04892; VanZ family protein complement(2738205..2738654) Clostridium botulinum A str. ATCC 19397 5394975 YP_001384920.1 CDS CLB_2619 NC_009697.1 2738905 2740335 R identified by match to protein family HMM PF01943; polysaccharide biosynthesis protein complement(2738905..2740335) Clostridium botulinum A str. ATCC 19397 5397185 YP_001384921.1 CDS CLB_2620 NC_009697.1 2740375 2741292 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD-dependent epimerase/dehydratase family protein complement(2740375..2741292) Clostridium botulinum A str. ATCC 19397 5397704 YP_001384922.1 CDS CLB_2621 NC_009697.1 2741321 2742388 R identified by match to protein family HMM PF03102; match to protein family HMM PF08666; neuB family protein complement(2741321..2742388) Clostridium botulinum A str. ATCC 19397 5395958 YP_001384923.1 CDS CLB_2622 NC_009697.1 2742420 2744081 R identified by match to protein family HMM PF02348; match to protein family HMM PF04101; cytidyltransferase-like protein complement(2742420..2744081) Clostridium botulinum A str. ATCC 19397 5394612 YP_001384924.1 CDS CLB_2623 NC_009697.1 2744096 2745265 R hypothetical protein complement(2744096..2745265) Clostridium botulinum A str. ATCC 19397 5397210 YP_001384925.1 CDS CLB_2624 NC_009697.1 2745299 2746252 R identified by match to protein family HMM PF05855; exopolysaccharide biosynthesis protein complement(2745299..2746252) Clostridium botulinum A str. ATCC 19397 5396456 YP_001384926.1 CDS CLB_2625 NC_009697.1 2746279 2747049 R exopolysaccharide biosynthesis protein complement(2746279..2747049) Clostridium botulinum A str. ATCC 19397 5396889 YP_001384927.1 CDS glf NC_009697.1 2747049 2748149 R identified by match to protein family HMM PF03275; match to protein family HMM TIGR00031; UDP-galactopyranose mutase complement(2747049..2748149) Clostridium botulinum A str. ATCC 19397 5396430 YP_001384928.1 CDS CLB_2627 NC_009697.1 2748254 2748931 R identified by match to protein family HMM PF02397; UDP-phosphate galactosephosphotransferase complement(2748254..2748931) Clostridium botulinum A str. ATCC 19397 5396566 YP_001384929.1 CDS CLB_2628 NC_009697.1 2749142 2749852 R identified by match to protein family HMM TIGR01007; capsular exopolysaccharide family protein complement(2749142..2749852) Clostridium botulinum A str. ATCC 19397 5395942 YP_001384930.1 CDS CLB_2629 NC_009697.1 2749871 2750644 R identified by match to protein family HMM PF02811; exopolysaccharide biosynthesis protein complement(2749871..2750644) Clostridium botulinum A str. ATCC 19397 5397158 YP_001384931.1 CDS CLB_2630 NC_009697.1 2750660 2751337 R identified by match to protein family HMM PF02706; capsular polysaccharide biosynthsis protein complement(2750660..2751337) Clostridium botulinum A str. ATCC 19397 5397840 YP_001384932.1 CDS CLB_2631 NC_009697.1 2751372 2752334 R identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350; cell envelope-related function transcriptional attenuator complement(2751372..2752334) Clostridium botulinum A str. ATCC 19397 5396177 YP_001384933.1 CDS CLB_2632 NC_009697.1 2752772 2752948 R hypothetical protein complement(2752772..2752948) Clostridium botulinum A str. ATCC 19397 5396545 YP_001384934.1 CDS CLB_2633 NC_009697.1 2753077 2753250 R identified by Glimmer3; hypothetical protein complement(2753077..2753250) Clostridium botulinum A str. ATCC 19397 5396705 YP_001384935.1 CDS CLB_2634 NC_009697.1 2753371 2753538 R hypothetical protein complement(2753371..2753538) Clostridium botulinum A str. ATCC 19397 5395027 YP_001384936.1 CDS CLB_2635 NC_009697.1 2754022 2754870 R identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein complement(2754022..2754870) Clostridium botulinum A str. ATCC 19397 5396451 YP_001384937.1 CDS fliC NC_009697.1 2754947 2755765 R identified by match to protein family HMM PF00669; match to protein family HMM PF00700; flagellin complement(2754947..2755765) Clostridium botulinum A str. ATCC 19397 5395513 YP_001384938.1 CDS CLB_2637 NC_009697.1 2755950 2756447 R hypothetical protein complement(2755950..2756447) Clostridium botulinum A str. ATCC 19397 5396439 YP_001384939.1 CDS CLB_2638 NC_009697.1 2756533 2758002 R hypothetical protein complement(2756533..2758002) Clostridium botulinum A str. ATCC 19397 5395892 YP_001384940.1 CDS CLB_2639 NC_009697.1 2758018 2758128 R identified by Glimmer3; hypothetical protein complement(2758018..2758128) Clostridium botulinum A str. ATCC 19397 5395081 YP_001384941.1 CDS CLB_2640 NC_009697.1 2758236 2759237 R glycosyl transferase-like protein complement(2758236..2759237) Clostridium botulinum A str. ATCC 19397 5398118 YP_001384942.1 CDS CLB_2641 NC_009697.1 2759734 2760738 R identified by match to protein family HMM PF00657; GDSL family lipase/acylhydrolase complement(2759734..2760738) Clostridium botulinum A str. ATCC 19397 5396853 YP_001384943.1 CDS CLB_2642 NC_009697.1 2760828 2761925 R hypothetical protein complement(2760828..2761925) Clostridium botulinum A str. ATCC 19397 5396631 YP_001384944.1 CDS CLB_2643 NC_009697.1 2761942 2763120 R identified by match to protein family HMM PF00515; match to protein family HMM PF00535; match to protein family HMM PF07719; glycosyl transferase family protein complement(2761942..2763120) Clostridium botulinum A str. ATCC 19397 5396126 YP_001384945.1 CDS CLB_2644 NC_009697.1 2763148 2764326 R identified by match to protein family HMM PF00534; glycoside hydrolase family protein complement(2763148..2764326) Clostridium botulinum A str. ATCC 19397 5394853 YP_001384946.1 CDS CLB_2645 NC_009697.1 2764431 2764958 R identified by Glimmer3; hypothetical protein complement(2764431..2764958) Clostridium botulinum A str. ATCC 19397 5396668 YP_001384947.1 CDS CLB_2646 NC_009697.1 2764966 2766186 R identified by match to protein family HMM PF00534; glycoside hydrolase family protein complement(2764966..2766186) Clostridium botulinum A str. ATCC 19397 5397485 YP_001384948.1 CDS CLB_2647 NC_009697.1 2766212 2768209 R asparagine synthetase complement(2766212..2768209) Clostridium botulinum A str. ATCC 19397 5396142 YP_001384949.1 CDS CLB_2648 NC_009697.1 2768246 2769667 R identified by Glimmer3; hypothetical protein complement(2768246..2769667) Clostridium botulinum A str. ATCC 19397 5397991 YP_001384950.1 CDS CLB_2649 NC_009697.1 2769713 2771152 R hypothetical protein complement(2769713..2771152) Clostridium botulinum A str. ATCC 19397 5397105 YP_001384951.1 CDS CLB_2650 NC_009697.1 2771286 2772308 R identified by match to protein family HMM PF08241; methyltransferase domain-containing protein complement(2771286..2772308) Clostridium botulinum A str. ATCC 19397 5396807 YP_001384952.1 CDS CLB_2651 NC_009697.1 2772301 2773506 R identified by match to protein family HMM PF00534; glycoside hydrolase family protein complement(2772301..2773506) Clostridium botulinum A str. ATCC 19397 5395003 YP_001384953.1 CDS CLB_2652 NC_009697.1 2773593 2774900 R identified by Glimmer3; hypothetical protein complement(2773593..2774900) Clostridium botulinum A str. ATCC 19397 5397010 YP_001384954.1 CDS CLB_2653 NC_009697.1 2774922 2775698 R identified by match to protein family HMM PF04989; cephalosporin hydroxylase family protein complement(2774922..2775698) Clostridium botulinum A str. ATCC 19397 5397457 YP_001384955.1 CDS CLB_2654 NC_009697.1 2775695 2776870 R identified by match to protein family HMM PF08241; hypothetical protein complement(2775695..2776870) Clostridium botulinum A str. ATCC 19397 5394859 YP_001384956.1 CDS CLB_2655 NC_009697.1 2776860 2777780 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; NAD-dependent epimerase/dehydratase family protein complement(2776860..2777780) Clostridium botulinum A str. ATCC 19397 5397989 YP_001384957.1 CDS rfbC NC_009697.1 2777777 2778310 R identified by match to protein family HMM PF00908; match to protein family HMM TIGR01221; dTDP-4-dehydrorhamnose 3,5-epimerase complement(2777777..2778310) Clostridium botulinum A str. ATCC 19397 5397628 YP_001384958.1 CDS CLB_2657 NC_009697.1 2778311 2779537 R identified by match to protein family HMM PF08242; match to protein family HMM PF08421; match to protein family HMM PF08484; methyltransferase-like protein complement(2778311..2779537) Clostridium botulinum A str. ATCC 19397 5397567 YP_001384959.1 CDS CLB_2658 NC_009697.1 2779593 2780696 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(2779593..2780696) Clostridium botulinum A str. ATCC 19397 5396957 YP_001384960.1 CDS CLB_2659 NC_009697.1 2780698 2781474 R identified by match to protein family HMM PF00483; match to protein family HMM TIGR02623; glucose-1-phosphate cytidylyltransferase complement(2780698..2781474) Clostridium botulinum A str. ATCC 19397 5395094 YP_001384961.1 CDS CLB_2660 NC_009697.1 2781493 2783904 R identified by Glimmer3; hypothetical protein complement(2781493..2783904) Clostridium botulinum A str. ATCC 19397 5396767 YP_001384962.1 CDS CLB_2661 NC_009697.1 2783995 2785047 R identified by match to protein family HMM PF03102; match to protein family HMM PF08666; NeuB family protein complement(2783995..2785047) Clostridium botulinum A str. ATCC 19397 5396170 YP_001384963.1 CDS CLB_2662 NC_009697.1 2785189 2785944 R identified by match to protein family HMM PF02348; polysaccharide biosynthesis protein complement(2785189..2785944) Clostridium botulinum A str. ATCC 19397 5394857 YP_001384964.1 CDS CLB_2663 NC_009697.1 2786067 2786738 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549; HAD family hydrolase complement(2786067..2786738) Clostridium botulinum A str. ATCC 19397 5396891 YP_001384965.1 CDS CLB_2664 NC_009697.1 2786778 2787806 R undetermined role; similar to CarB protein but much smaller; carbamoyl phosphate synthase-like protein complement(2786778..2787806) Clostridium botulinum A str. ATCC 19397 5397394 YP_001384966.1 CDS CLB_2665 NC_009697.1 2788027 2789091 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD-dependent epimerase/dehydratase family protein complement(2788027..2789091) Clostridium botulinum A str. ATCC 19397 5398173 YP_001384967.1 CDS CLB_2666 NC_009697.1 2789211 2790236 R identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; exopolysaccharide biosynthesis protein complement(2789211..2790236) Clostridium botulinum A str. ATCC 19397 5397359 YP_001384968.1 CDS CLB_2667 NC_009697.1 2790277 2791698 R identified by match to protein family HMM PF00515; match to protein family HMM PF00535; match to protein family HMM PF07719; glycosyl transferase family protein complement(2790277..2791698) Clostridium botulinum A str. ATCC 19397 5394636 YP_001384969.1 CDS CLB_2668 NC_009697.1 2791707 2792054 R identified by similarity to PIR:C97171; hypothetical protein complement(2791707..2792054) Clostridium botulinum A str. ATCC 19397 5395565 YP_001384970.1 CDS CLB_2669 NC_009697.1 2792058 2793761 R identified by match to protein family HMM PF01973; hypothetical protein complement(2792058..2793761) Clostridium botulinum A str. ATCC 19397 5397319 YP_001384971.1 CDS CLB_2670 NC_009697.1 2793786 2795687 R identified by match to protein family HMM PF00515; match to protein family HMM PF00535; glycosyl transferase family protein complement(2793786..2795687) Clostridium botulinum A str. ATCC 19397 5395662 YP_001384972.1 CDS CLB_2671 NC_009697.1 2795910 2796737 R identified by match to protein family HMM PF00669; match to protein family HMM PF00700; flagellin complement(2795910..2796737) Clostridium botulinum A str. ATCC 19397 5397630 YP_001384973.1 CDS CLB_2672 NC_009697.1 2796951 2797778 R identified by match to protein family HMM PF00669; match to protein family HMM PF00700; flagellin complement(2796951..2797778) Clostridium botulinum A str. ATCC 19397 5396700 YP_001384974.1 CDS CLB_2673 NC_009697.1 2797928 2798269 R hypothetical protein complement(2797928..2798269) Clostridium botulinum A str. ATCC 19397 5395406 YP_001384975.1 CDS fliD NC_009697.1 2798296 2800731 R identified by match to protein family HMM PF02465; match to protein family HMM PF07195; flagellar hook-associated protein 2 complement(2798296..2800731) Clostridium botulinum A str. ATCC 19397 5396440 YP_001384976.1 CDS fliS NC_009697.1 2800785 2801174 R identified by match to protein family HMM PF02561; match to protein family HMM TIGR00208; flagellar protein FliS complement(2800785..2801174) Clostridium botulinum A str. ATCC 19397 5397282 YP_001384977.1 CDS CLB_2676 NC_009697.1 2801211 2801510 R hypothetical protein complement(2801211..2801510) Clostridium botulinum A str. ATCC 19397 5396312 YP_001384978.1 CDS CLB_2677 NC_009697.1 2801565 2801921 R identified by match to protein family HMM PF03646; flagellar protein FlaG complement(2801565..2801921) Clostridium botulinum A str. ATCC 19397 5397198 YP_001384979.1 CDS csrA NC_009697.1 2801937 2802155 R affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator complement(2801937..2802155) Clostridium botulinum A str. ATCC 19397 5396436 YP_001384980.1 CDS CLB_2679 NC_009697.1 2802155 2802586 R binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW complement(2802155..2802586) Clostridium botulinum A str. ATCC 19397 5395729 YP_001384981.1 CDS flgL NC_009697.1 2802675 2803637 R identified by match to protein family HMM PF00669; match to protein family HMM TIGR02550; flagellar hook-associated protein 3 complement(2802675..2803637) Clostridium botulinum A str. ATCC 19397 5396995 YP_001384982.1 CDS flgK NC_009697.1 2803655 2805523 R identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM TIGR02492; flagellar hook-associated protein FlgK complement(2803655..2805523) Clostridium botulinum A str. ATCC 19397 5397571 YP_001384983.1 CDS CLB_2682 NC_009697.1 2805812 2806216 R identified by match to protein family HMM PF05130; flgN family protein complement(2805812..2806216) Clostridium botulinum A str. ATCC 19397 5395977 YP_001384984.1 CDS CLB_2683 NC_009697.1 2806216 2806497 R identified by match to protein family HMM PF04316; regulator of flagellin synthesis FlgM complement(2806216..2806497) Clostridium botulinum A str. ATCC 19397 5395955 YP_001384985.1 CDS fliN NC_009697.1 2806994 2808154 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein complement(2806994..2808154) Clostridium botulinum A str. ATCC 19397 5395384 YP_001384986.1 CDS fliM NC_009697.1 2808147 2809142 R identified by match to protein family HMM PF01052; match to protein family HMM PF02154; match to protein family HMM TIGR01397; flagellar motor switch protein FliM complement(2808147..2809142) Clostridium botulinum A str. ATCC 19397 5396079 YP_001384987.1 CDS CLB_2686 NC_009697.1 2809170 2809565 R identified by match to protein family HMM PF01584; chemotaxis protein CheW complement(2809170..2809565) Clostridium botulinum A str. ATCC 19397 5397986 YP_001384988.1 CDS cheY NC_009697.1 2809665 2810024 R identified by match to protein family HMM PF00072; chemotaxis protein CheY complement(2809665..2810024) Clostridium botulinum A str. ATCC 19397 5395009 YP_001384989.1 CDS cheC NC_009697.1 2810052 2810651 R identified by match to protein family HMM PF04509; chemotaxis protein CheC complement(2810052..2810651) Clostridium botulinum A str. ATCC 19397 5397725 YP_001384990.1 CDS cheA NC_009697.1 2810677 2812752 R identified by match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895; match to protein family HMM PF07194; chemotaxis protein CheA complement(2810677..2812752) Clostridium botulinum A str. ATCC 19397 5397726 YP_001384991.1 CDS cheR NC_009697.1 2812765 2813535 R identified by match to protein family HMM PF01739; match to protein family HMM PF03705; chemotaxis protein methyltransferase CheR complement(2812765..2813535) Clostridium botulinum A str. ATCC 19397 5396634 YP_001384992.1 CDS cheB NC_009697.1 2813550 2814614 R identified by match to protein family HMM PF00072; match to protein family HMM PF01339; protein-glutamate methylesterase CheB complement(2813550..2814614) Clostridium botulinum A str. ATCC 19397 5394959 YP_001384993.1 CDS cheD NC_009697.1 2814637 2815125 R catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD complement(2814637..2815125) Clostridium botulinum A str. ATCC 19397 5397206 YP_001384994.1 CDS cheW NC_009697.1 2815142 2815588 R identified by match to protein family HMM PF01584; chemotaxis protein CheW complement(2815142..2815588) Clostridium botulinum A str. ATCC 19397 5394614 YP_001384995.1 CDS CLB_2694 NC_009697.1 2815604 2817637 R identified by match to protein family HMM PF03961; hypothetical protein complement(2815604..2817637) Clostridium botulinum A str. ATCC 19397 5396996 YP_001384996.1 CDS CLB_2695 NC_009697.1 2817890 2819845 R identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830; PTS system glucose family transporter subunit IIABC complement(2817890..2819845) Clostridium botulinum A str. ATCC 19397 5397229 YP_001384997.1 CDS CLB_2696 NC_009697.1 2819928 2820755 R identified by match to protein family HMM PF00874; match to protein family HMM PF03123; BglG family transcriptional antiterminator complement(2819928..2820755) Clostridium botulinum A str. ATCC 19397 5397974 YP_001384998.1 CDS CLB_2697 NC_009697.1 2821004 2821837 R identified by match to protein family HMM PF01063; branched-chain amino acid aminotransferase complement(2821004..2821837) Clostridium botulinum A str. ATCC 19397 5394724 YP_001384999.1 CDS CLB_2698 NC_009697.1 2821964 2822605 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490; HAD family hydrolase complement(2821964..2822605) Clostridium botulinum A str. ATCC 19397 5397554 YP_001385000.1 CDS CLB_2699 NC_009697.1 2822862 2823263 R hypothetical protein complement(2822862..2823263) Clostridium botulinum A str. ATCC 19397 5396336 YP_001385001.1 CDS CLB_2700 NC_009697.1 2823524 2823640 R identified by Glimmer3; hypothetical protein complement(2823524..2823640) Clostridium botulinum A str. ATCC 19397 5394974 YP_001385002.1 CDS CLB_2701 NC_009697.1 2823906 2827484 R identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176; pyruvate ferredoxin oxidoreductase complement(2823906..2827484) Clostridium botulinum A str. ATCC 19397 5397869 YP_001385003.1 CDS murG NC_009697.1 2828114 2829178 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(2828114..2829178) Clostridium botulinum A str. ATCC 19397 5395928 YP_001385004.1 CDS CLB_2703 NC_009697.1 2829517 2829666 D identified by Glimmer3; hypothetical protein 2829517..2829666 Clostridium botulinum A str. ATCC 19397 5394966 YP_001385005.1 CDS CLB_2704 NC_009697.1 2829780 2831888 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensory box histidine kinase complement(2829780..2831888) Clostridium botulinum A str. ATCC 19397 5396597 YP_001385006.1 CDS recJ NC_009697.1 2832011 2833792 R identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644; single-stranded-DNA-specific exonuclease RecJ complement(2832011..2833792) Clostridium botulinum A str. ATCC 19397 5396303 YP_001385007.1 CDS CLB_2706 NC_009697.1 2833983 2834801 D identified by match to protein family HMM PF01261; AP endonuclease 2833983..2834801 Clostridium botulinum A str. ATCC 19397 5396261 YP_001385008.1 CDS CLB_2707 NC_009697.1 2835091 2836494 R identified by match to protein family HMM PF01436; NHL repeat-containing protein complement(2835091..2836494) Clostridium botulinum A str. ATCC 19397 5398038 YP_001385009.1 CDS CLB_2708 NC_009697.1 2837489 2838697 R identified by match to protein family HMM PF00675; match to protein family HMM PF05193; M16 family peptidase complement(2837489..2838697) Clostridium botulinum A str. ATCC 19397 5397336 YP_001385010.1 CDS CLB_2709 NC_009697.1 2839086 2839496 D hypothetical protein 2839086..2839496 Clostridium botulinum A str. ATCC 19397 5395014 YP_001385011.1 CDS CLB_2710 NC_009697.1 2839564 2840115 D identified by match to protein family HMM PF01965; match to protein family HMM TIGR01383; DJ-1 family protein 2839564..2840115 Clostridium botulinum A str. ATCC 19397 5395566 YP_001385012.1 CDS glpP NC_009697.1 2840518 2841081 R identified by match to protein family HMM PF04309; glycerol uptake operon antiterminator regulatory protein complement(2840518..2841081) Clostridium botulinum A str. ATCC 19397 5396237 YP_001385013.1 CDS CLB_2712 NC_009697.1 2841130 2844000 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A complement(2841130..2844000) Clostridium botulinum A str. ATCC 19397 5397824 YP_001385014.1 CDS CLB_2713 NC_009697.1 2844074 2846029 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B complement(2844074..2846029) Clostridium botulinum A str. ATCC 19397 5397157 YP_001385015.1 CDS CLB_2714 NC_009697.1 2846396 2846773 R hypothetical protein complement(2846396..2846773) Clostridium botulinum A str. ATCC 19397 5396488 YP_001385016.1 CDS CLB_2715 NC_009697.1 2846960 2848132 D identified by match to protein family HMM PF00999; monovalent cation:proton antiporter-2 (CPA2) family protein 2846960..2848132 Clostridium botulinum A str. ATCC 19397 5397583 YP_001385017.1 CDS CLB_2716 NC_009697.1 2848145 2848495 D hypothetical protein 2848145..2848495 Clostridium botulinum A str. ATCC 19397 5396581 YP_001385018.1 CDS CLB_2717 NC_009697.1 2848956 2849192 D identified by Glimmer3; hypothetical protein 2848956..2849192 Clostridium botulinum A str. ATCC 19397 5396728 YP_001385019.1 CDS CLB_2718 NC_009697.1 2849212 2850105 D identified by match to protein family HMM PF01522; polysaccharide deacetylase 2849212..2850105 Clostridium botulinum A str. ATCC 19397 5396605 YP_001385020.1 CDS CLB_2719 NC_009697.1 2850184 2851473 R identified by Glimmer3; hypothetical protein complement(2850184..2851473) Clostridium botulinum A str. ATCC 19397 5396352 YP_001385021.1 CDS galE NC_009697.1 2851511 2852491 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; UDP-glucose 4-epimerase complement(2851511..2852491) Clostridium botulinum A str. ATCC 19397 5395621 YP_001385022.1 CDS CLB_2721 NC_009697.1 2852838 2853254 R identified by match to protein family HMM PF00258; match to protein family HMM TIGR01753; flavodoxin complement(2852838..2853254) Clostridium botulinum A str. ATCC 19397 5395804 YP_001385023.1 CDS CLB_2722 NC_009697.1 2853538 2853663 R identified by Glimmer3; hypothetical protein complement(2853538..2853663) Clostridium botulinum A str. ATCC 19397 5394635 YP_001385024.1 CDS CLB_2723 NC_009697.1 2853642 2854349 R identified by Glimmer3; hypothetical protein complement(2853642..2854349) Clostridium botulinum A str. ATCC 19397 5395667 YP_001385025.1 CDS CLB_2724 NC_009697.1 2854621 2856042 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein complement(2854621..2856042) Clostridium botulinum A str. ATCC 19397 5397431 YP_001385026.1 CDS CLB_2725 NC_009697.1 2856666 2858732 R identified by match to protein family HMM PF00165; match to protein family HMM PF07883; AraC family transcriptional regulator complement(2856666..2858732) Clostridium botulinum A str. ATCC 19397 5397649 YP_001385027.1 CDS CLB_2726 NC_009697.1 2859131 2860168 D identified by match to protein family HMM PF02016; LD-carboxypeptidase family protein 2859131..2860168 Clostridium botulinum A str. ATCC 19397 5395540 YP_001385028.1 CDS glpK NC_009697.1 2860683 2862179 R identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01311; glycerol kinase complement(2860683..2862179) Clostridium botulinum A str. ATCC 19397 5395946 YP_001385029.1 CDS CLB_2728 NC_009697.1 2862443 2863147 R identified by match to protein family HMM PF00230; match to protein family HMM TIGR00861; glycerol uptake facilitator protein complement(2862443..2863147) Clostridium botulinum A str. ATCC 19397 5396523 YP_001385030.1 CDS CLB_2729 NC_009697.1 2863681 2864001 D identified by match to protein family HMM PF01906; hypothetical protein 2863681..2864001 Clostridium botulinum A str. ATCC 19397 5396624 YP_001385031.1 CDS CLB_2730 NC_009697.1 2864112 2864810 R identified by match to protein family HMM PF04892; VanZ family membrane protein complement(2864112..2864810) Clostridium botulinum A str. ATCC 19397 5396286 YP_001385032.1 CDS CLB_2731 NC_009697.1 2864942 2866018 R ABC transporter permease complement(2864942..2866018) Clostridium botulinum A str. ATCC 19397 5395688 YP_001385033.1 CDS CLB_2732 NC_009697.1 2866002 2866898 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2866002..2866898) Clostridium botulinum A str. ATCC 19397 5396683 YP_001385034.1 CDS CLB_2733 NC_009697.1 2866904 2867284 R identified by match to protein family HMM PF00392; GntR family transcriptional regulator complement(2866904..2867284) Clostridium botulinum A str. ATCC 19397 5397971 YP_001385035.1 CDS CLB_2734 NC_009697.1 2867458 2867973 R identified by match to protein family HMM PF04892; VanZ family membrane protein complement(2867458..2867973) Clostridium botulinum A str. ATCC 19397 5396029 YP_001385036.1 CDS CLB_2735 NC_009697.1 2868406 2870118 D catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 2868406..2870118 Clostridium botulinum A str. ATCC 19397 5397907 YP_001385037.1 CDS CLB_2736 NC_009697.1 2870866 2871456 D membrane-spanning protein 2870866..2871456 Clostridium botulinum A str. ATCC 19397 5397691 YP_001385038.1 CDS CLB_2737 NC_009697.1 2871760 2872992 D identified by match to protein family HMM PF02073; aminopeptidase 2871760..2872992 Clostridium botulinum A str. ATCC 19397 5396481 YP_001385039.1 CDS gerAC NC_009697.1 2873180 2874325 R identified by match to protein family HMM PF05504; spore germination protein complement(2873180..2874325) Clostridium botulinum A str. ATCC 19397 5397138 YP_001385040.1 CDS CLB_2739 NC_009697.1 2874279 2875412 R identified by match to protein family HMM PF03845; match to protein family HMM TIGR00912; spore germination protein complement(2874279..2875412) Clostridium botulinum A str. ATCC 19397 5394719 YP_001385041.1 CDS gerAA NC_009697.1 2875402 2876889 R identified by match to protein family HMM PF03323; spore germination protein complement(2875402..2876889) Clostridium botulinum A str. ATCC 19397 5398206 YP_001385042.1 CDS CLB_2741 NC_009697.1 2877149 2877358 R identified by Glimmer3; hypothetical protein complement(2877149..2877358) Clostridium botulinum A str. ATCC 19397 5398133 YP_001385043.1 CDS CLB_2742 NC_009697.1 2877583 2877702 R identified by Glimmer3; hypothetical protein complement(2877583..2877702) Clostridium botulinum A str. ATCC 19397 5395778 YP_001385044.1 CDS CLB_2743 NC_009697.1 2877704 2878558 R with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS complement(2877704..2878558) Clostridium botulinum A str. ATCC 19397 5395127 YP_001385045.1 CDS CLB_2744 NC_009697.1 2878917 2879648 R identified by match to protein family HMM PF01522; polysaccharide deacetylase complement(2878917..2879648) Clostridium botulinum A str. ATCC 19397 5395313 YP_001385046.1 CDS CLB_2745 NC_009697.1 2879868 2881442 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; DEAD/DEAH box helicase complement(2879868..2881442) Clostridium botulinum A str. ATCC 19397 5394839 YP_001385047.1 CDS CLB_2746 NC_009697.1 2881519 2881686 R hypothetical protein complement(2881519..2881686) Clostridium botulinum A str. ATCC 19397 5398131 YP_001385048.1 CDS CLB_2747 NC_009697.1 2882120 2882545 D identified by Glimmer3; hypothetical protein 2882120..2882545 Clostridium botulinum A str. ATCC 19397 5397338 YP_001385049.1 CDS CLB_2748 NC_009697.1 2882634 2884328 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein complement(2882634..2884328) Clostridium botulinum A str. ATCC 19397 5396934 YP_001385050.1 CDS CLB_2749 NC_009697.1 2884525 2884935 R identified by match to protein family HMM PF00582; universal stress protein family protein complement(2884525..2884935) Clostridium botulinum A str. ATCC 19397 5396826 YP_001385051.1 CDS CLB_2750 NC_009697.1 2885568 2886209 D identified by match to protein family HMM PF00037; (Fe-S)-binding protein 2885568..2886209 Clostridium botulinum A str. ATCC 19397 5395849 YP_001385052.1 CDS CLB_2751 NC_009697.1 2886469 2887386 R catalyzes the formation of glutamate from glutamine; glutaminase complement(2886469..2887386) Clostridium botulinum A str. ATCC 19397 5396651 YP_001385053.1 CDS CLB_2752 NC_009697.1 2887777 2888802 R identified by match to protein family HMM PF06725; hypothetical protein complement(2887777..2888802) Clostridium botulinum A str. ATCC 19397 5395220 YP_001385054.1 CDS CLB_2753 NC_009697.1 2889069 2889353 R lipoprotein complement(2889069..2889353) Clostridium botulinum A str. ATCC 19397 5394967 YP_001385055.1 CDS CLB_2754 NC_009697.1 2889486 2891546 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein complement(2889486..2891546) Clostridium botulinum A str. ATCC 19397 5395168 YP_001385056.1 CDS CLB_2755 NC_009697.1 2892063 2892863 R hypothetical protein complement(2892063..2892863) Clostridium