-- dump date 20140619_043100 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 413999000001 SEQ_END SEQ_END NC_009495.1 3886916 3886916 DR NC_009495.1; contig end 3886916..3886916 Clostridium botulinum A str. ATCC 3502 413999000002 SEQ_END SEQ_END NC_009496.1 16344 16344 DR NC_009496.1; contig end 16344..16344 Clostridium botulinum A str. ATCC 3502 YP_001252553.1 CDS dnaA NC_009495.1 1 1347 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1..1347 Clostridium botulinum A str. ATCC 3502 5187220 YP_001252554.1 CDS dnaG NC_009495.1 1610 2713 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 1610..2713 Clostridium botulinum A str. ATCC 3502 5187702 YP_001252555.1 CDS CBO0003 NC_009495.1 2732 2938 D Similar to Clostridium perfringens hypothetical protein Cpe0003 SWALL:Q8XPG0 (EMBL:AP003185) (68 aa) fasta scores: E(): 5.1e-16, 66.17 38d in 68 aa, and to Clostridium acetobutylicum small protein,ortholog of yaaa b.subtilis cac0003 SWALL:Q97N33 (EMBL:AE007513) (68 aa) fasta scores: E(): 1.2e-14, 64.7 id in 68 aa; S4 domain-containing protein 2732..2938 Clostridium botulinum A str. ATCC 3502 5187892 YP_001252556.1 CDS recF NC_009495.1 2998 4101 D Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 2998..4101 Clostridium botulinum A str. ATCC 3502 5184259 YP_001252557.1 CDS CBO0005 NC_009495.1 4122 4385 D Similar to Clostridium perfringens hypothetical protein Cpe0005 SWALL:Q8XPF8 (EMBL:AP003185) (86 aa) fasta scores: E(): 3.2e-26, 84.7 38d in 85 aa, and to Clostridium acetobutylicum orfx SWALL:P94603 (EMBL:U35453) (87 aa) fasta scores: E(): 2.5e-25, 82.55 38d in 86 aa; hypothetical protein 4122..4385 Clostridium botulinum A str. ATCC 3502 5184260 YP_001252558.1 CDS gyrB NC_009495.1 4403 6316 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 4403..6316 Clostridium botulinum A str. ATCC 3502 5184261 YP_001252559.1 CDS gyrA NC_009495.1 6342 8852 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 6342..8852 Clostridium botulinum A str. ATCC 3502 5184262 YP_001252560.1 CDS CBO0008 NC_009495.1 14427 14879 D Similar to Clostridium tetani protein ctc00088 SWALL:Q899T0 (EMBL:AE015936) (167 aa) fasta scores: E(): 8.1e-17, 40.78 38d in 152 aa, and to Clostridium acetobutylicum predicted hd superfamily hydrolase cac0008 SWALL:Q97N30 (EMBL:AE007514) (158 aa) fasta scores: E(): 3.6e-16, 45.27 38d in 148 aa; hypothetical protein 14427..14879 Clostridium botulinum A str. ATCC 3502 5184263 YP_001252561.1 CDS CBO0009 NC_009495.1 14895 15416 D Similar to Clostridium acetobutylicum uncharacterized protein, ortholog of yrxa b.subtilis cac0009 SWALL:Q97N29 (EMBL:AE007514) (171 aa) fasta scores: E(): 1.1e-34, 57.31 38d in 171 aa, and to Clostridium tetani transcriptional regulator ctc00087 SWALL:Q899T1 (EMBL:AE015936) (170 aa) fasta scores: E(): 1.4e-30, 53.25 38d in 169 aa; transcriptional regulator 14895..15416 Clostridium botulinum A str. ATCC 3502 5184264 YP_001252562.1 CDS CBO0010 NC_009495.1 15517 16581 D Similar to Methanobacterium thermoautotrophicum hypothetical protein Mth772 SWALL:O26866 (EMBL:AE000856) (375 aa) fasta scores: E(): 2.1e-24, 31.88 38d in 345 aa,and to Methanosarcina mazei iron-sulfur cluster-binding protein mm0611 SWALL:Q8PZ83 (EMBL:AE013286) (376 aa) fasta scores: E(): 7.6e-22, 31.37 38d in 357 aa; (Fe-S)-binding protein 15517..16581 Clostridium botulinum A str. ATCC 3502 5187658 YP_001252563.1 CDS CBO0011 NC_009495.1 16586 19267 D Similar to Clostridium tetani membrane protein ctc00086 SWALL:Q899T2 (EMBL:AE015936) (887 aa) fasta scores: E(): 2.6e-191, 56.71 38d in 894 aa, and to Clostridium acetobutylicum hypothetical protein Cac0010 SWALL:Y010_CLOAB (SWALL:Q97N28) (906 aa) fasta scores: E(): 6.1e-198, 56.57 38d in 905 aa; hypothetical protein 16586..19267 Clostridium botulinum A str. ATCC 3502 5184266 YP_001252564.1 CDS CBO0012 NC_009495.1 19404 20180 D Similar to Clostridium acetobutylicum uncharacterized of erfk family cac0011 SWALL:Q97N27 (EMBL:AE007514) (286 aa) fasta scores: E(): 2.6e-20, 34.52 38d in 281 aa; ErfK/YbiS/YcfS/YnhG family protein 19404..20180 Clostridium botulinum A str. ATCC 3502 5184267 YP_001252565.1 CDS CBO0013 NC_009495.1 20205 21602 D Similar to Clostridium acetobutylicum predicted dehydrogenase with iron-sulfur domain cac0012 SWALL:Q97N26 (EMBL:AE007514) (467 aa) fasta scores: E(): 1.2e-65,44.63 38d in 475 aa, and to Clostridium tetani dehydrogenase, fad-dependent ctc00083 SWALL:Q899T4 (EMBL:AE015936) (475 aa) fasta scores: E(): 2.7e-91,55.48 38d in 465 aa; dehydrogenase 20205..21602 Clostridium botulinum A str. ATCC 3502 5184268 YP_001252566.1 CDS CBO0014 NC_009495.1 21619 21972 D Similar to Clostridium tetani protein ctc00082 SWALL:Q899T5 (EMBL:AE015936) (133 aa) fasta scores: E(): 1.6e-25, 59.01 38d in 122 aa, and to Clostridium acetobutylicum uncharacterized small protein, ortholog of t.maritima cac0013 SWALL:Q97N25 (EMBL:AE007514) (76 aa) fasta scores: E(): 3.4e-16, 76.38 id in 72 aa; hypothetical protein 21619..21972 Clostridium botulinum A str. ATCC 3502 5184269 YP_001252567.1 CDS serS NC_009495.1 22342 23622 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 22342..23622 Clostridium botulinum A str. ATCC 3502 5184271 YP_001252568.1 CDS CBO0020 NC_009495.1 26601 26963 D exported protein 26601..26963 Clostridium botulinum A str. ATCC 3502 5187493 YP_001252569.1 CDS CBO0021 NC_009495.1 27036 27884 D Similar to Bacillus halodurans ABC transporter bh0179 SWALL:Q9KGC5 (EMBL:AP001507) (220 aa) fasta scores: E(): 1.6e-29, 42.13 38d in 216 aa, and to Streptococcus pneumoniae ABC transporter ATP-binding protein sp0707 SWALL:Q97RT3 (EMBL:AE007379) (215 aa) fasta scores: E(): 3.2e-28, 45.14 38d in 206 aa; ABC transporter ATP-binding protein 27036..27884 Clostridium botulinum A str. ATCC 3502 5187222 YP_001252570.1 CDS CBO0022 NC_009495.1 27893 28726 D Similar to Staphylococcus epidermidis membrane spanning protein se0213 SWALL:Q8CQC3 (EMBL:AE016744) (257 aa) fasta scores: E(): 0.022, 24.1 38d in 224 aa, and to Bacillus cereus bacitracin transport permease bcrb bc5399 SWALL:Q814M8 (EMBL:AE017015) (330 aa) fasta scores: E(): 0.17, 21.07 38d in 261 aa; hypothetical protein 27893..28726 Clostridium botulinum A str. ATCC 3502 5187701 YP_001252571.1 CDS CBO0023 NC_009495.1 28738 29541 D Similar to Clostridium tetani membrane-spanning permease ctp35 SWALL:Q899X9 (EMBL:AF528097) (269 aa) fasta scores: E(): 0.0012, 24.26 id in 272 aa, and to Bacillus subtilis hypothetical protein yybm yybm or bsu40590 SWALL:YYBM_BACSU (SWALL:P37491) (251 aa) fasta scores: E(): 0.0018, 23.95 id in 263 aa; hypothetical protein 28738..29541 Clostridium botulinum A str. ATCC 3502 5187814 YP_001252572.1 CDS CBO0024 NC_009495.1 29558 30370 D Similar to Clostridium tetani membrane-spanning permease ctp34 SWALL:Q899Y0 (EMBL:AF528097) (271 aa) fasta scores: E(): 5.6e-08,25.67 38d in 261 aa, and to Bacillus subtilis hypothetical protein yybm yybm or bsu40590 SWALL:YYBM_BACSU (SWALL:P37491) (251 aa) fasta scores: E(): 0.0006, 23.93 id in 259 aa; hypothetical protein 29558..30370 Clostridium botulinum A str. ATCC 3502 5184279 YP_001252573.1 CDS psd2 NC_009495.1 30610 31497 R catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase complement(30610..31497) Clostridium botulinum A str. ATCC 3502 5184280 YP_001252574.1 CDS CBO0026 NC_009495.1 31600 33198 R Similar to Clostridium pasteurianum hypothetical protein in hydrogenase 1 5'region SWALL:YHG1_CLOPA (SWALL:Q46189) (530 aa) fasta scores: E(): 5.7e-112,59.81 38d in 530 aa, and to Clostridium acetobutylicum ABC1 family protein kinase cac0033 SWALL:Q97N06 (EMBL:AE007516) (532 aa) fasta scores: E(): 1.5e-109,57.84 38d in 529 aa; hypothetical protein complement(31600..33198) Clostridium botulinum A str. ATCC 3502 5184281 YP_001252575.1 CDS CBO0027 NC_009495.1 33274 33594 R Similar to Clostridium acetobutylicum hypothetical protein Cac0034 SWALL:Q97N05 (EMBL:AE007517) (101 aa) fasta scores: E(): 3.8e-11, 48.51 38d in 101 aa, and to Clostridium perfringens hypothetical protein Cpe2529 SWALL:Q8XHF6 (EMBL:AP003194) (112 aa) fasta scores: E(): 4.4e-08, 42.85 38d in 112 aa; hypothetical protein complement(33274..33594) Clostridium botulinum A str. ATCC 3502 5184282 YP_001252576.1 CDS CBO0028 NC_009495.1 33989 35527 D Similar to Clostridium beijerinckii signal-transduction and transcriptional-control protein Stc SWALL:STC_CLOBE (SWALL:P26047) (632 aa) fasta scores: E(): 6.9e-53, 40.21 38d in 460 aa, and to Clostridium tetani transcriptional regulator ctc02531 SWALL:Q890V4 (EMBL:AE015944) (519 aa) fasta scores: E(): 9.9e-83,50.58 38d in 514 aa; sensory box sigma-54 dependent transcriptional regulator 33989..35527 Clostridium botulinum A str. ATCC 3502 5184283 YP_001252577.1 CDS mdeA NC_009495.1 35687 36889 D catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine; methionine gamma-lyase 35687..36889 Clostridium botulinum A str. ATCC 3502 5187938 YP_001252578.1 CDS CBO0030 NC_009495.1 37013 37450 D Similar to Clostridium acetobutylicum cytosine deaminase cac0123 SWALL:Q97MR8 (EMBL:AE007525) (147 aa) fasta scores: E(): 1.8e-35, 63.88 38d in 144 aa, and to Clostridium tetani cytosine deaminase ctc00078 SWALL:Q899T9 (EMBL:AE015936) (146 aa) fasta scores: E(): 3.3e-35, 60.56 38d in 142 aa; cytidine/deoxycytidylate deaminase 37013..37450 Clostridium botulinum A str. ATCC 3502 5187939 YP_001252579.1 CDS dnaH NC_009495.1 38095 39720 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 38095..39720 Clostridium botulinum A str. ATCC 3502 5184286 YP_001252580.1 CDS CBO0032 NC_009495.1 39785 40126 D Similar to Clostridium tetani transcriptional regulatory protein ctc00074 SWALL:Q899U2 (EMBL:AE015936) (113 aa) fasta scores: E(): 3.4e-29, 76.99 38d in 113 aa,and to Clostridium acetobutylicum hypothetical upf0133 protein Cac0126 SWALL:Y126_CLOAB (SWALL:Q97MR5) (112 aa) fasta scores: E(): 6.8e-27, 72.32 38d in 112 aa; hypothetical protein 39785..40126 Clostridium botulinum A str. ATCC 3502 5187213 YP_001252581.1 CDS recR NC_009495.1 40159 40755 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 40159..40755 Clostridium botulinum A str. ATCC 3502 5187947 YP_001252582.1 CDS CBO0034 NC_009495.1 40785 41075 D Similar to Thermoanaerobacter tengcongensis hypothetical protein Tte0043 SWALL:Q8RDI2 (EMBL:AE012979) (90 aa) fasta scores: E(): 2e-05, 42.02 38d in 69 aa, and to Clostridium perfringens hypothetical protein Cpe0048 SWALL:Q8XPB7 (EMBL:AP003185) (92 aa) fasta scores: E(): 2.8e-05, 37.8 38d in 82 aa; hypothetical protein 40785..41075 Clostridium botulinum A str. ATCC 3502 5186987 YP_001252583.1 CDS bofA NC_009495.1 41225 41485 D Similar to Bacillus subtilis sigma-K factor processing regulatory protein BofA or bsu00230 SWALL:BOFA_BACSU (SWALL:P24282) (87 aa) fasta scores: E(): 0.0036, 32.92 38d in 82 aa, and to Clostridium acetobutylicum BofA b.subtilis ortholog, sigmak-factor processing regulatory protein cac0129 SWALL:Q97MR2 (EMBL:AE007525) (90 aa) fasta scores: E(): 2.3e-14, 54.76 id in 84 aa; sigma-K factor processing regulatory protein BofA 41225..41485 Clostridium botulinum A str. ATCC 3502 5187909 YP_001252584.1 CDS sfsA NC_009495.1 41636 42328 D Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A 41636..42328 Clostridium botulinum A str. ATCC 3502 5184291 YP_001252585.1 CDS CBO0037 NC_009495.1 42384 42872 D Similar to Clostridium tetani predicted NADH pyrophosphatase ctc00069 SWALL:Q899U7 (EMBL:AE015936) (175 aa) fasta scores: E(): 5.5e-45, 70 38d in 160 aa, and to Clostridium acetobutylicum N-terminal Zn-ribbon domain and C-terminal MutT domain, yjad ortholog cac0145 SWALL:Q97MP7 (EMBL:AE007526) (174 aa) fasta scores: E(): 4.7e-34,54.37 38d in 160 aa; hydrolase, NUDIX family 42384..42872 Clostridium botulinum A str. ATCC 3502 5184292 YP_001252586.1 CDS CBO0038 NC_009495.1 42990 43712 D Similar to Clostridium acetobutylicum predicted enzyme with TIM-barrel fold cac0148 SWALL:Q97MP4 (EMBL:AE007526) (228 aa) fasta scores: E(): 1.9e-61,73.79 38d in 229 aa, and to Thermoanaerobacter tengcongensis hypothetical protein Tte2521 SWALL:Q8R798 (EMBL:AE013193) (227 aa) fasta scores: E(): 7.2e-52, 69.3 id in 215 aa; hypothetical protein 42990..43712 Clostridium botulinum A str. ATCC 3502 5184293 YP_001252587.1 CDS CBO0039 NC_009495.1 43846 44634 D Similar to Clostridium tetani polyferredoxin ctc00067 SWALL:Q899U9 (EMBL:AE015936) (258 aa) fasta scores: E(): 2.3e-44, 50.95 38d in 263 aa, and to Clostridium acetobutylicum polyferredoxin cac2657 SWALL:Q97FS0 (EMBL:AE007763) (249 aa) fasta scores: E(): 4.7e-20, 35.65 38d in 258 aa; (Fe-S)-binding protein 43846..44634 Clostridium botulinum A str. ATCC 3502 5184294 YP_001252588.1 CDS CBO0040 NC_009495.1 45197 45901 D Similar to Clostridium tetani dinucleotide-utilizing enzyme ctc00868 SWALL:Q896X5 (EMBL:AE015939) (246 aa) fasta scores: E(): 1.3e-49,58.75 38d in 240 aa, and to Clostridium acetobutylicum dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis family 1 cac0908 SWALL:Q97KK9 (EMBL:AE007606) (251 aa) fasta scores: E(): 6.3e-46,58.87 38d in 248 aa; thiF domain-containing protein 45197..45901 Clostridium botulinum A str. ATCC 3502 5184295 YP_001252589.1 CDS CBO0041 NC_009495.1 45960 47093 D Similar to Clostridium perfringens hypothetical protein Cpe0058 SWALL:Q8XPA7 (EMBL:AP003185) (388 aa) fasta scores: E(): 1.7e-59, 40.9 38d in 374 aa, and to Caulobacter crescentus transporter cc1133 SWALL:Q9A961 (EMBL:AE005791) (411 aa) fasta scores: E(): 4.9e-14, 23.01 38d in 352 aa; major facilitator superfamily protein 45960..47093 Clostridium botulinum A str. ATCC 3502 5184296 YP_001252590.1 CDS CBO0042 NC_009495.1 47122 48066 D Similar to Clostridium acetobutylicum ribosomal-protein-alanine acetyltransferase cac0152 SWALL:Q97MP0 (EMBL:AE007527) (312 aa) fasta scores: E(): 4.1e-60, 49.2 38d in 315 aa, and to Clostridium perfringens probable ribosomal-protein cpe0059 SWALL:Q8XPA6 (EMBL:AP003185) (312 aa) fasta scores: E(): 1.9e-53, 45.77 38d in 308 aa, and to Escherichia coli,Escherichia coli O157:H7, and Shigella flexneri ribosomal-protein-alanine acetyltransferase RimJ or b1066 or z1703 or ecs1444 or sf1072 or s1150 SWALL:RIMJ_ECOLI (SWALL:P09454) (194 aa) fasta scores: E(): 3.4e-14, 39.39 id in 165 aa; GNAT family acetyltransferase 47122..48066 Clostridium botulinum A str. ATCC 3502 5184297 YP_001252591.1 CDS CBO0042A NC_009495.1 53621 54217 R Similar to Clostridium acetobutylicum uracyl DNA glycosilase cac0219 SWALL:Q97MH9 (EMBL:AE007535) (199 aa) fasta scores: E(): 5.7e-53, 67 38d in 197 aa, and to Clostridium tetani DNA polymerase, bacteriophage-type ctc00062 SWALL:Q899V2 (EMBL:AE015936) (173 aa) fasta scores: E(): 8.9e-41, 64.88 38d in 168 aa; uracil-DNA glycosylase complement(53621..54217) Clostridium botulinum A str. ATCC 3502 5204361 YP_001252592.1 CDS CBO0043 NC_009495.1 60532 61095 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 60532..61095 Clostridium botulinum A str. ATCC 3502 5184298 YP_001252593.1 CDS CBO0043A NC_009495.1 61092 62534 D Similar to Clostridium tetani protein ctc01787 SWALL:Q893M8 (EMBL:AE015942) (477 aa) fasta scores: E(): 5.7e-98, 58.62 38d in 481 aa, and to Bacillus anthracis domain protein ba1754 SWALL:Q81SB1 (EMBL:AE017029) (366 aa) fasta scores: E(): 9.9e-18, 27.1 id in 380 aa; hypothetical protein 61092..62534 Clostridium botulinum A str. ATCC 3502 5204252 YP_001252594.1 CDS CBO0045 NC_009495.1 68655 68936 D hypothetical protein 68655..68936 Clostridium botulinum A str. ATCC 3502 5184300 YP_001252595.1 CDS CBO0047 NC_009495.1 75254 75997 D peptidil-prolyl isomerase 75254..75997 Clostridium botulinum A str. ATCC 3502 5184302 YP_001252596.1 CDS CBO0048 NC_009495.1 81736 82479 D Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 81736..82479 Clostridium botulinum A str. ATCC 3502 5184303 YP_001252597.1 CDS CBO0049 NC_009495.1 82665 83573 R Similar to Clostridium acetobutylicum MccF-like protein cac0293 SWALL:Q97MA5 (EMBL:AE007544) (306 aa) fasta scores: E(): 1.5e-62, 56.18 38d in 299 aa, and to Clostridium perfringens hypothetical protein Cpe2458 SWALL:Q8XHM5 (EMBL:AP003194) (302 aa) fasta scores: E(): 3.3e-38, 47.81 38d in 297 aa; LD-carboxypeptidase complement(82665..83573) Clostridium botulinum A str. ATCC 3502 5184304 YP_001252598.1 CDS CBO0050 NC_009495.1 83609 84550 R Similar to Clostridium perfringens probable transport protein cpe2457 SWALL:Q8XHM6 (EMBL:AP003194) (314 aa) fasta scores: E(): 1.1e-77, 69.1 38d in 314 aa,and to Clostridium acetobutylicum magnesium and cobalt transporter cac0294 SWALL:Q97MA4 (EMBL:AE007544) (315 aa) fasta scores: E(): 1.1e-77, 66.03 38d in 315 aa; transporter CorA metal ion transporter family complement(83609..84550) Clostridium botulinum A str. ATCC 3502 5186993 YP_001252599.1 CDS CBO0051 NC_009495.1 84915 85418 D Similar to Clostridium tetani protein ctc00217 SWALL:Q899G2 (EMBL:AE015936) (166 aa) fasta scores: E(): 3.1e-22, 42.51 38d in 167 aa, and to Clostridium perfringens hypothetical protein Cpe2456 SWALL:Q8XHM7 (EMBL:AP003194) (165 aa) fasta scores: E(): 4.5e-18, 38.12 38d in 160 aa; hypothetical protein 84915..85418 Clostridium botulinum A str. ATCC 3502 5187462 YP_001252600.1 CDS CBO0052 NC_009495.1 85423 86583 R Similar to Staphylococcus aureus HmrA or mw2057 SWALL:Q8NVF8 (EMBL:AP004829) (394 aa) fasta scores: E(): 4.7e-30, 28.68 38d in 387 aa, and to Clostridium tetani amidohydrolase ctc00218 SWALL:Q899G1 (EMBL:AE015936) (392 aa) fasta scores: E(): 1.3e-71, 50.39 38d in 383 aa, and to Escherichia coli aminobenzoyl-glutamate utilization protein b abgb or b1337 SWALL:ABGB_ECOLI (SWALL:P76052) (481 aa) fasta scores: E(): 0.0002, 25.46 38d in 326 aa; amidohydrolase complement(85423..86583) Clostridium botulinum A str. ATCC 3502 5184307 YP_001252601.1 CDS CBO0052A NC_009495.1 86837 87049 D hypothetical protein 86837..87049 Clostridium botulinum A str. ATCC 3502 5204253 YP_001252602.1 CDS CBO0053 NC_009495.1 87028 88476 D Similar to Bacillus subtilis lysine decarboxylase Cad or bsu14630 SWALL:DCLY_BACSU (SWALL:P21885) (490 aa) fasta scores: E(): 1.9e-43, 31.13 38d in 485 aa, and to Clostridium acetobutylicum lysine decarboxylase cac0297 SWALL:Q97MA1 (EMBL:AE007544) (481 aa) fasta scores: E(): 7.2e-94, 53.95 38d in 480 aa; Orn/Lys/Arg decarboxylase 87028..88476 Clostridium botulinum A str. ATCC 3502 5184308 YP_001252603.1 CDS CBO0054 NC_009495.1 88500 89195 D Similar to Clostridium tetani thymidylate kinase ctc00220 SWALL:Q899F9 (EMBL:AE015936) (228 aa) fasta scores: E(): 5.8e-52, 62.16 38d in 222 aa, and to Fusobacterium nucleatum subsp. vincentii ATCC 49256 thymidylate kinase fnv0225 SWALL:EAA23262 (EMBL:AABF01000172) (228 aa) fasta scores: E(): 9.6e-42,51.54 38d in 227 aa; thymidylate kinase 88500..89195 Clostridium botulinum A str. ATCC 3502 5187831 YP_001252604.1 CDS CBO0055 NC_009495.1 89276 89605 D Similar to Clostridium acetobutylicum protein from nitrogen regulatory protein P-II cac0299 SWALL:Q97M99 (EMBL:AE007544) (109 aa) fasta scores: E(): 4.1e-29,76.14 38d in 109 aa, and to Clostridium perfringens hypothetical protein Cpe2450 SWALL:Q8XHN3 (EMBL:AP003194) (109 aa) fasta scores: E(): 7.9e-23, 60.55 38d in 109 aa; hypothetical protein 89276..89605 Clostridium botulinum A str. ATCC 3502 5184310 YP_001252605.1 CDS CBO0056 NC_009495.1 89623 90567 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 89623..90567 Clostridium botulinum A str. ATCC 3502 5184311 YP_001252606.1 CDS CBO0057 NC_009495.1 90569 91483 D Similar to Treponema pallidum Tpl protein or tp0046 SWALL:TPL_TREPA (SWALL:P45685) (233 aa) fasta scores: E(): 5.7e-21, 37.68 38d in 207 aa, and to Clostridium tetani Tpl protein ctc00222 SWALL:Q899F7 (EMBL:AE015936) (302 aa) fasta scores: E(): 6.2e-79, 72.36 38d in 304 aa; PSP1 domain-containing protein 90569..91483 Clostridium botulinum A str. ATCC 3502 5187499 YP_001252607.1 CDS CBO0058 NC_009495.1 91495 91698 D Similar to Pseudomonas sp periplasmic mercuric ion binding protein MerP SWALL:Q936U4 (EMBL:Y18360) (92 aa) fasta scores: E(): 0.64, 36.95 38d in 46 aa, and to Clostridium acetobutylicum predicted metal-binding protein of ferredoxin fold cac0302 SWALL:Q97M96 (EMBL:AE007544) (67 aa) fasta scores: E(): 7.5e-09, 43.28 38d in 67 aa; hypothetical protein 91495..91698 Clostridium botulinum A str. ATCC 3502 5184313 YP_001252608.1 CDS CBO0059 NC_009495.1 91780 91950 D Similar to Clostridium pasteurianum ferredoxin SWALL:FER_CLOPA (SWALL:P00195) (55 aa) fasta scores: E(): 1.6e-18, 90.9 38d in 55 aa; ferredoxin, 4Fe-4S 91780..91950 Clostridium botulinum A str. ATCC 3502 5184314 YP_001252609.1 CDS CBO0060 NC_009495.1 92071 92811 D Similar to Clostridium acetobutylicum SAM-dependent methyltransferase cac0306 SWALL:Q97M92 (EMBL:AE007545) (244 aa) fasta scores: E(): 1e-56, 61.47 38d in 244 aa,and to Clostridium perfringens hypothetical protein Cpe0279 SWALL:Q8XNQ3 (EMBL:AP003186) (256 aa) fasta scores: E(): 1e-52, 57.61 38d in 243 aa; hypothetical protein 92071..92811 Clostridium botulinum A str. ATCC 3502 5184315 YP_001252610.1 CDS CBO0061 NC_009495.1 92831 93685 D Similar to Clostridium tetani corrin/porphyrin methyltransferase ctc00226 SWALL:Q899F5 (EMBL:AE015936) (281 aa) fasta scores: E(): 2.6e-62, 63.79 38d in 279 aa,and to Clostridium perfringens hypothetical protein Cpe0280 SWALL:Q8XNQ2 (EMBL:AP003186) (280 aa) fasta scores: E(): 9.9e-63, 64.02 38d in 278 aa; tetrapyrrole methylase 92831..93685 Clostridium botulinum A str. ATCC 3502 5184316 YP_001252611.1 CDS CBO0062 NC_009495.1 93841 94944 D Similar to Listeria monocytogenes p45 precursor spl or lmo2505 SWALL:Q9RE04 (EMBL:AJ250194) (401 aa) fasta scores: E(): 2.4e-15, 31.18 38d in 388 aa, and to Clostridium acetobutylicum cell wall-associated hydrolase cac0308 SWALL:Q97M90 (EMBL:AE007545) (392 aa) fasta scores: E(): 2.2e-27, 36.84 38d in 380 aa; NlpC/P60 family protein 93841..94944 Clostridium botulinum A str. ATCC 3502 5187467 YP_001252612.1 CDS abrB NC_009495.1 95044 95289 R Similar to Bacillus subtilis transition state regulatory protein AbrB or CpsX or bsu00370 SWALL:ABRB_BACSU (SWALL:P08874) (96 aa) fasta scores: E(): 1.4e-12, 74.19 38d in 62 aa, and to Clostridium acetobutylicum transition state regulatory protein AbrB cac3647 SWALL:Q97D34 (EMBL:AE007860) (81 aa) fasta scores: E(): 1.2e-26, 90.12 38d in 81 aa; AbrB family transcriptional regulator complement(95044..95289) Clostridium botulinum A str. ATCC 3502 5184318 YP_001252613.1 CDS CBO0064 NC_009495.1 96096 96707 D Similar to Clostridium perfringens hypothetical protein Cpe0282 SWALL:Q8XNQ0 (EMBL:AP003186) (199 aa) fasta scores: E(): 9.2e-42, 63.59 38d in 195 aa, and to Clostridium acetobutylicum uncharacterized protein homolog ykrk b. subtilis cac0314 SWALL:Q97M84 (EMBL:AE007546) (197 aa) fasta scores: E(): 6.5e-41, 59.89 38d in 187 aa; hypothetical protein 96096..96707 Clostridium botulinum A str. ATCC 3502 5184319 YP_001252614.1 CDS arcA1 NC_009495.1 97129 98340 D Similar to Enterococcus faecalis arginine deiminase ArcA or ef0104 SWALL:Q93K67 (EMBL:AJ312276) (408 aa) fasta scores: E(): 1.6e-80, 55.06 38d in 405 aa, and to Bacillus licheniformis arginine deiminase ArcA SWALL:ARCA_BACLI (SWALL:O86131) (413 aa) fasta scores: E(): 3.7e-77, 51.22 id in 408 aa; Also similar to CBO1587 (57.03 38d).; arginine deiminase 97129..98340 Clostridium botulinum A str. ATCC 3502 5184320 YP_001252615.1 CDS ispF NC_009495.1 98426 98893 R catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(98426..98893) Clostridium botulinum A str. ATCC 3502 5184321 YP_001252616.1 CDS CBO0067 NC_009495.1 98969 99301 R hypothetical protein complement(98969..99301) Clostridium botulinum A str. ATCC 3502 5184322 YP_001252617.1 CDS CBO0068 NC_009495.1 99629 100498 D Similar to Clostridium tetani polysaccharide deacetylase ctc00229 SWALL:Q899F2 (EMBL:AE015936) (293 aa) fasta scores: E(): 4.7e-50,52.05 38d in 292 aa, and to Clostridium acetobutylicum predicted xylanase/chitin deacetilase, similar to yxkh b.subtilis cac0436 SWALL:Q97LW8 (EMBL:AE007558) (295 aa) fasta scores: E(): 8.6e-38, 47.03 38d in 253 aa; polysaccharide deacetylase 99629..100498 Clostridium botulinum A str. ATCC 3502 5184323 YP_001252618.1 CDS CBO0069 NC_009495.1 100767 101009 R Similar to Clostridium acetobutylicum predicted metal-binding protein cac0438 SWALL:Q97LW6 (EMBL:AE007558) (80 aa) fasta scores: E(): 1.4e-16, 53.75 38d in 80 aa. No similarity to any other protein in the database.; hypothetical protein complement(100767..101009) Clostridium botulinum A str. ATCC 3502 5184324 YP_001252619.1 CDS spmA NC_009495.1 101129 101704 D Similar to Bacillus subtilis spore maturation protein A SpmA or bsu23180 SWALL:SPMA_BACSU (SWALL:P35157) (196 aa) fasta scores: E(): 6.1e-26, 40.83 38d in 191 aa,and to Clostridium tetani spore maturation protein A ctc00238 SWALL:Q899E4 (EMBL:AE015936) (197 aa) fasta scores: E(): 3.7e-46, 61.78 38d in 191 aa; spore maturation protein A 101129..101704 Clostridium botulinum A str. ATCC 3502 5184325 YP_001252620.1 CDS spmB NC_009495.1 101717 102235 D Similar to Bacillus subtilis spore maturation protein B SpmB or bsu23170 SWALL:SPMB_BACSU (SWALL:P35158) (179 aa) fasta scores: E(): 4.1e-25, 41.61 38d in 173 aa,and to Clostridium acetobutylicum spore maturation protein B cac0470 SWALL:Q97LT4 (EMBL:AE007561) (173 aa) fasta scores: E(): 2.7e-45, 69.59 38d in 171 aa; spore maturation protein B 101717..102235 Clostridium botulinum A str. ATCC 3502 5184326 YP_001252621.1 CDS CBO0072 NC_009495.1 102480 103817 R Similar to Vibrio parahaemolyticus multidrug resistance protein NorM or vp1479 SWALL:NORM_VIBPA (SWALL:O82855) (456 aa) fasta scores: E(): 8.1e-23, 26.57 id in 414 aa, and to Clostridium tetani Na+ driven multidrug efflux pump ctc01799 SWALL:Q893L8 (EMBL:AE015942) (455 aa) fasta scores: E(): 6.5e-93,52.71 38d in 442 aa; MATE efflux family protein complement(102480..103817) Clostridium botulinum A str. ATCC 3502 5184327 YP_001252622.1 CDS CBO0073 NC_009495.1 103961 104533 D Similar to Clostridium tetani DNA polymerase,bacteriophage-type ctc00242 SWALL:Q899E0 (EMBL:AE015936) (188 aa) fasta scores: E(): 1e-52, 63.97 38d in 186 aa,and to Thermoanaerobacter tengcongensis uracil-DNA glycosylase tte0077 SWALL:Q8RDF7 (EMBL:AE012981) (186 aa) fasta scores: E(): 4.2e-42, 56.21 38d in 185 aa; uracil-DNA glycosylase 103961..104533 Clostridium botulinum A str. ATCC 3502 5184328 YP_001252623.1 CDS CBO0074 NC_009495.1 104562 104996 D Similar to Bacillus subtilis organic hydroperoxide resistance transcriptional regulator OhrR or bsu13150 SWALL:OHRR_BACSU (SWALL:O34777) (147 aa) fasta scores: E(): 0.00012, 27.27 38d in 143 aa, and to Staphylococcus aureus hypothetical protein sav2386 or sa2174 SWALL:Q99RP3 (EMBL:AP003365) (148 aa) fasta scores: E(): 1.4e-05,28.87 38d in 142 aa; MarR family transcriptional regulator 104562..104996 Clostridium botulinum A str. ATCC 3502 5187572 YP_001252624.1 CDS metG NC_009495.1 105378 107315 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 105378..107315 Clostridium botulinum A str. ATCC 3502 5184330 YP_001252625.1 CDS CBO0076 NC_009495.1 107480 108985 D Similar to Clostridium perfringens hypothetical protein Cpe2521 SWALL:Q8XHG4 (EMBL:AP003194) (499 aa) fasta scores: E(): 1.5e-43, 34.32 38d in 507 aa, and to Listeria monocytogenes hypothetical protein Lmo2224 SWALL:Q8Y552 (EMBL:AL591982) (377 aa) fasta scores: E(): 1.6e-08, 23.49 38d in 498 aa; hypothetical protein 107480..108985 Clostridium botulinum A str. ATCC 3502 5184331 YP_001252626.1 CDS CBO0077 NC_009495.1 109136 109930 D Similar to Clostridium acetobutylicum php superfamily hydrolase, yabd ortholog cac2989 SWALL:Q97EW7 (EMBL:AE007795) (253 aa) fasta scores: E(): 1e-64, 68.65 id in 252 aa, and to Clostridium perfringens hypothetical protein Cpe2520 SWALL:Q8XHG5 (EMBL:AP003194) (256 aa) fasta scores: E(): 1e-61, 63.92 38d in 255 aa; TatD family hydrolase 109136..109930 Clostridium botulinum A str. ATCC 3502 5184332 YP_001252627.1 CDS CBO0079 NC_009495.1 110158 111216 D Similar to Clostridium tetani hypothetical membrane associated protein ctc00245 SWALL:Q899D7 (EMBL:AE015936) (368 aa) fasta scores: E(): 2.6e-61, 54.98 38d in 351 aa; 3D/G5 domain protein 110158..111216 Clostridium botulinum A str. ATCC 3502 5184334 YP_001252628.1 CDS CBO0080 NC_009495.1 111289 111834 D Similar to Clostridium acetobutylicum primase-like protein, containing toprim domain, yabf b.subtilis ortholog cac2987 SWALL:Q97EW9 (EMBL:AE007795) (185 aa) fasta scores: E(): 7.2e-43, 71.34 38d in 178 aa; primase-like protein 111289..111834 Clostridium botulinum A str. ATCC 3502 5184335 YP_001252629.1 CDS ksgA NC_009495.1 111827 112663 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 111827..112663 Clostridium botulinum A str. ATCC 3502 5184336 YP_001252630.1 CDS CBO0082 NC_009495.1 112742 113983 D Similar to Clostridium tetani protein ctc00249 SWALL:Q899D4 (EMBL:AE015936) (438 aa) fasta scores: E(): 3.8e-27, 45.7 38d in 431 aa, and to Clostridium acetobutylicum hypothetical protein Cac2985 SWALL:Q97EX1 (EMBL:AE007795) (491 aa) fasta scores: E(): 5.8e-27, 40.65 38d in 487 aa; hypothetical protein 112742..113983 Clostridium botulinum A str. ATCC 3502 5184337 YP_001252631.1 CDS CBO0083 NC_009495.1 114140 114727 D Similar to Clostridium acetobutylicum hypothetical protein Cac2984 SWALL:Q97EX2 (EMBL:AE007795) (221 aa) fasta scores: E(): 6.8e-24, 36.92 38d in 195 aa, and to Clostridium tetani membrane-associated protein ctc00250 SWALL:Q899D3 (EMBL:AE015936) (196 aa) fasta scores: E(): 6.2e-19, 34.02 38d in 194 aa; hypothetical protein 114140..114727 Clostridium botulinum A str. ATCC 3502 5184338 YP_001252632.1 CDS CBO0084 NC_009495.1 114896 115729 D Similar to Clostridium tetani protein ctc00252 SWALL:Q899D1 (EMBL:AE015936) (279 aa) fasta scores: E(): 2e-49, 52.51 38d in 278 aa, and to Clostridium acetobutylicum hypothetical protein Cac2983 cac2983 SWALL:Q97EX3 (EMBL:AE007795) (284 aa) fasta scores: E(): 1.4e-40, 45.93 38d in 283 aa; lipoprotein 114896..115729 Clostridium botulinum A str. ATCC 3502 5184339 YP_001252633.1 CDS CBO0085 NC_009495.1 115897 116958 D Similar to Thermoanaerobacter tengcongensis membrane-fusion protein acra2 or tte1200 SWALL:Q8RAL3 (EMBL:AE013082) (390 aa) fasta scores: E(): 1.4e-23,37.98 38d in 387 aa, and to Clostridium tetani membrane-associated protein ctc00484 SWALL:Q898G8 (EMBL:AE015937) (437 aa) fasta scores: E(): 9e-15, 25.87 id in 429 aa; macrolide ABC transporter 115897..116958 Clostridium botulinum A str. ATCC 3502 5184340 YP_001252634.1 CDS CBO0086 NC_009495.1 116969 117664 D Similar to Clostridium tetani ABC transporter ATP-binding protein ctc00485 SWALL:Q898G7 (EMBL:AE015937) (238 aa) fasta scores: E(): 1.8e-49, 64.31 38d in 227 aa,and to Thermoanaerobacter tengcongensis ABC-type transport systems, involved in lipoprotein release, ATPase components phnl2 or tte1199 SWALL:Q8RAL4 (EMBL:AE013082) (231 aa) fasta scores: E(): 9e-49, 62.55 38d in 227 aa; macrolide ABC transporter ATP-binding protein 116969..117664 Clostridium botulinum A str. ATCC 3502 5184341 YP_001252635.1 CDS CBO0087 NC_009495.1 117661 118869 D Similar to Clostridium tetani ABC transporter permease ctc00486 SWALL:Q898G6 (EMBL:AE015937) (404 aa) fasta scores: E(): 1e-60, 47.66 38d in 407 aa,and to Thermoanaerobacter tengcongensis ABC-type transport systems, involved in lipoprotein release, permease components tte1198 SWALL:Q8RAL5 (EMBL:AE013082) (405 aa) fasta scores: E(): 4.1e-65, 50.73 38d in 406 aa; macrolide ABC transporter permease 117661..118869 Clostridium botulinum A str. ATCC 3502 5184342 YP_001252636.1 CDS CBO0088 NC_009495.1 118951 119793 D Similar to Escherichia coli, and Escherichia coli O6 Mrp protein or b2113 or c2641 SWALL:MRP_ECOLI (SWALL:P21590) (369 aa) fasta scores: E(): 6.7e-31, 42.33 id in 248 aa, and to Clostridium tetani Mrp protein ctc00253 SWALL:Q899D0 (EMBL:AE015936) (280 aa) fasta scores: E(): 8.9e-72, 73.4 38d in 282 aa; ATP/GTP-binding-like protein 118951..119793 Clostridium botulinum A str. ATCC 3502 5184343 YP_001252637.1 CDS CBO0089 NC_009495.1 119933 120124 D Similar to Thermotoga maritima ferredoxin Fdx or tm0927 SWALL:FER_THEMA (SWALL:P46797) (60 aa) fasta scores: E(): 0.00016, 38.98 38d in 59 aa, and to Clostridium perfringens ferredoxin Fer or cpe2511 SWALL:Q8XHH3 (EMBL:AP003194) (62 aa) fasta scores: E(): 3.4e-07, 45.76 38d in 59 aa; (Fe-S)-binding protein 119933..120124 Clostridium botulinum A str. ATCC 3502 5184344 YP_001252638.1 CDS CBO0090 NC_009495.1 120139 120333 D Similar to Borrelia turicatae repeat motif protein BdrA6- SWALL:Q9RGH2 (EMBL:AF128449) (62 aa) fasta scores: E(): 2.8, 36.36 38d in 55 aa, and to Plasmodium yoelii yoelii hypothetical protein py07231 SWALL:EAA19615 (EMBL:AABL01002604) (76 aa) fasta scores: E(): 2.7, 31.25 id in 48 aa; hypothetical protein 120139..120333 Clostridium botulinum A str. ATCC 3502 5184345 YP_001252639.1 CDS CBO0091 NC_009495.1 120570 120746 R hypothetical protein complement(120570..120746) Clostridium botulinum A str. ATCC 3502 5184346 YP_001252640.1 CDS CBO0092 NC_009495.1 120824 121894 D Similar to Clostridium tetani signaling protein ctc01837 SWALL:Q893I5 (EMBL:AE015942) (449 aa) fasta scores: E(): 1.8e-10, 26.93 38d in 427 aa, and to Shewanella oneidensis cyclic nucleotide phosphodiesterase,so3556 SWALL:Q8EBG2 (EMBL:AE015792) (420 aa) fasta scores: E(): 3.6e-15, 24.37 38d in 357 aa; diguanylate cyclase 120824..121894 Clostridium botulinum A str. ATCC 3502 5184347 YP_001252641.1 CDS CBO0093 NC_009495.1 121951 122679 D Similar to Bacillus subtilis SapB protein or bsu06650 SWALL:SAPB_BACSU (SWALL:Q45514) (232 aa) fasta scores: E(): 7.7e-13, 28.15 38d in 206 aa, and to Clostridium perfringens probable Mg2+ transport protein cpe0592 SWALL:Q8XMU6 (EMBL:AP003187) (241 aa) fasta scores: E(): 1.2e-27, 39.24 38d in 237 aa; Mg2+ transporter 121951..122679 Clostridium botulinum A str. ATCC 3502 5184348 YP_001252642.1 CDS nrdD NC_009495.1 122969 125110 D Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 122969..125110 Clostridium botulinum A str. ATCC 3502 5184349 YP_001252643.1 CDS nrdG NC_009495.1 125127 125642 D Similar to Escherichia coli, and Escherichia coli O157:H7 anaerobic ribonucleoside-triphosphate reductase activating protein NrdG or b4237 or z5847 or ecs5214 SWALL:NRDG_ECOLI (SWALL:P39329) (154 aa) fasta scores: E(): 1.3e-09, 34.24 38d in 146 aa, and to Clostridium tetani anaerobic ribonucleoside-triphosphate reductase activating protein ctc00258 SWALL:Q899C6 (EMBL:AE015936) (169 aa) fasta scores: E(): 2.1e-34, 61.58 38d in 164 aa; anaerobic ribonucleoside-triphosphate reductase activating protein 125127..125642 Clostridium botulinum A str. ATCC 3502 5187457 YP_001252644.1 CDS CBO0096 NC_009495.1 126179 126853 R Similar to Clostridium acetobutylicum membrane protein cap0154 SWALL:Q97TF0 (EMBL:AE001438) (225 aa) fasta scores: E(): 3.1e-26, 39.64 38d in 222 aa, and to Bacillus cereus hypothetical protein bc4207 SWALL:Q818P2 (EMBL:AE017011) (226 aa) fasta scores: E(): 4.2e-06,24.31 38d in 218 aa; hypothetical protein complement(126179..126853) Clostridium botulinum A str. ATCC 3502 5184351 YP_001252645.1 CDS CBO0097 NC_009495.1 126855 127193 R Similar to Clostridium acetobutylicum predicted transcriptional regulator cap0153 SWALL:Q97TF1 (EMBL:AE001438) (115 aa) fasta scores: E(): 2.3e-29,73.45 38d in 113 aa, and to Clostridium tetani transcriptional regulator PadR or ctc00601 SWALL:Q897X0 (EMBL:AE015938) (106 aa) fasta scores: E(): 3.6e-20,52.88 38d in 104 aa; PadR family transcriptional regulator complement(126855..127193) Clostridium botulinum A str. ATCC 3502 5184352 YP_001252646.1 CDS CBO0098 NC_009495.1 127314 127952 R Similar to Clostridium acetobutylicum Zn-dependent hydrolases of the metallo-beta-lactamase superfamily cac0482 SWALL:Q97LS2 (EMBL:AE007563) (211 aa) fasta scores: E(): 2e-35, 44.07 38d in 211 aa, and to Thermoanaerobacter tengcongensis predicted Zn-dependent hydrolases of the beta-lactamase fold tte2532 SWALL:Q8R787 (EMBL:AE013195) (212 aa) fasta scores: E(): 1.4e-31, 44.5 id in 200 aa; zinc-dependent hydrolase complement(127314..127952) Clostridium botulinum A str. ATCC 3502 5184353 YP_001252647.1 CDS ileS NC_009495.1 128388 131510 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase 128388..131510 Clostridium botulinum A str. ATCC 3502 5184354 YP_001252648.1 CDS ccpA NC_009495.1 131661 132659 D Similar to Clostridium saccharobutylicum hth-type transcriptional regulator RegA or RepA SWALL:REGA_CLOSA (SWALL:Q45831) (332 aa) fasta scores: E(): 1.2e-72, 65.75 id in 330 aa, and to Bacillus megaterium glucose-resistance amylase regulator CcpA SWALL:CCPA_BACME (SWALL:P46828) (332 aa) fasta scores: E(): 3.2e-45, 44.61 id in 334 aa; LacI family transcriptional regulator 131661..132659 Clostridium botulinum A str. ATCC 3502 5184355 YP_001252649.1 CDS CBO0101 NC_009495.1 132875 136927 D Similar to Clostridium tetani DNA helicase ctc00264 SWALL:Q899C1 (EMBL:AE015936) (1352 aa) fasta scores: E(): 1e-180, 40.17 38d in 1359 aa, and to Clostridium acetobutylicum superfamily i DNA helicase cac3036 SWALL:Q97ES1 (EMBL:AE007800) (1351 aa) fasta scores: E(): 2.2e-177, 41.54 38d in 1343 aa; hypothetical protein 132875..136927 Clostridium botulinum A str. ATCC 3502 5184356 YP_001252650.1 CDS CBO0102 NC_009495.1 137002 138069 D Similar to Escherichia coli mannose-1-phosphate guanylyltransferase manc or rfbm or rfbm1 SWALL:RFM9_ECOLI (SWALL:P37753) (471 aa) fasta scores: E(): 5.4e-36, 36.51 id in 356 aa, and to Clostridium tetani mannose-6-phosphate isomerase ctc00265 SWALL:Q899C0 (EMBL:AE015936) (355 aa) fasta scores: E(): 5.9e-94,70.33 38d in 354 aa; mannose-1-phosphate guanylyltransferase 137002..138069 Clostridium botulinum A str. ATCC 3502 5184357 YP_001252651.1 CDS CBO0103 NC_009495.1 138405 139694 D Similar to Clostridium acetobutylicum hypothetical upf0272 protein Cac0774 SWALL:Y774_CLOAB (SWALL:Q97KZ2) (420 aa) fasta scores: E(): 5e-86, 59.19 38d in 424 aa,and to Wolinella succinogenes hypothetical protein ws0139 SWALL:CAE09302 (EMBL:BX571657) (396 aa) fasta scores: E(): 4e-48, 44.26 38d in 427 aa; hypothetical protein 138405..139694 Clostridium botulinum A str. ATCC 3502 5184358 YP_001252652.1 CDS CBO0104 NC_009495.1 139699 140505 D Similar to Clostridium acetobutylicum ATP-utilizing enzyme of the pp-loop superfamily cac0775 SWALL:Q97KZ1 (EMBL:AE007592) (271 aa) fasta scores: E(): 9.6e-58,59.62 38d in 265 aa, and to Thermoanaerobacter tengcongensis ATP-utilizing enzymes of the pp-loop superfamily tte0769 SWALL:Q8RBP5 (EMBL:AE013044) (255 aa) fasta scores: E(): 7.3e-44, 54.09 38d in 244 aa; hypothetical protein 139699..140505 Clostridium botulinum A str. ATCC 3502 5184359 YP_001252653.1 CDS CBO0105 NC_009495.1 140525 141271 D Similar to Myxococcus xanthus phosphoribosyl amino imidizole carboxylase-like protein SWALL:Q8VQZ2 (EMBL:AF449411) (250 aa) fasta scores: E(): 2.7e-43,52.43 38d in 246 aa, and to Clostridium acetobutylicum ncair mutase cac0776 SWALL:Q97KZ0 (EMBL:AE007592) (248 aa) fasta scores: E(): 4.2e-63, 71.37 38d in 248 aa; hypothetical protein 140525..141271 Clostridium botulinum A str. ATCC 3502 5187683 YP_001252654.1 CDS CBO0106 NC_009495.1 141496 142878 D Similar to Clostridium tetani Fe-s oxidoreductase ctc00266 SWALL:Q899B9 (EMBL:AE015936) (460 aa) fasta scores: E(): 2.1e-137, 71.08 38d in 460 aa, and to Clostridium acetobutylicum moaa/nirj family fe-s oxidoreductase cac2791 SWALL:Q97FE9 (EMBL:AE007776) (461 aa) fasta scores: E(): 2.8e-119, 61.6 38d in 461 aa; radical SAM domain protein 141496..142878 Clostridium botulinum A str. ATCC 3502 5187866 YP_001252655.1 CDS CBO0107 NC_009495.1 143065 144339 D Similar to Agrobacterium radiobacter lactose-binding protein precursor LacE SWALL:LACE_AGRRD (SWALL:P29822) (422 aa) fasta scores: E(): 1.9e-12, 21.24 id in 386 aa, and to Clostridium acetobutylicum sugar-binding periplasmic protein cac2912 SWALL:Q97F41 (EMBL:AE007788) (432 aa) fasta scores: E(): 4.3e-18,22.63 38d in 433 aa; sugar-binding protein 143065..144339 Clostridium botulinum A str. ATCC 3502 5184362 YP_001252656.1 CDS CBO0108 NC_009495.1 144441 145556 R Similar to Escherichia coli mannosyltransferase B MtfB SWALL:Q47594 (EMBL:D43637) (381 aa) fasta scores: E(): 2.5e-24, 30.58 38d in 291 aa, and to Clostridium tetani mannosyltransferase ctc00268 SWALL:Q899B7 (EMBL:AE015936) (374 aa) fasta scores: E(): 2.1e-77,55.94 38d in 370 aa; Also similar to the nearby CDS, CBO0113, (44.892 ide. in 372 aa overlap); glycosyl transferase family protein complement(144441..145556) Clostridium botulinum A str. ATCC 3502 5187650 YP_001252657.1 CDS CBO0109 NC_009495.1 145722 146732 D Similar to Bacillus subtilis spore coat protein S CotS or bsu30900 SWALL:COTS_BACSU (SWALL:P46914) (351 aa) fasta scores: E(): 4.6e-06, 19.63 38d in 331 aa, and to Clostridium acetobutylicum spore coat protein CotS related cac2910 SWALL:Q97F43 (EMBL:AE007788) (335 aa) fasta scores: E(): 3.8e-69, 52.25 38d in 333 aa; spore coat protein 145722..146732 Clostridium botulinum A str. ATCC 3502 5184364 YP_001252658.1 CDS CBO0110 NC_009495.1 146747 146941 D hypothetical protein 146747..146941 Clostridium botulinum A str. ATCC 3502 5184365 YP_001252659.1 CDS CBO0111 NC_009495.1 146968 147735 D Similar to Clostridium tetani spore coat protein ctc00270 SWALL:Q899B5 (EMBL:AE015936) (256 aa) fasta scores: E(): 1.2e-19, 35.84 38d in 226 aa, and to Clostridium acetobutylicum spore coat protein CotS related cac2909 SWALL:Q97F44 (EMBL:AE007788) (251 aa) fasta scores: E(): 1.5e-18, 31.78 38d in 258 aa; hypothetical protein 146968..147735 Clostridium botulinum A str. ATCC 3502 5184366 YP_001252660.1 CDS CBO0112 NC_009495.1 147748 148761 D Similar to Bacillus subtilis spore coat protein S CotS or bsu30900 SWALL:COTS_BACSU (SWALL:P46914) (351 aa) fasta scores: E(): 5.4e-11, 25.43 38d in 342 aa, and to Clostridium acetobutylicum spore coat protein CotS related cac2908 SWALL:Q97F45 (EMBL:AE007788) (344 aa) fasta scores: E(): 6.1e-61, 49.84 38d in 331 aa. Also similar to CBO0114 (32.390 38d), CBO0109 (32.537) and to CBO0111 (21.756).; spore coat protein 147748..148761 Clostridium botulinum A str. ATCC 3502 5187990 YP_001252661.1 CDS CBO0113 NC_009495.1 149116 150243 R Similar to Escherichia coli mannosyltransferase B MtfB SWALL:Q47594 (EMBL:D43637) (381 aa) fasta scores: E(): 8.8e-32, 32.55 38d in 384 aa, and to Clostridium tetani mannosyltransferase ctc00272 SWALL:Q899B3 (EMBL:AE015936) (384 aa) fasta scores: E(): 1.5e-84,60.85 38d in 373 aa; Also similar to the nearby CDS, CBO0108, (44.892 ide. in 372 aa overlap); glycosyl transferase family protein complement(149116..150243) Clostridium botulinum A str. ATCC 3502 5187515 YP_001252662.1 CDS CBO0114 NC_009495.1 150360 151364 D Similar to Bacillus subtilis YtaA protein SWALL:O34656 (EMBL:Z99119) (357 aa) fasta scores: E(): 1.3e-20, 28.1 38d in 306 aa, and to Clostridium tetani spore coat protein ctc00273 SWALL:Q899B2 (EMBL:AE015936) (337 aa) fasta scores: E(): 8.4e-95, 71.85 38d in 334 aa. Also similar to CBO0112 (32.390 38d), CBO0109 (31.077).; spore coat protein CotS 150360..151364 Clostridium botulinum A str. ATCC 3502 5187070 YP_001252663.1 CDS CBO0115 NC_009495.1 151488 152390 D Similar to Clostridium tetani protein ctc00279 SWALL:Q899A6 (EMBL:AE015936) (300 aa) fasta scores: E(): 3.5e-69, 65.21 38d in 299 aa, and to Clostridium acetobutylicum uncharacterized protein, yabg b.subtilis ortholog cac2905 SWALL:Q97F48 (EMBL:AE007788) (300 aa) fasta scores: E(): 8.1e-69, 61.79 38d in 301 aa; peptidase 151488..152390 Clostridium botulinum A str. ATCC 3502 5187836 YP_001252664.1 CDS CBO0116 NC_009495.1 152586 152822 D Similar to Bacillus subtilis Veg protein or bsu00440 SWALL:VEG_BACSU (SWALL:P37466) (86 aa) fasta scores: E(): 5.9e-12, 52.77 38d in 72 aa, and to Clostridium acetobutylicum uncharacterized protein, Veg b.subtilis ortholog cac2904 SWALL:Q97F49 (EMBL:AE007788) (78 aa) fasta scores: E(): 3.2e-18, 69.73 38d in 76 aa; hypothetical protein 152586..152822 Clostridium botulinum A str. ATCC 3502 5187532 YP_001252665.1 CDS CBO0117 NC_009495.1 152927 154489 D Similar to Clostridium tetani protein ctc00280 SWALL:Q899A5 (EMBL:AE015936) (520 aa) fasta scores: E(): 8e-105, 53.07 38d in 520 aa, and to Clostridium acetobutylicum lysm domain containing membrane protein cac2903 SWALL:Q97F50 (EMBL:AE007787) (520 aa) fasta scores: E(): 1.9e-86, 45.76 38d in 520 aa; LysM domain-containing protein 152927..154489 Clostridium botulinum A str. ATCC 3502 5184372 YP_001252666.1 CDS cphB NC_009495.1 154869 155669 D Similar to Synechococcus elongatus cyanophycinase CphB or tlr2169 SWALL:CPHB_SYNEL (SWALL:Q9F2I8) (322 aa) fasta scores: E(): 3.5e-32, 38.28 38d in 256 aa, and to Clostridium tetani cyanophycinase ctc00281 SWALL:Q899A4 (EMBL:AE015936) (268 aa) fasta scores: E(): 8e-68, 69.58 id in 263 aa; cyanophycinase 154869..155669 Clostridium botulinum A str. ATCC 3502 5184374 YP_001252667.1 CDS cphA NC_009495.1 155713 158334 D catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase 155713..158334 Clostridium botulinum A str. ATCC 3502 5184375 YP_001252668.1 CDS ipk NC_009495.1 158427 159269 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 158427..159269 Clostridium botulinum A str. ATCC 3502 5184376 YP_001252669.1 CDS CBO0122 NC_009495.1 159435 159632 D Similar to Thermoanaerobacter tengcongensis hypothetical protein Tte2556 tte2556 SWALL:Q8R768 (EMBL:AE013196) (80 aa) fasta scores: E(): 1.3, 32.75 38d in 58 aa; hypothetical protein 159435..159632 Clostridium botulinum A str. ATCC 3502 5187651 YP_001252670.1 CDS CBO0123 NC_009495.1 159692 161212 D Similar to Bacillus cereus spore germination protein GerlA SWALL:Q93N70 (EMBL:AF387344) (492 aa) fasta scores: E(): 7.4e-71, 40.43 38d in 502 aa, and to Clostridium tetani spore germination protein b1 ctc00285 SWALL:Q899A1 (EMBL:AE015936) (492 aa) fasta scores: E(): 3.1e-111, 64.34 38d in 502 aa; spore germination protein 159692..161212 Clostridium botulinum A str. ATCC 3502 5184378 YP_001252671.1 CDS CBO0124 NC_009495.1 161232 162329 D Similar to Bacillus subtilis spore germination protein A2 GerAb or GerA2 or bsu33060 SWALL:GRAB_BACSU (SWALL:P07869) (365 aa) fasta scores: E(): 4.9e-24, 27.92 id in 351 aa, and to Clostridium tetani spore germination protein A2 ctc00286 SWALL:Q899A0 (EMBL:AE015936) (369 aa) fasta scores: E(): 1.3e-72, 50.13 38d in 363 aa; spore germination protein 161232..162329 Clostridium botulinum A str. ATCC 3502 5184379 YP_001252672.1 CDS CBO0125 NC_009495.1 162379 163560 D Similar to Bacillus cereus spore germination protein GerlC SWALL:Q93N68 (EMBL:AF387344) (390 aa) fasta scores: E(): 1.8e-14, 27.36 38d in 402 aa, and to Clostridium tetani spore germination protein A3 ctc00287 SWALL:Q898Z9 (EMBL:AE015936) (394 aa) fasta scores: E(): 1.6e-56, 37.72 38d in 395 aa; germination protein, Ger(x)C family 162379..163560 Clostridium botulinum A str. ATCC 3502 5184380 YP_001252673.1 CDS CBO0126 NC_009495.1 163633 164265 D Similar to Bacillus subtilis stage II sporulation protein R SpoIIR or Ipc-27d or bsu36970 SWALL:SP2R_BACSU (SWALL:P39151) (224 aa) fasta scores: E(): 1.9e-18, 35.71 id in 224 aa, and to Clostridium perfringens stage II sporulation protein R SpoIIR or cpe2211 SWALL:Q8XIB0 (EMBL:AP003193) (209 aa) fasta scores: E(): 1.5e-37,55.34 38d in 206 aa; stage II sporulation protein R 163633..164265 Clostridium botulinum A str. ATCC 3502 5184381 YP_001252674.1 CDS CBO0127 NC_009495.1 164302 165543 R Similar to Clostridium tetani 1,2-diacylglycerol 3-glucosyltransferase ctc00289 SWALL:Q898Z7 (EMBL:AE015936) (389 aa) fasta scores: E(): 1.7e-81,59.38 38d in 389 aa, and to Clostridium acetobutylicum predicted udp-glucuronosyltransferase, ypfp b/subtilis ortholog cac2897 SWALL:Q97F56 (EMBL:AE007787) (384 aa) fasta scores: E(): 4.3e-80, 59.53 38d in 383 aa; hypothetical protein complement(164302..165543) Clostridium botulinum A str. ATCC 3502 5184382 YP_001252675.1 CDS CBO0128 NC_009495.1 165916 167286 D Similar to Bacillus subtilis sporulation protein YpeB or JoeB or bsu22920 SWALL:YPEB_BACSU (SWALL:P38490) (450 aa) fasta scores: E(): 1e-27, 26.57 38d in 444 aa,and to Clostridium tetani membrane-associated protein ctc00290 SWALL:Q898Z6 (EMBL:AE015936) (455 aa) fasta scores: E(): 2.7e-92, 57.54 38d in 457 aa; germination protein YpeB 165916..167286 Clostridium botulinum A str. ATCC 3502 5184383 YP_001252676.1 CDS CBO0129 NC_009495.1 167389 168369 D Similar to Clostridium tetani protein ctc00292 SWALL:Q898Z4 (EMBL:AE015936) (326 aa) fasta scores: E(): 7.2e-89, 71.77 38d in 326 aa, and to Clostridium perfringens hypothetical protein Cpe2210 cpe2210 SWALL:Q8XIB1 (EMBL:AP003193) (326 aa) fasta scores: E(): 1.1e-78, 67.79 38d in 326 aa; hypothetical protein 167389..168369 Clostridium botulinum A str. ATCC 3502 5184384 YP_001252677.1 CDS CBO0130 NC_009495.1 168394 168822 D Similar to Clostridium tetani protein ctc00293 SWALL:Q898Z3 (EMBL:AE015936) (143 aa) fasta scores: E(): 1.5e-24, 54.22 38d in 142 aa, and to Clostridium acetobutylicum uncharacterized protein, ywib b.subtilis homolog cac2894 SWALL:Q97F59 (EMBL:AE007787) (137 aa) fasta scores: E(): 1.7e-20, 52.55 38d in 137 aa; hypothetical protein 168394..168822 Clostridium botulinum A str. ATCC 3502 5184385 YP_001252678.1 CDS CBO0131 NC_009495.1 168954 169253 D Similar to Clostridium tetani hypothetical protein ctc00294 SWALL:Q898Z2 (EMBL:AE015936) (113 aa) fasta scores: E(): 3.3e-15, 49 38d in 100 aa, and to Clostridium acetobutylicum hypothetical protein Cac2893 SWALL:Q97F60 (EMBL:AE007787) (95 aa) fasta scores: E(): 1.9e-09, 36.66 id in 90 aa; hypothetical protein 168954..169253 Clostridium botulinum A str. ATCC 3502 5184386 YP_001252679.1 CDS pyrG NC_009495.1 169487 171088 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 169487..171088 Clostridium botulinum A str. ATCC 3502 5187472 YP_001252680.1 CDS CBO0133 NC_009495.1 171527 171880 D Similar to Clostridium tetani hypothetical protein ctc00295 SWALL:Q898Z1 (EMBL:AE015936) (120 aa) fasta scores: E(): 3.3e-08, 32.45 38d in 114 aa; hypothetical protein 171527..171880 Clostridium botulinum A str. ATCC 3502 5187911 YP_001252681.1 CDS rho NC_009495.1 172052 173497 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 172052..173497 Clostridium botulinum A str. ATCC 3502 5184389 YP_001252682.1 CDS rpmE NC_009495.1 173537 173755 R Similar to Escherichia coli, and Escherichia coli O157:H7 50S ribosomal protein L31 RpmE or b3936 or z5484 or ecs4863 SWALL:RL31_ECOLI (SWALL:P02432) (70 aa) fasta scores: E(): 6.4e-12, 50.74 38d in 67 aa, and to Clostridium perfringens 50S ribosomal protein L31 RpmE or cpe2205 SWALL:RL31_CLOPE (SWALL:Q8XIB6) (68 aa) fasta scores: E(): 5.7e-23, 85.07 38d in 67 aa; 50S ribosomal protein L31 complement(173537..173755) Clostridium botulinum A str. ATCC 3502 5184390 YP_001252683.1 CDS tdK NC_009495.1 173982 174557 D catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 173982..174557 Clostridium botulinum A str. ATCC 3502 5184391 YP_001252684.1 CDS CBO0137 NC_009495.1 174574 175491 D Similar to Clostridium acetobutylicum uncharacterized protein, predicted metal-dependent enzyme, yqhq b.subtilis ortholog cac2886 SWALL:Q97F66 (EMBL:AE007786) (317 aa) fasta scores: E(): 6.8e-73, 60.39 38d in 308 aa, and to Clostridium tetani protein ctc00300 SWALL:Q898Y7 (EMBL:AE015936) (249 aa) fasta scores: E(): 2.2e-65, 67.33 38d in 248 aa; hypothetical protein 174574..175491 Clostridium botulinum A str. ATCC 3502 5184392 YP_001252685.1 CDS CBO0138 NC_009495.1 175499 176350 D Similar to Escherichia coli, and Shigella flexneri protein methyltransferase HemK or b1212 or sf1215 or s1299 SWALL:HEMK_ECOLI (SWALL:P37186) (277 aa) fasta scores: E(): 2.3e-16, 30.88 38d in 259 aa, and to Clostridium tetani methyltransferase ctc00301 SWALL:Q898Y6 (EMBL:AE015936) (292 aa) fasta scores: E(): 1.1e-58,58.69 38d in 276 aa; protein methyltransferase 175499..176350 Clostridium botulinum A str. ATCC 3502 5184393 YP_001252686.1 CDS prfA NC_009495.1 176432 177508 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 176432..177508 Clostridium botulinum A str. ATCC 3502 5184394 YP_001252687.1 CDS CBO0140 NC_009495.1 177536 178144 D Similar to Clostridium tetani hypothetical membrane protein ctc00303 SWALL:Q898Y4 (EMBL:AE015936) (200 aa) fasta scores: E(): 1.4e-28, 46.19 38d in 197 aa, and to Clostridium acetobutylicum predicted membrane protein cac2883 SWALL:Q97F69 (EMBL:AE007785) (192 aa) fasta scores: E(): 1.2e-26, 40.1 38d in 197 aa; hypothetical protein 177536..178144 Clostridium botulinum A str. ATCC 3502 5184395 YP_001252688.1 CDS CBO0141 NC_009495.1 178204 178923 D Similar to Escherichia coli, Escherichia coli O6,and Escherichia coli O157:H7 zinc transporter ZupTt or b3040 or c3789 or z4397 or ecs3928 SWALL:ZUPT_ECOLI (SWALL:P24198) (257 aa) fasta scores: E(): 3.9e-08, 27.53 id in 247 aa, and to Clostridium tetani zinc uptake transporter ctc00304 SWALL:Q898Y3 (EMBL:AE015936) (236 aa) fasta scores: E(): 8.5e-49, 53.81 38d in 236 aa; ZIP transporter family protein 178204..178923 Clostridium botulinum A str. ATCC 3502 5184396 YP_001252689.1 CDS CBO0142 NC_009495.1 178944 179999 D Similar to Clostridium acetobutylicum predicted translation factor cac2882 SWALL:Q97F70 (EMBL:AE007785) (350 aa) fasta scores: E(): 3.6e-85, 68.57 38d in 350 aa,and to Clostridium tetani sua5 protein ctc00305 SWALL:Q898Y2 (EMBL:AE015936) (350 aa) fasta scores: E(): 5.9e-83, 66.28 38d in 350 aa; Sua5/YciO/YrdC/YwlC family protein 178944..179999 Clostridium botulinum A str. ATCC 3502 5184397 YP_001252690.1 CDS CBO0143 NC_009495.1 180008 180460 D Similar to Acinetobacter johnsonii low molecular weight protein-tyrosine-phosphatase Ptp SWALL:PTP_ACIJO (SWALL:O52787) (142 aa) fasta scores: E(): 4.2e-06, 33.59 id in 128 aa, and to Clostridium tetani phosphotyrosine protein phosphatase ctc00306 SWALL:Q898Y1 (EMBL:AE015936) (154 aa) fasta scores: E(): 1.9e-24, 54.05 38d in 148 aa; low molecular weight protein tyrosine phosphatase 180008..180460 Clostridium botulinum A str. ATCC 3502 5184398 YP_001252691.1 CDS rpiB NC_009495.1 180520 180957 D catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 180520..180957 Clostridium botulinum A str. ATCC 3502 5184399 YP_001252692.1 CDS upp NC_009495.1 180987 181616 D Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 180987..181616 Clostridium botulinum A str. ATCC 3502 5184400 YP_001252693.1 CDS CBO0146 NC_009495.1 182123 182611 D Similar to Clostridium tetani comE operon protein 2 ctc00309 SWALL:Q898X8 (EMBL:AE015936) (162 aa) fasta scores: E(): 6.7e-56, 81.48 38d in 162 aa, and to Clostridium acetobutylicum deoxycytidylate deaminase cac2876 SWALL:Q97F76 (EMBL:AE007785) (162 aa) fasta scores: E(): 1.9e-44, 67.28 38d in 162 aa; cytidine/deoxycytidylate deaminase 182123..182611 Clostridium botulinum A str. ATCC 3502 5184401 YP_001252694.1 CDS tagO NC_009495.1 182719 183753 D Similar to Bacillus subtilis probable UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase tago or bsu35530 SWALL:TAGO_BACSU (SWALL:O34753) (358 aa) fasta scores: E(): 7.2e-47, 41.32 id in 346 aa, and to Clostridium tetani UDP-phosphate alpha-N-acetylglucosaminyltransferase ctc00310 SWALL:Q898X7 (EMBL:AE015936) (353 aa) fasta scores: E(): 9e-86, 67.85 38d in 336 aa; UDP-GlcNAc:UDP-P GlcNAc 1-P transferase 182719..183753 Clostridium botulinum A str. ATCC 3502 5184402 YP_001252695.1 CDS mnaA NC_009495.1 183767 184924 D Similar to Bacillus subtilis udp-N-acetylglucosamine 2-epimerase MnaA or bsu35660 SWALL:MNAA_BACSU (SWALL:P39131) (380 aa) fasta scores: E(): 7.6e-76, 56.69 38d in 381 aa, and to Clostridium perfringens udp-N-acetylglucosamine 2-epimerase cpe2196 SWALL:Q8XIC5 (EMBL:AP003193) (384 aa) fasta scores: E(): 2.5e-107, 77.16 38d in 381 aa; UDP-N-acetylglucosamine 2-epimerase 183767..184924 Clostridium botulinum A str. ATCC 3502 5184403 YP_001252696.1 CDS CBO0149 NC_009495.1 185416 185784 D Similar to Anabaena sp. ATP synthase I AtpI or Atp1 or all0011 SWALL:ATPZ_ANASP (SWALL:P12403) (122 aa) fasta scores: E(): 0.95, 21.42 38d in 112 aa, and to Clostridium pasteurianum ATP synthase subunit I AtpI SWALL:Q93Q51 (EMBL:AF283808) (123 aa) fasta scores: E(): 2.7e-07, 32.77 38d in 119 aa; ATP synthase I 185416..185784 Clostridium botulinum A str. ATCC 3502 5187182 YP_001252697.1 CDS atpA NC_009495.1 185799 186479 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A 185799..186479 Clostridium botulinum A str. ATCC 3502 5187574 YP_001252698.1 CDS atpC NC_009495.1 186519 186758 D produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 186519..186758 Clostridium botulinum A str. ATCC 3502 5184406 YP_001252699.1 CDS atpB NC_009495.1 186834 187313 D produces ATP from ADP in the presence of a proton gradient across the membrane; subunit B is part of the membrane proton channel; ATP synthase F0F1 subunit B 186834..187313 Clostridium botulinum A str. ATCC 3502 5184407 YP_001252700.1 CDS atpH NC_009495.1 187316 187855 D Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit delta 187316..187855 Clostridium botulinum A str. ATCC 3502 5184408 YP_001252701.1 CDS atpA NC_009495.1 187866 189380 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 187866..189380 Clostridium botulinum A str. ATCC 3502 5184409 YP_001252702.1 CDS atpG NC_009495.1 189402 190250 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; ATP synthase F0F1 subunit gamma 189402..190250 Clostridium botulinum A str. ATCC 3502 5184410 YP_001252703.1 CDS atpD NC_009495.1 190264 191655 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 190264..191655 Clostridium botulinum A str. ATCC 3502 5187829 YP_001252704.1 CDS atpC NC_009495.1 191680 192081 D produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit epsilon 191680..192081 Clostridium botulinum A str. ATCC 3502 5184412 YP_001252705.1 CDS CBO0158 NC_009495.1 192274 192981 D Similar to Clostridium acetobutylicum predicted membrane protein cac2863 SWALL:Q97F78 (EMBL:AE007784) (235 aa) fasta scores: E(): 2.2e-13, 31.09 38d in 238 aa; hypothetical protein 192274..192981 Clostridium botulinum A str. ATCC 3502 5184413 YP_001252706.1 CDS murA NC_009495.1 193005 194261 D adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 193005..194261 Clostridium botulinum A str. ATCC 3502 5184414 YP_001252707.1 CDS spoIIC NC_009495.1 194531 195607 D Similar to Bacillus subtilis stage ii sporulation protein D SpoIID or spoIIC or bsu36750 SWALL:SP2D_BACSU (SWALL:P07372) (343 aa) fasta scores: E(): 2.9e-17, 35.07 id in 345 aa, and to Clostridium tetani stage II sporulation protein D ctc00315 SWALL:Q898X2 (EMBL:AE015936) (376 aa) fasta scores: E(): 1.9e-56,48.17 38d in 357 aa; stage II sporulation protein D 194531..195607 Clostridium botulinum A str. ATCC 3502 5184415 YP_001252708.1 CDS CBO0161 NC_009495.1 196139 196885 D Similar to Clostridium tetani membrane-associated protein ctc00316 SWALL:Q898X1 (EMBL:AE015936) (271 aa) fasta scores: E(): 1.1e-27, 51.6 id in 250 aa, and to Clostridium perfringens hypothetical protein Cpe2182 cpe2182 SWALL:Q8XID9 (EMBL:AP003193) (256 aa) fasta scores: E(): 1.5e-17, 32.94 38d in 255 aa; peptidase 196139..196885 Clostridium botulinum A str. ATCC 3502 5184416 YP_001252709.1 CDS spoIIID NC_009495.1 196993 197247 D Similar to Bacillus subtilis stage III sporulation protein D SpoIIID or bsu36420 SWALL:SP3D_BACSU (SWALL:P15281) (93 aa) fasta scores: E(): 1.1e-16, 62.65 id in 83 aa, and to Clostridium acetobutylicum stage iii sporulation protein D SpoIIID cac2859 SWALL:Q97F82 (EMBL:AE007783) (84 aa) fasta scores: E(): 9e-24, 89.28 id in 84 aa; stage III sporulation protein D 196993..197247 Clostridium botulinum A str. ATCC 3502 5184417 YP_001252710.1 CDS mreB NC_009495.1 197347 198375 D Similar to Escherichia coli, Escherichia coli O6,Salmonella typhimurium, Salmonella typhi, and Shigella flexneri rod shape-determining protein MreB SWALL:MREB_ECOLI (SWALL:P13519) (347 aa) fasta scores: E(): 4.4e-58, 51.67 38d in 329 aa, and to Clostridium tetani rod shape-determining protein MreB mreb or ctc00318 SWALL:Q898X0 (EMBL:AE015937) (343 aa) fasta scores: E(): 1.4e-89, 76.6 38d in 342 aa; rod shape-determining protein Mbl 197347..198375 Clostridium botulinum A str. ATCC 3502 5187823 YP_001252711.1 CDS CBO0164 NC_009495.1 198500 199024 R Similar to Clostridium acetobutylicum spore protease gpr related protein, yyac b.subtilis ortholog cac2857 SWALL:Q97F84 (EMBL:AE007783) (188 aa) fasta scores: E(): 4e-36, 59.06 38d in 171 aa; hypothetical protein complement(198500..199024) Clostridium botulinum A str. ATCC 3502 5188016 YP_001252712.1 CDS CBO0165 NC_009495.1 199073 199795 R Similar to Clostridium tetani ATPase of the pp-loop superfamily ctc00320 SWALL:Q898W8 (EMBL:AE015937) (236 aa) fasta scores: E(): 5.2e-62, 64.4 38d in 236 aa; hypothetical protein complement(199073..199795) Clostridium botulinum A str. ATCC 3502 5184420 YP_001252713.1 CDS metE NC_009495.1 200776 201951 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 200776..201951 Clostridium botulinum A str. ATCC 3502 5184423 YP_001252714.1 CDS CBO0169 NC_009495.1 202142 204376 D Similar to Clostridium tetani exodeoxyribonuclease v alpha chain ctc00322 SWALL:Q898W6 (EMBL:AE015937) (743 aa) fasta scores: E(): 1.3e-187, 68.18 38d in 745 aa; helicase, RecD/TraA family 202142..204376 Clostridium botulinum A str. ATCC 3502 5184424 YP_001252715.1 CDS CBO0170 NC_009495.1 204402 205424 D Similar to Clostridium tetani protein ctc00323 SWALL:Q898W5 (EMBL:AE015937) (354 aa) fasta scores: E(): 9.6e-44, 38.26 38d in 345 aa; hypothetical protein 204402..205424 Clostridium botulinum A str. ATCC 3502 5184425 YP_001252716.1 CDS CBO0171 NC_009495.1 205451 206074 D Similar to Haemophilus influenzae competence protein F ComF or hi0434 SWALL:COMF_HAEIN (SWALL:P31773) (229 aa) fasta scores: E(): 4.7e-05, 25.83 38d in 209 aa,and to Clostridium acetobutylicum predicted amidophosphoribosyltransferase, ComC b.suntilis ortholog cac2852 SWALL:Q97F89 (EMBL:AE007783) (226 aa) fasta scores: E(): 6.3e-31, 46.63 38d in 208 aa; phosphoribosyl transferase 205451..206074 Clostridium botulinum A str. ATCC 3502 5184426 YP_001252717.1 CDS CBO0172 NC_009495.1 206499 207026 D Similar to Synechococcus sp. light repressed protein A LrtA SWALL:LRTA_SYNP2 (SWALL:P47908) (192 aa) fasta scores: E(): 4.8e-13, 35.97 38d in 189 aa, and to Clostridium tetani ssu ribosomal protein S30P ctc00325 SWALL:Q898W3 (EMBL:AE015937) (176 aa) fasta scores: E(): 1.5e-47, 75.56 38d in 176 aa; ribosomal subunit interface protein 206499..207026 Clostridium botulinum A str. ATCC 3502 5184427 YP_001252718.1 CDS secA NC_009495.1 207254 209761 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 207254..209761 Clostridium botulinum A str. ATCC 3502 5184428 YP_001252719.1 CDS prfB NC_009495.1 210125 211102 D catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA; peptide chain release factor 2 210125..211102 Clostridium botulinum A str. ATCC 3502 5187466 YP_001252720.1 CDS CBO0176 NC_009495.1 211223 212587 R Similar to Bacillus licheniformis leucine aminopeptidase precursor SWALL:Q93EJ5 (EMBL:AF358651) (449 aa) fasta scores: E(): 9.2e-10, 26.85 38d in 417 aa, and to Clostridium acetobutylicum protein containing aminopeptidase domain cac2843 SWALL:Q97F97 (EMBL:AE007782) (449 aa) fasta scores: E(): 9.1e-79, 48.59 38d in 428 aa; peptidase complement(211223..212587) Clostridium botulinum A str. ATCC 3502 5184431 YP_001252721.1 CDS CBO0177 NC_009495.1 212695 214851 D Similar to Clostridium tetani transcription accessory protein ctc00330 SWALL:Q898V8 (EMBL:AE015937) (718 aa) fasta scores: E(): 7.4e-199, 77.99 38d in 718 aa; RNA-binding protein 212695..214851 Clostridium botulinum A str. ATCC 3502 5184432 YP_001252722.1 CDS CBO0178 NC_009495.1 215135 215728 D Similar to Clostridium tetani riboflavin transporter ctc00331 SWALL:Q898V7 (EMBL:AE015937) (204 aa) fasta scores: E(): 5.7e-43, 61.02 38d in 195 aa; hypothetical protein 215135..215728 Clostridium botulinum A str. ATCC 3502 5184433 YP_001252723.1 CDS CBO0179 NC_009495.1 216139 217788 D Similar to Clostridium tetani protein ctc00333 SWALL:Q898V6 (EMBL:AE015937) (511 aa) fasta scores: E(): 8.9e-30, 40.51 38d in 548 aa; hypothetical protein 216139..217788 Clostridium botulinum A str. ATCC 3502 5184434 YP_001252724.1 CDS CBO0180 NC_009495.1 217800 218069 D Similar to Bacillus subtilis YlqH protein ylqH SWALL:O34867 (EMBL:AJ000975) (93 aa) fasta scores: E(): 1.6e-07, 38.55 38d in 83 aa, and to Clostridium acetobutylicum flagellar biosynthesis related protein cac0639 SWALL:Q97LC3 (EMBL:AE007579) (90 aa) fasta scores: E(): 2.2e-17, 65 38d in 80 aa; hypothetical protein 217800..218069 Clostridium botulinum A str. ATCC 3502 5184435 YP_001252725.1 CDS CBO0181 NC_009495.1 218083 218769 D Similar to Clostridium perfringens hypothetical protein Cpe0653 cpe0653 SWALL:Q8XMN5 (EMBL:AP003187) (230 aa) fasta scores: E(): 3.1e-64, 67.54 38d in 228 aa; Ser/Thr protein phosphatase 218083..218769 Clostridium botulinum A str. ATCC 3502 5184436 YP_001252726.1 CDS CBO0182 NC_009495.1 218853 219134 D Similar to Bacillus anthracis transcriptional repressor PagR or TcrA or Pxo1-109 SWALL:PAGR_BACAN (SWALL:O31178) (99 aa) fasta scores: E(): 8e-09, 41.37 38d in 87 aa, and to Bacillus cereus transcriptional regulator, ArsR family bc4256 SWALL:Q818J4 (EMBL:AE017011) (96 aa) fasta scores: E(): 4.6e-16, 63.09 38d in 84 aa; transcription regulator ArsR 218853..219134 Clostridium botulinum A str. ATCC 3502 5184437 YP_001252727.1 CDS CBO0183 NC_009495.1 219174 221627 D Similar to Fusobacterium nucleatum coenzyme a disulfide reductase/ disulfide bond regulator domain fn1903 SWALL:Q8RHU1 (EMBL:AE010492) (810 aa) fasta scores: E(): 1e-163, 56.35 38d in 818 aa, and to Fusobacterium nucleatum subsp. vincentii ATCC 49256 coenzyme a disulfide reductase/ disulfide bond regulator domain fnv2089 SWALL:Q7P7P1 (EMBL:AABF01000012) (809 aa) fasta scores: E(): 2.7e-159, 55.5 38d in 818 aa; pyridine nucleotide-disulfide oxidoreductase 219174..221627 Clostridium botulinum A str. ATCC 3502 5184438 YP_001252728.1 CDS CBO0184 NC_009495.1 221655 222509 R Similar to Clostridium acetobutylicum uncharacterized protein cac0641 SWALL:Q97LC1 (EMBL:AE007579) (264 aa) fasta scores: E(): 2.5e-49,52.98 38d in 251 aa; hypothetical protein complement(221655..222509) Clostridium botulinum A str. ATCC 3502 5184439 YP_001252729.1 CDS CBO0185 NC_009495.1 222666 223454 D Similar to Clostridium tetani GTP pyrophosphokinase ctc00336 SWALL:Q898V3 (EMBL:AE015937) (262 aa) fasta scores: E(): 8.5e-70, 77.86 38d in 262 aa; RelA/SpoT domain-containing protein 222666..223454 Clostridium botulinum A str. ATCC 3502 5188006 YP_001252730.1 CDS leuS NC_009495.1 223757 226198 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(223757..226198) Clostridium botulinum A str. ATCC 3502 5187707 YP_001252731.1 CDS CBO0187 NC_009495.1 226575 226979 R Similar to Nitrosomonas europaea transmembrane protein ne2212 SWALL:Q82SU2 (EMBL:BX321863) (140 aa) fasta scores: E(): 4.3e-05, 25.83 38d in 120 aa,and to Pseudomonas aeruginosa hypothetical protein Pa5130 pa5130 SWALL:Q9HU54 (EMBL:AE004926) (139 aa) fasta scores: E(): 7.6e-05, 29.16 38d in 120 aa; hypothetical protein complement(226575..226979) Clostridium botulinum A str. ATCC 3502 5184442 YP_001252732.1 CDS CBO0188 NC_009495.1 227293 227817 R Similar to Staphylococcus epidermidis cell shape determinant MreD se1331 SWALL:Q8CNZ6 (EMBL:AE016748) (173 aa) fasta scores: E(): 0.34, 22.36 38d in 161 aa, and to Clostridium tetani heptaprenyl diphosphate synthase component I ctc01025 SWALL:Q896H9 (EMBL:AE015939) (181 aa) fasta scores: E(): 0.13, 25.97 38d in 154 aa; hypothetical protein complement(227293..227817) Clostridium botulinum A str. ATCC 3502 5184443 YP_001252733.1 CDS CBO0189 NC_009495.1 227842 228441 R Similar to Clostridium acetobutylicum molecular chaperone, DNAJ family cac0648 SWALL:Q97LB4 (EMBL:AE007580) (195 aa) fasta scores: E(): 1.6e-36,55.15 38d in 194 aa; DnaJ family molecular chaperone complement(227842..228441) Clostridium botulinum A str. ATCC 3502 5184444 YP_001252734.1 CDS CBO0190 NC_009495.1 228428 229303 R Similar to Clostridium acetobutylicum uncharacterized protein, homolog of thermotoga maritima cac0649 SWALL:Q97LB3 (EMBL:AE007580) (283 aa) fasta scores: E(): 6.7e-52, 52.51 38d in 278 aa, and to Thermotoga maritima hypothetical protein Tm1805 tm1805 SWALL:Q9X2C5 (EMBL:AE001818) (272 aa) fasta scores: E(): 1.4e-10, 35.03 38d in 294 aa; hypothetical protein complement(228428..229303) Clostridium botulinum A str. ATCC 3502 5184445 YP_001252735.1 CDS CBO0191 NC_009495.1 229307 229846 R Similar to Clostridium acetobutylicum adenilate cyclase, class2 cac0650 SWALL:Q97LB2 (EMBL:AE007580) (180 aa) fasta scores: E(): 8.5e-37, 64.77 38d in 176 aa, and to Clostridium perfringens hypothetical protein Cpe1352 cpe1352 SWALL:Q8XKP2 (EMBL:AP003190) (187 aa) fasta scores: E(): 6.5e-36, 62.92 38d in 178 aa; adenylyl cyclase complement(229307..229846) Clostridium botulinum A str. ATCC 3502 5184446 YP_001252736.1 CDS CBO0192 NC_009495.1 230135 231172 D Similar to Clostridium tetani protein ctc00340 SWALL:Q898U9 (EMBL:AE015937) (366 aa) fasta scores: E(): 2e-83, 66.37 38d in 345 aa, and to Clostridium acetobutylicum hypothetical protein Cac0651 cac0651 SWALL:Q97LB1 (EMBL:AE007580) (345 aa) fasta scores: E(): 3.2e-82, 62.31 38d in 345 aa; hypothetical protein 230135..231172 Clostridium botulinum A str. ATCC 3502 5184447 YP_001252737.1 CDS CBO0193 NC_009495.1 231446 232372 R Similar to Entamoeba histolytica fructose-1,6-bisphosphate aldolase Ald SWALL:Q8MTW2 (EMBL:AY057996) (326 aa) fasta scores: E(): 5.8e-51, 49.2 id in 315 aa, and to Clostridium tetani fructose-bisphosphate aldolase ctc00341 SWALL:Q898U8 (EMBL:AE015937) (320 aa) fasta scores: E(): 3.3e-80,76.75 38d in 314 aa; fructose-1,6-bisphosphate aldolase complement(231446..232372) Clostridium botulinum A str. ATCC 3502 5184448 YP_001252738.1 CDS CBO0194 NC_009495.1 232598 232882 R Similar to Clostridium perfringens hypothetical protein Cpe1349 SWALL:Q8XKP5 (EMBL:AP003190) (144 aa) fasta scores: E(): 8e-10, 37.77 38d in 90 aa, and to Clostridium acetobutylicum hypothetical protein Cac0670 SWALL:Q97L92 (EMBL:AE007582) (126 aa) fasta scores: E(): 2.1e-07, 31.57 38d in 95 aa; hypothetical protein complement(232598..232882) Clostridium botulinum A str. ATCC 3502 5184449 YP_001252739.1 CDS CBO0195 NC_009495.1 232999 233667 R Similar to Clostridium tetani protein ctc00342 SWALL:Q898U7 (EMBL:AE015937) (225 aa) fasta scores: E(): 3.4e-51, 63.06 38d in 222 aa, and to Clostridium acetobutylicum ortholog yrbg, yete, ykja,ydfs, ydfr b.subtilis cac0671 SWALL:Q97L91 (EMBL:AE007582) (224 aa) fasta scores: E(): 1e-47, 58.82 38d in 221 aa; hypothetical protein complement(232999..233667) Clostridium botulinum A str. ATCC 3502 5184450 YP_001252740.1 CDS CBO0196 NC_009495.1 233792 235450 D Similar to Clostridium tetani uridine kinase ctc00344 SWALL:Q898U6 (EMBL:AE015937) (552 aa) fasta scores: E(): 6.7e-122, 61.05 38d in 552 aa, and to Clostridium acetobutylicum fision threonyl-trna synthetase cac0672 SWALL:Q97L90 (EMBL:AE007582) (553 aa) fasta scores: E(): 4.3e-123, 61.84 38d in 553 aa; threonyl-tRNA synthetase/uridine kinase 233792..235450 Clostridium botulinum A str. ATCC 3502 5184451 YP_001252741.1 CDS CBO0197 NC_009495.1 235588 235719 D hypothetical protein 235588..235719 Clostridium botulinum A str. ATCC 3502 5184452 YP_001252742.1 CDS CBO0198 NC_009495.1 235820 236341 R Similar to Bacillus subtilis CDP-diacylglycerol--serine O-phosphatidyltransferase PssA or Pss or bsu02270 SWALL:PSS_BACSU (SWALL:P39823) (177 aa) fasta scores: E(): 5.7e-17, 39.15 38d in 166 aa, and to Clostridium tetani CDP-diacylglycerol--serine O-phosphatidyltransferase ctc00346 SWALL:Q898U4 (EMBL:AE015937) (175 aa) fasta scores: E(): 3.4e-45,70.17 38d in 171 aa; CDP-diacylglycerol--serine O-phosphatidyltransferase complement(235820..236341) Clostridium botulinum A str. ATCC 3502 5184453 YP_001252743.1 CDS CBO0199 NC_009495.1 236528 236944 D Similar to Clostridium acetobutylicum CBS domains cac0678 SWALL:Q97L84 (EMBL:AE007583) (142 aa) fasta scores: E(): 4e-24, 54.81 38d in 135 aa, and to Clostridium tetani inosine-5-monophosphate dehydrogenase related protein ctc00347 SWALL:Q898U3 (EMBL:AE015937) (143 aa) fasta scores: E(): 4.3e-25, 57.97 38d in 138 aa; hypothetical protein 236528..236944 Clostridium botulinum A str. ATCC 3502 5184454 YP_001252744.1 CDS CBO0200 NC_009495.1 237050 237934 D similar to YegS from E. coli; lipid kinase 237050..237934 Clostridium botulinum A str. ATCC 3502 5187161 YP_001252745.1 CDS CBO0201 NC_009495.1 238008 238652 D Similar to Clostridium acetobutylicum predicted membrane protein cac0680 SWALL:Q97L82 (EMBL:AE007583) (216 aa) fasta scores: E(): 2.9e-10, 27.06 38d in 218 aa; hypothetical protein 238008..238652 Clostridium botulinum A str. ATCC 3502 5184456 YP_001252746.1 CDS CBO0202 NC_009495.1 238744 240681 R Similar to Clostridium perfringens hypothetical protein Cpe1196 cpe1196 SWALL:Q8XL46 (EMBL:AP003189) (662 aa) fasta scores: E(): 5.7e-150, 59.93 38d in 644 aa, and to Thermotoga maritima hypothetical protein Tm0337 tm0337 SWALL:Q9WYH2 (EMBL:AE001714) (558 aa) fasta scores: E(): 1.4e-99, 48.82 38d in 553 aa; hypothetical protein complement(238744..240681) Clostridium botulinum A str. ATCC 3502 5187168 YP_001252747.1 CDS CBO0203 NC_009495.1 241276 242541 D Similar to Clostridium perfringens hypothetical protein Cpe1323 SWALL:Q8XKS1 (EMBL:AP003190) (423 aa) fasta scores: E(): 3.9e-69, 50.47 38d in 418 aa; PRC-barrel domain/MgtE domain/CBS domain-containing protein 241276..242541 Clostridium botulinum A str. ATCC 3502 5184458 YP_001252748.1 CDS sleB NC_009495.1 242771 243466 D Similar to Bacillus cereus spore cortex-lytic enzyme precursor SleB or bc2753 SWALL:SLEB_BACCR (SWALL:P70874) (259 aa) fasta scores: E(): 1.6e-25, 42.85 id in 259 aa, and to Clostridium tetani spore-cortex-lytic enzyme precursor ctc00350 SWALL:Q898U1 (EMBL:AE015937) (255 aa) fasta scores: E(): 5e-62, 65.93 38d in 229 aa; spore-cortex-lytic enzyme 242771..243466 Clostridium botulinum A str. ATCC 3502 5184459 YP_001252749.1 CDS cysK1 NC_009495.1 243830 244744 D Also similar to CBO0205 (53.5 38d).; cysteine synthase A 243830..244744 Clostridium botulinum A str. ATCC 3502 5184460 YP_001252750.1 CDS cysA NC_009495.1 244759 245355 D Similar to Bacillus subtilis serine acetyltransferase CysE or CusA or bsu00930 SWALL:CYSE_BACSU (SWALL:Q06750) (217 aa) fasta scores: E(): 4.3e-35, 61.07 38d in 167 aa, and to Clostridium tetani serine acetyltransferase ctc00351 SWALL:Q898U0 (EMBL:AE015937) (186 aa) fasta scores: E(): 2.6e-47,74.45 38d in 184 aa; serine O-acetyltransferase 244759..245355 Clostridium botulinum A str. ATCC 3502 5184461 YP_001252751.1 CDS CBO0207 NC_009495.1 245377 246342 D Similar to Clostridium tetani iron-sulfur cluster-binding protein ctc00352 SWALL:Q898T9 (EMBL:AE015937) (327 aa) fasta scores: E(): 2.3e-75,61.12 38d in 319 aa; (Fe-S)-binding protein 245377..246342 Clostridium botulinum A str. ATCC 3502 5184462 YP_001252752.1 CDS plsD NC_009495.1 246490 247191 D Similar to Clostridium butyricum sn-glycerol-3-phosphate acyltransferase plsD SWALL:O32330 (EMBL:AF009362) (234 aa) fasta scores: E(): 9e-45, 56.65 id in 233 aa; 1-acyl-sn-glycerol-3-phosphate acyltransferase 246490..247191 Clostridium botulinum A str. ATCC 3502 5187369 YP_001252753.1 CDS nth NC_009495.1 247284 247925 D Similar to Paenibacillus polymyxa End3 ntH SWALL:Q9LCR1 (EMBL:AB003153) (224 aa) fasta scores: E(): 2e-35, 46.26 38d in 214 aa, and to Clostridium perfringens endonuclease III cpe1318 SWALL:Q8XKS6 (EMBL:AP003190) (209 aa) fasta scores: E(): 2.2e-47, 63.5 38d in 200 aa; endonuclease III 247284..247925 Clostridium botulinum A str. ATCC 3502 5184464 YP_001252754.1 CDS CBO0210 NC_009495.1 248077 249249 D Similar to Bacillus stearothermophilus NAD-dependent malic enzyme SWALL:MAOX_BACST (SWALL:P16468) (478 aa) fasta scores: E(): 7e-79, 59.38 38d in 389 aa,and to Clostridium tetani NAD-dependent malic enzyme ctc00356 SWALL:Q898T6 (EMBL:AE015937) (389 aa) fasta scores: E(): 6.1e-102, 73.52 38d in 389 aa; Also similar to CBO0246 (66.6 38d); malic enzyme 248077..249249 Clostridium botulinum A str. ATCC 3502 5187173 YP_001252755.1 CDS CBO0211 NC_009495.1 249276 250505 R Similar to Bacillus subtilis cina-like protein CinA or bsu16930 SWALL:CINA_BACSU (SWALL:P46323) (416 aa) fasta scores: E(): 6.2e-57, 44.92 38d in 394 aa, and to Clostridium acetobutylicum competence-damage inducible protein, cina cac3586 SWALL:Q97D94 (EMBL:AE007855) (411 aa) fasta scores: E(): 1.3e-92, 60.29 38d in 408 aa; competence damage-inducible protein A complement(249276..250505) Clostridium botulinum A str. ATCC 3502 5184466 YP_001252756.1 CDS CBO0212 NC_009495.1 250531 251514 R Similar to Clostridium acetobutylicum predicted hydrolase from alpha/beta family, yqkd b.subtilis ortholog cac2725 SWALL:Q97FL1 (EMBL:AE007770) (330 aa) fasta scores: E(): 1.2e-61, 50.31 38d in 318 aa; hypothetical protein complement(250531..251514) Clostridium botulinum A str. ATCC 3502 5184467 YP_001252757.1 CDS CBO0213 NC_009495.1 251624 252658 R Similar to Lactococcus lactis glutamyl-aminopeptidase PepA SWALL:PEPA_LACLC (SWALL:Q48677) (355 aa) fasta scores: E(): 4.4e-08, 23.21 id in 336 aa, and to Clostridium acetobutylicum endoglucanase, aminopeptidase m42 family cac0690 SWALL:Q97L72 (EMBL:AE007584) (343 aa) fasta scores: E(): 2.2e-89, 65.78 38d in 342 aa; glutamyl aminopeptidase complement(251624..252658) Clostridium botulinum A str. ATCC 3502 5184468 YP_001252758.1 CDS CBO0214 NC_009495.1 252810 253946 D Similar to Clostridium acetobutylicum uncharacterized protein, vanw of enterococcus faecalis related cac0691 SWALL:Q97L71 (EMBL:AE007584) (411 aa) fasta scores: E(): 4e-53, 44.75 38d in 362 aa, and to Clostridium tetani vancomycin b-type resistance protein vanw vanw or ctc00360 SWALL:Q898T2 (EMBL:AE015937) (467 aa) fasta scores: E(): 3.3e-61, 49.33 38d in 377 aa; Also similar to the downstream CDS, CBO0215 (48 id) and CBO0820 (45 38d); vanW-like family protein 252810..253946 Clostridium botulinum A str. ATCC 3502 5184469 YP_001252759.1 CDS CBO0215 NC_009495.1 254151 255503 D Similar to Clostridium acetobutylicum uncharacterized protein, vanw of enterococcus faecalis related cac0691 SWALL:Q97L71 (EMBL:AE007584) (411 aa) fasta scores: E(): 3.4e-55, 42.72 38d in 433 aa, and to Clostridium tetani vancomycin b-type resistance protein vanw vanw or ctc00360 SWALL:Q898T2 (EMBL:AE015937) (467 aa) fasta scores: E(): 7.3e-69, 45.59 38d in 454 aa; Also similar to the upstream CDS, CBO0214 (48 38d) and CBO0820 (47 38d); exported protein 254151..255503 Clostridium botulinum A str. ATCC 3502 5184470 YP_001252760.1 CDS spl NC_009495.1 255650 256657 D Similar to Bacillus subtilis spore photoproduct lyase SplB or Spl or bsu13930 SWALL:SPL_BACSU (SWALL:P37956) (342 aa) fasta scores: E(): 1.4e-52, 45.23 id in 336 aa, and to Clostridium acetobutylicum spore photoproduct lyase, SplB cac0699 SWALL:Q97L63 (EMBL:AE007585) (336 aa) fasta scores: E(): 4.5e-71,54.92 38d in 335 aa; spore photoproduct lyase 255650..256657 Clostridium botulinum A str. ATCC 3502 5184471 YP_001252761.1 CDS CBO0217 NC_009495.1 256785 257252 D Similar to Bacillus subtilis CspR SWALL:Q45512 (EMBL:U58864) (157 aa) fasta scores: E(): 2.6e-31, 53.79 id in 158 aa, and to Clostridium acetobutylicum predicted tRNA-methylase cac0700 SWALL:Q97L62 (EMBL:AE007585) (160 aa) fasta scores: E(): 5.7e-53, 83.11 38d in 154 aa; hypothetical protein 256785..257252 Clostridium botulinum A str. ATCC 3502 5184472 YP_001252762.1 CDS CBO0218 NC_009495.1 257265 258104 D Similar to Clostridium tetani degv protein degv or ctc00368 SWALL:Q898S4 (EMBL:AE015937) (280 aa) fasta scores: E(): 1.1e-66, 65.71 38d in 280 aa, and to Clostridium acetobutylicum hypothetical upf0230 protein Cac0701 SWALL:Y701_CLOAB (SWALL:Q97L61) (279 aa) fasta scores: E(): 5.9e-59, 60.21 38d in 279 aa; DegV family protein 257265..258104 Clostridium botulinum A str. ATCC 3502 5184473 YP_001252763.1 CDS CBO0219 NC_009495.1 258398 259501 D Similar to Listeria monocytogenes cd4+ T cell-stimulating antigen precursor tcsa or lmo1388 SWALL:TCSA_LISMO (SWALL:Q48754) (357 aa) fasta scores: E(): 1.4e-30, 41.09 38d in 365 aa, and to Clostridium tetani membrane lipoprotein TmpC precursor TmpC or ctc00369 SWALL:Q898S3 (EMBL:AE015937) (359 aa) fasta scores: E(): 2e-65, 56.09 38d in 369 aa; lipoprotein, bmp family 258398..259501 Clostridium botulinum A str. ATCC 3502 5184474 YP_001252764.1 CDS CBO0220 NC_009495.1 259685 261217 D Similar to Clostridium acetobutylicum sugar ABC-transporter ATP-ase component cac0703 SWALL:Q97L59 (EMBL:AE007585) (514 aa) fasta scores: E(): 1.5e-128,75.78 38d in 508 aa; sugar ABC transporter ATP-binding protein 259685..261217 Clostridium botulinum A str. ATCC 3502 5184475 YP_001252765.1 CDS CBO0221 NC_009495.1 261219 262322 D Similar to Clostridium acetobutylicum sugar ABC transporter permease cac0704 SWALL:Q97L58 (EMBL:AE007585) (365 aa) fasta scores: E(): 1.9e-88,64.94 38d in 368 aa; sugar ABC transporter permease 261219..262322 Clostridium botulinum A str. ATCC 3502 5184476 YP_001252766.1 CDS CBO0222 NC_009495.1 262315 263241 D Similar to Clostridium acetobutylicum sugar ABC transporter permease cac0705 SWALL:Q97L57 (EMBL:AE007585) (310 aa) fasta scores: E(): 5.9e-82,70.64 38d in 310 aa; sugar ABC transporter permease 262315..263241 Clostridium botulinum A str. ATCC 3502 5184477 YP_001252767.1 CDS CBO0223 NC_009495.1 263353 264078 D Similar to Bacillus subtilis probable polysaccharide deacetylase PdaA precursor PdaA or bsu07980 SWALL:PDAA_BACSU (SWALL:O34928) (263 aa) fasta scores: E(): 1.1e-13, 34.95 38d in 206 aa, and to Clostridium perfringens probable endo-1,4-beta-xylanase cpe1477 SWALL:Q8XKC3 (EMBL:AP003190) (238 aa) fasta scores: E(): 8.6e-33, 44.58 38d in 240 aa; polysaccharide deacetylase 263353..264078 Clostridium botulinum A str. ATCC 3502 5187270 YP_001252768.1 CDS hno NC_009495.1 264407 265780 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 264407..265780 Clostridium botulinum A str. ATCC 3502 5184479 YP_001252769.1 CDS cggR NC_009495.1 266068 267099 D Similar to Bacillus megaterium central glycolytic genes regulator CggR SWALL:CGGR_BACME (SWALL:P35168) (342 aa) fasta scores: E(): 8.9e-45, 43.49 38d in 338 aa, and to Thermoanaerobacter tengcongensis transcriptional regulator, contains sigma factor-related N-terminal domain DeoR2 or tte1763 SWALL:Q8R963 (EMBL:AE013129) (340 aa) fasta scores: E(): 1e-59, 55.58 38d in 340 aa; central glycolytic genes regulator 266068..267099 Clostridium botulinum A str. ATCC 3502 5188010 YP_001252770.1 CDS gap1 NC_009495.1 267177 268184 D Similar to Bacillus megaterium glyceraldehyde 3-phosphate dehydrogenase Gap SWALL:G3P_BACME (SWALL:P23722) (334 aa) fasta scores: E(): 4.3e-78, 64.86 id in 333 aa, and to Bacillus stearothermophilus glyceraldehyde 3-phosphate dehydrogenase Gap SWALL:G3P_BACST (SWALL:P00362) (334 aa) fasta scores: E(): 4.1e-82, 69.06 38d in 333 aa; Also similar to CBO1095 (66.26 38d); glyceraldehyde-3-phosphate dehydrogenase, type I 267177..268184 Clostridium botulinum A str. ATCC 3502 5184481 YP_001252771.1 CDS pgk NC_009495.1 268482 269678 D Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 268482..269678 Clostridium botulinum A str. ATCC 3502 5187988 YP_001252772.1 CDS tpiA NC_009495.1 269740 270486 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 269740..270486 Clostridium botulinum A str. ATCC 3502 5184483 YP_001252773.1 CDS gpmI NC_009495.1 270578 272107 D catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 270578..272107 Clostridium botulinum A str. ATCC 3502 5184484 YP_001252774.1 CDS eno NC_009495.1 272163 273458 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 272163..273458 Clostridium botulinum A str. ATCC 3502 5184485 YP_001252775.1 CDS secG NC_009495.1 273681 273914 D Similar to Bacillus subtilis probable protein-export membrane protein SecG or bsu33630 SWALL:SECG_BACSU (SWALL:O32233) (76 aa) fasta scores: E(): 9.3e-10, 49.29 38d in 71 aa, and to Clostridium perfringens probable protein-export membrane protein SecG or cpe1297 SWALL:Q8XKU5 (EMBL:AP003190) (76 aa) fasta scores: E(): 4.7e-10, 44 38d in 75 aa; preprotein translocase, SecG subunit 273681..273914 Clostridium botulinum A str. ATCC 3502 5184486 YP_001252776.1 CDS rnr NC_009495.1 274123 276300 D Similar to Bacillus subtilis ribonuclease R Rnr or VacB or bsu33610 SWALL:RNR_BACSU (SWALL:O32231) (779 aa) fasta scores: E(): 1e-143, 54.55 38d in 702 aa, and to Clostridium acetobutylicum fusion ribonuclease and ribosomal protein S1 domain cac0715 SWALL:Q97L50 (EMBL:AE007586) (730 aa) fasta scores: E(): 2e-197, 72.08 id in 720 aa; ribonuclease R 274123..276300 Clostridium botulinum A str. ATCC 3502 5184487 YP_001252777.1 CDS surE NC_009495.1 276709 277467 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 276709..277467 Clostridium botulinum A str. ATCC 3502 5184488 YP_001252778.1 CDS smpB NC_009495.1 277724 278194 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 277724..278194 Clostridium botulinum A str. ATCC 3502 5184489 YP_001252779.1 CDS CBO0235 NC_009495.1 278333 279496 R Similar to Clostridium perfringens probable glutamate/ aspartate transporter cpe0967 SWALL:Q8XLS4 (EMBL:AP003188) (387 aa) fasta scores: E(): 3.2e-120,84.23 38d in 387 aa; sodium:dicarboxylate symporter family protein complement(278333..279496) Clostridium botulinum A str. ATCC 3502 5184490 YP_001252780.1 CDS CBO0237 NC_009495.1 281431 282762 D Similar to Streptomyces sp. JP95 fad-binding oxidoreductase Grho1 grho1 SWALL:Q8KSY2 (EMBL:AF509565) (467 aa) fasta scores: E(): 2.5e-25,30.81 38d in 464 aa, and to Bacillus cereus FAD-dependent oxidase bc0412 SWALL:Q81IH6 (EMBL:AE016999) (444 aa) fasta scores: E(): 5.9e-95, 52.16 38d in 439 aa; FAD-binding protein 281431..282762 Clostridium botulinum A str. ATCC 3502 5184492 YP_001252781.1 CDS CBO0238 NC_009495.1 282837 283226 R hypothetical protein complement(282837..283226) Clostridium botulinum A str. ATCC 3502 5184493 YP_001252782.1 CDS CBO0239 NC_009495.1 283372 283599 D hypothetical protein 283372..283599 Clostridium botulinum A str. ATCC 3502 5184494 YP_001252783.1 CDS CBO0240 NC_009495.1 283613 283762 R hypothetical protein complement(283613..283762) Clostridium botulinum A str. ATCC 3502 5184495 YP_001252784.1 CDS CBO0241 NC_009495.1 284737 286161 D Similar to Catharanthus roseus aromatic-L-amino-acid decarboxylase tdC SWALL:DDC_CATRO (SWALL:P17770) (500 aa) fasta scores: E(): 9.8e-22, 22.05 id in 458 aa; amino acid decarboxylase 284737..286161 Clostridium botulinum A str. ATCC 3502 5184496 YP_001252785.1 CDS CBO0242 NC_009495.1 286349 287200 D Similar to Bacillus halodurans flagellin Hag or bh3616 SWALL:FLA_BACHD (SWALL:Q05203) (272 aa) fasta scores: E(): 1e-39, 49.82 38d in 279 aa, and to Clostridium acetobutylicum flagellin FlaC or cac2203 SWALL:O69136 (EMBL:AF064086) (275 aa) fasta scores: E(): 3e-41, 50.17 38d in 279 aa; flagellin protein 286349..287200 Clostridium botulinum A str. ATCC 3502 5184497 YP_001252786.1 CDS CBO0243 NC_009495.1 287559 289178 D Similar to Ascophyllum nodosum vanadium haloperoxidase SWALL:PRXV_ASCNO (SWALL:P81701) (557 aa) fasta scores: E(): 5.9e-25, 34.79 38d in 523 aa, and to Laminaria digitata vanadium-dependent bromoperoxidase 2 VbpO2 SWALL:CAD37192 (EMBL:AJ491787) (682 aa) fasta scores: E(): 6.3e-37, 36.1 38d in 518 aa; vanadium-dependent haloperoxidase 287559..289178 Clostridium botulinum A str. ATCC 3502 5184498 YP_001252787.1 CDS CBO0244 NC_009495.1 289562 290221 D Similar to Bacillus subtilis hypothetical protein yrkc or bsu26560 SWALL:YRKC_BACSU (SWALL:P54430) (186 aa) fasta scores: E(): 5.7e-41, 61.45 38d in 192 aa, and to Clostridium tetani protein ctc01899 SWALL:Q893C8 (EMBL:AE015942) (193 aa) fasta scores: E(): 1.1e-40,59.09 38d in 220 aa; hypothetical protein 289562..290221 Clostridium botulinum A str. ATCC 3502 5184499 YP_001252788.1 CDS CBO0245 NC_009495.1 290562 291671 D Similar to Clostridium acetobutylicum predicted membrane protein cac0739 SWALL:Q97L27 (EMBL:AE007589) (368 aa) fasta scores: E(): 1.8e-33, 41.42 38d in 379 aa; hypothetical protein 290562..291671 Clostridium botulinum A str. ATCC 3502 5184500 YP_001252789.1 CDS CBO0246 NC_009495.1 292173 293345 D Similar to Corynebacterium melassecola malic enzyme MalE SWALL:Q9KIF8 (EMBL:AF234535) (392 aa) fasta scores: E(): 3.3e-63, 52.91 38d in 378 aa, and to Escherichia coli NADP-dependent malic enzyme MaeB or b2463 SWALL:MAO2_ECOLI (SWALL:P76558) (759 aa) fasta scores: E(): 2.7e-57, 48.88 id in 403 aa; Also similar to CBO0210 (66.6 38d); malic enzyme 292173..293345 Clostridium botulinum A str. ATCC 3502 5184501 YP_001252790.1 CDS kdgT NC_009495.1 293557 294531 D transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease 293557..294531 Clostridium botulinum A str. ATCC 3502 5184502 YP_001252791.1 CDS CBO0248 NC_009495.1 294745 296367 D Similar to Escherichia coli, and Escherichia coli O157:H7 sensor protein DcuS or b4125 or z5727 or ecs5107 SWALL:DCUS_ECOLI (SWALL:P39272) (543 aa) fasta scores: E(): 1.4e-44, 31.09 38d in 537 aa, and to Clostridium tetani sensor kinase DpiB or ctc01524 SWALL:Q894L7 (EMBL:AE015941) (538 aa) fasta scores: E(): 4.2e-67,41.17 38d in 544 aa; sensor histidine kinase 294745..296367 Clostridium botulinum A str. ATCC 3502 5184503 YP_001252792.1 CDS CBO0249 NC_009495.1 296345 297019 D Similar to Bacillus subtilis probable c4-dicarboxylate response regulator dctr dctr or bsu04460 SWALL:DCTR_BACSU (SWALL:P96602) (226 aa) fasta scores: E(): 1e-26, 40 38d in 220 aa; response regulator 296345..297019 Clostridium botulinum A str. ATCC 3502 5184504 YP_001252793.1 CDS CBO0250 NC_009495.1 297576 299039 D Similar to Bacillus subtilis amino-acid permease RocE or bsu40330 SWALL:ROCE_BACSU (SWALL:P39137) (467 aa) fasta scores: E(): 1.8e-73, 41.99 38d in 462 aa, and to Clostridium perfringens lysine specific permease cpe1166 SWALL:Q8XL76 (EMBL:AP003189) (489 aa) fasta scores: E(): 9.5e-137, 69.37 38d in 480 aa; lysine-specific permease 297576..299039 Clostridium botulinum A str. ATCC 3502 5184505 YP_001252794.1 CDS CBO0251 NC_009495.1 299583 300317 D Similar to Serratia fonticola beta-lactamase SfhI SWALL:Q9RMI1 (EMBL:AF197943) (234 aa) fasta scores: E(): 0.086, 25.4 38d in 248 aa, and to Aeromonas veronii metallo-B-lactamase ImiS SWALL:O31272 (EMBL:Y10415) (255 aa) fasta scores: E(): 0.45, 22.26 38d in 247 aa; metallo-beta-lactamase superfamily protein 299583..300317 Clostridium botulinum A str. ATCC 3502 5184506 YP_001252795.1 CDS CBO0252 NC_009495.1 300431 300943 D Similar to Clostridium acetobutylicum predicted acetyltransferase cac2751 SWALL:Q97FI6 (EMBL:AE007773) (167 aa) fasta scores: E(): 8.9e-07, 25.44 38d in 169 aa; GNAT family acetyltransferase 300431..300943 Clostridium botulinum A str. ATCC 3502 5186991 YP_001252796.1 CDS CBO0253 NC_009495.1 300969 301346 D Similar to Bacillus caldolyticus cytidine deaminase Cdd SWALL:Q9R2S1 (EMBL:AJ237979) (132 aa) fasta scores: E(): 1.2e-05, 30.4 38d in 125 aa, and to Aspergillus terreus blasticidin-S deaminase Bsd SWALL:BSD_ASPTE (SWALL:P78986) (130 aa) fasta scores: E(): 3.9e-05, 31.49 id in 127 aa; cytidine/deoxycytidylate deaminase 300969..301346 Clostridium botulinum A str. ATCC 3502 5184508 YP_001252797.1 CDS CBO0254 NC_009495.1 301505 302407 D Similar to Listeria innocua hypothetical protein Lin2361 SWALL:Q929B6 (EMBL:AL596172) (291 aa) fasta scores: E(): 3.5e-39, 37.75 38d in 294 aa, and to Bacillus halodurans hypothetical protein Bh3929 bh3929 SWALL:Q9K606 (EMBL:AP001520) (286 aa) fasta scores: E(): 1.7e-23,30.47 38d in 292 aa; GNAT family acetyltransferase 301505..302407 Clostridium botulinum A str. ATCC 3502 5184509 YP_001252798.1 CDS CBO0255 NC_009495.1 302433 302957 D Similar to Thermotoga maritima dihydrofolate reductase FolA or DyrA or tm1641 SWALL:DYR_THEMA (SWALL:Q60034) (169 aa) fasta scores: E(): 0.00064, 24.56 id in 171 aa, and to Bacillus cereus pyrimidine reductase bc0650 SWALL:Q813Y8 (EMBL:AE017000) (173 aa) fasta scores: E(): 1.8e-16, 37.19 38d in 164 aa; RibD domain-containing protein 302433..302957 Clostridium botulinum A str. ATCC 3502 5184510 YP_001252799.1 CDS CBO0256 NC_009495.1 303020 303949 D 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 303020..303949 Clostridium botulinum A str. ATCC 3502 5184511 YP_001252800.1 CDS CBO0257 NC_009495.1 304450 305124 R Similar to Thermus thermophilus orf protein SWALL:Q9RA48 (EMBL:AB029373) (196 aa) fasta scores: E(): 0.00015, 34.54 38d in 165 aa, and to Clostridium acetobutylicum amidase related to nicotinamidase cac0779 SWALL:Q97KY7 (EMBL:AE007593) (211 aa) fasta scores: E(): 1.6e-42, 59.36 38d in 219 aa; isochorismate family protein complement(304450..305124) Clostridium botulinum A str. ATCC 3502 5184512 YP_001252801.1 CDS xdhA1 NC_009495.1 305551 307881 D Similar to Escherichia coli xanthine dehydrogenase,molybdenum binding subunit XdhA or b2866 SWALL:XDHA_ECOLI (SWALL:Q46799) (752 aa) fasta scores: E(): 6e-37, 29.35 id in 780 aa, and to Bacillus halodurans hypothetical protein Bh1977 SWALL:Q9KBF1 (EMBL:AP001513) (1054 aa) fasta scores: E(): 1.7e-176, 59.58 38d in 767 aa; xanthine dehydrogenase, molybdenum binding subunit 305551..307881 Clostridium botulinum A str. ATCC 3502 5184513 YP_001252802.1 CDS xdhB2 NC_009495.1 307881 308720 D Similar to Escherichia coli xanthine dehydrogenase,FAD binding subunit XdhB or b2867 SWALL:XDHB_ECOLI (SWALL:Q46800) (292 aa) fasta scores: E(): 0.00013, 22.06 id in 281 aa, and to Bacillus cereus xanthine dehydrogenase fad-binding subunit bc3167 SWALL:Q81BJ0 (EMBL:AE017008) (279 aa) fasta scores: E(): 6.2e-54,52.89 38d in 276 aa; xanthine dehydrogenase, FAD binding subunit 307881..308720 Clostridium botulinum A str. ATCC 3502 5184514 YP_001252803.1 CDS xdhC1 NC_009495.1 308717 309190 D Similar to Escherichia coli xanthine dehydrogenase iron-sulfur binding subunit xdhc or b2868 SWALL:XDHC_ECOLI (SWALL:Q46801) (159 aa) fasta scores: E(): 1.2e-15, 39.61 id in 154 aa, and to Clostridium tetani carbon monoxide dehydrogenase, small subunit ctc02474 SWALL:Q891A6 (EMBL:AE015944) (158 aa) fasta scores: E(): 4.4e-39, 62.5 id in 152 aa; xanthine dehydrogenase iron-sulfur binding subunit 308717..309190 Clostridium botulinum A str. ATCC 3502 5184515 YP_001252804.1 CDS CBO0261 NC_009495.1 309547 310017 D Similar to Clostridium perfringens hypothetical protein Cpe1837 SWALL:Q8XJC3 (EMBL:AP003192) (146 aa) fasta scores: E(): 1.4, 29.66 38d in 118 aa; hypothetical protein 309547..310017 Clostridium botulinum A str. ATCC 3502 5184516 YP_001252805.1 CDS ccdA1 NC_009495.1 310028 310711 D Similar to Paracoccus pantotrophus cytochrome C biogenesis protein CcdA SWALL:Q9EYZ1 (EMBL:AF308446) (247 aa) fasta scores: E(): 3.3e-25, 37.44 38d in 211 aa, and to Bacillus subtilis cytochrome C-type biogenesis protein CcdA or bsu17930 SWALL:CCDA_BACSU (SWALL:P45706) (235 aa) fasta scores: E(): 1.8e-21, 32.03 38d in 231 aa; cytochrome C biogenesis protein 310028..310711 Clostridium botulinum A str. ATCC 3502 5184517 YP_001252806.1 CDS resA NC_009495.1 310733 311299 D Similar to Bacillus subtilis thiol-disulfide oxidoreductase ResA or bsu23150 SWALL:RESA_BACSU (SWALL:P35160) (179 aa) fasta scores: E(): 2.6e-11, 29.03 id in 186 aa; thiol-disulfide oxidoreductase ResA 310733..311299 Clostridium botulinum A str. ATCC 3502 5184518 YP_001252807.1 CDS CBO0264 NC_009495.1 311324 312001 D Similar to Enterococcus faecium regulatory protein VanR SWALL:VANR_ENTFC (SWALL:Q06239) (231 aa) fasta scores: E(): 7.1e-27, 41.66 38d in 228 aa, and to Thermoanaerobacter tengcongensis response regulators consisting of a chey-like receiver domain and a hth DNA-binding domain ompr6 or tte2474 SWALL:Q8R7E1 (EMBL:AE013188) (231 aa) fasta scores: E(): 3.6e-39,51.32 38d in 226 aa; DNA-binding response regulator 311324..312001 Clostridium botulinum A str. ATCC 3502 5184519 YP_001252808.1 CDS CBO0265 NC_009495.1 311994 313391 D Similar to Clostridium perfringens two-component sensor histidine kinase cpe2331 SWALL:Q8XHZ3 (EMBL:AP003193) (467 aa) fasta scores: E(): 1.2e-57,38.36 38d in 464 aa; sensor histidine kinase 311994..313391 Clostridium botulinum A str. ATCC 3502 5184520 YP_001252809.1 CDS CBO0266 NC_009495.1 313753 314847 R Similar to Clostridium perfringens probable reticuline oxidase cpe0406 SWALL:Q8XND2 (EMBL:AP003186) (448 aa) fasta scores: E(): 4.9e-57, 42.33 38d in 352 aa; FAD-dependent oxidoreductase complement(313753..314847) Clostridium botulinum A str. ATCC 3502 5184521 YP_001252810.1 CDS CBO0267 NC_009495.1 315150 316475 D Similar to Klebsiella pneumoniae 6-phospho-alpha-glucosidase aglB SWALL:AGLB_KLEPN (SWALL:Q9AGA6) (440 aa) fasta scores: E(): 2.3e-79, 47.17 id in 443 aa; glycosyl hydrolase 315150..316475 Clostridium botulinum A str. ATCC 3502 5184522 YP_001252811.1 CDS CBO0268 NC_009495.1 316638 318161 D Similar to Escherichia coli PTS system, maltose and glucose-specific IIabc component MalX or b1621 SWALL:PTOA_ECOLI (SWALL:P19642) (530 aa) fasta scores: E(): 6.6e-55, 40.03 38d in 522 aa; PTS system, maltose/glucose-specfic, IIBC component 316638..318161 Clostridium botulinum A str. ATCC 3502 5184523 YP_001252812.1 CDS CBO0269 NC_009495.1 318212 318979 R Similar to Escherichia coli, and Escherichia coli O6 HTH-type transcriptional regulator RpiR or alsr or b4089 or c5095 SWALL:RPIR_ECOLI (SWALL:P39266) (296 aa) fasta scores: E(): 1.4e-06, 21.23 38d in 226 aa, and to Enterococcus faecalis ef0065 or ef0539 SWALL:Q8KU94 (EMBL:AF454824) (272 aa) fasta scores: E(): 3.6e-14,29.09 38d in 244 aa; transcriptional regulator complement(318212..318979) Clostridium botulinum A str. ATCC 3502 5184524 YP_001252813.1 CDS CBO0270 NC_009495.1 318995 319774 R Similar to Bacillus subtilis hth-type transcriptional regulator GlvR or bsu08190 SWALL:GLVR_BACSU (SWALL:P54717) (254 aa) fasta scores: E(): 1.6e-08, 23.55 38d in 259 aa; transcriptional regulator complement(318995..319774) Clostridium botulinum A str. ATCC 3502 5184525 YP_001252814.1 CDS CBO0271 NC_009495.1 320050 320532 D Similar to Salmonella typhimurium, and Salmonella typhi PTS system, glucose-specific IIa component Crr or stm2433 or sty2670 or t0424 SWALL:PTGA_SALTY (SWALL:P02908) (168 aa) fasta scores: E(): 1.4e-13, 40.58 id in 138 aa; PTS system glucose family transporter subunit IIA 320050..320532 Clostridium botulinum A str. ATCC 3502 5184526 YP_001252815.1 CDS CBO0272 NC_009495.1 320699 321406 D Similar to Clostridium tetani two-component response regulator ctc00392 SWALL:Q898Q1 (EMBL:AE015937) (231 aa) fasta scores: E(): 1.4e-78, 90.47 38d in 231 aa; DNA-binding response regulator 320699..321406 Clostridium botulinum A str. ATCC 3502 5184527 YP_001252816.1 CDS CBO0273 NC_009495.1 321407 322465 D Similar to Clostridium tetani two-component sensor histidine kinase ctc00393 SWALL:Q898Q0 (EMBL:AE015937) (352 aa) fasta scores: E(): 9.2e-107, 85.22 38d in 352 aa; sensor histidine kinase 321407..322465 Clostridium botulinum A str. ATCC 3502 5184528 YP_001252817.1 CDS CBO0274 NC_009495.1 322585 323355 D Similar to Clostridium tetani ABC transporter ATP-binding protein ctc00394 SWALL:Q898P9 (EMBL:AE015937) (256 aa) fasta scores: E(): 1.2e-81, 95.31 38d in 256 aa; peptide ABC transporter Pep4E family, ATP-binding protein 322585..323355 Clostridium botulinum A str. ATCC 3502 5187722 YP_001252818.1 CDS CBO0275 NC_009495.1 323369 325339 D Similar to Clostridium tetani ABC transporter permease ctc00396 SWALL:Q898P8 (EMBL:AE015937) (655 aa) fasta scores: E(): 5.2e-203, 90.24 38d in 656 aa; peptide ABC transporter Pep4E family, permease 323369..325339 Clostridium botulinum A str. ATCC 3502 5184530 YP_001252819.1 CDS alr NC_009495.1 325579 326793 D converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 325579..326793 Clostridium botulinum A str. ATCC 3502 5184531 YP_001252820.1 CDS CBO0277 NC_009495.1 327313 328884 D Similar to Bacillus subtilis PTS system,arbutin-like IIbc component GlvC or GlvCB or Glv-2 or bsu08200 SWALL:PTIB_BACSU (SWALL:P54715) (527 aa) fasta scores: E(): 8.6e-61, 36.41 38d in 530 aa, and to Klebsiella pneumoniae PTS system, alpha-glucoside-specific IIbc component AglA SWALL:PTAB_KLEPN (SWALL:Q9AGA7) (540 aa) fasta scores: E(): 3.3e-59, 35.53 38d in 529 aa; Also highly similar to CBO0288 (53.2 38d); PTS system, glucose/glucoside family, IIBC component 327313..328884 Clostridium botulinum A str. ATCC 3502 5184532 YP_001252821.1 CDS glvA1 NC_009495.1 329200 330525 D Similar to Bacillus subtilis maltose-6'-phosphate glucosidase GlvA or GlvG or Glv-1 or bsu08180 SWALL:GLVA_BACSU (SWALL:P54716) (449 aa) fasta scores: E(): 3.5e-140, 77.44 38d in 439 aa; Also similar to CBO0289 (73.69 38d) and CBO0267 (48.19 38d); Also highly similar to CBO0289 (73.69 38d); maltose-6'-phosphate glucosidase 329200..330525 Clostridium botulinum A str. ATCC 3502 5184533 YP_001252822.1 CDS crr NC_009495.1 330839 331348 D Similar to Bacillus subtilis PTS system,glucose-specific IIabc component PtsG or PtsX or Crr or bsu13890 SWALL:PTGA_BACSU (SWALL:P20166) (699 aa) fasta scores: E(): 3.7e-24, 52.56 38d in 156 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri PTS system, glucose-specific IIa component Crr or Gsr or Iex or Tgs or TreD or b2417 or c2952 or sf2472 or s2618 SWALL:PTGA_ECOLI (SWALL:P08837) (168 aa) fasta scores: E(): 2.1e-22, 42.35 38d in 170 aa; PTS system glucose/glucoside family transporter subunit IIA 330839..331348 Clostridium botulinum A str. ATCC 3502 5184534 YP_001252823.1 CDS CBO0280 NC_009495.1 331631 332392 D Similar to Bacillus subtilis hth-type transcriptional regulator GlvR or bsu08190 SWALL:GLVR_BACSU (SWALL:P54717) (254 aa) fasta scores: E(): 3.9e-06, 26.17 38d in 256 aa; transcriptional regulator 331631..332392 Clostridium botulinum A str. ATCC 3502 5184535 YP_001252824.1 CDS CBO0281 NC_009495.1 332429 332611 R Similar to the C-terminal region of Clostridium acetobutylicum hypothetical protein Cac0806 SWALL:Q97KW0 (EMBL:AE007596) (209 aa) fasta scores: E(): 2.3e-07,51.56 38d in 64 aa; hypothetical protein complement(332429..332611) Clostridium botulinum A str. ATCC 3502 5184536 YP_001252825.1 CDS cspA NC_009495.1 332880 333077 D Similar to Lactobacillus plantarum cold shock protein 2 CspL or Lp_0031 SWALL:CSP2_LACPL (SWALL:P96349) (66 aa) fasta scores: E(): 3.8e-15, 68.85 38d in 61 aa; Also similar to CBO1387 (63.9 38d.) and CBO1772 (49. 