-- dump date   	20140619_043348
-- class       	Genbank::Gene
-- table       	gene_note
-- id	note
7816298	putative IS transposase; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to RF:YP_398601.1
7816127	DNA methylase N-4/N-6 domain protein; this gene contains a premature stop which is not the result of sequencing error; identified by similarity to GB:BAD49551.1
7816035	ATP-dependent DNA helicase RecG; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to SP:Q54900; match to protein family HMM PF00270; match to protein family HMM PF04851
7880283	dltD protein, degenerate; this region contains one or more premature stops and/or frameshifts
7878824	oxidoreductase, FAD/FMN-binding; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to SP:P32382; match to protein family HMM PF00724
7877619	xanthine dehydrogenase, molybdenum binding subunit; this region contains one or more premature stops and/or frameshifts; identified by similarity to SP:Q46799
7878947	glycosyl transferase, family 39; this gene contains a premature stop which is not the result of sequencing error; identified by similarity to GB:AAK80208.1; match to protein family HMM PF02366
7880746	conserved hypothetical protein, truncation; comparison of this gene to its homologs suggests this gene has been truncated; identified by similarity to GB:ABO50932.1
7879416	conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to GB:ABG84512.1
7879959	conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to GB:AAK81364.1
7878349	transcriptional regulator, truncation; comparison of this gene to its homologs suggests this gene has been truncated; identified by similarity to SP:P39842
7879537	cobA/hemD
7878723	glucuronide carrier protein; this region contains one or more premature stops and/or frameshifts; identified by similarity to SP:P96792
7877964	putative membrane protein; this region contains one or more premature stops and/or frameshifts; identified by similarity to GB:ABB06274.1
7879835	cell wall hydrolase family protein; this gene contains a premature stop which is not the result of sequencing error; identified by similarity to GB:ABO51302.1; match to protein family HMM PF07486
7879497	conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to GB:AAO35910.1
7879321	peptide/opine/nickel uptake ABC transporter, PepT family, ATP-binding protein, frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to GB:ABG57752.1; match to protein family HMM PF00005
7878937	amino acid transporter; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to GB:CAJ69352.1
7880969	putative thermolysin; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to SP:P05806; match to protein family HMM PF03413
7878738	conserved hypothetical protein; this region contains one or more premature stops and/or frameshifts; identified by similarity to GB:ABR48702.1
7881184	conserved hypothetical protein; this region contains one or more premature stops and/or frameshifts
7878237	PTS system, fructose family, IIA component; this region contains one or more premature stops and/or frameshifts; identified by match to protein family HMM PF00359; match to protein family HMM TIGR00848
7879761	DNA-binding protein, point mutation; this gene contains a premature stop which is not the result of sequencing error; identified by similarity to GB:AAK79431.1
7878380	ISSod4, transposase; this region contains one or more premature stops and/or frameshifts
7878232	ISSod4, transposase; this region contains one or more premature stops and/or frameshifts
7881128	transposase in Marinococcus halophilus; this region contains one or more premature stops and/or frameshifts
7879653	phospholipase C zinc-binding; this region contains one or more premature stops and/or frameshifts
7880733	bacterial microcompartments family protein; this region contains one or more premature stops and/or frameshifts; identified by match to protein family HMM PF00936
7879072	conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to GB:AAT54938.1
7879253	putative membrane protein; this region contains one or more premature stops and/or frameshifts
7879224	putative peptidase, degenerate; this region contains one or more premature stops and/or frameshifts
7879592	hydrogenase nickel insertion protein HypA, degenerate; this region contains one or more premature stops and/or frameshifts; identified by similarity to SP:Q8KX22
7879912	chemotaxis MotB protein; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to SP:P28612
7880421	PrdE protein; this region contains one or more premature stops and/or frameshifts
7880583	PrdD protein; this region contains one or more premature stops and/or frameshifts
7881308	conserved hypothetical protein, degenerate; this region contains one or more premature stops and/or frameshifts
7879915	mannose-specific phosphotransferase system component iiab; this region contains one or more premature stops and/or frameshifts
7879469	beta-glucosidase; this region contains one or more premature stops and/or frameshifts; identified by similarity to GB:CAG73771.1
7878454	transposase, degenerate; this region contains one or more premature stops and/or frameshifts
7879218	ISCpe6, transposase OrfB; this region contains one or more premature stops and/or frameshifts
7878864	DNA repair protein RecO, truncation; comparison of this gene to its homologs suggests this gene has been truncated
7881037	spermidine synthase; this region contains one or more premature stops and/or frameshifts
7880917	putative signaling protein; this gene contains a premature stop which is not the result of sequencing error; identified by similarity to GB:CAL84920.1
7877566	nitroreductase family protein fused to ferredoxin domain; this region contains one or more premature stops and/or frameshifts