botulinum A str. ATCC 19397 5394912 YP_001385057.1 CDS nrdB NC_009697.1 2893207 2894235 R identified by match to protein family HMM PF00268; ribonucleoside-diphosphate reductase subunit beta complement(2893207..2894235) Clostridium botulinum A str. ATCC 19397 5397940 YP_001385058.1 CDS nrdA NC_009697.1 2894431 2896722 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(2894431..2896722) Clostridium botulinum A str. ATCC 19397 5395541 YP_001385059.1 CDS CLB_2758 NC_009697.1 2896952 2897428 R hypothetical protein complement(2896952..2897428) Clostridium botulinum A str. ATCC 19397 5394555 YP_001385060.1 CDS CLB_2759 NC_009697.1 2898081 2899202 D hypothetical protein 2898081..2899202 Clostridium botulinum A str. ATCC 19397 5397619 YP_001385061.1 CDS CLB_2760 NC_009697.1 2899439 2900290 D hypothetical protein 2899439..2900290 Clostridium botulinum A str. ATCC 19397 5397779 YP_001385062.1 CDS dinB NC_009697.1 2900450 2901499 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(2900450..2901499) Clostridium botulinum A str. ATCC 19397 5394650 YP_001385063.1 CDS CLB_2762 NC_009697.1 2901964 2903199 R catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines; dihydropyrimidine dehydrogenase complement(2901964..2903199) Clostridium botulinum A str. ATCC 19397 5396283 YP_001385064.1 CDS CLB_2763 NC_009697.1 2903199 2904515 R identified by match to protein family HMM PF00070; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase family protein complement(2903199..2904515) Clostridium botulinum A str. ATCC 19397 5395140 YP_001385065.1 CDS pyrR-2 NC_009697.1 2904962 2905510 R identified by match to protein family HMM PF00156; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase complement(2904962..2905510) Clostridium botulinum A str. ATCC 19397 5398155 YP_001385066.1 CDS CLB_2765 NC_009697.1 2905839 2906894 R identified by match to protein family HMM PF02698; hypothetical protein complement(2905839..2906894) Clostridium botulinum A str. ATCC 19397 5394535 YP_001385067.1 CDS CLB_2766 NC_009697.1 2907324 2907743 R identified by match to protein family HMM PF01047; match to protein family HMM PF03965; MarR family transcriptional regulator complement(2907324..2907743) Clostridium botulinum A str. ATCC 19397 5397732 YP_001385068.1 CDS CLB_2767 NC_009697.1 2907761 2910019 R identified by match to protein family HMM PF00005; excinuclease ABC subunit A complement(2907761..2910019) Clostridium botulinum A str. ATCC 19397 5395174 YP_001385069.1 CDS CLB_2768 NC_009697.1 2910563 2910871 D hypothetical protein 2910563..2910871 Clostridium botulinum A str. ATCC 19397 5396241 YP_001385070.1 CDS ligT NC_009697.1 2910982 2911509 R identified by match to protein family HMM PF02834; match to protein family HMM TIGR02258; 2'-5' RNA ligase complement(2910982..2911509) Clostridium botulinum A str. ATCC 19397 5397595 YP_001385071.1 CDS CLB_2770 NC_009697.1 2911694 2912092 R identified by Glimmer3; hypothetical protein complement(2911694..2912092) Clostridium botulinum A str. ATCC 19397 5395917 YP_001385072.1 CDS CLB_2771 NC_009697.1 2912332 2914044 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein complement(2912332..2914044) Clostridium botulinum A str. ATCC 19397 5397353 YP_001385073.1 CDS CLB_2773 NC_009697.1 2914756 2915193 R identified by match to protein family HMM PF00293; MutT/nudix family protein complement(2914756..2915193) Clostridium botulinum A str. ATCC 19397 5394952 YP_001385074.1 CDS CLB_2774 NC_009697.1 2915733 2916200 D identified by match to protein family HMM PF01475; FUR family transcriptional regulator 2915733..2916200 Clostridium botulinum A str. ATCC 19397 5396038 YP_001385075.1 CDS CLB_2775 NC_009697.1 2916333 2918330 D identified by Glimmer3; hypothetical protein 2916333..2918330 Clostridium botulinum A str. ATCC 19397 5395399 YP_001385076.1 CDS CLB_2776 NC_009697.1 2918417 2920636 R identified by match to protein family HMM PF00704; glycosyl hydrolase family protein complement(2918417..2920636) Clostridium botulinum A str. ATCC 19397 5397399 YP_001385077.1 CDS nagB NC_009697.1 2920864 2921598 R catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase complement(2920864..2921598) Clostridium botulinum A str. ATCC 19397 5397700 YP_001385078.1 CDS nagA NC_009697.1 2921666 2922802 R identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR00221; N-acetylglucosamine-6-phosphate deacetylase complement(2921666..2922802) Clostridium botulinum A str. ATCC 19397 5398208 YP_001385079.1 CDS CLB_2779 NC_009697.1 2922963 2923697 R identified by match to protein family HMM PF00392; match to protein family HMM PF07702; GntR family transcriptional regulator complement(2922963..2923697) Clostridium botulinum A str. ATCC 19397 5396231 YP_001385080.1 CDS CLB_2780 NC_009697.1 2923992 2924849 D identified by match to protein family HMM PF00874; match to protein family HMM PF03123; BglG family transcriptional antiterminator 2923992..2924849 Clostridium botulinum A str. ATCC 19397 5398033 YP_001385081.1 CDS ptbA NC_009697.1 2925067 2925546 R identified by match to protein family HMM PF00358; match to protein family HMM TIGR00830; PTS system glucose subfamily transporter subunit IIA complement(2925067..2925546) Clostridium botulinum A str. ATCC 19397 5394759 YP_001385082.1 CDS nagE NC_009697.1 2926293 2927735 D identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR01998; PTS system N-acetylglucosamine-specific transporter subunit IIBC 2926293..2927735 Clostridium botulinum A str. ATCC 19397 5395196 YP_001385083.1 CDS CLB_2783 NC_009697.1 2928215 2929585 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 2928215..2929585 Clostridium botulinum A str. ATCC 19397 5397987 YP_001385084.1 CDS CLB_2784 NC_009697.1 2929750 2931144 R identified by match to protein family HMM PF01554; match to protein family HMM PF01943; match to protein family HMM TIGR00797; MATE efflux family protein complement(2929750..2931144) Clostridium botulinum A str. ATCC 19397 5397117 YP_001385085.1 CDS CLB_2785 NC_009697.1 2931378 2932577 R identified by match to protein family HMM PF00258; match to protein family HMM PF00753; metallo-beta-lactamase family protein/flavodoxin complement(2931378..2932577) Clostridium botulinum A str. ATCC 19397 5396501 YP_001385086.1 CDS CLB_2786 NC_009697.1 2932636 2934543 R identified by match to protein family HMM PF00301; match to protein family HMM PF00441; match to protein family HMM PF00766; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(2932636..2934543) Clostridium botulinum A str. ATCC 19397 5394655 YP_001385087.1 CDS CLB_2787 NC_009697.1 2934899 2935516 R identified by match to protein family HMM PF00665; transposase complement(2934899..2935516) Clostridium botulinum A str. ATCC 19397 5396462 YP_001385088.1 CDS CLB_2788 NC_009697.1 2935432 2936421 D identified by match to protein family HMM PF03613; PTS system mannose/fructose/sorbose family transporter subunit IID 2935432..2936421 Clostridium botulinum A str. ATCC 19397 5397209 YP_001385089.1 CDS CLB_2789 NC_009697.1 2936592 2937002 D identified by match to protein family HMM PF06115; hypothetical protein 2936592..2937002 Clostridium botulinum A str. ATCC 19397 5395062 YP_001385090.1 CDS CLB_2790 NC_009697.1 2937540 2938256 D identified by match to protein family HMM PF01144; match to protein family HMM TIGR02429; CoA-transferase subunit A 2937540..2938256 Clostridium botulinum A str. ATCC 19397 5395443 YP_001385091.1 CDS CLB_2791 NC_009697.1 2938265 2938921 D identified by match to protein family HMM PF01144; match to protein family HMM TIGR02428; CoA-transferase subunit B 2938265..2938921 Clostridium botulinum A str. ATCC 19397 5396129 YP_001385092.1 CDS CLB_2792 NC_009697.1 2939503 2940072 R hypothetical protein complement(2939503..2940072) Clostridium botulinum A str. ATCC 19397 5396531 YP_001385093.1 CDS CLB_2793 NC_009697.1 2940291 2940779 R identified by match to protein family HMM PF00111; match to protein family HMM PF01799; xanthine dehydrogenase family protein, iron-sulfur binding protein complement(2940291..2940779) Clostridium botulinum A str. ATCC 19397 5394551 YP_001385094.1 CDS CLB_2794 NC_009697.1 2940784 2941614 R identified by match to protein family HMM PF00941; xanthine dehydrogenase family protein, FAD-binding subunit complement(2940784..2941614) Clostridium botulinum A str. ATCC 19397 5397686 YP_001385095.1 CDS CLB_2795 NC_009697.1 2941611 2943941 R identified by match to protein family HMM PF01315; match to protein family HMM PF02738; xanthine dehydrogenase family protein, molybdopterin-binding subunit complement(2941611..2943941) Clostridium botulinum A str. ATCC 19397 5394604 YP_001385097.1 CDS CLB_2797 NC_009697.1 2945003 2946220 R identified by match to protein family HMM PF00999; monovalent cation:proton antiporter-2 (CPA2) family protein complement(2945003..2946220) Clostridium botulinum A str. ATCC 19397 5396652 YP_001385098.1 CDS CLB_2799 NC_009697.1 2947338 2948009 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; HAD family hydrolase complement(2947338..2948009) Clostridium botulinum A str. ATCC 19397 5397897 YP_001385099.1 CDS CLB_2800 NC_009697.1 2948429 2948575 R identified by Glimmer3; hypothetical protein complement(2948429..2948575) Clostridium botulinum A str. ATCC 19397 5396182 YP_001385100.1 CDS CLB_2801 NC_009697.1 2948904 2949938 R identified by match to protein family HMM PF04055; match to protein family HMM TIGR00048; chloramphenicol/florfenicol resistance protein complement(2948904..2949938) Clostridium botulinum A str. ATCC 19397 5398193 YP_001385101.1 CDS CLB_2802 NC_009697.1 2950101 2951579 R identified by match to protein family HMM PF00005; drug resistance ABC transporter ATP-binding protein complement(2950101..2951579) Clostridium botulinum A str. ATCC 19397 5397291 YP_001385102.1 CDS CLB_2803 NC_009697.1 2952606 2955119 R identified by match to protein family HMM PF02463; RecF/RecN/SMC domain-containing protein complement(2952606..2955119) Clostridium botulinum A str. ATCC 19397 5394709 YP_001385103.1 CDS CLB_2804 NC_009697.1 2955124 2955651 R identified by similarity to GB:AAS43498.1; hypothetical protein complement(2955124..2955651) Clostridium botulinum A str. ATCC 19397 5397935 YP_001385104.1 CDS CLB_2805 NC_009697.1 2955632 2957215 R identified by Glimmer3; hypothetical protein complement(2955632..2957215) Clostridium botulinum A str. ATCC 19397 5397842 YP_001385105.1 CDS CLB_2806 NC_009697.1 2958101 2958271 R identified by Glimmer3; hypothetical protein complement(2958101..2958271) Clostridium botulinum A str. ATCC 19397 5395689 YP_001385106.1 CDS CLB_2807 NC_009697.1 2958343 2958636 R identified by Glimmer3; hypothetical protein complement(2958343..2958636) Clostridium botulinum A str. ATCC 19397 5396404 YP_001385107.1 CDS CLB_2808 NC_009697.1 2958980 2959096 D identified by Glimmer3; hypothetical protein 2958980..2959096 Clostridium botulinum A str. ATCC 19397 5396967 YP_001385108.1 CDS CLB_2809 NC_009697.1 2959244 2959390 R identified by Glimmer3; hypothetical protein complement(2959244..2959390) Clostridium botulinum A str. ATCC 19397 5395210 YP_001385109.1 CDS CLB_2810 NC_009697.1 2961200 2962753 R identified by Glimmer3; hypothetical protein complement(2961200..2962753) Clostridium botulinum A str. ATCC 19397 5396240 YP_001385110.1 CDS CLB_2811 NC_009697.1 2962770 2963822 R identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675; DNA-cytosine methyltransferase family protein complement(2962770..2963822) Clostridium botulinum A str. ATCC 19397 5396333 YP_001385111.1 CDS CLB_2812 NC_009697.1 2963842 2964051 R identified by similarity to GB:BAD50088.1; hypothetical protein complement(2963842..2964051) Clostridium botulinum A str. ATCC 19397 5397160 YP_001385112.1 CDS CLB_2813 NC_009697.1 2964481 2965191 R identified by match to protein family HMM PF01471; match to protein family HMM PF01510; N-acetylmuramoyl-L-alanine amidase complement(2964481..2965191) Clostridium botulinum A str. ATCC 19397 5397279 YP_001385113.1 CDS CLB_2814 NC_009697.1 2965334 2965561 R hypothetical protein complement(2965334..2965561) Clostridium botulinum A str. ATCC 19397 5396521 YP_001385114.1 CDS CLB_2815 NC_009697.1 2965582 2965803 R hypothetical protein complement(2965582..2965803) Clostridium botulinum A str. ATCC 19397 5396471 YP_001385115.1 CDS CLB_2816 NC_009697.1 2965933 2966067 R identified by similarity to GB:BAC57539.1; hypothetical protein complement(2965933..2966067) Clostridium botulinum A str. ATCC 19397 5396298 YP_001385116.1 CDS CLB_2817 NC_009697.1 2966169 2966699 R identified by match to protein family HMM TIGR02937; sigma-70 family RNA polymerase sigma factor complement(2966169..2966699) Clostridium botulinum A str. ATCC 19397 5395271 YP_001385117.1 CDS CLB_2818 NC_009697.1 2967113 2967619 D identified by Glimmer3; hypothetical protein 2967113..2967619 Clostridium botulinum A str. ATCC 19397 5398011 YP_001385118.1 CDS CLB_2819 NC_009697.1 2967824 2968702 R identified by match to protein family HMM TIGR01446; DnaA domain-containing protein complement(2967824..2968702) Clostridium botulinum A str. ATCC 19397 5397163 YP_001385119.1 CDS CLB_2820 NC_009697.1 2968779 2969018 R identified by Glimmer3; hypothetical protein complement(2968779..2969018) Clostridium botulinum A str. ATCC 19397 5395644 YP_001385120.1 CDS CLB_2821 NC_009697.1 2969025 2969234 R identified by match to protein family HMM TIGR01764; excisionase family DNA-binding protein complement(2969025..2969234) Clostridium botulinum A str. ATCC 19397 5397631 YP_001385121.1 CDS CLB_2822 NC_009697.1 2969299 2969520 R identified by similarity to GB:CAJ70012.1; hypothetical protein complement(2969299..2969520) Clostridium botulinum A str. ATCC 19397 5396611 YP_001385122.1 CDS CLB_2823 NC_009697.1 2969737 2970288 D identified by match to protein family HMM PF01381; DNA-binding protein 2969737..2970288 Clostridium botulinum A str. ATCC 19397 5395781 YP_001385123.1 CDS CLB_2824 NC_009697.1 2970361 2971500 D identified by match to protein family HMM PF00589; phage integrase family site specific recombinase 2970361..2971500 Clostridium botulinum A str. ATCC 19397 5395350 YP_001385124.1 CDS rumA-1 NC_009697.1 2971585 2972937 R identified by match to protein family HMM PF01938; match to protein family HMM PF02475; match to protein family HMM PF05958; match to protein family HMM TIGR00479; 23S rRNA (uracil-5-)-methyltransferase RumA complement(2971585..2972937) Clostridium botulinum A str. ATCC 19397 5397584 YP_001385125.1 CDS CLB_2826 NC_009697.1 2973224 2973670 R identified by Glimmer3; hypothetical protein complement(2973224..2973670) Clostridium botulinum A str. ATCC 19397 5397205 YP_001385126.1 CDS CLB_2827 NC_009697.1 2974001 2975860 D identified by match to protein family HMM PF00884; sulfatase family protein 2974001..2975860 Clostridium botulinum A str. ATCC 19397 5397364 YP_001385127.1 CDS CLB_2828 NC_009697.1 2975886 2976638 D identified by match to protein family HMM PF01925; hypothetical protein 2975886..2976638 Clostridium botulinum A str. ATCC 19397 5397063 YP_001385128.1 CDS ribH NC_009697.1 2977048 2977512 R RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase complement(2977048..2977512) Clostridium botulinum A str. ATCC 19397 5396004 YP_001385129.1 CDS ribAB NC_009697.1 2977544 2978749 R identified by match to protein family HMM PF00925; match to protein family HMM PF00926; match to protein family HMM TIGR00505; match to protein family HMM TIGR00506; bifunctional riboflavin biosynthesis protein RibAB complement(2977544..2978749) Clostridium botulinum A str. ATCC 19397 5394669 YP_001385130.1 CDS ribE NC_009697.1 2979057 2979743 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(2979057..2979743) Clostridium botulinum A str. ATCC 19397 5395897 YP_001385131.1 CDS ribD NC_009697.1 2979724 2980821 R identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326; riboflavin biosynthesis protein RibD complement(2979724..2980821) Clostridium botulinum A str. ATCC 19397 5396350 YP_001385132.1 CDS pepD-3 NC_009697.1 2981225 2982661 R identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893; aminoacyl-histidine dipeptidase complement(2981225..2982661) Clostridium botulinum A str. ATCC 19397 5395514 YP_001385133.1 CDS CLB_2834 NC_009697.1 2983042 2983935 D identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 2983042..2983935 Clostridium botulinum A str. ATCC 19397 5396450 YP_001385134.1 CDS mgtA NC_009697.1 2984173 2986818 R identified by match to protein family HMM PF00122; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01524; magnesium-translocating P-type ATPase complement(2984173..2986818) Clostridium botulinum A str. ATCC 19397 5397124 YP_001385135.1 CDS CLB_2836 NC_009697.1 2987561 2987965 R hypothetical protein complement(2987561..2987965) Clostridium botulinum A str. ATCC 19397 5395872 YP_001385136.1 CDS purD NC_009697.1 2988293 2989534 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(2988293..2989534) Clostridium botulinum A str. ATCC 19397 5396039 YP_001385137.1 CDS purH NC_009697.1 2989683 2991182 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(2989683..2991182) Clostridium botulinum A str. ATCC 19397 5395203 YP_001385138.1 CDS purN NC_009697.1 2991396 2992013 R glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase complement(2991396..2992013) Clostridium botulinum A str. ATCC 19397 5396964 YP_001385139.1 CDS purM NC_009697.1 2992141 2993136 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(2992141..2993136) Clostridium botulinum A str. ATCC 19397 5394948 YP_001385140.1 CDS purF-1 NC_009697.1 2993197 2994645 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(2993197..2994645) Clostridium botulinum A str. ATCC 19397 5395661 YP_001385141.1 CDS purC NC_009697.1 2994737 2995441 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(2994737..2995441) Clostridium botulinum A str. ATCC 19397 5397787 YP_001385142.1 CDS purE NC_009697.1 2995441 2995920 R identified by match to protein family HMM PF00731; match to protein family HMM TIGR01162; phosphoribosylaminoimidazole carboxylase catalytic subunit complement(2995441..2995920) Clostridium botulinum A str. ATCC 19397 5395181 YP_001385143.1 CDS CLB_2844 NC_009697.1 2996441 2996575 D identified by Glimmer3; hypothetical protein 2996441..2996575 Clostridium botulinum A str. ATCC 19397 5395432 YP_001385144.1 CDS CLB_2845 NC_009697.1 2996596 2999151 R identified by match to protein family HMM PF00111; match to protein family HMM PF01315; match to protein family HMM PF01799; match to protein family HMM PF02738; match to protein family HMM TIGR03311; xanthine dehydrogenase family protein, molybdopterin-binding subunit complement(2996596..2999151) Clostridium botulinum A str. ATCC 19397 5396977 YP_001385145.1 CDS CLB_2846 NC_009697.1 2999526 3000743 R Zn-dependent extracellular dipeptidase; similar to succinyl-diaminopimelate desuccinylases; peptidase complement(2999526..3000743) Clostridium botulinum A str. ATCC 19397 5398116 YP_001385146.1 CDS CLB_2847 NC_009697.1 3000769 3002097 R in Escherichia coli expression is induced in response to phase-specific signals and controlled by RpoS; chlorohydrolase/aminohydrolase complement(3000769..3002097) Clostridium botulinum A str. ATCC 19397 5395888 YP_001385147.1 CDS CLB_2848 NC_009697.1 3002128 3005145 R with YgfM and YgfN forms a selenate reductase, which seems to catalyze the reduction of selenate to selenite; YgfK mutants are unable to reduce selenate; involved in purine salvage process; seems to act as an oxidoreductase, but sequence similarity suggests it is a dihydrothymine dehydrogenase; selenate reductase subunit YgfK complement(3002128..3005145) Clostridium botulinum A str. ATCC 19397 5395508 YP_001385148.1 CDS CLB_2849 NC_009697.1 3005181 3006377 R identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR03316; aspartate/ornithine carbamoyltransferase family protein complement(3005181..3006377) Clostridium botulinum A str. ATCC 19397 5394940 YP_001385149.1 CDS hydA-2 NC_009697.1 3006719 3008113 R catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; phenylhydantoinase complement(3006719..3008113) Clostridium botulinum A str. ATCC 19397 5395097 YP_001385150.1 CDS CLB_2851 NC_009697.1 3008163 3009569 R identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; match to protein family HMM TIGR03173; xanthine/uracil permease family protein complement(3008163..3009569) Clostridium botulinum A str. ATCC 19397 5395311 YP_001385151.1 CDS dpaL NC_009697.1 3009591 3010802 R catalyzes the formation of pyruvate from 2,3-diaminopropionate; diaminopropionate ammonia-lyase complement(3009591..3010802) Clostridium botulinum A str. ATCC 19397 5396900 YP_001385152.1 CDS CLB_2853 NC_009697.1 3011087 3012850 R identified by match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent transcriptional regulator complement(3011087..3012850) Clostridium botulinum A str. ATCC 19397 5396132 YP_001385153.1 CDS CLB_2854 NC_009697.1 3013213 3013950 D identified by match to protein family HMM TIGR03172; hypothetical protein 3013213..3013950 Clostridium botulinum A str. ATCC 19397 5395592 YP_001385154.1 CDS CLB_2855 NC_009697.1 3013965 3014579 D identified by match to protein family HMM TIGR03310; hypothetical protein 3013965..3014579 Clostridium botulinum A str. ATCC 19397 5395533 YP_001385155.1 CDS CLB_2856 NC_009697.1 3014560 3015408 D identified by match to protein family HMM TIGR03309; hypothetical protein 3014560..3015408 Clostridium botulinum A str. ATCC 19397 5395267 YP_001385156.1 CDS CLB_2857 NC_009697.1 3015390 3016199 D identified by match to protein family HMM PF02625; xanthine dehydrogenase accessory factor 3015390..3016199 Clostridium botulinum A str. ATCC 19397 5397388 YP_001385157.1 CDS CLB_2858 NC_009697.1 3016225 3016770 D hypothetical protein 3016225..3016770 Clostridium botulinum A str. ATCC 19397 5397724 YP_001385158.1 CDS CLB_2859 NC_009697.1 3016767 3017735 D identified by match to protein family HMM PF00950; match to protein family HMM PF01032; iron ABC transporter permease 3016767..3017735 Clostridium botulinum A str. ATCC 19397 5397836 YP_001385159.1 CDS CLB_2860 NC_009697.1 3017732 3018526 D identified by match to protein family HMM PF00005; iron ABC transporter ATP-binding protein 3017732..3018526 Clostridium botulinum A str. ATCC 19397 5396370 YP_001385160.1 CDS CLB_2861 NC_009697.1 3018578 3019636 D identified by match to protein family HMM PF01497; iron chelate uptake ABC transporter solute-binding protein 3018578..3019636 Clostridium botulinum A str. ATCC 19397 5397355 YP_001385161.1 CDS CLB_2862 NC_009697.1 3019774 3020106 D identified by Glimmer3; hypothetical protein 3019774..3020106 Clostridium botulinum A str. ATCC 19397 5395387 YP_001385162.1 CDS CLB_2863 NC_009697.1 3020234 3020806 D identified by match to protein family HMM PF00657; GDSL family lipase/acylhydrolase 3020234..3020806 Clostridium botulinum A str. ATCC 19397 5395429 YP_001385163.1 CDS CLB_2864 NC_009697.1 3020920 3021513 R identified by match to protein family HMM PF02698; hypothetical protein complement(3020920..3021513) Clostridium botulinum A str. ATCC 19397 5396937 YP_001385164.1 CDS CLB_2865 NC_009697.1 3021844 3023286 R identified by match to protein family HMM PF00860; xanthine/uracil permease family protein complement(3021844..3023286) Clostridium botulinum A str. ATCC 19397 5396874 YP_001385165.1 CDS CLB_2866 NC_009697.1 3023875 3025227 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein complement(3023875..3025227) Clostridium botulinum A str. ATCC 19397 5397089 YP_001385166.1 CDS CLB_2867 NC_009697.1 3026177 3028468 R helicase complement(3026177..3028468) Clostridium botulinum A str. ATCC 19397 5395863 YP_001385167.1 CDS mnmA NC_009697.1 3028975 3030036 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(3028975..3030036) Clostridium botulinum A str. ATCC 19397 5395616 YP_001385168.1 CDS CLB_2869 NC_009697.1 3030257 3030391 D identified by Glimmer3; hypothetical protein 3030257..3030391 Clostridium botulinum A str. ATCC 19397 5398035 YP_001385169.1 CDS CLB_2870 NC_009697.1 3030603 3032234 R identified by match to protein family HMM PF01546; M20/M25/M40 family peptidase complement(3030603..3032234) Clostridium botulinum A str. ATCC 19397 5395044 YP_001385170.1 CDS CLB_2871 NC_009697.1 3032234 3032731 R hypothetical protein complement(3032234..3032731) Clostridium botulinum A str. ATCC 19397 5395901 YP_001385171.1 CDS CLB_2872 NC_009697.1 3033049 3034374 D identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; HlyC/CorC family protein 3033049..3034374 Clostridium botulinum A str. ATCC 19397 5394731 YP_001385172.1 CDS CLB_2873 NC_009697.1 3034727 3035017 R identified by match to protein family HMM PF01910; hypothetical protein complement(3034727..3035017) Clostridium botulinum A str. ATCC 19397 5395993 YP_001385173.1 CDS thiC NC_009697.1 3035036 3036349 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(3035036..3036349) Clostridium botulinum A str. ATCC 19397 5396273 YP_001385174.1 CDS purF-2 NC_009697.1 3036560 3037936 R identified by match to protein family HMM PF00156; match to protein family HMM PF00310; match to protein family HMM TIGR01134; amidophosphoribosyltransferase complement(3036560..3037936) Clostridium botulinum A str. ATCC 19397 5398040 YP_001385175.1 CDS CLB_2876 NC_009697.1 3038199 3038480 R identified by match to protein family HMM PF04456; hypothetical protein complement(3038199..3038480) Clostridium botulinum A str. ATCC 19397 5395741 YP_001385176.1 CDS CLB_2877 NC_009697.1 3038536 3039225 R hypothetical protein complement(3038536..3039225) Clostridium botulinum A str. ATCC 19397 5395631 YP_001385177.1 CDS CLB_2878 NC_009697.1 3039227 3039877 R hypothetical protein complement(3039227..3039877) Clostridium botulinum A str. ATCC 19397 5396565 YP_001385178.1 CDS CLB_2879 NC_009697.1 3039884 3040741 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(3039884..3040741) Clostridium botulinum A str. ATCC 19397 5395579 YP_001385179.1 CDS CLB_2880 NC_009697.1 3040948 3041319 R identified by match to protein family HMM PF00392; GntR family transcriptional regulator complement(3040948..3041319) Clostridium botulinum A str. ATCC 19397 5394795 YP_001385180.1 CDS CLB_2881 NC_009697.1 3041957 3042469 D hypothetical protein 3041957..3042469 Clostridium botulinum A str. ATCC 19397 5396509 YP_001385181.1 CDS ribB NC_009697.1 3043059 3043700 D identified by match to protein family HMM PF00926; match to protein family HMM TIGR00506; 3,4-dihydroxy-2-butanone 4-phosphate synthase 3043059..3043700 Clostridium botulinum A str. ATCC 19397 5395338 YP_001385182.1 CDS CLB_2883 NC_009697.1 3043987 3044730 R identified by match to protein family HMM PF00037; (Fe-S)-binding protein complement(3043987..3044730) Clostridium botulinum A str. ATCC 19397 5396064 YP_001385183.1 CDS CLB_2884 NC_009697.1 3044835 3045512 D identified by match to protein family HMM PF00027; cyclic nucleotide-binding protein 3044835..3045512 Clostridium botulinum A str. ATCC 19397 5396643 YP_001385184.1 CDS CLB_2885 NC_009697.1 3045601 3046044 D identified by match to protein family HMM PF07486; cell wall hydrolase 3045601..3046044 Clostridium botulinum A str. ATCC 19397 5394938 YP_001385185.1 CDS CLB_2886 NC_009697.1 3046067 3046624 D identified by Glimmer3; hypothetical protein 3046067..3046624 Clostridium botulinum A str. ATCC 19397 5395582 YP_001385186.1 CDS CLB_2887 NC_009697.1 3046887 3047231 R identified by match to protein family HMM PF07883; hypothetical protein complement(3046887..3047231) Clostridium botulinum A str. ATCC 19397 5397889 YP_001385187.1 CDS CLB_2888 NC_009697.1 3047348 3049510 R identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062; phage infection protein complement(3047348..3049510) Clostridium botulinum A str. ATCC 19397 5396642 YP_001385188.1 CDS CLB_2889 NC_009697.1 3049818 3050570 R identified by match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase family protein complement(3049818..3050570) Clostridium botulinum A str. ATCC 19397 5396217 YP_001385189.1 CDS CLB_2890 NC_009697.1 3050949 3051911 R hypothetical protein complement(3050949..3051911) Clostridium botulinum A str. ATCC 19397 5396457 YP_001385190.1 CDS CLB_2891 NC_009697.1 3052372 3053625 D identified by match to protein family HMM PF00282; decarboxylase family protein 3052372..3053625 Clostridium botulinum A str. ATCC 19397 5396925 YP_001385191.1 CDS CLB_2894 NC_009697.1 3054097 3054216 R identified by Glimmer3; hypothetical protein complement(3054097..3054216) Clostridium botulinum A str. ATCC 19397 5397292 YP_001385192.1 CDS CLB_2895 NC_009697.1 3054314 3054847 R