38d.).; cold shock protein 332880..333077 Clostridium botulinum A str. ATCC 3502 5184537 YP_001252826.1 CDS CBO0283 NC_009495.1 333419 333973 D Similar to Enterococcus faecalis hypothetical protein ef0747 SWALL:Q837T3 (EMBL:AE016949) (236 aa) fasta scores: E(): 4.1e-24, 45.81 38d in 179 aa, and to Agrobacterium tumefaciens hypothetical protein atu1659 atu1659 or agr_c_3054 SWALL:Q8UEU5 (EMBL:AE009122) (217 aa) fasta scores: E(): 1.1e-21, 55.03 38d in 129 aa; hypothetical protein 333419..333973 Clostridium botulinum A str. ATCC 3502 5184538 YP_001252827.1 CDS CBO0284 NC_009495.1 334408 334839 D Similar to Bacillus anthracis rrf2 family protein ba4743 SWALL:Q81L85 (EMBL:AE017038) (143 aa) fasta scores: E(): 2e-33, 65.03 38d in 143 aa; transcriptional regulator 334408..334839 Clostridium botulinum A str. ATCC 3502 5184539 YP_001252828.1 CDS CBO0285 NC_009495.1 334991 335596 D Similar to Pseudomonas putida 2-hydroxychromene-2-carboxylate isomerase NahD SWALL:NAHD_PSEPU (SWALL:Q51948) (203 aa) fasta scores: E(): 0.00039, 24 38d in 200 aa, and to Burkholderia sp. DBT1 DbtD SWALL:Q93NA9 (EMBL:AF380367) (207 aa) fasta scores: E(): 1.9e-07, 25.37 38d in 201 aa; 2-hydroxychromene-2-carboxylate isomerase 334991..335596 Clostridium botulinum A str. ATCC 3502 5184540 YP_001252829.1 CDS CBO0286 NC_009495.1 335623 336261 D Similar to Chromobacterium violaceum hypothetical protein cv0714 SWALL:AAQ58390 (EMBL:AE016912) (212 aa) fasta scores: E(): 5.1e-27, 45.07 38d in 213 aa; hypothetical protein 335623..336261 Clostridium botulinum A str. ATCC 3502 5184541 YP_001252830.1 CDS CBO0287 NC_009495.1 336699 337460 D Similar to Bacillus subtilis HTH-type transcriptional regulator GlvR or bsu08190 SWALL:GLVR_BACSU (SWALL:P54717) (254 aa) fasta scores: E(): 4.8e-07, 25.71 38d in 245 aa; transcriptional regulator 336699..337460 Clostridium botulinum A str. ATCC 3502 5184542 YP_001252831.1 CDS CBO0288 NC_009495.1 337567 339162 D Similar to Escherichia coli PTS system, maltose and glucose-specific IIabc component MalX or b1621 SWALL:PTOA_ECOLI (SWALL:P19642) (530 aa) fasta scores: E(): 1.5e-62, 38.43 38d in 523 aa, and to Bacillus subtilis PTS system, arbutin-like IIbc component GlvC or GlvCB or glv-2 or bsu08200 SWALL:PTIB_BACSU (SWALL:P54715) (527 aa) fasta scores: E(): 5.1e-61, 37.73 38d in 530 aa; Also highly similar to CBO0277 (53.2 38d); PTS system glucose/maltose-specfic transporter subunit IIBC 337567..339162 Clostridium botulinum A str. ATCC 3502 5184543 YP_001252832.1 CDS glvA2 NC_009495.1 339424 340758 D Similar to Bacillus subtilis maltose-6'-phosphate glucosidase GlvA or GlvG or glv-1 or bsu08180 SWALL:GLVA_BACSU (SWALL:P54716) (449 aa) fasta scores: E(): 7.5e-125, 68.55 38d in 442 aa, and to Escherichia coli probable 6-phospho-alpha-glucosidase GlvG or b3681 SWALL:GLVG_ECOLI (SWALL:P31450) (212 aa) fasta scores: E(): 7e-59, 72.68 38d in 205 aa; Also similar to CBO0278 (73.69 38d) and CBO0267 (49.21 38d); Also highly similar to CBO0278 (73.69 38d); maltose-6'-phosphate glucosidase 339424..340758 Clostridium botulinum A str. ATCC 3502 5184544 YP_001252833.1 CDS CBO0290 NC_009495.1 340771 341244 D Similar to Salmonella typhimurium, and Salmonella typhi PTS system, glucose-specific IIa component crr or stm2433 or sty2670 or t0424 SWALL:PTGA_SALTY (SWALL:P02908) (168 aa) fasta scores: E(): 3.7e-15, 40 38d in 150 aa; PTS system glucose/maltose-specific transporter subunit IIA 340771..341244 Clostridium botulinum A str. ATCC 3502 5184545 YP_001252834.1 CDS CBO0291 NC_009495.1 341382 343097 D Similar to Escherichia coli, and Escherichia coli O157:H7 phosphogluconate dehydratase edd or b1851 or z2903 or ecs2561 SWALL:EDD_ECOLI (SWALL:P25530) (603 aa) fasta scores: E(): 5.8e-37, 31.08 38d in 505 aa, and to Clostridium acetobutylicum dihydroxyacid dehydratase cac3604 SWALL:Q97D76 (EMBL:AE007856) (572 aa) fasta scores: E(): 1.4e-145, 63.79 38d in 569 aa; dihydroxy-acid dehydratase 341382..343097 Clostridium botulinum A str. ATCC 3502 5184546 YP_001252835.1 CDS kdgA NC_009495.1 343149 343796 D Similar to Bacillus subtilis khg/kdpg aldolase [includes: 4-hydroxy-2-oxoglutarate aldolase KdgA or bsu22100 SWALL:ALKH_BACSU (SWALL:P50846) (196 aa) fasta scores: E(): 4.1e-17, 35.6 38d in 191 aa, and to Streptococcus agalactiae 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase eda-2 or sag1907 SWALL:Q8DXE4 (EMBL:AE014277) (212 aa) fasta scores: E(): 1.6e-39, 54.76 38d in 210 aa; 2-dehydro-3-deoxyphosphogluconate aldolase 343149..343796 Clostridium botulinum A str. ATCC 3502 5184547 YP_001252836.1 CDS kdgK NC_009495.1 343798 344802 D Similar to Escherichia coli 2-dehydro-3-deoxygluconokinase KdgK or b3526 SWALL:KDGK_ECOLI (SWALL:P37647) (309 aa) fasta scores: E(): 2e-08, 26.46 38d in 291 aa; 2-dehydro-3-deoxygluconokinase 343798..344802 Clostridium botulinum A str. ATCC 3502 5184548 YP_001252837.1 CDS ade NC_009495.1 345062 346861 D Similar to Bacillus subtilis adenine deaminase AdeC or Ade or bsu14520 SWALL:ADEC_BACSU (SWALL:P39761) (577 aa) fasta scores: E(): 5e-63, 36.17 38d in 575 aa; adenine deaminase 345062..346861 Clostridium botulinum A str. ATCC 3502 5184549 YP_001252838.1 CDS cssR NC_009495.1 347264 347941 D Similar to Bacillus subtilis transcriptional regulatory protein CssR or bsu33010 SWALL:CSSR_BACSU (SWALL:O32192) (225 aa) fasta scores: E(): 1.1e-40, 50.89 id in 224 aa; DNA-binding response regulator 347264..347941 Clostridium botulinum A str. ATCC 3502 5184550 YP_001252839.1 CDS cssS NC_009495.1 347941 349326 D Similar to Bacillus subtilis sensor protein CssS or bsu33020 SWALL:CSSS_BACSU (SWALL:O32193) (451 aa) fasta scores: E(): 9e-33, 30.17 38d in 464 aa; sensor histidine kinase 347941..349326 Clostridium botulinum A str. ATCC 3502 5184551 YP_001252840.1 CDS CBO0297 NC_009495.1 349611 350579 D Similar to Escherichia coli bactoprenol glucosyl transferase homolog from prophage cps-53 yfdh or b2351 SWALL:GTRB_ECOLI (SWALL:P77293) (306 aa) fasta scores: E(): 2.1e-39, 40.26 38d in 298 aa; glycosyl transferase family protein 349611..350579 Clostridium botulinum A str. ATCC 3502 5184552 YP_001252841.1 CDS CBO0298 NC_009495.1 350563 350982 D Similar to Actinobacillus actinomycetemcomitans dTDP-glucose-4-keto-6-deoxy-D-glucose reductase Fcd SWALL:Q9AQB3 (EMBL:AF213680) (130 aa) fasta scores: E(): 1.3e-05, 30.46 38d in 128 aa, and to Listeria innocua teichoic acid glycosylation protein GtcA SWALL:Q9KJU8 (EMBL:AF160251) (145 aa) fasta scores: E(): 0.0023, 25.58 id in 129 aa; cell wall teichoic acid glycosylation protein GtcA 350563..350982 Clostridium botulinum A str. ATCC 3502 5184553 YP_001252842.1 CDS CBO0299 NC_009495.1 351101 353374 D Similar to Streptomyces carzinostaticus subsp. neocarzinostaticus membrane protein SWALL:Q84HC4 (EMBL:AY117439) (720 aa) fasta scores: E(): 2.4e-25,27.37 38d in 767 aa; dolichyl-phosphate-mannose-protein mannosyltransferase 351101..353374 Clostridium botulinum A str. ATCC 3502 5184554 YP_001252843.1 CDS CBO0300 NC_009495.1 353730 354767 D Similar to Clostridium tetani transcriptional regulatory protein ctc01411 SWALL:Q894X3 (EMBL:AE015941) (329 aa) fasta scores: E(): 4.8e-11, 27.5 38d in 349 aa; AraC family transcriptional regulator 353730..354767 Clostridium botulinum A str. ATCC 3502 5187312 YP_001252844.1 CDS CBO0301 NC_009495.1 355032 356063 D Similar to Clostridium tetani iron(III) dicitrate-binding periplasmic protein ctc00960 SWALL:Q896P0 (EMBL:AE015939) (354 aa) fasta scores: E(): 4.9e-30, 32 38d in 350 aa; iron chelate uptake ABC transporter FeCT family, solute-binding protein 355032..356063 Clostridium botulinum A str. ATCC 3502 5187727 YP_001252845.1 CDS CBO0302 NC_009495.1 356066 357184 D Similar to Bordetella avium BhuU bhuU SWALL:Q8L1U4 (EMBL:AY095952) (334 aa) fasta scores: E(): 1.2e-35,38.69 38d in 336 aa, and to Clostridium tetani iron(iii) dicitrate transport system permease fecd or ctc00961 SWALL:Q896N9 (EMBL:AE015939) (377 aa) fasta scores: E(): 9.5e-69, 53.93 38d in 343 aa; iron ABC transporter permease 356066..357184 Clostridium botulinum A str. ATCC 3502 5184557 YP_001252846.1 CDS CBO0303 NC_009495.1 357186 357956 D Similar to Streptococcus agalactiae FhuC fhuC SWALL:Q8VQV6 (EMBL:AF452237) (264 aa) fasta scores: E(): 5.2e-26, 31.9 38d in 257 aa, and to Clostridium tetani hemin transport system ATP-binding protein fece fece or ctc00962 SWALL:Q896N8 (EMBL:AE015939) (252 aa) fasta scores: E(): 4.8e-47, 55.15 38d in 252 aa; iron ABC transporter ATP-binding protein 357186..357956 Clostridium botulinum A str. ATCC 3502 5184558 YP_001252847.1 CDS CBO0304 NC_009495.1 357992 359320 D Similar to Clostridium acetobutylicum probable cation efflux pump cac3354 SWALL:Q97DW6 (EMBL:AE007832) (452 aa) fasta scores: E(): 9.7e-57, 38.73 38d in 426 aa; drug/sodium antiporter 357992..359320 Clostridium botulinum A str. ATCC 3502 5184559 YP_001252848.1 CDS CBO0305 NC_009495.1 359465 360436 R Similar to Clostridium tetani transcriptional regulatory protein ctc00913 SWALL:Q896T5 (EMBL:AE015939) (334 aa) fasta scores: E(): 1.4e-09, 26.42 38d in 333 aa; AraC family transcriptional regulator complement(359465..360436) Clostridium botulinum A str. ATCC 3502 5184560 YP_001252849.1 CDS CBO0306 NC_009495.1 360883 361821 D Similar to Bacillus subtilis ferrichrome-binding protein precursor FhuD or bsu33320 SWALL:FHUD_BACSU (SWALL:P37580) (315 aa) fasta scores: E(): 5.4e-25, 31.73 id in 312 aa. Also similar to CBO0310 35.144 38dentity in 313 aa overlap; ferrichrome-binding protein 360883..361821 Clostridium botulinum A str. ATCC 3502 5184561 YP_001252850.1 CDS CBO0307 NC_009495.1 361882 361998 D hypothetical protein 361882..361998 Clostridium botulinum A str. ATCC 3502 5187137 YP_001252851.1 CDS CBO0308 NC_009495.1 362160 363128 R Similar to Clostridium tetani transcriptional regulatory protein ctc01411 SWALL:Q894X3 (EMBL:AE015941) (329 aa) fasta scores: E(): 7.3e-10, 22.29 38d in 323 aa; AraC family transcriptional regulator complement(362160..363128) Clostridium botulinum A str. ATCC 3502 5184563 YP_001252852.1 CDS CBO0309 NC_009495.1 363302 363415 D Similar to N-terminal regions of several NADH dehydrogenase subunit 1 SWALL:Q953M0 (EMBL:AF348079) (318 aa) fasta scores: E(): 2.1, 47.05 38d in 34 aa; NADH dehydrogenase subunit 1 (partial) 363302..363415 Clostridium botulinum A str. ATCC 3502 5184564 YP_001252853.1 CDS fhuD1 NC_009495.1 363446 364375 D Similar to Bacillus subtilis ferrichrome-binding protein precursor FhuD or bsu33320 SWALL:FHUD_BACSU (SWALL:P37580) (315 aa) fasta scores: E(): 6.9e-19, 32.39 id in 321 aa. Also similar to CBO0306 35.144 38dentity in 313 aa overlap; ferrichrome-binding protein 363446..364375 Clostridium botulinum A str. ATCC 3502 5184565 YP_001252854.1 CDS fhuB1 NC_009495.1 364402 365430 D Similar to Bacillus subtilis ferrichrome transport system permease FhuB or bsu33310 SWALL:FHUB_BACSU (SWALL:P49936) (384 aa) fasta scores: E(): 2.1e-53, 46.52 id in 331 aa; iron compound ABC transporter permease 364402..365430 Clostridium botulinum A str. ATCC 3502 5187902 YP_001252855.1 CDS fhuG1 NC_009495.1 365427 366440 D Similar to Bacillus subtilis ferrichrome transport system permease FhuG or bsu33300 SWALL:FHUG_BACSU (SWALL:P49937) (336 aa) fasta scores: E(): 3.4e-51, 41.39 id in 343 aa; iron compound ABC transporter permease 365427..366440 Clostridium botulinum A str. ATCC 3502 5184567 YP_001252856.1 CDS fhuC1 NC_009495.1 366451 367281 D Similar to Bacillus subtilis ferrichrome transport ATP-binding protein FhuC or bsu33290 SWALL:FHUC_BACSU (SWALL:P49938) (269 aa) fasta scores: E(): 3.1e-60, 63.29 id in 267 aa; ferrichrome ABC transporter ATP-binding protein 366451..367281 Clostridium botulinum A str. ATCC 3502 5184568 YP_001252857.1 CDS CBO0314 NC_009495.1 367278 369002 D Similar to Clostridium perfringens probable ABC transporter cpe2296 SWALL:Q8XI28 (EMBL:AP003193) (566 aa) fasta scores: E(): 2.6e-72, 41.62 38d in 567 aa; ABC transporter permease/ATP-binding protein 367278..369002 Clostridium botulinum A str. ATCC 3502 5184569 YP_001252858.1 CDS CBO0315 NC_009495.1 369057 369437 R Similar to Escherichia coli, and Escherichia coli O6 transcriptional regulator MntR or b0817 or c0903 SWALL:MNTR_ECOLI (SWALL:P75787) (155 aa) fasta scores: E(): 3.6e-07, 30 38d in 120 aa; iron dependent repressor complement(369057..369437) Clostridium botulinum A str. ATCC 3502 5184570 YP_001252859.1 CDS pbuX NC_009495.1 370136 371437 D Similar to Bacillus subtilis xanthine permease PbuX or bsu22060 SWALL:PBUX_BACSU (SWALL:P42086) (438 aa) fasta scores: E(): 1e-52, 37.77 38d in 405 aa; xanthine/uracil permease 370136..371437 Clostridium botulinum A str. ATCC 3502 5184571 YP_001252860.1 CDS xpt NC_009495.1 371460 372032 D Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase 371460..372032 Clostridium botulinum A str. ATCC 3502 5184572 YP_001252861.1 CDS CBO0318 NC_009495.1 372483 373175 D Similar to Bacillus cereus two-component response regulator bc4835 SWALL:Q816J5 (EMBL:AE017013) (231 aa) fasta scores: E(): 7.7e-51, 60.08 38d in 228 aa; DNA-binding response regulator 372483..373175 Clostridium botulinum A str. ATCC 3502 5184573 YP_001252862.1 CDS CBO0319 NC_009495.1 373188 374168 D Similar to Bacillus cereus two component system histidine kinase bc4836 SWALL:Q816J4 (EMBL:AE017013) (340 aa) fasta scores: E(): 4.2e-48, 41.53 38d in 325 aa; sensor histidine kinase 373188..374168 Clostridium botulinum A str. ATCC 3502 5187013 YP_001252863.1 CDS upk1 NC_009495.1 374344 375201 D BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters UDP disphosphate which reduces the pool of lipid carrier available to the cell; UDP pyrophosphate phosphatase 374344..375201 Clostridium botulinum A str. ATCC 3502 5184575 YP_001252864.1 CDS CBO0321 NC_009495.1 375216 375962 D Similar to Bacillus cereus ABC transporter ATP-binding protein bc4839 SWALL:Q816J1 (EMBL:AE017013) (250 aa) fasta scores: E(): 7.3e-58, 68.16 38d in 245 aa; peptide ABC transporter Pep4E family, ATP-binding protein 375216..375962 Clostridium botulinum A str. ATCC 3502 5184576 YP_001252865.1 CDS CBO0322 NC_009495.1 375962 377824 D Similar to Bacillus cereus ABC transporter permease bc1995 SWALL:Q81EI1 (EMBL:AE017004) (626 aa) fasta scores: E(): 2e-63, 34.07 38d in 628 aa; peptide ABC transporter Pep4E family, permease 375962..377824 Clostridium botulinum A str. ATCC 3502 5184577 YP_001252866.1 CDS CBO0323 NC_009495.1 377848 377994 D hypothetical protein 377848..377994 Clostridium botulinum A str. ATCC 3502 5187448 YP_001252867.1 CDS CBO0324 NC_009495.1 378321 378677 D Similar to Clostridium tetani protein,murein hydrolase exporter ctc01825 SWALL:Q893J3 (EMBL:AE015942) (117 aa) fasta scores: E(): 1.9e-30,67.52 38d in 117 aa; LrgA family protein 378321..378677 Clostridium botulinum A str. ATCC 3502 5187447 YP_001252868.1 CDS CBO0325 NC_009495.1 378680 379375 D Similar to Clostridium tetani murein hydrolase export regulator ctc01826 SWALL:Q893J2 (EMBL:AE015942) (229 aa) fasta scores: E(): 1.6e-59, 72.92 38d in 229 aa; lrgB-like family protein 378680..379375 Clostridium botulinum A str. ATCC 3502 5184580 YP_001252869.1 CDS CBO0326 NC_009495.1 379671 380321 D Similar to Clostridium acetobutylicum predicted membrane protein, cf-20 family cac0208 SWALL:Q97MI8 (EMBL:AE007534) (213 aa) fasta scores: E(): 2.4e-19,35.04 38d in 214 aa; lipoprotein 379671..380321 Clostridium botulinum A str. ATCC 3502 5187012 YP_001252870.1 CDS CBO0327 NC_009495.1 380726 381133 D Similar to Clostridium acetobutylicum uncharacterized protein cac3492 SWALL:Q97DI5 (EMBL:AE007846) (290 aa) fasta scores: E(): 2.2e-20,54.63 38d in 108 aa; radical SAM superfamily protein 380726..381133 Clostridium botulinum A str. ATCC 3502 5187617 YP_001252871.1 CDS CBO0328 NC_009495.1 381166 381618 D Similar to the C-terminal region of Clostridium acetobutylicum uncharacterized protein cac3492 SWALL:Q97DI5 (EMBL:AE007846) (290 aa) fasta scores: E(): 3.4e-15, 41.04 38d in 134 aa; hypothetical protein 381166..381618 Clostridium botulinum A str. ATCC 3502 5184583 YP_001252872.1 CDS CBO0329 NC_009495.1 381753 383261 D Similar to Clostridium tetani ATP-dependent Zn protease ctc00401 SWALL:Q898P3 (EMBL:AE015937) (509 aa) fasta scores: E(): 1.3e-177, 88.84 38d in 502 aa; hypothetical protein 381753..383261 Clostridium botulinum A str. ATCC 3502 5184584 YP_001252873.1 CDS CBO0330 NC_009495.1 383585 384136 D Similar to Clostridium perfringens hypothetical protein Cpe1563 SWALL:Q8XK40 (EMBL:AP003191) (188 aa) fasta scores: E(): 3.1e-37, 53.4 38d in 176 aa; hypothetical protein 383585..384136 Clostridium botulinum A str. ATCC 3502 5184585 YP_001252874.1 CDS CBO0331 NC_009495.1 384315 384782 D Similar to Clostridium perfringens hypothetical protein Cpe1562 SWALL:Q8XK41 (EMBL:AP003191) (169 aa) fasta scores: E(): 1.6e-23, 40.52 38d in 153 aa; Also similar to CBO0335 (34.4 38d) and CBO0337 (42.6 38d).; hypothetical protein 384315..384782 Clostridium botulinum A str. ATCC 3502 5184586 YP_001252875.1 CDS CBO0332 NC_009495.1 384775 385464 D Similar to Clostridium perfringens hypothetical protein Cpe1561 SWALL:Q8XK42 (EMBL:AP003191) (214 aa) fasta scores: E(): 1.3e-33, 44.39 38d in 214 aa; accessory gene regulator protein B 384775..385464 Clostridium botulinum A str. ATCC 3502 5184587 YP_001252876.1 CDS CBO0332A NC_009495.1 385448 385582 D lipoprotein 385448..385582 Clostridium botulinum A str. ATCC 3502 5204255 YP_001252877.1 CDS CBO0333 NC_009495.1 385654 387357 D Similar to Clostridium perfringens hypothetical protein Cpe1560 SWALL:Q8XK43 (EMBL:AP003191) (563 aa) fasta scores: E(): 3.2e-129, 61.02 38d in 567 aa; diguanylate cyclase 385654..387357 Clostridium botulinum A str. ATCC 3502 5184588 YP_001252878.1 CDS CBO0334 NC_009495.1 387588 388097 D Similar to Bacillus anthracis acetyltransferase,GnaT family ba3530 SWALL:Q81YL2 (EMBL:AE017035) (179 aa) fasta scores: E(): 3e-05, 25.94 38d in 158 aa; GNAT family acetyltransferase 387588..388097 Clostridium botulinum A str. ATCC 3502 5184589 YP_001252879.1 CDS CBO0335 NC_009495.1 388494 388946 D Similar to Clostridium perfringens hypothetical protein Cpe1562 SWALL:Q8XK41 (EMBL:AP003191) (169 aa) fasta scores: E(): 6.5e-10, 28.77 38d in 139 aa; Also similar to CBO0331 (34.4 38d) and CBO0337 (33.1 38d).; hypothetical protein 388494..388946 Clostridium botulinum A str. ATCC 3502 5184590 YP_001252880.1 CDS CBO0336 NC_009495.1 388973 390820 D Similar to Clostridium acetobutylicum sensory transduction histidine kinase cac0903 SWALL:Q97KL4 (EMBL:AE007605) (683 aa) fasta scores: E(): 3e-47, 32.62 id in 610 aa; two-component sensor histidine kinase 388973..390820 Clostridium botulinum A str. ATCC 3502 5184591 YP_001252881.1 CDS CBO0337 NC_009495.1 391046 391513 D Similar to Clostridium perfringens hypothetical protein Cpe1562 SWALL:Q8XK41 (EMBL:AP003191) (169 aa) fasta scores: E(): 4.2e-18, 39.07 38d in 151 aa; Also similar to CBO0331 (42. 38d) and CBO0335 (33.1 38d).; hypothetical protein 391046..391513 Clostridium botulinum A str. ATCC 3502 5187194 YP_001252882.1 CDS CBO0338 NC_009495.1 391500 392129 D Similar to Clostridium perfringens hypothetical protein Cpe1561 SWALL:Q8XK42 (EMBL:AP003191) (214 aa) fasta scores: E(): 8.7e-24, 35.92 38d in 206 aa; accessory gene regulator protein B 391500..392129 Clostridium botulinum A str. ATCC 3502 5184593 YP_001252883.1 CDS CBO0339 NC_009495.1 392204 392338 D hypothetical protein 392204..392338 Clostridium botulinum A str. ATCC 3502 5184594 YP_001252884.1 CDS CBO0340 NC_009495.1 392421 394274 D Similar to Clostridium acetobutylicum sensory transduction histidine kinase cac0903 SWALL:Q97KL4 (EMBL:AE007605) (683 aa) fasta scores: E(): 1.1e-45,34.81 38d in 586 aa; two-component sensor kinase 392421..394274 Clostridium botulinum A str. ATCC 3502 5184595 YP_001252885.1 CDS CBO0341 NC_009495.1 394506 395372 D Similar to Clostridium perfringens hypothetical protein Cpe1494 SWALL:Q8XKA6 (EMBL:AP003190) (277 aa) fasta scores: E(): 1.7e-64, 73.63 38d in 220 aa; PP-loop family protein 394506..395372 Clostridium botulinum A str. ATCC 3502 5184596 YP_001252886.1 CDS CBO0342 NC_009495.1 395496 396041 R Similar to Fusobacterium nucleatum transcriptional regulator, MerR family fn1928 SWALL:Q8RHS0 (EMBL:AE010495) (184 aa) fasta scores: E(): 2.5e-14, 36.06 38d in 183 aa; DNA-binding protein complement(395496..396041) Clostridium botulinum A str. ATCC 3502 5184597 YP_001252887.1 CDS CBO0343 NC_009495.1 396396 397802 D Similar to Clostridium perfringens membrane-spanning transporter protein cpe0166 SWALL:Q8XP02 (EMBL:AP003185) (495 aa) fasta scores: E(): 1.3e-43,30.62 38d in 480 aa; amino acid permease 396396..397802 Clostridium botulinum A str. ATCC 3502 5184598 YP_001252888.1 CDS CBO0344 NC_009495.1 397921 399003 D Similar to Clostridium perfringens probable proline dipeptidase cpe2497 SWALL:Q8XHI6 (EMBL:AP003194) (358 aa) fasta scores: E(): 1.7e-79, 56.11 38d in 360 aa; metallopeptidase 397921..399003 Clostridium botulinum A str. ATCC 3502 5184599 YP_001252889.1 CDS aad NC_009495.1 399431 402019 D Similar to Clostridium acetobutylicum aldehyde-alcohol dehydrogenase [includes: alcohol dehydrogenase; acetaldehyde dehydrogenase [acetylating] (EC 1.2.1.10) (acdh); pyruvate-formate-lyase deactivase (pfl deactivase)] AdhE or Aad or cap0162 SWALL:ADHE_CLOAB (SWALL:P33744) (862 aa) fasta scores: E(): 2.6e-212,65.04 38d in 861 aa, and to Escherichia coli, and Escherichia coli O157:H7 aldehyde-alcohol dehydrogenase [includes: alcohol dehydrogenase; acetaldehyde dehydrogenase [acetylating] (EC 1.2.1.10) (acdh); pyruvate-formate-lyase deactivase (pfl deactivase)] AdhE or Ana or b1241 or z2016 or ecs1741 SWALL:ADHE_ECOLI (SWALL:P17547) (890 aa) fasta scores: E(): 1.3e-201,62.44 38d in 860 aa; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 399431..402019 Clostridium botulinum A str. ATCC 3502 5184600 YP_001252890.1 CDS CBO0346 NC_009495.1 402338 402625 D Similar to Clostridium acetobutylicum predicted diverged chey-domain cac1602 SWALL:Q97IN8 (EMBL:AE007670) (103 aa) fasta scores: E(): 6.3e-16, 47.87 38d in 94 aa; hypothetical protein 402338..402625 Clostridium botulinum A str. ATCC 3502 5184601 YP_001252891.1 CDS CBO0347 NC_009495.1 402688 403278 D Similar to Clostridium tetani protein ctc00782 SWALL:Q897F6 (EMBL:AE015938) (202 aa) fasta scores: E(): 1.9e-28, 41.45 38d in 193 aa; hypothetical protein 402688..403278 Clostridium botulinum A str. ATCC 3502 5184602 YP_001252892.1 CDS CBO0348 NC_009495.1 403564 404031 R Similar to Clostridium acetobutylicum hypothetical protein Cac0449 SWALL:Q97LV5 (EMBL:AE007559) (156 aa) fasta scores: E(): 1.5e-29, 56.66 38d in 150 aa; hypothetical protein complement(403564..404031) Clostridium botulinum A str. ATCC 3502 5184603 YP_001252893.1 CDS CBO0349 NC_009495.1 404386 405396 R Similar to Aspergillus oryzae fucose-specific lectin FleA SWALL:Q8TGE0 (EMBL:AB072379) (310 aa) fasta scores: E(): 0.00038, 23.27 38d in 275 aa, and to Clostridium tetani sialidase ctc00453 SWALL:Q898J4 (EMBL:AE015937) (292 aa) fasta scores: E(): 1.4e-89, 71.95 38d in 271 aa; carbohydrate-binding protein complement(404386..405396) Clostridium botulinum A str. ATCC 3502 5184604 YP_001252894.1 CDS CBO0350 NC_009495.1 405500 406027 D Similar to Clostridium perfringens hypothetical protein Cpe1026 SWALL:Q8XLL5 (EMBL:AP003189) (185 aa) fasta scores: E(): 3.9e-34, 54.7 38d in 170 aa; PAP2 family protein 405500..406027 Clostridium botulinum A str. ATCC 3502 5184605 YP_001252895.1 CDS CBO0351 NC_009495.1 406438 407250 D Similar to Clostridium acetobutylicum predicted xylanase/chitin deacetylase cac2396 SWALL:Q97GH1 (EMBL:AE007739) (280 aa) fasta scores: E(): 3.1e-34, 45.6 id in 250 aa; polysaccharide deacetylase 406438..407250 Clostridium botulinum A str. ATCC 3502 5184606 YP_001252896.1 CDS CBO0352 NC_009495.1 407358 408044 D Similar to Bacillus subtilis alkaline phosphatase synthesis transcriptional regulatory protein PhoP or bsu29110 SWALL:PHOP_BACSU (SWALL:P13792) (240 aa) fasta scores: E(): 1.6e-34, 46.72 38d in 229 aa; DNA-binding response regulator 407358..408044 Clostridium botulinum A str. ATCC 3502 5184607 YP_001252897.1 CDS CBO0353 NC_009495.1 408054 409448 D Similar to Clostridium tetani alkaline phosphatase synthesis sensor protein phor or ctc01951 SWALL:Q892Y2 (EMBL:AE015942) (471 aa) fasta scores: E(): 9.7e-94,56.86 38d in 459 aa; sensor histidine kinase 408054..409448 Clostridium botulinum A str. ATCC 3502 5184608 YP_001252898.1 CDS CBO0354 NC_009495.1 409511 411001 D Similar to Clostridium tetani protein ctc01950 SWALL:Q892Y3 (EMBL:AE015942) (509 aa) fasta scores: E(): 4.1e-53, 35.15 38d in 512 aa; lipoprotein 409511..411001 Clostridium botulinum A str. ATCC 3502 5184609 YP_001252899.1 CDS CBO0355 NC_009495.1 411045 411611 D Similar to Clostridium tetani rRNA methylase ctc00455 SWALL:Q898J2 (EMBL:AE015937) (192 aa) fasta scores: E(): 1.4e-32, 54.64 38d in 183 aa; hypothetical protein 411045..411611 Clostridium botulinum A str. ATCC 3502 5184610 YP_001252900.1 CDS CBO0356 NC_009495.1 411637 412311 D Similar to Clostridium tetani membrane spanning protein ctc01769 SWALL:Q893P4 (EMBL:AE015942) (220 aa) fasta scores: E(): 4.7e-43, 51.61 38d in 217 aa; DedA family protein 411637..412311 Clostridium botulinum A str. ATCC 3502 5187798 YP_001252901.1 CDS CBO0357 NC_009495.1 412452 415139 R Similar to Chromobacterium violaceum hypothetical protein cv0542 SWALL:AAQ58219 (EMBL:AE016911) (633 aa) fasta scores: E(): 2.3e-57, 35.07 38d in 536 aa; signaling protein complement(412452..415139) Clostridium botulinum A str. ATCC 3502 5184612 YP_001252902.1 CDS CBO0358 NC_009495.1 415330 416517 R Similar to Clostridium tetani protein ctc01330 SWALL:Q895E6 (EMBL:AE015940) (403 aa) fasta scores: E(): 1.5e-80, 50 38d in 398 aa; exported protein complement(415330..416517) Clostridium botulinum A str. ATCC 3502 5184613 YP_001252903.1 CDS CBO0359 NC_009495.1 416770 418110 D Similar to Thermoanaerobacter tengcongensis na+-driven multidrug efflux pump NorM2 or tte1811 SWALL:Q8R919 (EMBL:AE013133) (449 aa) fasta scores: E(): 1.7e-69, 42.41 38d in 448 aa; MATE efflux family protein 416770..418110 Clostridium botulinum A str. ATCC 3502 5184614 YP_001252904.1 CDS CBO0360 NC_009495.1 418302 418868 D Similar to Thermotoga maritima hypothetical protein Tm1558 tm1558 SWALL:Q9X1P4 (EMBL:AE001801) (182 aa) fasta scores: E(): 4.9e-25, 47.09 38d in 189 aa; metal dependent phosphohydrolase 418302..418868 Clostridium botulinum A str. ATCC 3502 5184615 YP_001252905.1 CDS CBO0361 NC_009495.1 419173 420447 D Similar to Methanosarcina mazei Na(+)/H(+) antiporter mm0294 SWALL:Q8Q044 (EMBL:AE013254) (596 aa) fasta scores: E(): 2.4e-25, 30.64 38d in 385 aa; transporter monovalent cation:proton antiporter-2 (CPA2) family 419173..420447 Clostridium botulinum A str. ATCC 3502 5187914 YP_001252906.1 CDS CBO0362 NC_009495.1 420582 421904 R Similar to Clostridium tetani aminotransferase ctc01359 SWALL:Q895C0 (EMBL:AE015940) (440 aa) fasta scores: E(): 6.2e-91, 55.55 38d in 432 aa; class V aminotransferase complement(420582..421904) Clostridium botulinum A str. ATCC 3502 5184617 YP_001252907.1 CDS CBO0363 NC_009495.1 422291 423301 D Similar to Clostridium tetani membrane spanning protein, similar to vegetatible incompatibility protein het-e-1 ctc01844 SWALL:Q893H9 (EMBL:AE015942) (345 aa) fasta scores: E(): 2.1e-54, 46.66 38d in 345 aa; hypothetical protein 422291..423301 Clostridium botulinum A str. ATCC 3502 5184618 YP_001252908.1 CDS CBO0364 NC_009495.1 423432 424106 D Similar to Clostridium tetani ser/thr and tyr protein phosphatase ctc02044 SWALL:Q892P9 (EMBL:AE015943) (208 aa) fasta scores: E(): 6e-36, 43.35 38d in 203 aa; hypothetical protein 423432..424106 Clostridium botulinum A str. ATCC 3502 5184619 YP_001252909.1 CDS CBO0365 NC_009495.1 424052 424750 D Similar to Enterococcus faecium regulatory protein VanR vanR SWALL:VANR_ENTFC (SWALL:Q06239) (231 aa) fasta scores: E(): 2.2e-41, 51.94 38d in 231 aa; DNA-binding response regulator 424052..424750 Clostridium botulinum A str. ATCC 3502 5184620 YP_001252910.1 CDS CBO0366 NC_009495.1 424776 426254 D Similar to Enterococcus faecalis VansE SWALL:Q93A42 (EMBL:AF430807) (357 aa) fasta scores: E(): 1.1e-25,32.16 38d in 370 aa; sensor histidine kinase 424776..426254 Clostridium botulinum A str. ATCC 3502 5184621 YP_001252911.1 CDS CBO0367 NC_009495.1 426362 427777 D Similar to Escherichia coli sodium/pantothenate symporter PanF or b3258 SWALL:PANF_ECOLI (SWALL:P16256) (483 aa) fasta scores: E(): 1.3e-21, 24.83 38d in 451 aa; sodium:solute symporter family protein 426362..427777 Clostridium botulinum A str. ATCC 3502 5184622 YP_001252912.1 CDS rnfC NC_009495.1 429001 430320 D Similar to Rhodobacter capsulatus electron transport complex protein RnfC SWALL:RNFC_RHOCA (SWALL:Q52716) (519 aa) fasta scores: E(): 1.1e-57, 39.18 id in 444 aa; RnfABCDGE type electron transport complex subunit C 429001..430320 Clostridium botulinum A str. ATCC 3502 5184623 YP_001252913.1 CDS rnfD NC_009495.1 430343 431275 D Similar to Pseudomonas stutzeri electron transport complex protein RnfD SWALL:RNFD_PSEST (SWALL:Q9EVN4) (354 aa) fasta scores: E(): 1.1e-19, 38.29 38d in 329 aa; RnfABCDGE type electron transport complex subunit D 430343..431275 Clostridium botulinum A str. ATCC 3502 5187797 YP_001252914.1 CDS rnfG NC_009495.1 431275 431946 D Similar to Pseudomonas stutzeri electron transport complex protein RnfG SWALL:RNFG_PSEST (SWALL:Q9EVN3) (228 aa) fasta scores: E(): 5.1e-07, 30.15 38d in 189 aa; electron transport complex, RnfABCDGE type, G subunit 431275..431946 Clostridium botulinum A str. ATCC 3502 5184625 YP_001252915.1 CDS rnfE NC_009495.1 431960 432559 D in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex protein RsxE 431960..432559 Clostridium botulinum A str. ATCC 3502 5184626 YP_001252916.1 CDS rnfA NC_009495.1 432610 433188 D Similar to Escherichia coli, Escherichia coli O6,and Escherichia coli O157:H7 electron transport complex protein RnfA or b1627 or c2019 or z2633 or ecs2336 SWALL:RNFA_ECOLI (SWALL:P76181) (193 aa) fasta scores: E(): 2.5e-36, 55.91 38d in 186 aa; RnfABCDGE type electron transport complex subunit A 432610..433188 Clostridium botulinum A str. ATCC 3502 5184627 YP_001252917.1 CDS rnfB NC_009495.1 433202 434035 D involved in the electron transport chain; in Methanosarcina acetivorans this protein is part of a cluster involved in electron transfer during growth on acetate; ferredoxin 433202..434035 Clostridium botulinum A str. ATCC 3502 5184628 YP_001252918.1 CDS CBO0374 NC_009495.1 434381 435469 D Similar to the N-terminal region of Clostridium difficile Cwp66 SWALL:Q9FA27 (EMBL:AF093106) (610 aa) fasta scores: E(): 1.7e-14, 30.85 38d in 350 aa, and to Bacillus subtilis N-acetylmuramoyl-L-alanine amidase CwlB precursor LycT or cwlb or bsu35620 SWALL:CWLB_BACSU (SWALL:Q02114) (496 aa) fasta scores: E(): 4.4e-08, 29.64 id in 361 aa; amidase domain protein 434381..435469 Clostridium botulinum A str. ATCC 3502 5184629 YP_001252919.1 CDS CBO0375 NC_009495.1 435663 436199 R Similar to Clostridium tetani heptaprenyl diphosphate synthase component I ctc01025 SWALL:Q896H9 (EMBL:AE015939) (181 aa) fasta scores: E(): 2.6e-38,63.37 38d in 172 aa; hypothetical protein complement(435663..436199) Clostridium botulinum A str. ATCC 3502 5187887 YP_001252920.1 CDS CBO0376 NC_009495.1 436217 436609 R Similar to Clostridium tetani membrane associated protein ctc01026 SWALL:Q896H8 (EMBL:AE015939) (132 aa) fasta scores: E(): 1.8e-16, 43.28 38d in 134 aa; hypothetical protein complement(436217..436609) Clostridium botulinum A str. ATCC 3502 5184631 YP_001252921.1 CDS CBO0377 NC_009495.1 436724 437758 R Similar to Clostridium tetani thiamine biosynthesis lipoprotein apbe precursor ApbE or ctc01027 SWALL:Q896H7 (EMBL:AE015939) (342 aa) fasta scores: E(): 1.2e-63,53.48 38d in 344 aa; apbE family protein complement(436724..437758) Clostridium botulinum A str. ATCC 3502 5184632 YP_001252922.1 CDS CBO0378 NC_009495.1 438368 442561 D Similar to Bacillus sphaericus surface-layer 125 kDa protein precursor SWALL:SLAP_BACSH (SWALL:P38537) (1176 aa) fasta scores: E(): 2.3e-17, 25.3 38d in 1308 aa,and to Clostridium difficile Cwp66 cwp66 SWALL:Q9F9G7 (EMBL:AF194870) (610 aa) fasta scores: E(): 5.3e-16,25.59 38d in 547 aa; cell surface protein 438368..442561 Clostridium botulinum A str. ATCC 3502 5184633 YP_001252923.1 CDS CBO0379 NC_009495.1 443167 445236 D Similar to Bacillus subtilis N-acetylmuramoyl-L-alanine amidase cwlb precursor lytc or cwlb or bsu35620 SWALL:CWLB_BACSU (SWALL:Q02114) (496 aa) fasta scores: E(): 2.4e-29, 33.09 38d in 417 aa, and to Clostridium difficile Cwp66 cwp66 SWALL:Q9FA27 (EMBL:AF093106) (610 aa) fasta scores: E(): 1.1e-26,31.93 38d in 501 aa; cell surface protein 443167..445236 Clostridium botulinum A str. ATCC 3502 5184634 YP_001252924.1 CDS CBO0380 NC_009495.1 445871 450772 D Similar to Clostridium difficile Cwp66 SWALL:Q9F9G7 (EMBL:AF194870) (610 aa) fasta scores: E(): 1.4e-17,26.37 38d in 565 aa, and to Bacillus subtilis N-acetylmuramoyl-L-alanine amidase CwlB precursor lytc or cwlb or bsu35620 SWALL:CWLB_BACSU (SWALL:Q02114) (496 aa) fasta scores: E(): 5.8e-12, 27.72 38d in 339 aa; cell surface protein 445871..450772 Clostridium botulinum A str. ATCC 3502 5184635 YP_001252925.1 CDS CBO0381 NC_009495.1 450843 451277 R exported protein complement(450843..451277) Clostridium botulinum A str. ATCC 3502 5184636 YP_001252926.1 CDS CBO0382 NC_009495.1 451403 452434 R Similar to Staphylococcus caprae IcaC SWALL:Q9AIQ5 (EMBL:AF246927) (357 aa) fasta scores: E(): 6.4e-13,25.71 38d in 350 aa, and to Clostridium tetani membrane protein ctc00459 SWALL:Q898I8 (EMBL:AE015937) (348 aa) fasta scores: E(): 2.2e-44, 36.91 38d in 344 aa; acyltransferase complement(451403..452434) Clostridium botulinum A str. ATCC 3502 5184637 YP_001252927.1 CDS CBO0383 NC_009495.1 452865 454376 D Similar to Thermoanaerobacter tengcongensis hypothetical protein Tte1561 SWALL:Q8R9P4 (EMBL:AE013112) (355 aa) fasta scores: E(): 3.2e-20, 37.09 38d in 248 aa; exported protein 452865..454376 Clostridium botulinum A str. ATCC 3502 5187813 YP_001252928.1 CDS CBO0384 NC_009495.1 454773 455684 D Similar to Methanosarcina mazei phosphate-binding protein mm2005 SWALL:Q8PVG0 (EMBL:AE013439) (302 aa) fasta scores: E(): 2.8e-18, 30.16 38d in 305 aa; ABC transporter solute-binding protein 454773..455684 Clostridium botulinum A str. ATCC 3502 5184639 YP_001252929.1 CDS CBO0385 NC_009495.1 455879 456751 D Similar to Methanosarcina acetivorans phosphate ABC transporter permease pstc or ma0888 SWALL:Q8TSB0 (EMBL:AE010753) (296 aa) fasta scores: E(): 4.7e-33,36.26 38d in 284 aa; phosphate ABC transporter permease 455879..456751 Clostridium botulinum A str. ATCC 3502 5184640 YP_001252930.1 CDS CBO0386 NC_009495.1 456787 457617 D Similar to Vibrio parahaemolyticus phosphate ABC transporter permease vpa1459 SWALL:Q87G58 (EMBL:AP005089) (287 aa) fasta scores: E(): 3.4e-30,38.54 38d in 275 aa; ABC transporter permease 456787..457617 Clostridium botulinum A str. ATCC 3502 5187254 YP_001252931.1 CDS CBO0387 NC_009495.1 457619 458365 D Similar to Clostridium tetani phosphate import ATP-binding protein PstB or ctc01135 SWALL:Q895Y0 (EMBL:AE015939) (249 aa) fasta scores: E(): 1.8e-43,53.01 38d in 249 aa; ABC transporter ATP-binding protein 457619..458365 Clostridium botulinum A str. ATCC 3502 5184642 YP_001252932.1 CDS CBO0388 NC_009495.1 458491 458961 D Similar to Methanopyrus kandleri had family hydrolase, a mk0529 SWALL:Q8TXY0 (EMBL:AE010347) (158 aa) fasta scores: E(): 4.9e-13, 35.03 38d in 157 aa; hypothetical protein 458491..458961 Clostridium botulinum A str. ATCC 3502 5184643 YP_001252933.1 CDS CBO0389 NC_009495.1 459448 460899 D Similar to Oceanobacillus iheyensis cationic amino acid transporter ob0489 SWALL:Q8ESX7 (EMBL:AP004594) (469 aa) fasta scores: E(): 1.8e-96, 51.68 38d in 476 aa; amino acid permease 459448..460899 Clostridium botulinum A str. ATCC 3502 5184644 YP_001252934.1 CDS CBO0390 NC_009495.1 460965 461546 R Similar to Bacillus subtilis lipoprotein yhcn precursor yhcn or bsu09150 SWALL:YHCN_BACSU (SWALL:P54598) (189 aa) fasta scores: E(): 2e-08, 27.89 38d in 190 aa; forespore-specific lipoprotein complement(460965..461546) Clostridium botulinum A str. ATCC 3502 5184645 YP_001252935.1 CDS CBO0391 NC_009495.1 461735 462559 D Similar to Clostridium tetani protein ctc00525 SWALL:Q898D7 (EMBL:AE015937) (279 aa) fasta scores: E(): 5.4e-39, 47.6 38d in 250 aa; hypothetical protein 461735..462559 Clostridium botulinum A str. ATCC 3502 5184646 YP_001252936.1 CDS CBO0392 NC_009495.1 462637 463332 D Similar to Bacillus anthracis hypothetical protein ba0337 SWALL:Q81ZD2 (EMBL:AE017025) (235 aa) fasta scores: E(): 3e-22, 31.35 38d in 236 aa; hypothetical protein 462637..463332 Clostridium botulinum A str. ATCC 3502 5184647 YP_001252937.1 CDS CBO0393 NC_009495.1 463419 463757 D Similar to Clostridium acetobutylicum single-strand binding protein 1 Ssb1 or cac0945 SWALL:Q97KH4 (EMBL:AE007610) (110 aa) fasta scores: E(): 2.3e-17,47.66 38d in 107 aa; single-strand binding protein 463419..463757 Clostridium botulinum A str. ATCC 3502 5184648 YP_001252938.1 CDS CBO0394 NC_009495.1 464010 464561 D Similar to Clostridium acetobutylicum predicted membrane protein cac0950 SWALL:Q97KG9 (EMBL:AE007610) (183 aa) fasta scores: E(): 2.9e-32, 49.72 38d in 183 aa; hypothetical protein 464010..464561 Clostridium botulinum A str. ATCC 3502 5184649 YP_001252939.1 CDS CBO0395 NC_009495.1 464643 465059 D Similar to Campylobacter jejuni ferric uptake regulation protein Fur or cj0400 SWALL:FUR_CAMJE (SWALL:P48796) (157 aa) fasta scores: E(): 3.3e-08, 27.69 id in 130 aa, and to Bacillus subtilis peroxide operon regulator PerR or bsu08730 SWALL:PERR_BACSU (SWALL:P71086) (145 aa) fasta scores: E(): 4.8e-08, 30.76 38d in 130 aa; ferric uptake regulation protein 464643..465059 Clostridium botulinum A str. ATCC 3502 5184650 YP_001252940.1 CDS CBO0396 NC_009495.1 465056 465403 R Similar to Clostridium acetobutylicum hypothetical protein Cac0952 SWALL:Q97KG7 (EMBL:AE007610) (114 aa) fasta scores: E(): 1.3e-08, 32.99 38d in 97 aa; exported protein complement(465056..465403) Clostridium botulinum A str. ATCC 3502 5184651 YP_001252941.1 CDS CBO0397 NC_009495.1 465674 466732 D Similar to Clostridium tetani protein ctc00529 SWALL:Q898D3 (EMBL:AE015937) (357 aa) fasta scores: E(): 7.6e-85, 63.17 38d in 353 aa; metal dependent phosphohydrolase 465674..466732 Clostridium botulinum A str. ATCC 3502 5184652 YP_001252942.1 CDS CBO0398 NC_009495.1 466869 467882 D Similar to Clostridium tetani membrane protein ctc00530 SWALL:Q898D2 (EMBL:AE015937) (345 aa) fasta scores: E(): 3.5e-47, 48.22 38d in 338 aa; membrane associated peptidase 466869..467882 Clostridium botulinum A str. ATCC 3502 5184653 YP_001252943.1 CDS CBO0399 NC_009495.1 468193 470247 R Similar to Bacillus subtilis methyl-accepting chemotaxis protein TlpB or bsu31230 SWALL:TLPB_BACSU (SWALL:P39217) (662 aa) fasta scores: E(): 2.6e-40, 31.81 id in 682 aa; methyl-accepting chemotaxis protein complement(468193..470247) Clostridium botulinum A str. ATCC 3502 5184654 YP_001252944.1 CDS ftsH NC_009495.1 470844 472574 R Similar to Escherichia coli, and Shigella flexneri cell division protein FtsH hflb or ftsh or MrsC or TolZ or b3178 or sf3218 or s3436 SWALL:FTSH_ECOLI (SWALL:P28691) (644 aa) fasta scores: E(): 8.6e-61, 38.8 38d in 585 aa; cell division protein complement(470844..472574) Clostridium botulinum A str. ATCC 3502 5184655 YP_001252945.1 CDS CBO0401 NC_009495.1 472794 473849 D Similar to Clostridium perfringens hypothetical protein Cpe1451 SWALL:Q8XKE9 (EMBL:AP003190) (323 aa) fasta scores: E(): 1.4e-30, 32.08 38d in 321 aa; hypothetical protein 472794..473849 Clostridium botulinum A str. ATCC 3502 5184656 YP_001252946.1 CDS rnhA NC_009495.1 473824 474273 D An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 473824..474273 Clostridium botulinum A str. ATCC 3502 5184657 YP_001252947.1 CDS CBO0403 NC_009495.1 474336 474512 D Similar to Clostridium perfringens hypothetical protein Cpe1449 SWALL:Q8XKF1 (EMBL:AP003190) (53 aa) fasta scores: E(): 0.0001, 45.28 38d in 53 aa; hypothetical protein 474336..474512 Clostridium botulinum A str. ATCC 3502 5184658 YP_001252948.1 CDS CBO0404 NC_009495.1 474693 475997 D Similar to Bacillus stearothermophilus transcriptional activator NprA SWALL:NPRA_BACST (SWALL:P43130) (406 aa) fasta scores: E(): 5.8e-06, 19.61 id in 413 aa, and to Bacillus subtilis response regulator aspartate phosphatase A RapA or GsiaA or spo0l or bsu12430 SWALL:RAPA_BACSU (SWALL:Q00828) (378 aa) fasta scores: E(): 0.0019, 21.46 38d in 368 aa; tetratricopeptide repeat/DNA binding domain-containing protein 474693..475997 Clostridium botulinum A str. ATCC 3502 5184659 YP_001252949.1 CDS CBO0405 NC_009495.1 476029 477282 D Similar to Bacillus thuringiensis transcriptional activator NprR nprR SWALL:Q9AQ53 (EMBL:AF220563) (425 aa) fasta scores: E(): 0.00056, 21.33 38d in 436 aa, and to Bacillus subtilis response regulator aspartate phosphatase B RapB or SpoOP or bsu36690 SWALL:RAPB_BACSU (SWALL:P70962) (377 aa) fasta scores: E(): 0.014, 20.15 id in 377 aa; tetratricopeptide repeat protein 476029..477282 Clostridium botulinum A str. ATCC 3502 5184660 YP_001252950.1 CDS CBO0406 NC_009495.1 477596 477733 D hypothetical protein 477596..477733 Clostridium botulinum A str. ATCC 3502 5187559 YP_001252951.1 CDS CBO0407 NC_009495.1 477764 478369 D Similar to Pseudomonas putida isonitrile hydratase InhA SWALL:Q8G9F9 (EMBL:AB088117) (228 aa) fasta scores: E(): 1.4e-14, 30.27 38d in 185 aa, and to Pseudomonas aurantiaca DarS SWALL:Q84H27 (EMBL:AY135187) (228 aa) fasta scores: E(): 1.5e-13, 29.03 38d in 186 aa; DJ-1/PfpI family protein 477764..478369 Clostridium botulinum A str. ATCC 3502 5184662 YP_001252952.1 CDS CBO0408 NC_009495.1 478574 479500 D Similar to Clostridium tetani protein ctc02189 SWALL:Q892B6 (EMBL:AE015943) (314 aa) fasta scores: E(): 1.3e-78, 69.8 38d in 308 aa; hypothetical protein 478574..479500 Clostridium botulinum A str. ATCC 3502 5184663 YP_001252953.1 CDS clpB NC_009495.1 479864 482464 D Similar to Escherichia coli, Escherichia coli O6,and Escherichia coli O157:H7 ClpB protein ClpB or HtpM or b2592 or c3114 or z3886 or ecs3455 SWALL:CLPB_ECOLI (SWALL:P03815) (857 aa) fasta scores: E(): 5.3e-137,51.74 38d in 862 aa, and to Synechococcus sp. ClpB protein clpB SWALL:CLPB_SYNP7 (SWALL:P53533) (883 aa) fasta scores: E(): 6.9e-152, 58.66 38d in 866 aa; ClpA-type chaperone 479864..482464 Clostridium botulinum A str. ATCC 3502 5184664 YP_001252954.1 CDS CBO0410 NC_009495.1 482810 483538 R Similar to Clostridium acetobutylicum cobyric acid synthase CobQ cac0961 SWALL:Q97KF8 (EMBL:AE007611) (243 aa) fasta scores: E(): 8.8e-72, 77.08 38d in 240 aa; CobB/CobQ family glutamine amidotransferase complement(482810..483538) Clostridium botulinum A str. ATCC 3502 5187615 YP_001252955.1 CDS CBO0411 NC_009495.1 483596 484957 R Similar to Clostridium acetobutylicum udp-N-acetylmuramyl tripeptide synthetase cac0962 SWALL:Q97KF7 (EMBL:AE007611) (435 aa) fasta scores: E(): 2.2e-112, 64.76 38d in 437 aa; UDP-N-acetylmuramyl tripeptide synthetase-like protein complement(483596..484957) Clostridium botulinum A str. ATCC 3502 5184666 YP_001252956.1 CDS CBO0412 NC_009495.1 485222 486202 D Similar to Streptococcus mutans mannose-6-phosphate isomerase Pmi or ManA or smu.1839 SWALL:MANA_STRMU (SWALL:Q59935) (316 aa) fasta scores: E(): 1.1e-29, 35.25 id in 312 aa; mannose-6-phosphate isomerase 485222..486202 Clostridium botulinum A str. ATCC 3502 5184667 YP_001252957.1 CDS CBO0413 NC_009495.1 486551 487666 D Similar to Clostridium tetani protein ctc00544 SWALL:Q898B9 (EMBL:AE015937) (381 aa) fasta scores: E(): 8.2e-56, 44.75 38d in 362 aa; lipoprotein 486551..487666 Clostridium botulinum A str. ATCC 3502 5184668 YP_001252958.1 CDS upk2 NC_009495.1 487774 488628 D phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters UDP disphosphate which reduces the pool of lipid carrier available to the cell; UDP pyrophosphate phosphatase 487774..488628 Clostridium botulinum A str. ATCC 3502 5184669 YP_001252959.1 CDS CBO0415 NC_009495.1 494523 495386 R Similar to Clostridium tetani come-like protein,metallo beta-lactamase superfamily hydrolase ctc00821 SWALL:Q897B9 (EMBL:AE015938) (304 aa) fasta scores: E(): 6.5e-49, 48.95 38d in 288 aa; metallo beta-lactamase superfamily lipoprotein complement(494523..495386) Clostridium botulinum A str. ATCC 3502 5184670 YP_001252960.1 CDS CBO0416 NC_009495.1 495523 496245 D Similar to Escherichia coli 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC or ParF or b3018 SWALL:PLSC_ECOLI (SWALL:P26647) (245 aa) fasta scores: E(): 1.9e-09, 28.8 38d in 184 aa, and to Clostridium tetani 1-acyl-sn-glycerol-3-phosphate acyltransferase ctc00551 SWALL:Q898B3 (EMBL:AE015937) (242 aa) fasta scores: E(): 3.9e-41, 45.57 38d in 237 aa; 1-acyl-sn-glycerol-3-phosphate acyltransferase 495523..496245 Clostridium botulinum A str. ATCC 3502 5184671 YP_001252961.1 CDS CBO0417 NC_009495.1 496993 498351 D Similar to Streptomyces hygroscopicus 2-phosphinomethylmalic acid synthase PmmS SWALL:Q9LCB4 (EMBL:AB029822) (440 aa) fasta scores: E(): 3.5e-55,38.53 38d in 436 aa, and to Salmonella typhimurium 2-isopropylmalate synthase LeuA or stm0113 SWALL:LEU1_SALTY (SWALL:P15875) (522 aa) fasta scores: E(): 7.1e-10, 25.91 38d in 355 aa; HMGL-related enzyme 496993..498351 Clostridium botulinum A str. ATCC 3502 5184672 YP_001252962.1 CDS CBO0418 NC_009495.1 498495 500420 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 498495..500420 Clostridium botulinum A str. ATCC 3502 5187174 YP_001252963.1 CDS CBO0419 NC_009495.1 500453 501454 D Similar to Coccidioides immitis isocitrate dehydrogenase IcdH SWALL:Q8X1D0 (EMBL:AF439265) (347 aa) fasta scores: E(): 2e-58, 51.35 38d in 333 aa; isocitrate/isopropylmalate family dehydrogenase 500453..501454 Clostridium botulinum A str. ATCC 3502 5184674 YP_001252964.1 CDS CBO0420 NC_009495.1 501763 502488 D Similar to Bacillus subtilis glutamine ABC transporter GlnQ SWALL:O34677 (EMBL:Z99117) (242 aa) fasta scores: E(): 4.9e-46, 56.84 38d in 241 aa, and to Corynebacterium glutamicum glutamate transport ATP-binding protein GluA or cgl1950 SWALL:GLUA_CORGL (SWALL:P48243) (242 aa) fasta scores: E(): 2.1e-43, 56.01 38d in 241 aa; polar amino acid ABC transporter ATP-binding protein 501763..502488 Clostridium botulinum A str. ATCC 3502 5184675 YP_001252965.1 CDS CBO0421 NC_009495.1 503006 504772 D Similar to Clostridium tetani na+/h+ antiporter ctc00567 SWALL:Q898A2 (EMBL:AE015937) (586 aa) fasta scores: E(): 2.1e-158, 70.1 38d in 572 aa; Na+/H+ antiporter family protein 503006..504772 Clostridium botulinum A str. ATCC 3502 5187536 YP_001252966.1 CDS CBO0422 NC_009495.1 504799 505014 R Similar to Clostridium acetobutylicum uncharacterized protein, ortholog yuza b.subtilis cac0976 SWALL:Q97KE3 (EMBL:AE007613) (69 aa) fasta scores: E(): 7.5e-19, 79.68 38d in 64 aa; hypothetical protein complement(504799..505014) Clostridium botulinum A str. ATCC 3502 5184677 YP_001252967.1 CDS panD NC_009495.1 505102 505485 R Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase complement(505102..505485) Clostridium botulinum A str. ATCC 3502 5184678 YP_001252968.1 CDS panC NC_009495.1 505634 506479 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(505634..506479) Clostridium botulinum A str. ATCC 3502 5184679 YP_001252969.1 CDS panB NC_009495.1 506533 507360 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(506533..507360) Clostridium botulinum A str. ATCC 3502 5184680 YP_001252970.1 CDS addB NC_009495.1 508161 511613 D Similar to Bacillus subtilis ATP-dependent nuclease subunit B AddB or bsu10620 SWALL:ADDB_BACSU (SWALL:P23477) (1166 aa) fasta scores: E(): 5.1e-92, 34.47 38d in 1166 aa; ATP-dependent nuclease subunit B 508161..511613 Clostridium botulinum A str. ATCC 3502 5184681 YP_001252971.1 CDS CBO0427 NC_009495.1 511827 512213 R hypothetical protein complement(511827..512213) Clostridium botulinum A str. ATCC 3502 5187633 YP_001252972.1 CDS CBO0428 NC_009495.1 512520 513170 D Similar to Clostridium tetani hypothetical protein ctc01031 SWALL:Q896H3 (EMBL:AE015939) (222 aa) fasta scores: E(): 1.8e-19, 37.44 38d in 211 aa; tetratricopeptide repeat protein 512520..513170 Clostridium botulinum A str. ATCC 3502 5184683 YP_001252973.1 CDS CBO0429 NC_009495.1 513173 513859 D Similar to Clostridium tetani protein ctc01032 SWALL:Q896H2 (EMBL:AE015939) (235 aa) fasta scores: E(): 1.1e-41, 50.67 38d in 223 aa; hypothetical protein 513173..513859 Clostridium botulinum A str. ATCC 3502 5184684 YP_001252974.1 CDS CBO0430 NC_009495.1 514108 514716 R Similar to Bacteroides thetaiotaomicron transcriptional regulator bt0507 SWALL:Q8AAF8 (EMBL:AE016928) (202 aa) fasta scores: E(): 9.5e-06,26.31 38d in 190 aa; TetR family transcriptional regulator complement(514108..514716) Clostridium botulinum A str. ATCC 3502 5184685 YP_001252975.1 CDS hypB NC_009495.1 514961 515632 D Similar to Escherichia coli, and Escherichia coli O6 hydrogenase isoenzymes nickel incorporation protein HypB or b2727 or c3287 SWALL:HYPB_ECOLI (SWALL:P24190) (290 aa) fasta scores: E(): 3e-28, 40.74 38d in 216 aa; hydrogenase nickel incorporation protein HypB 514961..515632 Clostridium botulinum A str. ATCC 3502 5184686 YP_001252976.1 CDS CBO0432 NC_009495.1 515868 518546 D Similar to Moorella thermoacetica formate dehydrogenase beta subunit fdhB SWALL:P77907 (EMBL:U73807) (707 aa) fasta scores: E(): 5.5e-36, 34.26 38d in 502 aa; pyridine nucleotide-disulfide oxidoreductase 515868..518546 Clostridium botulinum A str. ATCC 3502 5184687 YP_001252977.1 CDS hypA NC_009495.1 518599 518943 D Similar to Bradyrhizobium japonicum hydrogenase nickel incorporation protein HypA or bll6932 SWALL:HYPA_BRAJA (SWALL:Q45256) (113 aa) fasta scores: E(): 6.6e-08, 30 38d in 110 aa; hydrogenase nickel incorporation protein HypA 518599..518943 Clostridium botulinum A str. ATCC 3502 5184688 YP_001252978.1 CDS CBO0434 NC_009495.1 518982 519968 D hypothetical protein 518982..519968 Clostridium botulinum A str. ATCC 3502 5184689 YP_001252979.1 CDS CBO0435 NC_009495.1 520142 520630 R Similar to Carsonella ruddii alkyl hydroperoxide reductase small subunit AhpC SWALL:Q9AIY8 (EMBL:AF211135) (177 aa) fasta scores: E(): 7.1, 27.32 38d in 161 aa; hypothetical protein complement(520142..520630) Clostridium botulinum A str. ATCC 3502 5184690 YP_001252980.1 CDS addA NC_009495.1 521001 524840 D Similar to Bacillus subtilis ATP-dependent nuclease subunit A AddA or bsu10630 SWALL:ADDA_BACSU (SWALL:P23478) (1232 aa) fasta scores: E(): 1.2e-58, 38.82 38d in 1288 aa; recombination helicase AddA 521001..524840 Clostridium botulinum A str. ATCC 3502 5184691 YP_001252981.1 CDS CBO0437 NC_009495.1 524980 526671 D Similar to Bacillus subtilis methyl-accepting chemotaxis protein TlpC or bsu03440 SWALL:TLPC_BACSU (SWALL:P39209) (573 aa) fasta scores: E(): 1.6e-22, 32.24 id in 397 aa; methyl-accepting chemotaxis protein 524980..526671 Clostridium botulinum A str. ATCC 3502 5184692 YP_001252982.1 CDS pepT NC_009495.1 526748 527974 D catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 526748..527974 Clostridium botulinum A str. ATCC 3502 5184693 YP_001252983.1 CDS CBO0439 NC_009495.1 528249 529181 R Similar to Bacillus cereus hypothetical membrane spanning protein bc1989 SWALL:Q813P5 (EMBL:AE017004) (321 aa) fasta scores: E(): 6e-42, 41.23 38d in 308 aa; phospholipase complement(528249..529181) Clostridium botulinum A str. ATCC 3502 5184694 YP_001252984.1 CDS CBO0440 NC_009495.1 529221 529379 R hypothetical protein complement(529221..529379) Clostridium botulinum A str. ATCC 3502 5184695 YP_001252985.1 CDS CBO0441 NC_009495.1 529483 529611 D hypothetical protein 529483..529611 Clostridium botulinum A str. ATCC 3502 5184696 YP_001252986.1 CDS CBO0442 NC_009495.1 529753 530469 D Similar to Bacillus anthracis metallo-beta-lactamase ba2399 SWALL:Q81QM5 (EMBL:AE017031) (288 aa) fasta scores: E(): 3.5e-34,40.43 38d in 230 aa; metallo-beta-lactamase 529753..530469 Clostridium botulinum A str. ATCC 3502 5184697 YP_001252987.1 CDS CBO0443 NC_009495.1 530675 531148 D Similar to Methanosarcina mazei protein mm1395 SWALL:Q8PX27 (EMBL:AE013374) (154 aa) fasta scores: E(): 8e-25, 48.36 38d in 153 aa; hypothetical protein 530675..531148 Clostridium botulinum A str. ATCC 3502 5184698 YP_001252988.1 CDS CBO0444 NC_009495.1 531549 532970 D Similar to Bacillus subtilis N-acetylmuramoyl-L-alanine amidase cwlb precursor LytC or CwlB or bsu35620 SWALL:CWLB_BACSU (SWALL:Q02114) (496 aa) fasta scores: E(): 1.9e-30, 32.7 38d in 318 aa; N-acetylmuramoyl-L-alanine amidase-like protein 531549..532970 Clostridium botulinum A str. ATCC 3502 5184699 YP_001252989.1 CDS CBO0445 NC_009495.1 533178 533813 R Similar to Listeria innocua hypothetical protein Lin1851 lin1851 SWALL:Q92AR8 (EMBL:AL596170) (213 aa) fasta scores: E(): 2.2e-40, 51.65 38d in 211 aa; amino acid ABC transporter permease complement(533178..533813) Clostridium botulinum A str. ATCC 3502 5184700 YP_001252990.1 CDS CBO0446 NC_009495.1 533826 534629 R Similar to Escherichia coli, and Escherichia coli O6 cystine-binding periplasmic protein precursor FliY or b1920 or c2335 SWALL:FLIY_ECOLI (SWALL:P39174) (266 aa) fasta scores: E(): 5.9e-25, 33.84 38d in 260 aa; polar amino acid ABC transporter amino acid-binding protein complement(533826..534629) Clostridium botulinum A str. ATCC 3502 5184701 YP_001252991.1 CDS CBO0447 NC_009495.1 534850 535578 D Similar to Thermoanaerobacter tengcongensis sam-dependent methyltransferases smta5 or tte2398 SWALL:Q8R7K7 (EMBL:AE013182) (222 aa) fasta scores: E(): 0.0023, 25.22 38d in 218 aa; hypothetical protein 534850..535578 Clostridium botulinum A str. ATCC 3502 5184702 YP_001252992.1 CDS CBO0448 NC_009495.1 535927 537138 R Similar to Bacillus subtilis hypothetical protein yuxh or bsu31740 SWALL:YUXH_BACSU (SWALL:P14203) (409 aa) fasta scores: E(): 1.1e-47, 40.04 38d in 412 aa; diguanylate phosphodiesterase complement(535927..537138) Clostridium botulinum A str. ATCC 3502 5184703 YP_001252993.1 CDS thiE NC_009495.1 537404 538021 R Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase complement(537404..538021) Clostridium botulinum A str. ATCC 3502 5184704 YP_001252994.1 CDS thiK NC_009495.1 538012 538803 R Similar to Bacillus subtilis hydroxyethylthiazole kinase ThiM or ThiK or ipa-25d or bsu38300 SWALL:THIM_BACSU (SWALL:P39593) (272 aa) fasta scores: E(): 7.5e-30, 38.82 38d in 255 aa; hydroxyethylthiazole kinase complement(538012..538803) Clostridium botulinum A str. ATCC 3502 5184705 YP_001252995.1 CDS thiD1 NC_009495.1 539035 539835 R This CDS is also similar to CBO0771 (52.308 identity in 260 aa overlap); phosphomethylpyrimidine kinase complement(539035..539835) Clostridium botulinum A str. ATCC 3502 5184706 YP_001252996.1 CDS ddl NC_009495.1 540847 541749 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 540847..541749 Clostridium botulinum A str. ATCC 3502 5184707 YP_001252997.1 CDS CBO0453 NC_009495.1 541905 543047 D Similar to Pseudomonas aeruginosa leucine-,isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC or pa1074 SWALL:BRAC_PSEAE (SWALL:P21175) (373 aa) fasta scores: E(): 3.9e-25, 29.36 id in 378 aa; high-affinity branched-chain amino acid ABC transporter amino acid-binding protein 541905..543047 Clostridium botulinum A str. ATCC 3502 5184708 YP_001252998.1 CDS CBO0454 NC_009495.1 543051 543923 D Similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport system permease brad brad or pa1073 SWALL:BRAD_PSEAE (SWALL:P21627) (307 aa) fasta scores: E(): 5.6e-23, 37 38d in 300 aa; high-affinity branched-chain amino acid ABC transporter permease 543051..543923 Clostridium botulinum A str. ATCC 3502 5184709 YP_001252999.1 CDS CBO0455 NC_009495.1 543924 544868 D Similar to Bifidobacterium longum permease of ABC transporter for branched-chain amino acids bl1716 SWALL:Q8G3P1 (EMBL:AE014805) (358 aa) fasta scores: E(): 1.7e-36, 41.1 38d in 309 aa; high-affinity branched-chain amino acid ABC transporter permease 543924..544868 Clostridium botulinum A str. ATCC 3502 5184710 YP_001253000.1 CDS CBO0456 NC_009495.1 544880 545617 D Similar to Bordetella bronchiseptica ABC transport system ATP-binding protein bb0369 SWALL:CAE30867 (EMBL:BX640438) (244 aa) fasta scores: E(): 2e-32, 42.43 id in 238 aa; high-affinity branched chain amino acid ABC transporter ATP-binding protein 544880..545617 Clostridium botulinum A str. ATCC 3502 5184711 YP_001253001.1 CDS CBO0457 NC_009495.1 545619 546320 D Similar to Salmonella typhimurium, and Salmonella typhi high-affinity branched-chain amino acid transport ATP-binding protein LivF or LivG or stm3560 or sty4252 or t3962 SWALL:LIVF_SALTY (SWALL:P30294) (237 aa) fasta scores: E(): 5.5e-34, 44.87 38d in 234 aa; high-affinity branched chain amino acid ABC transporter ATP-binding protein 545619..546320 Clostridium botulinum A str. ATCC 3502 5184712 YP_001253002.1 CDS CBO0458 NC_009495.1 546349 547125 D Similar to Methanobacterium thermoautotrophicum protein mth526 SWALL:O26626 (EMBL:AE000835) (228 aa) fasta scores: E(): 1.6e-15, 32.33 38d in 201 aa; hypothetical protein 546349..547125 Clostridium botulinum A str. ATCC 3502 5184713 YP_001253003.1 CDS CBO0459 NC_009495.1 547527 548285 D Similar to Clostridium perfringens hypothetical protein Cpe1930 SWALL:Q8XJ31 (EMBL:AP003192) (256 aa) fasta scores: E(): 6.5e-24, 34.79 38d in 250 aa; hypothetical protein 547527..548285 Clostridium botulinum A str. ATCC 3502 5187055 YP_001253004.1 CDS CBO0460 NC_009495.1 548279 548722 D Similar to Staphylococcus aureus hypothetical protein sav0744 or sa0699 or mw0706 SWALL:Q99VN0 (EMBL:AP003360) (164 aa) fasta scores: E(): 2.8e-14,36.29 38d in 135 aa; hypothetical protein 548279..548722 Clostridium botulinum A str. ATCC 3502 5184715 YP_001253005.1 CDS CBO0461 NC_009495.1 548864 550315 D Similar to Clostridium tetani transcriptional regulatory protein ctc00684 SWALL:Q897P7 (EMBL:AE015938) (481 aa) fasta scores: E(): 5.3e-110, 62 38d in 479 aa; GntR family transcriptional regulator 548864..550315 Clostridium botulinum A str. ATCC 3502 5184716 YP_001253006.1 CDS CBO0462 NC_009495.1 550376 550945 D Similar to Clostridium tetani lema-like protein LemA or ctc00358 SWALL:Q898T4 (EMBL:AE015937) (191 aa) fasta scores: E(): 3.8e-39, 59.57 38d in 188 aa; hypothetical protein 550376..550945 Clostridium botulinum A str. ATCC 3502 5184717 YP_001253007.1 CDS CBO0463 NC_009495.1 550955 551791 D Similar to Clostridium tetani protein ctc00359 SWALL:Q898T3 (EMBL:AE015937) (273 aa) fasta scores: E(): 1.1e-32, 47.1 38d in 276 aa; hypothetical protein 550955..551791 Clostridium botulinum A str. ATCC 3502 5184718 YP_001253008.1 CDS CBO0464 NC_009495.1 552310 553170 D Similar to Clostridium tetani protein ctc00359 SWALL:Q898T3 (EMBL:AE015937) (273 aa) fasta scores: E(): 3.6e-39, 52.55 38d in 274 aa; hypothetical protein 552310..553170 Clostridium botulinum A str. ATCC 3502 5184719 YP_001253009.1 CDS CBO0465 NC_009495.1 553444 554337 D Similar to Bacillus anthracis mutt/nudix family protein ba3685 SWALL:Q81Y72 (EMBL:AE017035) (147 aa) fasta scores: E(): 1.4e-06, 35.29 38d in 136 aa; hydrolase, NUDIX family 553444..554337 Clostridium botulinum A str. ATCC 3502 5184720 YP_001253010.1 CDS CBO0466 NC_009495.1 554471 554953 D Similar to Clostridium perfringens hypothetical protein Cpe0713 SWALL:Q8XMH6 (EMBL:AP003187) (154 aa) fasta scores: E(): 3, 21.93 38d in 155 aa; hypothetical protein 554471..554953 Clostridium botulinum A str. ATCC 3502 5184721 YP_001253011.1 CDS CBO0467 NC_009495.1 555129 555653 D Similar to Thermotoga maritima hypothetical protein Tm0858 SWALL:Q9WZW2 (EMBL:AE001752) (168 aa) fasta scores: E(): 9.9e-15, 35.4 38d in 161 aa; hypothetical protein 555129..555653 Clostridium botulinum A str. ATCC 3502 5184722 YP_001253012.1 CDS CBO0468 NC_009495.1 555655 556245 D Similar to Thermoplasma volcanium hypothetical protein tv0916 tv0916 or tvg0944468 SWALL:Q97A94 (EMBL:AP000994) (245 aa) fasta scores: E(): 1.5e-05,27.95 38d in 186 aa, and to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri ubiquinone/menaquinone biosynthesis methyltransferase ubie ubie or b3833 or z5355 or ecs4763 or sf3911 or s3843 SWALL:UBIE_ECOLI (SWALL:P27851) (251 aa) fasta scores: E(): 1.6e-05, 30 38d in 170 aa; AraC family transcriptional regulator 555655..556245 Clostridium botulinum A str. ATCC 3502 5184723 YP_001253013.1 CDS CBO0469 NC_009495.1 556331 556570 R Similar to Bacillus cereus transcriptional regulator, cro/ci family bc2181 SWALL:Q81E15 (EMBL:AE017005) (75 aa) fasta scores: E(): 1.6e-16, 73.52 id in 68 aa; hypothetical protein complement(556331..556570) Clostridium botulinum A str. ATCC 3502 5184724 YP_001253014.1 CDS CBO0470 NC_009495.1 556591 557073 R Similar to Bacillus cereus hypothetical membrane spanning protein bc2987 SWALL:Q813G4 (EMBL:AE017007) (160 aa) fasta scores: E(): 0.00041, 30 38d in 170 aa; hypothetical protein complement(556591..557073) Clostridium botulinum A str. ATCC 3502 5184725 YP_001253015.1 CDS CBO0471 NC_009495.1 557308 557442 D hypothetical protein 557308..557442 Clostridium botulinum A str. ATCC 3502 5184726 YP_001253016.1 CDS sbcD NC_009495.1 557819 559048 D Similar to Escherichia coli, and Escherichia coli O157:H7 nuclease sbccd subunit d sbcd or b0398 or z0496 or ecs0448 SWALL:SBCD_ECOLI (SWALL:P13457) (400 aa) fasta scores: E(): 4.8e-08, 27.7 38d in 397 aa, and to Bacillus subtilis exonuclease sbcd homolog sbcd or bsu10640 SWALL:SBCD_BACSU (SWALL:P23479) (391 aa) fasta scores: E(): 2.5e-17, 39.9 38d in 406 aa; nuclease SbcCD subunit D 557819..559048 Clostridium botulinum A str. ATCC 3502 5184727 YP_001253017.1 CDS sbcC NC_009495.1 559023 562553 D Similar to Escherichia coli exonuclease sbcc sbcc or rmua or b0397 SWALL:SBCC_ECOLI (SWALL:P13458) (1048 aa) fasta scores: E(): 8.6e-10, 21.48 38d in 1210 aa; exonuclease SbcC 559023..562553 Clostridium botulinum A str. ATCC 3502 5184728 YP_001253018.1 CDS CBO0474 NC_009495.1 562581 563129 D Similar to Bacillus subtilis ADP-ribose pyrophosphatase nudf or bsu23610 SWALL:ADPP_BACSU (SWALL:P54570) (185 aa) fasta scores: E(): 0.00014, 27.54 id in 167 aa, and to Homo sapiens ADP-sugar pyrophosphatase ysa1h nudt5 SWALL:NUD5_HUMAN (SWALL:Q9UKK9) (219 aa) fasta scores: E(): 2.2e-13, 35.91 id in 181 aa; hydrolase, NUDIX family 562581..563129 Clostridium botulinum A str. ATCC 3502 5184729 YP_001253019.1 CDS CBO0475 NC_009495.1 563940 564791 D Similar to Clostridium tetani transporter ctc01333 SWALL:Q895E3 (EMBL:AE015940) (289 aa) fasta scores: E(): 6.5e-43, 38.21 38d in 280 aa; hypothetical protein 563940..564791 Clostridium botulinum A str. ATCC 3502 5184730 YP_001253020.1 CDS CBO0476 NC_009495.1 564883 565044 R Similar to Clostridium acetobutylicum hypothetical protein Cac3540 SWALL:Q97DD8 (EMBL:AE007850) (53 aa) fasta scores: E(): 1.8e-13, 60 38d in 50 aa; hypothetical protein complement(564883..565044) Clostridium botulinum A str. ATCC 3502 5184731 YP_001253021.1 CDS CBO0477 NC_009495.1 565256 565621 D Similar to Synechocystis sp. transcriptional repressor smtb homolog smtb or ziar or sll0792 SWALL:SMTB_SYNY3 (SWALL:Q55940) (132 aa) fasta scores: E(): 7.6e-17, 37.06 38d in 116 aa; transcription regulator ArsR 565256..565621 Clostridium botulinum A str. ATCC 3502 5184732 YP_001253022.1 CDS CBO0478 NC_009495.1 565697 567925 D Similar to Synechocystis sp. zinc-transporting ATPase ZiaA or slr0798 SWALL:ATZN_SYNY3 (SWALL:Q59998) (721 aa) fasta scores: E(): 7.1e-108, 44.69 38d in 745 aa,and to Helicobacter pylori cadmium, zinc and cobalt transporting ATPase CadA or hp0791 SWALL:HMCT_HELPY (SWALL:Q59465) (686 aa) fasta scores: E(): 8.6e-88, 39.43 id in 738 aa; cadmium-translocating P-type ATPase 565697..567925 Clostridium botulinum A str. ATCC 3502 5184733 YP_001253023.1 CDS CBO0479A NC_009495.1 568746 568954 D prophage protein (partial) join(568746..568841,568859..568954) Clostridium botulinum A str. ATCC 3502 5204256 YP_001253024.1 CDS CBO0480 NC_009495.1 569663 570010 D Similar to Clostridium acetobutylicum hypothetical protein Cac1923 SWALL:Q97HT4 (EMBL:AE007698) (110 aa) fasta scores: E(): 0.00019, 36.27 38d in 102 aa; hypothetical protein 569663..570010 Clostridium botulinum A str. ATCC 3502 5187092 YP_001253025.1 CDS CBO0481 NC_009495.1 570029 570178 R Similar to Clostridium perfringens hypothetical protein Cpe0253 cpe0253 SWALL:Q8XNS9 (EMBL:AP003186) (67 aa) fasta scores: E(): 0.0044, 76.92 38d in 26 aa; hypothetical protein complement(570029..570178) Clostridium botulinum A str. ATCC 3502 5184736 YP_001253026.1 CDS CBO0482 NC_009495.1 570696 571505 D Similar to Bacillus halodurans hypothetical protein Bh1562 SWALL:Q9KCK9 (EMBL:AP001512) (268 aa) fasta scores: E(): 4.7e-46, 45.14 38d in 268 aa; hypothetical protein 570696..571505 Clostridium botulinum A str. ATCC 3502 5187164 YP_001253027.1 CDS CBO0483 NC_009495.1 572462 573838 D Similar to Clostridium perfringens probable phosphate starvation inducible protein cpe1665 SWALL:Q8XJT8 (EMBL:AP003191) (459 aa) fasta scores: E(): 2.2e-118, 69.71 38d in 459 aa; PhoH family protein 572462..573838 Clostridium botulinum A str. ATCC 3502 5184738 YP_001253028.1 CDS CBO0484 NC_009495.1 574106 575110 D Similar to Clostridium tetani protein ctc00791 SWALL:Q897E9 (EMBL:AE015938) (335 aa) fasta scores: E(): 1.1e-77, 64.47 38d in 335 aa; exported protein 574106..575110 Clostridium botulinum A str. ATCC 3502 5184739 YP_001253029.1 CDS CBO0485 NC_009495.1 575120 576136 D Similar to Clostridium tetani protein ctc00792 SWALL:Q897E8 (EMBL:AE015938) (343 aa) fasta scores: E(): 1e-48, 40.81 38d in 343 aa; hypothetical protein 575120..576136 Clostridium botulinum A str. ATCC 3502 5184740 YP_001253030.1 CDS SagA NC_009495.1 576447 576629 D Similar to Streptococcus iniae bacteriocin-like prepropeptide SagA SWALL:Q8GP18 (EMBL:AF465842) (54 aa) fasta scores: E(): 6.2e-06, 50 38d in 52 aa, and to Streptococcus pyogenes, Streptococcus pyogenes streptolysin S associated protein SagA or spy0738 or spym18_0799 or spym3_0480 or sps1374 SWALL:O69194 (EMBL:AF067723) (53 aa) fasta scores: E(): 0.00037, 42 38d in 50 aa; hypothetical protein 576447..576629 Clostridium botulinum A str. ATCC 3502 5184741 YP_001253031.1 CDS SagB NC_009495.1 576794 577750 D Similar to Streptococcus equisimilis SagB SWALL:Q93SL4 (EMBL:AY033399) (316 aa) fasta scores: E(): 5.8e-45, 44.17 38d in 292 aa; streptolysin associated protein SagB 576794..577750 Clostridium botulinum A str. ATCC 3502 5184742 YP_001253032.1 CDS sagC NC_009495.1 577754 578836 D Similar to Streptococcus iniae SagC SWALL:Q8GP16 (EMBL:AF465842) (354 aa) fasta scores: E(): 2.6e-38,36.33 38d in 355 aa; streptolysin associated protein SagC 577754..578836 Clostridium botulinum A str. ATCC 3502 5184743 YP_001253033.1 CDS sagD NC_009495.1 578852 580210 D Similar to Streptococcus iniae SagD sagD SWALL:Q8GP15 (EMBL:AF465842) (453 aa) fasta scores: E(): 9.8e-91, 51.54 38d in 454 aa; streptolysin associated protein SagD 578852..580210 Clostridium botulinum A str. ATCC 3502 5184744 YP_001253034.1 CDS sagE NC_009495.1 580185 580823 D Similar to Streptococcus iniae SagE SWALL:Q8GP14 (EMBL:AF465842) (220 aa) fasta scores: E(): 1.9e-18,32.05 38d in 209 aa; CAAX amino terminal protease 580185..580823 Clostridium botulinum A str. ATCC 3502 5184745 YP_001253035.1 CDS sagF NC_009495.1 580831 581559 D Similar to Streptococcus iniae SagF SWALL:Q8GP13 (EMBL:AF465842) (229 aa) fasta scores: E(): 0.15, 26 38d in 150 aa; hypothetical protein 580831..581559 Clostridium botulinum A str. ATCC 3502 5184746 YP_001253036.1 CDS sagG NC_009495.1 581868 582800 D Similar to Streptococcus iniae SagG SWALL:Q8GP12 (EMBL:AF465842) (307 aa) fasta scores: E(): 2.7e-49,50.47 38d in 313 aa; ABC transporter ATP-binding protein 581868..582800 Clostridium botulinum A str. ATCC 3502 5184747 YP_001253037.1 CDS sagH NC_009495.1 582803 583936 D Similar to Streptococcus iniae SagH sagH SWALL:Q8GP11 (EMBL:AF465842) (375 aa) fasta scores: E(): 1e-37, 30.58 38d in 376 aa; ABC transporter permease/ATP-binding protein 582803..583936 Clostridium botulinum A str. ATCC 3502 5184748 YP_001253038.1 CDS sagI NC_009495.1 583938 585080 D Similar to Streptococcus iniae SagI sagI SWALL:Q8GP10 (EMBL:AF465842) (372 aa) fasta scores: E(): 2.3e-37, 32.04 38d in 362 aa; drug ABC transporter ATP-binding/permease 583938..585080 Clostridium botulinum A str. ATCC 3502 5184749 YP_001253039.1 CDS CBO0495 NC_009495.1 585208 585858 D Similar to Clostridium tetani protein with metal dependent protease domain ctc00793 SWALL:Q897E7 (EMBL:AE015938) (213 aa) fasta scores: E(): 8.2e-48,59.33 38d in 209 aa; metalloprotease 585208..585858 Clostridium botulinum A str. ATCC 3502 5184750 YP_001253040.1 CDS CBO0496 NC_009495.1 586326 586796 R hypothetical protein complement(586326..586796) Clostridium botulinum A str. ATCC 3502 5184751 YP_001253041.1 CDS CBO0497 NC_009495.1 586914 588203 R Similar to Staphylococcus aureus arsenical pump membrane protein ArsB SWALL:ARSB_STAAU (SWALL:P30329) (429 aa) fasta scores: E(): 8.8e-19, 23.55 38d in 433 aa, and to Bacillus anthracis arsenical pump family protein ba5143 SWALL:Q81K62 (EMBL:AE017039) (444 aa) fasta scores: E(): 2.4e-82, 52.9 38d in 431 aa; arsenical pump family protein complement(586914..588203) Clostridium botulinum A str. ATCC 3502 5184752 YP_001253042.1 CDS CBO0498 NC_009495.1 588303 589619 R Similar to Clostridium tetani protein ctc00796 SWALL:Q897E4 (EMBL:AE015938) (324 aa) fasta scores: E(): 5.2e-28, 45.38 38d in 260 aa; hypothetical protein complement(588303..589619) Clostridium botulinum A str. ATCC 3502 5184753 YP_001253043.1 CDS trmB NC_009495.1 589895 590548 D tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 589895..590548 Clostridium botulinum A str. ATCC 3502 5184754 YP_001253044.1 CDS CBO0500 NC_009495.1 590761 591024 D Similar to Clostridium perfringens hypothetical protein Cpe1164 cSWALL:Q8XL78 (EMBL:AP003189) (72 aa) fasta scores: E(): 0.006, 34.32 38d in 67 aa, and to Clostridium acetobutylicum uncharacterized protein,homolog of ywsa b.subtilis cac2598 SWALL:Q97FX7 (EMBL:AE007757) (76 aa) fasta scores: E(): 0.2, 28.98 38d in 69 aa; hypothetical protein 590761..591024 Clostridium botulinum A str. ATCC 3502 5184755 YP_001253045.1 CDS tpx NC_009495.1 591119 591613 R antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase complement(591119..591613) Clostridium botulinum A str. ATCC 3502 5187708 YP_001253046.1 CDS fabG NC_009495.1 591984 592727 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 591984..592727 Clostridium botulinum A str. ATCC 3502 5184757 YP_001253047.1 CDS CBO0503 NC_009495.1 592790 593743 D response regulator 592790..593743 Clostridium botulinum A str. ATCC 3502 5184758 YP_001253048.1 CDS CBO0504 NC_009495.1 593867 596023 R peptidoglycan hydrolase complement(593867..596023) Clostridium botulinum A str. ATCC 3502 5184759 YP_001253049.1 CDS CBO0505 NC_009495.1 596331 597275 D hydrolase, alpha/beta fold family 596331..597275 Clostridium botulinum A str. ATCC 3502 5184760 YP_001253050.1 CDS CBO0506 NC_009495.1 597538 598785 D response regulator 597538..598785 Clostridium botulinum A str. ATCC 3502 5184761 YP_001253051.1 CDS CBO0507 NC_009495.1 599082 599666 D HDIG domain protein 599082..599666 Clostridium botulinum A str. ATCC 3502 5184762 YP_001253052.1 CDS CBO0508 NC_009495.1 599702 601726 D methyl-accepting chemotaxis protein 599702..601726 Clostridium botulinum A str. ATCC 3502 5184763 YP_001253053.1 CDS CBO0509 NC_009495.1 601931 602725 D response regulator 601931..602725 Clostridium botulinum A str. ATCC 3502 5184764 YP_001253054.1 CDS serS NC_009495.1 603207 604484 D seryl-tRNA synthetase 603207..604484 Clostridium botulinum A str. ATCC 3502 5187553 YP_001253055.1 CDS CBO0511 NC_009495.1 605062 607416 D ATP-dependent helicase 605062..607416 Clostridium botulinum A str. ATCC 3502 5184766 YP_001253056.1 CDS CBO0512 NC_009495.1 607707 607898 R hypothetical protein complement(607707..607898) Clostridium botulinum A str. ATCC 3502 5184767 YP_001253057.1 CDS CBO0513 NC_009495.1 608228 608848 R GntR family transcriptional regulator complement(608228..608848) Clostridium botulinum A str. ATCC 3502 5184768 YP_001253058.1 CDS ceo NC_009495.1 609103 610056 D N(5)-(carboxyethyl)ornithine synthase 609103..610056 Clostridium botulinum A str. ATCC 3502 5184770 YP_001253059.1 CDS fbp NC_009495.1 610260 612266 R fructose-1,6-bisphosphatase complement(610260..612266) Clostridium botulinum A str. ATCC 3502 5184771 YP_001253060.1 CDS CBO0517 NC_009495.1 612550 612912 D hypothetical protein 612550..612912 Clostridium botulinum A str. ATCC 3502 5187365 YP_001253061.1 CDS CBO0518 NC_009495.1 613087 613500 D hemerythrin-like metal-binding domain-containing protein 613087..613500 Clostridium botulinum A str. ATCC 3502 5184773 YP_001253062.1 CDS CBO0519 NC_009495.1 613714 614409 R hypothetical protein complement(613714..614409) Clostridium botulinum A str. ATCC 3502 5184774 YP_001253063.1 CDS CBO0520 NC_009495.1 615148 615570 D hypothetical protein 615148..615570 Clostridium botulinum A str. ATCC 3502 5184775 YP_001253064.1 CDS CBO0521 NC_009495.1 615846 616496 R superoxide dismutase, Mn/Fe family complement(615846..616496) Clostridium botulinum A str. ATCC 3502 5184776 YP_001253065.1 CDS CBO0522 NC_009495.1 616689 617528 D metallo-beta-lactamase 616689..617528 Clostridium botulinum A str. ATCC 3502 5184777 YP_001253066.1 CDS CBO0523 NC_009495.1 617626 617925 R hypothetical protein complement(617626..617925) Clostridium botulinum A str. ATCC 3502 5184778 YP_001253067.1 CDS CBO0524 NC_009495.1 618073 619926 R hypothetical protein complement(618073..619926) Clostridium botulinum A str. ATCC 3502 5184779 YP_001253068.1 CDS CBO0525 NC_009495.1 620165 620320 D hypothetical protein 620165..620320 Clostridium botulinum A str. ATCC 3502 5184780 YP_001253069.1 CDS CBO0526 NC_009495.1 621121 621585 R transcription regulator AsnC complement(621121..621585) Clostridium botulinum A str. ATCC 3502 5184781 YP_001253070.1 CDS CBO0527 NC_009495.1 622110 622484 D hypothetical protein 622110..622484 Clostridium botulinum A str. ATCC 3502 5184782 YP_001253071.1 CDS CBO0528 NC_009495.1 623108 624481 D This CDS is also similar to CBO0529, 62.162 identity (62.30238ngapped) in 444 aa overlap.; amino acid permease 623108..624481 Clostridium botulinum A str. ATCC 3502 5184783 YP_001253072.1 CDS CBO0529 NC_009495.1 624919 626268 D This CDS is also similar to CBO0528, 62.162 identity (62.30238ngapped) in 444 aa overlap.; amino acid permease 624919..626268 Clostridium botulinum A str. ATCC 3502 5184784 YP_001253073.1 CDS CBO0530 NC_009495.1 626620 627129 D transferase, hexapeptide repeat family 626620..627129 Clostridium botulinum A str. ATCC 3502 5184785 YP_001253074.1 CDS CBO0531 NC_009495.1 627174 628046 D metallo beta-lactamase superfamily hydrolase 627174..628046 Clostridium botulinum A str. ATCC 3502 5184786 YP_001253075.1 CDS CBO0532 NC_009495.1 628367 630985 R calcium-translocating P-type ATPase complement(628367..630985) Clostridium botulinum A str. ATCC 3502 5187436 YP_001253076.1 CDS CBO0533 NC_009495.1 631279 631815 R Similar to the C-terminal region of Pseudomonas aeruginosa chromate transport protein ChrA SWALL:CHRA_PSEAE (SWALL:P14285) (416 aa) fasta scores: E(): 2e-08, 28.24 38d in 177 aa; chromate transporter complement(631279..631815) Clostridium botulinum A str. ATCC 3502 5184788 YP_001253077.1 CDS CBO0534 NC_009495.1 631815 632351 R Similar to N-terminal region of Pseudomonas aeruginosa chromate transport protein ChrA SWALL:CHRA_PSEAE (SWALL:P14285) (416 aa) fasta scores: E(): 2e-07, 28.35 38d in 134 aa; chromate transporter complement(631815..632351) Clostridium botulinum A str. ATCC 3502 5187604 YP_001253078.1 CDS CBO0535 NC_009495.1 632525 633115 D PemK family protein 632525..633115 Clostridium botulinum A str. ATCC 3502 5184790 YP_001253079.1 CDS CBO0536 NC_009495.1 633562 633987 D hypothetical protein 633562..633987 Clostridium botulinum A str. ATCC 3502 5187564 YP_001253080.1 CDS nadE NC_009495.1 634193 636109 R catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(634193..636109) Clostridium botulinum A str. ATCC 3502 5184792 YP_001253081.1 CDS CBO0538 NC_009495.1 636331 636771 D hypothetical protein 636331..636771 Clostridium botulinum A str. ATCC 3502 5184793 YP_001253082.1 CDS CBO0539 NC_009495.1 636774 637769 D hypothetical protein 636774..637769 Clostridium botulinum A str. ATCC 3502 5187481 YP_001253083.1 CDS CBO0540 NC_009495.1 637803 637943 D hypothetical protein 637803..637943 Clostridium botulinum A str. ATCC 3502 5184795 YP_001253084.1 CDS CBO0541 NC_009495.1 638132 638941 D CAAX amino terminal protease 638132..638941 Clostridium botulinum A str. ATCC 3502 5184796 YP_001253085.1 CDS pepP NC_009495.1 639161 640396 D xaa-pro aminopeptidase 639161..640396 Clostridium botulinum A str. ATCC 3502 5184797 YP_001253086.1 CDS CBO0543 NC_009495.1 641049 641510 R hypothetical protein complement(641049..641510) Clostridium botulinum A str. ATCC 3502 5184798 YP_001253087.1 CDS CBO0543A NC_009495.1 641916 642071 R DNA-binding protein complement(641916..642071) Clostridium botulinum A str. ATCC 3502 5204257 YP_001253088.1 CDS CBO0544 NC_009495.1 642085 642546 R GNAT family acetyltransferase complement(642085..642546) Clostridium botulinum A str. ATCC 3502 5184799 YP_001253089.1 CDS CBO0545 NC_009495.1 642930 643142 D (2Fe-2S)-binding protein 642930..643142 Clostridium botulinum A str. ATCC 3502 5184800 YP_001253090.1 CDS CBO0546 NC_009495.1 643614 643751 D Similar to the N-terminal region of Borrelia burgdorferi hypothetical protein Bb0224 bb0224 SWALL:O51242 (EMBL:AE001132) (94 aa) fasta scores: E(): 6.9, 46.42 38d in 28 aa; hypothetical protein 643614..643751 Clostridium botulinum A str. ATCC 3502 5184801 YP_001253091.1 CDS CBO0547 NC_009495.1 643933 644040 D Similar to the C-terminal region of Bacillus anthracis hypothetical protein ba3885 SWALL:Q81WT3 (EMBL:AE017036) (118 aa) fasta scores: E(): 4.6, 31.25 38d in 32 aa; hypothetical protein 643933..644040 Clostridium botulinum A str. ATCC 3502 5184802 YP_001253092.1 CDS CBO0548 NC_009495.1 644106 645014 D exported protein 644106..645014 Clostridium botulinum A str. ATCC 3502 5184803 YP_001253093.1 CDS CBO0549 NC_009495.1 645282 645791 D Similar to the C-terminal region of Xestia c-nigrum granulosis virus orf42 SWALL:Q9PZ01 (EMBL:AF162221) (379 aa) fasta scores: E(): 0.85, 22.81 38d in 149 aa; hypothetical protein 645282..645791 Clostridium botulinum A str. ATCC 3502 5184804 YP_001253094.1 CDS cstA NC_009495.1 645801 647444 D carbon starvation protein CstA 645801..647444 Clostridium botulinum A str. ATCC 3502 5184805 YP_001253095.1 CDS CBO0551 NC_009495.1 647905 648594 D hypothetical protein 647905..648594 Clostridium botulinum A str. ATCC 3502 5184806 YP_001253096.1 CDS CBO0552 NC_009495.1 649514 651505 D methyl-accepting chemotaxis protein 649514..651505 Clostridium botulinum A str. ATCC 3502 5184807 YP_001253097.1 CDS mscL NC_009495.1 653982 654383 D large conductance mechanosensitive channel protein 653982..654383 Clostridium botulinum A str. ATCC 3502 5184810 YP_001253098.1 CDS CBO0556 NC_009495.1 654749 655432 D proton-coupled thiamine transporter YuaJ 654749..655432 Clostridium botulinum A str. ATCC 3502 5184811 YP_001253099.1 CDS CBO0557 NC_009495.1 655565 655765 R hypothetical protein complement(655565..655765) Clostridium botulinum A str. ATCC 3502 5184812 YP_001253100.1 CDS CBO0558 NC_009495.1 655956 657092 D SEC-C motif domain protein 655956..657092 Clostridium botulinum A str. ATCC 3502 5184813 YP_001253101.1 CDS CBO0558A NC_009495.1 657580 657960 D GntR family transcriptional regulator 657580..657960 Clostridium botulinum A str. ATCC 3502 5204258 YP_001253102.1 CDS CBO0559 NC_009495.1 657953 658648 D ABC transporter ATP-binding protein 657953..658648 Clostridium botulinum A str. ATCC 3502 5184814 YP_001253103.1 CDS CBO0560 NC_009495.1 658648 659409 D ABC transporter permease 658648..659409 Clostridium botulinum A str. ATCC 3502 5184815 YP_001253104.1 CDS potA NC_009495.1 660226 661308 D spermidine/putrescine ABC transporter ATP-binding protein 660226..661308 Clostridium botulinum A str. ATCC 3502 5184816 YP_001253105.1 CDS potB NC_009495.1 661308 662267 D spermidine/putrescine ABC transporter permease 661308..662267 Clostridium botulinum A str. ATCC 3502 5187496 YP_001253106.1 CDS potCD NC_009495.1 662270 664111 D The N-terminal and C-terminal halves of this CDS are similar to Escherichia coli PotC and PotD,respectively. This indicate that this CDS resulted from a fusion between two adjacent CDSs.; spermidine/putrescine ABC transporter permease 662270..664111 Clostridium botulinum A str. ATCC 3502 5187494 YP_001253107.1 CDS CBO0564 NC_009495.1 664468 665337 R AraC family transcriptional regulator complement(664468..665337) Clostridium botulinum A str. ATCC 3502 5184819 YP_001253108.1 CDS CBO0565 NC_009495.1 665650 666900 D Sodium:dicarboxylate symporter 665650..666900 Clostridium botulinum A str. ATCC 3502 5184820 YP_001253109.1 CDS CBO0566 NC_009495.1 667493 667642 D This CDS is similar to N-terminal region of Bradypodion setaroi NADH dehydrogenase subunit 2 and to C-terminal region of Clostridium tetani ABC transporter-associated permease. This small CDS could be a gene remnant.; hypothetical protein 667493..667642 Clostridium botulinum A str. ATCC 3502 5184821 YP_001253110.1 CDS CBO0567 NC_009495.1 668046 668690 D metal-dependent phosphohydrolase 668046..668690 Clostridium botulinum A str. ATCC 3502 5184822 YP_001253111.1 CDS CBO0568 NC_009495.1 668955 669071 D hypothetical protein 668955..669071 Clostridium botulinum A str. ATCC 3502 5184823 YP_001253112.1 CDS CBO0569 NC_009495.1 669092 669385 D Similar to C-terminal region of Thermoplasma acidophilum protease synthase and sporulation negative regulatory protein ta0375 SWALL:Q9HL56 (EMBL:AL445064) (154 aa) fasta scores: E(): 8.9, 30 38d in 70 aa; hypothetical protein 669092..669385 Clostridium botulinum A str. ATCC 3502 5184824 YP_001253113.1 CDS CBO0570 NC_009495.1 669389 670393 D CAAX amino terminal protease 669389..670393 Clostridium botulinum A str. ATCC 3502 5184825 YP_001253114.1 CDS CBO0571 NC_009495.1 670707 671555 R pentapeptide repeat-containing protein complement(670707..671555) Clostridium botulinum A str. ATCC 3502 5184826 YP_001253115.1 CDS CBO0573 NC_009495.1 671994 672344 D Similar to the C-terminal regions of various methionyl-tRNA synthetase such as Escherichia coli methionyl-tRNA synthetase MetG, and similar over the entire length of certain proteins such as Pyrococcus abyssi fragment of methionyl-tRNA synthetase pyrab04130 or pab0278 SWALL:Q9V1L4 (EMBL:AJ248284) (109 aa) fasta scores: E(): 6e-11, 43 38d in 100 aa; tRNA-binding protein 671994..672344 Clostridium botulinum A str. ATCC 3502 5184828 YP_001253116.1 CDS CBO0574 NC_009495.1 672518 673126 D signal peptidase I 672518..673126 Clostridium botulinum A str. ATCC 3502 5184829 YP_001253117.1 CDS CBO0575 NC_009495.1 673955 674656 D DNA-binding response regulator, LytTr family 673955..674656 Clostridium botulinum A str. ATCC 3502 5184830 YP_001253118.1 CDS CBO0576 NC_009495.1 675270 675389 D hypothetical protein 675270..675389 Clostridium botulinum A str. ATCC 3502 5184831 YP_001253119.1 CDS CBO0577 NC_009495.1 675429 675554 D hypothetical protein 675429..675554 Clostridium botulinum A str. ATCC 3502 5184832 YP_001253120.1 CDS CBO0578 NC_009495.1 676248 676394 D hypothetical protein 676248..676394 Clostridium botulinum A str. ATCC 3502 5184833 YP_001253121.1 CDS CBO0579 NC_009495.1 676419 676604 R hypothetical protein complement(676419..676604) Clostridium botulinum A str. ATCC 3502 5184834 YP_001253122.1 CDS CBO0580 NC_009495.1 676913 678265 D radical SAM domain protein 676913..678265 Clostridium botulinum A str. ATCC 3502 5184835 YP_001253123.1 CDS CBO0581 NC_009495.1 678258 678848 D hypothetical protein 678258..678848 Clostridium botulinum A str. ATCC 3502 5184836 YP_001253124.1 CDS CBO0582 NC_009495.1 678885 679382 D hypothetical protein 678885..679382 Clostridium botulinum A str. ATCC 3502 5184837 YP_001253125.1 CDS CBO0583 NC_009495.1 679417 681129 D ABC transporter permease/ATP-binding protein 679417..681129 Clostridium botulinum A str. ATCC 3502 5184838 YP_001253126.1 CDS CBO0584 NC_009495.1 681239 681988 D lipoprotein 681239..681988 Clostridium botulinum A str. ATCC 3502 5184839 YP_001253127.1 CDS CBO0585 NC_009495.1 682011 682490 D GNAT family acetyltransferase 682011..682490 Clostridium botulinum A str. ATCC 3502 5187048 YP_001253128.1 CDS CBO0586 NC_009495.1 682493 684955 D ABC transporter permease 682493..684955 Clostridium botulinum A str. ATCC 3502 5187047 YP_001253129.1 CDS CBO0587 NC_009495.1 684970 685650 D ABC transporter ATP-binding protein 684970..685650 Clostridium botulinum A str. ATCC 3502 5184842 YP_001253130.1 CDS CBO0588 NC_009495.1 686198 686482 D hypothetical protein 686198..686482 Clostridium botulinum A str. ATCC 3502 5184843 YP_001253131.1 CDS CBO0589 NC_009495.1 686613 686753 D hypothetical protein 686613..686753 Clostridium botulinum A str. ATCC 3502 5184844 YP_001253132.1 CDS CBO0590 NC_009495.1 686811 687677 D degV family protein 686811..687677 Clostridium botulinum A str. ATCC 3502 5184845 YP_001253133.1 CDS CBO0591 NC_009495.1 688075 688587 D hypothetical protein 688075..688587 Clostridium botulinum A str. ATCC 3502 5184846 YP_001253134.1 CDS CBO0592 NC_009495.1 688634 688780 R hypothetical protein complement(688634..688780) Clostridium botulinum A str. ATCC 3502 5184847 YP_001253135.1 CDS CBO0593 NC_009495.1 689101 690993 D sulfatase 689101..690993 Clostridium botulinum A str. ATCC 3502 5184848 YP_001253136.1 CDS CBO0594 NC_009495.1 691129 692541 R sigma-54 dependent transcriptional regulator complement(691129..692541) Clostridium botulinum A str. ATCC 3502 5184849 YP_001253137.1 CDS CBO0595 NC_009495.1 692876 694099 R nucleoside transporter NupC family complement(692876..694099) Clostridium botulinum A str. ATCC 3502 5184850 YP_001253138.1 CDS CBO0596 NC_009495.1 694305 694454 D hypothetical protein 694305..694454 Clostridium botulinum A str. ATCC 3502 5184851 YP_001253139.1 CDS asnC NC_009495.1 695272 696663 D catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 695272..696663 Clostridium botulinum A str. ATCC 3502 5184852 YP_001253140.1 CDS CBO0598 NC_009495.1 696957 697277 D PadR family transcriptional regulator 696957..697277 Clostridium botulinum A str. ATCC 3502 5184853 YP_001253141.1 CDS CBO0599 NC_009495.1 697284 697829 D hypothetical protein 697284..697829 Clostridium botulinum A str. ATCC 3502 5184854 YP_001253142.1 CDS CBO0600 NC_009495.1 698032 698487 D LytR family transcriptional regulator 698032..698487 Clostridium botulinum A str. ATCC 3502 5187873 YP_001253143.1 CDS CBO0601 NC_009495.1 698489 699187 D hypothetical protein 698489..699187 Clostridium botulinum A str. ATCC 3502 5184856 YP_001253144.1 CDS CBO0602 NC_009495.1 699789 700676 D AraC family transcriptional regulator 699789..700676 Clostridium botulinum A str. ATCC 3502 5184857 YP_001253145.1 CDS CBO0603 NC_009495.1 701120 702016 D CAAX amino terminal protease 701120..702016 Clostridium botulinum A str. ATCC 3502 5184858 YP_001253146.1 CDS CBO0604 NC_009495.1 702029 702421 D DNA-binding protein 702029..702421 Clostridium botulinum A str. ATCC 3502 5184859 YP_001253147.1 CDS CBO0605 NC_009495.1 702884 704023 D . Also similar to CBO0606 (69.816 38dentity in 381 aa overlap.); lipoprotein 702884..704023 Clostridium botulinum A str. ATCC 3502 5184860 YP_001253148.1 CDS CBO0606 NC_009495.1 704220 705326 D . Also similar to CBO0605 (69.816 38dentity in 381 aa overlap.); lipoprotein 704220..705326 Clostridium botulinum A str. ATCC 3502 5184861 YP_001253149.1 CDS CBO0607 NC_009495.1 705501 706184 D DNA-binding response regulator 705501..706184 Clostridium botulinum A str. ATCC 3502 5184862 YP_001253150.1 CDS CBO0608 NC_009495.1 706189 707610 D sensor histidine kinase 706189..707610 Clostridium botulinum A str. ATCC 3502 5184863 YP_001253151.1 CDS CBO0609 NC_009495.1 707816 708532 D D-alanyl-D-alanine carboxypeptidase 707816..708532 Clostridium botulinum A str. ATCC 3502 5184864 YP_001253152.1 CDS CBO0610 NC_009495.1 708553 709245 D DNA-binding response regulator 708553..709245 Clostridium botulinum A str. ATCC 3502 5184865 YP_001253153.1 CDS CBO0611 NC_009495.1 709235 710356 D sensor histidine kinase 709235..710356 Clostridium botulinum A str. ATCC 3502 5184866 YP_001253154.1 CDS CBO0612 NC_009495.1 710516 711655 R hypothetical protein complement(710516..711655) Clostridium botulinum A str. ATCC 3502 5184867 YP_001253155.1 CDS CBO0613 NC_009495.1 711798 712610 R response regulator complement(711798..712610) Clostridium botulinum A str. ATCC 3502 5184868 YP_001253156.1 CDS CBO0614 NC_009495.1 712607 713905 R sensor histidine kinase complement(712607..713905) Clostridium botulinum A str. ATCC 3502 5184869 YP_001253157.1 CDS CBO0615 NC_009495.1 714300 715460 D rod shape-determining protein RodA 714300..715460 Clostridium botulinum A str. ATCC 3502 5184870 YP_001253158.1 CDS CBO0616 NC_009495.1 715769 716953 R cyclopropane-fatty-acyl-phospholipid synthase complement(715769..716953) Clostridium botulinum A str. ATCC 3502 5184871 YP_001253159.1 CDS CBO0617 NC_009495.1 717275 718306 D The C-terminal region of this CDS is similar to arsenical resistance genes such as Staphylococcus aureus arsenical resistance operon repressor ArsR SWALL:ARSR_STAAU (SWALL:P30338) (104 aa) fasta scores: E(): 0.0047, 38.27 38d in 81 aa, and its N-terminal region is similar to several including Plasmodium yoelii yoelii bir1 protein py02660 SWALL:EAA22137 (EMBL:AABL01000733) (346 aa) fasta scores: E(): 1.2,23.21 38d in 224 aa, and Bacillus subtilis RNA polymerase sigma-G factor SigG or SpoIIIG or bsu15330 SWALL:RPSG_BACSU (SWALL:P19940) (260 aa) fasta scores: E(): 9.2, 25 38d in 168 aa; hypothetical protein 717275..718306 Clostridium botulinum A str. ATCC 3502 5184872 YP_001253160.1 CDS CBO0618 NC_009495.1 718476 720155 D ABC transporter permease/ATP-binding protein 718476..720155 Clostridium botulinum A str. ATCC 3502 5184873 YP_001253161.1 CDS cat NC_009495.1 720578 721204 R chloramphenicol acetyltransferase complement(720578..721204) Clostridium botulinum A str. ATCC 3502 5187860 YP_001253162.1 CDS CBO0620 NC_009495.1 721369 721986 D TetR family transcriptional regulator 721369..721986 Clostridium botulinum A str. ATCC 3502 5184875 YP_001253163.1 CDS CBO0621 NC_009495.1 722089 722559 D GNAT family acetyltransferase 722089..722559 Clostridium botulinum A str. ATCC 3502 5184876 YP_001253164.1 CDS csaA NC_009495.1 722626 722955 R chaperone CsaA complement(722626..722955) Clostridium botulinum A str. ATCC 3502 5184877 YP_001253165.1 CDS CBO0623 NC_009495.1 723163 723888 R AraC family transcriptional regulator complement(723163..723888) Clostridium botulinum A str. ATCC 3502 5184878 YP_001253166.1 CDS CBO0624 NC_009495.1 724185 724736 R DNA-binding protein complement(724185..724736) Clostridium botulinum A str. ATCC 3502 5184879 YP_001253167.1 CDS CBO0625 NC_009495.1 724993 725583 D hypothetical protein 724993..725583 Clostridium botulinum A str. ATCC 3502 5184880 YP_001253168.1 CDS CBO0626 NC_009495.1 725711 726727 D ABC transporter 725711..726727 Clostridium botulinum A str. ATCC 3502 5184881 YP_001253169.1 CDS CBO0627 NC_009495.1 727110 727826 D ABC transporter ATP-binding protein 727110..727826 Clostridium botulinum A str. ATCC 3502 5187075 YP_001253170.1 CDS CBO0628 NC_009495.1 727823 727966 D hypothetical protein 727823..727966 Clostridium botulinum A str. ATCC 3502 5184883 YP_001253171.1 CDS CBO0629 NC_009495.1 728044 729267 R allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase complement(728044..729267) Clostridium botulinum A str. ATCC 3502 5184884 YP_001253172.1 CDS CBO0630 NC_009495.1 730100 731995 D MutS domain-containing protein 730100..731995 Clostridium botulinum A str. ATCC 3502 5184885 YP_001253173.1 CDS CBO0631 NC_009495.1 732223 732534 D hypothetical protein 732223..732534 Clostridium botulinum A str. ATCC 3502 5184886 YP_001253174.1 CDS CBO0632 NC_009495.1 732592 732942 D hypothetical protein 732592..732942 Clostridium botulinum A str. ATCC 3502 5184887 YP_001253175.1 CDS CBO0633 NC_009495.1 733029 733502 R nimA protein complement(733029..733502) Clostridium botulinum A str. ATCC 3502 5184888 YP_001253176.1 CDS CBO0634 NC_009495.1 733525 733860 R hypothetical protein complement(733525..733860) Clostridium botulinum A str. ATCC 3502 5184889 YP_001253177.1 CDS CBO0636 NC_009495.1 733908 734192 R hypothetical protein complement(733908..734192) Clostridium botulinum A str. ATCC 3502 5187146 YP_001253178.1 CDS CBO0637 NC_009495.1 734189 734353 R hypothetical protein complement(734189..734353) Clostridium botulinum A str. ATCC 3502 5184892 YP_001253179.1 CDS CBO0638 NC_009495.1 734563 735042 D pyridoxamine 5'-phosphate oxidase 734563..735042 Clostridium botulinum A str. ATCC 3502 5184893 YP_001253180.1 CDS CBO0639 NC_009495.1 735266 735577 R DNA repair protein complement(735266..735577) Clostridium botulinum A str. ATCC 3502 5184894 YP_001253181.1 CDS CBO0640 NC_009495.1 735716 737125 R GntR family transcriptional regulator complement(735716..737125) Clostridium botulinum A str. ATCC 3502 5184895 YP_001253182.1 CDS CBO0641 NC_009495.1 737318 737626 D hypothetical protein 737318..737626 Clostridium botulinum A str. ATCC 3502 5184896 YP_001253183.1 CDS CBO0642 NC_009495.1 737681 737941 D hypothetical protein 737681..737941 Clostridium botulinum A str. ATCC 3502 5187203 YP_001253184.1 CDS rhlE NC_009495.1 738200 739477 D ATP-dependent RNA helicase RhlE 738200..739477 Clostridium botulinum A str. ATCC 3502 5187308 YP_001253185.1 CDS CBO0644 NC_009495.1 740053 740541 D rubrerythrin 740053..740541 Clostridium botulinum A str. ATCC 3502 5184899 YP_001253186.1 CDS CBO0645 NC_009495.1 740713 741150 D MarR family transcriptional regulator 740713..741150 Clostridium botulinum A str. ATCC 3502 5184900 YP_001253187.1 CDS CBO0646 NC_009495.1 741178 742611 D EmrB/QacA family drug resistance transporter 741178..742611 Clostridium botulinum A str. ATCC 3502 5187197 YP_001253188.1 CDS CBO0647 NC_009495.1 742733 743923 R hypothetical protein complement(742733..743923) Clostridium botulinum A str. ATCC 3502 5184902 YP_001253189.1 CDS CBO0648 NC_009495.1 744048 744923 D LysR family transcriptional regulator 744048..744923 Clostridium botulinum A str. ATCC 3502 5184903 YP_001253190.1 CDS CBO0649 NC_009495.1 745050 746744 D hypothetical protein 745050..746744 Clostridium botulinum A str. ATCC 3502 5184904 YP_001253191.1 CDS CBO0650 NC_009495.1 747139 747456 D hypothetical protein 747139..747456 Clostridium botulinum A str. ATCC 3502 5184905 YP_001253192.1 CDS CBO0651 NC_009495.1 747523 748191 D exported protein 747523..748191 Clostridium botulinum A str. ATCC 3502 5184906 YP_001253193.1 CDS CBO0652 NC_009495.1 748322 751288 D helicase 748322..751288 Clostridium botulinum A str. ATCC 3502 5184907 YP_001253194.1 CDS mutT1 NC_009495.1 751328 751726 R Also similar to CBO2085 (71.21 38d); mutator protein complement(751328..751726) Clostridium botulinum A str. ATCC 3502 5184908 YP_001253195.1 CDS CBO0654 NC_009495.1 752190 753029 D BglG family transcriptional antiterminator 752190..753029 Clostridium botulinum A str. ATCC 3502 5184909 YP_001253196.1 CDS CBO0655 NC_009495.1 753234 755075 D PTS system beta-glucoside-specific transporter subunit IIABC 753234..755075 Clostridium botulinum A str. ATCC 3502 5184910 YP_001253197.1 CDS CBO0656 NC_009495.1 755087 755905 D PHP domain-containing protein 755087..755905 Clostridium botulinum A str. ATCC 3502 5184911 YP_001253198.1 CDS CBO0657 NC_009495.1 756532 757242 D CRP family transcriptional regulator 756532..757242 Clostridium botulinum A str. ATCC 3502 5184912 YP_001253199.1 CDS flrD NC_009495.1 757401 758633 D metallo-beta-lactamase 757401..758633 Clostridium botulinum A str. ATCC 3502 5184913 YP_001253200.1 CDS CBO0659 NC_009495.1 758693 759391 D scdA protein 758693..759391 Clostridium botulinum A str. ATCC 3502 5184914 YP_001253201.1 CDS CBO0660 NC_009495.1 759417 760172 D hypothetical protein 759417..760172 Clostridium botulinum A str. ATCC 3502 5184915 YP_001253202.1 CDS CBO0661 NC_009495.1 760245 760664 R hypothetical protein complement(760245..760664) Clostridium botulinum A str. ATCC 3502 5184916 YP_001253203.1 CDS gltC NC_009495.1 761332 762516 D sodium/glutamate symport carrier protein 761332..762516 Clostridium botulinum A str. ATCC 3502 5184917 YP_001253204.1 CDS CBO0663 NC_009495.1 763125 763592 D hypothetical protein 763125..763592 Clostridium botulinum A str. ATCC 3502 5184918 YP_001253205.1 CDS CBO0664 NC_009495.1 763599 764942 D hypothetical protein 763599..764942 Clostridium botulinum A str. ATCC 3502 5184919 YP_001253206.1 CDS CBO0665 NC_009495.1 765192 765395 R exported protein complement(765192..765395) Clostridium botulinum A str. ATCC 3502 5184920 YP_001253207.1 CDS CBO0666 NC_009495.1 765849 766835 D metallo-beta-lactamase superfamily protein 765849..766835 Clostridium botulinum A str. ATCC 3502 5184921 YP_001253208.1 CDS CBO0667 NC_009495.1 766986 767120 D hypothetical protein 766986..767120 Clostridium botulinum A str. ATCC 3502 5184922 YP_001253209.1 CDS CBO0668 NC_009495.1 767177 768070 D ABC transporter permease 767177..768070 Clostridium botulinum A str. ATCC 3502 5184923 YP_001253210.1 CDS CBO0669 NC_009495.1 768033 768788 D ABC transporter ATP-binding protein 768033..768788 Clostridium botulinum A str. ATCC 3502 5184924 YP_001253211.1 CDS CBO0670 NC_009495.1 768819 769778 D ABC transporter substrate-binding protein 768819..769778 Clostridium botulinum A str. ATCC 3502 5184925 YP_001253212.1 CDS CBO0671 NC_009495.1 769792 770172 D hypothetical protein 769792..770172 Clostridium botulinum A str. ATCC 3502 5184926 YP_001253213.1 CDS CBO0672 NC_009495.1 770892 771575 D hypothetical protein 770892..771575 Clostridium botulinum A str. ATCC 3502 5184927 YP_001253214.1 CDS CBO0673 NC_009495.1 771866 773287 R hypothetical protein complement(771866..773287) Clostridium botulinum A str. ATCC 3502 5184928 YP_001253215.1 CDS CBO0674 NC_009495.1 773284 773847 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 complement(773284..773847) Clostridium botulinum A str. ATCC 3502 5187597 YP_001253216.1 CDS CBO0675 NC_009495.1 774076 775035 D dihydrouridine synthase 774076..775035 Clostridium botulinum A str. ATCC 3502 5184930 YP_001253217.1 CDS CBO0676 NC_009495.1 775171 775635 D transcription elongation factor GreA 775171..775635 Clostridium botulinum A str. ATCC 3502 5184931 YP_001253218.1 CDS CBO0677 NC_009495.1 775797 776549 D hypothetical protein 775797..776549 Clostridium botulinum A str. ATCC 3502 5184932 YP_001253219.1 CDS hsdM NC_009495.1 776824 778281 D type I restriction enzyme M subunit 776824..778281 Clostridium botulinum A str. ATCC 3502 5184933 YP_001253220.1 CDS hsdS NC_009495.1 778376 779536 D type I restriction enzyme S subunit 778376..779536 Clostridium botulinum A str. ATCC 3502 5184934 YP_001253221.1 CDS CBO0680 NC_009495.1 779624 779809 D hypothetical protein 779624..779809 Clostridium botulinum A str. ATCC 3502 5184935 YP_001253222.1 CDS CBO0681 NC_009495.1 780001 780234 D Similar to the C-terminal region of Clostridium tetani hypothetical protein ctp44 SWALL:Q899X1 (EMBL:AF528097) (306 aa) fasta scores: E(): 0.00017,37.37 38d in 99 aa; hypothetical protein 780001..780234 Clostridium botulinum A str. ATCC 3502 5184936 YP_001253223.1 CDS hsdR NC_009495.1 780378 783725 D type I restriction enzyme R subunit 780378..783725 Clostridium botulinum A str. ATCC 3502 5184937 YP_001253224.1 CDS pcrA NC_009495.1 783783 786437 D ATP-dependent DNA helicase 783783..786437 Clostridium botulinum A str. ATCC 3502 5184938 YP_001253225.1 CDS CBO0684 NC_009495.1 786602 786718 R hypothetical protein complement(786602..786718) Clostridium botulinum A str. ATCC 3502 5184939 YP_001253226.1 CDS CBO0685 NC_009495.1 787005 787826 D AraC family transcriptional regulator 787005..787826 Clostridium botulinum A str. ATCC 3502 5187195 YP_001253227.1 CDS fhuD2 NC_009495.1 788296 789285 D ferrichrome ABC transporter 788296..789285 Clostridium botulinum A str. ATCC 3502 5184941 YP_001253228.1 CDS fhuB2 NC_009495.1 789381 790421 D ferrichrome ABC transporter permease 789381..790421 Clostridium botulinum A str. ATCC 3502 5184942 YP_001253229.1 CDS fhuG2 NC_009495.1 790421 791461 D ferrichrome ABC transporter permease 790421..791461 Clostridium botulinum A str. ATCC 3502 5187051 YP_001253230.1 CDS fhuC2 NC_009495.1 791689 792474 D ferrichrome ABC transporter ATP-binding protein 791689..792474 Clostridium botulinum A str. ATCC 3502 5187528 YP_001253231.1 CDS nifH NC_009495.1 792504 793253 D nitrogenase iron protein 792504..793253 Clostridium botulinum A str. ATCC 3502 5184945 YP_001253232.1 CDS nifE1 NC_009495.1 793256 794524 D hypothetical protein 793256..794524 Clostridium botulinum A str. ATCC 3502 5184946 YP_001253233.1 CDS nifE2 NC_009495.1 794564 795802 D hypothetical protein 794564..795802 Clostridium botulinum A str. ATCC 3502 5184947 YP_001253234.1 CDS CBO0693 NC_009495.1 796125 798137 D methyl-accepting chemotaxis protein 796125..798137 Clostridium botulinum A str. ATCC 3502 5187154 YP_001253235.1 CDS CBO0694 NC_009495.1 798189 798353 D Similar to the C-terminal region of Porphyromonas gingivalis mate efflux family protein pg1446 SWALL:Q7MUQ1 (EMBL:AE017177) (439 aa) fasta scores: E(): 0.22, 43.24 id in 37 aa; hypothetical protein 798189..798353 Clostridium botulinum A str. ATCC 3502 5184949 YP_001253236.1 CDS CBO0695 NC_009495.1 798433 799842 R hypothetical protein complement(798433..799842) Clostridium botulinum A str. ATCC 3502 5184950 YP_001253237.1 CDS gcvT NC_009495.1 800406 801533 D catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 800406..801533 Clostridium botulinum A str. ATCC 3502 5184951 YP_001253238.1 CDS gcvH NC_009495.1 801658 802050 D part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 801658..802050 Clostridium botulinum A str. ATCC 3502 5184952 YP_001253239.1 CDS gcvP NC_009495.1 802053 803393 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 802053..803393 Clostridium botulinum A str. ATCC 3502 5184953 YP_001253240.1 CDS gcvP' NC_009495.1 803393 804847 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 803393..804847 Clostridium botulinum A str. ATCC 3502 5184954 YP_001253241.1 CDS pdhD1 NC_009495.1 805041 806429 D dihydrolipoyl dehydrogenase (E3 component of pyruvate complex) 805041..806429 Clostridium botulinum A str. ATCC 3502 5184955 YP_001253242.1 CDS lplA1 NC_009495.1 806447 807424 D lipoate-protein ligase A 806447..807424 Clostridium botulinum A str. ATCC 3502 5184956 YP_001253243.1 CDS CBO0702 NC_009495.1 807834 809927 D Weakly similar to N-terminal region of Spiroplasma citri chromosomal replication initiator protein DnaA dnaA SWALL:DNAA_SPICI (SWALL:P34028) (450 aa) fasta scores: E(): 7.2, 21.14 38d in 350 aa, and to the entire length of Plasmodium yoelii yoelii arabidopsis thaliana brahma ortholog py06648 SWALL:EAA18896 (EMBL:AABL01002276) (632 aa) fasta scores: E(): 2.1, 21.99 38d in 623 aa; hypothetical protein 807834..809927 Clostridium botulinum A str. ATCC 3502 5184957 YP_001253244.1 CDS CBO0703 NC_009495.1 810289 811125 D AraC family transcriptional regulator 810289..811125 Clostridium botulinum A str. ATCC 3502 5184958 YP_001253245.1 CDS CBO0704 NC_009495.1 811219 811767 D hypothetical protein 811219..811767 Clostridium botulinum A str. ATCC 3502 5184959 YP_001253246.1 CDS CBO0705 NC_009495.1 811969 812133 D Similar to Clostridium acetobutylicum hypothetical protein Cac1490 cac1490 SWALL:Q97IZ6 (EMBL:AE007660) (57 aa) fasta scores: E(): 1.5e-07, 56.25 38d in 48 aa, and to the C-terminal region of Lumpy skin disease virus early transcription factor small subunit lw017 SWALL:Q91T35 (EMBL:AF336128) (176 aa) fasta scores: E(): 8.5, 25.8 38d in 62 aa; hypothetical protein 811969..812133 Clostridium botulinum A str. ATCC 3502 5184960 YP_001253247.1 CDS CBO0706 NC_009495.1 812843 813607 D hypothetical protein 812843..813607 Clostridium botulinum A str. ATCC 3502 5184961 YP_001253248.1 CDS CBO0707 NC_009495.1 813661 814119 D hypothetical protein 813661..814119 Clostridium botulinum A str. ATCC 3502 5184962 YP_001253249.1 CDS CBO0708 NC_009495.1 814445 815209 D MerR family transcriptional regulator 814445..815209 Clostridium botulinum A str. ATCC 3502 5184963 YP_001253250.1 CDS CBO0709 NC_009495.1 815261 815992 D ABC transporter ATP-binding protein 815261..815992 Clostridium botulinum A str. ATCC 3502 5184964 YP_001253251.1 CDS CBO0710 NC_009495.1 815976 816722 D drug resistance ABC-2 type transporter permease 815976..816722 Clostridium botulinum A str. ATCC 3502 5184965 YP_001253252.1 CDS CBO0711 NC_009495.1 816930 819167 D drug resistance ABC transporter 816930..819167 Clostridium botulinum A str. ATCC 3502 5184966 YP_001253253.1 CDS CBO0712 NC_009495.1 819361 821619 D helicase 819361..821619 Clostridium botulinum A str. ATCC 3502 5184967 YP_001253254.1 CDS CBO0713 NC_009495.1 821889 822596 R Also similar to CBO2045 (67.1 38d); hypothetical protein complement(821889..822596) Clostridium botulinum A str. ATCC 3502 5187147 YP_001253255.1 CDS CBO0714 NC_009495.1 822679 823533 R AraC family transcriptional regulator complement(822679..823533) Clostridium botulinum A str. ATCC 3502 5184969 YP_001253256.1 CDS CBO0715 NC_009495.1 824025 824906 R transporter EamA family complement(824025..824906) Clostridium botulinum A str. ATCC 3502 5187108 YP_001253257.1 CDS CBO0716 NC_009495.1 825962 826222 D tfoX domain protein 825962..826222 Clostridium botulinum A str. ATCC 3502 5187413 YP_001253258.1 CDS CBO0717 NC_009495.1 826248 826742 D acetyltransferase 826248..826742 Clostridium botulinum A str. ATCC 3502 5187096 YP_001253259.1 CDS CBO0718 NC_009495.1 826921 827919 R 3-oxoacyl-ACP synthase complement(826921..827919) Clostridium botulinum A str. ATCC 3502 5184973 YP_001253260.1 CDS CBO0719 NC_009495.1 828168 829634 D methyl-accepting chemotaxis protein 828168..829634 Clostridium botulinum A str. ATCC 3502 5184974 YP_001253261.1 CDS CBO0720 NC_009495.1 830142 830417 D hypothetical protein 830142..830417 Clostridium botulinum A str. ATCC 3502 5184975 YP_001253262.1 CDS CBO0721 NC_009495.1 830616 832169 D ABC transporter ATP-binding protein 830616..832169 Clostridium botulinum A str. ATCC 3502 5184976 YP_001253263.1 CDS CBO0722 NC_009495.1 832283 832417 D Similar to C-terminal region of Bacillus subtilis transcription regulator yobV SWALL:O34920 (EMBL:AF027868) (313 aa) fasta scores: E(): 6.4, 44.44 38d in 36 aa; hypothetical protein 832283..832417 Clostridium botulinum A str. ATCC 3502 5184977 YP_001253264.1 CDS CBO0723 NC_009495.1 832471 833097 D DJ-1/PfpI family protein 832471..833097 Clostridium botulinum A str. ATCC 3502 5184978 YP_001253265.1 CDS cysK NC_009495.1 833324 834232 R cysteine synthase complement(833324..834232) Clostridium botulinum A str. ATCC 3502 5184979 YP_001253266.1 CDS luxS NC_009495.1 834216 834668 R catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase complement(834216..834668) Clostridium botulinum A str. ATCC 3502 5184980 YP_001253267.1 CDS metC NC_009495.1 834670 835812 R cystathionine beta-lyase complement(834670..835812) Clostridium botulinum A str. ATCC 3502 5184981 YP_001253268.1 CDS CBO0727 NC_009495.1 835913 836539 R hypothetical protein complement(835913..836539) Clostridium botulinum A str. ATCC 3502 5187098 YP_001253269.1 CDS chiA NC_009495.1 837449 839302 D chitinase A 837449..839302 Clostridium botulinum A str. ATCC 3502 5187109 YP_001253270.1 CDS merP NC_009495.1 839668 839907 D heavy-metal-binding protein 839668..839907 Clostridium botulinum A str. ATCC 3502 5184984 YP_001253271.1 CDS CBO0730 NC_009495.1 840021 840353 R hypothetical protein complement(840021..840353) Clostridium botulinum A str. ATCC 3502 5184985 YP_001253272.1 CDS CBO0731 NC_009495.1 840441 840941 R hypothetical protein complement(840441..840941) Clostridium botulinum A str. ATCC 3502 5184986 YP_001253273.1 CDS CBO0732 NC_009495.1 841475 842083 R hypothetical protein complement(841475..842083) Clostridium botulinum A str. ATCC 3502 5184987 YP_001253274.1 CDS CBO0733 NC_009495.1 842176 842598 R DNA-binding protein complement(842176..842598) Clostridium botulinum A str. ATCC 3502 5184988 YP_001253275.1 CDS CBO0734 NC_009495.1 842742 842942 D DNA-binding protein 842742..842942 Clostridium botulinum A str. ATCC 3502 5184989 YP_001253276.1 CDS CBO0735 NC_009495.1 843044 844303 D phage replication protein 843044..844303 Clostridium botulinum A str. ATCC 3502 5187102 YP_001253277.1 CDS CBO0736 NC_009495.1 844322 844861 D RNA polymerase sigma factor 844322..844861 Clostridium botulinum A str. ATCC 3502 5187087 YP_001253278.1 CDS CBO0737 NC_009495.1 844947 845303 D hypothetical protein 844947..845303 Clostridium botulinum A str. ATCC 3502 5187063 YP_001253279.1 CDS CBO0738 NC_009495.1 845432 845623 D hypothetical protein 845432..845623 Clostridium botulinum A str. ATCC 3502 5187521 YP_001253280.1 CDS CBO0739 NC_009495.1 845867 846697 D hypothetical protein 845867..846697 Clostridium botulinum A str. ATCC 3502 5184994 YP_001253281.1 CDS CBO0740 NC_009495.1 846935 847156 D hypothetical protein 846935..847156 Clostridium botulinum A str. ATCC 3502 5184995 YP_001253282.1 CDS CBO0741 NC_009495.1 847176 847403 D hypothetical protein 847176..847403 Clostridium botulinum A str. ATCC 3502 5184996 YP_001253283.1 CDS CBO0742 NC_009495.1 847552 848256 D phage related N-acetylmuramoyl-L-alanine amidase 847552..848256 Clostridium botulinum A str. ATCC 3502 5184997 YP_001253284.1 CDS CBO0743 NC_009495.1 848293 848400 R hypothetical protein complement(848293..848400) Clostridium botulinum A str. ATCC 3502 5184998 YP_001253285.1 CDS CBO0746 NC_009495.1 849268 849510 D phage-like protein 849268..849510 Clostridium botulinum A str. ATCC 3502 5187257 YP_001253286.1 CDS CBO0747 NC_009495.1 849839 850567 D hypothetical protein 849839..850567 Clostridium botulinum A str. ATCC 3502 5185002 YP_001253287.1 CDS CBO0748 NC_009495.1 851059 851400 R Similar to an internal region of Bacillus cereus enterotoxin SWALL:Q9RMN6 (EMBL:AF192766) (419 aa) fasta scores: E(): 0.0082, 31.31 38d in 99 aa, and to C-terminal region of Bacillus anthracis prophage lambdaba01,N-acetylmuramoyl-L-alanine amidase, family 2 ba3767 SWALL:Q81XZ5 (EMBL:AE017035) (310 aa) fasta scores: E(): 1.2, 29.89 38d in 97 aa; hypothetical protein complement(851059..851400) Clostridium botulinum A str. ATCC 3502 5187350 YP_001253288.1 CDS CBO0750 NC_009495.1 852692 853669 R LysM domain-containing protein complement(852692..853669) Clostridium botulinum A str. ATCC 3502 5185005 YP_001253289.1 CDS arsC NC_009495.1 853934 854350 D arsenate reductase 853934..854350 Clostridium botulinum A str. ATCC 3502 5185006 YP_001253290.1 CDS CBO0752 NC_009495.1 854686 855129 R hypothetical protein complement(854686..855129) Clostridium botulinum A str. ATCC 3502 5185007 YP_001253291.1 CDS arsR NC_009495.1 855490 855813 D arsenical resistance operon repressor 855490..855813 Clostridium botulinum A str. ATCC 3502 5185008 YP_001253292.1 CDS arsD NC_009495.1 855835 856206 D arsenical resistence operon repressor ArsD 855835..856206 Clostridium botulinum A str. ATCC 3502 5187212 YP_001253293.1 CDS arsA NC_009495.1 856225 857970 D arsenical pump-driving ATPase ArsA 856225..857970 Clostridium botulinum A str. ATCC 3502 5185010 YP_001253294.1 CDS arsB NC_009495.1 858069 859139 D arsenical-resistance protein 858069..859139 Clostridium botulinum A str. ATCC 3502 5185011 YP_001253295.1 CDS CBO0759 NC_009495.1 860533 861081 D phosphoglycerate mutase 860533..861081 Clostridium botulinum A str. ATCC 3502 5185014 YP_001253296.1 CDS CBO0760 NC_009495.1 861589 862167 D TetR family transcriptional regulator 861589..862167 Clostridium botulinum A str. ATCC 3502 5187011 YP_001253297.1 CDS CBO0761 NC_009495.1 862177 862434 D hypothetical protein 862177..862434 Clostridium botulinum A str. ATCC 3502 5185016 YP_001253298.1 CDS CBO0762 NC_009495.1 862463 862651 D conjugative transposon protein 862463..862651 Clostridium botulinum A str. ATCC 3502 5185017 YP_001253299.1 CDS CBO0763 NC_009495.1 862906 863100 D DNA-binding protein 862906..863100 Clostridium botulinum A str. ATCC 3502 5185018 YP_001253300.1 CDS CBO0764 NC_009495.1 863104 863535 D hypothetical protein 863104..863535 Clostridium botulinum A str. ATCC 3502 5187705 YP_001253301.1 CDS CBO0765 NC_009495.1 863909 864844 D ABC transporter ATP-binding protein 863909..864844 Clostridium botulinum A str. ATCC 3502 5185020 YP_001253302.1 CDS CBO0766 NC_009495.1 864837 865973 D Highly similar to downstream CDS CBO0767 (89.9 id); ABC transporter permease 864837..865973 Clostridium botulinum A str. ATCC 3502 5185021 YP_001253303.1 CDS CBO0767 NC_009495.1 866207 867343 D Highly similar to upstream CDS CBO0766 (89.9 38d); ABC transporter permease 866207..867343 Clostridium botulinum A str. ATCC 3502 5185022 YP_001253304.1 CDS CBO0767A NC_009495.1 868034 868495 D hypothetical protein 868034..868495 Clostridium botulinum A str. ATCC 3502 5204261 YP_001253305.1 CDS CBO0768 NC_009495.1 868485 869459 D thymidylate synthase 868485..869459 Clostridium botulinum A str. ATCC 3502 5185023 YP_001253306.1 CDS CBO0769 NC_009495.1 869471 870229 D UbiE/COQ5 family methyltransferase 869471..870229 Clostridium botulinum A str. ATCC 3502 5185024 YP_001253307.1 CDS CBO0770 NC_009495.1 870275 871489 D thiaminase I 870275..871489 Clostridium botulinum A str. ATCC 3502 5187573 YP_001253308.1 CDS thiD2 NC_009495.1 871567 872394 D This CDS is also similar to CBO0451 (52.308 identity in 260 aa overlap); phosphomethylpyrimidine kinase 871567..872394 Clostridium botulinum A str. ATCC 3502 5185026 YP_001253309.1 CDS CBO0772 NC_009495.1 872566 872799 D hypothetical protein 872566..872799 Clostridium botulinum A str. ATCC 3502 5187347 YP_001253310.1 CDS CBO0773 NC_009495.1 873008 873472 R hypothetical protein complement(873008..873472) Clostridium botulinum A str. ATCC 3502 5187348 YP_001253311.1 CDS CBO0774 NC_009495.1 873868 874656 D ABC transporter ATP-binding protein 873868..874656 Clostridium botulinum A str. ATCC 3502 5185029 YP_001253312.1 CDS CBO0775 NC_009495.1 874659 876356 D hypothetical protein 874659..876356 Clostridium botulinum A str. ATCC 3502 5185030 YP_001253313.1 CDS CBO0776 NC_009495.1 876632 877324 D DNA-binding response regulator 876632..877324 Clostridium botulinum A str. ATCC 3502 5185031 YP_001253314.1 CDS CBO0777 NC_009495.1 877745 878665 D bacitracin ABC transporter ATP-binding protein 877745..878665 Clostridium botulinum A str. ATCC 3502 5185032 YP_001253315.1 CDS CBO0778 NC_009495.1 878665 879456 D hypothetical protein 878665..879456 Clostridium botulinum A str. ATCC 3502 5185033 YP_001253316.1 CDS CBO0779 NC_009495.1 879707 880564 D AraC family transcriptional regulator 879707..880564 Clostridium botulinum A str. ATCC 3502 5185034 YP_001253317.1 CDS CBO0780 NC_009495.1 880609 881514 D sensor histidine kinase 880609..881514 Clostridium botulinum A str. ATCC 3502 5185035 YP_001253318.1 CDS CBO0781 NC_009495.1 882469 883464 D hypothetical protein 882469..883464 Clostridium botulinum A str. ATCC 3502 5185036 YP_001253319.1 CDS CBO0782 NC_009495.1 883744 884769 D hypothetical protein 883744..884769 Clostridium botulinum A str. ATCC 3502 5187059 YP_001253320.1 CDS CBO0783 NC_009495.1 884953 885645 D ABC transporter ATP-binding protein 884953..885645 Clostridium botulinum A str. ATCC 3502 5185038 YP_001253321.1 CDS CBO0784 NC_009495.1 885632 888298 D ABC transporter permease 885632..888298 Clostridium botulinum A str. ATCC 3502 5185039 YP_001253322.1 CDS CBO0785 NC_009495.1 888494 888628 D hypothetical protein 888494..888628 Clostridium botulinum A str. ATCC 3502 5185040 YP_001253323.1 CDS CBO0786 NC_009495.1 888856 889569 D DNA-binding response regulator 888856..889569 Clostridium botulinum A str. ATCC 3502 5185041 YP_001253324.1 CDS CBO0787 NC_009495.1 889723 890985 D sensor histidine kinase 889723..890985 Clostridium botulinum A str. ATCC 3502 5185042 YP_001253325.1 CDS CBO0788 NC_009495.1 891175 891816 D hypothetical protein 891175..891816 Clostridium botulinum A str. ATCC 3502 5185043 YP_001253326.1 CDS CBO0789 NC_009495.1 891907 892095 R Also similar to CBO1236 (31.7 38d.).; small acid-soluble spore protein, H-type complement(891907..892095) Clostridium botulinum A str. ATCC 3502 5185044 YP_001253327.1 CDS CBO0790 NC_009495.1 892425 893204 D hypothetical protein 892425..893204 Clostridium botulinum A str. ATCC 3502 5185045 YP_001253328.1 CDS dapB NC_009495.1 893870 894667 D dihydrodipicolinate reductase 893870..894667 Clostridium botulinum A str. ATCC 3502 5187262 YP_001253329.1 CDS sseA NC_009495.1 894689 895528 D sulfurtransferase 894689..895528 Clostridium botulinum A str. ATCC 3502 5185047 YP_001253330.1 CDS CBO0793 NC_009495.1 896036 896905 R hypothetical protein complement(896036..896905) Clostridium botulinum A str. ATCC 3502 5185048 YP_001253331.1 CDS CBO0794 NC_009495.1 897205 897984 R hypothetical protein complement(897205..897984) Clostridium botulinum A str. ATCC 3502 5187885 YP_001253332.1 CDS CBO0795 NC_009495.1 898030 898320 R hypothetical protein complement(898030..898320) Clostridium botulinum A str. ATCC 3502 5185050 YP_001253333.1 CDS CBO0796 NC_009495.1 898812 898928 D hypothetical protein 898812..898928 Clostridium botulinum A str. ATCC 3502 5185051 YP_001253334.1 CDS CBO0797 NC_009495.1 898947 899204 D hypothetical protein 898947..899204 Clostridium botulinum A str. ATCC 3502 5187181 YP_001253335.1 CDS CBO0798 NC_009495.1 899498 900919 D flagellin 899498..900919 Clostridium botulinum A str. ATCC 3502 5185053 YP_001253336.1 CDS CBO0799 NC_009495.1 900996 901157 D hypothetical protein 900996..901157 Clostridium botulinum A str. ATCC 3502 5185054 YP_001253337.1 CDS ha70 NC_009495.1 901881 903761 R previously sequenced in Clostridium botulinum as Ha70 SWALL:Q8KHU9 (EMBL:AF461538) (626 aa) fasta scores: E(): 0, 100 38d in 626 aa; hemagglutinin component of the neurotoxin complex complement(901881..903761) Clostridium botulinum A str. ATCC 3502 5185056 YP_001253338.1 CDS ha-17 NC_009495.1 903775 904215 R Previously sequenced in Clostridium as botulinum Ha17 or Ha-17 SWALL:Q45878 (EMBL:L42537) (146 aa) fasta scores: E(): 4e-58, 100 38d in 146 aa; hemagglutinin component of the neurotoxin complex complement(903775..904215) Clostridium botulinum A str. ATCC 3502 5185057 YP_001253339.1 CDS ha-33 NC_009495.1 904278 905159 R Previously sequenced in Clostridium botulinum as Ha-33 protein Ha-33 or Ha33 SWALL:Q45871 (EMBL:X79104) (293 aa) fasta scores: E(): 4.2e-113, 100 38d in 293 aa; hemagglutinin component of the neurotoxin complex complement(904278..905159) Clostridium botulinum A str. ATCC 3502 5185058 YP_001253340.1 CDS botR NC_009495.1 905386 905922 D Previously sequenced as Clostridium botulinum hypothetical protein p-21 or botR SWALL:Q57176 (EMBL:X79104) (178 aa) fasta scores: E(): 9.6e-61, 100 38d in 178 aa; transcriptional regulator BotR, P-21 905386..905922 Clostridium botulinum A str. ATCC 3502 5185059 YP_001253341.1 CDS ant NC_009495.1 906084 909665 D Previously sequenced in Clostridium botulinum as type A progenitor toxin nontoxic-nonha Ant or NtnH SWALL:Q45914 (EMBL:D67030) (1193 aa) fasta scores: E(): 0,100 38d in 1193 aa; type A progenitor toxin nontoxic-nonha 906084..909665 Clostridium botulinum A str. ATCC 3502 5185060 YP_001253342.1 CDS atx NC_009495.1 909709 913599 D Similar to Clostridium botulinum botulinum neurotoxin type A precursor BotA or Bna or Atx SWALL:BXA1_CLOBO (SWALL:P10845) (1295 aa) fasta scores: E(): 0, 99.92 38d in 1295 aa; botulinum neurotoxin type A 909709..913599 Clostridium botulinum A str. ATCC 3502 5185061 YP_001253343.1 CDS CBO0810 NC_009495.1 914877 915599 D transposase for insertion sequence element IS904 914877..915599 Clostridium botulinum A str. ATCC 3502 5185065 YP_001253344.1 CDS CBO0811 NC_009495.1 915784 917181 D hypothetical protein 915784..917181 Clostridium botulinum A str. ATCC 3502 5185066 YP_001253345.1 CDS CBO0812 NC_009495.1 917517 918686 D amidohydrolase 917517..918686 Clostridium botulinum A str. ATCC 3502 5185067 YP_001253346.1 CDS CBO0813 NC_009495.1 919252 920553 D This CDS is also similar to CBO0814 (78.837 identity in 430 aa overlap).; Highly similar to adjacent CDS, CBO0814, (78.8 id); branched-chain amino acid transport system carrier II protein 919252..920553 Clostridium botulinum A str. ATCC 3502 5185068 YP_001253347.1 CDS CBO0814 NC_009495.1 920704 922020 D This CDS is also similar to CBO0813 (78.837 identity in 430 aa overlap).; Highly similar to adjacent CDS, CBO0813, (78.8 id); branched chain amino acid transport system carrier II protein 920704..922020 Clostridium botulinum A str. ATCC 3502 5185069 YP_001253348.1 CDS CBO0815 NC_009495.1 922099 924579 R Similar over its C-terminal region to several including Oceanobacillus iheyensis oligopeptide ABC transporter oligopeptide-binding protein ob2775 SWALL:Q8EMR6 (EMBL:AP004602) (524 aa) fasta scores: E(): 1.8e-24, 25.29 38d in 518 aa; methyl-accepting chemotaxis protein/ extracellular solute-binding protein, family 5 complement(922099..924579) Clostridium botulinum A str. ATCC 3502 5185070 YP_001253349.1 CDS feoA NC_009495.1 924802 925038 D ferrous iron transport protein A 924802..925038 Clostridium botulinum A str. ATCC 3502 5187133 YP_001253350.1 CDS feoB NC_009495.1 925183 925965 D Similar to the N-terminal region of Escherichia coli ferrous iron transport protein b feob or b3409 SWALL:FEOB_ECOLI (SWALL:P33650) (773 aa) fasta scores: E(): 8.3e-22, 41.2 38d in 216 aa; ferrous iron transport protein B 925183..925965 Clostridium botulinum A str. ATCC 3502 5185072 YP_001253351.1 CDS feoB' NC_009495.1 925962 927485 D Similar to the C-terminal region of Escherichia coli ferrous iron transport protein b feob or b3409 SWALL:FEOB_ECOLI (SWALL:P33650) (773 aa) fasta scores: E(): 1.4e-13, 25.42 38d in 476 aa; ferrous iron transport protein B 925962..927485 Clostridium botulinum A str. ATCC 3502 5185073 YP_001253352.1 CDS cobC NC_009495.1 928200 928814 D alpha-ribazole-5'-phosphate phosphatase 928200..928814 Clostridium botulinum A str. ATCC 3502 5185074 YP_001253353.1 CDS CBO0820 NC_009495.1 928950 930521 D exported protein 928950..930521 Clostridium botulinum A str. ATCC 3502 5185075 YP_001253354.1 CDS cobS NC_009495.1 930792 931538 D catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase 930792..931538 Clostridium botulinum A str. ATCC 3502 5185076 YP_001253355.1 CDS CBO0822 NC_009495.1 931996 932772 D hypothetical protein 931996..932772 Clostridium botulinum A str. ATCC 3502 5185077 YP_001253356.1 CDS CBO0823 NC_009495.1 933081 933362 D hypothetical protein 933081..933362 Clostridium botulinum A str. ATCC 3502 5185078 YP_001253357.1 CDS CBO0824 NC_009495.1 933493 933675 D hypothetical protein 933493..933675 Clostridium botulinum A str. ATCC 3502 5185079 YP_001253358.1 CDS CBO0825 NC_009495.1 933693 933941 D hypothetical protein 933693..933941 Clostridium botulinum A str. ATCC 3502 5185080 YP_001253359.1 CDS CBO0826 NC_009495.1 934510 935862 D hypothetical protein 934510..935862 Clostridium botulinum A str. ATCC 3502 5187357 YP_001253360.1 CDS CBO0827 NC_009495.1 936133 936486 D 6-pyruvoyl tetrahydrobiopterin synthase 936133..936486 Clostridium botulinum A str. ATCC 3502 5185082 YP_001253361.1 CDS dhpS NC_009495.1 936659 937777 D dihydropteroate synthase 936659..937777 Clostridium botulinum A str. ATCC 3502 5187036 YP_001253362.1 CDS CBO0829 NC_009495.1 937909 938160 D Similar to internal regions of several including Clostridium perfringens hypothetical protein Cpe1732 cpe1732 SWALL:Q8XJM4 (EMBL:AP003191) (548 aa) fasta scores: E(): 0.00013, 35.06 38d in 77 aa; hypothetical protein 937909..938160 Clostridium botulinum A str. ATCC 3502 5185084 YP_001253363.1 CDS folK NC_009495.1 938260 938715 D 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 938260..938715 Clostridium botulinum A str. ATCC 3502 5187260 YP_001253364.1 CDS CBO0831 NC_009495.1 938834 939274 D heat shock protein 938834..939274 Clostridium botulinum A str. ATCC 3502 5185086 YP_001253365.1 CDS CBO0832 NC_009495.1 939594 940946 D MerR family transcriptional regulator 939594..940946 Clostridium botulinum A str. ATCC 3502 5185087 YP_001253366.1 CDS CBO0833 NC_009495.1 941001 942176 D exopolysaccharide biosynthesis protein 941001..942176 Clostridium botulinum A str. ATCC 3502 5185088 YP_001253367.1 CDS degT NC_009495.1 942318 943439 D pleiotropic regulatory protein 942318..943439 Clostridium botulinum A str. ATCC 3502 5185089 YP_001253368.1 CDS CBO0835 NC_009495.1 944298 944792 D nitroimidazole resistance protein 944298..944792 Clostridium botulinum A str. ATCC 3502 5187506 YP_001253369.1 CDS CBO0836 NC_009495.1 945263 945775 D RNA polymerase sigma-70 factor, ECF family 945263..945775 Clostridium botulinum A str. ATCC 3502 5185091 YP_001253370.1 CDS CBO0837 NC_009495.1 945780 946943 D hypothetical protein 945780..946943 Clostridium botulinum A str. ATCC 3502 5185092 YP_001253371.1 CDS CBO0838 NC_009495.1 947235 947789 R flavoredoxin complement(947235..947789) Clostridium botulinum A str. ATCC 3502 5185093 YP_001253372.1 CDS CBO0839 NC_009495.1 947877 948005 D hypothetical protein 947877..948005 Clostridium botulinum A str. ATCC 3502 5185094 YP_001253373.1 CDS CBO0840 NC_009495.1 948108 948920 D This CDS is also similar to CBO0849 (93.333 identity in 270 aa overlap); non-heme chloroperoxidase 948108..948920 Clostridium botulinum A str. ATCC 3502 5185095 YP_001253374.1 CDS CBO0841 NC_009495.1 949220 949888 D cadmium resistance transporter CadD 949220..949888 Clostridium botulinum A str. ATCC 3502 5187327 YP_001253375.1 CDS CBO0842 NC_009495.1 950037 950453 D hypothetical protein 950037..950453 Clostridium botulinum A str. ATCC 3502 5185097 YP_001253376.1 CDS CBO0843 NC_009495.1 950650 951018 D transcription regulator AsnC 950650..951018 Clostridium botulinum A str. ATCC 3502 5185098 YP_001253377.1 CDS CBO0844 NC_009495.1 951337 952185 D Highly similar to CBO2182 (98.2 38d); hypothetical protein 951337..952185 Clostridium botulinum A str. ATCC 3502 5187020 YP_001253378.1 CDS CBO0845 NC_009495.1 952701 953495 R ABC transporter permease complement(952701..953495) Clostridium botulinum A str. ATCC 3502 5185100 YP_001253379.1 CDS CBO0846 NC_009495.1 953514 954431 R ABC transporter ATP-binding protein complement(953514..954431) Clostridium botulinum A str. ATCC 3502 5185101 YP_001253380.1 CDS CBO0847 NC_009495.1 954428 955549 R DNA-binding protein complement(954428..955549) Clostridium botulinum A str. ATCC 3502 5185102 YP_001253381.1 CDS CBO0848 NC_009495.1 955981 956328 D hypothetical protein 955981..956328 Clostridium botulinum A str. ATCC 3502 5185103 YP_001253382.1 CDS CBO0849 NC_009495.1 957013 957825 D This CDS is also similar to CBO0840 (93.333 identity in 270 aa overlap); non-heme chloroperoxidase 957013..957825 Clostridium botulinum A str. ATCC 3502 5185104 YP_001253383.1 CDS CBO0850 NC_009495.1 958349 958924 D GNAT family acetyltransferase 958349..958924 Clostridium botulinum A str. ATCC 3502 5185105 YP_001253384.1 CDS CBO0851 NC_009495.1 958982 959635 D pentapeptide repeat-containing protein 958982..959635 Clostridium botulinum A str. ATCC 3502 5185106 YP_001253385.1 CDS CBO0852 NC_009495.1 959905 960474 R NAD(P)H dehydrogenase complement(959905..960474) Clostridium botulinum A str. ATCC 3502 5187632 YP_001253386.1 CDS CBO0853 NC_009495.1 960492 961046 R iron-sulfur flavoprotein complement(960492..961046) Clostridium botulinum A str. ATCC 3502 5187630 YP_001253387.1 CDS CBO0854 NC_009495.1 961151 961477 R transcription regulator ArsR complement(961151..961477) Clostridium botulinum A str. ATCC 3502 5185109 YP_001253388.1 CDS CBO0855 NC_009495.1 961821 962648 R MerR family transcriptional regulator complement(961821..962648) Clostridium botulinum A str. ATCC 3502 5185110 YP_001253389.1 CDS CBO0856 NC_009495.1 962761 963378 D GNAT family acetyltransferase 962761..963378 Clostridium botulinum A str. ATCC 3502 5185111 YP_001253390.1 CDS CBO0857 NC_009495.1 963371 963526 D hypothetical protein 963371..963526 Clostridium botulinum A str. ATCC 3502 5185112 YP_001253391.1 CDS CBO0858 NC_009495.1 963584 964099 D hypothetical protein 963584..964099 Clostridium botulinum A str. ATCC 3502 5187081 YP_001253392.1 CDS CBO0859 NC_009495.1 964303 964686 D GNAT family acetyltransferase 964303..964686 Clostridium botulinum A str. ATCC 3502 5185114 YP_001253393.1 CDS CBO0860 NC_009495.1 965391 966092 R hypothetical protein complement(965391..966092) Clostridium botulinum A str. ATCC 3502 5185115 YP_001253394.1 CDS CBO0861 NC_009495.1 966367 966675 R transcriptional regulator complement(966367..966675) Clostridium botulinum A str. ATCC 3502 5185116 YP_001253395.1 CDS CBO0862 NC_009495.1 966804 967433 D nitroreductase 966804..967433 Clostridium botulinum A str. ATCC 3502 5185117 YP_001253396.1 CDS lipA NC_009495.1 967797 969239 D secreted lipase 967797..969239 Clostridium botulinum A str. ATCC 3502 5185118 YP_001253397.1 CDS oxdD NC_009495.1 969474 970682 R oxalate decarboxylase complement(969474..970682) Clostridium botulinum A str. ATCC 3502 5185119 YP_001253398.1 CDS CBO0865 NC_009495.1 970848 971426 R decarboxylase complement(970848..971426) Clostridium botulinum A str. ATCC 3502 5185120 YP_001253399.1 CDS CBO0866 NC_009495.1 971484 971939 R hypothetical protein complement(971484..971939) Clostridium botulinum A str. ATCC 3502 5187811 YP_001253400.1 CDS CBO0867 NC_009495.1 972053 972940 D LysR family transcriptional regulator 972053..972940 Clostridium botulinum A str. ATCC 3502 5187305 YP_001253401.1 CDS CBO0868 NC_009495.1 973213 973659 D acetyltransferase 973213..973659 Clostridium botulinum A str. ATCC 3502 5187090 YP_001253402.1 CDS CBO0869 NC_009495.1 973968 974213 R hypothetical protein complement(973968..974213) Clostridium botulinum A str. ATCC 3502 5187660 YP_001253403.1 CDS CBO0870 NC_009495.1 974310 974720 R hypothetical protein complement(974310..974720) Clostridium botulinum A str. ATCC 3502 5185125 YP_001253404.1 CDS CBO0871 NC_009495.1 974789 975163 D Similar to The C-terminal regions of several regulators including Escherichia coli, and Escherichia coli O157:H7 regulatory protein nsr nsr or b2163 or z3420 or ecs3055 SWALL:NSR_ECOLI (SWALL:P33023) (219 aa) fasta scores: E(): 0.029, 28.44 38d in 116 aa, and to Bacillus cereus catabolite gene activator bc3449 SWALL:Q81AV5 (EMBL:AE017009) (230 aa) fasta scores: E(): 1.3e-09,34.95 38d in 123 aa; hypothetical protein 974789..975163 Clostridium botulinum A str. ATCC 3502 5185126 YP_001253405.1 CDS CBO0872 NC_009495.1 975223 975645 R hypothetical protein complement(975223..975645) Clostridium botulinum A str. ATCC 3502 5188011 YP_001253406.1 CDS CBO0873 NC_009495.1 975768 976700 D hypothetical protein 975768..976700 Clostridium botulinum A str. ATCC 3502 5185128 YP_001253407.1 CDS CBO0874 NC_009495.1 976908 977378 R hypothetical protein complement(976908..977378) Clostridium botulinum A str. ATCC 3502 5185129 YP_001253408.1 CDS CBO0875 NC_009495.1 977378 978139 R hypothetical protein complement(977378..978139) Clostridium botulinum A str. ATCC 3502 5185130 YP_001253409.1 CDS def NC_009495.1 978820 979320 R peptide deformylase complement(978820..979320) Clostridium botulinum A str. ATCC 3502 5185131 YP_001253410.1 CDS CBO0877 NC_009495.1 979553 980989 D GntR family transcriptional regulator 979553..980989 Clostridium botulinum A str. ATCC 3502 5185132 YP_001253411.1 CDS CBO0878 NC_009495.1 981067 981585 R nitroreductase complement(981067..981585) Clostridium botulinum A str. ATCC 3502 5185133 YP_001253412.1 CDS CBO0879 NC_009495.1 981828 982634 R (Fe-S)-binding protein complement(981828..982634) Clostridium botulinum A str. ATCC 3502 5185134 YP_001253413.1 CDS licT NC_009495.1 983406 984239 D transcription antiterminator 983406..984239 Clostridium botulinum A str. ATCC 3502 5185135 YP_001253414.1 CDS bglC NC_009495.1 984364 986253 D PTS system beta-glucoside-specific transporter subunit IIABC 984364..986253 Clostridium botulinum A str. ATCC 3502 5185136 YP_001253415.1 CDS ascB NC_009495.1 986582 988003 D glycosyl hydrolase family protein 986582..988003 Clostridium botulinum A str. ATCC 3502 5185137 YP_001253416.1 CDS CBO0883 NC_009495.1 988122 988337 D hypothetical protein 988122..988337 Clostridium botulinum A str. ATCC 3502 5185138 YP_001253417.1 CDS mraY1 NC_009495.1 988539 989492 R Also similar to CBO1459 (62.14 38d); phospho-N-acetylmuramoyl-pentapeptide- transferase complement(988539..989492) Clostridium botulinum A str. ATCC 3502 5185139 YP_001253418.1 CDS CBO0885 NC_009495.1 989905 990765 D DNA-binding protein 989905..990765 Clostridium botulinum A str. ATCC 3502 5185140 YP_001253419.1 CDS CBO0886 NC_009495.1 991189 991623 D chloramphenicol acetyltransferase 991189..991623 Clostridium botulinum A str. ATCC 3502 5185141 YP_001253420.1 CDS CBO0887 NC_009495.1 991867 992247 D hypothetical protein 991867..992247 Clostridium botulinum A str. ATCC 3502 5185142 YP_001253421.1 CDS CBO0888 NC_009495.1 992600 993223 D hypothetical protein 992600..993223 Clostridium botulinum A str. ATCC 3502 5185143 YP_001253422.1 CDS cotA NC_009495.1 993825 995624 R spore coat protein complement(993825..995624) Clostridium botulinum A str. ATCC 3502 5187765 YP_001253423.1 CDS CBO0891 NC_009495.1 995788 995967 D hypothetical protein 995788..995967 Clostridium botulinum A str. ATCC 3502 5185146 YP_001253424.1 CDS CBO0892 NC_009495.1 996209 996598 R spore appendage protein complement(996209..996598) Clostridium botulinum A str. ATCC 3502 5185147 YP_001253425.1 CDS CBO0893 NC_009495.1 997008 997202 D hypothetical protein 997008..997202 Clostridium botulinum A str. ATCC 3502 5185148 YP_001253426.1 CDS CBO0894 NC_009495.1 997879 999111 R peptidyl-arginine deiminase complement(997879..999111) Clostridium botulinum A str. ATCC 3502 5185149 YP_001253427.1 CDS CBO0895 NC_009495.1 999408 1000016 D transcriptional regulator 999408..1000016 Clostridium botulinum A str. ATCC 3502 5185150 YP_001253428.1 CDS CBO0896 NC_009495.1 1000046 1000909 D drug/metabolite transporter DMT family 1000046..1000909 Clostridium botulinum A str. ATCC 3502 5187053 YP_001253429.1 CDS CBO0897 NC_009495.1 1001265 1001852 D hypothetical protein 1001265..1001852 Clostridium botulinum A str. ATCC 3502 5185152 YP_001253430.1 CDS CBO0898 NC_009495.1 1001933 1002310 R ErfK/YbiS/YcfS/YnhG family protein complement(1001933..1002310) Clostridium botulinum A str. ATCC 3502 5185153 YP_001253431.1 CDS CBO0899 NC_009495.1 1002484 1002813 R hypothetical protein complement(1002484..1002813) Clostridium botulinum A str. ATCC 3502 5187255 YP_001253432.1 CDS CBO0900 NC_009495.1 1003077 1003385 R .; Highly similar to CBO1594 (85.5 38d), CBO2273 (82.3 38d) and CBO2267 (85.5 0d); hypothetical protein complement(1003077..1003385) Clostridium botulinum A str. ATCC 3502 5185155 YP_001253433.1 CDS CBO0901 NC_009495.1 1003491 1003700 R Similar to internal regions of several including Fusobacterium nucleatum subsp. vincentii ATCC 49256 acetyltransferase fnv1635 SWALL:EAA24765 (EMBL:AABF01000017) (173 aa) fasta scores: E(): 1.1e-07,46.15 38d in 65 aa; hypothetical protein complement(1003491..1003700) Clostridium botulinum A str. ATCC 3502 5185156 YP_001253434.1 CDS CBO0902 NC_009495.1 1004066 1004836 D hypothetical protein 1004066..1004836 Clostridium botulinum A str. ATCC 3502 5185157 YP_001253435.1 CDS CBO0903 NC_009495.1 1005375 1006982 D hypothetical protein 1005375..1006982 Clostridium botulinum A str. ATCC 3502 5185158 YP_001253436.1 CDS CBO0904 NC_009495.1 1007346 1009706 R ABC transporter ATP-binding protein/permease complement(1007346..1009706) Clostridium botulinum A str. ATCC 3502 5185159 YP_001253437.1 CDS CBO0905 NC_009495.1 1009866 1010537 D DNA-binding response regulator 1009866..1010537 Clostridium botulinum A str. ATCC 3502 5187186 YP_001253438.1 CDS CBO0906 NC_009495.1 1010534 1011565 D two component sensor kinase 1010534..1011565 Clostridium botulinum A str. ATCC 3502 5185161 YP_001253439.1 CDS CBO0907 NC_009495.1 1011917 1012465 D BioY family protein 1011917..1012465 Clostridium botulinum A str. ATCC 3502 5187458 YP_001253440.1 CDS CBO0908 NC_009495.1 1012870 1014576 D hypothetical protein 1012870..1014576 Clostridium botulinum A str. ATCC 3502 5187065 YP_001253441.1 CDS CBO0909 NC_009495.1 1014918 1015463 D GNAT family acetyltransferase 1014918..1015463 Clostridium botulinum A str. ATCC 3502 5185164 YP_001253442.1 CDS CBO0910 NC_009495.1 1015542 1017149 D Similar over its C-terminal region to several LexA repressors including Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri lexa repressor SWALL:LEXA_ECOLI (SWALL:P03033) (202 aa) fasta scores: E(): 2.5e-07, 31.78 38d in 129 aa; LexA repressor 1015542..1017149 Clostridium botulinum A str. ATCC 3502 5185165 YP_001253443.1 CDS cobU NC_009495.1 1017427 1017984 D catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP; adenosylcobinamide kinase 1017427..1017984 Clostridium botulinum A str. ATCC 3502 5185166 YP_001253444.1 CDS CBO0912 NC_009495.1 1017988 1018116 R hypothetical protein complement(1017988..1018116) Clostridium botulinum A str. ATCC 3502 5185167 YP_001253445.1 CDS CBO0913 NC_009495.1 1018406 1019170 R MerR family transcriptional regulator complement(1018406..1019170) Clostridium botulinum A str. ATCC 3502 5185168 YP_001253446.1 CDS cbiP NC_009495.1 1019876 1021357 D catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 1019876..1021357 Clostridium botulinum A str. ATCC 3502 5187566 YP_001253447.1 CDS cobD NC_009495.1 1021359 1022321 D CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 1021359..1022321 Clostridium botulinum A str. ATCC 3502 5185170 YP_001253448.1 CDS cobD NC_009495.1 1022540 1023628 D aminotransferase 1022540..1023628 Clostridium botulinum A str. ATCC 3502 5185171 YP_001253449.1 CDS cbiM NC_009495.1 1023902 1024621 D catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM 1023902..1024621 Clostridium botulinum A str. ATCC 3502 5185172 YP_001253450.1 CDS cbiN NC_009495.1 1024625 1024924 D cobalt ABC transporter permease 1024625..1024924 Clostridium botulinum A str. ATCC 3502 5187105 YP_001253451.1 CDS cbiQ NC_009495.1 1024902 1025585 D cobalt ABC transporter permease 1024902..1025585 Clostridium botulinum A str. ATCC 3502 5185173 YP_001253452.1 CDS CBO0919 NC_009495.1 1025994 1026656 D catalyzes the formation of siroheme from precorrin-2; precorrin-2 dehydrogenase 1025994..1026656 Clostridium botulinum A str. ATCC 3502 5185174 YP_001253453.1 CDS hemC NC_009495.1 1026625 1027497 D transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 1026625..1027497 Clostridium botulinum A str. ATCC 3502 5185175 YP_001253454.1 CDS hemD NC_009495.1 1027633 1029093 D uroporphyrinogen III synthase/methyltransferase 1027633..1029093 Clostridium botulinum A str. ATCC 3502 5185176 YP_001253455.1 CDS CBO0922 NC_009495.1 1029238 1029420 D hypothetical protein 1029238..1029420 Clostridium botulinum A str. ATCC 3502 5185177 YP_001253456.1 CDS hemB NC_009495.1 1029682 1030656 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1029682..1030656 Clostridium botulinum A str. ATCC 3502 5185178 YP_001253457.1 CDS cbiA NC_009495.1 1030777 1032099 D responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 1030777..1032099 Clostridium botulinum A str. ATCC 3502 5187985 YP_001253458.1 CDS cbiC NC_009495.1 1032124 1032750 D catalyzes the interconversion of precorrin-8X and cobyrinic acid; precorrin-8X methylmutase 1032124..1032750 Clostridium botulinum A str. ATCC 3502 5185180 YP_001253459.1 CDS CBO0926 NC_009495.1 1032944 1033786 D CAAX amino terminal protease 1032944..1033786 Clostridium botulinum A str. ATCC 3502 5185181 YP_001253460.1 CDS CBO0927 NC_009495.1 1033962 1034705 D hypothetical protein 1033962..1034705 Clostridium botulinum A str. ATCC 3502 5185182 YP_001253461.1 CDS CBO0928 NC_009495.1 1035011 1035619 D phosphohydrolase 1035011..1035619 Clostridium botulinum A str. ATCC 3502 5185183 YP_001253462.1 CDS CBO0929 NC_009495.1 1035675 1036043 D hypothetical protein 1035675..1036043 Clostridium botulinum A str. ATCC 3502 5185184 YP_001253463.1 CDS CBO0930 NC_009495.1 1036165 1037439 D Similar to N-terminal regions of many MerR-family transcriptional regulators including Clostridium acetobutylicum transcriptional regulator, merr family cap0178 SWALL:Q97TD4 (EMBL:AE001438) (123 aa) fasta scores: E(): 0.00041, 36.97 38d in 119 aa; MerR family transcriptional regulator 1036165..1037439 Clostridium botulinum A str. ATCC 3502 5185185 YP_001253464.1 CDS CBO0931 NC_009495.1 1037516 1037944 D GNAT family acetyltransferase 1037516..1037944 Clostridium botulinum A str. ATCC 3502 5185186 YP_001253465.1 CDS CBO0932 NC_009495.1 1038195 1038896 D hypothetical protein 1038195..1038896 Clostridium botulinum A str. ATCC 3502 5187803 YP_001253466.1 CDS CBO0933 NC_009495.1 1038926 1039447 D nitroreductase 1038926..1039447 Clostridium botulinum A str. ATCC 3502 5185188 YP_001253467.1 CDS CBO0934 NC_009495.1 1039499 1039810 D hypothetical protein 1039499..1039810 Clostridium botulinum A str. ATCC 3502 5185189 YP_001253468.1 CDS CBO0935 NC_009495.1 1039918 1040451 D hypothetical protein 1039918..1040451 Clostridium botulinum A str. ATCC 3502 5185190 YP_001253469.1 CDS cbiD NC_009495.1 1040525 1041604 D Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase 1040525..1041604 Clostridium botulinum A str. ATCC 3502 5185191 YP_001253470.1 CDS cbiE NC_009495.1 1041781 1042431 D precorrin-6y C5,15-methyltransferase subunit CbiE 1041781..1042431 Clostridium botulinum A str. ATCC 3502 5185192 YP_001253471.1 CDS CBO0938 NC_009495.1 1042658 1043161 D CAAX amino terminal protease 1042658..1043161 Clostridium botulinum A str. ATCC 3502 5185193 YP_001253472.1 CDS cbiT NC_009495.1 1043354 1043929 D precorrin-6Y C5,15-methyltransferase subunit CbiT 1043354..1043929 Clostridium botulinum A str. ATCC 3502 5185194 YP_001253473.1 CDS CBO0940 NC_009495.1 1043929 1044360 D hypothetical protein 1043929..1044360 Clostridium botulinum A str. ATCC 3502 5185195 YP_001253474.1 CDS CBO0941 NC_009495.1 1044396 1044947 D hypothetical protein 1044396..1044947 Clostridium botulinum A str. ATCC 3502 5185196 YP_001253475.1 CDS CBO0941A NC_009495.1 1044995 1045309 D hypothetical protein 1044995..1045309 Clostridium botulinum A str. ATCC 3502 5204262 YP_001253476.1 CDS CBO0942 NC_009495.1 1045415 1045636 D hypothetical protein 1045415..1045636 Clostridium botulinum A str. ATCC 3502 5185197 YP_001253477.1 CDS CBO0943 NC_009495.1 1045679 1046131 D hypothetical protein 1045679..1046131 Clostridium botulinum A str. ATCC 3502 5187027 YP_001253478.1 CDS CBO0944 NC_009495.1 1046191 1046532 D hypothetical protein 1046191..1046532 Clostridium botulinum A str. ATCC 3502 5187156 YP_001253479.1 CDS CBO0945 NC_009495.1 1046652 1047191 D isochorismatase 1046652..1047191 Clostridium botulinum A str. ATCC 3502 5185200 YP_001253480.1 CDS cbiL NC_009495.1 1047486 1048202 D catalyzes the formation of precorrin-3A from precorrin-2; cobalt-precorrin-2 C(20)-methyltransferase 1047486..1048202 Clostridium botulinum A str. ATCC 3502 5185201 YP_001253481.1 CDS cbiF NC_009495.1 1048221 1048985 D precorrin-4 C(11)-methyltransferase 1048221..1048985 Clostridium botulinum A str. ATCC 3502 5185202 YP_001253482.1 CDS cbiG NC_009495.1 1049276 1050328 D cobalamin biosynthesis protein CbiG 1049276..1050328 Clostridium botulinum A str. ATCC 3502 5185203 YP_001253483.1 CDS cbiH NC_009495.1 1050486 1051217 D precorrin-3B C(17)-methyltransferase 1050486..1051217 Clostridium botulinum A str. ATCC 3502 5185204 YP_001253484.1 CDS cbiJ NC_009495.1 1051351 1052118 D CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase 1051351..1052118 Clostridium botulinum A str. ATCC 3502 5185205 YP_001253485.1 CDS CBO0951 NC_009495.1 1052198 1052686 D hypothetical protein 1052198..1052686 Clostridium botulinum A str. ATCC 3502 5185206 YP_001253486.1 CDS cbiK NC_009495.1 1052862 1053644 D anaerobic sirohydrochlorin cobaltochelatase 1052862..1053644 Clostridium botulinum A str. ATCC 3502 5185207 YP_001253487.1 CDS pduX NC_009495.1 1053657 1054496 D kinase 1053657..1054496 Clostridium botulinum A str. ATCC 3502 5185208 YP_001253488.1 CDS btuR NC_009495.1 1054644 1055165 D catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase 1054644..1055165 Clostridium botulinum A str. ATCC 3502 5185209 YP_001253489.1 CDS CBO0955 NC_009495.1 1055400 1056107 D CRP family transcriptional regulator 1055400..1056107 Clostridium botulinum A str. ATCC 3502 5185210 YP_001253490.1 CDS nirC NC_009495.1 1056197 1056961 D formate/nitrate transporter 1056197..1056961 Clostridium botulinum A str. ATCC 3502 5185211 YP_001253491.1 CDS asrA NC_009495.1 1056981 1058009 D anaerobic sulfite reductase subunit A 1056981..1058009 Clostridium botulinum A str. ATCC 3502 5185212 YP_001253492.1 CDS asrB NC_009495.1 1057996 1058793 D with AsrAC catalyzes the reduction of sulfite to hydrogen sulfide; anaerobic sulfite reductase subunit B 1057996..1058793 Clostridium botulinum A str. ATCC 3502 5185213 YP_001253493.1 CDS asrC NC_009495.1 1058806 1059771 D anaerobic sulfite reductase subunit C 1058806..1059771 Clostridium botulinum A str. ATCC 3502 5185214 YP_001253494.1 CDS CBO0960 NC_009495.1 1060125 1061147 D molybdopterin biosynthesis protein 1060125..1061147 Clostridium botulinum A str. ATCC 3502 5185215 YP_001253495.1 CDS modA NC_009495.1 1061459 1062259 D molybdate-binding periplasmic protein precursor 1061459..1062259 Clostridium botulinum A str. ATCC 3502 5185216 YP_001253496.1 CDS modB NC_009495.1 1062279 1063061 D molybdenum ABC transporter permease 1062279..1063061 Clostridium botulinum A str. ATCC 3502 5185217 YP_001253497.1 CDS CBO0963 NC_009495.1 1063076 1063774 D molybdenum ABC transporter ATP-binding protein 1063076..1063774 Clostridium botulinum A str. ATCC 3502 5185218 YP_001253498.1 CDS CBO0964 NC_009495.1 1063758 1064486 D Similar to the C-terminal region of Methanobacterium thermoautotrophicum hypothetical protein Mth922 mth922 SWALL:O27005 (EMBL:AE000867) (111 aa) fasta scores: E(): 1.1e-09, 41.74 38d in 103 aa; hypothetical protein 1063758..1064486 Clostridium botulinum A str. ATCC 3502 5185219 YP_001253499.1 CDS CBO0965 NC_009495.1 1064605 1064952 R hypothetical protein complement(1064605..1064952) Clostridium botulinum A str. ATCC 3502 5185220 YP_001253500.1 CDS CBO0966 NC_009495.1 1065317 1066336 D hypothetical protein 1065317..1066336 Clostridium botulinum A str. ATCC 3502 5185221 YP_001253501.1 CDS CBO0967 NC_009495.1 1066357 1067244 D ABC transporter ATP-binding protein 1066357..1067244 Clostridium botulinum A str. ATCC 3502 5185222 YP_001253502.1 CDS CBO0968 NC_009495.1 1067248 1068024 D hypothetical protein 1067248..1068024 Clostridium botulinum A str. ATCC 3502 5187380 YP_001253503.1 CDS CBO0970 NC_009495.1 1068669 1069391 D DNA-binding response regulator 1068669..1069391 Clostridium botulinum A str. ATCC 3502 5187541 YP_001253504.1 CDS CBO0971 NC_009495.1 1069381 1070802 D sensor histidine kinase 1069381..1070802 Clostridium botulinum A str. ATCC 3502 5185226 YP_001253505.1 CDS fecE NC_009495.1 1071180 1071950 R iron ABC transporter ATP-binding protein complement(1071180..1071950) Clostridium botulinum A str. ATCC 3502 5185227 YP_001253506.1 CDS CBO0973 NC_009495.1 1071951 1073030 R iron chelate uptake ABC transporter FeCT family, permease complement(1071951..1073030) Clostridium botulinum A str. ATCC 3502 5185228 YP_001253507.1 CDS CBO0974 NC_009495.1 1073031 1074053 R iron chelate uptake ABC transporter solute-binding protein complement(1073031..1074053) Clostridium botulinum A str. ATCC 3502 5185229 YP_001253508.1 CDS dhaK NC_009495.1 1074611 1076371 R in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone; dihydroxyacetone kinase complement(1074611..1076371) Clostridium botulinum A str. ATCC 3502 5185230 YP_001253509.1 CDS gldA NC_009495.1 1076382 1077512 R forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; glycerol dehydrogenase complement(1076382..1077512) Clostridium botulinum A str. ATCC 3502 5185231 YP_001253510.1 CDS CBO0979 NC_009495.1 1079238 1079414 D Similar to the C-terminal region of Clostridium tetani hypothetical protein ctp46 SWALL:Q899W9 (EMBL:AF528097) (146 aa) fasta scores: E(): 1.7e-10,59.64 38d in 57 aa; hypothetical protein 1079238..1079414 Clostridium botulinum A str. ATCC 3502 5185234 YP_001253511.1 CDS CBO0980 NC_009495.1 1079449 1079913 D GNAT family acetyltransferase 1079449..1079913 Clostridium botulinum A str. ATCC 3502 5185235 YP_001253512.1 CDS CBO0981 NC_009495.1 1079940 1080383 D GNAT family acetyltransferase 1079940..1080383 Clostridium botulinum A str. ATCC 3502 5185236 YP_001253513.1 CDS CBO0982 NC_009495.1 1080536 1081129 D hypothetical protein 1080536..1081129 Clostridium botulinum A str. ATCC 3502 5185237 YP_001253514.1 CDS CBO0983 NC_009495.1 1081192 1081395 D Similar to the C-terminal region of Bacteroides thetaiotaomicron hypothetical protein bt2376 SWALL:Q8A566 (EMBL:AE016935) (178 aa) fasta scores: E(): 0.00026,32.25 38d in 62 aa; hypothetical protein 1081192..1081395 Clostridium botulinum A str. ATCC 3502 5185238 YP_001253515.1 CDS dkgA NC_009495.1 1081513 1082358 D oxidoreductase, aldo/keto reductase 1081513..1082358 Clostridium botulinum A str. ATCC 3502 5185239 YP_001253516.1 CDS CBO0985 NC_009495.1 1082459 1082782 D TfoX domain-containing protein 1082459..1082782 Clostridium botulinum A str. ATCC 3502 5187391 YP_001253517.1 CDS CBO0986 NC_009495.1 1082828 1083682 D GNAT family acetyltransferase 1082828..1083682 Clostridium botulinum A str. ATCC 3502 5185241 YP_001253518.1 CDS CBO0987 NC_009495.1 1083892 1084206 D PadR-family transcriptional regulator 1083892..1084206 Clostridium botulinum A str. ATCC 3502 5185242 YP_001253519.1 CDS CBO0988 NC_009495.1 1084223 1084843 D hypothetical protein 1084223..1084843 Clostridium botulinum A str. ATCC 3502 5187864 YP_001253520.1 CDS CBO0989 NC_009495.1 1084978 1085472 D hypothetical protein 1084978..1085472 Clostridium botulinum A str. ATCC 3502 5185244 YP_001253521.1 CDS CBO0990 NC_009495.1 1085535 1085651 D hypothetical protein 1085535..1085651 Clostridium botulinum A str. ATCC 3502 5185245 YP_001253522.1 CDS add NC_009495.1 1086105 1087112 R catalyzes the formation of inosine from adenosine; adenosine deaminase complement(1086105..1087112) Clostridium botulinum A str. ATCC 3502 5185246 YP_001253523.1 CDS CBO0992 NC_009495.1 1088016 1090184 D This CDS is also similar to CBO0993 (37.812 identity in 722 aa overlap) and to CBO2927 (34.488 identity in 722 aa overlap).; phage infection protein 1088016..1090184 Clostridium botulinum A str. ATCC 3502 5185247 YP_001253524.1 CDS CBO0993 NC_009495.1 1090210 1092369 D This CDS is also similar to CBO0992 (37.812 identity in 722 aa overlap) and to CBO2927 (34.669 identity in 724 aa overlap).; phage infection protein 1090210..1092369 Clostridium botulinum A str. ATCC 3502 5185248 YP_001253525.1 CDS CBO0993A NC_009495.1 1092730 1093032 R hypothetical protein complement(1092730..1093032) Clostridium botulinum A str. ATCC 3502 5204263 YP_001253526.1 CDS CBO0994 NC_009495.1 1093223 1093978 D hypothetical protein 1093223..1093978 Clostridium botulinum A str. ATCC 3502 5185249 YP_001253527.1 CDS recQ NC_009495.1 1094222 1096351 D ATP-dependent DNA helicase RecQ 1094222..1096351 Clostridium botulinum A str. ATCC 3502 5185250 YP_001253528.1 CDS CBO0996 NC_009495.1 1096523 1096954 D ferritin 1096523..1096954 Clostridium botulinum A str. ATCC 3502 5185251 YP_001253529.1 CDS CBO0997 NC_009495.1 1097237 1097782 R phosphodiesterase complement(1097237..1097782) Clostridium botulinum A str. ATCC 3502 5185252 YP_001253530.1 CDS CBO0998 NC_009495.1 1098419 1098802 D response regulator 1098419..1098802 Clostridium botulinum A str. ATCC 3502 5185253 YP_001253531.1 CDS CBO0999 NC_009495.1 1098917 1101391 D hypothetical protein 1098917..1101391 Clostridium botulinum A str. ATCC 3502 5185254 YP_001253532.1 CDS CBO1000 NC_009495.1 1101838 1102053 D hypothetical protein 1101838..1102053 Clostridium botulinum A str. ATCC 3502 5185255 YP_001253533.1 CDS CBO1001 NC_009495.1 1102055 1102873 D hypothetical protein 1102055..1102873 Clostridium botulinum A str. ATCC 3502 5185256 YP_001253534.1 CDS nrdG NC_009495.1 1102873 1103466 D anaerobic ribonucleoside-triphosphate reductase activating protein 1102873..1103466 Clostridium botulinum A str. ATCC 3502 5185257 YP_001253535.1 CDS CBO1003 NC_009495.1 1103480 1105153 D ATPase AAA 1103480..1105153 Clostridium botulinum A str. ATCC 3502 5185258 YP_001253536.1 CDS CBO1004 NC_009495.1 1105168 1105938 D hypothetical protein 1105168..1105938 Clostridium botulinum A str. ATCC 3502 5185259 YP_001253537.1 CDS glcA NC_009495.1 1106422 1107945 D L-lactate permease 1106422..1107945 Clostridium botulinum A str. ATCC 3502 5185260 YP_001253538.1 CDS CBO1006 NC_009495.1 1107974 1109248 D hypothetical protein 1107974..1109248 Clostridium botulinum A str. ATCC 3502 5185261 YP_001253539.1 CDS etfB NC_009495.1 1109291 1110079 D electron transfer flavoprotein subunit beta/FixA family protein 1109291..1110079 Clostridium botulinum A str. ATCC 3502 5185262 YP_001253540.1 CDS etfB NC_009495.1 1110111 1111313 D electron transfer flavoprotein subunit alpha/FixB family protein 1110111..1111313 Clostridium botulinum A str. ATCC 3502 5185263 YP_001253541.1 CDS glcD NC_009495.1 1111374 1112771 D glycolate oxidase 1111374..1112771 Clostridium botulinum A str. ATCC 3502 5185264 YP_001253542.1 CDS CBO1011 NC_009495.1 1113290 1114198 D lipoprotein 1113290..1114198 Clostridium botulinum A str. ATCC 3502 5185266 YP_001253543.1 CDS CBO1012 NC_009495.1 1114394 1114864 D MarR family transcriptional regulator 1114394..1114864 Clostridium botulinum A str. ATCC 3502 5185267 YP_001253544.1 CDS CBO1013 NC_009495.1 1114866 1115411 D cyclase 1114866..1115411 Clostridium botulinum A str. ATCC 3502 5185268 YP_001253545.1 CDS CBO1014 NC_009495.1 1115712 1116896 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(1115712..1116896) Clostridium botulinum A str. ATCC 3502 5185269 YP_001253546.1 CDS CBO1015 NC_009495.1 1117825 1118403 R cyclase complement(1117825..1118403) Clostridium botulinum A str. ATCC 3502 5185270 YP_001253547.1 CDS CBO1016 NC_009495.1 1118562 1119086 D MarR family transcriptional regulator 1118562..1119086 Clostridium botulinum A str. ATCC 3502 5185271 YP_001253548.1 CDS CBO1017 NC_009495.1 1119389 1120210 D MerR family transcriptional regulator 1119389..1120210 Clostridium botulinum A str. ATCC 3502 5185272 YP_001253549.1 CDS CBO1018 NC_009495.1 1120425 1121123 D B3/4 domain-containing protein 1120425..1121123 Clostridium botulinum A str. ATCC 3502 5187698 YP_001253550.1 CDS aspC NC_009495.1 1121388 1122677 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(1121388..1122677) Clostridium botulinum A str. ATCC 3502 5187162 YP_001253551.1 CDS CBO1020 NC_009495.1 1123222 1123602 D hypothetical protein 1123222..1123602 Clostridium botulinum A str. ATCC 3502 5185275 YP_001253552.1 CDS CBO1021 NC_009495.1 1123762 1124376 D TetR family transcriptional regulator 1123762..1124376 Clostridium botulinum A str. ATCC 3502 5185276 YP_001253553.1 CDS CBO1022 NC_009495.1 1124392 1124880 D hypothetical protein 1124392..1124880 Clostridium botulinum A str. ATCC 3502 5185277 YP_001253554.1 CDS CBO1023 NC_009495.1 1124987 1125676 R HAD-superfamily hydrolase complement(1124987..1125676) Clostridium botulinum A str. ATCC 3502 5185278 YP_001253555.1 CDS CBO1024 NC_009495.1 1125987 1126676 D cyclic nucleotide-binding regulatory protein 1125987..1126676 Clostridium botulinum A str. ATCC 3502 5185279 YP_001253556.1 CDS CBO1025 NC_009495.1 1126794 1127378 R DJ-1/PfpI family protein complement(1126794..1127378) Clostridium botulinum A str. ATCC 3502 5185280 YP_001253557.1 CDS CBO1026 NC_009495.1 1127534 1128427 D LysR family transcriptional regulator 1127534..1128427 Clostridium botulinum A str. ATCC 3502 5185281 YP_001253558.1 CDS CBO1027 NC_009495.1 1128561 1129319 D hypothetical protein 1128561..1129319 Clostridium botulinum A str. ATCC 3502 5185282 YP_001253559.1 CDS CBO1028 NC_009495.1 1129864 1130082 D ferrous iron transport protein 1129864..1130082 Clostridium botulinum A str. ATCC 3502 5185283 YP_001253560.1 CDS feoA NC_009495.1 1130099 1130320 D ferrous iron transport protein A 1130099..1130320 Clostridium botulinum A str. ATCC 3502 5185284 YP_001253561.1 CDS feoB NC_009495.1 1130352 1132508 D ferrous iron transport protein B 1130352..1132508 Clostridium botulinum A str. ATCC 3502 5185285 YP_001253562.1 CDS CBO1031 NC_009495.1 1132529 1132675 D hypothetical protein 1132529..1132675 Clostridium botulinum A str. ATCC 3502 5185286 YP_001253563.1 CDS CBO1032 NC_009495.1 1133070 1133507 R acetyltransferase complement(1133070..1133507) Clostridium botulinum A str. ATCC 3502 5185287 YP_001253564.1 CDS CBO1033 NC_009495.1 1133974 1134774 D D-alanyl-D-alanine carboxypeptidase 1133974..1134774 Clostridium botulinum A str. ATCC 3502 5185288 YP_001253565.1 CDS tlp NC_009495.1 1135073 1135300 D small acid-soluble spore protein Tlp 1135073..1135300 Clostridium botulinum A str. ATCC 3502 5185289 YP_001253566.1 CDS CBO1035 NC_009495.1 1135518 1136204 D DNA-binding response regulator 1135518..1136204 Clostridium botulinum A str. ATCC 3502 5185290 YP_001253567.1 CDS CBO1036 NC_009495.1 1136205 1137560 D sensor histidine kinase 1136205..1137560 Clostridium botulinum A str. ATCC 3502 5185291 YP_001253568.1 CDS CBO1037 NC_009495.1 1137664 1137798 D hypothetical protein 1137664..1137798 Clostridium botulinum A str. ATCC 3502 5185292 YP_001253569.1 CDS cypC NC_009495.1 1138095 1139354 D cytochrome P450 1138095..1139354 Clostridium botulinum A str. ATCC 3502 5185293 YP_001253570.1 CDS CBO1039 NC_009495.1 1139494 1141302 R heavy metal-associated domain-containing protein complement(1139494..1141302) Clostridium botulinum A str. ATCC 3502 5185294 YP_001253571.1 CDS CBO1040 NC_009495.1 1141839 1142075 D hypothetical protein 1141839..1142075 Clostridium botulinum A str. ATCC 3502 5185295 YP_001253572.1 CDS CBO1041 NC_009495.1 1142345 1143046 D DNA-binding response regulator 1142345..1143046 Clostridium botulinum A str. ATCC 3502 5185296 YP_001253573.1 CDS CBO1042 NC_009495.1 1143046 1144452 D sensor histidine kinase 1143046..1144452 Clostridium botulinum A str. ATCC 3502 5185297 YP_001253574.1 CDS CBO1043 NC_009495.1 1144792 1145478 R hypothetical protein complement(1144792..1145478) Clostridium botulinum A str. ATCC 3502 5185298 YP_001253575.1 CDS CBO1044 NC_009495.1 1145714 1146472 R AraC family transcriptional regulator complement(1145714..1146472) Clostridium botulinum A str. ATCC 3502 5185299 YP_001253576.1 CDS CBO1045 NC_009495.1 1146718 1147671 D iron chelate uptake ABC transporter FeCT family, permease 1146718..1147671 Clostridium botulinum A str. ATCC 3502 5185300 YP_001253577.1 CDS CBO1045A NC_009495.1 1147661 1148611 D iron ABC transporter permease 1147661..1148611 Clostridium botulinum A str. ATCC 3502 5204264 YP_001253578.1 CDS CBO1046 NC_009495.1 1148608 1149363 D iron ABC transporter ATP-binding protein 1148608..1149363 Clostridium botulinum A str. ATCC 3502 5185301 YP_001253579.1 CDS CBO1047 NC_009495.1 1149437 1150381 D iron ABC transporter substrate-binding protein 1149437..1150381 Clostridium botulinum A str. ATCC 3502 5185302 YP_001253580.1 CDS CBO1048 NC_009495.1 1150438 1150566 D hypothetical protein 1150438..1150566 Clostridium botulinum A str. ATCC 3502 5185303 YP_001253581.1 CDS CBO1049 NC_009495.1 1150577 1151584 D AraC family transcriptional regulator 1150577..1151584 Clostridium botulinum A str. ATCC 3502 5185304 YP_001253582.1 CDS CBO1050 NC_009495.1 1152099 1153901 D ABC transporter permease ATP-binding protein 1152099..1153901 Clostridium botulinum A str. ATCC 3502 5185305 YP_001253583.1 CDS CBO1051 NC_009495.1 1153903 1155618 D ABC transporter ATP-binding protein 1153903..1155618 Clostridium botulinum A str. ATCC 3502 5185306 YP_001253584.1 CDS CBO1052 NC_009495.1 1155823 1157196 R sensor histidine kinase complement(1155823..1157196) Clostridium botulinum A str. ATCC 3502 5185307 YP_001253585.1 CDS CBO1053 NC_009495.1 1157199 1157906 R DNA-binding response regulator complement(1157199..1157906) Clostridium botulinum A str. ATCC 3502 5185308 YP_001253586.1 CDS CBO1054 NC_009495.1 1157994 1158869 R hypothetical protein complement(1157994..1158869) Clostridium botulinum A str. ATCC 3502 5185309 YP_001253587.1 CDS CBO1056 NC_009495.1 1159962 1163123 D cell surface protein 1159962..1163123 Clostridium botulinum A str. ATCC 3502 5185311 YP_001253588.1 CDS chiD NC_009495.1 1163311 1164810 D extracellular exochitinase 1163311..1164810 Clostridium botulinum A str. ATCC 3502 5185312 YP_001253589.1 CDS CBO1058 NC_009495.1 1165137 1167179 D hypothetical protein 1165137..1167179 Clostridium botulinum A str. ATCC 3502 5185313 YP_001253590.1 CDS CBO1059 NC_009495.1 1167503 1168498 D hypothetical protein 1167503..1168498 Clostridium botulinum A str. ATCC 3502 5185314 YP_001253591.1 CDS CBO1060 NC_009495.1 1168663 1169247 D hypothetical protein 1168663..1169247 Clostridium botulinum A str. ATCC 3502 5185315 YP_001253592.1 CDS CBO1061 NC_009495.1 1169560 1170261 R CAAX amino terminal protease complement(1169560..1170261) Clostridium botulinum A str. ATCC 3502 5185316 YP_001253593.1 CDS CBO1062 NC_009495.1 1170377 1171183 R metallo-beta-lactamase complement(1170377..1171183) Clostridium botulinum A str. ATCC 3502 5185317 YP_001253594.1 CDS CBO1063 NC_009495.1 1171567 1173486 R ABC transporter ATP-binding protein complement(1171567..1173486) Clostridium botulinum A str. ATCC 3502 5185318 YP_001253595.1 CDS CBO1064 NC_009495.1 1174124 1175338 D hypothetical protein 1174124..1175338 Clostridium botulinum A str. ATCC 3502 5185319 YP_001253596.1 CDS CBO1065 NC_009495.1 1175713 1176063 D ArsC family protein 1175713..1176063 Clostridium botulinum A str. ATCC 3502 5185320 YP_001253597.1 CDS CBO1066 NC_009495.1 1176086 1176205 D hypothetical protein 1176086..1176205 Clostridium botulinum A str. ATCC 3502 5185321 YP_001253598.1 CDS CBO1067 NC_009495.1 1176296 1177174 D radical SAM domain protein 1176296..1177174 Clostridium botulinum A str. ATCC 3502 5185322 YP_001253599.1 CDS glpA NC_009495.1 1177382 1178800 D FAD-dependent oxidoreductase 1177382..1178800 Clostridium botulinum A str. ATCC 3502 5185323 YP_001253600.1 CDS CBO1069 NC_009495.1 1178857 1180113 D pyridine nucleotide-disulfide oxidoreductase 1178857..1180113 Clostridium botulinum A str. ATCC 3502 5185324 YP_001253601.1 CDS CBO1070 NC_009495.1 1180116 1180484 D hypothetical protein 1180116..1180484 Clostridium botulinum A str. ATCC 3502 5185325 YP_001253602.1 CDS glpT NC_009495.1 1180573 1181910 D glycerol-3-phosphate transporter 1180573..1181910 Clostridium botulinum A str. ATCC 3502 5185326 YP_001253603.1 CDS argS NC_009495.1 1182492 1184183 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1182492..1184183 Clostridium botulinum A str. ATCC 3502 5185327 YP_001253604.1 CDS arcT NC_009495.1 1184628 1185758 D associated with arginine deiminase pathway genes; probably functions in arginine catabolism; transaminase 1184628..1185758 Clostridium botulinum A str. ATCC 3502 5185328 YP_001253605.1 CDS CBO1074 NC_009495.1 1185897 1186277 D hypothetical protein 1185897..1186277 Clostridium botulinum A str. ATCC 3502 5187169 YP_001253606.1 CDS CBO1075 NC_009495.1 1186334 1186558 R hypothetical protein complement(1186334..1186558) Clostridium botulinum A str. ATCC 3502 5185330 YP_001253607.1 CDS feoB NC_009495.1 1186669 1188432 R ferrous iron transport protein B complement(1186669..1188432) Clostridium botulinum A str. ATCC 3502 5185331 YP_001253608.1 CDS feoA NC_009495.1 1188447 1188668 R ferrous ion transport protein A complement(1188447..1188668) Clostridium botulinum A str. ATCC 3502 5185332 YP_001253609.1 CDS CBO1078 NC_009495.1 1188994 1189389 D hypothetical protein 1188994..1189389 Clostridium botulinum A str. ATCC 3502 5185333 YP_001253610.1 CDS CBO1079 NC_009495.1 1189602 1190327 D haloacid dehalogenase 1189602..1190327 Clostridium botulinum A str. ATCC 3502 5185334 YP_001253611.1 CDS CBO1080 NC_009495.1 1190575 1190709 D hypothetical protein 1190575..1190709 Clostridium botulinum A str. ATCC 3502 5185335 YP_001253612.1 CDS CBO1081 NC_009495.1 1190771 1192363 D glycosyl hydrolase 1190771..1192363 Clostridium botulinum A str. ATCC 3502 5185336 YP_001253613.1 CDS metN1 NC_009495.1 1193520 1194476 D D-methionine ABC transporterATP-binding protein 1193520..1194476 Clostridium botulinum A str. ATCC 3502 5185339 YP_001253614.1 CDS metI1 NC_009495.1 1194478 1195119 D methionine ABC transporter permease 1194478..1195119 Clostridium botulinum A str. ATCC 3502 5185340 YP_001253615.1 CDS metQ1 NC_009495.1 1195174 1195986 D lipoprotein, NLPA family 1195174..1195986 Clostridium botulinum A str. ATCC 3502 5185341 YP_001253616.1 CDS metQ2 NC_009495.1 1196175 1196987 D lipoprotein, NLPA family 1196175..1196987 Clostridium botulinum A str. ATCC 3502 5185342 YP_001253617.1 CDS CBO1088 NC_009495.1 1197215 1198381 D amidohydrolase 1197215..1198381 Clostridium botulinum A str. ATCC 3502 5185343 YP_001253618.1 CDS CBO1089 NC_009495.1 1198646 1198762 D Similar to N-terminal region of Pediococcus pentosaceus OrfQ and to the C-terminal region of Pseudomonas phage phiKZ; hypothetical protein 1198646..1198762 Clostridium botulinum A str. ATCC 3502 5185344 YP_001253619.1 CDS CBO1090 NC_009495.1 1198932 1199582 D hypothetical protein 1198932..1199582 Clostridium botulinum A str. ATCC 3502 5185345 YP_001253620.1 CDS CBO1091 NC_009495.1 1200088 1200780 D GntR family transcriptional regulator 1200088..1200780 Clostridium botulinum A str. ATCC 3502 5185346 YP_001253621.1 CDS CBO1092 NC_009495.1 1201025 1201888 D hypothetical protein 1201025..1201888 Clostridium botulinum A str. ATCC 3502 5185347 YP_001253622.1 CDS CBO1093 NC_009495.1 1202097 1202309 D hypothetical protein 1202097..1202309 Clostridium botulinum A str. ATCC 3502 5185348 YP_001253623.1 CDS gltX NC_009495.1 1202550 1204007 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(1202550..1204007) Clostridium botulinum A str. ATCC 3502 5187077 YP_001253624.1 CDS gap2 NC_009495.1 1204432 1205448 D Also similar to CBO0226 (66.26 38d); glyceraldehyde-3-phosphate dehydrogenase, type I 1204432..1205448 Clostridium botulinum A str. ATCC 3502 5185350 YP_001253625.1 CDS CBO1096 NC_009495.1 1205693 1207201 R metallo-beta-lactamase complement(1205693..1207201) Clostridium botulinum A str. ATCC 3502 5185351 YP_001253626.1 CDS CBO1097 NC_009495.1 1207519 1207716 D hypothetical protein 1207519..1207716 Clostridium botulinum A str. ATCC 3502 5185352 YP_001253627.1 CDS CBO1098 NC_009495.1 1207859 1208503 D HD domain-containing protein 1207859..1208503 Clostridium botulinum A str. ATCC 3502 5185353 YP_001253628.1 CDS aldH NC_009495.1 1208559 1209929 D aldehyde dehydrogenase 1208559..1209929 Clostridium botulinum A str. ATCC 3502 5185354 YP_001253629.1 CDS CBO1100 NC_009495.1 1210012 1211409 R This CDS is also similar to CBO1101 (77.042 identity in 453 aa overlap).; sodium:alanine symporter complement(1210012..1211409) Clostridium botulinum A str. ATCC 3502 5185355 YP_001253630.1 CDS CBO1101 NC_009495.1 1212006 1213382 R This CDS is also similar to CBO1100 (77.042 identity in 453 aa overlap).; sodium:alanine symporter complement(1212006..1213382) Clostridium botulinum A str. ATCC 3502 5185356 YP_001253631.1 CDS CBO1102 NC_009495.1 1213820 1214257 D MarR family transcriptional regulator 1213820..1214257 Clostridium botulinum A str. ATCC 3502 5185357 YP_001253632.1 CDS CBO1103 NC_009495.1 1214275 1215642 D MATE efflux family protein 1214275..1215642 Clostridium botulinum A str. ATCC 3502 5185358 YP_001253633.1 CDS CBO1104 NC_009495.1 1216061 1216606 D TPR domain protein 1216061..1216606 Clostridium botulinum A str. ATCC 3502 5185359 YP_001253634.1 CDS CBO1105 NC_009495.1 1216705 1217682 D hypothetical protein 1216705..1217682 Clostridium botulinum A str. ATCC 3502 5185360 YP_001253635.1 CDS CBO1106 NC_009495.1 1217984 1218091 R hypothetical protein complement(1217984..1218091) Clostridium botulinum A str. ATCC 3502 5185361 YP_001253636.1 CDS CBO1107 NC_009495.1 1218489 1219727 D ABC transporter solute-binding protein 1218489..1219727 Clostridium botulinum A str. ATCC 3502 5185362 YP_001253637.1 CDS potB NC_009495.1 1219729 1220595 D ABC transporter permease 1219729..1220595 Clostridium botulinum A str. ATCC 3502 5187992 YP_001253638.1 CDS CBO1109 NC_009495.1 1220618 1221424 D ABC transporter permease 1220618..1221424 Clostridium botulinum A str. ATCC 3502 5185364 YP_001253639.1 CDS potA NC_009495.1 1221436 1222455 D ABC transporter ATP-binding protein 1221436..1222455 Clostridium botulinum A str. ATCC 3502 5185365 YP_001253640.1 CDS CBO1111 NC_009495.1 1222758 1223717 D hypothetical protein 1222758..1223717 Clostridium botulinum A str. ATCC 3502 5185366 YP_001253641.1 CDS CBO1112 NC_009495.1 1223821 1224372 D GNAT family acetyltransferase 1223821..1224372 Clostridium botulinum A str. ATCC 3502 5185367 YP_001253642.1 CDS CBO1113 NC_009495.1 1224382 1224717 D hypothetical protein 1224382..1224717 Clostridium botulinum A str. ATCC 3502 5185368 YP_001253643.1 CDS CBO1114 NC_009495.1 1224793 1225071 D hypothetical protein 1224793..1225071 Clostridium botulinum A str. ATCC 3502 5185369 YP_001253644.1 CDS CBO1115 NC_009495.1 1225072 1225668 D hypothetical protein 1225072..1225668 Clostridium botulinum A str. ATCC 3502 5185370 YP_001253645.1 CDS maa NC_009495.1 1225956 1226510 D maltose transacetylase 1225956..1226510 Clostridium botulinum A str. ATCC 3502 5185371 YP_001253646.1 CDS birA NC_009495.1 1227570 1228553 R bifunctional biotin operon repressor/biotin--[acetyl-CoA-carboxylase] synthetase complement(1227570..1228553) Clostridium botulinum A str. ATCC 3502 5185372 YP_001253647.1 CDS CBO1118 NC_009495.1 1228717 1228920 D heavy metal-binding protein 1228717..1228920 Clostridium botulinum A str. ATCC 3502 5187717 YP_001253648.1 CDS CBO1119 NC_009495.1 1229196 1229633 D hypothetical protein 1229196..1229633 Clostridium botulinum A str. ATCC 3502 5185374 YP_001253649.1 CDS CBO1120 NC_009495.1 1229793 1231226 D sensor histidine kinase 1229793..1231226 Clostridium botulinum A str. ATCC 3502 5185375 YP_001253650.1 CDS CBO1121 NC_009495.1 1231338 1231463 R hypothetical protein complement(1231338..1231463) Clostridium botulinum A str. ATCC 3502 5185376 YP_001253651.1 CDS CBO1122 NC_009495.1 1232092 1232871 D hypothetical protein 1232092..1232871 Clostridium botulinum A str. ATCC 3502 5185377 YP_001253652.1 CDS CBO1123 NC_009495.1 1233109 1233234 D hypothetical protein 1233109..1233234 Clostridium botulinum A str. ATCC 3502 5185378 YP_001253653.1 CDS CBO1124 NC_009495.1 1233348 1234706 D magnesium transporter 1233348..1234706 Clostridium botulinum A str. ATCC 3502 5185379 YP_001253654.1 CDS CBO1126 NC_009495.1 1235709 1236782 D class V aminotransferase 1235709..1236782 Clostridium botulinum A str. ATCC 3502 5185381 YP_001253655.1 CDS serA NC_009495.1 1237010 1237954 D D-3-phosphoglycerate dehydrogenase 1237010..1237954 Clostridium botulinum A str. ATCC 3502 5185382 YP_001253656.1 CDS CBO1128 NC_009495.1 1237932 1239254 D hypothetical protein 1237932..1239254 Clostridium botulinum A str. ATCC 3502 5185383 YP_001253657.1 CDS flrD NC_009495.1 1239855 1241045 D metallo-beta-lactamase/flavodoxin domain-containing protein 1239855..1241045 