identified by Glimmer3; hypothetical protein complement(3054314..3054847) Clostridium botulinum A str. ATCC 19397 5395439 YP_001385193.1 CDS CLB_2896 NC_009697.1 3055064 3055216 D identified by Glimmer3; hypothetical protein 3055064..3055216 Clostridium botulinum A str. ATCC 19397 5398047 YP_001385194.1 CDS CLB_2897 NC_009697.1 3055694 3056428 R identified by match to protein family HMM PF02591; hypothetical protein complement(3055694..3056428) Clostridium botulinum A str. ATCC 19397 5396314 YP_001385195.1 CDS CLB_2898 NC_009697.1 3056567 3057370 R identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486; hypothetical protein complement(3056567..3057370) Clostridium botulinum A str. ATCC 19397 5397714 YP_001385196.1 CDS CLB_2899 NC_009697.1 3057361 3058050 R identified by match to protein family HMM PF04816; hypothetical protein complement(3057361..3058050) Clostridium botulinum A str. ATCC 19397 5396490 YP_001385197.1 CDS CLB_2900 NC_009697.1 3058126 3059013 R hypothetical protein complement(3058126..3059013) Clostridium botulinum A str. ATCC 19397 5397868 YP_001385198.1 CDS rpoD NC_009697.1 3059088 3060173 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium; RNA polymerase sigma factor RpoD complement(3059088..3060173) Clostridium botulinum A str. ATCC 19397 5397697 YP_001385199.1 CDS dnaG NC_009697.1 3060198 3061970 R synthesizes RNA primers at the replication forks; DNA primase complement(3060198..3061970) Clostridium botulinum A str. ATCC 19397 5394684 YP_001385200.1 CDS CLB_2903 NC_009697.1 3062254 3063282 R dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein complement(3062254..3063282) Clostridium botulinum A str. ATCC 19397 5395441 YP_001385201.1 CDS CLB_2904 NC_009697.1 3063424 3064494 D identified by match to protein family HMM TIGR02906; spore coat protein-like protein 3063424..3064494 Clostridium botulinum A str. ATCC 19397 5397250 YP_001385202.1 CDS ppdK NC_009697.1 3064547 3067180 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase complement(3064547..3067180) Clostridium botulinum A str. ATCC 19397 5395060 YP_001385203.1 CDS CLB_2906 NC_009697.1 3067260 3067901 R identified by match to protein family HMM PF00571; match to protein family HMM PF08279; hypothetical protein complement(3067260..3067901) Clostridium botulinum A str. ATCC 19397 5397744 YP_001385204.1 CDS CLB_2907 NC_009697.1 3068411 3069031 R identified by match to protein family HMM PF00627; UBA/TS-N domain-containing protein complement(3068411..3069031) Clostridium botulinum A str. ATCC 19397 5395259 YP_001385205.1 CDS era NC_009697.1 3069810 3070700 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(3069810..3070700) Clostridium botulinum A str. ATCC 19397 5396359 YP_001385206.1 CDS cdd NC_009697.1 3070716 3071114 R Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase complement(3070716..3071114) Clostridium botulinum A str. ATCC 19397 5396238 YP_001385207.1 CDS CLB_2911 NC_009697.1 3071198 3071896 R identified by match to protein family HMM PF01219; match to protein family HMM PF01569; diacylglycerol kinase/PAP2 family protein complement(3071198..3071896) Clostridium botulinum A str. ATCC 19397 5397281 YP_001385208.1 CDS CLB_2912 NC_009697.1 3071935 3072435 R identified by match to protein family HMM PF02130; match to protein family HMM TIGR00043; metalloprotease complement(3071935..3072435) Clostridium botulinum A str. ATCC 19397 5396567 YP_001385209.1 CDS CLB_2913 NC_009697.1 3072432 3074519 R identified by match to protein family HMM PF01966; match to protein family HMM PF07697; match to protein family HMM PF07698; match to protein family HMM TIGR00277; hydrolase complement(3072432..3074519) Clostridium botulinum A str. ATCC 19397 5395146 YP_001385210.1 CDS CLB_2914 NC_009697.1 3074542 3075702 R identified by match to protein family HMM PF06898; match to protein family HMM TIGR02876; stage IV sporulation protein complement(3074542..3075702) Clostridium botulinum A str. ATCC 19397 5396761 YP_001385211.1 CDS yqfC NC_009697.1 3075692 3075988 R identified by match to protein family HMM PF07241; match to protein family HMM TIGR02856; sporulation protein YqfC complement(3075692..3075988) Clostridium botulinum A str. ATCC 19397 5394577 YP_001385212.1 CDS CLB_2916 NC_009697.1 3076102 3076548 R identified by match to protein family HMM PF02637; GatB/Yqey domain-containing protein complement(3076102..3076548) Clostridium botulinum A str. ATCC 19397 5396541 YP_001385213.1 CDS rpsU NC_009697.1 3076591 3076767 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(3076591..3076767) Clostridium botulinum A str. ATCC 19397 5395597 YP_001385214.1 CDS CLB_2918 NC_009697.1 3076904 3077248 R identified by match to protein family HMM PF01230; HIT family protein complement(3076904..3077248) Clostridium botulinum A str. ATCC 19397 5397688 YP_001385215.1 CDS CLB_2919 NC_009697.1 3077305 3078603 R identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01579; RNA modification protein complement(3077305..3078603) Clostridium botulinum A str. ATCC 19397 5396184 YP_001385216.1 CDS CLB_2920 NC_009697.1 3078603 3079361 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(3078603..3079361) Clostridium botulinum A str. ATCC 19397 5395446 YP_001385217.1 CDS prmA NC_009697.1 3079459 3080397 R methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase complement(3079459..3080397) Clostridium botulinum A str. ATCC 19397 5397973 YP_001385218.1 CDS dnaJ NC_009697.1 3080575 3081720 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(3080575..3081720) Clostridium botulinum A str. ATCC 19397 5396136 YP_001385219.1 CDS dnaK NC_009697.1 3081863 3083734 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(3081863..3083734) Clostridium botulinum A str. ATCC 19397 5396458 YP_001385220.1 CDS grpE NC_009697.1 3083789 3084433 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(3083789..3084433) Clostridium botulinum A str. ATCC 19397 5396251 YP_001385221.1 CDS hrcA NC_009697.1 3084460 3085491 R Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor complement(3084460..3085491) Clostridium botulinum A str. ATCC 19397 5397851 YP_001385222.1 CDS CLB_2926 NC_009697.1 3085692 3086834 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(3085692..3086834) Clostridium botulinum A str. ATCC 19397 5395776 YP_001385223.1 CDS lepA NC_009697.1 3086861 3088669 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(3086861..3088669) Clostridium botulinum A str. ATCC 19397 5396388 YP_001385224.1 CDS CLB_2928 NC_009697.1 3088810 3089205 R hypothetical protein complement(3088810..3089205) Clostridium botulinum A str. ATCC 19397 5395721 YP_001385225.1 CDS CLB_2929 NC_009697.1 3089276 3090367 R identified by match to protein family HMM PF07454; match to protein family HMM TIGR02867; stage II sporulation protein complement(3089276..3090367) Clostridium botulinum A str. ATCC 19397 5395212 YP_001385226.1 CDS gpr NC_009697.1 3090552 3091526 R Initiates the rapid degradation of small, acid-soluble proteins during spore germination; germination protease complement(3090552..3091526) Clostridium botulinum A str. ATCC 19397 5397788 YP_001385227.1 CDS rpsT NC_009697.1 3091736 3092002 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 3091736..3092002 Clostridium botulinum A str. ATCC 19397 5394574 YP_001385228.1 CDS holA NC_009697.1 3092037 3093068 R required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta complement(3092037..3093068) Clostridium botulinum A str. ATCC 19397 5395008 YP_001385229.1 CDS CLB_2933 NC_009697.1 3093097 3094884 R identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360; ComEC/Rec2 family protein complement(3093097..3094884) Clostridium botulinum A str. ATCC 19397 5396137 YP_001385230.1 CDS CLB_2934 NC_009697.1 3094896 3095126 R hypothetical protein complement(3094896..3095126) Clostridium botulinum A str. ATCC 19397 5395605 YP_001385231.1 CDS CLB_2935 NC_009697.1 3095231 3097825 R identified by match to protein family HMM PF00122; match to protein family HMM PF00690; cation transporting ATPase complement(3095231..3097825) Clostridium botulinum A str. ATCC 19397 5394793 YP_001385232.1 CDS CLB_2936 NC_009697.1 3098334 3099305 R identified by match to protein family HMM PF07556; hypothetical protein complement(3098334..3099305) Clostridium botulinum A str. ATCC 19397 5396269 YP_001385233.1 CDS CLB_2937 NC_009697.1 3099316 3099855 D identified by Glimmer3; hypothetical protein 3099316..3099855 Clostridium botulinum A str. ATCC 19397 5395207 YP_001385234.1 CDS CLB_2938 NC_009697.1 3101013 3101132 R identified by Glimmer3; hypothetical protein complement(3101013..3101132) Clostridium botulinum A str. ATCC 19397 5395061 YP_001385235.1 CDS CLB_2939 NC_009697.1 3101382 3101618 D identified by match to protein family HMM PF01381; DNA-binding protein 3101382..3101618 Clostridium botulinum A str. ATCC 19397 5398006 YP_001385236.1 CDS CLB_2940 NC_009697.1 3101695 3101973 D identified by match to protein family HMM PF01381; DNA-binding protein 3101695..3101973 Clostridium botulinum A str. ATCC 19397 5395653 YP_001385237.1 CDS CLB_2941 NC_009697.1 3102008 3102595 R identified by Glimmer3; hypothetical protein complement(3102008..3102595) Clostridium botulinum A str. ATCC 19397 5395739 YP_001385238.1 CDS CLB_2942 NC_009697.1 3102822 3103418 R identified by similarity to GB:BAE47892.1; hypothetical protein complement(3102822..3103418) Clostridium botulinum A str. ATCC 19397 5395390 YP_001385239.1 CDS CLB_2943 NC_009697.1 3103409 3104635 R identified by Glimmer3; hypothetical protein complement(3103409..3104635) Clostridium botulinum A str. ATCC 19397 5396882 YP_001385240.1 CDS CLB_2944 NC_009697.1 3104632 3104781 R identified by Glimmer3; hypothetical protein complement(3104632..3104781) Clostridium botulinum A str. ATCC 19397 5395763 YP_001385241.1 CDS CLB_2945 NC_009697.1 3104916 3105467 R identified by Glimmer3; hypothetical protein complement(3104916..3105467) Clostridium botulinum A str. ATCC 19397 5395052 YP_001385242.1 CDS CLB_2946 NC_009697.1 3105553 3105714 R identified by Glimmer3; hypothetical protein complement(3105553..3105714) Clostridium botulinum A str. ATCC 19397 5394546 YP_001385243.1 CDS CLB_2947 NC_009697.1 3105836 3106036 R identified by match to protein family HMM PF01381; DNA-binding protein complement(3105836..3106036) Clostridium botulinum A str. ATCC 19397 5397135 YP_001385244.1 CDS CLB_2948 NC_009697.1 3106217 3106462 R identified by Glimmer3; hypothetical protein complement(3106217..3106462) Clostridium botulinum A str. ATCC 19397 5395736 YP_001385245.1 CDS CLB_2949 NC_009697.1 3106459 3106635 R identified by similarity to GB:CAC97788.1; hypothetical protein complement(3106459..3106635) Clostridium botulinum A str. ATCC 19397 5397249 YP_001385246.1 CDS CLB_2950 NC_009697.1 3106765 3107535 R identified by match to protein family HMM PF01520; match to protein family HMM PF08239; N-acetylmuramoyl-L-alanine amidase complement(3106765..3107535) Clostridium botulinum A str. ATCC 19397 5397896 YP_001385247.1 CDS CLB_2951 NC_009697.1 3107580 3107996 R identified by match to protein family HMM PF05105; match to protein family HMM TIGR01593; toxin secretion/phage lysis holin complement(3107580..3107996) Clostridium botulinum A str. ATCC 19397 5396828 YP_001385248.1 CDS CLB_2952 NC_009697.1 3108086 3108790 R identified by similarity to SP:P34020; match to protein family HMM PF01183; glycosyl hydrolase family protein complement(3108086..3108790) Clostridium botulinum A str. ATCC 19397 5396230 YP_001385249.1 CDS CLB_2953 NC_009697.1 3108831 3109019 R identified by similarity to GB:BAB80843.1; hypothetical protein complement(3108831..3109019) Clostridium botulinum A str. ATCC 19397 5396890 YP_001385250.1 CDS CLB_2954 NC_009697.1 3109033 3109287 R identified by similarity to GB:AAK79083.1; hypothetical protein complement(3109033..3109287) Clostridium botulinum A str. ATCC 19397 5397340 YP_001385251.1 CDS CLB_2955 NC_009697.1 3109374 3109805 R identified by similarity to GB:AAO36605.1; hypothetical protein complement(3109374..3109805) Clostridium botulinum A str. ATCC 19397 5397558 YP_001385252.1 CDS CLB_2956 NC_009697.1 3109806 3110477 R identified by similarity to GB:AAO36606.1; hypothetical protein complement(3109806..3110477) Clostridium botulinum A str. ATCC 19397 5395493 YP_001385253.1 CDS CLB_2957 NC_009697.1 3110588 3110770 R identified by similarity to GB:AAX53493.1; hypothetical protein complement(3110588..3110770) Clostridium botulinum A str. ATCC 19397 5396871 YP_001385254.1 CDS CLB_2958 NC_009697.1 3110772 3111098 R identified by Glimmer3; hypothetical protein complement(3110772..3111098) Clostridium botulinum A str. ATCC 19397 5397358 YP_001385255.1 CDS CLB_2959 NC_009697.1 3111110 3112540 R identified by similarity to GB:BAD74826.1; hypothetical protein complement(3111110..3112540) Clostridium botulinum A str. ATCC 19397 5394944 YP_001385256.1 CDS CLB_2960 NC_009697.1 3112540 3113625 R identified by similarity to GB:BAD74827.1; hypothetical protein complement(3112540..3113625) Clostridium botulinum A str. ATCC 19397 5395963 YP_001385257.1 CDS CLB_2961 NC_009697.1 3113629 3114498 R identified by similarity to GB:AAS39346.1; hypothetical protein complement(3113629..3114498) Clostridium botulinum A str. ATCC 19397 5396546 YP_001385258.1 CDS CLB_2962 NC_009697.1 3114511 3119655 R identified by match to protein family HMM TIGR01760; TP901 family phage tail tape measure protein complement(3114511..3119655) Clostridium botulinum A str. ATCC 19397 5396989 YP_001385259.1 CDS CLB_2963 NC_009697.1 3119708 3119890 R identified by Glimmer3; hypothetical protein complement(3119708..3119890) Clostridium botulinum A str. ATCC 19397 5394627 YP_001385260.1 CDS CLB_2964 NC_009697.1 3119911 3120240 R identified by similarity to GB:AAK79849.1; hypothetical protein complement(3119911..3120240) Clostridium botulinum A str. ATCC 19397 5394722 YP_001385261.1 CDS CLB_2965 NC_009697.1 3120241 3120840 R identified by match to protein family HMM TIGR01603; phi13 family phage major tail protein complement(3120241..3120840) Clostridium botulinum A str. ATCC 19397 5397050 YP_001385262.1 CDS CLB_2966 NC_009697.1 3120843 3121184 R identified by similarity to GB:AAU40455.1; hypothetical protein complement(3120843..3121184) Clostridium botulinum A str. ATCC 19397 5395738 YP_001385263.1 CDS CLB_2967 NC_009697.1 3121273 3121647 R identified by match to protein family HMM PF07772; match to protein family HMM TIGR01725; HK97 family phage protein complement(3121273..3121647) Clostridium botulinum A str. ATCC 19397 5394733 YP_001385264.1 CDS CLB_2968 NC_009697.1 3121649 3122008 R identified by match to protein family HMM TIGR01563; phage head-tail adaptor complement(3121649..3122008) Clostridium botulinum A str. ATCC 19397 5398034 YP_001385265.1 CDS CLB_2969 NC_009697.1 3121959 3122258 R identified by similarity to GB:CAC85562.1; hypothetical protein complement(3121959..3122258) Clostridium botulinum A str. ATCC 19397 5397514 YP_001385266.1 CDS CLB_2970 NC_009697.1 3122268 3123413 R major capsid protein complement(3122268..3123413) Clostridium botulinum A str. ATCC 19397 5394925 YP_001385267.1 CDS CLB_2971 NC_009697.1 3123413 3124156 R identified by match to protein family HMM PF00574; Clp protease complement(3123413..3124156) Clostridium botulinum A str. ATCC 19397 5395482 YP_001385268.1 CDS CLB_2972 NC_009697.1 3124159 3125220 R identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537; HK97 family phage portal protein complement(3124159..3125220) Clostridium botulinum A str. ATCC 19397 5394570 YP_001385269.1 CDS CLB_2973 NC_009697.1 3125326 3126972 R identified by match to protein family HMM PF03354; phage terminase, large subunit complement(3125326..3126972) Clostridium botulinum A str. ATCC 19397 5396262 YP_001385270.1 CDS CLB_2974 NC_009697.1 3126956 3127447 R phage terminase small subunit complement(3126956..3127447) Clostridium botulinum A str. ATCC 19397 5394908 YP_001385271.1 CDS CLB_2975 NC_009697.1 3127939 3128247 R identified by Glimmer3; hypothetical protein complement(3127939..3128247) Clostridium botulinum A str. ATCC 19397 5395813 YP_001385272.1 CDS CLB_2976 NC_009697.1 3128444 3128989 R identified by match to protein family HMM PF00589; phage integrase family site specific recombinase complement(3128444..3128989) Clostridium botulinum A str. ATCC 19397 5395728 YP_001385273.1 CDS CLB_2977 NC_009697.1 3128986 3129201 R identified by similarity to GB:AAK79876.1; hypothetical protein complement(3128986..3129201) Clostridium botulinum A str. ATCC 19397 5396782 YP_001385274.1 CDS CLB_2978 NC_009697.1 3129386 3129814 R identified by similarity to GB:AAK42408.1; hypothetical protein complement(3129386..3129814) Clostridium botulinum A str. ATCC 19397 5395033 YP_001385275.1 CDS CLB_2979 NC_009697.1 3129798 3129968 R identified by Glimmer3; hypothetical protein complement(3129798..3129968) Clostridium botulinum A str. ATCC 19397 5396755 YP_001385276.1 CDS CLB_2980 NC_009697.1 3129970 3130260 R identified by similarity to GB:AAO35664.1; hypothetical protein complement(3129970..3130260) Clostridium botulinum A str. ATCC 19397 5397184 YP_001385277.1 CDS CLB_2981 NC_009697.1 3130253 3130405 R identified by Glimmer3; hypothetical protein complement(3130253..3130405) Clostridium botulinum A str. ATCC 19397 5397386 YP_001385278.1 CDS CLB_2982 NC_009697.1 3130417 3131412 R identified by match to protein family HMM PF00589; match to protein family HMM PF02899; phage integrase family integrase/recombinase complement(3130417..3131412) Clostridium botulinum A str. ATCC 19397 5397923 YP_001385279.1 CDS CLB_2983 NC_009697.1 3131465 3131602 R identified by Glimmer3; hypothetical protein complement(3131465..3131602) Clostridium botulinum A str. ATCC 19397 5395404 YP_001385280.1 CDS CLB_2984 NC_009697.1 3131711 3132142 R identified by Glimmer3; hypothetical protein complement(3131711..3132142) Clostridium botulinum A str. ATCC 19397 5396671 YP_001385281.1 CDS CLB_2985 NC_009697.1 3132215 3133162 R identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675; DNA-cytosine methyltransferase family protein complement(3132215..3133162) Clostridium botulinum A str. ATCC 19397 5397325 YP_001385282.1 CDS CLB_2986 NC_009697.1 3133205 3133924 R identified by Glimmer3; hypothetical protein complement(3133205..3133924) Clostridium botulinum A str. ATCC 19397 5395717 YP_001385283.1 CDS CLB_2987 NC_009697.1 3133983 3134267 R identified by similarity to GB:AAM25375.1; hypothetical protein complement(3133983..3134267) Clostridium botulinum A str. ATCC 19397 5396017 YP_001385284.1 CDS CLB_2988 NC_009697.1 3134258 3134773 R identified by Glimmer3; hypothetical protein complement(3134258..3134773) Clostridium botulinum A str. ATCC 19397 5397240 YP_001385285.1 CDS CLB_2989 NC_009697.1 3134792 3135403 R identified by similarity to GB:AAU40346.1; hypothetical protein complement(3134792..3135403) Clostridium botulinum A str. ATCC 19397 5395603 YP_001385286.1 CDS CLB_2990 NC_009697.1 3135492 3136388 R identified by match to protein family HMM TIGR01714; phage replisome organizer complement(3135492..3136388) Clostridium botulinum A str. ATCC 19397 5395312 YP_001385287.1 CDS CLB_2991 NC_009697.1 3136435 3136704 R identified by similarity to GB:ABB16063.1; hypothetical protein complement(3136435..3136704) Clostridium botulinum A str. ATCC 19397 5396818 YP_001385288.1 CDS CLB_2992 NC_009697.1 3136721 3136903 R identified by similarity to GB:ABK61203.1; hypothetical protein complement(3136721..3136903) Clostridium botulinum A str. ATCC 19397 5394977 YP_001385289.1 CDS CLB_2993 NC_009697.1 3136905 3137165 R identified by Glimmer3; hypothetical protein complement(3136905..3137165) Clostridium botulinum A str. ATCC 19397 5395517 YP_001385290.1 CDS CLB_2994 NC_009697.1 3137177 3137938 R hypothetical protein complement(3137177..3137938) Clostridium botulinum A str. ATCC 19397 5398094 YP_001385291.1 CDS CLB_2995 NC_009697.1 3137950 3138231 R identified by match to protein family HMM TIGR01764; excisionase family DNA-binding protein complement(3137950..3138231) Clostridium botulinum A str. ATCC 19397 5397122 YP_001385292.1 CDS CLB_2996 NC_009697.1 3138203 3138445 R identified by match to protein family HMM PF01381; DNA-binding protein complement(3138203..3138445) Clostridium botulinum A str. ATCC 19397 5395013 YP_001385293.1 CDS CLB_2997 NC_009697.1 3138648 3138980 D identified by match to protein family HMM PF01381; DNA-binding protein 3138648..3138980 Clostridium botulinum A str. ATCC 19397 5395937 YP_001385294.1 CDS CLB_2998 NC_009697.1 3139041 3140204 D identified by match to protein family HMM PF00589; phage integrase family site specific recombinase 3139041..3140204 Clostridium botulinum A str. ATCC 19397 5398008 YP_001385295.1 CDS selB NC_009697.1 3141074 3142981 R identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM PF09106; match to protein family HMM PF09107; match to protein family HMM TIGR00231; match to protein family HMM TIGR00475; selenocysteine-specific translation elongation factor complement(3141074..3142981) Clostridium botulinum A str. ATCC 19397 5396006 YP_001385296.1 CDS selA NC_009697.1 3143000 3144388 R catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase complement(3143000..3144388) Clostridium botulinum A str. ATCC 19397 5395321 YP_001385297.1 CDS selD NC_009697.1 3144455 3145543 R Selenoprotein. identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00476; selenide, water dikinase complement(3144455..3145543) Clostridium botulinum A str. ATCC 19397 5395222 YP_001385298.1 CDS CLB_3003 NC_009697.1 3145640 3146248 R identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426; comE operon protein 1 complement(3145640..3146248) Clostridium botulinum A str. ATCC 19397 5394538 YP_001385299.1 CDS CLB_3004 NC_009697.1 3146437 3147684 D identified by match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase 3146437..3147684 Clostridium botulinum A str. ATCC 19397 5398110 YP_001385300.1 CDS CLB_3005 NC_009697.1 3147792 3148694 R identified by match to protein family HMM PF00849; match to protein family HMM TIGR00005; RluA family pseudouridine synthase complement(3147792..3148694) Clostridium botulinum A str. ATCC 19397 5396304 YP_001385301.1 CDS CLB_3006 NC_009697.1 3149020 3149400 R identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004; endoribonuclease L-PSP complement(3149020..3149400) Clostridium botulinum A str. ATCC 19397 5397260 YP_001385302.1 CDS CLB_3007 NC_009697.1 3149416 3150690 R identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350; cell envelope-related function transcriptional attenuator complement(3149416..3150690) Clostridium botulinum A str. ATCC 19397 5396018 YP_001385303.1 CDS CLB_3008 NC_009697.1 3150701 3151270 R identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; match to protein family HMM TIGR00488; HDIG domain-containing protein complement(3150701..3151270) Clostridium botulinum A str. ATCC 19397 5395484 YP_001385304.1 CDS nadD NC_009697.1 3151353 3151958 R transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase complement(3151353..3151958) Clostridium botulinum A str. ATCC 19397 5395827 YP_001385305.1 CDS CLB_3010 NC_009697.1 3152201 3152494 R identified by match to protein family HMM PF01985; match to protein family HMM TIGR00253; RNA-binding protein complement(3152201..3152494) Clostridium botulinum A str. ATCC 19397 5398048 YP_001385306.1 CDS obgE NC_009697.1 3152521 3153795 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(3152521..3153795) Clostridium botulinum A str. ATCC 19397 5396751 YP_001385307.1 CDS rpmA NC_009697.1 3154174 3154476 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(3154174..3154476) Clostridium botulinum A str. ATCC 19397 5395735 YP_001385308.1 CDS CLB_3013 NC_009697.1 3154479 3154805 R identified by match to protein family HMM PF04327; hypothetical protein complement(3154479..3154805) Clostridium botulinum A str. ATCC 19397 5397125 YP_001385309.1 CDS rplU NC_009697.1 3154808 3155122 R identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061; 50S ribosomal protein L21 complement(3154808..3155122) Clostridium botulinum A str. ATCC 19397 5398108 YP_001385310.1 CDS CLB_3015 NC_009697.1 3155246 3156685 R identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757; ribonuclease complement(3155246..3156685) Clostridium botulinum A str. ATCC 19397 5397993 YP_001385311.1 CDS CLB_3016 NC_009697.1 3156843 3157556 R hypothetical protein complement(3156843..3157556) Clostridium botulinum A str. ATCC 19397 5397109 YP_001385312.1 CDS CLB_3017 NC_009697.1 3157534 3159384 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(3157534..3159384) Clostridium botulinum A str. ATCC 19397 5396123 YP_001385313.1 CDS CLB_3018 NC_009697.1 3159497 3160348 R identified by match to protein family HMM PF02163; metalloprotease complement(3159497..3160348) Clostridium botulinum A str. ATCC 19397 5395606 YP_001385314.1 CDS CLB_3019 NC_009697.1 3160403 3161188 R identified by match to protein family HMM PF01551; M24/M37 family peptidase complement(3160403..3161188) Clostridium botulinum A str. ATCC 19397 5396880 YP_001385315.1 CDS rodA-2 NC_009697.1 3161508 3162626 R identified by match to protein family HMM PF01098; match to protein family HMM TIGR02210; rod shape-determining protein RodA complement(3161508..3162626) Clostridium botulinum A str. ATCC 19397 5396171 YP_001385316.1 CDS minE NC_009697.1 3162725 3162988 R works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE complement(3162725..3162988) Clostridium botulinum A str. ATCC 19397 5395012 YP_001385317.1 CDS minD NC_009697.1 3163002 3163799 R identified by match to protein family HMM PF01656; match to protein family HMM TIGR01968; septum site-determining protein MinD complement(3163002..3163799) Clostridium botulinum A str. ATCC 19397 5394887 YP_001385318.1 CDS minC NC_009697.1 3163817 3164446 R blocks the formation of polar Z-ring septums; septum formation inhibitor complement(3163817..3164446) Clostridium botulinum A str. ATCC 19397 5397482 YP_001385319.1 CDS CLB_3024 NC_009697.1 3164621 3167395 R identified by match to protein family HMM PF00905; match to protein family HMM PF03717; penicillin-binding protein complement(3164621..3167395) Clostridium botulinum A str. ATCC 19397 5395914 YP_001385320.1 CDS mreD NC_009697.1 3167415 3167906 R identified by match to protein family HMM PF04093; match to protein family HMM TIGR03426; rod shape-determining protein MreD complement(3167415..3167906) Clostridium botulinum A str. ATCC 19397 5397620 YP_001385321.1 CDS mreC NC_009697.1 3167917 3168762 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(3167917..3168762) Clostridium botulinum A str. ATCC 19397 5397838 YP_001385322.1 CDS CLB_3027 NC_009697.1 3168769 3169779 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(3168769..3169779) Clostridium botulinum A str. ATCC 19397 5395611 YP_001385323.1 CDS radC NC_009697.1 3169808 3170494 R Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC complement(3169808..3170494) Clostridium botulinum A str. ATCC 19397 5397248 YP_001385324.1 CDS maf NC_009697.1 3170509 3171093 R Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein complement(3170509..3171093) Clostridium botulinum A str. ATCC 19397 5396956 YP_001385325.1 CDS CLB_3030 NC_009697.1 3171109 3171366 R hypothetical protein complement(3171109..3171366) Clostridium botulinum A str. ATCC 19397 5397245 YP_001385326.1 CDS CLB_3031 NC_009697.1 3171476 3172177 R hypothetical protein complement(3171476..3172177) Clostridium botulinum A str. ATCC 19397 5397055 YP_001385327.1 CDS CLB_3032 NC_009697.1 3172403 3172942 R hypothetical protein complement(3172403..3172942) Clostridium botulinum A str. ATCC 19397 5398106 YP_001385328.1 CDS CLB_3033 NC_009697.1 3173368 3173922 D identified by match to protein family HMM PF02567; hypothetical protein 3173368..3173922 Clostridium botulinum A str. ATCC 19397 5397452 YP_001385329.1 CDS pheB NC_009697.1 3173981 3174418 R identified by match to protein family HMM PF01842; hypothetical protein complement(3173981..3174418) Clostridium botulinum A str. ATCC 19397 5396106 YP_001385330.1 CDS CLB_3035 NC_009697.1 3174475 3174609 R identified by Glimmer3; hypothetical protein complement(3174475..3174609) Clostridium botulinum A str. ATCC 19397 5396579 YP_001385331.1 CDS CLB_3037 NC_009697.1 3175153 3175677 R identified by match to protein family HMM PF01464; transglycosylase complement(3175153..3175677) Clostridium botulinum A str. ATCC 19397 5395648 YP_001385332.1 CDS coaE NC_009697.1 3175716 3176354 R catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase complement(3175716..3176354) Clostridium botulinum A str. ATCC 19397 5396617 YP_001385333.1 CDS polA NC_009697.1 3176366 3178993 R has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I complement(3176366..3178993) Clostridium botulinum A str. ATCC 19397 5395945 YP_001385334.1 CDS aroC NC_009697.1 3179011 3180135 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(3179011..3180135) Clostridium botulinum A str. ATCC 19397 5398221 YP_001385335.1 CDS CLB_3041 NC_009697.1 3180277 3181047 R identified by match to protein family HMM PF01520; match to protein family HMM PF08239; N-acetylmuramoyl-L-alanine amidase complement(3180277..3181047) Clostridium botulinum A str. ATCC 19397 5397402 YP_001385336.1 CDS CLB_3042 NC_009697.1 3181194 3181388 R hypothetical protein complement(3181194..3181388) Clostridium botulinum A str. ATCC 19397 5394763 YP_001385337.1 CDS CLB_3043 NC_009697.1 3181407 3181661 R hypothetical protein complement(3181407..3181661) Clostridium botulinum A str. ATCC 19397 5396032 YP_001385338.1 CDS CLB_3044 NC_009697.1 3181817 3182731 R hypothetical protein complement(3181817..3182731) Clostridium botulinum A str. ATCC 19397 5397263 YP_001385339.1 CDS CLB_3045 NC_009697.1 3182805 3183803 R hypothetical protein complement(3182805..3183803) Clostridium botulinum A str. ATCC 19397 5396559 YP_001385340.1 CDS CLB_3046 NC_009697.1 3183900 3185240 R identified by Glimmer3; hypothetical protein complement(3183900..3185240) Clostridium botulinum A str. ATCC 19397 5395825 YP_001385341.1 CDS CLB_3047 NC_009697.1 3185254 3187011 R identified by Glimmer3; hypothetical protein complement(3185254..3187011) Clostridium botulinum A str. ATCC 19397 5396574 YP_001385342.1 CDS CLB_3048 NC_009697.1 3187109 3188194 R hypothetical protein complement(3187109..3188194) Clostridium botulinum A str. ATCC 19397 5396930 YP_001385343.1 CDS CLB_3049 NC_009697.1 3188206 3189204 R hypothetical protein complement(3188206..3189204) Clostridium botulinum A str. ATCC 19397 5398119 YP_001385344.1 CDS CLB_3050 NC_009697.1 3189216 3189470 R identified by Glimmer3; hypothetical protein complement(3189216..3189470) Clostridium botulinum A str. ATCC 19397 5394968 YP_001385345.1 CDS CLB_3051 NC_009697.1 3189476 3191371 R hypothetical protein complement(3189476..3191371) Clostridium botulinum A str. ATCC 19397 5397776 YP_001385346.1 CDS CLB_3052 NC_009697.1 3191386 3192624 R hypothetical protein complement(3191386..3192624) Clostridium botulinum A str. ATCC 19397 5398016 YP_001385347.1 CDS CLB_3053 NC_009697.1 3192647 3193627 R hypothetical protein complement(3192647..3193627) Clostridium botulinum A str. ATCC 19397 5397104 YP_001385348.1 CDS CLB_3054 NC_009697.1 3193629 3194969 R identified by match to protein family HMM PF00656; hypothetical protein complement(3193629..3194969) Clostridium botulinum A str. ATCC 19397 5395962 YP_001385349.1 CDS CLB_3055 NC_009697.1 3194984 3195325 R hypothetical protein complement(3194984..3195325) Clostridium botulinum A str. ATCC 19397 5396958 YP_001385350.1 CDS CLB_3056 NC_009697.1 3195338 3196423 R hypothetical protein complement(3195338..3196423) Clostridium botulinum A str. ATCC 19397 5397612 YP_001385351.1 CDS CLB_3057 NC_009697.1 3196410 3196844 R identified by Glimmer3; hypothetical protein complement(3196410..3196844) Clostridium botulinum A str. ATCC 19397 5397546 YP_001385352.1 CDS CLB_3058 NC_009697.1 3196857 3198398 R identified by Glimmer3; hypothetical protein complement(3196857..3198398) Clostridium botulinum A str. ATCC 19397 5395349 YP_001385353.1 CDS CLB_3059 NC_009697.1 3198474 3198641 R identified by Glimmer3; hypothetical protein complement(3198474..3198641) Clostridium botulinum A str. ATCC 19397 5395238 YP_001385354.1 CDS CLB_3060 NC_009697.1 3198676 3199092 R hypothetical protein complement(3198676..3199092) Clostridium botulinum A str. ATCC 19397 5396810 YP_001385355.1 CDS CLB_3061 NC_009697.1 3199108 3199995 R hypothetical protein complement(3199108..3199995) Clostridium botulinum A str. ATCC 19397 5395272 YP_001385356.1 CDS CLB_3062 NC_009697.1 3200000 3200419 R hypothetical protein complement(3200000..3200419) Clostridium botulinum A str. ATCC 19397 5395245 YP_001385357.1 CDS CLB_3063 NC_009697.1 3200425 3200772 R hypothetical protein complement(3200425..3200772) Clostridium botulinum A str. ATCC 19397 5397096 YP_001385358.1 CDS CLB_3064 NC_009697.1 3200777 3201142 R hypothetical protein complement(3200777..3201142) Clostridium botulinum A str. ATCC 19397 5396267 YP_001385359.1 CDS CLB_3065 NC_009697.1 3201142 3201426 R identified by Glimmer3; hypothetical protein complement(3201142..3201426) Clostridium botulinum A str. ATCC 19397 5397643 YP_001385360.1 CDS CLB_3066 NC_009697.1 3202113 3202634 R hypothetical protein complement(3202113..3202634) Clostridium botulinum A str. ATCC 19397 5396739 YP_001385361.1 CDS CLB_3067 NC_009697.1 3202807 3203058 R hypothetical protein complement(3202807..3203058) Clostridium botulinum A str. ATCC 19397 5398082 YP_001385362.1 CDS CLB_3068 NC_009697.1 3203115 3203915 R hypothetical protein complement(3203115..3203915) Clostridium botulinum A str. ATCC 19397 5397220 YP_001385363.1 CDS CLB_3069 NC_009697.1 3203905 3204810 R identified by match to protein family HMM TIGR01714; phage replisome organizer complement(3203905..3204810) Clostridium botulinum A str. ATCC 19397 5396253 YP_001385364.1 CDS CLB_3070 NC_009697.1 3204904 3205116 R DNA-binding protein complement(3204904..3205116) Clostridium botulinum A str. ATCC 19397 5395822 YP_001385365.1 CDS CLB_3071 NC_009697.1 3205178 3205387 R identified by match to protein family HMM PF01381; DNA-binding protein complement(3205178..3205387) Clostridium botulinum A str. ATCC 19397 5394666 YP_001385366.1 CDS CLB_3072 NC_009697.1 3205579 3205989 D identified by match to protein family HMM PF01381; DNA-binding protein 3205579..3205989 Clostridium botulinum A str. ATCC 19397 5396124 YP_001385367.1 CDS CLB_3073 NC_009697.1 3206291 3206440 D identified by Glimmer3; hypothetical protein 3206291..3206440 Clostridium botulinum A str. ATCC 19397 5394745 YP_001385368.1 CDS CLB_3075 NC_009697.1 3207521 3209008 D identified by match to protein family HMM PF03062; alginate O-acetyltransferase AlgI 3207521..3209008 Clostridium botulinum A str. ATCC 19397 5396098 YP_001385369.1 CDS CLB_3076 NC_009697.1 3209021 3210472 D identified by Glimmer3; hypothetical protein 3209021..3210472 Clostridium botulinum A str. ATCC 19397 5396821 YP_001385370.1 CDS CLB_3077 NC_009697.1 3210644 3210847 R identified by match to protein family HMM PF00269; small, acid-soluble spore protein complement(3210644..3210847) Clostridium botulinum A str. ATCC 19397 5394591 YP_001385371.1 CDS CLB_3078 NC_009697.1 3211032 3211172 R identified by Glimmer3; hypothetical protein complement(3211032..3211172) Clostridium botulinum A str. ATCC 19397 5396467 YP_001385372.1 CDS CLB_3079 NC_009697.1 3211411 3211530 R identified by Glimmer3; hypothetical protein complement(3211411..3211530) Clostridium botulinum A str. ATCC 19397 5395073 YP_001385373.1 CDS CLB_3080 NC_009697.1 3211587 3211877 R identified by Glimmer3; hypothetical protein complement(3211587..3211877) Clostridium botulinum A str. ATCC 19397 5395389 YP_001385374.1 CDS CLB_3081 NC_009697.1 3212018 3212146 R identified by Glimmer3; hypothetical protein complement(3212018..3212146) Clostridium botulinum A str. ATCC 19397 5397928 YP_001385375.1 CDS CLB_3082 NC_009697.1 3212318 3212746 D identified by match to protein family HMM PF04246; sigma-E factor regulator 3212318..3212746 Clostridium botulinum A str. ATCC 19397 5394766 YP_001385376.1 CDS aspS NC_009697.1 3212781 3214562 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(3212781..3214562) Clostridium botulinum A str. ATCC 19397 5394649 YP_001385377.1 CDS hisS NC_009697.1 3214603 3215850 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(3214603..3215850) Clostridium botulinum A str. ATCC 19397 5394988 YP_001385378.1 CDS CLB_3085 NC_009697.1 3215869 3217299 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(3215869..3217299) Clostridium botulinum A str. ATCC 19397 5398201 YP_001385379.1 CDS CLB_3086 NC_009697.1 3217337 3217936 R identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein complement(3217337..3217936) Clostridium botulinum A str. ATCC 19397 5396726 YP_001385380.1 CDS dtd NC_009697.1 3217997 3218446 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(3217997..3218446) Clostridium botulinum A str. ATCC 19397 5395193 YP_001385381.1 CDS relA NC_009697.1 3218489 3220660 R identified by match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; GTP pyrophosphokinase complement(3218489..3220660) Clostridium botulinum A str. ATCC 19397 5395780 YP_001385382.1 CDS apt NC_009697.1 3220784 3221302 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(3220784..3221302) Clostridium botulinum A str. ATCC 19397 5397750 YP_001385383.1 CDS CLB_3090 NC_009697.1 3221411 3222289 R identified by match to protein family HMM PF01368; DHH domain-containing protein complement(3221411..3222289) Clostridium botulinum A str. ATCC 19397 5397077 YP_001385384.1 CDS secF NC_009697.1 3222518 3223381 R forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF complement(3222518..3223381) Clostridium botulinum A str. ATCC 19397 5394934 YP_001385385.1 CDS secD NC_009697.1 3223383 3224651 R part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD complement(3223383..3224651) Clostridium botulinum A str. ATCC 19397 5396720 YP_001385386.1 CDS CLB_3093 NC_009697.1 3224745 3226112 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(3224745..3226112) Clostridium botulinum A str. ATCC 19397 5398129 YP_001385387.1 CDS CLB_3094 NC_009697.1 3226269 3226406 R identified by Glimmer3; hypothetical protein complement(3226269..3226406) Clostridium botulinum A str. ATCC 19397 5396403 YP_001385388.1 CDS CLB_3095 NC_009697.1 3226496 3226864 R hypothetical protein complement(3226496..3226864) Clostridium botulinum A str. ATCC 19397 5396011 YP_001385389.1 CDS yajC NC_009697.1 3226919 3227254 R member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC complement(3226919..3227254) Clostridium botulinum A str. ATCC 19397 5396205 YP_001385390.1 CDS tgt NC_009697.1 3227434 3228564 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(3227434..3228564) Clostridium botulinum A str. ATCC 19397 5394736 YP_001385391.1 CDS queA NC_009697.1 3228620 3229645 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(3228620..3229645) Clostridium botulinum A str. ATCC 19397 5394829 YP_001385392.1 CDS ruvB NC_009697.1 3229679 3230707 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(3229679..3230707) Clostridium botulinum A str. ATCC 19397 5397983 YP_001385393.1 CDS ruvA NC_009697.1 3230727 3231320 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(3230727..3231320) Clostridium botulinum A str. ATCC 19397 5397741 YP_001385394.1 CDS CLB_3101 NC_009697.1 3231502 3232113 R hypothetical protein complement(3231502..3232113) Clostridium botulinum A str. ATCC 19397 5394779 YP_001385395.1 CDS CLB_3102 NC_009697.1 3232490 3233230 R identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033; hypothetical protein complement(3232490..3233230) Clostridium botulinum A str. ATCC 19397 5395637 YP_001385396.1 CDS CLB_3103 NC_009697.1 3233381 3234031 R identified by match to protein family HMM PF01205; match to protein family HMM PF09186; match to protein family HMM TIGR00257; hypothetical protein complement(3233381..3234031) Clostridium botulinum A str. ATCC 19397 5396536 YP_001385397.1 CDS CLB_3104 NC_009697.1 3234047 3234709 R identified by match to protein family HMM PF03130; PBS lyase complement(3234047..3234709) Clostridium botulinum A str. ATCC 19397 5397585 YP_001385398.1 CDS CLB_3105 NC_009697.1 3234797 3236215 R identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator complement(3234797..3236215) Clostridium botulinum A str. ATCC 19397 5395483 YP_001385399.1 CDS CLB_3106 NC_009697.1 3236501 3237394 R identified by match to protein family HMM PF01909; nucleotidyltransferase domain-containing protein complement(3236501..3237394) Clostridium botulinum A str. ATCC 19397 5398186 YP_001385400.1 CDS CLB_3107 NC_009697.1 3237544 3237765 R hypothetical protein complement(3237544..3237765) Clostridium botulinum A str. ATCC 19397 5396931 YP_001385401.1 CDS CLB_3108 NC_009697.1 3237938 3238096 R identified by match to protein family HMM PF00301; rubredoxin complement(3237938..3238096) Clostridium botulinum A str. ATCC 19397 5397552 YP_001385402.1 CDS CLB_3109 NC_009697.1 3238225 3240009 R identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR03156; GTP-binding protein complement(3238225..3240009) Clostridium botulinum A str. ATCC 19397 5395990 YP_001385403.1 CDS hpt-1 NC_009697.1 3240151 3240675 D identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203; hypoxanthine phosphoribosyltransferase 3240151..3240675 Clostridium botulinum A str. ATCC 19397 5395055 YP_001385404.1 CDS CLB_3111 NC_009697.1 3240712 3241266 R identified by match to protein family HMM TIGR02832; hypothetical protein complement(3240712..3241266) Clostridium botulinum A str. ATCC 19397 5396976 YP_001385405.1 CDS CLB_3112 NC_009697.1 3241538 3244030 D identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074; 1A family penicillin-binding protein 3241538..3244030 Clostridium botulinum A str. ATCC 19397 5395318 YP_001385406.1 CDS CLB_3113 NC_009697.1 3244060 3244416 R identified by match to protein family HMM PF03862; match to protein family HMM TIGR02839; SpoVA family protein complement(3244060..3244416) Clostridium botulinum A str. ATCC 19397 5396354 YP_001385407.1 CDS CLB_3114 NC_009697.1 3244432 3245439 R identified by match to protein family HMM PF07451; match to protein family HMM TIGR02845; stage V sporulation protein AD complement(3244432..3245439) Clostridium botulinum A str. ATCC 19397 5397962 YP_001385408.1 CDS CLB_3115 NC_009697.1 3245462 3245917 R identified by match to protein family HMM PF03862; match to protein family HMM TIGR02838; SpoVA family protein complement(3245462..3245917) Clostridium botulinum A str. ATCC 19397 5396015 YP_001385409.1 CDS sigF NC_009697.1 3246119 3246874 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the prespore at the onset of sporulation. Interaction with spoIIAB inhibits sigma F activity throughout the cell before the formation of the asymmetric septum; after septation the interaction is confined to the mother cell, and sigma F activity is released in the prespore.; sporulation sigma factor SigF complement(3246119..3246874) Clostridium botulinum A str. ATCC 19397 5397397 YP_001385410.1 CDS spoIIAB NC_009697.1 3246893 3247315 R binds to sigma F preventing its association with RNA polymerase during sporulation; anti-sigma F factor complement(3246893..3247315) Clostridium botulinum A str. ATCC 19397 5397413 YP_001385411.1 CDS spoIIAA NC_009697.1 3247332 3247667 R identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; match to protein family HMM TIGR02886; anti-sigma F factor antagonist complement(3247332..3247667) Clostridium botulinum A str. ATCC 19397 5394539 YP_001385412.1 CDS CLB_3119 NC_009697.1 3247968 3249701 R modification methylase family protein complement(3247968..3249701) Clostridium botulinum A str. ATCC 19397 5394740 YP_001385413.1 CDS CLB_3120 NC_009697.1 3249768 3250742 D identified by match to protein family HMM PF01522; match to protein family HMM TIGR02884; polysaccharide deacetylase 3249768..3250742 Clostridium botulinum A str. ATCC 19397 5397689 YP_001385414.1 CDS CLB_3121 NC_009697.1 3250831 3251547 R identified by match to protein family HMM PF03808; match to protein family HMM TIGR00696; WecB/TagA/CpsF family glycosyl transferase complement(3250831..3251547) Clostridium botulinum A str. ATCC 19397 5394919 YP_001385415.1 CDS CLB_3122 NC_009697.1 3251875 3252528 R identified by match to protein family HMM PF02397; sugar transferase complement(3251875..3252528) Clostridium botulinum A str. ATCC 19397 5396164 YP_001385416.1 CDS CLB_3123 NC_009697.1 3252549 3253973 R identified by match to protein family HMM PF01943; polysaccharide transporter complement(3252549..3253973) Clostridium botulinum A str. ATCC 19397 5394945 YP_001385417.1 CDS mviN NC_009697.1 3254371 3255927 R identified by match to protein family HMM PF01554; match to protein family HMM PF01943; match to protein family HMM PF03023; match to protein family HMM TIGR01695; integral membrane protein MviN complement(3254371..3255927) Clostridium botulinum A str. ATCC 19397 5397025 YP_001385418.1 CDS CLB_3125 NC_009697.1 3255946 3257049 R identified by match to protein family HMM PF00534; glycoside hydrolase family protein complement(3255946..3257049) Clostridium botulinum A str. ATCC 19397 5396449 YP_001385419.1 CDS CLB_3126 NC_009697.1 3257159 3258286 R identified by match to protein family HMM PF00534; glycoside hydrolase family protein complement(3257159..3258286) Clostridium botulinum A str. ATCC 19397 5396608 YP_001385420.1 CDS CLB_3127 NC_009697.1 3258401 3259633 R identified by match to protein family HMM PF04932; exopolysaccharide biosynthesis family protein complement(3258401..3259633) Clostridium botulinum A str. ATCC 19397 5397102 YP_001385421.1 CDS CLB_3128 NC_009697.1 3259711 3260937 R identified by match to protein family HMM PF00534; glycoside hydrolase family protein complement(3259711..3260937) Clostridium botulinum A str. ATCC 19397 5395988 YP_001385422.1 CDS CLB_3129 NC_009697.1 3260956 3262014 R identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236; UDP-N-acetylglucosamine 2-epimerase complement(3260956..3262014) Clostridium botulinum A str. ATCC 19397 5397341 YP_001385423.1 CDS CLB_3130 NC_009697.1 3262014 3263108 R identified by match to protein family HMM PF00534; glycoside hydrolase family protein complement(3262014..3263108) Clostridium botulinum A str. ATCC 19397 5398145 YP_001385424.1 CDS CLB_3131 NC_009697.1 3263131 3264234 R identified by Glimmer3; hypothetical protein complement(3263131..3264234) Clostridium botulinum A str. ATCC 19397 5397495 YP_001385425.1 CDS CLB_3132 NC_009697.1 3264224 3265642 R hypothetical protein complement(3264224..3265642) Clostridium botulinum A str. ATCC 19397 5394714 YP_001385426.1 CDS CLB_3133 NC_009697.1 3265657 3266751 R identified by match to protein family HMM PF00560; internalin complement(3265657..3266751) Clostridium botulinum A str. ATCC 19397 5396997 YP_001385427.1 CDS CLB_3134 NC_009697.1 3266788 3268095 R identified by match to protein family HMM PF01554; match to protein family HMM PF01943; polysaccharide biosynthesis protein complement(3266788..3268095) Clostridium botulinum A str. ATCC 19397 5396146 YP_001385428.1 CDS CLB_3135 NC_009697.1 3268126 3268872 R identified by match to protein family HMM PF00132; acetyltransferase complement(3268126..3268872) Clostridium botulinum A str. ATCC 19397 5394672 YP_001385429.1 CDS CLB_3136 NC_009697.1 3268972 3270081 R identified by match to protein family HMM PF01408; match to protein family HMM PF02894; NAD-binding Rossmann fold family oxidoreductase complement(3268972..3270081) Clostridium botulinum A str. ATCC 19397 5397141 YP_001385430.1 CDS CLB_3137 NC_009697.1 3270144 3271460 R identified by match to protein family HMM PF00984; match to protein family HMM PF03446; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026; UDP-glucose/GDP-mannose dehydrogenase family protein complement(3270144..3271460) Clostridium botulinum A str. ATCC 19397 5395319 YP_001385431.1 CDS CLB_3138 NC_009697.1 3271590 3273455 R identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; exopolysaccharide biosynthesis protein complement(3271590..3273455) Clostridium botulinum A str. ATCC 19397 5396036 YP_001385432.1 CDS CLB_3139 NC_009697.1 3273636 3276527 R identified by match to protein family HMM PF01520; match to protein family HMM PF07495; N-acetylmuramoyl-L-alanine amidase complement(3273636..3276527) Clostridium botulinum A str. ATCC 19397 5398060 YP_001385433.1 CDS CLB_3140 NC_009697.1 3276722 3279625 R identified by match to protein family HMM PF01520; match to protein family HMM PF07495; N-acetylmuramoyl-L-alanine amidase complement(3276722..3279625) Clostridium botulinum A str. ATCC 19397 5395543 YP_001385434.1 CDS CLB_3141 NC_009697.1 3279694 3279828 R identified by Glimmer3; hypothetical protein complement(3279694..3279828) Clostridium botulinum A str. ATCC 19397 5396542 YP_001385435.1 CDS CLB_3142 NC_009697.1 3279809 3283273 R identified by match to protein family HMM PF01832; match to protein family HMM PF07495; beta-N-acetylglucosaminidase complement(3279809..3283273) Clostridium botulinum A str. ATCC 19397 5397780 YP_001385436.1 CDS galU NC_009697.1 3283372 3284268 R identified by match to protein family HMM PF00483; match to protein family HMM TIGR01099; UTP-glucose-1-phosphate uridylyltransferase complement(3283372..3284268) Clostridium botulinum A str. ATCC 19397 5395123 YP_001385437.1 CDS CLB_3144 NC_009697.1 3284318 3285394 R identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein complement(3284318..3285394) Clostridium botulinum A str. ATCC 19397 5397672 YP_001385438.1 CDS CLB_3145 NC_009697.1 3285539 3287266 R identified by match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphoglucomutase/phosphomannomutase family protein complement(3285539..3287266) Clostridium botulinum A str. ATCC 19397 5397920 YP_001385439.1 CDS CLB_3146 NC_009697.1 3288252 3288788 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 complement(3288252..3288788) Clostridium botulinum A str. ATCC 19397 5397166 YP_001385440.1 CDS CLB_3147 NC_009697.1 3288995 3290455 D identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM PF01276; match to protein family HMM PF03711; match to protein family HMM PF05889; Orn/Lys/Arg decarboxylase 3288995..3290455 Clostridium botulinum A str. ATCC 19397 5395182 YP_001385441.1 CDS CLB_3148 NC_009697.1 3290640 3291473 R identified by Glimmer3; hypothetical protein complement(3290640..3291473) Clostridium botulinum A str. ATCC 19397 5394720 YP_001385442.1 CDS CLB_3149 NC_009697.1 3291671 3292573 R identified by match to protein family HMM PF01515; phosphate acetyl/butyryl transferase complement(3291671..3292573) Clostridium botulinum A str. ATCC 19397 5395057 YP_001385443.1 CDS CLB_3150 NC_009697.1 3293017 3294030 R identified by match to protein family HMM PF01070; match to protein family HMM PF01180; dehydrogenase, FMN-dependent complement(3293017..3294030) Clostridium botulinum A str. ATCC 19397 5396983 YP_001385444.1 CDS CLB_3151 NC_009697.1 3294266 3294736 R identified by match to protein family HMM PF04463; hypothetical protein complement(3294266..3294736) Clostridium botulinum A str. ATCC 19397 5397915 YP_001385445.1 CDS CLB_3152 NC_009697.1 3294924 3297290 R MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein complement(3294924..3297290) Clostridium botulinum A str. ATCC 19397 5397636 YP_001385446.1 CDS CLB_3153 NC_009697.1 3297423 3299789 R identified by match to protein family HMM PF01136; U32 family peptidase complement(3297423..3299789) Clostridium botulinum A str. ATCC 19397 5396551 YP_001385447.1 CDS CLB_3154 NC_009697.1 3300363 3301241 R hypothetical protein complement(3300363..3301241) Clostridium botulinum A str. ATCC 19397 5396582 YP_001385448.1 CDS CLB_3155 NC_009697.1 3301447 3303273 D identified by Glimmer3; hypothetical protein 3301447..3303273 Clostridium botulinum A str. ATCC 19397 5396525 YP_001385449.1 CDS CLB_3156 NC_009697.1 3303444 3303596 R identified by Glimmer3; hypothetical protein complement(3303444..3303596) Clostridium botulinum A str. ATCC 19397 5397308 YP_001385450.1 CDS CLB_3157 NC_009697.1 3303776 3304042 R identified by Glimmer3; hypothetical protein complement(3303776..3304042) Clostridium botulinum A str. ATCC 19397 5396615 YP_001385451.1 CDS CLB_3159 NC_009697.1 3304893 3305483 R identified by match to protein family HMM PF05164; hypothetical protein complement(3304893..3305483) Clostridium botulinum A str. ATCC 19397 5396367 YP_001385452.1 CDS pheT NC_009697.1 3305688 3308069 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(3305688..3308069) Clostridium botulinum A str. ATCC 19397 5397230 YP_001385453.1 CDS pheS NC_009697.1 3308230 3309249 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(3308230..3309249) Clostridium botulinum A str. ATCC 19397 5397608 YP_001385454.1 CDS CLB_3162 NC_009697.1 3309597 3310376 R identified by match to protein family HMM PF00588; match to protein family HMM PF08032; RNA methyltransferase complement(3309597..3310376) Clostridium botulinum A str. ATCC 19397 5396539 YP_001385455.1 CDS CLB_3163 NC_009697.1 3310467 3311129 R identified by match to protein family HMM PF02080; match to protein family HMM PF02254; TrkA family potassium uptake protein complement(3310467..3311129) Clostridium botulinum A str. ATCC 19397 5394692 YP_001385456.1 CDS CLB_3164 NC_009697.1 3311140 3312483 R identified by match to protein family HMM PF02386; match to protein family HMM TIGR00933; TrkH family potassium uptake protein complement(3311140..3312483) Clostridium botulinum A str. ATCC 19397 5397059 YP_001385457.1 CDS rplT NC_009697.1 3312607 3312966 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(3312607..3312966) Clostridium botulinum A str. ATCC 19397 5398143 YP_001385458.1 CDS rpmI NC_009697.1 3312996 3313193 R identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; 50S ribosomal protein L35 complement(3312996..3313193) Clostridium botulinum A str. ATCC 19397 5394805 YP_001385459.1 CDS infC NC_009697.1 3313215 3313769 R IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 complement(3313215..3313769) Clostridium botulinum A str. ATCC 19397 5396176 YP_001385460.1 CDS thrS NC_009697.1 3314024 3315931 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(3314024..3315931) Clostridium botulinum A str. ATCC 19397 5396619 YP_001385461.1 CDS CLB_3169 NC_009697.1 3316279 3317178 R identified by match to protein family HMM PF08812; match to protein family HMM TIGR02834; hypothetical protein complement(3316279..3317178) Clostridium botulinum A str. ATCC 19397 5397053 YP_001385462.1 CDS CLB_3170 NC_009697.1 3317333 3318040 D hypothetical protein 3317333..3318040 Clostridium botulinum A str. ATCC 19397 5396963 YP_001385463.1 CDS CLB_3171 NC_009697.1 3318248 3319819 R ABC transporter permease complement(3318248..3319819) Clostridium botulinum A str. ATCC 19397 5396844 YP_001385464.1 CDS CLB_3172 NC_009697.1 3319821 3320516 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(3319821..3320516) Clostridium botulinum A str. ATCC 19397 5397200 YP_001385465.1 CDS hslO NC_009697.1 3321423 3322313 R becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin complement(3321423..3322313) Clostridium botulinum A str. ATCC 19397 5395163 YP_001385466.1 CDS CLB_3179 NC_009697.1 3322351 3323091 R identified by match to protein family HMM PF08241; match to protein family HMM PF08242; hypothetical protein complement(3322351..3323091) Clostridium botulinum A str. ATCC 19397 5395889 YP_001385467.1 CDS CLB_3180 NC_009697.1 3323177 3323449 R small acid-soluble spore protein complement(3323177..3323449) Clostridium botulinum A str. ATCC 19397 5395677 YP_001385468.1 CDS CLB_3181 NC_009697.1 3323748 3324707 R identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; oligopeptide/dipeptide ABC transporter ATP-binding protein complement(3323748..3324707) Clostridium botulinum A str. ATCC 19397 5397879 YP_001385469.1 CDS CLB_3182 NC_009697.1 3324707 3325726 R identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; oligopeptide/dipeptide ABC transporter ATP-binding protein complement(3324707..3325726) Clostridium botulinum A str. ATCC 19397 5395382 YP_001385470.1 CDS CLB_3183 NC_009697.1 3325740 3326657 R identified by match to protein family HMM PF00528; oligopeptide/dipeptide ABC transporter permease complement(3325740..3326657) Clostridium botulinum A str. ATCC 19397 5394583 YP_001385471.1 CDS CLB_3184 NC_009697.1 3326673 3327602 R identified by match to protein family HMM PF00528; oligopeptide/dipeptide ABC transporter permease complement(3326673..3327602) Clostridium botulinum A str. ATCC 19397 5394880 YP_001385472.1 CDS CLB_3185 NC_009697.1 3327683 3329365 R identified by match to protein family HMM PF00496; oligopeptide/dipeptide ABC transporter oligopeptide/dipeptide-binding protein complement(3327683..3329365) Clostridium botulinum A str. ATCC 19397 5395327 YP_001385473.1 CDS asd NC_009697.1 3329850 3330842 D identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR01296; aspartate-semialdehyde dehydrogenase 3329850..3330842 Clostridium botulinum A str. ATCC 19397 