Clostridium botulinum A str. ATCC 3502 5185384 YP_001253658.1 CDS CBO1130 NC_009495.1 1241204 1245493 D similarity to activators of 2-hydroxyacyl-CoA dehydratases is confined to the N-terminal region; Also similar to CBO3170 (62.2 38d).; CoA-substrate-specific enzyme activase 1241204..1245493 Clostridium botulinum A str. ATCC 3502 5187555 YP_001253659.1 CDS opuD NC_009495.1 1245567 1247081 R choline/carnitine/betaine transporter complement(1245567..1247081) Clostridium botulinum A str. ATCC 3502 5185386 YP_001253660.1 CDS busR NC_009495.1 1247440 1248066 D glycine betaine uptake system transcriptional repressor 1247440..1248066 Clostridium botulinum A str. ATCC 3502 5185387 YP_001253661.1 CDS CBO1133 NC_009495.1 1248177 1248677 D hypothetical protein 1248177..1248677 Clostridium botulinum A str. ATCC 3502 5187527 YP_001253662.1 CDS nam NC_009495.1 1248976 1249536 D pyrazinamidase/nicotinamidase 1248976..1249536 Clostridium botulinum A str. ATCC 3502 5187209 YP_001253663.1 CDS pspE NC_009495.1 1249694 1250005 D phage shock protein 1249694..1250005 Clostridium botulinum A str. ATCC 3502 5187800 YP_001253664.1 CDS CBO1136 NC_009495.1 1250081 1250545 D hypothetical protein 1250081..1250545 Clostridium botulinum A str. ATCC 3502 5185391 YP_001253665.1 CDS CBO1137 NC_009495.1 1250822 1251022 D hypothetical protein 1250822..1251022 Clostridium botulinum A str. ATCC 3502 5185392 YP_001253666.1 CDS CBO1138 NC_009495.1 1251199 1252110 D hypothetical protein 1251199..1252110 Clostridium botulinum A str. ATCC 3502 5185393 YP_001253667.1 CDS xpt NC_009495.1 1252271 1252843 D Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase 1252271..1252843 Clostridium botulinum A str. ATCC 3502 5185394 YP_001253668.1 CDS CBO1140 NC_009495.1 1253141 1253722 D hypothetical protein 1253141..1253722 Clostridium botulinum A str. ATCC 3502 5187540 YP_001253669.1 CDS CBO1141 NC_009495.1 1254029 1255411 D thiosulfate sulfurtransferase 1254029..1255411 Clostridium botulinum A str. ATCC 3502 5187040 YP_001253670.1 CDS CBO1142 NC_009495.1 1255607 1256029 D hypothetical protein 1255607..1256029 Clostridium botulinum A str. ATCC 3502 5187248 YP_001253671.1 CDS CBO1143 NC_009495.1 1256373 1257476 D transporter 1256373..1257476 Clostridium botulinum A str. ATCC 3502 5185398 YP_001253672.1 CDS CBO1144 NC_009495.1 1257656 1257985 D MazG family protein 1257656..1257985 Clostridium botulinum A str. ATCC 3502 5187523 YP_001253673.1 CDS CBO1145 NC_009495.1 1258122 1259861 D hypothetical protein 1258122..1259861 Clostridium botulinum A str. ATCC 3502 5185400 YP_001253674.1 CDS CBO1146 NC_009495.1 1260632 1260772 D hypothetical protein 1260632..1260772 Clostridium botulinum A str. ATCC 3502 5185401 YP_001253675.1 CDS CBO1147 NC_009495.1 1260954 1262153 D hypothetical protein 1260954..1262153 Clostridium botulinum A str. ATCC 3502 5185402 YP_001253676.1 CDS CBO1148 NC_009495.1 1262146 1262265 D hypothetical protein 1262146..1262265 Clostridium botulinum A str. ATCC 3502 5185403 YP_001253677.1 CDS CBO1149 NC_009495.1 1262612 1263367 D ABC transporter ATP-binding protein 1262612..1263367 Clostridium botulinum A str. ATCC 3502 5185404 YP_001253678.1 CDS CBO1150 NC_009495.1 1263368 1264033 D ABC transporter permease 1263368..1264033 Clostridium botulinum A str. ATCC 3502 5187148 YP_001253679.1 CDS CBO1151 NC_009495.1 1264087 1264926 D ABC transporter substrate-binding lipoprotein 1264087..1264926 Clostridium botulinum A str. ATCC 3502 5187538 YP_001253680.1 CDS CBO1152 NC_009495.1 1265001 1266209 D peptidase 1265001..1266209 Clostridium botulinum A str. ATCC 3502 5185407 YP_001253681.1 CDS CBO1153 NC_009495.1 1266284 1267330 D ABC transporter substrate-binding protein 1266284..1267330 Clostridium botulinum A str. ATCC 3502 5185408 YP_001253682.1 CDS CBO1154 NC_009495.1 1267332 1269020 D ABC transporter permease 1267332..1269020 Clostridium botulinum A str. ATCC 3502 5187507 YP_001253683.1 CDS CBO1155 NC_009495.1 1268983 1269918 D ABC transporter ATP-binding protein 1268983..1269918 Clostridium botulinum A str. ATCC 3502 5185410 YP_001253684.1 CDS CBO1156 NC_009495.1 1269983 1270777 R hypothetical protein complement(1269983..1270777) Clostridium botulinum A str. ATCC 3502 5187054 YP_001253685.1 CDS CBO1157 NC_009495.1 1271081 1272247 D hypothetical protein 1271081..1272247 Clostridium botulinum A str. ATCC 3502 5185412 YP_001253686.1 CDS rpsA NC_009495.1 1272664 1273809 D in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1272664..1273809 Clostridium botulinum A str. ATCC 3502 5185414 YP_001253687.1 CDS CBO1160 NC_009495.1 1273992 1274411 D thioesterase 1273992..1274411 Clostridium botulinum A str. ATCC 3502 5185415 YP_001253688.1 CDS CBO1161 NC_009495.1 1274583 1274999 D hypothetical protein 1274583..1274999 Clostridium botulinum A str. ATCC 3502 5185416 YP_001253689.1 CDS CBO1162 NC_009495.1 1275868 1276875 D ABC transporter substrate-binding protein 1275868..1276875 Clostridium botulinum A str. ATCC 3502 5185417 YP_001253690.1 CDS CBO1163 NC_009495.1 1276875 1277780 D ABC transporter permease 1276875..1277780 Clostridium botulinum A str. ATCC 3502 5185418 YP_001253691.1 CDS CBO1164 NC_009495.1 1277743 1278537 D ABC transporter ATP-binding protein 1277743..1278537 Clostridium botulinum A str. ATCC 3502 5185419 YP_001253692.1 CDS CBO1165 NC_009495.1 1278867 1279169 D hypothetical protein 1278867..1279169 Clostridium botulinum A str. ATCC 3502 5185420 YP_001253693.1 CDS asdA NC_009495.1 1279602 1281245 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1279602..1281245 Clostridium botulinum A str. ATCC 3502 5185421 YP_001253694.1 CDS CBO1167 NC_009495.1 1281371 1282252 R hypothetical protein complement(1281371..1282252) Clostridium botulinum A str. ATCC 3502 5185422 YP_001253695.1 CDS CBO1168 NC_009495.1 1282835 1283932 D kinase, PfkB family 1282835..1283932 Clostridium botulinum A str. ATCC 3502 5185423 YP_001253696.1 CDS CBO1169 NC_009495.1 1283926 1284849 D indigoidine synthase A family protein 1283926..1284849 Clostridium botulinum A str. ATCC 3502 5187469 YP_001253697.1 CDS panE NC_009495.1 1285341 1286252 D 2-dehydropantoate 2-reductase 1285341..1286252 Clostridium botulinum A str. ATCC 3502 5185425 YP_001253698.1 CDS fchA NC_009495.1 1286555 1287187 D methenyltetrahydrofolate cyclohydrolase 1286555..1287187 Clostridium botulinum A str. ATCC 3502 5185426 YP_001253699.1 CDS CBO1172 NC_009495.1 1287187 1288035 D methylenetetrahydrofolate dehydrogenase 1287187..1288035 Clostridium botulinum A str. ATCC 3502 5185427 YP_001253700.1 CDS CBO1173 NC_009495.1 1288355 1289149 D HAD hydrolase 1288355..1289149 Clostridium botulinum A str. ATCC 3502 5185428 YP_001253701.1 CDS CBO1174 NC_009495.1 1289376 1289882 R diamine N-acetyltransferase complement(1289376..1289882) Clostridium botulinum A str. ATCC 3502 5185429 YP_001253702.1 CDS CBO1176 NC_009495.1 1290315 1291055 D hypothetical protein 1290315..1291055 Clostridium botulinum A str. ATCC 3502 5185431 YP_001253703.1 CDS CBO1177 NC_009495.1 1291175 1291984 D zinc transporter 1291175..1291984 Clostridium botulinum A str. ATCC 3502 5185432 YP_001253704.1 CDS CBO1178 NC_009495.1 1292656 1293093 D rrf2 family protein 1292656..1293093 Clostridium botulinum A str. ATCC 3502 5185433 YP_001253705.1 CDS cysK2 NC_009495.1 1293422 1294351 D Also similar to CBO0205 (53.5 38d).; cysteine synthase A 1293422..1294351 Clostridium botulinum A str. ATCC 3502 5185434 YP_001253706.1 CDS CBO1180 NC_009495.1 1294396 1295064 D amino acid ABC transporter permease 1294396..1295064 Clostridium botulinum A str. ATCC 3502 5185435 YP_001253707.1 CDS CBO1181 NC_009495.1 1295099 1295923 D polar amino acid ABC transporter amino acid-binding protein 1295099..1295923 Clostridium botulinum A str. ATCC 3502 5187587 YP_001253708.1 CDS iscS NC_009495.1 1296024 1297154 D cysteine desulfhydrase 1296024..1297154 Clostridium botulinum A str. ATCC 3502 5185437 YP_001253709.1 CDS CBO1183 NC_009495.1 1297226 1298026 D hypothetical protein 1297226..1298026 Clostridium botulinum A str. ATCC 3502 5185438 YP_001253710.1 CDS mnmA NC_009495.1 1298425 1299495 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 1298425..1299495 Clostridium botulinum A str. ATCC 3502 5185440 YP_001253711.1 CDS CBO1186 NC_009495.1 1299835 1300554 D DNA-binding response regulator, LytTr family 1299835..1300554 Clostridium botulinum A str. ATCC 3502 5185441 YP_001253712.1 CDS CBO1187 NC_009495.1 1300575 1301894 D sensor histidine kinase 1300575..1301894 Clostridium botulinum A str. ATCC 3502 5185442 YP_001253713.1 CDS CBO1188 NC_009495.1 1302267 1303190 D bacitracin ABC transporter ATP-binding protein BcrA 1302267..1303190 Clostridium botulinum A str. ATCC 3502 5185443 YP_001253714.1 CDS CBO1189 NC_009495.1 1303183 1303923 D hypothetical protein 1303183..1303923 Clostridium botulinum A str. ATCC 3502 5185444 YP_001253715.1 CDS CBO1190 NC_009495.1 1304526 1306412 D glycerophosphoryl diester phosphodiesterase 1304526..1306412 Clostridium botulinum A str. ATCC 3502 5185445 YP_001253716.1 CDS CBO1191 NC_009495.1 1306741 1306926 D hypothetical protein 1306741..1306926 Clostridium botulinum A str. ATCC 3502 5185446 YP_001253717.1 CDS nifJ1 NC_009495.1 1306966 1310484 R Also similar to CBO2760 (65.74 38d); pyruvate-flavodoxin oxidoreductase complement(1306966..1310484) Clostridium botulinum A str. ATCC 3502 5185447 YP_001253718.1 CDS CBO1193 NC_009495.1 1310787 1311407 D TetR family transcriptional regulator 1310787..1311407 Clostridium botulinum A str. ATCC 3502 5185448 YP_001253719.1 CDS CBO1194 NC_009495.1 1311404 1312660 D transporter monovalent cation:proton antiporter-2 (CPA2) family 1311404..1312660 Clostridium botulinum A str. ATCC 3502 5185449 YP_001253720.1 CDS CBO1195 NC_009495.1 1312961 1314436 D hypothetical protein 1312961..1314436 Clostridium botulinum A str. ATCC 3502 5185450 YP_001253721.1 CDS CBO1197 NC_009495.1 1314947 1316680 D amine oxidase 1314947..1316680 Clostridium botulinum A str. ATCC 3502 5185452 YP_001253722.1 CDS CBO1198 NC_009495.1 1316725 1317615 R AraC family transcriptional regulator complement(1316725..1317615) Clostridium botulinum A str. ATCC 3502 5185453 YP_001253723.1 CDS CBO1199 NC_009495.1 1317815 1318540 D Similar to the C-terminal region of several transporters.; hypothetical protein 1317815..1318540 Clostridium botulinum A str. ATCC 3502 5185454 YP_001253724.1 CDS CBO1200 NC_009495.1 1318554 1319882 D O-glycosyl hydrolase, family 30 1318554..1319882 Clostridium botulinum A str. ATCC 3502 5185455 YP_001253725.1 CDS CBO1201 NC_009495.1 1319946 1320887 D ROK family protein 1319946..1320887 Clostridium botulinum A str. ATCC 3502 5185456 YP_001253726.1 CDS CBO1202 NC_009495.1 1320890 1322335 D glycosyl hydrolase family protein 1320890..1322335 Clostridium botulinum A str. ATCC 3502 5185457 YP_001253727.1 CDS CBO1203 NC_009495.1 1323006 1324634 D beta-amylase 1323006..1324634 Clostridium botulinum A str. ATCC 3502 5187307 YP_001253728.1 CDS tyrR NC_009495.1 1325403 1326605 D catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 1325403..1326605 Clostridium botulinum A str. ATCC 3502 5185459 YP_001253729.1 CDS CBO1205 NC_009495.1 1326892 1327263 D GntR family transcriptional regulator 1326892..1327263 Clostridium botulinum A str. ATCC 3502 5185460 YP_001253730.1 CDS CBO1206 NC_009495.1 1327256 1328128 D ABC transporter ATP-binding protein 1327256..1328128 Clostridium botulinum A str. ATCC 3502 5185461 YP_001253731.1 CDS CBO1207 NC_009495.1 1328129 1328875 D hypothetical protein 1328129..1328875 Clostridium botulinum A str. ATCC 3502 5187421 YP_001253732.1 CDS CBO1208 NC_009495.1 1329009 1329377 R hypothetical protein complement(1329009..1329377) Clostridium botulinum A str. ATCC 3502 5185463 YP_001253733.1 CDS CBO1210 NC_009495.1 1329727 1330641 D hypothetical protein 1329727..1330641 Clostridium botulinum A str. ATCC 3502 5185465 YP_001253734.1 CDS CBO1211 NC_009495.1 1330830 1333541 D . CDS contains imperfect repeat regions rich in lysine, glutamic acid and asparagine.; hypothetical protein 1330830..1333541 Clostridium botulinum A str. ATCC 3502 5185466 YP_001253735.1 CDS CBO1212 NC_009495.1 1333619 1335133 D glycosyl hydrolase family protein 1333619..1335133 Clostridium botulinum A str. ATCC 3502 5185467 YP_001253736.1 CDS CBO1213 NC_009495.1 1335307 1336566 D sensory box-containing diguanylate cyclase 1335307..1336566 Clostridium botulinum A str. ATCC 3502 5185468 YP_001253737.1 CDS sdhB NC_009495.1 1336966 1337640 D L-serine dehydratase, iron-sulfur-dependent subunit beta 1336966..1337640 Clostridium botulinum A str. ATCC 3502 5185469 YP_001253738.1 CDS sdhA NC_009495.1 1337653 1338543 D L-serine dehydratase, iron-sulfur-dependent subunit alpha 1337653..1338543 Clostridium botulinum A str. ATCC 3502 5185470 YP_001253739.1 CDS CBO1216 NC_009495.1 1338967 1339176 D hypothetical protein 1338967..1339176 Clostridium botulinum A str. ATCC 3502 5185471 YP_001253740.1 CDS CBO1217 NC_009495.1 1339335 1339478 R hypothetical protein complement(1339335..1339478) Clostridium botulinum A str. ATCC 3502 5185472 YP_001253741.1 CDS CBO1218 NC_009495.1 1339562 1339681 D hypothetical protein 1339562..1339681 Clostridium botulinum A str. ATCC 3502 5185473 YP_001253742.1 CDS CBO1219 NC_009495.1 1339750 1340334 D hypothetical protein 1339750..1340334 Clostridium botulinum A str. ATCC 3502 5187035 YP_001253743.1 CDS CBO1220 NC_009495.1 1340356 1341324 R dipeptidase complement(1340356..1341324) Clostridium botulinum A str. ATCC 3502 5185475 YP_001253744.1 CDS CBO1221 NC_009495.1 1341704 1342126 R hypothetical protein complement(1341704..1342126) Clostridium botulinum A str. ATCC 3502 5185476 YP_001253745.1 CDS CBO1221A NC_009495.1 1342119 1342397 R hypothetical protein complement(1342119..1342397) Clostridium botulinum A str. ATCC 3502 5204265 YP_001253746.1 CDS CBO1222 NC_009495.1 1342504 1343715 R ABC transporter permease complement(1342504..1343715) Clostridium botulinum A str. ATCC 3502 5185477 YP_001253747.1 CDS CBO1223 NC_009495.1 1343789 1344604 R hypothetical protein complement(1343789..1344604) Clostridium botulinum A str. ATCC 3502 5185478 YP_001253748.1 CDS CBO1224 NC_009495.1 1344641 1345315 R oligopeptide ABC transporter ATP-binding protein complement(1344641..1345315) Clostridium botulinum A str. ATCC 3502 5185479 YP_001253749.1 CDS appC NC_009495.1 1345488 1346345 R oligopeptide ABC transporter permease complement(1345488..1346345) Clostridium botulinum A str. ATCC 3502 5185480 YP_001253750.1 CDS appB NC_009495.1 1346342 1347295 R oligopeptide ABC transporter permease complement(1346342..1347295) Clostridium botulinum A str. ATCC 3502 5185481 YP_001253751.1 CDS appA NC_009495.1 1347494 1349092 R oligopeptide ABC transporter oligopeptide-binding protein complement(1347494..1349092) Clostridium botulinum A str. ATCC 3502 5185482 YP_001253752.1 CDS CBO1228 NC_009495.1 1349384 1349545 D hypothetical protein 1349384..1349545 Clostridium botulinum A str. ATCC 3502 5185483 YP_001253753.1 CDS cotJB NC_009495.1 1349579 1349851 D spore coat peptide assembly protein CotJB 1349579..1349851 Clostridium botulinum A str. ATCC 3502 5185484 YP_001253754.1 CDS cotJC NC_009495.1 1349882 1350454 D spore coat peptide assembly protein CotJC 1349882..1350454 Clostridium botulinum A str. ATCC 3502 5185485 YP_001253755.1 CDS CBO1231 NC_009495.1 1350684 1351703 D hypothetical protein 1350684..1351703 Clostridium botulinum A str. ATCC 3502 5187490 YP_001253756.1 CDS CBO1232 NC_009495.1 1351720 1352784 D exported protein 1351720..1352784 Clostridium botulinum A str. ATCC 3502 5185487 YP_001253757.1 CDS CBO1233 NC_009495.1 1353431 1353922 D hypothetical protein 1353431..1353922 Clostridium botulinum A str. ATCC 3502 5185488 YP_001253758.1 CDS CBO1234 NC_009495.1 1354160 1354564 R hypothetical protein complement(1354160..1354564) Clostridium botulinum A str. ATCC 3502 5185489 YP_001253759.1 CDS CBO1235 NC_009495.1 1354911 1355537 D deoxyuridine 5'-triphosphate nucleotidohydrolase 1354911..1355537 Clostridium botulinum A str. ATCC 3502 5185490 YP_001253760.1 CDS CBO1236 NC_009495.1 1355591 1355782 R Also similar to CBO0789 (31.7 38d.).; small acid-soluble spore protein, H-type complement(1355591..1355782) Clostridium botulinum A str. ATCC 3502 5185491 YP_001253761.1 CDS CBO1237 NC_009495.1 1355980 1356087 D hypothetical protein 1355980..1356087 Clostridium botulinum A str. ATCC 3502 5185492 YP_001253762.1 CDS CBO1238 NC_009495.1 1356296 1357051 R hypothetical protein complement(1356296..1357051) Clostridium botulinum A str. ATCC 3502 5185493 YP_001253763.1 CDS CBO1239 NC_009495.1 1357433 1357591 D hypothetical protein 1357433..1357591 Clostridium botulinum A str. ATCC 3502 5185494 YP_001253764.1 CDS CBO1240 NC_009495.1 1357709 1358242 R DNA-binding protein complement(1357709..1358242) Clostridium botulinum A str. ATCC 3502 5185495 YP_001253765.1 CDS CBO1241 NC_009495.1 1358666 1359715 D hypothetical protein 1358666..1359715 Clostridium botulinum A str. ATCC 3502 5185496 YP_001253766.1 CDS CBO1242 NC_009495.1 1360149 1360736 D TetR family transcriptional regulator 1360149..1360736 Clostridium botulinum A str. ATCC 3502 5185497 YP_001253767.1 CDS CBO1243A NC_009495.1 1361032 1361253 D Similar over the entire length of Clostridium perfringens stage III sporulation protein AC, spoIIIAC,and Staphylococcus epidermidis hypothetical protein SE2234. It is also similar to the N-terminus of Streptococcus thermophilus bacteriophage Sfi21 Orf203 protein.; hypothetical protein 1361032..1361253 Clostridium botulinum A str. ATCC 3502 5204266 YP_001253768.1 CDS CBO1244 NC_009495.1 1361265 1361498 D hypothetical protein 1361265..1361498 Clostridium botulinum A str. ATCC 3502 5187498 YP_001253769.1 CDS CBO1245 NC_009495.1 1362004 1363440 R sodium:alanine symporter family protein complement(1362004..1363440) Clostridium botulinum A str. ATCC 3502 5187500 YP_001253770.1 CDS CBO1246 NC_009495.1 1363470 1363613 D hypothetical protein 1363470..1363613 Clostridium botulinum A str. ATCC 3502 5185501 YP_001253771.1 CDS CBO1247 NC_009495.1 1364610 1364918 D hypothetical protein 1364610..1364918 Clostridium botulinum A str. ATCC 3502 5185502 YP_001253772.1 CDS CBO1248 NC_009495.1 1365562 1365783 D DNA-binding protein 1365562..1365783 Clostridium botulinum A str. ATCC 3502 5185503 YP_001253773.1 CDS CBO1248A NC_009495.1 1365944 1366048 D hypothetical protein 1365944..1366048 Clostridium botulinum A str. ATCC 3502 5204267 YP_001253774.1 CDS CBO1249 NC_009495.1 1366045 1366212 D hypothetical protein 1366045..1366212 Clostridium botulinum A str. ATCC 3502 5187005 YP_001253775.1 CDS CBO1249A NC_009495.1 1366222 1366314 D hypothetical protein 1366222..1366314 Clostridium botulinum A str. ATCC 3502 5204268 YP_001253776.1 CDS CBO1250 NC_009495.1 1366654 1366920 D hypothetical protein 1366654..1366920 Clostridium botulinum A str. ATCC 3502 5187429 YP_001253777.1 CDS CBO1251 NC_009495.1 1367204 1367950 D lipoprotein 1367204..1367950 Clostridium botulinum A str. ATCC 3502 5185506 YP_001253778.1 CDS grxC NC_009495.1 1368269 1368496 D rubredoxin 1368269..1368496 Clostridium botulinum A str. ATCC 3502 5187056 YP_001253779.1 CDS gapN NC_009495.1 1368528 1369988 R NADP-dependent glyceraldehyde-3-phosphate dehydrogenase complement(1368528..1369988) Clostridium botulinum A str. ATCC 3502 5185508 YP_001253780.1 CDS trxB1 NC_009495.1 1370028 1370969 R thioredoxin reductase complement(1370028..1370969) Clostridium botulinum A str. ATCC 3502 5185509 YP_001253781.1 CDS grdX NC_009495.1 1371766 1372143 D GrdX protein 1371766..1372143 Clostridium botulinum A str. ATCC 3502 5185510 YP_001253782.1 CDS grdE NC_009495.1 1372234 1373520 D glycine reductase complex component B, alpha and beta subunits 1372234..1373520 Clostridium botulinum A str. ATCC 3502 5185511 YP_001253783.1 CDS grdB NC_009495.1 1373553 1374854 D Selenoprotein. This CDS contains an opal stop codon that is read-through as selenocysteine.; glycine reductase complex component b gamma subunit join(1373553..1374593,1374597..1374854) Clostridium botulinum A str. ATCC 3502 5185512 YP_001253784.1 CDS trxB2 NC_009495.1 1375005 1375946 D thioredoxin-disulfide reductase 1375005..1375946 Clostridium botulinum A str. ATCC 3502 5185514 YP_001253785.1 CDS trxA NC_009495.1 1375980 1376300 D thioredoxin family protein 1375980..1376300 Clostridium botulinum A str. ATCC 3502 5185515 YP_001253786.1 CDS grdA NC_009495.1 1376386 1376862 D GrdA accepts a carboxymethylselenoether from protein B and transfers it to protein C forming a protein C-bound acetyl-thioester; oxidized GrdA is then reduced by thioredoxin; glycine/sarcosine/betaine reductase complex protein A join(1376386..1376514,1376518..1376862) Clostridium botulinum A str. ATCC 3502 5185516 YP_001253787.1 CDS grdC NC_009495.1 1376957 1378495 D glycine reductase complex component C subunit beta 1376957..1378495 Clostridium botulinum A str. ATCC 3502 5185518 YP_001253788.1 CDS grdD NC_009495.1 1378511 1379677 D glycine reductase complex component C subunit alpha 1378511..1379677 Clostridium botulinum A str. ATCC 3502 5185519 YP_001253789.1 CDS CBO1265 NC_009495.1 1380104 1380715 D responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 1380104..1380715 Clostridium botulinum A str. ATCC 3502 5185520 YP_001253790.1 CDS CBO1266 NC_009495.1 1380781 1383006 D restriction endonuclease 1380781..1383006 Clostridium botulinum A str. ATCC 3502 5187022 YP_001253791.1 CDS mtnK NC_009495.1 1383442 1384653 D phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway; methylthioribose kinase 1383442..1384653 Clostridium botulinum A str. ATCC 3502 5185522 YP_001253792.1 CDS mtnA NC_009495.1 1384793 1385842 D isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway; methylthioribose-1-phosphate isomerase 1384793..1385842 Clostridium botulinum A str. ATCC 3502 5185523 YP_001253793.1 CDS CBO1270 NC_009495.1 1385993 1386640 D AraD/FucA subfamily aldolase 1385993..1386640 Clostridium botulinum A str. ATCC 3502 5185525 YP_001253794.1 CDS CBO1271 NC_009495.1 1386814 1387608 D DeoR family transcriptional regulator 1386814..1387608 Clostridium botulinum A str. ATCC 3502 5185526 YP_001253795.1 CDS CBO1273 NC_009495.1 1387915 1388274 D hypothetical protein 1387915..1388274 Clostridium botulinum A str. ATCC 3502 5185528 YP_001253796.1 CDS CBO1274 NC_009495.1 1388628 1389503 R cation efflux family protein complement(1388628..1389503) Clostridium botulinum A str. ATCC 3502 5185529 YP_001253797.1 CDS CBO1275 NC_009495.1 1389751 1390479 D hypothetical protein 1389751..1390479 Clostridium botulinum A str. ATCC 3502 5185530 YP_001253798.1 CDS CBO1276 NC_009495.1 1390641 1391006 D hypothetical protein 1390641..1391006 Clostridium botulinum A str. ATCC 3502 5185531 YP_001253799.1 CDS CBO1277 NC_009495.1 1391148 1391486 D hypothetical protein 1391148..1391486 Clostridium botulinum A str. ATCC 3502 5185532 YP_001253800.1 CDS CBO1278 NC_009495.1 1391483 1391956 D hypothetical protein 1391483..1391956 Clostridium botulinum A str. ATCC 3502 5185533 YP_001253801.1 CDS CBO1279 NC_009495.1 1392339 1392704 D hypothetical protein 1392339..1392704 Clostridium botulinum A str. ATCC 3502 5185534 YP_001253802.1 CDS CBO1280 NC_009495.1 1392788 1393480 D hypothetical protein 1392788..1393480 Clostridium botulinum A str. ATCC 3502 5185535 YP_001253803.1 CDS CBO1281 NC_009495.1 1393551 1393721 R hypothetical protein complement(1393551..1393721) Clostridium botulinum A str. ATCC 3502 5185536 YP_001253804.1 CDS CBO1281A NC_009495.1 1394102 1394335 R hypothetical protein complement(1394102..1394335) Clostridium botulinum A str. ATCC 3502 5204269 YP_001253805.1 CDS CBO1283 NC_009495.1 1395523 1395819 D hypothetical protein 1395523..1395819 Clostridium botulinum A str. ATCC 3502 5185538 YP_001253806.1 CDS CBO1284 NC_009495.1 1395838 1396143 D hypothetical protein 1395838..1396143 Clostridium botulinum A str. ATCC 3502 5185539 YP_001253807.1 CDS xdhA2 NC_009495.1 1396200 1398497 D molybdenum cofactor-binding protein; participates in purine salvage; xanthine dehydrogenase subunit XdhA 1396200..1398497 Clostridium botulinum A str. ATCC 3502 5185540 YP_001253808.1 CDS xdhB2 NC_009495.1 1398511 1399395 D FAD-binding subunit; with XdhA and XdhC participates in purine salvage; xanthine dehydrogenase subunit XdhB 1398511..1399395 Clostridium botulinum A str. ATCC 3502 5185541 YP_001253809.1 CDS xdhC2 NC_009495.1 1399427 1399900 D xanthine dehydrogenase, iron-sulfur binding subunit 1399427..1399900 Clostridium botulinum A str. ATCC 3502 5185542 YP_001253810.1 CDS guaD NC_009495.1 1400016 1400489 D guanine deaminase 1400016..1400489 Clostridium botulinum A str. ATCC 3502 5185543 YP_001253811.1 CDS CBO1289 NC_009495.1 1400879 1403074 D decatenates replicating daughter chromosomes; DNA topoisomerase III 1400879..1403074 Clostridium botulinum A str. ATCC 3502 5185544 YP_001253812.1 CDS CBO1290 NC_009495.1 1403386 1403991 D hypothetical protein 1403386..1403991 Clostridium botulinum A str. ATCC 3502 5185545 YP_001253813.1 CDS CBO1291 NC_009495.1 1404057 1404293 D hypothetical protein 1404057..1404293 Clostridium botulinum A str. ATCC 3502 5185546 YP_001253814.1 CDS tal NC_009495.1 1405020 1405673 D similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase 1405020..1405673 Clostridium botulinum A str. ATCC 3502 5185547 YP_001253815.1 CDS CBO1293 NC_009495.1 1406072 1407736 D RNA-metabolising metallo-beta-lactamase 1406072..1407736 Clostridium botulinum A str. ATCC 3502 5185548 YP_001253816.1 CDS CBO1294 NC_009495.1 1408041 1409393 D sodium/alanine symporter 1408041..1409393 Clostridium botulinum A str. ATCC 3502 5185549 YP_001253817.1 CDS CBO1295 NC_009495.1 1409708 1410553 D diguanylate cyclase 1409708..1410553 Clostridium botulinum A str. ATCC 3502 5185550 YP_001253818.1 CDS CBO1296 NC_009495.1 1410546 1412198 D STE like transcription factor domain protein 1410546..1412198 Clostridium botulinum A str. ATCC 3502 5185551 YP_001253819.1 CDS CBO1297 NC_009495.1 1412204 1413466 D glycosyl transferase family protein 1412204..1413466 Clostridium botulinum A str. ATCC 3502 5187234 YP_001253820.1 CDS CBO1298 NC_009495.1 1413747 1415843 D cellulose synthase domain protein 1413747..1415843 Clostridium botulinum A str. ATCC 3502 5185553 YP_001253821.1 CDS CBO1300 NC_009495.1 1416260 1417354 D hypothetical protein 1416260..1417354 Clostridium botulinum A str. ATCC 3502 5185555 YP_001253822.1 CDS CBO1301 NC_009495.1 1417582 1417746 D Highly similar to CBO2803 (89.0 38d) and CBO3279 (89.2 38d); hypothetical protein 1417582..1417746 Clostridium botulinum A str. ATCC 3502 5185556 YP_001253823.1 CDS CBO1302 NC_009495.1 1418081 1418884 D hypothetical protein 1418081..1418884 Clostridium botulinum A str. ATCC 3502 5185557 YP_001253824.1 CDS CBO1303 NC_009495.1 1419160 1419426 D hypothetical protein 1419160..1419426 Clostridium botulinum A str. ATCC 3502 5185558 YP_001253825.1 CDS CBO1304 NC_009495.1 1419463 1421898 D copper-translocating P-type ATPase 1419463..1421898 Clostridium botulinum A str. ATCC 3502 5185559 YP_001253826.1 CDS CBO1305 NC_009495.1 1422021 1422236 D copper chaperone CopZ 1422021..1422236 Clostridium botulinum A str. ATCC 3502 5185560 YP_001253827.1 CDS CBO1306 NC_009495.1 1422618 1424990 D cation-transporting ATPase, P-type 1422618..1424990 Clostridium botulinum A str. ATCC 3502 5185561 YP_001253828.1 CDS CBO1308 NC_009495.1 1425468 1427186 D ABC transporter permease/ATP-binding protein 1425468..1427186 Clostridium botulinum A str. ATCC 3502 5185563 YP_001253829.1 CDS CBO1309 NC_009495.1 1427524 1428318 D protease 1427524..1428318 Clostridium botulinum A str. ATCC 3502 5185564 YP_001253830.1 CDS CBO1310 NC_009495.1 1428482 1428838 D dinitrogenase iron-molybdenum cofactor family protein 1428482..1428838 Clostridium botulinum A str. ATCC 3502 5185565 YP_001253831.1 CDS CBO1311 NC_009495.1 1429257 1430150 D DegV family protein 1429257..1430150 Clostridium botulinum A str. ATCC 3502 5185566 YP_001253832.1 CDS CBO1312 NC_009495.1 1430187 1430651 R 5-nitroimidazole antibiotic resistance protein complement(1430187..1430651) Clostridium botulinum A str. ATCC 3502 5185567 YP_001253833.1 CDS CBO1313 NC_009495.1 1430964 1431191 D hypothetical protein 1430964..1431191 Clostridium botulinum A str. ATCC 3502 5185568 YP_001253834.1 CDS CBO1314 NC_009495.1 1431216 1431644 D HIT family protein 1431216..1431644 Clostridium botulinum A str. ATCC 3502 5185569 YP_001253835.1 CDS CBO1315 NC_009495.1 1431800 1432174 R hypothetical protein complement(1431800..1432174) Clostridium botulinum A str. ATCC 3502 5185570 YP_001253836.1 CDS CBO1316 NC_009495.1 1432467 1433234 D type IV leader peptidase 1432467..1433234 Clostridium botulinum A str. ATCC 3502 5185571 YP_001253837.1 CDS CBO1317 NC_009495.1 1433826 1434953 D hypothetical protein 1433826..1434953 Clostridium botulinum A str. ATCC 3502 5185572 YP_001253838.1 CDS trkA NC_009495.1 1435741 1437108 D involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 1435741..1437108 Clostridium botulinum A str. ATCC 3502 5185573 YP_001253839.1 CDS CBO1319 NC_009495.1 1437105 1438550 D Trk system potassium uptake protein TrkH 1437105..1438550 Clostridium botulinum A str. ATCC 3502 5185574 YP_001253840.1 CDS CBO1320 NC_009495.1 1438741 1439022 D hypothetical protein 1438741..1439022 Clostridium botulinum A str. ATCC 3502 5185575 YP_001253841.1 CDS CBO1321 NC_009495.1 1439124 1441691 D helicase, UvrD/REP/exonuclease 1439124..1441691 Clostridium botulinum A str. ATCC 3502 5185576 YP_001253842.1 CDS CBO1322 NC_009495.1 1442994 1444124 R hypothetical protein complement(1442994..1444124) Clostridium botulinum A str. ATCC 3502 5185577 YP_001253843.1 CDS CBO1323 NC_009495.1 1444139 1444513 R GntR family transcriptional regulator complement(1444139..1444513) Clostridium botulinum A str. ATCC 3502 5185578 YP_001253844.1 CDS CBO1324 NC_009495.1 1444855 1445634 R cell wall hydrolase complement(1444855..1445634) Clostridium botulinum A str. ATCC 3502 5185579 YP_001253845.1 CDS rbr NC_009495.1 1446393 1446980 D rubrerythrin 1446393..1446980 Clostridium botulinum A str. ATCC 3502 5187891 YP_001253846.1 CDS CBO1326 NC_009495.1 1447275 1448729 D cell wall hydrolase 1447275..1448729 Clostridium botulinum A str. ATCC 3502 5185581 YP_001253847.1 CDS crr NC_009495.1 1448902 1450932 R PTS system, glucose-specific, IIABC component complement(1448902..1450932) Clostridium botulinum A str. ATCC 3502 5185582 YP_001253848.1 CDS CBO1328 NC_009495.1 1451384 1452031 D UDP pyrophosphate synthetase-like protein 1451384..1452031 Clostridium botulinum A str. ATCC 3502 5185583 YP_001253849.1 CDS CBO1329 NC_009495.1 1452418 1452927 D hypothetical protein 1452418..1452927 Clostridium botulinum A str. ATCC 3502 5185584 YP_001253850.1 CDS CBO1330 NC_009495.1 1453222 1453635 D transcriptional regulator 1453222..1453635 Clostridium botulinum A str. ATCC 3502 5185585 YP_001253851.1 CDS CBO1331 NC_009495.1 1453844 1455730 D oxidoreductase, acetyl-CoA synthase subunit 1453844..1455730 Clostridium botulinum A str. ATCC 3502 5185586 YP_001253852.1 CDS CBO1332 NC_009495.1 1455877 1456320 D nitrate reductase, iron-sulfur subunit 1455877..1456320 Clostridium botulinum A str. ATCC 3502 5185587 YP_001253853.1 CDS CBO1333 NC_009495.1 1456519 1457745 D nitrate reductase, NADH oxidase subunit 1456519..1457745 Clostridium botulinum A str. ATCC 3502 5185588 YP_001253854.1 CDS CBO1334 NC_009495.1 1457787 1458971 R transporter complement(1457787..1458971) Clostridium botulinum A str. ATCC 3502 5185589 YP_001253855.1 CDS CBO1335 NC_009495.1 1459149 1459871 R Crp/Fnr family transcriptional regulator complement(1459149..1459871) Clostridium botulinum A str. ATCC 3502 5185590 YP_001253856.1 CDS CBO1336 NC_009495.1 1459952 1461151 D major facilitator superfamily protein 1459952..1461151 Clostridium botulinum A str. ATCC 3502 5185591 YP_001253857.1 CDS CBO1337 NC_009495.1 1461454 1462368 D iron chelate uptake ABC transporter FeCT family, solute-binding protein 1461454..1462368 Clostridium botulinum A str. ATCC 3502 5185592 YP_001253858.1 CDS CBO1338 NC_009495.1 1462390 1463388 D iron chelate uptake ABC transporter FeCT family, permease 1462390..1463388 Clostridium botulinum A str. ATCC 3502 5185593 YP_001253859.1 CDS CBO1339 NC_009495.1 1463391 1464152 D iron ABC transporter ATP-binding protein 1463391..1464152 Clostridium botulinum A str. ATCC 3502 5185594 YP_001253860.1 CDS CBO1340 NC_009495.1 1464373 1464708 R hypothetical protein complement(1464373..1464708) Clostridium botulinum A str. ATCC 3502 5185595 YP_001253861.1 CDS CBO1341 NC_009495.1 1464783 1466060 R (Fe-S)-binding protein complement(1464783..1466060) Clostridium botulinum A str. ATCC 3502 5185596 YP_001253862.1 CDS CBO1342 NC_009495.1 1466467 1467312 D RpiR family transcriptional regulator 1466467..1467312 Clostridium botulinum A str. ATCC 3502 5185597 YP_001253863.1 CDS murQ NC_009495.1 1467592 1468500 D catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase 1467592..1468500 Clostridium botulinum A str. ATCC 3502 5185598 YP_001253864.1 CDS CBO1344 NC_009495.1 1468613 1469968 D PTS system transporter subunit IIBC 1468613..1469968 Clostridium botulinum A str. ATCC 3502 5185599 YP_001253865.1 CDS CBO1346 NC_009495.1 1470392 1471468 D hypothetical protein 1470392..1471468 Clostridium botulinum A str. ATCC 3502 5185601 YP_001253866.1 CDS CBO1347 NC_009495.1 1471800 1472408 D hypothetical protein 1471800..1472408 Clostridium botulinum A str. ATCC 3502 5185602 YP_001253867.1 CDS CBO1348 NC_009495.1 1472691 1473332 D hypothetical protein 1472691..1473332 Clostridium botulinum A str. ATCC 3502 5185603 YP_001253868.1 CDS CBO1349 NC_009495.1 1473447 1473641 D hypothetical protein 1473447..1473641 Clostridium botulinum A str. ATCC 3502 5185604 YP_001253869.1 CDS CBO1350 NC_009495.1 1473638 1475509 D hypothetical protein 1473638..1475509 Clostridium botulinum A str. ATCC 3502 5185605 YP_001253870.1 CDS CBO1351 NC_009495.1 1475562 1476800 D cell-surface protein 1475562..1476800 Clostridium botulinum A str. ATCC 3502 5185606 YP_001253871.1 CDS CBO1352 NC_009495.1 1476800 1477342 D hypothetical protein 1476800..1477342 Clostridium botulinum A str. ATCC 3502 5185607 YP_001253872.1 CDS CBO1353 NC_009495.1 1477512 1477784 R . High content of Gln residues; hypothetical protein complement(1477512..1477784) Clostridium botulinum A str. ATCC 3502 5185608 YP_001253873.1 CDS CBO1354 NC_009495.1 1478288 1480006 D methyl-accepting chemotaxis protein 1478288..1480006 Clostridium botulinum A str. ATCC 3502 5185609 YP_001253874.1 CDS CBO1355 NC_009495.1 1480464 1482053 D peptide/opine/nickel uptake ABC transporter PepT family, substrate-binding protein 1480464..1482053 Clostridium botulinum A str. ATCC 3502 5185610 YP_001253875.1 CDS CBO1356 NC_009495.1 1482050 1483006 D peptide/opine/nickel uptake ABC transporter permease 1482050..1483006 Clostridium botulinum A str. ATCC 3502 5185611 YP_001253876.1 CDS CBO1357 NC_009495.1 1483015 1483815 D peptide/opine/nickel uptake ABC transporter PepT family, permease 1483015..1483815 Clostridium botulinum A str. ATCC 3502 5185612 YP_001253877.1 CDS CBO1358 NC_009495.1 1483914 1484708 D peptide/opine/nickel uptake ABC transporter ATP-binding protein 1483914..1484708 Clostridium botulinum A str. ATCC 3502 5185613 YP_001253878.1 CDS CBO1359 NC_009495.1 1484702 1485514 D peptide/opine/nickel uptake ABC transporter ATP-binding protein 1484702..1485514 Clostridium botulinum A str. ATCC 3502 5185614 YP_001253879.1 CDS CBO1360 NC_009495.1 1485958 1486470 D lipoprotein 1485958..1486470 Clostridium botulinum A str. ATCC 3502 5185615 YP_001253880.1 CDS CBO1361 NC_009495.1 1486763 1487551 R manganese/zinc/iron chelate uptake ABC transporter permease complement(1486763..1487551) Clostridium botulinum A str. ATCC 3502 5185616 YP_001253881.1 CDS CBO1362 NC_009495.1 1487551 1488204 R manganese/zinc/iron chelate uptake ABC transporter ATP-binding protein complement(1487551..1488204) Clostridium botulinum A str. ATCC 3502 5185617 YP_001253882.1 CDS CBO1363 NC_009495.1 1488425 1489363 D manganese/zinc/iron chelate uptake ABC transporter Mzt family, substrate-binding protein 1488425..1489363 Clostridium botulinum A str. ATCC 3502 5185618 YP_001253883.1 CDS CBO1364 NC_009495.1 1489477 1489968 R limited similarity to the database matches mentioned; hypothetical protein complement(1489477..1489968) Clostridium botulinum A str. ATCC 3502 5185619 YP_001253884.1 CDS CBO1365 NC_009495.1 1490571 1492337 D helicase domain-containing protein 1490571..1492337 Clostridium botulinum A str. ATCC 3502 5185620 YP_001253885.1 CDS CBO1366 NC_009495.1 1492472 1493020 D signaling protein 1492472..1493020 Clostridium botulinum A str. ATCC 3502 5185621 YP_001253886.1 CDS CBO1368 NC_009495.1 1493954 1494961 D lipoprotein 1493954..1494961 Clostridium botulinum A str. ATCC 3502 5185623 YP_001253887.1 CDS CBO1369 NC_009495.1 1494933 1495694 D ABC transporter permease 1494933..1495694 Clostridium botulinum A str. ATCC 3502 5185624 YP_001253888.1 CDS CBO1370 NC_009495.1 1495835 1496434 D this CDS is shorter at the C-terminus relative to most database matches; ABC transporter ATP-binding protein 1495835..1496434 Clostridium botulinum A str. ATCC 3502 5185625 YP_001253889.1 CDS CBO1372 NC_009495.1 1496713 1497186 D FUR family transcriptional regulator 1496713..1497186 Clostridium botulinum A str. ATCC 3502 5185627 YP_001253890.1 CDS CBO1373 NC_009495.1 1497156 1497629 D hypothetical protein 1497156..1497629 Clostridium botulinum A str. ATCC 3502 5185628 YP_001253891.1 CDS CBO1374 NC_009495.1 1497756 1499027 D zinc carboxypeptidase 1497756..1499027 Clostridium botulinum A str. ATCC 3502 5185629 YP_001253892.1 CDS CBO1376 NC_009495.1 1499317 1500357 D member of metallo-beta-lactamase; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z 1499317..1500357 Clostridium botulinum A str. ATCC 3502 5185631 YP_001253893.1 CDS CBO1377 NC_009495.1 1500703 1502022 D amino acid permease 1500703..1502022 Clostridium botulinum A str. ATCC 3502 5185632 YP_001253894.1 CDS CBO1378 NC_009495.1 1502167 1502544 D hypothetical protein 1502167..1502544 Clostridium botulinum A str. ATCC 3502 5185633 YP_001253895.1 CDS CBO1379 NC_009495.1 1502557 1503714 D sensor histidine kinase 1502557..1503714 Clostridium botulinum A str. ATCC 3502 5187170 YP_001253896.1 CDS CBO1380 NC_009495.1 1503897 1504550 D LuxR family transcriptional regulator 1503897..1504550 Clostridium botulinum A str. ATCC 3502 5185635 YP_001253897.1 CDS CBO1381 NC_009495.1 1504901 1505839 D ABC transporter ATP-binding protein 1504901..1505839 Clostridium botulinum A str. ATCC 3502 5185636 YP_001253898.1 CDS CBO1382 NC_009495.1 1505945 1507123 D ABC transporter permease 1505945..1507123 Clostridium botulinum A str. ATCC 3502 5187709 YP_001253899.1 CDS CBO1383 NC_009495.1 1507125 1508225 D hypothetical protein 1507125..1508225 Clostridium botulinum A str. ATCC 3502 5187165 YP_001253900.1 CDS CBO1384 NC_009495.1 1508229 1508462 D hypothetical protein 1508229..1508462 Clostridium botulinum A str. ATCC 3502 5185639 YP_001253901.1 CDS CBO1385 NC_009495.1 1509153 1509704 R nitroreductase complement(1509153..1509704) Clostridium botulinum A str. ATCC 3502 5185640 YP_001253902.1 CDS CBO1386 NC_009495.1 1510262 1510753 R hypothetical protein complement(1510262..1510753) Clostridium botulinum A str. ATCC 3502 5187310 YP_001253903.1 CDS cspB NC_009495.1 1510921 1511124 R Also similar to CBO0282 (63.9 38d.) and CBO1772 (50.7 38d.).; major cold shock protein complement(1510921..1511124) Clostridium botulinum A str. ATCC 3502 5185642 YP_001253904.1 CDS CBO1388 NC_009495.1 1511391 1512854 D aminoacyl-histidine dipeptidase 1511391..1512854 Clostridium botulinum A str. ATCC 3502 5187131 YP_001253905.1 CDS CBO1389 NC_009495.1 1512912 1513805 D exported protein 1512912..1513805 Clostridium botulinum A str. ATCC 3502 5185644 YP_001253906.1 CDS CBO1390 NC_009495.1 1514203 1515039 D catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxamine kinase 1514203..1515039 Clostridium botulinum A str. ATCC 3502 5185645 YP_001253907.1 CDS CBO1391 NC_009495.1 1515327 1515965 R methionine-S-sulfoxide reductase complement(1515327..1515965) Clostridium botulinum A str. ATCC 3502 5185646 YP_001253908.1 CDS CBO1391A NC_009495.1 1516515 1517279 D peptide ABC transporter Pep4E family, ATP-binding protein 1516515..1517279 Clostridium botulinum A str. ATCC 3502 5204270 YP_001253909.1 CDS CBO1392 NC_009495.1 1517266 1519155 D peptide ABC transporter Pep4E family, permease 1517266..1519155 Clostridium botulinum A str. ATCC 3502 5185647 YP_001253910.1 CDS CBO1393 NC_009495.1 1519328 1519825 D hypothetical protein 1519328..1519825 Clostridium botulinum A str. ATCC 3502 5188008 YP_001253911.1 CDS CBO1394 NC_009495.1 1520265 1520966 D DNA-binding response regulator 1520265..1520966 Clostridium botulinum A str. ATCC 3502 5187205 YP_001253912.1 CDS CBO1395 NC_009495.1 1520968 1521945 D sensor histidine kinase 1520968..1521945 Clostridium botulinum A str. ATCC 3502 5187552 YP_001253913.1 CDS CBO1396 NC_009495.1 1522004 1522759 D peptide ABC transporter Pep4E family, ATP-binding protein 1522004..1522759 Clostridium botulinum A str. ATCC 3502 5185651 YP_001253914.1 CDS CBO1397 NC_009495.1 1522749 1524557 D peptide ABC transporter Pep4E family, permease 1522749..1524557 Clostridium botulinum A str. ATCC 3502 5185652 YP_001253915.1 CDS CBO1398 NC_009495.1 1524626 1525348 D hypothetical protein 1524626..1525348 Clostridium botulinum A str. ATCC 3502 5187057 YP_001253916.1 CDS CBO1399 NC_009495.1 1525724 1526728 D hypothetical protein 1525724..1526728 Clostridium botulinum A str. ATCC 3502 5187157 YP_001253917.1 CDS CBO1400 NC_009495.1 1527112 1528290 D aminotransferase, classes I and II 1527112..1528290 Clostridium botulinum A str. ATCC 3502 5187043 YP_001253918.1 CDS CBO1401 NC_009495.1 1528378 1529043 D amino acid ABC transporter permease 1528378..1529043 Clostridium botulinum A str. ATCC 3502 5187367 YP_001253919.1 CDS CBO1402 NC_009495.1 1529062 1529799 D polar amino acid ABC transporter ATP-binding protein 1529062..1529799 Clostridium botulinum A str. ATCC 3502 5187715 YP_001253920.1 CDS CBO1403 NC_009495.1 1530194 1530442 D DNA-binding protein 1530194..1530442 Clostridium botulinum A str. ATCC 3502 5185658 YP_001253921.1 CDS CBO1404 NC_009495.1 1530641 1531915 R D-alanyl-D-alanine carboxypeptidase complement(1530641..1531915) Clostridium botulinum A str. ATCC 3502 5185659 YP_001253922.1 CDS CBO1405 NC_009495.1 1532214 1532837 D pyrophosphatase, MutT/nudix family 1532214..1532837 Clostridium botulinum A str. ATCC 3502 5185660 YP_001253923.1 CDS CBO1406 NC_009495.1 1532888 1533235 R hypothetical protein complement(1532888..1533235) Clostridium botulinum A str. ATCC 3502 5185661 YP_001253924.1 CDS bdh NC_009495.1 1533571 1534734 D NADH-dependent butanol dehydrogenase 1533571..1534734 Clostridium botulinum A str. ATCC 3502 5187111 YP_001253925.1 CDS CBO1408 NC_009495.1 1535118 1535342 D hypothetical protein 1535118..1535342 Clostridium botulinum A str. ATCC 3502 5185663 YP_001253926.1 CDS CBO1409 NC_009495.1 1535500 1537035 D C4-dicarboxylate transporter 1535500..1537035 Clostridium botulinum A str. ATCC 3502 5185664 YP_001253927.1 CDS CBO1410 NC_009495.1 1537174 1538655 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(1537174..1538655) Clostridium botulinum A str. ATCC 3502 5185665 YP_001253928.1 CDS CBO1411 NC_009495.1 1539112 1539918 D polar amino acid ABC transporter amino acid-binding protein 1539112..1539918 Clostridium botulinum A str. ATCC 3502 5185666 YP_001253929.1 CDS CBO1412 NC_009495.1 1539920 1540579 D amino acid ABC transporter permease 1539920..1540579 Clostridium botulinum A str. ATCC 3502 5185667 YP_001253930.1 CDS CBO1413 NC_009495.1 1540710 1541258 D hypothetical protein 1540710..1541258 Clostridium botulinum A str. ATCC 3502 5185668 YP_001253931.1 CDS CBO1414 NC_009495.1 1541353 1543365 D ATP-dependent DNA helicase 1541353..1543365 Clostridium botulinum A str. ATCC 3502 5185669 YP_001253932.1 CDS CBO1416 NC_009495.1 1544142 1544492 D hypothetical protein 1544142..1544492 Clostridium botulinum A str. ATCC 3502 5185671 YP_001253933.1 CDS CBO1417 NC_009495.1 1544615 1544782 D hypothetical protein 1544615..1544782 Clostridium botulinum A str. ATCC 3502 5185672 YP_001253934.1 CDS CBO1418 NC_009495.1 1544892 1545299 D GNAT family acetyltransferase 1544892..1545299 Clostridium botulinum A str. ATCC 3502 5185673 YP_001253935.1 CDS CBO1419 NC_009495.1 1545461 1545940 D hypothetical protein 1545461..1545940 Clostridium botulinum A str. ATCC 3502 5185674 YP_001253936.1 CDS CBO1420 NC_009495.1 1545996 1546187 D hypothetical protein 1545996..1546187 Clostridium botulinum A str. ATCC 3502 5185675 YP_001253937.1 CDS CBO1421 NC_009495.1 1546463 1546657 D Highly similar to the prophage encoded CBO1747 (95.3 38d); phage protein 1546463..1546657 Clostridium botulinum A str. ATCC 3502 5187452 YP_001253938.1 CDS uviB NC_009495.1 1546881 1547084 D bacteriocin UviB 1546881..1547084 Clostridium botulinum A str. ATCC 3502 5187442 YP_001253939.1 CDS CBO1423 NC_009495.1 1547077 1547259 D hypothetical protein 1547077..1547259 Clostridium botulinum A str. ATCC 3502 5185678 YP_001253940.1 CDS CBO1424 NC_009495.1 1547259 1548086 D Also similar to prophage encoded CBO1751, CBO1653,CBO3016 and CBO2325.; N-acetylmuramoyl-L-alanine amidase 1547259..1548086 Clostridium botulinum A str. ATCC 3502 5185679 YP_001253941.1 CDS CBO1425 NC_009495.1 1548454 1548672 D hypothetical protein 1548454..1548672 Clostridium botulinum A str. ATCC 3502 5185680 YP_001253942.1 CDS CBO1426 NC_009495.1 1548674 1548979 D spore coat protein 1548674..1548979 Clostridium botulinum A str. ATCC 3502 5185681 YP_001253943.1 CDS CBO1427 NC_009495.1 1549638 1550615 D phage protein 1549638..1550615 Clostridium botulinum A str. ATCC 3502 5187444 YP_001253944.1 CDS CBO1429 NC_009495.1 1551748 1552050 D hypothetical protein 1551748..1552050 Clostridium botulinum A str. ATCC 3502 5185684 YP_001253945.1 CDS CBO1430 NC_009495.1 1552253 1554481 D Similarity to the Bacillus subtilis cell division protein FtsA is limited to the N-terminal region.; cell division protein FtsA 1552253..1554481 Clostridium botulinum A str. ATCC 3502 5187188 YP_001253946.1 CDS CBO1431 NC_009495.1 1554701 1555879 D amidohydrolase 1554701..1555879 Clostridium botulinum A str. ATCC 3502 5185686 YP_001253947.1 CDS CBO1432 NC_009495.1 1555935 1556786 D N-acetylmuramoyl-L-alanine amidase 1555935..1556786 Clostridium botulinum A str. ATCC 3502 5187801 YP_001253948.1 CDS rluC NC_009495.1 1557266 1558219 D pseudouridine synthase 1557266..1558219 Clostridium botulinum A str. ATCC 3502 5187228 YP_001253949.1 CDS CBO1434 NC_009495.1 1558251 1559858 D Also similar to CBO3536 and CBO1435; stage V sporulation protein B 1558251..1559858 Clostridium botulinum A str. ATCC 3502 5185689 YP_001253950.1 CDS CBO1435 NC_009495.1 1559895 1561400 R Also similar to CBO1434 and CBO3536; polysaccharide biosynthesis family protein complement(1559895..1561400) Clostridium botulinum A str. ATCC 3502 5188009 YP_001253951.1 CDS CBO1436 NC_009495.1 1561733 1562296 D hypothetical protein 1561733..1562296 Clostridium botulinum A str. ATCC 3502 5187583 YP_001253952.1 CDS CBO1437 NC_009495.1 1562317 1562724 R hypothetical protein complement(1562317..1562724) Clostridium botulinum A str. ATCC 3502 5185692 YP_001253953.1 CDS CBO1438 NC_009495.1 1563823 1565022 D iron-containing alcohol dehydrogenase 1563823..1565022 Clostridium botulinum A str. ATCC 3502 5185693 YP_001253954.1 CDS CBO1439 NC_009495.1 1565383 1567701 D ATP-dependent protease 1565383..1567701 Clostridium botulinum A str. ATCC 3502 5185694 YP_001253955.1 CDS CBO1442 NC_009495.1 1569042 1570769 R Also similar to CBO1440 (pseudogene), CBO1443,CBO1444, CBO1445, CBO1446; secreted protease complement(1569042..1570769) Clostridium botulinum A str. ATCC 3502 5187227 YP_001253956.1 CDS CBO1443 NC_009495.1 1570906 1572684 R Also similar to CBO1440 (pseudogene), CBO1442,CBO1444, CBO1445, CBO1446; secreted protease complement(1570906..1572684) Clostridium botulinum A str. ATCC 3502 5187584 YP_001253957.1 CDS CBO1444 NC_009495.1 1572800 1574584 R Also similar to CBO1440 (pseudogene), CBO1442,CBO1443, CBO1445, CBO1446; secreted protease complement(1572800..1574584) Clostridium botulinum A str. ATCC 3502 5185699 YP_001253958.1 CDS CBO1445 NC_009495.1 1574704 1576449 R Also similar to CBO1440 (pseudogene), CBO1442,CBO1443, CBO1444, CBO1446; secreted protease complement(1574704..1576449) Clostridium botulinum A str. ATCC 3502 5187838 YP_001253959.1 CDS CBO1446 NC_009495.1 1576483 1578225 R Also similar to CBO1440 (pseudogene), CBO1442,CBO1443, CBO1444, CBO1445; secreted protease complement(1576483..1578225) Clostridium botulinum A str. ATCC 3502 5187044 YP_001253960.1 CDS nadC NC_009495.1 1578828 1579664 R nicotinate-nucleotide pyrophosphorylase complement(1578828..1579664) Clostridium botulinum A str. ATCC 3502 5185702 YP_001253961.1 CDS nadB NC_009495.1 1579645 1580946 R catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase complement(1579645..1580946) Clostridium botulinum A str. ATCC 3502 5187557 YP_001253962.1 CDS nadA NC_009495.1 1580949 1581863 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(1580949..1581863) Clostridium botulinum A str. ATCC 3502 5185703 YP_001253963.1 CDS CBO1449 NC_009495.1 1582235 1583161 D hypothetical protein 1582235..1583161 Clostridium botulinum A str. ATCC 3502 5185704 YP_001253964.1 CDS CBO1450 NC_009495.1 1583258 1583896 R Also similar to CBO1589 (34.9 38d.).; hemolysin III complement(1583258..1583896) Clostridium botulinum A str. ATCC 3502 5185705 YP_001253965.1 CDS CBO1451 NC_009495.1 1584017 1585114 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(1584017..1585114) Clostridium botulinum A str. ATCC 3502 5185706 YP_001253966.1 CDS mraZ NC_009495.1 1585849 1586277 D MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 1585849..1586277 Clostridium botulinum A str. ATCC 3502 5185708 YP_001253967.1 CDS mraW NC_009495.1 1586357 1587286 D S-adenosyl-methyltransferase MraW 1586357..1587286 Clostridium botulinum A str. ATCC 3502 5185709 YP_001253968.1 CDS CBO1455 NC_009495.1 1587368 1587871 D cell division protein FtsL 1587368..1587871 Clostridium botulinum A str. ATCC 3502 5185710 YP_001253969.1 CDS spoVD NC_009495.1 1587887 1590067 D stage V sporulation protein D 1587887..1590067 Clostridium botulinum A str. ATCC 3502 5185711 YP_001253970.1 CDS murE NC_009495.1 1590297 1591748 D involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1590297..1591748 Clostridium botulinum A str. ATCC 3502 5185712 YP_001253971.1 CDS murF NC_009495.1 1591774 1593162 D UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 1591774..1593162 Clostridium botulinum A str. ATCC 3502 5187193 YP_001253972.1 CDS mraY NC_009495.1 1593198 1594151 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1593198..1594151 Clostridium botulinum A str. ATCC 3502 5187973 YP_001253973.1 CDS ftsW NC_009495.1 1594230 1595342 D cell cycle protein, FtsW/RodA/SpoVE family 1594230..1595342 Clostridium botulinum A str. ATCC 3502 5185715 YP_001253974.1 CDS divIB NC_009495.1 1595661 1596431 D cell division protein FtsQ 1595661..1596431 Clostridium botulinum A str. ATCC 3502 5187324 YP_001253975.1 CDS CBO1462 NC_009495.1 1596442 1597155 D Also similar to CBO1464.; hypothetical protein 1596442..1597155 Clostridium botulinum A str. ATCC 3502 5185717 YP_001253976.1 CDS sbp NC_009495.1 1597189 1597539 D small basic protein 1597189..1597539 Clostridium botulinum A str. ATCC 3502 5187136 YP_001253977.1 CDS CBO1464 NC_009495.1 1597540 1598271 D Also similar to CBO1462.; hypothetical protein 1597540..1598271 Clostridium botulinum A str. ATCC 3502 5185719 YP_001253978.1 CDS CBO1465 NC_009495.1 1598364 1599035 D hypothetical protein 1598364..1599035 Clostridium botulinum A str. ATCC 3502 5187537 YP_001253979.1 CDS CBO1466 NC_009495.1 1599056 1599508 D hypothetical protein 1599056..1599508 Clostridium botulinum A str. ATCC 3502 5185721 YP_001253980.1 CDS CBO1467 NC_009495.1 1599525 1599800 D hypothetical protein 1599525..1599800 Clostridium botulinum A str. ATCC 3502 5185722 YP_001253981.1 CDS CBO1468 NC_009495.1 1599801 1600571 D hypothetical protein 1599801..1600571 Clostridium botulinum A str. ATCC 3502 5185723 YP_001253982.1 CDS divIVA NC_009495.1 1600587 1601246 D cell-division initiation protein DivIVA 1600587..1601246 Clostridium botulinum A str. ATCC 3502 5185724 YP_001253983.1 CDS aroB NC_009495.1 1601654 1602742 D 3-dehydroquinate synthase 1601654..1602742 Clostridium botulinum A str. ATCC 3502 5185725 YP_001253984.1 CDS mtn NC_009495.1 1602743 1603435 D enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1602743..1603435 Clostridium botulinum A str. ATCC 3502 5185726 YP_001253985.1 CDS CBO1472 NC_009495.1 1603556 1604356 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase 1603556..1604356 Clostridium botulinum A str. ATCC 3502 5185727 YP_001253986.1 CDS aroA NC_009495.1 1604490 1605818 D catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1604490..1605818 Clostridium botulinum A str. ATCC 3502 5185728 YP_001253987.1 CDS CBO1474 NC_009495.1 1606035 1606658 D RNA polymerase-binding protein DksA 1606035..1606658 Clostridium botulinum A str. ATCC 3502 5187024 YP_001253988.1 CDS lspA NC_009495.1 1607062 1607505 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1607062..1607505 Clostridium botulinum A str. ATCC 3502 5187025 YP_001253989.1 CDS rluD1 NC_009495.1 1607509 1608426 D pseudouridine synthase 1607509..1608426 Clostridium botulinum A str. ATCC 3502 5187982 YP_001253990.1 CDS pyrR NC_009495.1 1608913 1609449 D regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 1608913..1609449 Clostridium botulinum A str. ATCC 3502 5185733 YP_001253991.1 CDS pyrP NC_009495.1 1609493 1610836 D uracil permease 1609493..1610836 Clostridium botulinum A str. ATCC 3502 5185734 YP_001253992.1 CDS exoA NC_009495.1 1611426 1612187 D exodeoxyribonuclease III 1611426..1612187 Clostridium botulinum A str. ATCC 3502 5185735 YP_001253993.1 CDS CBO1481 NC_009495.1 1612410 1613552 D methyltransferase 1612410..1613552 Clostridium botulinum A str. ATCC 3502 5185736 YP_001253994.1 CDS CBO1482 NC_009495.1 1613783 1614328 D hypothetical protein 1613783..1614328 Clostridium botulinum A str. ATCC 3502 5185737 YP_001253995.1 CDS modA NC_009495.1 1614506 1615321 D molybdate ABC transporter periplasmic molybdate-binding protein 1614506..1615321 Clostridium botulinum A str. ATCC 3502 5185738 YP_001253996.1 CDS modB NC_009495.1 1615331 1616002 D molybdate ABC transporter permease 1615331..1616002 Clostridium botulinum A str. ATCC 3502 5185739 YP_001253997.1 CDS modC NC_009495.1 1616330 1617001 D molybdate ABC transporter ATP-binding protein 1616330..1617001 Clostridium botulinum A str. ATCC 3502 5185740 YP_001253998.1 CDS CBO1486 NC_009495.1 1617055 1617615 D hypothetical protein 1617055..1617615 Clostridium botulinum A str. ATCC 3502 5185741 YP_001253999.1 CDS CBO1487 NC_009495.1 1617997 1618920 D patatin-like phospholipase 1617997..1618920 Clostridium botulinum A str. ATCC 3502 5185742 YP_001254000.1 CDS CBO1488 NC_009495.1 1619220 1619375 D hypothetical protein 1619220..1619375 Clostridium botulinum A str. ATCC 3502 5185743 YP_001254001.1 CDS CBO1489 NC_009495.1 1619648 1620700 D Also similar to CBO1498 (40.6 38d.).; methylcobamide:CoM methyltransferase 1619648..1620700 Clostridium botulinum A str. ATCC 3502 5185744 YP_001254002.1 CDS CBO1490 NC_009495.1 1620788 1622185 D Na+/H+ antiporter 1620788..1622185 Clostridium botulinum A str. ATCC 3502 5185745 YP_001254003.1 CDS CBO1491 NC_009495.1 1622327 1624057 D (Fe-S)-binding protein 1622327..1624057 Clostridium botulinum A str. ATCC 3502 5185746 YP_001254004.1 CDS cobW NC_009495.1 1624147 1625076 D CobW/P47K family protein 1624147..1625076 Clostridium botulinum A str. ATCC 3502 5185747 YP_001254005.1 CDS CBO1493 NC_009495.1 1625099 1625971 D methylcobalamin:coenzyme M methyltransferase 1625099..1625971 Clostridium botulinum A str. ATCC 3502 5185748 YP_001254006.1 CDS mtbC NC_009495.1 1625997 1626659 D dimethylamine corrinoid protein 1625997..1626659 Clostridium botulinum A str. ATCC 3502 5185749 YP_001254007.1 CDS mtbA NC_009495.1 1626744 1627766 D catalyze the formation of methyl-coenzyme M from methylcobalamin and coenzyme M; methylcobalamin:coenzyme M methyltransferase 1626744..1627766 Clostridium botulinum A str. ATCC 3502 5185750 YP_001254008.1 CDS CBO1496 NC_009495.1 1627913 1628131 R hypothetical protein complement(1627913..1628131) Clostridium botulinum A str. ATCC 3502 5185751 YP_001254009.1 CDS CBO1497 NC_009495.1 1628440 1628601 D hypothetical protein 1628440..1628601 Clostridium botulinum A str. ATCC 3502 5185752 YP_001254010.1 CDS CBO1498 NC_009495.1 1628703 1629782 D Also similar to CBO1489 (40.6 38d.).; methylcobamide:CoM methyltransferase 1628703..1629782 Clostridium botulinum A str. ATCC 3502 5185753 YP_001254011.1 CDS metN2 NC_009495.1 1629805 1630767 D D-methionine ABC transporter ATP-binding protein 1629805..1630767 Clostridium botulinum A str. ATCC 3502 5185754 YP_001254012.1 CDS metI2 NC_009495.1 1630769 1631425 D methionine ABC transporter permease 1630769..1631425 Clostridium botulinum A str. ATCC 3502 5185755 YP_001254013.1 CDS metQ3 NC_009495.1 1631569 1632387 D lipoprotein, NLPA family 1631569..1632387 Clostridium botulinum A str. ATCC 3502 5185756 YP_001254014.1 CDS CBO1502 NC_009495.1 1632478 1633047 R MORN repeat protein complement(1632478..1633047) Clostridium botulinum A str. ATCC 3502 5185757 YP_001254015.1 CDS CBO1503 NC_009495.1 1633625 1634644 D FAD/FMN-binding oxidoreductase 1633625..1634644 Clostridium botulinum A str. ATCC 3502 5185758 YP_001254016.1 CDS asnA NC_009495.1 1634973 1635995 D catalyzes the formation of asparagine from aspartate and ammonia; asparagine synthetase AsnA 1634973..1635995 Clostridium botulinum A str. ATCC 3502 5187341 YP_001254017.1 CDS CBO1505 NC_009495.1 1636104 1637669 R oxidoreductase, FAD dependent complement(1636104..1637669) Clostridium botulinum A str. ATCC 3502 5185760 YP_001254018.1 CDS CBO1506 NC_009495.1 1638024 1639883 D This CDS is shorter at the C-terminus relative to the database matches.; DNA topoisomerase 1638024..1639883 Clostridium botulinum A str. ATCC 3502 5185761 YP_001254019.1 CDS CBO1507 NC_009495.1 1639910 1641823 D mutS domain protein 1639910..1641823 Clostridium botulinum A str. ATCC 3502 5185762 YP_001254020.1 CDS CBO1508 NC_009495.1 1642140 1643276 D oxidoreductase, aldo/keto reductase 1642140..1643276 Clostridium botulinum A str. ATCC 3502 5185763 YP_001254021.1 CDS CBO1509 NC_009495.1 1643334 1643825 R hypothetical protein complement(1643334..1643825) Clostridium botulinum A str. ATCC 3502 5185764 YP_001254022.1 CDS CBO1510 NC_009495.1 1644062 1644760 D peptide ABC transporter Pep4E family, ATP-binding protein 1644062..1644760 Clostridium botulinum A str. ATCC 3502 5187438 YP_001254023.1 CDS CBO1513 NC_009495.1 1646984 1647607 D TetR family transcriptional regulator 1646984..1647607 Clostridium botulinum A str. ATCC 3502 5185768 YP_001254024.1 CDS CBO1514 NC_009495.1 1647969 1648520 D hypothetical protein 1647969..1648520 Clostridium botulinum A str. ATCC 3502 5187017 YP_001254025.1 CDS CBO1515 NC_009495.1 1648533 1649630 D carbohydrate uptake ABC transporter CUT1 family, ATP-binding protein 1648533..1649630 Clostridium botulinum A str. ATCC 3502 5185770 YP_001254026.1 CDS CBO1516 NC_009495.1 1649623 1650516 D carbohydrate uptake ABC transporter CUT1 family, permease 1649623..1650516 Clostridium botulinum A str. ATCC 3502 5185771 YP_001254027.1 CDS CBO1517 NC_009495.1 1650552 1651376 D carbohydrate uptake ABC transporter CUT1 family, permease 1650552..1651376 Clostridium botulinum A str. ATCC 3502 5185772 YP_001254028.1 CDS CBO1518 NC_009495.1 1651422 1652783 D carbohydrate uptake ABC transporter CUT1 family, carbohydrate-binding protein 1651422..1652783 Clostridium botulinum A str. ATCC 3502 5185773 YP_001254029.1 CDS ldh NC_009495.1 1653007 1653963 R L-lactate dehydrogenase complement(1653007..1653963) Clostridium botulinum A str. ATCC 3502 5187351 YP_001254030.1 CDS CBO1520 NC_009495.1 1654493 1655203 D GntR family transcriptional regulator 1654493..1655203 Clostridium botulinum A str. ATCC 3502 5185775 YP_001254031.1 CDS CBO1521 NC_009495.1 1655650 1656141 R redox family protein complement(1655650..1656141) Clostridium botulinum A str. ATCC 3502 5185776 YP_001254032.1 CDS CBO1522 NC_009495.1 1656372 1657319 D C4-dicarboxylate transporter/malic acid transport protein 1656372..1657319 Clostridium botulinum A str. ATCC 3502 5185777 YP_001254033.1 CDS CBO1523 NC_009495.1 1657391 1657543 R hypothetical protein complement(1657391..1657543) Clostridium botulinum A str. ATCC 3502 5185778 YP_001254034.1 CDS CBO1524 NC_009495.1 1658182 1660380 D sensory box-containing diguanylate cyclase 1658182..1660380 Clostridium botulinum A str. ATCC 3502 5185779 YP_001254035.1 CDS CBO1525 NC_009495.1 1660488 1660835 D hypothetical protein 1660488..1660835 Clostridium botulinum A str. ATCC 3502 5185780 YP_001254036.1 CDS CBO1526 NC_009495.1 1661203 1663275 D methyl-accepting chemotaxis protein 1661203..1663275 Clostridium botulinum A str. ATCC 3502 5185781 YP_001254037.1 CDS CBO1527 NC_009495.1 1663481 1663948 D MarR family transcriptional regulator 1663481..1663948 Clostridium botulinum A str. ATCC 3502 5185782 YP_001254038.1 CDS CBO1528 NC_009495.1 1663975 1664517 D hypothetical protein 1663975..1664517 Clostridium botulinum A str. ATCC 3502 5185783 YP_001254039.1 CDS CBO1529 NC_009495.1 1664666 1665019 R transcriptional regulator complement(1664666..1665019) Clostridium botulinum A str. ATCC 3502 5185784 YP_001254040.1 CDS CBO1530 NC_009495.1 1665025 1665195 R hypothetical protein complement(1665025..1665195) Clostridium botulinum A str. ATCC 3502 5185785 YP_001254041.1 CDS CBO1531 NC_009495.1 1665414 1665779 D glyoxalase 1665414..1665779 Clostridium botulinum A str. ATCC 3502 5185786 YP_001254042.1 CDS ogt NC_009495.1 1665808 1666278 D Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) in DNA. Repairs alkylated guanine in DNA by stoichiometrically transferring the alkyl group at the O-6 position to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated; methylated-DNA--protein-cysteine methyltransferase 1665808..1666278 Clostridium botulinum A str. ATCC 3502 5185787 YP_001254043.1 CDS CBO1533 NC_009495.1 1666335 1667522 D AraC family transcriptional regulator 1666335..1667522 Clostridium botulinum A str. ATCC 3502 5185788 YP_001254044.1 CDS CBO1534 NC_009495.1 1667687 1668895 D hypothetical protein 1667687..1668895 Clostridium botulinum A str. ATCC 3502 5185789 YP_001254045.1 CDS CBO1535 NC_009495.1 1668920 1669750 D hypothetical protein 1668920..1669750 Clostridium botulinum A str. ATCC 3502 5185790 YP_001254046.1 CDS CBO1536 NC_009495.1 1670140 1671252 D DNA-binding protein 1670140..1671252 Clostridium botulinum A str. ATCC 3502 5185791 YP_001254047.1 CDS CBO1537 NC_009495.1 1671305 1671934 D similar to the C-terminal region of many calcium-transporting ATPase including Clostridium perfringens. It is also similar over the full length of Bacillus hypothetical protein.; cation-transporting ATPase 1671305..1671934 Clostridium botulinum A str. ATCC 3502 5185792 YP_001254048.1 CDS CBO1538 NC_009495.1 1671991 1672860 D cation efflux family protein 1671991..1672860 Clostridium botulinum A str. ATCC 3502 5185793 YP_001254049.1 CDS CBO1539 NC_009495.1 1673346 1674749 D transporter 1673346..1674749 Clostridium botulinum A str. ATCC 3502 5187093 YP_001254050.1 CDS CBO1541 NC_009495.1 1675185 1675544 D iron-dependent repressor 1675185..1675544 Clostridium botulinum A str. ATCC 3502 5185796 YP_001254051.1 CDS CBO1542 NC_009495.1 1675642 1676049 D hypothetical protein 1675642..1676049 Clostridium botulinum A str. ATCC 3502 5185797 YP_001254052.1 CDS CBO1543 NC_009495.1 1676415 1677284 D HDIG domain protein 1676415..1677284 Clostridium botulinum A str. ATCC 3502 5185798 YP_001254053.1 CDS CBO1544 NC_009495.1 1677401 1677562 D hypothetical protein 1677401..1677562 Clostridium botulinum A str. ATCC 3502 5185799 YP_001254054.1 CDS CBO1545 NC_009495.1 1677739 1680375 R cation-transporting ATPase, P-type complement(1677739..1680375) Clostridium botulinum A str. ATCC 3502 5185800 YP_001254055.1 CDS CBO1546 NC_009495.1 1681168 1681530 D glyoxalase 1681168..1681530 Clostridium botulinum A str. ATCC 3502 5185801 YP_001254056.1 CDS CBO1547 NC_009495.1 1681706 1682341 R chloramphenicol acetyltransferase complement(1681706..1682341) Clostridium botulinum A str. ATCC 3502 5187614 YP_001254057.1 CDS CBO1548 NC_009495.1 1682460 1683155 D cyclic nucleotide-binding domain-containing protein 1682460..1683155 Clostridium botulinum A str. ATCC 3502 5185803 YP_001254058.1 CDS CBO1550 NC_009495.1 1683503 1684195 R transcription activator, effector binding domain-containing protein complement(1683503..1684195) Clostridium botulinum A str. ATCC 3502 5185805 YP_001254059.1 CDS CBO1551 NC_009495.1 1684283 1685227 R DeoR family transcriptional regulator complement(1684283..1685227) Clostridium botulinum A str. ATCC 3502 5185806 YP_001254060.1 CDS CBO1552 NC_009495.1 1685851 1686846 D 2-hydroxyglutaryl-CoA dehydratase subunit 1685851..1686846 Clostridium botulinum A str. ATCC 3502 5185807 YP_001254061.1 CDS CBO1553 NC_009495.1 1686963 1687724 D 2-hydroxyglutaryl-CoA dehydratase 1686963..1687724 Clostridium botulinum A str. ATCC 3502 5185808 YP_001254062.1 CDS CBO1554 NC_009495.1 1687742 1688173 D 6-pyruvoyl tetrahydrobiopterin synthase 1687742..1688173 Clostridium botulinum A str. ATCC 3502 5185809 YP_001254063.1 CDS CBO1555 NC_009495.1 1688175 1688840 D radical SAM domain protein 1688175..1688840 Clostridium botulinum A str. ATCC 3502 5185810 YP_001254064.1 CDS folE NC_009495.1 1688844 1689434 D involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 1688844..1689434 Clostridium botulinum A str. ATCC 3502 5185811 YP_001254065.1 CDS CBO1557 NC_009495.1 1689618 1690277 D hypothetical protein 1689618..1690277 Clostridium botulinum A str. ATCC 3502 5185812 YP_001254066.1 CDS CBO1558 NC_009495.1 1690392 1691348 D methyl-accepting chemotaxis protein 1690392..1691348 Clostridium botulinum A str. ATCC 3502 5185813 YP_001254067.1 CDS CBO1559 NC_009495.1 1691523 1692275 D hypothetical protein 1691523..1692275 Clostridium botulinum A str. ATCC 3502 5185814 YP_001254068.1 CDS CBO1560 NC_009495.1 1692597 1693016 D hypothetical protein 1692597..1693016 Clostridium botulinum A str. ATCC 3502 5185815 YP_001254069.1 CDS deoR NC_009495.1 1693038 1693976 D DeoR family transcriptional regulator 1693038..1693976 Clostridium botulinum A str. ATCC 3502 5185816 YP_001254070.1 CDS deoC NC_009495.1 1694268 1694906 D catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 1694268..1694906 Clostridium botulinum A str. ATCC 3502 5185818 YP_001254071.1 CDS rbsK NC_009495.1 1695250 1696161 D ribokinase 1695250..1696161 Clostridium botulinum A str. ATCC 3502 5185819 YP_001254072.1 CDS hisZ NC_009495.1 1696609 1697844 D May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase 1696609..1697844 Clostridium botulinum A str. ATCC 3502 5185820 YP_001254073.1 CDS hisG NC_009495.1 1697860 1698507 D short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase 1697860..1698507 Clostridium botulinum A str. ATCC 3502 5185821 YP_001254074.1 CDS hisD NC_009495.1 1698585 1699889 D catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 1698585..1699889 Clostridium botulinum A str. ATCC 3502 5185822 YP_001254075.1 CDS hisB NC_009495.1 1700039 1700629 D catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 1700039..1700629 Clostridium botulinum A str. ATCC 3502 5187720 YP_001254076.1 CDS hisH NC_009495.1 1700757 1701362 D with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 1700757..1701362 Clostridium botulinum A str. ATCC 3502 5185824 YP_001254077.1 CDS hisA NC_009495.1 1701359 1702087 D catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1701359..1702087 Clostridium botulinum A str. ATCC 3502 5185825 YP_001254078.1 CDS hisC NC_009495.1 1702084 1703148 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 1702084..1703148 Clostridium botulinum A str. ATCC 3502 5185826 YP_001254079.1 CDS hisF NC_009495.1 1703345 1704106 D catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 1703345..1704106 Clostridium botulinum A str. ATCC 3502 5185827 YP_001254080.1 CDS hisI NC_009495.1 1704259 1704591 D PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 1704259..1704591 Clostridium botulinum A str. ATCC 3502 5185828 YP_001254081.1 CDS hisE NC_009495.1 1704716 1705048 D catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 1704716..1705048 Clostridium botulinum A str. ATCC 3502 5185829 YP_001254082.1 CDS CBO1575 NC_009495.1 1705184 1705879 D hypothetical protein 1705184..1705879 Clostridium botulinum A str. ATCC 3502 5185830 YP_001254083.1 CDS CBO1576 NC_009495.1 1705893 1706114 D hypothetical protein 1705893..1706114 Clostridium botulinum A str. ATCC 3502 5185831 YP_001254084.1 CDS CBO1577 NC_009495.1 1706132 1706659 D hypothetical protein 1706132..1706659 Clostridium botulinum A str. ATCC 3502 5185832 YP_001254085.1 CDS CBO1578 NC_009495.1 1706690 1707580 R LysR family transcriptional regulator complement(1706690..1707580) Clostridium botulinum A str. ATCC 3502 5185833 YP_001254086.1 CDS CBO1579 NC_009495.1 1707844 1709094 D sodium:alanine symporter family protein 1707844..1709094 Clostridium botulinum A str. ATCC 3502 5185834 YP_001254087.1 CDS CBO1580 NC_009495.1 1709175 1710875 D pyridine nucleotide-disulfide oxidoreductase 1709175..1710875 Clostridium botulinum A str. ATCC 3502 5185835 YP_001254088.1 CDS CBO1581 NC_009495.1 1711028 1712284 D hypothetical protein 1711028..1712284 Clostridium botulinum A str. ATCC 3502 5185836 YP_001254089.1 CDS CBO1582 NC_009495.1 1712582 1713298 D antibiotic ABC transporter ATP-binding protein 1712582..1713298 Clostridium botulinum A str. ATCC 3502 5185837 YP_001254090.1 CDS CBO1583 NC_009495.1 1713301 1714032 D antibiotic ABC transporter permease 1713301..1714032 Clostridium botulinum A str. ATCC 3502 5187150 YP_001254091.1 CDS CBO1584 NC_009495.1 1714035 1714778 D antibiotic ABC transporter permease 1714035..1714778 Clostridium botulinum A str. ATCC 3502 5185839 YP_001254092.1 CDS CBO1585 NC_009495.1 1714895 1715554 D antibiotic ABC transporter 1714895..1715554 Clostridium botulinum A str. ATCC 3502 5185840 YP_001254093.1 CDS CBO1586 NC_009495.1 1715545 1716924 D antibiotic ABC transporter 1715545..1716924 Clostridium botulinum A str. ATCC 3502 5185841 YP_001254094.1 CDS arcA2 NC_009495.1 1717488 1718714 D Also similar to CBO0065 (57.03 38d).; arginine deiminase 1717488..1718714 Clostridium botulinum A str. ATCC 3502 5185842 YP_001254095.1 CDS arcD NC_009495.1 1718839 1720257 D arginine/ornithine antiporter 1718839..1720257 Clostridium botulinum A str. ATCC 3502 5185843 YP_001254096.1 CDS CBO1589 NC_009495.1 1720477 1721127 R Also similar to CBO1450 (34.9 38d.).; hemolysin complement(1720477..1721127) Clostridium botulinum A str. ATCC 3502 5185844 YP_001254097.1 CDS CBO1590 NC_009495.1 1721498 1722094 D hypothetical protein 1721498..1722094 Clostridium botulinum A str. ATCC 3502 5185845 YP_001254098.1 CDS CBO1592 NC_009495.1 1722465 1723025 D HD domain-containing protein 1722465..1723025 Clostridium botulinum A str. ATCC 3502 5185847 YP_001254099.1 CDS CBO1594 NC_009495.1 1723541 1723879 R ; Highly similar to CBO0900 (85.5 38d), CBO2273 (85.5 38d) and CBO2267 (93.7 0d); hypothetical protein complement(1723541..1723879) Clostridium botulinum A str. ATCC 3502 5185849 YP_001254100.1 CDS CBO1595 NC_009495.1 1724146 1727439 D Snf2 family helicase 1724146..1727439 Clostridium botulinum A str. ATCC 3502 5187554 YP_001254101.1 CDS CBO1596 NC_009495.1 1727629 1728444 D RelA/SpoT domain-containing protein 1727629..1728444 Clostridium botulinum A str. ATCC 3502 5185851 YP_001254102.1 CDS CBO1597 NC_009495.1 1728863 1729318 D hypothetical protein 1728863..1729318 Clostridium botulinum A str. ATCC 3502 5185852 YP_001254103.1 CDS CBO1598 NC_009495.1 1729565 1730554 D AraC family transcriptional regulator 1729565..1730554 Clostridium botulinum A str. ATCC 3502 5185853 YP_001254104.1 CDS CBO1599 NC_009495.1 1730703 1732457 D ABC transporter permease ATP-binding protein 1730703..1732457 Clostridium botulinum A str. ATCC 3502 5185854 YP_001254105.1 CDS CBO1600 NC_009495.1 1732459 1734183 D ABC transporter ATP-binding protein/permease 1732459..1734183 Clostridium botulinum A str. ATCC 3502 5185855 YP_001254106.1 CDS CBO1601 NC_009495.1 1734575 1735576 D LacI family transcriptional regulator 1734575..1735576 Clostridium botulinum A str. ATCC 3502 5185856 YP_001254107.1 CDS glcK NC_009495.1 1735880 1736827 D glucokinase 1735880..1736827 Clostridium botulinum A str. ATCC 3502 5185857 YP_001254108.1 CDS malL NC_009495.1 1737074 1738738 D glycosyl hydrolase family protein 1737074..1738738 Clostridium botulinum A str. ATCC 3502 5185859 YP_001254109.1 CDS CBO1605 NC_009495.1 1738780 1740438 D PTS system, glucose/glucoside family, IIBC component 1738780..1740438 Clostridium botulinum A str. ATCC 3502 5185860 YP_001254110.1 CDS CBO1606 NC_009495.1 1740442 1741233 D hypothetical protein 1740442..1741233 Clostridium botulinum A str. ATCC 3502 5185861 YP_001254111.1 CDS CBO1607 NC_009495.1 1741458 1742081 D hypothetical protein 1741458..1742081 Clostridium botulinum A str. ATCC 3502 5185862 YP_001254112.1 CDS CBO1608 NC_009495.1 1742370 1742705 R hypothetical protein complement(1742370..1742705) Clostridium botulinum A str. ATCC 3502 5185863 YP_001254113.1 CDS CBO1609 NC_009495.1 1743033 1744568 D . Contains a repetitive region: KEEVQYENIED(T/D)G(L/F); hypothetical protein 1743033..1744568 Clostridium botulinum A str. ATCC 3502 5185864 YP_001254114.1 CDS CBO1610 NC_009495.1 1744726 1745181 D hypothetical protein 1744726..1745181 Clostridium botulinum A str. ATCC 3502 5185865 YP_001254115.1 CDS CBO1612 NC_009495.1 1745477 1747639 R sensor histidine kinase complement(1745477..1747639) Clostridium botulinum A str. ATCC 3502 5185867 YP_001254116.1 CDS CBO1613 NC_009495.1 1747617 1748309 R DNA-binding response regulator complement(1747617..1748309) Clostridium botulinum A str. ATCC 3502 5187868 YP_001254117.1 CDS CBO1614 NC_009495.1 1748904 1750130 D major facilitator transporter 1748904..1750130 Clostridium botulinum A str. ATCC 3502 5187112 YP_001254118.1 CDS CBO1615 NC_009495.1 1750685 1751542 R HAD-superfamily hydrolase complement(1750685..1751542) Clostridium botulinum A str. ATCC 3502 5187241 YP_001254119.1 CDS CBO1616 NC_009495.1 1751554 1752303 R DeoR family transcriptional regulator complement(1751554..1752303) Clostridium botulinum A str. ATCC 3502 5187243 YP_001254120.1 CDS CBO1618 NC_009495.1 1752844 1753374 D Weak similarity to the listed RNA polymerase sigma factors; RNA polymerase sigma factor 1752844..1753374 Clostridium botulinum A str. ATCC 3502 5185873 YP_001254121.1 CDS CBO1619 NC_009495.1 1753552 1753743 D hypothetical protein 1753552..1753743 Clostridium botulinum A str. ATCC 3502 5185874 YP_001254122.1 CDS colA NC_009495.1 1753926 1757555 R collagenase complement(1753926..1757555) Clostridium botulinum A str. ATCC 3502 5187610 YP_001254123.1 CDS metF NC_009495.1 1758029 1758916 D 5,10-methylenetetrahydrofolate reductase 1758029..1758916 Clostridium botulinum A str. ATCC 3502 5185876 YP_001254124.1 CDS CBO1622 NC_009495.1 1759080 1759769 D hypothetical protein 1759080..1759769 Clostridium botulinum A str. ATCC 3502 5185877 YP_001254125.1 CDS metH NC_009495.1 1759759 1762137 D 5-methyltetrahydrofolate--homocysteine methyltransferase 1759759..1762137 Clostridium botulinum A str. ATCC 3502 5185878 YP_001254126.1 CDS CBO1624 NC_009495.1 1762384 1762803 R hypothetical protein complement(1762384..1762803) Clostridium botulinum A str. ATCC 3502 5185879 YP_001254127.1 CDS CBO1625 NC_009495.1 1763282 1763854 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 1763282..1763854 Clostridium botulinum A str. ATCC 3502 5185880 YP_001254128.1 CDS CBO1626 NC_009495.1 1763847 1765301 D hypothetical protein 1763847..1765301 Clostridium botulinum A str. ATCC 3502 5185881 YP_001254129.1 CDS CBO1627 NC_009495.1 1765534 1765641 D hypothetical protein 1765534..1765641 Clostridium botulinum A str. ATCC 3502 5185882 YP_001254130.1 CDS acoR NC_009495.1 1765651 1767603 D signal-transduction and transcriptional-control protein 1765651..1767603 Clostridium botulinum A str. ATCC 3502 5185883 YP_001254131.1 CDS CBO1629 NC_009495.1 1767772 1768143 D hypothetical protein 1767772..1768143 Clostridium botulinum A str. ATCC 3502 5185884 YP_001254132.1 CDS acoA NC_009495.1 1768164 1769147 D TPP-dependent acetoin dehydrogenase complex, E1 component subunit alpha 1768164..1769147 Clostridium botulinum A str. ATCC 3502 5185885 YP_001254133.1 CDS acoB NC_009495.1 1769150 1770121 D TPP-dependent acetoin dehydrogenase complex, E1 component subunit beta 1769150..1770121 Clostridium botulinum A str. ATCC 3502 5185886 YP_001254134.1 CDS acoX NC_009495.1 1770174 1771169 D acetoin catabolism protein X 1770174..1771169 Clostridium botulinum A str. ATCC 3502 5185887 YP_001254135.1 CDS acoC NC_009495.1 1771205 1772515 D TPP-dependent acetoin dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase 1771205..1772515 Clostridium botulinum A str. ATCC 3502 5185888 YP_001254136.1 CDS acoL NC_009495.1 1772528 1773919 D TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase 1772528..1773919 Clostridium botulinum A str. ATCC 3502 5185889 YP_001254137.1 CDS lplA2 NC_009495.1 1773944 1774939 D lipoate-protein ligase A 1773944..1774939 Clostridium botulinum A str. ATCC 3502 5185890 YP_001254138.1 CDS opuBA NC_009495.1 1775278 1776438 D glycine betaine/L-proline ABC transporter ATP-binding protein 1775278..1776438 Clostridium botulinum A str. ATCC 3502 5185891 YP_001254139.1 CDS opuBB NC_009495.1 1776428 1778014 D glycine betaine/L-proline ABC transporter permease/substrate-binding protein 1776428..1778014 Clostridium botulinum A str. ATCC 3502 5185892 YP_001254140.1 CDS thrC NC_009495.1 1778829 1780310 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1778829..1780310 Clostridium botulinum A str. ATCC 3502 5185893 YP_001254141.1 CDS thrB NC_009495.1 1780320 1781213 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 1780320..1781213 Clostridium botulinum A str. ATCC 3502 5185894 YP_001254142.1 CDS apk NC_009495.1 1781340 1782659 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive; aspartate kinase 1781340..1782659 Clostridium botulinum A str. ATCC 3502 5185895 YP_001254143.1 CDS hom NC_009495.1 1782882 1784159 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1782882..1784159 Clostridium botulinum A str. ATCC 3502 5185896 YP_001254144.1 CDS CBO1642 NC_009495.1 1784746 1786656 D signal-transduction and transcriptional-control protein 1784746..1786656 Clostridium botulinum A str. ATCC 3502 5185897 YP_001254145.1 CDS CBO1643 NC_009495.1 1787165 1788331 D NADH-dependent butanol dehydrogenase 1787165..1788331 Clostridium botulinum A str. ATCC 3502 5185898 YP_001254146.1 CDS pyrK1 NC_009495.1 1788660 1789547 D Also similar to CBO3305 (67.698 38d. in 291 aa overlap).; ferredoxin-NADP reductase 1788660..1789547 Clostridium botulinum A str. ATCC 3502 5187042 YP_001254147.1 CDS aspB NC_009495.1 1789547 1790929 D function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase 1789547..1790929 Clostridium botulinum A str. ATCC 3502 5185900 YP_001254148.1 CDS CBO1647 NC_009495.1 1793129 1793830 D pentapeptide repeat-containing protein 1793129..1793830 Clostridium botulinum A str. ATCC 3502 5185902 YP_001254149.1 CDS CBO1648 NC_009495.1 1794108 1794221 D hypothetical protein 1794108..1794221 Clostridium botulinum A str. ATCC 3502 5185903 YP_001254150.1 CDS CBO1649 NC_009495.1 1794253 1795332 D phage surface protein 1794253..1795332 Clostridium botulinum A str. ATCC 3502 5185904 YP_001254151.1 CDS CBO1650 NC_009495.1 1795426 1795644 D hypothetical protein 1795426..1795644 Clostridium botulinum A str. ATCC 3502 5185905 YP_001254152.1 CDS CBO1652 NC_009495.1 1796404 1796565 D hypothetical protein 1796404..1796565 Clostridium botulinum A str. ATCC 3502 5185907 YP_001254153.1 CDS CBO1654 NC_009495.1 1797413 1797637 D Also similar to the prophage encoded CDS, CBO1752,(91.892 38d. in 74 aa overlap).; hypothetical protein 1797413..1797637 Clostridium botulinum A str. ATCC 3502 5185909 YP_001254154.1 CDS CBO1655 NC_009495.1 1798105 1798341 D ; Similar to the prophage encoded CDS, CBO1755,(79.7 38d. in 74 aa overlap).; hypothetical protein 1798105..1798341 Clostridium botulinum A str. ATCC 3502 5185910 YP_001254155.1 CDS CBO1656 NC_009495.1 1798497 1799048 D Also similar to CBO2229 (57.84 38d); hypothetical protein 1798497..1799048 Clostridium botulinum A str. ATCC 3502 5185911 YP_001254156.1 CDS CBO1658 NC_009495.1 1799874 1800506 D hypothetical protein 1799874..1800506 Clostridium botulinum A str. ATCC 3502 5185913 YP_001254157.1 CDS CBO1659 NC_009495.1 1800539 1801093 D hypothetical protein 1800539..1801093 Clostridium botulinum A str. ATCC 3502 5185914 YP_001254158.1 CDS alr NC_009495.1 1801531 1802700 D converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 1801531..1802700 Clostridium botulinum A str. ATCC 3502 5185915 YP_001254159.1 CDS CBO1661 NC_009495.1 1803121 1804593 D methyl-accepting chemotaxis protein 1803121..1804593 Clostridium botulinum A str. ATCC 3502 5185916 YP_001254160.1 CDS CBO1662 NC_009495.1 1804720 1806021 D xanthine/uracil permease 1804720..1806021 Clostridium botulinum A str. ATCC 3502 5185917 YP_001254161.1 CDS CBO1663 NC_009495.1 1806261 1807094 D hypothetical protein 1806261..1807094 Clostridium botulinum A str. ATCC 3502 5187282 YP_001254162.1 CDS CBO1664 NC_009495.1 1807311 1808195 R oxidoreductase, short chain dehydrogenase/reductase complement(1807311..1808195) Clostridium botulinum A str. ATCC 3502 5185919 YP_001254163.1 CDS CBO1665 NC_009495.1 1808272 1808388 D hypothetical protein 1808272..1808388 Clostridium botulinum A str. ATCC 3502 5185920 YP_001254164.1 CDS CBO1666 NC_009495.1 1808671 1810677 D methyl-accepting chemotaxis protein 1808671..1810677 Clostridium botulinum A str. ATCC 3502 5185921 YP_001254165.1 CDS CBO1667 NC_009495.1 1811590 1812603 D hypothetical protein 1811590..1812603 Clostridium botulinum A str. ATCC 3502 5185922 YP_001254166.1 CDS CBO1668 NC_009495.1 1812756 1813307 R hypothetical protein complement(1812756..1813307) Clostridium botulinum A str. ATCC 3502 5185923 YP_001254167.1 CDS CBO1669 NC_009495.1 1813450 1813578 R hypothetical protein complement(1813450..1813578) Clostridium botulinum A str. ATCC 3502 5185924 YP_001254168.1 CDS CBO1670 NC_009495.1 1813667 1816900 D helicase, SNF2/RAD54 family 1813667..1816900 Clostridium botulinum A str. ATCC 3502 5185925 YP_001254169.1 CDS CBO1671 NC_009495.1 1816956 1817237 R hypothetical protein complement(1816956..1817237) Clostridium botulinum A str. ATCC 3502 5185926 YP_001254170.1 CDS CBO1672 NC_009495.1 1817477 1817608 D hypothetical protein 1817477..1817608 Clostridium botulinum A str. ATCC 3502 5185927 YP_001254171.1 CDS CBO1673 NC_009495.1 1817666 1817773 R hypothetical protein complement(1817666..1817773) Clostridium botulinum A str. ATCC 3502 5185928 YP_001254172.1 CDS CBO1674 NC_009495.1 1817838 1818362 D dehydrogenase 1817838..1818362 Clostridium botulinum A str. ATCC 3502 5185929 YP_001254173.1 CDS CBO1675 NC_009495.1 1818499 1820094 D oligopeptide-binding protein 1818499..1820094 Clostridium botulinum A str. ATCC 3502 5185930 YP_001254174.1 CDS CBO1676 NC_009495.1 1820108 1821082 D oligopeptide transport system permease 1820108..1821082 Clostridium botulinum A str. ATCC 3502 5185931 YP_001254175.1 CDS CBO1677 NC_009495.1 1821086 1821907 D oligopeptide transport system, permease 1821086..1821907 Clostridium botulinum A str. ATCC 3502 5185932 YP_001254176.1 CDS CBO1678 NC_009495.1 1821938 1822738 D oligopeptide transport system, ATP-binding protein 1821938..1822738 Clostridium botulinum A str. ATCC 3502 5185933 YP_001254177.1 CDS CBO1679 NC_009495.1 1822764 1823813 R phage integrase complement(1822764..1823813) Clostridium botulinum A str. ATCC 3502 5185934 YP_001254178.1 CDS CBO1679A NC_009495.1 1823800 1824036 R phage regulatory protein complement(1823800..1824036) Clostridium botulinum A str. ATCC 3502 5204271 YP_001254179.1 CDS CBO1680 NC_009495.1 1824208 1824567 R phage transcriptional regulator complement(1824208..1824567) Clostridium botulinum A str. ATCC 3502 5185935 YP_001254180.1 CDS CBO1681 NC_009495.1 1824570 1824677 R Similar to the C-terminal region of Frog adenovirus 1 33k protein SWALL:Q9IIH1 (EMBL:AF224336) (129 aa) fasta scores: E(): 6.5, 42.85 38d in 28 aa; hypothetical protein complement(1824570..1824677) Clostridium botulinum A str. ATCC 3502 5185936 YP_001254181.1 CDS CBO1682 NC_009495.1 1825016 1825216 D Similar to N-terminal region of Bacteriophage 434 repressor protein CI cI SWALL:RPC1_BP434 (SWALL:P16117) (94 aa) fasta scores: E(): 1.2, 30.35 38d in 56 aa, and to Listeria monocytogenes LcmR protein lcmR SWALL:Q9EUV6 (EMBL:AJ302030) (68 aa) fasta scores: E(): 1.5, 33.33 38d in 54 aa; phage repressor protein 1825016..1825216 Clostridium botulinum A str. ATCC 3502 5185937 YP_001254182.1 CDS CBO1683 NC_009495.1 1825217 1825915 D antirepressor 1825217..1825915 Clostridium botulinum A str. ATCC 3502 5185938 YP_001254183.1 CDS CBO1684 NC_009495.1 1825917 1826084 D phage protein 1825917..1826084 Clostridium botulinum A str. ATCC 3502 5185939 YP_001254184.1 CDS CBO1685 NC_009495.1 1826097 1826450 D phage protein 1826097..1826450 Clostridium botulinum A str. ATCC 3502 5185940 YP_001254185.1 CDS CBO1686 NC_009495.1 1826547 1826861 D phage protein 1826547..1826861 Clostridium botulinum A str. ATCC 3502 5185941 YP_001254186.1 CDS CBO1687 NC_009495.1 1827051 1827362 D phage protein 1827051..1827362 Clostridium botulinum A str. ATCC 3502 5185942 YP_001254187.1 CDS CBO1688 NC_009495.1 1827362 1827580 D phage protein 1827362..1827580 Clostridium botulinum A str. ATCC 3502 5187407 YP_001254188.1 CDS CBO1689 NC_009495.1 1827582 1827716 D phage protein 1827582..1827716 Clostridium botulinum A str. ATCC 3502 5187265 YP_001254189.1 CDS CBO1690 NC_009495.1 1827713 1828210 D phage protein 1827713..1828210 Clostridium botulinum A str. ATCC 3502 5185945 YP_001254190.1 CDS erF NC_009495.1 1828210 1828758 D essential recombination function protein 1828210..1828758 Clostridium botulinum A str. ATCC 3502 5185946 YP_001254191.1 CDS CBO1692 NC_009495.1 1828760 1829044 D phage protein 1828760..1829044 Clostridium botulinum A str. ATCC 3502 5185947 YP_001254192.1 CDS CBO1693 NC_009495.1 1829055 1829948 D phage protein 1829055..1829948 Clostridium botulinum A str. ATCC 3502 5185948 YP_001254193.1 CDS CBO1694 NC_009495.1 1829878 1830645 D phage protein 1829878..1830645 Clostridium botulinum A str. ATCC 3502 5185949 YP_001254194.1 CDS CBO1695 NC_009495.1 1830638 1830853 D phage protein 1830638..1830853 Clostridium botulinum A str. ATCC 3502 5185950 YP_001254195.1 CDS CBO1696 NC_009495.1 1830866 1831168 D phage protein 1830866..1831168 Clostridium botulinum A str. ATCC 3502 5185951 YP_001254196.1 CDS CBO1697 NC_009495.1 1831234 1831953 D phage protein 1831234..1831953 Clostridium botulinum A str. ATCC 3502 5185952 YP_001254197.1 CDS CBO1698 NC_009495.1 1831995 1832417 D DNA N-6-adenine-methyltransferase of bacteriophage 1831995..1832417 Clostridium botulinum A str. ATCC 3502 5185953 YP_001254198.1 CDS CBO1699 NC_009495.1 1832484 1832645 D phage protein 1832484..1832645 Clostridium botulinum A str. ATCC 3502 5185954 YP_001254199.1 CDS CBO1700 NC_009495.1 1832701 1832973 D phage protein 1832701..1832973 Clostridium botulinum A str. ATCC 3502 5185955 YP_001254200.1 CDS CBO1701 NC_009495.1 1833005 1833322 D phage protein 1833005..1833322 Clostridium botulinum A str. ATCC 3502 5185956 YP_001254201.1 CDS CBO1702 NC_009495.1 1833352 1833504 D phage protein 1833352..1833504 Clostridium botulinum A str. ATCC 3502 5185957 YP_001254202.1 CDS CBO1703 NC_009495.1 1833572 1833754 D phage protein 1833572..1833754 Clostridium botulinum A str. ATCC 3502 5185958 YP_001254203.1 CDS CBO1704 NC_009495.1 1833776 1834054 D phage protein 1833776..1834054 Clostridium botulinum A str. ATCC 3502 5185959 YP_001254204.1 CDS CBO1705 NC_009495.1 1834119 1834430 D phage protein 1834119..1834430 Clostridium botulinum A str. ATCC 3502 5185960 YP_001254205.1 CDS CBO1706 NC_009495.1 1834484 1834648 D phage protein 1834484..1834648 Clostridium botulinum A str. ATCC 3502 5185961 YP_001254206.1 CDS CBO1707 NC_009495.1 1834665 1834937 D phage protein 1834665..1834937 Clostridium botulinum A str. ATCC 3502 5185962 YP_001254207.1 CDS CBO1708 NC_009495.1 1834996 1835205 D phage protein 1834996..1835205 Clostridium botulinum A str. ATCC 3502 5185963 YP_001254208.1 CDS CBO1709 NC_009495.1 1835304 1835678 D phage protein 1835304..1835678 Clostridium botulinum A str. ATCC 3502 5185964 YP_001254209.1 CDS CBO1710 NC_009495.1 1835853 1836254 D phage protein 1835853..1836254 Clostridium botulinum A str. ATCC 3502 5185965 YP_001254210.1 CDS CBO1711 NC_009495.1 1836254 1836679 D phage protein 1836254..1836679 Clostridium botulinum A str. ATCC 3502 5185966 YP_001254211.1 CDS CBO1712 NC_009495.1 1836682 1837008 D phage protein 1836682..1837008 Clostridium botulinum A str. ATCC 3502 5185967 YP_001254212.1 CDS CBO1712A NC_009495.1 1837019 1837156 D phage protein 1837019..1837156 Clostridium botulinum A str. ATCC 3502 5204272 YP_001254213.1 CDS CBO1713 NC_009495.1 1837158 1837316 D phage protein 1837158..1837316 Clostridium botulinum A str. ATCC 3502 5185968 YP_001254214.1 CDS CBO1714 NC_009495.1 1837402 1837848 D phage protein 1837402..1837848 Clostridium botulinum A str. ATCC 3502 5185969 YP_001254215.1 CDS CBO1715 NC_009495.1 1837952 1838107 D phage protein 1837952..1838107 Clostridium botulinum A str. ATCC 3502 5185970 YP_001254216.1 CDS CBO1716 NC_009495.1 1838107 1838727 D phage protein 1838107..1838727 Clostridium botulinum A str. ATCC 3502 5185971 YP_001254217.1 CDS CBO1717 NC_009495.1 1838720 1839235 D phage protein 1838720..1839235 Clostridium botulinum A str. ATCC 3502 5185972 YP_001254218.1 CDS CBO1718 NC_009495.1 1839379 1839531 D phage protein 1839379..1839531 Clostridium botulinum A str. ATCC 3502 5185973 YP_001254219.1 CDS CBO1719 NC_009495.1 1839802 1839942 D phage protein 1839802..1839942 Clostridium botulinum A str. ATCC 3502 5185974 YP_001254220.1 CDS CBO1720 NC_009495.1 1840111 1840383 D phage protein 1840111..1840383 Clostridium botulinum A str. ATCC 3502 5185975 YP_001254221.1 CDS CBO1721 NC_009495.1 1840424 1840858 D terminase small subunit 1840424..1840858 Clostridium botulinum A str. ATCC 3502 5185976 YP_001254222.1 CDS CBO1722 NC_009495.1 1840851 1842110 D terminase large subunit 1840851..1842110 Clostridium botulinum A str. ATCC 3502 5185977 YP_001254223.1 CDS CBO1723 NC_009495.1 1842124 1843566 D portal protein 1842124..1843566 Clostridium botulinum A str. ATCC 3502 5185978 YP_001254224.1 CDS CBO1724 NC_009495.1 1843547 1844578 D prophage head protein 1843547..1844578 Clostridium botulinum A str. ATCC 3502 5185979 YP_001254225.1 CDS CBO1725 NC_009495.1 1844601 1844894 D Similar to N-terminal region of Bacillus cereus phage protein bc1880 SWALL:Q81ET4 (EMBL:AE017003) (313 aa) fasta scores: E(): 0.07, 31.95 38d in 97 aa; phage protein 1844601..1844894 Clostridium botulinum A str. ATCC 3502 5185980 YP_001254226.1 CDS CBO1726 NC_009495.1 1844905 1845147 D phage protein 1844905..1845147 Clostridium botulinum A str. ATCC 3502 5185981 YP_001254227.1 CDS CBO1727 NC_009495.1 1845264 1845863 D scaffold protein 1845264..1845863 Clostridium botulinum A str. ATCC 3502 5185982 YP_001254228.1 CDS CBO1728 NC_009495.1 1845883 1846848 D coat protein 1845883..1846848 Clostridium botulinum A str. ATCC 3502 5185983 YP_001254229.1 CDS CBO1729 NC_009495.1 1846862 1847206 D phage protein 1846862..1847206 Clostridium botulinum A str. ATCC 3502 5185984 YP_001254230.1 CDS CBO1730 NC_009495.1 1847208 1847591 D phage protein 1847208..1847591 Clostridium botulinum A str. ATCC 3502 5185985 YP_001254231.1 CDS CBO1731 NC_009495.1 1847591 1848082 D phage protein 1847591..1848082 Clostridium botulinum A str. ATCC 3502 5185986 YP_001254232.1 CDS CBO1732 NC_009495.1 1848069 1848527 D phage protein 1848069..1848527 Clostridium botulinum A str. ATCC 3502 5185987 YP_001254233.1 CDS CBO1733 NC_009495.1 1848689 1849999 D phage protein 1848689..1849999 Clostridium botulinum A str. ATCC 3502 5185988 YP_001254234.1 CDS CBO1734 NC_009495.1 1850003 1850467 D phage protein 1850003..1850467 Clostridium botulinum A str. ATCC 3502 5185989 YP_001254235.1 CDS CBO1735 NC_009495.1 1850484 1850897 D phage protein 1850484..1850897 Clostridium botulinum A str. ATCC 3502 5185990 YP_001254236.1 CDS CBO1736 NC_009495.1 1851138 1851716 D phage lipoprotein 1851138..1851716 Clostridium botulinum A str. ATCC 3502 5185991 YP_001254237.1 CDS CBO1737 NC_009495.1 1851804 1853966 D phage protein 1851804..1853966 Clostridium botulinum A str. ATCC 3502 5185992 YP_001254238.1 CDS CBO1738 NC_009495.1 1853966 1854643 D phage protein 1853966..1854643 Clostridium botulinum A str. ATCC 3502 5185993 YP_001254239.1 CDS CBO1739 NC_009495.1 1854655 1855629 D phage protein 1854655..1855629 Clostridium botulinum A str. ATCC 3502 5185994 YP_001254240.1 CDS CBO1740 NC_009495.1 1855639 1855989 D phage protein 1855639..1855989 Clostridium botulinum A str. ATCC 3502 5185995 YP_001254241.1 CDS CBO1741 NC_009495.1 1855986 1856393 D phage protein 1855986..1856393 Clostridium botulinum A str. ATCC 3502 5185996 YP_001254242.1 CDS CBO1742 NC_009495.1 1856394 1857488 D phage tail protein 1856394..1857488 Clostridium botulinum A str. ATCC 3502 5185997 YP_001254243.1 CDS CBO1743 NC_009495.1 1857469 1858095 D phage protein 1857469..1858095 Clostridium botulinum A str. ATCC 3502 5185998 YP_001254244.1 CDS CBO1744 NC_009495.1 1858099 1859793 D phage tail fiber protein 1858099..1859793 Clostridium botulinum A str. ATCC 3502 5185999 YP_001254245.1 CDS CBO1745 NC_009495.1 1859826 1860218 D phage protein 1859826..1860218 Clostridium botulinum A str. ATCC 3502 5186000 YP_001254246.1 CDS CBO1746 NC_009495.1 1860211 1860333 D phage protein 1860211..1860333 Clostridium botulinum A str. ATCC 3502 5186001 YP_001254247.1 CDS CBO1747 NC_009495.1 1860729 1860923 D Similar to C-terminal region of Chromobacterium violaceum probable rhs family protein cv1429 SWALL:AAQ59104 (EMBL:AE016914) (409 aa) fasta scores: E(): 0.069, 38.71 38d in 62 aa; Highly similar to CBO1421 (95.3 38d); phage protein 1860729..1860923 Clostridium botulinum A str. ATCC 3502 5186002 YP_001254248.1 CDS CBO1748 NC_009495.1 1861117 1861965 D phage protein 1861117..1861965 Clostridium botulinum A str. ATCC 3502 5186003 YP_001254249.1 CDS CBO1749 NC_009495.1 1861988 1862212 D phage protein 1861988..1862212 Clostridium botulinum A str. ATCC 3502 5186004 YP_001254250.1 CDS CBO1750 NC_009495.1 1862226 1862420 D phage exported protein 1862226..1862420 Clostridium botulinum A str. ATCC 3502 5186005 YP_001254251.1 CDS CBO1751 NC_009495.1 1862461 1863222 D Also similar to CBO1653 (81.6 38d), CBO2325 (86.1 id.), CBO3016 (50.0 38d.); bacteriophage endolysin (N-acetylmuramoyl-L-alanine amidase) 1862461..1863222 Clostridium botulinum A str. ATCC 3502 5186006 YP_001254252.1 CDS CBO1752 NC_009495.1 1863409 1863630 D .; Also similar to CBO1654 (91.892 38d. in 74 aa overlap) and to CBO1651 (39.39 38d); phage protein 1863409..1863630 Clostridium botulinum A str. ATCC 3502 5186007 YP_001254253.1 CDS CBO1753A NC_009495.1 1863925 1864065 D phage protein 1863925..1864065 Clostridium botulinum A str. ATCC 3502 5204273 YP_001254254.1 CDS CBO1753B NC_009495.1 1864101 1864253 D phage protein 1864101..1864253 Clostridium botulinum A str. ATCC 3502 5204274 YP_001254255.1 CDS CBO1754 NC_009495.1 1864240 1864422 D phage protein 1864240..1864422 Clostridium botulinum A str. ATCC 3502 5186009 YP_001254256.1 CDS CBO1755 NC_009495.1 1864433 1864678 D .; Similar to CBO1655 (79.7 38d. in 74 aa overlap).; phage protein 1864433..1864678 Clostridium botulinum A str. ATCC 3502 5186010 YP_001254257.1 CDS CBO1756 NC_009495.1 1864976 1865794 D oligopeptide ABC transporterATP-binding protein 1864976..1865794 Clostridium botulinum A str. ATCC 3502 5186011 YP_001254258.1 CDS CBO1757 NC_009495.1 1866035 1866622 R DNA polymerase III subunit epsilon complement(1866035..1866622) Clostridium botulinum A str. ATCC 3502 5186012 YP_001254259.1 CDS CBO1758 NC_009495.1 1866917 1867867 D hypothetical protein 1866917..1867867 Clostridium botulinum A str. ATCC 3502 5186013 YP_001254260.1 CDS CBO1759 NC_009495.1 1868139 1868774 D UbiE/COQ5 family methyltransferase 1868139..1868774 Clostridium botulinum A str. ATCC 3502 5186014 YP_001254261.1 CDS CBO1760 NC_009495.1 1868922 1869362 R heat shock protein complement(1868922..1869362) Clostridium botulinum A str. ATCC 3502 5186015 YP_001254262.1 CDS CBO1761 NC_009495.1 1869713 1870897 D major facilitator transporter 1869713..1870897 Clostridium botulinum A str. ATCC 3502 5186016 YP_001254263.1 CDS CBO1762 NC_009495.1 1871048 1871611 D TetR family transcriptional regulator 1871048..1871611 Clostridium botulinum A str. ATCC 3502 5186017 YP_001254264.1 CDS fpk NC_009495.1 1871811 1872716 D This CDS is also similar to CBO1992 (35.644 identity in 303 aa overlap).; fructose-1-phosphate kinase 1871811..1872716 Clostridium botulinum A str. ATCC 3502 5186018 YP_001254265.1 CDS CBO1764 NC_009495.1 1872833 1874212 R amino acid/peptide transporter complement(1872833..1874212) Clostridium botulinum A str. ATCC 3502 5186019 YP_001254266.1 CDS CBO1765 NC_009495.1 1874807 1874962 D hypothetical protein 1874807..1874962 Clostridium botulinum A str. ATCC 3502 5186020 YP_001254267.1 CDS CBO1766 NC_009495.1 1875114 1876088 D hypothetical protein 1875114..1876088 Clostridium botulinum A str. ATCC 3502 5186021 YP_001254268.1 CDS CBO1767 NC_009495.1 1876199 1876750 R hypothetical protein complement(1876199..1876750) Clostridium botulinum A str. ATCC 3502 5186022 YP_001254269.1 CDS CBO1768 NC_009495.1 1876995 1877150 D hypothetical protein 1876995..1877150 Clostridium botulinum A str. ATCC 3502 5186023 YP_001254270.1 CDS CBO1769 NC_009495.1 1877187 1878146 D kinase, PfkB family 1877187..1878146 Clostridium botulinum A str. ATCC 3502 5186024 YP_001254271.1 CDS CBO1770 NC_009495.1 1878291 1878926 R spore coat assembly protein SafA complement(1878291..1878926) Clostridium botulinum A str. ATCC 3502 5186025 YP_001254272.1 CDS CBO1771 NC_009495.1 1879328 1879765 R hypothetical protein complement(1879328..1879765) Clostridium botulinum A str. ATCC 3502 5186026 YP_001254273.1 CDS cspC NC_009495.1 1880094 1880303 D Also similar to CBO0282 (49.18 38d.) and CBO1387 (50.7 38d.).; cold shock protein 1880094..1880303 Clostridium botulinum A str. ATCC 3502 5186027 YP_001254274.1 CDS CBO1773 NC_009495.1 1880679 1882682 D methyl-accepting chemotaxis protein 1880679..1882682 Clostridium botulinum A str. ATCC 3502 5186028 YP_001254275.1 CDS CBO1774 NC_009495.1 1882963 1884543 R drug resistance ABC transporter ATP-binding protein complement(1882963..1884543) Clostridium botulinum A str. ATCC 3502 5186029 YP_001254276.1 CDS CBO1775 NC_009495.1 1884882 1885340 D prolyl-tRNA synthetase 1884882..1885340 Clostridium botulinum A str. ATCC 3502 5186030 YP_001254277.1 CDS asrC NC_009495.1 1885911 1886765 D sulfite/nitrite reductase 1885911..1886765 Clostridium botulinum A str. ATCC 3502 5186031 YP_001254278.1 CDS cheV NC_009495.1 1886905 1887798 R chemotaxis protein CheV complement(1886905..1887798) Clostridium botulinum A str. ATCC 3502 5186032 YP_001254279.1 CDS rhlE NC_009495.1 1888167 1889432 D ATP-dependent RNA helicase, DEAD/DEAH box family 1888167..1889432 Clostridium botulinum A str. ATCC 3502 5186033 YP_001254280.1 CDS CBO1779 NC_009495.1 1889755 1890591 D RNA-binding protein 1889755..1890591 Clostridium botulinum A str. ATCC 3502 5186034 YP_001254281.1 CDS csdA NC_009495.1 1890770 1892215 D ATP-dependent RNA helicase DeaD 1890770..1892215 Clostridium botulinum A str. ATCC 3502 5186035 YP_001254282.1 CDS CBO1781 NC_009495.1 1892369 1896826 D hypothetical protein 1892369..1896826 Clostridium botulinum A str. ATCC 3502 5186036 YP_001254283.1 CDS CBO1782 NC_009495.1 1897225 1901304 D Partially similar to Listeria monocytogenes internalin a precursor inla or lmo0433 SWALL:INLA_LISMO (SWALL:P25146) (800 aa) fasta scores: E(): 5.4e-17, 29.05 id in 537 aa; hypothetical protein 1897225..1901304 Clostridium botulinum A str. ATCC 3502 5186037 YP_001254284.1 CDS CBO1783 NC_009495.1 1901710 1902639 D mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase domain protein 1901710..1902639 Clostridium botulinum A str. ATCC 3502 5186038 YP_001254285.1 CDS ftnA NC_009495.1 1902765 1903280 R ferritin complement(1902765..1903280) Clostridium botulinum A str. ATCC 3502 5186039 YP_001254286.1 CDS CBO1785 NC_009495.1 1903442 1903624 D hypothetical protein 1903442..1903624 Clostridium botulinum A str. ATCC 3502 5186040 YP_001254287.1 CDS CBO1786 NC_009495.1 1903685 1904539 D chemotaxis sensory transduction protein 1903685..1904539 Clostridium botulinum A str. ATCC 3502 5186041 YP_001254288.1 CDS cheX NC_009495.1 1904539 1905000 D chemotaxis protein CheX 1904539..1905000 Clostridium botulinum A str. ATCC 3502 5187342 YP_001254289.1 CDS CBO1788 NC_009495.1 1905183 1906541 R hypothetical protein complement(1905183..1906541) Clostridium botulinum A str. ATCC 3502 5186043 YP_001254290.1 CDS CBO1789 NC_009495.1 1907279 1907482 D small, acid-soluble spore protein alpha 1907279..1907482 Clostridium botulinum A str. ATCC 3502 5186044 YP_001254291.1 CDS CBO1790 NC_009495.1 1907543 1907743 D small, acid-soluble spore protein beta 1907543..1907743 Clostridium botulinum A str. ATCC 3502 5186045 YP_001254292.1 CDS CBO1792 NC_009495.1 1908795 1909007 R hypothetical protein complement(1908795..1909007) Clostridium botulinum A str. ATCC 3502 5186047 YP_001254293.1 CDS xerC NC_009495.1 1909194 1910174 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 1909194..1910174 Clostridium botulinum A str. ATCC 3502 5186048 YP_001254294.1 CDS CBO1794 NC_009495.1 1910497 1910859 R hypothetical protein complement(1910497..1910859) Clostridium botulinum A str. ATCC 3502 5186049 YP_001254295.1 CDS dinR NC_009495.1 1911268 1911873 D Represses a number of genes involved in the response to DNA damage; LexA repressor 1911268..1911873 Clostridium botulinum A str. ATCC 3502 5186050 YP_001254296.1 CDS CBO1796 NC_009495.1 1912070 1913353 R aluminum resistance protein complement(1912070..1913353) Clostridium botulinum A str. ATCC 3502 5186051 YP_001254297.1 CDS hfQ NC_009495.1 1913454 1913711 R RNA chaperone Hfq complement(1913454..1913711) Clostridium botulinum A str. ATCC 3502 5186052 YP_001254298.1 CDS miaA NC_009495.1 1913797 1914732 R IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase complement(1913797..1914732) Clostridium botulinum A str. ATCC 3502 5186142 YP_001254299.1 CDS mutL NC_009495.1 1914748 1916517 R This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein complement(1914748..1916517) Clostridium botulinum A str. ATCC 3502 5186054 YP_001254300.1 CDS mutS NC_009495.1 1916663 1919461 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(1916663..1919461) Clostridium botulinum A str. ATCC 3502 5186055 YP_001254301.1 CDS CBO1801 NC_009495.1 1919541 1920893 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(1919541..1920893) Clostridium botulinum A str. ATCC 3502 5186056 YP_001254302.1 CDS CBO1802 NC_009495.1 1921365 1922555 D aminotransferase, classes I and II 1921365..1922555 Clostridium botulinum A str. ATCC 3502 5186057 YP_001254303.1 CDS CBO1803 NC_009495.1 1922640 1922801 D hypothetical protein 1922640..1922801 Clostridium botulinum A str. ATCC 3502 5186058 YP_001254304.1 CDS aspC NC_009495.1 1922856 1924046 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1922856..1924046 Clostridium botulinum A str. ATCC 3502 5186059 YP_001254305.1 CDS CBO1805 NC_009495.1 1924077 1924943 R GNAT family acetyltransferase complement(1924077..1924943) Clostridium botulinum A str. ATCC 3502 5186060 YP_001254306.1 CDS cotS NC_009495.1 1925025 1926083 R spore coat protein complement(1925025..1926083) Clostridium botulinum A str. ATCC 3502 5186061 YP_001254307.1 CDS CBO1807 NC_009495.1 1926331 1928247 R these proteins appear to have resulted from a fusion of lytB and rpsA; catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(1926331..1928247) Clostridium botulinum A str. ATCC 3502 5186062 YP_001254308.1 CDS cmk NC_009495.1 1928311 1928964 R Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase complement(1928311..1928964) Clostridium botulinum A str. ATCC 3502 5186063 YP_001254309.1 CDS aroH NC_009495.1 1929040 1929411 R chorismate mutase complement(1929040..1929411) Clostridium botulinum A str. ATCC 3502 5186064 YP_001254310.1 CDS CBO1810 NC_009495.1 1929411 1930634 R pyridine nucleotide-disulfide oxidoreductase complement(1929411..1930634) Clostridium botulinum A str. ATCC 3502 5186065 YP_001254311.1 CDS gluD NC_009495.1 1930929 1932194 R glutamate dehydrogenase complement(1930929..1932194) Clostridium botulinum A str. ATCC 3502 5186066 YP_001254312.1 CDS CBO1812 NC_009495.1 1932429 1933313 R transcriptional regulator complement(1932429..1933313) Clostridium botulinum A str. ATCC 3502 5186067 YP_001254313.1 CDS rluB NC_009495.1 1933681 1934391 R ribosomal large subunit pseudouridine synthase B complement(1933681..1934391) Clostridium botulinum A str. ATCC 3502 5186068 YP_001254314.1 CDS CBO1814 NC_009495.1 1934854 1936143 R hypothetical protein complement(1934854..1936143) Clostridium botulinum A str. ATCC 3502 5186069 YP_001254315.1 CDS CBO1815 NC_009495.1 1936241 1937521 R hypothetical protein complement(1936241..1937521) Clostridium botulinum A str. ATCC 3502 5186070 YP_001254316.1 CDS CBO1816 NC_009495.1 1937816 1939219 R glycosyltransferase complement(1937816..1939219) Clostridium botulinum A str. ATCC 3502 5186071 YP_001254317.1 CDS CBO1817 NC_009495.1 1939580 1939780 D hypothetical protein 1939580..1939780 Clostridium botulinum A str. ATCC 3502 5186072 YP_001254318.1 CDS CBO1818 NC_009495.1 1940153 1942174 D methyl-accepting chemotaxis protein 1940153..1942174 Clostridium botulinum A str. ATCC 3502 5186073 YP_001254319.1 CDS ccdA2 NC_009495.1 1942218 1942904 R cytochrome c-type biogenesis protein complement(1942218..1942904) Clostridium botulinum A str. ATCC 3502 5186074 YP_001254320.1 CDS CBO1820 NC_009495.1 1942906 1943337 R thioredoxin family protein complement(1942906..1943337) Clostridium botulinum A str. ATCC 3502 5186075 YP_001254321.1 CDS CBO1821 NC_009495.1 1943452 1944288 R hydrolase, carbon-nitrogen family complement(1943452..1944288) Clostridium botulinum A str. ATCC 3502 5186076 YP_001254322.1 CDS CBO1822 NC_009495.1 1944419 1944973 R hypothetical protein complement(1944419..1944973) Clostridium botulinum A str. ATCC 3502 5186077 YP_001254323.1 CDS CBO1823 NC_009495.1 1945090 1945212 D hypothetical protein 1945090..1945212 Clostridium botulinum A str. ATCC 3502 5186078 YP_001254324.1 CDS CBO1824 NC_009495.1 1945385 1946818 D transporter monovalent cation:proton antiporter-2 (CPA2) family 1945385..1946818 Clostridium botulinum A str. ATCC 3502 5186079 YP_001254325.1 CDS CBO1825 NC_009495.1 1946943 1947287 R 4-carboxymuconolactone decarboxylase complement(1946943..1947287) Clostridium botulinum A str. ATCC 3502 5186080 YP_001254326.1 CDS CBO1826 NC_009495.1 1947425 1947940 R GNAT family acetyltransferase complement(1947425..1947940) Clostridium botulinum A str. ATCC 3502 5186081 YP_001254327.1 CDS CBO1827 NC_009495.1 1948125 1948619 R lipoprotein complement(1948125..1948619) Clostridium botulinum A str. ATCC 3502 5186082 YP_001254328.1 CDS CBO1828 NC_009495.1 1948851 1949162 R hypothetical protein complement(1948851..1949162) Clostridium botulinum A str. ATCC 3502 5186083 YP_001254329.1 CDS CBO1828A NC_009495.1 1949143 1949376 R hypothetical protein complement(1949143..1949376) Clostridium botulinum A str. ATCC 3502 5204275 YP_001254330.1 CDS CBO1829 NC_009495.1 1949510 1949752 D Similar to the C-terminal region of several oxidoreductases such as Eubacterium acidaminophilum HymA protein.; hypothetical protein 1949510..1949752 Clostridium botulinum A str. ATCC 3502 5186084 YP_001254331.1 CDS CBO1830 NC_009495.1 1949755 1951479 D This CDS is also similar to CBO1832 (49.914 38d. in 579 aa overlap); hydrogenase 1949755..1951479 Clostridium botulinum A str. ATCC 3502 5186085 YP_001254332.1 CDS CBO1831 NC_009495.1 1951476 1952645 D Similar to the C-terminal region of stage II sporulation protein E from various organisms including Bacillus subtilis stage II sporulation protein eE SpoIIE or spoiih or bsu00640 SWALL:SP2E_BACSU (SWALL:P37475) (827 aa) fasta scores: E(): 0.0013, 27.01 38d in 211 aa; sporulation domain protein 1951476..1952645 Clostridium botulinum A str. ATCC 3502 5186086 YP_001254333.1 CDS CBO1832 NC_009495.1 1952780 1954519 D This CDS is also similar to CBO1830 (49.914 38d. in 579 aa overlap); hydrogenase 1952780..1954519 Clostridium botulinum A str. ATCC 3502 5186087 YP_001254334.1 CDS hypE NC_009495.1 1954872 1955876 R hydrogenase expression/formation protein HypE complement(1954872..1955876) Clostridium botulinum A str. ATCC 3502 5186088 YP_001254335.1 CDS hypD NC_009495.1 1956044 1957117 R hydrogenase expression/formation protein HypD complement(1956044..1957117) Clostridium botulinum A str. ATCC 3502 5186089 YP_001254336.1 CDS hydA NC_009495.1 1957300 1959738 R [NiFe] hydrogenase maturation protein HypF complement(1957300..1959738) Clostridium botulinum A str. ATCC 3502 5186090 YP_001254337.1 CDS hypQ4 NC_009495.1 1959745 1960002 R hypothetical protein complement(1959745..1960002) Clostridium botulinum A str. ATCC 3502 5186091 YP_001254338.1 CDS CBO1837 NC_009495.1 1959999 1960109 R hypothetical protein complement(1959999..1960109) Clostridium botulinum A str. ATCC 3502 5186092 YP_001254339.1 CDS hypQ3 NC_009495.1 1960236 1960751 R heme/steroid binding domain-containing protein complement(1960236..1960751) Clostridium botulinum A str. ATCC 3502 5186093 YP_001254340.1 CDS hupD NC_009495.1 1960911 1961327 R hydrogenase maturation protease complement(1960911..1961327) Clostridium botulinum A str. ATCC 3502 5186094 YP_001254341.1 CDS hupL NC_009495.1 1961360 1962775 R [Ni/Fe] hydrogenase, large subunit complement(1961360..1962775) Clostridium botulinum A str. ATCC 3502 5186095 YP_001254342.1 CDS hupS NC_009495.1 1962877 1963749 R [Ni/Fe] hydrogenase, small subunit complement(1962877..1963749) Clostridium botulinum A str. ATCC 3502 5186096 YP_001254343.1 CDS CBO1842 NC_009495.1 1964017 1964718 D TraX family protein 1964017..1964718 Clostridium botulinum A str. ATCC 3502 5186097 YP_001254344.1 CDS CBO1843 NC_009495.1 1964880 1965167 R hypothetical protein complement(1964880..1965167) Clostridium botulinum A str. ATCC 3502 5186098 YP_001254345.1 CDS CBO1844 NC_009495.1 1965696 1965869 D .; Highly similar to the adjacent CDS, CBO1845 (96.49 id); hypothetical protein 1965696..1965869 Clostridium botulinum A str. ATCC 3502 5186099 YP_001254346.1 CDS CBO1845 NC_009495.1 1966754 1966927 D .; Highly similar to the adjacent CDS, CBO1844 (96.49 id); hypothetical protein 1966754..1966927 Clostridium botulinum A str. ATCC 3502 5186100 YP_001254347.1 CDS CBO1846 NC_009495.1 1967536 1969092 R ABC transporter ATP-binding protein complement(1967536..1969092) Clostridium botulinum A str. ATCC 3502 5186101 YP_001254348.1 CDS hymC NC_009495.1 1969454 1971187 R [Fe] hydrogenase complement(1969454..1971187) Clostridium botulinum A str. ATCC 3502 5186102 YP_001254349.1 CDS hymB NC_009495.1 1971207 1973102 R [Fe] hydrogenase, electron-transfer subunit complement(1971207..1973102) Clostridium botulinum A str. ATCC 3502 5186103 YP_001254350.1 CDS hymA NC_009495.1 1973114 1973593 R Fe] hydrogenase, electron-transfer subunit complement(1973114..1973593) Clostridium botulinum A str. ATCC 3502 5186104 YP_001254351.1 CDS CBO1850 NC_009495.1 1974069 1975256 R transporter monovalent cation:proton antiporter-2 (CPA2) family complement(1974069..1975256) Clostridium botulinum A str. ATCC 3502 5186105 YP_001254352.1 CDS CBO1851 NC_009495.1 1975515 1976393 R ADP-ribosylglycohydrolase complement(1975515..1976393) Clostridium botulinum A str. ATCC 3502 5186106 YP_001254353.1 CDS CBO1852 NC_009495.1 1976634 1977728 D hypothetical protein 1976634..1977728 Clostridium botulinum A str. ATCC 3502 5186107 YP_001254354.1 CDS dacB NC_009495.1 1977838 1978974 R D-alanyl-D-alanine carboxypeptidase complement(1977838..1978974) Clostridium botulinum A str. ATCC 3502 5186108 YP_001254355.1 CDS CBO1854 NC_009495.1 1979158 1979670 D hypothetical protein 1979158..1979670 Clostridium botulinum A str. ATCC 3502 5186109 YP_001254356.1 CDS CBO1855 NC_009495.1 1979738 1980178 D sporulation protein YtfJ 1979738..1980178 Clostridium botulinum A str. ATCC 3502 5186110 YP_001254357.1 CDS scpB NC_009495.1 1980239 1980820 R functions during chromosome segregation; may form a condensin-like structure with SMC and ScpA; forms a homodimer; segregation and condensation protein B complement(1980239..1980820) Clostridium botulinum A str. ATCC 3502 5186111 YP_001254358.1 CDS scpA NC_009495.1 1980813 1981559 R functions during chromosome segregation; may form a condensin-like structure with SMC and ScpB; segregation and condensation protein A complement(1980813..1981559) Clostridium botulinum A str. ATCC 3502 5186112 YP_001254359.1 CDS CBO1858 NC_009495.1 1981534 1982124 R hypothetical protein complement(1981534..1982124) Clostridium botulinum A str. ATCC 3502 5186113 YP_001254360.1 CDS dacF NC_009495.1 1982337 1983560 R D-alanyl-D-alanine carboxypeptidase complement(1982337..1983560) Clostridium botulinum A str. ATCC 3502 5186114 YP_001254361.1 CDS ecsC NC_009495.1 1983683 1984405 R hypothetical protein complement(1983683..1984405) Clostridium botulinum A str. ATCC 3502 5186115 YP_001254362.1 CDS CBO1861 NC_009495.1 1984564 1985622 R endonuclease/exonuclease/phosphatase complement(1984564..1985622) Clostridium botulinum A str. ATCC 3502 5186116 YP_001254363.1 CDS CBO1862 NC_009495.1 1985764 1986012 R hypothetical protein complement(1985764..1986012) Clostridium botulinum A str. ATCC 3502 5186117 YP_001254364.1 CDS pdp NC_009495.1 1986119 1987423 R pyrimidine-nucleoside phosphorylase complement(1986119..1987423) Clostridium botulinum A str. ATCC 3502 5186118 YP_001254365.1 CDS deoD NC_009495.1 1987709 1988524 R catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase complement(1987709..1988524) Clostridium botulinum A str. ATCC 3502 5186119 YP_001254366.1 CDS xerD2 NC_009495.1 1988562 1989437 R This CDS is also similar to CBO1793 (27.541 identity in 305 aa overlap); tyrosine recombinase XerD complement(1988562..1989437) Clostridium botulinum A str. ATCC 3502 5186992 YP_001254367.1 CDS CBO1865A NC_009495.1 1989489 1989716 R hypothetical protein complement(1989489..1989716) Clostridium botulinum A str. ATCC 3502 5204363 YP_001254368.1 CDS spoIIM NC_009495.1 1989707 1990360 R sporulation protein complement(1989707..1990360) Clostridium botulinum A str. ATCC 3502 5186121 YP_001254369.1 CDS nudF NC_009495.1 1990565 1991101 R hydrolase, NUDIX family complement(1990565..1991101) Clostridium botulinum A str. ATCC 3502 5186122 YP_001254370.1 CDS CBO1868 NC_009495.1 1991585 1993111 R amino acid ABC transporter permease complement(1991585..1993111) Clostridium botulinum A str. ATCC 3502 5186123 YP_001254371.1 CDS CBO1869 NC_009495.1 1993928 1994686 R Similar to C-terminal region of Clostridium tetani N-acetylmuramoyl-L-alanine amidase-like protein ctc01112 SWALL:Q895Z8 (EMBL:AE015939) (266 aa) fasta scores: E(): 1.3e-27, 71.42 38d in 112 aa; exported protein complement(1993928..1994686) Clostridium botulinum A str. ATCC 3502 5186124 YP_001254372.1 CDS CBO1870 NC_009495.1 1996171 1996785 R hypothetical protein complement(1996171..1996785) Clostridium botulinum A str. ATCC 3502 5186125 YP_001254373.1 CDS CBO1871 NC_009495.1 1996921 1997715 R DNA integration/recombination protein complement(1996921..1997715) Clostridium botulinum A str. ATCC 3502 5186126 YP_001254374.1 CDS spo0A NC_009495.1 1998002 1998823 R sporulation transcription factor Spo0A complement(1998002..1998823) Clostridium botulinum A str. ATCC 3502 5186127 YP_001254375.1 CDS spoIVB NC_009495.1 1999253 2000479 R stage IV sporulation protein B complement(1999253..2000479) Clostridium botulinum A str. ATCC 3502 5186128 YP_001254376.1 CDS metA NC_009495.1 2000901 2001797 R homoserine O-succinyltransferase complement(2000901..2001797) Clostridium botulinum A str. ATCC 3502 5186129 YP_001254377.1 CDS hom NC_009495.1 2001824 2003050 R homoserine dehydrogenase complement(2001824..2003050) Clostridium botulinum A str. ATCC 3502 5186130 YP_001254378.1 CDS cysD NC_009495.1 2003090 2004370 R O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase complement(2003090..2004370) Clostridium botulinum A str. ATCC 3502 5186131 YP_001254379.1 CDS radB NC_009495.1 2004669 2006372 R DNA repair protein recN complement(2004669..2006372) Clostridium botulinum A str. ATCC 3502 5186132 YP_001254380.1 CDS argR NC_009495.1 2006385 2006837 R regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor ArgR complement(2006385..2006837) Clostridium botulinum A str. ATCC 3502 5186133 YP_001254381.1 CDS CBO1879 NC_009495.1 2006839 2007684 R ATP-NAD kinase complement(2006839..2007684) Clostridium botulinum A str. ATCC 3502 5186134 YP_001254382.1 CDS CBO1880 NC_009495.1 2007684 2008505 R hemolysin A complement(2007684..2008505) Clostridium botulinum A str. ATCC 3502 5186135 YP_001254383.1 CDS dxs NC_009495.1 2008527 2010395 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(2008527..2010395) Clostridium botulinum A str. ATCC 3502 5186136 YP_001254384.1 CDS CBO1882 NC_009495.1 2010396 2010965 R hypothetical protein complement(2010396..2010965) Clostridium botulinum A str. ATCC 3502 5186137 YP_001254385.1 CDS ispA NC_009495.1 2011766 2012650 R geranyltranstransferase complement(2011766..2012650) Clostridium botulinum A str. ATCC 3502 5186138 YP_001254386.1 CDS xseB NC_009495.1 2012763 2012978 R catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit complement(2012763..2012978) Clostridium botulinum A str. ATCC 3502 5186139 YP_001254387.1 CDS xseA NC_009495.1 2013101 2014306 R bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit complement(2013101..2014306) Clostridium botulinum A str. ATCC 3502 5186140 YP_001254388.1 CDS nusB NC_009495.1 2014377 2014808 R Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB complement(2014377..2014808) Clostridium botulinum A str. ATCC 3502 5186053 YP_001254389.1 CDS CBO1887 NC_009495.1 2014947 2015342 R alkaline shock protein complement(2014947..2015342) Clostridium botulinum A str. ATCC 3502 5186141 YP_001254390.1 CDS CBO1888 NC_009495.1 2015424 2015948 R stage III sporulation protein AH complement(2015424..2015948) Clostridium botulinum A str. ATCC 3502 5186143 YP_001254391.1 CDS spoIIIAG NC_009495.1 2016010 2016606 R stage III sporulation protein AG complement(2016010..2016606) Clostridium botulinum A str. ATCC 3502 5187058 YP_001254392.1 CDS spoIIIAF NC_009495.1 2016744 2017334 R stage III sporulation protein AF complement(2016744..2017334) Clostridium botulinum A str. ATCC 3502 5186145 YP_001254393.1 CDS spoIIIAE NC_009495.1 2017370 2018533 R stage III sporulation protein AE complement(2017370..2018533) Clostridium botulinum A str. ATCC 3502 5186146 YP_001254394.1 CDS spoIIIAD NC_009495.1 2018542 2018925 R stage III sporulation protein AD complement(2018542..2018925) Clostridium botulinum A str. ATCC 3502 5187857 YP_001254395.1 CDS spoIIIAC NC_009495.1 2018952 2019149 R stage III sporulation protein AC complement(2018952..2019149) Clostridium botulinum A str. ATCC 3502 5187700 YP_001254396.1 CDS spoIIIAB NC_009495.1 2019192 2019710 R necessary for complete engulfment of forespore; stage III sporulation protein SpoAB complement(2019192..2019710) Clostridium botulinum A str. ATCC 3502 5186149 YP_001254397.1 CDS spoIIIAA NC_009495.1 2019747 2020670 R stage III sporulation protein AA complement(2019747..2020670) Clostridium botulinum A str. ATCC 3502 5187867 YP_001254398.1 CDS CBO1896 NC_009495.1 2020865 2021284 R hypothetical protein complement(2020865..2021284) Clostridium botulinum A str. ATCC 3502 5186151 YP_001254399.1 CDS efp NC_009495.1 2021325 2021882 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(2021325..2021882) Clostridium botulinum A str. ATCC 3502 5186152 YP_001254400.1 CDS aroQ NC_009495.1 2021971 2022414 R catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase complement(2021971..2022414) Clostridium botulinum A str. ATCC 3502 5187778 YP_001254401.1 CDS aroK NC_009495.1 2022569 2023081 R shikimate kinase complement(2022569..2023081) Clostridium botulinum A str. ATCC 3502 5186154 YP_001254402.1 CDS CBO1900 NC_009495.1 2023215 2023709 R hypothetical protein complement(2023215..2023709) Clostridium botulinum A str. ATCC 3502 5186155 YP_001254403.1 CDS CBO1901 NC_009495.1 2023715 2024161 R hypothetical protein complement(2023715..2024161) Clostridium botulinum A str. ATCC 3502 5186156 YP_001254404.1 CDS CBO1902 NC_009495.1 2024177 2024893 R hypothetical protein complement(2024177..2024893) Clostridium botulinum A str. ATCC 3502 5187455 YP_001254405.1 CDS CBO1903 NC_009495.1 2024894 2025301 R lipoprotein complement(2024894..2025301) Clostridium botulinum A str. ATCC 3502 5186158 YP_001254406.1 CDS CBO1904 NC_009495.1 2025319 2025759 R hypothetical protein complement(2025319..2025759) Clostridium botulinum A str. ATCC 3502 5186159 YP_001254407.1 CDS CBO1905 NC_009495.1 2025756 2026169 R hypothetical protein complement(2025756..2026169) Clostridium botulinum A str. ATCC 3502 5186160 YP_001254408.1 CDS CBO1906 NC_009495.1 2026183 2026635 R hypothetical protein complement(2026183..2026635) Clostridium botulinum A str. ATCC 3502 5186161 YP_001254409.1 CDS CBO1907 NC_009495.1 2027037 2027441 R pilin complement(2027037..2027441) Clostridium botulinum A str. ATCC 3502 5187219 YP_001254410.1 CDS CBO1908 NC_009495.1 2027627 2028817 R type II secretion system protein F complement(2027627..2028817) Clostridium botulinum A str. ATCC 3502 5186163 YP_001254411.1 CDS CBO1909 NC_009495.1 2028962 2030491 R general secretion pathway protein E complement(2028962..2030491) Clostridium botulinum A str. ATCC 3502 5186164 YP_001254412.1 CDS CBO1910 NC_009495.1 2030640 2030768 R hypothetical protein complement(2030640..2030768) Clostridium botulinum A str. ATCC 3502 5186165 YP_001254413.1 CDS CBO1911 NC_009495.1 2030864 2031937 R lipoprotein complement(2030864..2031937) Clostridium botulinum A str. ATCC 3502 5186166 YP_001254414.1 CDS dapF NC_009495.1 2031938 2032759 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(2031938..2032759) Clostridium botulinum A str. ATCC 3502 5186167 YP_001254415.1 CDS CBO1913 NC_009495.1 2033013 2034743 D fibronectin-binding protein 2033013..2034743 Clostridium botulinum A str. ATCC 3502 5186168 YP_001254416.1 CDS truA1 NC_009495.1 2034812 2035552 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 2034812..2035552 Clostridium botulinum A str. ATCC 3502 5186169 YP_001254417.1 CDS CBO1915 NC_009495.1 2035829 2036086 R hypothetical protein complement(2035829..2036086) Clostridium botulinum A str. ATCC 3502 5187785 YP_001254418.1 CDS CBO1916 NC_009495.1 2036092 2036469 R HIT family protein complement(2036092..2036469) Clostridium botulinum A str. ATCC 3502 5186171 YP_001254419.1 CDS gadA NC_009495.1 2036980 2038383 D glutamate decarboxylase 2036980..2038383 Clostridium botulinum A str. ATCC 3502 5186172 YP_001254420.1 CDS CBO1918 NC_009495.1 2038816 2039157 R hypothetical protein complement(2038816..2039157) Clostridium botulinum A str. ATCC 3502 5187151 YP_001254421.1 CDS CBO1919 NC_009495.1 2039662 2041371 R methyl-accepting chemotaxis protein complement(2039662..2041371) Clostridium botulinum A str. ATCC 3502 5186174 YP_001254422.1 CDS closI NC_009495.1 2041841 2043424 R clostripain complement(2041841..2043424) Clostridium botulinum A str. ATCC 3502 5186175 YP_001254423.1 CDS CBO1921 NC_009495.1 2043895 2044551 D exported protein 2043895..2044551 Clostridium botulinum A str. ATCC 3502 5186176 YP_001254424.1 CDS CBO1921b NC_009495.1 2044553 2045254 D DNA-binding response regulator 2044553..2045254 Clostridium botulinum A str. ATCC 3502 5228408 YP_001254425.1 CDS CBO1922 NC_009495.1 2045244 2047157 D sensor histidine kinase 2045244..2047157 Clostridium botulinum A str. ATCC 3502 5186177 YP_001254426.1 CDS msrA NC_009495.1 2047328 2047801 R this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A complement(2047328..2047801) Clostridium botulinum A str. ATCC 3502 5186178 YP_001254427.1 CDS CBO1924 NC_009495.1 2048191 2048982 D response regulator 2048191..2048982 Clostridium botulinum A str. ATCC 3502 5186179 YP_001254428.1 CDS CBO1925 NC_009495.1 2049142 2050605 R sensor histidine kinase complement(2049142..2050605) Clostridium botulinum A str. ATCC 3502 5187747 YP_001254429.1 CDS CBO1926 NC_009495.1 2050602 2051288 R DNA-binding response regulator complement(2050602..2051288) Clostridium botulinum A str. ATCC 3502 5186181 YP_001254430.1 CDS CBO1927 NC_009495.1 2051571 2052347 R hypothetical protein complement(2051571..2052347) Clostridium botulinum A str. ATCC 3502 5186182 YP_001254431.1 CDS CBO1928 NC_009495.1 2052503 2053291 R ABC transporter permease complement(2052503..2053291) Clostridium botulinum A str. ATCC 3502 5187266 YP_001254432.1 CDS CBO1929 NC_009495.1 2053354 2054097 R ABC transporter ATP-binding protein complement(2053354..2054097) Clostridium botulinum A str. ATCC 3502 5186184 YP_001254433.1 CDS CBO1930 NC_009495.1 2054687 2056549 R ABC transporter ATP-binding protein/permease complement(2054687..2056549) Clostridium botulinum A str. ATCC 3502 5187822 YP_001254434.1 CDS CBO1931 NC_009495.1 2056546 2058873 R ABC transporter permease/ATP-binding protein complement(2056546..2058873) Clostridium botulinum A str. ATCC 3502 5186186 YP_001254435.1 CDS CBO1932 NC_009495.1 2059277 2059720 D MarR family transcriptional regulator 2059277..2059720 Clostridium botulinum A str. ATCC 3502 5187757 YP_001254436.1 CDS chlN NC_009495.1 2060032 2060715 R molybdopterin biosynthesis protein MoeB complement(2060032..2060715) Clostridium botulinum A str. ATCC 3502 5187661 YP_001254437.1 CDS moaD NC_009495.1 2060717 2060944 R molybdopterin converting factor subunit 1 complement(2060717..2060944) Clostridium botulinum A str. ATCC 3502 5187640 YP_001254438.1 CDS aorA NC_009495.1 2061097 2062914 R aldehyde ferredoxin oxidoreductase complement(2061097..2062914) Clostridium botulinum A str. ATCC 3502 5187636 YP_001254439.1 CDS CBO1936 NC_009495.1 2063029 2063154 R hypothetical protein complement(2063029..2063154) Clostridium botulinum A str. ATCC 3502 5187642 YP_001254440.1 CDS aorR NC_009495.1 2063323 2065218 R aor transcriptional regulator complement(2063323..2065218) Clostridium botulinum A str. ATCC 3502 5186192 YP_001254441.1 CDS CBO1938 NC_009495.1 2065268 2065708 R MOSC domain-containing protein complement(2065268..2065708) Clostridium botulinum A str. ATCC 3502 5186193 YP_001254442.1 CDS moaC NC_009495.1 2065710 2066189 R MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC complement(2065710..2066189) Clostridium botulinum A str. ATCC 3502 5186194 YP_001254443.1 CDS bisA NC_009495.1 2066193 2067152 R molybdenum cofactor biosynthesis protein A complement(2066193..2067152) Clostridium botulinum A str. ATCC 3502 5186195 YP_001254444.1 CDS moeA2 NC_009495.1 2067211 2069115 R LysR family transcriptional regulator complement(2067211..2069115) Clostridium botulinum A str. ATCC 3502 5186196 YP_001254445.1 CDS bisB NC_009495.1 2069127 2070353 R molybdopterin biosynthesis protein MoeA complement(2069127..2070353) Clostridium botulinum A str. ATCC 3502 5186197 YP_001254446.1 CDS chlG NC_009495.1 2070377 2070865 R molybdopterin biosynthesis protein Mog complement(2070377..2070865) Clostridium botulinum A str. ATCC 3502 5187641 YP_001254447.1 CDS tupC NC_009495.1 2070960 2071652 R tungstate ABC transporter ATP-binding protein complement(2070960..2071652) Clostridium botulinum A str. ATCC 3502 5187637 YP_001254448.1 CDS tupB NC_009495.1 2071649 2072320 R tungstate ABC transporter permease complement(2071649..2072320) Clostridium botulinum A str. ATCC 3502 5187644 YP_001254449.1 CDS tupA NC_009495.1 2072329 2073180 R tungstate ABC transporter tungstate-binding protein complement(2072329..2073180) Clostridium botulinum A str. ATCC 3502 5186201 YP_001254450.1 CDS CBO1947 NC_009495.1 2073399 2074721 R drug/sodium antiporter complement(2073399..2074721) Clostridium botulinum A str. ATCC 3502 5186202 YP_001254451.1 CDS CBO1948 NC_009495.1 2074721 2074918 R Similar to N-terminal region of Thermoanaerobacter tengcongensis acetyltransferases, including N-acetylases of ribosomal proteins riml or tte1540 SWALL:Q8R9Q9 (EMBL:AE013110) (185 aa) fasta scores: E(): 1.6, 35.71 38d in 56 aa; hypothetical protein complement(2074721..2074918) Clostridium botulinum A str. ATCC 3502 5186203 YP_001254452.1 CDS CBO1949 NC_009495.1 2075159 2075803 R hypothetical protein complement(2075159..2075803) Clostridium botulinum A str. ATCC 3502 5187649 YP_001254453.1 CDS CBO1950 NC_009495.1 2076125 2076796 R ABC transporter ATP-binding protein complement(2076125..2076796) Clostridium botulinum A str. ATCC 3502 5186205 YP_001254454.1 CDS CBO1951 NC_009495.1 2076811 2078274 R ABC transporter permease complement(2076811..2078274) Clostridium botulinum A str. ATCC 3502 5186206 YP_001254455.1 CDS CBO1952 NC_009495.1 2079073 2080830 R ABC transporter permease/ATP-binding protein complement(2079073..2080830) Clostridium botulinum A str. ATCC 3502 5186207 YP_001254456.1 CDS CBO1953 NC_009495.1 2080827 2082557 R ABC transporter ATP-binding/permease complement(2080827..2082557) Clostridium botulinum A str. ATCC 3502 5186208 YP_001254457.1 CDS CBO1954 NC_009495.1 2082672 2083493 D MerR family transcriptional regulator 2082672..2083493 Clostridium botulinum A str. ATCC 3502 5186209 YP_001254458.1 CDS CBO1955 NC_009495.1 2083912 2084538 D NADPH-dependent FMN reductase 2083912..2084538 Clostridium botulinum A str. ATCC 3502 5186210 YP_001254459.1 CDS CBO1956 NC_009495.1 2085217 2085378 R hypothetical protein complement(2085217..2085378) Clostridium botulinum A str. ATCC 3502 5186211 YP_001254460.1 CDS CBO1957 NC_009495.1 2085832 2086830 D Similar to internal region of interlanin from various organisms including Listeria monocytogenes internalin G inlG. It is also similar to CBO1965 (76.205 id. in 332 aa overlap); also similar to CBO1965 (76.2 38d); leucine-rich repeat-containing protein 2085832..2086830 Clostridium botulinum A str. ATCC 3502 5186212 YP_001254461.1 CDS CBO1958 NC_009495.1 2086852 2088900 D also similar to CBO1966 (79.2 38d); secreted carbohydrate-binding protein 2086852..2088900 Clostridium botulinum A str. ATCC 3502 5186213 YP_001254462.1 CDS CBO1959 NC_009495.1 2089062 2091152 R sigma-54 dependent transcriptional regulator complement(2089062..2091152) Clostridium botulinum A str. ATCC 3502 5186214 YP_001254463.1 CDS CBO1960 NC_009495.1 2091515 2091769 R hypothetical protein complement(2091515..2091769) Clostridium botulinum A str. ATCC 3502 5186215 YP_001254464.1 CDS CBO1961 NC_009495.1 2091782 2092150 R endoribonuclease L-PSP complement(2091782..2092150) Clostridium botulinum A str. ATCC 3502 5186216 YP_001254465.1 CDS CBO1962 NC_009495.1 2092192 2093463 R sodium:dicarboxylate symporter complement(2092192..2093463) Clostridium botulinum A str. ATCC 3502 5186217 YP_001254466.1 CDS CBO1963 NC_009495.1 2093509 2094678 R aminotransferase, classes I and II complement(2093509..2094678) Clostridium botulinum A str. ATCC 3502 5186218 YP_001254467.1 CDS CBO1964 NC_009495.1 2094992 2096284 D hypothetical protein 2094992..2096284 Clostridium botulinum A str. ATCC 3502 5186219 YP_001254468.1 CDS CBO1965 NC_009495.1 2096624 2097619 D Similar to internal region of interlanin from various organisms including Listeria monocytogenes internalin G inlG. It is also similar to CBO1957 (76.205 id. in 332 aa overlap); also similar to CBO1957 (76.2 38d); leucine-rich repeat-containing protein 2096624..2097619 Clostridium botulinum A str. ATCC 3502 5186220 YP_001254469.1 CDS CBO1966 NC_009495.1 2097640 2099859 D also similar to CBO1958 (79.2 38d); secreted protein 2097640..2099859 Clostridium botulinum A str. ATCC 3502 5186221 YP_001254470.1 CDS CBO1967 NC_009495.1 2100060 2101499 R sensor histidine kinase complement(2100060..2101499) Clostridium botulinum A str. ATCC 3502 5186222 YP_001254471.1 CDS CBO1968 NC_009495.1 2101489 2102154 R DNA-binding response regulator complement(2101489..2102154) Clostridium botulinum A str. ATCC 3502 5186223 YP_001254472.1 CDS CBO1969 NC_009495.1 2102654 2103469 R hypothetical protein complement(2102654..2103469) Clostridium botulinum A str. ATCC 3502 5186224 YP_001254473.1 CDS CBO1970 NC_009495.1 2103495 2104220 R ABC transporter permease complement(2103495..2104220) Clostridium botulinum A str. ATCC 3502 5186225 YP_001254474.1 CDS CBO1971 NC_009495.1 2104265 2105698 R ABC transporter ATP-binding protein complement(2104265..2105698) Clostridium botulinum A str. ATCC 3502 5187142 YP_001254475.1 CDS CBO1972 NC_009495.1 2105701 2106267 R ABC transporter permease complement(2105701..2106267) Clostridium botulinum A str. ATCC 3502 5187373 YP_001254476.1 CDS CBO1973 NC_009495.1 2106428 2107495 R alanine racemase complement(2106428..2107495) Clostridium botulinum A str. ATCC 3502 5186228 YP_001254477.1 CDS gerAB1 NC_009495.1 2107884 2108969 D This CDS is also similar to CBO1976 (65.374 38d. in 361 aa overlap), CBO1978 (49.5 38d. in 361 aa overlap),CBO2796 (35.6 38d. in 365 aa overlap) and to CBO2300 (5.556 38d. in 360 aa overlap).; spore germination protein 2107884..2108969 Clostridium botulinum A str. ATCC 3502 5186229 YP_001254478.1 CDS gerAA NC_009495.1 2109052 2110554 D spore germination protein 2109052..2110554 Clostridium botulinum A str. ATCC 3502 5186230 YP_001254479.1 CDS gerAB2 NC_009495.1 2110541 2111632 D This CDS is also similar to CBO1974 (65.374 38d. in 361 aa overlap), CBO1978 (50.413 38d. in 363 aa overlap),CBO2796 (36.957 38d. in 368 aa overlap) and to CBO2300 (32.682 38d. in 358 aa overlap).; spore germination protein 2110541..2111632 Clostridium botulinum A str. ATCC 3502 5187850 YP_001254480.1 CDS gerAC NC_009495.1 2111616 2112734 D spore germination protein 2111616..2112734 Clostridium botulinum A str. ATCC 3502 5187230 YP_001254481.1 CDS gerAB3 NC_009495.1 2112776 2113885 D This CDS is also similar to CBO1976 (50.4 38d. in 363 aa overlap), CBO1974 (49.58 38d. in 361 aa overlap),CBO2300 (36.827 38d. in 353 aa overlap) and to CBO2796 (37.7 38d. in 366 aa overlap); spore germination protein 2112776..2113885 Clostridium botulinum A str. ATCC 3502 5186233 YP_001254482.1 CDS CBO1979 NC_009495.1 2113913 2114341 R hypothetical protein complement(2113913..2114341) Clostridium botulinum A str. ATCC 3502 5187625 YP_001254483.1 CDS CBO1980 NC_009495.1 2114411 2114572 D hypothetical protein 2114411..2114572 Clostridium botulinum A str. ATCC 3502 5186235 YP_001254484.1 CDS CBO1981 NC_009495.1 2114636 2114968 D 4-carboxymuconolactone decarboxylase 2114636..2114968 Clostridium botulinum A str. ATCC 3502 5186236 YP_001254485.1 CDS CBO1982 NC_009495.1 2114981 2115961 D radical SAM domain protein 2114981..2115961 Clostridium botulinum A str. ATCC 3502 5186237 YP_001254486.1 CDS CBO1983 NC_009495.1 2116142 2116897 D hypothetical protein 2116142..2116897 Clostridium botulinum A str. ATCC 3502 5186238 YP_001254487.1 CDS CBO1984 NC_009495.1 2117115 2118545 R the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter complement(2117115..2118545) Clostridium botulinum A str. ATCC 3502 5186239 YP_001254488.1 CDS htpG NC_009495.1 2119143 2121023 R molecular chaperone; heat shock protein 90 complement(2119143..2121023) Clostridium botulinum A str. ATCC 3502 5186240 YP_001254489.1 CDS CBO1986 NC_009495.1 2121568 2123133 D MutS domain-containing protein 2121568..2123133 Clostridium botulinum A str. ATCC 3502 5186241 YP_001254490.1 CDS treB NC_009495.1 2123615 2125042 D PTS system, trehalose-specific IIBC component 2123615..2125042 Clostridium botulinum A str. ATCC 3502 5186242 YP_001254491.1 CDS treA NC_009495.1 2125124 2126791 D alpha,alpha-phosphotrehalase 2125124..2126791 Clostridium botulinum A str. ATCC 3502 5187208 YP_001254492.1 CDS treR NC_009495.1 2126824 2127534 D trehalose operon repressor 2126824..2127534 Clostridium botulinum A str. ATCC 3502 5186244 YP_001254493.1 CDS CBO1990 NC_009495.1 2127896 2128351 R PTS system fructose family transporter subunit IIA complement(2127896..2128351) Clostridium botulinum A str. ATCC 3502 5186245 YP_001254494.1 CDS CBO1991 NC_009495.1 2128609 2130006 R PTS system fructose family transporter subunit IIBC complement(2128609..2130006) Clostridium botulinum A str. ATCC 3502 5186246 YP_001254495.1 CDS CBO1992 NC_009495.1 2130007 2130930 R This CDS is also similar to CBO1763 (35.644 identity in 303 aa overlap).; kinase, pfkB family complement(2130007..2130930) Clostridium botulinum A str. ATCC 3502 5187820 YP_001254496.1 CDS gatY NC_009495.1 2130950 2131810 R catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway; tagatose-bisphosphate aldolase complement(2130950..2131810) Clostridium botulinum A str. ATCC 3502 5186248 YP_001254497.1 CDS CBO1994 NC_009495.1 2132010 2132747 R transcriptional regulator complement(2132010..2132747) Clostridium botulinum A str. ATCC 3502 5186249 YP_001254498.1 CDS CBO1995 NC_009495.1 2132864 2133238 R hypothetical protein complement(2132864..2133238) Clostridium botulinum A str. ATCC 3502 5186250 YP_001254499.1 CDS CBO1996 NC_009495.1 2133600 2133995 D endoribonuclease L-PSP 2133600..2133995 Clostridium botulinum A str. ATCC 3502 5186251 YP_001254500.1 CDS CBO1997 NC_009495.1 2134343 2135212 R radical SAM domain protein complement(2134343..2135212) Clostridium botulinum A str. ATCC 3502 5186252 YP_001254501.1 CDS CBO1998 NC_009495.1 2135476 2135598 R hypothetical protein complement(2135476..2135598) Clostridium botulinum A str. ATCC 3502 5186253 YP_001254502.1 CDS gldA NC_009495.1 2135788 2136879 D forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; glycerol dehydrogenase 2135788..2136879 Clostridium botulinum A str. ATCC 3502 5186254 YP_001254503.1 CDS CBO2000 NC_009495.1 2137371 2139020 R methyl-accepting chemotaxis protein complement(2137371..2139020) Clostridium botulinum A str. ATCC 3502 5186255 YP_001254504.1 CDS CBO2001 NC_009495.1 2139014 2139127 R hypothetical protein complement(2139014..2139127) Clostridium botulinum A str. ATCC 3502 5186256 YP_001254505.1 CDS CBO2002 NC_009495.1 2139192 2140160 R alanine racemase complement(2139192..2140160) Clostridium botulinum A str. ATCC 3502 5186257 YP_001254506.1 CDS CBO2003 NC_009495.1 2140610 2140888 R hypothetical protein complement(2140610..2140888) Clostridium botulinum A str. ATCC 3502 5186258 YP_001254507.1 CDS CBO2004 NC_009495.1 2141358 2142422 D oxidoreductase 2141358..2142422 Clostridium botulinum A str. ATCC 3502 5186259 YP_001254508.1 CDS CBO2005 NC_009495.1 2142543 2143088 R Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis; adenine phosphoribosyltransferase complement(2142543..2143088) Clostridium botulinum A str. ATCC 3502 5186260 YP_001254509.1 CDS CBO2006 NC_009495.1 2143104 2144168 R xanthine/uracil permease complement(2143104..2144168) Clostridium botulinum A str. ATCC 3502 5186261 YP_001254510.1 CDS CBO2007 NC_009495.1 2144611 2145159 R signaling protein complement(2144611..2145159) Clostridium botulinum A str. ATCC 3502 5186262 YP_001254511.1 CDS CBO2008 NC_009495.1 2145393 2146697 R hypothetical protein complement(2145393..2146697) Clostridium botulinum A str. ATCC 3502 5187987 YP_001254512.1 CDS CBO2009 NC_009495.1 2146957 2148732 R sigma-54 dependent transcriptional regulator complement(2146957..2148732) Clostridium botulinum A str. ATCC 3502 5186264 YP_001254513.1 CDS CBO2010 NC_009495.1 2149198 2150328 D Similar to N-terminal region of several ATP-dependent RNA helicases.; ATP-dependent RNA helicase, DEAD/DEAH box family 2149198..2150328 Clostridium botulinum A str. ATCC 3502 5186265 YP_001254514.1 CDS CBO2011 NC_009495.1 2150648 2151445 D SCP-like extracellular protein 2150648..2151445 Clostridium botulinum A str. ATCC 3502 5187080 YP_001254515.1 CDS CBO2012 NC_009495.1 2151548 2152894 R GntR family transcriptional regulator complement(2151548..2152894) Clostridium botulinum A str. ATCC 3502 5187321 YP_001254516.1 CDS CBO2013 NC_009495.1 2153043 2153951 D hypothetical protein 2153043..2153951 Clostridium botulinum A str. ATCC 3502 5186268 YP_001254517.1 CDS CBO2015 NC_009495.1 2154249 2155400 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(2154249..2155400) Clostridium botulinum A str. ATCC 3502 5187019 YP_001254518.1 CDS CBO2016 NC_009495.1 2155420 2156142 R polar amino acid ABC transporter ATP-binding protein complement(2155420..2156142) Clostridium botulinum A str. ATCC 3502 5186271 YP_001254519.1 CDS CBO2017 NC_009495.1 2156129 2156815 R amino acid ABC transporter permease complement(2156129..2156815) Clostridium botulinum A str. ATCC 3502 5186272 YP_001254520.1 CDS CBO2018 NC_009495.1 2156885 2157703 R amino acid ABC transporter substrate-binding protein complement(2156885..2157703) Clostridium botulinum A str. ATCC 3502 5187459 YP_001254521.1 CDS CBO2019 NC_009495.1 2157789 2159069 R hypothetical protein complement(2157789..2159069) Clostridium botulinum A str. ATCC 3502 5186274 YP_001254522.1 CDS CBO2020 NC_009495.1 2159434 2160573 R class V aminotransferase complement(2159434..2160573) Clostridium botulinum A str. ATCC 3502 5186275 YP_001254523.1 CDS catB NC_009495.1 2160686 2161351 R chloramphenicol acetyltransferase complement(2160686..2161351) Clostridium botulinum A str. ATCC 3502 5186276 YP_001254524.1 CDS CBO2022 NC_009495.1 2161846 2162058 R hypothetical protein complement(2161846..2162058) Clostridium botulinum A str. ATCC 3502 5186277 YP_001254525.1 CDS CBO2023 NC_009495.1 2162158 2162307 R hypothetical protein complement(2162158..2162307) Clostridium botulinum A str. ATCC 3502 5186278 YP_001254526.1 CDS CBO2024 NC_009495.1 2162319 2162540 R hypothetical protein complement(2162319..2162540) Clostridium botulinum A str. ATCC 3502 5186279 YP_001254527.1 CDS CBO2025 NC_009495.1 2162678 2162929 R hypothetical protein complement(2162678..2162929) Clostridium botulinum A str. ATCC 3502 5186280 YP_001254528.1 CDS CBO2026 NC_009495.1 2163113 2163829 R hypothetical protein complement(2163113..2163829) Clostridium botulinum A str. ATCC 3502 5186281 YP_001254529.1 CDS CBO2027 NC_009495.1 2164054 2164209 R transcriptional regulator complement(2164054..2164209) Clostridium botulinum A str. ATCC 3502 5186282 YP_001254530.1 CDS CBO2028 NC_009495.1 2164619 2165968 R This CDS is also similar to the adjacent CDS,CBO2029, (77.828 38dentity in 442 aa overlap); proton-dependent oligopeptide transporter complement(2164619..2165968) Clostridium botulinum A str. ATCC 3502 5186283 YP_001254531.1 CDS CBO2029 NC_009495.1 2166279 2167625 R This CDS is also similar to the adjacent CDS,CBO2028, (77.828 38dentity in 442 aa overlap); proton-dependent oligopeptide transporter complement(2166279..2167625) Clostridium botulinum A str. ATCC 3502 5187674 YP_001254532.1 CDS pepQ NC_009495.1 2168134 2169222 D Xaa-Pro dipeptidase 2168134..2169222 Clostridium botulinum A str. ATCC 3502 5186285 YP_001254533.1 CDS pepIP NC_009495.1 2169304 2170185 D proline iminopeptidase 2169304..2170185 Clostridium botulinum A str. ATCC 3502 5186286 YP_001254534.1 CDS CBO2032 NC_009495.1 2170335 2170484 R hypothetical protein complement(2170335..2170484) Clostridium botulinum A str. ATCC 3502 5186287 YP_001254535.1 CDS CBO2033 NC_009495.1 2170477 2171970 R sodium:neurotransmitter symporter family protein complement(2170477..2171970) Clostridium botulinum A str. ATCC 3502 5186288 YP_001254536.1 CDS CBO2034 NC_009495.1 2172379 2173773 R GntR family transcriptional regulator complement(2172379..2173773) Clostridium botulinum A str. ATCC 3502 5186289 YP_001254537.1 CDS CBO2035 NC_009495.1 2173891 2174670 D hypothetical protein 2173891..2174670 Clostridium botulinum A str. ATCC 3502 5186290 YP_001254538.1 CDS CBO2036 NC_009495.1 2174755 2175156 D endoribonuclease 2174755..2175156 Clostridium botulinum A str. ATCC 3502 5186291 YP_001254539.1 CDS CBO2037 NC_009495.1 2175266 2175913 R hypothetical protein complement(2175266..2175913) Clostridium botulinum A str. ATCC 3502 5186292 YP_001254540.1 CDS CBO2038 NC_009495.1 2176146 2178623 R thrombospondin type 3 repeat protein complement(2176146..2178623) Clostridium botulinum A str. ATCC 3502 5186293 YP_001254541.1 CDS CBO2039 NC_009495.1 2179096 2179596 R nitroreductase complement(2179096..2179596) Clostridium botulinum A str. ATCC 3502 5186294 YP_001254542.1 CDS CBO2040 NC_009495.1 2179701 2181644 R hypothetical protein complement(2179701..2181644) Clostridium botulinum A str. ATCC 3502 5186295 YP_001254543.1 CDS CBO2041 NC_009495.1 2181659 2182894 R hypothetical protein complement(2181659..2182894) Clostridium botulinum A str. ATCC 3502 5187370 YP_001254544.1 CDS CBO2042 NC_009495.1 2182891 2185002 R hypothetical protein complement(2182891..2185002) Clostridium botulinum A str. ATCC 3502 5186297 YP_001254545.1 CDS CBO2043 NC_009495.1 2185124 2186917 R in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; hypothetical protein complement(2185124..2186917) Clostridium botulinum A str. ATCC 3502 5186298 YP_001254546.1 CDS CBO2044 NC_009495.1 2187221 2187790 R TetR family transcriptional regulator complement(2187221..2187790) Clostridium botulinum A str. ATCC 3502 5186299 YP_001254547.1 CDS CBO2045 NC_009495.1 2187966 2188409 R Also similar to CBO0713 (67.1 38d); hypothetical protein complement(2187966..2188409) Clostridium botulinum A str. ATCC 3502 5186300 YP_001254548.1 CDS CBO2050 NC_009495.1 2189862 2190869 D Also similar to the downstream CDS CBO2051 (56.7 id).; glycosyl transferase family protein 2189862..2190869 Clostridium botulinum A str. ATCC 3502 5186305 YP_001254549.1 CDS CBO2051 NC_009495.1 2191329 2192390 R Also similar to the downstream CDS CBO2050 (56.7 id).; glycosyl transferase family protein complement(2191329..2192390) Clostridium botulinum A str. ATCC 3502 5186306 YP_001254550.1 CDS CBO2052 NC_009495.1 2192434 2193078 R transferase, hexapeptide repeat family complement(2192434..2193078) Clostridium botulinum A str. ATCC 3502 5186307 YP_001254551.1 CDS CBO2053 NC_009495.1 2193170 2194309 R DegT/DnrJ/EryC1/StrS family aminotransferase complement(2193170..2194309) Clostridium botulinum A str. ATCC 3502 5186308 YP_001254552.1 CDS CBO2054 NC_009495.1 2194355 2195254 R glycosyl transferase family protein complement(2194355..2195254) Clostridium botulinum A str. ATCC 3502 5186309 YP_001254553.1 CDS CBO2055 NC_009495.1 2195456 2196517 D glucose-1-phosphate thymidylyltransferase 2195456..2196517 Clostridium botulinum A str. ATCC 3502 5186310 YP_001254554.1 CDS rmlB NC_009495.1 2196559 2197539 D dTDP-glucose 4,6-dehydratase 2196559..2197539 Clostridium botulinum A str. ATCC 3502 5186311 YP_001254555.1 CDS CBO2057 NC_009495.1 2197582 2197740 D no significant database hits; hypothetical protein 2197582..2197740 Clostridium botulinum A str. ATCC 3502 5186312 YP_001254556.1 CDS CBO2058 NC_009495.1 2197816 2198109 D Also similar to the downstream CDS CBO2059 (87.6 id) and; hypothetical protein 2197816..2198109 Clostridium botulinum A str. ATCC 3502 5186313 YP_001254557.1 CDS CBO2059 NC_009495.1 2198360 2198653 D Also similar to the upstream CDS CBO2058 (87.6 38d) and; hypothetical protein 2198360..2198653 Clostridium botulinum A str. ATCC 3502 5186314 YP_001254558.1 CDS CBO2060 NC_009495.1 2199065 2199217 R hypothetical protein complement(2199065..2199217) Clostridium botulinum A str. ATCC 3502 5186315 YP_001254559.1 CDS CBO2061 NC_009495.1 2199690 2200979 R secreted lipase complement(2199690..2200979) Clostridium botulinum A str. ATCC 3502 5186316 YP_001254560.1 CDS CBO2062 NC_009495.1 2201830 2202504 R vanZF protein complement(2201830..2202504) Clostridium botulinum A str. ATCC 3502 5186317 YP_001254561.1 CDS CBO2063 NC_009495.1 2202754 2203023 R hypothetical protein complement(2202754..2203023) Clostridium botulinum A str. ATCC 3502 5186318 YP_001254562.1 CDS CBO2064 NC_009495.1 2203288 2203929 R Similar, but extended at the C-terminus, to Bacillus anthracis hypothetical protein ba2131 SWALL:Q81RB8 (EMBL:AE017030) (156 aa) fasta scores: E(): 2.1e-17, 41.4 38d in 157 aa, and to full-length Bacillus cereus ABC transporter permease bc4218 SWALL:Q818N1 (EMBL:AE017011) (207 aa) fasta scores: E(): 7.2e-05, 22.83 38d in 219 aa. CDS overlaps 7 nt at the N-terminus with CBO2065; ABC transporter permease complement(2203288..2203929) Clostridium botulinum A str. ATCC 3502 5186319 YP_001254563.1 CDS CBO2065 NC_009495.1 2203923 2204789 R CDS overlaps 7 nt at the C-terminus with CBO2064; ABC transporter ATP-binding protein complement(2203923..2204789) Clostridium botulinum A str. ATCC 3502 5186320 YP_001254564.1 CDS CBO2066 NC_009495.1 2204789 2205166 R GntR family transcriptional regulator complement(2204789..2205166) Clostridium botulinum A str. ATCC 3502 5186321 YP_001254565.1 CDS CBO2067 NC_009495.1 2205397 2205525 R hypothetical protein complement(2205397..2205525) Clostridium botulinum A str. ATCC 3502 5186322 YP_001254566.1 CDS CBO2068 NC_009495.1 2205794 2206978 R glucosyltransferase complement(2205794..2206978) Clostridium botulinum A str. ATCC 3502 5187581 YP_001254567.1 CDS CBO2069 NC_009495.1 2206971 2207276 R AbrB family transcriptional regulator complement(2206971..2207276) Clostridium botulinum A str. ATCC 3502 5186324 YP_001254568.1 CDS CBO2070 NC_009495.1 2207525 2208301 R hypothetical protein complement(2207525..2208301) Clostridium botulinum A str. ATCC 3502 5186325 YP_001254569.1 CDS codA NC_009495.1 2208634 2209899 R Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase complement(2208634..2209899) Clostridium botulinum A str. ATCC 3502 5186327 YP_001254570.1 CDS codB NC_009495.1 2209943 2211214 R cytosine permease complement(2209943..2211214) Clostridium botulinum A str. ATCC 3502 5186328 YP_001254571.1 CDS CBO2074 NC_009495.1 2211559 2211711 R no significant database hits; hypothetical protein complement(2211559..2211711) Clostridium botulinum A str. ATCC 3502 5186329 YP_001254572.1 CDS CBO2075 NC_009495.1 2211857 2212981 R radical SAM domain protein complement(2211857..2212981) Clostridium botulinum A str. ATCC 3502 5186330 YP_001254573.1 CDS CBO2076 NC_009495.1 2212995 2213153 R no significant database hits; hypothetical protein complement(2212995..2213153) Clostridium botulinum A str. ATCC 3502 5186331 YP_001254574.1 CDS CBO2077 NC_009495.1 2213888 2215351 R ABC transporter ATP-binding protein complement(2213888..2215351) Clostridium botulinum A str. ATCC 3502 5186332 YP_001254575.1 CDS CBO2078 NC_009495.1 2215365 2216090 R hypothetical protein complement(2215365..2216090) Clostridium botulinum A str. ATCC 3502 5186333 YP_001254576.1 CDS CBO2079 NC_009495.1 2216087 2216698 R hypothetical protein complement(2216087..2216698) Clostridium botulinum A str. ATCC 3502 5186334 YP_001254577.1 CDS CBO2080 NC_009495.1 2216918 2217880 D AraC family transcriptional regulator 2216918..2217880 Clostridium botulinum A str. ATCC 3502 5187815 YP_001254578.1 CDS CBO2081 NC_009495.1 2217943 2218170 R no significant database hits; hypothetical protein complement(2217943..2218170) Clostridium botulinum A str. ATCC 3502 5186336 YP_001254579.1 CDS CBO2082 NC_009495.1 2218250 2218732 R acyltransferase complement(2218250..2218732) Clostridium botulinum A str. ATCC 3502 5187290 YP_001254580.1 CDS CBO2083 NC_009495.1 2219222 2219743 R no significant database hits; hypothetical protein complement(2219222..2219743) Clostridium botulinum A str. ATCC 3502 5187301 YP_001254581.1 CDS CBO2084 NC_009495.1 2220017 2220832 R CDS is truncated 37 residues at the C-terminus relative to its closest fasta match; hypothetical protein complement(2220017..2220832) Clostridium botulinum A str. ATCC 3502 5187525 YP_001254582.1 CDS mutT2 NC_009495.1 2221014 2221412 D Also similar to CBO0653 (71.21 38d); mutator protein 2221014..2221412 Clostridium botulinum A str. ATCC 3502 5187286 YP_001254583.1 CDS CBO2086 NC_009495.1 2221423 2224329 R DNA repair helicase complement(2221423..2224329) Clostridium botulinum A str. ATCC 3502 5187285 YP_001254584.1 CDS CBO2087 NC_009495.1 2224387 2224503 R no significant database hits; hypothetical protein complement(2224387..2224503) Clostridium botulinum A str. ATCC 3502 5187283 YP_001254585.1 CDS CBO2088 NC_009495.1 2224902 2225030 R N-terminus is similar to the N-terminus of Clostridium tetani hypothetical protein ctc01935 SWALL:Q892Z7 (EMBL:AE015942) (181 aa) fasta scores: E(): 3.6e-05, 80.76 38d in 26 aa; hypothetical protein complement(2224902..2225030) Clostridium botulinum A str. ATCC 3502 5186343 YP_001254586.1 CDS CBO2089 NC_009495.1 2225325 2227106 R DNA helicase complement(2225325..2227106) Clostridium botulinum A str. ATCC 3502 5186344 YP_001254587.1 CDS CBO2090 NC_009495.1 2227099 2229138 R hypothetical protein complement(2227099..2229138) Clostridium botulinum A str. ATCC 3502 5187037 YP_001254588.1 CDS CBO2091 NC_009495.1 2229543 2229764 R no significant database hits; hypothetical protein complement(2229543..2229764) Clostridium botulinum A str. ATCC 3502 5186346 YP_001254589.1 CDS CBO2092 NC_009495.1 2229828 2229971 R no significant database hits; hypothetical protein complement(2229828..2229971) Clostridium botulinum A str. ATCC 3502 5186347 YP_001254590.1 CDS CBO2093 NC_009495.1 2230209 2231063 R C-terminus is similar to the N-terminus of Vibrio vulnificus hypothetical protein Vv1889 SWALL:Q7MKB6 (EMBL:AP005337) (293 aa) fasta scores: E(): 8.6e-26,53.28 38d in 152 aa; hypothetical protein complement(2230209..2231063) Clostridium botulinum A str. ATCC 3502 5186348 YP_001254591.1 CDS CBO2094 NC_009495.1 2231077 2231475 R no significant database hits; hypothetical protein complement(2231077..2231475) Clostridium botulinum A str. ATCC 3502 5186349 YP_001254592.1 CDS CBO2095 NC_009495.1 2231493 2232254 R no significant database hits; hypothetical protein complement(2231493..2232254) Clostridium botulinum A str. ATCC 3502 5186350 YP_001254593.1 CDS CBO2096 NC_009495.1 2232663 2233613 R no significant database hits; hypothetical protein complement(2232663..2233613) Clostridium botulinum A str. ATCC 3502 5186351 YP_001254594.1 CDS CBO2097 NC_009495.1 2233683 2233832 R no significant database hits; hypothetical protein complement(2233683..2233832) Clostridium botulinum A str. ATCC 3502 5186352 YP_001254595.1 CDS CBO2098 NC_009495.1 2234161 2235045 R AraC family transcriptional regulator complement(2234161..2235045) Clostridium botulinum A str. ATCC 3502 5186353 YP_001254596.1 CDS CBO2099 NC_009495.1 2235094 2235999 R proline iminopeptidase complement(2235094..2235999) Clostridium botulinum A str. ATCC 3502 5186354 YP_001254597.1 CDS CBO2101 NC_009495.1 2236718 2237641 R UDP-glucose epimerase complement(2236718..2237641) Clostridium botulinum A str. ATCC 3502 5186356 YP_001254598.1 CDS CBO2102 NC_009495.1 2237936 2239285 D glycosyltransferase 2237936..2239285 Clostridium botulinum A str. ATCC 3502 5186357 YP_001254599.1 CDS CBO2103 NC_009495.1 2239309 2241933 D glycosyltransferase 2239309..2241933 Clostridium botulinum A str. ATCC 3502 5186358 YP_001254600.1 CDS tet(M) NC_009495.1 2242289 2244244 R tetracycline resistance protein complement(2242289..2244244) Clostridium botulinum A str. ATCC 3502 5186359 YP_001254601.1 CDS CBO2105 NC_009495.1 2244774 2246444 R Codons 380 to 501 are similar to codons 115 to 235 of Streptococcus equi immunoreactive protein Se117 SWALL:Q8GLG3 (EMBL:AY137523) (706 aa) fasta scores: E(): 3e-05, 31.14 38d in 122 aa; glycosyl hydrolase complement(2244774..2246444) Clostridium botulinum A str. ATCC 3502 5186360 YP_001254602.1 CDS cchA NC_009495.1 2246993 2247283 R microcompartments family protein complement(2246993..2247283) Clostridium botulinum A str. ATCC 3502 5186361 YP_001254603.1 CDS CBO2107 NC_009495.1 2247357 2248007 R propanediol utilization protein PduL-like protein complement(2247357..2248007) Clostridium botulinum A str. ATCC 3502 5186362 YP_001254604.1 CDS eutE NC_009495.1 2248007 2249605 R acetaldehyde dehydrogenase complement(2248007..2249605) Clostridium botulinum A str. ATCC 3502 5186363 YP_001254605.1 CDS CBO2109 NC_009495.1 2249640 2250437 R propanediol/ethanolamine utilization protein complement(2249640..2250437) Clostridium botulinum A str. ATCC 3502 5186364 YP_001254606.1 CDS eutQ NC_009495.1 2250458 2251120 R ethanolamine utilization protein EutQ-like protein complement(2250458..2251120) Clostridium botulinum A str. ATCC 3502 5186365 YP_001254607.1 CDS eutN NC_009495.1 2251319 2251582 R polyhedral organelle formation protein complement(2251319..2251582) Clostridium botulinum A str. ATCC 3502 5186366 YP_001254608.1 CDS CBO2112 NC_009495.1 2251579 2251881 R hypothetical protein complement(2251579..2251881) Clostridium botulinum A str. ATCC 3502 5186367 YP_001254609.1 CDS eutJ NC_009495.1 2251959 2252804 R ethanolamine utilization protein EutJ family protein complement(2251959..2252804) Clostridium botulinum A str. ATCC 3502 5186368 YP_001254610.1 CDS eutT NC_009495.1 2252786 2253514 R hypothetical protein complement(2252786..2253514) Clostridium botulinum A str. ATCC 3502 5186369 YP_001254611.1 CDS eutP NC_009495.1 2253521 2253949 R GTP-binding protein, EutP/PduV family complement(2253521..2253949) Clostridium botulinum A str. ATCC 3502 5186370 YP_001254612.1 CDS eutS NC_009495.1 2253964 2254317 R ethanolamine utilization protein EutS-like protein complement(2253964..2254317) Clostridium botulinum A str. ATCC 3502 5186371 YP_001254613.1 CDS CBO2117 NC_009495.1 2254357 2255319 R glycyl-radical activating family protein complement(2254357..2255319) Clostridium botulinum A str. ATCC 3502 5186372 YP_001254614.1 CDS CBO2118 NC_009495.1 2255474 2258014 R formate acetyltransferase complement(2255474..2258014) Clostridium botulinum A str. ATCC 3502 5186373 YP_001254615.1 CDS CBO2119 NC_009495.1 2258064 2259557 R aldehyde dehydrogenase complement(2258064..2259557) Clostridium botulinum A str. ATCC 3502 5186374 YP_001254616.1 CDS pduA1 NC_009495.1 2259595 2259903 R microcompartments family protein complement(2259595..2259903) Clostridium botulinum A str. ATCC 3502 5186375 YP_001254617.1 CDS pduA2 NC_009495.1 2259927 2260223 R microcompartments family protein complement(2259927..2260223) Clostridium botulinum A str. ATCC 3502 5186376 YP_001254618.1 CDS CBO2122 NC_009495.1 2260296 2260448 R hypothetical protein complement(2260296..2260448) Clostridium botulinum A str. ATCC 3502 5186377 YP_001254619.1 CDS CBO2123 NC_009495.1 2260527 2260793 R hypothetical protein complement(2260527..2260793) Clostridium botulinum A str. ATCC 3502 5186378 YP_001254620.1 CDS CBO2124 NC_009495.1 2260780 2261892 R hypothetical protein complement(2260780..2261892) Clostridium botulinum A str. ATCC 3502 5186379 YP_001254621.1 CDS CBO2125 NC_009495.1 2262378 2263208 R MerR family transcriptional regulator complement(2262378..2263208) Clostridium botulinum A str. ATCC 3502 5186380 YP_001254622.1 CDS CBO2126 NC_009495.1 2263325 2264467 R iron-containing alcohol dehydrogenase complement(2263325..2264467) Clostridium botulinum A str. ATCC 3502 5186381 YP_001254623.1 CDS CBO2127 NC_009495.1 2264980 2266281 D transmembrane MATE family transporter protein 2264980..2266281 Clostridium botulinum A str. ATCC 3502 5186382 YP_001254624.1 CDS CBO2128 NC_009495.1 2266427 2267374 D MarR family transcriptional regulator 2266427..2267374 Clostridium botulinum A str. ATCC 3502 5186383 YP_001254625.1 CDS CBO2129 NC_009495.1 2267492 2268022 R Similar to the C-terminus from codon 90 of Bacillus cereus hypothetical protein bc2817 SWALL:Q81CF2 (EMBL:AE017007) (262 aa) fasta scores: E(): 1.9e-31,52.02 38d in 173 aa. Possible gene remnant; hypothetical protein complement(2267492..2268022) Clostridium botulinum A str. ATCC 3502 5186384 YP_001254626.1 CDS CBO2129A NC_009495.1 2268026 2268151 R hypothetical protein complement(2268026..2268151) Clostridium botulinum A str. ATCC 3502 5204278 YP_001254627.1 CDS CBO2130 NC_009495.1 2268142 2268930 R hypothetical protein complement(2268142..2268930) Clostridium botulinum A str. ATCC 3502 5186385 YP_001254628.1 CDS CBO2131 NC_009495.1 2269735 2270097 R hypothetical protein complement(2269735..2270097) Clostridium botulinum A str. ATCC 3502 5186386 YP_001254629.1 CDS CBO2132 NC_009495.1 2270110 2270598 R DNA binding protein, excisionase complement(2270110..2270598) Clostridium botulinum A str. ATCC 3502 5186387 YP_001254630.1 CDS CBO2133 NC_009495.1 2270880 2271494 R sortase complement(2270880..2271494) Clostridium botulinum A str. ATCC 3502 5186388 YP_001254631.1 CDS CBO2134 NC_009495.1 2271487 2274162 R Codons 498 to 620 are similar to the N-terminus to codon 124 of Methanobacterium thermoautotrophicum protein mth1478 SWALL:O27522 (EMBL:AE000908) (154 aa) fasta scores: E(): 0.0068, 26.82 38d in 123 aa; hypothetical protein complement(2271487..2274162) Clostridium botulinum A str. ATCC 3502 5186389 YP_001254632.1 CDS CBO2135 NC_009495.1 2274479 2275498 R sensor histidine kinase complement(2274479..2275498) Clostridium botulinum A str. ATCC 3502 5186390 YP_001254633.1 CDS CBO2136 NC_009495.1 2275495 2276166 R DNA-binding response regulator complement(2275495..2276166) Clostridium botulinum A str. ATCC 3502 5186391 YP_001254634.1 CDS CBO2137 NC_009495.1 2276364 2277074 R CDS overlaps CBO2138 8 nt at the N-terminus; hypothetical protein complement(2276364..2277074) Clostridium botulinum A str. ATCC 3502 5186392 YP_001254635.1 CDS CBO2138 NC_009495.1 2277067 2279292 R N-terminus to codon 245 is similar to Clostridium tetani hypothetical protein ctc00646 SWALL:Q897T1 (EMBL:AE015938) (234 aa) fasta scores: E(): 0.023, 21.75 id in 216 aa, and the C-terminus from codon 245 is similar to Thermoanaerobacter tengcongensis aminopeptidase N PepN or tte2694 SWALL:Q8R6U0 (EMBL:AE013209) (479 aa) fasta scores: E(): 0.0027, 21.49 38d in 507 aa. CDS overlaps CBO2137 8 nt at the C-terminus; hypothetical protein complement(2277067..2279292) Clostridium botulinum A str. ATCC 3502 5186393 YP_001254636.1 CDS CBO2139 NC_009495.1 2279295 2280170 R ABC transporter ATP-binding protein complement(2279295..2280170) Clostridium botulinum A str. ATCC 3502 5186394 YP_001254637.1 CDS CBO2140 NC_009495.1 2280230 2282233 R ABC transporter permease complement(2280230..2282233) Clostridium botulinum A str. ATCC 3502 5186395 YP_001254638.1 CDS CBO2141 NC_009495.1 2282532 2283617 R FAD/NAD(P)-binding domain; oxidoreductase complement(2282532..2283617) Clostridium botulinum A str. ATCC 3502 5186396 YP_001254639.1 CDS CBO2142 NC_009495.1 2283872 2284363 R hypothetical protein complement(2283872..2284363) Clostridium botulinum A str. ATCC 3502 5186397 YP_001254640.1 CDS CBO2143 NC_009495.1 2284815 2285837 R oxidoreductase, zinc-binding dehydrogenase complement(2284815..2285837) Clostridium botulinum A str. ATCC 3502 5186398 YP_001254641.1 CDS CBO2144 NC_009495.1 2285922 2286779 R AP endonuclease, family 2 complement(2285922..2286779) Clostridium botulinum A str. ATCC 3502 5186399 YP_001254642.1 CDS aroB NC_009495.1 2286863 2288002 R 3-dehydroquinate synthase complement(2286863..2288002) Clostridium botulinum A str. ATCC 3502 5186400 YP_001254643.1 CDS CBO2146 NC_009495.1 2288568 2290571 R CDS overlaps 20 nt at the N-terminus with CBO2147; ABC transporter permease complement(2288568..2290571) Clostridium botulinum A str. ATCC 3502 5186401 YP_001254644.1 CDS CBO2147 NC_009495.1 2290552 2291319 R CDS overlaps 20 nt at the C-terminus with CBO2146; ABC transporter ATP-binding protein complement(2290552..2291319) Clostridium botulinum A str. ATCC 3502 5186402 YP_001254645.1 CDS CBO2148 NC_009495.1 2292105 2292458 R hypothetical protein complement(2292105..2292458) Clostridium botulinum A str. ATCC 3502 5186403 YP_001254646.1 CDS CBO2149 NC_009495.1 2292784 2294877 R PRD domain-containing protein/PTS system, L-ascorbate family, IIA component complement(2292784..2294877) Clostridium botulinum A str. ATCC 3502 5186404 YP_001254647.1 CDS ulaA NC_009495.1 2295089 2296453 R membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC complement(2295089..2296453) Clostridium botulinum A str. ATCC 3502 5186405 YP_001254648.1 CDS CBO2151 NC_009495.1 2296466 2296750 R PTS system L-ascorbate family transporter subunit IIB complement(2296466..2296750) Clostridium botulinum A str. ATCC 3502 5186406 YP_001254649.1 CDS CBO2152 NC_009495.1 2296779 2297216 R PTS system L-ascorbate family transporter subunit IIA complement(2296779..2297216) Clostridium botulinum A str. ATCC 3502 5187303 YP_001254650.1 CDS CBO2153 NC_009495.1 2297240 2297956 R similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase complement(2297240..2297956) Clostridium botulinum A str. ATCC 3502 5186408 YP_001254651.1 CDS CBO2154 NC_009495.1 2298191 2298595 R Poor database matches. Similar to the C-terminal region of Fusobacterium nucleatum subsp. vincentii ATCC 49256 hypothetical membrane spanning protein FNV1140 SWALL:EAA24128 (EMBL:AABF01000053) (383 aa) fasta scores: E(): 0.47, 32.63 38d in 144 aa; hypothetical protein complement(2298191..2298595) Clostridium botulinum A str. ATCC 3502 5187171 YP_001254652.1 CDS CBO2155 NC_009495.1 2298933 2299667 R . Contains coiled-coiled domain, residues 96 to 165; hypothetical protein complement(2298933..2299667) Clostridium botulinum A str. ATCC 3502 5187287 YP_001254653.1 CDS CBO2156 NC_009495.1 2300007 2300600 R hypothetical protein complement(2300007..2300600) Clostridium botulinum A str. ATCC 3502 5187300 YP_001254654.1 CDS CBO2157 NC_009495.1 2301428 2301916 D Weakly similar to the N-terminal region of Clostridium perfringens probable amino acid ABC transporter cpe2093 SWALL:Q8XIM2 (EMBL:AP003192) (502 aa) fasta scores: E(): 3.1, 26.22 38d in 164 aa; lipoprotein 2301428..2301916 Clostridium botulinum A str. ATCC 3502 5187130 YP_001254655.1 CDS CBO2158 NC_009495.1 2302699 2303193 R hypothetical protein complement(2302699..2303193) Clostridium botulinum A str. ATCC 3502 5186413 YP_001254656.1 CDS lacA NC_009495.1 2303236 2303850 R O-acetyltransferase complement(2303236..2303850) Clostridium botulinum A str. ATCC 3502 5186414 YP_001254657.1 CDS CBO2162 NC_009495.1 2304858 2306264 D proton-dependent oligopeptide family transport protein 2304858..2306264 Clostridium botulinum A str. ATCC 3502 5186417 YP_001254658.1 CDS CBO2163 NC_009495.1 2306367 2307107 R hypothetical protein complement(2306367..2307107) Clostridium botulinum A str. ATCC 3502 5186418 YP_001254659.1 CDS CBO2164 NC_009495.1 2307114 2308004 R N-terminal region is similar to Escherichia coli,Escherichia coli O6, and Escherichia coli O157:H7 regulatory protein SoxS or b4062 or c5053 or z5661 or ecs5044 SWALL:SOXS_ECOLI (SWALL:P22539) (106 aa) fasta scores: E(): 7.2e-08, 32.07 38d in 106 aa. Full length CDS is similar to Clostridium tetani transcriptional regulatory protein ctc01432 SWALL:Q894V2 (EMBL:AE015941) (295 aa) fasta scores: E(): 1.9e-78, 64.4 38d in 295 aa; AraC family transcriptional regulator complement(2307114..2308004) Clostridium botulinum A str. ATCC 3502 5187550 YP_001254660.1 CDS CBO2165 NC_009495.1 2308305 2308826 D Similar to the N-terminal region of Bacillus cereus hypothetical protein bc2906 SWALL:Q81C73 (EMBL:AE017007) (197 aa) fasta scores: E(): 1.3e-05, 30.28 38d in 175 aa; hypothetical protein 2308305..2308826 Clostridium botulinum A str. ATCC 3502 5186420 YP_001254661.1 CDS fldZ NC_009495.1 2310725 2312722 R This enzyme was purified from C. sporogenes and its N-terminus sequenced (Dickert et al. 2000 Eur. J. Biochem. 267, 3874-3884.; 2-enoate reductase complement(2310725..2312722) Clostridium botulinum A str. ATCC 3502 5187703 YP_001254662.1 CDS CBO2167 NC_009495.1 2312819 2313616 R MerR family transcriptional regulator complement(2312819..2313616) Clostridium botulinum A str. ATCC 3502 5186422 YP_001254663.1 CDS CBO2168 NC_009495.1 2313664 2313966 R hypothetical protein complement(2313664..2313966) Clostridium botulinum A str. ATCC 3502 5186423 YP_001254664.1 CDS CBO2169 NC_009495.1 2313971 2314111 R hypothetical protein complement(2313971..2314111) Clostridium botulinum A str. ATCC 3502 5186424 YP_001254665.1 CDS CBO2170 NC_009495.1 2314149 2314487 R hypothetical protein complement(2314149..2314487) Clostridium botulinum A str. ATCC 3502 5187400 YP_001254666.1 CDS CBO2171 NC_009495.1 2314499 2315392 R Weakly similar to Porphyromonas gingivalis CRISPR-associated protein, TM1791 family PG1983 SWALL:AAQ66956 (EMBL:AE017178) (253 aa) fasta scores: E(): 3.4e-08, 34.85 38d in 307 aa; hypothetical protein complement(2314499..2315392) Clostridium botulinum A str. ATCC 3502 5186426 YP_001254667.1 CDS CBO2172 NC_009495.1 2315404 2315838 R hypothetical protein complement(2315404..2315838) Clostridium botulinum A str. ATCC 3502 5186427 YP_001254668.1 CDS CBO2173 NC_009495.1 2315866 2316705 R hypothetical protein complement(2315866..2316705) Clostridium botulinum A str. ATCC 3502 5186428 YP_001254669.1 CDS CBO2174 NC_009495.1 2316717 2317916 R hypothetical protein complement(2316717..2317916) Clostridium botulinum A str. ATCC 3502 5186429 YP_001254670.1 CDS CBO2175 NC_009495.1 2317933 2319645 R Poor database matches. C-terminal region is weakly similar to the N-terminus of Archaeoglobus fulgidus hypothetical protein Af1867 SWALL:O28412 (EMBL:AE000974) (1004 aa) fasta scores: E(): 1.1e-05, 25.3 38d in 486 aa; hypothetical protein complement(2317933..2319645) Clostridium botulinum A str. ATCC 3502 5186430 YP_001254671.1 CDS CBO2176 NC_009495.1 2319646 2320833 R Poor database matches. Weakly similar to Porphyromonas gingivalis hypothetical protein PG1988 SWALL:AAQ66961 (EMBL:AE017178) (480 aa) fasta scores: E(): 0.076, 25.52 38d in 474 aa; hypothetical protein complement(2319646..2320833) Clostridium botulinum A str. ATCC 3502 5187325 YP_001254672.1 CDS CBO2177 NC_009495.1 2320846 2322549 R hypothetical protein complement(2320846..2322549) Clostridium botulinum A str. ATCC 3502 5186432 YP_001254673.1 CDS CBO2178 NC_009495.1 2322601 2322975 R hypothetical protein complement(2322601..2322975) Clostridium botulinum A str. ATCC 3502 5186433 YP_001254674.1 CDS CBO2179 NC_009495.1 2322995 2323684 R CRISPR-associated Cas family protein complement(2322995..2323684) Clostridium botulinum A str. ATCC 3502 5186434 YP_001254675.1 CDS CBO2180 NC_009495.1 2324477 2324650 D Doubtful CDS.; hypothetical protein 2324477..2324650 Clostridium botulinum A str. ATCC 3502 5186435 YP_001254676.1 CDS CBO2181 NC_009495.1 2325423 2327078 R Similar to Clostridium tetani protein CTC01470 SWALL:Q894R5 (EMBL:AE015941) (528 aa) fasta scores: E(): 2.2e-101, 79.85 38d in 551 aa. CDS contains additional internal amino acids relative to other proteins, residues 189 to 211; hypothetical protein complement(2325423..2327078) Clostridium botulinum A str. ATCC 3502 5186436 YP_001254677.1 CDS CBO2182 NC_009495.1 2327855 2328703 R Highly similar to CBO0844 (98.2 38d); hypothetical protein complement(2327855..2328703) Clostridium botulinum A str. ATCC 3502 5187358 YP_001254678.1 CDS CBO2183 NC_009495.1 2328994 2329914 R phenazine biosynthesis protein, PhzF family complement(2328994..2329914) Clostridium botulinum A str. ATCC 3502 5186438 YP_001254679.1 CDS CBO2184 NC_009495.1 2330238 2331731 D GntR family transcriptional regulator 2330238..2331731 Clostridium botulinum A str. ATCC 3502 5186439 YP_001254680.1 CDS CBO2185 NC_009495.1 2332656 2333111 D Similar to the N-terminal region of Clostridium perfringens hypothetical protein CPE2586 SWALL:Q8XH99 (EMBL:AP003194) (262 aa) fasta scores: E(): 5.5e-26, 53.1 id in 145 aa. Possible gene remnant; hypothetical protein 2332656..2333111 Clostridium botulinum A str. ATCC 3502 5186440 YP_001254681.1 CDS CBO2186 NC_009495.1 2333191 2333658 R N-terminus is similar to the N-terminal region of Clostridium perfringens hypothetical protein CPE0727 SWALL:Q8XMG2 (EMBL:AP003187) (268 aa) fasta scores: E(): 2.8e-10, 65.15 38d in 66 aa. Possible gene remnant; DNA-binding protein complement(2333191..2333658) Clostridium botulinum A str. ATCC 3502 5186441 YP_001254682.1 CDS CBO2187 NC_009495.1 2333826 2334857 R C-terminus is similar to the C-terminal region of Escherichia coli acetyl esterase Aes or b0476 SWALL:AES_ECOLI (SWALL:P23872) (319 aa) fasta scores: E(): 9.8e-14, 26.78 38d in 280 aa; lipase/esterase complement(2333826..2334857) Clostridium botulinum A str. ATCC 3502 5186442 YP_001254683.1 CDS CBO2188 NC_009495.1 2335123 2336475 R amidohydrolase complement(2335123..2336475) Clostridium botulinum A str. ATCC 3502 5187410 YP_001254684.1 CDS CBO2189 NC_009495.1 2336684 2338027 R uric acid permease complement(2336684..2338027) Clostridium botulinum A str. ATCC 3502 5186444 YP_001254685.1 CDS CBO2190 NC_009495.1 2338463 2339362 D hypothetical protein 2338463..2339362 Clostridium botulinum A str. ATCC 3502 5187337 YP_001254686.1 CDS CBO2191 NC_009495.1 2339703 2341022 D amino acid permease 2339703..2341022 Clostridium botulinum A str. ATCC 3502 5186446 YP_001254687.1 CDS hadI NC_009495.1 2341301 2342074 R activator of 2-hydroxyisocaproyl-CoA dehydratase complement(2341301..2342074) Clostridium botulinum A str. ATCC 3502 5187688 YP_001254688.1 CDS CBO2193 NC_009495.1 2342151 2343782 R CDS is extended at the C-terminus in comparison to similar proteins. N-terminal region is similar to Pyrococcus horikoshii hypothetical protein PH0137 SWALL:O57877 (EMBL:AP000001) (378 aa) fasta scores: E(): 6.4e-17, 26.5 38d in 381 aa; hypothetical protein complement(2342151..2343782) Clostridium botulinum A str. ATCC 3502 5187166 YP_001254689.1 CDS etfA1 NC_009495.1 2344083 2345132 R electron transfer flavoprotein subunit alpha complement(2344083..2345132) Clostridium botulinum A str. ATCC 3502 5186449 YP_001254690.1 CDS etfB1 NC_009495.1 2345151 2345936 R electron transfer flavoprotein subunit beta complement(2345151..2345936) Clostridium botulinum A str. ATCC 3502 5186450 YP_001254691.1 CDS acdB NC_009495.1 2345975 2347108 R acyl-CoA dehydrogenase complement(2345975..2347108) Clostridium botulinum A str. ATCC 3502 5186451 YP_001254692.1 CDS hadC NC_009495.1 2347373 2348500 R subunit of oxygen-sensitive 2-hydroxyisocaproyl-CoA dehydratase complement(2347373..2348500) Clostridium botulinum A str. ATCC 3502 5186452 YP_001254693.1 CDS hadB NC_009495.1 2348500 2349732 R Similar to Acidaminococcus fermentans (R)-2-hydroxyglutaryl-CoA dehydratase alpha-subunit HgdA SWALL:HGDA_ACIFE (SWALL:P11569) (476 aa) fasta scores: E(): 1e-53, 39.91 38d in 471 aa. CDS contains internal deletion in comparison to the A. fermentans protein. Full length CDS is similar to Clostridium sporogenes r-phenyllactate dehydratase medium subunit FldB SWALL:Q93AL9 (EMBL:AF420489) (407 aa) fasta scores: E(): 1.7e-84, 51.47 38d in 408 aa; subunit of oxygen-sensitive 2-hydroxyisocaproyl-CoA dehydratase complement(2348500..2349732) Clostridium botulinum A str. ATCC 3502 5187364 YP_001254694.1 CDS hadA NC_009495.1 2349795 2351009 R this gene from C. difficile was cloned,overexpressed in E. coli, and characterized as 2-hydroxyisocaproate CoA-transferase, a class III enzyme (Kim et al. 2004. FEMS Microbiol. Rev. 28, 455-468); isocaprenoyl-CoA:2-hydroxyisocaproate CoA-transferase complement(2349795..2351009) Clostridium botulinum A str. ATCC 3502 5186454 YP_001254695.1 CDS fesA NC_009495.1 2351753 2352574 R ferredoxin complement(2351753..2352574) Clostridium botulinum A str. ATCC 3502 5186455 YP_001254696.1 CDS CBO2201 NC_009495.1 2353126 2354397 D 2-hydroxyacyl-CoA dehydratase,D-component 2353126..2354397 Clostridium botulinum A str. ATCC 3502 5186456 YP_001254697.1 CDS CBO2202 NC_009495.1 2354400 2356094 D Similar over its N-terminal region to small subunits of 2-hydroxyacyl-CoA dehydratases (hadC, HgdB and FldC), and over its C-terminal region to activators of 2-hydroxyacyl-CoA dehydratases (HadI, hgdC and FldI). Possible bifunctional fusion protein; bifunctional 2-hydroxyacyl-CoA dehydratase/activator domain-containing protein 2354400..2356094 Clostridium botulinum A str. ATCC 3502 5187570 YP_001254698.1 CDS CBO2203 NC_009495.1 2356393 2357544 R methyl-accepting chemotaxis protein complement(2356393..2357544) Clostridium botulinum A str. ATCC 3502 5186458 YP_001254699.1 CDS CBO2204 NC_009495.1 2358145 2358744 R hypothetical protein complement(2358145..2358744) Clostridium botulinum A str. ATCC 3502 5186459 YP_001254700.1 CDS CBO2205 NC_009495.1 2359158 2359751 R acetyltransferase (GNAT) family protein complement(2359158..2359751) Clostridium botulinum A str. ATCC 3502 5187204 YP_001254701.1 CDS CBO2207 NC_009495.1 2360676 2362064 R gluconate permease complement(2360676..2362064) Clostridium botulinum A str. ATCC 3502 5187691 YP_001254702.1 CDS pdxA NC_009495.1 2362291 2363295 R catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase complement(2362291..2363295) Clostridium botulinum A str. ATCC 3502 5186463 YP_001254703.1 CDS CBO2209 NC_009495.1 2363308 2364645 R hypothetical protein complement(2363308..2364645) Clostridium botulinum A str. ATCC 3502 5186464 YP_001254704.1 CDS CBO2210 NC_009495.1 2364710 2365468 R DeoR family regulatory proteins complement(2364710..2365468) Clostridium botulinum A str. ATCC 3502 5186465 YP_001254705.1 CDS CBO2211 NC_009495.1 2366045 2366938 R protease complement(2366045..2366938) Clostridium botulinum A str. ATCC 3502 5187476 YP_001254706.1 CDS CBO2212 NC_009495.1 2367353 2368738 D exported protein 2367353..2368738 Clostridium botulinum A str. ATCC 3502 5186467 YP_001254707.1 CDS CBO2213 NC_009495.1 2369183 2369776 R TetR family transcriptional regulator complement(2369183..2369776) Clostridium botulinum A str. ATCC 3502 5186468 YP_001254708.1 CDS CBO2214 NC_009495.1 2369920 2370447 D hypothetical protein 2369920..2370447 Clostridium botulinum A str. ATCC 3502 5186469 YP_001254709.1 CDS CBO2215 NC_009495.1 2370589 2371239 D hypothetical protein 2370589..2371239 Clostridium botulinum A str. ATCC 3502 5186470 YP_001254710.1 CDS CBO2216 NC_009495.1 2371505 2373967 D to the full length CDS. N-terminal region is similar to Clostridium tetani protein CTC01609 SWALL:Q894D9 (EMBL:AE015941) (307 aa) fasta scores: E(): 3.3e-70, 62.58 38d in 310 aa. C-terminal region is similar to Bacteroides thetaiotaomicron hypothetical protein BT2193 SWALL:Q8A5P5 (EMBL:AE016935) (557 aa) fasta scores: E(): 1.3e-47,32.73 38d in 498 aa. Possible bifunctional protein; exported protein 2371505..2373967 Clostridium botulinum A str. ATCC 3502 5186471 YP_001254711.1 CDS CBO2217 NC_009495.1 2374038 2375111 R zinc-binding alcohol dehydrogenase complement(2374038..2375111) Clostridium botulinum A str. ATCC 3502 5186472 YP_001254712.1 CDS CBO2218 NC_009495.1 2375560 2377524 R carbon monoxide dehydrogenase subunit beta complement(2375560..2377524) Clostridium botulinum A str. ATCC 3502 5187560 YP_001254713.1 CDS CBO2219 NC_009495.1 2378179 2378520 D hydrogenase nickel incorporation protein 2378179..2378520 Clostridium botulinum A str. ATCC 3502 5186474 YP_001254714.1 CDS CBO2220 NC_009495.1 2378523 2379161 D Similar to the C-terminal region of Escherichia coli, and Escherichia coli O6 hydrogenase isoenzymes nickel incorporation protein HypB or b2727 or c3287 SWALL:HYPB_ECOLI (SWALL:P24190) (290 aa) fasta scores: E(): 3e-25, 42.99 38d in 207 aa. Similar to the full length Thermoanaerobacter tengcongensis Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase TTE0130 SWALL:Q8RDB1 (EMBL:AE012986) (218 aa) fasta scores: E(): 5.2e-25,44.66 38d in 206 aa; hydrogenase isoenzyme nickel incorporation protein 2378523..2379161 Clostridium botulinum A str. ATCC 3502 5186475 YP_001254715.1 CDS CBO2221 NC_009495.1 2379184 2379540 R nitrogenase iron-molybdenum cofactor protein complement(2379184..2379540) Clostridium botulinum A str. ATCC 3502 5187561 YP_001254716.1 CDS CBO2222 NC_009495.1 2379636 2380481 R (4Fe-4S)-binding protein complement(2379636..2380481) Clostridium botulinum A str. ATCC 3502 5186477 YP_001254717.1 CDS CBO2223 NC_009495.1 2380472 2381302 R (4Fe-4S)-binding protein complement(2380472..2381302) Clostridium botulinum A str. ATCC 3502 5186478 YP_001254718.1 CDS CBO2224 NC_009495.1 2381327 2381686 R dinitrogenase iron-molybdenum cofactor family protein complement(2381327..2381686) Clostridium botulinum A str. ATCC 3502 5186479 YP_001254719.1 CDS CBO2225 NC_009495.1 2382275 2382652 R hypothetical protein complement(2382275..2382652) Clostridium botulinum A str. ATCC 3502 5186480 YP_001254720.1 CDS CBO2226 NC_009495.1 2382948 2383712 R chemotaxis protein MotB complement(2382948..2383712) Clostridium botulinum A str. ATCC 3502 5187376 YP_001254721.1 CDS CBO2227 NC_009495.1 2383730 2384515 R With Mot B forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.; flagellar motor protein MotA complement(2383730..2384515) Clostridium botulinum A str. ATCC 3502 5187177 YP_001254722.1 CDS CBO2228 NC_009495.1 2385204 2386820 R to the full length CDS. N-terminus is similar to the N-terminal regions of Bacillus subtilis N-acetylmuramoyl-L-alanine amidase cwlB precursor LytC or CwlB or bsu35620 SWALL:CWLB_BACSU (SWALL:Q02114) (496 aa) fasta scores: E(): 4.4e-06, 33.92 id in 336 aa, and Clostridium tetani S-layer protein/internalin A-like/N-acetylmuramoyl-L-alanine amidase ctc00696 SWALL:Q897N6 (EMBL:AE015938) (518 aa) fasta scores: E(): 5.4e-60, 49.18 38d in 370 aa; amidase domain protein complement(2385204..2386820) Clostridium botulinum A str. ATCC 3502 5186483 YP_001254723.1 CDS CBO2229 NC_009495.1 2387131 2387754 R Also similar to CBO1656 (57.84 38d); hypothetical protein complement(2387131..2387754) Clostridium botulinum A str. ATCC 3502 5186484 YP_001254724.1 CDS CBO2230 NC_009495.1 2388034 2388375 R hypothetical protein complement(2388034..2388375) Clostridium botulinum A str. ATCC 3502 5186485 YP_001254725.1 CDS CBO2231 NC_009495.1 2388381 2390336 R oligopeptide transporter OPT family complement(2388381..2390336) Clostridium botulinum A str. ATCC 3502 5186486 YP_001254726.1 CDS CBO2232 NC_009495.1 2390454 2391902 R aminoacyl-histidine dipeptidase complement(2390454..2391902) Clostridium botulinum A str. ATCC 3502 5186487 YP_001254727.1 CDS CBO2233 