5394595 YP_001385474.1 CDS dapA NC_009697.1 3330865 3331743 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 3330865..3331743 Clostridium botulinum A str. ATCC 19397 5397783 YP_001385475.1 CDS dapB-2 NC_009697.1 3331966 3332721 D catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 3331966..3332721 Clostridium botulinum A str. ATCC 19397 5395722 YP_001385476.1 CDS CLB_3189 NC_009697.1 3333261 3334430 R identified by match to protein family HMM PF00155; aminotransferase, classes I and II complement(3333261..3334430) Clostridium botulinum A str. ATCC 19397 5395136 YP_001385477.1 CDS CLB_3190 NC_009697.1 3334440 3334556 R identified by Glimmer3; hypothetical protein complement(3334440..3334556) Clostridium botulinum A str. ATCC 19397 5395997 YP_001385478.1 CDS CLB_3191 NC_009697.1 3334688 3335398 D identified by match to protein family HMM PF00132; match to protein family HMM PF08503; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3334688..3335398 Clostridium botulinum A str. ATCC 19397 5394999 YP_001385479.1 CDS CLB_3192 NC_009697.1 3335514 3336215 R binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein complement(3335514..3336215) Clostridium botulinum A str. ATCC 19397 5395243 YP_001385480.1 CDS CLB_3193 NC_009697.1 3336293 3336790 R hypothetical protein complement(3336293..3336790) Clostridium botulinum A str. ATCC 19397 5397598 YP_001385481.1 CDS CLB_3194 NC_009697.1 3336989 3337741 R identified by match to protein family HMM PF01522; match to protein family HMM TIGR02764; polysaccharide deacetylase complement(3336989..3337741) Clostridium botulinum A str. ATCC 19397 5397441 YP_001385482.1 CDS CLB_3195 NC_009697.1 3337905 3338432 D hypothetical protein 3337905..3338432 Clostridium botulinum A str. ATCC 19397 5395536 YP_001385483.1 CDS CLB_3196 NC_009697.1 3338435 3339319 R hypothetical protein complement(3338435..3339319) Clostridium botulinum A str. ATCC 19397 5396688 YP_001385484.1 CDS CLB_3197 NC_009697.1 3339459 3339719 D hypothetical protein 3339459..3339719 Clostridium botulinum A str. ATCC 19397 5395845 YP_001385485.1 CDS folC NC_009697.1 3339728 3341017 R identified by match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01499; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(3339728..3341017) Clostridium botulinum A str. ATCC 19397 5396940 YP_001385486.1 CDS valS NC_009697.1 3341463 3344108 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(3341463..3344108) Clostridium botulinum A str. ATCC 19397 5397669 YP_001385487.1 CDS CLB_3200 NC_009697.1 3344129 3344635 R identified by match to protein family HMM PF00583; acetyltransferase complement(3344129..3344635) Clostridium botulinum A str. ATCC 19397 5396433 YP_001385488.1 CDS CLB_3201 NC_009697.1 3345089 3345844 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(3345089..3345844) Clostridium botulinum A str. ATCC 19397 5396633 YP_001385489.1 CDS CLB_3202 NC_009697.1 3345847 3347115 R ABC transporter permease complement(3345847..3347115) Clostridium botulinum A str. ATCC 19397 5395660 YP_001385490.1 CDS CLB_3203 NC_009697.1 3347573 3348181 R lipoprotein complement(3347573..3348181) Clostridium botulinum A str. ATCC 19397 5394664 YP_001385491.1 CDS CLB_3204 NC_009697.1 3348603 3349631 D identified by match to protein family HMM PF09084; ABC transporter substrate-binding protein 3348603..3349631 Clostridium botulinum A str. ATCC 19397 5395480 YP_001385492.1 CDS CLB_3205 NC_009697.1 3349832 3349963 D identified by Glimmer3; hypothetical protein 3349832..3349963 Clostridium botulinum A str. ATCC 19397 5395544 YP_001385493.1 CDS CLB_3206 NC_009697.1 3349992 3354284 R identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; CoA-substrate-specific enzyme activase complement(3349992..3354284) Clostridium botulinum A str. ATCC 19397 5397728 YP_001385494.1 CDS CLB_3207 NC_009697.1 3354606 3355367 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3354606..3355367 Clostridium botulinum A str. ATCC 19397 5397380 YP_001385495.1 CDS CLB_3208 NC_009697.1 3355364 3356167 D identified by match to protein family HMM PF00528; ABC transporter permease 3355364..3356167 Clostridium botulinum A str. ATCC 19397 5397191 YP_001385496.1 CDS CLB_3209 NC_009697.1 3356311 3356658 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07720; hypothetical protein 3356311..3356658 Clostridium botulinum A str. ATCC 19397 5397462 YP_001385497.1 CDS CLB_3210 NC_009697.1 3356781 3357956 R identified by match to protein family HMM PF01841; transglutaminase domain-containing protein complement(3356781..3357956) Clostridium botulinum A str. ATCC 19397 5394785 YP_001385498.1 CDS recX NC_009697.1 3357981 3358916 R binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX complement(3357981..3358916) Clostridium botulinum A str. ATCC 19397 5397356 YP_001385499.1 CDS CLB_3212 NC_009697.1 3358938 3360167 R identified by match to protein family HMM PF00675; match to protein family HMM PF05193; M16 family peptidase complement(3358938..3360167) Clostridium botulinum A str. ATCC 19397 5398005 YP_001385500.1 CDS CLB_3213 NC_009697.1 3360388 3360891 D identified by match to protein family HMM PF06177; hypothetical protein 3360388..3360891 Clostridium botulinum A str. ATCC 19397 5397505 YP_001385501.1 CDS CLB_3214 NC_009697.1 3360929 3361516 D identified by match to protein family HMM PF01613; flavin reductase 3360929..3361516 Clostridium botulinum A str. ATCC 19397 5395878 YP_001385502.1 CDS CLB_3215 NC_009697.1 3361573 3362268 D identified by match to protein family HMM PF01471; match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 3361573..3362268 Clostridium botulinum A str. ATCC 19397 5395546 YP_001385503.1 CDS CLB_3216 NC_009697.1 3362303 3363178 R hypothetical protein complement(3362303..3363178) Clostridium botulinum A str. ATCC 19397 5396397 YP_001385504.1 CDS CLB_3217 NC_009697.1 3363220 3363498 R identified by match to protein family HMM PF06865; hypothetical protein complement(3363220..3363498) Clostridium botulinum A str. ATCC 19397 5397646 YP_001385505.1 CDS proC NC_009697.1 3363626 3364432 R catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase complement(3363626..3364432) Clostridium botulinum A str. ATCC 19397 5396302 YP_001385506.1 CDS CLB_3219 NC_009697.1 3364544 3366907 R identified by match to protein family HMM PF01228; match to protein family HMM PF02901; formate acetyltransferase complement(3364544..3366907) Clostridium botulinum A str. ATCC 19397 5395933 YP_001385507.1 CDS CLB_3220 NC_009697.1 3366914 3367816 R identified by match to protein family HMM PF00037; match to protein family HMM PF04055; match to protein family HMM TIGR02494; glycyl-radical enzyme activating family protein complement(3366914..3367816) Clostridium botulinum A str. ATCC 19397 5395176 YP_001385508.1 CDS CLB_3221 NC_009697.1 3367880 3368449 R identified by match to protein family HMM PF01381; match to protein family HMM PF07883; DNA-binding protein complement(3367880..3368449) Clostridium botulinum A str. ATCC 19397 5397965 YP_001385509.1 CDS CLB_3222 NC_009697.1 3369084 3369812 R identified by match to protein family HMM PF00533; hypothetical protein complement(3369084..3369812) Clostridium botulinum A str. ATCC 19397 5394693 YP_001385510.1 CDS CLB_3223 NC_009697.1 3369849 3370190 R identified by Glimmer3; hypothetical protein complement(3369849..3370190) Clostridium botulinum A str. ATCC 19397 5395754 YP_001385511.1 CDS CLB_3224 NC_009697.1 3370202 3371938 R identified by match to protein family HMM PF00092; von Willebrand factor A complement(3370202..3371938) Clostridium botulinum A str. ATCC 19397 5397147 YP_001385512.1 CDS CLB_3225 NC_009697.1 3371961 3373289 R identified by match to protein family HMM PF07728; ATPase AAA complement(3371961..3373289) Clostridium botulinum A str. ATCC 19397 5396399 YP_001385513.1 CDS CLB_3226 NC_009697.1 3373912 3374988 D hypothetical protein 3373912..3374988 Clostridium botulinum A str. ATCC 19397 5396037 YP_001385514.1 CDS CLB_3227 NC_009697.1 3375057 3376142 D hypothetical protein 3375057..3376142 Clostridium botulinum A str. ATCC 19397 5397106 YP_001385515.1 CDS CLB_3228 NC_009697.1 3376321 3376515 R identified by match to protein family HMM PF00037; (Fe-S)-binding protein complement(3376321..3376515) Clostridium botulinum A str. ATCC 19397 5394747 YP_001385516.1 CDS CLB_3229 NC_009697.1 3376758 3377651 D hypothetical protein 3376758..3377651 Clostridium botulinum A str. ATCC 19397 5397930 YP_001385517.1 CDS CLB_3230 NC_009697.1 3377654 3378751 D R-2-hydroxyglutaryl-CoA dehydratase subunit 3377654..3378751 Clostridium botulinum A str. ATCC 19397 5397767 YP_001385518.1 CDS CLB_3231 NC_009697.1 3378732 3379706 D identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; CoA-substrate-specific enzyme activase 3378732..3379706 Clostridium botulinum A str. ATCC 19397 5396702 YP_001385519.1 CDS CLB_3232 NC_009697.1 3379775 3381403 R identified by match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent transcriptional regulator complement(3379775..3381403) Clostridium botulinum A str. ATCC 19397 5395431 YP_001385520.1 CDS CLB_3233 NC_009697.1 3381761 3382768 R identified by match to protein family HMM PF00766; match to protein family HMM PF01012; electron transfer flavoprotein subunit alpha/FixB family protein complement(3381761..3382768) Clostridium botulinum A str. ATCC 19397 5396248 YP_001385521.1 CDS CLB_3234 NC_009697.1 3382781 3383560 R identified by match to protein family HMM PF01012; electron transfer flavoprotein subunit beta/FixA family protein complement(3382781..3383560) Clostridium botulinum A str. ATCC 19397 5396780 YP_001385522.1 CDS bcd NC_009697.1 3383572 3384711 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; butyryl-CoA dehydrogenase complement(3383572..3384711) Clostridium botulinum A str. ATCC 19397 5396138 YP_001385523.1 CDS CLB_3236 NC_009697.1 3384905 3386083 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase complement(3384905..3386083) Clostridium botulinum A str. ATCC 19397 5395902 YP_001385524.1 CDS hbd NC_009697.1 3386108 3386938 R identified by match to protein family HMM PF00725; match to protein family HMM PF02737; 3-hydroxybutyryl-CoA dehydrogenase complement(3386108..3386938) Clostridium botulinum A str. ATCC 19397 5396090 YP_001385525.1 CDS crt NC_009697.1 3386969 3387751 R identified by match to protein family HMM PF00378; 3-hydroxybutyryl-CoA dehydratase complement(3386969..3387751) Clostridium botulinum A str. ATCC 19397 5395250 YP_001385526.1 CDS CLB_3239 NC_009697.1 3388167 3388385 R identified by Glimmer3; hypothetical protein complement(3388167..3388385) Clostridium botulinum A str. ATCC 19397 5397144 YP_001385527.1 CDS CLB_3240 NC_009697.1 3388429 3389526 R identified by match to protein family HMM PF01541; GIY-YIG domain-containing protein complement(3388429..3389526) Clostridium botulinum A str. ATCC 19397 5397133 YP_001385528.1 CDS CLB_3241 NC_009697.1 3389802 3391094 R identified by match to protein family HMM PF00860; xanthine/uracil permease family protein complement(3389802..3391094) Clostridium botulinum A str. ATCC 19397 5395206 YP_001385529.1 CDS CLB_3242 NC_009697.1 3391496 3392392 R identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; HDIG domain-containing protein complement(3391496..3392392) Clostridium botulinum A str. ATCC 19397 5397018 YP_001385530.1 CDS CLB_3243 NC_009697.1 3392460 3392612 R identified by Glimmer3; hypothetical protein complement(3392460..3392612) Clostridium botulinum A str. ATCC 19397 5398020 YP_001385531.1 CDS CLB_3244 NC_009697.1 3392777 3392896 R identified by Glimmer3; hypothetical protein complement(3392777..3392896) Clostridium botulinum A str. ATCC 19397 5394849 YP_001385532.1 CDS lgt NC_009697.1 3392998 3393762 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(3392998..3393762) Clostridium botulinum A str. ATCC 19397 5395226 YP_001385533.1 CDS CLB_3246 NC_009697.1 3393971 3394435 R identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040; phosphodiesterase complement(3393971..3394435) Clostridium botulinum A str. ATCC 19397 5394983 YP_001385534.1 CDS CLB_3247 NC_009697.1 3394478 3394843 R hypothetical protein complement(3394478..3394843) Clostridium botulinum A str. ATCC 19397 5396411 YP_001385535.1 CDS CLB_3248 NC_009697.1 3394974 3395729 D identified by match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase family protein 3394974..3395729 Clostridium botulinum A str. ATCC 19397 5397684 YP_001385536.1 CDS CLB_3249 NC_009697.1 3395825 3397831 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein complement(3395825..3397831) Clostridium botulinum A str. ATCC 19397 5394803 YP_001385537.1 CDS CLB_3250 NC_009697.1 3398026 3398571 R identified by match to protein family HMM PF00301; match to protein family HMM PF02915; rubredoxin/rubrerythrin complement(3398026..3398571) Clostridium botulinum A str. ATCC 19397 5396185 YP_001385538.1 CDS pflA NC_009697.1 3399213 3399911 R identified by match to protein family HMM PF04055; match to protein family HMM TIGR02493; pyruvate formate-lyase activating enzyme complement(3399213..3399911) Clostridium botulinum A str. ATCC 19397 5396233 YP_001385539.1 CDS pfl NC_009697.1 3400091 3402319 R identified by match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01255; formate acetyltransferase 1 complement(3400091..3402319) Clostridium botulinum A str. ATCC 19397 5395578 YP_001385540.1 CDS CLB_3253 NC_009697.1 3402831 3403082 R hypothetical protein complement(3402831..3403082) Clostridium botulinum A str. ATCC 19397 5395678 YP_001385541.1 CDS CLB_3254 NC_009697.1 3403510 3404079 R identified by match to protein family HMM PF01386; match to protein family HMM TIGR00731; ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 complement(3403510..3404079) Clostridium botulinum A str. ATCC 19397 5394796 YP_001385542.1 CDS CLB_3255 NC_009697.1 3404246 3404860 R lipoprotein complement(3404246..3404860) Clostridium botulinum A str. ATCC 19397 5395410 YP_001385543.1 CDS CLB_3256 NC_009697.1 3405086 3405514 D identified by match to protein family HMM PF01475; FUR family transcriptional regulator 3405086..3405514 Clostridium botulinum A str. ATCC 19397 5395598 YP_001385544.1 CDS CLB_3257 NC_009697.1 3405583 3406818 R identified by match to protein family HMM PF01547; extracellular solute-binding protein complement(3405583..3406818) Clostridium botulinum A str. ATCC 19397 5397354 YP_001385545.1 CDS CLB_3258 NC_009697.1 3406919 3407854 D hypothetical protein 3406919..3407854 Clostridium botulinum A str. ATCC 19397 5397242 YP_001385546.1 CDS CLB_3259 NC_009697.1 3408014 3408970 R identified by match to protein family HMM PF08279; hypothetical protein complement(3408014..3408970) Clostridium botulinum A str. ATCC 19397 5395422 YP_001385547.1 CDS CLB_3260 NC_009697.1 3409185 3409595 R hypothetical protein complement(3409185..3409595) Clostridium botulinum A str. ATCC 19397 5395227 YP_001385548.1 CDS CLB_3261 NC_009697.1 3409650 3409895 R identified by Glimmer3; hypothetical protein complement(3409650..3409895) Clostridium botulinum A str. ATCC 19397 5398115 YP_001385549.1 CDS CLB_3262 NC_009697.1 3409947 3410375 R identified by Glimmer3; hypothetical protein complement(3409947..3410375) Clostridium botulinum A str. ATCC 19397 5395683 YP_001385550.1 CDS CLB_3263 NC_009697.1 3410594 3411319 R identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein complement(3410594..3411319) Clostridium botulinum A str. ATCC 19397 5396125 YP_001385551.1 CDS engB NC_009697.1 3411343 3411927 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(3411343..3411927) Clostridium botulinum A str. ATCC 19397 5396754 YP_001385552.1 CDS lon NC_009697.1 3411942 3414263 R identified by match to protein family HMM PF00004; match to protein family HMM PF02190; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR00763; ATP-dependent protease La complement(3411942..3414263) Clostridium botulinum A str. ATCC 19397 5396428 YP_001385553.1 CDS lonB NC_009697.1 3414401 3416080 R identified by match to protein family HMM PF00004; match to protein family HMM PF01078; match to protein family HMM PF05362; match to protein family HMM TIGR02902; ATP-dependent protease LonB complement(3414401..3416080) Clostridium botulinum A str. ATCC 19397 5396299 YP_001385554.1 CDS clpX NC_009697.1 3416208 3417497 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(3416208..3417497) Clostridium botulinum A str. ATCC 19397 5395069 YP_001385555.1 CDS clpP NC_009697.1 3417517 3418101 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(3417517..3418101) Clostridium botulinum A str. ATCC 19397 5395494 YP_001385556.1 CDS tig NC_009697.1 3418227 3419519 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(3418227..3419519) Clostridium botulinum A str. ATCC 19397 5397214 YP_001385557.1 CDS CLB_3270 NC_009697.1 3419697 3420482 R identified by match to protein family HMM PF01261; AP endonuclease complement(3419697..3420482) Clostridium botulinum A str. ATCC 19397 5394677 YP_001385558.1 CDS CLB_3271 NC_009697.1 3420589 3421401 R hypothetical protein complement(3420589..3421401) Clostridium botulinum A str. ATCC 19397 5395635 YP_001385559.1 CDS pyrE NC_009697.1 3421615 3422190 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(3421615..3422190) Clostridium botulinum A str. ATCC 19397 5394728 YP_001385560.1 CDS pyrD NC_009697.1 3422224 3423120 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B complement(3422224..3423120) Clostridium botulinum A str. ATCC 19397 5396724 YP_001385561.1 CDS pyrK NC_009697.1 3423120 3423875 R responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+); dihydroorotate dehydrogenase electron transfer subunit complement(3423120..3423875) Clostridium botulinum A str. ATCC 19397 5394797 YP_001385562.1 CDS pyrF NC_009697.1 3424020 3424871 R type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(3424020..3424871) Clostridium botulinum A str. ATCC 19397 5394542 YP_001385563.1 CDS pyrC NC_009697.1 3424895 3426085 R identified by match to protein family HMM PF01979; match to protein family HMM TIGR00857; dihydroorotase, multifunctional complex type complement(3424895..3426085) Clostridium botulinum A str. ATCC 19397 5397664 YP_001385564.1 CDS pyrI NC_009697.1 3426107 3426547 R involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase complement(3426107..3426547) Clostridium botulinum A str. ATCC 19397 5395465 YP_001385565.1 CDS pyrB NC_009697.1 3426549 3427472 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase complement(3426549..3427472) Clostridium botulinum A str. ATCC 19397 5396028 YP_001385566.1 CDS CLB_3279 NC_009697.1 3427727 3428485 R identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; CoA-substrate-specific enzyme activase complement(3427727..3428485) Clostridium botulinum A str. ATCC 19397 5397113 YP_001385567.1 CDS CLB_3280 NC_009697.1 3428508 3428705 R hypothetical protein complement(3428508..3428705) Clostridium botulinum A str. ATCC 19397 5396127 YP_001385568.1 CDS CLB_3281 NC_009697.1 3429065 3430324 R identified by match to protein family HMM PF06050; R-2-hydroxyglutaryl-CoA dehydratase subunit complement(3429065..3430324) Clostridium botulinum A str. ATCC 19397 5396670 YP_001385569.1 CDS CLB_3282 NC_009697.1 3430453 3431601 R identified by match to protein family HMM PF06050; R-2-hydroxyglutaryl-CoA dehydratase subunit complement(3430453..3431601) Clostridium botulinum A str. ATCC 19397 5397996 YP_001385570.1 CDS CLB_3283 NC_009697.1 3431713 3432045 R hypothetical protein complement(3431713..3432045) Clostridium botulinum A str. ATCC 19397 5395968 YP_001385571.1 CDS CLB_3284 NC_009697.1 3432082 3432840 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(3432082..3432840) Clostridium botulinum A str. ATCC 19397 5396789 YP_001385572.1 CDS CLB_3287 NC_009697.1 3433607 3434143 R identified by similarity to GB:CAJ69248.1; hypothetical protein complement(3433607..3434143) Clostridium botulinum A str. ATCC 19397 5394548 YP_001385573.1 CDS CLB_3288 NC_009697.1 3434195 3434413 R identified by Glimmer3; hypothetical protein complement(3434195..3434413) Clostridium botulinum A str. ATCC 19397 5394749 YP_001385574.1 CDS CLB_3289 NC_009697.1 3434422 3434562 R identified by Glimmer3; hypothetical protein complement(3434422..3434562) Clostridium botulinum A str. ATCC 19397 5397521 YP_001385575.1 CDS CLB_3290 NC_009697.1 3434569 3435135 R hypothetical protein complement(3434569..3435135) Clostridium botulinum A str. ATCC 19397 5398105 YP_001385576.1 CDS CLB_3291 NC_009697.1 3435163 3436263 R lipoprotein complement(3435163..3436263) Clostridium botulinum A str. ATCC 19397 5395352 YP_001385577.1 CDS CLB_3292 NC_009697.1 3436281 3436745 R lipoprotein complement(3436281..3436745) Clostridium botulinum A str. ATCC 19397 5396635 YP_001385578.1 CDS CLB_3293 NC_009697.1 3436761 3437852 R identified by match to protein family HMM PF03773; permease complement(3436761..3437852) Clostridium botulinum A str. ATCC 19397 5396820 YP_001385579.1 CDS CLB_3294 NC_009697.1 3437852 3438112 R identified by Glimmer3; hypothetical protein complement(3437852..3438112) Clostridium botulinum A str. ATCC 19397 5396174 YP_001385580.1 CDS CLB_3317 NC_009697.1 3440670 3441140 R identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040; phosphodiesterase complement(3440670..3441140) Clostridium botulinum A str. ATCC 19397 5395614 YP_001385581.1 CDS CLB_3318 NC_009697.1 3441157 3441756 R HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase complement(3441157..3441756) Clostridium botulinum A str. ATCC 19397 5398050 YP_001385582.1 CDS CLB_3319 NC_009697.1 3441860 3443233 D hypothetical protein 3441860..3443233 Clostridium botulinum A str. ATCC 19397 5395714 YP_001385583.1 CDS CLB_3320 NC_009697.1 3443346 3443501 D identified by similarity to GB:AAM23887.1; hypothetical protein 3443346..3443501 Clostridium botulinum A str. ATCC 19397 5396348 YP_001385584.1 CDS CLB_3321 NC_009697.1 3443504 3445066 R identified by match to protein family HMM PF00496; solute-binding family 5 protein complement(3443504..3445066) Clostridium botulinum A str. ATCC 19397 5395103 YP_001385585.1 CDS gatB NC_009697.1 3445220 3446650 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(3445220..3446650) Clostridium botulinum A str. ATCC 19397 5395604 YP_001385586.1 CDS gatA NC_009697.1 3446686 3448143 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(3446686..3448143) Clostridium botulinum A str. ATCC 19397 5395335 YP_001385587.1 CDS gatC NC_009697.1 3448180 3448467 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C complement(3448180..3448467) Clostridium botulinum A str. ATCC 19397 5396086 YP_001385588.1 CDS CLB_3325 NC_009697.1 3448602 3449813 R identified by match to protein family HMM PF00375; sodium:dicarboxylate symporter family protein complement(3448602..3449813) Clostridium botulinum A str. ATCC 19397 5395876 YP_001385589.1 CDS CLB_3326 NC_009697.1 3450110 3450379 R hypothetical protein complement(3450110..3450379) Clostridium botulinum A str. ATCC 19397 5397052 YP_001385590.1 CDS ligA NC_009697.1 3450480 3452474 R this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA complement(3450480..3452474) Clostridium botulinum A str. ATCC 19397 5398157 YP_001385591.1 CDS pcrA NC_009697.1 3452486 3454702 R identified by match to protein family HMM PF00580; match to protein family HMM TIGR01073; ATP-dependent DNA helicase PcrA complement(3452486..3454702) Clostridium botulinum A str. ATCC 19397 5396145 YP_001385592.1 CDS CLB_3329 NC_009697.1 3454829 3455128 R identified by match to protein family HMM PF01371; match to protein family HMM TIGR02531; TrpR family protein complement(3454829..3455128) Clostridium botulinum A str. ATCC 19397 5397594 YP_001385593.1 CDS CLB_3330 NC_009697.1 3455426 3456142 R identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; RNA pseudouridine synthase family protein complement(3455426..3456142) Clostridium botulinum A str. ATCC 19397 5397438 YP_001385594.1 CDS CLB_3331 NC_009697.1 3456226 3456942 R identified by match to protein family HMM PF01464; Slt family transglycosylase complement(3456226..3456942) Clostridium botulinum A str. ATCC 19397 5395931 YP_001385595.1 CDS CLB_3332 NC_009697.1 3456956 3458959 R identified by match to protein family HMM PF07495; triple tyrosine motif-containing protein complement(3456956..3458959) Clostridium botulinum A str. ATCC 19397 5395836 YP_001385596.1 CDS CLB_3333 NC_009697.1 3459093 3459260 D identified by Glimmer3; hypothetical protein 3459093..3459260 Clostridium botulinum A str. ATCC 19397 5397363 YP_001385597.1 CDS CLB_3334 NC_009697.1 3459424 3459858 R identified by match to protein family HMM PF02639; hypothetical protein complement(3459424..3459858) Clostridium botulinum A str. ATCC 19397 5394862 YP_001385598.1 CDS pgi NC_009697.1 3459869 3461221 R functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase complement(3459869..3461221) Clostridium botulinum A str. ATCC 19397 5397977 YP_001385599.1 CDS CLB_3336 NC_009697.1 3461305 3461475 R hypothetical protein complement(3461305..3461475) Clostridium botulinum A str. ATCC 19397 5396759 YP_001385600.1 CDS CLB_3337 NC_009697.1 3461784 3462428 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(3461784..3462428) Clostridium botulinum A str. ATCC 19397 5396986 YP_001385601.1 CDS ldhA-1 NC_009697.1 3463736 3464740 D identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-lactate dehydrogenase 3463736..3464740 Clostridium botulinum A str. ATCC 19397 5395727 YP_001385602.1 CDS ldhA-2 NC_009697.1 3464927 3465937 R identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-lactate dehydrogenase complement(3464927..3465937) Clostridium botulinum A str. ATCC 19397 5395325 YP_001385603.1 CDS CLB_3341 NC_009697.1 3466735 3467913 R hypothetical protein complement(3466735..3467913) Clostridium botulinum A str. ATCC 19397 5395609 YP_001385604.1 CDS CLB_3342 NC_009697.1 3468131 3469327 R identified by match to protein family HMM PF00037; match to protein family HMM PF00766; match to protein family HMM PF01012; electron transfer flavoprotein subunit alpha/FixB family protein complement(3468131..3469327) Clostridium botulinum A str. ATCC 19397 5394960 YP_001385605.1 CDS CLB_3343 NC_009697.1 3469345 3470139 R identified by match to protein family HMM PF01012; electron transfer flavoprotein subunit beta/FixA family protein complement(3469345..3470139) Clostridium botulinum A str. ATCC 19397 5396152 YP_001385606.1 CDS CLB_3344 NC_009697.1 3470152 3471285 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(3470152..3471285) Clostridium botulinum A str. ATCC 19397 5397002 YP_001385607.1 CDS fldC NC_009697.1 3471452 3472576 R identified by match to protein family HMM PF06050; R-phenyllactate dehydratase subunit C complement(3471452..3472576) Clostridium botulinum A str. ATCC 19397 5394533 YP_001385608.1 CDS fldB NC_009697.1 3472578 3473801 R identified by match to protein family HMM PF06050; R-phenyllactate dehydratase subunit B complement(3472578..3473801) Clostridium botulinum A str. ATCC 19397 5397901 YP_001385609.1 CDS fldI NC_009697.1 3473806 3474600 R identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; R-phenyllactate dehydratase activator complement(3473806..3474600) Clostridium botulinum A str. ATCC 19397 5396623 YP_001385610.1 CDS fldA NC_009697.1 3474600 3475838 R identified by match to protein family HMM PF02515; E-cinnamoyl-CoA:R-phenyllactate CoA transferase complement(3474600..3475838) Clostridium botulinum A str. ATCC 19397 5397990 YP_001385611.1 CDS CLB_3349 NC_009697.1 3475892 3477523 R identified by match to protein family HMM PF00501; AMP-binding protein complement(3475892..3477523) Clostridium botulinum A str. ATCC 19397 5395812 YP_001385612.1 CDS CLB_3350 NC_009697.1 3477989 3479311 R identified by match to protein family HMM PF05525; match to protein family HMM TIGR00796; branched-chain amino acid transport system II carrier protein complement(3477989..3479311) Clostridium botulinum A str. ATCC 19397 5397527 YP_001385613.1 CDS guaA NC_009697.1 3479770 3481302 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(3479770..3481302) Clostridium botulinum A str. ATCC 19397 5395242 YP_001385614.1 CDS guaB NC_009697.1 3481315 3482769 R catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase complement(3481315..3482769) Clostridium botulinum A str. ATCC 19397 5397517 YP_001385615.1 CDS CLB_3353 NC_009697.1 3483209 3483958 D identified by match to protein family HMM PF01171; PP-loop family protein 3483209..3483958 Clostridium botulinum A str. ATCC 19397 5397862 YP_001385616.1 CDS groEL NC_009697.1 3484037 3485662 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL complement(3484037..3485662) Clostridium botulinum A str. ATCC 19397 5395293 YP_001385617.1 CDS groES NC_009697.1 3485692 3485979 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(3485692..3485979) Clostridium botulinum A str. ATCC 19397 5397941 YP_001385618.1 CDS CLB_3357 NC_009697.1 3486295 3486939 D identified by match to protein family HMM PF07314; match to protein family HMM TIGR01906; hypothetical protein 3486295..3486939 Clostridium botulinum A str. ATCC 19397 5394753 YP_001385619.1 CDS CLB_3356 NC_009697.1 3486934 3487668 R identified by match to protein family HMM PF09335; hypothetical protein complement(3486934..3487668) Clostridium botulinum A str. ATCC 19397 5395814 YP_001385620.1 CDS CLB_3358 NC_009697.1 3488121 3489614 R identified by match to protein family HMM PF00037; match to protein family HMM PF02906; [Fe] hydrogenase complement(3488121..3489614) Clostridium botulinum A str. ATCC 19397 5395031 YP_001385621.1 CDS CLB_3359 NC_009697.1 3489787 3490704 R identified by match to protein family HMM PF00730; match to protein family HMM PF07934; 8-oxoguanine DNA glycosylase complement(3489787..3490704) Clostridium botulinum A str. ATCC 19397 5395898 YP_001385622.1 CDS gltA-2 NC_009697.1 3490854 3492239 R function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase complement(3490854..3492239) Clostridium botulinum A str. ATCC 19397 5397189 YP_001385623.1 CDS CLB_3361 NC_009697.1 3492239 3493129 R identified by match to protein family HMM PF00175; ferredoxin-NADP(+) reductase subunit alpha complement(3492239..3493129) Clostridium botulinum A str. ATCC 19397 5396824 YP_001385624.1 CDS CLB_3362 NC_009697.1 3493360 3493992 R modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex complement(3493360..3493992) Clostridium botulinum A str. ATCC 19397 5396364 YP_001385625.1 CDS CLB_3363 NC_009697.1 3494192 3496114 D identified by match to protein family HMM PF00005; drug resistance ABC transporter ATP-binding protein 3494192..3496114 Clostridium botulinum A str. ATCC 19397 5394954 YP_001385626.1 CDS CLB_3364 NC_009697.1 3496455 3497219 R identified by match to protein family HMM PF00072; match to protein family HMM PF04397; LytTr family DNA-binding response regulator complement(3496455..3497219) Clostridium botulinum A str. ATCC 19397 5395256 YP_001385627.1 CDS CLB_3365 NC_009697.1 3497220 3498854 R identified by match to protein family HMM PF02518; match to protein family HMM PF06580; match to protein family HMM PF07694; sensor histidine kinase complement(3497220..3498854) Clostridium botulinum A str. ATCC 19397 5395881 YP_001385628.1 CDS cstA NC_009697.1 3499097 3500515 D identified by match to protein family HMM PF02554; carbon starvation protein CstA 3499097..3500515 Clostridium botulinum A str. ATCC 19397 5394955 YP_001385629.1 CDS CLB_3367 NC_009697.1 3500566 3503493 R identified by match to protein family HMM PF05193; match to protein family HMM PF08367; peptidase complement(3500566..3503493) Clostridium botulinum A str. ATCC 19397 5395198 YP_001385630.1 CDS pyc NC_009697.1 3503874 3507308 R biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase complement(3503874..3507308) Clostridium botulinum A str. ATCC 19397 5397845 YP_001385631.1 CDS CLB_3369 NC_009697.1 3507768 3508790 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease complement(3507768..3508790) Clostridium botulinum A str. ATCC 19397 5394752 YP_001385632.1 CDS CLB_3370 NC_009697.1 3509014 3509637 D identified by match to protein family HMM PF05866; endodeoxyribonuclease RusA family protein 3509014..3509637 Clostridium botulinum A str. ATCC 19397 5395221 YP_001385633.1 CDS CLB_3371 NC_009697.1 3509873 3510004 D identified by Glimmer3; hypothetical protein 3509873..3510004 Clostridium botulinum A str. ATCC 19397 5395288 YP_001385634.1 CDS CLB_3372 NC_009697.1 3510014 3511270 R identified by match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase complement(3510014..3511270) Clostridium botulinum A str. ATCC 19397 5395209 YP_001385635.1 CDS CLB_3374 NC_009697.1 3511638 3512024 R hypothetical protein complement(3511638..3512024) Clostridium botulinum A str. ATCC 19397 5396942 YP_001385636.1 CDS CLB_3375 NC_009697.1 3512087 3512977 R hypothetical protein complement(3512087..3512977) Clostridium botulinum A str. ATCC 19397 5396268 YP_001385637.1 CDS CLB_3376 NC_009697.1 3512993 3513901 R identified by match to protein family HMM PF01297; manganese/zinc/iron chelate ABC transporter substrate-binding protein complement(3512993..3513901) Clostridium botulinum A str. ATCC 19397 5397365 YP_001385638.1 CDS CLB_3377 NC_009697.1 3514099 3515340 D identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; HDIG domain-containing protein 3514099..3515340 Clostridium botulinum A str. ATCC 19397 5394876 YP_001385639.1 CDS CLB_3378 NC_009697.1 3515478 3515936 D identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150; hypothetical protein 3515478..3515936 Clostridium botulinum A str. ATCC 19397 5397548 YP_001385640.1 CDS CLB_3379 NC_009697.1 3515933 3516646 D identified by match to protein family HMM PF00814; glycoprotease family protein 3515933..3516646 Clostridium botulinum A str. ATCC 19397 5397237 YP_001385641.1 CDS rimI NC_009697.1 3516639 3517097 D identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575; ribosomal-protein-alanine acetyltransferase 3516639..3517097 Clostridium botulinum A str. ATCC 19397 5396050 YP_001385642.1 CDS tyrS-2 NC_009697.1 3517455 3518678 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(3517455..3518678) Clostridium botulinum A str. ATCC 19397 5396495 YP_001385643.1 CDS CLB_3382 NC_009697.1 3518911 3519318 R hypothetical protein complement(3518911..3519318) Clostridium botulinum A str. ATCC 19397 5396794 YP_001385644.1 CDS CLB_3383 NC_009697.1 3519454 3520611 R identified by match to protein family HMM PF04326; ATP-binding protein complement(3519454..3520611) Clostridium botulinum A str. ATCC 19397 5396784 YP_001385645.1 CDS CLB_3384 NC_009697.1 3520759 3521322 R hypothetical protein complement(3520759..3521322) Clostridium botulinum A str. ATCC 19397 5398004 YP_001385646.1 CDS CLB_3385 NC_009697.1 3521405 3521566 R identified by Glimmer3; hypothetical protein complement(3521405..3521566) Clostridium botulinum A str. ATCC 19397 5396179 YP_001385647.1 CDS CLB_3386 NC_009697.1 3521829 3522821 D identified by match to protein family HMM PF01569; PAP2 family protein 3521829..3522821 Clostridium botulinum A str. ATCC 19397 5395650 YP_001385648.1 CDS prfC NC_009697.1 3522910 3524499 R identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR00503; peptide chain release factor 3 complement(3522910..3524499) Clostridium botulinum A str. ATCC 19397 5397701 YP_001385649.1 CDS CLB_3388 NC_009697.1 3525004 3525810 D identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD family hydrolase 3525004..3525810 Clostridium botulinum A str. ATCC 19397 5397014 YP_001385650.1 CDS trpS NC_009697.1 3525929 3526927 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(3525929..3526927) Clostridium botulinum A str. ATCC 19397 5397490 YP_001385651.1 CDS CLB_3390 NC_009697.1 3527106 3527243 R identified by Glimmer3; hypothetical protein complement(3527106..3527243) Clostridium botulinum A str. ATCC 19397 5394723 YP_001385652.1 CDS CLB_3391 NC_009697.1 3527540 3527914 R identified by match to protein family HMM PF01880; match to protein family HMM PF06397; match to protein family HMM TIGR00319; match to protein family HMM TIGR00320; match to protein family HMM TIGR00332; desulfoferrodoxin complement(3527540..3527914) Clostridium botulinum A str. ATCC 19397 5398149 YP_001385653.1 CDS CLB_3392 NC_009697.1 3528097 3528291 D hypothetical protein 3528097..3528291 Clostridium botulinum A str. ATCC 19397 5394802 YP_001385654.1 CDS cgs NC_009697.1 3528504 3537152 R identified by match to protein family HMM PF06165; match to protein family HMM PF06204; match to protein family HMM PF06205; cyclic beta 1-2 glucan synthetase complement(3528504..3537152) Clostridium botulinum A str. ATCC 19397 5396438 YP_001385655.1 CDS lysA NC_009697.1 3537417 3538703 R identified by match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01048; diaminopimelate decarboxylase complement(3537417..3538703) Clostridium botulinum A str. ATCC 19397 5396485 YP_001385656.1 CDS lysC NC_009697.1 3538719 3539921 R identified by match to protein family HMM PF00696; match to protein family HMM PF01842; match to protein family HMM TIGR00657; aspartokinase complement(3538719..3539921) Clostridium botulinum A str. ATCC 19397 5397698 YP_001385657.1 CDS CLB_3396 NC_009697.1 3540317 3541615 R catalyzes the removal of amino acids from the N termini of peptides; aminopeptidase 2 complement(3540317..3541615) Clostridium botulinum A str. ATCC 19397 5398021 YP_001385658.1 CDS CLB_3397 NC_009697.1 3541764 3542942 D identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein 3541764..3542942 Clostridium botulinum A str. ATCC 19397 5396148 YP_001385659.1 CDS CLB_3398 NC_009697.1 3543079 3544170 D hypothetical protein 3543079..3544170 Clostridium botulinum A str. ATCC 19397 5397918 YP_001385660.1 CDS CLB_3399 NC_009697.1 3544435 3546564 R helicase complement(3544435..3546564) Clostridium botulinum A str. ATCC 19397 5396421 YP_001385661.1 CDS ftsH-1 NC_009697.1 3546585 3548561 R identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM PF07728; match to protein family HMM TIGR01241; ATP-dependent metalloprotease FtsH complement(3546585..3548561) Clostridium botulinum A str. ATCC 19397 5397420 YP_001385662.1 CDS CLB_3401 NC_009697.1 3548988 3550379 R divalent metal ion-dependent extracellular dipeptidase; able to hydrolyze a broad range of dipeptides but no tri-, tetra-, or larger oligopeptides; differences in the amino acid specificity of the cleavage site varies between species; similar to succinyl-diaminopimelate desuccinylases; dipeptidase PepV complement(3548988..3550379) Clostridium botulinum A str. ATCC 19397 5394552 YP_001385663.1 CDS proS NC_009697.1 3550580 3552016 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(3550580..3552016) Clostridium botulinum A str. ATCC 19397 5394593 YP_001385664.1 CDS CLB_3403 NC_009697.1 3552443 3552685 R identified by match to protein family HMM PF01541; GIY-YIG domain-containing protein complement(3552443..3552685) Clostridium botulinum A str. ATCC 19397 5395266 YP_001385665.1 CDS CLB_3404 NC_009697.1 3552703 3552840 R identified by Glimmer3; hypothetical protein complement(3552703..3552840) Clostridium botulinum A str. ATCC 19397 5397000 YP_001385666.1 CDS CLB_3405 NC_009697.1 3553270 3554928 R identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740; match to protein family HMM TIGR00815; SulP family sulfate permease complement(3553270..3554928) Clostridium botulinum A str. ATCC 19397 5396592 YP_001385667.1 CDS CLB_3406 NC_009697.1 3555142 3556488 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase complement(3555142..3556488) Clostridium botulinum A str. ATCC 19397 5396503 YP_001385668.1 CDS CLB_3407 NC_009697.1 3556511 3557203 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(3556511..3557203) Clostridium botulinum A str. ATCC 19397 5397437 YP_001385669.1 CDS CLB_3408 NC_009697.1 3557468 3558676 R hypothetical protein complement(3557468..3558676) Clostridium botulinum A str. ATCC 19397 5397032 YP_001385670.1 CDS CLB_3409 NC_009697.1 3558681 3559586 R identified by match to protein family HMM PF00005; bacitracin ABC transporter ATP-binding protein complement(3558681..3559586) Clostridium botulinum A str. ATCC 19397 5395590 YP_001385671.1 CDS CLB_3410 NC_009697.1 3559943 3560146 D hypothetical protein 3559943..3560146 Clostridium botulinum A str. ATCC 19397 5397831 YP_001385672.1 CDS CLB_3411 NC_009697.1 3560273 3561268 R hypothetical protein complement(3560273..3561268) Clostridium botulinum A str. ATCC 19397 5396809 YP_001385673.1 CDS CLB_3412 NC_009697.1 3561635 3562720 R identified by match to protein family HMM PF05913; hypothetical protein complement(3561635..3562720) Clostridium botulinum A str. ATCC 19397 5398179 YP_001385674.1 CDS CLB_3413 NC_009697.1 3563027 3563920 R identified by match to protein family HMM PF01869; BadF/BadG/BcrA/BcrD ATPase family protein complement(3563027..3563920) Clostridium botulinum A str. ATCC 19397 5396141 YP_001385675.1 CDS CLB_3414 NC_009697.1 3563980 3564276 R identified by match to protein family HMM PF02255; PTS system lactose/cellobiose-specific family IIA subunit complement(3563980..3564276) Clostridium botulinum A str. ATCC 19397 5394855 YP_001385676.1 CDS CLB_3415 NC_009697.1 3564518 3564826 R identified by match to protein family HMM PF02302; PTS system lactose/cellobiose-specific family IIB subunit complement(3564518..3564826) Clostridium botulinum A str. ATCC 19397 5394681 YP_001385677.1 CDS CLB_3416 NC_009697.1 3564946 3567675 R identified by match to protein family HMM PF00158; match to protein family HMM PF00874; match to protein family HMM PF03610; match to protein family HMM PF07728; sigma-54 dependent transcriptional regulator complement(3564946..3567675) Clostridium botulinum A str. ATCC 19397 5396030 YP_001385678.1 CDS CLB_3417 NC_009697.1 3567800 3569092 R identified by match to protein family HMM PF02378; match to protein family HMM TIGR00410; PTS system lactose/cellobiose family transporter subunit IIC complement(3567800..3569092) Clostridium botulinum A str. ATCC 19397 5398196 YP_001385679.1 CDS CLB_3418 NC_009697.1 3569174 3570511 R identified by match to protein family HMM PF02056; glycosyl hydrolase family protein complement(3569174..3570511) Clostridium botulinum A str. ATCC 19397 5395570 YP_001385680.1 CDS CLB_3419 NC_009697.1 3570867 3572180 R identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase complement(3570867..3572180) Clostridium botulinum A str. ATCC 19397 5396313 YP_001385681.1 CDS CLB_3420 NC_009697.1 3572420 3573019 D identified by match to protein family HMM PF00589; phage integrase family site specific recombinase 3572420..3573019 Clostridium botulinum A str. ATCC 19397 5395815 YP_001385682.1 CDS speD NC_009697.1 3573330 3573680 R identified by match to protein family HMM PF02675; match to protein family HMM TIGR03330; S-adenosylmethionine decarboxylase complement(3573330..3573680) Clostridium botulinum A str. ATCC 19397 5397607 YP_001385683.1 CDS CLB_3422 NC_009697.1 3573834 3575030 R hypothetical protein complement(3573834..3575030) Clostridium botulinum A str. ATCC 19397 5395847 YP_001385684.1 CDS CLB_3423 NC_009697.1 3575552 3575827 R hypothetical protein complement(3575552..3575827) Clostridium botulinum A str. ATCC 19397 5397499 YP_001385685.1 CDS CLB_3424 NC_009697.1 3576323 3577177 R identified by match to protein family HMM PF05368; hypothetical protein complement(3576323..3577177) Clostridium botulinum A str. ATCC 19397 5395232 YP_001385686.1 CDS rumA-2 NC_009697.1 3578167 3579552 R identified by match to protein family HMM PF01938; match to protein family HMM PF02475; match to protein family HMM PF03602; match to protein family HMM PF05958; match to protein family HMM TIGR00479; 23S rRNA (uracil-5-)-methyltransferase RumA complement(3578167..3579552) Clostridium botulinum A str. ATCC 19397 5397369 YP_001385687.1 CDS CLB_3426 NC_009697.1 3579785 3580138 R hypothetical protein complement(3579785..3580138) Clostridium botulinum A str. ATCC 19397 5397564 YP_001385688.1 CDS CLB_3427 NC_009697.1 3580465 3581475 R identified by match to protein family HMM PF00037; match to protein family HMM PF00248; aldo/keto reductase complement(3580465..3581475) Clostridium botulinum A str. ATCC 19397 5396975 YP_001385689.1 CDS pykA NC_009697.1 3581619 3583376 R identified by match to protein family HMM PF00224; match to protein family HMM PF00391; match to protein family HMM PF02887; match to protein family HMM TIGR01064; pyruvate kinase complement(3581619..3583376) Clostridium botulinum A str. ATCC 19397 5396102 YP_001385690.1 CDS pfkA NC_009697.1 3583410 3584369 R catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase complement(3583410..3584369) Clostridium botulinum A str. ATCC 19397 5395214 YP_001385691.1 CDS dnaE NC_009697.1 3584611 3588168 R catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria.; DNA polymerase III DnaE complement(3584611..3588168) Clostridium botulinum A str. ATCC 19397 5395879 YP_001385692.1 CDS CLB_3431 NC_009697.1 3588331 3589278 R identified by match to protein family HMM PF02650; match to protein family HMM TIGR00647; hypothetical protein complement(3588331..3589278) Clostridium botulinum A str. ATCC 19397 5395160 YP_001385693.1 CDS CLB_3432 NC_009697.1 3589285 3590622 R identified by match to protein family HMM PF01933; match to protein family HMM TIGR01826; hypothetical protein complement(3589285..3590622) Clostridium botulinum A str. ATCC 19397 5397963 YP_001385694.1 CDS CLB_3433 NC_009697.1 3590619 3591503 R identified by match to protein family HMM PF03668; hypothetical protein complement(3590619..3591503) Clostridium botulinum A str. ATCC 19397 5396612 YP_001385695.1 CDS murB NC_009697.1 3591623 3592543 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(3591623..3592543) Clostridium botulinum A str. ATCC 19397 5394557 YP_001385696.1 CDS CLB_3435 NC_009697.1 3592612 3593343 R identified by match to protein family HMM PF02811; hydrolase complement(3592612..3593343) Clostridium botulinum A str. ATCC 19397 5397444 YP_001385697.1 CDS uvrC NC_009697.1 3593392 3595248 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(3593392..3595248) Clostridium botulinum A str. ATCC 19397 5396982 YP_001385698.1 CDS CLB_3437 NC_009697.1 3595262 3595870 R identified by match to protein family HMM PF04307; metal-dependent hydrolase, membrane-bound complement(3595262..3595870) Clostridium botulinum A str. ATCC 19397 5396346 YP_001385699.1 CDS CLB_3438 NC_009697.1 3596057 3596953 R identified by match to protein family HMM PF01336; match to protein family HMM PF01966; HD domain-containing protein complement(3596057..3596953) Clostridium botulinum A str. ATCC 19397 5397034 YP_001385700.1 CDS CLB_3439 NC_009697.1 3596981 3598411 R identified by match to protein family HMM PF00905; penicillin-binding protein complement(3596981..3598411) Clostridium botulinum A str. ATCC 19397 5395300 YP_001385701.1 CDS CLB_3440 NC_009697.1 3598416 3599645 R identified by match to protein family HMM PF01098; cell cycle protein FtsW complement(3598416..3599645) Clostridium botulinum A str. ATCC 19397 5395936 YP_001385702.1 CDS CLB_3441 NC_009697.1 3599656 3600093 R identified by match to protein family HMM PF00498; FHA domain-containing protein complement(3599656..3600093) Clostridium botulinum A str. ATCC 19397 5397410 YP_001385703.1 CDS uvrA NC_009697.1 3600192 3603014 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(3600192..3603014) Clostridium botulinum A str. ATCC 19397 5398045 YP_001385704.1 CDS uvrB NC_009697.1 3603033 3605021 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(3603033..3605021) Clostridium botulinum A str. ATCC 19397 5398144 YP_001385705.1 CDS CLB_3444 NC_009697.1 3605023 3606318 R hypothetical protein complement(3605023..3606318) Clostridium botulinum A str. ATCC 19397 5395969 YP_001385706.1 CDS CLB_3445 NC_009697.1 3606407 3607612 R identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; carboxyl-terminal protease complement(3606407..3607612) Clostridium botulinum A str. ATCC 19397 5395129 YP_001385707.1 CDS CLB_3446 NC_009697.1 3607822 3608712 R identified by match to protein family HMM PF02687; cell division protein FtsX complement(3607822..3608712) Clostridium botulinum A str. ATCC 19397 5396919 YP_001385708.1 CDS CLB_3447 NC_009697.1 3608702 3609388 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR02673; cell division ATP-binding protein FtsE complement(3608702..3609388) Clostridium botulinum A str. ATCC 19397 5395765 YP_001385709.1 CDS CLB_3448 NC_009697.1 3609544 3610446 R identified by match to protein family HMM PF02588; hypothetical protein complement(3609544..3610446) Clostridium botulinum A str. ATCC 19397 5395393 YP_001385710.1 CDS CLB_3449 NC_009697.1 3610539 3610748 R identified by Glimmer3; hypothetical protein complement(3610539..3610748) Clostridium botulinum A str. ATCC 19397 5395916 YP_001385711.1 CDS CLB_3450 NC_009697.1 3610962 3611903 R identified by match to protein family HMM PF02779; match to protein family HMM PF02780; transketolase, C-terminal subunit complement(3610962..3611903) Clostridium botulinum A str. ATCC 19397 5397123 YP_001385712.1 CDS CLB_3451 NC_009697.1 3611903 3612727 R identified by match to protein family HMM PF00456; transketolase complement(3611903..3612727) Clostridium botulinum A str. ATCC 19397 5396783 YP_001385713.1 CDS CLB_3452 NC_009697.1 3612990 3613343 R identified by match to protein family HMM PF02452; PemK family protein complement(3612990..3613343) Clostridium botulinum A str. ATCC 19397 5398101 YP_001385714.1 CDS CLB_3453 NC_009697.1 3613300 3613623 R hypothetical protein complement(3613300..3613623) Clostridium botulinum A str. ATCC 19397 5396771 YP_001385715.1 CDS alr NC_009697.1 3613762 3614922 R converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase complement(3613762..3614922) Clostridium botulinum A str. ATCC 19397 5394907 YP_001385716.1 CDS CLB_3455 NC_009697.1 3614950 3615564 R hypothetical protein complement(3614950..3615564) Clostridium botulinum A str. ATCC 19397 5395859 YP_001385717.1 CDS CLB_3456 NC_009697.1 3615764 3617266 R identified by match to protein family HMM PF01256; match to protein family HMM PF03853; match to protein family HMM TIGR00196; match to protein family HMM TIGR00197; carbohydrate kinase family protein complement(3615764..3617266) Clostridium botulinum A str. ATCC 19397 5396448 YP_001385718.1 CDS acpS NC_009697.1 3617263 3617643 R identified by match to protein family HMM PF01648; match to protein family HMM TIGR00516; match to protein family HMM TIGR00556; holo-(acyl-carrier-protein) synthase complement(3617263..3617643) Clostridium botulinum A str. ATCC 19397 5394730 YP_001385719.1 CDS CLB_3458 NC_009697.1 3617758 3618120 R hypothetical protein complement(3617758..3618120) Clostridium botulinum A str. ATCC 19397 5395518 YP_001385720.1 CDS CLB_3459 NC_009697.1 3618514 3619839 R identified by match to protein family HMM PF03553; match to protein family HMM PF06808; Na+/H+ antiporter family protein complement(3618514..3619839) Clostridium botulinum A str. ATCC 19397 5397864 YP_001385721.1 CDS CLB_3460 NC_009697.1 3620144 3621001 R identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765; hypothetical protein complement(3620144..3621001) Clostridium botulinum A str. ATCC 19397 5396058 YP_001385722.1 CDS CLB_3461 NC_009697.1 3621161 3621820 R hypothetical protein complement(3621161..3621820) Clostridium botulinum A str. ATCC 19397 5397179 YP_001385723.1 CDS rpsD-1 NC_009697.1 3622073 3622666 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(3622073..3622666) Clostridium botulinum A str. ATCC 19397 5394890 YP_001385724.1 CDS CLB_3463 NC_009697.1 3623112 3624284 D identified by match to protein family HMM PF00375; sodium:dicarboxylate symporter family protein 3623112..3624284 Clostridium botulinum A str. ATCC 19397 5396514 YP_001385725.1 CDS CLB_3464 NC_009697.1 3624471 3625064 R identified by match to protein family HMM PF01569; PAP2 family protein complement(3624471..3625064) Clostridium botulinum A str. ATCC 19397 5398078 YP_001385726.1 CDS CLB_3466 NC_009697.1 3626133 3626615 D hypothetical protein 3626133..3626615 Clostridium botulinum A str. ATCC 19397 5397509 YP_001385727.1 CDS glmS NC_009697.1 3626821 3628647 R identified by match to protein family HMM PF00310; match to protein family HMM PF01380; match to protein family HMM TIGR01135; glucosamine--fructose-6-phosphate aminotransferase complement(3626821..3628647) Clostridium botulinum A str. ATCC 19397 5397322 YP_001385728.1 CDS CLB_3468 NC_009697.1 3629250 3629927 R identified by match to protein family HMM PF00923; transaldolase complement(3629250..3629927) Clostridium botulinum A str. ATCC 19397 5398135 YP_001385729.1 CDS CLB_3469 NC_009697.1 3629946 3630593 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; haloacid dehalogenase complement(3629946..3630593) Clostridium botulinum A str. ATCC 19397 5395719 YP_001385730.1 CDS srlD NC_009697.1 3630617 3631402 R catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate; sorbitol-6-phosphate dehydrogenase complement(3630617..3631402) Clostridium botulinum A str. ATCC 19397 5395568 YP_001385731.1 CDS CLB_3471 NC_009697.1 3631422 3631787 R identified by match to protein family HMM PF03829; PTS system glucitol/sorbitol-specific transporter subunit IIA complement(3631422..3631787) Clostridium botulinum A str. ATCC 19397 5397378 YP_001385732.1 CDS CLB_3472 NC_009697.1 3632003 3633007 R identified by match to protein family HMM PF03612; match to protein family HMM PF07663; match to protein family HMM TIGR00825; PTS system glucitol/sorbitol-specific transporter subunit IIBC complement(3632003..3633007) Clostridium botulinum A str. ATCC 19397 5395254 YP_001385733.1 CDS CLB_3473 NC_009697.1 3633020 3633565 R identified by match to protein family HMM PF03608; match to protein family HMM TIGR00821; PTS system glucitol/sorbitol-specific transporter subunit IIC complement(3633020..3633565) Clostridium botulinum A str. ATCC 19397 5397846 YP_001385734.1 CDS gutM NC_009697.1 3633608 3634003 R identified by match to protein family HMM PF06923; glucitol operon activator protein complement(3633608..3634003) Clostridium botulinum A str. ATCC 19397 5395964 YP_001385735.1 CDS CLB_3475 NC_009697.1 3634017 3635066 R identified by match to protein family HMM PF00107; match to protein family HMM PF08240; L-iditol 2-dehydrogenase complement(3634017..3635066) Clostridium botulinum A str. ATCC 19397 5397497 YP_001385736.1 CDS CLB_3476 NC_009697.1 3635101 3636072 R identified by match to protein family HMM PF04198; glucitol operon regulator complement(3635101..3636072) Clostridium botulinum A str. ATCC 19397 5396588 YP_001385737.1 CDS glmM NC_009697.1 3636427 3637776 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(3636427..3637776) Clostridium botulinum A str. ATCC 19397 5394742 YP_001385738.1 CDS CLB_3479 NC_009697.1 3639192 3640262 R catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA; 2-ketoisovalerate ferredoxin reductase complement(3639192..3640262) Clostridium botulinum A str. ATCC 19397 5397654 YP_001385739.1 CDS CLB_3480 NC_009697.1 3640278 3640487 R identified by match to protein family HMM PF00037; 2-oxoacid:acceptor oxidoreductase subunit delta complement(3640278..3640487) Clostridium botulinum A str. ATCC 19397 5394873 YP_001385740.1 CDS CLB_3481 NC_009697.1 3640589 3641251 R hypothetical protein complement(3640589..3641251) Clostridium botulinum A str. ATCC 19397 5396606 YP_001385741.1 CDS buk-1 NC_009697.1 3641514 3642584 R catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase complement(3641514..3642584) Clostridium botulinum A str. ATCC 19397 5394913 YP_001385742.1 CDS ptb NC_009697.1 3642613 3643524 R catalyzes the synthesis of butanoylphosphate from butanoyl-CoA and inorganic phosphate; phosphate butyryltransferase complement(3642613..3643524) Clostridium botulinum A str. ATCC 19397 5397238 YP_001385743.1 CDS buk-2 NC_009697.1 3643517 3644611 R catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase complement(3643517..3644611) Clostridium botulinum A str. ATCC 19397 5396741 YP_001385744.1 CDS CLB_3485 NC_009697.1 3644712 3646310 R oxidoreductase, FAD-binding complement(3644712..3646310) Clostridium botulinum A str. ATCC 19397 5394760 YP_001385745.1 CDS CLB_3486 NC_009697.1 3646312 3647592 R identified by match to protein family HMM PF07949; hypothetical protein complement(3646312..3647592) Clostridium botulinum A str. ATCC 19397 5395017 YP_001385746.1 CDS CLB_3487 NC_009697.1 3647562 3648410 R identified by match to protein family HMM PF02457; match to protein family HMM TIGR00159; hypothetical protein complement(3647562..3648410) Clostridium botulinum A str. ATCC 19397 5394607 YP_001385747.1 CDS CLB_3488 NC_009697.1 3648665 3649198 D identified by match to protein family HMM PF07486; cell wall hydrolase family protein 3648665..3649198 Clostridium botulinum A str. ATCC 19397 5394893 YP_001385748.1 CDS CLB_3489 NC_009697.1 3649590 3650453 R identified by match to protein family HMM PF01134; match to protein family HMM PF07992; pyridine nucleotide-disulfide family oxidoreductase complement(3649590..3650453) Clostridium botulinum A str. ATCC 19397 5396097 YP_001385749.1 CDS trx NC_009697.1 