NC_009495.1 2392460 2393488 R low specificity L-threonine aldolase complement(2392460..2393488) Clostridium botulinum A str. ATCC 3502 5186488 YP_001254728.1 CDS CBO2235 NC_009495.1 2394326 2395468 R glycerate kinase complement(2394326..2395468) Clostridium botulinum A str. ATCC 3502 5186490 YP_001254729.1 CDS CBO2236 NC_009495.1 2396107 2396904 D Weakly similar to the C-terminal region of Rattus norvegicus D-beta-hydroxybutyrate dehydrogenase,mitochondrial precursor BDH SWALL:BDH_RAT (SWALL:P29147) (344 aa) fasta scores: E(): 3.1e-09, 25.65 38d in 269 aa. Similar to the full length Pseudomonas aeruginosa probable short-chain dehydrogenase PA1330 SWALL:Q9I414 (EMBL:AE004562) (259 aa) fasta scores: E(): 5.4e-22,33.85 38d in 254 aa; oxidoreductase, short chain dehydrogenase/reductase 2396107..2396904 Clostridium botulinum A str. ATCC 3502 5186491 YP_001254730.1 CDS CBO2238 NC_009495.1 2397426 2398604 R sodium extrusion protein NatB complement(2397426..2398604) Clostridium botulinum A str. ATCC 3502 5187120 YP_001254731.1 CDS CBO2239 NC_009495.1 2398618 2399337 R sodium extrusion ATP-binding protein NatA complement(2398618..2399337) Clostridium botulinum A str. ATCC 3502 5186494 YP_001254732.1 CDS CBO2240 NC_009495.1 2399793 2400242 R GNAT family acetyltransferase complement(2399793..2400242) Clostridium botulinum A str. ATCC 3502 5186495 YP_001254733.1 CDS CBO2241 NC_009495.1 2400256 2400720 R MarR family transcriptional regulator complement(2400256..2400720) Clostridium botulinum A str. ATCC 3502 5186496 YP_001254734.1 CDS CBO2242 NC_009495.1 2401413 2401817 R hypothetical protein complement(2401413..2401817) Clostridium botulinum A str. ATCC 3502 5186497 YP_001254735.1 CDS CBO2243 NC_009495.1 2401913 2402983 R uroporphyrinogen decarboxylase complement(2401913..2402983) Clostridium botulinum A str. ATCC 3502 5187613 YP_001254736.1 CDS CBO2244 NC_009495.1 2403331 2404779 R oxidoreductase, FAD/[2Fe-2S]-binding complement(2403331..2404779) Clostridium botulinum A str. ATCC 3502 5187509 YP_001254737.1 CDS CBO2245 NC_009495.1 2405127 2405945 D MerR family transcriptional regulator 2405127..2405945 Clostridium botulinum A str. ATCC 3502 5187510 YP_001254738.1 CDS CBO2246 NC_009495.1 2406153 2407556 R amino acid permease complement(2406153..2407556) Clostridium botulinum A str. ATCC 3502 5188003 YP_001254739.1 CDS CBO2247 NC_009495.1 2407994 2408536 R hypothetical protein complement(2407994..2408536) Clostridium botulinum A str. ATCC 3502 5186502 YP_001254740.1 CDS CBO2248 NC_009495.1 2408918 2409175 R hypothetical protein complement(2408918..2409175) Clostridium botulinum A str. ATCC 3502 5186503 YP_001254741.1 CDS CBO2249 NC_009495.1 2409535 2409660 D hypothetical protein 2409535..2409660 Clostridium botulinum A str. ATCC 3502 5186504 YP_001254742.1 CDS CBO2250 NC_009495.1 2409679 2410110 D MarR family transcriptional regulator 2409679..2410110 Clostridium botulinum A str. ATCC 3502 5186505 YP_001254743.1 CDS CBO2251 NC_009495.1 2410113 2410505 D hypothetical protein 2410113..2410505 Clostridium botulinum A str. ATCC 3502 5187225 YP_001254744.1 CDS CBO2253 NC_009495.1 2411171 2412001 R hydroxyethylthiazole kinase complement(2411171..2412001) Clostridium botulinum A str. ATCC 3502 5186508 YP_001254745.1 CDS CBO2254 NC_009495.1 2411946 2412515 R Similar to Enterococcus faecalis hypothetical protein EF2778 SWALL:Q830K3 (EMBL:AE016955) (176 aa) fasta scores: E(): 1.1e-25, 46.62 38d in 178 aa, and to Streptococcus pneumoniae domain protein SP0723 SWALL:Q97RS0 (EMBL:AE007380) (174 aa) fasta scores: E(): 1.1e-22, 44.57 38d in 166 aa. CDS is extended at the C-terminus in comparison to orthologues. CDS feature contains an long overlap with the downstream CDS (CBO2253). Possible frameshift mutation after codon 158; thiW protein complement(2411946..2412515) Clostridium botulinum A str. ATCC 3502 5186509 YP_001254746.1 CDS CBO2255 NC_009495.1 2412958 2413395 R GNAT family acetyltransferase complement(2412958..2413395) Clostridium botulinum A str. ATCC 3502 5186510 YP_001254747.1 CDS CBO2256 NC_009495.1 2413523 2414251 R metallo-beta-lactamase complement(2413523..2414251) Clostridium botulinum A str. ATCC 3502 5186511 YP_001254748.1 CDS CBO2257 NC_009495.1 2414436 2414708 R hypothetical protein complement(2414436..2414708) Clostridium botulinum A str. ATCC 3502 5186512 YP_001254749.1 CDS bioD NC_009495.1 2414993 2415676 R DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase complement(2414993..2415676) Clostridium botulinum A str. ATCC 3502 5186513 YP_001254750.1 CDS CBO2259 NC_009495.1 2415679 2416635 R biotin synthase complement(2415679..2416635) Clostridium botulinum A str. ATCC 3502 5186514 YP_001254751.1 CDS CBO2260 NC_009495.1 2416628 2417188 R BioY family protein complement(2416628..2417188) Clostridium botulinum A str. ATCC 3502 5186515 YP_001254752.1 CDS CBO2260A NC_009495.1 2417327 2417656 R hypothetical protein complement(2417327..2417656) Clostridium botulinum A str. ATCC 3502 5204279 YP_001254753.1 CDS CBO2261 NC_009495.1 2417644 2418069 R MarR family transcriptional regulator complement(2417644..2418069) Clostridium botulinum A str. ATCC 3502 5186516 YP_001254754.1 CDS CBO2262 NC_009495.1 2418214 2418810 R hypothetical protein complement(2418214..2418810) Clostridium botulinum A str. ATCC 3502 5186517 YP_001254755.1 CDS CBO2263 NC_009495.1 2418988 2420781 D Similar to an internal region of Homo sapiens xaa-Pro aminopeptidase 2 precursor XPNPEP2 SWALL:XPP2_HUMAN (SWALL:O43895) (674 aa) fasta scores: E(): 1.1e-58, 31.58 38d in 611 aa. Similar to full length Clostridium perfringens probable aminopeptidase CPE0872 SWALL:Q8XM18 (EMBL:AP003188) (591 aa) fasta scores: E(): 1.8e-101, 45.22 38d in 597 aa; M24 family metallopeptidase 2418988..2420781 Clostridium botulinum A str. ATCC 3502 5186518 YP_001254756.1 CDS CBO2264 NC_009495.1 2420812 2422209 D oligopeptide transporter 2420812..2422209 Clostridium botulinum A str. ATCC 3502 5186519 YP_001254757.1 CDS CBO2265 NC_009495.1 2422749 2422997 R hypothetical protein complement(2422749..2422997) Clostridium botulinum A str. ATCC 3502 5186520 YP_001254758.1 CDS CBO2266 NC_009495.1 2423261 2423530 R hypothetical protein complement(2423261..2423530) Clostridium botulinum A str. ATCC 3502 5186521 YP_001254759.1 CDS CBO2267 NC_009495.1 2423798 2424130 D Highly similar to CBO1594 (85.5 38d), CBO0900 (85.5 38d) and CBO2273 (82.3 0d).; hypothetical protein 2423798..2424130 Clostridium botulinum A str. ATCC 3502 5187066 YP_001254760.1 CDS CBO2268 NC_009495.1 2424295 2425296 R choloylglycine hydrolase complement(2424295..2425296) Clostridium botulinum A str. ATCC 3502 5186523 YP_001254761.1 CDS CBO2269 NC_009495.1 2425373 2425480 R . Doubtful CDS, poor translational start site; hypothetical protein complement(2425373..2425480) Clostridium botulinum A str. ATCC 3502 5186524 YP_001254762.1 CDS CBO2270 NC_009495.1 2425494 2426075 R N-terminus is similar to the N-terminal region of Clostridium tetani iron-sulfur flavoprotein CTC01006 SWALL:Q896J7 (EMBL:AE015939) (185 aa) fasta scores: E(): 2e-12, 44.18 38d in 129 aa. Weakly similar to the full length Escherichia coli NAD(P)H oxidoreductase b0901 SWALL:YCAK_ECOLI (SWALL:P43340) (196 aa) fasta scores: E(): 0.008, 22.34 38d in 188 aa; hypothetical protein complement(2425494..2426075) Clostridium botulinum A str. ATCC 3502 5186525 YP_001254763.1 CDS CBO2271 NC_009495.1 2426530 2426871 R Doubtful CDS.; hypothetical protein complement(2426530..2426871) Clostridium botulinum A str. ATCC 3502 5186526 YP_001254764.1 CDS CBO2272 NC_009495.1 2427190 2427393 R hypothetical protein complement(2427190..2427393) Clostridium botulinum A str. ATCC 3502 5187671 YP_001254765.1 CDS CBO2273 NC_009495.1 2428207 2428539 D Similar to the N-terminal region of Bacillus subtilis hypothetical protein YmaF or bsu17320 SWALL:YMAF_BACSU (SWALL:O31794) (137 aa) fasta scores: E(): 0.0051, 30.3 38d in 99 aa; Highly similar to CBO0900 (82.3 38d), CBO1594 (85.5 38d) and CBO12267 (89.9 0d); hypothetical protein 2428207..2428539 Clostridium botulinum A str. ATCC 3502 5186528 YP_001254766.1 CDS CBO2274 NC_009495.1 2428981 2429964 D Similar to Clostridium acetobutylicum predicted flavodoxin oxidoreductase CAC1860 SWALL:Q97HZ6 (EMBL:AE007694) (328 aa) fasta scores: E(): 8.3e-70,54.87 38d in 328 aa. C-terminal region is weakly similar to Bacillus subtilis dihydroorotate dehydrogenase electron transfer subunit PyrK or PyrZ or BSU15530 SWALL:PYRK_BACSU (SWALL:P25983) (256 aa) fasta scores: E(): 1.4e-06, 24.47 id in 237 aa; hypothetical protein 2428981..2429964 Clostridium botulinum A str. ATCC 3502 5186529 YP_001254767.1 CDS CBO2275 NC_009495.1 2431078 2431671 R lipoprotein complement(2431078..2431671) Clostridium botulinum A str. ATCC 3502 5186530 YP_001254768.1 CDS CBO2276 NC_009495.1 2431845 2432294 R this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B complement(2431845..2432294) Clostridium botulinum A str. ATCC 3502 5186531 YP_001254769.1 CDS CBO2277 NC_009495.1 2432526 2433122 R Mn/Fe; Mn/Fe superoxide dismutase complement(2432526..2433122) Clostridium botulinum A str. ATCC 3502 5187439 YP_001254770.1 CDS CBO2278 NC_009495.1 2433235 2434980 R ABC transporter ATP-binding transmembrane protein complement(2433235..2434980) Clostridium botulinum A str. ATCC 3502 5186533 YP_001254771.1 CDS CBO2279 NC_009495.1 2434973 2436772 R ABC transporter ATP-binding protein complement(2434973..2436772) Clostridium botulinum A str. ATCC 3502 5187180 YP_001254772.1 CDS CBO2280 NC_009495.1 2437052 2438011 R AraC family transcriptional regulator complement(2437052..2438011) Clostridium botulinum A str. ATCC 3502 5186535 YP_001254773.1 CDS CBO2281 NC_009495.1 2438518 2439252 R C-terminal region is weakly similar to Bacillus licheniformis bacitracin transport permease BcrB SWALL:BCRB_BACLI (SWALL:P42333) (208 aa) fasta scores: E(): 4.2, 20.63 38d in 189 aa. Full length CDS is similar to Clostridium tetani membrane spanning protein CTC01802 SWALL:Q893L6 (EMBL:AE015942) (243 aa) fasta scores: E(): 2.6e-08, 21.77 38d in 248 aa; hypothetical protein complement(2438518..2439252) Clostridium botulinum A str. ATCC 3502 5186536 YP_001254774.1 CDS CBO2282 NC_009495.1 2439288 2440034 R hypothetical protein complement(2439288..2440034) Clostridium botulinum A str. ATCC 3502 5187361 YP_001254775.1 CDS CBO2283 NC_009495.1 2440027 2440947 R antibiotic ABC transporter ATP-binding protein complement(2440027..2440947) Clostridium botulinum A str. ATCC 3502 5186538 YP_001254776.1 CDS CBO2284 NC_009495.1 2441149 2442060 R sensor histidine kinase complement(2441149..2442060) Clostridium botulinum A str. ATCC 3502 5186539 YP_001254777.1 CDS CBO2285 NC_009495.1 2442057 2442764 R DNA-binding response regulator complement(2442057..2442764) Clostridium botulinum A str. ATCC 3502 5186540 YP_001254778.1 CDS CBO2286 NC_009495.1 2443391 2444152 D exonuclease 2443391..2444152 Clostridium botulinum A str. ATCC 3502 5186541 YP_001254779.1 CDS CBO2287 NC_009495.1 2444186 2444488 R stress responsive A/B barrel domain-containing protein complement(2444186..2444488) Clostridium botulinum A str. ATCC 3502 5188017 YP_001254780.1 CDS CBO2288 NC_009495.1 2444571 2445407 R metallo-beta-lactamase complement(2444571..2445407) Clostridium botulinum A str. ATCC 3502 5186543 YP_001254781.1 CDS CBO2289 NC_009495.1 2445710 2446162 R peptide deformylase complement(2445710..2446162) Clostridium botulinum A str. ATCC 3502 5186544 YP_001254782.1 CDS CBO2290 NC_009495.1 2446163 2446402 R DNA-binding protein complement(2446163..2446402) Clostridium botulinum A str. ATCC 3502 5186545 YP_001254783.1 CDS tgl NC_009495.1 2446641 2447462 R involved in assembly of spore coat proteins such as GerQ by catalyzing epsilon-(gamma-glutamyl)lysine cross links; transglutaminase complement(2446641..2447462) Clostridium botulinum A str. ATCC 3502 5187221 YP_001254784.1 CDS CBO2292 NC_009495.1 2447459 2448454 R hypothetical protein complement(2447459..2448454) Clostridium botulinum A str. ATCC 3502 5187634 YP_001254785.1 CDS CBO2293 NC_009495.1 2449194 2450093 D C-terminal region is similar to Bacillus megaterium glucose 1-dehydrogenase III GdhIII SWALL:DHG3_BACME (SWALL:P39484) (261 aa) fasta scores: E(): 2.9e-23, 34.41 id in 247 aa. Full length CDS is similar to Clostridium acetobutylicum predicted dehydrogenase of short-chain alcohol dehydrogenase, ortholog of YhdF B.subtilis CAC1423 SWALL:Q97J63 (EMBL:AE007653) (299 aa) fasta scores: E(): 1.8e-76, 68.7 38d in 294 aa; short chain dehydrogenase 2449194..2450093 Clostridium botulinum A str. ATCC 3502 5186548 YP_001254786.1 CDS CBO2294 NC_009495.1 2450283 2450879 R hypothetical protein complement(2450283..2450879) Clostridium botulinum A str. ATCC 3502 5187114 YP_001254787.1 CDS CBO2295 NC_009495.1 2451555 2452928 D hypothetical protein 2451555..2452928 Clostridium botulinum A str. ATCC 3502 5186550 YP_001254788.1 CDS CBO2296 NC_009495.1 2453130 2453435 R hypothetical protein complement(2453130..2453435) Clostridium botulinum A str. ATCC 3502 5186551 YP_001254789.1 CDS CBO2297 NC_009495.1 2453428 2453952 R hypothetical protein complement(2453428..2453952) Clostridium botulinum A str. ATCC 3502 5187849 YP_001254790.1 CDS CBO2298 NC_009495.1 2453933 2454385 R hypothetical protein complement(2453933..2454385) Clostridium botulinum A str. ATCC 3502 5186553 YP_001254791.1 CDS CBO2299 NC_009495.1 2454382 2454894 R RNA polymerase sigma-70 factor, ECF family complement(2454382..2454894) Clostridium botulinum A str. ATCC 3502 5187784 YP_001254792.1 CDS gerAB4 NC_009495.1 2455348 2456454 R This CDS is also similar to CBO2796 (77.9 38d. in 367 aa overlap), CBO1974 (35.5 38d. in 360 aa overlap),CBO1978 (36.827 38d. in 353 aa overlap) and to CBO1976 (32.682 38d. in 358 aa overlap); spore germination protein complement(2455348..2456454) Clostridium botulinum A str. ATCC 3502 5186555 YP_001254793.1 CDS CBO2302 NC_009495.1 2457769 2459121 R N-terminus is similar to the N-terminal region of Bacillus subtilis poly(A) polymerase PapS or BSU22450 SWALL:PAPS_BACSU (SWALL:P42977) (397 aa) fasta scores: E(): 1.3e-26, 43.05 38d in 216 aa. Full length CDS is similar to Clostridium tetani poly(A) polymerase CTC01205 SWALL:Q895R6 (EMBL:AE015940) (451 aa) fasta scores: E(): 3.5e-79, 50.55 38d in 451 aa; poly(A) polymerase complement(2457769..2459121) Clostridium botulinum A str. ATCC 3502 5187471 YP_001254794.1 CDS CBO2302A NC_009495.1 2459111 2459359 R Similar to the N-terminal region of Clostridium acetobutylicum uncharacterized protein, homolog of YcgL B. subtilis CAC1496 SWALL:Q97IZ0 (EMBL:AE007660) (339 aa) fasta scores: E(): 1.5e-07, 46.34 38d in 82 aa. Probable gene remnant; hypothetical protein complement(2459111..2459359) Clostridium botulinum A str. ATCC 3502 5204280 YP_001254795.1 CDS CBO2303 NC_009495.1 2459536 2459700 R hypothetical protein complement(2459536..2459700) Clostridium botulinum A str. ATCC 3502 5187783 YP_001254796.1 CDS CBO2304 NC_009495.1 2460303 2460635 D PadR family transcriptional regulator 2460303..2460635 Clostridium botulinum A str. ATCC 3502 5186559 YP_001254797.1 CDS CBO2305 NC_009495.1 2460637 2461413 D hypothetical protein 2460637..2461413 Clostridium botulinum A str. ATCC 3502 5186560 YP_001254798.1 CDS CBO2306 NC_009495.1 2461487 2462737 R to the full length CDS. C-terminus is similar to the C-terminal region of Streptococcus pneumoniae, and Streptococcus pneumoniae sensor protein ciah ciah or sp0799 or spr0708 SWALL:CIAH_STRPN (SWALL:Q54955) (444 aa) fasta scores: E(): 1.7e-16, 36.01 38d in 236 aa; sensor histidine kinase complement(2461487..2462737) Clostridium botulinum A str. ATCC 3502 5186561 YP_001254799.1 CDS CBO2307 NC_009495.1 2462730 2463410 R DNA-binding response regulator complement(2462730..2463410) Clostridium botulinum A str. ATCC 3502 5186562 YP_001254800.1 CDS CBO2308 NC_009495.1 2463403 2463942 R ; similar to upstream CDS CBO2309 (31.638 38d); hypothetical protein complement(2463403..2463942) Clostridium botulinum A str. ATCC 3502 5186563 YP_001254801.1 CDS CBO2309 NC_009495.1 2464092 2464634 R ; similar to downstream CDS CBO2308 (31.638 38d); hypothetical protein complement(2464092..2464634) Clostridium botulinum A str. ATCC 3502 5187810 YP_001254802.1 CDS CBO2310 NC_009495.1 2464992 2465804 R hypothetical protein complement(2464992..2465804) Clostridium botulinum A str. ATCC 3502 5186565 YP_001254803.1 CDS CBO2313 NC_009495.1 2466822 2467154 R lipoprotein complement(2466822..2467154) Clostridium botulinum A str. ATCC 3502 5186568 YP_001254804.1 CDS CBO2314 NC_009495.1 2467224 2469554 R hypothetical protein complement(2467224..2469554) Clostridium botulinum A str. ATCC 3502 5187558 YP_001254805.1 CDS CBO2315 NC_009495.1 2469560 2469796 R hypothetical protein complement(2469560..2469796) Clostridium botulinum A str. ATCC 3502 5187753 YP_001254806.1 CDS CBO2316 NC_009495.1 2469809 2470213 R hypothetical protein complement(2469809..2470213) Clostridium botulinum A str. ATCC 3502 5187091 YP_001254807.1 CDS CBO2316A NC_009495.1 2470250 2470321 R hypothetical protein complement(2470250..2470321) Clostridium botulinum A str. ATCC 3502 5204281 YP_001254808.1 CDS CBO2317 NC_009495.1 2470352 2470471 R Doubtful CDS.; hypothetical protein complement(2470352..2470471) Clostridium botulinum A str. ATCC 3502 5186572 YP_001254809.1 CDS CBO2318 NC_009495.1 2470581 2470751 R hypothetical protein complement(2470581..2470751) Clostridium botulinum A str. ATCC 3502 5187085 YP_001254811.1 CDS CBO2320 NC_009495.1 2470962 2471162 R DNA-binding phage protein complement(2470962..2471162) Clostridium botulinum A str. ATCC 3502 5187489 YP_001254812.1 CDS CBO2321 NC_009495.1 2471291 2471911 D hypothetical protein 2471291..2471911 Clostridium botulinum A str. ATCC 3502 5186576 YP_001254813.1 CDS CBO2322 NC_009495.1 2472271 2474619 R Poor database matches. C-terminus is weakly similar to the C-terminal region of Rhizobium loti hypothetical protein MSI089 SWALL:Q8KGX4 (EMBL:AL672112) (847 aa) fasta scores: E(): 1.5e-07, 26.54 38d in 584 aa; hypothetical protein complement(2472271..2474619) Clostridium botulinum A str. ATCC 3502 5186577 YP_001254814.1 CDS CBO2323 NC_009495.1 2474631 2475722 R N-terminal region is similar to Bordetella bronchiseptica ATPase BB0910 SWALL:CAE31409 (EMBL:BX640439) (331 aa) fasta scores: E(): 7.3e-24,32.57 38d in 307 aa; ATPase complement(2474631..2475722) Clostridium botulinum A str. ATCC 3502 5186578 YP_001254815.1 CDS CBO2324 NC_009495.1 2476131 2476937 R hypothetical protein complement(2476131..2476937) Clostridium botulinum A str. ATCC 3502 5186579 YP_001254816.1 CDS CBO2325 NC_009495.1 2477046 2477807 R Similar to the N-terminal region of Anabaena sp. hypothetical protein ALL1140 SWALL:Q8YXS1 (EMBL:AP003584) (313 aa) fasta scores: E(): 5.2e-30, 45.1 38d in 235 aa; Also similar to CBO1751 (81.16 38d), CBO1653 (77.4 id.), CBO3016 (47.6 38d.); N-acetylmuramoyl-L-alanine amidase complement(2477046..2477807) Clostridium botulinum A str. ATCC 3502 5186580 YP_001254817.1 CDS CBO2326 NC_009495.1 2477847 2478041 R hypothetical protein complement(2477847..2478041) Clostridium botulinum A str. ATCC 3502 5187932 YP_001254818.1 CDS CBO2327 NC_009495.1 2478055 2478309 R hypothetical protein complement(2478055..2478309) Clostridium botulinum A str. ATCC 3502 5187628 YP_001254819.1 CDS CBO2328 NC_009495.1 2478334 2479356 R C-5 cytosine-specific DNA methylase complement(2478334..2479356) Clostridium botulinum A str. ATCC 3502 5186583 YP_001254820.1 CDS CBO2329 NC_009495.1 2479465 2479587 R hypothetical protein complement(2479465..2479587) Clostridium botulinum A str. ATCC 3502 5186584 YP_001254821.1 CDS CBO2330 NC_009495.1 2479580 2479933 R hypothetical protein complement(2479580..2479933) Clostridium botulinum A str. ATCC 3502 5186585 YP_001254822.1 CDS CBO2331 NC_009495.1 2479946 2481631 R N-terminal region is similar to Bacteriophage P2 probable tail fiber protein H SWALL:VPH_BPP2 (SWALL:P26700) (669 aa) fasta scores: E(): 6.4e-14, 31.07 id in 280 aa; tail fiber protein complement(2479946..2481631) Clostridium botulinum A str. ATCC 3502 5186586 YP_001254823.1 CDS CBO2332 NC_009495.1 2481634 2482269 R N-terminus is weakly similar to the N-terminal region of Bacillus subtilis hypothetical protein BSU25970 SWALL:YQCA_BACSU (SWALL:P45936) (192 aa) fasta scores: E(): 0.0063, 24.52 38d in 159 aa; hypothetical protein complement(2481634..2482269) Clostridium botulinum A str. ATCC 3502 5186587 YP_001254824.1 CDS CBO2333 NC_009495.1 2482266 2483396 R hypothetical protein complement(2482266..2483396) Clostridium botulinum A str. ATCC 3502 5186588 YP_001254825.1 CDS CBO2334 NC_009495.1 2483402 2483857 R hypothetical protein complement(2483402..2483857) Clostridium botulinum A str. ATCC 3502 5186589 YP_001254826.1 CDS CBO2335 NC_009495.1 2483850 2484182 R hypothetical protein complement(2483850..2484182) Clostridium botulinum A str. ATCC 3502 5186590 YP_001254827.1 CDS CBO2336 NC_009495.1 2484166 2485134 R hypothetical protein complement(2484166..2485134) Clostridium botulinum A str. ATCC 3502 5186591 YP_001254828.1 CDS CBO2337 NC_009495.1 2485136 2485789 R hypothetical protein complement(2485136..2485789) Clostridium botulinum A str. ATCC 3502 5186592 YP_001254829.1 CDS CBO2338 NC_009495.1 2485857 2486375 R N-terminal region is weakly similar to Clostridium perfringens hypothetical protein CPE1047 SWALL:Q8XLJ4 (EMBL:AP003189) (149 aa) fasta scores: E(): 0.17, 28.48 id in 158 aa; puattive membrane protein complement(2485857..2486375) Clostridium botulinum A str. ATCC 3502 5186593 YP_001254830.1 CDS CBO2339 NC_009495.1 2486428 2489409 R Internal region is similar to the N-terminal region of Lactococcus lactis bacteriophage TP901-1 tape measure protein Tmp SWALL:Q9G097 (EMBL:AF252967) (937 aa) fasta scores: E(): 2.9e-38, 34.52 38d in 562 aa; hypothetical protein complement(2486428..2489409) Clostridium botulinum A str. ATCC 3502 5186594 YP_001254831.1 CDS CBO2339A NC_009495.1 2489410 2489556 R hypothetical protein complement(2489410..2489556) Clostridium botulinum A str. ATCC 3502 5204282 YP_001254832.1 CDS CBO2340 NC_009495.1 2489592 2490029 R hypothetical protein complement(2489592..2490029) Clostridium botulinum A str. ATCC 3502 5186595 YP_001254833.1 CDS CBO2341 NC_009495.1 2490053 2490463 R hypothetical protein complement(2490053..2490463) Clostridium botulinum A str. ATCC 3502 5186596 YP_001254834.1 CDS CBO2342 NC_009495.1 2490476 2491882 R hypothetical protein complement(2490476..2491882) Clostridium botulinum A str. ATCC 3502 5186597 YP_001254835.1 CDS CBO2343 NC_009495.1 2491883 2492083 R hypothetical protein complement(2491883..2492083) Clostridium botulinum A str. ATCC 3502 5186598 YP_001254836.1 CDS CBO2344 NC_009495.1 2492096 2492917 R hypothetical protein complement(2492096..2492917) Clostridium botulinum A str. ATCC 3502 5186599 YP_001254837.1 CDS CBO2345 NC_009495.1 2492920 2493144 R hypothetical protein complement(2492920..2493144) Clostridium botulinum A str. ATCC 3502 5186600 YP_001254838.1 CDS CBO2346 NC_009495.1 2493148 2493552 R hypothetical protein complement(2493148..2493552) Clostridium botulinum A str. ATCC 3502 5186601 YP_001254839.1 CDS CBO2347 NC_009495.1 2493554 2493940 R hypothetical protein complement(2493554..2493940) Clostridium botulinum A str. ATCC 3502 5186602 YP_001254840.1 CDS CBO2348 NC_009495.1 2493941 2494261 R hypothetical protein complement(2493941..2494261) Clostridium botulinum A str. ATCC 3502 5186603 YP_001254841.1 CDS CBO2349 NC_009495.1 2494264 2494494 R hypothetical protein complement(2494264..2494494) Clostridium botulinum A str. ATCC 3502 5186604 YP_001254842.1 CDS CBO2350 NC_009495.1 2494552 2495604 R phage capsid protein complement(2494552..2495604) Clostridium botulinum A str. ATCC 3502 5186605 YP_001254843.1 CDS CBO2351 NC_009495.1 2495618 2496010 R hypothetical protein complement(2495618..2496010) Clostridium botulinum A str. ATCC 3502 5186606 YP_001254844.1 CDS CBO2352 NC_009495.1 2496025 2496639 R hypothetical protein complement(2496025..2496639) Clostridium botulinum A str. ATCC 3502 5186607 YP_001254845.1 CDS CBO2353 NC_009495.1 2496915 2498876 R N-terminal region is similar to Clostridium tetani protein CTC01089 SWALL:Q896B9 (EMBL:AE015939) (566 aa) fasta scores: E(): 6.5e-24, 25.3 38d in 581 aa; hypothetical protein complement(2496915..2498876) Clostridium botulinum A str. ATCC 3502 5186608 YP_001254846.1 CDS CBO2354 NC_009495.1 2498876 2500396 R hypothetical protein complement(2498876..2500396) Clostridium botulinum A str. ATCC 3502 5186609 YP_001254847.1 CDS CBO2355 NC_009495.1 2500396 2501742 R terminase large subunit complement(2500396..2501742) Clostridium botulinum A str. ATCC 3502 5186610 YP_001254848.1 CDS CBO2356 NC_009495.1 2501735 2502586 R phage terminase small subunit complement(2501735..2502586) Clostridium botulinum A str. ATCC 3502 5186611 YP_001254849.1 CDS CBO2357 NC_009495.1 2502633 2503247 R hypothetical protein complement(2502633..2503247) Clostridium botulinum A str. ATCC 3502 5186612 YP_001254850.1 CDS CBO2357A NC_009495.1 2503250 2503363 R hypothetical protein complement(2503250..2503363) Clostridium botulinum A str. ATCC 3502 5204283 YP_001254851.1 CDS CBO2358 NC_009495.1 2503625 2503822 R hypothetical protein complement(2503625..2503822) Clostridium botulinum A str. ATCC 3502 5186613 YP_001254852.1 CDS CBO2359 NC_009495.1 2503905 2504114 R hypothetical protein complement(2503905..2504114) Clostridium botulinum A str. ATCC 3502 5186614 YP_001254853.1 CDS CBO2360 NC_009495.1 2504059 2504232 R . Doubtful CDS; hypothetical protein complement(2504059..2504232) Clostridium botulinum A str. ATCC 3502 5187931 YP_001254854.1 CDS CBO2361 NC_009495.1 2504471 2505004 R hypothetical protein complement(2504471..2505004) Clostridium botulinum A str. ATCC 3502 5186616 YP_001254855.1 CDS CBO2362 NC_009495.1 2504985 2505410 R hypothetical protein complement(2504985..2505410) Clostridium botulinum A str. ATCC 3502 5186617 YP_001254856.1 CDS CBO2362A NC_009495.1 2505407 2505598 R hypothetical protein complement(2505407..2505598) Clostridium botulinum A str. ATCC 3502 5204284 YP_001254857.1 CDS CBO2363 NC_009495.1 2505696 2505911 R hypothetical protein complement(2505696..2505911) Clostridium botulinum A str. ATCC 3502 5186618 YP_001254858.1 CDS CBO2364 NC_009495.1 2505928 2506923 R phage integrase complement(2505928..2506923) Clostridium botulinum A str. ATCC 3502 5186619 YP_001254859.1 CDS CBO2365 NC_009495.1 2506995 2507240 R hypothetical protein complement(2506995..2507240) Clostridium botulinum A str. ATCC 3502 5186620 YP_001254860.1 CDS CBO2366 NC_009495.1 2507453 2507947 R nitroimidazole resistance protein complement(2507453..2507947) Clostridium botulinum A str. ATCC 3502 5186621 YP_001254861.1 CDS CBO2367 NC_009495.1 2508240 2508551 R hypothetical protein complement(2508240..2508551) Clostridium botulinum A str. ATCC 3502 5186622 YP_001254862.1 CDS CBO2368 NC_009495.1 2508581 2509351 R hypothetical protein complement(2508581..2509351) Clostridium botulinum A str. ATCC 3502 5187426 YP_001254863.1 CDS CBO2368A NC_009495.1 2509392 2509517 R hypothetical protein complement(2509392..2509517) Clostridium botulinum A str. ATCC 3502 5204285 YP_001254864.1 CDS CBO2369 NC_009495.1 2509529 2510299 R hypothetical protein complement(2509529..2510299) Clostridium botulinum A str. ATCC 3502 5186624 YP_001254865.1 CDS CBO2370 NC_009495.1 2510336 2510965 R hypothetical protein complement(2510336..2510965) Clostridium botulinum A str. ATCC 3502 5187030 YP_001254866.1 CDS CBO2371 NC_009495.1 2510953 2511375 R hypothetical protein complement(2510953..2511375) Clostridium botulinum A str. ATCC 3502 5187805 YP_001254867.1 CDS CBO2372 NC_009495.1 2511372 2511572 R . Doubtful CDS; hypothetical protein complement(2511372..2511572) Clostridium botulinum A str. ATCC 3502 5186627 YP_001254868.1 CDS CBO2373 NC_009495.1 2511624 2511986 R hypothetical protein complement(2511624..2511986) Clostridium botulinum A str. ATCC 3502 5186628 YP_001254869.1 CDS abrB NC_009495.1 2512004 2512243 R SpoVT/AbrB family regulatory protein complement(2512004..2512243) Clostridium botulinum A str. ATCC 3502 5186629 YP_001254870.1 CDS CBO2375 NC_009495.1 2512246 2512575 R hypothetical protein complement(2512246..2512575) Clostridium botulinum A str. ATCC 3502 5187787 YP_001254871.1 CDS CBO2376 NC_009495.1 2512581 2513534 R N-terminal region is similar to Bacillus subtilis RNA polymerase sigma-E factor precursor SigE or SpoIIGB or BSU15320 SWALL:RPSE_BACSU (SWALL:P06222) (239 aa) fasta scores: E(): 7.1e-08, 32.95 38d in 176 aa; RNA polymerase sigma factor complement(2512581..2513534) Clostridium botulinum A str. ATCC 3502 5186631 YP_001254872.1 CDS CBO2377 NC_009495.1 2513589 2513822 R hypothetical protein complement(2513589..2513822) Clostridium botulinum A str. ATCC 3502 5186632 YP_001254873.1 CDS CBO2378 NC_009495.1 2513842 2514645 R hypothetical protein complement(2513842..2514645) Clostridium botulinum A str. ATCC 3502 5186633 YP_001254874.1 CDS CBO2379 NC_009495.1 2514605 2515465 R hypothetical protein complement(2514605..2515465) Clostridium botulinum A str. ATCC 3502 5186634 YP_001254875.1 CDS CBO2380 NC_009495.1 2515498 2515698 R hypothetical protein complement(2515498..2515698) Clostridium botulinum A str. ATCC 3502 5186635 YP_001254876.1 CDS CBO2381 NC_009495.1 2515768 2515905 R . Doubtful CDS; hypothetical protein complement(2515768..2515905) Clostridium botulinum A str. ATCC 3502 5186636 YP_001254878.1 CDS CBO2382 NC_009495.1 2516042 2516188 R hypothetical protein complement(2516042..2516188) Clostridium botulinum A str. ATCC 3502 5187431 YP_001254879.1 CDS CBO2383 NC_009495.1 2516191 2517048 R hypothetical protein complement(2516191..2517048) Clostridium botulinum A str. ATCC 3502 5186638 YP_001254880.1 CDS CBO2384 NC_009495.1 2517060 2517545 R hypothetical protein complement(2517060..2517545) Clostridium botulinum A str. ATCC 3502 5187834 YP_001254881.1 CDS CBO2385 NC_009495.1 2517786 2517962 R hypothetical protein complement(2517786..2517962) Clostridium botulinum A str. ATCC 3502 5187862 YP_001254882.1 CDS CBO2386 NC_009495.1 2518017 2518271 R hypothetical protein complement(2518017..2518271) Clostridium botulinum A str. ATCC 3502 5187997 YP_001254883.1 CDS CBO2387 NC_009495.1 2518279 2518560 D hypothetical protein 2518279..2518560 Clostridium botulinum A str. ATCC 3502 5186642 YP_001254884.1 CDS CBO2388 NC_009495.1 2518557 2518904 R Similar to the N-terminal region of Clostridium acetobutylicum hypothetical protein CAC1944 SWALL:Q97HR4 (EMBL:AE007699) (146 aa) fasta scores: E(): 1.3e-12,44.53 38d in 119 aa; hypothetical protein complement(2518557..2518904) Clostridium botulinum A str. ATCC 3502 5186643 YP_001254885.1 CDS CBO2389 NC_009495.1 2518904 2519704 R N-terminus is similar to the N-terminal region of Listeria innocua hypothetical protein LIN2418 SWALL:Q928W4 (EMBL:AL596172) (256 aa) fasta scores: E(): 1e-11, 31.14 id in 228 aa; BRO family protein complement(2518904..2519704) Clostridium botulinum A str. ATCC 3502 5187999 YP_001254886.1 CDS CBO2390 NC_009495.1 2519764 2519988 R DNA-binding phage protein complement(2519764..2519988) Clostridium botulinum A str. ATCC 3502 5186645 YP_001254887.1 CDS CBO2391 NC_009495.1 2520160 2520594 D DNA-binding phage protein 2520160..2520594 Clostridium botulinum A str. ATCC 3502 5186646 YP_001254888.1 CDS CBO2392 NC_009495.1 2520605 2520745 R Doubtful CDS.; hypothetical protein complement(2520605..2520745) Clostridium botulinum A str. ATCC 3502 5186647 YP_001254889.1 CDS CBO2393 NC_009495.1 2521133 2521384 D N-terminus is similar to the N-terminal region of Bradyrhizobium japonicum protein BSR0038 SWALL:Q89YB6 (EMBL:AP005935) (93 aa) fasta scores: E(): 0.0012, 52.94 id in 51 aa; DNA-binding phage protein 2521133..2521384 Clostridium botulinum A str. ATCC 3502 5188000 YP_001254890.1 CDS CBO2394 NC_009495.1 2521384 2523003 D resolvase 2521384..2523003 Clostridium botulinum A str. ATCC 3502 5187998 YP_001254891.1 CDS CBO2396 NC_009495.1 2524131 2525561 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(2524131..2525561) Clostridium botulinum A str. ATCC 3502 5186651 YP_001254892.1 CDS CBO2397 NC_009495.1 2525804 2526034 D hypothetical protein 2525804..2526034 Clostridium botulinum A str. ATCC 3502 5186652 YP_001254893.1 CDS ptsH NC_009495.1 2526062 2526319 R phosphocarrier protein HPr complement(2526062..2526319) Clostridium botulinum A str. ATCC 3502 5186653 YP_001254894.1 CDS aspC NC_009495.1 2526430 2527623 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(2526430..2527623) Clostridium botulinum A str. ATCC 3502 5186654 YP_001254895.1 CDS CBO2400 NC_009495.1 2527768 2528124 R hypothetical protein complement(2527768..2528124) Clostridium botulinum A str. ATCC 3502 5187388 YP_001254896.1 CDS CBO2401 NC_009495.1 2528121 2529404 R hypothetical protein complement(2528121..2529404) Clostridium botulinum A str. ATCC 3502 5187827 YP_001254897.1 CDS CBO2402 NC_009495.1 2529423 2530289 R catalyzes the formation of decaprenylphosphoryl-5-phosphoribose from phosphoribose diphosphate and decaprenyl phosphate; phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase complement(2529423..2530289) Clostridium botulinum A str. ATCC 3502 5187662 YP_001254898.1 CDS spoVS NC_009495.1 2530452 2530712 R stage V sporulation protein S complement(2530452..2530712) Clostridium botulinum A str. ATCC 3502 5186658 YP_001254899.1 CDS CBO2404 NC_009495.1 2530851 2532392 R protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase complement(2530851..2532392) Clostridium botulinum A str. ATCC 3502 5186659 YP_001254900.1 CDS recA NC_009495.1 2532627 2533685 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(2532627..2533685) Clostridium botulinum A str. ATCC 3502 5186660 YP_001254901.1 CDS CBO2406 NC_009495.1 2533833 2534426 R CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(2533833..2534426) Clostridium botulinum A str. ATCC 3502 5186661 YP_001254902.1 CDS CBO2407 NC_009495.1 2534401 2535738 R MiaB family RNA modification protein complement(2534401..2535738) Clostridium botulinum A str. ATCC 3502 5186662 YP_001254903.1 CDS ftsK NC_009495.1 2535833 2538109 R DNA translocase FtsK/SpoIIIE complement(2535833..2538109) Clostridium botulinum A str. ATCC 3502 5186663 YP_001254904.1 CDS tepA NC_009495.1 2538590 2539282 R Clp protease complement(2538590..2539282) Clostridium botulinum A str. ATCC 3502 5186664 YP_001254905.1 CDS CBO2410 NC_009495.1 2539530 2540735 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; diaminopimelate sensitive; aspartate kinase complement(2539530..2540735) Clostridium botulinum A str. ATCC 3502 5186665 YP_001254906.1 CDS CBO2411 NC_009495.1 2540751 2541023 R PRC-barrel domain-containing protein complement(2540751..2541023) Clostridium botulinum A str. ATCC 3502 5186666 YP_001254907.1 CDS CBO2412 NC_009495.1 2541100 2542401 R peptidase, M16 family complement(2541100..2542401) Clostridium botulinum A str. ATCC 3502 5187623 YP_001254908.1 CDS comR NC_009495.1 2542576 2544684 R polynucleotide phosphorylase complement(2542576..2544684) Clostridium botulinum A str. ATCC 3502 5186668 YP_001254909.1 CDS rpsO NC_009495.1 2544948 2545211 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(2544948..2545211) Clostridium botulinum A str. ATCC 3502 5186669 YP_001254910.1 CDS CBO2415 NC_009495.1 2545344 2546264 R catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase complement(2545344..2546264) Clostridium botulinum A str. ATCC 3502 5187880 YP_001254911.1 CDS truB NC_009495.1 2546277 2547146 R catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B complement(2546277..2547146) Clostridium botulinum A str. ATCC 3502 5186671 YP_001254912.1 CDS CBO2417 NC_009495.1 2547147 2548118 R DHH family protein complement(2547147..2548118) Clostridium botulinum A str. ATCC 3502 5186672 YP_001254913.1 CDS rbfA NC_009495.1 2548099 2548461 R associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A complement(2548099..2548461) Clostridium botulinum A str. ATCC 3502 5204287 YP_001254914.1 CDS infB NC_009495.1 2548492 2550558 R Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 complement(2548492..2550558) Clostridium botulinum A str. ATCC 3502 5186673 YP_001254915.1 CDS CBO2419 NC_009495.1 2550576 2550893 R ribosomal protein L7Ae family protein complement(2550576..2550893) Clostridium botulinum A str. ATCC 3502 5187437 YP_001254916.1 CDS CBO2419A NC_009495.1 2550880 2551152 R hypothetical protein complement(2550880..2551152) Clostridium botulinum A str. ATCC 3502 5204288 YP_001254917.1 CDS nusA NC_009495.1 2551212 2552585 R modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA complement(2551212..2552585) Clostridium botulinum A str. ATCC 3502 5186675 YP_001254918.1 CDS CBO2421 NC_009495.1 2552602 2553063 R in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein complement(2552602..2553063) Clostridium botulinum A str. ATCC 3502 5187192 YP_001254919.1 CDS CBO2422 NC_009495.1 2553128 2553268 R . Doubtful CDS; hypothetical protein complement(2553128..2553268) Clostridium botulinum A str. ATCC 3502 5186677 YP_001254920.1 CDS polC NC_009495.1 2553368 2557666 R catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity; DNA polymerase III PolC complement(2553368..2557666) Clostridium botulinum A str. ATCC 3502 5186678 YP_001254921.1 CDS ispG NC_009495.1 2557945 2558994 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(2557945..2558994) Clostridium botulinum A str. ATCC 3502 5186679 YP_001254922.1 CDS CBO2425 NC_009495.1 2559135 2560145 R membrane-associated zinc metalloprotease complement(2559135..2560145) Clostridium botulinum A str. ATCC 3502 5186680 YP_001254923.1 CDS CBO2426 NC_009495.1 2560190 2561347 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(2560190..2561347) Clostridium botulinum A str. ATCC 3502 5186681 YP_001254924.1 CDS CBO2427 NC_009495.1 2561384 2562364 R hypothetical protein complement(2561384..2562364) Clostridium botulinum A str. ATCC 3502 5186682 YP_001254925.1 CDS CBO2428 NC_009495.1 2562464 2562586 R . Doubtful CDS; hypothetical protein complement(2562464..2562586) Clostridium botulinum A str. ATCC 3502 5186683 YP_001254926.1 CDS CBO2428A NC_009495.1 2562645 2562833 R . Doubtful CDS; hypothetical protein complement(2562645..2562833) Clostridium botulinum A str. ATCC 3502 5204289 YP_001254927.1 CDS CBO2429 NC_009495.1 2562856 2562975 R . Doubtful CDS; hypothetical protein complement(2562856..2562975) Clostridium botulinum A str. ATCC 3502 5187996 YP_001254928.1 CDS CBO2430 NC_009495.1 2563019 2563816 R phosphatidate cytidylyltransferase complement(2563019..2563816) Clostridium botulinum A str. ATCC 3502 5186685 YP_001254929.1 CDS uppS NC_009495.1 2563841 2564599 R catalyzes the formation of UDP pyrophosphate from isopentenyl pyrophosphate; UDP pyrophosphate synthase complement(2563841..2564599) Clostridium botulinum A str. ATCC 3502 5186686 YP_001254930.1 CDS frr NC_009495.1 2564665 2565219 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(2564665..2565219) Clostridium botulinum A str. ATCC 3502 5186687 YP_001254931.1 CDS pyrH NC_009495.1 2565235 2565951 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(2565235..2565951) Clostridium botulinum A str. ATCC 3502 5186688 YP_001254932.1 CDS CBO2433A NC_009495.1 2566075 2566260 D . Doubtful CDS; hypothetical protein 2566075..2566260 Clostridium botulinum A str. ATCC 3502 5204290 YP_001254933.1 CDS tsf NC_009495.1 2566326 2567249 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(2566326..2567249) Clostridium botulinum A str. ATCC 3502 5186689 YP_001254934.1 CDS rpsB NC_009495.1 2567337 2568038 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(2567337..2568038) Clostridium botulinum A str. ATCC 3502 5186690 YP_001254935.1 CDS codY NC_009495.1 2568275 2569051 R CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; transcriptional repressor CodY complement(2568275..2569051) Clostridium botulinum A str. ATCC 3502 5186691 YP_001254936.1 CDS CBO2437 NC_009495.1 2569258 2571348 R catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I complement(2569258..2571348) Clostridium botulinum A str. ATCC 3502 5186692 YP_001254937.1 CDS CBO2438 NC_009495.1 2571732 2572817 R C-terminus is similar to the C-terminal region of Haemophilus influenzae Smf protein HI0985 SWALL:SMF_HAEIN (SWALL:P43862) (373 aa) fasta scores: E(): 3e-26, 35.64 id in 317 aa, and to Clostridium tetani Smf protein,DNA processing chain A CTC01258 SWALL:Q895L5 (EMBL:AE015940) (361 aa) fasta scores: E(): 1.5e-65,54.69 38d in 362 aa; DNA protecting protein DprA complement(2571732..2572817) Clostridium botulinum A str. ATCC 3502 5186693 YP_001254938.1 CDS CBO2439 NC_009495.1 2573017 2574540 D Mg chelatase-like protein 2573017..2574540 Clostridium botulinum A str. ATCC 3502 5186694 YP_001254939.1 CDS CBO2440 NC_009495.1 2574556 2574927 D hypothetical protein 2574556..2574927 Clostridium botulinum A str. ATCC 3502 5186695 YP_001254940.1 CDS rnhB NC_009495.1 2575010 2575819 R RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII complement(2575010..2575819) Clostridium botulinum A str. ATCC 3502 5186696 YP_001254941.1 CDS rbgA NC_009495.1 2576116 2576994 R essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase complement(2576116..2576994) Clostridium botulinum A str. ATCC 3502 5186697 YP_001254942.1 CDS CBO2443 NC_009495.1 2577299 2577823 R signal peptidase I complement(2577299..2577823) Clostridium botulinum A str. ATCC 3502 5186698 YP_001254943.1 CDS rplS NC_009495.1 2577882 2578226 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(2577882..2578226) Clostridium botulinum A str. ATCC 3502 5186699 YP_001254944.1 CDS trmD NC_009495.1 2578377 2579099 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(2578377..2579099) Clostridium botulinum A str. ATCC 3502 5186700 YP_001254945.1 CDS rimM NC_009495.1 2579090 2579584 R Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM complement(2579090..2579584) Clostridium botulinum A str. ATCC 3502 5187654 YP_001254946.1 CDS CBO2447 NC_009495.1 2579697 2579924 R hypothetical protein complement(2579697..2579924) Clostridium botulinum A str. ATCC 3502 5186702 YP_001254947.1 CDS rpsP NC_009495.1 2579945 2580193 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(2579945..2580193) Clostridium botulinum A str. ATCC 3502 5186703 YP_001254948.1 CDS ffh NC_009495.1 2580224 2581573 R signal recognition particle protein complement(2580224..2581573) Clostridium botulinum A str. ATCC 3502 5186704 YP_001254949.1 CDS CBO2450 NC_009495.1 2581586 2581918 R DNA-binding protein complement(2581586..2581918) Clostridium botulinum A str. ATCC 3502 5186705 YP_001254950.1 CDS CBO2451 NC_009495.1 2582142 2583053 R Similar to Bacillus subtilis cell division protein FtsY homolog FtsY or Srb or BSU15950 SWALL:FTSY_BACSU (SWALL:P51835) (329 aa) fasta scores: E(): 5.2e-52, 53.15 id in 301 aa, and to the C-terminal region of Escherichia coli cell division protein FtsY or b3464 SWALL:FTSY_ECOLI (SWALL:P10121) (497 aa) fasta scores: E(): 3.3e-44, 49 38d in 300 aa; signal recognition particle-docking protein FtsY complement(2582142..2583053) Clostridium botulinum A str. ATCC 3502 5186706 YP_001254951.1 CDS smc NC_009495.1 2583216 2586797 R chromosome segregation protein SMC complement(2583216..2586797) Clostridium botulinum A str. ATCC 3502 5186707 YP_001254952.1 CDS CBO2453 NC_009495.1 2587061 2588152 R radical SAM domain protein complement(2587061..2588152) Clostridium botulinum A str. ATCC 3502 5186708 YP_001254953.1 CDS rnc NC_009495.1 2588145 2588858 R cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III complement(2588145..2588858) Clostridium botulinum A str. ATCC 3502 5186709 YP_001254954.1 CDS acpP NC_009495.1 2588961 2589203 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(2588961..2589203) Clostridium botulinum A str. ATCC 3502 5186710 YP_001254955.1 CDS plsX NC_009495.1 2589272 2590279 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX complement(2589272..2590279) Clostridium botulinum A str. ATCC 3502 5186711 YP_001254956.1 CDS rpmF NC_009495.1 2590369 2590560 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(2590369..2590560) Clostridium botulinum A str. ATCC 3502 5186712 YP_001254957.1 CDS ackA NC_009495.1 2591182 2592375 R AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase complement(2591182..2592375) Clostridium botulinum A str. ATCC 3502 5186713 YP_001254958.1 CDS eutD NC_009495.1 2592515 2593513 R in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; phosphotransacetylase complement(2592515..2593513) Clostridium botulinum A str. ATCC 3502 5186714 YP_001254959.1 CDS CBO2460 NC_009495.1 2593847 2594725 R hypothetical protein complement(2593847..2594725) Clostridium botulinum A str. ATCC 3502 5186715 YP_001254960.1 CDS prdB1 NC_009495.1 2595092 2595811 R Similar to Clostridium sticklandii proline reductase PrdB SWALL:Q9Z4Q7 (EMBL:AJ130879) (242 aa) fasta scores: E(): 8.5e-70, 79.07 38d in 239 aa. CDS contains an in frame UGA codon for probable selenocysteine insertion; proline reductase complement(join(2595092..2595364,2595368..2595811)) Clostridium botulinum A str. ATCC 3502 5186716 YP_001254961.1 CDS CBO2463 NC_009495.1 2595841 2596116 R hypothetical protein complement(2595841..2596116) Clostridium botulinum A str. ATCC 3502 5186718 YP_001254962.1 CDS prdA1 NC_009495.1 2596125 2598239 R Highly similar to CBO2480 (84.5 38d), CBO2483 (63.9 38d); proline reductase complement(2596125..2598239) Clostridium botulinum A str. ATCC 3502 5186719 YP_001254963.1 CDS CBO2465 NC_009495.1 2598272 2598442 R hypothetical protein complement(2598272..2598442) Clostridium botulinum A str. ATCC 3502 5186720 YP_001254964.1 CDS prdC1 NC_009495.1 2598464 2599582 R Similar to the N-terminal region of Clostridium sticklandii electron transfer protein PrdC SWALL:Q9L4Q5 (EMBL:AJ130879) (402 aa) fasta scores: E(): 6e-59, 47.13 id in 367 aa; electron transferring subunit of proline reductase complement(2598464..2599582) Clostridium botulinum A str. ATCC 3502 5186721 YP_001254965.1 CDS CBO2467 NC_009495.1 2600578 2601474 R hypothetical protein complement(2600578..2601474) Clostridium botulinum A str. ATCC 3502 5186722 YP_001254966.1 CDS CBO2468 NC_009495.1 2601785 2603812 R methyl-accepting chemotaxis protein complement(2601785..2603812) Clostridium botulinum A str. ATCC 3502 5187473 YP_001254967.1 CDS CBO2470 NC_009495.1 2605084 2606169 R Identical to CBO3191 (99.4), also similar to CBO3190 (53.8) and similar to the upstream CDS (CBO2471,53.8).; hypothetical protein complement(2605084..2606169) Clostridium botulinum A str. ATCC 3502 5187362 YP_001254968.1 CDS CBO2471 NC_009495.1 2606238 2607314 R Identical CBO3191 (99.7), also similar to CBO3190 (53.5) and similar to the upstream CDS (CBO2470, 53.8).; hypothetical protein complement(2606238..2607314) Clostridium botulinum A str. ATCC 3502 5186726 YP_001254969.1 CDS CBO2472 NC_009495.1 2607869 2609314 D amino acid permease 2607869..2609314 Clostridium botulinum A str. ATCC 3502 5187619 YP_001254970.1 CDS CBO2473 NC_009495.1 2609467 2610336 R hypothetical protein complement(2609467..2610336) Clostridium botulinum A str. ATCC 3502 5186728 YP_001254971.1 CDS prdF NC_009495.1 2610771 2611778 R proline racemase complement(2610771..2611778) Clostridium botulinum A str. ATCC 3502 5186729 YP_001254972.1 CDS prdE NC_009495.1 2611792 2612262 R PrdE protein complement(2611792..2612262) Clostridium botulinum A str. ATCC 3502 5186730 YP_001254973.1 CDS prdD NC_009495.1 2612276 2613052 R PrdD protein complement(2612276..2613052) Clostridium botulinum A str. ATCC 3502 5186731 YP_001254974.1 CDS prdB2 NC_009495.1 2613393 2614118 R Similar to Clostridium sticklandii proline reductase PrdB SWALL:Q9Z4Q7 (EMBL:AJ130879) (242 aa) fasta scores: E(): 1.1e-71, 80.33 38d in 239 aa. CDS contains an in frame UGA codon for probable selenocysteine insertion; subunit of proline reductase complement(join(2613393..2613665,2613669..2614118)) Clostridium botulinum A str. ATCC 3502 5186732 YP_001254975.1 CDS CBO2479 NC_009495.1 2614194 2614469 R hypothetical protein complement(2614194..2614469) Clostridium botulinum A str. ATCC 3502 5186734 YP_001254976.1 CDS prdA2 NC_009495.1 2614478 2616586 R subunit of proline reductase complement(2614478..2616586) Clostridium botulinum A str. ATCC 3502 5186735 YP_001254977.1 CDS CBO2481 NC_009495.1 2616611 2616787 R hypothetical protein complement(2616611..2616787) Clostridium botulinum A str. ATCC 3502 5186736 YP_001254978.1 CDS prdC2 NC_009495.1 2616809 2617927 R Similar to the N-terminal region of Clostridium sticklandii electron transfer protein PrdC SWALL:Q9L4Q5 (EMBL:AJ130879) (402 aa) fasta scores: E(): 9.7e-61,48.77 38d in 367 aa; electron transferring subunit of proline reductase complement(2616809..2617927) Clostridium botulinum A str. ATCC 3502 5186737 YP_001254979.1 CDS prdC3 NC_009495.1 2619269 2620573 R N-terminal region is similar to Clostridium sticklandii electron transfer protein PrdC SWALL:Q9L4Q5 (EMBL:AJ130879) (402 aa) fasta scores: E(): 9e-67, 49.73 id in 380 aa; electron transferring subunit of proline reductase complement(2619269..2620573) Clostridium botulinum A str. ATCC 3502 5186739 YP_001254980.1 CDS CBO2485 NC_009495.1 2621166 2621693 R hypothetical protein complement(2621166..2621693) Clostridium botulinum A str. ATCC 3502 5187678 YP_001254981.1 CDS CBO2486 NC_009495.1 2621698 2622177 R hypothetical protein complement(2621698..2622177) Clostridium botulinum A str. ATCC 3502 5186741 YP_001254982.1 CDS CBO2487 NC_009495.1 2622281 2622580 R . Doubtful CDS; hypothetical protein complement(2622281..2622580) Clostridium botulinum A str. ATCC 3502 5186742 YP_001254983.1 CDS prdC4 NC_009495.1 2623112 2624422 R N-terminal region is similar to Clostridium sticklandii electron transfer protein PrdC SWALL:Q9L4Q5 (EMBL:AJ130879) (402 aa) fasta scores: E(): 3e-68, 49.6 id in 379 aa; electron transferring subunit of proline reductase complement(2623112..2624422) Clostridium botulinum A str. ATCC 3502 5186744 YP_001254984.1 CDS prdR NC_009495.1 2624598 2626352 R sensory box sigma-54 dependent transcriptional regulator complement(2624598..2626352) Clostridium botulinum A str. ATCC 3502 5186745 YP_001254985.1 CDS CBO2491 NC_009495.1 2626688 2627917 D hypothetical protein 2626688..2627917 Clostridium botulinum A str. ATCC 3502 5186746 YP_001254986.1 CDS CBO2492 NC_009495.1 2627977 2629143 D nucleoside recognition domain-containing protein 2627977..2629143 Clostridium botulinum A str. ATCC 3502 5186747 YP_001254987.1 CDS CBO2493 NC_009495.1 2629144 2629668 R hypothetical protein complement(2629144..2629668) Clostridium botulinum A str. ATCC 3502 5186748 YP_001254988.1 CDS coaD NC_009495.1 2629681 2630175 R Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase complement(2629681..2630175) Clostridium botulinum A str. ATCC 3502 5186749 YP_001254989.1 CDS CBO2495 NC_009495.1 2630177 2630734 R methyltransferase complement(2630177..2630734) Clostridium botulinum A str. ATCC 3502 5186750 YP_001254990.1 CDS CBO2496 NC_009495.1 2630996 2633035 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(2630996..2633035) Clostridium botulinum A str. ATCC 3502 5186751 YP_001254991.1 CDS CBO2497 NC_009495.1 2633385 2635010 R DAK2 domain-containing protein complement(2633385..2635010) Clostridium botulinum A str. ATCC 3502 5186752 YP_001254992.1 CDS CBO2498 NC_009495.1 2635025 2635375 R hypothetical protein complement(2635025..2635375) Clostridium botulinum A str. ATCC 3502 5186753 YP_001254993.1 CDS rpmB NC_009495.1 2635575 2635766 D required for 70S ribosome assembly; 50S ribosomal protein L28 2635575..2635766 Clostridium botulinum A str. ATCC 3502 5186754 YP_001254994.1 CDS CBO2500 NC_009495.1 2635815 2635889 R hypothetical protein complement(2635815..2635889) Clostridium botulinum A str. ATCC 3502 5187951 YP_001254995.1 CDS CBO2500A NC_009495.1 2636012 2636167 R hypothetical protein complement(2636012..2636167) Clostridium botulinum A str. ATCC 3502 5204291 YP_001254996.1 CDS CBO2501 NC_009495.1 2636545 2637189 R thiamine pyrophosphokinase complement(2636545..2637189) Clostridium botulinum A str. ATCC 3502 5186756 YP_001254997.1 CDS CBO2502 NC_009495.1 2637191 2637841 R catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase complement(2637191..2637841) Clostridium botulinum A str. ATCC 3502 5186757 YP_001254998.1 CDS CBO2503 NC_009495.1 2637835 2638713 R EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase complement(2637835..2638713) Clostridium botulinum A str. ATCC 3502 5186758 YP_001254999.1 CDS CBO2504 NC_009495.1 2638920 2640911 R protein kinase complement(2638920..2640911) Clostridium botulinum A str. ATCC 3502 5186759 YP_001255000.1 CDS CBO2505 NC_009495.1 2640841 2641599 R protein phosphatase complement(2640841..2641599) Clostridium botulinum A str. ATCC 3502 5187331 YP_001255001.1 CDS CBO2506 NC_009495.1 2641609 2642637 R 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N complement(2641609..2642637) Clostridium botulinum A str. ATCC 3502 5186761 YP_001255002.1 CDS CBO2507 NC_009495.1 2642649 2643977 R ribosomal RNA small subunit methyltransferase B complement(2642649..2643977) Clostridium botulinum A str. ATCC 3502 5187605 YP_001255003.1 CDS CBO2508 NC_009495.1 2643998 2644681 R neutral zinc metallopeptidase complement(2643998..2644681) Clostridium botulinum A str. ATCC 3502 5187716 YP_001255004.1 CDS fmt NC_009495.1 2645032 2645973 R modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase complement(2645032..2645973) Clostridium botulinum A str. ATCC 3502 5186764 YP_001255005.1 CDS def NC_009495.1 2645990 2646433 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(2645990..2646433) Clostridium botulinum A str. ATCC 3502 5186765 YP_001255006.1 CDS CBO2511 NC_009495.1 2646462 2648669 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(2646462..2648669) Clostridium botulinum A str. ATCC 3502 5186766 YP_001255007.1 CDS coaBC NC_009495.1 2649007 2650194 R catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase complement(2649007..2650194) Clostridium botulinum A str. ATCC 3502 5187621 YP_001255008.1 CDS rpoZ NC_009495.1 2650196 2650414 R Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega complement(2650196..2650414) Clostridium botulinum A str. ATCC 3502 5204339 YP_001255009.1 CDS gmk NC_009495.1 2650395 2651024 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(2650395..2651024) Clostridium botulinum A str. ATCC 3502 5186768 YP_001255010.1 CDS CBO2514 NC_009495.1 2651024 2651299 R hypothetical protein complement(2651024..2651299) Clostridium botulinum A str. ATCC 3502 5186769 YP_001255011.1 CDS CBO2515 NC_009495.1 2651315 2652193 R hypothetical protein complement(2651315..2652193) Clostridium botulinum A str. ATCC 3502 5187279 YP_001255012.1 CDS CBO2516 NC_009495.1 2652387 2653388 R type II L-asparaginase complement(2652387..2653388) Clostridium botulinum A str. ATCC 3502 5187281 YP_001255013.1 CDS CBO2516A NC_009495.1 2653939 2654100 D Similar to the C-terminal region of Clostridium perfringens probable transcriptional regulator CPE1097 SWALL:Q8XLE5 (EMBL:AP003189) (70 aa) fasta scores: E(): 6.4e-09, 47.17 38d in 53 aa; hypothetical protein 2653939..2654100 Clostridium botulinum A str. ATCC 3502 5204292 YP_001255014.1 CDS spoIVA NC_009495.1 2654828 2656309 R stage IV sporulation protein A complement(2654828..2656309) Clostridium botulinum A str. ATCC 3502 5187390 YP_001255015.1 CDS CBO2517A NC_009495.1 2656695 2656823 R hypothetical protein complement(2656695..2656823) Clostridium botulinum A str. ATCC 3502 5204358 YP_001255016.1 CDS gpsA NC_009495.1 2656907 2657905 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(2656907..2657905) Clostridium botulinum A str. ATCC 3502 5187385 YP_001255017.1 CDS engA NC_009495.1 2658076 2659395 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(2658076..2659395) Clostridium botulinum A str. ATCC 3502 5186774 YP_001255018.1 CDS CBO2520 NC_009495.1 2659398 2660732 R hypothetical protein complement(2659398..2660732) Clostridium botulinum A str. ATCC 3502 5186775 YP_001255019.1 CDS CBO2521 NC_009495.1 2661184 2661837 R phosphate transporter PhoU complement(2661184..2661837) Clostridium botulinum A str. ATCC 3502 5186776 YP_001255020.1 CDS phoT NC_009495.1 2661867 2662616 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein complement(2661867..2662616) Clostridium botulinum A str. ATCC 3502 5186777 YP_001255021.1 CDS CBO2523 NC_009495.1 2662629 2663513 R phosphate ABC transporter permease complement(2662629..2663513) Clostridium botulinum A str. ATCC 3502 5187687 YP_001255022.1 CDS CBO2524 NC_009495.1 2663513 2664436 R phosphate ABC transporter permease complement(2663513..2664436) Clostridium botulinum A str. ATCC 3502 5186779 YP_001255023.1 CDS CBO2525 NC_009495.1 2664644 2665516 R phosphate ABC transporter phosphate-binding protein complement(2664644..2665516) Clostridium botulinum A str. ATCC 3502 5186780 YP_001255024.1 CDS CBO2526 NC_009495.1 2665763 2667472 R phosphate regulon sensor protein complement(2665763..2667472) Clostridium botulinum A str. ATCC 3502 5186781 YP_001255025.1 CDS CBO2527 NC_009495.1 2667484 2668182 R phosphate regulon DNA-binding response regulator complement(2667484..2668182) Clostridium botulinum A str. ATCC 3502 5186782 YP_001255026.1 CDS CBO2528 NC_009495.1 2668193 2668912 R hypothetical protein complement(2668193..2668912) Clostridium botulinum A str. ATCC 3502 5186783 YP_001255027.1 CDS CBO2529 NC_009495.1 2669151 2669312 R Similar to the N-termina region of Bacillus cereus hypothetical protein BC4080 SWALL:Q819A6 (EMBL:AE017011) (181 aa) fasta scores: E(): 3, 31.25 38d in 48 aa; hypothetical protein complement(2669151..2669312) Clostridium botulinum A str. ATCC 3502 5186784 YP_001255028.1 CDS nrdR NC_009495.1 2669361 2669816 R transcriptional regulator NrdR complement(2669361..2669816) Clostridium botulinum A str. ATCC 3502 5186785 YP_001255029.1 CDS CBO2531 NC_009495.1 2669947 2670210 R PRC-barrel domain-containing protein complement(2669947..2670210) Clostridium botulinum A str. ATCC 3502 5186786 YP_001255030.1 CDS sigG NC_009495.1 2670357 2671130 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed after engulfment; this factor is involved in the transcription of small acid-soluble proteins involved in protecting the forespore chromatin; sporulation sigma factor SigG complement(2670357..2671130) Clostridium botulinum A str. ATCC 3502 5186787 YP_001255031.1 CDS sigE NC_009495.1 2671205 2671912 R sigma-29; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell at the onset of sporulation; sporulation sigma factor SigE complement(2671205..2671912) Clostridium botulinum A str. ATCC 3502 5187963 YP_001255032.1 CDS spoIIGA NC_009495.1 2671924 2672721 R sporulation factor SpoIIGA complement(2671924..2672721) Clostridium botulinum A str. ATCC 3502 5186789 YP_001255033.1 CDS ftsZ NC_009495.1 2673034 2674143 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(2673034..2674143) Clostridium botulinum A str. ATCC 3502 5186790 YP_001255034.1 CDS divA NC_009495.1 2674166 2675419 R cell division protein FtsA complement(2674166..2675419) Clostridium botulinum A str. ATCC 3502 5186791 YP_001255035.1 CDS CBO2537 NC_009495.1 2675576 2676850 R glycosyl transferase family protein complement(2675576..2676850) Clostridium botulinum A str. ATCC 3502 5186792 YP_001255036.1 CDS CBO2538 NC_009495.1 2677288 2677431 D . Doubtful CDS; hypothetical protein 2677288..2677431 Clostridium botulinum A str. ATCC 3502 5186793 YP_001255037.1 CDS CBO2539 NC_009495.1 2677509 2678561 R twitching motility protein complement(2677509..2678561) Clostridium botulinum A str. ATCC 3502 5186794 YP_001255038.1 CDS CBO2540 NC_009495.1 2678563 2679339 R shikimate 5-dehydrogenase complement(2678563..2679339) Clostridium botulinum A str. ATCC 3502 5187986 YP_001255039.1 CDS sigK NC_009495.1 2679478 2680182 R sigma-28; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell after engulfment; sporulation sigma factor SigK complement(2679478..2680182) Clostridium botulinum A str. ATCC 3502 5186796 YP_001255040.1 CDS CBO2542 NC_009495.1 2680608 2680787 R hypothetical protein complement(2680608..2680787) Clostridium botulinum A str. ATCC 3502 5186797 YP_001255041.1 CDS CBO2543 NC_009495.1 2681087 2681197 R . Doubtful CDS; hypothetical protein complement(2681087..2681197) Clostridium botulinum A str. ATCC 3502 5186798 YP_001255042.1 CDS CBO2544 NC_009495.1 2681221 2681358 R N-terminus is similar to the N-terminal region of Clostridium perfringens hypothetical protein CPE1280 SWALL:Q8XKW2 (EMBL:AP003189) (50 aa) fasta scores: E(): 0.0079, 53.12 38d in 32 aa; hypothetical protein complement(2681221..2681358) Clostridium botulinum A str. ATCC 3502 5186799 YP_001255043.1 CDS CBO2545 NC_009495.1 2682559 2682729 D hypothetical protein 2682559..2682729 Clostridium botulinum A str. ATCC 3502 5187512 YP_001255044.1 CDS CBO2546 NC_009495.1 2683075 2683743 R Also similar to the upstream CDS CBO2547 (34.9 id); hypothetical protein complement(2683075..2683743) Clostridium botulinum A str. ATCC 3502 5187972 YP_001255045.1 CDS CBO2547 NC_009495.1 2683822 2684295 R Possible alternative translational start site; Also similar to the downstream CDS CBO2546 (34.9 id); hypothetical protein complement(2683822..2684295) Clostridium botulinum A str. ATCC 3502 5186802 YP_001255046.1 CDS CBO2548 NC_009495.1 2685351 2685635 R hypothetical protein complement(2685351..2685635) Clostridium botulinum A str. ATCC 3502 5186803 YP_001255047.1 CDS CBO2549 NC_009495.1 2685646 2686398 R Similar to Lactobacillus plantarum prophage LP1 protein 19 LP_0642 SWALL:Q88YV0 (EMBL:AL935253) (286 aa) fasta scores: E(): 2.4e-33, 38.43 38d in 268 aa. Possible alternative translational start si; hypothetical protein complement(2685646..2686398) Clostridium botulinum A str. ATCC 3502 5187486 YP_001255048.1 CDS CBO2550 NC_009495.1 2686430 2687233 R Also similar to N-terminal region of CBO0479 (82.8 id); recombinase, phage RecT family complement(2686430..2687233) Clostridium botulinum A str. ATCC 3502 5186805 YP_001255049.1 CDS CBO2553 NC_009495.1 2688251 2689921 R Weakly similar to the N-terminal regioon of Bacillus subtilis stage V sporulation protein D SpoVD or BSU15170 SWALL:SP5D_BACSU (SWALL:Q03524) (645 aa) fasta scores: E(): 1.8e-16, 26.78 38d in 575 aa. Similar to Clostridium tetani penicillin-binding protein 2 CTC01065 SWALL:Q896E2 (EMBL:AE015939) (550 aa) fasta scores: E(): 2.6e-80, 44.54 38d in 559 aa; penicillin-binding protein complement(2688251..2689921) Clostridium botulinum A str. ATCC 3502 5187313 YP_001255050.1 CDS udk NC_009495.1 2690007 2690627 R functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase complement(2690007..2690627) Clostridium botulinum A str. ATCC 3502 5187655 YP_001255051.1 CDS CBO2555 NC_009495.1 2690775 2692001 R peptidase, U32 family complement(2690775..2692001) Clostridium botulinum A str. ATCC 3502 5186810 YP_001255052.1 CDS CBO2556 NC_009495.1 2691994 2692650 R O-methyltransferase complement(2691994..2692650) Clostridium botulinum A str. ATCC 3502 5186811 YP_001255053.1 CDS CBO2557 NC_009495.1 2692733 2693764 R hypothetical protein complement(2692733..2693764) Clostridium botulinum A str. ATCC 3502 5186812 YP_001255054.1 CDS bipA NC_009495.1 2693842 2695668 R GTP-binding protein TypA complement(2693842..2695668) Clostridium botulinum A str. ATCC 3502 5186813 YP_001255055.1 CDS CBO2559 NC_009495.1 2696312 2698015 R RNA-metabolizing metallo-beta-lactamase complement(2696312..2698015) Clostridium botulinum A str. ATCC 3502 5186814 YP_001255056.1 CDS fur NC_009495.1 2698069 2698521 R FUR family transcriptional regulator complement(2698069..2698521) Clostridium botulinum A str. ATCC 3502 5186815 YP_001255057.1 CDS CBO2561 NC_009495.1 2698643 2698897 R hypothetical protein complement(2698643..2698897) Clostridium botulinum A str. ATCC 3502 5186816 YP_001255058.1 CDS CBO2562 NC_009495.1 2698911 2699324 R similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein complement(2698911..2699324) Clostridium botulinum A str. ATCC 3502 5186817 YP_001255059.1 CDS CBO2563 NC_009495.1 2699531 2699782 R hypothetical protein complement(2699531..2699782) Clostridium botulinum A str. ATCC 3502 5186818 YP_001255060.1 CDS alaS NC_009495.1 2699897 2702536 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(2699897..2702536) Clostridium botulinum A str. ATCC 3502 5186819 YP_001255061.1 CDS CBO2565 NC_009495.1 2703035 2704063 R hypothetical protein complement(2703035..2704063) Clostridium botulinum A str. ATCC 3502 5186820 YP_001255062.1 CDS CBO2566 NC_009495.1 2704076 2704564 R PRC-barrel domain-containing protein complement(2704076..2704564) Clostridium botulinum A str. ATCC 3502 5186821 YP_001255063.1 CDS CBO2567 NC_009495.1 2704746 2705174 R Similar to the N-terminal region of Azotobacter vinelandii nitrogen fixation protein NifU SWALL:NIFU_AZOVI (SWALL:P05340) (312 aa) fasta scores: E(): 1e-21, 52.94 id in 119 aa. Full length CDS is similar to Clostridium perfringens probable nitrogen fixation protein NifU or CPE1784 SWALL:Q8XJH2 (EMBL:AP003191) (142 aa) fasta scores: E(): 1.3e-45, 82.27 38d in 141 aa; iron-sulfur cluster assembly protein complement(2704746..2705174) Clostridium botulinum A str. ATCC 3502 5187115 YP_001255064.1 CDS iscS NC_009495.1 2705176 2706369 R cysteine desulfurase complement(2705176..2706369) Clostridium botulinum A str. ATCC 3502 5187118 YP_001255065.1 CDS CBO2569 NC_009495.1 2706362 2706808 R transcriptional regulator complement(2706362..2706808) Clostridium botulinum A str. ATCC 3502 5186824 YP_001255066.1 CDS CBO2570 NC_009495.1 2707028 2708278 R recombination factor protein RarA complement(2707028..2708278) Clostridium botulinum A str. ATCC 3502 5187828 YP_001255067.1 CDS CBO2571 NC_009495.1 2708676 2709443 R histidinol-phosphatase complement(2708676..2709443) Clostridium botulinum A str. ATCC 3502 5186826 YP_001255068.1 CDS CBO2572 NC_009495.1 2709810 2710718 R auxin efflux carrier family protein complement(2709810..2710718) Clostridium botulinum A str. ATCC 3502 5186827 YP_001255069.1 CDS CBO2573 NC_009495.1 2710826 2711692 R DegV family protein complement(2710826..2711692) Clostridium botulinum A str. ATCC 3502 5186828 YP_001255070.1 CDS CBO2574 NC_009495.1 2712020 2712604 D hypothetical protein 2712020..2712604 Clostridium botulinum A str. ATCC 3502 5186829 YP_001255071.1 CDS CBO2575 NC_009495.1 2712856 2713845 R catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase complement(2712856..2713845) Clostridium botulinum A str. ATCC 3502 5186830 YP_001255072.1 CDS CBO2576 NC_009495.1 2713967 2715334 R amino acid transporter protein complement(2713967..2715334) Clostridium botulinum A str. ATCC 3502 5186831 YP_001255073.1 CDS CBO2577 NC_009495.1 2716079 2717413 R amino acid transporter protein complement(2716079..2717413) Clostridium botulinum A str. ATCC 3502 5186832 YP_001255074.1 CDS CBO2578 NC_009495.1 2717790 2718443 D hypothetical protein 2717790..2718443 Clostridium botulinum A str. ATCC 3502 5187218 YP_001255075.1 CDS CBO2579 NC_009495.1 2718581 2719057 R copper amine oxidase domain-containing protein complement(2718581..2719057) Clostridium botulinum A str. ATCC 3502 5186834 YP_001255076.1 CDS purL NC_009495.1 2719421 2723086 R phosphoribosylformylglycinamidine synthase complement(2719421..2723086) Clostridium botulinum A str. ATCC 3502 5186835 YP_001255077.1 CDS CBO2581 NC_009495.1 2723381 2724730 R MATE efflux family protein complement(2723381..2724730) Clostridium botulinum A str. ATCC 3502 5187545 YP_001255078.1 CDS CBO2582 NC_009495.1 2724727 2727204 R N-terminus is similar to the N-terminal region of Escherichia coli phosphoenolpyruvate synthase PpsA or Pps or b1702 SWALL:PPSA_ECOLI (SWALL:P23538) (791 aa) fasta scores: E(): 1.8e-22, 36.79 38d in 337 aa. Full length CDS is similar to Bacillus cereus phosphoenolpyruvate synthase BC3087 SWALL:Q81BR3 (EMBL:AE017008) (868 aa) fasta scores: E(): 6.8e-35, 29.98 38d in 877 aa; phosphoenolpyruvate synthase complement(2724727..2727204) Clostridium botulinum A str. ATCC 3502 5187995 YP_001255079.1 CDS CBO2583 NC_009495.1 2727209 2727484 R acyl carrier protein complement(2727209..2727484) Clostridium botulinum A str. ATCC 3502 5186838 YP_001255080.1 CDS CBO2584 NC_009495.1 2727490 2729028 R acyl-CoA synthetase complement(2727490..2729028) Clostridium botulinum A str. ATCC 3502 5186839 YP_001255081.1 CDS CBO2585 NC_009495.1 2729045 2730055 R 3-oxoacyl-ACP synthase complement(2729045..2730055) Clostridium botulinum A str. ATCC 3502 5186840 YP_001255082.1 CDS CBO2586 NC_009495.1 2730064 2730921 R bacT protein complement(2730064..2730921) Clostridium botulinum A str. ATCC 3502 5186841 YP_001255083.1 CDS CBO2587 NC_009495.1 2730962 2732791 R Similar to an internal region of Bacillus licheniformis bacitracin synthetase 1 BacA SWALL:BACA_BACLI (SWALL:O68006) (5255 aa) fasta scores: E(): 4.3e-49, 33.15 38d in 561 aa; nonribosomal peptide synthetase complement(2730962..2732791) Clostridium botulinum A str. ATCC 3502 5187994 YP_001255084.1 CDS CBO2588 NC_009495.1 2732832 2733344 R GNAT family acetyltransferase complement(2732832..2733344) Clostridium botulinum A str. ATCC 3502 5186843 YP_001255085.1 CDS CBO2589 NC_009495.1 2733348 2733596 R acyl carrier protein complement(2733348..2733596) Clostridium botulinum A str. ATCC 3502 5187311 YP_001255086.1 CDS CBO2590 NC_009495.1 2733605 2734621 R hypothetical protein complement(2733605..2734621) Clostridium botulinum A str. ATCC 3502 5186845 YP_001255087.1 CDS CBO2591 NC_009495.1 2734618 2735811 R Poor database matches. C-terminus is weakly similar to the C-terminal region of Methanococcus maripaludis seryl-tRNA synthetase SerS or MMP0879 SWALL:SYS_METMP (SWALL:O30520) (514 aa) fasta scores: E(): 5.2e-12, 22.86 id in 363 aa; seryl-tRNA synthetase complement(2734618..2735811) Clostridium botulinum A str. ATCC 3502 5187612 YP_001255088.1 CDS CBO2592 NC_009495.1 2735830 2736570 R C-terminal region is weakly similar to Bacillus brevis 4'-phosphopantetheinyl transferase Gsp SWALL:GSP_BACBR (SWALL:P40683) (237 aa) fasta scores: E(): 2.2e-06, 28.57 38d in 203 aa. Possible alternative translational start site; hypothetical protein complement(2735830..2736570) Clostridium botulinum A str. ATCC 3502 5187021 YP_001255089.1 CDS arcB NC_009495.1 2737036 2738037 R catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase complement(2737036..2738037) Clostridium botulinum A str. ATCC 3502 5186848 YP_001255090.1 CDS arcC NC_009495.1 2738132 2739076 R catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase complement(2738132..2739076) Clostridium botulinum A str. ATCC 3502 5187009 YP_001255091.1 CDS glyA NC_009495.1 2739640 2740881 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(2739640..2740881) Clostridium botulinum A str. ATCC 3502 5186850 YP_001255092.1 CDS CBO2596 NC_009495.1 2741055 2741825 D hypothetical protein 2741055..2741825 Clostridium botulinum A str. ATCC 3502 5186851 YP_001255093.1 CDS CBO2597 NC_009495.1 2741822 2742310 D hypothetical protein 2741822..2742310 Clostridium botulinum A str. ATCC 3502 5186852 YP_001255094.1 CDS CBO2598 NC_009495.1 2742377 2742646 R hypothetical protein complement(2742377..2742646) Clostridium botulinum A str. ATCC 3502 5187696 YP_001255095.1 CDS CBO2599 NC_009495.1 2742847 2743671 R HAD-superfamily hydrolase complement(2742847..2743671) Clostridium botulinum A str. ATCC 3502 5186854 YP_001255096.1 CDS CBO2600 NC_009495.1 2743784 2744260 D lipoprotein 2743784..2744260 Clostridium botulinum A str. ATCC 3502 5186855 YP_001255097.1 CDS CBO2601 NC_009495.1 2744671 2749536 D to the full length CDS; hypothetical protein 2744671..2749536 Clostridium botulinum A str. ATCC 3502 5186856 YP_001255098.1 CDS CBO2602 NC_009495.1 2749613 2750836 D Weakly similar to many L-lactate dehydrogenases. Possible alternative translational start sites downstream of the current one.; hypothetical protein 2749613..2750836 Clostridium botulinum A str. ATCC 3502 5187354 YP_001255099.1 CDS CBO2603 NC_009495.1 2750990 2752045 D to the full length CDS. C-terminal region is similar to many proteins,including Lactobacillus plantarum hypothetical protein LP_0490 SWALL:Q88Z69 (EMBL:AL935253) (184 aa) fasta scores: E(): 0.011, 26.34 38d in 186 aa. Possible alternative translational start sites; hypothetical protein 2750990..2752045 Clostridium botulinum A str. ATCC 3502 5186858 YP_001255100.1 CDS CBO2604 NC_009495.1 2752237 2753076 D Similar to Clostridium acetobutylicum predicted metal-dependent phosphoesterase CAC1092 SWALL:Q97K29 (EMBL:AE007625) (274 aa) fasta scores: E(): 3.9e-51,52.38 38d in 273 aa. CDS contains a rare AUU translation start codon; hypothetical protein 2752237..2753076 Clostridium botulinum A str. ATCC 3502 5187396 YP_001255101.1 CDS CBO2605 NC_009495.1 2753506 2754909 R catalyzes the removal of amino acids from the N termini of peptides; aminopeptidase complement(2753506..2754909) Clostridium botulinum A str. ATCC 3502 5187353 YP_001255102.1 CDS CBO2606 NC_009495.1 2755032 2755967 R magnesium/cobalt transporter CorA complement(2755032..2755967) Clostridium botulinum A str. ATCC 3502 5186861 YP_001255103.1 CDS CBO2607 NC_009495.1 2756393 2756947 R 5-formyltetrahydrofolate cyclo-ligase complement(2756393..2756947) Clostridium botulinum A str. ATCC 3502 5186862 YP_001255104.1 CDS CBO2608 NC_009495.1 2756940 2757863 R catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase complement(2756940..2757863) Clostridium botulinum A str. ATCC 3502 5186863 YP_001255105.1 CDS CBO2609 NC_009495.1 2757895 2758083 R hypothetical protein complement(2757895..2758083) Clostridium botulinum A str. ATCC 3502 5186864 YP_001255106.1 CDS CBO2610 NC_009495.1 2758254 2758991 R DedA family protein complement(2758254..2758991) Clostridium botulinum A str. ATCC 3502 5187089 YP_001255107.1 CDS CBO2611 NC_009495.1 2758957 2759676 R Similar to Clostridium perfringens hypothetical protein CPE1612 SWALL:Q8XJZ1 (EMBL:AP003191) (217 aa) fasta scores: E(): 9e-33, 48.84 38d in 217 aa. CDS is extended at the C-terminus in comparison to orthologues,possible frame shift mutation in the C-terminal region; DedA family protein complement(2758957..2759676) Clostridium botulinum A str. ATCC 3502 5186866 YP_001255108.1 CDS CBO2612 NC_009495.1 2759785 2760930 R hypothetical protein complement(2759785..2760930) Clostridium botulinum A str. ATCC 3502 5186867 YP_001255109.1 CDS CBO2613 NC_009495.1 2760930 2761916 R hypothetical protein complement(2760930..2761916) Clostridium botulinum A str. ATCC 3502 5186868 YP_001255110.1 CDS CBO2613A NC_009495.1 2761906 2762589 R N-terminus is similar to thye N-terminal region of Streptomyces coelicolor hypothetical protein SCO3464 or SCE46.21 SWALL:Q9RKG8 (EMBL:AL939116) (210 aa) fasta scores: E(): 1.1e-13, 30.92 38d in 194 aa; hypothetical protein complement(2761906..2762589) Clostridium botulinum A str. ATCC 3502 5204297 YP_001255111.1 CDS CBO2614 NC_009495.1 2762607 2763281 R glycosyl transferase family protein complement(2762607..2763281) Clostridium botulinum A str. ATCC 3502 5187453 YP_001255112.1 CDS CBO2615 NC_009495.1 2763468 2764442 D to the full length CDS. C-terminal region is similar to many proteins,including Rattus norvegicus thiosulfate sulfurtransferase TST SWALL:THTR_RAT (SWALL:P24329) (295 aa) fasta scores: E(): 3.2e-14, 25 38d in 276 aa; thiosulfate sulfurtransferase 2763468..2764442 Clostridium botulinum A str. ATCC 3502 5186870 YP_001255113.1 CDS glpX NC_009495.1 2764676 2765650 R type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II complement(2764676..2765650) Clostridium botulinum A str. ATCC 3502 5187666 YP_001255114.1 CDS CBO2617 NC_009495.1 2766134 2766310 D similar to the upstream CDS CBO2693 (30.4 38d) and CBO2692 (26.6 38d); hypothetical protein 2766134..2766310 Clostridium botulinum A str. ATCC 3502 5186872 YP_001255115.1 CDS CBO2618 NC_009495.1 2766342 2766740 R hypothetical protein complement(2766342..2766740) Clostridium botulinum A str. ATCC 3502 5187179 YP_001255116.1 CDS CBO2619 NC_009495.1 2767195 2768364 R metallo-beta-lactamase/flavodoxin complement(2767195..2768364) Clostridium botulinum A str. ATCC 3502 5187974 YP_001255117.1 CDS CBO2620 NC_009495.1 2768911 2769417 R hypothetical protein complement(2768911..2769417) Clostridium botulinum A str. ATCC 3502 5186875 YP_001255118.1 CDS CBO2621 NC_009495.1 2770469 2771332 R nucleoside hydrolase, IUNH family complement(2770469..2771332) Clostridium botulinum A str. ATCC 3502 5186876 YP_001255119.1 CDS def NC_009495.1 2771350 2771820 R peptide deformylase complement(2771350..2771820) Clostridium botulinum A str. ATCC 3502 5187454 YP_001255120.1 CDS ntpD NC_009495.1 2772103 2772762 R produces ATP from ADP in the presence of a proton gradient across the membrane; the D subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit D complement(2772103..2772762) Clostridium botulinum A str. ATCC 3502 5187775 YP_001255121.1 CDS ntpB NC_009495.1 2772782 2774167 R produces ATP from ADP in the presence of a proton gradient across the membrane; the B subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit B complement(2772782..2774167) Clostridium botulinum A str. ATCC 3502 5187819 YP_001255122.1 CDS ntpA NC_009495.1 2774160 2775938 R produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit A complement(2774160..2775938) Clostridium botulinum A str. ATCC 3502 5187881 YP_001255123.1 CDS ntpG NC_009495.1 2775952 2776260 R produces ATP from ADP in the presence of a proton gradient across the membrane; the F subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit F complement(2775952..2776260) Clostridium botulinum A str. ATCC 3502 5187575 YP_001255124.1 CDS ntpC NC_009495.1 2776253 2777254 R produces ATP from ADP in the presence of a proton gradient across the membrane; the C subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit C complement(2776253..2777254) Clostridium botulinum A str. ATCC 3502 5187461 YP_001255125.1 CDS ntpE NC_009495.1 2777269 2777871 R V-type ATPase, E subunit complement(2777269..2777871) Clostridium botulinum A str. ATCC 3502 5186882 YP_001255126.1 CDS ntpK NC_009495.1 2777907 2778383 R produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits; V-type ATP synthase subunit K complement(2777907..2778383) Clostridium botulinum A str. ATCC 3502 5186883 YP_001255127.1 CDS ntpI NC_009495.1 2778396 2780357 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I is part of the membrane proton channel.; V-type ATP synthase subunit I complement(2778396..2780357) Clostridium botulinum A str. ATCC 3502 5187138 YP_001255128.1 CDS CBO2629A NC_009495.1 2780344 2780670 R V-type ATPase, G subunit complement(2780344..2780670) Clostridium botulinum A str. ATCC 3502 5204348 YP_001255129.1 CDS CBO2630 NC_009495.1 2780976 2782655 R B12-binding Fe-S oxidoreductase complement(2780976..2782655) Clostridium botulinum A str. ATCC 3502 5186885 YP_001255130.1 CDS CBO2631 NC_009495.1 2782630 2783205 R hypothetical protein complement(2782630..2783205) Clostridium botulinum A str. ATCC 3502 5187178 YP_001255131.1 CDS CBO2632 NC_009495.1 2783377 2784096 R phospholipase C complement(2783377..2784096) Clostridium botulinum A str. ATCC 3502 5187383 YP_001255132.1 CDS CBO2633 NC_009495.1 2784118 2785317 R hypothetical protein complement(2784118..2785317) Clostridium botulinum A str. ATCC 3502 5186888 YP_001255133.1 CDS CBO2634 NC_009495.1 2785355 2787901 R calcium-translocating P-type ATPase complement(2785355..2787901) Clostridium botulinum A str. ATCC 3502 5186889 YP_001255134.1 CDS CBO2635 NC_009495.1 2788220 2789863 D catalyzes the hydrolysis of pyrophosphate to phosphate; manganese-dependent inorganic pyrophosphatase 2788220..2789863 Clostridium botulinum A str. ATCC 3502 5187432 YP_001255135.1 CDS CBO2636 NC_009495.1 2790079 2790657 R hypothetical protein complement(2790079..2790657) Clostridium botulinum A str. ATCC 3502 5186891 YP_001255136.1 CDS flgG NC_009495.1 2790985 2791776 R makes up the distal portion of the flagellar basal body rod; the Clostridia have 2 adjacent copies of the FlgG gene; flagellar basal body rod protein FlgG complement(2790985..2791776) Clostridium botulinum A str. ATCC 3502 5187933 YP_001255137.1 CDS flgG NC_009495.1 2791831 2792598 R makes up the distal portion of the flagellar basal body rod; the Clostridia have two adjacent copies of the FlgG gene; flagellar basal body rod protein FlgG complement(2791831..2792598) Clostridium botulinum A str. ATCC 3502 5187207 YP_001255138.1 CDS CBO2639 NC_009495.1 2792664 2792780 R hypothetical protein complement(2792664..2792780) Clostridium botulinum A str. ATCC 3502 5186894 YP_001255139.1 CDS CBO2640 NC_009495.1 2792858 2793496 R Similar in part to Clostridium acetobutylicum hypothetical protein CAC2142 SWALL:Q97H71 (EMBL:AE007715) (148 aa) fasta scores: E(): 6.3e-05, 33.17 38d in 211 aa. CDS contains additional internal amino acids relative to similar proteins; hypothetical protein complement(2792858..2793496) Clostridium botulinum A str. ATCC 3502 5186895 YP_001255140.1 CDS sigD NC_009495.1 2793525 2794253 R RNA polymerase sigma factor for flagellar operon FliA complement(2793525..2794253) Clostridium botulinum A str. ATCC 3502 5187409 YP_001255141.1 CDS CBO2642 NC_009495.1 2794267 2794926 R hypothetical protein complement(2794267..2794926) Clostridium botulinum A str. ATCC 3502 5187858 YP_001255142.1 CDS CBO2643 NC_009495.1 2794941 2795801 R flagellar biosynthesis protein FlhG complement(2794941..2795801) Clostridium botulinum A str. ATCC 3502 5187664 YP_001255143.1 CDS flhF NC_009495.1 2795795 2797021 R positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF complement(2795795..2797021) Clostridium botulinum A str. ATCC 3502 5186899 YP_001255144.1 CDS flhA NC_009495.1 2797018 2799084 R membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA complement(2797018..2799084) Clostridium botulinum A str. ATCC 3502 5186900 YP_001255145.1 CDS CBO2646 NC_009495.1 2799112 2800941 R FlhB is a membrane protein responsible for substrate specificity in switching from rod/hook-type export to filament-type export; FliR is required for export of flagellar proteins, although a specific role has not yet been determined; bifunctional flagellar biosynthesis protein FliR/FlhB complement(2799112..2800941) Clostridium botulinum A str. ATCC 3502 5187546 YP_001255146.1 CDS fliQ NC_009495.1 2800975 2801244 R flagellar biosynthesis protein FliQ complement(2800975..2801244) Clostridium botulinum A str. ATCC 3502 5187949 YP_001255147.1 CDS fliP NC_009495.1 2801256 2802032 R FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP complement(2801256..2802032) Clostridium botulinum A str. ATCC 3502 5186903 YP_001255148.1 CDS CBO2649 NC_009495.1 2802016 2802423 R flagellar biosynthesis domain-containing protein complement(2802016..2802423) Clostridium botulinum A str. ATCC 3502 5186904 YP_001255149.1 CDS fliL NC_009495.1 2802496 2803017 R flagellar basal body-associated protein complement(2802496..2803017) Clostridium botulinum A str. ATCC 3502 5186905 YP_001255150.1 CDS motB NC_009495.1 2803014 2803757 R chemotaxis protein MotB complement(2803014..2803757) Clostridium botulinum A str. ATCC 3502 5186906 YP_001255151.1 CDS motA NC_009495.1 2803750 2804562 R chemotaxis MotA protein complement(2803750..2804562) Clostridium botulinum A str. ATCC 3502 5186907 YP_001255152.1 CDS CBO2653 NC_009495.1 2804559 2804768 R flagellar protein FlbD complement(2804559..2804768) Clostridium botulinum A str. ATCC 3502 5186908 YP_001255153.1 CDS flgE NC_009495.1 2805002 2806039 R flagellar hook protein flgE complement(2805002..2806039) Clostridium botulinum A str. ATCC 3502 5186909 YP_001255154.1 CDS CBO2655 NC_009495.1 2806121 2806540 R flagellar operon protein complement(2806121..2806540) Clostridium botulinum A str. ATCC 3502 5187825 YP_001255155.1 CDS flgD NC_009495.1 2806555 2807352 R flagellar hook capping protein complement(2806555..2807352) Clostridium botulinum A str. ATCC 3502 5186911 YP_001255156.1 CDS CBO2657 NC_009495.1 2807382 2808770 R flagellar hook-length control protein complement(2807382..2808770) Clostridium botulinum A str. ATCC 3502 5187356 YP_001255157.1 CDS fliJ NC_009495.1 2808776 2809213 R flagellar protein FliJ complement(2808776..2809213) Clostridium botulinum A str. ATCC 3502 5187544 YP_001255158.1 CDS fliI NC_009495.1 2809317 2810633 R flagellar protein export ATPase FliI complement(2809317..2810633) Clostridium botulinum A str. ATCC 3502 5186914 YP_001255159.1 CDS fliH NC_009495.1 2810673 2811449 R Note the overlap with the upstream CDS.; flagellar assembly protein FliH complement(2810673..2811449) Clostridium botulinum A str. ATCC 3502 5186915 YP_001255160.1 CDS fliG NC_009495.1 2811433 2812446 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G complement(2811433..2812446) Clostridium botulinum A str. ATCC 3502 5186916 YP_001255161.1 CDS fliF NC_009495.1 2812453 2814033 R the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein complement(2812453..2814033) Clostridium botulinum A str. ATCC 3502 5186917 YP_001255162.1 CDS fliE NC_009495.1 2814049 2814363 R forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE complement(2814049..2814363) Clostridium botulinum A str. ATCC 3502 5186918 YP_001255163.1 CDS flgC NC_009495.1 2814375 2814809 R with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC complement(2814375..2814809) Clostridium botulinum A str. ATCC 3502 5186919 YP_001255164.1 CDS flgB NC_009495.1 2814907 2815308 R with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal-body rod protein FlgB complement(2814907..2815308) Clostridium botulinum A str. ATCC 3502 5186920 YP_001255165.1 CDS CBO2666 NC_009495.1 2815880 2816734 R flagellin complement(2815880..2816734) Clostridium botulinum A str. ATCC 3502 5186921 YP_001255166.1 CDS CBO2667 NC_009495.1 2816768 2816884 R doubtful CDS; hypothetical protein complement(2816768..2816884) Clostridium botulinum A str. ATCC 3502 5187492 YP_001255167.1 CDS CBO2668 NC_009495.1 2816878 2817246 R hypothetical protein complement(2816878..2817246) Clostridium botulinum A str. ATCC 3502 5186923 YP_001255168.1 CDS argH NC_009495.1 2817786 2819108 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(2817786..2819108) Clostridium botulinum A str. ATCC 3502 5186924 YP_001255169.1 CDS argG NC_009495.1 2819130 2820323 R catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase complement(2819130..2820323) Clostridium botulinum A str. ATCC 3502 5186925 YP_001255170.1 CDS CBO2671 NC_009495.1 2820419 2820538 R hypothetical protein complement(2820419..2820538) Clostridium botulinum A str. ATCC 3502 5186926 YP_001255171.1 CDS CBO2672 NC_009495.1 2820618 2820956 R hypothetical protein complement(2820618..2820956) Clostridium botulinum A str. ATCC 3502 5187874 YP_001255172.1 CDS CBO2673 NC_009495.1 2820979 2821323 R hypothetical protein complement(2820979..2821323) Clostridium botulinum A str. ATCC 3502 5186928 YP_001255173.1 CDS CBO2674 NC_009495.1 2821503 2822936 R cardiolipin synthetase complement(2821503..2822936) Clostridium botulinum A str. ATCC 3502 5186929 YP_001255174.1 CDS CBO2675 NC_009495.1 2823260 2824150 D hypothetical protein 2823260..2824150 Clostridium botulinum A str. ATCC 3502 5186930 YP_001255175.1 CDS CBO2676 NC_009495.1 2824325 2824510 R hypothetical protein complement(2824325..2824510) Clostridium botulinum A str. ATCC 3502 5186931 YP_001255176.1 CDS CBO2677 NC_009495.1 2824793 2825242 R VanZ family protein complement(2824793..2825242) Clostridium botulinum A str. ATCC 3502 5186932 YP_001255177.1 CDS CBO2678 NC_009495.1 2825493 2826923 R polysaccharide biosynthesis protein complement(2825493..2826923) Clostridium botulinum A str. ATCC 3502 5186933 YP_001255178.1 CDS CBO2679 NC_009495.1 2826963 2827880 R UDP-glucose 4-epimerase complement(2826963..2827880) Clostridium botulinum A str. ATCC 3502 5186934 YP_001255179.1 CDS CBO2680 NC_009495.1 2827909 2828976 R neuB family protein complement(2827909..2828976) Clostridium botulinum A str. ATCC 3502 5186935 YP_001255180.1 CDS CBO2681 NC_009495.1 2829008 2830669 R Note that the C_terminal region is most similar to the Clostridial spore coat proteins; cytidylyltransferase domain-containing protein complement(2829008..2830669) Clostridium botulinum A str. ATCC 3502 5186936 YP_001255181.1 CDS CBO2682 NC_009495.1 2830684 2831853 R hypothetical protein complement(2830684..2831853) Clostridium botulinum A str. ATCC 3502 5187249 YP_001255182.1 CDS CBO2683 NC_009495.1 2831887 2832840 R exopolysaccharide biosynthesis protein complement(2831887..2832840) Clostridium botulinum A str. ATCC 3502 5187252 YP_001255183.1 CDS CBO2684 NC_009495.1 2832867 2833637 R exopolysaccharide biosynthesis protein complement(2832867..2833637) Clostridium botulinum A str. ATCC 3502 5186939 YP_001255184.1 CDS CBO2685 NC_009495.1 2833637 2834737 R UDP-galactopyranose mutase complement(2833637..2834737) Clostridium botulinum A str. ATCC 3502 5186940 YP_001255185.1 CDS CBO2686 NC_009495.1 2834842 2835519 R UDP-phosphate galactosephosphotransferase complement(2834842..2835519) Clostridium botulinum A str. ATCC 3502 5186941 YP_001255186.1 CDS CBO2687 NC_009495.1 2835730 2836440 R capsular exopolysaccharide family protein complement(2835730..2836440) Clostridium botulinum A str. ATCC 3502 5187917 YP_001255187.1 CDS CBO2688 NC_009495.1 2836459 2837232 R exopolysaccharide biosynthesis protein complement(2836459..2837232) Clostridium botulinum A str. ATCC 3502 5186943 YP_001255188.1 CDS CBO2689 NC_009495.1 2837248 2837925 R capsular polysaccharide biosynthsis protein complement(2837248..2837925) Clostridium botulinum A str. ATCC 3502 5186944 YP_001255189.1 CDS CBO2690 NC_009495.1 2837960 2838922 R LytR family transcriptional regulator complement(2837960..2838922) Clostridium botulinum A str. ATCC 3502 5186945 YP_001255190.1 CDS CBO2691 NC_009495.1 2839360 2839536 R hypothetical protein complement(2839360..2839536) Clostridium botulinum A str. ATCC 3502 5186946 YP_001255191.1 CDS CBO2692 NC_009495.1 2839665 2839844 R similar to the upstream CDS CBO2693 (59.6 38d) and CBO2617 (26.6 38d); hypothetical protein complement(2839665..2839844) Clostridium botulinum A str. ATCC 3502 5187015 YP_001255192.1 CDS CBO2693 NC_009495.1 2839959 2840126 R Similar to the downstream CDS CBO2692 (59.6 38d) and CBO2617 (30.4 38d); hypothetical protein complement(2839959..2840126) Clostridium botulinum A str. ATCC 3502 5186948 YP_001255193.1 CDS CBO2694 NC_009495.1 2840610 2841458 R methyl-accepting chemotaxis protein complement(2840610..2841458) Clostridium botulinum A str. ATCC 3502 5186949 YP_001255194.1 CDS CBO2695 NC_009495.1 2841535 2842353 R flagellin complement(2841535..2842353) Clostridium botulinum A str. ATCC 3502 5187737 YP_001255195.1 CDS CBO2696 NC_009495.1 2842538 2843035 R hypothetical protein complement(2842538..2843035) Clostridium botulinum A str. ATCC 3502 5186951 YP_001255196.1 CDS CBO2697 NC_009495.1 2843121 2844590 R hypothetical protein complement(2843121..2844590) Clostridium botulinum A str. ATCC 3502 5186952 YP_001255197.1 CDS CBO2698 NC_009495.1 2844606 2844716 R hypothetical protein complement(2844606..2844716) Clostridium botulinum A str. ATCC 3502 5187769 YP_001255198.1 CDS CBO2699 NC_009495.1 2844824 2845825 R hypothetical protein complement(2844824..2845825) Clostridium botulinum A str. ATCC 3502 5186954 YP_001255199.1 CDS CBO2700 NC_009495.1 2846322 2847326 R lipase/acylhydrolase complement(2846322..2847326) Clostridium botulinum A str. ATCC 3502 5186955 YP_001255200.1 CDS CBO2701 NC_009495.1 2847416 2848513 R hypothetical protein complement(2847416..2848513) Clostridium botulinum A str. ATCC 3502 5186956 YP_001255201.1 CDS CBO2702 NC_009495.1 2848530 2849708 R glycosyl transferase family protein complement(2848530..2849708) Clostridium botulinum A str. ATCC 3502 5187167 YP_001255202.1 CDS CBO2703 NC_009495.1 2849736 2850914 R glycosyl transferase family protein complement(2849736..2850914) Clostridium botulinum A str. ATCC 3502 5186958 YP_001255203.1 CDS CBO2704 NC_009495.1 2851019 2851546 R hypothetical protein complement(2851019..2851546) Clostridium botulinum A str. ATCC 3502 5186959 YP_001255204.1 CDS CBO2705 NC_009495.1 2851554 2852774 R glycosyl transferase family protein complement(2851554..2852774) Clostridium botulinum A str. ATCC 3502 5186960 YP_001255205.1 CDS CBO2706 NC_009495.1 2852800 2854797 R asparagine synthetase complement(2852800..2854797) Clostridium botulinum A str. ATCC 3502 5187824 YP_001255206.1 CDS CBO2707 NC_009495.1 2854834 2856255 R Weakly similar to the mentioned database matches; capsular polysaccharide synthesis protein complement(2854834..2856255) Clostridium botulinum A str. ATCC 3502 5187596 YP_001255207.1 CDS CBO2708 NC_009495.1 2856301 2857740 R Note the database similarities are weak and only to the C-terminal region; hypothetical protein complement(2856301..2857740) Clostridium botulinum A str. ATCC 3502 5204298 YP_001255208.1 CDS CBO2709 NC_009495.1 2857874 2858896 R methyltransferase complement(2857874..2858896) Clostridium botulinum A str. ATCC 3502 5204299 YP_001255209.1 CDS CBO2710 NC_009495.1 2858889 2860094 R glycosyl transferase family protein complement(2858889..2860094) Clostridium botulinum A str. ATCC 3502 5204300 YP_001255210.1 CDS CBO2711 NC_009495.1 2860181 2861488 R radical SAM superfamily protein complement(2860181..2861488) Clostridium botulinum A str. ATCC 3502 5204301 YP_001255211.1 CDS CBO2712 NC_009495.1 2861510 2862286 R hydroxylase complement(2861510..2862286) Clostridium botulinum A str. ATCC 3502 5204302 YP_001255212.1 CDS CBO2713 NC_009495.1 2862283 2863458 R methyltransferase complement(2862283..2863458) Clostridium botulinum A str. ATCC 3502 5204303 YP_001255213.1 CDS CBO2714 NC_009495.1 2863448 2864368 R CDP-4-dehydro-6-deoxy-D-gulose 4-reductase complement(2863448..2864368) Clostridium botulinum A str. ATCC 3502 5204304 YP_001255214.1 CDS CBO2715 NC_009495.1 2864365 2864898 R dTDP-4-dehydrorhamnose 3,5-epimerase complement(2864365..2864898) Clostridium botulinum A str. ATCC 3502 5204305 YP_001255215.1 CDS CBO2716 NC_009495.1 2864899 2866134 R methyltransferase complement(2864899..2866134) Clostridium botulinum A str. ATCC 3502 5204306 YP_001255216.1 CDS CBO2717 NC_009495.1 2866181 2867284 R radical SAM domain-containing protein complement(2866181..2867284) Clostridium botulinum A str. ATCC 3502 5204307 YP_001255217.1 CDS CBO2718 NC_009495.1 2867286 2868062 R glucose-1-phosphate cytidylyltransferase complement(2867286..2868062) Clostridium botulinum A str. ATCC 3502 5204308 YP_001255218.1 CDS CBO2719 NC_009495.1 2868081 2870492 R hypothetical protein complement(2868081..2870492) Clostridium botulinum A str. ATCC 3502 5204309 YP_001255219.1 CDS CBO2720 NC_009495.1 2870583 2871647 R N-acetylneuraminic acid synthase complement(2870583..2871647) Clostridium botulinum A str. ATCC 3502 5204310 YP_001255220.1 CDS CBO2721 NC_009495.1 2871777 2872532 R 3-deoxy-manno-octulosonate cytidylyltransferase complement(2871777..2872532) Clostridium botulinum A str. ATCC 3502 5204311 YP_001255221.1 CDS CBO2722 NC_009495.1 2872655 2873326 R hydrolase complement(2872655..2873326) Clostridium botulinum A str. ATCC 3502 5204312 YP_001255222.1 CDS CBO2723 NC_009495.1 2873366 2874394 R undetermined role; similar to CarB protein but much smaller; carbamoyl phosphate synthase-like protein complement(2873366..2874394) Clostridium botulinum A str. ATCC 3502 5204313 YP_001255223.1 CDS CBO2724 NC_009495.1 2874615 2875679 R dTDP-glucose 4,6-dehydratase complement(2874615..2875679) Clostridium botulinum A str. ATCC 3502 5204314 YP_001255224.1 CDS CBO2725 NC_009495.1 2875799 2876824 R Similar to the C-terminal region of Staphylococcus aureus capsular polysaccharide biosynthesis protein CapD SWALL:CAPD_STAAU (SWALL:P39853) (599 aa) fasta scores: E(): 3e-31, 37.5 38d in 336 aa, and to the full length Clostridium acetobutylicum predicted nucleoside-diphosphate sugar epimerase CAC2194 SWALL:Q97H20 (EMBL:AE007719) (340 aa) fasta scores: E(): 3.2e-81, 68.03 38d in 341 aa; polysaccharide biosynthesis protein complement(2875799..2876824) Clostridium botulinum A str. ATCC 3502 5204315 YP_001255225.1 CDS CBO2726 NC_009495.1 2876865 2878286 R Similar to the N-terminal region of Clostridium acetobutylicum glycosyltransferase fused to TPR-repeat domain CAC3308 SWALL:Q97E12 (EMBL:AE007827) (593 aa) fasta scores: E(): 7e-26, 32.49 38d in 514 aa; glycosyl transferase family protein complement(2876865..2878286) Clostridium botulinum A str. ATCC 3502 5204316 YP_001255226.1 CDS CBO2727 NC_009495.1 2878295 2878642 R hypothetical protein complement(2878295..2878642) Clostridium botulinum A str. ATCC 3502 5204317 YP_001255227.1 CDS CBO2728 NC_009495.1 2878646 2880361 R hypothetical protein complement(2878646..2880361) Clostridium botulinum A str. ATCC 3502 5204318 YP_001255228.1 CDS CBO2729 NC_009495.1 2880374 2882275 R Similar to Clostridium acetobutylicum glycosyltransferase fused to TRP-repeat domain cac3308 SWALL:Q97E12 (EMBL:AE007827) (593 aa) fasta scores: E(): 3.7e-26, 28.1 38d in 612 aa. CDS is extended at the C-terminus in comparison to C. acetobutylicum protein; glycosyltransferase complement(2880374..2882275) Clostridium botulinum A str. ATCC 3502 5204319 YP_001255229.1 CDS CBO2730 NC_009495.1 2882498 2883325 R Highly similar to the upstream CDS CBO2731 (98.9 id); flagellin complement(2882498..2883325) Clostridium botulinum A str. ATCC 3502 5204320 YP_001255230.1 CDS CBO2731 NC_009495.1 2883539 2884366 R Highly similar to the downstream CDS CBO2730 (98.9 id); flagellin complement(2883539..2884366) Clostridium botulinum A str. ATCC 3502 5204321 YP_001255231.1 CDS CBO2732 NC_009495.1 2884516 2884857 R hypothetical protein complement(2884516..2884857) Clostridium botulinum A str. ATCC 3502 5204322 YP_001255232.1 CDS fliD NC_009495.1 2884884 2887319 R C-terminal region is similar to Bacillus halodurans flagellar hook-associated protein 2 FliD or BH3614 SWALL:FLID_BACHD (SWALL:Q9K6W0) (532 aa) fasta scores: E(): 2.1e-14, 27.55 38d in 508 aa. Full length CDS is similar to Clostridium acetobutylicum flagellar hook-associated protein CAC2205 SWALL:Q97H10 (EMBL:AE007721) (638 aa) fasta scores: E(): 1e-23, 27.36 id in 826 aa; flagellar hook-associated protein 2 complement(2884884..2887319) Clostridium botulinum A str. ATCC 3502 5186407 YP_001255233.1 CDS fliS NC_009495.1 2887373 2887771 R flagellar protein FliS complement(2887373..2887771) Clostridium botulinum A str. ATCC 3502 5187292 YP_001255234.1 CDS CBO2735 NC_009495.1 2887799 2888098 R hypothetical protein complement(2887799..2888098) Clostridium botulinum A str. ATCC 3502 5184507 YP_001255235.1 CDS CBO2736 NC_009495.1 2888153 2888509 R flagellar protein FlaG complement(2888153..2888509) Clostridium botulinum A str. ATCC 3502 5186120 YP_001255236.1 CDS csrA NC_009495.1 2888525 2888743 R affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator complement(2888525..2888743) Clostridium botulinum A str. ATCC 3502 5184305 YP_001255237.1 CDS CBO2738 NC_009495.1 2888743 2889174 R binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW complement(2888743..2889174) Clostridium botulinum A str. ATCC 3502 5186937 YP_001255238.1 CDS flgL NC_009495.1 2889263 2890225 R flagellar hook-associated protein 3 complement(2889263..2890225) Clostridium botulinum A str. ATCC 3502 5187253 YP_001255239.1 CDS flgK NC_009495.1 2890243 2892111 R flagellar hook-associated protein FlgK complement(2890243..2892111) Clostridium botulinum A str. ATCC 3502 5186997 YP_001255240.1 CDS CBO2741 NC_009495.1 2892400 2892804 R flgN family protein complement(2892400..2892804) Clostridium botulinum A str. ATCC 3502 5186994 YP_001255241.1 CDS flgM NC_009495.1 2892804 2893085 R regulator of flagellin synthesis FlgM complement(2892804..2893085) Clostridium botulinum A str. ATCC 3502 5187240 YP_001255242.1 CDS cheD NC_009495.1 2893582 2894742 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein complement(2893582..2894742) Clostridium botulinum A str. ATCC 3502 5187239 YP_001255243.1 CDS fliM NC_009495.1 2894735 2895730 R flagellar motor switch protein FliM complement(2894735..2895730) Clostridium botulinum A str. ATCC 3502 5186188 YP_001255244.1 CDS CBO2745 NC_009495.1 2895758 2896153 R Similar to Clostridium tetani chemotaxis protein CTC01728 SWALL:Q893T1 (EMBL:AE015942) (134 aa) fasta scores: E(): 1.6e-30, 67.93 38d in 131 aa. Similar to an internal region of Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri chemotaxis protein CheW or b1887 or c2302 or z2941 or ecs2597 or sf1936 or s2027 SWALL:CHEW_ECOLI (SWALL:P07365) (167 aa) fasta scores: E(): 1.5e-08, 31.34 38d in 134 aa; chemotaxis protein CheW complement(2895758..2896153) Clostridium botulinum A str. ATCC 3502 5185505 YP_001255245.1 CDS cheB NC_009495.1 2896253 2896612 R chemotaxis protein CheY complement(2896253..2896612) Clostridium botulinum A str. ATCC 3502 5187001 YP_001255246.1 CDS cheC NC_009495.1 2896640 2897239 R chemotaxis protein CheC complement(2896640..2897239) Clostridium botulinum A str. ATCC 3502 5187006 YP_001255247.1 CDS cheA NC_009495.1 2897265 2899340 R chemotaxis protein CheA complement(2897265..2899340) Clostridium botulinum A str. ATCC 3502 5187003 YP_001255248.1 CDS cheR NC_009495.1 2899353 2900123 R chemotaxis protein CheR complement(2899353..2900123) Clostridium botulinum A str. ATCC 3502 5185504 YP_001255249.1 CDS cheB NC_009495.1 2900138 2901202 R protein-glutamate methylesterase CheB complement(2900138..2901202) Clostridium botulinum A str. ATCC 3502 5187002 YP_001255250.1 CDS cheD NC_009495.1 2901225 2901713 R catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD complement(2901225..2901713) Clostridium botulinum A str. ATCC 3502 5186187 YP_001255251.1 CDS cheW NC_009495.1 2901730 2902176 R chemotaxis protein CheW complement(2901730..2902176) Clostridium botulinum A str. ATCC 3502 5186938 YP_001255252.1 CDS CBO2753 NC_009495.1 2902192 2904225 R hypothetical protein complement(2902192..2904225) Clostridium botulinum A str. ATCC 3502 5186849 YP_001255253.1 CDS CBO2754 NC_009495.1 2904478 2906433 R C-terminal region is similar to Escherichia coli,Escherichia coli O6, and Escherichia coli O157:H7 PTS system, glucose-specific IIBC component PtsG or GlcA or Umg or b1101 or c1373 or z1740 or ecs1479 SWALL:PTGB_ECOLI (SWALL:P05053) (477 aa) fasta scores: E(): 2.6e-50, 42.25 id in 497 aa. Full length CDS is similar to Bacillus subtilis PTS system IIABC component YbfS or bsu02350 SWALL:YBFS_BACSU (SWALL:P39816) (631 aa) fasta scores: E(): 4e-56, 41.9 38d in 642 aa; PTS system glucose family transporter subunit IIABC complement(2904478..2906433) Clostridium botulinum A str. ATCC 3502 5186727 YP_001255254.1 CDS CBO2755 NC_009495.1 2906516 2907343 R BglG family transcriptional antiterminator complement(2906516..2907343) Clostridium botulinum A str. ATCC 3502 5185015 YP_001255255.1 CDS CBO2756 NC_009495.1 2907592 2908458 R Possible alternative translational start site; branched-chain amino acid aminotransferase complement(2907592..2908458) Clostridium botulinum A str. ATCC 3502 5184581 YP_001255256.1 CDS CBO2757 NC_009495.1 2908552 2909193 R HAD-superfamily hydrolase complement(2908552..2909193) Clostridium botulinum A str. ATCC 3502 5187598 YP_001255257.1 CDS CBO2758 NC_009495.1 2909450 2909851 R hypothetical protein complement(2909450..2909851) Clostridium botulinum A str. ATCC 3502 5187465 YP_001255258.1 CDS CBO2759 NC_009495.1 2910112 2910219 R . Doubtful CDS; hypothetical protein complement(2910112..2910219) Clostridium botulinum A str. ATCC 3502 5186947 YP_001255259.1 CDS nifJ2 NC_009495.1 2910494 2914072 R Also similar to CBO1192 (65.74 38d); pyruvate-flavodoxin oxidoreductase complement(2910494..2914072) Clostridium botulinum A str. ATCC 3502 5187491 YP_001255260.1 CDS murG NC_009495.1 2914702 2915766 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(2914702..2915766) Clostridium botulinum A str. ATCC 3502 5185769 YP_001255261.1 CDS CBO2761A NC_009495.1 2916105 2916254 D hypothetical protein 2916105..2916254 Clostridium botulinum A str. ATCC 3502 5204347 YP_001255262.1 CDS CBO2762 NC_009495.1 2916368 2918476 R sensory box histidine kinase complement(2916368..2918476) Clostridium botulinum A str. ATCC 3502 5187694 YP_001255263.1 CDS recJ NC_009495.1 2918599 2920380 R single-stranded-DNA-specific exonuclease RecJ complement(2918599..2920380) Clostridium botulinum A str. ATCC 3502 5186270 YP_001255264.1 CDS CBO2764 NC_009495.1 2920571 2921389 D AP endonuclease, family 2 2920571..2921389 Clostridium botulinum A str. ATCC 3502 5185099 YP_001255265.1 CDS CBO2765 NC_009495.1 2921679 2923082 R NHL repeat protein complement(2921679..2923082) Clostridium botulinum A str. ATCC 3502 5186847 YP_001255266.1 CDS CBO2766 NC_009495.1 2924077 2925285 R peptidase, M16 family complement(2924077..2925285) Clostridium botulinum A str. ATCC 3502 5185521 YP_001255267.1 CDS CBO2766A NC_009495.1 2925674 2926084 D hypothetical protein 2925674..2926084 Clostridium botulinum A str. ATCC 3502 5204323 YP_001255268.1 CDS thiJ NC_009495.1 2926152 2926703 D DJ-1 family protein 2926152..2926703 Clostridium botulinum A str. ATCC 3502 5187086 YP_001255269.1 CDS glpP NC_009495.1 2927106 2927669 R glycerol uptake operon antiterminator regulatory protein complement(2927106..2927669) Clostridium botulinum A str. ATCC 3502 5187518 YP_001255270.1 CDS gyrA NC_009495.1 2927718 2930588 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A complement(2927718..2930588) Clostridium botulinum A str. ATCC 3502 5185730 YP_001255271.1 CDS gyrB NC_009495.1 2930662 2932617 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B complement(2930662..2932617) Clostridium botulinum A str. ATCC 3502 5187878 YP_001255272.1 CDS CBO2771 NC_009495.1 2932984 2933370 R hypothetical protein complement(2932984..2933370) Clostridium botulinum A str. ATCC 3502 5187028 YP_001255273.1 CDS CBO2772 NC_009495.1 2933548 2934720 D transporter monovalent cation:proton antiporter-2 (CPA2) family 2933548..2934720 Clostridium botulinum A str. ATCC 3502 5187029 YP_001255274.1 CDS CBO2773 NC_009495.1 2934733 2935083 D hypothetical protein 2934733..2935083 Clostridium botulinum A str. ATCC 3502 5185198 YP_001255275.1 CDS CBO2774 NC_009495.1 2935544 2935780 D hypothetical protein 2935544..2935780 Clostridium botulinum A str. ATCC 3502 5187706 YP_001255276.1 CDS CBO2775 NC_009495.1 2935800 2936693 D polysaccharide deacetylase 2935800..2936693 Clostridium botulinum A str. ATCC 3502 5184306 YP_001255277.1 CDS CBO2776 NC_009495.1 2936772 2938061 R hypothetical protein complement(2936772..2938061) Clostridium botulinum A str. ATCC 3502 5185474 YP_001255278.1 CDS galE NC_009495.1 2938099 2939079 R UDP-glucose 4-epimerase complement(2938099..2939079) Clostridium botulinum A str. ATCC 3502 5186296 YP_001255279.1 CDS CBO2778 NC_009495.1 2939426 2939842 R flavodoxin complement(2939426..2939842) Clostridium botulinum A str. ATCC 3502 5187033 YP_001255280.1 CDS CBO2779 NC_009495.1 2940230 2940937 R hypothetical protein complement(2940230..2940937) Clostridium botulinum A str. ATCC 3502 5187032 YP_001255281.1 CDS CBO2780 NC_009495.1 2941209 2942630 R MATE efflux family protein complement(2941209..2942630) Clostridium botulinum A str. ATCC 3502 5187039 YP_001255282.1 CDS CBO2781 NC_009495.1 2943254 2945320 R AraC family transcriptional regulator complement(2943254..2945320) Clostridium botulinum A str. ATCC 3502 5187038 YP_001255283.1 CDS CBO2782 NC_009495.1 2945719 2946756 D LD-carboxypeptidase 2945719..2946756 Clostridium botulinum A str. ATCC 3502 5186345 YP_001255284.1 CDS CBO2783 NC_009495.1 2946941 2947108 D hypothetical protein 2946941..2947108 Clostridium botulinum A str. ATCC 3502 5187363 YP_001255285.1 CDS glpK NC_009495.1 2947271 2948767 R glycerol kinase complement(2947271..2948767) Clostridium botulinum A str. ATCC 3502 5185396 YP_001255286.1 CDS glpF NC_009495.1 2949031 2949735 R glycerol uptake facilitator protein complement(2949031..2949735) Clostridium botulinum A str. ATCC 3502 5187210 YP_001255287.1 CDS CBO2786 NC_009495.1 2950269 2950589 D hypothetical protein 2950269..2950589 Clostridium botulinum A str. ATCC 3502 5185899 YP_001255288.1 CDS CBO2787 NC_009495.1 2950700 2951398 R membrane protein, VanZ family complement(2950700..2951398) Clostridium botulinum A str. ATCC 3502 5187141 YP_001255289.1 CDS CBO2788 NC_009495.1 2951530 2952606 R ABC transporter permease complement(2951530..2952606) Clostridium botulinum A str. ATCC 3502 5187045 YP_001255290.1 CDS CBO2789 NC_009495.1 2952590 2953486 R ABC transporter ATP-binding protein complement(2952590..2953486) Clostridium botulinum A str. ATCC 3502 5187229 YP_001255291.1 CDS CBO2790 NC_009495.1 2953492 2953872 R GntR family transcriptional regulator complement(2953492..2953872) Clostridium botulinum A str. ATCC 3502 5187049 YP_001255292.1 CDS CBO2791 NC_009495.1 2954046 2954597 R membrane protein, VanZ family complement(2954046..2954597) Clostridium botulinum A str. ATCC 3502 5187046 YP_001255293.1 CDS hcp NC_009495.1 2954994 2956706 D catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 2954994..2956706 Clostridium botulinum A str. ATCC 3502 5184840 YP_001255294.1 CDS CBO2793 NC_009495.1 2957454 2958044 D membrane-spanning protein 2957454..2958044 Clostridium botulinum A str. ATCC 3502 5187050 YP_001255295.1 CDS CBO2794 NC_009495.1 2958348 2959580 D aminopeptidase 2958348..2959580 Clostridium botulinum A str. ATCC 3502 5184841 YP_001255296.1 CDS gerAC NC_009495.1 2959768 2960889 R spore germination protein complement(2959768..2960889) Clostridium botulinum A str. ATCC 3502 5187078 YP_001255297.1 CDS gerAB NC_009495.1 2960867 2962000 R spore germination protein complement(2960867..2962000) Clostridium botulinum A str. ATCC 3502 5187588 YP_001255298.1 CDS gerAA NC_009495.1 2961990 2963477 R spore germination protein complement(2961990..2963477) Clostridium botulinum A str. ATCC 3502 5185151 YP_001255299.1 CDS CBO2798 NC_009495.1 2963737 2963955 R hypothetical protein complement(2963737..2963955) Clostridium botulinum A str. ATCC 3502 5185411 YP_001255300.1 CDS CBO2799 NC_009495.1 2964171 2964290 R hypothetical protein complement(2964171..2964290) Clostridium botulinum A str. ATCC 3502 5184714 YP_001255301.1 CDS pyroA NC_009495.1 2964292 2965146 R with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS complement(2964292..2965146) Clostridium botulinum A str. ATCC 3502 5187686 YP_001255302.1 CDS CBO2801 NC_009495.1 2965505 2966236 R polysaccharide deacetylase complement(2965505..2966236) Clostridium botulinum A str. ATCC 3502 5185653 YP_001255303.1 CDS csdA NC_009495.1 2966456 2968030 R ATP-dependent RNA helicase, DEAD/DEAH box family complement(2966456..2968030) Clostridium botulinum A str. ATCC 3502 5187665 YP_001255304.1 CDS CBO2803 NC_009495.1 2968107 2968274 R Highly similar to CBO1301 (89.0 38d) and CBO3279 (89.2 38d); hypothetical protein complement(2968107..2968274) Clostridium botulinum A str. ATCC 3502 5185037 YP_001255305.1 CDS CBO2804 NC_009495.1 2968708 2969133 D hypothetical protein 2968708..2969133 Clostridium botulinum A str. ATCC 3502 5186623 YP_001255306.1 CDS CBO2805 NC_009495.1 2969222 2970916 R methyl-accepting chemotaxis protein complement(2969222..2970916) Clostridium botulinum A str. ATCC 3502 5187568 YP_001255307.1 CDS CBO2806 NC_009495.1 2971113 2971523 R universal stress protein family protein complement(2971113..2971523) Clostridium botulinum A str. ATCC 3502 5187061 YP_001255308.1 CDS CBO2807 NC_009495.1 2972156 2972797 D iron-sulfur cluster-binding protein 2972156..2972797 Clostridium botulinum A str. ATCC 3502 5187062 YP_001255309.1 CDS glsA NC_009495.1 2973057 2973974 R catalyzes the formation of glutamate from glutamine; glutaminase complement(2973057..2973974) Clostridium botulinum A str. ATCC 3502 5185637 YP_001255310.1 CDS CBO2809 NC_009495.1 2974365 2975390 R hypothetical protein complement(2974365..2975390) Clostridium botulinum A str. ATCC 3502 5185163 YP_001255311.1 CDS CBO2810 NC_009495.1 2975657 2975941 R lipoprotein complement(2975657..2975941) Clostridium botulinum A str. ATCC 3502 5186522 YP_001255312.1 CDS CBO2811 NC_009495.1 2976074 2978134 R methyl-accepting chemotaxis protein complement(2976074..2978134) Clostridium botulinum A str. ATCC 3502 5187074 YP_001255313.1 CDS CBO2812 NC_009495.1 2978651 2979451 R hypothetical protein complement(2978651..2979451) Clostridium botulinum A str. ATCC 3502 5184369 YP_001255314.1 CDS nrdF NC_009495.1 2979795 2980823 R ribonucleoside-diphosphate reductase subunit beta complement(2979795..2980823) Clostridium botulinum A str. ATCC 3502 5187071 YP_001255315.1 CDS nrdE NC_009495.1 2981019 2983310 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(2981019..2983310) Clostridium botulinum A str. ATCC 3502 5187072 YP_001255316.1 CDS CBO2816 NC_009495.1 2984669 2985790 D exported protein 2984669..2985790 Clostridium botulinum A str. ATCC 3502 5187073 YP_001255317.1 CDS CBO2817 NC_009495.1 2986087 2986878 D hypothetical protein 2986087..2986878 Clostridium botulinum A str. ATCC 3502 5187067 YP_001255318.1 CDS dinB NC_009495.1 2987038 2988087 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(2987038..2988087) Clostridium botulinum A str. ATCC 3502 5187069 YP_001255319.1 CDS CBO2819 NC_009495.1 2988552 2989787 R catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines; dihydropyrimidine dehydrogenase complement(2988552..2989787) Clostridium botulinum A str. ATCC 3502 5187023 YP_001255320.1 CDS CBO2820 NC_009495.1 2989787 2991103 R pyridine nucleotide-disulfide oxidoreductase complement(2989787..2991103) Clostridium botulinum A str. ATCC 3502 5186717 YP_001255321.1 CDS pyrR NC_009495.1 2991550 2992098 R pyrimidine operon regulatory protein/uracil phosphoribosyltransferase complement(2991550..2992098) Clostridium botulinum A str. ATCC 3502 5185349 YP_001255322.1 CDS CBO2822 NC_009495.1 2992427 2993482 R hypothetical protein complement(2992427..2993482) Clostridium botulinum A str. ATCC 3502 5187474 YP_001255323.1 CDS CBO2823 NC_009495.1 2993912 2994331 R MarR family transcriptional regulator complement(2993912..2994331) Clostridium botulinum A str. ATCC 3502 5186927 YP_001255324.1 CDS CBO2824 NC_009495.1 2994349 2996607 R excinuclease ABC subunit A complement(2994349..2996607) Clostridium botulinum A str. ATCC 3502 5186266 YP_001255325.1 CDS CBO2825 NC_009495.1 2997151 2997459 D hypothetical protein 2997151..2997459 Clostridium botulinum A str. ATCC 3502 5187488 YP_001255326.1 CDS ligT NC_009495.1 2997570 2998097 R 2'-5' RNA ligase complement(2997570..2998097) Clostridium botulinum A str. ATCC 3502 5187517 YP_001255327.1 CDS CBO2827 NC_009495.1 2998282 2998680 R hypothetical protein complement(2998282..2998680) Clostridium botulinum A str. ATCC 3502 5187524 YP_001255328.1 CDS CBO2828 NC_009495.1 2998920 3000632 R methyl-accepting chemotaxis protein complement(2998920..3000632) Clostridium botulinum A str. ATCC 3502 5184278 YP_001255329.1 CDS CBO2829 NC_009495.1 3001344 3001781 R MutT/nudix family protein complement(3001344..3001781) Clostridium botulinum A str. ATCC 3502 5186573 YP_001255330.1 CDS CBO2830 NC_009495.1 3002321 3002788 D FUR family transcriptional regulator 3002321..3002788 Clostridium botulinum A str. ATCC 3502 5187402 YP_001255331.1 CDS CBO2831 NC_009495.1 3002921 3004918 D Weakly similar to the N-terminal region of Thermoanaerobacter thermosulfurogenes amylopullulanase precursor amyB SWALL:APU_THETU (SWALL:P38536) (1861 aa) fasta scores: E(): 6.8, 21.5 38d in 586 aa; hypothetical protein 3002921..3004918 Clostridium botulinum A str. ATCC 3502 5187611 YP_001255332.1 CDS CBO2832 NC_009495.1 3005005 3007224 R glycosyl hydrolase, family 18 complement(3005005..3007224) Clostridium botulinum A str. ATCC 3502 5186865 YP_001255333.1 CDS nagB NC_009495.1 3007452 3008186 R catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase complement(3007452..3008186) Clostridium botulinum A str. ATCC 3502 5187663 YP_001255334.1 CDS nagA NC_009495.1 3008254 3009390 R N-acetylglucosamine-6-phosphate deacetylase complement(3008254..3009390) Clostridium botulinum A str. ATCC 3502 5187595 YP_001255335.1 CDS CBO2835 NC_009495.1 3009551 3010285 R GntR family transcriptional regulator complement(3009551..3010285) Clostridium botulinum A str. ATCC 3502 5187749 YP_001255336.1 CDS CBO2836 NC_009495.1 3010580 3011437 D BglG family transcriptional antiterminator 3010580..3011437 Clostridium botulinum A str. ATCC 3502 5184735 YP_001255337.1 CDS CBO2837 NC_009495.1 3011655 3012134 R PTS system glucose subfamily transporter subunit IIA complement(3011655..3012134) Clostridium botulinum A str. ATCC 3502 5185794 YP_001255338.1 CDS nagE NC_009495.1 3012881 3014323 D PTS system, N-acetylglucosamine-specific, IIBC component 3012881..3014323 Clostridium botulinum A str. ATCC 3502 5187107 YP_001255339.1 CDS CBO2840 NC_009495.1 3014803 3016173 D MATE efflux family protein 3014803..3016173 Clostridium botulinum A str. ATCC 3502 5187094 YP_001255340.1 CDS CBO2841 NC_009495.1 3016338 3017732 R MATE efflux family protein complement(3016338..3017732) Clostridium botulinum A str. ATCC 3502 5184982 YP_001255341.1 CDS CBO2842 NC_009495.1 3017966 3019165 R metallo-beta-lactamase/flavodoxin complement(3017966..3019165) Clostridium botulinum A str. ATCC 3502 5187097 YP_001255342.1 CDS CBO2843 NC_009495.1 3019224 3021131 R acyl-CoA dehydrogenase complement(3019224..3021131) Clostridium botulinum A str. ATCC 3502 5187104 YP_001255343.1 CDS gptB NC_009495.1 3022098 3023009 D PTS system mannose-specific transporter subunit IID 3022098..3023009 Clostridium botulinum A str. ATCC 3502 5187100 YP_001255344.1 CDS CBO2846 NC_009495.1 3023180 3023590 D hypothetical protein 3023180..3023590 Clostridium botulinum A str. ATCC 3502 5187101 YP_001255345.1 CDS ctfA NC_009495.1 3024128 3024844 D CoA-transferase subunit A 3024128..3024844 Clostridium botulinum A str. ATCC 3502 5184991 YP_001255346.1 CDS ctfB NC_009495.1 3024856 3025509 D CoA-transferase subunit B 3024856..3025509 Clostridium botulinum A str. ATCC 3502 5184990 YP_001255347.1 CDS CBO2848A NC_009495.1 3025805 3026104 D hypothetical protein 3025805..3026104 Clostridium botulinum A str. ATCC 3502 5204340 YP_001255348.1 CDS CBO2849 NC_009495.1 3026091 3026660 R hypothetical protein complement(3026091..3026660) Clostridium botulinum A str. ATCC 3502 5187145 YP_001255349.1 CDS CBO2850 NC_009495.1 3026879 3027367 R dehydrogenase, [2Fe-2S] binding subunit complement(3026879..3027367) Clostridium botulinum A str. ATCC 3502 5204325 YP_001255350.1 CDS CBO2851 NC_009495.1 3027372 3028202 R dehydrogenase, FAD binding subunit complement(3027372..3028202) Clostridium botulinum A str. ATCC 3502 5184970 YP_001255351.1 CDS CBO2852 NC_009495.1 3028199 3030529 R dehydrogenase, molybdenum binding subunit complement(3028199..3030529) Clostridium botulinum A str. ATCC 3502 5187106 YP_001255352.1 CDS CBO2853 NC_009495.1 3031592 3032809 R transporter monovalent cation:proton antiporter-2 (CPA2) family complement(3031592..3032809) Clostridium botulinum A str. ATCC 3502 5184983 YP_001255353.1 CDS CBO2854 NC_009495.1 3033927 3034598 R HAD-superfamily hydrolase, subfamily IA complement(3033927..3034598) Clostridium botulinum A str. ATCC 3502 5184441 YP_001255354.1 CDS CBO2855 NC_009495.1 3034702 3034953 D hypothetical protein 3034702..3034953 Clostridium botulinum A str. ATCC 3502 5185662 YP_001255355.1 CDS CBO2856 NC_009495.1 3035018 3035164 R hypothetical protein complement(3035018..3035164) Clostridium botulinum A str. ATCC 3502 5185869 YP_001255356.1 CDS cfr NC_009495.1 3035493 3036527 R chloramphenicol/florfenicol resistance protein complement(3035493..3036527) Clostridium botulinum A str. ATCC 3502 5184333 YP_001255357.1 CDS CBO2858 NC_009495.1 3036690 3038168 R drug resistance ABC transporter RA2 family, ATP-binding protein complement(3036690..3038168) Clostridium botulinum A str. ATCC 3502 5187233 YP_001255358.1 CDS CBO2859 NC_009495.1 3038632 3040002 R 23S rRNA (uracil-5-)-methyltransferase RumA complement(3038632..3040002) Clostridium botulinum A str. ATCC 3502 5187117 YP_001255359.1 CDS CBO2860 NC_009495.1 3040274 3040720 R hypothetical protein complement(3040274..3040720) Clostridium botulinum A str. ATCC 3502 5186823 YP_001255360.1 CDS CBO2861 NC_009495.1 3041051 3042910 D sulfatase 3041051..3042910 Clostridium botulinum A str. ATCC 3502 5186822 YP_001255361.1 CDS CBO2862 NC_009495.1 3042936 3043688 D hypothetical protein 3042936..3043688 Clostridium botulinum A str. ATCC 3502 5187116 YP_001255362.1 CDS ribH NC_009495.1 3044098 3044562 R RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase complement(3044098..3044562) Clostridium botulinum A str. ATCC 3502 5184641 YP_001255363.1 CDS ribA NC_009495.1 3044594 3045799 R bifunctional riboflavin biosynthesis protein RibAB complement(3044594..3045799) Clostridium botulinum A str. ATCC 3502 5186493 YP_001255364.1 CDS ribB NC_009495.1 3046107 3046757 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(3046107..3046757) Clostridium botulinum A str. ATCC 3502 5187428 YP_001255365.1 CDS ribD NC_009495.1 3046774 3047871 R riboflavin biosynthesis protein RibD complement(3046774..3047871) Clostridium botulinum A str. ATCC 3502 5187125 YP_001255366.1 CDS pepD NC_009495.1 3048275 3049711 R aminoacyl-histidine dipeptidase complement(3048275..3049711) Clostridium botulinum A str. ATCC 3502 5187128 YP_001255367.1 CDS CBO2868 NC_009495.1 3050092 3050985 D metallo-beta-lactamase 3050092..3050985 Clostridium botulinum A str. ATCC 3502 5186412 YP_001255368.1 CDS mgtA NC_009495.1 3051223 3053868 R magnesium-translocating P-type ATPase complement(3051223..3053868) Clostridium botulinum A str. ATCC 3502 5187124 YP_001255369.1 CDS CBO2870 NC_009495.1 3054048 3054167 R hypothetical protein complement(3054048..3054167) Clostridium botulinum A str. ATCC 3502 5187123 YP_001255370.1 CDS CBO2871 NC_009495.1 3054611 3055015 R hypothetical protein complement(3054611..3055015) Clostridium botulinum A str. ATCC 3502 5187289 YP_001255371.1 CDS purD NC_009495.1 3055343 3056584 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(3055343..3056584) Clostridium botulinum A str. ATCC 3502 5187122 YP_001255372.1 CDS purH NC_009495.1 3056733 3058232 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(3056733..3058232) Clostridium botulinum A str. ATCC 3502 5187064 YP_001255373.1 CDS purN NC_009495.1 3058446 3059063 R glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase complement(3058446..3059063) Clostridium botulinum A str. ATCC 3502 5187126 YP_001255374.1 CDS purG NC_009495.1 3059191 3060195 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(3059191..3060195) Clostridium botulinum A str. ATCC 3502 5185643 YP_001255375.1 CDS purF NC_009495.1 3060247 3061695 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(3060247..3061695) Clostridium botulinum A str. ATCC 3502 5184818 YP_001255376.1 CDS purC NC_009495.1 3061787 3062491 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(3061787..3062491) Clostridium botulinum A str. ATCC 3502 5185071 YP_001255377.1 CDS purE NC_009495.1 3062491 3062970 R phosphoribosylaminoimidazole carboxylase catalytic subunit complement(3062491..3062970) Clostridium botulinum A str. ATCC 3502 5187083 YP_001255378.1 CDS xdhAC NC_009495.1 3063646 3066216 R In Escherichia coli the molybdenum binding and iron-sulfur binding domains of xanthine dehydrogenase are carried on two separate genes, wheareas in this case they are present on a single gene.; xanthine dehydrogenase, molybdopterin-binding subunit complement(3063646..3066216) Clostridium botulinum A str. ATCC 3502 5184562 YP_001255379.1 CDS CBO2882 NC_009495.1 3066576 3067793 R Zn-dependent extracellular dipeptidase; similar to succinyl-diaminopimelate desuccinylases; peptidase complement(3066576..3067793) Clostridium botulinum A str. ATCC 3502 5187693 YP_001255380.1 CDS CBO2883 NC_009495.1 3067819 3069147 R in Escherichia coli expression is induced in response to phase-specific signals and controlled by RpoS; chlorohydrolase/aminohydrolase complement(3067819..3069147) Clostridium botulinum A str. ATCC 3502 5187140 YP_001255381.1 CDS CBO2884 NC_009495.1 3069178 3072195 R with YgfM and YgfN forms a selenate reductase, which seems to catalyze the reduction of selenate to selenite; YgfK mutants are unable to reduce selenate; involved in purine salvage process; seems to act as an oxidoreductase, but sequence similarity suggests it is a dihydrothymine dehydrogenase; selenate reductase subunit YgfK complement(3069178..3072195) Clostridium botulinum A str. ATCC 3502 5187480 YP_001255382.1 CDS CBO2885 NC_009495.1 3072231 3073427 R aspartate/ornithine carbamoyltransferase complement(3072231..3073427) Clostridium botulinum A str. ATCC 3502 5185655 YP_001255383.1 CDS CBO2886 NC_009495.1 3073769 3075163 R catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; phenylhydantoinase complement(3073769..3075163) Clostridium botulinum A str. ATCC 3502 5186226 YP_001255384.1 CDS pbuX NC_009495.1 3075213 3076619 R xanthine/uracil permease complement(3075213..3076619) Clostridium botulinum A str. ATCC 3502 5186582 YP_001255385.1 CDS dpaL NC_009495.1 3076641 3077852 R catalyzes the formation of pyruvate from 2,3-diaminopropionate; diaminopropionate ammonia-lyase complement(3076641..3077852) Clostridium botulinum A str. ATCC 3502 5187264 YP_001255386.1 CDS CBO2889 NC_009495.1 3078137 3079900 R sigma-54 dependent transcriptional regulator complement(3078137..3079900) Clostridium botulinum A str. ATCC 3502 5187095 YP_001255387.1 CDS CBO2890 NC_009495.1 3080263 3081000 D hypothetical protein 3080263..3081000 Clostridium botulinum A str. ATCC 3502 5184891 YP_001255388.1 CDS CBO2891 NC_009495.1 3081015 3081629 D hypothetical protein 3081015..3081629 Clostridium botulinum A str. ATCC 3502 5184968 YP_001255389.1 CDS CBO2892 NC_009495.1 3081610 3082458 D hypothetical protein 3081610..3082458 Clostridium botulinum A str. ATCC 3502 5185405 YP_001255390.1 CDS CBO2893 NC_009495.1 3082440 3083249 D xanthine dehydrogenase accessory factor 3082440..3083249 Clostridium botulinum A str. ATCC 3502 5185838 YP_001255391.1 CDS CBO2894 NC_009495.1 3083275 3083820 D hypothetical protein 3083275..3083820 Clostridium botulinum A str. ATCC 3502 5187149 YP_001255392.1 CDS CBO2895 NC_009495.1 3083817 3084785 D iron ABC transporter permease 3083817..3084785 Clostridium botulinum A str. ATCC 3502 5187766 YP_001255393.1 CDS CBO2896 NC_009495.1 3084782 3085576 D iron ABC transporter ATP-binding protein 3084782..3085576 Clostridium botulinum A str. ATCC 3502 5185499 YP_001255394.1 CDS CBO2897 NC_009495.1 3085628 3086686 D iron chelate uptake ABC transporter solute-binding protein 3085628..3086686 Clostridium botulinum A str. ATCC 3502 5186153 YP_001255395.1 CDS CBO2898 NC_009495.1 3086824 3087156 D hypothetical protein 3086824..3087156 Clostridium botulinum A str. ATCC 3502 5184948 YP_001255396.1 CDS CBO2899 NC_009495.1 3087284 3087856 D lipase/acylhydrolase, GDSL family 3087284..3087856 Clostridium botulinum A str. ATCC 3502 5185199 YP_001255397.1 CDS CBO2900 NC_009495.1 3087970 3088563 R hypothetical protein complement(3087970..3088563) Clostridium botulinum A str. ATCC 3502 5187155 YP_001255398.1 CDS CBO2901 NC_009495.1 3089002 3090444 R xanthine/uracil permease complement(3089002..3090444) Clostridium botulinum A str. ATCC 3502 5185654 YP_001255399.1 CDS CBO2902 NC_009495.1 3091033 3092385 R sodium/amino acid (alanine) symporter complement(3091033..3092385) Clostridium botulinum A str. ATCC 3502 5186547 YP_001255400.1 CDS CBO2904 NC_009495.1 3093335 3095626 R helicase complement(3093335..3095626) Clostridium botulinum A str. ATCC 3502 5184350 YP_001255401.1 CDS mnmA NC_009495.1 3096133 3097194 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(3096133..3097194) Clostridium botulinum A str. ATCC 3502 5187368 YP_001255402.1 CDS CBO2906 NC_009495.1 3097415 3097549 D hypothetical protein 3097415..3097549 Clostridium botulinum A str. ATCC 3502 5185274 YP_001255403.1 CDS CBO2907 NC_009495.1 3097761 3099392 R peptidase complement(3097761..3099392) Clostridium botulinum A str. ATCC 3502 5187408 YP_001255404.1 CDS CBO2908 NC_009495.1 3099392 3099889 R hypothetical protein complement(3099392..3099889) Clostridium botulinum A str. ATCC 3502 5184737 YP_001255405.1 CDS CBO2909 NC_009495.1 3100207 3101532 D modulator of ions transport 3100207..3101532 Clostridium botulinum A str. ATCC 3502 5185638 YP_001255406.1 CDS CBO2910 NC_009495.1 3101885 3102175 R hypothetical protein complement(3101885..3102175) Clostridium botulinum A str. ATCC 3502 5186448 YP_001255407.1 CDS thiC NC_009495.1 3102194 3103507 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(3102194..3103507) Clostridium botulinum A str. ATCC 3502 5186957 YP_001255408.1 CDS purF NC_009495.1 3103718 3105100 R amidophosphoribosyltransferase complement(3103718..3105100) Clostridium botulinum A str. ATCC 3502 5185329 YP_001255409.1 CDS CBO2914 NC_009495.1 3105357 3105638 R hypothetical protein complement(3105357..3105638) Clostridium botulinum A str. ATCC 3502 5185634 YP_001255410.1 CDS CBO2915 NC_009495.1 3105694 3106383 R hypothetical protein complement(3105694..3106383) Clostridium botulinum A str. ATCC 3502 5186409 YP_001255411.1 CDS CBO2916 NC_009495.1 3106385 3107035 R hypothetical protein complement(3106385..3107035) Clostridium botulinum A str. ATCC 3502 5187014 YP_001255412.1 CDS CBO2917 NC_009495.1 3107042 3107899 R ABC transporter ATP-binding protein complement(3107042..3107899) Clostridium botulinum A str. ATCC 3502 5187172 YP_001255413.1 CDS CBO2918 NC_009495.1 3108106 3108477 R GntR family transcriptional regulator complement(3108106..3108477) Clostridium botulinum A str. ATCC 3502 5184673 YP_001255414.1 CDS trpP NC_009495.1 3109115 3109627 D hypothetical protein 3109115..3109627 Clostridium botulinum A str. ATCC 3502 5187620 YP_001255415.1 CDS htrP NC_009495.1 3110217 3110858 D 3,4-dihydroxy-2-butanone 4-phosphate synthase 3110217..3110858 Clostridium botulinum A str. ATCC 3502 5187176 YP_001255416.1 CDS CBO2922 NC_009495.1 3111145 3111888 R (Fe-S)-binding protein complement(3111145..3111888) Clostridium botulinum A str. ATCC 3502 5186886 YP_001255417.1 CDS CBO2923 NC_009495.1 3111993 3112670 D cyclic nucleotide-binding protein 3111993..3112670 Clostridium botulinum A str. ATCC 3502 5187319 YP_001255418.1 CDS cwlJ NC_009495.1 3112759 3113202 D cell wall hydrolase 3112759..3113202 Clostridium botulinum A str. ATCC 3502 5186534 YP_001255419.1 CDS CBO2925 NC_009495.1 3113225 3113782 D hypothetical protein 3113225..3113782 Clostridium botulinum A str. ATCC 3502 5185052 YP_001255420.1 CDS CBO2926 NC_009495.1 3114045 3114389 R hypothetical protein complement(3114045..3114389) Clostridium botulinum A str. ATCC 3502 5187185 YP_001255421.1 CDS CBO2927 NC_009495.1 3114506 3116668 R This CDS is also similar to CBO0992 (34.488 identity in 722 aa overlap) and to CBO0993 (34.669 identity in 724 aa overlap).; phage infection protein complement(3114506..3116668) Clostridium botulinum A str. ATCC 3502 5187430 YP_001255422.1 CDS glpQ NC_009495.1 3116976 3117728 R glycerophosphoryl diester phosphodiesterase complement(3116976..3117728) Clostridium botulinum A str. ATCC 3502 5184817 YP_001255423.1 CDS CBO2929 NC_009495.1 3118107 3119069 R TPR domain protein complement(3118107..3119069) Clostridium botulinum A str. ATCC 3502 5187821 YP_001255424.1 CDS CBO2930 NC_009495.1 3119530 3120783 D decarboxylase 3119530..3120783 Clostridium botulinum A str. ATCC 3502 5185160 YP_001255425.1 CDS CBO2932 NC_009495.1 3121472 3122032 R exported protein complement(3121472..3122032) Clostridium botulinum A str. ATCC 3502 5185685 YP_001255426.1 CDS CBO2934 NC_009495.1 3122852 3123586 R hypothetical protein complement(3122852..3123586) Clostridium botulinum A str. ATCC 3502 5187052 YP_001255427.1 CDS CBO2935 NC_009495.1 3123725 3124528 R hypothetical protein complement(3123725..3124528) Clostridium botulinum A str. ATCC 3502 5184874 YP_001255428.1 CDS CBO2936 NC_009495.1 3124519 3125208 R hypothetical protein complement(3124519..3125208) Clostridium botulinum A str. ATCC 3502 5187190 YP_001255429.1 CDS CBO2937 NC_009495.1 3125284 3126171 R hypothetical protein complement(3125284..3126171) Clostridium botulinum A str. ATCC 3502 5185713 YP_001255430.1 CDS rpoD NC_009495.1 3126246 3127331 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium; RNA polymerase sigma factor RpoD complement(3126246..3127331) Clostridium botulinum A str. ATCC 3502 5187872 YP_001255431.1 CDS dnaG NC_009495.1 3127356 3129128 R synthesizes RNA primers at the replication forks; DNA primase complement(3127356..3129128) Clostridium botulinum A str. ATCC 3502 5184940 YP_001255432.1 CDS CBO2940 NC_009495.1 3129411 3130439 R dGTPase type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein complement(3129411..3130439) Clostridium botulinum A str. ATCC 3502 5186323 YP_001255433.1 CDS cotS NC_009495.1 3130581 3131651 D spore coat protein-like protein 3130581..3131651 Clostridium botulinum A str. ATCC 3502 5184901 YP_001255434.1 CDS ppdK NC_009495.1 3131704 3134337 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase complement(3131704..3134337) Clostridium botulinum A str. ATCC 3502 5187200 YP_001255435.1 CDS CBO2943 NC_009495.1 3134417 3135058 R hypothetical protein complement(3134417..3135058) Clostridium botulinum A str. ATCC 3502 5187608 YP_001255436.1 CDS CBO2944 NC_009495.1 3135568 3136188 R UBA/TS-N domain-containing protein complement(3135568..3136188) Clostridium botulinum A str. ATCC 3502 5185462 YP_001255437.1 CDS recO NC_009495.1 3136191 3136934 R involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO complement(3136191..3136934) Clostridium botulinum A str. ATCC 3502 5187635 YP_001255438.1 CDS era NC_009495.1 3136967 3137857 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(3136967..3137857) Clostridium botulinum A str. ATCC 3502 5185003 YP_001255439.1 CDS cdd NC_009495.1 3137873 3138271 R Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase complement(3137873..3138271) Clostridium botulinum A str. ATCC 3502 5184897 YP_001255440.1 CDS CBO2948 NC_009495.1 3138355 3139053 R N-terminal region similar to diacylglycerol kinase,and C-terminal region to phosphatases.; diacylglycerol kinase/PAP2 family protein complement(3138355..3139053) Clostridium botulinum A str. ATCC 3502 5186460 YP_001255441.1 CDS CBO2949 NC_009495.1 3139092 3139592 R metalloprotease complement(3139092..3139592) Clostridium botulinum A str. ATCC 3502 5185649 YP_001255442.1 CDS CBO2950 NC_009495.1 3139589 3141676 R hydrolase complement(3139589..3141676) Clostridium botulinum A str. ATCC 3502 5184377 YP_001255443.1 CDS spoIV NC_009495.1 3141699 3142859 R stage IV sporulation protein complement(3141699..3142859) Clostridium botulinum A str. ATCC 3502 5186893 YP_001255444.1 CDS CBO2951A NC_009495.1 3142849 3143145 R sporulation protein YqfC complement(3142849..3143145) Clostridium botulinum A str. ATCC 3502 5204357 YP_001255445.1 CDS CBO2952 NC_009495.1 3143259 3143705 R GatB/Yqey domain protein complement(3143259..3143705) Clostridium botulinum A str. ATCC 3502 5187318 YP_001255446.1 CDS rpsU NC_009495.1 3143748 3143924 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(3143748..3143924) Clostridium botulinum A str. ATCC 3502 5187317 YP_001255447.1 CDS CBO2954 NC_009495.1 3144061 3144405 R HIT family protein complement(3144061..3144405) Clostridium botulinum A str. ATCC 3502 5185395 YP_001255448.1 CDS CBO2955 NC_009495.1 3144462 3145760 R MiaB family RNA modification protein complement(3144462..3145760) Clostridium botulinum A str. ATCC 3502 5187514 YP_001255449.1 CDS CBO2956 NC_009495.1 3145760 3146518 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(3145760..3146518) Clostridium botulinum A str. ATCC 3502 5185009 YP_001255450.1 CDS prmA NC_009495.1 3146616 3147554 R methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase complement(3146616..3147554) Clostridium botulinum A str. ATCC 3502 5187946 YP_001255451.1 CDS dnaJ NC_009495.1 3147732 3148877 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ complement(3147732..3148877) Clostridium botulinum A str. ATCC 3502 5184288 YP_001255452.1 CDS dnaK NC_009495.1 3149020 3150891 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(3149020..3150891) Clostridium botulinum A str. ATCC 3502 5184256 YP_001255453.1 CDS grpE NC_009495.1 3150946 3151590 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(3150946..3151590) Clostridium botulinum A str. ATCC 3502 5186950 YP_001255454.1 CDS hrcA NC_009495.1 3151617 3152648 R Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor complement(3151617..3152648) Clostridium botulinum A str. ATCC 3502 5186942 YP_001255455.1 CDS hemN NC_009495.1 3152849 3154000 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(3152849..3154000) Clostridium botulinum A str. ATCC 3502 5187618 YP_001255456.1 CDS lepA NC_009495.1 3154018 3155826 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(3154018..3155826) Clostridium botulinum A str. ATCC 3502 5186162 YP_001255457.1 CDS CBO2964 NC_009495.1 3155967 3156362 R hypothetical protein complement(3155967..3156362) Clostridium botulinum A str. ATCC 3502 5187215 YP_001255458.1 CDS spoIIP NC_009495.1 3156433 3157524 R stage II sporulation protein complement(3156433..3157524) Clostridium botulinum A str. ATCC 3502 5187764 YP_001255459.1 CDS gpr NC_009495.1 3157709 3158683 R Initiates the rapid degradation of small, acid-soluble proteins during spore germination; germination protease complement(3157709..3158683) Clostridium botulinum A str. ATCC 3502 5188015 YP_001255460.1 CDS rpsT NC_009495.1 3158893 3159159 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 3158893..3159159 Clostridium botulinum A str. ATCC 3502 5187653 YP_001255461.1 CDS holA NC_009495.1 3159194 3160225 R required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta complement(3159194..3160225) Clostridium botulinum A str. ATCC 3502 5187223 YP_001255462.1 CDS CBO2969 NC_009495.1 3160254 3162041 R ComEC/Rec2 family protein complement(3160254..3162041) Clostridium botulinum A str. ATCC 3502 5187603 YP_001255463.1 CDS CBO2970 NC_009495.1 3162053 3162283 R hypothetical protein complement(3162053..3162283) Clostridium botulinum A str. ATCC 3502 5186625 YP_001255464.1 CDS CBO2971 NC_009495.1 3162388 3164982 R cation transporting ATPase complement(3162388..3164982) Clostridium botulinum A str. ATCC 3502 5185697 YP_001255465.1 CDS CBO2972 NC_009495.1 3165491 3167005 R hypothetical protein complement(3165491..3167005) Clostridium botulinum A str. ATCC 3502 5187189 YP_001255466.1 CDS CBO2973 NC_009495.1 3167653 3167769 R hypothetical protein complement(3167653..3167769) Clostridium botulinum A str. ATCC 3502 5185701 YP_001255467.1 CDS selB NC_009495.1 3168726 3170633 R selenocysteine-specific translation elongation factor complement(3168726..3170633) Clostridium botulinum A str. ATCC 3502 5186738 YP_001255468.1 CDS fdhA NC_009495.1 3170652 3172040 R catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase complement(3170652..3172040) Clostridium botulinum A str. ATCC 3502 5187374 YP_001255469.1 CDS selD NC_009495.1 3172107 3173186 R This CDS contains an in-frame UGA codon encoding selenocysteine; selenide, water dikinase complement(join(3172107..3173093,3173097..3173186)) Clostridium botulinum A str. ATCC 3502 5187704 YP_001255470.1 CDS CBO2978 NC_009495.1 3173292 3173900 R comE operon protein 1 complement(3173292..3173900) Clostridium botulinum A str. ATCC 3502 5185552 YP_001255471.1 CDS CBO2979 NC_009495.1 3174089 3175336 D D-alanyl-D-alanine carboxypeptidase 3174089..3175336 Clostridium botulinum A str. ATCC 3502 5185944 YP_001255472.1 CDS rluD2 NC_009495.1 3175444 3176346 R pseudouridine synthase complement(3175444..3176346) Clostridium botulinum A str. ATCC 3502 5186771 YP_001255473.1 CDS CBO2981 NC_009495.1 3176672 3177052 R endoribonuclease L-PSP complement(3176672..3177052) Clostridium botulinum A str. ATCC 3502 5185028 YP_001255474.1 CDS CBO2982 NC_009495.1 3177068 3178342 R cell envelope-related function transcriptional attenuator complement(3177068..3178342) Clostridium botulinum A str. ATCC 3502 5187237 YP_001255475.1 CDS CBO2983 NC_009495.1 3178353 3178922 R HDIG domain protein complement(3178353..3178922) Clostridium botulinum A str. ATCC 3502 5187235 YP_001255476.1 CDS nadD NC_009495.1 3179005 3179610 R transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase complement(3179005..3179610) Clostridium botulinum A str. ATCC 3502 5187236 YP_001255477.1 CDS CBO2985 NC_009495.1 3179853 3180146 R RNA-binding protein complement(3179853..3180146) Clostridium botulinum A str. ATCC 3502 5185870 YP_001255478.1 CDS obgE NC_009495.1 3180173 3181447 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(3180173..3181447) Clostridium botulinum A str. ATCC 3502 5185872 YP_001255479.1 CDS rpmA NC_009495.1 3181826 3182128 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(3181826..3182128) Clostridium botulinum A str. ATCC 3502 5187245 YP_001255480.1 CDS CBO2988 NC_009495.1 3182131 3182457 R hypothetical protein complement(3182131..3182457) Clostridium botulinum A str. ATCC 3502 5187247 YP_001255481.1 CDS rplU NC_009495.1 3182460 3182774 R 50S ribosomal protein L21 complement(3182460..3182774) Clostridium botulinum A str. ATCC 3502 5185871 YP_001255482.1 CDS cafA NC_009495.1 3182898 3184337 R ribonuclease, Rne/Rng family complement(3182898..3184337) Clostridium botulinum A str. ATCC 3502 5187244 YP_001255483.1 CDS CBO2991 NC_009495.1 3184495 3185208 R hypothetical protein complement(3184495..3185208) Clostridium botulinum A str. ATCC 3502 5187242 YP_001255484.1 CDS CBO2992 NC_009495.1 3185186 3187039 R radical SAM domain protein complement(3185186..3187039) Clostridium botulinum A str. ATCC 3502 5187689 YP_001255485.1 CDS bofB NC_009495.1 3187149 3188000 R metalloprotease complement(3187149..3188000) Clostridium botulinum A str. ATCC 3502 5187251 YP_001255486.1 CDS CBO2994 NC_009495.1 3188055 3188840 R peptidase, family M23/M37 complement(3188055..3188840) Clostridium botulinum A str. ATCC 3502 5186995 YP_001255487.1 CDS mrdB NC_009495.1 3189160 3190278 R rod shape-determining protein RodA complement(3189160..3190278) Clostridium botulinum A str. ATCC 3502 5187250 YP_001255488.1 CDS minE NC_009495.1 3190377 3190640 R works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE complement(3190377..3190640) Clostridium botulinum A str. ATCC 3502 5187008 YP_001255489.1 CDS divIVB NC_009495.1 3190654 3191451 R septum site-determining protein MinD complement(3190654..3191451) Clostridium botulinum A str. ATCC 3502 5186996 YP_001255490.1 CDS minC NC_009495.1 3191469 3192131 R blocks the formation of polar Z-ring septums; septum formation inhibitor complement(3191469..3192131) Clostridium botulinum A str. ATCC 3502 5187119 YP_001255491.1 CDS CBO2999 NC_009495.1 3192273 3195047 R penicillin-binding protein complement(3192273..3195047) Clostridium botulinum A str. ATCC 3502 5187601 YP_001255492.1 CDS mreD NC_009495.1 3195067 3195567 R rod shape-determining protein MreD complement(3195067..3195567) Clostridium botulinum A str. ATCC 3502 5187809 YP_001255493.1 CDS mreC NC_009495.1 3195569 3196414 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(3195569..3196414) Clostridium botulinum A str. ATCC 3502 5185001 YP_001255494.1 CDS mreB NC_009495.1 3196421 3197431 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(3196421..3197431) Clostridium botulinum A str. ATCC 3502 5184890 YP_001255495.1 CDS radC NC_009495.1 3197460 3198146 R Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC complement(3197460..3198146) Clostridium botulinum A str. ATCC 3502 5185046 YP_001255496.1 CDS maf NC_009495.1 3198161 3198745 R Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein complement(3198161..3198745) Clostridium botulinum A str. ATCC 3502 5187263 YP_001255497.1 CDS CBO3005 NC_009495.1 3198761 3199018 R hypothetical protein complement(3198761..3199018) Clostridium botulinum A str. ATCC 3502 5187258 YP_001255498.1 CDS CBO3006 NC_009495.1 3199128 3199829 R hypothetical protein complement(3199128..3199829) Clostridium botulinum A str. ATCC 3502 5187259 YP_001255499.1 CDS CBO3007 NC_009495.1 3200055 3200594 R hypothetical protein complement(3200055..3200594) Clostridium botulinum A str. ATCC 3502 5185085 YP_001255500.1 CDS CBO3009 NC_009495.1 3201020 3201574 D Similar to the N-terminal region of several including Methanosarcina acetivorans phenazine biosynthesis protein phzf or ma3532 SWALL:Q8TK84 (EMBL:AE011062) (283 aa) fasta scores: E(): 9.8e-17, 37.5 id in 168 aa; hypothetical protein 3201020..3201574 Clostridium botulinum A str. ATCC 3502 5187404 YP_001255501.1 CDS CBO3010 NC_009495.1 3201633 3202070 R hypothetical protein complement(3201633..3202070) Clostridium botulinum A str. ATCC 3502 5187779 YP_001255502.1 CDS CBO3012 NC_009495.1 3202805 3203350 R Similar to C-terminal region of Escherichia coli soluble lytic murein transglycosylase precursor Slt or SltY SWALL:SLT_ECOLI (SWALL:P03810) (645 aa) fasta scores: E(): 6.5e-10, 33.98 38d in 153 aa, and over the entire length of Clostridium acetobutylicum secreted protein,similar to catalytic domain of murein transglycosylase cac1100 SWALL:Q97K21 (EMBL:AE007626) (183 aa) fasta scores: E(): 2.8e-38, 56.64 38d in 173 aa; transglycosylase SLT domain protein complement(3202805..3203350) Clostridium botulinum A str. ATCC 3502 5187272 YP_001255503.1 CDS coaE NC_009495.1 3203368 3204006 R catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase complement(3203368..3204006) Clostridium botulinum A str. ATCC 3502 5187273 YP_001255504.1 CDS polA NC_009495.1 3204018 3206645 R has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I complement(3204018..3206645) Clostridium botulinum A str. ATCC 3502 5187274 YP_001255505.1 CDS CBO3015 NC_009495.1 3206663 3207787 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(3206663..3207787) Clostridium botulinum A str. ATCC 3502 5187275 YP_001255506.1 CDS CBO3016 NC_009495.1 3207929 3208699 R Also similar to the prophage encoded CDSs, CBO1751 (50 38d), CBO2325 (48.8 0d.), CBO1653 (55.5 0d.); N-acetylmuramoyl-L-alanine amidase complement(3207929..3208699) Clostridium botulinum A str. ATCC 3502 5184478 YP_001255507.1 CDS CBO3017 NC_009495.1 3208846 3209040 R hypothetical protein complement(3208846..3209040) Clostridium botulinum A str. ATCC 3502 5184791 YP_001255508.1 CDS CBO3018 NC_009495.1 3209059 3209313 R hypothetical protein complement(3209059..3209313) Clostridium botulinum A str. ATCC 3502 5187268 YP_001255509.1 CDS CBO3019 NC_009495.1 3209469 3210383 R Similar to the veryC-terminus of the Clostridium tetani protein ctc01110. Weakly similar to the downstream CDS CB03020; hypothetical protein complement(3209469..3210383) Clostridium botulinum A str. ATCC 3502 5187269 YP_001255510.1 CDS CBO3020 NC_009495.1 3210457 3211440 R Weakly similar to the upstream CDS CB03019; hypothetical protein complement(3210457..3211440) Clostridium botulinum A str. ATCC 3502 5187280 YP_001255511.1 CDS CBO3021 NC_009495.1 3211552 3212892 R hypothetical protein complement(3211552..3212892) Clostridium botulinum A str. ATCC 3502 5187278 YP_001255512.1 CDS CBO3022 NC_009495.1 3212906 3214663 R . Note the product of this CDS is rich in the amino acids Asn and Ile.; hypothetical protein complement(3212906..3214663) Clostridium botulinum A str. ATCC 3502 5186998 YP_001255513.1 CDS CBO3023 NC_009495.1 3214761 3215846 R hypothetical protein complement(3214761..3215846) Clostridium botulinum A str. ATCC 3502 5187470 YP_001255514.1 CDS CBO3024 NC_009495.1 3215858 3216856 R hypothetical protein complement(3215858..3216856) Clostridium botulinum A str. ATCC 3502 5187277 YP_001255515.1 CDS CBO3025 NC_009495.1 3216868 3217122 R hypothetical protein complement(3216868..3217122) Clostridium botulinum A str. ATCC 3502 5187276 YP_001255516.1 CDS CBO3026 NC_009495.1 3217128 3219023 R Note the product of this CDS is rich in the amino acids Asn Leu and Ile.; hypothetical protein complement(3217128..3219023) Clostridium botulinum A str. ATCC 3502 5185918 YP_001255517.1 CDS CBO3027 NC_009495.1 3219038 3220276 R hypothetical protein complement(3219038..3220276) Clostridium botulinum A str. ATCC 3502 5187284 YP_001255518.1 CDS CBO3028 NC_009495.1 3220299 3221279 R Weakly similar to the downstream CDS CB03029; hypothetical protein complement(3220299..3221279) Clostridium botulinum A str. ATCC 3502 5187293 YP_001255519.1 CDS CBO3029 NC_009495.1 3221281 3222630 R Weakly similar to the upstream CDS CB03028; hypothetical protein complement(3221281..3222630) Clostridium botulinum A str. ATCC 3502 5186341 YP_001255520.1 CDS CBO3030 NC_009495.1 3222645 3222986 R Similar to Clostridium tetani protein ctc01102 SWALL:Q896A7 (EMBL:AE015939) (110 aa) fasta scores: E(): 9.8e-23, 56.36 38d in 110 aa; hypothetical protein complement(3222645..3222986) Clostridium botulinum A str. ATCC 3502 5186340 YP_001255521.1 CDS CBO3031 NC_009495.1 3222999 3224084 R hypothetical protein complement(3222999..3224084) Clostridium botulinum A str. ATCC 3502 5187288 YP_001255522.1 CDS CBO3031A NC_009495.1 3224071 3224514 R hypothetical protein complement(3224071..3224514) Clostridium botulinum A str. ATCC 3502 5204327 YP_001255523.1 CDS CBO3032 NC_009495.1 3224518 3226059 R Partial similarity to the C-terminus of several bacteriophage tail length determining proteins.; phage-like membrane protein complement(3224518..3226059) Clostridium botulinum A str. ATCC 3502 5186410 YP_001255524.1 CDS CBO3032A NC_009495.1 3226135 3226377 R Weakly similar to the very C-terminus of several Eukaryotic heat shock proteins; hypothetical protein complement(3226135..3226377) Clostridium botulinum A str. ATCC 3502 5204328 YP_001255525.1 CDS CBO3033 NC_009495.1 3226337 3226753 R Similar to Clostridium tetani protein ctc01097 SWALL:Q896B1 (EMBL:AE015939) (154 aa) fasta scores: E(): 1.6e-30, 68.11 38d in 138 aa; hypothetical protein complement(3226337..3226753) Clostridium botulinum A str. ATCC 3502 5186411 YP_001255526.1 CDS CBO3034 NC_009495.1 3226769 3227656 R hypothetical protein complement(3226769..3227656) Clostridium botulinum A str. ATCC 3502 5187291 YP_001255527.1 CDS CBO3035 NC_009495.1 3227661 3228080 R hypothetical protein complement(3227661..3228080) Clostridium botulinum A str. ATCC 3502 5186337 YP_001255528.1 CDS CBO3036 NC_009495.1 3228086 3228433 R hypothetical protein complement(3228086..3228433) Clostridium botulinum A str. ATCC 3502 5204329 YP_001255529.1 CDS CBO3037 NC_009495.1 3228438 3228803 R hypothetical protein complement(3228438..3228803) Clostridium botulinum A str. ATCC 3502 5187294 YP_001255530.1 CDS CBO3038 NC_009495.1 3228803 3229087 R hypothetical protein complement(3228803..3229087) Clostridium botulinum A str. ATCC 3502 5187295 YP_001255531.1 CDS CBO3039 NC_009495.1 3229774 3230295 R hypothetical protein complement(3229774..3230295) Clostridium botulinum A str. ATCC 3502 5187296 YP_001255532.1 CDS CBO3040 NC_009495.1 3230468 3230719 R hypothetical protein complement(3230468..3230719) Clostridium botulinum A str. ATCC 3502 5187297 YP_001255533.1 CDS CBO3041 NC_009495.1 3230776 3231624 R Similar to many phage replication and chromosome replication proteins; hypothetical protein complement(3230776..3231624) Clostridium botulinum A str. ATCC 3502 5187298 YP_001255534.1 CDS CBO3042 NC_009495.1 3231566 3232480 R Similar to Streptococcus mitis phage SM1 gp19 SWALL:AAP81901 (EMBL:AY007505) (265 aa) fasta scores: E(): 1.1e-24, 38.14 38d in 270 aa, and to Staphylococcus aureus prophage phiPV83 orf 20 SWALL:Q9MBR9 (EMBL:AB044554) (267 aa) fasta scores: E(): 2.3e-21, 33.33 38d in 288 aa; phage-like protein complement(3231566..3232480) Clostridium botulinum A str. ATCC 3502 5186342 YP_001255535.1 CDS CBO3043 NC_009495.1 3232565 3232798 R DNA-binding protein complement(3232565..3232798) Clostridium botulinum A str. ATCC 3502 5186339 YP_001255536.1 CDS CBO3044 NC_009495.1 3232839 3233057 R Similar to several bacteriophage Cro-like regulatory proteins; tracriptional regulatory protein complement(3232839..3233057) Clostridium botulinum A str. ATCC 3502 5187127 YP_001255537.1 CDS CBO3045 NC_009495.1 3233240 3233650 D DNA-binding protein 3233240..3233650 Clostridium botulinum A str. ATCC 3502 5187302 YP_001255538.1 CDS CBO3046 NC_009495.1 3235181 3236668 D alginate O-acetyltransferase AlgI 3235181..3236668 Clostridium botulinum A str. ATCC 3502 5186338 YP_001255539.1 CDS CBO3047 NC_009495.1 3236681 3238132 D hypothetical protein 3236681..3238132 Clostridium botulinum A str. ATCC 3502 5204330 YP_001255540.1 CDS CBO3048 NC_009495.1 3238304 3238507 R small acid-soluble spore protein complement(3238304..3238507) Clostridium botulinum A str. ATCC 3502 5184769 YP_001255541.1 CDS CBO3049 NC_009495.1 3238692 3238832 R hypothetical protein complement(3238692..3238832) Clostridium botulinum A str. ATCC 3502 5185122 YP_001255542.1 CDS CBO3050 NC_009495.1 3239071 3239190 R hypothetical protein complement(3239071..3239190) Clostridium botulinum A str. ATCC 3502 5186684 YP_001255543.1 CDS CBO3051 NC_009495.1 3239247 3239537 R hypothetical protein complement(3239247..3239537) Clostridium botulinum A str. ATCC 3502 5185458 YP_001255544.1 CDS CBO3052 NC_009495.1 3239678 3239806 R hypothetical protein complement(3239678..3239806) Clostridium botulinum A str. ATCC 3502 5184898 YP_001255545.1 CDS CBO3053 NC_009495.1 3239978 3240406 D sigma-E factor regulator, RseC/MucC family 3239978..3240406 Clostridium botulinum A str. ATCC 3502 5185626 YP_001255546.1 CDS aspS NC_009495.1 3240441 3242222 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(3240441..3242222) Clostridium botulinum A str. ATCC 3502 5185641 YP_001255547.1 CDS hisS NC_009495.1 3242263 3243510 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(3242263..3243510) Clostridium botulinum A str. ATCC 3502 5187316 YP_001255548.1 CDS CBO3056 NC_009495.1 3243529 3244959 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(3243529..3244959) Clostridium botulinum A str. ATCC 3502 5184555 YP_001255549.1 CDS CBO3057 NC_009495.1 3244997 3245596 R metallo-beta-lactamase complement(3244997..3245596) Clostridium botulinum A str. ATCC 3502 5186808 YP_001255550.1 CDS dtd NC_009495.1 3245657 3246106 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(3245657..3246106) Clostridium botulinum A str. ATCC 3502 5187267 YP_001255551.1 CDS relA NC_009495.1 3246149 3248320 R GTP pyrophosphokinase complement(3246149..3248320) Clostridium botulinum A str. ATCC 3502 5186150 YP_001255552.1 CDS apt NC_009495.1 3248444 3248962 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(3248444..3248962) Clostridium botulinum A str. ATCC 3502 5186844 YP_001255553.1 CDS CBO3061 NC_009495.1 3249071 3249949 R Similar to N-terminal region of Escherichia coli single-stranded-DNA-specific exonuclease RecJ or b2892 SWALL:RECJ_ECOLI (SWALL:P21893) (577 aa) fasta scores: E(): 1.6e-09, 26.38 38d in 288 aa; DHH domain-containing protein complement(3249071..3249949) Clostridium botulinum A str. ATCC 3502 5187529 YP_001255554.1 CDS secF NC_009495.1 3250178 3251041 R forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF complement(3250178..3251041) Clostridium botulinum A str. ATCC 3502 5187837 YP_001255555.1 CDS secD NC_009495.1 3251043 3252311 R part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD complement(3251043..3252311) Clostridium botulinum A str. ATCC 3502 5187320 YP_001255556.1 CDS CBO3064 NC_009495.1 3252405 3253772 R Partially similar to Escherichia coli arylsulfatase regulatory protein AslB or AtsB or b3800 SWALL:ASLB_ECOLI (SWALL:P25550) (411 aa) fasta scores: E(): 0.02, 24.22 38d in 355 aa; radical SAM domain protein complement(3252405..3253772) Clostridium botulinum A str. ATCC 3502 5186873 YP_001255557.1 CDS CBO3065 NC_009495.1 3253929 3254066 R hypothetical protein complement(3253929..3254066) Clostridium botulinum A str. ATCC 3502 5186267 YP_001255558.1 CDS CBO3066 NC_009495.1 3254156 3254524 R hypothetical protein complement(3254156..3254524) Clostridium botulinum A str. ATCC 3502 5187980 YP_001255559.1 CDS yajC NC_009495.1 3254579 3254914 R member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC complement(3254579..3254914) Clostridium botulinum A str. ATCC 3502 5186887 YP_001255560.1 CDS tgt NC_009495.1 3255094 3256224 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(3255094..3256224) Clostridium botulinum A str. ATCC 3502 5185716 YP_001255561.1 CDS queA NC_009495.1 3256280 3257305 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(3256280..3257305) Clostridium botulinum A str. ATCC 3502 5186431 YP_001255562.1 CDS ruvB NC_009495.1 3257339 3258367 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(3257339..3258367) Clostridium botulinum A str. ATCC 3502 5187121 YP_001255563.1 CDS ruvA NC_009495.1 3258387 3258980 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(3258387..3258980) Clostridium botulinum A str. ATCC 3502 5187366 YP_001255564.1 CDS CBO3072 NC_009495.1 3259162 3259773 R hypothetical protein complement(3259162..3259773) Clostridium botulinum A str. ATCC 3502 5187387 YP_001255565.1 CDS CBO3073 NC_009495.1 3260150 3260890 R hypothetical protein complement(3260150..3260890) Clostridium botulinum A str. ATCC 3502 5187330 YP_001255566.1 CDS CBO3074 NC_009495.1 3261041 3261691 R hypothetical protein complement(3261041..3261691) Clostridium botulinum A str. ATCC 3502 5186760 YP_001255567.1 CDS CBO3075 NC_009495.1 3261707 3262369 R PBS lyase HEAT-like repeat protein complement(3261707..3262369) Clostridium botulinum A str. ATCC 3502 5187329 YP_001255568.1 CDS CBO3076 NC_009495.1 3262457 3263875 R GntR family transcriptional regulator complement(3262457..3263875) Clostridium botulinum A str. ATCC 3502 5187335 YP_001255569.1 CDS CBO3077 NC_009495.1 3264161 3265054 R nucleotidyltransferase domain protein complement(3264161..3265054) Clostridium botulinum A str. ATCC 3502 5187332 YP_001255570.1 CDS CBO3078 NC_009495.1 3265204 3265425 R hypothetical protein complement(3265204..3265425) Clostridium botulinum A str. ATCC 3502 5187333 YP_001255571.1 CDS rub NC_009495.1 3265598 3265756 R rubredoxin complement(3265598..3265756) Clostridium botulinum A str. ATCC 3502 5184794 YP_001255572.1 CDS hflX NC_009495.1 3265885 3267669 R GTP-binding protein complement(3265885..3267669) Clostridium botulinum A str. ATCC 3502 5187339 YP_001255573.1 CDS hpt NC_009495.1 3267789 3268334 D hypoxanthine phosphoribosyltransferase 3267789..3268334 Clostridium botulinum A str. ATCC 3502 5187338 YP_001255574.1 CDS CBO3082 NC_009495.1 3268371 3268925 R hypothetical protein complement(3268371..3268925) Clostridium botulinum A str. ATCC 3502 5187344 YP_001255575.1 CDS CBO3083 NC_009495.1 3269197 3271689 D penicillin-binding protein, 1A family 3269197..3271689 Clostridium botulinum A str. ATCC 3502 5185759 YP_001255576.1 CDS spoVAC1 NC_009495.1 3271719 3272075 R SpoVA family protein complement(3271719..3272075) Clostridium botulinum A str. ATCC 3502 5187336 YP_001255577.1 CDS spoVAD NC_009495.1 3272091 3273098 R stage V sporulation protein AD complement(3272091..3273098) Clostridium botulinum A str. ATCC 3502 5187343 YP_001255578.1 CDS spoVAC2 NC_009495.1 3273121 3273576 R SpoVA family protein complement(3273121..3273576) Clostridium botulinum A str. ATCC 3502 5186042 YP_001255579.1 CDS sigF NC_009495.1 3273778 3274533 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the prespore at the onset of sporulation. Interaction with spoIIAB inhibits sigma F activity throughout the cell before the formation of the asymmetric septum; after septation the interaction is confined to the mother cell, and sigma F activity is released in the prespore.; sporulation sigma factor SigF complement(3273778..3274533) Clostridium botulinum A str. ATCC 3502 5187340 YP_001255580.1 CDS spoIIAB NC_009495.1 3274552 3274974 R binds to sigma F preventing its association with RNA polymerase during sporulation; anti-sigma F factor complement(3274552..3274974) Clostridium botulinum A str. ATCC 3502 5186445 YP_001255581.1 CDS spoIIAA NC_009495.1 3274991 3275326 R anti-sigma F factor antagonist complement(3274991..3275326) Clostridium botulinum A str. ATCC 3502 5187346 YP_001255582.1 CDS CBO3090 NC_009495.1 3275627 3277372 R modification methylase complement(3275627..3277372) Clostridium botulinum A str. ATCC 3502 5186962 YP_001255583.1 CDS pdaA NC_009495.1 3277427 3278401 D polysaccharide deacetylase 3277427..3278401 Clostridium botulinum A str. ATCC 3502 5185027 YP_001255584.1 CDS tagA NC_009495.1 3278490 3279206 R WecB/TagA/CpsF family glycosyl transferase complement(3278490..3279206) Clostridium botulinum A str. ATCC 3502 5187238 YP_001255585.1 CDS CBO3093 NC_009495.1 3279534 3280187 R sugar transferase complement(3279534..3280187) Clostridium botulinum A str. ATCC 3502 5185486 YP_001255586.1 CDS wzx NC_009495.1 3280208 3281632 R O antigen repeat-containing flippase complement(3280208..3281632) Clostridium botulinum A str. ATCC 3502 5187202 YP_001255587.1 CDS CBO3095 NC_009495.1 3282030 3283586 R integral membrane protein MviN complement(3282030..3283586) Clostridium botulinum A str. ATCC 3502 5185774 YP_001255588.1 CDS CBO3096 NC_009495.1 3283605 3284708 R glycoside hydrolase family protein complement(3283605..3284708) Clostridium botulinum A str. ATCC 3502 5186473 YP_001255589.1 CDS CBO3097 NC_009495.1 3284818 3285945 R glycoside hydrolase family protein complement(3284818..3285945) Clostridium botulinum A str. ATCC 3502 5187826 YP_001255590.1 CDS wzy NC_009495.1 3286060 3287292 R exopolysaccharide biosynthesis family protein complement(3286060..3287292) Clostridium botulinum A str. ATCC 3502 5186857 YP_001255591.1 CDS CBO3099 NC_009495.1 3287370 3288596 R glycoside hydrolase family protein complement(3287370..3288596) Clostridium botulinum A str. ATCC 3502 5187657 YP_001255592.1 CDS CBO3100 NC_009495.1 3288615 3289673 R UDP-N-acetylglucosamine 2-epimerase complement(3288615..3289673) Clostridium botulinum A str. ATCC 3502 5187201 YP_001255593.1 CDS CBO3101 NC_009495.1 3289673 3290767 R glycoside hydrolase family protein complement(3289673..3290767) Clostridium botulinum A str. ATCC 3502 5185081 YP_001255594.1 CDS CBO3102 NC_009495.1 3290790 3291893 R hypothetical protein complement(3290790..3291893) Clostridium botulinum A str. ATCC 3502 5187359 YP_001255595.1 CDS wzy NC_009495.1 3291883 3293301 R oligosaccharide repeat-containing polymerase complement(3291883..3293301) Clostridium botulinum A str. ATCC 3502 5186437 YP_001255596.1 CDS CBO3104 NC_009495.1 3293316 3294410 R Similar to N-terminal region of Bacillus cereus internalin protein bc0552 SWALL:Q81I65 (EMBL:AE016999) (886 aa) fasta scores: E(): 7.1e-21, 30.16 38d in 358 aa,and to C-terminal region of Clostridium acetobutylicum possible surface protein, responsible for cell interaction, contains cell adhesion domain and chw-repeats cac3279 SWALL:Q97E37 (EMBL:AE007824) (808 aa) fasta scores: E(): 3.3e-26, 35.25 38d in 312 aa; capsular polysaccharide biosynthesis protein complement(3293316..3294410) Clostridium botulinum A str. ATCC 3502 5187875 YP_001255597.1 CDS wzx NC_009495.1 3294447 3295754 R polysaccharide biosynthesis protein complement(3294447..3295754) Clostridium botulinum A str. ATCC 3502 5186537 YP_001255598.1 CDS CBO3106 NC_009495.1 3295785 3296531 R acetyltransferase complement(3295785..3296531) Clostridium botulinum A str. ATCC 3502 5186725 YP_001255599.1 CDS CBO3107 NC_009495.1 3296631 3297740 R oxidoreductase, NAD-binding Rossmann fold family complement(3296631..3297740) Clostridium botulinum A str. ATCC 3502 5185083 YP_001255600.1 CDS CBO3108 NC_009495.1 3297803 3299119 R UDP-glucose/GDP-mannose dehydrogenase complement(3297803..3299119) Clostridium botulinum A str. ATCC 3502 5186453 YP_001255601.1 CDS CBO3109 NC_009495.1 3299249 3301114 R exopolysaccharide biosynthesis protein complement(3299249..3301114) Clostridium botulinum A str. ATCC 3502 5184772 YP_001255602.1 CDS CBO3110 NC_009495.1 3301295 3304144 R .; similar to CBO3111 (42.304 38d. in 955 aa overlap).; N-acetylmuramoyl-L-alanine amidase complement(3301295..3304144) Clostridium botulinum A str. ATCC 3502 5185096 YP_001255603.1 CDS CBO3111 NC_009495.1 3304381 3307284 R .; similar to CBO3110 (42.304 38d. in 955 aa overlap).; N-acetylmuramoyl-L-alanine amidase complement(3304381..3307284) Clostridium botulinum A str. ATCC 3502 5185656 YP_001255604.1 CDS gtaB NC_009495.1 3307383 3308279 R UTP-glucose-1-phosphate uridylyltransferase complement(3307383..3308279) Clostridium botulinum A str. ATCC 3502 5184455 YP_001255605.1 CDS CBO3113 NC_009495.1 3308329 3309405 R capsular polysaccharide biosynthesis protein complement(3308329..3309405) Clostridium botulinum A str. ATCC 3502 5184463 YP_001255606.1 CDS pgcA NC_009495.1 3309550 3311277 R phosphoglucomutase/phosphomannomutase complement(3309550..3311277) Clostridium botulinum A str. ATCC 3502 5187034 YP_001255607.1 CDS ctc NC_009495.1 3312263 3312799 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 complement(3312263..3312799) Clostridium botulinum A str. ATCC 3502 5186232 YP_001255608.1 CDS speA NC_009495.1 3313006 3314466 D Orn/Lys/Arg decarboxylase 3313006..3314466 Clostridium botulinum A str. ATCC 3502 5187547 YP_001255609.1 CDS CBO3117 NC_009495.1 3314651 3315484 R hypothetical protein complement(3314651..3315484) Clostridium botulinum A str. ATCC 3502 5186227 YP_001255610.1 CDS ptb1 NC_009495.1 3315682 3316584 R Also similar to CBO3427 (53.37 38d); phosphate acetyl/butyryl transferase complement(3315682..3316584) Clostridium botulinum A str. ATCC 3502 5187886 YP_001255611.1 CDS CBO3119 NC_009495.1 3317028 3318041 R dehydrogenase, FMN-dependent complement(3317028..3318041) Clostridium botulinum A str. ATCC 3502 5187848 YP_001255612.1 CDS CBO3120 NC_009495.1 3318277 3318747 R hypothetical protein complement(3318277..3318747) Clostridium botulinum A str. ATCC 3502 5186481 YP_001255613.1 CDS CBO3121 NC_009495.1 3318935 3321301 R MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein complement(3318935..3321301) Clostridium botulinum A str. ATCC 3502 5187975 YP_001255614.1 CDS CBO3122 NC_009495.1 3321434 3323800 R peptidase, U32 family complement(3321434..3323800) Clostridium botulinum A str. ATCC 3502 5187381 YP_001255615.1 CDS CBO3123 NC_009495.1 3324374 3325252 R hypothetical protein complement(3324374..3325252) Clostridium botulinum A str. ATCC 3502 5187377 YP_001255616.1 CDS CBO3124 NC_009495.1 3325458 3327284 D hypothetical protein 3325458..3327284 Clostridium botulinum A str. ATCC 3502 5187379 YP_001255617.1 CDS CBO3125 NC_009495.1 3327455 3327607 R hypothetical protein complement(3327455..3327607) Clostridium botulinum A str. ATCC 3502 5187382 YP_001255618.1 CDS CBO3126 NC_009495.1 3327787 3328065 R hypothetical protein complement(3327787..3328065) Clostridium botulinum A str. ATCC 3502 5187976 YP_001255619.1 CDS CBO3129 NC_009495.1 3328904 3329494 R hypothetical protein complement(3328904..3329494) Clostridium botulinum A str. ATCC 3502 5187384 YP_001255620.1 CDS pheT NC_009495.1 3329699 3332080 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(3329699..3332080) Clostridium botulinum A str. ATCC 3502 5187224 YP_001255621.1 CDS pheS NC_009495.1 3332241 3333260 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(3332241..3333260) Clostridium botulinum A str. ATCC 3502 5185223 YP_001255622.1 CDS CBO3132 NC_009495.1 3333608 3334387 R RNA methyltransferase, TrmH family complement(3333608..3334387) Clostridium botulinum A str. ATCC 3502 5186655 YP_001255623.1 CDS CBO3133 NC_009495.1 3334478 3335140 R potassium uptake protein, TrkA family complement(3334478..3335140) Clostridium botulinum A str. ATCC 3502 5186772 YP_001255624.1 CDS CBO3134 NC_009495.1 3335151 3336494 R potassium uptake protein, TrkH family complement(3335151..3336494) Clostridium botulinum A str. ATCC 3502 5187389 YP_001255625.1 CDS rplT NC_009495.1 3336618 3336977 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(3336618..3336977) Clostridium botulinum A str. ATCC 3502 5188007 YP_001255626.1 CDS rpmI NC_009495.1 3337007 3337204 R 50S ribosomal protein L35 complement(3337007..3337204) Clostridium botulinum A str. ATCC 3502 5187395 YP_001255627.1 CDS infC NC_009495.1 3337226 3337747 R IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 complement(3337226..3337747) Clostridium botulinum A str. ATCC 3502 5187394 YP_001255628.1 CDS thrS NC_009495.1 3338035 3339942 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(3338035..3339942) Clostridium botulinum A str. ATCC 3502 5186859 YP_001255629.1 CDS CBO3139 NC_009495.1 3340290 3341189 R hypothetical protein complement(3340290..3341189) Clostridium botulinum A str. ATCC 3502 5187393 YP_001255630.1 CDS CBO3140 NC_009495.1 3341344 3342051 D hypothetical protein 3341344..3342051 Clostridium botulinum A str. ATCC 3502 5187392 YP_001255631.1 CDS CBO3141 NC_009495.1 3342259 3343830 R ABC transporter permease complement(3342259..3343830) Clostridium botulinum A str. ATCC 3502 5187399 YP_001255632.1 CDS CBO3142 NC_009495.1 3343832 3344527 R ABC transporter ATP-binding protein complement(3343832..3344527) Clostridium botulinum A str. ATCC 3502 5187360 YP_001255633.1 CDS hslO NC_009495.1 3345434 3346324 R becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin complement(3345434..3346324) Clostridium botulinum A str. ATCC 3502 5184258 YP_001255634.1 CDS CBO3144 NC_009495.1 3346362 3347102 R hypothetical protein complement(3346362..3347102) Clostridium botulinum A str. ATCC 3502 5187398 YP_001255635.1 CDS CBO3145 NC_009495.1 3347188 3347460 R small acid-soluble spore protein complement(3347188..3347460) Clostridium botulinum A str. ATCC 3502 5187403 YP_001255636.1 CDS oppF NC_009495.1 3347759 3348718 R oligopeptide/dipeptide ABC transporter ATP-binding protein complement(3347759..3348718) Clostridium botulinum A str. ATCC 3502 5187401 YP_001255637.1 CDS oppD NC_009495.1 3348718 3349740 R oligopeptide/dipeptide ABC transporter ATP-binding protein complement(3348718..3349740) Clostridium botulinum A str. ATCC 3502 5184882 YP_001255638.1 CDS oppC NC_009495.1 3349751 3350668 R oligopeptide/dipeptide ABC transporter permease complement(3349751..3350668) Clostridium botulinum A str. ATCC 3502 5187405 YP_001255639.1 CDS oppB NC_009495.1 3350684 3351613 R oligopeptide/dipeptide ABC transporter permease complement(3350684..3351613) Clostridium botulinum A str. ATCC 3502 5187406 YP_001255640.1 CDS oppA NC_009495.1 3351694 3353376 R oligopeptide/dipeptide ABC transporter oligopeptide/dipeptide-binding protein complement(3351694..3353376) Clostridium botulinum A str. ATCC 3502 5186999 YP_001255641.1 CDS asd NC_009495.1 3353861 3354853 D aspartate-semialdehyde dehydrogenase 3353861..3354853 Clostridium botulinum A str. ATCC 3502 5185943 YP_001255642.1 CDS dapA NC_009495.1 3354876 3355754 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 3354876..3355754 Clostridium botulinum A str. ATCC 3502 5187877 YP_001255643.1 CDS dapB NC_009495.1 3355977 3356732 D catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 3355977..3356732 Clostridium botulinum A str. ATCC 3502 5186896 YP_001255644.1 CDS CBO3154 NC_009495.1 3357272 3358441 R aminotransferase, classes I and II complement(3357272..3358441) Clostridium botulinum A str. ATCC 3502 5186443 YP_001255645.1 CDS CBO3156 NC_009495.1 3358699 3359409 D 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 3358699..3359409 Clostridium botulinum A str. ATCC 3502 5184971 YP_001255646.1 CDS CBO3157 NC_009495.1 3359525 3360226 R binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein complement(3359525..3360226) Clostridium botulinum A str. ATCC 3502 5187412 YP_001255647.1 CDS CBO3158 NC_009495.1 3360304 3360801 R hypothetical protein complement(3360304..3360801) Clostridium botulinum A str. ATCC 3502 5187433 YP_001255648.1 CDS CBO3159 NC_009495.1 3361000 3361752 R polysaccharide deacetylase complement(3361000..3361752) Clostridium botulinum A str. ATCC 3502 5187786 YP_001255649.1 CDS CBO3160 NC_009495.1 3361916 3362443 D hypothetical protein 3361916..3362443 Clostridium botulinum A str. ATCC 3502 5185650 YP_001255650.1 CDS CBO3161 NC_009495.1 3362446 3363330 R Contains 6x degenerate repeat; hypothetical protein complement(3362446..3363330) Clostridium botulinum A str. ATCC 3502 5187424 YP_001255651.1 CDS CBO3162 NC_009495.1 3363470 3363730 D hypothetical protein 3363470..3363730 Clostridium botulinum A str. ATCC 3502 5187420 YP_001255652.1 CDS folC NC_009495.1 3363739 3365028 R bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(3363739..3365028) Clostridium botulinum A str. ATCC 3502 5187417 YP_001255653.1 CDS valS NC_009495.1 3365474 3368119 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(3365474..3368119) Clostridium botulinum A str. ATCC 3502 5187423 YP_001255654.1 CDS CBO3165 NC_009495.1 3368140 3368646 R GNAT family acetyltransferase complement(3368140..3368646) Clostridium botulinum A str. ATCC 3502 5187425 YP_001255655.1 CDS CBO3166 NC_009495.1 3369100 3369855 R ABC transporter ATP-binding protein complement(3369100..3369855) Clostridium botulinum A str. ATCC 3502 5187419 YP_001255656.1 CDS CBO3167 NC_009495.1 3369858 3371483 R ABC transporter permease complement(3369858..3371483) Clostridium botulinum A str. ATCC 3502 5187427 YP_001255657.1 CDS CBO3168 NC_009495.1 3371584 3372192 R integral membrane protein complement(3371584..3372192) Clostridium botulinum A str. ATCC 3502 5187418 YP_001255658.1 CDS CBO3169 NC_009495.1 3372614 3373642 D ABC transporter periplasmic-binding protein 3372614..3373642 Clostridium botulinum A str. ATCC 3502 5187422 YP_001255659.1 CDS CBO3170 NC_009495.1 3374003 3378295 R similarity to activators of 2-hydroxyacyl-CoA dehydratases is confined to the N-terminal region; Also similar to CBO1130 (62.2 38d).; CoA-substrate-specific enzyme activase complement(3374003..3378295) Clostridium botulinum A str. ATCC 3502 5187060 YP_001255660.1 CDS CBO3171 NC_009495.1 3378617 3379378 D ABC transporter ATP-binding protein 3378617..3379378 Clostridium botulinum A str. ATCC 3502 5187699 YP_001255661.1 CDS CBO3172 NC_009495.1 3379375 3380178 D ABC transporter permease 3379375..3380178 Clostridium botulinum A str. ATCC 3502 5184418 YP_001255662.1 CDS CBO3173 NC_009495.1 3380322 3380669 D hypothetical protein 3380322..3380669 Clostridium botulinum A str. ATCC 3502 5187026 YP_001255663.1 CDS CBO3174 NC_009495.1 3380792 3381976 R transglutaminase domain protein complement(3380792..3381976) Clostridium botulinum A str. ATCC 3502 5187495 YP_001255664.1 CDS recX NC_009495.1 3381992 3382927 R binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX complement(3381992..3382927) Clostridium botulinum A str. ATCC 3502 5187415 YP_001255665.1 CDS CBO3176 NC_009495.1 3382949 3384178 R peptidase, M16 family complement(3382949..3384178) Clostridium botulinum A str. ATCC 3502 5187314 YP_001255666.1 CDS CBO3177 NC_009495.1 3384399 3384902 D hypothetical protein 3384399..3384902 Clostridium botulinum A str. ATCC 3502 5187386 YP_001255667.1 CDS CBO3178 NC_009495.1 3384940 3385527 D flavin reductase 3384940..3385527 Clostridium botulinum A str. ATCC 3502 5184787 YP_001255668.1 CDS CBO3179 NC_009495.1 3385584 3386279 D Contains Pfam matches (PF03734, PF01471) which suggests that this is an enzyme which interacts with peptidoglycan.; ErfK/YbiS/YcfS/YnhG family protein 3385584..3386279 Clostridium botulinum A str. ATCC 3502 5184789 YP_001255669.1 CDS CBO3180 NC_009495.1 3386314 3387189 R hypothetical protein complement(3386314..3387189) Clostridium botulinum A str. ATCC 3502 5187434 YP_001255670.1 CDS CBO3181 NC_009495.1 3387231 3387509 R hypothetical protein complement(3387231..3387509) Clostridium botulinum A str. ATCC 3502 5187967 YP_001255671.1 CDS proC NC_009495.1 3387637 3388443 R catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase complement(3387637..3388443) Clostridium botulinum A str. ATCC 3502 5185765 YP_001255672.1 CDS CBO3183 NC_009495.1 3388555 3390918 R formate acetyltransferase complement(3388555..3390918) Clostridium botulinum A str. ATCC 3502 5187971 YP_001255673.1 CDS CBO3184 NC_009495.1 3390925 3391683 R glycyl-radical activating family protein complement(3390925..3391683) Clostridium botulinum A str. ATCC 3502 5187451 YP_001255674.1 CDS CBO3185 NC_009495.1 3391891 3392460 R DNA-binding protein complement(3391891..3392460) Clostridium botulinum A str. ATCC 3502 5187440 YP_001255675.1 CDS CBO3186 NC_009495.1 3393095 3393823 R Similar to the C-terminal portion of predicted DNA ligases (CAE10810, DNLJ_BACSU).; BRCT domain-containing protein complement(3393095..3393823) Clostridium botulinum A str. ATCC 3502 5187441 YP_001255676.1 CDS CBO3187 NC_009495.1 3393860 3394201 R hypothetical protein complement(3393860..3394201) Clostridium botulinum A str. ATCC 3502 5187449 YP_001255677.1 CDS CBO3188 NC_009495.1 3394213 3395949 R von Willebrand factor A complement(3394213..3395949) Clostridium botulinum A str. ATCC 3502 5187445 YP_001255678.1 CDS CBO3189 NC_009495.1 3395972 3397300 R ATPase AAA complement(3395972..3397300) Clostridium botulinum A str. ATCC 3502 5187446 YP_001255679.1 CDS CBO3190 NC_009495.1 3397923 3398999 D Identical CBO2471 (99.7), also similar to CBO3191 (53.5) and similar to the upstream CDS (CBO2470, 53.8).; hypothetical protein 3397923..3398999 Clostridium botulinum A str. ATCC 3502 5185682 YP_001255680.1 CDS CBO3191 NC_009495.1 3399068 3400153 D Identical CBO2470 (99.7), also similar to CBO3190 (53.5) and similar to the upstream CDS (CBO2471, 53.5).; hypothetical protein 3399068..3400153 Clostridium botulinum A str. ATCC 3502 5184579 YP_001255681.1 CDS CBO3192 NC_009495.1 3400332 3400526 R (Fe-S)-binding protein complement(3400332..3400526) Clostridium botulinum A str. ATCC 3502 5184578 YP_001255682.1 CDS CBO3193 NC_009495.1 3400769 3401662 D hypothetical protein 3400769..3401662 Clostridium botulinum A str. ATCC 3502 5187450 YP_001255683.1 CDS CBO3194 NC_009495.1 3401653 3402762 D R-2-hydroxyglutaryl-CoA dehydratase subunit 3401653..3402762 Clostridium botulinum A str. ATCC 3502 5185676 YP_001255684.1 CDS CBO3195 NC_009495.1 3402743 3403717 D CoA-substrate-specific enzyme activase 3402743..3403717 Clostridium botulinum A str. ATCC 3502 5185677 YP_001255685.1 CDS CBO3196 NC_009495.1 3403786 3405414 R sigma-54 dependent transcriptional regulator complement(3403786..3405414) Clostridium botulinum A str. ATCC 3502 5187443 YP_001255686.1 CDS CBO3197 NC_009495.1 3405772 3406776 R electron transfer flavoprotein subunit alpha/FixB family protein complement(3405772..3406776) Clostridium botulinum A str. ATCC 3502 5187979 YP_001255687.1 CDS CBO3198 NC_009495.1 3406792 3407571 R electron transfer flavoprotein subunit beta/FixA family protein complement(3406792..3407571) Clostridium botulinum A str. ATCC 3502 5187760 YP_001255688.1 CDS bcd NC_009495.1 3407583 3408722 R butyryl-CoA dehydrogenase complement(3407583..3408722) Clostridium botulinum A str. ATCC 3502 5186157 YP_001255689.1 CDS thl NC_009495.1 3408916 3410109 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase complement(3408916..3410109) Clostridium botulinum A str. ATCC 3502 5187759 YP_001255690.1 CDS hbd NC_009495.1 3410119 3410949 R 3-hydroxybutyryl-CoA dehydrogenase complement(3410119..3410949) Clostridium botulinum A str. ATCC 3502 5187159 YP_001255691.1 CDS crt NC_009495.1 3410980 3411762 R 3-hydroxybutyryl-CoA dehydratase complement(3410980..3411762) Clostridium botulinum A str. ATCC 3502 5185162 YP_001255692.1 CDS CBO3203 NC_009495.1 3412178 3412396 R hypothetical protein complement(3412178..3412396) Clostridium botulinum A str. ATCC 3502 5186273 YP_001255693.1 CDS CBO3204 NC_009495.1 3412440 3413537 R GIY-YIG domain-containing protein complement(3412440..3413537) Clostridium botulinum A str. ATCC 3502 5185698 YP_001255694.1 CDS CBO3205 NC_009495.1 3413813 3415105 R xanthine/uracil permease complement(3413813..3415105) Clostridium botulinum A str. ATCC 3502 5187656 YP_001255695.1 CDS CBO3206 NC_009495.1 3415507 3416403 R May interact with DNA.; HDIG domain protein complement(3415507..3416403) Clostridium botulinum A str. ATCC 3502 5187031 YP_001255696.1 CDS CBO3207 NC_009495.1 3416471 3416623 R hypothetical protein complement(3416471..3416623) Clostridium botulinum A str. ATCC 3502 5187516 YP_001255697.1 CDS CBO3208 NC_009495.1 3416788 3416937 R hypothetical protein complement(3416788..3416937) Clostridium botulinum A str. ATCC 3502 5184465 YP_001255698.1 CDS lgt NC_009495.1 3417009 3417773 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(3417009..3417773) Clostridium botulinum A str. ATCC 3502 5187464 YP_001255699.1 CDS CBO3210 NC_009495.1 3417982 3418446 R phosphodiesterase complement(3417982..3418446) Clostridium botulinum A str. ATCC 3502 5184430 YP_001255700.1 CDS CBO3211 NC_009495.1 3418489 3418854 R hypothetical protein complement(3418489..3418854) Clostridium botulinum A str. ATCC 3502 5184317 YP_001255701.1 CDS glpQ NC_009495.1 3418985 3419740 D glycerophosphoryl diester phosphodiesterase 3418985..3419740 Clostridium botulinum A str. ATCC 3502 5185912 YP_001255702.1 CDS CBO3213 NC_009495.1 3419836 3421842 R methyl-accepting chemotaxis protein complement(3419836..3421842) Clostridium botulinum A str. ATCC 3502 5185424 YP_001255703.1 CDS CBO3214 NC_009495.1 3422037 3422582 R rubredoxin/rubrerythrin complement(3422037..3422582) Clostridium botulinum A str. ATCC 3502 5186770 YP_001255704.1 CDS act NC_009495.1 3423224 3423922 R pyruvate formate-lyase activating enzyme complement(3423224..3423922) Clostridium botulinum A str. ATCC 3502 5187414 YP_001255705.1 CDS pflA NC_009495.1 3424102 3426330 R formate acetyltransferase 1 complement(3424102..3426330) Clostridium botulinum A str. ATCC 3502 5184387 YP_001255706.1 CDS CBO3217 NC_009495.1 3426842 3427093 R hypothetical protein complement(3426842..3427093) Clostridium botulinum A str. ATCC 3502 5186723 YP_001255707.1 CDS CBO3218 NC_009495.1 3427521 3428090 R ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 complement(3427521..3428090) Clostridium botulinum A str. ATCC 3502 5184943 YP_001255708.1 CDS CBO3219 NC_009495.1 3428257 3428871 R lipoprotein complement(3428257..3428871) Clostridium botulinum A str. ATCC 3502 5186762 YP_001255709.1 CDS CBO3220 NC_009495.1 3429097 3429525 D FUR family transcriptional regulator 3429097..3429525 Clostridium botulinum A str. ATCC 3502 5186466 YP_001255710.1 CDS CBO3221 NC_009495.1 3429594 3430835 R extracellular solute-binding protein complement(3429594..3430835) Clostridium botulinum A str. ATCC 3502 5184929 YP_001255711.1 CDS CBO3222 NC_009495.1 3430930 3431865 D