3650519 3650836 R identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin complement(3650519..3650836) Clostridium botulinum A str. ATCC 19397 5397733 YP_001385750.1 CDS iadA NC_009697.1 3650945 3652120 R identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR01975; isoaspartyl dipeptidase complement(3650945..3652120) Clostridium botulinum A str. ATCC 19397 5395627 YP_001385751.1 CDS CLB_3492 NC_009697.1 3652195 3653448 R identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein complement(3652195..3653448) Clostridium botulinum A str. ATCC 19397 5395230 YP_001385752.1 CDS CLB_3493 NC_009697.1 3653476 3654216 R lipoprotein complement(3653476..3654216) Clostridium botulinum A str. ATCC 19397 5397995 YP_001385753.1 CDS ptsI NC_009697.1 3654319 3655938 R identified by match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01417; phosphoenolpyruvate-protein phosphotransferase complement(3654319..3655938) Clostridium botulinum A str. ATCC 19397 5396234 YP_001385754.1 CDS CLB_3495 NC_009697.1 3656256 3658265 D identified by match to protein family HMM PF00158; match to protein family HMM PF00989; match to protein family HMM PF02954; match to protein family HMM TIGR00229; sensory box sigma-54 dependent transcriptional regulator 3656256..3658265 Clostridium botulinum A str. ATCC 19397 5396065 YP_001385755.1 CDS CLB_3496 NC_009697.1 3658402 3659109 R identified by match to protein family HMM PF00515; hypothetical protein complement(3658402..3659109) Clostridium botulinum A str. ATCC 19397 5396547 YP_001385756.1 CDS CLB_3497 NC_009697.1 3659179 3659733 R identified by match to protein family HMM PF05683; match to protein family HMM TIGR00723; tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta complement(3659179..3659733) Clostridium botulinum A str. ATCC 19397 5396999 YP_001385757.1 CDS CLB_3498 NC_009697.1 3659834 3660676 R Catalyzes the reversible hydration of fumaric acid to yield I-malic acid; fumarate hydratase complement(3659834..3660676) Clostridium botulinum A str. ATCC 19397 5394707 YP_001385758.1 CDS CLB_3499 NC_009697.1 3660817 3661521 R identified by match to protein family HMM PF01520; match to protein family HMM TIGR02883; N-acetylmuramoyl-L-alanine amidase complement(3660817..3661521) Clostridium botulinum A str. ATCC 19397 5396135 YP_001385759.1 CDS CLB_3500 NC_009697.1 3661787 3663403 R identified by match to protein family HMM PF01895; match to protein family HMM PF02690; match to protein family HMM TIGR00704; Na/Pi-cotransporter family protein/PhoU family protein complement(3661787..3663403) Clostridium botulinum A str. ATCC 19397 5397861 YP_001385760.1 CDS rpsI NC_009697.1 3663709 3664101 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(3663709..3664101) Clostridium botulinum A str. ATCC 19397 5396461 YP_001385761.1 CDS rplM NC_009697.1 3664127 3664561 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(3664127..3664561) Clostridium botulinum A str. ATCC 19397 5396673 YP_001385762.1 CDS truA NC_009697.1 3664685 3665425 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(3664685..3665425) Clostridium botulinum A str. ATCC 19397 5396793 YP_001385763.1 CDS CLB_3504 NC_009697.1 3665425 3666228 R identified by match to protein family HMM PF02361; cobalt ABC transporter permease complement(3665425..3666228) Clostridium botulinum A str. ATCC 19397 5397719 YP_001385764.1 CDS cbiO NC_009697.1 3666225 3667091 R with CbiNQ forms the ABC transporter for cobalt import; Clostridia have two adjacent copies of this gene; cobalt transporter ATP-binding subunit complement(3666225..3667091) Clostridium botulinum A str. ATCC 19397 5396526 YP_001385765.1 CDS CLB_3506 NC_009697.1 3667076 3667924 R with CbiNQ forms the ABC transporter for cobalt import; Mycoplasmas have two adjacent copies of this gene; cobalt transporter ATP-binding subunit complement(3667076..3667924) Clostridium botulinum A str. ATCC 19397 5395874 YP_001385766.1 CDS rplQ NC_009697.1 3668015 3668356 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(3668015..3668356) Clostridium botulinum A str. ATCC 19397 5396666 YP_001385767.1 CDS rpoA NC_009697.1 3668400 3669347 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(3668400..3669347) Clostridium botulinum A str. ATCC 19397 5397605 YP_001385768.1 CDS rpsD NC_009697.1 3669415 3670035 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(3669415..3670035) Clostridium botulinum A str. ATCC 19397 5397085 YP_001385769.1 CDS rpsK NC_009697.1 3670070 3670468 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(3670070..3670468) Clostridium botulinum A str. ATCC 19397 5398220 YP_001385770.1 CDS rpsM NC_009697.1 3670486 3670857 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(3670486..3670857) Clostridium botulinum A str. ATCC 19397 5397873 YP_001385771.1 CDS rpmJ NC_009697.1 3670970 3671083 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 complement(3670970..3671083) Clostridium botulinum A str. ATCC 19397 5397508 YP_001385772.1 CDS infA NC_009697.1 3671100 3671318 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(3671100..3671318) Clostridium botulinum A str. ATCC 19397 5395664 YP_001385773.1 CDS CLB_3514 NC_009697.1 3671326 3671607 R hypothetical protein complement(3671326..3671607) Clostridium botulinum A str. ATCC 19397 5397561 YP_001385774.1 CDS map-1 NC_009697.1 3671622 3672371 R identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500; methionine aminopeptidase complement(3671622..3672371) Clostridium botulinum A str. ATCC 19397 5396569 YP_001385775.1 CDS adk NC_009697.1 3672371 3673021 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(3672371..3673021) Clostridium botulinum A str. ATCC 19397 5395550 YP_001385776.1 CDS secY NC_009697.1 3673045 3674322 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(3673045..3674322) Clostridium botulinum A str. ATCC 19397 5395058 YP_001385777.1 CDS rplO NC_009697.1 3674323 3674763 R late assembly protein; 50S ribosomal protein L15 complement(3674323..3674763) Clostridium botulinum A str. ATCC 19397 5396548 YP_001385778.1 CDS rpmD NC_009697.1 3674783 3674962 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(3674783..3674962) Clostridium botulinum A str. ATCC 19397 5396340 YP_001385779.1 CDS rpsE NC_009697.1 3674976 3675473 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(3674976..3675473) Clostridium botulinum A str. ATCC 19397 5397781 YP_001385780.1 CDS rplR NC_009697.1 3675491 3675850 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(3675491..3675850) Clostridium botulinum A str. ATCC 19397 5396249 YP_001385781.1 CDS rplF NC_009697.1 3675869 3676411 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(3675869..3676411) Clostridium botulinum A str. ATCC 19397 5397943 YP_001385782.1 CDS rpsH NC_009697.1 3676435 3676833 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(3676435..3676833) Clostridium botulinum A str. ATCC 19397 5397476 YP_001385783.1 CDS rpsN NC_009697.1 3676863 3677048 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 complement(3676863..3677048) Clostridium botulinum A str. ATCC 19397 5395192 YP_001385784.1 CDS rplE NC_009697.1 3677065 3677607 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(3677065..3677607) Clostridium botulinum A str. ATCC 19397 5395495 YP_001385785.1 CDS rplX NC_009697.1 3677630 3677947 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(3677630..3677947) Clostridium botulinum A str. ATCC 19397 5396468 YP_001385786.1 CDS rplN NC_009697.1 3677971 3678339 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(3677971..3678339) Clostridium botulinum A str. ATCC 19397 5397929 YP_001385787.1 CDS rpsQ NC_009697.1 3678374 3678628 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(3678374..3678628) Clostridium botulinum A str. ATCC 19397 5396361 YP_001385788.1 CDS rpmC NC_009697.1 3678650 3678862 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(3678650..3678862) Clostridium botulinum A str. ATCC 19397 5395261 YP_001385789.1 CDS rplP NC_009697.1 3678852 3679295 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(3678852..3679295) Clostridium botulinum A str. ATCC 19397 5396802 YP_001385790.1 CDS rpsC NC_009697.1 3679313 3679984 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(3679313..3679984) Clostridium botulinum A str. ATCC 19397 5396968 YP_001385791.1 CDS rplV NC_009697.1 3680002 3680337 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(3680002..3680337) Clostridium botulinum A str. ATCC 19397 5396219 YP_001385792.1 CDS rpsS NC_009697.1 3680359 3680643 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(3680359..3680643) Clostridium botulinum A str. ATCC 19397 5397395 YP_001385793.1 CDS rplB NC_009697.1 3680713 3681546 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(3680713..3681546) Clostridium botulinum A str. ATCC 19397 5397453 YP_001385794.1 CDS rplW NC_009697.1 3681601 3681894 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(3681601..3681894) Clostridium botulinum A str. ATCC 19397 5395506 YP_001385795.1 CDS rplD NC_009697.1 3681894 3682514 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(3681894..3682514) Clostridium botulinum A str. ATCC 19397 5397484 YP_001385796.1 CDS rplC NC_009697.1 3682539 3683168 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(3682539..3683168) Clostridium botulinum A str. ATCC 19397 5396356 YP_001385797.1 CDS rpsJ NC_009697.1 3683258 3683566 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(3683258..3683566) Clostridium botulinum A str. ATCC 19397 5396042 YP_001385798.1 CDS tuf-1 NC_009697.1 3683963 3685156 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(3683963..3685156) Clostridium botulinum A str. ATCC 19397 5396973 YP_001385799.1 CDS fusA-1 NC_009697.1 3685196 3687265 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(3685196..3687265) Clostridium botulinum A str. ATCC 19397 5397183 YP_001385800.1 CDS rpsG NC_009697.1 3687331 3687801 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(3687331..3687801) Clostridium botulinum A str. ATCC 19397 5397401 YP_001385801.1 CDS rpsL NC_009697.1 3687962 3688339 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(3687962..3688339) Clostridium botulinum A str. ATCC 19397 5395255 YP_001385802.1 CDS CLB_3543 NC_009697.1 3688415 3688654 R identified by match to protein family HMM PF01248; ribosomal protein L7Ae family protein complement(3688415..3688654) Clostridium botulinum A str. ATCC 19397 5396561 YP_001385803.1 CDS rpoC NC_009697.1 3688779 3692315 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' complement(3688779..3692315) Clostridium botulinum A str. ATCC 19397 5396564 YP_001385804.1 CDS rpoB NC_009697.1 3692336 3696034 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(3692336..3696034) Clostridium botulinum A str. ATCC 19397 5395983 YP_001385805.1 CDS rplL NC_009697.1 3696299 3696670 R present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 complement(3696299..3696670) Clostridium botulinum A str. ATCC 19397 5395068 YP_001385806.1 CDS rplJ NC_009697.1 3696717 3697217 R binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 complement(3696717..3697217) Clostridium botulinum A str. ATCC 19397 5396416 YP_001385807.1 CDS rplA NC_009697.1 3697419 3698108 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(3697419..3698108) Clostridium botulinum A str. ATCC 19397 5395005 YP_001385808.1 CDS rplK NC_009697.1 3698165 3698590 R binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 complement(3698165..3698590) Clostridium botulinum A str. ATCC 19397 5395095 YP_001385809.1 CDS nusG NC_009697.1 3698661 3699185 R Modulates Rho-dependent transcription termination; transcription antitermination protein NusG complement(3698661..3699185) Clostridium botulinum A str. ATCC 19397 5397041 YP_001385810.1 CDS secE NC_009697.1 3699232 3699459 R forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE complement(3699232..3699459) Clostridium botulinum A str. ATCC 19397 5394613 YP_001385811.1 CDS rpmG NC_009697.1 3699509 3699658 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 complement(3699509..3699658) Clostridium botulinum A str. ATCC 19397 5396055 YP_001385812.1 CDS tuf-2 NC_009697.1 3699860 3701053 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(3699860..3701053) Clostridium botulinum A str. ATCC 19397 5397314 YP_001385813.1 CDS sigH NC_009697.1 3701369 3702010 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 complement(3701369..3702010) Clostridium botulinum A str. ATCC 19397 5396932 YP_001385814.1 CDS CLB_3557 NC_009697.1 3702084 3702593 R identified by match to protein family HMM PF05991; hypothetical protein complement(3702084..3702593) Clostridium botulinum A str. ATCC 19397 5396965 YP_001385815.1 CDS CLB_3558 NC_009697.1 3702596 3703369 R identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; RNA methyltransferase complement(3702596..3703369) Clostridium botulinum A str. ATCC 19397 5395274 YP_001385816.1 CDS thyX NC_009697.1 3703372 3704124 R flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase complement(3703372..3704124) Clostridium botulinum A str. ATCC 19397 5396626 YP_001385817.1 CDS CLB_3560 NC_009697.1 3704114 3704554 R identified by match to protein family HMM PF00636; RNase3 domain-containing protein complement(3704114..3704554) Clostridium botulinum A str. ATCC 19397 5396429 YP_001385818.1 CDS cysS NC_009697.1 3704603 3706000 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(3704603..3706000) Clostridium botulinum A str. ATCC 19397 5395808 YP_001385819.1 CDS ilvA NC_009697.1 3706029 3707246 R identified by match to protein family HMM PF00291; match to protein family HMM TIGR01127; threonine dehydratase complement(3706029..3707246) Clostridium botulinum A str. ATCC 19397 5395236 YP_001385820.1 CDS CLB_3563 NC_009697.1 3707318 3708955 R identified by match to protein family HMM PF03129; match to protein family HMM PF04073; prolyl-tRNA synthetase complement(3707318..3708955) Clostridium botulinum A str. ATCC 19397 5395684 YP_001385821.1 CDS ispD NC_009697.1 3709066 3709755 R 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(3709066..3709755) Clostridium botulinum A str. ATCC 19397 5396218 YP_001385822.1 CDS CLB_3565 NC_009697.1 3709757 3710857 R identified by match to protein family HMM PF01850; match to protein family HMM PF01938; PIN/TRAM domain-containing protein complement(3709757..3710857) Clostridium botulinum A str. ATCC 19397 5396586 YP_001385823.1 CDS CLB_3566 NC_009697.1 3711262 3711660 D hypothetical protein 3711262..3711660 Clostridium botulinum A str. ATCC 19397 5395920 YP_001385824.1 CDS CLB_3567 NC_009697.1 3711692 3712753 R non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair; DNA integrity scanning protein DisA complement(3711692..3712753) Clostridium botulinum A str. ATCC 19397 5395285 YP_001385825.1 CDS radA NC_009697.1 3712772 3714130 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(3712772..3714130) Clostridium botulinum A str. ATCC 19397 5395201 YP_001385826.1 CDS clpC NC_009697.1 3714250 3716685 R identified by match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; negative regulator of genetic competence MecB/ClpC complement(3714250..3716685) Clostridium botulinum A str. ATCC 19397 5396607 YP_001385827.1 CDS CLB_3570 NC_009697.1 3716687 3717730 R identified by match to protein family HMM PF00217; ATP:guanido phosphotransferase complement(3716687..3717730) Clostridium botulinum A str. ATCC 19397 5396056 YP_001385828.1 CDS CLB_3571 NC_009697.1 3717735 3718262 R identified by match to protein family HMM PF02151; UVR domain-containing protein complement(3717735..3718262) Clostridium botulinum A str. ATCC 19397 5395657 YP_001385829.1 CDS ctsR NC_009697.1 3718285 3718749 R identified by match to protein family HMM PF05848; transciptional repressor CtsR complement(3718285..3718749) Clostridium botulinum A str. ATCC 19397 5394663 YP_001385830.1 CDS CLB_3573 NC_009697.1 3719145 3719375 R hypothetical protein complement(3719145..3719375) Clostridium botulinum A str. ATCC 19397 5395468 YP_001385831.1 CDS fusA-2 NC_009697.1 3719722 3721794 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(3719722..3721794) Clostridium botulinum A str. ATCC 19397 5397685 YP_001385832.1 CDS murD NC_009697.1 3732809 3734185 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(3732809..3734185) Clostridium botulinum A str. ATCC 19397 5395511 YP_001385833.1 CDS glyS NC_009697.1 3735011 3736402 R Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase complement(3735011..3736402) Clostridium botulinum A str. ATCC 19397 5395515 YP_001385834.1 CDS lysS NC_009697.1 3736722 3738236 R class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase complement(3736722..3738236) Clostridium botulinum A str. ATCC 19397 5398018 YP_001385835.1 CDS greA NC_009697.1 3738255 3738737 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA complement(3738255..3738737) Clostridium botulinum A str. ATCC 19397 5396737 YP_001385836.1 CDS CLB_3595 NC_009697.1 3738868 3739695 R hypothetical protein complement(3738868..3739695) Clostridium botulinum A str. ATCC 19397 5396878 YP_001385837.1 CDS CLB_3596 NC_009697.1 3739745 3740716 R identified by match to protein family HMM PF01180; match to protein family HMM PF01207; match to protein family HMM TIGR00737; dihydrouridine synthase complement(3739745..3740716) Clostridium botulinum A str. ATCC 19397 5395770 YP_001385838.1 CDS CLB_3597 NC_009697.1 3740726 3741502 R type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase complement(3740726..3741502) Clostridium botulinum A str. ATCC 19397 5397101 YP_001385839.1 CDS fhs NC_009697.1 3741657 3743330 R catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase complement(3741657..3743330) Clostridium botulinum A str. ATCC 19397 5397945 YP_001385840.1 CDS ftsH-2 NC_009697.1 3743533 3745338 R identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM PF07728; match to protein family HMM TIGR01241; ATP-dependent metalloprotease FtsH complement(3743533..3745338) Clostridium botulinum A str. ATCC 19397 5397678 YP_001385841.1 CDS hpt-2 NC_009697.1 3745420 3745965 R identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203; hypoxanthine phosphoribosyltransferase complement(3745420..3745965) Clostridium botulinum A str. ATCC 19397 5396648 YP_001385842.1 CDS tilS NC_009697.1 3745949 3747355 R identified by match to protein family HMM PF01171; match to protein family HMM TIGR02432; match to protein family HMM TIGR02433; tRNA(Ile)-lysidine synthetase complement(3745949..3747355) Clostridium botulinum A str. ATCC 19397 5397313 YP_001385843.1 CDS spoIIE NC_009697.1 3747504 3749891 R identified by match to protein family HMM PF07228; match to protein family HMM TIGR02865; stage II sporulation protein E complement(3747504..3749891) Clostridium botulinum A str. ATCC 19397 5394798 YP_001385844.1 CDS CLB_3610 NC_009697.1 3751155 3751559 R identified by match to protein family HMM PF00575; hypothetical protein complement(3751155..3751559) Clostridium botulinum A str. ATCC 19397 5395840 YP_001385845.1 CDS CLB_3611 NC_009697.1 3751621 3751890 R identified by match to protein family HMM PF04977; cell division protein FtsL complement(3751621..3751890) Clostridium botulinum A str. ATCC 19397 5397159 YP_001385846.1 CDS CLB_3612 NC_009697.1 3751985 3752383 R identified by match to protein family HMM TIGR02893; hypothetical protein complement(3751985..3752383) Clostridium botulinum A str. ATCC 19397 5396291 YP_001385847.1 CDS yabP NC_009697.1 3752398 3752688 R identified by match to protein family HMM PF07873; match to protein family HMM TIGR02892; sporulation protein YabP complement(3752398..3752688) Clostridium botulinum A str. ATCC 19397 5396949 YP_001385848.1 CDS CLB_3614 NC_009697.1 3752808 3753047 R identified by match to protein family HMM PF01479; S4 domain-containing protein complement(3752808..3753047) Clostridium botulinum A str. ATCC 19397 5394537 YP_001385849.1 CDS hup NC_009697.1 3753121 3753399 R identified by match to protein family HMM PF00216; DNA-binding protein HU complement(3753121..3753399) Clostridium botulinum A str. ATCC 19397 5394973 YP_001385850.1 CDS CLB_3616 NC_009697.1 3753527 3754972 R identified by match to protein family HMM PF00590; match to protein family HMM PF03819; match to protein family HMM TIGR00444; MazG family protein complement(3753527..3754972) Clostridium botulinum A str. ATCC 19397 5395106 YP_001385851.1 CDS spoVB-2 NC_009697.1 3754987 3756522 R identified by match to protein family HMM PF01554; match to protein family HMM PF01943; match to protein family HMM PF03023; stage V sporulation protein B complement(3754987..3756522) Clostridium botulinum A str. ATCC 19397 5397330 YP_001385852.1 CDS CLB_3618 NC_009697.1 3756655 3757206 R identified by match to protein family HMM PF04014; match to protein family HMM TIGR01439; match to protein family HMM TIGR02851; stage V sporulation protein T complement(3756655..3757206) Clostridium botulinum A str. ATCC 19397 5396532 YP_001385853.1 CDS prsA NC_009697.1 3757405 3758415 R cis/trans isomerase of peptidylprolyl; PPIase; membrane-bound lipoprotein; peptidyl-prolyl isomerase complement(3757405..3758415) Clostridium botulinum A str. ATCC 19397 5396506 YP_001385854.1 CDS mfd NC_009697.1 3758499 3762005 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM PF04851; match to protein family HMM TIGR00580; transcription-repair coupling factor complement(3758499..3762005) Clostridium botulinum A str. ATCC 19397 5395215 YP_001385855.1 CDS pth NC_009697.1 3762033 3762602 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(3762033..3762602) Clostridium botulinum A str. ATCC 19397 5398121 YP_001385856.1 CDS CLB_3622 NC_009697.1 3762712 3763884 R identified by match to protein family HMM PF00089; match to protein family HMM PF00595; protease complement(3762712..3763884) Clostridium botulinum A str. ATCC 19397 5397020 YP_001385857.1 CDS CLB_3623 NC_009697.1 3763919 3765328 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase complement(3763919..3765328) Clostridium botulinum A str. ATCC 19397 5397064 YP_001385858.1 CDS CLB_3624 NC_009697.1 3765329 3766015 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(3765329..3766015) Clostridium botulinum A str. ATCC 19397 5395328 YP_001385859.1 CDS prs NC_009697.1 3766195 3767154 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(3766195..3767154) Clostridium botulinum A str. ATCC 19397 5395805 YP_001385860.1 CDS glmU NC_009697.1 3767175 3768548 R forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(3767175..3768548) Clostridium botulinum A str. ATCC 19397 5397709 YP_001385861.1 CDS spoVG NC_009697.1 3768710 3768997 R stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus; regulatory protein SpoVG complement(3768710..3768997) Clostridium botulinum A str. ATCC 19397 5397666 YP_001385862.1 CDS purR NC_009697.1 3769100 3769915 R identified by match to protein family HMM PF00156; match to protein family HMM PF09182; match to protein family HMM TIGR01743; pur operon repressor complement(3769100..3769915) Clostridium botulinum A str. ATCC 19397 5398184 YP_001385863.1 CDS murC NC_009697.1 3770115 3771491 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 3770115..3771491 Clostridium botulinum A str. ATCC 19397 5397565 YP_001385864.1 CDS CLB_3630 NC_009697.1 3771556 3771864 D hypothetical protein 3771556..3771864 Clostridium botulinum A str. ATCC 19397 5395891 YP_001385865.1 CDS CLB_3632 NC_009697.1 3772110 3773459 D identified by match to protein family HMM PF00037; match to protein family HMM PF02906; [Fe] hydrogenase 3772110..3773459 Clostridium botulinum A str. ATCC 19397 5395971 YP_001385866.1 CDS CLB_3633 NC_009697.1 3773545 3774189 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; haloacid dehalogenase 3773545..3774189 Clostridium botulinum A str. ATCC 19397 5396672 YP_001385867.1 CDS CLB_3634 NC_009697.1 3774464 3774862 D hypothetical protein 3774464..3774862 Clostridium botulinum A str. ATCC 19397 5395978 YP_001385868.1 CDS CLB_3635 NC_009697.1 3774929 3775648 R catalyzes the formation of (2R)-3-sulfolactate from (2R)-2-phospho-3-sulfolactate; 2-phosphosulfolactate phosphatase complement(3774929..3775648) Clostridium botulinum A str. ATCC 19397 5396292 YP_001385869.1 CDS CLB_3636 NC_009697.1 3775693 3776625 R identified by match to protein family HMM PF04055; match to protein family HMM TIGR01212; radical SAM family protein complement(3775693..3776625) Clostridium botulinum A str. ATCC 19397 5396358 YP_001385870.1 CDS CLB_3637 NC_009697.1 3776693 3777829 R phage head-tail adaptor complement(3776693..3777829) Clostridium botulinum A str. ATCC 19397 5394900 YP_001385871.1 CDS CLB_3638 NC_009697.1 3777969 3779015 D hypothetical protein 3777969..3779015 Clostridium botulinum A str. ATCC 19397 5396845 YP_001385872.1 CDS CLB_3639 NC_009697.1 3779048 3779944 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 3779048..3779944 Clostridium botulinum A str. ATCC 19397 5397533 YP_001385873.1 CDS CLB_3640 NC_009697.1 3780087 3781883 R identified by match to protein family HMM PF00015; match to protein family HMM PF07700; methyl-accepting chemotaxis protein complement(3780087..3781883) Clostridium botulinum A str. ATCC 19397 5395535 YP_001385874.1 CDS CLB_3641 NC_009697.1 3782186 3782848 R identified by match to protein family HMM PF01381; DNA-binding protein complement(3782186..3782848) Clostridium botulinum A str. ATCC 19397 5395157 YP_001385875.1 CDS CLB_3642 NC_009697.1 3782863 3783237 R hypothetical protein complement(3782863..3783237) Clostridium botulinum A str. ATCC 19397 5395173 YP_001385876.1 CDS CLB_3643 NC_009697.1 3783255 3783773 R identified by match to protein family HMM PF00160; cyclophilin type peptidyl-prolyl cis-trans isomerase complement(3783255..3783773) Clostridium botulinum A str. ATCC 19397 5397626 YP_001385877.1 CDS murI NC_009697.1 3783920 3784693 R converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase complement(3783920..3784693) Clostridium botulinum A str. ATCC 19397 5395263 YP_001385878.1 CDS CLB_3645 NC_009697.1 3784886 3786784 D identified by match to protein family HMM PF00120; glutamine synthetase 3784886..3786784 Clostridium botulinum A str. ATCC 19397 5396229 YP_001385879.1 CDS CLB_3646 NC_009697.1 3786829 3787377 R hypothetical protein complement(3786829..3787377) Clostridium botulinum A str. ATCC 19397 5396679 YP_001385880.1 CDS murA NC_009697.1 3787773 3789026 D adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3787773..3789026 Clostridium botulinum A str. ATCC 19397 5397867 YP_001385881.1 CDS CLB_3648 NC_009697.1 3789052 3789837 D identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 3789052..3789837 Clostridium botulinum A str. ATCC 19397 5394909 YP_001385882.1 CDS CLB_3649 NC_009697.1 3789854 3790423 D lipoprotein 3789854..3790423 Clostridium botulinum A str. ATCC 19397 5397120 YP_001385883.1 CDS CLB_3650 NC_009697.1 3790438 3790941 D identified by match to protein family HMM PF02810; hypothetical protein 3790438..3790941 Clostridium botulinum A str. ATCC 19397 5395773 YP_001385884.1 CDS CLB_3651 NC_009697.1 3791120 3791599 D SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 3791120..3791599 Clostridium botulinum A str. ATCC 19397 5398177 YP_001385885.1 CDS CLB_3653 NC_009697.1 3792418 3793644 R identified by match to protein family HMM PF07690; major facilitator family protein complement(3792418..3793644) Clostridium botulinum A str. ATCC 19397 5395107 YP_001385886.1 CDS CLB_3654 NC_009697.1 3793680 3794315 R identified by match to protein family HMM PF03358; NADPH-dependent FMN reductase complement(3793680..3794315) Clostridium botulinum A str. ATCC 19397 5397611 YP_001385887.1 CDS CLB_3655 NC_009697.1 3794608 3795180 D identified by match to protein family HMM PF00440; match to protein family HMM PF02796; TetR family transcriptional regulator 3794608..3795180 Clostridium botulinum A str. ATCC 19397 5395907 YP_001385888.1 CDS CLB_3656 NC_009697.1 3795427 3795813 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 3795427..3795813 Clostridium botulinum A str. ATCC 19397 5395392 YP_001385889.1 CDS map-2 NC_009697.1 3795845 3796720 D identified by match to protein family HMM PF00557; match to protein family HMM PF02810; match to protein family HMM TIGR00500; methionine aminopeptidase 3795845..3796720 Clostridium botulinum A str. ATCC 19397 5397039 YP_001385890.1 CDS CLB_3658 NC_009697.1 3796810 3797349 R identified by match to protein family HMM PF00881; nitroreductase family protein complement(3796810..3797349) Clostridium botulinum A str. ATCC 19397 5397590 YP_001385891.1 CDS CLB_3659 NC_009697.1 3798051 3799547 D hypothetical protein 3798051..3799547 Clostridium botulinum