hypothetical protein 3430930..3431865 Clostridium botulinum A str. ATCC 3502 5187216 YP_001255712.1 CDS CBO3223 NC_009495.1 3432025 3432981 R hypothetical protein complement(3432025..3432981) Clostridium botulinum A str. ATCC 3502 5187231 YP_001255713.1 CDS CBO3224 NC_009495.1 3433196 3433606 R Asp/Asn-rich in the central portion; hypothetical protein complement(3433196..3433606) Clostridium botulinum A str. ATCC 3502 5187479 YP_001255714.1 CDS CBO3224A NC_009495.1 3433661 3433906 R Shares sequence conservation with upstream CDS; hypothetical protein complement(3433661..3433906) Clostridium botulinum A str. ATCC 3502 5204331 YP_001255715.1 CDS CBO3225 NC_009495.1 3433958 3434386 R Shares sequence conservation with downstream CDS; hypothetical protein complement(3433958..3434386) Clostridium botulinum A str. ATCC 3502 5187607 YP_001255716.1 CDS CBO3226 NC_009495.1 3434605 3435330 R CAAX amino terminal protease complement(3434605..3435330) Clostridium botulinum A str. ATCC 3502 5187004 YP_001255717.1 CDS engB NC_009495.1 3435354 3435938 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(3435354..3435938) Clostridium botulinum A str. ATCC 3502 5185397 YP_001255718.1 CDS lonA NC_009495.1 3435953 3438274 R Contains N-terminal hydrophobic region suggesting an interaction with membrane.; ATP-dependent protease La complement(3435953..3438274) Clostridium botulinum A str. ATCC 3502 5187184 YP_001255719.1 CDS lonB NC_009495.1 3438412 3440091 R Bacillus subtilis orthologue restricted to the prespore compartment of sporulating cells.; ATP-dependent protease complement(3438412..3440091) Clostridium botulinum A str. ATCC 3502 5186804 YP_001255720.1 CDS clpX NC_009495.1 3440219 3441508 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(3440219..3441508) Clostridium botulinum A str. ATCC 3502 5187485 YP_001255721.1 CDS clpP NC_009495.1 3441528 3442112 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(3441528..3442112) Clostridium botulinum A str. ATCC 3502 5187372 YP_001255722.1 CDS tig NC_009495.1 3442238 3443530 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(3442238..3443530) Clostridium botulinum A str. ATCC 3502 5185113 YP_001255723.1 CDS CBO3233 NC_009495.1 3443708 3444493 R AP endonuclease, family 2 complement(3443708..3444493) Clostridium botulinum A str. ATCC 3502 5187695 YP_001255724.1 CDS CBO3234 NC_009495.1 3444600 3445412 R hypothetical protein complement(3444600..3445412) Clostridium botulinum A str. ATCC 3502 5187349 YP_001255725.1 CDS pyrE NC_009495.1 3445626 3446201 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(3445626..3446201) Clostridium botulinum A str. ATCC 3502 5186878 YP_001255726.1 CDS pyrD NC_009495.1 3446235 3447131 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B complement(3446235..3447131) Clostridium botulinum A str. ATCC 3502 5186922 YP_001255727.1 CDS pyrK NC_009495.1 3447131 3447886 R responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+); dihydroorotate dehydrogenase electron transfer subunit complement(3447131..3447886) Clostridium botulinum A str. ATCC 3502 5184275 YP_001255728.1 CDS pyrF NC_009495.1 3448031 3448882 R type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(3448031..3448882) Clostridium botulinum A str. ATCC 3502 5187132 YP_001255729.1 CDS pyrC NC_009495.1 3448906 3450096 R dihydroorotase, multifunctional complex type complement(3448906..3450096) Clostridium botulinum A str. ATCC 3502 5187851 YP_001255730.1 CDS pyrI NC_009495.1 3450118 3450558 R involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase complement(3450118..3450558) Clostridium botulinum A str. ATCC 3502 5187484 YP_001255731.1 CDS pyrB NC_009495.1 3450560 3451483 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase complement(3450560..3451483) Clostridium botulinum A str. ATCC 3502 5187965 YP_001255732.1 CDS CBO3242 NC_009495.1 3451738 3452496 R CoA-substrate-specific enzyme activase complement(3451738..3452496) Clostridium botulinum A str. ATCC 3502 5187152 YP_001255733.1 CDS CBO3243 NC_009495.1 3452519 3452770 R hypothetical protein complement(3452519..3452770) Clostridium botulinum A str. ATCC 3502 5184312 YP_001255734.1 CDS CBO3244 NC_009495.1 3453076 3454335 R Also similar to CBO2197 (24.4 38d), CBO2202 (29.2 id), CBO3245 (37.9), CBO3289 (26.1 38d), CBO3629 (38.9 id); R-2-hydroxyglutaryl-CoA dehydratase subunit complement(3453076..3454335) Clostridium botulinum A str. ATCC 3502 5185500 YP_001255735.1 CDS CBO3245 NC_009495.1 3454464 3455612 R Also similar to CBO2197 (24.4 38d), CBO2202 (29.2 id), CBO3246 (37.9), CBO3289 (26.1 38d), CBO3629 (38.9 id); 2-hydroxyacyl-CoA dehydratase subunit beta complement(3454464..3455612) Clostridium botulinum A str. ATCC 3502 5187503 YP_001255736.1 CDS CBO3246 NC_009495.1 3455724 3456056 R hypothetical protein complement(3455724..3456056) Clostridium botulinum A str. ATCC 3502 5187504 YP_001255737.1 CDS CBO3247 NC_009495.1 3456093 3456851 R ABC transporter ATP-binding protein complement(3456093..3456851) Clostridium botulinum A str. ATCC 3502 5185090 YP_001255738.1 CDS CBO3250 NC_009495.1 3457618 3458154 R hypothetical protein complement(3457618..3458154) Clostridium botulinum A str. ATCC 3502 5187505 YP_001255739.1 CDS CBO3251 NC_009495.1 3458206 3458424 R hypothetical protein complement(3458206..3458424) Clostridium botulinum A str. ATCC 3502 5187502 YP_001255740.1 CDS CBO3252 NC_009495.1 3458433 3458573 R hypothetical protein complement(3458433..3458573) Clostridium botulinum A str. ATCC 3502 5186898 YP_001255741.1 CDS CBO3253 NC_009495.1 3458580 3459068 R hypothetical protein complement(3458580..3459068) Clostridium botulinum A str. ATCC 3502 5186499 YP_001255742.1 CDS CBO3254 NC_009495.1 3459174 3460274 R Appears to have an extended C-terminus compared to most homologues.; lipoprotein complement(3459174..3460274) Clostridium botulinum A str. ATCC 3502 5186500 YP_001255743.1 CDS CBO3255 NC_009495.1 3460292 3460756 R lipoprotein complement(3460292..3460756) Clostridium botulinum A str. ATCC 3502 5187416 YP_001255744.1 CDS CBO3256 NC_009495.1 3460772 3461863 R permease complement(3460772..3461863) Clostridium botulinum A str. ATCC 3502 5186800 YP_001255745.1 CDS CBO3257 NC_009495.1 3461863 3462123 R hypothetical protein complement(3461863..3462123) Clostridium botulinum A str. ATCC 3502 5187211 YP_001255746.1 CDS CBO3260 NC_009495.1 3464681 3465031 R phosphodiesterase complement(3464681..3465031) Clostridium botulinum A str. ATCC 3502 5187345 YP_001255747.1 CDS CBO3261 NC_009495.1 3465168 3465767 R HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase complement(3465168..3465767) Clostridium botulinum A str. ATCC 3502 5185731 YP_001255748.1 CDS CBO3262 NC_009495.1 3465871 3467244 D hypothetical protein 3465871..3467244 Clostridium botulinum A str. ATCC 3502 5187135 YP_001255749.1 CDS CBO3263 NC_009495.1 3467357 3467512 D hypothetical protein 3467357..3467512 Clostridium botulinum A str. ATCC 3502 5184993 YP_001255750.1 CDS CBO3264 NC_009495.1 3467515 3469077 R extracellular solute-binding protein, family 5 complement(3467515..3469077) Clostridium botulinum A str. ATCC 3502 5185399 YP_001255751.1 CDS gatB NC_009495.1 3469231 3470661 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(3469231..3470661) Clostridium botulinum A str. ATCC 3502 5187519 YP_001255752.1 CDS gatA NC_009495.1 3470697 3472154 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(3470697..3472154) Clostridium botulinum A str. ATCC 3502 5187520 YP_001255753.1 CDS gatC NC_009495.1 3472191 3472478 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C complement(3472191..3472478) Clostridium botulinum A str. ATCC 3502 5187522 YP_001255754.1 CDS CBO3268 NC_009495.1 3472613 3473824 R integral membrane transport protein complement(3472613..3473824) Clostridium botulinum A str. ATCC 3502 5187082 YP_001255755.1 CDS CBO3269 NC_009495.1 3474121 3474390 R hypothetical protein complement(3474121..3474390) Clostridium botulinum A str. ATCC 3502 5187526 YP_001255756.1 CDS ligA NC_009495.1 3474491 3476485 R this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA complement(3474491..3476485) Clostridium botulinum A str. ATCC 3502 5187299 YP_001255757.1 CDS pcrA NC_009495.1 3476497 3478713 R ATP-dependent DNA helicase PcrA complement(3476497..3478713) Clostridium botulinum A str. ATCC 3502 5187530 YP_001255758.1 CDS CBO3272 NC_009495.1 3478840 3479139 R TrpR family protein complement(3478840..3479139) Clostridium botulinum A str. ATCC 3502 5184944 YP_001255759.1 CDS rluB NC_009495.1 3479437 3480153 R RNA pseudouridine synthase complement(3479437..3480153) Clostridium botulinum A str. ATCC 3502 5187549 YP_001255760.1 CDS CBO3274 NC_009495.1 3480237 3480908 R Slt family transglycosylase complement(3480237..3480908) Clostridium botulinum A str. ATCC 3502 5185388 YP_001255761.1 CDS CBO3275 NC_009495.1 3480967 3482970 R triple tyrosine motif-containing protein complement(3480967..3482970) Clostridium botulinum A str. ATCC 3502 5186574 YP_001255762.1 CDS CBO3276 NC_009495.1 3483104 3483271 D hypothetical protein 3483104..3483271 Clostridium botulinum A str. ATCC 3502 5187845 YP_001255763.1 CDS CBO3277 NC_009495.1 3483435 3483869 R hypothetical protein complement(3483435..3483869) Clostridium botulinum A str. ATCC 3502 5187534 YP_001255764.1 CDS pgi NC_009495.1 3483880 3485232 R functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase complement(3483880..3485232) Clostridium botulinum A str. ATCC 3502 5187535 YP_001255765.1 CDS CBO3279 NC_009495.1 3485316 3485486 R Highly similar to CBO2803 (89.0 38d) and CBO1301 (89.2 38d); hypothetical protein complement(3485316..3485486) Clostridium botulinum A str. ATCC 3502 5186575 YP_001255766.1 CDS CBO3280 NC_009495.1 3485795 3486439 R TetR family transcriptional regulator complement(3485795..3486439) Clostridium botulinum A str. ATCC 3502 5184676 YP_001255767.1 CDS ldhA1 NC_009495.1 3487747 3488751 D Downstream convergently transcribed paralogue; D-lactate dehydrogenase 3487747..3488751 Clostridium botulinum A str. ATCC 3502 5185406 YP_001255768.1 CDS fldH NC_009495.1 3488938 3489933 R Downstream convergently transcribed paralogue; D-lactate dehydrogenase complement(3488938..3489933) Clostridium botulinum A str. ATCC 3502 5187041 YP_001255769.1 CDS CBO3285 NC_009495.1 3490747 3491925 R hypothetical protein complement(3490747..3491925) Clostridium botulinum A str. ATCC 3502 5187542 YP_001255770.1 CDS etfA2 NC_009495.1 3492143 3493339 R N-terminal extension relative to homologues; electron transfer flavoprotein subunit alpha complement(3492143..3493339) Clostridium botulinum A str. ATCC 3502 5185225 YP_001255771.1 CDS etfB2 NC_009495.1 3493357 3494151 R electron transfer flavoprotein subunit beta complement(3493357..3494151) Clostridium botulinum A str. ATCC 3502 5184370 YP_001255772.1 CDS acdA NC_009495.1 3494164 3495297 R acyl-CoA dehydrogenase complement(3494164..3495297) Clostridium botulinum A str. ATCC 3502 5186913 YP_001255773.1 CDS fldC NC_009495.1 3495464 3496588 R R-phenyllactate dehydratase small subunit complement(3495464..3496588) Clostridium botulinum A str. ATCC 3502 5186836 YP_001255774.1 CDS fldB NC_009495.1 3496590 3497813 R R-phenyllactate dehydratase medium subunit complement(3496590..3497813) Clostridium botulinum A str. ATCC 3502 5187676 YP_001255775.1 CDS fldI NC_009495.1 3497818 3498612 R R-phenyllactate dehydratase activator complement(3497818..3498612) Clostridium botulinum A str. ATCC 3502 5186972 YP_001255776.1 CDS fldA NC_009495.1 3498612 3499850 R E-cinnamoyl-CoA:R-phenyllactate CoA transferase large subunit complement(3498612..3499850) Clostridium botulinum A str. ATCC 3502 5187855 YP_001255777.1 CDS fldL NC_009495.1 3499904 3501535 R AMP-binding protein complement(3499904..3501535) Clostridium botulinum A str. ATCC 3502 5187548 YP_001255778.1 CDS CBO3294 NC_009495.1 3502001 3503323 R branched chain amino acid ABC transporter carrier protein complement(3502001..3503323) Clostridium botulinum A str. ATCC 3502 5187567 YP_001255779.1 CDS guaA NC_009495.1 3503782 3505314 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(3503782..3505314) Clostridium botulinum A str. ATCC 3502 5187511 YP_001255780.1 CDS guaB NC_009495.1 3505327 3506781 R catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase complement(3505327..3506781) Clostridium botulinum A str. ATCC 3502 5187551 YP_001255781.1 CDS CBO3297 NC_009495.1 3507221 3507970 D PP-loop family protein 3507221..3507970 Clostridium botulinum A str. ATCC 3502 5184765 YP_001255782.1 CDS groEL NC_009495.1 3508049 3509674 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL complement(3508049..3509674) Clostridium botulinum A str. ATCC 3502 5185850 YP_001255783.1 CDS groES NC_009495.1 3509704 3509991 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(3509704..3509991) Clostridium botulinum A str. ATCC 3502 5187556 YP_001255784.1 CDS CBO3300 NC_009495.1 3510307 3510951 D hypothetical protein 3510307..3510951 Clostridium botulinum A str. ATCC 3502 5204344 YP_001255785.1 CDS CBO3301 NC_009495.1 3510946 3511680 R hypothetical protein complement(3510946..3511680) Clostridium botulinum A str. ATCC 3502 5185385 YP_001255786.1 CDS CBO3302 NC_009495.1 3512133 3513629 R [Fe] hydrogenase complement(3512133..3513629) Clostridium botulinum A str. ATCC 3502 5186569 YP_001255787.1 CDS CBO3303 NC_009495.1 3513799 3514716 R 8-oxoguanine DNA glycosylase complement(3513799..3514716) Clostridium botulinum A str. ATCC 3502 5184661 YP_001255788.1 CDS CBO3304 NC_009495.1 3514866 3516251 R function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase complement(3514866..3516251) Clostridium botulinum A str. ATCC 3502 5187352 YP_001255789.1 CDS pyrK2 NC_009495.1 3516251 3517141 R Self match: 67.698 38dentity (67.9310ngapped) in 291 aa overlap with CBO1644; ferredoxin-NADP reductase complement(3516251..3517141) Clostridium botulinum A str. ATCC 3502 5186476 YP_001255790.1 CDS CBO3306 NC_009495.1 3517372 3518004 R modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex complement(3517372..3518004) Clostridium botulinum A str. ATCC 3502 5185124 YP_001255791.1 CDS CBO3307 NC_009495.1 3518204 3520126 D drug resistance ABC transporter ATP-binding protein 3518204..3520126 Clostridium botulinum A str. ATCC 3502 5187565 YP_001255792.1 CDS CBO3308 NC_009495.1 3520467 3521231 R DNA-binding response regulator, LytTr family complement(3520467..3521231) Clostridium botulinum A str. ATCC 3502 5187563 YP_001255793.1 CDS CBO3309 NC_009495.1 3521232 3522866 R sensor histidine kinase complement(3521232..3522866) Clostridium botulinum A str. ATCC 3502 5187271 YP_001255794.1 CDS CBO3310 NC_009495.1 3523109 3524527 D Family includes Escherichia coli carbon starvation protein SWALL:CSTA_ECOLI (SWALL:P15078); carbon starvation protein CstA 3523109..3524527 Clostridium botulinum A str. ATCC 3502 5185169 YP_001255795.1 CDS CBO3311 NC_009495.1 3524578 3527505 R peptidase complement(3524578..3527505) Clostridium botulinum A str. ATCC 3502 5186419 YP_001255796.1 CDS CBO3312 NC_009495.1 3527886 3531320 R biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase complement(3527886..3531320) Clostridium botulinum A str. ATCC 3502 5184992 YP_001255797.1 CDS CBO3313 NC_009495.1 3531780 3532802 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease complement(3531780..3532802) Clostridium botulinum A str. ATCC 3502 5184329 YP_001255798.1 CDS CBO3314 NC_009495.1 3533026 3533649 D endodeoxyribonuclease RusA 3533026..3533649 Clostridium botulinum A str. ATCC 3502 5187571 YP_001255799.1 CDS CBO3315 NC_009495.1 3534026 3535282 R pyridine nucleotide-disulfide oxidoreductase complement(3534026..3535282) Clostridium botulinum A str. ATCC 3502 5186457 YP_001255800.1 CDS CBO3316 NC_009495.1 3535650 3536036 R hypothetical protein complement(3535650..3536036) Clostridium botulinum A str. ATCC 3502 5187569 YP_001255801.1 CDS CBO3317 NC_009495.1 3536099 3536989 R hypothetical protein complement(3536099..3536989) Clostridium botulinum A str. ATCC 3502 5185025 YP_001255802.1 CDS CBO3318 NC_009495.1 3537005 3537913 R manganese/zinc/iron chelate uptake ABC transporter Mzt family, substrate-binding protein complement(3537005..3537913) Clostridium botulinum A str. ATCC 3502 5187626 YP_001255803.1 CDS CBO3319 NC_009495.1 3538111 3539352 D Contains 2 domain matches to Pfam domain PF01966 which usually only occurs in single copies.; HDIG domain protein 3538111..3539352 Clostridium botulinum A str. ATCC 3502 5187576 YP_001255804.1 CDS CBO3320 NC_009495.1 3539490 3539948 D hypothetical protein 3539490..3539948 Clostridium botulinum A str. ATCC 3502 5187578 YP_001255805.1 CDS CBO3321 NC_009495.1 3539945 3540658 D glycoprotease 3539945..3540658 Clostridium botulinum A str. ATCC 3502 5187580 YP_001255806.1 CDS CBO3322 NC_009495.1 3540651 3541109 D ribosomal-protein-alanine acetyltransferase 3540651..3541109 Clostridium botulinum A str. ATCC 3502 5187196 YP_001255807.1 CDS tyrS NC_009495.1 3541467 3542690 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(3541467..3542690) Clostridium botulinum A str. ATCC 3502 5187577 YP_001255808.1 CDS CBO3324 NC_009495.1 3542923 3543330 R hypothetical protein complement(3542923..3543330) Clostridium botulinum A str. ATCC 3502 5204362 YP_001255809.1 CDS CBO3325 NC_009495.1 3543466 3544623 R ATP-binding protein complement(3543466..3544623) Clostridium botulinum A str. ATCC 3502 5187582 YP_001255810.1 CDS CBO3326 NC_009495.1 3544771 3545316 R hypothetical protein complement(3544771..3545316) Clostridium botulinum A str. ATCC 3502 5187579 YP_001255811.1 CDS CBO3327 NC_009495.1 3545417 3545578 R hypothetical protein complement(3545417..3545578) Clostridium botulinum A str. ATCC 3502 5187847 YP_001255812.1 CDS CBO3328 NC_009495.1 3545841 3546833 D PAP2 family protein 3545841..3546833 Clostridium botulinum A str. ATCC 3502 5188012 YP_001255813.1 CDS miaD NC_009495.1 3546922 3548511 R peptide chain release factor 3 complement(3546922..3548511) Clostridium botulinum A str. ATCC 3502 5187739 YP_001255814.1 CDS CBO3330 NC_009495.1 3549016 3549822 D HAD hydrolase 3549016..3549822 Clostridium botulinum A str. ATCC 3502 5186570 YP_001255815.1 CDS trpS NC_009495.1 3549941 3550939 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(3549941..3550939) Clostridium botulinum A str. ATCC 3502 5185436 YP_001255816.1 CDS CBO3333 NC_009495.1 3551552 3551926 R desulfoferrodoxin complement(3551552..3551926) Clostridium botulinum A str. ATCC 3502 5187590 YP_001255817.1 CDS CBO3334 NC_009495.1 3552109 3552303 D hypothetical protein 3552109..3552303 Clostridium botulinum A str. ATCC 3502 5187591 YP_001255818.1 CDS CBO3335 NC_009495.1 3552516 3561164 R cyclic beta 1-2 glucan synthetase complement(3552516..3561164) Clostridium botulinum A str. ATCC 3502 5187592 YP_001255819.1 CDS lysA NC_009495.1 3561429 3562715 R diaminopimelate decarboxylase complement(3561429..3562715) Clostridium botulinum A str. ATCC 3502 5186676 YP_001255820.1 CDS lysC NC_009495.1 3562731 3563933 R aspartokinase complement(3562731..3563933) Clostridium botulinum A str. ATCC 3502 5187482 YP_001255821.1 CDS CBO3338 NC_009495.1 3564329 3565627 R catalyzes the removal of amino acids from the N termini of peptides; aminopeptidase complement(3564329..3565627) Clostridium botulinum A str. ATCC 3502 5187593 YP_001255822.1 CDS CBO3339 NC_009495.1 3565776 3566954 D cation efflux family protein 3565776..3566954 Clostridium botulinum A str. ATCC 3502 5185123 YP_001255823.1 CDS CBO3340 NC_009495.1 3567091 3568182 D hypothetical protein 3567091..3568182 Clostridium botulinum A str. ATCC 3502 5187463 YP_001255824.1 CDS CBO3341 NC_009495.1 3568447 3570576 R helicase complement(3568447..3570576) Clostridium botulinum A str. ATCC 3502 5187477 YP_001255825.1 CDS ftsH NC_009495.1 3570597 3572573 R ATP-dependent metalloprotease FtsH complement(3570597..3572573) Clostridium botulinum A str. ATCC 3502 5187599 YP_001255826.1 CDS CBO3343 NC_009495.1 3573000 3574391 R divalent metal ion-dependent extracellular dipeptidase; able to hydrolyze a broad range of dipeptides but no tri-, tetra-, or larger oligopeptides; differences in the amino acid specificity of the cleavage site varies between species; similar to succinyl-diaminopimelate desuccinylases; dipeptidase PepV complement(3573000..3574391) Clostridium botulinum A str. ATCC 3502 5187600 YP_001255827.1 CDS proS1 NC_009495.1 3574592 3576028 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(3574592..3576028) Clostridium botulinum A str. ATCC 3502 5184574 YP_001255828.1 CDS CBO3345 NC_009495.1 3576455 3576718 R GIY-YIG domain-containing protein complement(3576455..3576718) Clostridium botulinum A str. ATCC 3502 5185154 YP_001255829.1 CDS CBO3348 NC_009495.1 3577282 3578940 R sulfate permease complement(3577282..3578940) Clostridium botulinum A str. ATCC 3502 5187435 YP_001255830.1 CDS CBO3349 NC_009495.1 3579154 3580539 R sensor histidine kinase complement(3579154..3580539) Clostridium botulinum A str. ATCC 3502 5187475 YP_001255831.1 CDS CBO3349A NC_009495.1 3580523 3581215 R DNA-binding response regulator complement(3580523..3581215) Clostridium botulinum A str. ATCC 3502 5204333 YP_001255832.1 CDS CBO3350 NC_009495.1 3581480 3582688 R lipoprotein complement(3581480..3582688) Clostridium botulinum A str. ATCC 3502 5186640 YP_001255833.1 CDS CBO3351 NC_009495.1 3582693 3583598 R bacitracin ABC transporter ATP-binding protein complement(3582693..3583598) Clostridium botulinum A str. ATCC 3502 5187334 YP_001255834.1 CDS CBO3352 NC_009495.1 3583955 3584158 D hypothetical protein 3583955..3584158 Clostridium botulinum A str. ATCC 3502 5185690 YP_001255835.1 CDS CBO3353 NC_009495.1 3584285 3585280 R hypothetical protein complement(3584285..3585280) Clostridium botulinum A str. ATCC 3502 5185875 YP_001255836.1 CDS CBO3354 NC_009495.1 3585647 3586732 R hypothetical protein complement(3585647..3586732) Clostridium botulinum A str. ATCC 3502 5187609 YP_001255837.1 CDS CBO3355 NC_009495.1 3587039 3587932 R BadF/BadG/BcrA/BcrD ATPase complement(3587039..3587932) Clostridium botulinum A str. ATCC 3502 5187103 YP_001255838.1 CDS celC NC_009495.1 3587992 3588288 R PTS system lactose/cellobiose-specific transporter subunit IIA complement(3587992..3588288) Clostridium botulinum A str. ATCC 3502 5187883 YP_001255839.1 CDS celA NC_009495.1 3588530 3588838 R PTS system, lactose/cellobiose-specific family, IIB component complement(3588530..3588838) Clostridium botulinum A str. ATCC 3502 5187713 YP_001255840.1 CDS CBO3358 NC_009495.1 3588958 3591687 R sigma-54 dependent transcriptional regulator complement(3588958..3591687) Clostridium botulinum A str. ATCC 3502 5187616 YP_001255841.1 CDS celB NC_009495.1 3591812 3593104 R PTS system, lactose/cellobiose family, IIC component complement(3591812..3593104) Clostridium botulinum A str. ATCC 3502 5184665 YP_001255842.1 CDS celF NC_009495.1 3593186 3594523 R glycosyl hydrolase family protein complement(3593186..3594523) Clostridium botulinum A str. ATCC 3502 5185802 YP_001255843.1 CDS CBO3361 NC_009495.1 3594879 3596192 R diguanylate cyclase complement(3594879..3596192) Clostridium botulinum A str. ATCC 3502 5184582 YP_001255844.1 CDS CBO3362 NC_009495.1 3596432 3597031 D site-specific recombinase, phage integrase 3596432..3597031 Clostridium botulinum A str. ATCC 3502 5187677 YP_001255845.1 CDS speD NC_009495.1 3597342 3597692 R S-adenosylmethionine decarboxylase complement(3597342..3597692) Clostridium botulinum A str. ATCC 3502 5187010 YP_001255846.1 CDS CBO3364 NC_009495.1 3597846 3599042 R hypothetical protein complement(3597846..3599042) Clostridium botulinum A str. ATCC 3502 5186656 YP_001255847.1 CDS CBO3365 NC_009495.1 3599233 3599421 R hypothetical protein complement(3599233..3599421) Clostridium botulinum A str. ATCC 3502 5186767 YP_001255848.1 CDS CBO3366 NC_009495.1 3599564 3599839 R hypothetical protein complement(3599564..3599839) Clostridium botulinum A str. ATCC 3502 5187326 YP_001255849.1 CDS CBO3367 NC_009495.1 3600335 3601189 R hypothetical protein complement(3600335..3601189) Clostridium botulinum A str. ATCC 3502 5187624 YP_001255850.1 CDS CBO3368 NC_009495.1 3601601 3601768 R hypothetical protein complement(3601601..3601768) Clostridium botulinum A str. ATCC 3502 5186667 YP_001255851.1 CDS CBO3369 NC_009495.1 3602179 3603564 R 23S rRNA (uracil-5-)-methyltransferase RumA complement(3602179..3603564) Clostridium botulinum A str. ATCC 3502 5186234 YP_001255852.1 CDS CBO3370 NC_009495.1 3603797 3604150 R hypothetical protein complement(3603797..3604150) Clostridium botulinum A str. ATCC 3502 5184405 YP_001255853.1 CDS CBO3371 NC_009495.1 3604477 3605487 R oxidoreductase, aldo/keto reductase complement(3604477..3605487) Clostridium botulinum A str. ATCC 3502 5187007 YP_001255854.1 CDS pyk NC_009495.1 3605631 3607388 R pyruvate kinase complement(3605631..3607388) Clostridium botulinum A str. ATCC 3502 5187143 YP_001255855.1 CDS pfkA NC_009495.1 3607422 3608381 R catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase complement(3607422..3608381) Clostridium botulinum A str. ATCC 3502 5184682 YP_001255856.1 CDS dnaE NC_009495.1 3608623 3612180 R catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria.; DNA polymerase III DnaE complement(3608623..3612180) Clostridium botulinum A str. ATCC 3502 5185108 YP_001255857.1 CDS CBO3375 NC_009495.1 3612343 3613290 R hypothetical protein complement(3612343..3613290) Clostridium botulinum A str. ATCC 3502 5187629 YP_001255858.1 CDS CBO3376 NC_009495.1 3613297 3614634 R hypothetical protein complement(3613297..3614634) Clostridium botulinum A str. ATCC 3502 5185107 YP_001255859.1 CDS CBO3377 NC_009495.1 3614631 3615515 R hypothetical protein complement(3614631..3615515) Clostridium botulinum A str. ATCC 3502 5187631 YP_001255860.1 CDS murB NC_009495.1 3615635 3616555 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(3615635..3616555) Clostridium botulinum A str. ATCC 3502 5187158 YP_001255861.1 CDS CBO3379 NC_009495.1 3616624 3617355 R hydrolase complement(3616624..3617355) Clostridium botulinum A str. ATCC 3502 5186912 YP_001255862.1 CDS uvrC NC_009495.1 3617404 3619260 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(3617404..3619260) Clostridium botulinum A str. ATCC 3502 5186190 YP_001255863.1 CDS CBO3381 NC_009495.1 3619274 3619882 R metal-dependent hydrolase complement(3619274..3619882) Clostridium botulinum A str. ATCC 3502 5186199 YP_001255864.1 CDS CBO3382 NC_009495.1 3620069 3620965 R HD domain-containing protein complement(3620069..3620965) Clostridium botulinum A str. ATCC 3502 5187643 YP_001255865.1 CDS CBO3383 NC_009495.1 3620993 3622423 R penicillin-binding protein complement(3620993..3622423) Clostridium botulinum A str. ATCC 3502 5186204 YP_001255866.1 CDS CBO3384 NC_009495.1 3622428 3623657 R FtsW/RodA/SpoVE family cell cycle protein complement(3622428..3623657) Clostridium botulinum A str. ATCC 3502 5186189 YP_001255867.1 CDS CBO3385 NC_009495.1 3623668 3624105 R FHA domain-containing protein complement(3623668..3624105) Clostridium botulinum A str. ATCC 3502 5187646 YP_001255868.1 CDS uvrA NC_009495.1 3624204 3627026 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(3624204..3627026) Clostridium botulinum A str. ATCC 3502 5186191 YP_001255869.1 CDS uvrB NC_009495.1 3627045 3629042 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(3627045..3629042) Clostridium botulinum A str. ATCC 3502 5186200 YP_001255870.1 CDS CBO3389 NC_009495.1 3630418 3631623 R carboxyl-terminal protease complement(3630418..3631623) Clostridium botulinum A str. ATCC 3502 5187639 YP_001255871.1 CDS ftsS NC_009495.1 3631833 3632723 R cell division protein FtsX complement(3631833..3632723) Clostridium botulinum A str. ATCC 3502 5187647 YP_001255872.1 CDS ftsE NC_009495.1 3632713 3633399 R cell division ATP-binding protein FtsE complement(3632713..3633399) Clostridium botulinum A str. ATCC 3502 5187648 YP_001255873.1 CDS CBO3392 NC_009495.1 3633555 3634418 R hypothetical protein complement(3633555..3634418) Clostridium botulinum A str. ATCC 3502 5186198 YP_001255874.1 CDS CBO3393 NC_009495.1 3634550 3634900 R hypothetical protein complement(3634550..3634900) Clostridium botulinum A str. ATCC 3502 5187645 YP_001255875.1 CDS tkt' NC_009495.1 3634973 3635914 R Similar to C-terminal region of several transketolases including Homo sapiens transketolase Tkt or Tkt1 SWALL:TKT_HUMAN (SWALL:P29401) (623 aa) fasta scores: E(): 6e-37, 40.69 38d in 317 aa; transketolase, C-terminal subunit complement(3634973..3635914) Clostridium botulinum A str. ATCC 3502 5184363 YP_001255876.1 CDS tkt NC_009495.1 3635914 3636738 R Similar to the N-terminal region of several transketolase including Homo sapiens transketolase Tkt or Tkt1 SWALL:TKT_HUMAN (SWALL:P29401) (623 aa) fasta scores: E(): 3.8e-36, 42.85 38d in 273 aa; transketolase complement(3635914..3636738) Clostridium botulinum A str. ATCC 3502 5187206 YP_001255877.1 CDS pemK NC_009495.1 3637001 3637354 R PemK family protein complement(3637001..3637354) Clostridium botulinum A str. ATCC 3502 5204360 YP_001255878.1 CDS CBO3396 NC_009495.1 3637311 3637634 R hypothetical protein complement(3637311..3637634) Clostridium botulinum A str. ATCC 3502 5187016 YP_001255879.1 CDS alr NC_009495.1 3637773 3638933 R converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase complement(3637773..3638933) Clostridium botulinum A str. ATCC 3502 5186557 YP_001255880.1 CDS CBO3398 NC_009495.1 3638961 3639575 R hypothetical protein complement(3638961..3639575) Clostridium botulinum A str. ATCC 3502 5186701 YP_001255881.1 CDS CBO3399 NC_009495.1 3639775 3641277 R carbohydrate kinase complement(3639775..3641277) Clostridium botulinum A str. ATCC 3502 5186809 YP_001255882.1 CDS acpS NC_009495.1 3641274 3641654 R holo-(acyl-carrier-protein) synthase complement(3641274..3641654) Clostridium botulinum A str. ATCC 3502 5187865 YP_001255883.1 CDS CBO3401 NC_009495.1 3641769 3642131 R hypothetical protein complement(3641769..3642131) Clostridium botulinum A str. ATCC 3502 5186901 YP_001255884.1 CDS CBO3402 NC_009495.1 3642525 3643850 R Na+/H+ antiporter complement(3642525..3643850) Clostridium botulinum A str. ATCC 3502 5187896 YP_001255885.1 CDS CBO3403 NC_009495.1 3644155 3645012 R hypothetical protein complement(3644155..3645012) Clostridium botulinum A str. ATCC 3502 5184272 YP_001255886.1 CDS CBO3404 NC_009495.1 3645172 3645831 R hypothetical protein complement(3645172..3645831) Clostridium botulinum A str. ATCC 3502 5187562 YP_001255887.1 CDS ramA NC_009495.1 3646084 3646677 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(3646084..3646677) Clostridium botulinum A str. ATCC 3502 5187000 YP_001255888.1 CDS CBO3406 NC_009495.1 3647123 3648295 D sodium:dicarboxylate symporter 3647123..3648295 Clostridium botulinum A str. ATCC 3502 5186657 YP_001255889.1 CDS CBO3407 NC_009495.1 3648482 3649075 R phosphatase complement(3648482..3649075) Clostridium botulinum A str. ATCC 3502 5187088 YP_001255890.1 CDS CBO3409 NC_009495.1 3650144 3650626 D hypothetical protein 3650144..3650626 Clostridium botulinum A str. ATCC 3502 5186144 YP_001255891.1 CDS glmS NC_009495.1 3650832 3652658 R glucosamine--fructose-6-phosphate aminotransferase complement(3650832..3652658) Clostridium botulinum A str. ATCC 3502 5186871 YP_001255892.1 CDS CBO3411 NC_009495.1 3653261 3653938 R transaldolase complement(3653261..3653938) Clostridium botulinum A str. ATCC 3502 5187670 YP_001255893.1 CDS CBO3412 NC_009495.1 3653957 3654604 R haloacid dehalogenase complement(3653957..3654604) Clostridium botulinum A str. ATCC 3502 5186501 YP_001255894.1 CDS gutD NC_009495.1 3654628 3655413 R catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate; sorbitol-6-phosphate dehydrogenase complement(3654628..3655413) Clostridium botulinum A str. ATCC 3502 5187667 YP_001255895.1 CDS gutB NC_009495.1 3655433 3655798 R PTS system glucitol/sorbitol-specific transporter subunit IIA complement(3655433..3655798) Clostridium botulinum A str. ATCC 3502 5187672 YP_001255896.1 CDS gutE NC_009495.1 3656014 3657021 R PTS system glucitol/sorbitol-specific transporter subunit IIBC complement(3656014..3657021) Clostridium botulinum A str. ATCC 3502 5187870 YP_001255897.1 CDS gutA NC_009495.1 3657031 3657576 R PTS system glucitol/sorbitol-specific transporter subunit IIC complement(3657031..3657576) Clostridium botulinum A str. ATCC 3502 5187675 YP_001255898.1 CDS gutM NC_009495.1 3657619 3658014 R glucitol operon activator protein complement(3657619..3658014) Clostridium botulinum A str. ATCC 3502 5187668 YP_001255899.1 CDS CBO3418 NC_009495.1 3658028 3659077 R L-iditol 2-dehydrogenase complement(3658028..3659077) Clostridium botulinum A str. ATCC 3502 5186284 YP_001255900.1 CDS sorC NC_009495.1 3659112 3660083 R glucitol operon regulator complement(3659112..3660083) Clostridium botulinum A str. ATCC 3502 5187673 YP_001255901.1 CDS glmM NC_009495.1 3660438 3661787 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(3660438..3661787) Clostridium botulinum A str. ATCC 3502 5187856 YP_001255902.1 CDS CBO3421 NC_009495.1 3661922 3662452 R subunit of pyruvate:flavodoxin oxidoreductase complement(3661922..3662452) Clostridium botulinum A str. ATCC 3502 5186833 YP_001255903.1 CDS CBO3422 NC_009495.1 3662454 3663203 R subunit of pyruvate:flavodoxin oxidoreductase complement(3662454..3663203) Clostridium botulinum A str. ATCC 3502 5187684 YP_001255904.1 CDS CBO3423 NC_009495.1 3663203 3664273 R catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA; 2-ketoisovalerate ferredoxin reductase complement(3663203..3664273) Clostridium botulinum A str. ATCC 3502 5187682 YP_001255905.1 CDS CBO3424 NC_009495.1 3664289 3664498 R 2-oxoacid:acceptor oxidoreductase subunit delta complement(3664289..3664498) Clostridium botulinum A str. ATCC 3502 5187681 YP_001255906.1 CDS CBO3425 NC_009495.1 3664600 3665292 R hypothetical protein complement(3664600..3665292) Clostridium botulinum A str. ATCC 3502 5186740 YP_001255907.1 CDS buk1 NC_009495.1 3665525 3666595 R catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase complement(3665525..3666595) Clostridium botulinum A str. ATCC 3502 5187685 YP_001255908.1 CDS ptb2 NC_009495.1 3666624 3667535 R catalyzes the synthesis of butanoylphosphate from butanoyl-CoA and inorganic phosphate; phosphate butyryltransferase complement(3666624..3667535) Clostridium botulinum A str. ATCC 3502 5184360 YP_001255909.1 CDS buk2 NC_009495.1 3667528 3668622 R catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase complement(3667528..3668622) Clostridium botulinum A str. ATCC 3502 5187679 YP_001255910.1 CDS CBO3429 NC_009495.1 3668723 3670321 R oxidoreductase, FAD-binding complement(3668723..3670321) Clostridium botulinum A str. ATCC 3502 5187680 YP_001255911.1 CDS CBO3430 NC_009495.1 3670323 3671603 R hypothetical protein complement(3670323..3671603) Clostridium botulinum A str. ATCC 3502 5185507 YP_001255912.1 CDS CBO3431 NC_009495.1 3671573 3672421 R hypothetical protein complement(3671573..3672421) Clostridium botulinum A str. ATCC 3502 5186778 YP_001255913.1 CDS CBO3432 NC_009495.1 3672676 3673209 D Similar to the C-terminal region of Bacillus cereus spore cortex-lytic enzyme precursor sleb or bc2753 SWALL:SLEB_BACCR (SWALL:P70874) (259 aa) fasta scores: E(): 2.1e-13, 42.52 38d in 127 aa; cell wall hydrolase 3672676..3673209 Clostridium botulinum A str. ATCC 3502 5186447 YP_001255914.1 CDS trxB3 NC_009495.1 3673601 3674464 R oxidoreductase, pyridine nucleotide-disulfide family complement(3673601..3674464) Clostridium botulinum A str. ATCC 3502 5187690 YP_001255915.1 CDS trxC NC_009495.1 3674530 3674847 R thioredoxin complement(3674530..3674847) Clostridium botulinum A str. ATCC 3502 5187718 YP_001255916.1 CDS iadA NC_009495.1 3674956 3676131 R isoaspartyl dipeptidase complement(3674956..3676131) Clostridium botulinum A str. ATCC 3502 5186462 YP_001255917.1 CDS CBO3436 NC_009495.1 3676206 3677459 R hypothetical protein complement(3676206..3677459) Clostridium botulinum A str. ATCC 3502 5187869 YP_001255918.1 CDS CBO3437 NC_009495.1 3677487 3678227 R lipoprotein complement(3677487..3678227) Clostridium botulinum A str. ATCC 3502 5186884 YP_001255919.1 CDS ptsI NC_009495.1 3678330 3679949 R phosphoenolpyruvate-protein phosphotransferase complement(3678330..3679949) Clostridium botulinum A str. ATCC 3502 5187183 YP_001255920.1 CDS CBO3439 NC_009495.1 3680267 3682276 D sensory box sigma-54 dependent transcriptional regulator 3680267..3682276 Clostridium botulinum A str. ATCC 3502 5187533 YP_001255921.1 CDS CBO3440 NC_009495.1 3682413 3683120 R TPR repeat-containing protein complement(3682413..3683120) Clostridium botulinum A str. ATCC 3502 5186853 YP_001255922.1 CDS fumA' NC_009495.1 3683190 3683753 R Similar to C-terminal region of Escherichia coli fumarate hydratase class I, anaerobic FumB or b4122 SWALL:FUMB_ECOLI (SWALL:P14407) (548 aa) fasta scores: E(): 4.1e-18, 38.76 38d in 178 aa; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta region complement(3683190..3683753) Clostridium botulinum A str. ATCC 3502 5187761 YP_001255923.1 CDS fumA NC_009495.1 3683845 3684687 R Catalyzes the reversible hydration of fumaric acid to yield I-malic acid; fumarate hydratase complement(3683845..3684687) Clostridium botulinum A str. ATCC 3502 5185273 YP_001255924.1 CDS cwlD NC_009495.1 3684828 3685532 R N-acetylmuramoyl-L-alanine amidase complement(3684828..3685532) Clostridium botulinum A str. ATCC 3502 5187198 YP_001255925.1 CDS CBO3444 NC_009495.1 3685798 3687414 R Na/Pi-cotransporter family protein/PhoU family protein complement(3685798..3687414) Clostridium botulinum A str. ATCC 3502 5186148 YP_001255926.1 CDS rpsI NC_009495.1 3687720 3688112 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(3687720..3688112) Clostridium botulinum A str. ATCC 3502 5184277 YP_001255927.1 CDS rplM NC_009495.1 3688138 3688575 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(3688138..3688575) Clostridium botulinum A str. ATCC 3502 5184257 YP_001255928.1 CDS truA NC_009495.1 3688696 3689436 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(3688696..3689436) Clostridium botulinum A str. ATCC 3502 5186421 YP_001255929.1 CDS CBO3448 NC_009495.1 3689436 3690239 R cobalt ABC transporter permease complement(3689436..3690239) Clostridium botulinum A str. ATCC 3502 5186549 YP_001255930.1 CDS cbiO NC_009495.1 3690236 3691102 R with CbiNQ forms the ABC transporter for cobalt import; Clostridia have two adjacent copies of this gene; cobalt transporter ATP-binding subunit complement(3690236..3691102) Clostridium botulinum A str. ATCC 3502 5185019 YP_001255931.1 CDS CBO3450 NC_009495.1 3691087 3691944 R with CbiNQ forms the ABC transporter for cobalt import; Mycoplasmas have two adjacent copies of this gene; cobalt transporter ATP-binding subunit complement(3691087..3691944) Clostridium botulinum A str. ATCC 3502 5187226 YP_001255932.1 CDS rplQ NC_009495.1 3692026 3692367 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(3692026..3692367) Clostridium botulinum A str. ATCC 3502 5187110 YP_001255933.1 CDS rpoA NC_009495.1 3692411 3693358 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(3692411..3693358) Clostridium botulinum A str. ATCC 3502 5184756 YP_001255934.1 CDS rpsD NC_009495.1 3693426 3694046 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(3693426..3694046) Clostridium botulinum A str. ATCC 3502 5187129 YP_001255935.1 CDS rpsK NC_009495.1 3694081 3694479 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(3694081..3694479) Clostridium botulinum A str. ATCC 3502 5184361 YP_001255936.1 CDS rpsM NC_009495.1 3694497 3694868 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(3694497..3694868) Clostridium botulinum A str. ATCC 3502 5187714 YP_001255937.1 CDS rpmJ NC_009495.1 3694981 3695094 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 complement(3694981..3695094) Clostridium botulinum A str. ATCC 3502 5187711 YP_001255938.1 CDS infA NC_009495.1 3695111 3695329 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(3695111..3695329) Clostridium botulinum A str. ATCC 3502 5187712 YP_001255939.1 CDS CBO3458 NC_009495.1 3695337 3695627 R Similar to archaeal and eukaryotic ribosomal protein L14e; hypothetical protein complement(3695337..3695627) Clostridium botulinum A str. ATCC 3502 5186498 YP_001255940.1 CDS map1 NC_009495.1 3695633 3696382 R methionine aminopeptidase complement(3695633..3696382) Clostridium botulinum A str. ATCC 3502 5185657 YP_001255941.1 CDS adk NC_009495.1 3696382 3697032 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(3696382..3697032) Clostridium botulinum A str. ATCC 3502 5186763 YP_001255942.1 CDS secY NC_009495.1 3697056 3698333 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(3697056..3698333) Clostridium botulinum A str. ATCC 3502 5185373 YP_001255943.1 CDS rplO NC_009495.1 3698334 3698774 R late assembly protein; 50S ribosomal protein L15 complement(3698334..3698774) Clostridium botulinum A str. ATCC 3502 5187483 YP_001255944.1 CDS rpmD NC_009495.1 3698794 3698973 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(3698794..3698973) Clostridium botulinum A str. ATCC 3502 5186566 YP_001255945.1 CDS rpsE NC_009495.1 3698987 3699484 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(3698987..3699484) Clostridium botulinum A str. ATCC 3502 5185823 YP_001255946.1 CDS rplR NC_009495.1 3699502 3699861 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(3699502..3699861) Clostridium botulinum A str. ATCC 3502 5187725 YP_001255947.1 CDS rplF NC_009495.1 3699880 3700422 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(3699880..3700422) Clostridium botulinum A str. ATCC 3502 5187721 YP_001255948.1 CDS rpsH NC_009495.1 3700446 3700844 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(3700446..3700844) Clostridium botulinum A str. ATCC 3502 5184529 YP_001255949.1 CDS rpsN NC_009495.1 3700874 3701059 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 complement(3700874..3701059) Clostridium botulinum A str. ATCC 3502 5187723 YP_001255950.1 CDS rplE NC_009495.1 3701076 3701618 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(3701076..3701618) Clostridium botulinum A str. ATCC 3502 5187726 YP_001255951.1 CDS rplX NC_009495.1 3701641 3701958 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(3701641..3701958) Clostridium botulinum A str. ATCC 3502 5187724 YP_001255952.1 CDS rplN NC_009495.1 3701982 3702350 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(3701982..3702350) Clostridium botulinum A str. ATCC 3502 5184556 YP_001255953.1 CDS rpsQ NC_009495.1 3702385 3702639 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(3702385..3702639) Clostridium botulinum A str. ATCC 3502 5186963 YP_001255954.1 CDS rpmC NC_009495.1 3702661 3702873 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(3702661..3702873) Clostridium botulinum A str. ATCC 3502 5187780 YP_001255955.1 CDS rplP NC_009495.1 3702863 3703306 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(3702863..3703306) Clostridium botulinum A str. ATCC 3502 5187808 YP_001255956.1 CDS rpsC NC_009495.1 3703324 3703995 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(3703324..3703995) Clostridium botulinum A str. ATCC 3502 5184367 YP_001255957.1 CDS rplV NC_009495.1 3704013 3704348 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(3704013..3704348) Clostridium botulinum A str. ATCC 3502 5187738 YP_001255958.1 CDS rpsS NC_009495.1 3704370 3704654 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(3704370..3704654) Clostridium botulinum A str. ATCC 3502 5187782 YP_001255959.1 CDS rplB NC_009495.1 3704724 3705557 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(3704724..3705557) Clostridium botulinum A str. ATCC 3502 5187734 YP_001255960.1 CDS rplW NC_009495.1 3705612 3705905 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(3705612..3705905) Clostridium botulinum A str. ATCC 3502 5187751 YP_001255961.1 CDS rplD NC_009495.1 3705905 3706525 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(3705905..3706525) Clostridium botulinum A str. ATCC 3502 5187777 YP_001255962.1 CDS rplC NC_009495.1 3706550 3707179 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(3706550..3707179) Clostridium botulinum A str. ATCC 3502 5187746 YP_001255963.1 CDS rpsJ NC_009495.1 3707269 3707577 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(3707269..3707577) Clostridium botulinum A str. ATCC 3502 5187478 YP_001255964.1 CDS tufA NC_009495.1 3707974 3709167 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(3707974..3709167) Clostridium botulinum A str. ATCC 3502 5187740 YP_001255965.1 CDS fusA NC_009495.1 3709207 3711276 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(3709207..3711276) Clostridium botulinum A str. ATCC 3502 5187731 YP_001255966.1 CDS rpsG NC_009495.1 3711342 3711812 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(3711342..3711812) Clostridium botulinum A str. ATCC 3502 5187762 YP_001255967.1 CDS rpsL NC_009495.1 3711973 3712350 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(3711973..3712350) Clostridium botulinum A str. ATCC 3502 5187772 YP_001255968.1 CDS CBO3486 NC_009495.1 3712426 3712665 R ribosomal protein L7Ae family protein complement(3712426..3712665) Clostridium botulinum A str. ATCC 3502 5187752 YP_001255969.1 CDS rpoC NC_009495.1 3712790 3716326 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' complement(3712790..3716326) Clostridium botulinum A str. ATCC 3502 5187652 YP_001255970.1 CDS rpoB NC_009495.1 3716347 3720045 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(3716347..3720045) Clostridium botulinum A str. ATCC 3502 5187754 YP_001255971.1 CDS rplL NC_009495.1 3720310 3720681 R present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 complement(3720310..3720681) Clostridium botulinum A str. ATCC 3502 5186877 YP_001255972.1 CDS rplJ NC_009495.1 3720728 3721228 R binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 complement(3720728..3721228) Clostridium botulinum A str. ATCC 3502 5187768 YP_001255973.1 CDS rplA NC_009495.1 3721430 3722119 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(3721430..3722119) Clostridium botulinum A str. ATCC 3502 5186180 YP_001255974.1 CDS rplK NC_009495.1 3722176 3722601 R binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 complement(3722176..3722601) Clostridium botulinum A str. ATCC 3502 5186670 YP_001255975.1 CDS nusG NC_009495.1 3722672 3723196 R Modulates Rho-dependent transcription termination; transcription antitermination protein NusG complement(3722672..3723196) Clostridium botulinum A str. ATCC 3502 5186571 YP_001255976.1 CDS secE NC_009495.1 3723243 3723470 R forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE complement(3723243..3723470) Clostridium botulinum A str. ATCC 3502 5187767 YP_001255977.1 CDS rpmG NC_009495.1 3723520 3723669 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 complement(3723520..3723669) Clostridium botulinum A str. ATCC 3502 5187732 YP_001255978.1 CDS tufB NC_009495.1 3723871 3725064 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(3723871..3725064) Clostridium botulinum A str. ATCC 3502 5187735 YP_001255979.1 CDS sigH NC_009495.1 3725380 3725952 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 complement(3725380..3725952) Clostridium botulinum A str. ATCC 3502 5187586 YP_001255980.1 CDS CBO3498 NC_009495.1 3726095 3726604 R hypothetical protein complement(3726095..3726604) Clostridium botulinum A str. ATCC 3502 5204354 YP_001255981.1 CDS yacO NC_009495.1 3726607 3727380 R TrmH family RNA methyltransferase complement(3726607..3727380) Clostridium botulinum A str. ATCC 3502 5187743 YP_001255982.1 CDS thyX NC_009495.1 3727383 3728141 R flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase complement(3727383..3728141) Clostridium botulinum A str. ATCC 3502 5187710 YP_001255983.1 CDS CBO3500A NC_009495.1 3728125 3728565 R RNase3 domain-containing protein complement(3728125..3728565) Clostridium botulinum A str. ATCC 3502 5204359 YP_001255984.1 CDS cysS NC_009495.1 3728614 3730011 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(3728614..3730011) Clostridium botulinum A str. ATCC 3502 5187627 YP_001255985.1 CDS tdcB NC_009495.1 3730040 3731263 R threonine dehydratase complement(3730040..3731263) Clostridium botulinum A str. ATCC 3502 5187806 YP_001255986.1 CDS proS2 NC_009495.1 3731329 3732966 R prolyl-tRNA synthetase complement(3731329..3732966) Clostridium botulinum A str. ATCC 3502 5187728 YP_001255987.1 CDS ispD NC_009495.1 3733077 3733766 R 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(3733077..3733766) Clostridium botulinum A str. ATCC 3502 5187748 YP_001255988.1 CDS CBO3505 NC_009495.1 3733768 3734868 R PIN/TRAM domain protein complement(3733768..3734868) Clostridium botulinum A str. ATCC 3502 5187776 YP_001255989.1 CDS CBO3506 NC_009495.1 3735273 3735671 D hypothetical protein 3735273..3735671 Clostridium botulinum A str. ATCC 3502 5187745 YP_001255990.1 CDS CBO3507 NC_009495.1 3735703 3736764 R non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair; DNA integrity scanning protein DisA complement(3735703..3736764) Clostridium botulinum A str. ATCC 3502 5187763 YP_001255991.1 CDS radA NC_009495.1 3736783 3738141 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(3736783..3738141) Clostridium botulinum A str. ATCC 3502 5186879 YP_001255992.1 CDS clpC NC_009495.1 3738261 3740696 R negative regulator of genetic competence MecB/ClpC complement(3738261..3740696) Clostridium botulinum A str. ATCC 3502 5186546 YP_001255993.1 CDS CBO3510 NC_009495.1 3740698 3741741 R ATP:guanido phosphotransferase complement(3740698..3741741) Clostridium botulinum A str. ATCC 3502 5185145 YP_001255994.1 CDS CBO3511 NC_009495.1 3741746 3742273 R UVR domain protein complement(3741746..3742273) Clostridium botulinum A str. ATCC 3502 5186173 YP_001255995.1 CDS ctsR NC_009495.1 3742296 3742760 R transciptional repressor CtsR complement(3742296..3742760) Clostridium botulinum A str. ATCC 3502 5187744 YP_001255996.1 CDS CBO3513 NC_009495.1 3743156 3743386 R hypothetical protein complement(3743156..3743386) Clostridium botulinum A str. ATCC 3502 5187755 YP_001255997.1 CDS fusB NC_009495.1 3743733 3745805 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(3743733..3745805) Clostridium botulinum A str. ATCC 3502 5187322 YP_001255998.1 CDS murD NC_009495.1 3756820 3758196 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(3756820..3758196) Clostridium botulinum A str. ATCC 3502 5187736 YP_001255999.1 CDS glyS NC_009495.1 3759022 3760413 R Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase complement(3759022..3760413) Clostridium botulinum A str. ATCC 3502 5186874 YP_001256000.1 CDS lysS NC_009495.1 3760733 3762247 R class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase complement(3760733..3762247) Clostridium botulinum A str. ATCC 3502 5187733 YP_001256001.1 CDS greA NC_009495.1 3762266 3762748 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA complement(3762266..3762748) Clostridium botulinum A str. ATCC 3502 5187697 YP_001256002.1 CDS CBO3520 NC_009495.1 3762879 3763706 R hypothetical protein complement(3762879..3763706) Clostridium botulinum A str. ATCC 3502 5187770 YP_001256003.1 CDS CBO3521 NC_009495.1 3763756 3764727 R dihydrouridine synthase complement(3763756..3764727) Clostridium botulinum A str. ATCC 3502 5187774 YP_001256004.1 CDS CBO3522 NC_009495.1 3764737 3765513 R type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase complement(3764737..3765513) Clostridium botulinum A str. ATCC 3502 5187771 YP_001256005.1 CDS fhs NC_009495.1 3765668 3767341 R catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase complement(3765668..3767341) Clostridium botulinum A str. ATCC 3502 5187153 YP_001256006.1 CDS ftsH NC_009495.1 3767544 3769349 R ATP-dependent metalloprotease FtsH complement(3767544..3769349) Clostridium botulinum A str. ATCC 3502 5186183 YP_001256007.1 CDS hpt NC_009495.1 3769431 3769976 R hypoxanthine phosphoribosyltransferase complement(3769431..3769976) Clostridium botulinum A str. ATCC 3502 5187742 YP_001256008.1 CDS CBO3526 NC_009495.1 3769960 3771366 R tRNA(Ile)-lysidine synthetase complement(3769960..3771366) Clostridium botulinum A str. ATCC 3502 5186953 YP_001256009.1 CDS CBO3527 NC_009495.1 3771515 3773902 R stage II sporulation protein E complement(3771515..3773902) Clostridium botulinum A str. ATCC 3502 5187750 YP_001256010.1 CDS CBO3529 NC_009495.1 3774621 3775025 R hypothetical protein complement(3774621..3775025) Clostridium botulinum A str. ATCC 3502 5186554 YP_001256011.1 CDS divA NC_009495.1 3775087 3775356 R cell division protein FtsL complement(3775087..3775356) Clostridium botulinum A str. ATCC 3502 5187991 YP_001256012.1 CDS CBO3531 NC_009495.1 3775451 3775858 R hypothetical protein complement(3775451..3775858) Clostridium botulinum A str. ATCC 3502 5186637 YP_001256013.1 CDS CBO3532 NC_009495.1 3775864 3776154 R sporulation protein YabP complement(3775864..3776154) Clostridium botulinum A str. ATCC 3502 5187788 YP_001256014.1 CDS CBO3533 NC_009495.1 3776274 3776513 R S4 domain-containing protein complement(3776274..3776513) Clostridium botulinum A str. ATCC 3502 5187692 YP_001256015.1 CDS hbs NC_009495.1 3776587 3776865 R DNA-binding protein HU complement(3776587..3776865) Clostridium botulinum A str. ATCC 3502 5184624 YP_001256016.1 CDS CBO3535 NC_009495.1 3776993 3778450 R Similar over its C-terminal region to Escherichia coli, and Escherichia coli O157:H7 MazG protein or b2781 or z4096 or ecs3641 SWALL:MAZG_ECOLI (SWALL:P33646) (263 aa) fasta scores: E(): 7.8e-33, 41.96 38d in 255 aa, and similar over its entire length to Clostridium tetani protein ctc00198 SWALL:Q899H9 (EMBL:AE015936) (491 aa) fasta scores: E(): 3.4e-118, 66.18 38d in 482 aa; MazG family protein complement(3776993..3778450) Clostridium botulinum A str. ATCC 3502 5187789 YP_001256017.1 CDS spoIIIF NC_009495.1 3778453 3779988 R stage V sporulation protein B complement(3778453..3779988) Clostridium botulinum A str. ATCC 3502 5187790 YP_001256018.1 CDS spoVT NC_009495.1 3780121 3780672 R stage V sporulation protein T complement(3780121..3780672) Clostridium botulinum A str. ATCC 3502 5187791 YP_001256019.1 CDS prsA NC_009495.1 3780871 3781881 R cis/trans isomerase of peptidylprolyl; PPIase; membrane-bound lipoprotein; peptidyl-prolyl isomerase complement(3780871..3781881) Clostridium botulinum A str. ATCC 3502 5187792 YP_001256020.1 CDS mfd NC_009495.1 3781965 3785471 R transcription-repair coupling factor complement(3781965..3785471) Clostridium botulinum A str. ATCC 3502 5187793 YP_001256021.1 CDS pth NC_009495.1 3785499 3786068 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(3785499..3786068) Clostridium botulinum A str. ATCC 3502 5187794 YP_001256022.1 CDS CBO3541 NC_009495.1 3786178 3787350 R protease complement(3786178..3787350) Clostridium botulinum A str. ATCC 3502 5187795 YP_001256023.1 CDS CBO3542 NC_009495.1 3787385 3788794 R sensor histidine kinase complement(3787385..3788794) Clostridium botulinum A str. ATCC 3502 5187796 YP_001256024.1 CDS CBO3543 NC_009495.1 3788795 3789481 R DNA-binding response regulator complement(3788795..3789481) Clostridium botulinum A str. ATCC 3502 5187799 YP_001256025.1 CDS prs NC_009495.1 3789661 3790620 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(3789661..3790620) Clostridium botulinum A str. ATCC 3502 5184611 YP_001256026.1 CDS glmU NC_009495.1 3790641 3792014 R forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(3790641..3792014) Clostridium botulinum A str. ATCC 3502 5185390 YP_001256027.1 CDS spoVG NC_009495.1 3792176 3792463 R stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus; regulatory protein SpoVG complement(3792176..3792463) Clostridium botulinum A str. ATCC 3502 5187802 YP_001256028.1 CDS purR NC_009495.1 3792566 3793381 R pur operon repressor complement(3792566..3793381) Clostridium botulinum A str. ATCC 3502 5185687 YP_001256029.1 CDS murC NC_009495.1 3793581 3794957 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 3793581..3794957 Clostridium botulinum A str. ATCC 3502 5187804 YP_001256030.1 CDS CBO3549 NC_009495.1 3795022 3795330 D hypothetical protein 3795022..3795330 Clostridium botulinum A str. ATCC 3502 5185187 YP_001256031.1 CDS CBO3550 NC_009495.1 3795576 3796925 D [Fe] hydrogenase 3795576..3796925 Clostridium botulinum A str. ATCC 3502 5187807 YP_001256032.1 CDS CBO3551 NC_009495.1 3797011 3797655 D haloacid dehalogenase 3797011..3797655 Clostridium botulinum A str. ATCC 3502 5187585 YP_001256033.1 CDS CBO3552 NC_009495.1 3797930 3798328 D hypothetical protein 3797930..3798328 Clostridium botulinum A str. ATCC 3502 5186626 YP_001256034.1 CDS CBO3553 NC_009495.1 3798395 3799066 R catalyzes the formation of (2R)-3-sulfolactate from (2R)-2-phospho-3-sulfolactate; 2-phosphosulfolactate phosphatase complement(3798395..3799066) Clostridium botulinum A str. ATCC 3502 5187232 YP_001256035.1 CDS CBO3554 NC_009495.1 3799159 3800091 R radical SAM family protein complement(3799159..3800091) Clostridium botulinum A str. ATCC 3502 5187952 YP_001256036.1 CDS CBO3555 NC_009495.1 3800159 3801295 R phage head-tail adaptor complement(3800159..3801295) Clostridium botulinum A str. ATCC 3502 5187256 YP_001256037.1 CDS CBO3556 NC_009495.1 3801435 3802481 D hypothetical protein 3801435..3802481 Clostridium botulinum A str. ATCC 3502 5185121 YP_001256038.1 CDS CBO3557 NC_009495.1 3802514 3803410 D radical SAM domain protein 3802514..3803410 Clostridium botulinum A str. ATCC 3502 5184265 YP_001256039.1 CDS sonO NC_009495.1 3803553 3805349 R Recently identified as a heme protein sensor of nitric oxide; Nioche et al. 2004, Science 306: 1550 - 1553; methyl-accepting chemotaxis protein complement(3803553..3805349) Clostridium botulinum A str. ATCC 3502 5184638 YP_001256040.1 CDS CBO3559 NC_009495.1 3805652 3806314 R DNA-binding protein complement(3805652..3806314) Clostridium botulinum A str. ATCC 3502 5187084 YP_001256041.1 CDS CBO3560 NC_009495.1 3806329 3806703 R hypothetical protein complement(3806329..3806703) Clostridium botulinum A str. ATCC 3502 5186335 YP_001256042.1 CDS ppiB NC_009495.1 3806721 3807239 R cyclophilin type peptidyl-prolyl cis-trans isomerase complement(3806721..3807239) Clostridium botulinum A str. ATCC 3502 5187818 YP_001256043.1 CDS dga NC_009495.1 3807386 3808159 R converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase complement(3807386..3808159) Clostridium botulinum A str. ATCC 3502 5187853 YP_001256044.1 CDS glnA NC_009495.1 3808352 3810250 D glutamine synthetase 3808352..3810250 Clostridium botulinum A str. ATCC 3502 5186243 YP_001256045.1 CDS CBO3564 NC_009495.1 3810295 3810843 R hypothetical protein complement(3810295..3810843) Clostridium botulinum A str. ATCC 3502 5187918 YP_001256046.1 CDS murA NC_009495.1 3811227 3812492 D adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3811227..3812492 Clostridium botulinum A str. ATCC 3502 5184404 YP_001256047.1 CDS CBO3567 NC_009495.1 3812518 3813303 D metallo-beta-lactamase 3812518..3813303 Clostridium botulinum A str. ATCC 3502 5186185 YP_001256048.1 CDS CBO3568 NC_009495.1 3813320 3813889 D lipoprotein 3813320..3813889 Clostridium botulinum A str. ATCC 3502 5187861 YP_001256049.1 CDS CBO3569 NC_009495.1 3813904 3814407 D Similar to the C-terminal region of several preprotein translocase SecA subunit; hypothetical protein 3813904..3814407 Clostridium botulinum A str. ATCC 3502 5187833 YP_001256050.1 CDS CBO3570 NC_009495.1 3814586 3815065 D SPOUT methyltransferase; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 3814586..3815065 Clostridium botulinum A str. ATCC 3502 5186910 YP_001256051.1 CDS CBO3572 NC_009495.1 3815884 3817110 R major facilitator transporter complement(3815884..3817110) Clostridium botulinum A str. ATCC 3502 5187175 YP_001256052.1 CDS CBO3573 NC_009495.1 3817146 3817781 R NADPH-dependent FMN reductase complement(3817146..3817781) Clostridium botulinum A str. ATCC 3502 5186825 YP_001256053.1 CDS CBO3574 NC_009495.1 3818074 3818646 D TetR family transcriptional regulator 3818074..3818646 Clostridium botulinum A str. ATCC 3502 5184411 YP_001256054.1 CDS CBO3575 NC_009495.1 3818893 3819279 D AraC family transcriptional regulator 3818893..3819279 Clostridium botulinum A str. ATCC 3502 5184309 YP_001256055.1 CDS map2 NC_009495.1 3819311 3820186 D methionine aminopeptidase 3819311..3820186 Clostridium botulinum A str. ATCC 3502 5187830 YP_001256056.1 CDS CBO3577 NC_009495.1 3820276 3820815 R nitroreductase complement(3820276..3820815) Clostridium botulinum A str. ATCC 3502 5185695 YP_001256057.1 CDS CBO3578 NC_009495.1 3821508 3823013 D hypothetical protein 3821508..3823013 Clostridium botulinum A str. ATCC 3502 5186961 YP_001256058.1 CDS CBO3579 NC_009495.1 3823003 3823842 D radical SAM domain protein 3823003..3823842 Clostridium botulinum A str. ATCC 3502 5187835 YP_001256059.1 CDS CBO3580 NC_009495.1 3824151 3824261 D hypothetical protein 3824151..3824261 Clostridium botulinum A str. ATCC 3502 5187817 YP_001256060.1 CDS CBO3581 NC_009495.1 3824258 3824509 D hypothetical protein 3824258..3824509 Clostridium botulinum A str. ATCC 3502 5187543 YP_001256061.1 CDS bioB NC_009495.1 3824512 3825558 D catalyzes the formation of biotin from dethiobiotin and sulfur; biotin synthase 3824512..3825558 Clostridium botulinum A str. ATCC 3502 5187816 YP_001256062.1 CDS thiH NC_009495.1 3825559 3826935 D in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and IscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; in Thermotoga this enzyme has an extra C-terminal domain; thiamine biosynthesis protein ThiH 3825559..3826935 Clostridium botulinum A str. ATCC 3502 5187839 YP_001256063.1 CDS CBO3584 NC_009495.1 3826944 3828143 D GTP-binding protein 3826944..3828143 Clostridium botulinum A str. ATCC 3502 5187840 YP_001256064.1 CDS CBO3585 NC_009495.1 3828458 3829831 D sodium:solute symporter family protein 3828458..3829831 Clostridium botulinum A str. ATCC 3502 5187841 YP_001256065.1 CDS CBO3586 NC_009495.1 3830131 3831375 D glycoside hydrolase family protein 3830131..3831375 Clostridium botulinum A str. ATCC 3502 5187842 YP_001256066.1 CDS CBO3587 NC_009495.1 3831537 3832214 R PHP domain-containing protein complement(3831537..3832214) Clostridium botulinum A str. ATCC 3502 5187843 YP_001256067.1 CDS CBO3588 NC_009495.1 3832510 3832995 D hypothetical protein 3832510..3832995 Clostridium botulinum A str. ATCC 3502 5187844 YP_001256068.1 CDS CBO3589 NC_009495.1 3833102 3833533 D hypothetical protein 3833102..3833533 Clostridium botulinum A str. ATCC 3502 5185700 YP_001256069.1 CDS CBO3590 NC_009495.1 3833714 3834619 D LysR family transcriptional regulator 3833714..3834619 Clostridium botulinum A str. ATCC 3502 5184371 YP_001256070.1 CDS CBO3591 NC_009495.1 3834707 3835903 D subtilase 3834707..3835903 Clostridium botulinum A str. ATCC 3502 5186897 YP_001256071.1 CDS CBO3592 NC_009495.1 3835938 3836819 R LysR family transcriptional regulator complement(3835938..3836819) Clostridium botulinum A str. ATCC 3502 5185691 YP_001256072.1 CDS CBO3593 NC_009495.1 3836848 3837795 R D-isomer specific 2-hydroxyacid dehydrogenase complement(3836848..3837795) Clostridium botulinum A str. ATCC 3502 5186558 YP_001256073.1 CDS accA NC_009495.1 3837995 3838834 R acetyl-CoA carboxylase carboxyl transferase subunit alpha complement(3837995..3838834) Clostridium botulinum A str. ATCC 3502 5186552 YP_001256074.1 CDS accD NC_009495.1 3838881 3839750 R acetyl-CoA carboxylase carboxyl transferase subunit beta complement(3838881..3839750) Clostridium botulinum A str. ATCC 3502 5186231 YP_001256075.1 CDS accC NC_009495.1 3839770 3841116 R biotin carboxylase complement(3839770..3841116) Clostridium botulinum A str. ATCC 3502 5187832 YP_001256076.1 CDS fabZ NC_009495.1 3841148 3841582 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(3841148..3841582) Clostridium botulinum A str. ATCC 3502 5186639 YP_001256077.1 CDS accB NC_009495.1 3841602 3842078 R acetyl-CoA carboxylase biotin carboxyl carrier protein complement(3841602..3842078) Clostridium botulinum A str. ATCC 3502 5187854 YP_001256078.1 CDS fabF NC_009495.1 3842082 3843329 R FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase complement(3842082..3843329) Clostridium botulinum A str. ATCC 3502 5187852 YP_001256079.1 CDS fabG NC_009495.1 3843340 3844098 R catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(3843340..3844098) Clostridium botulinum A str. ATCC 3502 5185389 YP_001256080.1 CDS fabD NC_009495.1 3844104 3845048 R malonyl CoA-acyl carrier protein transacylase complement(3844104..3845048) Clostridium botulinum A str. ATCC 3502 5187355 YP_001256081.1 CDS CBO3602 NC_009495.1 3845069 3845995 R oxidoreductase, 2-nitropropane dioxygenase complement(3845069..3845995) Clostridium botulinum A str. ATCC 3502 5186147 YP_001256082.1 CDS acpP NC_009495.1 3846121 3846345 R acyl carrier protein complement(3846121..3846345) Clostridium botulinum A str. ATCC 3502 5187846 YP_001256083.1 CDS fabH NC_009495.1 3846386 3847366 R 3-oxoacyl-ACP synthase complement(3846386..3847366) Clostridium botulinum A str. ATCC 3502 5187781 YP_001256084.1 CDS CBO3604A NC_009495.1 3847359 3847835 R MarR family transcriptional regulator complement(3847359..3847835) Clostridium botulinum A str. ATCC 3502 5204341 YP_001256085.1 CDS CBO3605 NC_009495.1 3847851 3848909 R oxidoreductase, 2-nitropropane dioxygenase complement(3847851..3848909) Clostridium botulinum A str. ATCC 3502 5187191 YP_001256086.1 CDS CBO3606 NC_009495.1 3849006 3849941 R peptidase complement(3849006..3849941) Clostridium botulinum A str. ATCC 3502 5187729 YP_001256087.1 CDS CBO3607 NC_009495.1 3850122 3851108 D DNA replication protein DnaD 3850122..3851108 Clostridium botulinum A str. ATCC 3502 5187606 YP_001256088.1 CDS dnaC NC_009495.1 3851101 3852078 D acts to load the DnaB helicase onto the initiation site during DNA replication; DNA replication protein DnaC 3851101..3852078 Clostridium botulinum A str. ATCC 3502 5184368 YP_001256089.1 CDS CBO3611 NC_009495.1 3853324 3854133 R hypothetical protein complement(3853324..3854133) Clostridium botulinum A str. ATCC 3502 5187756 YP_001256090.1 CDS CBO3612 NC_009495.1 3854146 3854520 R CoA-binding protein complement(3854146..3854520) Clostridium botulinum A str. ATCC 3502 5187315 YP_001256091.1 CDS CBO3613 NC_009495.1 3854701 3855930 D pyridine nucleotide-disulfide oxidoreductase 3854701..3855930 Clostridium botulinum A str. ATCC 3502 5185868 YP_001256092.1 CDS CBO3614 NC_009495.1 3856032 3856781 R acyl-ACP thioesterase complement(3856032..3856781) Clostridium botulinum A str. ATCC 3502 5186630 YP_001256093.1 CDS CBO3615 NC_009495.1 3856884 3857069 R hypothetical protein complement(3856884..3857069) Clostridium botulinum A str. ATCC 3502 5186527 YP_001256094.1 CDS adeK NC_009495.1 3857195 3858481 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(3857195..3858481) Clostridium botulinum A str. ATCC 3502 5184592 YP_001256095.1 CDS CBO3617 NC_009495.1 3858713 3860098 R pyridine nucleotide-disulfide oxidoreductase complement(3858713..3860098) Clostridium botulinum A str. ATCC 3502 5187876 YP_001256096.1 CDS CBO3618 NC_009495.1 3860264 3860479 R hypothetical protein complement(3860264..3860479) Clostridium botulinum A str. ATCC 3502 5184855 YP_001256097.1 CDS CBO3619 NC_009495.1 3860672 3862393 R phosphoglucomutase/phosphomannomutase complement(3860672..3862393) Clostridium botulinum A str. ATCC 3502 5187079 YP_001256098.1 CDS dnaB NC_009495.1 3862635 3863972 R unwinds double stranded DNA; replicative DNA helicase complement(3862635..3863972) Clostridium botulinum A str. ATCC 3502 5186425 YP_001256099.1 CDS lon NC_009495.1 3864003 3865922 R ATP-dependent protease La complement(3864003..3865922) Clostridium botulinum A str. ATCC 3502 5187871 YP_001256100.1 CDS rplI NC_009495.1 3865933 3866376 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(3865933..3866376) Clostridium botulinum A str. ATCC 3502 5187076 YP_001256101.1 CDS CBO3623 NC_009495.1 3866376 3868361 R DHH family protein complement(3866376..3868361) Clostridium botulinum A str. ATCC 3502 5187879 YP_001256102.1 CDS CBO3624 NC_009495.1 3868362 3869366 R hypothetical protein complement(3868362..3869366) Clostridium botulinum A str. ATCC 3502 5187594 YP_001256103.1 CDS CBO3625 NC_009495.1 3869378 3869695 R hypothetical protein complement(3869378..3869695) Clostridium botulinum A str. ATCC 3502 5187456 YP_001256104.1 CDS rpsR NC_009495.1 3869843 3870085 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(3869843..3870085) Clostridium botulinum A str. ATCC 3502 5188014 YP_001256105.1 CDS ssBb NC_009495.1 3870104 3870550 R single-strand binding protein complement(3870104..3870550) Clostridium botulinum A str. ATCC 3502 5187139 YP_001256106.1 CDS rpsF NC_009495.1 3870566 3870850 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(3870566..3870850) Clostridium botulinum A str. ATCC 3502 5187884 YP_001256107.1 CDS CBO3629 NC_009495.1 3870956 3872104 R 2-hydroxyacyl-CoA dehydratase subunit beta complement(3870956..3872104) Clostridium botulinum A str. ATCC 3502 5186846 YP_001256108.1 CDS CBO3630 NC_009495.1 3872378 3872575 R hypothetical protein complement(3872378..3872575) Clostridium botulinum A str. ATCC 3502 5185049 YP_001256109.1 CDS CBO3631 NC_009495.1 3872591 3873460 R mechanosensitive ion channel family protein complement(3872591..3873460) Clostridium botulinum A str. ATCC 3502 5187622 YP_001256110.1 CDS CBO3632 NC_009495.1 3873467 3873712 R hypothetical protein complement(3873467..3873712) Clostridium botulinum A str. ATCC 3502 5184630 YP_001256111.1 CDS csdB NC_009495.1 3873903 3875057 D cysteine desulfurase 3873903..3875057 Clostridium botulinum A str. ATCC 3502 5187889 YP_001256112.1 CDS CBO3634 NC_009495.1 3875071 3876126 D sporulation integral membrane protein YtvI 3875071..3876126 Clostridium botulinum A str. ATCC 3502 5185766 YP_001256113.1 CDS CBO3635 NC_009495.1 3876184 3876765 D hypothetical protein 3876184..3876765 Clostridium botulinum A str. ATCC 3502 5187888 YP_001256114.1 CDS CBO3636 NC_009495.1 3876767 3877012 R hypothetical protein complement(3876767..3877012) Clostridium botulinum A str. ATCC 3502 5204334 YP_001256115.1 CDS CBO3637 NC_009495.1 3877065 3877574 R hypothetical protein complement(3877065..3877574) Clostridium botulinum A str. ATCC 3502 5204335 YP_001256116.1 CDS spo0J NC_009495.1 3877612 3878460 R Also similar to CBO3640 (44.488 38d. in 254 aa overlap).; stage 0 sporulation protein J complement(3877612..3878460) Clostridium botulinum A str. ATCC 3502 5204336 YP_001256117.1 CDS soj NC_009495.1 3878476 3879240 R sporulation initiation inhibitor protein soj complement(3878476..3879240) Clostridium botulinum A str. ATCC 3502 5204356 YP_001256118.1 CDS CBO3640 NC_009495.1 3879367 3880146 R Also similar to CBO3638 (44.488 38d. in 254 aa overlap).; parB family protein complement(3879367..3880146) Clostridium botulinum A str. ATCC 3502 5204355 YP_001256119.1 CDS gidB NC_009495.1 3880246 3880965 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(3880246..3880965) Clostridium botulinum A str. ATCC 3502 5204337 YP_001256120.1 CDS gidA NC_009495.1 3880989 3882866 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(3880989..3882866) Clostridium botulinum A str. ATCC 3502 5204343 YP_001256121.1 CDS trmE NC_009495.1 3882875 3884260 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(3882875..3884260) Clostridium botulinum A str. ATCC 3502 5204342 YP_001256122.1 CDS jag NC_009495.1 3884308 3884946 R DNA/RNA-binding protein complement(3884308..3884946) Clostridium botulinum A str. ATCC 3502 5204346 YP_001256123.1 CDS oxaA1 NC_009495.1 3884952 3885605 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC complement(3884952..3885605) Clostridium botulinum A str. ATCC 3502 5204345 YP_001256124.1 CDS CBO3646 NC_009495.1 3885631 3885840 R hypothetical protein complement(3885631..3885840) Clostridium botulinum A str. ATCC 3502 5204349 YP_001256125.1 CDS rnpA NC_009495.1 3885837 3886172 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(3885837..3886172) Clostridium botulinum A str. ATCC 3502 5204338 YP_001256126.1 CDS rpmH NC_009495.1 3886227 3886361 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(3886227..3886361) Clostridium botulinum A str. ATCC 3502 5204351 YP_001256127.1 CDS dnaE NC_009496.1 1 3585 R catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria.; DNA polymerase III DnaE complement(1..3585) Clostridium botulinum A str. ATCC 3502 5188018 YP_001256128.1 CDS CBOP02 NC_009496.1 3754 3951 R hypothetical protein complement(3754..3951) Clostridium botulinum A str. ATCC 3502 5188036 YP_001256129.1 CDS CBOP04 NC_009496.1 4356 4556 D hypothetical protein 4356..4556 Clostridium botulinum A str. ATCC 3502 5188021 YP_001256130.1 CDS CBOP005 NC_009496.1 4798 5343 D site-specific recombinase 4798..5343 Clostridium botulinum A str. ATCC 3502 5188022 YP_001256131.1 CDS CBOP06 NC_009496.1 5464 6117 D putative DNA-binding protein 5464..6117 Clostridium botulinum A str. ATCC 3502 5188019 YP_001256132.1 CDS CBOP07 NC_009496.1 6306 6569 D hypothetical protein 6306..6569 Clostridium botulinum A str. ATCC 3502 5188023 YP_001256133.1 CDS CBOP08 NC_009496.1 6619 6810 D hypothetical protein 6619..6810 Clostridium botulinum A str. ATCC 3502 5188024 YP_001256134.1 CDS CBOP09 NC_009496.1 6921 7064 D hypothetical protein 6921..7064 Clostridium botulinum A str. ATCC 3502 5188025 YP_001256135.1 CDS CBOP10 NC_009496.1 7133 7282 D hypothetical protein 7133..7282 Clostridium botulinum A str. ATCC 3502 5188026 YP_001256136.1 CDS CBOP11 NC_009496.1 7704 8258 D Weakly Similar to Pediococcus pentosaceus plasmid orf1 TR:Q9X3B9 (EMBL:AF069302) (111 aa) fasta scores: E(): 0.0014, 33.000 38d in 100 aa, and to Pediococcus pentosaceus mobc-like protein TR:Q9RHE2 (EMBL:AF033858) (73 aa) fasta scores: E(): 0.6, 36.111 38d in 72 aa, and to Pasteurella multocida, mbecy or mobC TR:Q51926 (EMBL:U57647) (101 aa) fasta scores: E(): 0.77, 29.808 38d in 104 aa; mobilisation protein 7704..8258 Clostridium botulinum A str. ATCC 3502 5188027 YP_001256137.1 CDS CBOP12 NC_009496.1 8219 8989 D Similar to Staphylococcus aureus Plasmid pS194 rlx protein SW:RLX1_STAAU (P12054) (320 aa) fasta scores: E(): 6.8e-15, 33.333 38d in 252 aa, and to Fusobacterium nucleatum DNA relaxation protein homolog rlxA TR:Q9L9V7 (EMBL:AF159249) (348 aa) fasta scores: E(): 8.4e-15,36.458 38d in 288 aa, and to Staphylococcus epidermidis mobilization protein moba2 TR:Q9R968 (EMBL:AF045472) (337 aa) fasta scores: E(): 4.4e-13, 25.681 38d in 257 aa; mobilisation protein 8219..8989 Clostridium botulinum A str. ATCC 3502 5188028 YP_001256138.1 CDS CBOP13 NC_009496.1 9252 9509 D hypothetical protein 9252..9509 Clostridium botulinum A str. ATCC 3502 5188029 YP_001256139.1 CDS CBOP14 NC_009496.1 9738 9929 D hypothetical protein 9738..9929 Clostridium botulinum A str. ATCC 3502 5188030 YP_001256140.1 CDS CBOP15 NC_009496.1 10033 11325 D putative bacteriocin biosynthesis protein 10033..11325 Clostridium botulinum A str. ATCC 3502 5188031 YP_001256141.1 CDS btcB NC_009496.1 11531 11692 D bacteriocin 11531..11692 Clostridium botulinum A str. ATCC 3502 5188032 YP_001256142.1 CDS CBOP17 NC_009496.1 11905 13080 D May be involved in bacteriocin maturation/secretion. Similar to Sulfolobus solfataricus zn-dependent protease, TldD protein homolog, putative tldD TR:AAK40965 (EMBL:AE006693) (443 aa) fasta scores: E(): 5.2e-13, 30.736 38d in 231 aa, and to Escherichia coli tldd protein tldd or b3244 SW:TLDD_ECOLI (P46473) (481 aa) fasta scores: E(): 1.6e-11, 27.306 38d in 271 aa; TldD family protein 11905..13080 Clostridium botulinum A str. ATCC 3502 5188035 YP_001256143.1 CDS CBOP18 NC_009496.1 13067 14290 D May be involved in bacteriocin maturation/secretion. Similar to Buchnera aphidicola (subspAcyrthosiphon pisum) (Acyrthosiphon pisum pmba protein homolog pmba or bu089 SW:PMBA_BUCAI (P57191) (446 aa) fasta scores: E(): 0.19, 23.797 38d in 395 aa, and to Escherichia coli pmba protein pmba or tlde or b4235 SW:PMBA_ECOLI (P24231) (450 aa) fasta scores: E(): 0.98,20.716 38d in 391 aa; PmbA family protein 13067..14290 Clostridium botulinum A str. ATCC 3502 5188033 YP_001256144.1 CDS CBOP19 NC_009496.1 14411 16054 D May be involved in bacteriocin secretion. Contains IM domain at N-terminus and ATP-binding domain at C-terminus. Similar to Campylobacter jejuni lipid export ABC transport protein msba or cj0803 TR:Q9PPB7 (EMBL:AL139076) (580 aa) fasta scores: E(): 4.6e-36,28.755 38d in 546 aa, and to Synechocystis sp hlyb family hlyb or sll1180 TR:P74176 (EMBL:D90913) (1011 aa) fasta scores: E(): 1e-32, 26.488 38d in 521 aa, and to Leuconostoc mesenteroides mesentericin y105 transport ATP-binding protein MesD mesD SW:MESD_LEUME (Q10418) (722 aa) fasta scores: E(): 3.1e-31, 27.370 38d in 559 aa; ABC transporter 14411..16054 Clostridium botulinum A str. ATCC 3502 5188034 CBOt079 tRNA tRNA_Met(CAT) NC_009495.1 14107 14183 D tRNA-Met 14107..14183 Clostridium botulinum A str. ATCC 3502 5186982 CBOt029 tRNA tRNA_Ala(TGC) NC_009495.1 14187 14262 D tRNA-Ala 14187..14262 Clostridium botulinum A str. ATCC 3502 5187942 CBOt093 tRNA tRNA_Ser(TGA) NC_009495.1 23898 23988 D tRNA-Ser 23898..23988 Clostridium botulinum A str. ATCC 3502 5187812 CBOt090 tRNA tRNA_Ser(GCT) NC_009495.1 24009 24099 D tRNA-Ser 24009..24099 Clostridium botulinum A str. ATCC 3502 5187956 CBOt094 tRNA tRNA_Ser(TGA) NC_009495.1 24406 24496 D tRNA-Ser 24406..24496 Clostridium botulinum A str. ATCC 3502 5187953 CBOt091 tRNA tRNA_Ser(GCT) NC_009495.1 24517 24607 D tRNA-Ser 24517..24607 Clostridium botulinum A str. ATCC 3502 5187957 CBOt033 tRNA tRNA_Arg(ACG) NC_009495.1 24692 24768 D tRNA-Arg 24692..24768 Clostridium botulinum A str. ATCC 3502 5187954 CBOt034 tRNA tRNA_Arg(CCT) NC_009495.1 33779 33855 D tRNA-Arg 33779..33855 Clostridium botulinum A str. ATCC 3502 5184274 CBOt092 tRNA tRNA_Ser(GGA) NC_009495.1 37616 37705 D tRNA-Ser 37616..37705 Clostridium botulinum A str. ATCC 3502 5184276 CBOt075 tRNA tRNA_Lys(TTT) NC_009495.1 53322 53397 D tRNA-Lys 53322..53397 Clostridium botulinum A str. ATCC 3502 5186983 CBOt030 tRNA tRNA_Ala(TGC) NC_009495.1 56726 56801 D tRNA-Ala 56726..56801 Clostridium botulinum A str. ATCC 3502 5186966 CBOt065 tRNA tRNA_Ile(GAT) NC_009495.1 56807 56883 D tRNA-Ile 56807..56883 Clostridium botulinum A str. ATCC 3502 5187893 CBOt076 tRNA tRNA_Lys(TTT) NC_009495.1 60114 60189 D tRNA-Lys 60114..60189 Clostridium botulinum A str. ATCC 3502 5186984 CBOt083 tRNA tRNA_Phe(GAA) NC_009495.1 68033 68108 D tRNA-Phe 68033..68108 Clostridium botulinum A str. ATCC 3502 5186985 CBOt084 tRNA tRNA_Phe(GAA) NC_009495.1 75038 75113 D tRNA-Phe 75038..75113 Clostridium botulinum A str. ATCC 3502 5186986 CBOt046 tRNA tRNA_Cys(GCA) NC_009495.1 82561 82634 D tRNA-Cys 82561..82634 Clostridium botulinum A str. ATCC 3502 5184290 CBOt096 tRNA tRNA_Thr(TGT) NC_009495.1 200023 200098 D tRNA-Thr 200023..200098 Clostridium botulinum A str. ATCC 3502 5184373 CBOt101 tRNA tRNA_Tyr(GTA) NC_009495.1 200104 200188 D tRNA-Tyr 200104..200188 Clostridium botulinum A str. ATCC 3502 5187959 CBOt103 tRNA tRNA_Val(TAC) NC_009495.1 200202 200277 D tRNA-Val 200202..200277 Clostridium botulinum A str. ATCC 3502 5187964 CBOt097 tRNA tRNA_Thr(TGT) NC_009495.1 200295 200370 D tRNA-Thr 200295..200370 Clostridium botulinum A str. ATCC 3502 5187966 CBOt102 tRNA tRNA_Tyr(GTA) NC_009495.1 200376 200460 D tRNA-Tyr 200376..200460 Clostridium botulinum A str. ATCC 3502 5187960 CBOt048 tRNA tRNA_Gln(CTG) NC_009495.1 227165 227239 R tRNA-Gln complement(227165..227239) Clostridium botulinum A str. ATCC 3502 5184388 CBOt031 tRNA tRNA_Ala(TGC) NC_009495.1 490683 490758 D tRNA-Ala 490683..490758 Clostridium botulinum A str. ATCC 3502 5186970 CBOt066 tRNA tRNA_Ile(GAT) NC_009495.1 490764 490840 D tRNA-Ile 490764..490840 Clostridium botulinum A str. ATCC 3502 5187894 CBOt039 tRNA tRNA_Asn(GTT) NC_009495.1 494073 494147 D tRNA-Asn 494073..494147 Clostridium botulinum A str. ATCC 3502 5186988 CBOt051 tRNA tRNA_Glu(CTC) NC_009495.1 568345 568419 D tRNA-Glu 568345..568419 Clostridium botulinum A str. ATCC 3502 5184616 CBOt028 tRNA tRNA NC_009495.1 1839545 1839631 D tRNA-OTHER 1839545..1839631 Clostridium botulinum A str. ATCC 3502 5185580 CBOt089 tRNA tRNA_SeC(p)(TCA) NC_009495.1 3168008 3168098 R tRNA-OTHER complement(3168008..3168098) Clostridium botulinum A str. ATCC 3502 5186564 CBOt069 tRNA tRNA_Leu(GAG) NC_009495.1 3202626 3202710 R tRNA-Leu complement(3202626..3202710) Clostridium botulinum A str. ATCC 3502 5186581 CBOt068 tRNA tRNA_Leu(CAA) NC_009495.1 3234664 3234750 R tRNA-Leu complement(3234664..3234750) Clostridium botulinum A str. ATCC 3502 5186615 CBOt047 tRNA tRNA_Cys(GCA) NC_009495.1 3344971 3345044 R tRNA-Cys complement(3344971..3345044) Clostridium botulinum A str. ATCC 3502 5186674 CBOt056 tRNA tRNA_Gly(GCC) NC_009495.1 3345054 3345128 R tRNA-Gly complement(3345054..3345128) Clostridium botulinum A str. ATCC 3502 5187910 CBOt085 tRNA tRNA_Phe(GAA) NC_009495.1 3345133 3345208 R tRNA-Phe complement(3345133..3345208) Clostridium botulinum A str. ATCC 3502 5187919 CBOt042 tRNA tRNA_Asp(GTC) NC_009495.1 3345212 3345288 R tRNA-Asp complement(3345212..3345288) Clostridium botulinum A str. ATCC 3502 5187948 CBOt104 tRNA tRNA_Val(TAC) NC_009495.1 3345294 3345369 R tRNA-Val complement(3345294..3345369) Clostridium botulinum A str. ATCC 3502 5187905 CBOt035 tRNA tRNA_Arg(TCG) NC_009495.1 3462527 3462603 R tRNA-Arg complement(3462527..3462603) Clostridium botulinum A str. ATCC 3502 5186755 CBOt059 tRNA tRNA_Gly(TCC) NC_009495.1 3462629 3462702 R tRNA-Gly complement(3462629..3462702) Clostridium botulinum A str. ATCC 3502 5187898 CBOt087 tRNA tRNA_Pro(TGG) NC_009495.1 3462732 3462807 R tRNA-Pro complement(3462732..3462807) Clostridium botulinum A str. ATCC 3502 5187922 CBOt073 tRNA tRNA_Lys(CTT) NC_009495.1 3462834 3462909 R tRNA-Lys complement(3462834..3462909) Clostridium botulinum A str. ATCC 3502 5187950 CBOt036 tRNA tRNA_Arg(TCT) NC_009495.1 3462915 3462991 R tRNA-Arg complement(3462915..3462991) Clostridium botulinum A str. ATCC 3502 5187936 CBOt060 tRNA tRNA_Gly(TCC) NC_009495.1 3462998 3463071 R tRNA-Gly complement(3462998..3463071) Clostridium botulinum A str. ATCC 3502 5187899 CBOt057 tRNA tRNA_Gly(GCC) NC_009495.1 3463080 3463154 R tRNA-Gly complement(3463080..3463154) Clostridium botulinum A str. ATCC 3502 5187923 CBOt071 tRNA tRNA_Leu(TAG) NC_009495.1 3463221 3463304 R tRNA-Leu complement(3463221..3463304) Clostridium botulinum A str. ATCC 3502 5187920 CBOt077 tRNA tRNA_Lys(TTT) NC_009495.1 3463320 3463395 R tRNA-Lys complement(3463320..3463395) Clostridium botulinum A str. ATCC 3502 5187934 CBOt049 tRNA tRNA_Gln(TTG) NC_009495.1 3463399 3463473 R tRNA-Gln complement(3463399..3463473) Clostridium botulinum A str. ATCC 3502 5187940 CBOt063 tRNA tRNA_His(GTG) NC_009495.1 3463478 3463553 R tRNA-His complement(3463478..3463553) Clostridium botulinum A str. ATCC 3502 5187912 CBOt074 tRNA tRNA_Lys(CTT) NC_009495.1 3463569 3463644 R tRNA-Lys complement(3463569..3463644) Clostridium botulinum A str. ATCC 3502 5187926 CBOt037 tRNA tRNA_Arg(TCT) NC_009495.1 3463650 3463726 R tRNA-Arg complement(3463650..3463726) Clostridium botulinum A str. ATCC 3502 5187937 CBOt061 tRNA tRNA_Gly(TCC) NC_009495.1 3463733 3463806 R tRNA-Gly complement(3463733..3463806) Clostridium botulinum A str. ATCC 3502 5187900 CBOt058 tRNA tRNA_Gly(GCC) NC_009495.1 3463815 3463889 R tRNA-Gly complement(3463815..3463889) Clostridium botulinum A str. ATCC 3502 5187924 CBOt072 tRNA tRNA_Leu(TAG) NC_009495.1 3463956 3464039 R tRNA-Leu complement(3463956..3464039) Clostridium botulinum A str. ATCC 3502 5187921 CBOt078 tRNA tRNA_Lys(TTT) NC_009495.1 3464055 3464130 R tRNA-Lys complement(3464055..3464130) Clostridium botulinum A str. ATCC 3502 5187935 CBOt050 tRNA tRNA_Gln(TTG) NC_009495.1 3464134 3464208 R tRNA-Gln complement(3464134..3464208) Clostridium botulinum A str. ATCC 3502 5187941 CBOt064 tRNA tRNA_His(GTG) NC_009495.1 3464213 3464288 R tRNA-His complement(3464213..3464288) Clostridium botulinum A str. ATCC 3502 5187913 CBOt038 tRNA tRNA_Arg(TCT) NC_009495.1 3464296 3464372 R tRNA-Arg complement(3464296..3464372) Clostridium botulinum A str. ATCC 3502 5187927 CBOt062 tRNA tRNA_Gly(TCC) NC_009495.1 3464379 3464452 R tRNA-Gly complement(3464379..3464452) Clostridium botulinum A str. ATCC 3502 5187901 CBOt088 tRNA tRNA_Pro(TGG) NC_009495.1 3464460 3464535 R tRNA-Pro complement(3464460..3464535) Clostridium botulinum A str. ATCC 3502 5187925 CBOt100 tRNA tRNA_Trp(CCA) NC_009495.1 3535523 3535598 R tRNA-Trp complement(3535523..3535598) Clostridium botulinum A str. ATCC 3502 5186788 CBOt095 tRNA tRNA_Thr(GGT) NC_009495.1 3725147 3725222 R tRNA-Thr complement(3725147..3725222) Clostridium botulinum A str. ATCC 3502 5187981 CBOt055 tRNA tRNA_Gly(CCC) NC_009495.1 3725241 3725315 R tRNA-Gly complement(3725241..3725315) Clostridium botulinum A str. ATCC 3502 5187958 CBOt040 tRNA tRNA_Asn(GTT) NC_009495.1 3745993 3746067 R tRNA-Asn complement(3745993..3746067) Clostridium botulinum A str. ATCC 3502 5187323 CBOt041 tRNA tRNA_Asn(GTT) NC_009495.1 3746095 3746169 R tRNA-Asn complement(3746095..3746169) Clostridium botulinum A str. ATCC 3502 5187903 CBOt067 tRNA tRNA_Ile(GAT) NC_009495.1 3749361 3749437 R tRNA-Ile complement(3749361..3749437) Clostridium botulinum A str. ATCC 3502 5186980 CBOt032 tRNA tRNA_Ala(TGC) NC_009495.1 3751251 3751326 R tRNA-Ala complement(3751251..3751326) Clostridium botulinum A str. ATCC 3502 5186971 CBOt080 tRNA tRNA_Met(CAT) NC_009495.1 3751332 3751408 R tRNA-Met complement(3751332..3751408) Clostridium botulinum A str. ATCC 3502 5187895 CBOt081 tRNA tRNA_Met(CAT) NC_009495.1 3774230 3774306 R tRNA-Met complement(3774230..3774306) Clostridium botulinum A str. ATCC 3502 5186892 CBOt082 tRNA tRNA_Met(CAT) NC_009495.1 3774311 3774386 R tRNA-Met complement(3774311..3774386) Clostridium botulinum A str. ATCC 3502 5187944 CBOt070 tRNA tRNA_Leu(TAA) NC_009495.1 3774391 3774479 R tRNA-Leu complement(3774391..3774479) Clostridium botulinum A str. ATCC 3502 5187945 CBOt086 tRNA tRNA_Pro(TGG) NC_009495.1 3795408 3795483 D tRNA-Pro 3795408..3795483 Clostridium botulinum A str. ATCC 3502 5186902 CBOt098 tRNA tRNA_Thr(TGT) NC_009495.1 3852169 3852244 R tRNA-Thr complement(3852169..3852244) Clostridium botulinum A str. ATCC 3502 5187217 CBOt043 tRNA tRNA_Asp(GTC) NC_009495.1 3852249 3852325 R tRNA-Asp complement(3852249..3852325) Clostridium botulinum A str. ATCC 3502 5187961 CBOt105 tRNA tRNA_Val(TAC) NC_009495.1 3852335 3852410 R tRNA-Val complement(3852335..3852410) Clostridium botulinum A str. ATCC 3502 5187906 CBOt052 tRNA tRNA_Glu(TTC) NC_009495.1 3852428 3852502 R tRNA-Glu complement(3852428..3852502) Clostridium botulinum A str. ATCC 3502 5187968 CBOt044 tRNA tRNA_Asp(GTC) NC_009495.1 3852560 3852636 R tRNA-Asp complement(3852560..3852636) Clostridium botulinum A str. ATCC 3502 5187915 CBOt106 tRNA tRNA_Val(TAC) NC_009495.1 3852644 3852719 R tRNA-Val complement(3852644..3852719) Clostridium botulinum A str. ATCC 3502 5187907 CBOt053 tRNA tRNA_Glu(TTC) NC_009495.1 3852738 3852812 R tRNA-Glu complement(3852738..3852812) Clostridium botulinum A str. ATCC 3502 5187969 CBOt099 tRNA tRNA_Thr(TGT) NC_009495.1 3852818 3852893 R tRNA-Thr complement(3852818..3852893) Clostridium botulinum A str. ATCC 3502 5187916 CBOt045 tRNA tRNA_Asp(GTC) NC_009495.1 3852898 3852974 R tRNA-Asp complement(3852898..3852974) Clostridium botulinum A str. ATCC 3502 5187962 CBOt107 tRNA tRNA_Val(TAC) NC_009495.1 3852984 3853059 R tRNA-Val complement(3852984..3853059) Clostridium botulinum A str. ATCC 3502 5187908 CBOt054 tRNA tRNA_Glu(TTC) NC_009495.1 3853077 3853151 R tRNA-Glu complement(3853077..3853151) Clostridium botulinum A str. ATCC 3502 5187970 CBOr001 rRNA 16S_rRNA NC_009495.1 9258 10781 D 16S ribosomal RNA 9258..10781 Clostridium botulinum A str. ATCC 3502 5187397 CBOr010 rRNA 23S_rRNA NC_009495.1 10989 13893 D 23S ribosomal RNA 10989..13893 Clostridium botulinum A str. ATCC 3502 5186964 CBOr019 rRNA 5S_rRNA NC_009495.1 13982 14107 D 5S ribosomal RNA 13982..14107 Clostridium botulinum A str. ATCC 3502 5186973 CBOr002 rRNA 16S_rRNA NC_009495.1 48444 49967 D 16S ribosomal RNA 48444..49967 Clostridium botulinum A str. ATCC 3502 5184284 CBOr011 rRNA 23S_rRNA NC_009495.1 50176 53077 D 23S ribosomal RNA 50176..53077 Clostridium botulinum A str. ATCC 3502 5186965 CBOr020 rRNA 5S_rRNA NC_009495.1 53199 53324 D 5S ribosomal RNA 53199..53324 Clostridium botulinum A str. ATCC 3502 5186974 CBOr003 rRNA 16S_rRNA NC_009495.1 55072 56595 D 16S ribosomal RNA 55072..56595 Clostridium botulinum A str. ATCC 3502 5184285 CBOr012 rRNA 23S_rRNA NC_009495.1 56957 59858 D 23S ribosomal RNA 56957..59858 Clostridium botulinum A str. ATCC 3502 5187928 CBOr021 rRNA 5S_rRNA NC_009495.1 59991 60116 D 5S ribosomal RNA 59991..60116 Clostridium botulinum A str. ATCC 3502 5186975 CBOr004 rRNA 16S_rRNA NC_009495.1 63170 64693 D 16S ribosomal RNA 63170..64693 Clostridium botulinum A str. ATCC 3502 5184287 CBOr013 rRNA 23S_rRNA NC_009495.1 64902 67803 D 23S ribosomal RNA 64902..67803 Clostridium botulinum A str. ATCC 3502 5186967 CBOr022 rRNA 5S_rRNA NC_009495.1 67909 68034 D 5S ribosomal RNA 67909..68034 Clostridium botulinum A str. ATCC 3502 5186976 CBOr005 rRNA 16S_rRNA NC_009495.1 70229 71752 D 16S ribosomal RNA 70229..71752 Clostridium botulinum A str. ATCC 3502 5187214 CBOr014 rRNA 23S_rRNA NC_009495.1 71960 74861 D 23S ribosomal RNA 71960..74861 Clostridium botulinum A str. ATCC 3502 5186968 CBOr023 rRNA 5S_rRNA NC_009495.1 74914 75039 D 5S ribosomal RNA 74914..75039 Clostridium botulinum A str. ATCC 3502 5186977 CBOr006 rRNA 16S_rRNA NC_009495.1 76510 78033 D 16S ribosomal RNA 76510..78033 Clostridium botulinum A str. ATCC 3502 5184289 CBOr015 rRNA 23S_rRNA NC_009495.1 78242 81143 D 23S ribosomal RNA 78242..81143 Clostridium botulinum A str. ATCC 3502 5186969 CBOr024 rRNA 5S_rRNA NC_009495.1 81249 81374 D 5S ribosomal RNA 81249..81374 Clostridium botulinum A str. ATCC 3502 5186978 CBOr007 rRNA 16S_rRNA NC_009495.1 489029 490552 D 16S ribosomal RNA 489029..490552 Clostridium botulinum A str. ATCC 3502 5187989 CBOr016 rRNA 23S_rRNA NC_009495.1 490914 493815 D 23S ribosomal RNA 490914..493815 Clostridium botulinum A str. ATCC 3502 5187929 CBOr025 rRNA 5S_rRNA NC_009495.1 493948 494073 D 5S ribosomal RNA 493948..494073 Clostridium botulinum A str. ATCC 3502 5186979 CBOr026 rRNA 5S_rRNA NC_009495.1 3746170 3746295 R 5S ribosomal RNA complement(3746170..3746295) Clostridium botulinum A str. ATCC 3502 5187904 CBOr017 rRNA 23S_rRNA NC_009495.1 3746384 3749288 R 23S ribosomal RNA complement(3746384..3749288) Clostridium botulinum A str. ATCC 3502 5186989 CBOr008 rRNA 16S_rRNA NC_009495.1 3749511 3751034 R 16S ribosomal RNA complement(3749511..3751034) Clostridium botulinum A str. ATCC 3502 5187930 CBOr027 rRNA 5S_rRNA NC_009495.1 3751408 3751533 R 5S ribosomal RNA complement(3751408..3751533) Clostridium botulinum A str. ATCC 3502 5187943 CBOr018 rRNA 23S_rRNA NC_009495.1 3751622 3754526 R 23S ribosomal RNA complement(3751622..3754526) Clostridium botulinum A str. ATCC 3502 5186990 CBOr009 rRNA 16S_rRNA NC_009495.1 3754735 3756258 R 16S ribosomal RNA complement(3754735..3756258) Clostridium botulinum A str. ATCC 3502 5186981