A str. ATCC 19397 5397303 YP_001385892.1 CDS CLB_3660 NC_009697.1 3799540 3800376 D identified by match to protein family HMM PF00037; match to protein family HMM PF04055; radical SAM domain-containing protein 3799540..3800376 Clostridium botulinum A str. ATCC 19397 5397265 YP_001385893.1 CDS CLB_3661 NC_009697.1 3800792 3801043 D hypothetical protein 3800792..3801043 Clostridium botulinum A str. ATCC 19397 5397916 YP_001385894.1 CDS CLB_3662 NC_009697.1 3801046 3802092 D catalyzes the formation of biotin from dethiobiotin and sulfur; biotin synthase 3801046..3802092 Clostridium botulinum A str. ATCC 19397 5395998 YP_001385895.1 CDS thiH NC_009697.1 3802093 3803469 D in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and IscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; in Thermotoga this enzyme has an extra C-terminal domain; thiamine biosynthesis protein ThiH 3802093..3803469 Clostridium botulinum A str. ATCC 19397 5395281 YP_001385896.1 CDS CLB_3664 NC_009697.1 3803478 3804677 D identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; GTP-binding protein 3803478..3804677 Clostridium botulinum A str. ATCC 19397 5396873 YP_001385897.1 CDS CLB_3665 NC_009697.1 3804992 3806365 D identified by match to protein family HMM PF00474; sodium:solute symporter family protein 3804992..3806365 Clostridium botulinum A str. ATCC 19397 5396327 YP_001385898.1 CDS CLB_3666 NC_009697.1 3806665 3807909 D identified by match to protein family HMM PF00534; glycoside hydrolase family protein 3806665..3807909 Clostridium botulinum A str. ATCC 19397 5395766 YP_001385899.1 CDS CLB_3667 NC_009697.1 3808071 3808748 R identified by match to protein family HMM PF02811; phosphotransferase domain-containing protein complement(3808071..3808748) Clostridium botulinum A str. ATCC 19397 5397911 YP_001385900.1 CDS CLB_3668 NC_009697.1 3809044 3809529 D identified by match to protein family HMM PF08761; hypothetical protein 3809044..3809529 Clostridium botulinum A str. ATCC 19397 5397470 YP_001385901.1 CDS CLB_3669 NC_009697.1 3809636 3810067 D identified by match to protein family HMM PF04657; hypothetical protein 3809636..3810067 Clostridium botulinum A str. ATCC 19397 5395744 YP_001385902.1 CDS CLB_3670 NC_009697.1 3810248 3811153 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 3810248..3811153 Clostridium botulinum A str. ATCC 19397 5396214 YP_001385903.1 CDS CLB_3671 NC_009697.1 3811241 3812437 D identified by match to protein family HMM PF00082; subtilase family protein 3811241..3812437 Clostridium botulinum A str. ATCC 19397 5394773 YP_001385904.1 CDS CLB_3672 NC_009697.1 3812472 3813353 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator complement(3812472..3813353) Clostridium botulinum A str. ATCC 19397 5396812 YP_001385905.1 CDS CLB_3673 NC_009697.1 3813382 3814329 R identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-isomer specific 2-hydroxyacid dehydrogenase complement(3813382..3814329) Clostridium botulinum A str. ATCC 19397 5397312 YP_001385906.1 CDS accA NC_009697.1 3814529 3815368 R identified by match to protein family HMM PF03255; match to protein family HMM TIGR00513; acetyl-CoA carboxylase, carboxyl transferase subunit alpha complement(3814529..3815368) Clostridium botulinum A str. ATCC 19397 5396294 YP_001385907.1 CDS accD NC_009697.1 3815415 3816284 R identified by match to protein family HMM TIGR00515; acetyl-CoA carboxylase, carboxyl transferase subunit beta complement(3815415..3816284) Clostridium botulinum A str. ATCC 19397 5396955 YP_001385908.1 CDS accC NC_009697.1 3816304 3817650 R identified by match to protein family HMM PF00289; match to protein family HMM PF01071; match to protein family HMM PF02222; match to protein family HMM PF02785; match to protein family HMM PF02786; match to protein family HMM PF08443; match to protein family HMM TIGR00514; biotin carboxylase complement(3816304..3817650) Clostridium botulinum A str. ATCC 19397 5397274 YP_001385909.1 CDS fabZ NC_009697.1 3817682 3818116 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(3817682..3818116) Clostridium botulinum A str. ATCC 19397 5397218 YP_001385910.1 CDS accB NC_009697.1 3818136 3818612 R identified by match to protein family HMM PF00364; match to protein family HMM TIGR00531; acetyl-CoA carboxylase, biotin carboxyl carrier protein complement(3818136..3818612) Clostridium botulinum A str. ATCC 19397 5398141 YP_001385911.1 CDS fabF NC_009697.1 3818616 3819854 R FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase complement(3818616..3819854) Clostridium botulinum A str. ATCC 19397 5396830 YP_001385912.1 CDS fabG NC_009697.1 3819874 3820620 R catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(3819874..3820620) Clostridium botulinum A str. ATCC 19397 5394689 YP_001385913.1 CDS fabD NC_009697.1 3820638 3821582 R identified by match to protein family HMM PF00013; match to protein family HMM PF00698; match to protein family HMM TIGR00128; malonyl CoA-acyl carrier protein transacylase complement(3820638..3821582) Clostridium botulinum A str. ATCC 19397 5395149 YP_001385914.1 CDS CLB_3682 NC_009697.1 3821603 3822529 R identified by match to protein family HMM PF03060; match to protein family HMM TIGR03151; 2-nitropropane dioxygenase complement(3821603..3822529) Clostridium botulinum A str. ATCC 19397 5398095 YP_001385915.1 CDS acpP-2 NC_009697.1 3822655 3822879 R identified by match to protein family HMM PF00550; acyl carrier protein complement(3822655..3822879) Clostridium botulinum A str. ATCC 19397 5396376 YP_001385916.1 CDS fabH NC_009697.1 3822920 3823900 R identified by match to protein family HMM PF08541; match to protein family HMM PF08545; match to protein family HMM TIGR00747; 3-oxoacyl-ACP synthase complement(3822920..3823900) Clostridium botulinum A str. ATCC 19397 5395624 YP_001385917.1 CDS CLB_3685 NC_009697.1 3823893 3824369 R identified by match to protein family HMM PF01047; match to protein family HMM PF03965; MarR family transcriptional regulator complement(3823893..3824369) Clostridium botulinum A str. ATCC 19397 5395900 YP_001385918.1 CDS CLB_3686 NC_009697.1 3824385 3825443 R identified by match to protein family HMM PF03060; 2-nitropropane dioxygenase complement(3824385..3825443) Clostridium botulinum A str. ATCC 19397 5395787 YP_001385919.1 CDS CLB_3687 NC_009697.1 3825540 3826475 R identified by match to protein family HMM PF01551; peptidase complement(3825540..3826475) Clostridium botulinum A str. ATCC 19397 5395314 YP_001385920.1 CDS CLB_3688 NC_009697.1 3826656 3827642 D identified by match to protein family HMM PF04271; match to protein family HMM TIGR01446; DNA replication protein DnaD 3826656..3827642 Clostridium botulinum A str. ATCC 19397 5396368 YP_001385921.1 CDS CLB_3689 NC_009697.1 3827635 3828612 D acts to load the DnaB helicase onto the initiation site during DNA replication; DNA replication protein DnaC 3827635..3828612 Clostridium botulinum A str. ATCC 19397 5394891 YP_001385925.1 CDS CLB_3704 NC_009697.1 3829858 3830667 R identified by match to protein family HMM PF03618; hypothetical protein complement(3829858..3830667) Clostridium botulinum A str. ATCC 19397 5396009 YP_001385926.1 CDS CLB_3705 NC_009697.1 3830680 3831054 R identified by match to protein family HMM PF02629; CoA-binding protein complement(3830680..3831054) Clostridium botulinum A str. ATCC 19397 5397074 YP_001385927.1 CDS CLB_3706 NC_009697.1 3831235 3832464 D identified by match to protein family HMM PF03486; match to protein family HMM TIGR00275; pyridine nucleotide-disulfide oxidoreductase family protein 3831235..3832464 Clostridium botulinum A str. ATCC 19397 5395302 YP_001385928.1 CDS CLB_3707 NC_009697.1 3832566 3833315 R identified by match to protein family HMM PF01643; acyl-ACP thioesterase complement(3832566..3833315) Clostridium botulinum A str. ATCC 19397 5397033 YP_001385929.1 CDS CLB_3708 NC_009697.1 3833418 3833603 R hypothetical protein complement(3833418..3833603) Clostridium botulinum A str. ATCC 19397 5395071 YP_001385930.1 CDS purA NC_009697.1 3833729 3835015 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(3833729..3835015) Clostridium botulinum A str. ATCC 19397 5397042 YP_001385931.1 CDS CLB_3710 NC_009697.1 3835247 3836632 R identified by match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase family protein complement(3835247..3836632) Clostridium botulinum A str. ATCC 19397 5395580 YP_001385932.1 CDS CLB_3711 NC_009697.1 3836798 3837013 R identified by Glimmer3; hypothetical protein complement(3836798..3837013) Clostridium botulinum A str. ATCC 19397 5398075 YP_001385933.1 CDS CLB_3712 NC_009697.1 3837206 3838927 R identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphoglucomutase/phosphomannomutase family protein complement(3837206..3838927) Clostridium botulinum A str. ATCC 19397 5396491 YP_001385934.1 CDS dnaB NC_009697.1 3839169 3840506 R unwinds double stranded DNA; replicative DNA helicase complement(3839169..3840506) Clostridium botulinum A str. ATCC 19397 5395973 YP_001385935.1 CDS CLB_3714 NC_009697.1 3840537 3842456 R identified by match to protein family HMM PF00004; match to protein family HMM PF01078; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR02903; ATP-dependent protease complement(3840537..3842456) Clostridium botulinum A str. ATCC 19397 5397597 YP_001385936.1 CDS rplI NC_009697.1 3842467 3842910 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(3842467..3842910) Clostridium botulinum A str. ATCC 19397 5395394 YP_001385937.1 CDS CLB_3716 NC_009697.1 3842910 3844895 R identified by match to protein family HMM PF01368; match to protein family HMM PF02272; DHH family protein complement(3842910..3844895) Clostridium botulinum A str. ATCC 19397 5395152 YP_001385938.1 CDS CLB_3717 NC_009697.1 3844896 3845900 R hypothetical protein complement(3844896..3845900) Clostridium botulinum A str. ATCC 19397 5395792 YP_001385939.1 CDS CLB_3718 NC_009697.1 3845912 3846229 R hypothetical protein complement(3845912..3846229) Clostridium botulinum A str. ATCC 19397 5397093 YP_001385940.1 CDS rpsR NC_009697.1 3846377 3846619 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(3846377..3846619) Clostridium botulinum A str. ATCC 19397 5397834 YP_001385941.1 CDS ssb NC_009697.1 3846638 3847084 R identified by match to protein family HMM PF00436; match to protein family HMM PF01336; match to protein family HMM TIGR00621; single-strand binding protein complement(3846638..3847084) Clostridium botulinum A str. ATCC 19397 5398180 YP_001385942.1 CDS rpsF NC_009697.1 3847100 3847384 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(3847100..3847384) Clostridium botulinum A str. ATCC 19397 5394694 YP_001385943.1 CDS CLB_3722 NC_009697.1 3847490 3848638 R identified by match to protein family HMM PF06050; R-2-hydroxyglutaryl-CoA dehydratase subunit complement(3847490..3848638) Clostridium botulinum A str. ATCC 19397 5394544 YP_001385944.1 CDS CLB_3723 NC_009697.1 3848912 3849109 R identified by match to protein family HMM PF06107; hypothetical protein complement(3848912..3849109) Clostridium botulinum A str. ATCC 19397 5397339 YP_001385945.1 CDS CLB_3724 NC_009697.1 3849125 3849994 R identified by match to protein family HMM PF00924; mechanosensitive ion channel family protein complement(3849125..3849994) Clostridium botulinum A str. ATCC 19397 5397975 YP_001385946.1 CDS CLB_3725 NC_009697.1 3850001 3850246 R hypothetical protein complement(3850001..3850246) Clostridium botulinum A str. ATCC 19397 5395091 YP_001385947.1 CDS CLB_3726 NC_009697.1 3850437 3851591 D identified by match to protein family HMM PF00266; match to protein family HMM TIGR01977; cysteine desulfurase 3850437..3851591 Clostridium botulinum A str. ATCC 19397 5396235 YP_001385948.1 CDS ytvI NC_009697.1 3851605 3852660 D identified by match to protein family HMM PF01594; match to protein family HMM TIGR02872; sporulation integral membrane protein YtvI 3851605..3852660 Clostridium botulinum A str. ATCC 19397 5398056 YP_001385949.1 CDS CLB_3728 NC_009697.1 3852718 3853299 D identified by match to protein family HMM PF06866; match to protein family HMM TIGR02841; hypothetical protein 3852718..3853299 Clostridium botulinum A str. ATCC 19397 5395884 YP_001385950.1 CDS CLB_3729 NC_009697.1 3853301 3853546 R identified by Glimmer3; hypothetical protein complement(3853301..3853546) Clostridium botulinum A str. ATCC 19397 5395341 YP_001385951.1 CDS CLB_3730 NC_009697.1 3853599 3854108 R hypothetical protein complement(3853599..3854108) Clostridium botulinum A str. ATCC 19397 5397273 YP_001385952.1 CDS CLB_3731 NC_009697.1 3854146 3854994 R identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; stage 0 sporulation protein J complement(3854146..3854994) Clostridium botulinum A str. ATCC 19397 5396978 YP_001385953.1 CDS soj NC_009697.1 3855010 3855774 R identified by match to protein family HMM PF01656; sporulation initiation inhibitor protein soj complement(3855010..3855774) Clostridium botulinum A str. ATCC 19397 5396814 YP_001385954.1 CDS CLB_3733 NC_009697.1 3855901 3856680 R identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; parB family protein complement(3855901..3856680) Clostridium botulinum A str. ATCC 19397 5395560 YP_001385955.1 CDS gidB NC_009697.1 3856780 3857499 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(3856780..3857499) Clostridium botulinum A str. ATCC 19397 5397284 YP_001385956.1 CDS gidA-2 NC_009697.1 3857523 3859400 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(3857523..3859400) Clostridium botulinum A str. ATCC 19397 5397610 YP_001385957.1 CDS trmE NC_009697.1 3859409 3860794 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(3859409..3860794) Clostridium botulinum A str. ATCC 19397 5395054 YP_001385958.1 CDS jag NC_009697.1 3860842 3861468 R identified by match to protein family HMM PF01424; jag protein complement(3860842..3861468) Clostridium botulinum A str. ATCC 19397 5395571 YP_001385959.1 CDS oxaA NC_009697.1 3861486 3862139 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC complement(3861486..3862139) Clostridium botulinum A str. ATCC 19397 5395472 YP_001385960.1 CDS CLB_3739 NC_009697.1 3862165 3862374 R identified by match to protein family HMM PF01809; match to protein family HMM TIGR00278; hypothetical protein complement(3862165..3862374) Clostridium botulinum A str. ATCC 19397 5397488 YP_001385961.1 CDS rnpA NC_009697.1 3862371 3862706 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(3862371..3862706) Clostridium botulinum A str. ATCC 19397 5395608 YP_001385962.1 CDS rpmH NC_009697.1 3862761 3862895 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(3862761..3862895) Clostridium botulinum A str. ATCC 19397 5397925 CLB_0013 tRNA CLB_0013 NC_009697.1 14122 14198 D tRNA-Met 14122..14198 Clostridium botulinum A str. ATCC 19397 5394598 CLB_0014 tRNA CLB_0014 NC_009697.1 14202 14277 D tRNA-Ala 14202..14277 Clostridium botulinum A str. ATCC 19397 5395499 CLB_0023 tRNA CLB_0023 NC_009697.1 23913 24003 D tRNA-Ser 23913..24003 Clostridium botulinum A str. ATCC 19397 5397208 CLB_0024 tRNA CLB_0024 NC_009697.1 24024 24114 D tRNA-Ser 24024..24114 Clostridium botulinum A str. ATCC 19397 5395291 CLB_0025 tRNA CLB_0025 NC_009697.1 24421 24511 D tRNA-Ser 24421..24511 Clostridium botulinum A str. ATCC 19397 5395273 CLB_0026 tRNA CLB_0026 NC_009697.1 24532 24622 D tRNA-Ser 24532..24622 Clostridium botulinum A str. ATCC 19397 5397167 CLB_0027 tRNA CLB_0027 NC_009697.1 24707 24783 D tRNA-Arg 24707..24783 Clostridium botulinum A str. ATCC 19397 5396933 CLB_0037 tRNA CLB_0037 NC_009697.1 33794 33870 D tRNA-Arg 33794..33870 Clostridium botulinum A str. ATCC 19397 5397201 CLB_0041 tRNA CLB_0041 NC_009697.1 37631 37720 D tRNA-Ser 37631..37720 Clostridium botulinum A str. ATCC 19397 5396578 CLB_0060 tRNA CLB_0060 NC_009697.1 53337 53412 D tRNA-Lys 53337..53412 Clostridium botulinum A str. ATCC 19397 5395512 CLB_0067 tRNA CLB_0067 NC_009697.1 59975 60050 D tRNA-Lys 59975..60050 Clostridium botulinum A str. ATCC 19397 5397176 CLB_0075 tRNA CLB_0075 NC_009697.1 67841 67916 D tRNA-Phe 67841..67916 Clostridium botulinum A str. ATCC 19397 5394827 CLB_0083 tRNA CLB_0083 NC_009697.1 75364 75437 D tRNA-Cys 75364..75437 Clostridium botulinum A str. ATCC 19397 5394708 CLB_0203 tRNA CLB_0203 NC_009697.1 192825 192900 D tRNA-Thr 192825..192900 Clostridium botulinum A str. ATCC 19397 5396072 CLB_0204 tRNA CLB_0204 NC_009697.1 192906 192990 D tRNA-Tyr 192906..192990 Clostridium botulinum A str. ATCC 19397 5396453 CLB_0205 tRNA CLB_0205 NC_009697.1 193004 193079 D tRNA-Val 193004..193079 Clostridium botulinum A str. ATCC 19397 5396023 CLB_0206 tRNA CLB_0206 NC_009697.1 193097 193172 D tRNA-Thr 193097..193172 Clostridium botulinum A str. ATCC 19397 5396454 CLB_0207 tRNA CLB_0207 NC_009697.1 193178 193262 D tRNA-Tyr 193178..193262 Clostridium botulinum A str. ATCC 19397 5395463 CLB_0228 tRNA CLB_0228 NC_009697.1 219967 220041 R tRNA-Gln complement(219967..220041) Clostridium botulinum A str. ATCC 19397 5394865 CLB_0441 tRNA CLB_0441 NC_009697.1 455620 455695 D tRNA-Ala 455620..455695 Clostridium botulinum A str. ATCC 19397 5394826 CLB_0442 tRNA CLB_0442 NC_009697.1 455701 455777 D tRNA-Ile 455701..455777 Clostridium botulinum A str. ATCC 19397 5396663 CLB_0447 tRNA CLB_0447 NC_009697.1 459010 459084 D tRNA-Asn 459010..459084 Clostridium botulinum A str. ATCC 19397 5394599 CLB_0519 tRNA CLB_0519 NC_009697.1 541949 542023 D tRNA-Glu 541949..542023 Clostridium botulinum A str. ATCC 19397 5396669 CLB_2999 tRNA CLB_2999 NC_009697.1 3140356 3140446 R tRNA-Sec complement(3140356..3140446) Clostridium botulinum A str. ATCC 19397 5396044 CLB_3036 tRNA CLB_3036 NC_009697.1 3174974 3175058 R tRNA-Leu complement(3174974..3175058) Clostridium botulinum A str. ATCC 19397 5397246 CLB_3074 tRNA CLB_3074 NC_009697.1 3207004 3207090 R tRNA-Leu complement(3207004..3207090) Clostridium botulinum A str. ATCC 19397 5397742 CLB_3173 tRNA CLB_3173 NC_009697.1 3320960 3321033 R tRNA-Cys complement(3320960..3321033) Clostridium botulinum A str. ATCC 19397 5396432 CLB_3174 tRNA CLB_3174 NC_009697.1 3321043 3321117 R tRNA-Gly complement(3321043..3321117) Clostridium botulinum A str. ATCC 19397 5396150 CLB_3175 tRNA CLB_3175 NC_009697.1 3321122 3321197 R tRNA-Phe complement(3321122..3321197) Clostridium botulinum A str. ATCC 19397 5395559 CLB_3176 tRNA CLB_3176 NC_009697.1 3321201 3321277 R tRNA-Asp complement(3321201..3321277) Clostridium botulinum A str. ATCC 19397 5397326 CLB_3177 tRNA CLB_3177 NC_009697.1 3321283 3321358 R tRNA-Val complement(3321283..3321358) Clostridium botulinum A str. ATCC 19397 5395726 CLB_3295 tRNA CLB_3295 NC_009697.1 3438516 3438592 R tRNA-Arg complement(3438516..3438592) Clostridium botulinum A str. ATCC 19397 5395759 CLB_3296 tRNA CLB_3296 NC_009697.1 3438618 3438691 R tRNA-Gly complement(3438618..3438691) Clostridium botulinum A str. ATCC 19397 5396008 CLB_3297 tRNA CLB_3297 NC_009697.1 3438721 3438796 R tRNA-Pro complement(3438721..3438796) Clostridium botulinum A str. ATCC 19397 5395725 CLB_3298 tRNA CLB_3298 NC_009697.1 3438823 3438898 R tRNA-Lys complement(3438823..3438898) Clostridium botulinum A str. ATCC 19397 5397152 CLB_3299 tRNA CLB_3299 NC_009697.1 3438904 3438980 R tRNA-Arg complement(3438904..3438980) Clostridium botulinum A str. ATCC 19397 5396100 CLB_3300 tRNA CLB_3300 NC_009697.1 3438987 3439060 R tRNA-Gly complement(3438987..3439060) Clostridium botulinum A str. ATCC 19397 5394780 CLB_3301 tRNA CLB_3301 NC_009697.1 3439069 3439143 R tRNA-Gly complement(3439069..3439143) Clostridium botulinum A str. ATCC 19397 5395299 CLB_3302 tRNA CLB_3302 NC_009697.1 3439210 3439293 R tRNA-Leu complement(3439210..3439293) Clostridium botulinum A str. ATCC 19397 5395795 CLB_3303 tRNA CLB_3303 NC_009697.1 3439309 3439384 R tRNA-Lys complement(3439309..3439384) Clostridium botulinum A str. ATCC 19397 5395699 CLB_3304 tRNA CLB_3304 NC_009697.1 3439388 3439462 R tRNA-Gln complement(3439388..3439462) Clostridium botulinum A str. ATCC 19397 5396022 CLB_3305 tRNA CLB_3305 NC_009697.1 3439467 3439542 R tRNA-His complement(3439467..3439542) Clostridium botulinum A str. ATCC 19397 5397959 CLB_3306 tRNA CLB_3306 NC_009697.1 3439558 3439633 R tRNA-Lys complement(3439558..3439633) Clostridium botulinum A str. ATCC 19397 5396099 CLB_3307 tRNA CLB_3307 NC_009697.1 3439639 3439715 R tRNA-Arg complement(3439639..3439715) Clostridium botulinum A str. ATCC 19397 5398052 CLB_3308 tRNA CLB_3308 NC_009697.1 3439722 3439795 R tRNA-Gly complement(3439722..3439795) Clostridium botulinum A str. ATCC 19397 5396664 CLB_3309 tRNA CLB_3309 NC_009697.1 3439804 3439878 R tRNA-Gly complement(3439804..3439878) Clostridium botulinum A str. ATCC 19397 5395685 CLB_3310 tRNA CLB_3310 NC_009697.1 3439945 3440028 R tRNA-Leu complement(3439945..3440028) Clostridium botulinum A str. ATCC 19397 5395649 CLB_3311 tRNA CLB_3311 NC_009697.1 3440044 3440119 R tRNA-Lys complement(3440044..3440119) Clostridium botulinum A str. ATCC 19397 5395615 CLB_3312 tRNA CLB_3312 NC_009697.1 3440123 3440197 R tRNA-Gln complement(3440123..3440197) Clostridium botulinum A str. ATCC 19397 5398053 CLB_3313 tRNA CLB_3313 NC_009697.1 3440202 3440277 R tRNA-His complement(3440202..3440277) Clostridium botulinum A str. ATCC 19397 5395841 CLB_3314 tRNA CLB_3314 NC_009697.1 3440285 3440361 R tRNA-Arg complement(3440285..3440361) Clostridium botulinum A str. ATCC 19397 5397100 CLB_3315 tRNA CLB_3315 NC_009697.1 3440368 3440441 R tRNA-Gly complement(3440368..3440441) Clostridium botulinum A str. ATCC 19397 5397960 CLB_3316 tRNA CLB_3316 NC_009697.1 3440449 3440524 R tRNA-Pro complement(3440449..3440524) Clostridium botulinum A str. ATCC 19397 5395686 CLB_3373 tRNA CLB_3373 NC_009697.1 3511511 3511586 R tRNA-Trp complement(3511511..3511586) Clostridium botulinum A str. ATCC 19397 5396799 CLB_3554 tRNA CLB_3554 NC_009697.1 3701136 3701211 R tRNA-Thr complement(3701136..3701211) Clostridium botulinum A str. ATCC 19397 5397192 CLB_3555 tRNA CLB_3555 NC_009697.1 3701230 3701304 R tRNA-Gly complement(3701230..3701304) Clostridium botulinum A str. ATCC 19397 5395154 CLB_3575 tRNA CLB_3575 NC_009697.1 3721982 3722056 R tRNA-Asn complement(3721982..3722056) Clostridium botulinum A str. ATCC 19397 5396552 CLB_3576 tRNA CLB_3576 NC_009697.1 3722084 3722158 R tRNA-Asn complement(3722084..3722158) Clostridium botulinum A str. ATCC 19397 5394781 CLB_3581 tRNA CLB_3581 NC_009697.1 3725350 3725426 R tRNA-Ile complement(3725350..3725426) Clostridium botulinum A str. ATCC 19397 5394991 CLB_3583 tRNA CLB_3583 NC_009697.1 3727240 3727315 R tRNA-Ala complement(3727240..3727315) Clostridium botulinum A str. ATCC 19397 5394990 CLB_t01 tRNA CLB_t01 NC_009697.1 3727321 3727397 R tRNA-Met complement(3727321..3727397) Clostridium botulinum A str. ATCC 19397 5548024 CLB_3603 tRNA CLB_3603 NC_009697.1 3750219 3750295 R tRNA-Met complement(3750219..3750295) Clostridium botulinum A str. ATCC 19397 5395195 CLB_3604 tRNA CLB_3604 NC_009697.1 3750306 3750381 R tRNA-Met complement(3750306..3750381) Clostridium botulinum A str. ATCC 19397 5397099 CLB_t02 tRNA CLB_t02 NC_009697.1 3750435 3750510 R tRNA-Met complement(3750435..3750510) Clostridium botulinum A str. ATCC 19397 5548023 CLB_3605 tRNA CLB_3605 NC_009697.1 3750564 3750639 R tRNA-Met complement(3750564..3750639) Clostridium botulinum A str. ATCC 19397 5395290 CLB_3606 tRNA CLB_3606 NC_009697.1 3750644 3750732 R tRNA-Leu complement(3750644..3750732) Clostridium botulinum A str. ATCC 19397 5396110 CLB_3607 tRNA CLB_3607 NC_009697.1 3750764 3750840 R tRNA-Met complement(3750764..3750840) Clostridium botulinum A str. ATCC 19397 5396894 CLB_3608 tRNA CLB_3608 NC_009697.1 3750845 3750920 R tRNA-Met complement(3750845..3750920) Clostridium botulinum A str. ATCC 19397 5397327 CLB_3609 tRNA CLB_3609 NC_009697.1 3750925 3751013 R tRNA-Leu complement(3750925..3751013) Clostridium botulinum A str. ATCC 19397 5396895 CLB_3631 tRNA CLB_3631 NC_009697.1 3771942 3772017 D tRNA-Pro 3771942..3772017 Clostridium botulinum A str. ATCC 19397 5396691 CLB_3786 tRNA CLB_3786 NC_009697.1 3828702 3828777 R tRNA-Thr complement(3828702..3828777) Clostridium botulinum A str. ATCC 19397 8538009 CLB_3787 tRNA CLB_3787 NC_009697.1 3828782 3828858 R tRNA-Asp complement(3828782..3828858) Clostridium botulinum A str. ATCC 19397 8538012 CLB_3788 tRNA CLB_3788 NC_009697.1 3828868 3828943 R tRNA-Val complement(3828868..3828943) Clostridium botulinum A str. ATCC 19397 8538006 CLB_3789 tRNA CLB_3789 NC_009697.1 3828961 3829035 R tRNA-Glu complement(3828961..3829035) Clostridium botulinum A str. ATCC 19397 8538011 CLB_3790 tRNA CLB_3790 NC_009697.1 3829093 3829169 R tRNA-Asp complement(3829093..3829169) Clostridium botulinum A str. ATCC 19397 8538007 CLB_3697 tRNA CLB_3697 NC_009697.1 3829178 3829253 R tRNA-Val complement(3829178..3829253) Clostridium botulinum A str. ATCC 19397 5395833 CLB_3791 tRNA CLB_3791 NC_009697.1 3829271 3829345 R tRNA-Glu complement(3829271..3829345) Clostridium botulinum A str. ATCC 19397 8538010 CLB_3792 tRNA CLB_3792 NC_009697.1 3829351 3829426 R tRNA-Thr complement(3829351..3829426) Clostridium botulinum A str. ATCC 19397 8538008 CLB_3793 tRNA CLB_3793 NC_009697.1 3829431 3829507 R tRNA-Asp complement(3829431..3829507) Clostridium botulinum A str. ATCC 19397 8538013 CLB_3702 tRNA CLB_3702 NC_009697.1 3829518 3829593 R tRNA-Val complement(3829518..3829593) Clostridium botulinum A str. ATCC 19397 5396915 CLB_3703 tRNA CLB_3703 NC_009697.1 3829611 3829685 R tRNA-Glu complement(3829611..3829685) Clostridium botulinum A str. ATCC 19397 5397300 CLB_0008 rRNA rrsA NC_009697.1 9282 10783 D 16S ribosomal RNA 9282..10783 Clostridium botulinum A str. ATCC 19397 5395166 CLB_0011 rRNA rrlA NC_009697.1 11004 13905 D 23S ribosomal RNA 11004..13905 Clostridium botulinum A str. ATCC 19397 5395380 CLB_0012 rRNA rrfA NC_009697.1 13997 14113 D 5S ribosomal RNA 13997..14113 Clostridium botulinum A str. ATCC 19397 5394566 CLB_0055 rRNA rrsB NC_009697.1 48468 49969 D 16S ribosomal RNA 48468..49969 Clostridium botulinum A str. ATCC 19397 5395750 CLB_0058 rRNA rrlB NC_009697.1 50191 53092 D 23S ribosomal RNA 50191..53092 Clostridium botulinum A str. ATCC 19397 5397177 CLB_0059 rRNA rrfB NC_009697.1 53214 53330 D 5S ribosomal RNA 53214..53330 Clostridium botulinum A str. ATCC 19397 5394565 CLB_0062 rRNA rrsC NC_009697.1 55096 56597 D 16S ribosomal RNA 55096..56597 Clostridium botulinum A str. ATCC 19397 5396188 CLB_0065 rRNA rrlC NC_009697.1 56818 59719 D 23S ribosomal RNA 56818..59719 Clostridium botulinum A str. ATCC 19397 5395525 CLB_0066 rRNA rrfC NC_009697.1 59852 59968 D 5S ribosomal RNA 59852..59968 Clostridium botulinum A str. ATCC 19397 5395379 CLB_0070 rRNA rrsE NC_009697.1 63040 64541 D 16S ribosomal RNA 63040..64541 Clostridium botulinum A str. ATCC 19397 5394717 CLB_0073 rRNA rrlE NC_009697.1 64763 67664 D 23S ribosomal RNA 64763..67664 Clostridium botulinum A str. ATCC 19397 5396864 CLB_0074 rRNA rrfE NC_009697.1 67717 67833 D 5S ribosomal RNA 67717..67833 Clostridium botulinum A str. ATCC 19397 5397287 CLB_0077 rRNA rrsF NC_009697.1 69322 70823 D 16S ribosomal RNA 69322..70823 Clostridium botulinum A str. ATCC 19397 5395951 CLB_0080 rRNA rrlF NC_009697.1 71045 73946 D 23S ribosomal RNA 71045..73946 Clostridium botulinum A str. ATCC 19397 5396903 CLB_0081 rRNA rrfF NC_009697.1 74052 74168 D 5S ribosomal RNA 74052..74168 Clostridium botulinum A str. ATCC 19397 5395526 CLB_0440 rRNA rrsG NC_009697.1 453975 455476 D 16S ribosomal RNA 453975..455476 Clostridium botulinum A str. ATCC 19397 5396309 CLB_0445 rRNA rrlG NC_009697.1 455851 458752 D 23S ribosomal RNA 455851..458752 Clostridium botulinum A str. ATCC 19397 5395700 CLB_0446 rRNA rrfG NC_009697.1 458885 459001 D 5S ribosomal RNA 458885..459001 Clostridium botulinum A str. ATCC 19397 5396904 CLB_3577 rRNA rrfH NC_009697.1 3722167 3722283 R 5S ribosomal RNA complement(3722167..3722283) Clostridium botulinum A str. ATCC 19397 5395177 CLB_3578 rRNA rrlH NC_009697.1 3722376 3725276 R 23S ribosomal RNA complement(3722376..3725276) Clostridium botulinum A str. ATCC 19397 5394904 CLB_3582 rRNA rrsH NC_009697.1 3725513 3727014 R 16S ribosomal RNA complement(3725513..3727014) Clostridium botulinum A str. ATCC 19397 5396101 CLB_3586 rRNA rrfI NC_009697.1 3727405 3727521 R 5S ribosomal RNA complement(3727405..3727521) Clostridium botulinum A str. ATCC 19397 5395633 CLB_3587 rRNA rrlI NC_009697.1 3727614 3730515 R 23S ribosomal RNA complement(3727614..3730515) Clostridium botulinum A str. ATCC 19397 5396865 CLB_3590 rRNA rrsI NC_009697.1 3730737 3732238 R 16S ribosomal RNA complement(3730737..3732238) Clostridium botulinum A str. ATCC 19397 5395573